Query 011835
Match_columns 476
No_of_seqs 417 out of 3963
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 16:17:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011835.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011835hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3oz2_A Digeranylgeranylglycero 100.0 1.3E-35 4.3E-40 298.0 33.2 343 106-471 3-367 (397)
2 3cgv_A Geranylgeranyl reductas 100.0 3.5E-34 1.2E-38 288.1 33.2 343 107-472 4-368 (397)
3 3atr_A Conserved archaeal prot 100.0 1.8E-32 6.1E-37 280.7 33.8 336 107-466 6-367 (453)
4 3rp8_A Flavoprotein monooxygen 100.0 4.3E-31 1.5E-35 266.8 27.9 307 105-438 21-358 (407)
5 2qa2_A CABE, polyketide oxygen 100.0 4E-29 1.4E-33 258.2 31.4 302 105-434 10-334 (499)
6 2qa1_A PGAE, polyketide oxygen 100.0 4E-29 1.4E-33 258.2 30.5 302 105-434 9-333 (500)
7 3ihg_A RDME; flavoenzyme, anth 100.0 1.5E-28 5E-33 256.9 29.0 311 105-436 3-359 (535)
8 1pn0_A Phenol 2-monooxygenase; 100.0 5.6E-28 1.9E-32 257.4 32.0 310 106-436 7-409 (665)
9 4hb9_A Similarities with proba 100.0 2E-29 6.7E-34 254.4 19.5 312 108-434 2-368 (412)
10 3e1t_A Halogenase; flavoprotei 100.0 1.4E-28 4.8E-33 255.5 24.7 324 105-449 5-368 (512)
11 1k0i_A P-hydroxybenzoate hydro 100.0 6.3E-28 2.1E-32 242.5 28.7 300 108-433 3-333 (394)
12 3nix_A Flavoprotein/dehydrogen 100.0 3.6E-28 1.2E-32 246.3 26.1 289 106-412 4-329 (421)
13 3fmw_A Oxygenase; mithramycin, 100.0 1.4E-28 4.8E-33 257.5 23.3 303 106-435 48-379 (570)
14 3i3l_A Alkylhalidase CMLS; fla 100.0 1.6E-28 5.3E-33 257.6 23.0 320 106-447 22-378 (591)
15 2dkh_A 3-hydroxybenzoate hydro 100.0 8.3E-28 2.8E-32 255.6 27.9 306 106-435 31-399 (639)
16 2x3n_A Probable FAD-dependent 100.0 7.2E-29 2.4E-33 249.8 16.2 305 106-437 5-346 (399)
17 3c96_A Flavin-containing monoo 100.0 1.6E-27 5.5E-32 240.8 24.5 341 107-471 4-396 (410)
18 2gmh_A Electron transfer flavo 100.0 6.8E-27 2.3E-31 245.8 27.6 321 106-448 34-423 (584)
19 3alj_A 2-methyl-3-hydroxypyrid 100.0 1.2E-27 4.2E-32 239.1 18.8 297 107-435 11-335 (379)
20 2r0c_A REBC; flavin adenine di 100.0 9.8E-27 3.4E-31 243.3 26.4 297 106-434 25-365 (549)
21 2xdo_A TETX2 protein; tetracyc 100.0 3.4E-27 1.2E-31 237.5 21.7 306 106-433 25-368 (398)
22 2vou_A 2,6-dihydroxypyridine h 100.0 4.9E-27 1.7E-31 236.2 22.3 144 106-253 4-159 (397)
23 3c4a_A Probable tryptophan hyd 99.9 1E-25 3.6E-30 225.3 18.0 287 108-435 1-316 (381)
24 2pyx_A Tryptophan halogenase; 99.9 1.1E-24 3.7E-29 226.9 25.8 303 106-437 6-402 (526)
25 2aqj_A Tryptophan halogenase, 99.9 4.3E-24 1.5E-28 223.1 27.7 296 106-437 4-386 (538)
26 2weu_A Tryptophan 5-halogenase 99.9 6.5E-24 2.2E-28 220.5 28.3 215 187-436 169-393 (511)
27 2e4g_A Tryptophan halogenase; 99.9 2.7E-23 9.1E-28 217.4 29.4 297 106-437 24-417 (550)
28 3ihm_A Styrene monooxygenase A 99.9 2.1E-21 7E-26 197.1 21.2 274 107-408 22-345 (430)
29 1y56_B Sarcosine oxidase; dehy 99.8 5.5E-17 1.9E-21 161.8 27.5 202 184-407 142-354 (382)
30 1ryi_A Glycine oxidase; flavop 99.8 1.3E-17 4.6E-22 166.2 22.4 193 186-406 159-360 (382)
31 2bry_A NEDD9 interacting prote 99.8 4.7E-18 1.6E-22 175.2 18.2 129 106-249 91-232 (497)
32 2gag_B Heterotetrameric sarcos 99.8 1.2E-16 4E-21 160.6 24.6 197 185-406 168-373 (405)
33 1yvv_A Amine oxidase, flavin-c 99.7 1.3E-16 4.6E-21 156.0 21.3 281 108-413 3-331 (336)
34 3dme_A Conserved exported prot 99.7 3.3E-16 1.1E-20 155.0 23.3 208 185-406 144-368 (369)
35 2gf3_A MSOX, monomeric sarcosi 99.7 4E-16 1.4E-20 155.8 22.3 199 185-406 144-362 (389)
36 3nyc_A D-arginine dehydrogenas 99.7 5.6E-16 1.9E-20 154.1 22.7 196 185-405 148-355 (381)
37 3ps9_A TRNA 5-methylaminomethy 99.7 9.3E-16 3.2E-20 164.3 25.4 193 185-406 411-643 (676)
38 3pvc_A TRNA 5-methylaminomethy 99.7 9.4E-16 3.2E-20 164.4 24.5 116 185-322 406-525 (689)
39 2oln_A NIKD protein; flavoprot 99.7 3.1E-15 1.1E-19 149.9 24.3 64 186-251 148-212 (397)
40 2qcu_A Aerobic glycerol-3-phos 99.7 1.5E-14 5E-19 149.5 26.6 207 186-408 144-372 (501)
41 3da1_A Glycerol-3-phosphate de 99.7 6.5E-15 2.2E-19 153.9 23.4 209 187-410 166-393 (561)
42 2uzz_A N-methyl-L-tryptophan o 99.7 2.2E-15 7.6E-20 149.5 18.5 67 184-252 142-209 (372)
43 3dje_A Fructosyl amine: oxygen 99.6 7.4E-15 2.5E-19 149.2 20.5 67 186-252 156-226 (438)
44 3axb_A Putative oxidoreductase 99.6 3E-14 1E-18 145.1 21.0 209 185-405 175-415 (448)
45 3c4n_A Uncharacterized protein 99.6 1.7E-14 5.8E-19 145.0 18.7 194 106-321 35-291 (405)
46 1c0p_A D-amino acid oxidase; a 99.6 1.9E-13 6.6E-18 135.1 23.2 186 186-410 137-359 (363)
47 3g3e_A D-amino-acid oxidase; F 99.5 3.4E-13 1.2E-17 132.7 20.5 192 186-411 137-336 (351)
48 2rgh_A Alpha-glycerophosphate 99.5 1.5E-12 5.1E-17 136.3 25.6 211 186-409 183-412 (571)
49 3v76_A Flavoprotein; structura 99.5 7.1E-14 2.4E-18 140.5 14.4 137 105-248 25-188 (417)
50 2ywl_A Thioredoxin reductase r 99.5 3.9E-13 1.3E-17 119.1 16.3 108 108-247 2-110 (180)
51 1pj5_A N,N-dimethylglycine oxi 99.5 3.2E-12 1.1E-16 139.9 26.5 66 185-251 145-211 (830)
52 2cul_A Glucose-inhibited divis 99.5 5.4E-13 1.8E-17 123.4 13.5 124 107-250 3-128 (232)
53 2i0z_A NAD(FAD)-utilizing dehy 99.4 1.3E-12 4.4E-17 132.9 16.1 141 106-247 25-191 (447)
54 3ces_A MNMG, tRNA uridine 5-ca 99.4 1.1E-12 3.7E-17 136.8 15.4 140 106-248 27-182 (651)
55 3nlc_A Uncharacterized protein 99.4 1.3E-12 4.3E-17 135.1 15.1 142 105-248 105-278 (549)
56 4dgk_A Phytoene dehydrogenase; 99.4 7.2E-11 2.5E-15 121.8 28.0 57 191-247 221-278 (501)
57 2zxi_A TRNA uridine 5-carboxym 99.4 1.8E-12 6E-17 134.7 15.0 140 106-248 26-181 (637)
58 1y0p_A Fumarate reductase flav 99.4 3.6E-12 1.2E-16 133.7 17.4 144 105-248 124-318 (571)
59 1qo8_A Flavocytochrome C3 fuma 99.4 2.8E-12 9.7E-17 134.3 16.1 145 105-249 119-314 (566)
60 3ka7_A Oxidoreductase; structu 99.4 8.3E-11 2.9E-15 118.6 26.4 56 191-247 196-252 (425)
61 3kkj_A Amine oxidase, flavin-c 99.4 9.2E-12 3.1E-16 116.9 17.9 35 108-142 3-37 (336)
62 1rp0_A ARA6, thiazole biosynth 99.4 1.3E-12 4.6E-17 124.5 11.9 124 106-248 38-192 (284)
63 3qj4_A Renalase; FAD/NAD(P)-bi 99.4 6E-12 2E-16 123.3 16.4 274 108-407 2-340 (342)
64 2gqf_A Hypothetical protein HI 99.4 4E-12 1.4E-16 127.2 15.3 135 107-248 4-169 (401)
65 4fk1_A Putative thioredoxin re 99.4 1.5E-12 5.2E-17 125.4 11.8 113 105-247 4-117 (304)
66 4a9w_A Monooxygenase; baeyer-v 99.4 1.7E-12 5.8E-17 127.4 11.8 129 107-248 3-133 (357)
67 3i6d_A Protoporphyrinogen oxid 99.4 2.6E-11 9E-16 123.8 20.9 186 206-409 248-468 (470)
68 3jsk_A Cypbp37 protein; octame 99.4 3.7E-12 1.3E-16 123.1 12.4 124 106-248 78-252 (344)
69 3ab1_A Ferredoxin--NADP reduct 99.4 4.2E-12 1.4E-16 125.3 13.0 118 106-247 13-131 (360)
70 3nrn_A Uncharacterized protein 99.4 9.4E-11 3.2E-15 118.1 23.2 54 191-247 189-243 (421)
71 3cp8_A TRNA uridine 5-carboxym 99.4 5.3E-12 1.8E-16 131.5 14.2 140 106-248 20-175 (641)
72 4a5l_A Thioredoxin reductase; 99.3 4.5E-12 1.5E-16 122.4 11.7 119 106-247 3-121 (314)
73 1d4d_A Flavocytochrome C fumar 99.3 2.5E-11 8.6E-16 127.1 17.9 143 106-248 125-318 (572)
74 2zbw_A Thioredoxin reductase; 99.3 4.2E-12 1.4E-16 123.9 11.2 117 106-247 4-121 (335)
75 3fbs_A Oxidoreductase; structu 99.3 5.7E-12 1.9E-16 120.5 10.5 109 108-247 3-112 (297)
76 2gjc_A Thiazole biosynthetic e 99.3 1.9E-11 6.5E-16 117.5 13.4 136 106-247 64-239 (326)
77 3lzw_A Ferredoxin--NADP reduct 99.3 1.8E-11 6.1E-16 118.9 12.5 116 107-247 7-123 (332)
78 2q7v_A Thioredoxin reductase; 99.3 1.3E-11 4.5E-16 119.9 10.6 115 106-247 7-123 (325)
79 2q0l_A TRXR, thioredoxin reduc 99.3 1.7E-11 5.7E-16 118.3 11.1 113 108-248 2-115 (311)
80 3f8d_A Thioredoxin reductase ( 99.3 3.9E-11 1.3E-15 116.0 13.3 111 107-247 15-125 (323)
81 4gcm_A TRXR, thioredoxin reduc 99.2 2.4E-11 8.3E-16 117.3 11.5 112 105-247 4-116 (312)
82 3itj_A Thioredoxin reductase 1 99.2 2E-11 6.8E-16 118.9 10.8 118 105-247 20-142 (338)
83 4at0_A 3-ketosteroid-delta4-5a 99.2 3.7E-11 1.3E-15 124.2 13.3 57 192-248 203-265 (510)
84 3gwf_A Cyclohexanone monooxyge 99.2 3.1E-11 1.1E-15 125.3 12.7 137 106-248 7-148 (540)
85 1vdc_A NTR, NADPH dependent th 99.2 1E-11 3.4E-16 121.0 8.1 118 106-248 7-125 (333)
86 2gv8_A Monooxygenase; FMO, FAD 99.2 4.8E-11 1.6E-15 121.3 13.1 140 106-248 5-178 (447)
87 3nks_A Protoporphyrinogen oxid 99.2 1.4E-10 4.6E-15 118.9 16.2 55 192-247 235-290 (477)
88 2vdc_G Glutamate synthase [NAD 99.2 1.3E-12 4.3E-17 132.9 0.9 150 44-249 70-221 (456)
89 3d1c_A Flavin-containing putat 99.2 2E-11 6.7E-16 120.7 9.2 137 107-248 4-144 (369)
90 3k7m_X 6-hydroxy-L-nicotine ox 99.2 1.3E-09 4.3E-14 110.1 22.7 45 201-247 214-259 (431)
91 4ap3_A Steroid monooxygenase; 99.2 5.1E-11 1.7E-15 123.9 12.4 136 105-247 19-159 (549)
92 1w4x_A Phenylacetone monooxyge 99.2 1.3E-10 4.3E-15 121.1 15.3 137 106-249 15-156 (542)
93 3lov_A Protoporphyrinogen oxid 99.2 1.5E-09 5.1E-14 111.1 22.4 189 206-412 249-468 (475)
94 3cty_A Thioredoxin reductase; 99.2 4.7E-11 1.6E-15 115.6 10.2 113 106-248 15-127 (319)
95 1fl2_A Alkyl hydroperoxide red 99.2 4.4E-11 1.5E-15 115.2 9.6 111 108-247 2-115 (310)
96 2ivd_A PPO, PPOX, protoporphyr 99.2 8.4E-10 2.9E-14 113.0 19.1 37 106-142 15-51 (478)
97 3uox_A Otemo; baeyer-villiger 99.2 6.7E-11 2.3E-15 122.9 10.3 136 106-248 8-148 (545)
98 1kf6_A Fumarate reductase flav 99.1 2.2E-10 7.6E-15 120.4 13.0 145 106-250 4-200 (602)
99 1trb_A Thioredoxin reductase; 99.1 7.6E-11 2.6E-15 114.0 8.8 113 106-247 4-116 (320)
100 2xve_A Flavin-containing monoo 99.1 1.7E-10 6E-15 117.7 11.8 140 108-248 3-167 (464)
101 2a87_A TRXR, TR, thioredoxin r 99.1 1.1E-10 3.6E-15 114.0 9.4 113 106-248 13-127 (335)
102 1chu_A Protein (L-aspartate ox 99.1 1.7E-10 5.8E-15 119.8 11.3 144 105-249 6-210 (540)
103 1hyu_A AHPF, alkyl hydroperoxi 99.1 2.1E-10 7.2E-15 118.7 12.0 114 106-248 211-327 (521)
104 2e5v_A L-aspartate oxidase; ar 99.1 3.6E-10 1.2E-14 115.5 13.1 141 109-250 1-179 (472)
105 2vvm_A Monoamine oxidase N; FA 99.1 2.1E-08 7.3E-13 103.1 26.3 56 192-248 256-313 (495)
106 2wdq_A Succinate dehydrogenase 99.1 5.6E-10 1.9E-14 117.0 14.1 145 106-250 6-209 (588)
107 1s3e_A Amine oxidase [flavin-c 99.1 5.9E-09 2E-13 108.0 21.2 44 203-247 224-268 (520)
108 2h88_A Succinate dehydrogenase 99.1 6E-10 2.1E-14 117.1 13.3 144 106-249 17-219 (621)
109 3s5w_A L-ornithine 5-monooxyge 99.1 5.2E-10 1.8E-14 114.2 11.3 139 106-247 29-192 (463)
110 3r9u_A Thioredoxin reductase; 99.0 6.7E-10 2.3E-14 106.9 10.2 112 106-247 3-118 (315)
111 2bs2_A Quinol-fumarate reducta 99.0 1.1E-09 3.8E-14 115.8 12.5 60 190-249 157-222 (660)
112 2yg5_A Putrescine oxidase; oxi 99.0 2.5E-08 8.5E-13 101.3 21.6 37 106-142 4-40 (453)
113 1jnr_A Adenylylsulfate reducta 99.0 1.3E-09 4.5E-14 115.5 12.4 145 106-250 21-221 (643)
114 3klj_A NAD(FAD)-dependent dehy 99.0 4.5E-10 1.6E-14 111.7 7.8 107 106-247 8-116 (385)
115 3gyx_A Adenylylsulfate reducta 99.0 1.5E-09 5.3E-14 114.7 12.0 62 189-250 164-236 (662)
116 2a8x_A Dihydrolipoyl dehydroge 99.0 2.8E-09 9.7E-14 108.7 12.1 135 107-248 3-147 (464)
117 3sx6_A Sulfide-quinone reducta 99.0 7.7E-10 2.6E-14 112.1 7.6 105 108-247 5-112 (437)
118 2bcg_G Secretory pathway GDP d 99.0 4E-08 1.4E-12 99.8 20.3 57 192-249 243-302 (453)
119 1q1r_A Putidaredoxin reductase 98.9 7.2E-10 2.5E-14 112.0 7.0 108 107-247 4-114 (431)
120 1v59_A Dihydrolipoamide dehydr 98.9 2E-09 6.9E-14 110.3 9.7 134 107-248 5-158 (478)
121 1ojt_A Surface protein; redox- 98.9 3.5E-09 1.2E-13 108.6 11.3 133 106-248 5-161 (482)
122 1xhc_A NADH oxidase /nitrite r 98.9 7.4E-10 2.5E-14 109.4 6.1 105 107-247 8-113 (367)
123 1dxl_A Dihydrolipoamide dehydr 98.9 1.9E-09 6.6E-14 110.2 9.4 135 106-248 5-152 (470)
124 4gut_A Lysine-specific histone 98.9 3E-08 1E-12 106.7 18.9 42 204-246 542-584 (776)
125 3urh_A Dihydrolipoyl dehydroge 98.9 4.6E-09 1.6E-13 107.9 12.0 138 106-247 24-170 (491)
126 3oc4_A Oxidoreductase, pyridin 98.9 2.4E-09 8E-14 109.0 9.1 108 108-247 3-115 (452)
127 3qfa_A Thioredoxin reductase 1 98.9 2.8E-09 9.7E-14 110.2 9.8 138 106-247 31-185 (519)
128 3o0h_A Glutathione reductase; 98.9 3.7E-09 1.3E-13 108.5 10.4 135 105-247 24-166 (484)
129 1ebd_A E3BD, dihydrolipoamide 98.9 4.8E-09 1.7E-13 106.7 11.2 131 107-247 3-145 (455)
130 3l8k_A Dihydrolipoyl dehydroge 98.9 2.3E-09 7.9E-14 109.5 8.7 128 107-247 4-144 (466)
131 3lxd_A FAD-dependent pyridine 98.9 1.2E-09 3.9E-14 110.0 6.2 109 106-247 8-119 (415)
132 3dgz_A Thioredoxin reductase 2 98.9 2.2E-09 7.4E-14 110.3 8.0 35 106-140 5-39 (488)
133 3lad_A Dihydrolipoamide dehydr 98.9 6.3E-09 2.2E-13 106.5 11.4 138 106-247 2-154 (476)
134 1gte_A Dihydropyrimidine dehyd 98.9 1.4E-10 4.8E-15 129.2 -2.1 155 44-246 127-286 (1025)
135 4b1b_A TRXR, thioredoxin reduc 98.9 1.1E-08 3.7E-13 105.8 12.1 127 107-248 42-198 (542)
136 3hyw_A Sulfide-quinone reducta 98.9 7E-10 2.4E-14 112.1 3.1 103 109-246 4-108 (430)
137 3kd9_A Coenzyme A disulfide re 98.8 6.1E-09 2.1E-13 105.8 9.5 106 107-247 3-114 (449)
138 3h28_A Sulfide-quinone reducta 98.8 9.8E-10 3.4E-14 111.0 3.5 105 108-247 3-109 (430)
139 3ef6_A Toluene 1,2-dioxygenase 98.8 3E-09 1E-13 106.8 6.9 105 108-247 3-111 (410)
140 2qae_A Lipoamide, dihydrolipoy 98.8 1.2E-08 4E-13 104.2 11.4 133 107-247 2-148 (468)
141 3cgb_A Pyridine nucleotide-dis 98.8 6.9E-09 2.3E-13 106.3 9.5 109 107-247 36-152 (480)
142 1zmd_A Dihydrolipoyl dehydroge 98.8 1.5E-08 5.3E-13 103.5 11.5 134 106-247 5-152 (474)
143 1nhp_A NADH peroxidase; oxidor 98.8 7E-09 2.4E-13 105.3 8.8 108 108-247 1-115 (447)
144 2v3a_A Rubredoxin reductase; a 98.8 1.6E-08 5.5E-13 100.5 11.1 98 108-248 146-244 (384)
145 2cdu_A NADPH oxidase; flavoenz 98.8 8.1E-09 2.8E-13 105.0 9.1 110 108-247 1-117 (452)
146 4dna_A Probable glutathione re 98.8 8.1E-09 2.8E-13 105.3 9.1 134 106-247 4-145 (463)
147 2bc0_A NADH oxidase; flavoprot 98.8 4.2E-09 1.4E-13 108.2 6.8 109 107-247 35-149 (490)
148 3ics_A Coenzyme A-disulfide re 98.8 1.1E-08 3.8E-13 107.6 9.9 111 106-247 35-152 (588)
149 3dgh_A TRXR-1, thioredoxin red 98.8 1E-08 3.6E-13 105.1 9.3 34 106-139 8-41 (483)
150 1zk7_A HGII, reductase, mercur 98.8 4.6E-08 1.6E-12 99.8 13.9 132 106-247 3-150 (467)
151 3fg2_P Putative rubredoxin red 98.8 7.8E-09 2.7E-13 103.5 7.8 106 108-247 2-110 (404)
152 3vrd_B FCCB subunit, flavocyto 98.8 9.7E-09 3.3E-13 102.6 8.5 103 109-247 4-108 (401)
153 4gde_A UDP-galactopyranose mut 98.8 7.7E-09 2.6E-13 106.7 7.9 51 191-244 222-273 (513)
154 2gqw_A Ferredoxin reductase; f 98.8 3.8E-09 1.3E-13 106.0 5.4 104 106-247 6-113 (408)
155 3iwa_A FAD-dependent pyridine 98.8 1.6E-08 5.5E-13 103.4 10.0 113 108-247 4-125 (472)
156 2hqm_A GR, grase, glutathione 98.8 3.2E-08 1.1E-12 101.3 12.3 135 106-247 10-160 (479)
157 3h8l_A NADH oxidase; membrane 98.8 2.1E-09 7.1E-14 107.9 3.2 105 108-247 2-113 (409)
158 2yqu_A 2-oxoglutarate dehydrog 98.8 2.8E-08 9.4E-13 101.1 11.2 97 108-248 168-265 (455)
159 3dk9_A Grase, GR, glutathione 98.8 2.4E-08 8.1E-13 102.3 10.8 131 106-247 19-160 (478)
160 3p1w_A Rabgdi protein; GDI RAB 98.8 4.5E-08 1.6E-12 99.0 12.6 56 191-246 256-313 (475)
161 1d5t_A Guanine nucleotide diss 98.7 4.2E-07 1.4E-11 91.7 19.1 58 191-249 234-292 (433)
162 1y56_A Hypothetical protein PH 98.7 1.4E-08 4.9E-13 104.2 8.3 110 106-247 107-219 (493)
163 2yqu_A 2-oxoglutarate dehydrog 98.7 2.5E-08 8.5E-13 101.4 9.9 129 108-247 2-141 (455)
164 1ges_A Glutathione reductase; 98.7 6.7E-08 2.3E-12 98.1 12.7 98 108-248 168-266 (450)
165 3fg2_P Putative rubredoxin red 98.7 7.7E-08 2.6E-12 96.2 12.9 99 108-248 143-242 (404)
166 3lxd_A FAD-dependent pyridine 98.7 8.3E-08 2.9E-12 96.3 12.8 99 108-248 153-252 (415)
167 2v3a_A Rubredoxin reductase; a 98.7 1.5E-08 5E-13 100.8 7.1 106 107-247 4-113 (384)
168 3ntd_A FAD-dependent pyridine 98.7 2.4E-08 8.2E-13 104.5 9.0 109 108-247 2-117 (565)
169 3ic9_A Dihydrolipoamide dehydr 98.7 1.1E-08 3.7E-13 105.2 5.8 35 106-140 7-41 (492)
170 2r9z_A Glutathione amide reduc 98.7 5.3E-08 1.8E-12 99.2 10.8 128 107-247 4-142 (463)
171 4b63_A L-ornithine N5 monooxyg 98.7 2.2E-08 7.4E-13 103.1 7.9 138 105-245 37-212 (501)
172 1xdi_A RV3303C-LPDA; reductase 98.7 5.7E-08 1.9E-12 100.0 11.0 134 108-247 3-156 (499)
173 1lvl_A Dihydrolipoamide dehydr 98.7 7.3E-08 2.5E-12 98.1 11.7 34 106-139 4-37 (458)
174 2eq6_A Pyruvate dehydrogenase 98.7 1.3E-07 4.3E-12 96.5 13.4 97 108-248 170-272 (464)
175 1ges_A Glutathione reductase; 98.7 6.6E-08 2.2E-12 98.2 11.0 130 106-247 3-143 (450)
176 1fec_A Trypanothione reductase 98.7 6.7E-08 2.3E-12 99.2 10.7 32 107-138 3-35 (490)
177 2gag_A Heterotetrameric sarcos 98.7 5E-08 1.7E-12 108.0 10.1 110 106-247 127-253 (965)
178 1q1r_A Putidaredoxin reductase 98.7 1.4E-07 4.9E-12 95.1 12.5 98 108-247 150-250 (431)
179 2r9z_A Glutathione amide reduc 98.6 2E-07 6.7E-12 95.0 13.4 97 108-248 167-265 (463)
180 3g5s_A Methylenetetrahydrofola 98.6 3.9E-08 1.3E-12 95.6 7.6 112 108-248 2-138 (443)
181 2eq6_A Pyruvate dehydrogenase 98.6 5.7E-08 2E-12 99.0 9.4 34 107-140 6-39 (464)
182 1onf_A GR, grase, glutathione 98.6 2.9E-08 1E-12 102.2 7.2 34 107-140 2-35 (500)
183 1mo9_A ORF3; nucleotide bindin 98.6 5.3E-08 1.8E-12 100.8 8.9 127 106-247 42-186 (523)
184 1m6i_A Programmed cell death p 98.6 1.2E-08 4E-13 104.9 3.7 131 106-248 10-145 (493)
185 1ebd_A E3BD, dihydrolipoamide 98.6 2.5E-07 8.6E-12 94.0 13.5 97 108-248 171-271 (455)
186 4eqs_A Coenzyme A disulfide re 98.6 4.8E-08 1.6E-12 98.7 8.0 108 109-247 2-116 (437)
187 1onf_A GR, grase, glutathione 98.6 2.2E-07 7.6E-12 95.6 13.1 98 108-248 177-276 (500)
188 1nhp_A NADH peroxidase; oxidor 98.6 1.3E-07 4.6E-12 95.8 11.1 98 107-248 149-247 (447)
189 2x8g_A Thioredoxin glutathione 98.6 1.9E-07 6.6E-12 98.2 12.6 34 106-139 106-139 (598)
190 3ef6_A Toluene 1,2-dioxygenase 98.6 9.9E-08 3.4E-12 95.6 9.7 98 108-248 144-242 (410)
191 2hqm_A GR, grase, glutathione 98.6 2.6E-07 8.8E-12 94.5 12.9 98 108-248 186-286 (479)
192 4g6h_A Rotenone-insensitive NA 98.6 2.6E-08 8.9E-13 102.4 5.3 109 106-247 41-169 (502)
193 1v59_A Dihydrolipoamide dehydr 98.6 3.8E-07 1.3E-11 93.3 13.9 96 108-247 184-287 (478)
194 2wpf_A Trypanothione reductase 98.6 2.9E-07 9.8E-12 94.6 12.7 98 108-248 192-293 (495)
195 1fec_A Trypanothione reductase 98.6 2.8E-07 9.6E-12 94.5 12.3 98 108-248 188-289 (490)
196 1mo9_A ORF3; nucleotide bindin 98.6 3.9E-07 1.3E-11 94.2 13.2 99 108-249 215-318 (523)
197 2wpf_A Trypanothione reductase 98.6 1.2E-07 4E-12 97.5 9.1 33 106-138 6-39 (495)
198 2gqw_A Ferredoxin reductase; f 98.6 3.3E-07 1.1E-11 91.7 12.1 93 108-247 146-239 (408)
199 1zmd_A Dihydrolipoyl dehydroge 98.5 6.4E-07 2.2E-11 91.5 13.4 99 108-248 179-283 (474)
200 1ojt_A Surface protein; redox- 98.5 3.1E-07 1E-11 94.1 10.9 97 108-248 186-287 (482)
201 2z3y_A Lysine-specific histone 98.5 2.5E-05 8.7E-10 82.9 25.9 37 105-141 105-141 (662)
202 3iwa_A FAD-dependent pyridine 98.5 5.2E-07 1.8E-11 92.1 12.4 98 108-248 160-259 (472)
203 2cdu_A NADPH oxidase; flavoenz 98.5 4.6E-07 1.6E-11 91.9 11.3 98 108-248 150-248 (452)
204 1xdi_A RV3303C-LPDA; reductase 98.5 7.6E-07 2.6E-11 91.5 13.0 97 108-248 183-280 (499)
205 2a8x_A Dihydrolipoyl dehydroge 98.5 8.1E-07 2.8E-11 90.4 13.0 97 108-248 172-272 (464)
206 3o0h_A Glutathione reductase; 98.5 6.8E-07 2.3E-11 91.5 12.4 97 108-248 192-289 (484)
207 3k30_A Histamine dehydrogenase 98.5 3.9E-08 1.3E-12 105.2 3.0 98 105-247 389-488 (690)
208 3oc4_A Oxidoreductase, pyridin 98.5 6.7E-07 2.3E-11 90.8 11.9 96 108-247 148-244 (452)
209 2qae_A Lipoamide, dihydrolipoy 98.5 9.8E-07 3.4E-11 89.9 13.2 97 108-248 175-277 (468)
210 1m6i_A Programmed cell death p 98.5 7.5E-07 2.6E-11 91.4 12.2 98 108-248 181-283 (493)
211 3fpz_A Thiazole biosynthetic e 98.5 2.3E-07 7.8E-12 89.9 7.8 37 106-142 64-102 (326)
212 1lvl_A Dihydrolipoamide dehydr 98.5 4.9E-07 1.7E-11 91.9 10.6 95 108-248 172-269 (458)
213 4dna_A Probable glutathione re 98.5 1E-06 3.6E-11 89.6 12.9 98 107-248 170-269 (463)
214 1trb_A Thioredoxin reductase; 98.5 8.3E-07 2.8E-11 85.4 11.6 94 108-246 146-246 (320)
215 3urh_A Dihydrolipoyl dehydroge 98.5 1.4E-06 4.9E-11 89.3 13.8 96 108-247 199-300 (491)
216 1dxl_A Dihydrolipoamide dehydr 98.5 7.4E-07 2.5E-11 90.9 11.6 97 108-248 178-280 (470)
217 2bc0_A NADH oxidase; flavoprot 98.5 6.1E-07 2.1E-11 92.0 11.0 96 108-247 195-291 (490)
218 3ntd_A FAD-dependent pyridine 98.5 1.1E-06 3.7E-11 91.8 13.1 98 108-248 152-268 (565)
219 1lqt_A FPRA; NADP+ derivative, 98.4 2E-08 6.7E-13 102.1 -0.7 104 107-253 3-114 (456)
220 4b1b_A TRXR, thioredoxin reduc 98.4 1.4E-06 4.7E-11 90.1 13.1 95 108-247 224-319 (542)
221 1ps9_A 2,4-dienoyl-COA reducta 98.4 1.8E-07 6.3E-12 99.7 6.5 95 105-247 371-467 (671)
222 3cgb_A Pyridine nucleotide-dis 98.4 1.1E-06 3.7E-11 89.9 11.9 96 108-248 187-283 (480)
223 1cjc_A Protein (adrenodoxin re 98.4 4.5E-08 1.5E-12 99.5 1.1 99 106-247 5-106 (460)
224 3dk9_A Grase, GR, glutathione 98.4 2.6E-06 8.9E-11 87.0 14.2 97 108-247 188-293 (478)
225 3lad_A Dihydrolipoamide dehydr 98.4 1.9E-06 6.4E-11 88.1 12.9 96 108-247 181-280 (476)
226 1zk7_A HGII, reductase, mercur 98.4 2.5E-06 8.4E-11 86.9 12.8 95 108-248 177-272 (467)
227 3ic9_A Dihydrolipoamide dehydr 98.4 2.8E-06 9.6E-11 87.1 13.1 95 108-247 175-274 (492)
228 2zbw_A Thioredoxin reductase; 98.4 2.1E-06 7.3E-11 83.1 11.6 93 108-246 153-251 (335)
229 1xhc_A NADH oxidase /nitrite r 98.3 1.5E-06 5.1E-11 85.6 10.4 91 108-248 144-235 (367)
230 3dgh_A TRXR-1, thioredoxin red 98.3 2.6E-06 9.1E-11 87.1 12.1 96 108-247 188-289 (483)
231 3ics_A Coenzyme A-disulfide re 98.3 2.7E-06 9.3E-11 89.2 12.4 95 108-248 188-283 (588)
232 3ab1_A Ferredoxin--NADP reduct 98.3 1.8E-06 6.1E-11 84.7 9.6 95 108-247 164-263 (360)
233 1o94_A Tmadh, trimethylamine d 98.3 3.1E-07 1.1E-11 98.7 3.8 38 105-142 387-424 (729)
234 3dgz_A Thioredoxin reductase 2 98.3 5.8E-06 2E-10 84.7 12.9 96 108-247 186-287 (488)
235 4eqs_A Coenzyme A disulfide re 98.3 1.9E-06 6.4E-11 87.0 9.1 92 108-247 148-240 (437)
236 3itj_A Thioredoxin reductase 1 98.3 4.4E-06 1.5E-10 80.7 11.5 90 108-246 174-270 (338)
237 3d1c_A Flavin-containing putat 98.2 3.9E-06 1.3E-10 82.3 10.5 103 108-247 167-272 (369)
238 3cty_A Thioredoxin reductase; 98.2 7E-06 2.4E-10 78.9 10.3 90 108-246 156-251 (319)
239 3q9t_A Choline dehydrogenase a 98.2 2.2E-05 7.5E-10 81.7 14.5 37 105-141 4-41 (577)
240 3kd9_A Coenzyme A disulfide re 98.2 5.9E-06 2E-10 83.6 10.1 95 108-247 149-244 (449)
241 1fl2_A Alkyl hydroperoxide red 98.2 6.6E-06 2.2E-10 78.6 9.9 89 108-245 145-240 (310)
242 4g6h_A Rotenone-insensitive NA 98.1 1.1E-05 3.7E-10 82.9 11.3 96 108-247 218-332 (502)
243 2q0l_A TRXR, thioredoxin reduc 98.1 1.1E-05 3.8E-10 77.1 10.8 90 108-246 144-240 (311)
244 3s5w_A L-ornithine 5-monooxyge 98.1 2.8E-05 9.6E-10 78.9 13.6 128 107-247 227-377 (463)
245 2e1m_A L-glutamate oxidase; L- 98.1 3.6E-06 1.2E-10 82.7 6.6 39 105-143 42-81 (376)
246 3hdq_A UDP-galactopyranose mut 98.1 3.7E-06 1.3E-10 83.3 6.1 38 105-142 27-64 (397)
247 2x8g_A Thioredoxin glutathione 98.0 3.8E-05 1.3E-09 80.7 13.9 96 108-247 287-395 (598)
248 3r9u_A Thioredoxin reductase; 98.0 1.1E-05 3.8E-10 77.0 9.0 90 108-245 148-242 (315)
249 3l8k_A Dihydrolipoyl dehydroge 98.0 1.6E-05 5.6E-10 80.8 10.8 95 108-248 173-273 (466)
250 2b9w_A Putative aminooxidase; 98.0 4.3E-06 1.5E-10 83.9 6.2 36 106-141 5-41 (424)
251 3qfa_A Thioredoxin reductase 1 98.0 4.4E-05 1.5E-09 78.7 13.9 96 108-247 211-315 (519)
252 3f8d_A Thioredoxin reductase ( 98.0 2E-05 7E-10 75.4 10.7 90 108-247 155-251 (323)
253 1rsg_A FMS1 protein; FAD bindi 98.0 3.4E-06 1.2E-10 87.0 5.3 37 106-142 7-44 (516)
254 2q7v_A Thioredoxin reductase; 98.0 2.1E-05 7.1E-10 75.7 10.5 88 108-245 153-247 (325)
255 3klj_A NAD(FAD)-dependent dehy 98.0 2.3E-06 7.8E-11 84.9 3.6 84 108-247 147-231 (385)
256 2jae_A L-amino acid oxidase; o 98.0 5.4E-06 1.8E-10 84.9 6.4 36 106-141 10-45 (489)
257 1v0j_A UDP-galactopyranose mut 98.0 5E-06 1.7E-10 82.8 5.9 36 106-141 6-42 (399)
258 3fbs_A Oxidoreductase; structu 98.0 8.5E-06 2.9E-10 77.1 6.5 84 108-246 142-225 (297)
259 3k30_A Histamine dehydrogenase 98.0 8E-06 2.7E-10 87.3 6.8 93 108-245 524-622 (690)
260 1vdc_A NTR, NADPH dependent th 98.0 3.6E-05 1.2E-09 74.2 10.8 90 108-246 160-258 (333)
261 1i8t_A UDP-galactopyranose mut 97.9 6.8E-06 2.3E-10 80.9 5.0 34 108-141 2-35 (367)
262 3lzw_A Ferredoxin--NADP reduct 97.9 4.5E-05 1.5E-09 73.3 10.4 89 108-246 155-249 (332)
263 1sez_A Protoporphyrinogen oxid 97.8 1.2E-05 4.1E-10 82.6 5.7 37 107-143 13-49 (504)
264 2iid_A L-amino-acid oxidase; f 97.8 1.6E-05 5.4E-10 81.6 6.1 36 106-141 32-67 (498)
265 1hyu_A AHPF, alkyl hydroperoxi 97.8 5.5E-05 1.9E-09 78.0 10.1 89 108-245 356-451 (521)
266 2a87_A TRXR, TR, thioredoxin r 97.8 4.1E-05 1.4E-09 74.1 8.4 89 108-245 156-250 (335)
267 4dsg_A UDP-galactopyranose mut 97.8 1.8E-05 6.1E-10 80.9 5.8 37 106-142 8-45 (484)
268 2bi7_A UDP-galactopyranose mut 97.8 1.6E-05 5.5E-10 78.7 5.1 35 108-142 4-38 (384)
269 3pl8_A Pyranose 2-oxidase; sub 97.8 1.9E-05 6.4E-10 83.1 5.5 38 106-143 45-82 (623)
270 2gag_A Heterotetrameric sarcos 97.7 6.7E-05 2.3E-09 83.0 9.8 88 108-247 285-383 (965)
271 1kdg_A CDH, cellobiose dehydro 97.7 3.1E-05 1E-09 80.4 5.3 36 105-140 5-40 (546)
272 3gwf_A Cyclohexanone monooxyge 97.7 7.1E-05 2.4E-09 77.4 7.7 35 107-141 178-212 (540)
273 1cjc_A Protein (adrenodoxin re 97.6 0.0004 1.4E-08 70.3 12.6 129 108-247 146-333 (460)
274 1b37_A Protein (polyamine oxid 97.6 5.3E-05 1.8E-09 77.1 5.9 42 205-247 228-270 (472)
275 4a5l_A Thioredoxin reductase; 97.5 0.0002 7E-09 68.2 8.6 90 108-245 153-248 (314)
276 1gte_A Dihydropyrimidine dehyd 97.5 0.00055 1.9E-08 76.3 13.1 92 109-247 334-442 (1025)
277 3t37_A Probable dehydrogenase; 97.5 5E-05 1.7E-09 78.4 4.2 35 106-140 16-51 (526)
278 1lqt_A FPRA; NADP+ derivative, 97.5 0.00037 1.3E-08 70.5 10.3 130 108-247 148-326 (456)
279 2xag_A Lysine-specific histone 97.5 9.1E-05 3.1E-09 80.3 5.9 37 106-142 277-313 (852)
280 1o94_A Tmadh, trimethylamine d 97.5 0.00011 3.7E-09 78.9 6.2 92 108-245 529-644 (729)
281 2vdc_G Glutamate synthase [NAD 97.5 0.00022 7.4E-09 72.2 8.0 34 107-140 264-298 (456)
282 1ju2_A HydroxynitrIle lyase; f 97.5 4.5E-05 1.5E-09 78.9 3.0 34 106-140 25-58 (536)
283 1ps9_A 2,4-dienoyl-COA reducta 97.4 0.00036 1.2E-08 74.2 9.3 48 195-246 577-627 (671)
284 3uox_A Otemo; baeyer-villiger 97.4 3.6E-05 1.2E-09 79.7 1.3 35 107-141 185-219 (545)
285 2gv8_A Monooxygenase; FMO, FAD 97.4 0.00027 9.1E-09 71.3 7.4 78 108-247 213-292 (447)
286 3qvp_A Glucose oxidase; oxidor 97.3 0.00012 4.2E-09 76.0 4.7 36 105-140 17-53 (583)
287 2xve_A Flavin-containing monoo 97.3 0.00048 1.6E-08 69.8 8.3 79 108-247 198-276 (464)
288 1n4w_A CHOD, cholesterol oxida 97.3 0.00018 6.1E-09 73.8 4.9 35 106-140 4-38 (504)
289 3h8l_A NADH oxidase; membrane 97.3 0.00078 2.7E-08 67.0 9.4 50 192-246 219-269 (409)
290 1coy_A Cholesterol oxidase; ox 97.2 0.00026 8.9E-09 72.6 5.6 35 106-140 10-44 (507)
291 1gpe_A Protein (glucose oxidas 97.2 0.0002 7E-09 74.7 4.9 36 105-140 22-58 (587)
292 4a9w_A Monooxygenase; baeyer-v 97.2 0.00035 1.2E-08 67.6 5.9 32 108-140 164-195 (357)
293 4ap3_A Steroid monooxygenase; 97.2 0.00061 2.1E-08 70.6 8.0 35 107-141 191-225 (549)
294 3ayj_A Pro-enzyme of L-phenyla 97.2 0.00021 7.1E-09 75.6 4.1 36 107-142 56-100 (721)
295 3fim_B ARYL-alcohol oxidase; A 97.1 0.00015 5.1E-09 75.2 2.8 34 107-140 2-36 (566)
296 2jbv_A Choline oxidase; alcoho 97.1 0.00029 9.9E-09 73.0 4.8 35 106-140 12-47 (546)
297 4gcm_A TRXR, thioredoxin reduc 97.1 0.0035 1.2E-07 59.6 11.3 33 108-140 146-178 (312)
298 3h28_A Sulfide-quinone reducta 97.0 0.00098 3.4E-08 66.8 6.6 50 193-247 202-256 (430)
299 3sx6_A Sulfide-quinone reducta 96.9 0.0014 4.9E-08 65.7 7.8 95 109-246 151-268 (437)
300 4fk1_A Putative thioredoxin re 96.9 0.0013 4.4E-08 62.5 6.3 87 108-245 147-234 (304)
301 1vg0_A RAB proteins geranylger 96.6 0.002 6.9E-08 67.2 6.1 54 191-244 378-434 (650)
302 2g1u_A Hypothetical protein TM 96.0 0.0072 2.5E-07 51.1 5.0 34 107-140 19-52 (155)
303 3fwz_A Inner membrane protein 95.9 0.011 3.8E-07 48.9 5.7 33 108-140 8-40 (140)
304 1lss_A TRK system potassium up 95.8 0.0086 2.9E-07 49.2 4.8 33 108-140 5-37 (140)
305 3llv_A Exopolyphosphatase-rela 95.6 0.013 4.6E-07 48.4 4.9 33 108-140 7-39 (141)
306 1w4x_A Phenylacetone monooxyge 95.5 0.033 1.1E-06 57.3 8.9 36 107-142 186-221 (542)
307 1f0y_A HCDH, L-3-hydroxyacyl-C 95.3 0.018 6.3E-07 54.4 5.6 33 108-140 16-48 (302)
308 1id1_A Putative potassium chan 95.3 0.021 7E-07 48.0 5.3 33 108-140 4-36 (153)
309 1y56_A Hypothetical protein PH 95.3 0.023 7.9E-07 57.8 6.6 49 199-248 265-314 (493)
310 4b63_A L-ornithine N5 monooxyg 95.2 0.16 5.5E-06 51.6 12.7 34 108-141 247-282 (501)
311 3ic5_A Putative saccharopine d 95.2 0.02 6.9E-07 45.3 4.6 33 108-140 6-39 (118)
312 2hmt_A YUAA protein; RCK, KTN, 94.7 0.026 8.9E-07 46.4 4.3 32 109-140 8-39 (144)
313 3c85_A Putative glutathione-re 94.7 0.027 9.3E-07 48.8 4.6 33 108-140 40-73 (183)
314 3hyw_A Sulfide-quinone reducta 94.7 0.088 3E-06 52.4 8.9 52 193-247 202-256 (430)
315 1pzg_A LDH, lactate dehydrogen 94.5 0.044 1.5E-06 52.6 5.7 35 106-140 8-43 (331)
316 3vrd_B FCCB subunit, flavocyto 94.3 0.025 8.5E-07 55.7 3.8 51 194-245 205-256 (401)
317 3l4b_C TRKA K+ channel protien 94.3 0.035 1.2E-06 49.7 4.4 32 109-140 2-33 (218)
318 3ado_A Lambda-crystallin; L-gu 94.2 0.045 1.5E-06 52.0 5.1 33 108-140 7-39 (319)
319 3dfz_A SIRC, precorrin-2 dehyd 94.2 0.046 1.6E-06 49.1 4.9 35 106-140 30-64 (223)
320 4dio_A NAD(P) transhydrogenase 94.0 0.055 1.9E-06 53.0 5.4 34 107-140 190-223 (405)
321 4e12_A Diketoreductase; oxidor 93.6 0.068 2.3E-06 50.0 5.0 33 108-140 5-37 (283)
322 3p2y_A Alanine dehydrogenase/p 93.4 0.065 2.2E-06 52.0 4.7 34 107-140 184-217 (381)
323 3i83_A 2-dehydropantoate 2-red 93.4 0.074 2.5E-06 50.7 5.2 33 108-140 3-35 (320)
324 1kyq_A Met8P, siroheme biosynt 93.3 0.041 1.4E-06 51.0 3.0 34 107-140 13-46 (274)
325 1jw9_B Molybdopterin biosynthe 93.3 0.074 2.5E-06 48.7 4.8 33 108-140 32-65 (249)
326 1ks9_A KPA reductase;, 2-dehyd 93.2 0.088 3E-06 49.1 5.2 32 109-140 2-33 (291)
327 2raf_A Putative dinucleotide-b 93.1 0.1 3.6E-06 46.3 5.4 35 107-141 19-53 (209)
328 1lld_A L-lactate dehydrogenase 93.1 0.089 3E-06 50.0 5.1 33 108-140 8-42 (319)
329 4g65_A TRK system potassium up 93.1 0.038 1.3E-06 55.6 2.6 34 107-140 3-36 (461)
330 2y0c_A BCEC, UDP-glucose dehyd 93.1 0.086 2.9E-06 53.2 5.2 34 107-140 8-41 (478)
331 3k96_A Glycerol-3-phosphate de 93.1 0.095 3.2E-06 50.8 5.3 34 107-140 29-62 (356)
332 2dpo_A L-gulonate 3-dehydrogen 93.0 0.096 3.3E-06 49.9 5.2 33 108-140 7-39 (319)
333 3lk7_A UDP-N-acetylmuramoylala 93.0 0.081 2.8E-06 53.1 4.9 33 108-140 10-42 (451)
334 3tl2_A Malate dehydrogenase; c 92.9 0.11 3.7E-06 49.4 5.4 33 107-139 8-41 (315)
335 2ew2_A 2-dehydropantoate 2-red 92.9 0.099 3.4E-06 49.4 5.1 33 108-140 4-36 (316)
336 3ghy_A Ketopantoate reductase 92.9 0.1 3.5E-06 50.1 5.2 32 108-139 4-35 (335)
337 3hn2_A 2-dehydropantoate 2-red 92.9 0.089 3E-06 49.9 4.7 33 108-140 3-35 (312)
338 2xag_A Lysine-specific histone 92.9 2.1 7.1E-05 46.3 15.9 41 205-246 581-628 (852)
339 2x5o_A UDP-N-acetylmuramoylala 92.9 0.061 2.1E-06 53.8 3.7 33 108-140 6-38 (439)
340 3vtf_A UDP-glucose 6-dehydroge 92.6 0.13 4.6E-06 51.0 5.7 35 106-140 20-54 (444)
341 1x13_A NAD(P) transhydrogenase 92.5 0.11 3.6E-06 51.3 4.9 34 107-140 172-205 (401)
342 3pqe_A L-LDH, L-lactate dehydr 92.5 0.14 4.6E-06 48.9 5.4 35 106-140 4-40 (326)
343 3gg2_A Sugar dehydrogenase, UD 92.4 0.12 4.1E-06 51.8 5.1 33 108-140 3-35 (450)
344 1l7d_A Nicotinamide nucleotide 92.4 0.12 4.2E-06 50.5 5.1 34 107-140 172-205 (384)
345 3g0o_A 3-hydroxyisobutyrate de 92.3 0.13 4.6E-06 48.4 5.2 33 108-140 8-40 (303)
346 2qyt_A 2-dehydropantoate 2-red 92.3 0.098 3.4E-06 49.5 4.2 32 107-138 8-45 (317)
347 1pjc_A Protein (L-alanine dehy 92.2 0.12 4.1E-06 50.2 4.8 33 108-140 168-200 (361)
348 1y6j_A L-lactate dehydrogenase 92.2 0.15 5.1E-06 48.5 5.3 34 107-140 7-42 (318)
349 2v6b_A L-LDH, L-lactate dehydr 92.1 0.14 4.9E-06 48.3 5.1 32 109-140 2-35 (304)
350 3l9w_A Glutathione-regulated p 92.1 0.13 4.6E-06 50.8 5.0 33 108-140 5-37 (413)
351 3doj_A AT3G25530, dehydrogenas 92.1 0.16 5.5E-06 48.1 5.4 36 106-141 20-55 (310)
352 3g17_A Similar to 2-dehydropan 92.0 0.11 3.9E-06 48.7 4.2 33 108-140 3-35 (294)
353 2ewd_A Lactate dehydrogenase,; 92.0 0.17 5.7E-06 48.1 5.4 33 108-140 5-38 (317)
354 3oj0_A Glutr, glutamyl-tRNA re 92.0 0.053 1.8E-06 44.9 1.6 33 108-140 22-54 (144)
355 3g79_A NDP-N-acetyl-D-galactos 91.9 0.15 5.1E-06 51.3 5.2 34 108-141 19-54 (478)
356 2hjr_A Malate dehydrogenase; m 91.8 0.17 5.8E-06 48.4 5.2 33 108-140 15-48 (328)
357 4a7p_A UDP-glucose dehydrogena 91.8 0.17 5.8E-06 50.5 5.4 35 107-141 8-42 (446)
358 3eag_A UDP-N-acetylmuramate:L- 91.8 0.14 4.8E-06 48.9 4.7 33 108-140 5-38 (326)
359 1sez_A Protoporphyrinogen oxid 91.8 1.9 6.6E-05 43.3 13.5 36 371-412 461-496 (504)
360 1bg6_A N-(1-D-carboxylethyl)-L 91.7 0.17 5.9E-06 48.7 5.2 33 108-140 5-37 (359)
361 3k6j_A Protein F01G10.3, confi 91.7 0.2 6.9E-06 50.0 5.7 34 108-141 55-88 (460)
362 1mv8_A GMD, GDP-mannose 6-dehy 91.5 0.15 5E-06 51.0 4.6 32 109-140 2-33 (436)
363 1z82_A Glycerol-3-phosphate de 91.5 0.18 6.2E-06 48.2 5.1 33 108-140 15-47 (335)
364 3mog_A Probable 3-hydroxybutyr 91.5 0.19 6.5E-06 50.7 5.5 33 108-140 6-38 (483)
365 2a9f_A Putative malic enzyme ( 91.4 0.17 5.7E-06 49.1 4.7 34 106-139 187-221 (398)
366 3l6d_A Putative oxidoreductase 91.4 0.28 9.5E-06 46.3 6.2 34 107-140 9-42 (306)
367 3hwr_A 2-dehydropantoate 2-red 91.4 0.18 6.2E-06 47.9 4.9 33 107-140 19-51 (318)
368 3pid_A UDP-glucose 6-dehydroge 91.4 0.17 5.9E-06 50.1 4.9 33 107-140 36-68 (432)
369 1t2d_A LDH-P, L-lactate dehydr 91.4 0.22 7.6E-06 47.4 5.5 33 108-140 5-38 (322)
370 1zej_A HBD-9, 3-hydroxyacyl-CO 91.3 0.2 6.7E-06 47.0 5.0 33 107-140 12-44 (293)
371 1zcj_A Peroxisomal bifunctiona 91.3 0.16 5.5E-06 51.0 4.7 33 108-140 38-70 (463)
372 3pef_A 6-phosphogluconate dehy 91.3 0.19 6.6E-06 46.9 5.0 34 108-141 2-35 (287)
373 3dtt_A NADP oxidoreductase; st 91.1 0.21 7.2E-06 45.5 4.9 34 107-140 19-52 (245)
374 2eez_A Alanine dehydrogenase; 91.1 0.19 6.4E-06 48.9 4.8 33 108-140 167-199 (369)
375 1guz_A Malate dehydrogenase; o 91.0 0.22 7.6E-06 47.1 5.2 32 109-140 2-35 (310)
376 2uyy_A N-PAC protein; long-cha 91.0 0.27 9.2E-06 46.5 5.8 34 107-140 30-63 (316)
377 3gvi_A Malate dehydrogenase; N 91.0 0.24 8.3E-06 47.1 5.4 34 107-140 7-41 (324)
378 1txg_A Glycerol-3-phosphate de 91.0 0.19 6.4E-06 48.0 4.6 30 109-138 2-31 (335)
379 3ldh_A Lactate dehydrogenase; 91.0 0.35 1.2E-05 46.0 6.4 34 107-140 21-56 (330)
380 3dfu_A Uncharacterized protein 90.9 0.083 2.8E-06 47.6 1.9 32 107-138 6-37 (232)
381 3ego_A Probable 2-dehydropanto 90.9 0.22 7.7E-06 47.0 5.0 32 108-140 3-34 (307)
382 1nyt_A Shikimate 5-dehydrogena 90.9 0.23 8E-06 45.9 5.0 33 108-140 120-152 (271)
383 3phh_A Shikimate dehydrogenase 90.8 0.27 9.1E-06 45.4 5.3 34 107-140 118-151 (269)
384 2vns_A Metalloreductase steap3 90.7 0.25 8.7E-06 43.9 4.9 33 108-140 29-61 (215)
385 3qsg_A NAD-binding phosphogluc 90.6 0.22 7.5E-06 47.2 4.7 33 107-139 24-57 (312)
386 2vhw_A Alanine dehydrogenase; 90.6 0.22 7.6E-06 48.5 4.8 34 107-140 168-201 (377)
387 3ggo_A Prephenate dehydrogenas 90.6 0.31 1.1E-05 46.2 5.7 33 108-140 34-68 (314)
388 3h8v_A Ubiquitin-like modifier 90.5 0.26 8.9E-06 46.1 4.9 34 107-140 36-70 (292)
389 3qha_A Putative oxidoreductase 90.5 0.2 6.7E-06 47.1 4.1 34 108-141 16-49 (296)
390 4dll_A 2-hydroxy-3-oxopropiona 90.4 0.25 8.5E-06 47.0 4.9 34 107-140 31-64 (320)
391 4ffl_A PYLC; amino acid, biosy 90.4 0.24 8.4E-06 47.8 4.9 32 109-140 3-34 (363)
392 3pdu_A 3-hydroxyisobutyrate de 90.3 0.21 7.3E-06 46.6 4.2 33 109-141 3-35 (287)
393 1a5z_A L-lactate dehydrogenase 90.3 0.25 8.7E-06 46.9 4.8 32 109-140 2-35 (319)
394 3ond_A Adenosylhomocysteinase; 90.3 0.27 9.2E-06 49.2 5.1 33 108-140 266-298 (488)
395 1vl6_A Malate oxidoreductase; 90.2 0.25 8.6E-06 47.8 4.7 34 106-139 191-225 (388)
396 4e21_A 6-phosphogluconate dehy 90.2 0.3 1E-05 47.3 5.2 34 107-140 22-55 (358)
397 1oju_A MDH, malate dehydrogena 90.2 0.27 9.3E-06 46.1 4.8 32 109-140 2-35 (294)
398 2h78_A Hibadh, 3-hydroxyisobut 90.0 0.26 8.8E-06 46.3 4.6 33 108-140 4-36 (302)
399 1ur5_A Malate dehydrogenase; o 90.0 0.31 1.1E-05 46.0 5.2 33 108-140 3-36 (309)
400 3p7m_A Malate dehydrogenase; p 90.0 0.35 1.2E-05 45.9 5.5 33 108-140 6-39 (321)
401 1zud_1 Adenylyltransferase THI 90.0 0.28 9.5E-06 44.9 4.6 33 108-140 29-62 (251)
402 2f1k_A Prephenate dehydrogenas 89.9 0.32 1.1E-05 45.0 5.1 32 109-140 2-33 (279)
403 1dlj_A UDP-glucose dehydrogena 89.9 0.23 7.7E-06 49.0 4.2 31 109-140 2-32 (402)
404 4huj_A Uncharacterized protein 89.8 0.21 7.2E-06 44.6 3.6 33 108-140 24-57 (220)
405 1pjq_A CYSG, siroheme synthase 89.8 0.27 9.1E-06 49.3 4.7 34 107-140 12-45 (457)
406 2egg_A AROE, shikimate 5-dehyd 89.7 0.32 1.1E-05 45.7 4.9 33 108-140 142-175 (297)
407 1jay_A Coenzyme F420H2:NADP+ o 89.5 0.3 1E-05 43.0 4.4 32 109-140 2-34 (212)
408 3rui_A Ubiquitin-like modifier 89.5 0.37 1.3E-05 45.9 5.2 34 107-140 34-68 (340)
409 3nep_X Malate dehydrogenase; h 89.4 0.35 1.2E-05 45.7 4.9 32 109-140 2-35 (314)
410 4gwg_A 6-phosphogluconate dehy 89.3 0.4 1.4E-05 48.3 5.6 33 108-140 5-37 (484)
411 2pv7_A T-protein [includes: ch 89.3 0.36 1.2E-05 45.3 5.0 33 108-140 22-55 (298)
412 1yqg_A Pyrroline-5-carboxylate 89.3 0.35 1.2E-05 44.3 4.8 32 109-140 2-34 (263)
413 2i6t_A Ubiquitin-conjugating e 89.2 0.36 1.2E-05 45.4 4.9 34 108-141 15-50 (303)
414 3c24_A Putative oxidoreductase 89.2 0.44 1.5E-05 44.3 5.5 33 108-140 12-45 (286)
415 3vku_A L-LDH, L-lactate dehydr 89.0 0.42 1.4E-05 45.5 5.2 34 107-140 9-44 (326)
416 1b37_A Protein (polyamine oxid 89.0 0.31 1.1E-05 48.9 4.6 36 106-141 3-39 (472)
417 2aef_A Calcium-gated potassium 89.0 0.15 5E-06 46.1 1.9 32 108-140 10-41 (234)
418 1evy_A Glycerol-3-phosphate de 89.0 0.21 7.2E-06 48.4 3.2 32 109-140 17-48 (366)
419 3ktd_A Prephenate dehydrogenas 88.9 0.48 1.7E-05 45.4 5.6 33 108-140 9-41 (341)
420 2gf2_A Hibadh, 3-hydroxyisobut 88.9 0.38 1.3E-05 44.9 4.8 32 109-140 2-33 (296)
421 1vpd_A Tartronate semialdehyde 88.9 0.35 1.2E-05 45.2 4.6 33 108-140 6-38 (299)
422 1hyh_A L-hicdh, L-2-hydroxyiso 88.8 0.38 1.3E-05 45.4 4.8 32 109-140 3-36 (309)
423 2rcy_A Pyrroline carboxylate r 88.8 0.49 1.7E-05 43.2 5.4 34 108-141 5-42 (262)
424 2hk9_A Shikimate dehydrogenase 88.7 0.41 1.4E-05 44.3 4.9 33 108-140 130-162 (275)
425 1p77_A Shikimate 5-dehydrogena 88.7 0.31 1E-05 45.2 3.9 33 108-140 120-152 (272)
426 3don_A Shikimate dehydrogenase 88.7 0.37 1.3E-05 44.7 4.5 34 107-140 117-151 (277)
427 2g5c_A Prephenate dehydrogenas 88.6 0.44 1.5E-05 44.1 5.0 32 109-140 3-36 (281)
428 4ezb_A Uncharacterized conserv 88.6 0.33 1.1E-05 46.0 4.2 33 108-140 25-58 (317)
429 3e8x_A Putative NAD-dependent 88.6 0.41 1.4E-05 42.9 4.6 34 107-140 21-55 (236)
430 2we8_A Xanthine dehydrogenase; 88.5 0.51 1.8E-05 46.0 5.5 38 107-144 204-241 (386)
431 2zyd_A 6-phosphogluconate dehy 88.5 0.41 1.4E-05 48.3 5.0 34 107-140 15-48 (480)
432 3gvp_A Adenosylhomocysteinase 88.5 0.37 1.3E-05 47.3 4.5 34 107-140 220-253 (435)
433 3jyo_A Quinate/shikimate dehyd 88.5 0.5 1.7E-05 44.0 5.3 34 107-140 127-161 (283)
434 3d0o_A L-LDH 1, L-lactate dehy 88.5 0.47 1.6E-05 45.0 5.2 34 107-140 6-41 (317)
435 3ojo_A CAP5O; rossmann fold, c 88.4 0.37 1.3E-05 47.7 4.5 33 108-140 12-44 (431)
436 3u62_A Shikimate dehydrogenase 88.3 0.48 1.6E-05 43.3 4.9 32 109-140 110-142 (253)
437 2pgd_A 6-phosphogluconate dehy 88.3 0.49 1.7E-05 47.7 5.4 33 108-140 3-35 (482)
438 3ce6_A Adenosylhomocysteinase; 88.3 0.45 1.5E-05 47.9 5.1 33 108-140 275-307 (494)
439 2rir_A Dipicolinate synthase, 88.2 0.47 1.6E-05 44.5 4.9 34 107-140 157-190 (300)
440 3ew7_A LMO0794 protein; Q8Y8U8 88.1 0.51 1.7E-05 41.6 4.9 32 109-140 2-34 (221)
441 3d4o_A Dipicolinate synthase s 88.1 0.48 1.6E-05 44.3 5.0 34 107-140 155-188 (293)
442 3tnl_A Shikimate dehydrogenase 88.1 0.48 1.6E-05 44.8 4.9 34 107-140 154-188 (315)
443 2p4q_A 6-phosphogluconate dehy 88.1 0.51 1.7E-05 47.8 5.4 33 108-140 11-43 (497)
444 3d1l_A Putative NADP oxidoredu 87.9 0.53 1.8E-05 43.2 5.0 33 108-140 11-44 (266)
445 2wtb_A MFP2, fatty acid multif 87.9 0.42 1.4E-05 50.8 4.8 33 108-140 313-345 (725)
446 2o3j_A UDP-glucose 6-dehydroge 87.9 0.37 1.3E-05 48.6 4.3 33 108-140 10-44 (481)
447 2cvz_A Dehydrogenase, 3-hydrox 87.9 0.42 1.4E-05 44.4 4.4 31 109-140 3-33 (289)
448 1pgj_A 6PGDH, 6-PGDH, 6-phosph 87.8 0.52 1.8E-05 47.5 5.2 32 109-140 3-34 (478)
449 3h5n_A MCCB protein; ubiquitin 87.8 0.45 1.5E-05 45.9 4.6 33 108-140 119-152 (353)
450 3gpi_A NAD-dependent epimerase 87.8 0.59 2E-05 43.2 5.4 34 108-141 4-37 (286)
451 4aj2_A L-lactate dehydrogenase 87.8 0.61 2.1E-05 44.4 5.5 35 106-140 18-54 (331)
452 1ldn_A L-lactate dehydrogenase 87.8 0.56 1.9E-05 44.4 5.2 33 108-140 7-41 (316)
453 1yj8_A Glycerol-3-phosphate de 87.7 0.4 1.4E-05 46.6 4.2 34 108-141 22-62 (375)
454 3cky_A 2-hydroxymethyl glutara 87.6 0.47 1.6E-05 44.4 4.6 33 108-140 5-37 (301)
455 2q3e_A UDP-glucose 6-dehydroge 87.6 0.46 1.6E-05 47.7 4.7 33 108-140 6-40 (467)
456 3h2s_A Putative NADH-flavin re 87.6 0.55 1.9E-05 41.5 4.8 32 109-140 2-34 (224)
457 4gx0_A TRKA domain protein; me 87.6 0.58 2E-05 48.2 5.6 37 108-144 349-385 (565)
458 3c7a_A Octopine dehydrogenase; 87.6 0.32 1.1E-05 47.9 3.5 30 108-137 3-33 (404)
459 3pwz_A Shikimate dehydrogenase 87.6 0.63 2.2E-05 43.0 5.3 34 107-140 120-154 (272)
460 2izz_A Pyrroline-5-carboxylate 87.4 0.58 2E-05 44.4 5.1 33 108-140 23-59 (322)
461 1y8q_A Ubiquitin-like 1 activa 87.4 0.55 1.9E-05 45.1 4.9 33 108-140 37-70 (346)
462 1np3_A Ketol-acid reductoisome 87.3 0.67 2.3E-05 44.3 5.5 33 108-140 17-49 (338)
463 1vg0_A RAB proteins geranylger 87.3 1.2 4E-05 46.5 7.6 39 106-144 7-45 (650)
464 3tri_A Pyrroline-5-carboxylate 87.1 0.72 2.5E-05 42.8 5.5 33 108-140 4-39 (280)
465 2d5c_A AROE, shikimate 5-dehyd 87.1 0.66 2.2E-05 42.6 5.1 32 109-140 118-149 (263)
466 1i36_A Conserved hypothetical 87.1 0.52 1.8E-05 43.1 4.5 30 109-138 2-31 (264)
467 1x0v_A GPD-C, GPDH-C, glycerol 87.1 0.38 1.3E-05 46.2 3.7 34 108-141 9-49 (354)
468 3orq_A N5-carboxyaminoimidazol 87.1 0.87 3E-05 44.2 6.3 34 107-140 12-45 (377)
469 2ahr_A Putative pyrroline carb 87.0 0.5 1.7E-05 43.1 4.3 33 108-140 4-36 (259)
470 3fbt_A Chorismate mutase and s 87.0 0.54 1.9E-05 43.7 4.5 34 107-140 122-156 (282)
471 3gt0_A Pyrroline-5-carboxylate 86.8 0.74 2.5E-05 41.7 5.3 33 108-140 3-39 (247)
472 2zqz_A L-LDH, L-lactate dehydr 86.8 0.73 2.5E-05 43.8 5.3 35 106-140 8-44 (326)
473 3fi9_A Malate dehydrogenase; s 86.7 0.76 2.6E-05 44.0 5.4 34 107-140 8-44 (343)
474 1leh_A Leucine dehydrogenase; 86.7 0.72 2.5E-05 44.5 5.3 32 108-139 174-205 (364)
475 3t4e_A Quinate/shikimate dehyd 86.6 0.66 2.3E-05 43.8 4.9 34 107-140 148-182 (312)
476 2d4a_B Malate dehydrogenase; a 86.6 0.67 2.3E-05 43.7 5.0 32 109-140 1-33 (308)
477 1wdk_A Fatty oxidation complex 86.5 0.51 1.8E-05 50.1 4.5 33 108-140 315-347 (715)
478 1nvt_A Shikimate 5'-dehydrogen 86.5 0.48 1.6E-05 44.2 3.9 32 108-140 129-160 (287)
479 1gpj_A Glutamyl-tRNA reductase 86.5 0.59 2E-05 46.0 4.7 33 108-140 168-201 (404)
480 2qrj_A Saccharopine dehydrogen 86.5 0.73 2.5E-05 44.8 5.2 34 107-140 214-251 (394)
481 3o8q_A Shikimate 5-dehydrogena 86.5 0.64 2.2E-05 43.2 4.7 34 107-140 126-160 (281)
482 4e4t_A Phosphoribosylaminoimid 86.4 0.92 3.2E-05 44.8 6.1 34 107-140 35-68 (419)
483 3q2o_A Phosphoribosylaminoimid 86.3 0.78 2.7E-05 44.7 5.5 33 108-140 15-47 (389)
484 4gsl_A Ubiquitin-like modifier 86.3 0.7 2.4E-05 47.5 5.2 34 107-140 326-360 (615)
485 1yb4_A Tartronic semialdehyde 86.3 0.45 1.5E-05 44.3 3.6 32 108-140 4-35 (295)
486 2iz1_A 6-phosphogluconate dehy 86.2 0.79 2.7E-05 46.1 5.6 33 108-140 6-38 (474)
487 1ez4_A Lactate dehydrogenase; 86.1 0.78 2.7E-05 43.5 5.1 34 107-140 5-40 (318)
488 1npy_A Hypothetical shikimate 86.0 0.7 2.4E-05 42.7 4.7 33 108-140 120-153 (271)
489 1lu9_A Methylene tetrahydromet 86.0 0.7 2.4E-05 43.0 4.7 33 108-140 120-153 (287)
490 3vh1_A Ubiquitin-like modifier 86.0 0.66 2.3E-05 47.6 4.8 34 107-140 327-361 (598)
491 1b8p_A Protein (malate dehydro 85.7 0.58 2E-05 44.6 4.0 33 107-139 5-45 (329)
492 3on5_A BH1974 protein; structu 85.3 0.49 1.7E-05 45.5 3.3 37 107-143 199-235 (362)
493 3ius_A Uncharacterized conserv 85.3 0.64 2.2E-05 42.9 4.1 33 108-140 6-38 (286)
494 3two_A Mannitol dehydrogenase; 85.3 0.88 3E-05 43.6 5.2 33 108-140 178-210 (348)
495 4b4o_A Epimerase family protei 85.2 0.84 2.9E-05 42.4 4.9 33 109-141 2-35 (298)
496 1hdo_A Biliverdin IX beta redu 85.1 0.85 2.9E-05 39.5 4.6 33 108-140 4-37 (206)
497 3n58_A Adenosylhomocysteinase; 85.0 0.74 2.5E-05 45.4 4.4 33 108-140 248-280 (464)
498 3h9u_A Adenosylhomocysteinase; 84.9 0.92 3.1E-05 44.7 5.1 34 107-140 211-244 (436)
499 1kjq_A GART 2, phosphoribosylg 84.8 0.92 3.1E-05 44.1 5.2 35 106-140 10-44 (391)
500 3uko_A Alcohol dehydrogenase c 84.8 0.9 3.1E-05 44.1 5.1 33 108-140 195-228 (378)
No 1
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=100.00 E-value=1.3e-35 Score=298.00 Aligned_cols=343 Identities=14% Similarity=0.114 Sum_probs=231.8
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCC--Cc--ccchHHHHhcCcch---hhhhhcccceeeeCCCCC
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTN--NY--GVWEDEFRDLGLEG---CIEHVWRDTVVYIDEDEP 178 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~--~~--G~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~ 178 (476)
+.|||+|||||||||++|+.|+++|++|+||||...+.. .+ +++...++.+++.. .+...+....++.+.+..
T Consensus 3 e~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~~~g~~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (397)
T 3oz2_A 3 ETYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKR 82 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCCceecccCHHHHHHcCCCchhhhhhcccceEEEEeCCCce
Confidence 459999999999999999999999999999998765432 23 45667788877643 233333344444444432
Q ss_pred -EEec-----cCc-ceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEec-Cc--eEEECceEEEccCCCC
Q 011835 179 -ILIG-----RAY-GRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACE-HD--MIVPCRLATVASGAAS 247 (476)
Q Consensus 179 -~~~~-----~~~-~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~-~g--~~i~a~~vV~A~G~~S 247 (476)
.... ... ..++|..++..|.+.+.+.|++++ +++|+++..+++.+..+... ++ .+++||+||+|||.+|
T Consensus 83 ~~~~~~~~~~~~~~~~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~a~~vIgAdG~~S 162 (397)
T 3oz2_A 83 PIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp CEEEECSSSSCCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCCTTC
T ss_pred EeeccccccCCceeEEEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeeeccceeeeeeecccccceEEEEeEEEeCCcccc
Confidence 1111 112 258999999999999999999999 99999999888755544432 23 4689999999999999
Q ss_pred CCccccccCCCcc-cceeEEEEEEEeeCCCCCCCceeeeccCCCCCCCccccCCCCCeEEEEEEcCCceEEEEeecccCC
Q 011835 248 GKLLEYEVGGPKV-SVQTAYGVEVEVENNPYDPSLMVFMDYRDCTKQEVPSFESDNPTFLYVMPMSSTRVFFEETCLASK 326 (476)
Q Consensus 248 ~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 326 (476)
.....+....... .........+.......+++...+... .....+|.|++|.+++...++.......
T Consensus 163 ~vr~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~g~~~~~~~~~~~~~vg~~~~~~~ 231 (397)
T 3oz2_A 163 EFGRWAGLKSVILARNDIISALQYRMINVDVDPDYTDFYLG-----------SIAPAGYIWVFPKGEGMANVGIGSSINW 231 (397)
T ss_dssp HHHHHHTCGGGCCCGGGEEEEEEEEEESCCCCTTEEEEECS-----------TTSTTEEEEEEEEETTEEEEEEEEETTT
T ss_pred HHHHHcCCCcccccceeeeeeEEEEeeccccCcccceeeee-----------ccCCCceEEEeecccceeEEEEeeccch
Confidence 6433322111111 112233333444444444444433211 1223588999999999887776543222
Q ss_pred CCCChHHHHHHHHHHHHHcC-CcccceeEEEEEEeeCCCCC-CCCCCCeeEeccccCccCCcchHHHHHHHHhHHHHHHH
Q 011835 327 DGLPFDILKKKLMARLERLG-IQVLKTYEEEWSYIPVGGSL-PNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASA 404 (476)
Q Consensus 327 ~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~p~~~~~-~~~~~rv~liGDAAh~~~P~~G~G~~~Al~da~~la~~ 404 (476)
......+.+.+.+.+.... .......+.....+|+.... ++..+|++++|||||.++|++|+|+++||+||..||++
T Consensus 232 -~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAA~~~~P~~G~Gi~~A~~~g~~~A~~ 310 (397)
T 3oz2_A 232 -IHNRFELKNYLDRFIENHPGLKKGQDIQLVTGGVSVSKVKMPITMPGLMLVGDAARLIDPITGGGIANAIVSGMYAAQV 310 (397)
T ss_dssp -SCSHHHHHHHHHHHHHTCHHHHTSEEEEEEEEEEECCCCCSCCEETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHH
T ss_pred -hhhhhhHHHHHHHHHHhCccccccceeeeeeccccccCcccceeeeeEEEcccccccCCCCcchhHHHHHHHHHHHHHH
Confidence 2233444455544443321 11123333445566765543 45678999999999999999999999999999999999
Q ss_pred HHHHhccCC-CcccccccCchhhHHHHHHHhcCcHHHHHHHHHHHhhHHHHhcCChHHHHHHHHHhhc
Q 011835 405 IAYILKHDH-SRGRLTHEQSNENISMQAWNTLWPQERKRQRAFFLFGLALILQLDIEGIRTFFRTFFR 471 (476)
Q Consensus 405 l~~~l~~~~-~~~~L~~~~~~~~~~~~~w~~~~~~e~~~~~~~~~~~~~~~~~l~~~~~~~~~~~f~~ 471 (476)
|.++++.++ +.+.|+ .|++.|++.+.++..+.... +..+..++++.++.+++.+..
T Consensus 311 i~~~l~~~~~~~~~L~-------~Ye~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 367 (397)
T 3oz2_A 311 TKEAIESNDYSPQMMQ-------KYEKLIKERFERKHLRNWVA----KEKLAMLSDDTLDKLVDIVSE 367 (397)
T ss_dssp HHHHHHHTCCSHHHHH-------HHHHHHHHHHHHHHHHHHHH----HHHHHTCCHHHHHHHHHHHTT
T ss_pred HHHHHHcCCccHHHHH-------HHHHHHHHHHHHHHHHHHHH----HHHHHhCCHHHHHHHHHHHhH
Confidence 999998776 566777 89999988776665555444 667788899998888876654
No 2
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=100.00 E-value=3.5e-34 Score=288.12 Aligned_cols=343 Identities=14% Similarity=0.112 Sum_probs=235.9
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCC----CcccchHHHHhcCcchh---hhhhcccceeeeCCCCC-
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTN----NYGVWEDEFRDLGLEGC---IEHVWRDTVVYIDEDEP- 178 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~----~~G~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~- 178 (476)
.+||+||||||+|+++|+.|++.|++|+|||+...... ..+++...++.+++... +...+....+....+..
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKRP 83 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccccCHHHHHHcCCCCChHHhhhhcceEEEEcCCCCEE
Confidence 58999999999999999999999999999999774432 22345677888877432 22233334444444433
Q ss_pred EEeccC------cceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEe---cCceEEECceEEEccCCCCC
Q 011835 179 ILIGRA------YGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVAC---EHDMIVPCRLATVASGAASG 248 (476)
Q Consensus 179 ~~~~~~------~~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~---~~g~~i~a~~vV~A~G~~S~ 248 (476)
..+... ...++|..|...|.+.+.+.|++++ +++|++++.+++++..|.+ .++.+++||+||+|||.+|.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~a~~vV~A~G~~s~ 163 (397)
T 3cgv_A 84 IILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADGFESE 163 (397)
T ss_dssp EEEC-----CCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCCTTCH
T ss_pred EEEeccccCCceeEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEeCCEEEEEEEEECCeEEEEEcCEEEECCCcchH
Confidence 333221 3368999999999999998999999 9999999988774444666 34578999999999999994
Q ss_pred CccccccCC-CcccceeEEEEEEEeeCCCCCCCceeeeccCCCCCCCccccCCCCCeEEEEEEcCCceEEEEeecccCCC
Q 011835 249 KLLEYEVGG-PKVSVQTAYGVEVEVENNPYDPSLMVFMDYRDCTKQEVPSFESDNPTFLYVMPMSSTRVFFEETCLASKD 327 (476)
Q Consensus 249 ~~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 327 (476)
....+.... ........+++.+.+.....+++...+. +. .....+|+|++|.+++++.++.+.....
T Consensus 164 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----------~~~~~g~~~~~P~~~~~~~vg~~~~~~~- 231 (397)
T 3cgv_A 164 FGRWAGLKSVILARNDIISALQYRMINVDVDPDYTDFY-LG----------SIAPAGYIWVFPKGEGMANVGIGSSINW- 231 (397)
T ss_dssp HHHHHTCCTTCCCGGGEEEEEEEEEESCCCCTTEEEEE-CS----------TTSTTEEEEEEEEETTEEEEEEEEETTT-
T ss_pred hHHhcCCCccCCChhheeEEEEEEeccCCCCCCcEEEE-eC----------CcCCCceEEEEECCCCeEEEEEEecccc-
Confidence 333222222 1112223444555555444444433322 11 0123489999999999888877643322
Q ss_pred CCChHHHHHHHHHHHHHc-CCcccceeEEEEEEeeCCCCC-CCCCCCeeEeccccCccCCcchHHHHHHHHhHHHHHHHH
Q 011835 328 GLPFDILKKKLMARLERL-GIQVLKTYEEEWSYIPVGGSL-PNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAI 405 (476)
Q Consensus 328 ~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~p~~~~~-~~~~~rv~liGDAAh~~~P~~G~G~~~Al~da~~la~~l 405 (476)
........+.+.+.+... .+...++.......+|+.+.. .+..+|++++|||||.++|++|+|++.|+.||..||+.|
T Consensus 232 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~liGDAa~~~~P~~G~G~~~a~~~a~~la~~l 311 (397)
T 3cgv_A 232 IHNRFELKNYLDRFIENHPGLKKGQDIQLVTGGVSVSKVKMPITMPGLMLVGDAARLIDPITGGGIANAIVSGMYAAQVT 311 (397)
T ss_dssp CSCHHHHHHHHHHHHHTCHHHHTSEEEEEEEEEEECCCCCSCCEETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHhCcCCCCCeEEeeeeeeeecCCCccceeeCCEEEEEccccCCCCCCCCCHHHHHHHHHHHHHHH
Confidence 122344445555554433 122335555566778885443 456799999999999999999999999999999999999
Q ss_pred HHHhccCC-CcccccccCchhhHHHHHHHhcCcHHHHHHHHHHHhhHHHHhcCChHHHHHHHHHhhcC
Q 011835 406 AYILKHDH-SRGRLTHEQSNENISMQAWNTLWPQERKRQRAFFLFGLALILQLDIEGIRTFFRTFFRL 472 (476)
Q Consensus 406 ~~~l~~~~-~~~~L~~~~~~~~~~~~~w~~~~~~e~~~~~~~~~~~~~~~~~l~~~~~~~~~~~f~~l 472 (476)
.+.+..+. +...|. .|++.|+..+.++....+.+ ...+..++++.++.|++.+...
T Consensus 312 ~~~~~~~~~~~~~l~-------~Y~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 368 (397)
T 3cgv_A 312 KEAIESNDYSPQMMQ-------KYEKLIKERFERKHLRNWVA----KEKLAMLSDDTLDKLVDIVSEQ 368 (397)
T ss_dssp HHHHHHTCCSHHHHH-------HHHHHHHHHHHHHHHHHHHH----HHHHTTCCHHHHHHHHHHHTTS
T ss_pred HHHHHcCCccHHHHH-------HHHHHHHHHHHHHHHHHHHH----HHHHHhCCHHHHHHHHHhcCcc
Confidence 99886554 455566 89888887666666665555 5677889999999999876554
No 3
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=100.00 E-value=1.8e-32 Score=280.70 Aligned_cols=336 Identities=13% Similarity=0.102 Sum_probs=215.1
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCC---CCc--ccchHHHHhcCcchhhh----hhcccceeeeCCCC
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFT---NNY--GVWEDEFRDLGLEGCIE----HVWRDTVVYIDEDE 177 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~---~~~--G~~~~~l~~~~~~~~~~----~~~~~~~~~~~~~~ 177 (476)
.+||+||||||||+++|+.|++.|++|+|||+..... ..+ ++....++.+++..... ..+....++.+.+.
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~ 85 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKINGIKLYSPDMQ 85 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEEEEEEEEECTTSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhhhcceEEECCCCc
Confidence 5899999999999999999999999999999876421 122 23556777777643221 12222233333222
Q ss_pred C-EEeccCcceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEec---Cce--EEECceEEEccCCCCCCc
Q 011835 178 P-ILIGRAYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACE---HDM--IVPCRLATVASGAASGKL 250 (476)
Q Consensus 178 ~-~~~~~~~~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~---~g~--~i~a~~vV~A~G~~S~~~ 250 (476)
. ..+......++|..|.+.|.+.+.+.|++++ +++|+++..+++++.+|.+. +|+ +++||+||+|||.+|...
T Consensus 86 ~~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s~vr 165 (453)
T 3atr_A 86 TVWTVNGEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSKVVVEATGYSRSFR 165 (453)
T ss_dssp CEEEEEEEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTTEEEEEECSEEEECCGGGCTTG
T ss_pred eEEeECCCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEECCEEEEEEEEEcCCCceEEEEcCEEEECcCCchhhH
Confidence 1 1121122368999999999999999999999 99999999877744445554 665 799999999999999654
Q ss_pred cccccCC----C--cccceeEEEEEEEeeCCCCCCCceeeeccCCCCCCCccccCCCCCeEEEEEEcCCceEEEEeeccc
Q 011835 251 LEYEVGG----P--KVSVQTAYGVEVEVENNPYDPSLMVFMDYRDCTKQEVPSFESDNPTFLYVMPMSSTRVFFEETCLA 324 (476)
Q Consensus 251 ~~~~~~~----~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 324 (476)
..+.... . ...+..++...+.++....++....++- .. .....+|+|++|.+++++.++.....
T Consensus 166 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---------~~~~~g~~~~~P~~~~~~~vg~~~~~ 235 (453)
T 3atr_A 166 SKLPPELPITEDLDDKDADVAYREVLLTKEDIEDHDYLRIFI-DQ---------ETSPGGYWWYFPKGKNKVNVGLGIQG 235 (453)
T ss_dssp GGSCTTSGGGCCCCGGGEEEEEEEEEEESSCCTTTTEEEEEC-CT---------TTSTTSCEEEEEEETTEEEEEEEEES
T ss_pred HhcCCCCCcccCCCcccceeeeEEEEecCCCccCCCeEEEEE-CC---------CCCCCcEEEEEECCCCeEEEEEEecC
Confidence 4332211 1 1123344444444443222223221110 00 11224689999999998888766433
Q ss_pred CCCCCChHHHHHHHHHHHHHcCCcc--cceeEEEEEEeeCCCCC-CCCCCCeeEeccccCccCCcchHHHHHHHHhHHHH
Q 011835 325 SKDGLPFDILKKKLMARLERLGIQV--LKTYEEEWSYIPVGGSL-PNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNY 401 (476)
Q Consensus 325 ~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~p~~~~~-~~~~~rv~liGDAAh~~~P~~G~G~~~Al~da~~l 401 (476)
...... ..+.+.+.+..+.+.+ .+++......+|..... .+..+|++++|||||.++|++|||+++|++||..|
T Consensus 236 ~~~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~lvGDAAh~~~P~~G~G~~~Ai~da~~l 312 (453)
T 3atr_A 236 GMGYPS---IHEYYKKYLDKYAPDVDKSKLLVKGGALVPTRRPLYTMAWNGIIVIGDSGFTVNPVHGGGKGSAMISGYCA 312 (453)
T ss_dssp SSCCCC---HHHHHHHHHHHHCTTEEEEEEEEEEEEEEECSSCCSCSEETTEEECGGGGTCSCTTTCCCHHHHHHHHHHH
T ss_pred CCCCCC---HHHHHHHHHHhhhhhcCCCeEEeccceeccCCCCCCceecCCEEEEeCcccCCCCCccccHHHHHHHHHHH
Confidence 222221 1223333333322222 13344344556764433 45579999999999999999999999999999999
Q ss_pred HHHHHHHhccCC-CcccccccCchhhHHHHHHHhcCcHHHHHHHHHHHhhHHHHhcCChHHHHHHH
Q 011835 402 ASAIAYILKHDH-SRGRLTHEQSNENISMQAWNTLWPQERKRQRAFFLFGLALILQLDIEGIRTFF 466 (476)
Q Consensus 402 a~~l~~~l~~~~-~~~~L~~~~~~~~~~~~~w~~~~~~e~~~~~~~~~~~~~~~~~l~~~~~~~~~ 466 (476)
|++|.+.+..++ +.+.|. .|++.|+..+.........+ ...+..++++.+++++
T Consensus 313 a~~l~~~l~~~~~~~~~L~-------~Y~~~r~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 367 (453)
T 3atr_A 313 AKAILSAFETGDFSASGLW-------DMNICYVNEYGAKQASLDIF----RRFLQKLSNDDINYGM 367 (453)
T ss_dssp HHHHHHHHHHTCCSTTTTT-------HHHHHHHHHTHHHHHHHHHH----HHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHcCCccHHHHH-------HHHHHHHHHHHHHHHHHHHH----HHHHHHcCcHhHHHHH
Confidence 999999887554 456777 99999988776655554444 3344445555555554
No 4
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=100.00 E-value=4.3e-31 Score=266.80 Aligned_cols=307 Identities=16% Similarity=0.076 Sum_probs=196.8
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCC---Cccc---chHHHHhcCcchhhhhhc---ccceeeeCC
Q 011835 105 NGILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTN---NYGV---WEDEFRDLGLEGCIEHVW---RDTVVYIDE 175 (476)
Q Consensus 105 ~~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~---~~G~---~~~~l~~~~~~~~~~~~~---~~~~~~~~~ 175 (476)
...+||+||||||+||++|+.|++.|++|+|||+...... ..++ ....++.+|+.+.+.... ....++...
T Consensus 21 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~ 100 (407)
T 3rp8_A 21 QGHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMETFGGPLRRMAYRDFR 100 (407)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHHHSCCCCEEEEEETT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHhhcCCCcceEEEECC
Confidence 3568999999999999999999999999999999764422 1222 245667777755443221 222333333
Q ss_pred -CCCE-Eec---------cCcceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEcc
Q 011835 176 -DEPI-LIG---------RAYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVAS 243 (476)
Q Consensus 176 -~~~~-~~~---------~~~~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~ 243 (476)
+... .+. .....++|..|.+.|.+.+.+ ++++ +++|++++.+++ .+.|++.+|++++||+||+||
T Consensus 101 ~g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~-~v~v~~~~g~~~~a~~vV~Ad 177 (407)
T 3rp8_A 101 SGENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR--DSVQFGKRVTRCEEDAD-GVTVWFTDGSSASGDLLIAAD 177 (407)
T ss_dssp TCCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG--GGEEESCCEEEEEEETT-EEEEEETTSCEEEESEEEECC
T ss_pred CCCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc--CEEEECCEEEEEEecCC-cEEEEEcCCCEEeeCEEEECC
Confidence 2221 111 223468999999999999976 8888 999999999887 688899999999999999999
Q ss_pred CCCCCCccccccCC--CcccceeEEEEEEEeeCCCCCCCceeeeccCCCCCCCccccCCCCCeEEEEEEcCCceEEEEee
Q 011835 244 GAASGKLLEYEVGG--PKVSVQTAYGVEVEVENNPYDPSLMVFMDYRDCTKQEVPSFESDNPTFLYVMPMSSTRVFFEET 321 (476)
Q Consensus 244 G~~S~~~~~~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 321 (476)
|.+|..+..+.... ........+...+..+........... + ....+++|++|.+++++.+...
T Consensus 178 G~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~------------~~~~~~~~~~p~~~~~~~~~~~ 243 (407)
T 3rp8_A 178 GSHSALRPWVLGFTPQRRYAGYVNWNGLVEIDEALAPGDQWTT--F------------VGEGKQVSLMPVSAGRFYFFFD 243 (407)
T ss_dssp CTTCSSHHHHHSSCCCCEEEEEEEEEEEEECCTTTCCTTEEEE--E------------EETTEEEEEEEETTTEEEEEEE
T ss_pred CcChHHHHHhcCCCCCCcccCcEEEEEEEecccccCCCCceEE--E------------ECCCcEEEEEEcCCCeEEEEEE
Confidence 99997655542221 111111222222222211111111111 1 0124789999999998766554
Q ss_pred cccCC-CCCChHHHHHHHHHHHHHcCCccccee-------EEEEEEeeCCCCCCCCCCCeeEeccccCccCCcchHHHHH
Q 011835 322 CLASK-DGLPFDILKKKLMARLERLGIQVLKTY-------EEEWSYIPVGGSLPNTEQRNLAFGAAASMVHPATGYSVVR 393 (476)
Q Consensus 322 ~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~-------~~~~~~~p~~~~~~~~~~rv~liGDAAh~~~P~~G~G~~~ 393 (476)
..... .....+...+.+.+.+..+.+.+..++ ...+..+++.....+..+|++|+|||||.++|++|||+|+
T Consensus 244 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~LvGDAAh~~~P~~GqG~~~ 323 (407)
T 3rp8_A 244 VPLPAGLAEDRDTLRADLSRYFAGWAPPVQKLIAALDPQTTNRIEIHDIEPFSRLVRGRVALLGDAGHSTTPDIGQGGCA 323 (407)
T ss_dssp EECCTTCSCCTTTHHHHHHHHTTTCCHHHHHHHHHSCGGGCEEEEEEECCCCSCCEETTEEECGGGTCCCCGGGSCHHHH
T ss_pred eCCCcCCCCCchhHHHHHHHHhcCCChHHHHHHHcCCccceeEEeeEecCCCCceecCCEEEEEcccccCCcchhhhHHH
Confidence 32221 222334555666665554433222211 1125556665556677899999999999999999999999
Q ss_pred HHHhHHHHHHHHHHHhccCCCcccccccCchhhHHHHHHHhcCcH
Q 011835 394 SLSEAPNYASAIAYILKHDHSRGRLTHEQSNENISMQAWNTLWPQ 438 (476)
Q Consensus 394 Al~da~~la~~l~~~l~~~~~~~~L~~~~~~~~~~~~~w~~~~~~ 438 (476)
||+||..|+++|.... .....|. .|++.++.....
T Consensus 324 al~da~~La~~L~~~~---~~~~~l~-------~Y~~~r~~~~~~ 358 (407)
T 3rp8_A 324 AMEDAVVLGAVFRQTR---DIAAALR-------EYEAQRCDRVRD 358 (407)
T ss_dssp HHHHHHHHHHHHHSCC---CHHHHHH-------HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCC---CHHHHHH-------HHHHHHHHHHHH
Confidence 9999999999998532 2234444 777777644443
No 5
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.97 E-value=4e-29 Score=258.17 Aligned_cols=302 Identities=16% Similarity=0.107 Sum_probs=190.0
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCC---CCcccc---hHHHHhcCcchhhhhhcccceeeeCCCCC
Q 011835 105 NGILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFT---NNYGVW---EDEFRDLGLEGCIEHVWRDTVVYIDEDEP 178 (476)
Q Consensus 105 ~~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~---~~~G~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (476)
..++||+||||||+||++|+.|++.|++|+|||+..... ...+++ .+.++.+|+.+.+..........+. +..
T Consensus 10 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~-~~~ 88 (499)
T 2qa2_A 10 RSDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVETSTQGHFG-GRP 88 (499)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCEESEEEET-TEE
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccccccceec-cee
Confidence 356899999999999999999999999999999875443 222333 3556677775444321000001111 001
Q ss_pred EEe-----ccCc-ceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCce---EEECceEEEccCCCCC
Q 011835 179 ILI-----GRAY-GRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDM---IVPCRLATVASGAASG 248 (476)
Q Consensus 179 ~~~-----~~~~-~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~---~i~a~~vV~A~G~~S~ 248 (476)
... ..++ ..+++..+.+.|.+.+.+.|++++ +++|++++.+++ .+.|++.++. +++||+||+|||.+|.
T Consensus 89 ~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~-~v~v~~~~~~g~~~~~a~~vVgADG~~S~ 167 (499)
T 2qa2_A 89 VDFGVLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGD-HVVVEVEGPDGPRSLTTRYVVGCDGGRST 167 (499)
T ss_dssp EEGGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSS-CEEEEEECSSCEEEEEEEEEEECCCTTCH
T ss_pred cccccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCC-EEEEEEEcCCCcEEEEeCEEEEccCcccH
Confidence 111 1122 358999999999999999999999 999999998877 4667777763 7999999999999996
Q ss_pred CccccccCCCcccceeEEEEEEEeeCCCCCCCceeeeccCCCCCCCccccCCCCCeEEEEEEcCCceEEEEeecccC---
Q 011835 249 KLLEYEVGGPKVSVQTAYGVEVEVENNPYDPSLMVFMDYRDCTKQEVPSFESDNPTFLYVMPMSSTRVFFEETCLAS--- 325 (476)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~--- 325 (476)
.+..+....+...+.. ..+...+.... .+....+. ....++++++|..++.+.+.......
T Consensus 168 VR~~lg~~~~~~~~~~-~~~~~~v~~~~-~~~~~~~~--------------~~~~g~~~~~P~~~g~~~~~~~~~~~~~~ 231 (499)
T 2qa2_A 168 VRKAAGFDFPGTSASR-EMFLADIRGCE-ITPRPIGE--------------TVPLGMVMSAPLGDGVDRIIVCERGAPAR 231 (499)
T ss_dssp HHHHTTCCCCEECCCC-CEEEEEEESCC-CCCEEEEE--------------EETTEEEEEEECSSSCEEEEEEETTCCCC
T ss_pred HHHHcCCCCCCCCCcc-EEEEEEEEECC-CCcceEEE--------------ECCCeEEEEEEcCCCEEEEEEEecCCCCc
Confidence 4433322111111111 11222333221 12211110 11236789999988865554432111
Q ss_pred --CCCCChHHHHHHHHHHHHHcCCcccceeEEEEEEeeCCC--CCCCCCCCeeEeccccCccCCcchHHHHHHHHhHHHH
Q 011835 326 --KDGLPFDILKKKLMARLERLGIQVLKTYEEEWSYIPVGG--SLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNY 401 (476)
Q Consensus 326 --~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~p~~~--~~~~~~~rv~liGDAAh~~~P~~G~G~~~Al~da~~l 401 (476)
....+.+++.+.+.+.+.. ....... .....++... ...+..+||+|+|||||.++|+.|||+|+||+||..|
T Consensus 232 ~~~~~~~~~~~~~~l~~~~~~-~~~~~~~--~~~~~~~~~~~~a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi~DA~~L 308 (499)
T 2qa2_A 232 RRTGPPPYQEVAAAWQRLTGQ-DISHGEP--VWVSAFGDPARQVSAYRRGRVLLAGDSAHVHLPAGGQGMNVSVQDSVNL 308 (499)
T ss_dssp CCSSSCCHHHHHHHHHHHHSC-CCTTCEE--EEEEEECCCEEECSCSEETTEEECGGGTEEECCCSSCHHHHHHHHHHHH
T ss_pred cccCCCCHHHHHHHHHHHhCC-CCCccce--eEEEEEeCCcEEcccccCCCEEEEecccccCCCccccchhhhHHHHHHH
Confidence 1224456666666655431 1111111 1122334321 2345579999999999999999999999999999999
Q ss_pred HHHHHHHhccCCCcccccccCchhhHHHHHHHh
Q 011835 402 ASAIAYILKHDHSRGRLTHEQSNENISMQAWNT 434 (476)
Q Consensus 402 a~~l~~~l~~~~~~~~L~~~~~~~~~~~~~w~~ 434 (476)
++.|+..+++......|. .|++.++.
T Consensus 309 a~~La~~l~g~~~~~~L~-------~Ye~eR~~ 334 (499)
T 2qa2_A 309 GWKLAAVVSGRAPAGLLD-------TYHEERHP 334 (499)
T ss_dssp HHHHHHHHTTSSCTHHHH-------HHHHHHHH
T ss_pred HHHHHHHHcCCCChHHHH-------HHHHHHHH
Confidence 999999887554455565 78777654
No 6
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.97 E-value=4e-29 Score=258.20 Aligned_cols=302 Identities=15% Similarity=0.088 Sum_probs=190.0
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCC---CCcccc---hHHHHhcCcchhhhhhcccceeeeCCCCC
Q 011835 105 NGILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFT---NNYGVW---EDEFRDLGLEGCIEHVWRDTVVYIDEDEP 178 (476)
Q Consensus 105 ~~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~---~~~G~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (476)
...+||+||||||+||++|+.|++.|++|+||||..... ...+++ .+.++.+|+.+.+..........+. +..
T Consensus 9 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~-~~~ 87 (500)
T 2qa1_A 9 RSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVETSTQGHFG-GLP 87 (500)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSCCBCCEEEET-TEE
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhcccccccccc-cee
Confidence 456899999999999999999999999999999876432 222333 3456677775444321000001111 001
Q ss_pred EEe-----ccCc-ceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCce---EEECceEEEccCCCCC
Q 011835 179 ILI-----GRAY-GRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDM---IVPCRLATVASGAASG 248 (476)
Q Consensus 179 ~~~-----~~~~-~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~---~i~a~~vV~A~G~~S~ 248 (476)
... ..++ ..+++..+.+.|.+.+.+.|++++ +++|++++.+++ .+.|++.++. +++||+||+|||.+|.
T Consensus 88 ~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~-~v~v~~~~~~g~~~~~a~~vVgADG~~S~ 166 (500)
T 2qa1_A 88 IDFGVLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGA-GVTVEVRGPEGKHTLRAAYLVGCDGGRSS 166 (500)
T ss_dssp EEGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETT-EEEEEEEETTEEEEEEESEEEECCCTTCH
T ss_pred cccccCCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCC-eEEEEEEcCCCCEEEEeCEEEECCCcchH
Confidence 111 1122 358899999999999999999999 999999999887 5667777653 7999999999999996
Q ss_pred CccccccCCCcccceeEEEEEEEeeCCCCCCCceeeeccCCCCCCCccccCCCCCeEEEEEEcCCceEEEEeecccC---
Q 011835 249 KLLEYEVGGPKVSVQTAYGVEVEVENNPYDPSLMVFMDYRDCTKQEVPSFESDNPTFLYVMPMSSTRVFFEETCLAS--- 325 (476)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~--- 325 (476)
.+..+....+...+.. ..+...+..... +....+. ....++++++|..++.+.+.......
T Consensus 167 VR~~lg~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~--------------~~~~g~~~~~p~~~g~~~~~~~~~~~~~~ 230 (500)
T 2qa1_A 167 VRKAAGFDFPGTAATM-EMYLADIKGVEL-QPRMIGE--------------TLPGGMVMVGPLPGGITRIIVCERGTPPQ 230 (500)
T ss_dssp HHHHTTCCCCEECCCC-EEEEEEEESCCC-CCEEEEE--------------EETTEEEEEEEETTTEEEEEEEETTCCC-
T ss_pred HHHHcCCCcCCCccce-EEEEEEEEeCCC-CCceEEE--------------ECCCcEEEEEEcCCCEEEEEEEcCCCCCc
Confidence 4433322111111111 122233332211 2211110 11236789999988876555432111
Q ss_pred --CCCCChHHHHHHHHHHHHHcCCcccceeEEEEEEeeCCC--CCCCCCCCeeEeccccCccCCcchHHHHHHHHhHHHH
Q 011835 326 --KDGLPFDILKKKLMARLERLGIQVLKTYEEEWSYIPVGG--SLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNY 401 (476)
Q Consensus 326 --~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~p~~~--~~~~~~~rv~liGDAAh~~~P~~G~G~~~Al~da~~l 401 (476)
....+.+++.+.+.+.+.. ......+ .....++... ...+..+||+|+|||||.++|+.|||+|+||+||..|
T Consensus 231 ~~~~~~~~~~~~~~l~~~~~~-~~~~~~~--~~~~~~~~~~~~a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi~DA~~L 307 (500)
T 2qa1_A 231 RRETPPSWHEVADAWKRLTGD-DIAHAEP--VWVSAFGNATRQVTEYRRGRVILAGDSAHIHLPAGGQGMNTSIQDAVNL 307 (500)
T ss_dssp ----CCCHHHHHHHHHHHHSC-CCTTSEE--EEEEEEECCEEECSCSEETTEEECGGGTEECCCCSSCHHHHHHHHHHHH
T ss_pred cccCCCCHHHHHHHHHHhcCC-CCCccce--eEEEEeccCcEEccccccCCEEEEEccccCCCCccccchhhhHHHHHHH
Confidence 1223456666666555431 1111111 1122344321 2345579999999999999999999999999999999
Q ss_pred HHHHHHHhccCCCcccccccCchhhHHHHHHHh
Q 011835 402 ASAIAYILKHDHSRGRLTHEQSNENISMQAWNT 434 (476)
Q Consensus 402 a~~l~~~l~~~~~~~~L~~~~~~~~~~~~~w~~ 434 (476)
++.|+..+++......|. .|++.++.
T Consensus 308 a~~La~~~~g~~~~~~L~-------~Y~~eR~~ 333 (500)
T 2qa1_A 308 GWKLGAVVNGTATEELLD-------SYHSERHA 333 (500)
T ss_dssp HHHHHHHHTTSSCHHHHH-------HHHHHHHH
T ss_pred HHHHHHHHcCCCChHHHH-------HHHHHHHH
Confidence 999999887554445565 77777653
No 7
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.97 E-value=1.5e-28 Score=256.90 Aligned_cols=311 Identities=14% Similarity=0.060 Sum_probs=188.6
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCC---CCcccc---hHHHHhcCcchhhhhhc---ccc------
Q 011835 105 NGILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFT---NNYGVW---EDEFRDLGLEGCIEHVW---RDT------ 169 (476)
Q Consensus 105 ~~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~---~~~G~~---~~~l~~~~~~~~~~~~~---~~~------ 169 (476)
...+||+||||||+||++|+.|++.|++|+||||..... ...++. .+.++.+|+.+.+.... ...
T Consensus 3 ~~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~ 82 (535)
T 3ihg_A 3 DHEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPYPRAAGQNPRTMELLRIGGVADEVVRADDIRGTQGDFVIR 82 (535)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCCCCSCCBCHHHHHHHHHTTCHHHHHHSCCSSCTTSCCEEE
T ss_pred CccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCccceECHHHHHHHHHcCCHHHHHhhCCCcccccceeee
Confidence 345899999999999999999999999999999976442 222332 34566777754433211 111
Q ss_pred eeeeCCCCCEE----------------eccCcceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCc---eEEEEec
Q 011835 170 VVYIDEDEPIL----------------IGRAYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSG---HRLVACE 229 (476)
Q Consensus 170 ~~~~~~~~~~~----------------~~~~~~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~---~~~v~~~ 229 (476)
......+.... ...+...+++..|...|.+.+.+.|++++ +++|++++.++++ .+.+.+.
T Consensus 83 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v~v~~~ 162 (535)
T 3ihg_A 83 LAESVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGVTARLA 162 (535)
T ss_dssp EESSSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEEEEEEE
T ss_pred EEeccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccEEEEEE
Confidence 11111111111 01123468999999999999999999999 9999999987762 4566666
Q ss_pred Cc---eEEECceEEEccCCCCCCccccccCCCcc-cceeEEEEEEEeeCCCCCCCceeeeccCCCCCCCccccCCCCCeE
Q 011835 230 HD---MIVPCRLATVASGAASGKLLEYEVGGPKV-SVQTAYGVEVEVENNPYDPSLMVFMDYRDCTKQEVPSFESDNPTF 305 (476)
Q Consensus 230 ~g---~~i~a~~vV~A~G~~S~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (476)
++ .+++||+||+|||.+|..+..+....... .......+.+..+.............+ .....+.
T Consensus 163 ~~~~~~~i~a~~vV~AdG~~S~vR~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~p~~~ 231 (535)
T 3ihg_A 163 GPDGEYDLRAGYLVGADGNRSLVRESLGIGRYGHGTLTHMVGVIFDADLSGIMEPGTTGWYY-----------LHHPEFK 231 (535)
T ss_dssp ETTEEEEEEEEEEEECCCTTCHHHHHTTCCEEEEEEEEEEEEEEEECCGGGTSCTTCCEEEE-----------EECSSCE
T ss_pred cCCCeEEEEeCEEEECCCCcchHHHHcCCCcCCCCccceEEEEEEeccChhhccCCceEEEE-----------EECCCce
Confidence 65 78999999999999995433332211111 112222223222111111111000000 0011234
Q ss_pred EEEEEcCC-ceEEEEeecccCC----CCCChHHHHHHHHHHHHHcCCcccceeEEEEEEeeCC--CCCCCCCCCeeEecc
Q 011835 306 LYVMPMSS-TRVFFEETCLASK----DGLPFDILKKKLMARLERLGIQVLKTYEEEWSYIPVG--GSLPNTEQRNLAFGA 378 (476)
Q Consensus 306 ~~~~p~~~-~~~~~~~~~~~~~----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~~~rv~liGD 378 (476)
.+++|..+ +.+.+........ .....+.+.+.+.+.+....... ++. ....+++. ....+..+|++|+||
T Consensus 232 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~l~~~~~~~~~~~-~~~--~~~~~~~~~~~a~~~~~grv~LvGD 308 (535)
T 3ihg_A 232 GTFGPTDRPDRHTLFVEYDPDEGERPEDFTPQRCVELIGLALDAPEVKP-ELV--DIQGWEMAARIAERWREGRVFLAGD 308 (535)
T ss_dssp EEEEECSSTTEEEEEEEECTTTTCCGGGCCHHHHHHHHHHHHTCSSCCC-EEE--EEEEEEEEEEEESCSEETTEEECTT
T ss_pred EEEEEecCCCEEEEEEeeCccccCccccCCHHHHHHHHHHHhCCCCCce-eEE--EeeEeeeeEEEECccccCCEEEEec
Confidence 66678776 4444433211111 12344556666666554221111 222 22233332 123456799999999
Q ss_pred ccCccCCcchHHHHHHHHhHHHHHHHHHHHhccCCCcccccccCchhhHHHHHHHhcC
Q 011835 379 AASMVHPATGYSVVRSLSEAPNYASAIAYILKHDHSRGRLTHEQSNENISMQAWNTLW 436 (476)
Q Consensus 379 AAh~~~P~~G~G~~~Al~da~~la~~l~~~l~~~~~~~~L~~~~~~~~~~~~~w~~~~ 436 (476)
|||.++|+.|||+|+||+||..|++.|+..+++......|. .|++.++...
T Consensus 309 AAH~~~P~~GqG~n~ai~DA~~La~~La~~l~g~~~~~lL~-------~Ye~eR~p~a 359 (535)
T 3ihg_A 309 AAKVTPPTGGMSGNAAVADGFDLAWKLAAVLQGQAGAGLLD-------TYEDERKVAA 359 (535)
T ss_dssp TTEECCSTTSCHHHHHHHHHHHHHHHHHHHHTTSSCTTHHH-------HHHHHHHHHH
T ss_pred ccccCCCccCCccccccccHHHHHHHHHHHhcCCCcHHHHH-------hhHHHHHHHH
Confidence 99999999999999999999999999999987655566666 7887776433
No 8
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=99.96 E-value=5.6e-28 Score=257.40 Aligned_cols=310 Identities=15% Similarity=0.153 Sum_probs=193.0
Q ss_pred CcccEEEECCCHHHHHHHHHHHH-----cCCcEEEECCCCCCC---CCcccc---hHHHHhcCcchhhhhh---ccccee
Q 011835 106 GILDLVVIGCGPAGLALAAESAK-----LGLNVGLIGPDLPFT---NNYGVW---EDEFRDLGLEGCIEHV---WRDTVV 171 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~-----~G~~V~liE~~~~~~---~~~G~~---~~~l~~~~~~~~~~~~---~~~~~~ 171 (476)
..+||+||||||+||++|+.|++ .|++|+|||+..... ...+++ .+.++.+|+.+.+... +....+
T Consensus 7 ~~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~~~~gra~~l~~~tle~l~~lGl~~~l~~~~~~~~~~~~ 86 (665)
T 1pn0_A 7 SYCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYNGQADGLQCRTLESLKNLGLADKILSEANDMSTIAL 86 (665)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCCSCSCCEECHHHHHHHHTTTCHHHHHTTCBCCCEEEE
T ss_pred CCCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCCCCCCceeEEChHHHHHHHHCCCHHHHHHhccccceEEE
Confidence 35899999999999999999999 999999999875432 233443 4567778885544321 112222
Q ss_pred eeCCC-CCEE----e--------ccCcceecHHHHHHHHHHHHHHCC---CeEE-EEEEEEEEEcC-------CceEEEE
Q 011835 172 YIDED-EPIL----I--------GRAYGRVSRHLLHEELLRRCVESG---VSYL-SSKVESITEST-------SGHRLVA 227 (476)
Q Consensus 172 ~~~~~-~~~~----~--------~~~~~~i~r~~l~~~L~~~~~~~g---v~i~-~~~v~~i~~~~-------~~~~~v~ 227 (476)
+.... ..+. + ..+...++|..+++.|.+.+.+.| +++. +++|++++.++ +..+.|+
T Consensus 87 ~~~~~~g~i~~~~~~~~~~~~~~~~~~~~l~q~~le~~L~~~~~~~g~~~v~v~~g~~v~~~~~d~~~~~~~~~~~V~v~ 166 (665)
T 1pn0_A 87 YNPDENGHIRRTDRIPDTLPGISRYHQVVLHQGRIERRILDSIAEISDTRIKVERPLIPEKMEIDSSKAEDPEAYPVTMT 166 (665)
T ss_dssp EEECTTSCEEEEEEEESSCTTSCSSCCEECCHHHHHHHHHHHHHHHHTTSSCEECSEEEEEEEECGGGTTCTTCCCEEEE
T ss_pred EeCCCCcceEeecccCcccCCCCCCeeEEeeHHHHHHHHHHHHHhcCCCceEEEeCCEEEEEEecCcccccCCCCCEEEE
Confidence 22221 1111 1 112235899999999999998877 8999 99999998865 1245554
Q ss_pred ec------------------------------------------Cc--eEEECceEEEccCCCCCCccccccCCCcccce
Q 011835 228 CE------------------------------------------HD--MIVPCRLATVASGAASGKLLEYEVGGPKVSVQ 263 (476)
Q Consensus 228 ~~------------------------------------------~g--~~i~a~~vV~A~G~~S~~~~~~~~~~~~~~~~ 263 (476)
+. +| ++++||+||+|||++|..+..+........+.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~~~~~~~~~~G~~~~i~A~~VVGADG~~S~VR~~lg~~~~g~~~~ 246 (665)
T 1pn0_A 167 LRYMSEDESTPLQFGHKTENGLFRSNLQTQEEEDANYRLPEGKEAGEIETVHCKYVIGCDGGHSWVRRTLGFEMIGEQTD 246 (665)
T ss_dssp EEECCGGGSCCCTTCCCCCSSSCCCHHHHHHHHHTSCCCSTTCCTTCEEEEEEEEEEECCCTTCHHHHHHTCCCEEEEEE
T ss_pred EEecccccccccccccccccccccccccccccccccccccccCCCCceEEEEeCEEEeccCCCCHHHHhcCCCCCCCCcc
Confidence 42 35 57999999999999996554443222222333
Q ss_pred eEEEEEEEeeCCCCCCCceeeeccCCCCCCCccccCCCCCeEEEEEEcCCceEEEEeeccc--------CCCCCChHHHH
Q 011835 264 TAYGVEVEVENNPYDPSLMVFMDYRDCTKQEVPSFESDNPTFLYVMPMSSTRVFFEETCLA--------SKDGLPFDILK 335 (476)
Q Consensus 264 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~--------~~~~~~~~~~~ 335 (476)
..+++.-......++........ .....++++++|..++.+.+...... .......+++.
T Consensus 247 ~~~~v~d~~~~~~~p~~~~~~~~------------~~~~~g~~~~~P~~~~~~r~~~~~~~~~~~~~~~~~~~~t~e~~~ 314 (665)
T 1pn0_A 247 YIWGVLDAVPASNFPDIRSRCAI------------HSAESGSIMIIPRENNLVRFYVQLQARAEKGGRVDRTKFTPEVVI 314 (665)
T ss_dssp EEEEEEEEEEECCCTTTTSEEEE------------ECSSSCEEEEEECSTTCEEEEEEECC----------CCCCHHHHH
T ss_pred EEEEEEEEEECCCCCCcceEEEE------------EeCCCceEEEEEcCCCEEEEEEEeCCccccccccCcCCCCHHHHH
Confidence 33433221111122211111100 11124678899998875444332111 11234456666
Q ss_pred HHHHHHHHHcCCcccceeEEEEEEeeCCC--CCCCC-CCCeeEeccccCccCCcchHHHHHHHHhHHHHHHHHHHHhccC
Q 011835 336 KKLMARLERLGIQVLKTYEEEWSYIPVGG--SLPNT-EQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAYILKHD 412 (476)
Q Consensus 336 ~~l~~~~~~~~~~~~~~~~~~~~~~p~~~--~~~~~-~~rv~liGDAAh~~~P~~G~G~~~Al~da~~la~~l~~~l~~~ 412 (476)
+.+.+.+..+...+..+ ..+..+++.. ...+. .+||+|+|||||.++|+.|||+|+||+||..||+.|+..+++.
T Consensus 315 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~r~a~~~~~~gRV~L~GDAAH~~~P~~GqG~N~gi~DA~nLawkLa~vl~g~ 392 (665)
T 1pn0_A 315 ANAKKIFHPYTFDVQQL--DWFTAYHIGQRVTEKFSKDERVFIAGDACHTHSPKAGQGMNTSMMDTYNLGWKLGLVLTGR 392 (665)
T ss_dssp HHHHHHHTTSCCEEEEE--EEEEEEEEEEEECSCSEETTTEEECGGGTEECCSTTCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhCcccCceeeE--EEEEeeeccceehhhcccCCCEEEEECccccCCCcccCCcchhHHHHHHHHHHHHHHHcCC
Confidence 66666554322222111 1234455432 23445 6999999999999999999999999999999999999998765
Q ss_pred CCcccccccCchhhHHHHHHHhcC
Q 011835 413 HSRGRLTHEQSNENISMQAWNTLW 436 (476)
Q Consensus 413 ~~~~~L~~~~~~~~~~~~~w~~~~ 436 (476)
.....|. .|++.++...
T Consensus 393 a~~~lL~-------tYe~eR~p~a 409 (665)
T 1pn0_A 393 AKRDILK-------TYEEERQPFA 409 (665)
T ss_dssp BCGGGGH-------HHHHHHHHHH
T ss_pred CcHHHHH-------HHHHHHHHHH
Confidence 4556666 8887776433
No 9
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=99.96 E-value=2e-29 Score=254.38 Aligned_cols=312 Identities=14% Similarity=0.129 Sum_probs=177.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCC---Cccc-----chHHHHhcCcchhhhhhcc------c-ceee
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTN---NYGV-----WEDEFRDLGLEGCIEHVWR------D-TVVY 172 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~---~~G~-----~~~~l~~~~~~~~~~~~~~------~-~~~~ 172 (476)
.+|+||||||+||++|+.|+++|++|+||||++.... .+|+ ....++.+++.+.+..... . ...+
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~~~~~~G~~i~l~~~~~~~L~~lg~~~~~~~~~~~~~~~~~~~~~~ 81 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAASSILPGYGIHINSFGKQALQECLPAENWLAFEEASRYIGGQSRFY 81 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCSSCCCCEEEECHHHHHHHHHHSCHHHHHHHHHHCEEECCCCEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCCCcCCCceEEeeCHHHHHHHHHcCChHHHHHhhhhhcccCcceeEe
Confidence 4899999999999999999999999999999765432 2333 2456667776443321110 0 1111
Q ss_pred eCCCCCE------------EeccCcceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCceEEECceE
Q 011835 173 IDEDEPI------------LIGRAYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLA 239 (476)
Q Consensus 173 ~~~~~~~------------~~~~~~~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~v 239 (476)
....... ....+...++|..|.+.|.+.+ +.+++ +++|++++..+++.+.|++.||++++||+|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~---~~~v~~~~~v~~~~~~~~~~v~v~~~dG~~~~adlv 158 (412)
T 4hb9_A 82 NERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILNKGL---ANTIQWNKTFVRYEHIENGGIKIFFADGSHENVDVL 158 (412)
T ss_dssp CTTSCEEEC--------------CEEEEEHHHHHHHHHTTC---TTTEECSCCEEEEEECTTSCEEEEETTSCEEEESEE
T ss_pred cCCcceecccCCccccccccccccceEeeHHHHHHHHHhhc---cceEEEEEEEEeeeEcCCCeEEEEECCCCEEEeeEE
Confidence 1111100 1112223588999998887654 44688 999999998777678999999999999999
Q ss_pred EEccCCCCCCccccccCCCcccceeEEEEEEEeeCCCCCCCceeeeccCCCCCCCccccCCCCCeE----EEEEEcCC--
Q 011835 240 TVASGAASGKLLEYEVGGPKVSVQTAYGVEVEVENNPYDPSLMVFMDYRDCTKQEVPSFESDNPTF----LYVMPMSS-- 313 (476)
Q Consensus 240 V~A~G~~S~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~p~~~-- 313 (476)
|+|||.+|..+..+......... ....+.......+.. .......+..... .......+.+ .|..|...
T Consensus 159 VgADG~~S~vR~~l~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 233 (412)
T 4hb9_A 159 VGADGSNSKVRKQYLPFIERFDV-GVSMIIGRARLTPAL-TALLPQNFRDGTP---NSIVPKSPDWLFISMWRAPVNIHV 233 (412)
T ss_dssp EECCCTTCHHHHHHSTTCCCEEE-EEEEEEEEEECCHHH-HHHSCGGGTSSCC---EEECCSSSEEEEEEEEEEESCTTS
T ss_pred EECCCCCcchHHHhCCCcccccc-ceeEEEEEEecchhh-hcchhhhhccCCc---ceEeecCCCcceeeeeecCCceeE
Confidence 99999999765544332222111 111111111111000 0000000000000 0001111111 12222211
Q ss_pred --------ceE-EEEeecccC----CCCCChHHHHHHHHHHHHHcCCcccceeE-------EEEEEeeCCCCCCCCCCCe
Q 011835 314 --------TRV-FFEETCLAS----KDGLPFDILKKKLMARLERLGIQVLKTYE-------EEWSYIPVGGSLPNTEQRN 373 (476)
Q Consensus 314 --------~~~-~~~~~~~~~----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-------~~~~~~p~~~~~~~~~~rv 373 (476)
+.. ++....... ......+.+.+.+.+.+..+.+.+..++. ..+.........++..+||
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~li~~~~~~~~~~~~~~~~~~~~~~~~grv 313 (412)
T 4hb9_A 234 EASLAEIDNFIVWVYVAATDSLPDNITDFSAEALCDLVQSRMISWDPSLHTLVQQSDMENISPLHLRSMPHLLPWKSSTV 313 (412)
T ss_dssp CGGGCCEEEEEEEEEEEEGGGSCTTGGGCCHHHHHHHHHHHTTTSCHHHHHHHHTSCTTCCEEEEEEECCCCCCCCCCSE
T ss_pred EEeccCCCceEEEEEecccccccccccccchHHHHHHHHHHhccCChHHHHHHHhcccceeccchhccccccccccccCE
Confidence 001 111110010 11223455566666665544433322221 1223333334446778999
Q ss_pred eEeccccCccCCcchHHHHHHHHhHHHHHHHHHHHhccCCC-cccccccCchhhHHHHHHHh
Q 011835 374 LAFGAAASMVHPATGYSVVRSLSEAPNYASAIAYILKHDHS-RGRLTHEQSNENISMQAWNT 434 (476)
Q Consensus 374 ~liGDAAh~~~P~~G~G~~~Al~da~~la~~l~~~l~~~~~-~~~L~~~~~~~~~~~~~w~~ 434 (476)
+|+|||||.++|+.|||+|+||+||..||++|+....+..+ ...|. .|++.++.
T Consensus 314 ~LiGDAAH~~~P~~GqG~n~ai~DA~~La~~L~~~~~~~~~~~~aL~-------~Ye~~R~~ 368 (412)
T 4hb9_A 314 TLLGDAIHNMTPMTGSGANTALRDALLLTQKLASVASGHEELVKAIS-------DYEQQMRA 368 (412)
T ss_dssp EECTHHHHCSSCCSSSHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHH-------HHHHHHHH
T ss_pred EEEEcccccCCCchhhHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHH-------HHHHHHHH
Confidence 99999999999999999999999999999999998876543 44555 77776653
No 10
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.96 E-value=1.4e-28 Score=255.47 Aligned_cols=324 Identities=17% Similarity=0.121 Sum_probs=188.7
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcc--cch----HHHHhcCcchhhhhh-c--ccc-eeeeC
Q 011835 105 NGILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYG--VWE----DEFRDLGLEGCIEHV-W--RDT-VVYID 174 (476)
Q Consensus 105 ~~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G--~~~----~~l~~~~~~~~~~~~-~--~~~-~~~~~ 174 (476)
...+||+||||||+|+++|+.|++.|++|+|||+........| ++. ..++.+++.+.+... . ... .+...
T Consensus 5 ~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~~ 84 (512)
T 3e1t_A 5 PEVFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRHQIGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGTFRWG 84 (512)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEEEECS
T ss_pred CccCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCCCCCCcccCcchHHHHHHHhCcHHHHHHcCCccccCceEEec
Confidence 3458999999999999999999999999999999763332222 222 245566765433221 1 010 11111
Q ss_pred -CCCCEEe--------ccC-cceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEE--ecCc--eEEECceE
Q 011835 175 -EDEPILI--------GRA-YGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVA--CEHD--MIVPCRLA 239 (476)
Q Consensus 175 -~~~~~~~--------~~~-~~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~--~~~g--~~i~a~~v 239 (476)
......+ ..+ ...++|..|...|.+.+.+.||+++ +++|+++..+++++..|. ..+| .+++||+|
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~~~v~gv~~~~~dG~~~~i~ad~V 164 (512)
T 3e1t_A 85 KEPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLFEGERAVGVRYRNTEGVELMAHARFI 164 (512)
T ss_dssp SCSSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEETTEEEEEEEECSSSCEEEEEEEEE
T ss_pred CCccccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEECCEEEEEEEEeCCCCEEEEEcCEE
Confidence 1111110 011 2258999999999999999999999 999999999877543344 4456 48999999
Q ss_pred EEccCCCCCCccccccCCCcccceeEEEEEEEeeCC---CCCCCceeeeccCCCCCCCccccCCCCCeEEEEEEcCCceE
Q 011835 240 TVASGAASGKLLEYEVGGPKVSVQTAYGVEVEVENN---PYDPSLMVFMDYRDCTKQEVPSFESDNPTFLYVMPMSSTRV 316 (476)
Q Consensus 240 V~A~G~~S~~~~~~~~~~~~~~~~~~~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 316 (476)
|+|||.+|..+..+...... .+.....+...+... +.+.....+. .....+|+|++|..+++.
T Consensus 165 I~AdG~~S~vr~~lg~~~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~~~-------------~~~~~G~~~~~Pl~~~~~ 230 (512)
T 3e1t_A 165 VDASGNRTRVSQAVGERVYS-RFFQNVALYGYFENGKRLPAPRQGNILS-------------AAFQDGWFWYIPLSDTLT 230 (512)
T ss_dssp EECCCTTCSSGGGTCCEEEC-STTCEEEEEEEEESCCCCSTTCTTSEEE-------------EEETTEEEEEEECSSSEE
T ss_pred EECCCcchHHHHHcCCCccC-chhcceEEEEEecCCccCCCCCcCceEE-------------EEeCCceEEEEEeCCCeE
Confidence 99999999655544211111 111122222222211 1111111111 111347899999999887
Q ss_pred EEEeecccCC---CCCChHHHHHHHHHHHHHcCCcccceeE---EEEEEeeCC-----CCCCCCCCCeeEeccccCccCC
Q 011835 317 FFEETCLASK---DGLPFDILKKKLMARLERLGIQVLKTYE---EEWSYIPVG-----GSLPNTEQRNLAFGAAASMVHP 385 (476)
Q Consensus 317 ~~~~~~~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~---~~~~~~p~~-----~~~~~~~~rv~liGDAAh~~~P 385 (476)
.++....... .....++..+.+....+.....+..... .....+++. ....+..+|++++|||||+++|
T Consensus 231 ~vg~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~vvlvGDAAh~~~P 310 (512)
T 3e1t_A 231 SVGAVVSREAAEAIKDGHEAALLRYIDRCPIIKEYLAPATRVTTGDYGEIRIRKDYSYCNTSFWKNGMALVGDAACFVDP 310 (512)
T ss_dssp EEEEEEEHHHHTTTSSCHHHHHHHHHHTSHHHHHHHTTCEECCSSTTSSCEEEESCCEEESCSBCSSEEECGGGTEECCS
T ss_pred EEEEEecHHHhhhhcCCHHHHHHHHHHhCchHHHHHhcCccccccccccceeeccccccccccccCCEEEEechhhcCCC
Confidence 7766432111 1111222222222211111000000000 000001110 1124457899999999999999
Q ss_pred cchHHHHHHHHhHHHHHHHHHHHhccCC-CcccccccCchhhHHHHHHHhcCcHHHHHHHHHHHh
Q 011835 386 ATGYSVVRSLSEAPNYASAIAYILKHDH-SRGRLTHEQSNENISMQAWNTLWPQERKRQRAFFLF 449 (476)
Q Consensus 386 ~~G~G~~~Al~da~~la~~l~~~l~~~~-~~~~L~~~~~~~~~~~~~w~~~~~~e~~~~~~~~~~ 449 (476)
+.|||+++|++||..||++|...+.+.. ....|. .|++.|+..+...+.....++.+
T Consensus 311 ~~GqG~~~Al~dA~~La~~L~~~l~~~~~~~~aL~-------~Ye~~~~~~~~~~~~~~~~~y~~ 368 (512)
T 3e1t_A 311 VFSSGVHLATYSALLVARAINTCLAGEMSEQRCFE-------EFERRYRREYGNFYQFLVAFYDM 368 (512)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHTTTCSCHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHcCCccHHHHHH-------HHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999886543 223455 78888876665544444444433
No 11
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.96 E-value=6.3e-28 Score=242.47 Aligned_cols=300 Identities=15% Similarity=0.157 Sum_probs=178.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCC-----CCCcccc---hHHHHhcCcchhhhhh---cccceeeeCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPF-----TNNYGVW---EDEFRDLGLEGCIEHV---WRDTVVYIDED 176 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~-----~~~~G~~---~~~l~~~~~~~~~~~~---~~~~~~~~~~~ 176 (476)
+||+||||||+||++|+.|++.|++|+|||+.... ....+++ ...++.+|+.+.+... .....++.. +
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~-~ 81 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVHEGVEIAFA-G 81 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHCEEESCEEEEET-T
T ss_pred ccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcCCccceEEEEEC-C
Confidence 79999999999999999999999999999987631 1111222 3456677775444321 111222221 1
Q ss_pred CCEEe-------ccCcceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEe-cCce--EEECceEEEccCC
Q 011835 177 EPILI-------GRAYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVAC-EHDM--IVPCRLATVASGA 245 (476)
Q Consensus 177 ~~~~~-------~~~~~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~-~~g~--~i~a~~vV~A~G~ 245 (476)
....+ +.....+++..+.+.|.+.+.+.|++++ +++|++++.++++.+.|++ .+|+ ++++|+||+|||.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~~~~a~~vV~AdG~ 161 (394)
T 1k0i_A 82 QRRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFERDGERLRLDCDYIAGCDGF 161 (394)
T ss_dssp EEEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEEETTEEEEEECSEEEECCCT
T ss_pred ceEEeccccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCceEEEEecCCcEEEEEeCEEEECCCC
Confidence 11111 1112246888899999999988899999 9999999886433466776 6776 7999999999999
Q ss_pred CCCCccccccCCCcccceeE--EEEEEEeeCCCCCCCceeeeccCCCCCCCccccCCCCCeEEEEEEcCCceEEEEeecc
Q 011835 246 ASGKLLEYEVGGPKVSVQTA--YGVEVEVENNPYDPSLMVFMDYRDCTKQEVPSFESDNPTFLYVMPMSSTRVFFEETCL 323 (476)
Q Consensus 246 ~S~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 323 (476)
+|..+..+...... .+... +.+.......+.......+ .....+|.|+.|..++...+.....
T Consensus 162 ~S~vr~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~g~~~~~~~~~~~~~~~~~~~ 226 (394)
T 1k0i_A 162 HGISRQSIPAERLK-VFERVYPFGWLGLLADTPPVSHELIY--------------ANHPRGFALCSQRSATRSQYYVQVP 226 (394)
T ss_dssp TCSTGGGSCGGGCE-EEEEEEEEEEEEEEESSCCSCSSCEE--------------ECCTTCCEEEEEEETTEEEEEEEEC
T ss_pred CcHHHHhcCccccc-cccccccceeEEEecCCCCCccceEE--------------EEcCCceEEEEecCCCcEEEEEEeC
Confidence 99755444322111 11111 2222212211111111111 0112345666666665544433221
Q ss_pred cCC--CCCChHHHHHHHHHHHHHc-CCccc--ceeEEEEEEeeCCC--CCCCCCCCeeEeccccCccCCcchHHHHHHHH
Q 011835 324 ASK--DGLPFDILKKKLMARLERL-GIQVL--KTYEEEWSYIPVGG--SLPNTEQRNLAFGAAASMVHPATGYSVVRSLS 396 (476)
Q Consensus 324 ~~~--~~~~~~~~~~~l~~~~~~~-~~~~~--~~~~~~~~~~p~~~--~~~~~~~rv~liGDAAh~~~P~~G~G~~~Al~ 396 (476)
... ...+.+...+.+.+.+..+ ++.+. ... ....+|+.. ..++..+|++|+|||||.++|+.|||+|+||+
T Consensus 227 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~grv~LvGDAAh~~~P~~GqG~~~ai~ 304 (394)
T 1k0i_A 227 LSEKVEDWSDERFWTELKARLPSEVAEKLVTGPSL--EKSIAPLRSFVVEPMQHGRLFLAGDAAHIVPPTGAKGLNLAAS 304 (394)
T ss_dssp TTCCGGGCCHHHHHHHHHHTSCHHHHHHCCCCCEE--EEEEEEEEEEEEECSEETTEEECGGGTEECCGGGTCHHHHHHH
T ss_pred CCCCccccCHHHHHHHHHHhhCcccccccccCcce--eeEEEEhhhhhccccccCCEEEEechhhcCCCcccchHHHHHH
Confidence 111 1223444445554443221 11111 111 122333321 22456799999999999999999999999999
Q ss_pred hHHHHHHHHHHHhccCCCcccccccCchhhHHHHHHH
Q 011835 397 EAPNYASAIAYILKHDHSRGRLTHEQSNENISMQAWN 433 (476)
Q Consensus 397 da~~la~~l~~~l~~~~~~~~L~~~~~~~~~~~~~w~ 433 (476)
||..||++|...++.+ ....|. .|++.++
T Consensus 305 da~~La~~L~~~~~~~-~~~~L~-------~Y~~~r~ 333 (394)
T 1k0i_A 305 DVSTLYRLLLKAYREG-RGELLE-------RYSAICL 333 (394)
T ss_dssp HHHHHHHHHHHHHHHC-CGGGGG-------GHHHHHH
T ss_pred HHHHHHHHHHHHhccC-chHHHH-------HHHHHHH
Confidence 9999999999887543 245566 7776664
No 12
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.96 E-value=3.6e-28 Score=246.30 Aligned_cols=289 Identities=13% Similarity=0.077 Sum_probs=174.6
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcc--c---chHHHHhcCcchhhhhh-c--ccceeeeCCCC
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYG--V---WEDEFRDLGLEGCIEHV-W--RDTVVYIDEDE 177 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G--~---~~~~l~~~~~~~~~~~~-~--~~~~~~~~~~~ 177 (476)
..+||+||||||+|+++|+.|++.|++|+|||+........| + ....++.+++.+.+... + .....+.....
T Consensus 4 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~g~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~ 83 (421)
T 3nix_A 4 EKVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPRFVIGESLLPRCMEHLDEAGFLDAVKAQGFQQKFGAKFVRGKE 83 (421)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCGGGHHHHHHTTCHHHHHHTTCEEECEEEEEETTE
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccCcccHhHHHHHHHcCChHHHHHcCCcccCCcEEEeCCe
Confidence 458999999999999999999999999999999753332222 2 23455666664333221 1 00000111110
Q ss_pred CEE--ec------c-CcceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCc-eEEEEecCce--EEECceEEEccC
Q 011835 178 PIL--IG------R-AYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSG-HRLVACEHDM--IVPCRLATVASG 244 (476)
Q Consensus 178 ~~~--~~------~-~~~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~-~~~v~~~~g~--~i~a~~vV~A~G 244 (476)
... +. . ....++|..+...|.+.+.+.|++++ +++|++++.++++ .+.+.+.+|+ +++||+||+|||
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~A~G 163 (421)
T 3nix_A 84 IADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDASG 163 (421)
T ss_dssp EEEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEECCG
T ss_pred eEEEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEECCC
Confidence 000 00 1 12368999999999999988899999 9999999988764 2456667776 799999999999
Q ss_pred CCCCCcc--ccccCCCcccceeEEEEEEEeeCC----CCCCCceeeeccCCCCCCCccccCCCCCeEEEEEEcCCceEEE
Q 011835 245 AASGKLL--EYEVGGPKVSVQTAYGVEVEVENN----PYDPSLMVFMDYRDCTKQEVPSFESDNPTFLYVMPMSSTRVFF 318 (476)
Q Consensus 245 ~~S~~~~--~~~~~~~~~~~~~~~g~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 318 (476)
.+|.... +....... ..... +...+... .++.....+... .....+|+|++|.++++..+
T Consensus 164 ~~s~l~~~~g~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~g~~~~~P~~~~~~~v 229 (421)
T 3nix_A 164 YGRVIPRMFGLDKPSGF-ESRRT--LFTHIKDVKRPVAAEMEGNRITAV-----------VHKPKVWIWVIPFSNGNTSV 229 (421)
T ss_dssp GGCHHHHHTTCEECCSS-CCCEE--EEEEEECTTCCC----CCSEEEEE-----------EEETTEEEEEEECTTSEEEE
T ss_pred CchhhHHhcCCCCCCcC-CCcEE--EEEEECCCcCCCccCCCCeEEEEE-----------eCCCCEEEEEEEECCCCEEE
Confidence 9984322 22211111 11111 22222211 111111111100 12245899999999998888
Q ss_pred EeecccCC---CCCChHHHHHHHHHHHHHcCCcccceeE-----EEEEEeeCCC--CCCCCCCCeeEeccccCccCCcch
Q 011835 319 EETCLASK---DGLPFDILKKKLMARLERLGIQVLKTYE-----EEWSYIPVGG--SLPNTEQRNLAFGAAASMVHPATG 388 (476)
Q Consensus 319 ~~~~~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~-----~~~~~~p~~~--~~~~~~~rv~liGDAAh~~~P~~G 388 (476)
+....... .....++. +...+... +.+...+. .+...++... ..++..++++++|||||+++|++|
T Consensus 230 g~~~~~~~~~~~~~~~~~~---l~~~~~~~-p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAa~~~~P~~G 305 (421)
T 3nix_A 230 GFVGEPSYFDEYTGTPEER---MRAMIANE-GHIAERFKSEEFLFEPRTIEGYAISASKLYGDGFVLTGNATEFLDPIFS 305 (421)
T ss_dssp EEEECHHHHTTSCSCHHHH---HHHHHHTC-TTTHHHHTTCCBSSCCEEEECCCBEESCSEETTEEECGGGTCBCCSTTC
T ss_pred EEEecHHHhhhcCCCHHHH---HHHHHHhC-cHHHHHHhcCccccCceeecccceeeeeeccCCEEEecccccccCCccc
Confidence 76532211 11122232 22222221 11111110 1122223221 234556899999999999999999
Q ss_pred HHHHHHHHhHHHHHHHHHHHhccC
Q 011835 389 YSVVRSLSEAPNYASAIAYILKHD 412 (476)
Q Consensus 389 ~G~~~Al~da~~la~~l~~~l~~~ 412 (476)
+|++.|+.||..||++|.+.+.++
T Consensus 306 ~G~~~A~~~a~~la~~l~~~~~~~ 329 (421)
T 3nix_A 306 SGATFAMESGSKGGKLAVQFLKGE 329 (421)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred ccHHHHHHHHHHHHHHHHHHhcCC
Confidence 999999999999999999988765
No 13
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.96 E-value=1.4e-28 Score=257.49 Aligned_cols=303 Identities=16% Similarity=0.075 Sum_probs=179.7
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCC---CCcccc---hHHHHhcCcchhhhhhcccceee-eCCCC-
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFT---NNYGVW---EDEFRDLGLEGCIEHVWRDTVVY-IDEDE- 177 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~---~~~G~~---~~~l~~~~~~~~~~~~~~~~~~~-~~~~~- 177 (476)
..+||+||||||+||++|+.|++.|++|+|||+..... ...++. .+.++.+|+.+.+.......... +....
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~ 127 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPFAGIFT 127 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCCBTTBCT
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCceeCCccc
Confidence 45899999999999999999999999999999875433 222332 44566667654332211100000 11100
Q ss_pred -CEE-----eccCc-ceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEe--cCc-eEEECceEEEccCCC
Q 011835 178 -PIL-----IGRAY-GRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVAC--EHD-MIVPCRLATVASGAA 246 (476)
Q Consensus 178 -~~~-----~~~~~-~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~--~~g-~~i~a~~vV~A~G~~ 246 (476)
... ...++ ..+++..+.+.|.+.+.+.|++++ +++|++++.+++ .+.|++ .+| ++++||+||+|||.+
T Consensus 128 ~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~-~v~v~~~~~~G~~~~~a~~vV~ADG~~ 206 (570)
T 3fmw_A 128 QGLDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAE-AVEVTVAGPSGPYPVRARYGVGCDGGR 206 (570)
T ss_dssp TCCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSS-CEEEEEEETTEEEEEEESEEEECSCSS
T ss_pred ccccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCC-eEEEEEEeCCCcEEEEeCEEEEcCCCC
Confidence 000 11122 258999999999999988899999 999999998877 456666 677 789999999999999
Q ss_pred CCCccccccCCCcccceeEEEEEEEeeCCCCCCCceeeeccCCCCCCCccccCCCCCeEEEE-EEcCCceE-EEEeeccc
Q 011835 247 SGKLLEYEVGGPKVSVQTAYGVEVEVENNPYDPSLMVFMDYRDCTKQEVPSFESDNPTFLYV-MPMSSTRV-FFEETCLA 324 (476)
Q Consensus 247 S~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~~~~-~~~~~~~~ 324 (476)
|..+..+....+...+. ...+...+.... +. ..+ .+ .....+++|+ +|..++.. .+......
T Consensus 207 S~vR~~lGi~~~~~~~~-~~~~~~~v~~~~-~~--~~~-~~-----------~~~~~G~~~~~~P~~~g~~~~i~~~~~~ 270 (570)
T 3fmw_A 207 STVRRLAADRFPGTEAT-VRALIGYVTTPE-RE--VPR-RW-----------ERTPDGILVLAFPPEGGLGPGWSSSSTG 270 (570)
T ss_dssp CHHHHHTTCCCCCCCCC-EEEEEEECCCCS-CS--SCC-CC-----------CCCCSSCEEECCCC------CEEEEEES
T ss_pred chHHHHcCCCCccceee-eEEEEEEEEecC-CC--cce-EE-----------EecCCEEEEEEeecCCCeEEEEEEEeCC
Confidence 95433332211111221 122233332211 11 000 00 1112345666 78887754 33322211
Q ss_pred C-----CCCCChHHHHHHHHHHHHHcCCcccceeEE-EEEEeeCCCC--CCCCCCCeeEeccccCccCCcchHHHHHHHH
Q 011835 325 S-----KDGLPFDILKKKLMARLERLGIQVLKTYEE-EWSYIPVGGS--LPNTEQRNLAFGAAASMVHPATGYSVVRSLS 396 (476)
Q Consensus 325 ~-----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~p~~~~--~~~~~~rv~liGDAAh~~~P~~G~G~~~Al~ 396 (476)
. ....+.+++.+.+...+ +..+...... ....+|+... ..+..+||+|+|||||.++|+.|||+|+||+
T Consensus 271 ~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~a~~~~~grv~LvGDAAH~~~P~~GqG~n~gl~ 347 (570)
T 3fmw_A 271 HSPAADEGPVTLEDLGAAVARVR---GTPLTLTEPVSWLSRFGDASRQAKRYRSGRVLLAGDAAHVHFPIGGQGLNTGLQ 347 (570)
T ss_dssp CC-----CCCCHHHHHHHTTSSS---SCCCCCCSCCEEEEEECCCCEECSCSEETTEEECGGGTEECCCCSSCHHHHHHH
T ss_pred CCccccccCCCHHHHHHHHHHHh---hcccccceeeeeeEEeecccccccccccCCEEEEEecceecCCCcCcCHhHHHH
Confidence 1 12233444444443332 2121111111 2334555332 3455799999999999999999999999999
Q ss_pred hHHHHHHHHHHHhccCCCcccccccCchhhHHHHHHHhc
Q 011835 397 EAPNYASAIAYILKHDHSRGRLTHEQSNENISMQAWNTL 435 (476)
Q Consensus 397 da~~la~~l~~~l~~~~~~~~L~~~~~~~~~~~~~w~~~ 435 (476)
||..|++.|+..+++..+...|. .|++.++..
T Consensus 348 DA~~La~~La~~~~g~~~~~lL~-------~Ye~eR~~~ 379 (570)
T 3fmw_A 348 DAVNLGWKLAARVRGWGSEELLD-------TYHDERHPV 379 (570)
T ss_dssp HHHHHHHHHHHHHHSCCCHHHHH-------HHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCcHHHHH-------HHHHHHHHH
Confidence 99999999999887654555666 777776543
No 14
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.96 E-value=1.6e-28 Score=257.63 Aligned_cols=320 Identities=16% Similarity=0.127 Sum_probs=189.7
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcc--c---chHHHHhcCcchhhhhh-cc---c-ceeeeCC
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYG--V---WEDEFRDLGLEGCIEHV-WR---D-TVVYIDE 175 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G--~---~~~~l~~~~~~~~~~~~-~~---~-~~~~~~~ 175 (476)
..+||+||||||||+++|+.|++.|++|+|||+........| + ....++.+|+.+.+... +. . ...+...
T Consensus 22 ~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~~~G~~l~p~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 101 (591)
T 3i3l_A 22 TRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRYRVGESLLPGTMSILNRLGLQEKIDAQNYVKKPSATFLWGQD 101 (591)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCCCCCCBCCHHHHHHHHHTTCHHHHHHHCCEEECEEEEECSSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCCceeeeECHHHHHHHHHcCCcHHHHhcCCcccCCcEEEecCC
Confidence 458999999999999999999999999999999754333322 2 23455666764433321 11 0 1111111
Q ss_pred CCCEEe----------ccCc-ceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEec-Cc--eEEECceEE
Q 011835 176 DEPILI----------GRAY-GRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACE-HD--MIVPCRLAT 240 (476)
Q Consensus 176 ~~~~~~----------~~~~-~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~-~g--~~i~a~~vV 240 (476)
.....+ ..++ ..+++..|...|.+.+.+.||+++ +++|+++..+++..+.|.+. +| .+++||+||
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~~G~~~~i~AdlVV 181 (591)
T 3i3l_A 102 QAPWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLSDPDRVVLTVRRGGESVTVESDFVI 181 (591)
T ss_dssp CCCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECCSTTCEEEEEEETTEEEEEEESEEE
T ss_pred CccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEecCCceEEEEcCEEE
Confidence 111110 1122 268999999999999999999999 99999999865547778776 66 589999999
Q ss_pred EccCCCCCCccccccCCCcccceeEEEEEEEeeCC---CCCCCceeeeccCCCCCCCccccCCCCCeEEEEEEcCCceEE
Q 011835 241 VASGAASGKLLEYEVGGPKVSVQTAYGVEVEVENN---PYDPSLMVFMDYRDCTKQEVPSFESDNPTFLYVMPMSSTRVF 317 (476)
Q Consensus 241 ~A~G~~S~~~~~~~~~~~~~~~~~~~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 317 (476)
+|||.+|.....+........+ ..+.+...+... +.+.....+. .....+|+|++|..++.+.
T Consensus 182 ~AdG~~S~lr~~lg~~~~~~~~-~~~av~~~~~~~~~~~~~~~~~~~~-------------~~~~~G~~w~iPl~~~~~s 247 (591)
T 3i3l_A 182 DAGGSGGPISRKLGVRQYDEFY-RNFAVWSYFKLKDPFEGDLKGTTYS-------------ITFEDGWVWMIPIKDDLYS 247 (591)
T ss_dssp ECCGGGCHHHHHHTCEEEEEEE-EEEEEEEEEECCCSCCSTTTTCEEE-------------EEETTEEEEEEECSSSEEE
T ss_pred ECCCCcchhHHHcCCCCCCccc-cceEEEEEEecCccccCCCCCceEE-------------EEcCCcEEEEEECCCCeEE
Confidence 9999999543332211111111 112222222211 1111111111 1123488999999998877
Q ss_pred EEeecccCCC----CCChHHHHHHHHHHHHHcCCccccee--EE--EEEEeeCCCCCCCCCCCeeEeccccCccCCcchH
Q 011835 318 FEETCLASKD----GLPFDILKKKLMARLERLGIQVLKTY--EE--EWSYIPVGGSLPNTEQRNLAFGAAASMVHPATGY 389 (476)
Q Consensus 318 ~~~~~~~~~~----~~~~~~~~~~l~~~~~~~~~~~~~~~--~~--~~~~~p~~~~~~~~~~rv~liGDAAh~~~P~~G~ 389 (476)
++........ ..+.+.+.+.+...++.+...+.... .. ....++. ...++..+|++++|||||+++|+.|+
T Consensus 248 v~~~~~~~~~~~l~~~~~~~~~~~l~~~~p~l~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~rvvLIGDAAh~~~Pl~Gq 326 (591)
T 3i3l_A 248 VGLVVDRSKSAEVREQGADAFYSSTLAKCAKAMDILGGAEQVDEVRIVQDWSY-DTEVFSADRFFLCGDAACFTDPLFSQ 326 (591)
T ss_dssp EEEEEEGGGHHHHHHHCHHHHHHHHHTTCHHHHHHHTTCEECSCCEEEEEEEE-EESCSEETTEEECGGGTCBCCGGGCC
T ss_pred EEEEcCHHHHhhhccCCHHHHHHHHHHhCHHHHHHHhcCccccCceEeccccc-chhhcccCCEEEEccccccCCCcccc
Confidence 7665322111 01112222222211111100000000 00 0111111 12345678999999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHHHhccCC-CcccccccCchhhHHHHHHHhcCcHHHHHHHHHH
Q 011835 390 SVVRSLSEAPNYASAIAYILKHDH-SRGRLTHEQSNENISMQAWNTLWPQERKRQRAFF 447 (476)
Q Consensus 390 G~~~Al~da~~la~~l~~~l~~~~-~~~~L~~~~~~~~~~~~~w~~~~~~e~~~~~~~~ 447 (476)
|+++|+.||..||++|...+..+. ....+. .|++.|+..+..-......++
T Consensus 327 GinlAl~dA~~LA~~L~~~l~~~~~~~~al~-------~Y~~~~~~~~~~i~~~~~~~Y 378 (591)
T 3i3l_A 327 GVHLASQSAVSAAAAIDRITRHGDEKDAVHA-------WYNRTYREAYEQYHQFLASFY 378 (591)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCGGGHHHHHH-------HHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHhCCchHHHHHH-------HHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999886543 233444 788888766654444444444
No 15
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=99.96 E-value=8.3e-28 Score=255.64 Aligned_cols=306 Identities=17% Similarity=0.175 Sum_probs=188.1
Q ss_pred CcccEEEECCCHHHHHHHHHHHH-cCCcEEEECCCCCCC---CCcccc---hHHHHhcCcchhhhhh---cccceeeeCC
Q 011835 106 GILDLVVIGCGPAGLALAAESAK-LGLNVGLIGPDLPFT---NNYGVW---EDEFRDLGLEGCIEHV---WRDTVVYIDE 175 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~-~G~~V~liE~~~~~~---~~~G~~---~~~l~~~~~~~~~~~~---~~~~~~~~~~ 175 (476)
..+||+||||||+||++|+.|++ .|++|+||||..... ...+++ .+.++.+|+.+.+... +....++...
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~~g~a~~l~~~t~e~l~~lGl~~~~~~~~~~~~~~~~~~~~ 110 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPMELGQADGIACRTMEMFEAFEFADSILKEACWINDVTFWKPD 110 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCSSCSCCEECHHHHHHHHHTTCHHHHHHHSEEECEEEEEEEC
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCcHHHHHHhcccccceEEECCC
Confidence 46899999999999999999999 999999999875432 223343 3556677775443221 1112222211
Q ss_pred ----CCCEE---e--------ccCcceecHHHHHHHHHHHHHHCCC--eEE-EEEEEEEEEcCC---ceEEEEec-----
Q 011835 176 ----DEPIL---I--------GRAYGRVSRHLLHEELLRRCVESGV--SYL-SSKVESITESTS---GHRLVACE----- 229 (476)
Q Consensus 176 ----~~~~~---~--------~~~~~~i~r~~l~~~L~~~~~~~gv--~i~-~~~v~~i~~~~~---~~~~v~~~----- 229 (476)
+.... + ..+...+++..+.+.|.+.+.+.|+ +++ +++|++++.+++ ..+.|++.
T Consensus 111 ~~~~g~~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~ 190 (639)
T 2dkh_A 111 PGQPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAA 190 (639)
T ss_dssp TTSTTCEEEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGG
T ss_pred CCCCcceEeecccCcccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEecccc
Confidence 11110 0 1122358999999999999999987 999 999999998763 14666654
Q ss_pred -Cc--eEEECceEEEccCCCCCCccccccCCCcccceeEEEEEEEeeCCCCCCCc-eeeeccCCCCCCCccccCCCCCeE
Q 011835 230 -HD--MIVPCRLATVASGAASGKLLEYEVGGPKVSVQTAYGVEVEVENNPYDPSL-MVFMDYRDCTKQEVPSFESDNPTF 305 (476)
Q Consensus 230 -~g--~~i~a~~vV~A~G~~S~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 305 (476)
+| ++++||+||+|||.+|..+..+........+...+++.-......++... ...+ .. ..++
T Consensus 191 ~~G~~~~i~a~~vVgADG~~S~vR~~lg~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~-------------~~-~~g~ 256 (639)
T 2dkh_A 191 HAGQIETVQARYVVGCDGARSNVRRAIGRQLVGDSANQAWGVMDVLAVTDFPDVRYKVAI-------------QS-EQGN 256 (639)
T ss_dssp GTTCEEEEEEEEEEECCCTTCHHHHHTTCCCEECSCSCCEEEEEEEEEECCTTTTSEEEE-------------EE-TTEE
T ss_pred CCCCeEEEEeCEEEECCCcchHHHHHhCCCCCCCCccceEEEEEEEEccCCCccceeEEE-------------Ec-CCce
Confidence 45 57999999999999996433332211111222233322111111111110 1111 11 2477
Q ss_pred EEEEEcCCc-eEEEEeeccc-------CCCCCChHHHHHHHHHHHHHcCCcccceeEE-EEEEeeCCCC--CCCC-----
Q 011835 306 LYVMPMSST-RVFFEETCLA-------SKDGLPFDILKKKLMARLERLGIQVLKTYEE-EWSYIPVGGS--LPNT----- 369 (476)
Q Consensus 306 ~~~~p~~~~-~~~~~~~~~~-------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~p~~~~--~~~~----- 369 (476)
+|++|..++ .+.+...... .......+++.+.+.+.+..+.. .+... .+..+++... ..+.
T Consensus 257 ~~~~P~~~~~~~r~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~a~~~~~~~~~ 333 (639)
T 2dkh_A 257 VLIIPREGGHLVRFYVEMDKLDADERVASRNITVEQLIATAQRVLHPYKL---EVKNVPWWSVYEIGQRICAKYDDVVDA 333 (639)
T ss_dssp EEEEECTTSSCEEEEEECC-----------CCCHHHHHHHHHHHHTTSCE---EEEEEEEEEEECCCCEECSCSBSCCCS
T ss_pred EEEEEcCCCcEEEEEEECCCcCcccccccCCCCHHHHHHHHHHHhCcccC---cceeeeEEEecccccchhhhhhccccc
Confidence 899999887 4444322111 11223456666666555432221 12221 2334444321 1222
Q ss_pred -------CCCeeEeccccCccCCcchHHHHHHHHhHHHHHHHHHHHhccCCCcccccccCchhhHHHHHHHhc
Q 011835 370 -------EQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAYILKHDHSRGRLTHEQSNENISMQAWNTL 435 (476)
Q Consensus 370 -------~~rv~liGDAAh~~~P~~G~G~~~Al~da~~la~~l~~~l~~~~~~~~L~~~~~~~~~~~~~w~~~ 435 (476)
.+||+|+|||||.++|+.|||+|+||+||..||+.|+..+++......|. .|++.++..
T Consensus 334 ~~~~~~~~gRV~L~GDAAH~~~P~~GqG~n~ai~DA~nLawkLa~vl~g~a~~~lL~-------~Ye~eR~~~ 399 (639)
T 2dkh_A 334 VATPDSPLPRVFIAGDACHTHSPKAGQGMNFSMQDSFNLGWKLAAVLRKQCAPELLH-------TYSSERQVV 399 (639)
T ss_dssp SCCTTSCCCCEEECGGGTEECCGGGCCTTHHHHHHHHHHHHHHHHHHTTSBCGGGGH-------HHHHHHHHH
T ss_pred cccccCccCcEEEEecccccCCCcccccchhhHHHHHHHHHHHHHHHcCCCcHHHHH-------HHHHHHHHH
Confidence 79999999999999999999999999999999999999987654555666 888777543
No 16
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.96 E-value=7.2e-29 Score=249.80 Aligned_cols=305 Identities=16% Similarity=0.097 Sum_probs=187.8
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCC-CCcc--cc---hHHHHhcCcchhhhhh---cccceeeeCCC
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFT-NNYG--VW---EDEFRDLGLEGCIEHV---WRDTVVYIDED 176 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~-~~~G--~~---~~~l~~~~~~~~~~~~---~~~~~~~~~~~ 176 (476)
..+||+||||||+|+++|+.|++.|++|+|||+..... ...+ ++ ...++.+++.+.+... .....++...+
T Consensus 5 ~~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~g 84 (399)
T 2x3n_A 5 NHIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYHDG 84 (399)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECEEEEEETT
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCcceeEEEeCCC
Confidence 45899999999999999999999999999999875431 1222 22 3456666764433221 11112222212
Q ss_pred CC-EEec------cCc-ceecHHHHHHHHHHHHHHC-CCeEE-EEEEEEEEEcCCceE-EEEecCceEEECceEEEccCC
Q 011835 177 EP-ILIG------RAY-GRVSRHLLHEELLRRCVES-GVSYL-SSKVESITESTSGHR-LVACEHDMIVPCRLATVASGA 245 (476)
Q Consensus 177 ~~-~~~~------~~~-~~i~r~~l~~~L~~~~~~~-gv~i~-~~~v~~i~~~~~~~~-~v~~~~g~~i~a~~vV~A~G~ 245 (476)
.. ..+. ..+ ..++|..|.+.|.+.+.+. |++++ +++|++++.++++++ .|++.+|+++++|+||+|||.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~~~ad~vV~AdG~ 164 (399)
T 2x3n_A 85 ELLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRVLRPRVVVGADGI 164 (399)
T ss_dssp EEEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECCCT
T ss_pred CEEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCCCEEECCEEEECCCC
Confidence 11 1111 112 2589999999999999887 99999 999999998877433 788888888999999999999
Q ss_pred CCCCccccccCCCc---ccceeEEEEEEEeeCCCCCCCceeeeccCCCCCCCccccCCCCCeEEEEEEcCCceEEEEeec
Q 011835 246 ASGKLLEYEVGGPK---VSVQTAYGVEVEVENNPYDPSLMVFMDYRDCTKQEVPSFESDNPTFLYVMPMSSTRVFFEETC 322 (476)
Q Consensus 246 ~S~~~~~~~~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 322 (476)
+|..+..+...... ...+...++...++.. .+.. ..+ +.. ..+++|++|.+++.+.+....
T Consensus 165 ~s~vr~~lg~~~~~~~p~~~~~~~~~~~~~~~~-~~~~-~~~-------------~~~-~~~~~~~~p~~~~~~~~~~~~ 228 (399)
T 2x3n_A 165 ASYVRRRLLDIDVERRPYPSPMLVGTFALAPCV-AERN-RLY-------------VDS-QGGLAYFYPIGFDRARLVVSF 228 (399)
T ss_dssp TCHHHHHTSCCCCCCCCCSSCEEEEEEECCHHH-HHCE-EEE-------------ECT-TSCEEEEEEETTTEEEEEEEC
T ss_pred ChHHHHHhCCCccccCCCCCCceEEEEEEecCC-CCCc-cEE-------------EcC-CCcEEEEEEcCCCEEEEEEEe
Confidence 99643322211111 1112012233222211 0111 111 111 036789999988776665421
Q ss_pred ccCC-----CCCChHHHHHHHHHHHHHcCCcc--cceeEE---EEEEeeCCC---CCCCCCCCeeEeccccCccCCcchH
Q 011835 323 LASK-----DGLPFDILKKKLMARLERLGIQV--LKTYEE---EWSYIPVGG---SLPNTEQRNLAFGAAASMVHPATGY 389 (476)
Q Consensus 323 ~~~~-----~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~---~~~~~p~~~---~~~~~~~rv~liGDAAh~~~P~~G~ 389 (476)
.... ...+. +.+.+.+..+.+.+ ..+... ....+|+.. ..++..+|++|+|||||.++|++||
T Consensus 229 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~lvGDAAh~~~P~~Gq 304 (399)
T 2x3n_A 229 PREEARELMADTRG----ESLRRRLQRFVGDESAEAIAAVTGTSRFKGIPIGYLNLDRYWADNVAMLGDAIHNVHPITGQ 304 (399)
T ss_dssp CHHHHHHHHHSTTS----HHHHHHHHTTCCGGGHHHHHTCCCSTTCEECCCCCEECSCSEETTEEECGGGTEECCGGGCC
T ss_pred CccccccccccCCH----HHHHHHHhhcCCcchhhHHhcCCccceEEechhhcccccccccCcEEEEechhccCCCcccc
Confidence 1100 00112 33444455555444 222111 123445543 2345679999999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHHHhccCC-CcccccccCchhhHHHHHHHhcCc
Q 011835 390 SVVRSLSEAPNYASAIAYILKHDH-SRGRLTHEQSNENISMQAWNTLWP 437 (476)
Q Consensus 390 G~~~Al~da~~la~~l~~~l~~~~-~~~~L~~~~~~~~~~~~~w~~~~~ 437 (476)
|+++||+||..||++|...++.+. ....|. .|++.++....
T Consensus 305 G~~~al~da~~La~~L~~~~~~~~~~~~~l~-------~Y~~~r~~~~~ 346 (399)
T 2x3n_A 305 GMNLAIEDASALADALDLALRDACALEDALA-------GYQAERFPVNQ 346 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSSCHHHHHH-------HHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHhhhcccchHHHHHH-------HHHHHhccHHH
Confidence 999999999999999999876432 234454 77777764443
No 17
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=99.96 E-value=1.6e-27 Score=240.81 Aligned_cols=341 Identities=14% Similarity=0.075 Sum_probs=179.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCc-EEEECCCCCCC-CCccc--c---hHHHHhcCcchhhhhhc---ccceeeeCCC
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGLN-VGLIGPDLPFT-NNYGV--W---EDEFRDLGLEGCIEHVW---RDTVVYIDED 176 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~~-V~liE~~~~~~-~~~G~--~---~~~l~~~~~~~~~~~~~---~~~~~~~~~~ 176 (476)
.+||+||||||+||++|+.|++.|++ |+|||+..... ...|+ + ...++.+|+.+.+.... ....++...+
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~g~g~~l~~~~~~~l~~lg~~~~l~~~~~~~~~~~~~~~~g 83 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGVGINIQPAAVEALAELGLGPALAATAIPTHELRYIDQSG 83 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCCSCEEEECHHHHHHHHHTTCHHHHHHHSEEECEEEEECTTS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcccceeEEEEChHHHHHHHHCCChHHHHhhCCCcceEEEEcCCC
Confidence 47999999999999999999999999 99999876432 22232 2 35566777754443221 1122222222
Q ss_pred CCEE---------eccCcceecHHHHHHHHHHHHHH-CC-CeEE-EEEEEEEEEcCCceEEEEecC---c--eEEECceE
Q 011835 177 EPIL---------IGRAYGRVSRHLLHEELLRRCVE-SG-VSYL-SSKVESITESTSGHRLVACEH---D--MIVPCRLA 239 (476)
Q Consensus 177 ~~~~---------~~~~~~~i~r~~l~~~L~~~~~~-~g-v~i~-~~~v~~i~~~~~~~~~v~~~~---g--~~i~a~~v 239 (476)
.... +..+...++|..|.+.|.+.+.+ .| ++++ +++|++++. ++ .+.|.+.+ | .+++||+|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~-~v~v~~~~~~~g~~~~~~ad~v 161 (410)
T 3c96_A 84 ATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE-RD-GRVLIGARDGHGKPQALGADVL 161 (410)
T ss_dssp CEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ET-TEEEEEEEETTSCEEEEEESEE
T ss_pred CEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec-CC-ccEEEEecCCCCCceEEecCEE
Confidence 2111 11122468999999999999976 36 5888 999999988 55 45666655 6 57999999
Q ss_pred EEccCCCCCCccccccCCCcccceeEEEEEEEeeCCCCCCCceeeeccCCCCCCCccccCCCCCeEEEEEEcCC-----c
Q 011835 240 TVASGAASGKLLEYEVGGPKVSVQTAYGVEVEVENNPYDPSLMVFMDYRDCTKQEVPSFESDNPTFLYVMPMSS-----T 314 (476)
Q Consensus 240 V~A~G~~S~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-----~ 314 (476)
|+|||.+|..+..+........+.....+.......+.......++ . .....++++++|..+ +
T Consensus 162 V~AdG~~S~vR~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~-----------~~~~~~~~~~~p~~~~~~~~g 229 (410)
T 3c96_A 162 VGADGIHSAVRAHLHPDQRPLSHGGITMWRGVTEFDRFLDGKTMIV-A-----------NDEHWSRLVAYPISARHAAEG 229 (410)
T ss_dssp EECCCTTCHHHHHHCTTCCCCEEEEEEEEEEEEEESCCTTSSEEEE-E-----------ECTTCCEEEEEECCHHHHTTT
T ss_pred EECCCccchhHHHhcCCCCCCCcCCeeEEEeecccccccCCCeEEE-e-----------cCCCCcEEEEEecCCcccCCC
Confidence 9999999965444332211111211111111122122222211111 0 111235677888753 2
Q ss_pred --eEEEEeeccc-------CCCCCChHHHHHHHHHHHHHcCCc---ccceeE--EEEEEeeC---CCCCCCCCCCeeEec
Q 011835 315 --RVFFEETCLA-------SKDGLPFDILKKKLMARLERLGIQ---VLKTYE--EEWSYIPV---GGSLPNTEQRNLAFG 377 (476)
Q Consensus 315 --~~~~~~~~~~-------~~~~~~~~~~~~~l~~~~~~~~~~---~~~~~~--~~~~~~p~---~~~~~~~~~rv~liG 377 (476)
.+.+...... ...........+.+.+.+..+... +..++. .....+|+ .....+..+||+|+|
T Consensus 230 ~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~grv~LvG 309 (410)
T 3c96_A 230 KSLVNWVCMVPSAAVGQLDNEADWNRDGRLEDVLPFFADWDLGWFDIRDLLTRNQLILQYPMVDRDPLPHWGRGRITLLG 309 (410)
T ss_dssp CEEEEEEEEEEHHHHCCCCSSCCTTCBCCHHHHHHHHTTCCBTTBCHHHHHHTCSEEEEEEEEECCCCSCCCBTTEEECT
T ss_pred CcEEEEEEEecCcccccCCCccccCCCCCHHHHHHHhcCCCCchhHHHHHHhcCcccceeecccCCCccccccCCEEEEe
Confidence 2222111000 011111111123334444433221 111111 11222333 222356679999999
Q ss_pred cccCccCCcchHHHHHHHHhHHHHHHHHHHHhccCCCcccccccCchhhHHHHHHHhcCcHHHHHHH-HHHHh-hHHHHh
Q 011835 378 AAASMVHPATGYSVVRSLSEAPNYASAIAYILKHDHSRGRLTHEQSNENISMQAWNTLWPQERKRQR-AFFLF-GLALIL 455 (476)
Q Consensus 378 DAAh~~~P~~G~G~~~Al~da~~la~~l~~~l~~~~~~~~L~~~~~~~~~~~~~w~~~~~~e~~~~~-~~~~~-~~~~~~ 455 (476)
||||.++|++|||+|+||+||..||++|... +.....|. .|++.++.....-....+ .+..+ ..+...
T Consensus 310 DAAh~~~P~~GqG~n~ai~Da~~La~~L~~~---~~~~~~L~-------~Ye~~r~~~~~~~~~~s~~~~~~~~~~~~~~ 379 (410)
T 3c96_A 310 DAAHLMYPMGANGASQAILDGIELAAALARN---ADVAAALR-------EYEEARRPTANKIILANREREKEEWAAASRP 379 (410)
T ss_dssp HHHHCCCSSTTCTHHHHHHHHHHHHHHHHHC---SSHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred cccCCCCCccchhHHHHHHHHHHHHHHHhcc---CCHHHHHH-------HHHHHHHHHHHHHHHHhHHHHHhhhhhhhcc
Confidence 9999999999999999999999999999863 22234455 788777644332222222 11111 111111
Q ss_pred -cCChHHHHHHHHHhhc
Q 011835 456 -QLDIEGIRTFFRTFFR 471 (476)
Q Consensus 456 -~l~~~~~~~~~~~f~~ 471 (476)
..+.+++.++...|+.
T Consensus 380 ~~~~~~~~~~~~~~~~~ 396 (410)
T 3c96_A 380 KTEKSAALEAITGSYRN 396 (410)
T ss_dssp -----------------
T ss_pred CCCCHHHHHHHHHHhhh
Confidence 2355566666666654
No 18
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.95 E-value=6.8e-27 Score=245.76 Aligned_cols=321 Identities=15% Similarity=0.122 Sum_probs=187.7
Q ss_pred CcccEEEECCCHHHHHHHHHHHHc------CCcEEEECCCCCCCCC--cc--cchHHHHhcCcchhhh-------hhccc
Q 011835 106 GILDLVVIGCGPAGLALAAESAKL------GLNVGLIGPDLPFTNN--YG--VWEDEFRDLGLEGCIE-------HVWRD 168 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~------G~~V~liE~~~~~~~~--~G--~~~~~l~~~~~~~~~~-------~~~~~ 168 (476)
..+||+|||||||||++|+.|++. |++|+||||....... .| +....++.+ +..... .....
T Consensus 34 ~~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~l~~~~l~~l-l~~~~~~g~~~~~~~~~~ 112 (584)
T 2gmh_A 34 EEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEEL-FPDWKEKGAPLNTPVTED 112 (584)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEECTHHHHHH-CTTHHHHTCCCCEECCEE
T ss_pred cCCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccccccccCHHHHHHH-HHHHHhcCCceeeeechh
Confidence 358999999999999999999999 9999999997654332 12 233333332 111100 00001
Q ss_pred ceeeeCCCCCEEe---------ccCcceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCc-eEEEEecC------c
Q 011835 169 TVVYIDEDEPILI---------GRAYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSG-HRLVACEH------D 231 (476)
Q Consensus 169 ~~~~~~~~~~~~~---------~~~~~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~-~~~v~~~~------g 231 (476)
...++.......+ ......++|..|.+.|.+.+++.||+++ +++|+++..++++ +++|.+.+ |
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G 192 (584)
T 2gmh_A 113 RFGILTEKYRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDG 192 (584)
T ss_dssp EEEEECSSCEEECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTS
T ss_pred heeeeccCCCccccccCccccccCCCEEEeHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCC
Confidence 1111111111111 1112358999999999999999999999 9999999987654 45577653 3
Q ss_pred ---------eEEECceEEEccCCCCCCcccc----ccCCCcccceeEEEEE--EEeeCCCCCCCce-eeeccCCCCCCCc
Q 011835 232 ---------MIVPCRLATVASGAASGKLLEY----EVGGPKVSVQTAYGVE--VEVENNPYDPSLM-VFMDYRDCTKQEV 295 (476)
Q Consensus 232 ---------~~i~a~~vV~A~G~~S~~~~~~----~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~ 295 (476)
.+++||+||+|||.+|.....+ .............++. +.++.....+... .++.+..
T Consensus 193 ~~~~~~~~g~~i~Ad~VV~AdG~~S~vr~~l~~~~gl~~~~~p~~~g~g~~~~~~v~~~~~~~~~~~~~~g~~~------ 266 (584)
T 2gmh_A 193 APKTTFERGLELHAKVTIFAEGCHGHLAKQLYKKFDLRANCEPQTYGIGLKELWVIDEKKWKPGRVDHTVGWPL------ 266 (584)
T ss_dssp CEEEEEECCCEEECSEEEECCCTTCHHHHHHHHHTTTTTTSCCCCEEEEEEEEEECCGGGCCTTEEEEEEETTS------
T ss_pred CcccccCCceEEECCEEEEeeCCCchHHHHHHHHhCCCCCCCchhHHhhhhhheecCcccccCCeEEEEEeccc------
Confidence 5799999999999999643322 1111111111122322 2233222222221 1112110
Q ss_pred cccCCCCCeEEEEEEcC--CceEEEEeecccCCC--CCChHHHHHHHHHHHHHcCCccc------ceeEEEEEEeeCCC-
Q 011835 296 PSFESDNPTFLYVMPMS--STRVFFEETCLASKD--GLPFDILKKKLMARLERLGIQVL------KTYEEEWSYIPVGG- 364 (476)
Q Consensus 296 ~~~~~~~~~~~~~~p~~--~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~p~~~- 364 (476)
.....+..|++|.. ++++.++........ .... .+.+.+++. .+.+. +........++..+
T Consensus 267 ---~~~~~gg~~~~~~~~~~~~~~vg~~~~~~~~~~~~~~---~~~l~~~~~--~p~i~~~l~~~~~~~~~~~~~~~~~~ 338 (584)
T 2gmh_A 267 ---DRHTYGGSFLYHLNEGEPLLALGFVVGLDYQNPYLSP---FREFQRWKH--HPSIKPTLEGGKRIAYGARALNEGGF 338 (584)
T ss_dssp ---CTTSCEEEEEEECCSSSCEEEEEEEEETTCCCTTCCH---HHHHHHHTT--STTTHHHHTTCEEEEEEEEEEECCGG
T ss_pred ---cCCcCCceEEEEecCCCCeEEEEEEEecCcccccCCh---HHHHHHHHh--ChHHHHHhCCCeEEEecceEccCCCc
Confidence 11112345677877 778877765432221 1111 122222211 11111 22221111222222
Q ss_pred --CCCCCCCCeeEeccccCccCCcchHHHHHHHHhHHHHHHHHHHHhccC--CCccc---ccccCchhhHHHHHHHhcC-
Q 011835 365 --SLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAYILKHD--HSRGR---LTHEQSNENISMQAWNTLW- 436 (476)
Q Consensus 365 --~~~~~~~rv~liGDAAh~~~P~~G~G~~~Al~da~~la~~l~~~l~~~--~~~~~---L~~~~~~~~~~~~~w~~~~- 436 (476)
...+..+|++|+|||||+++|+.|+|+++||+||..||++|..+++.+ ...+. |. .|++.|+..|
T Consensus 339 ~~~~~~~~~rv~LvGDAAh~~~P~~GqG~~~Ai~da~~LA~~L~~~~~~g~~~~~~a~~~L~-------~Ye~~r~~~~v 411 (584)
T 2gmh_A 339 QSIPKLTFPGGLLIGCSPGFMNVPKIKGTHTAMKSGTLAAESIFNQLTSENLQSKTIGLHVT-------EYEDNLKNSWV 411 (584)
T ss_dssp GGCCCCEETTEEECTTTTCCCBTTTTBCHHHHHHHHHHHHHHHHHHHTCCCCCCSSSSCCCT-------HHHHHHHTSHH
T ss_pred ccCCccccCCEEEEcccccccCccccccHHHHHHHHHHHHHHHHHHHHcCCcchhhhhhhHH-------HHHHHHHHhHH
Confidence 224567999999999999999999999999999999999999998654 22332 76 9999998774
Q ss_pred cHHHHHHHHHHH
Q 011835 437 PQERKRQRAFFL 448 (476)
Q Consensus 437 ~~e~~~~~~~~~ 448 (476)
.++++..+.++.
T Consensus 412 ~~~l~~~r~~~~ 423 (584)
T 2gmh_A 412 WKELYSVRNIRP 423 (584)
T ss_dssp HHHHHHTTTTTG
T ss_pred HHHHHHHhChhH
Confidence 566666665533
No 19
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.95 E-value=1.2e-27 Score=239.15 Aligned_cols=297 Identities=15% Similarity=0.105 Sum_probs=175.5
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCC-Cccc--c---hHHHHhcCcchhhhhhc---ccceeeeCCCC
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTN-NYGV--W---EDEFRDLGLEGCIEHVW---RDTVVYIDEDE 177 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~-~~G~--~---~~~l~~~~~~~~~~~~~---~~~~~~~~~~~ 177 (476)
.+||+||||||+|+++|+.|++.|++|+|||+...... ..|+ + ...++.+++.+.+.... ....++.. +.
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~-g~ 89 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMH-NK 89 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEEET-TE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEEeC-Cc
Confidence 47999999999999999999999999999998765432 2222 2 34556667644332211 11222222 21
Q ss_pred CE-Ee---ccCcceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCCCCccc
Q 011835 178 PI-LI---GRAYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGKLLE 252 (476)
Q Consensus 178 ~~-~~---~~~~~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S~~~~~ 252 (476)
.. .. +.+...++|..|.+.|.+.+.+.|++++ +++|++++. ++ .|++.+|+++++|+||+|||.+|.....
T Consensus 90 ~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~~--~v~~~~g~~~~ad~vV~AdG~~s~vr~~ 165 (379)
T 3alj_A 90 SVSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADP--VG--RLTLQTGEVLEADLIVGADGVGSKVRDS 165 (379)
T ss_dssp EEEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET--TT--EEEETTSCEEECSEEEECCCTTCHHHHH
T ss_pred eeeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe--CC--EEEECCCCEEEcCEEEECCCccHHHHHH
Confidence 11 11 2234578999999999999999999999 999999987 43 7788888889999999999999964333
Q ss_pred cccCCCcccceeEEEEEEEeeCC----CCC-CCce-eeeccCCCCCCCccccCCCCCeEEEEEEcCCceEEEEeecccCC
Q 011835 253 YEVGGPKVSVQTAYGVEVEVENN----PYD-PSLM-VFMDYRDCTKQEVPSFESDNPTFLYVMPMSSTRVFFEETCLASK 326 (476)
Q Consensus 253 ~~~~~~~~~~~~~~g~~~~~~~~----~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 326 (476)
+... ....+.....+...++.. +.. +... ..+.+ . ...+++|++|.++++..+..+.....
T Consensus 166 l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~-~~~~~~~~~p~~~~~~~~~~~~~~~~ 232 (379)
T 3alj_A 166 IGFK-QDRWVSKDGLIRLIVPRMKKELGHGEWDNTIDMWNF-----------W-PRVQRILYSPCNENELYLGLMAPAAD 232 (379)
T ss_dssp HCCC-EEEEEEEEEEEEEEEECCHHHHCSSCTTSEEEEECC-----------S-SSCCEEEEEECSSSEEEEEEEECTTC
T ss_pred hcCC-CCcCcCCcEEEEEEechhhccCCcCCcccccccceE-----------E-CCCCEEEEEECCCCcEEEEEEecCCC
Confidence 2211 111111111222222321 111 1111 11000 1 12468899999998766654432111
Q ss_pred CCCChHHHHHHHHHHHHHcC---Ccc-----cceeEEEEEEeeCCCCCCCCCCCeeEeccccCccCCcchHHHHHHHHhH
Q 011835 327 DGLPFDILKKKLMARLERLG---IQV-----LKTYEEEWSYIPVGGSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEA 398 (476)
Q Consensus 327 ~~~~~~~~~~~l~~~~~~~~---~~~-----~~~~~~~~~~~p~~~~~~~~~~rv~liGDAAh~~~P~~G~G~~~Al~da 398 (476)
+. .+.+.+.+........ ..+ ..+.. +..+......++..+|++|+|||||.++|++|||+|+||+||
T Consensus 233 ~~--~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~rv~lvGDAAh~~~P~~GqG~~~ai~da 308 (379)
T 3alj_A 233 PR--GSSVPIDLEVWVEMFPFLEPCLIEAAKLKTAR--YDKYETTKLDSWTRGKVALVGDAAHAMCPALAQGAGCAMVNA 308 (379)
T ss_dssp TT--TTCSSCCHHHHHHHCGGGHHHHHHHHTCTTCC--EEEEEEEEESCSEETTEEECTHHHHCCCGGGSCHHHHHHHHH
T ss_pred CC--HHHHHHHHhcCCchhccHHHHHhhCCccceEE--ecccccCCCCCcccCcEEEEEcccCCCCcchhhhHHHHHHHH
Confidence 10 1112122222111110 000 01111 111111112245568999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCCcccccccCchhhHHHHHHHhc
Q 011835 399 PNYASAIAYILKHDHSRGRLTHEQSNENISMQAWNTL 435 (476)
Q Consensus 399 ~~la~~l~~~l~~~~~~~~L~~~~~~~~~~~~~w~~~ 435 (476)
..||++|... .+....|. .|++.++..
T Consensus 309 ~~La~~L~~~---~~~~~~l~-------~Y~~~r~~~ 335 (379)
T 3alj_A 309 FSLSQDLEEG---SSVEDALV-------AWETRIRPI 335 (379)
T ss_dssp HHHHHHTTSS---SCHHHHHH-------HHHHHHHHH
T ss_pred HHHHHHhccc---cCHHHHHH-------HHHHHHHHH
Confidence 9999998742 11123444 777766543
No 20
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=99.95 E-value=9.8e-27 Score=243.32 Aligned_cols=297 Identities=14% Similarity=0.127 Sum_probs=179.0
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCC---Ccccc---hHHHHhcCcchhhhhhc---cc--ceeeeC
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTN---NYGVW---EDEFRDLGLEGCIEHVW---RD--TVVYID 174 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~---~~G~~---~~~l~~~~~~~~~~~~~---~~--~~~~~~ 174 (476)
..+||+||||||+||++|+.|++.|++|+||||...... ..++. .+.++.+|+.+.+.... .. ...+..
T Consensus 25 ~~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~ 104 (549)
T 2r0c_A 25 IETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHPRVGTIGPRSMELFRRWGVAKQIRTAGWPGDHPLDAAWVT 104 (549)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSCCCCEECHHHHHHHHHTTCHHHHHTSSCCTTSBCCEEEES
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCChHHHHhhcCCcccccceEEec
Confidence 458999999999999999999999999999999764432 22332 34566677644332211 00 011111
Q ss_pred --CCCCE-Ee--------------ccCcceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecC---c--
Q 011835 175 --EDEPI-LI--------------GRAYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEH---D-- 231 (476)
Q Consensus 175 --~~~~~-~~--------------~~~~~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~---g-- 231 (476)
.+... .+ ..+...+++..+.+.|.+.+.+. ++ +++|++++.+++ .+.+++.+ |
T Consensus 105 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~---v~~~~~v~~~~~~~~-~v~v~~~~~~~G~~ 180 (549)
T 2r0c_A 105 RVGGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER---LRTRSRLDSFEQRDD-HVRATITDLRTGAT 180 (549)
T ss_dssp SBTSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG---EECSEEEEEEEECSS-CEEEEEEETTTCCE
T ss_pred cCCCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHHh---cccCcEEEEEEEeCC-EEEEEEEECCCCCE
Confidence 11110 00 11223688999999999999776 77 999999998877 45566654 5
Q ss_pred eEEECceEEEccCCCCCCccccccCCCccc-ceeEEEEEEEeeCCCCC------CCceeeeccCCCCCCCccccCCCCCe
Q 011835 232 MIVPCRLATVASGAASGKLLEYEVGGPKVS-VQTAYGVEVEVENNPYD------PSLMVFMDYRDCTKQEVPSFESDNPT 304 (476)
Q Consensus 232 ~~i~a~~vV~A~G~~S~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (476)
.+++||+||+|||.+|..+..+........ .+..+.. .++..... +....+. +.+. .+
T Consensus 181 ~~i~a~~vVgADG~~S~vR~~lg~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~------------~~p~-~~ 245 (549)
T 2r0c_A 181 RAVHARYLVACDGASSPTRKALGIDAPPRHRTQVFRNI--LFRAPELRSLLGERAALFFFL------------MLSS-SL 245 (549)
T ss_dssp EEEEEEEEEECCCTTCHHHHHHTCCCCBSSCCEEEEEE--EEECTTHHHHHGGGCCSEEEE------------EEET-TE
T ss_pred EEEEeCEEEECCCCCcHHHHHcCCCCCCCcccceEEEE--EEECCchHHhcCCCCceEEEE------------ECCC-Cc
Confidence 579999999999999964433322111111 1222222 23321110 0001110 0111 14
Q ss_pred EEEEEEcCCc-eEEEEeecccCCCCCChHHHHHHHHHHHHHcCCcccceeEEEEEEeeCCC--CCCCCCCCeeEeccccC
Q 011835 305 FLYVMPMSST-RVFFEETCLASKDGLPFDILKKKLMARLERLGIQVLKTYEEEWSYIPVGG--SLPNTEQRNLAFGAAAS 381 (476)
Q Consensus 305 ~~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~p~~~--~~~~~~~rv~liGDAAh 381 (476)
+++++|..++ .+.+.... .... .+.+++.+.+.+.+.. .... ++.. ...+++.. ...+..+||+|+|||||
T Consensus 246 ~~~~~p~~~~~~~~~~~~~-~~~~-~~~~~~~~~l~~~~~~-~~~~-~~~~--~~~~~~~~~~a~~~~~grv~L~GDAAH 319 (549)
T 2r0c_A 246 RFPLRALDGRGLYRLTVGV-DDAS-KSTMDSFELVRRAVAF-DTEI-EVLS--DSEWHLTHRVADSFSAGRVFLTGDAAH 319 (549)
T ss_dssp EEEEEESSSSSEEEEEEEC-STTC-CSCCCHHHHHHHHBCS-CCCC-EEEE--EEEEEECCEECSCSEETTEEECGGGTE
T ss_pred EEEEEEECCCcEEEEEecC-CCCC-CCHHHHHHHHHHHhCC-CCce-eEEE--EecchhHhhhHHhhcCCcEEEEccccc
Confidence 5778888653 33333211 1111 3344555555555432 1111 2222 22334322 22345799999999999
Q ss_pred ccCCcchHHHHHHHHhHHHHHHHHHHHhccCCCcccccccCchhhHHHHHHHh
Q 011835 382 MVHPATGYSVVRSLSEAPNYASAIAYILKHDHSRGRLTHEQSNENISMQAWNT 434 (476)
Q Consensus 382 ~~~P~~G~G~~~Al~da~~la~~l~~~l~~~~~~~~L~~~~~~~~~~~~~w~~ 434 (476)
.++|+.|||+|+||+||..|++.|+..+++......|. .|++.++.
T Consensus 320 ~~~P~~GqG~n~gi~DA~~La~~La~~l~g~a~~~lL~-------~Y~~eR~~ 365 (549)
T 2r0c_A 320 TLSPSGGFGMNTGIGSAADLGWKLAATLRGWAGPGLLA-------TYEEERRP 365 (549)
T ss_dssp ECCCGGGHHHHHHHHHHHHHHHHHHHHHHTCSCTTTTH-------HHHHHHHH
T ss_pred cCCCccCCccccccHHHHHHHHHHHHHHcCCCCHHHHH-------HHHHHHHH
Confidence 99999999999999999999999999887654556666 78777753
No 21
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.95 E-value=3.4e-27 Score=237.47 Aligned_cols=306 Identities=14% Similarity=0.116 Sum_probs=176.1
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCC-----Ccccc----hHHHHhcCcchhhhhhcc--cceeeeC
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTN-----NYGVW----EDEFRDLGLEGCIEHVWR--DTVVYID 174 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~-----~~G~~----~~~l~~~~~~~~~~~~~~--~~~~~~~ 174 (476)
..+||+||||||+||++|+.|++.|++|+|||+...... .+.++ ...++.+++.+.+..... ...++..
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~ 104 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYDLALPMGVNIADE 104 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHHHCBCCCEEEECS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHHhhcccceEEECC
Confidence 457999999999999999999999999999998754321 12222 456777777544432111 0111211
Q ss_pred CCCCEEec--------cCcceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccCC
Q 011835 175 EDEPILIG--------RAYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGA 245 (476)
Q Consensus 175 ~~~~~~~~--------~~~~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~ 245 (476)
.+ ..... .....++|..|.+.|.+.+.+ ++++ +++|++++.+++ .+.|++.+|+++++|+||+|||.
T Consensus 105 ~g-~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~-~v~v~~~~g~~~~ad~vV~AdG~ 180 (398)
T 2xdo_A 105 KG-NILSTKNVKPENRFDNPEINRNDLRAILLNSLEN--DTVIWDRKLVMLEPGKK-KWTLTFENKPSETADLVILANGG 180 (398)
T ss_dssp SS-EEEEECCCGGGTTSSCCEECHHHHHHHHHHTSCT--TSEEESCCEEEEEECSS-SEEEEETTSCCEEESEEEECSCT
T ss_pred CC-CchhhccccccCCCCCceECHHHHHHHHHhhcCC--CEEEECCEEEEEEECCC-EEEEEECCCcEEecCEEEECCCc
Confidence 11 11111 112358999999999887753 6788 999999998876 57788889988999999999999
Q ss_pred CCCCccccccCCCcccceeEEEEEEEeeCCCC-CCCceeeeccCCCCCCCccccCCCCCeEEEEEEcCCceEEEEeeccc
Q 011835 246 ASGKLLEYEVGGPKVSVQTAYGVEVEVENNPY-DPSLMVFMDYRDCTKQEVPSFESDNPTFLYVMPMSSTRVFFEETCLA 324 (476)
Q Consensus 246 ~S~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 324 (476)
+|..+..+....+ .+.....+...+..... .+....+..... .........+++.|..++.+.+......
T Consensus 181 ~S~vR~~l~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~-------~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 251 (398)
T 2xdo_A 181 MSKVRKFVTDTEV--EETGTFNIQADIHQPEINCPGFFQLCNGNR-------LMASHQGNLLFANPNNNGALHFGISFKT 251 (398)
T ss_dssp TCSCCTTTCCCCC--EEEEEEEEEEEESSHHHHSHHHHHHHTTSE-------EEEEETTEEEEEEEEETTEEEEEEEEEC
T ss_pred chhHHhhccCCCc--eEcceEEEEEEeCchhccCchhHhhcCCce-------EEEecCCCeEEEEeCCCCcEEEEEEEec
Confidence 9976554432111 12111222222221100 000000000000 0000112345556777776555432111
Q ss_pred CC--------CCCChHHHHHHHHHHHHHcCCcccceeE-----EEEEEeeCCCCCCCCC-C--CeeEeccccCccCCcch
Q 011835 325 SK--------DGLPFDILKKKLMARLERLGIQVLKTYE-----EEWSYIPVGGSLPNTE-Q--RNLAFGAAASMVHPATG 388 (476)
Q Consensus 325 ~~--------~~~~~~~~~~~l~~~~~~~~~~~~~~~~-----~~~~~~p~~~~~~~~~-~--rv~liGDAAh~~~P~~G 388 (476)
.. ...+.+...+.+.+.+..+.+.+.+++. ..+....+.....+.. + |++|+|||||.++|+.|
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~LiGDAAh~~~P~~G 331 (398)
T 2xdo_A 252 PDEWKNQTQVDFQNRNSVVDFLLKEFSDWDERYKELIHTTLSFVGLATRIFPLEKPWKSKRPLPITMIGDAAHLMPPFAG 331 (398)
T ss_dssp CTTC---CCSCTTCHHHHHHHHHHHTTTSCHHHHHHHHHCSCCEEEEEEECCCCSCCCSCCSSCEEECTHHHHCCCCTTS
T ss_pred CcccccccccCcCCHHHHHHHHHHHHcCCChHHHHHHhCcccceeeeeEeccCCCCcccCCCccEEEEeehhccCCCccC
Confidence 11 1123445555555554433222211110 1122222211223433 5 89999999999999999
Q ss_pred HHHHHHHHhHHHHHHHHHHHhccCC-CcccccccCchhhHHHHHHH
Q 011835 389 YSVVRSLSEAPNYASAIAYILKHDH-SRGRLTHEQSNENISMQAWN 433 (476)
Q Consensus 389 ~G~~~Al~da~~la~~l~~~l~~~~-~~~~L~~~~~~~~~~~~~w~ 433 (476)
||+|+||+||..||++|... .++ ....|. .|++.++
T Consensus 332 qG~n~ai~Da~~La~~L~~~--~~~~~~~~L~-------~Y~~~r~ 368 (398)
T 2xdo_A 332 QGVNSGLVDALILSDNLADG--KFNSIEEAVK-------NYEQQMF 368 (398)
T ss_dssp CSHHHHHHHHHHHHHHHHSC--CSSSHHHHHH-------HHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHhc--cCchHHHHHH-------HHHHHHH
Confidence 99999999999999999864 121 133444 6776664
No 22
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.95 E-value=4.9e-27 Score=236.25 Aligned_cols=144 Identities=13% Similarity=0.051 Sum_probs=102.2
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCC--Cccc--c---hHHHHhcCcchhhhhh--cccceeeeC-C
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTN--NYGV--W---EDEFRDLGLEGCIEHV--WRDTVVYID-E 175 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~--~~G~--~---~~~l~~~~~~~~~~~~--~~~~~~~~~-~ 175 (476)
..+||+||||||+||++|+.|++.|++|+|||+...... ..|+ + ...++.+++.. .... .....++.. .
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~-~~~~~~~~~~~~~~~~~ 82 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVEL-DSISVPSSSMEYVDALT 82 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCG-GGTCBCCCEEEEEETTT
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccccccChhHHHHHHHcCCcc-ccccccccceEEEecCC
Confidence 457999999999999999999999999999998765311 2232 2 34566777654 1111 111222222 2
Q ss_pred CCCE-EeccCcceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCCCCcccc
Q 011835 176 DEPI-LIGRAYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGKLLEY 253 (476)
Q Consensus 176 ~~~~-~~~~~~~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S~~~~~~ 253 (476)
+... ....+...+.+..|.+.|.+.+ .|++++ +++|++++.+++ .+.|++.+|+++++|+||+|||.+|..+..+
T Consensus 83 g~~~~~~~~~~~~~~~~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~-~v~v~~~~g~~~~ad~vV~AdG~~S~vr~~~ 159 (397)
T 2vou_A 83 GERVGSVPADWRFTSYDSIYGGLYELF--GPERYHTSKCLVGLSQDSE-TVQMRFSDGTKAEANWVIGADGGASVVRKRL 159 (397)
T ss_dssp CCEEEEEECCCCEEEHHHHHHHHHHHH--CSTTEETTCCEEEEEECSS-CEEEEETTSCEEEESEEEECCCTTCHHHHHH
T ss_pred CCccccccCcccccCHHHHHHHHHHhC--CCcEEEcCCEEEEEEecCC-EEEEEECCCCEEECCEEEECCCcchhHHHHh
Confidence 2221 1122333577888988888876 589999 999999998877 5778899998899999999999999654433
No 23
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=99.93 E-value=1e-25 Score=225.28 Aligned_cols=287 Identities=16% Similarity=0.136 Sum_probs=165.5
Q ss_pred ccEEEECCCHHHHHHHHHHHHc--CCcEEEECCCCCCCC-Ccc--cchHHHH---hcCcc-hh-hhh---hcccceeeeC
Q 011835 108 LDLVVIGCGPAGLALAAESAKL--GLNVGLIGPDLPFTN-NYG--VWEDEFR---DLGLE-GC-IEH---VWRDTVVYID 174 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~--G~~V~liE~~~~~~~-~~G--~~~~~l~---~~~~~-~~-~~~---~~~~~~~~~~ 174 (476)
.||+||||||+||++|+.|++. |++|+|||+...... ..| ++...+. ..++. .. +.. .+....+..
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 79 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSYLDAPERLNPQFLEDFKLVH- 79 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTCCCCSEEEEESCTTTCTTCGGGGSSCGGGGCCEEECCEEEEE-
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCCcceeEEEeCcHHHHhhcCcchhhhhhHHHhhccccceEEEe-
Confidence 3899999999999999999999 999999999765421 111 1111111 11111 11 111 111122222
Q ss_pred CCCCEEe--ccCcceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCCCCcc
Q 011835 175 EDEPILI--GRAYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGKLL 251 (476)
Q Consensus 175 ~~~~~~~--~~~~~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S~~~~ 251 (476)
.+..... +.++..++|..|.+.|.+.+.+.|++++ +++|++++.. .++++|+||+|||.+|. +.
T Consensus 80 ~g~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~------------~~~~ad~vV~AdG~~S~-R~ 146 (381)
T 3c4a_A 80 HNEPSLMSTGVLLCGVERRGLVHALRDKCRSQGIAIRFESPLLEHGEL------------PLADYDLVVLANGVNHK-TA 146 (381)
T ss_dssp SSSEEECCCCSCEEEEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGGC------------CGGGCSEEEECCGGGGG-TC
T ss_pred CCeeEEecCCCceeeecHHHHHHHHHHHHHHCCCEEEeCCEeccchhc------------ccccCCEEEECCCCCch-HH
Confidence 2221111 2233468999999999999998999999 9999877531 12579999999999997 54
Q ss_pred ccccC-CCcc-cceeEEEEEEEeeCCCCCCCceeeeccCCCCCCCccccCCCCCeEE--EEEEcCCceEEEEeecc----
Q 011835 252 EYEVG-GPKV-SVQTAYGVEVEVENNPYDPSLMVFMDYRDCTKQEVPSFESDNPTFL--YVMPMSSTRVFFEETCL---- 323 (476)
Q Consensus 252 ~~~~~-~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~p~~~~~~~~~~~~~---- 323 (476)
.+... .... .+...+.+.. +. ...+ ....++.. . ..+++ +.+|.+++...+.....
T Consensus 147 ~l~~~~g~~~~~~~~~~~~~~-~~-~~~~-~~~~~~~~-----------~--~~g~~~~~~~p~~~~~~~~~~~~~~~~~ 210 (381)
T 3c4a_A 147 HFTEALVPQVDYGRNKYIWYG-TS-QLFD-QMNLVFRT-----------H--GKDIFIAHAYKYSDTMSTFIVECSEETY 210 (381)
T ss_dssp CSSGGGCCCCEEEEEEEEEEE-ES-SCCS-SEEEEEEE-----------E--TTEEEEEEEEECSSSCEEEEEEECHHHH
T ss_pred hhhhhcCCCcccCCccEEEEe-cC-CCCC-cceeeEee-----------C--CCcEEEEEEEEecCCeEEEEEECCcccc
Confidence 44211 1111 1111111111 11 1111 11111110 1 22433 36898877644432211
Q ss_pred --cCCCCCChHHHHHHHHHHHHHcCCcccceeEE---EEEEeeCCCCCCCCCCCeeEeccccCccCCcchHHHHHHHHhH
Q 011835 324 --ASKDGLPFDILKKKLMARLERLGIQVLKTYEE---EWSYIPVGGSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEA 398 (476)
Q Consensus 324 --~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~---~~~~~p~~~~~~~~~~rv~liGDAAh~~~P~~G~G~~~Al~da 398 (476)
...+..+.+...+.+.+.+..+.+.. +++.. .+..+.......+..+|++|+|||||.++|+.|||+|+||+||
T Consensus 211 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~grv~LvGDAAh~~~P~~GqG~~~al~Da 289 (381)
T 3c4a_A 211 ARARLGEMSEEASAEYVAKVFQAELGGH-GLVSQPGLGWRNFMTLSHDRCHDGKLVLLGDALQSGHFSIGHGTTMAVVVA 289 (381)
T ss_dssp HHTTSSSSCHHHHHHHHHHHTHHHHTTC-CCBCCTTTCSEEEEECCCSCSEETTEEECGGGTCCCCGGGCCHHHHHHHHH
T ss_pred ccCCcccCChHHHHHHHHHHhcccCCCc-hhhcCCCcceeeeccccCCCcccCCEEEEEccccccCCCccccHHHHHHHH
Confidence 11123345566777777776653322 22221 1222222223456679999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCCcccccccCchhhHHHHHHHhc
Q 011835 399 PNYASAIAYILKHDHSRGRLTHEQSNENISMQAWNTL 435 (476)
Q Consensus 399 ~~la~~l~~~l~~~~~~~~L~~~~~~~~~~~~~w~~~ 435 (476)
..||++|... .+....|. .|++.++..
T Consensus 290 ~~La~~L~~~---~~~~~aL~-------~Y~~~r~~~ 316 (381)
T 3c4a_A 290 QLLVKALCTE---DGVPAALK-------RFEERALPL 316 (381)
T ss_dssp HHHHHHHHHS---SSHHHHHH-------HHHHHHHHH
T ss_pred HHHHHHHhcc---ccHHHHHH-------HHHHHHHHH
Confidence 9999999874 22233444 777766543
No 24
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=99.93 E-value=1.1e-24 Score=226.92 Aligned_cols=303 Identities=16% Similarity=0.151 Sum_probs=176.6
Q ss_pred CcccEEEECCCHHHHHHHHHHHH------------cCCcEEEECCCCCCCCCcc--cc---hHHHHhcCcchh--hhhh-
Q 011835 106 GILDLVVIGCGPAGLALAAESAK------------LGLNVGLIGPDLPFTNNYG--VW---EDEFRDLGLEGC--IEHV- 165 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~------------~G~~V~liE~~~~~~~~~G--~~---~~~l~~~~~~~~--~~~~- 165 (476)
..+||+||||||||+++|+.|++ .|++|+|||+........| ++ ...++.+|+.+. +...
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~~~~~g~g~~~~p~~~~~l~~lGi~e~~~~~~~~ 85 (526)
T 2pyx_A 6 PITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPDVATIGVGEGTWPSMRSTLSKIGIDENDFIRQCD 85 (526)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSSCCCCCSCEECCTHHHHHHHHHTCCHHHHHHHTT
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCCCCCcceeeechHhHHHHHHHcCCCHHHHHHHcC
Confidence 35799999999999999999999 9999999998643222222 22 345666777543 3221
Q ss_pred -----------ccc-------cee--eeCCC-----CCE------------------------------------E--ec
Q 011835 166 -----------WRD-------TVV--YIDED-----EPI------------------------------------L--IG 182 (476)
Q Consensus 166 -----------~~~-------~~~--~~~~~-----~~~------------------------------------~--~~ 182 (476)
|.. ... .+..+ ... . ..
T Consensus 86 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~v~~q~~~~~~~~~~~~~~~~~~~~~ 165 (526)
T 2pyx_A 86 ASFKQGSRFINWCKDPQSNVADSYLHPFSLPHGHQELDLCPYWLPHAEQVSFAEAVCSQQVLTQLGLAPKSIVTAQYHFQ 165 (526)
T ss_dssp CEEECEEEEESCSSCCBTTBCCEEEEESSCCTTTTTCCCHHHHGGGTTTSCHHHHHCSHHHHHHTTBCSSCTTSCTTCCS
T ss_pred CEEECCCcccCCCccccCCCCCceecCCCCCCCCCCCChhHHHHhhhhccCchhhcccccchhhhccchhhhhccccCCC
Confidence 211 000 01000 000 0 00
Q ss_pred cCc-ceecHHHHHHHHHHHHHH-CCCeEE-EEEEEEEEEcCCc-eEEEEecCceEEECceEEEccCCCCCCccccccCCC
Q 011835 183 RAY-GRVSRHLLHEELLRRCVE-SGVSYL-SSKVESITESTSG-HRLVACEHDMIVPCRLATVASGAASGKLLEYEVGGP 258 (476)
Q Consensus 183 ~~~-~~i~r~~l~~~L~~~~~~-~gv~i~-~~~v~~i~~~~~~-~~~v~~~~g~~i~a~~vV~A~G~~S~~~~~~~~~~~ 258 (476)
.++ ..++|..|.+.|.+.+++ .||+++ + +|+++..++++ .+.|.+.+|.+++||+||+|||.+|..+........
T Consensus 166 ~~~~~~~~r~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S~~~~~~lg~~~ 244 (526)
T 2pyx_A 166 NNYGYHLNAAKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKSLLLGEHLQVPF 244 (526)
T ss_dssp SCCEEEECHHHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGCCCCCCCTCCCE
T ss_pred CCeeEEEcHHHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcchHHHHHHhCCCc
Confidence 011 258999999999999998 899999 7 79999887554 457778887779999999999999965333221111
Q ss_pred ---c--ccceeEEEEEEEeeCCCCCCCceeeeccCCCCCCCccccCCCCCeEEEEEEcCCceEEEEeecccCCCCCChHH
Q 011835 259 ---K--VSVQTAYGVEVEVENNPYDPSLMVFMDYRDCTKQEVPSFESDNPTFLYVMPMSSTRVFFEETCLASKDGLPFDI 333 (476)
Q Consensus 259 ---~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 333 (476)
. ......+................... .....+|+|++|..++ ..++... .....+.+.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~g~~~~~pl~~~-~~~~~v~--~~~~~~~~~ 308 (526)
T 2pyx_A 245 LSQKSVLFNDRALAIQVPYSDANSPIASCTHS-------------TAQPNGWIWDIGLPTR-KGVGYVY--SSSHTNDID 308 (526)
T ss_dssp EECHHHHCCCEEEEEEEECSSTTCCCCSSEEE-------------EEETTEEEEEEECSSE-EEEEEEE--CTTTCCHHH
T ss_pred ccccccccCccEEEEEeeccCCCCCCCCceeE-------------EecCCCeEEEeeCCCc-eEEEEEe--cCCCCChHH
Confidence 0 01112222222222100000000000 0112478999999874 3333321 111223445
Q ss_pred HHHHHHHHHHHcCCcccceeEEEEEEeeCC--CCCCCCCCCeeEeccccCccCCcchHHHHHHHHhHHHHHHHHHHHhcc
Q 011835 334 LKKKLMARLERLGIQVLKTYEEEWSYIPVG--GSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAYILKH 411 (476)
Q Consensus 334 ~~~~l~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~~~rv~liGDAAh~~~P~~G~G~~~Al~da~~la~~l~~~l~~ 411 (476)
..+.+.+.+...+..+.. .+ ...+++. ...++..+|++++|||||.++|+.|+|+++|++||..||++|....
T Consensus 309 ~~~~l~~~l~~~~~~l~~-~~--~~~~~~~~~~~~~~~~grv~LiGDAAh~~~P~~GqGi~~ai~da~~La~~L~~~~-- 383 (526)
T 2pyx_A 309 AQKTLFNYLGVDGAAADK-LE--PRQLAINPGYRAKCWQNNCIAIGMAAGFIEPLEASALALIEWTASTLAQQLPPNR-- 383 (526)
T ss_dssp HHHHHHHHHTCCHHHHHH-CC--CEEEECCCEEESCSEETTEEECGGGTEECCCTTCHHHHHHHHHHHHHHHTCCSCH--
T ss_pred HHHHHHHHHHhcCccccc-CC--ceEEecccCccccccCCCEEEEEhhhcccCccccccHHHHHHHHHHHHHHhhhcC--
Confidence 555666555332211110 11 1122322 1234457999999999999999999999999999999998876311
Q ss_pred CCCcccccccCchhhHHHHHHHhcCc
Q 011835 412 DHSRGRLTHEQSNENISMQAWNTLWP 437 (476)
Q Consensus 412 ~~~~~~L~~~~~~~~~~~~~w~~~~~ 437 (476)
+.....|. .|++.++..+.
T Consensus 384 ~~~~~~l~-------~Y~~~~~~~~~ 402 (526)
T 2pyx_A 384 MVMDTISA-------RVNERYQQHWQ 402 (526)
T ss_dssp HHHHHHHH-------HHHHHHHHHHH
T ss_pred CcCHHHHH-------HHHHHHHHHHH
Confidence 11123344 77777765553
No 25
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.93 E-value=4.3e-24 Score=223.09 Aligned_cols=296 Identities=15% Similarity=0.100 Sum_probs=176.6
Q ss_pred CcccEEEECCCHHHHHHHHHHHH---cCCcEEEECCCCCCCCCcc--cc---hH-HHHhcCcchh--hhhh---------
Q 011835 106 GILDLVVIGCGPAGLALAAESAK---LGLNVGLIGPDLPFTNNYG--VW---ED-EFRDLGLEGC--IEHV--------- 165 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~---~G~~V~liE~~~~~~~~~G--~~---~~-~l~~~~~~~~--~~~~--------- 165 (476)
..+||+|||||++|+++|+.|++ .|++|+|||+........| ++ .. .++.+|+... +...
T Consensus 4 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~~~~~~g~~~~~~~~~~~l~~lG~~~~~~~~~~~~~~~~g~~ 83 (538)
T 2aqj_A 4 PIKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAAIPRIGVGEATIPSLQKVFFDFLGIPEREWMPQVNGAFKAAIK 83 (538)
T ss_dssp BCCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSSSCCCCSCEECCTHHHHHTHHHHTCCHHHHGGGGTCEEECEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCCCCCcCCCcccchhHHHHHHHHhCCCHHHHHHhcCchhhCCcc
Confidence 35799999999999999999999 9999999998643222212 21 22 4555565322 2211
Q ss_pred ---ccc-------ceeeeCCCC-----CEEe--------------c--------------------------cC-cceec
Q 011835 166 ---WRD-------TVVYIDEDE-----PILI--------------G--------------------------RA-YGRVS 189 (476)
Q Consensus 166 ---~~~-------~~~~~~~~~-----~~~~--------------~--------------------------~~-~~~i~ 189 (476)
|.. ...+...+. ...+ + .+ ...++
T Consensus 84 ~~~w~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~i~ 163 (538)
T 2aqj_A 84 FVNWRKSPDPSRDDHFYHLFGNVPNCDGVPLTHYWLRKREQGFQQPMEYACYPQPGALDGKLAPCLSDGTRQMSHAWHFD 163 (538)
T ss_dssp EESCSSSCCTTSCCEEEEESSCCCEETTEEHHHHHHHHHHTTCCSCHHHHHCSCHHHHHTTBCSBCTTCCBCSCCEEEEC
T ss_pred ccCcCcccccCCCCceECCCCccCccccCchhHHHHHhcccccccCccccccccccHhhhccchHhhcCCcCCCccEEEe
Confidence 110 000001110 0000 0 11 13689
Q ss_pred HHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCc-eEEEEecCceEEECceEEEccCCCCCCccccccCCCc--cc-cee
Q 011835 190 RHLLHEELLRRCVESGVSYL-SSKVESITESTSG-HRLVACEHDMIVPCRLATVASGAASGKLLEYEVGGPK--VS-VQT 264 (476)
Q Consensus 190 r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~-~~~v~~~~g~~i~a~~vV~A~G~~S~~~~~~~~~~~~--~~-~~~ 264 (476)
+..|...|.+.+.+.|++++ + +|+++..++++ .+.|.+.+|++++||+||+|||.+|..+......... .. ...
T Consensus 164 ~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s~~~~~~lg~~~~~~~~~~~~ 242 (538)
T 2aqj_A 164 AHLVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRGLLINQALKEPFIDMSDYLLC 242 (538)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGCCCCCCCTCCCEEECTTTCCC
T ss_pred HHHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCchhhHHHHhCCCcccccccccc
Confidence 99999999999999999999 7 89999886554 4678888888899999999999999654433211100 00 000
Q ss_pred EEEEEEEeeCCC----CCCCceeeeccCCCCCCCccccCCCCCeEEEEEEcCCceEEEEeecccCCCCCChHHHHHHHHH
Q 011835 265 AYGVEVEVENNP----YDPSLMVFMDYRDCTKQEVPSFESDNPTFLYVMPMSSTRVFFEETCLASKDGLPFDILKKKLMA 340 (476)
Q Consensus 265 ~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 340 (476)
...+.+.+.... ..+.... .....+|+|++|..++ ..++... .....+.+...+.+.+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~g~~~~~p~~~~-~~~g~v~--~~~~~~~~~~~~~l~~ 304 (538)
T 2aqj_A 243 DSAVASAVPNDDARDGVEPYTSS---------------IAMNSGWTWKIPMLGR-FGSGYVF--SSHFTSRDQATADFLK 304 (538)
T ss_dssp CEEEEEEEECCHHHHCCCSSEEE---------------EECSSEEEEEEEETTE-EEEEEEE--CTTTSCHHHHHHHHHH
T ss_pred ceEEEEecccCCcccCCCCceee---------------eecCCceEEEecCCCc-eEEEEEE--cCCCCChHHHHHHHHH
Confidence 112222222110 1111000 1123478999999874 4444432 1222344556666666
Q ss_pred HHHHcCCcccceeEEEEEEeeCC--CCCCCCCCCeeEeccccCccCCcchHHHHHHHHhHHHHHHHHHHHhccCCCcccc
Q 011835 341 RLERLGIQVLKTYEEEWSYIPVG--GSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAYILKHDHSRGRL 418 (476)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~~~rv~liGDAAh~~~P~~G~G~~~Al~da~~la~~l~~~l~~~~~~~~L 418 (476)
.+... .+ ... ..+++. ...++..+|++++|||||.++|+.|+|+++|++||..|+++|.. .......|
T Consensus 305 ~~~~~--~~---~~~--~~~~~~~~~~~~~~~grvvliGDAAh~~~P~~gqG~~~a~~da~~La~~L~~---~~~~~~~l 374 (538)
T 2aqj_A 305 LWGLS--DN---QPL--NQIKFRVGRNKRAWVNNCVSIGLSSCFLEPLESTGIYFIYAALYQLVKHFPD---TSFDPRLS 374 (538)
T ss_dssp HHTCC--TT---CCC--EEEECCCEEESCSEETTEEECGGGTEECCGGGSCHHHHHHHHHHHHHHTCCB---TTCCHHHH
T ss_pred HhcCC--CC---CCc--eEEeeccccccccccCCEEEEcccccccCcchhccHHHHHHHHHHHHHHhhc---cCCCHHHH
Confidence 65432 11 111 122321 12345579999999999999999999999999999998887652 12223344
Q ss_pred cccCchhhHHHHHHHhcCc
Q 011835 419 THEQSNENISMQAWNTLWP 437 (476)
Q Consensus 419 ~~~~~~~~~~~~~w~~~~~ 437 (476)
. .|++.++..+.
T Consensus 375 ~-------~Y~~~~~~~~~ 386 (538)
T 2aqj_A 375 D-------AFNAEIVHMFD 386 (538)
T ss_dssp H-------HHHHHHHHHHH
T ss_pred H-------HHHHHHHHHHH
Confidence 4 78777765543
No 26
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=99.93 E-value=6.5e-24 Score=220.50 Aligned_cols=215 Identities=13% Similarity=0.093 Sum_probs=133.8
Q ss_pred eecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCc-eEEEEecCceEEECceEEEccCCCCCCccccccCC-----Cc
Q 011835 187 RVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSG-HRLVACEHDMIVPCRLATVASGAASGKLLEYEVGG-----PK 259 (476)
Q Consensus 187 ~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~-~~~v~~~~g~~i~a~~vV~A~G~~S~~~~~~~~~~-----~~ 259 (476)
.++|..|...|.+.+.+.|++++ + +|+++..++++ .+.|.+.+|++++||+||+|||.+|..+....... ..
T Consensus 169 ~~~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~~~~~~~g~~~~~~~~~ 247 (511)
T 2weu_A 169 HFDADEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRGLLINQTLGGRFQSFSDV 247 (511)
T ss_dssp EECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGCCCCCCCTCCCEEECTTT
T ss_pred EEcHHHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcchHHHHHHhCCCCcccccc
Confidence 68999999999999999999999 7 99999986553 47788888888999999999999996544332111 11
Q ss_pred ccceeEEEEEEEeeCCC-CCCCceeeeccCCCCCCCccccCCCCCeEEEEEEcCCceEEEEeecccCCCCCChHHHHHHH
Q 011835 260 VSVQTAYGVEVEVENNP-YDPSLMVFMDYRDCTKQEVPSFESDNPTFLYVMPMSSTRVFFEETCLASKDGLPFDILKKKL 338 (476)
Q Consensus 260 ~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l 338 (476)
......+.......... ..+. ... .....+|+|++|..+ +..++.... ....+.++..+.+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~--~~~-------------~~~~~g~~~~~P~~~-~~~~g~~~~--~~~~~~~~~~~~l 309 (511)
T 2weu_A 248 LPNNRAVALRVPRENDEDMRPY--TTA-------------TAMSAGWMWTIPLFK-RDGNGYVYS--DEFISPEEAEREL 309 (511)
T ss_dssp CCCCEEEEEEEECSSGGGCCSS--EEE-------------EEETTEEEEEEECSS-EEEEEEEEC--TTTSCHHHHHHHH
T ss_pred CcccceEEEEeccCCCCCCCcc--eec-------------eecCCCcEEEEECCC-ceEEEEEEC--CCCCCHHHHHHHH
Confidence 11112222222221110 1110 000 112247899999987 455554321 2223445555666
Q ss_pred HHHHHHcCCcccceeEEEEEEeeCC-CC-CCCCCCCeeEeccccCccCCcchHHHHHHHHhHHHHHHHHHHHhccCCCcc
Q 011835 339 MARLERLGIQVLKTYEEEWSYIPVG-GS-LPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAYILKHDHSRG 416 (476)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~p~~-~~-~~~~~~rv~liGDAAh~~~P~~G~G~~~Al~da~~la~~l~~~l~~~~~~~ 416 (476)
.+.+.. .+.+. . ...+++. +. ..+..+|++++|||||.++|+.|+|+++|++||..||++|.. .+....
T Consensus 310 ~~~~~~-~~~~~---~--~~~~~~~~~~~~~~~~~rv~liGDAAh~~~P~~g~G~~~a~~da~~La~~l~~---~~~~~~ 380 (511)
T 2weu_A 310 RSTVAP-GRDDL---E--ANHIQMRIGRNERTWINNCVAVGLSAAFVEPLESTGIFFIQHAIEQLVKHFPG---ERWDPV 380 (511)
T ss_dssp HHHHCT-TCTTS---C--CEEEECCCEEESCSEETTEEECGGGTEECCGGGCCHHHHHHHHHHHHHHTCCC---TTCCHH
T ss_pred HHHhCc-ccccc---c--ceeEEeeccccccccCCCEEEEechhhccCccccccHHHHHHHHHHHHHHhcc---CCCCHH
Confidence 655521 11111 1 1112221 11 233469999999999999999999999999999999988763 222233
Q ss_pred cccccCchhhHHHHHHHhcC
Q 011835 417 RLTHEQSNENISMQAWNTLW 436 (476)
Q Consensus 417 ~L~~~~~~~~~~~~~w~~~~ 436 (476)
.|. .|++.++..+
T Consensus 381 ~l~-------~Y~~~~~~~~ 393 (511)
T 2weu_A 381 LIS-------AYNERMAHMV 393 (511)
T ss_dssp HHH-------HHHHHHHHHH
T ss_pred HHH-------HHHHHHHHHH
Confidence 444 7777775444
No 27
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.92 E-value=2.7e-23 Score=217.45 Aligned_cols=297 Identities=15% Similarity=0.122 Sum_probs=175.5
Q ss_pred CcccEEEECCCHHHHHHHHHHHH---cCCcEEEECCCCCCCCCcc--cc---hH-HHHhcCcchh--hhhh---------
Q 011835 106 GILDLVVIGCGPAGLALAAESAK---LGLNVGLIGPDLPFTNNYG--VW---ED-EFRDLGLEGC--IEHV--------- 165 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~---~G~~V~liE~~~~~~~~~G--~~---~~-~l~~~~~~~~--~~~~--------- 165 (476)
..+||||||||+||+++|+.|++ .|++|+|||+........| ++ .. .++.+|+... +...
T Consensus 24 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~~~~~~g~~~~p~~~~~~l~~lGi~~~~~~~~~~~~~~~g~~ 103 (550)
T 2e4g_A 24 KIDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPDIPTLGVGEATIPNLQTAFFDFLGIPEDEWMRECNASYKVAIK 103 (550)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCCCCCCCCCEECCTHHHHHTHHHHTCCHHHHHHHTTCEEECEEE
T ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCCCCccceeeeechhHHHHHHHHhCCChHHHHHhcCCeEEEeee
Confidence 45799999999999999999999 9999999998653222222 22 23 5566676432 2211
Q ss_pred ---cccc---------------eeeeCCC-----------------------C-C---E-----Ee--------------
Q 011835 166 ---WRDT---------------VVYIDED-----------------------E-P---I-----LI-------------- 181 (476)
Q Consensus 166 ---~~~~---------------~~~~~~~-----------------------~-~---~-----~~-------------- 181 (476)
|... ..+.+.+ . . . .+
T Consensus 104 ~~~w~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (550)
T 2e4g_A 104 FINWRTAGEGTSEARELDGGPDHFYHSFGLLKYHEQIPLSHYWFDRSYRGKTVEPFDYACYKEPVILDANRSPRRLDGSK 183 (550)
T ss_dssp EESSSSCCCCCSSCCEETTEESEEEEESSCCCEETTEEHHHHHHHHHHTTSCCCCHHHHHCSHHHHHHTTBCSBCTTSCB
T ss_pred EeecccccccccccccccCCCCeeEecCCccCCCCcccHHHHHHhhcccccccccccccccchhhHHHhhhhhHhhcCCC
Confidence 1110 0000000 0 0 0 00
Q ss_pred ccCc-ceecHHHHHHHHHHHHHHC-CCeEE-EEEEEEEEEcCCc-eEEEEecCceEEECceEEEccCCCCCCccccccCC
Q 011835 182 GRAY-GRVSRHLLHEELLRRCVES-GVSYL-SSKVESITESTSG-HRLVACEHDMIVPCRLATVASGAASGKLLEYEVGG 257 (476)
Q Consensus 182 ~~~~-~~i~r~~l~~~L~~~~~~~-gv~i~-~~~v~~i~~~~~~-~~~v~~~~g~~i~a~~vV~A~G~~S~~~~~~~~~~ 257 (476)
..++ ..+++..|.+.|.+.+++. ||+++ + +|+++..++++ .+.|.+.+|++++||+||+|||.+|..+.......
T Consensus 184 ~~~~~~~~~~~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S~~~~~~lg~~ 262 (550)
T 2e4g_A 184 VTNYAWHFDAHLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRGLLINKAMEEP 262 (550)
T ss_dssp CSCCEEEECHHHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGCCCCCCCTCCC
T ss_pred CCCcceEEcHHHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCchhhHHHHhCCC
Confidence 0111 2489999999999999888 99999 8 99999886553 46788888888999999999999996543332111
Q ss_pred C-----cccceeEEEEEEEeeCC--CCCCCceeeeccCCCCCCCccccCCCCCeEEEEEEcCCceEEEEeecccCCCCCC
Q 011835 258 P-----KVSVQTAYGVEVEVENN--PYDPSLMVFMDYRDCTKQEVPSFESDNPTFLYVMPMSSTRVFFEETCLASKDGLP 330 (476)
Q Consensus 258 ~-----~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 330 (476)
. ................. ...+... . .....+|+|++|..+ +..++... .....+
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--------------~~~~~g~~~~ipl~~-~~~~g~v~--~~~~~~ 324 (550)
T 2e4g_A 263 FLDMSDHLLNDSAVATQVPHDDDANGVEPFTS-A--------------IAMKSGWTWKIPMLG-RFGTGYVY--SSRFAT 324 (550)
T ss_dssp EEECTTTCCCCEEEEEEEECCHHHHCCCSSEE-E--------------EECSSEEEEEEECSS-EEEEEEEE--CTTTSC
T ss_pred cccccccccccceEEEeecccCCcccCCCcee-e--------------eecCCceEEEccCCC-ccceEEEE--ecCCCC
Confidence 0 00111122212211100 0011100 0 111347899999977 44444432 122234
Q ss_pred hHHHHHHHHHHHHHcCCcccceeEEEEEEeeCC--CCCCCCCCCeeEeccccCccCCcchHHHHHHHHhHHHHHHHHHHH
Q 011835 331 FDILKKKLMARLERLGIQVLKTYEEEWSYIPVG--GSLPNTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAYI 408 (476)
Q Consensus 331 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~~~rv~liGDAAh~~~P~~G~G~~~Al~da~~la~~l~~~ 408 (476)
.++..+.+.+.+... +.+.. .. .+++. .......+|++++|||||+++|+.|+|+++|+.||..|+++|..
T Consensus 325 ~~~~~~~l~~~~~~~-p~l~~---~~--~i~~~~~~~~~~~~~rvvliGDAAh~~~P~~GqGi~~a~~da~~La~~L~~- 397 (550)
T 2e4g_A 325 EDEAVREFCEMWHLD-PETQP---LN--RIRFRVGRNRRAWVGNCVSIGTSSCFVEPLESTGIYFVYAALYQLVKHFPD- 397 (550)
T ss_dssp HHHHHHHHHHHTTCC-TTTSC---CE--EEECCCEEESCSEETTEEECSTTTEECCGGGSCHHHHHHHHHHHHHHTCCC-
T ss_pred hHHHHHHHHHhhCcC-cccCC---Cc--eEEecCCCccccccCCEEEEehhhcccCccchhhHHHHHHHHHHHHHhccc-
Confidence 455556665554321 11111 11 11221 12234568999999999999999999999999999999887752
Q ss_pred hccCCCcccccccCchhhHHHHHHHhcCc
Q 011835 409 LKHDHSRGRLTHEQSNENISMQAWNTLWP 437 (476)
Q Consensus 409 l~~~~~~~~L~~~~~~~~~~~~~w~~~~~ 437 (476)
.......|. .|++.++..+.
T Consensus 398 --~~~~~~~l~-------~Y~~~~~~~~~ 417 (550)
T 2e4g_A 398 --KSLNPVLTA-------RFNREIETMFD 417 (550)
T ss_dssp --TTCCHHHHH-------HHHHHHHHHHH
T ss_pred --cCCCHHHHH-------HHHHHHHHHHH
Confidence 122233444 77777765443
No 28
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=99.88 E-value=2.1e-21 Score=197.07 Aligned_cols=274 Identities=14% Similarity=0.103 Sum_probs=146.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCC----cc---c---chHHHHhcCcch--hhhhhcccceeeeC
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNN----YG---V---WEDEFRDLGLEG--CIEHVWRDTVVYID 174 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~----~G---~---~~~~l~~~~~~~--~~~~~~~~~~~~~~ 174 (476)
.+||+||||||+||++|+.|++.|++|+|||+....... .+ . ....+..+++.. ..........+...
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~g~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~ 101 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRKPDEYSGLRLLNTVAHNAVTVQREVALDVNEWPSEEFGYFGHYYYVG 101 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCCGGGSTTSCCCCCCCBCHHHHHHHHHTTCCCSCHHHHCEEEEEEEEC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCChHhhcccccccchhccchhhhhhhhcChhhhhhhcccccceeEEEC
Confidence 369999999999999999999999999999987622111 01 1 122223444321 11122222333333
Q ss_pred CCCCEEe----ccCcceecHHHHHHHHHHHHHHCCCeEEEEEE--EEEEEcCCceEEEEecCceEEECceEEEccCCCCC
Q 011835 175 EDEPILI----GRAYGRVSRHLLHEELLRRCVESGVSYLSSKV--ESITESTSGHRLVACEHDMIVPCRLATVASGAASG 248 (476)
Q Consensus 175 ~~~~~~~----~~~~~~i~r~~l~~~L~~~~~~~gv~i~~~~v--~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S~ 248 (476)
......+ ..+...+++..+...|.+.+++.|++++...+ .+++ .....+|+||+|||.+|.
T Consensus 102 ~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~~~~~Gv~v~~~~v~~~~l~-------------~~~~~ad~VV~AdG~~S~ 168 (430)
T 3ihm_A 102 GPQPMRFYGDLKAPSRAVDYRLYQPMLMRALEARGGKFCYDAVSAEDLE-------------GLSEQYDLLVVCTGKYAL 168 (430)
T ss_dssp SSSCEEEEEEEEEEEBEECHHHHHHHHHHHHHHTTCEEEECCCCGGGHH-------------HHHTTSSEEEECCCCTTG
T ss_pred CCCccccchhcCCcceeecHHHHHHHHHHHHHHcCCEEEEEecchhhhh-------------hhcccCCEEEECCCCcch
Confidence 2222222 12223689999999999999999998873211 1110 011268999999999985
Q ss_pred Ccc-ccccC-CCc-cc-ceeEEEEEEEeeCCCCCCCceeeeccCCCCCCCccccCCCCCeEEEEEEc--CCceEEEEe--
Q 011835 249 KLL-EYEVG-GPK-VS-VQTAYGVEVEVENNPYDPSLMVFMDYRDCTKQEVPSFESDNPTFLYVMPM--SSTRVFFEE-- 320 (476)
Q Consensus 249 ~~~-~~~~~-~~~-~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--~~~~~~~~~-- 320 (476)
... ..... ... .+ .....+....+.. + ++....+.. ..+.+.+|++|. .++...+..
T Consensus 169 ~~~~~~~~~~~~~~~p~r~~~~~~~~g~~~-~-~~~~~~~~~-------------~~~~G~~~~~p~~~~~g~~~~~~~~ 233 (430)
T 3ihm_A 169 GKVFEKQSENSPFEKPQRALCVGLFKGIKE-A-PIRAVTMSF-------------SPGHGELIEIPTLSFNGMSTALVLE 233 (430)
T ss_dssp GGGSCBCGGGCCCSSCSSEEEEEEEESBCC-C-SSCCEEEEE-------------ETTTEEEEEEEEEETTEEEEEEEEE
T ss_pred HHhccCCCCCCcccCCCeeEEEEEEccCCC-C-CcCeeeeee-------------cCCCcceEEecccCCCcceEEEEEE
Confidence 321 11100 000 01 1111121111111 1 111111111 112355667774 233322211
Q ss_pred eccc-----CCCC---CChHHHHHHHHHHHHHcCCcccceeEE-------------EEEEeeCC--CCCCCCCCCeeE-e
Q 011835 321 TCLA-----SKDG---LPFDILKKKLMARLERLGIQVLKTYEE-------------EWSYIPVG--GSLPNTEQRNLA-F 376 (476)
Q Consensus 321 ~~~~-----~~~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~-------------~~~~~p~~--~~~~~~~~rv~l-i 376 (476)
.... +... .+.++..+.+.+.+..+.+.+...+.. ...++|.. ....+..+++++ +
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 313 (430)
T 3ihm_A 234 NHIGSDLEVLAHTKYDDDPRAFLDLMLEKLGKHHPSVAERIDPAEFDLANSSLDILQGGVVPAFRDGHATLNNGKTIIGL 313 (430)
T ss_dssp ECTTSSSGGGGTSCTTTCHHHHHHHHHHHHHHHCHHHHTTBCTTTCEESSSTTSEEEECCCCEEBCSEEECTTSCEEEEC
T ss_pred ecCCCcHHHhccccCCCCHHHHHHHHHHHHHHhCccHHHHHhhchhccccCccceeecceeecccccccccCCCCEEEEe
Confidence 1110 1111 245555556666665543322211110 01122321 112456788888 9
Q ss_pred ccccCccCCcchHHHHHHHHhHHHHHHHHHHH
Q 011835 377 GAAASMVHPATGYSVVRSLSEAPNYASAIAYI 408 (476)
Q Consensus 377 GDAAh~~~P~~G~G~~~Al~da~~la~~l~~~ 408 (476)
|||||.++|+.|||+|+||+||..|+++|...
T Consensus 314 GDAah~~~p~~g~G~~~a~~da~~l~~~l~~~ 345 (430)
T 3ihm_A 314 GDIQATVDPVLGQGANMASYAAWILGEEILAH 345 (430)
T ss_dssp GGGTEECCGGGCCHHHHHHHHHHHHHHHHHHC
T ss_pred cCccccCCCchhhhHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999975
No 29
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.78 E-value=5.5e-17 Score=161.75 Aligned_cols=202 Identities=10% Similarity=0.030 Sum_probs=120.4
Q ss_pred CcceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCCCCccccccCCCcccc
Q 011835 184 AYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGKLLEYEVGGPKVSV 262 (476)
Q Consensus 184 ~~~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S~~~~~~~~~~~~~~~ 262 (476)
..+.++...+...|.+.+++.|++++ +++|++++.+++++..|.+.+| +++||.||+|+|.+|..+..........+.
T Consensus 142 ~~~~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~v~gv~~~~g-~i~a~~VV~A~G~~s~~l~~~~g~~~~~~~ 220 (382)
T 1y56_B 142 TDGKADPFEATTAFAVKAKEYGAKLLEYTEVKGFLIENNEIKGVKTNKG-IIKTGIVVNATNAWANLINAMAGIKTKIPI 220 (382)
T ss_dssp TCCEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTE-EEECSEEEECCGGGHHHHHHHHTCCSCCCC
T ss_pred CCeeECHHHHHHHHHHHHHHCCCEEECCceEEEEEEECCEEEEEEECCc-EEECCEEEECcchhHHHHHHHcCCCcCcCC
Confidence 33467889999999999999999999 9999999988774555888777 799999999999998554432211100123
Q ss_pred eeEEEEEEEeeCCCCCCCceeeeccCCCCCCCccccCCCCCeEEEEEEcCCceEEEEe-eccc--CCCCCChHHHHHHHH
Q 011835 263 QTAYGVEVEVENNPYDPSLMVFMDYRDCTKQEVPSFESDNPTFLYVMPMSSTRVFFEE-TCLA--SKDGLPFDILKKKLM 339 (476)
Q Consensus 263 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~-~~~~--~~~~~~~~~~~~~l~ 339 (476)
....+..+.++..........+++. . ...+|+.|..++ +.+|. +... ..+........+.+.
T Consensus 221 ~~~~g~~~~~~~~~~~~~~~~~~~~-------------~-~~~~y~~p~~~g-~~iG~~~~~~~~~~~~~~~~~~~~~l~ 285 (382)
T 1y56_B 221 EPYKHQAVITQPIKRGTINPMVISF-------------K-YGHAYLTQTFHG-GIIGGIGYEIGPTYDLTPTYEFLREVS 285 (382)
T ss_dssp EEEEEEEEEECCCSTTSSCSEEEES-------------T-TTTEEEECCSSS-CCEEECSCCBSSCCCCCCCHHHHHHHH
T ss_pred CeeEeEEEEEccCCcccCCCeEEec-------------C-CCeEEEEEeCCe-EEEecCCCCCCCCCCCCCCHHHHHHHH
Confidence 3344544444322111110111111 0 023778888887 77774 2111 112222333344444
Q ss_pred HHHHHcCCccc--ceeEEEEEEeeCCCCCCCCCCCeeEecccc-----CccCCcchHHHHHHHHhHHHHHHHHHH
Q 011835 340 ARLERLGIQVL--KTYEEEWSYIPVGGSLPNTEQRNLAFGAAA-----SMVHPATGYSVVRSLSEAPNYASAIAY 407 (476)
Q Consensus 340 ~~~~~~~~~~~--~~~~~~~~~~p~~~~~~~~~~rv~liGDAA-----h~~~P~~G~G~~~Al~da~~la~~l~~ 407 (476)
+.+.++-+.+. ++.....+.+|.. .++.++||... .....+.|.|+..|...|..+|+.|..
T Consensus 286 ~~~~~~~p~l~~~~~~~~~~g~r~~t------~d~~p~ig~~~~~~~~~~~~G~~g~G~~~a~~~g~~la~~i~~ 354 (382)
T 1y56_B 286 YYFTKIIPALKNLLILRTWAGYYAKT------PDSNPAIGRIEELNDYYIAAGFSGHGFMMAPAVGEMVAELITK 354 (382)
T ss_dssp HHHHHHCGGGGGSEEEEEEEEEEEEC------TTSCCEEEEESSSBTEEEEECCTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCcCCCCceEEEEeccccC------CCCCcEeccCCCCCCEEEEEecCcchHhhhHHHHHHHHHHHhC
Confidence 54444434332 3333344455543 45667777653 233557788998888888888887764
No 30
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.78 E-value=1.3e-17 Score=166.18 Aligned_cols=193 Identities=13% Similarity=0.061 Sum_probs=121.9
Q ss_pred ceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCCCCccccccCCCccccee
Q 011835 186 GRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGKLLEYEVGGPKVSVQT 264 (476)
Q Consensus 186 ~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S~~~~~~~~~~~~~~~~~ 264 (476)
+.+++..+...|.+.+.+.|++++ +++|+++..+++ .+.|.+.+| +++||.||+|+|.++..+..... .......
T Consensus 159 ~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~-~~~v~~~~g-~~~a~~vV~A~G~~s~~l~~~~~--~~~~~~~ 234 (382)
T 1ryi_A 159 VHVEPYFVCKAYVKAAKMLGAEIFEHTPVLHVERDGE-ALFIKTPSG-DVWANHVVVASGVWSGMFFKQLG--LNNAFLP 234 (382)
T ss_dssp CBCCHHHHHHHHHHHHHHTTCEEETTCCCCEEECSSS-SEEEEETTE-EEEEEEEEECCGGGTHHHHHHTT--CCCCCEE
T ss_pred eEEcHHHHHHHHHHHHHHCCCEEEcCCcEEEEEEECC-EEEEEcCCc-eEEcCEEEECCChhHHHHHHhcC--CCCceec
Confidence 467888999999999999999999 999999998776 357777777 79999999999999864433221 1112334
Q ss_pred EEEEEEEeeCCCCCCCceeeeccCCCCCCCccccCCCCCeEEEEEEcCCceEEEEeecccC-CCCCChHHHHHHHHHHHH
Q 011835 265 AYGVEVEVENNPYDPSLMVFMDYRDCTKQEVPSFESDNPTFLYVMPMSSTRVFFEETCLAS-KDGLPFDILKKKLMARLE 343 (476)
Q Consensus 265 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~ 343 (476)
..+..+.++..........+ . .+.|++|..++++.+|.+.... ......++..+.+.+.+.
T Consensus 235 ~~g~~~~~~~~~~~~~~~~~--------------~----~~~~~~p~~~g~~~vG~~~~~~~~~~~~~~~~~~~l~~~~~ 296 (382)
T 1ryi_A 235 VKGECLSVWNDDIPLTKTLY--------------H----DHCYIVPRKSGRLVVGATMKPGDWSETPDLGGLESVMKKAK 296 (382)
T ss_dssp EEEEEEEEECCSSCCCSEEE--------------E----TTEEEEECTTSEEEEECCCEETCCCCSCCHHHHHHHHHHHH
T ss_pred cceEEEEECCCCCCccceEE--------------c----CCEEEEEcCCCeEEEeecccccCCCCCCCHHHHHHHHHHHH
Confidence 45555555432211111111 0 1378899988888888653221 112223333445555555
Q ss_pred HcCCccc--ceeEEEEEEeeCCCCCCCCCCCeeEecccc-----CccCCcchHHHHHHHHhHHHHHHHHH
Q 011835 344 RLGIQVL--KTYEEEWSYIPVGGSLPNTEQRNLAFGAAA-----SMVHPATGYSVVRSLSEAPNYASAIA 406 (476)
Q Consensus 344 ~~~~~~~--~~~~~~~~~~p~~~~~~~~~~rv~liGDAA-----h~~~P~~G~G~~~Al~da~~la~~l~ 406 (476)
++-+.+. ++.....+..|+ +.++.+++|+.. ....++.|.|+..|...|..+|+.|.
T Consensus 297 ~~~p~l~~~~~~~~w~g~~~~------t~d~~p~ig~~~~~~~l~~~~G~~g~G~~~a~~~g~~la~~i~ 360 (382)
T 1ryi_A 297 TMLPAIQNMKVDRFWAGLRPG------TKDGKPYIGRHPEDSRILFAAGHFRNGILLAPATGALISDLIM 360 (382)
T ss_dssp HHCGGGGGSEEEEEEEEEEEE------CSSSCCEEEEETTEEEEEEEECCSSCTTTTHHHHHHHHHHHHT
T ss_pred HhCCCcCCCceeeEEEEeccc------CCCCCcEeccCCCcCCEEEEEcCCcchHHHhHHHHHHHHHHHh
Confidence 4433332 233333344454 356678888763 34577889998888888777777765
No 31
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.77 E-value=4.7e-18 Score=175.23 Aligned_cols=129 Identities=21% Similarity=0.270 Sum_probs=93.0
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCC--cccch---HHHHhcCcchhhhhhcccceeeeCCCCCEE
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNN--YGVWE---DEFRDLGLEGCIEHVWRDTVVYIDEDEPIL 180 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~--~G~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (476)
..+||+||||||+||++|+.|++.|++|+|||+....... .+++. ..+..+++....... .
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~--------~------ 156 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRF--------C------ 156 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTT--------T------
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCCCcccCChhHHHHHHHcCCccccccc--------c------
Confidence 4589999999999999999999999999999997654422 22222 233344432211100 0
Q ss_pred eccCcceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcC--CceEEEEe--c-Cc--eEEECceEEEccCCCCCC
Q 011835 181 IGRAYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITEST--SGHRLVAC--E-HD--MIVPCRLATVASGAASGK 249 (476)
Q Consensus 181 ~~~~~~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~--~~~~~v~~--~-~g--~~i~a~~vV~A~G~~S~~ 249 (476)
......+++..+.+.|.+.+++.|++++ +++|+++..++ +..+.|.+ . +| .++++|+||+|||++|..
T Consensus 157 -~~~~~~~~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~~ 232 (497)
T 2bry_A 157 -TGTLDHISIRQLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFVP 232 (497)
T ss_dssp -CTTCCEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCCC
T ss_pred -ccccccCCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCccc
Confidence 0112247888999999999998999999 99999998742 22466666 3 55 578999999999999954
No 32
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.76 E-value=1.2e-16 Score=160.56 Aligned_cols=197 Identities=12% Similarity=-0.009 Sum_probs=113.8
Q ss_pred cceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCCCCccccccCCCcccce
Q 011835 185 YGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGKLLEYEVGGPKVSVQ 263 (476)
Q Consensus 185 ~~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S~~~~~~~~~~~~~~~~ 263 (476)
.+.++...+...|.+.+++.|++++ +++|+++..++++++.|.+.+| +++||.||+|+|.+|..+....... ....
T Consensus 168 ~~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s~~l~~~~g~~--~~~~ 244 (405)
T 2gag_B 168 AGIAKHDHVAWAFARKANEMGVDIIQNCEVTGFIKDGEKVTGVKTTRG-TIHAGKVALAGAGHSSVLAEMAGFE--LPIQ 244 (405)
T ss_dssp CBBCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTC-CEEEEEEEECCGGGHHHHHHHHTCC--CCEE
T ss_pred CccCCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEeCCEEEEEEeCCc-eEECCEEEECCchhHHHHHHHcCCC--CCcc
Confidence 3467788899999999999999999 9999999988765677888877 6999999999999885443322111 1222
Q ss_pred eEEEEEEEeeCCCCCCCceeeeccCCCCCCCccccCCCCCeEEEEEEcCCceEEEEeeccc--CCCCCChHHHHHHHHHH
Q 011835 264 TAYGVEVEVENNPYDPSLMVFMDYRDCTKQEVPSFESDNPTFLYVMPMSSTRVFFEETCLA--SKDGLPFDILKKKLMAR 341 (476)
Q Consensus 264 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~ 341 (476)
...+....++....... ..+.+ . ...+|+.|..++++.++.+... ........+..+.+.+.
T Consensus 245 ~~~~~~~~~~~~~~~~~-~~~~~-------------~--~~~~y~~p~~~g~~~ig~~~~~~~~~~~~~~~~~~~~l~~~ 308 (405)
T 2gag_B 245 SHPLQALVSELFEPVHP-TVVMS-------------N--HIHVYVSQAHKGELVMGAGIDSYNGYGQRGAFHVIQEQMAA 308 (405)
T ss_dssp EEEEEEEEEEEBCSCCC-SEEEE-------------T--TTTEEEEECTTSEEEEEEEECSSCCCSSCCCTHHHHHHHHH
T ss_pred ccceeEEEecCCccccC-ceEEe-------------C--CCcEEEEEcCCCcEEEEeccCCCCccccCCCHHHHHHHHHH
Confidence 23333332221110001 11111 0 1237888988888888765321 11111223334444555
Q ss_pred HHHcCCccc--ceeEEEEEEeeCCCCCCCCCCCeeEecccc----CccCCcchHHHHHHHHhHHHHHHHHH
Q 011835 342 LERLGIQVL--KTYEEEWSYIPVGGSLPNTEQRNLAFGAAA----SMVHPATGYSVVRSLSEAPNYASAIA 406 (476)
Q Consensus 342 ~~~~~~~~~--~~~~~~~~~~p~~~~~~~~~~rv~liGDAA----h~~~P~~G~G~~~Al~da~~la~~l~ 406 (476)
+..+-+.+. ++.....+.+|+ +.++.+++|+.. .....+.|.|+..|...|..+|+.|.
T Consensus 309 ~~~~~p~l~~~~~~~~w~g~~~~------t~d~~p~ig~~~~~~l~~~~G~~g~G~~~a~~~g~~la~~i~ 373 (405)
T 2gag_B 309 AVELFPIFARAHVLRTWGGIVDT------TMDASPIISKTPIQNLYVNCGWGTGGFKGTPGAGFTLAHTIA 373 (405)
T ss_dssp HHHHCGGGGGCEECEEEEEEEEE------ETTSCCEEEECSSBTEEEEECCGGGCSTTHHHHHHHHHHHHH
T ss_pred HHHhCCccccCCcceEEeecccc------CCCCCCEecccCCCCEEEEecCCCchhhHHHHHHHHHHHHHh
Confidence 544434332 333333344444 457788899864 12233455665555555555555544
No 33
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.74 E-value=1.3e-16 Score=155.95 Aligned_cols=281 Identities=14% Similarity=0.143 Sum_probs=145.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCc------------cc---------chHHHHhcCcchhhhhhc
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNY------------GV---------WEDEFRDLGLEGCIEHVW 166 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~------------G~---------~~~~l~~~~~~~~~~~~~ 166 (476)
+||+|||||++|+++|+.|++.|++|+|||+........ |. +...+..+.... ....|
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 81 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQAQG-HVAEW 81 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHHHHT-SEEEE
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHHHhCC-Ceeec
Confidence 699999999999999999999999999999976432110 00 001111100000 00111
Q ss_pred ccceeeeCCCCCEEec-cCcceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCceEE-ECceEEEcc
Q 011835 167 RDTVVYIDEDEPILIG-RAYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIV-PCRLATVAS 243 (476)
Q Consensus 167 ~~~~~~~~~~~~~~~~-~~~~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i-~a~~vV~A~ 243 (476)
................ .......+..+. .|.+.+.+ |++++ +++|++++.+++ .+.|.+.+|+.+ .+|+||+|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~l~~-g~~i~~~~~v~~i~~~~~-~~~v~~~~g~~~~~a~~vV~a~ 158 (336)
T 1yvv_A 82 TPLLYNFHAGRLSPSPDEQVRWVGKPGMS-AITRAMRG-DMPVSFSCRITEVFRGEE-HWNLLDAEGQNHGPFSHVIIAT 158 (336)
T ss_dssp CCCEEEESSSBCCCCCTTSCEEEESSCTH-HHHHHHHT-TCCEECSCCEEEEEECSS-CEEEEETTSCEEEEESEEEECS
T ss_pred cccceeccCcccccCCCCCccEEcCccHH-HHHHHHHc-cCcEEecCEEEEEEEeCC-EEEEEeCCCcCccccCEEEEcC
Confidence 1111111111000000 000011111111 12333332 89999 999999998877 577888888766 499999999
Q ss_pred CCCCCCccccccC-----CCcccceeEEEEEEEeeCCCCCCCceeeeccCCCCCCCccccCCCCCeEEEEE-----EcCC
Q 011835 244 GAASGKLLEYEVG-----GPKVSVQTAYGVEVEVENNPYDPSLMVFMDYRDCTKQEVPSFESDNPTFLYVM-----PMSS 313 (476)
Q Consensus 244 G~~S~~~~~~~~~-----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----p~~~ 313 (476)
|.++........+ .....+...+.+.+.++.. .......+. ...++ ..|++ |..+
T Consensus 159 g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-------------~~~~~-~~~l~~~~~~p~~~ 223 (336)
T 1yvv_A 159 PAPQASTLLAAAPKLASVVAGVKMDPTWAVALAFETP-LQTPMQGCF-------------VQDSP-LDWLARNRSKPERD 223 (336)
T ss_dssp CHHHHGGGGTTCHHHHHHHTTCCEEEEEEEEEEESSC-CSCCCCEEE-------------ECSSS-EEEEEEGGGSTTCC
T ss_pred CHHHHHHhhccCHHHHHHHhhcCccceeEEEEEecCC-CCCCCCeEE-------------eCCCc-eeEEEecCcCCCCC
Confidence 9887432210000 0112344444444444432 111111111 01111 22332 3222
Q ss_pred ce---EEEEeecc--cCCCCCChHHHHHHHHHHHHHc-CCccc--ceeE-EEEE-EeeCCCCCC----CCCCCeeEeccc
Q 011835 314 TR---VFFEETCL--ASKDGLPFDILKKKLMARLERL-GIQVL--KTYE-EEWS-YIPVGGSLP----NTEQRNLAFGAA 379 (476)
Q Consensus 314 ~~---~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~-~~~~~--~~~~-~~~~-~~p~~~~~~----~~~~rv~liGDA 379 (476)
+. +.+..... ......+.+++.+.+.+.+..+ +.... .... ..|. .+|...... ...+|++|+||+
T Consensus 224 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~~~~~p~~~~~~rw~~a~~~~~~~~~~~~~~~~rl~laGDa 303 (336)
T 1yvv_A 224 DTLDTWILHATSQWSRQNLDASREQVIEHLHGAFAELIDCTMPAPVFSLAHRWLYARPAGAHEWGALSDADLGIYVCGDW 303 (336)
T ss_dssp CSSEEEEEEECHHHHHHTTTSCHHHHHHHHHHHHHTTCSSCCCCCSEEEEEEEEEEEESSCCCCSCEEETTTTEEECCGG
T ss_pred CCCcEEEEEeCHHHHHHHHhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEccccCccCCCCCCCCCeeecCCCCEEEEecC
Confidence 21 22221100 1123456777778887777654 32221 1111 1222 234432222 134899999999
Q ss_pred cCccCCcchHHHHHHHHhHHHHHHHHHHHhccCC
Q 011835 380 ASMVHPATGYSVVRSLSEAPNYASAIAYILKHDH 413 (476)
Q Consensus 380 Ah~~~P~~G~G~~~Al~da~~la~~l~~~l~~~~ 413 (476)
+|. .|++.|+.+|..+|+.|.+.+...+
T Consensus 304 ~~g------~gv~~a~~sg~~lA~~l~~~~~~~~ 331 (336)
T 1yvv_A 304 CLS------GRVEGAWLSGQEAARRLLEHLQLEH 331 (336)
T ss_dssp GTT------SSHHHHHHHHHHHHHHHHHHTTC--
T ss_pred CCC------CCHHHHHHHHHHHHHHHHHHhhhhh
Confidence 953 4999999999999999999887654
No 34
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.73 E-value=3.3e-16 Score=154.99 Aligned_cols=208 Identities=13% Similarity=0.003 Sum_probs=117.6
Q ss_pred cceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCc--eEEECceEEEccCCCCCCccccc-cCCC--
Q 011835 185 YGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHD--MIVPCRLATVASGAASGKLLEYE-VGGP-- 258 (476)
Q Consensus 185 ~~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g--~~i~a~~vV~A~G~~S~~~~~~~-~~~~-- 258 (476)
.+.++...+...|.+.+++.|++++ +++|+++..++++.+.|.+.+| .+++||.||+|+|.+|..+.... ....
T Consensus 144 ~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~a~~VV~A~G~~s~~l~~~~~g~~~~~ 223 (369)
T 3dme_A 144 TGIVDSHALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGFELDFGGAEPMTLSCRVLINAAGLHAPGLARRIEGIPRDS 223 (369)
T ss_dssp CEEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSSEEEEECTTSCEEEEEEEEEECCGGGHHHHHHTEETSCGGG
T ss_pred CEEECHHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCceEEEEECCCceeEEEeCEEEECCCcchHHHHHHhcCCCccc
Confidence 3467888999999999999999999 9999999998775577888887 58999999999999996544322 1110
Q ss_pred cccceeEEEEEEEeeCCCCCCCceeeeccCCCCCCCccccCCCCCeEEEEEEcCCceEEEEeeccc--CCCCCChHHHHH
Q 011835 259 KVSVQTAYGVEVEVENNPYDPSLMVFMDYRDCTKQEVPSFESDNPTFLYVMPMSSTRVFFEETCLA--SKDGLPFDILKK 336 (476)
Q Consensus 259 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~ 336 (476)
........|..+.++.. .......+... ...+.+ .++.+..++.+.+|.+... ..+..+..+..+
T Consensus 224 ~~~i~p~rG~~~~~~~~-~~~~~~~~~~p-----------~~~~~~-~~~~~~~~g~~~iG~t~e~~~~~~~~~~~~~~~ 290 (369)
T 3dme_A 224 IPPEYLCKGSYFTLAGR-APFSRLIYPVP-----------QHAGLG-VHLTLDLGGQAKFGPDTEWIATEDYTLDPRRAD 290 (369)
T ss_dssp SCCCEEEEEEEEECSSS-CSCSSEEEECT-----------TCSSCC-CCEEECTTSCEEECCCCEEESSCCCCCCGGGGG
T ss_pred cceeeecceEEEEECCC-CccCceeecCC-----------CCCCce-EEEeCccCCcEEECCCcccccccccccCHHHHH
Confidence 11344556666655532 11111111100 111112 2334445566777654321 112112222233
Q ss_pred HHHHHHHHcCCcc--cceeEEEEEEeeCCCCCCCCCCCeeEe-ccc------cCccCCcchHHHHHHHHhHHHHHHHHH
Q 011835 337 KLMARLERLGIQV--LKTYEEEWSYIPVGGSLPNTEQRNLAF-GAA------ASMVHPATGYSVVRSLSEAPNYASAIA 406 (476)
Q Consensus 337 ~l~~~~~~~~~~~--~~~~~~~~~~~p~~~~~~~~~~rv~li-GDA------Ah~~~P~~G~G~~~Al~da~~la~~l~ 406 (476)
.+.+.+.++-+.+ .++.....+..|.... +...++.++| |.. .....-+.+.|+.+|...|..+++.|.
T Consensus 291 ~l~~~~~~~~P~l~~~~v~~~w~G~Rp~~~~-~~~~d~~p~i~g~~~~~~~~l~~~~G~~~~G~t~ap~~a~~~a~~i~ 368 (369)
T 3dme_A 291 VFYAAVRSYWPALPDGALAPGYTGIRPKISG-PHEPAADFAIAGPASHGVAGLVNLYGIESPGLTASLAIAEETLARLA 368 (369)
T ss_dssp GHHHHHHTTCTTCCTTCCEEEEEEEEEESSC-TTSCCCCCEEECHHHHCCTTEEEEECCCTTHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHCCCCChhhceecceeccccccC-CCCCcCCeEEecccccCCCCEEEEeCCCCchHhccHHHHHHHHHHhh
Confidence 4444444443333 2455555667776421 1122333444 642 112233556688888888887777663
No 35
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.72 E-value=4e-16 Score=155.76 Aligned_cols=199 Identities=14% Similarity=0.025 Sum_probs=114.2
Q ss_pred cceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCCCCccccccCCCcccce
Q 011835 185 YGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGKLLEYEVGGPKVSVQ 263 (476)
Q Consensus 185 ~~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S~~~~~~~~~~~~~~~~ 263 (476)
.+.++...+...|.+.+++.|++++ +++|++++.+++ .+.|.+.+| +++||.||+|+|.++..+..... ......
T Consensus 144 ~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~-~~~v~~~~g-~~~a~~vV~A~G~~~~~l~~~~g--~~~pl~ 219 (389)
T 2gf3_A 144 SGVLFSENCIRAYRELAEARGAKVLTHTRVEDFDISPD-SVKIETANG-SYTADKLIVSMGAWNSKLLSKLN--LDIPLQ 219 (389)
T ss_dssp CEEEEHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSS-CEEEEETTE-EEEEEEEEECCGGGHHHHGGGGT--EECCCE
T ss_pred CcEEeHHHHHHHHHHHHHHCCCEEEcCcEEEEEEecCC-eEEEEeCCC-EEEeCEEEEecCccHHHHhhhhc--cCCceE
Confidence 3467888999999999999999999 999999998776 466777666 69999999999998865433221 011233
Q ss_pred eEEEEEEEeeCCC--CC--CCceeeeccCCCCCCCccccCCCCCeEEEEEEcCCc-eEEEEeecc----cC--CCCCC--
Q 011835 264 TAYGVEVEVENNP--YD--PSLMVFMDYRDCTKQEVPSFESDNPTFLYVMPMSST-RVFFEETCL----AS--KDGLP-- 330 (476)
Q Consensus 264 ~~~g~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~----~~--~~~~~-- 330 (476)
...+..+.++... .. .....+.. .....++|++|..++ .+.+|.+.. .. .+...
T Consensus 220 ~~rg~~~~~~~~~~~~~~~~~~p~~~~-------------~~~~~~~y~~p~~~g~~~~iG~~~~~~~~~~~~~~~~~~~ 286 (389)
T 2gf3_A 220 PYRQVVGFFESDESKYSNDIDFPGFMV-------------EVPNGIYYGFPSFGGCGLKLGYHTFGQKIDPDTINREFGV 286 (389)
T ss_dssp EEEEEEEEECCCHHHHBGGGTCCEEEE-------------EETTEEEEEECBSTTCCEEEEESSCCEECCTTTCCCCTTS
T ss_pred EEEEEEEEEecCcccccccccCCEEEE-------------eCCCCcEEEcCCCCCCcEEEEEcCCCCccCcccccCccCC
Confidence 4455555544221 00 00011110 011236889999887 788875421 11 11111
Q ss_pred hHHHHHHHHHHHHHcCCccc-ceeEEEEEEeeCCCCCCCCCCCeeEecccc-----CccCCcchHHHHHHHHhHHHHHHH
Q 011835 331 FDILKKKLMARLERLGIQVL-KTYEEEWSYIPVGGSLPNTEQRNLAFGAAA-----SMVHPATGYSVVRSLSEAPNYASA 404 (476)
Q Consensus 331 ~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~p~~~~~~~~~~rv~liGDAA-----h~~~P~~G~G~~~Al~da~~la~~ 404 (476)
.....+.+.+.+.++-+.+. .+.....+.+|. +.++.++||... +...-+.|.|+..|...|..+|+.
T Consensus 287 ~~~~~~~l~~~~~~~~P~l~~~~~~~w~g~r~~------t~D~~p~ig~~~~~~~l~~a~G~~g~G~~~ap~~g~~la~~ 360 (389)
T 2gf3_A 287 YPEDESNLRAFLEEYMPGANGELKRGAVCMYTK------TLDEHFIIDLHPEHSNVVIAAGFSGHGFKFSSGVGEVLSQL 360 (389)
T ss_dssp SHHHHHHHHHHHHHHCGGGCSCEEEEEEEEEEE------CTTSCCEEEEETTEEEEEEEECCTTCCGGGHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCCCCceEEEEEEecc------CCCCCeEEccCCCCCCEEEEECCccccccccHHHHHHHHHH
Confidence 22223555555555444333 333333444554 356677788642 223344566766655555555555
Q ss_pred HH
Q 011835 405 IA 406 (476)
Q Consensus 405 l~ 406 (476)
|.
T Consensus 361 i~ 362 (389)
T 2gf3_A 361 AL 362 (389)
T ss_dssp HH
T ss_pred Hc
Confidence 44
No 36
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.72 E-value=5.6e-16 Score=154.13 Aligned_cols=196 Identities=16% Similarity=0.113 Sum_probs=114.5
Q ss_pred cceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCCCCccccccCCCcccce
Q 011835 185 YGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGKLLEYEVGGPKVSVQ 263 (476)
Q Consensus 185 ~~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S~~~~~~~~~~~~~~~~ 263 (476)
.+.++...+...|.+.+++.|++++ +++|+++..+++ .+.|.+.+| +++||.||+|+|.+|..+....... .....
T Consensus 148 ~~~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~-~~~V~t~~g-~i~a~~VV~A~G~~s~~l~~~~g~~-~~~~~ 224 (381)
T 3nyc_A 148 GADIDTDALHQGYLRGIRRNQGQVLCNHEALEIRRVDG-AWEVRCDAG-SYRAAVLVNAAGAWCDAIAGLAGVR-PLGLQ 224 (381)
T ss_dssp CEEECHHHHHHHHHHHHHHTTCEEESSCCCCEEEEETT-EEEEECSSE-EEEESEEEECCGGGHHHHHHHHTCC-CCCCE
T ss_pred CceECHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEeCC-eEEEEeCCC-EEEcCEEEECCChhHHHHHHHhCCC-CCcee
Confidence 3568889999999999999999999 999999998877 578888877 7999999999999996554332211 11334
Q ss_pred eEEEEEEEeeCCC-CCCCc-eeeeccCCCCCCCccccCCCCCeEEEEEEcCCceEEEEeecccC---CCCCChHHHHHHH
Q 011835 264 TAYGVEVEVENNP-YDPSL-MVFMDYRDCTKQEVPSFESDNPTFLYVMPMSSTRVFFEETCLAS---KDGLPFDILKKKL 338 (476)
Q Consensus 264 ~~~g~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~l 338 (476)
...+..+.++.+. ..... ..+.+. . ..+|+.|.. +++.++.+.... .+..+.+...+.+
T Consensus 225 p~rg~~~~~~~~~~~~~~~~p~~~~~-------------~--~~~y~~p~~-g~~~ig~~~~~~~~~~~~~~~~~~~~~~ 288 (381)
T 3nyc_A 225 PKRRSAFIFAPPPGIDCHDWPMLVSL-------------D--ESFYLKPDA-GMLLGSPANADPVEAHDVQPEQLDIATG 288 (381)
T ss_dssp EEEEEEEEECCCTTCCCTTCCEEEET-------------T--SSCEEEEET-TEEEEECCCCEECCSSCCCCCHHHHHHH
T ss_pred eeEEEEEEECCCcCCCcCccceEEeC-------------C--CCEEEEeCC-CcEEEeCCcCCCCCcccCCCChHHHHHH
Confidence 4555555554322 11111 111111 1 125778887 777787553221 1112222222334
Q ss_pred HHHHHHc-CCcccceeEEEEEEeeCCCCCCCCCCCeeEecccc-----CccCCcchHHHHHHHHhHHHHHHHH
Q 011835 339 MARLERL-GIQVLKTYEEEWSYIPVGGSLPNTEQRNLAFGAAA-----SMVHPATGYSVVRSLSEAPNYASAI 405 (476)
Q Consensus 339 ~~~~~~~-~~~~~~~~~~~~~~~p~~~~~~~~~~rv~liGDAA-----h~~~P~~G~G~~~Al~da~~la~~l 405 (476)
.+.+..+ .....++.....+.+|+. .++.++||... .....+.|.|+.+|...|..+|+.|
T Consensus 289 ~~~~~~~~~l~~~~~~~~w~G~r~~t------~D~~p~ig~~~~~~~l~~a~G~~g~G~~~ap~~g~~la~~i 355 (381)
T 3nyc_A 289 MYLIEEATTLTIRRPEHTWAGLRSFV------ADGDLVAGYAANAEGFFWVAAQGGYGIQTSAAMGEASAALI 355 (381)
T ss_dssp HHHHHHHBSCCCCCCSEEEEEEEEEC------TTSCCEEEECTTSTTEEEEECCTTCTTTTHHHHHHHHHHHH
T ss_pred HHHHHhcCCCcccceeeeeEEccccC------CCCCceecCCCCCCCeEEEEcCCChhHhhCHHHHHHHHHHH
Confidence 4444443 122223444445555553 45667777542 2223455677666665555555554
No 37
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.71 E-value=9.3e-16 Score=164.26 Aligned_cols=193 Identities=12% Similarity=0.088 Sum_probs=116.3
Q ss_pred cceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCCCCccccccCCCcccce
Q 011835 185 YGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGKLLEYEVGGPKVSVQ 263 (476)
Q Consensus 185 ~~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S~~~~~~~~~~~~~~~~ 263 (476)
.+.++...+...|.+.+++.|++++ +++|+++..+++ .+.|.+.+|.+++||.||+|+|.+|..+..... ....
T Consensus 411 ~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~-~v~V~t~~G~~i~Ad~VVlAtG~~s~~l~~~~~----lpl~ 485 (676)
T 3ps9_A 411 GGWLCPAELTRNVLELAQQQGLQIYYQYQLQNFSRKDD-CWLLNFAGDQQATHSVVVLANGHQISRFSQTST----LPVY 485 (676)
T ss_dssp CEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEEETT-EEEEEETTSCEEEESEEEECCGGGGGCSTTTTT----CSCE
T ss_pred CeeeCHHHHHHHHHHHHHhCCCEEEeCCeeeEEEEeCC-eEEEEECCCCEEECCEEEECCCcchhccccccC----Ccce
Confidence 3467889999999999999999999 999999999887 578888887789999999999999876554321 1344
Q ss_pred eEEEEEEEeeCCCCCCCceeeeccCCCCCCCccccCCCCCeEEEEEEcC--CceEEEEeecccCC--CCCChHHHHHHHH
Q 011835 264 TAYGVEVEVENNPYDPSLMVFMDYRDCTKQEVPSFESDNPTFLYVMPMS--STRVFFEETCLASK--DGLPFDILKKKLM 339 (476)
Q Consensus 264 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~~~~~~~~~--~~~~~~~~~~~l~ 339 (476)
...|....++..+........+. .. .|+.|.. ++++.+|.+..... .....+.. +.+.
T Consensus 486 p~rGq~~~~~~~~~~~~l~~~l~---------------~~--~Yl~P~~~~~g~~~iG~t~~~~~~d~~~~~~~~-~~~l 547 (676)
T 3ps9_A 486 SVAGQVSHIPTTPELAELKQVLC---------------YD--GYLTPQNPANQHHCIGASYHRGSEDTAYSEDDQ-QQNR 547 (676)
T ss_dssp EEEEEEEEEECCTTGGGCCSEEE---------------SS--SEECCCBTTTTEEEEECCCEETCCCCCCCHHHH-HHHH
T ss_pred eecCEEEEECCCcccccCCceeE---------------CC--eeeccccCCCCeEEEeeccCCCCCCCCCCHHHH-HHHH
Confidence 45666666553221100001110 01 4678887 67888876532221 12222222 2223
Q ss_pred HHHHHcCCccc-------ceeEEEEEEeeCCCCCCCCCCCeeEecccc----------------------------CccC
Q 011835 340 ARLERLGIQVL-------KTYEEEWSYIPVGGSLPNTEQRNLAFGAAA----------------------------SMVH 384 (476)
Q Consensus 340 ~~~~~~~~~~~-------~~~~~~~~~~p~~~~~~~~~~rv~liGDAA----------------------------h~~~ 384 (476)
+.+..+-+.+. .+.....+..|+ +.++..+||... ....
T Consensus 548 ~~l~~~~P~l~~~~~~d~~~~~~~~G~R~~------t~D~lPiiG~~p~~~~~~~~y~~l~~~~~~~~~~~~~~~l~~a~ 621 (676)
T 3ps9_A 548 QRLIDCFPQAQWAKEVDVSDKEARCGVRCA------TRDHLPMVGNVPDYEATLVEYASLAEQKDEAVSAPVFDDLFMFA 621 (676)
T ss_dssp HHHHHHSTTCHHHHTCCCTTCCEEEEEEEE------CTTCCCEEEEEECHHHHHHHTTTTTSCCTTCCSCCEEEEEEEEE
T ss_pred HHHHHhCCCccccccCcccccceEEEEeCc------cCCcCCccCcCCChHHHHHHHHhhhccccccccCCCCCCEeeee
Confidence 33333322221 123333444444 345566666432 2334
Q ss_pred CcchHHHHHHHHhHHHHHHHHH
Q 011835 385 PATGYSVVRSLSEAPNYASAIA 406 (476)
Q Consensus 385 P~~G~G~~~Al~da~~la~~l~ 406 (476)
.+.|.|+..|...|.+||+.|.
T Consensus 622 G~g~~Gl~~Ap~~ae~lA~~i~ 643 (676)
T 3ps9_A 622 ALGSRGLCSAPLCAEILAAQMS 643 (676)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHT
T ss_pred cccccHHHHHHHHHHHHHHHHc
Confidence 5667887777777777666663
No 38
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.71 E-value=9.4e-16 Score=164.44 Aligned_cols=116 Identities=10% Similarity=0.125 Sum_probs=80.3
Q ss_pred cceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCce-EEECceEEEccCCCCCCccccccCCCcccc
Q 011835 185 YGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDM-IVPCRLATVASGAASGKLLEYEVGGPKVSV 262 (476)
Q Consensus 185 ~~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~-~i~a~~vV~A~G~~S~~~~~~~~~~~~~~~ 262 (476)
.+.++...+...|.+.+++.|++++ +++|+++..+++ .+.|.+.+|. +++||.||+|+|.+|..+..... ...
T Consensus 406 ~g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~-~v~V~t~~G~~~i~Ad~VVlAtG~~s~~l~~~~~----lpl 480 (689)
T 3pvc_A 406 GGWLCPSDLTHALMMLAQQNGMTCHYQHELQRLKRIDS-QWQLTFGQSQAAKHHATVILATGHRLPEWEQTHH----LPL 480 (689)
T ss_dssp CEEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEECSS-SEEEEEC-CCCCEEESEEEECCGGGTTCSTTTTT----SCC
T ss_pred CeEECHHHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCC-eEEEEeCCCcEEEECCEEEECCCcchhccccccC----Ccc
Confidence 3467888999999999999999999 999999999877 4778888876 79999999999999876554331 134
Q ss_pred eeEEEEEEEeeCCCCCCCceeeeccCCCCCCCccccCCCCCeEEEEEEcC--CceEEEEeec
Q 011835 263 QTAYGVEVEVENNPYDPSLMVFMDYRDCTKQEVPSFESDNPTFLYVMPMS--STRVFFEETC 322 (476)
Q Consensus 263 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~~~~~ 322 (476)
....|....++..+.......++. . . .|+.|.. ++++.+|.+.
T Consensus 481 ~p~rGq~~~~~~~~~~~~l~~v~~-------------~--~--~Yl~P~~~~~g~~~iGat~ 525 (689)
T 3pvc_A 481 SAVRGQVSHIPTTPVLSQLQQVLC-------------Y--D--GYLTPVNPANQHHCIGASY 525 (689)
T ss_dssp EEEEEEEEEEECCTTGGGCCSEEE-------------S--S--SEECCCBTTTTEEEEECCC
T ss_pred ccccCcEEEECCCCccccCCeeEe-------------C--C--ceEccccCCCCeEEEEEec
Confidence 455666666553221100011111 0 1 4778887 7888887653
No 39
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.69 E-value=3.1e-15 Score=149.88 Aligned_cols=64 Identities=14% Similarity=0.182 Sum_probs=53.5
Q ss_pred ceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCCCCcc
Q 011835 186 GRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGKLL 251 (476)
Q Consensus 186 ~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S~~~~ 251 (476)
+.++...+...|.+.+.+.|++++ +++|++++.+++ .+.|.+.++ +++||.||+|+|.++..+.
T Consensus 148 g~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~-~v~v~t~~g-~i~a~~VV~A~G~~s~~l~ 212 (397)
T 2oln_A 148 GTIDVRGTLAALFTLAQAAGATLRAGETVTELVPDAD-GVSVTTDRG-TYRAGKVVLACGPYTNDLL 212 (397)
T ss_dssp EEEEHHHHHHHHHHHHHHTTCEEEESCCEEEEEEETT-EEEEEESSC-EEEEEEEEECCGGGHHHHH
T ss_pred CEEcHHHHHHHHHHHHHHcCCEEECCCEEEEEEEcCC-eEEEEECCC-EEEcCEEEEcCCcChHHHh
Confidence 467788899999999999999999 999999998776 466776665 6999999999999875443
No 40
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.67 E-value=1.5e-14 Score=149.46 Aligned_cols=207 Identities=11% Similarity=0.018 Sum_probs=121.6
Q ss_pred ceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEec---Cce--EEECceEEEccCCCCCCccc--cccCC
Q 011835 186 GRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACE---HDM--IVPCRLATVASGAASGKLLE--YEVGG 257 (476)
Q Consensus 186 ~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~---~g~--~i~a~~vV~A~G~~S~~~~~--~~~~~ 257 (476)
+.++...+...|.+.+.+.|++++ +++|+++..+++ .+.|.+. +|+ +++||.||+|+|.+|..+.. +....
T Consensus 144 g~v~~~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~~-~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~~l~~~~l~~~~ 222 (501)
T 2qcu_A 144 CWVDDARLVLANAQMVVRKGGEVLTRTRATSARRENG-LWIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFDDGMHLPS 222 (501)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEECSEEEEEEEEETT-EEEEEEEETTTCCEEEEEESCEEECCGGGHHHHHHHHTCCCC
T ss_pred CEEcHHHHHHHHHHHHHHcCCEEEcCcEEEEEEEeCC-EEEEEEEECCCCCEEEEECCEEEECCChhHHHHHHHhccCCc
Confidence 467899999999999999999999 999999998775 6777773 454 79999999999999965544 22111
Q ss_pred CcccceeEEEEEEEeeCCCCCCCceeeeccCCCCCCCccccCCCCCeEEEEEEcCCceEEEEeecccCC----CCCChHH
Q 011835 258 PKVSVQTAYGVEVEVENNPYDPSLMVFMDYRDCTKQEVPSFESDNPTFLYVMPMSSTRVFFEETCLASK----DGLPFDI 333 (476)
Q Consensus 258 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~----~~~~~~~ 333 (476)
........|..+.++. ..+.....++. .....++|++|..++.+.+|.+..... .....++
T Consensus 223 -~~~i~p~rG~~~~~~~-~~~~~~~~~~~-------------~~dg~~~~~~P~~~g~~~iG~t~~~~~~~~~~~~~~~~ 287 (501)
T 2qcu_A 223 -PYGIRLIKGSHIVVPR-VHTQKQAYILQ-------------NEDKRIVFVIPWMDEFSIIGTTDVEYKGDPKAVKIEES 287 (501)
T ss_dssp -SSCBCCEEEEEEEEEC-SSSCSCEEEEE-------------CTTSCEEEEEEETTTEEEEECCCEECCSCGGGCCCCHH
T ss_pred -ccccccceeEEEEECC-CCCCceEEEee-------------cCCCCEEEEEEcCCCcEEEcCCCCCCCCCcCCCCCCHH
Confidence 1134445566665552 22222222211 111246899999888888886532211 1112233
Q ss_pred HHHHHHHHHHHcCC---cccceeEEEEEEeeCCCC-CCC----CCCCeeE--eccccCccCCcchHHHHHHHHhHHHHHH
Q 011835 334 LKKKLMARLERLGI---QVLKTYEEEWSYIPVGGS-LPN----TEQRNLA--FGAAASMVHPATGYSVVRSLSEAPNYAS 403 (476)
Q Consensus 334 ~~~~l~~~~~~~~~---~~~~~~~~~~~~~p~~~~-~~~----~~~rv~l--iGDAAh~~~P~~G~G~~~Al~da~~la~ 403 (476)
..+.+.+.+..+-+ ...+++....+..|+... .|. ..+.++. .++..+.+...+|.|+..+-.-|..+++
T Consensus 288 ~~~~l~~~~~~~~p~~l~~~~v~~~~aG~Rp~~~d~~p~~~~~~~~~~i~~~~~~~~~gl~~i~Gg~~t~~~~~Ae~~~~ 367 (501)
T 2qcu_A 288 EINYLLNVYNTHFKKQLSRDDIVWTYSGVRPLCDDESDSPQAITRDYTLDIHDENGKAPLLSVFGGKLTTYRKLAEHALE 367 (501)
T ss_dssp HHHHHHHHHHHHBSSCCCGGGCCEEEEEEECCBCCCCSSGGGSCCCCEEEEEEETTEEEEEEEECCCGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCcccEEEEEEEEeeecCCCCCccccCcCceEEEecccCCCCCeEEEeCccccchHHHHHHHHH
Confidence 33444444444322 223555556677777432 121 2244555 4665555566667664444444444444
Q ss_pred HHHHH
Q 011835 404 AIAYI 408 (476)
Q Consensus 404 ~l~~~ 408 (476)
.+.+.
T Consensus 368 ~~~~~ 372 (501)
T 2qcu_A 368 KLTPY 372 (501)
T ss_dssp HHGGG
T ss_pred HHHHh
Confidence 44433
No 41
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.66 E-value=6.5e-15 Score=153.86 Aligned_cols=209 Identities=16% Similarity=0.141 Sum_probs=124.3
Q ss_pred eecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecC---c--eEEECceEEEccCCCCCCccccccCCCcc
Q 011835 187 RVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEH---D--MIVPCRLATVASGAASGKLLEYEVGGPKV 260 (476)
Q Consensus 187 ~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~---g--~~i~a~~vV~A~G~~S~~~~~~~~~~~~~ 260 (476)
.++...|...|.+.+.+.|++++ +++|+++..+++++++|.+.+ | .+++||.||+|+|.+|..+..........
T Consensus 166 ~vd~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s~~l~~~~g~~~~~ 245 (561)
T 3da1_A 166 RTDDARLTLEIMKEAVARGAVALNYMKVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWVDTLREKDRSKHGK 245 (561)
T ss_dssp ECCHHHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCGGGHHHHHHTTTCCCSS
T ss_pred eEcHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCeEEEEEEEEcCCCceEEEECCEEEECCCcchHHHHHhcCCCCCc
Confidence 57888899999999999999999 899999999877566777654 3 57999999999999996555443222122
Q ss_pred cceeEEEEEEEeeCCCCCCCceeeeccCCCCCCCccccCCCCCeEEEEEEcCCceEEEEeeccc----CCCCCChHHHHH
Q 011835 261 SVQTAYGVEVEVENNPYDPSLMVFMDYRDCTKQEVPSFESDNPTFLYVMPMSSTRVFFEETCLA----SKDGLPFDILKK 336 (476)
Q Consensus 261 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~----~~~~~~~~~~~~ 336 (476)
......|..+.++....+.....++.. .. ...++|++|. ++.+.+|.+... ..+....++-.+
T Consensus 246 ~v~p~kG~~lvl~~~~~~~~~~~~~~~-----------~~-dgr~v~~iP~-~g~~~iGtT~~~~~~~~~~~~~t~~~i~ 312 (561)
T 3da1_A 246 YLKLSKGVHLVVDQSRFPLRQAVYFDT-----------ES-DGRMIFAIPR-EGKTYIGTTDTFYDKDIASPRMTVEDRD 312 (561)
T ss_dssp EEEEEEEEEEEEEGGGSCCSSEEEECC-----------SS-SCCCEEEEEE-TTEEEECCCCEEECSCTTCCCCCHHHHH
T ss_pred eEEeccEEEEEECCccCCCceEEEecc-----------CC-CCcEEEEEec-CCCEEEcCCCCccCCCcCCCCCCHHHHH
Confidence 445566777666643333333333211 01 1235788999 567888876421 112222223233
Q ss_pred HHHHHHHHcCC----cccceeEEEEEEeeCCCC----CCC-CCCCeeEeccccCccCCcchHHHHHHHHhHHHHHHHHHH
Q 011835 337 KLMARLERLGI----QVLKTYEEEWSYIPVGGS----LPN-TEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAY 407 (476)
Q Consensus 337 ~l~~~~~~~~~----~~~~~~~~~~~~~p~~~~----~~~-~~~rv~liGDAAh~~~P~~G~G~~~Al~da~~la~~l~~ 407 (476)
.+.+.+..+-+ ...+++....+..|+... ... ..+.++..+ ..+.++-++|. ++.+-.-|..+.+.+.+
T Consensus 313 ~ll~~~~~~~P~l~~~~~~v~~~~aGlRPl~~~~~~~~~~~sR~~~i~~~-~~gli~i~Ggk-~Tt~r~mAe~~~d~~~~ 390 (561)
T 3da1_A 313 YILAAANYMFPSLRLTADDVESSWAGLRPLIHEEGKKASEISRKDEIFFS-DSGLISIAGGK-LTGYRKMAERTVDAVAQ 390 (561)
T ss_dssp HHHHHHHHHCTTCCCCTTTEEEEEEEEEEEEEC-----------CCEEEC-SSCCEEECCCC-STTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCChhhEEEEeEEeccccCCCCCCccccccceEEEec-CCCeEEEeCCh-hhhHHHHHHHHHHHHHH
Confidence 44444433322 244666667777786321 111 223344444 35666666666 55556666666666666
Q ss_pred Hhc
Q 011835 408 ILK 410 (476)
Q Consensus 408 ~l~ 410 (476)
.+.
T Consensus 391 ~~~ 393 (561)
T 3da1_A 391 GLN 393 (561)
T ss_dssp HHT
T ss_pred hcC
Confidence 654
No 42
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.66 E-value=2.2e-15 Score=149.48 Aligned_cols=67 Identities=18% Similarity=0.211 Sum_probs=56.5
Q ss_pred CcceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCCCCccc
Q 011835 184 AYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGKLLE 252 (476)
Q Consensus 184 ~~~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S~~~~~ 252 (476)
..+.++...+...|.+.+.+.|++++ +++|++++.+++ .+.|.+.+|+ ++||.||+|+|.+|..+..
T Consensus 142 ~~g~~~~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~-~~~v~~~~g~-~~a~~vV~a~G~~s~~l~~ 209 (372)
T 2uzz_A 142 DSGFLRSELAIKTWIQLAKEAGCAQLFNCPVTAIRHDDD-GVTIETADGE-YQAKKAIVCAGTWVKDLLP 209 (372)
T ss_dssp SCEEEEHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSS-SEEEEESSCE-EEEEEEEECCGGGGGGTST
T ss_pred CCcEEcHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEcCC-EEEEEECCCe-EEcCEEEEcCCccHHhhcc
Confidence 34567888899999999999999999 999999998776 4677777775 9999999999999865543
No 43
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.64 E-value=7.4e-15 Score=149.17 Aligned_cols=67 Identities=15% Similarity=0.232 Sum_probs=59.5
Q ss_pred ceecHHHHHHHHHHHHHHCCCeEE-EE---EEEEEEEcCCceEEEEecCceEEECceEEEccCCCCCCccc
Q 011835 186 GRVSRHLLHEELLRRCVESGVSYL-SS---KVESITESTSGHRLVACEHDMIVPCRLATVASGAASGKLLE 252 (476)
Q Consensus 186 ~~i~r~~l~~~L~~~~~~~gv~i~-~~---~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S~~~~~ 252 (476)
+.++...+...|.+.+++.|++++ ++ +|+++..+++++.+|.+.+|++++||.||+|+|++|..+..
T Consensus 156 g~~~~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~~G~~i~Ad~VV~AtG~~s~~l~~ 226 (438)
T 3dje_A 156 GWAHARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFENNDVKGAVTADGKIWRAERTFLCAGASAGQFLD 226 (438)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEETTEEEEEEETTTEEEECSEEEECCGGGGGGTSC
T ss_pred EEecHHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecCCeEEEEEECCCCEEECCEEEECCCCChhhhcC
Confidence 678888999999999999999999 88 99999988775555999999889999999999999976665
No 44
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.61 E-value=3e-14 Score=145.14 Aligned_cols=209 Identities=12% Similarity=0.043 Sum_probs=113.3
Q ss_pred cceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEE---------------cCCceEEEEecCceEE--ECceEEEccCCC
Q 011835 185 YGRVSRHLLHEELLRRCVESGVSYL-SSKVESITE---------------STSGHRLVACEHDMIV--PCRLATVASGAA 246 (476)
Q Consensus 185 ~~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~---------------~~~~~~~v~~~~g~~i--~a~~vV~A~G~~ 246 (476)
.+.++...+...|.+.+++.|++++ +++|+++.. ++++++.|.+.+| ++ +||.||+|+|.+
T Consensus 175 ~~~~~~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~~ 253 (448)
T 3axb_A 175 AGFLDAEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGVW 253 (448)
T ss_dssp EEECCHHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGGG
T ss_pred CeEEcHHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCcC
Confidence 3467888999999999999999999 899999987 4443457888777 58 999999999999
Q ss_pred CCCccccccCCCcccceeEEEEEEEeeCCCCCCCc-eeeeccCCCCCCCccccCCCCCeEEEEEEcCC-ceEEEEeeccc
Q 011835 247 SGKLLEYEVGGPKVSVQTAYGVEVEVENNPYDPSL-MVFMDYRDCTKQEVPSFESDNPTFLYVMPMSS-TRVFFEETCLA 324 (476)
Q Consensus 247 S~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~~~~~ 324 (476)
+..+...... ........+..+.++........ .....+.... ....+... ...|+.|..+ +++.+|.+...
T Consensus 254 s~~l~~~~g~--~~~~~p~rg~~~~~~~~~~~~~~~~~~~~~~~~~--~~p~~~~~--~~~y~~p~~~~g~~~iG~~~~~ 327 (448)
T 3axb_A 254 SNRLLNPLGI--DTFSRPKKRMVFRVSASTEGLRRIMREGDLAGAG--APPLIILP--KRVLVRPAPREGSFWVQLSDNL 327 (448)
T ss_dssp HHHHHGGGTC--CCSEEEEEEEEEEEECCSHHHHHHHHHCCTTSSS--SCCEEEET--TTEEEEEETTTTEEEEEECCCT
T ss_pred HHHHHHHcCC--CCcccccceEEEEeCCcccccccccccccccccC--CCceEEcC--CceEEeecCCCCeEEEecCCcc
Confidence 8644433211 12334445555555432110000 0000000000 00000001 2367889888 78888876431
Q ss_pred ----CCCC--CChHHH-HHHHHHHHHHcCCccc--ceeEEEEEEeeCCCCCCCCCCCeeEecccc---CccCCcchHHHH
Q 011835 325 ----SKDG--LPFDIL-KKKLMARLERLGIQVL--KTYEEEWSYIPVGGSLPNTEQRNLAFGAAA---SMVHPATGYSVV 392 (476)
Q Consensus 325 ----~~~~--~~~~~~-~~~l~~~~~~~~~~~~--~~~~~~~~~~p~~~~~~~~~~rv~liGDAA---h~~~P~~G~G~~ 392 (476)
.... ...... .+.+.+.+.++-+.+. ++.....+.+|.. +.++.++||... ....-+.|.|+.
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~P~l~~~~~~~~w~G~r~~~-----t~d~~p~ig~~~~~l~~a~G~~g~G~~ 402 (448)
T 3axb_A 328 GRPFALEEDPQPEEHYYSLAILPILSLYLPQFQDAYPSGGWAGHYDIS-----FDANPVVFEPWESGIVVAAGTSGSGIM 402 (448)
T ss_dssp TSCBCCCSSCCCCHHHHHHHTHHHHHHHCGGGTTCCCSEEEEEEEEEE-----TTSSCEEECGGGCSEEEEECCTTCCGG
T ss_pred cCCcccccccCCChHHHHHHHHHHHHHhCcCcccCCcccceEEEeccc-----cCCCCcEeeecCCCEEEEECCCchhHh
Confidence 1111 222333 4555555555433332 3444444555551 234556676532 122234566755
Q ss_pred HHHHhHHHHHHHH
Q 011835 393 RSLSEAPNYASAI 405 (476)
Q Consensus 393 ~Al~da~~la~~l 405 (476)
.|...|..+|+.|
T Consensus 403 ~ap~~g~~la~~i 415 (448)
T 3axb_A 403 KSDSIGRVAAAVA 415 (448)
T ss_dssp GHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHH
Confidence 5555544444444
No 45
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=99.61 E-value=1.7e-14 Score=145.00 Aligned_cols=194 Identities=18% Similarity=0.138 Sum_probs=109.0
Q ss_pred CcccEEEECCCHHHHHHHHHHHHc--CCcEEEECCCCCCCCC----cc--cc-hHH-------HH--hcCcchhh-----
Q 011835 106 GILDLVVIGCGPAGLALAAESAKL--GLNVGLIGPDLPFTNN----YG--VW-EDE-------FR--DLGLEGCI----- 162 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~--G~~V~liE~~~~~~~~----~G--~~-~~~-------l~--~~~~~~~~----- 162 (476)
..+||+|||||++|+++|+.|+++ |++|+|||+....... .| +| ... +. .+.+....
T Consensus 35 ~~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~~~~s~~~~g~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 114 (405)
T 3c4n_A 35 EAFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLPNEEGATILAPGVWTAQDIPAGQEAQAEWTREQLLGALGSGK 114 (405)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSSCTTSHHHHCCCEECGGGCCTTCHHHHHHHHHHHHTGGGSSC
T ss_pred CcCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCCCcchhccCCcceeecccCCchHHHHHHHHHHHHHHHhCCCC
Confidence 458999999999999999999999 9999999986533211 12 11 000 00 00000000
Q ss_pred hhhccc-ceee-e---------------------------CCCCCEEeccCcceecHHHHHHHHHHHHHHCCCeEE-EEE
Q 011835 163 EHVWRD-TVVY-I---------------------------DEDEPILIGRAYGRVSRHLLHEELLRRCVESGVSYL-SSK 212 (476)
Q Consensus 163 ~~~~~~-~~~~-~---------------------------~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~gv~i~-~~~ 212 (476)
...+.. ..+. . .......+....+.++...+...|.+.+.+.|++++ +++
T Consensus 115 ~~~~~~~g~l~~~~~~~~~g~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~v~~~~l~~~L~~~~~~~Gv~i~~~~~ 194 (405)
T 3c4n_A 115 TLEVEDRPLLHLLPAGEGSGLTPTLDALADFPEALALLDPARLPVARVDPRALTYRPGSLALLAAQQAIGQGAGLLLNTR 194 (405)
T ss_dssp CCCEEECCEEEEESSCCSSSCEEHHHHTTTCHHHHTTSCTTTSCEEEEETTCEEECHHHHHHHHHHHHHTTTCEEECSCE
T ss_pred CCcEEeeCeEEehhhHhHCCCCCHHHHHHhCCCccccccCCcceEEEEcCCCEEEcHHHHHHHHHHHHHHCCCEEEcCCE
Confidence 000000 0000 0 000001122334567888999999999999999999 999
Q ss_pred EE---------EEEEcCCceEEEEecCceEEECceEEEccCCCCCCccc-cccCCCcccceeEEEEEEEeeCCCCCCCce
Q 011835 213 VE---------SITESTSGHRLVACEHDMIVPCRLATVASGAASGKLLE-YEVGGPKVSVQTAYGVEVEVENNPYDPSLM 282 (476)
Q Consensus 213 v~---------~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 282 (476)
|+ ++..+++ .+.|.+.+| +++||.||+|+|.+|..+.. ..... ......++..+.+..+. .. ..
T Consensus 195 v~~~~g~~~~~~i~~~~~-~v~v~~~~g-~i~a~~VV~A~G~~s~~l~~~~~g~~--~~~~~~~g~~~~~~~~~-~~-~~ 268 (405)
T 3c4n_A 195 AELVPGGVRLHRLTVTNT-HQIVVHETR-QIRAGVIIVAAGAAGPALVEQGLGLH--TRHGRAYRQFPRLDLLS-GA-QT 268 (405)
T ss_dssp EEEETTEEEEECBCC--------CBCCE-EEEEEEEEECCGGGHHHHHHHHHCCC--CCCEEEEEECCEECSCC-CT-TC
T ss_pred EEeccccccccceEeeCC-eEEEEECCc-EEECCEEEECCCccHHHHHHHhcCCC--CCcccceeEEEEECCCC-cc-CC
Confidence 99 8876655 346666666 79999999999999854443 22111 12234455554443211 10 00
Q ss_pred eeeccCCCCCCCccccCCCCCeEEEEEEcCCceEEEEee
Q 011835 283 VFMDYRDCTKQEVPSFESDNPTFLYVMPMSSTRVFFEET 321 (476)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 321 (476)
.++. . ..+|+.|..++.+.+|.+
T Consensus 269 ~~~~--------------~--~~~y~~p~~~g~~~~G~t 291 (405)
T 3c4n_A 269 PVLR--------------A--SGLTLRPQNGGYTLVPAI 291 (405)
T ss_dssp CEEE--------------E--TTEEEEEETTEEEEECCC
T ss_pred CeEE--------------C--CcEEEEEcCCCeEEEecc
Confidence 0110 1 127889998887777654
No 46
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=99.58 E-value=1.9e-13 Score=135.12 Aligned_cols=186 Identities=13% Similarity=0.103 Sum_probs=109.8
Q ss_pred ceecHHHHHHHHHHHHHHCCCeEEEEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCCCCccccccCCCcccceeE
Q 011835 186 GRVSRHLLHEELLRRCVESGVSYLSSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGKLLEYEVGGPKVSVQTA 265 (476)
Q Consensus 186 ~~i~r~~l~~~L~~~~~~~gv~i~~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S~~~~~~~~~~~~~~~~~~ 265 (476)
+.++...+...|.+.+.+.|++++.++|+++..+ .+ +||.||+|+|.+|..+.... .......
T Consensus 137 ~~v~p~~~~~~l~~~~~~~G~~i~~~~v~~l~~~------------~~-~a~~VV~A~G~~s~~l~~~~----~~~~~p~ 199 (363)
T 1c0p_A 137 LSVHAPKYCQYLARELQKLGATFERRTVTSLEQA------------FD-GADLVVNATGLGAKSIAGID----DQAAEPI 199 (363)
T ss_dssp EECCHHHHHHHHHHHHHHTTCEEEECCCSBGGGT------------CS-SCSEEEECCGGGGGTSBTTC----CTTEEEE
T ss_pred ceecHHHHHHHHHHHHHHCCCEEEEEEcccHhhc------------Cc-CCCEEEECCCcchhhccCcc----cCCcccc
Confidence 4688999999999999999999887777666432 12 79999999999997665431 1134455
Q ss_pred EEEEEEeeCCCCCCCceeeeccCCCCCCCccccCCCCCeEEEEEEcCCceEEEEeecccCC-CCCChHHHHHHHHHHHHH
Q 011835 266 YGVEVEVENNPYDPSLMVFMDYRDCTKQEVPSFESDNPTFLYVMPMSSTRVFFEETCLASK-DGLPFDILKKKLMARLER 344 (476)
Q Consensus 266 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~ 344 (476)
.|..+.++... .. ..+.. .... ...|++|..++++.+|.+..... +..+.....+.+.+.+.+
T Consensus 200 rg~~~~~~~~~-~~--~~~~~------------~~~~-~~~y~~p~~~g~~~iG~t~~~~~~~~~~~~~~~~~l~~~~~~ 263 (363)
T 1c0p_A 200 RGQTVLVKSPC-KR--CTMDS------------SDPA-SPAYIIPRPGGEVICGGTYGVGDWDLSVNPETVQRILKHCLR 263 (363)
T ss_dssp EEEEEEEECCC-CC--CEEEC------------SCTT-CCEEEEEETTTEEEEECCCEETCCCCSCCHHHHHHHHHHHHH
T ss_pred CCeEEEEeCCc-cc--ceEee------------ccCC-CcEEEEEcCCCEEEEEeeeccCCCCCCCCHHHHHHHHHHHHH
Confidence 66666555332 11 11100 0011 12788998888888886532221 111222333444444444
Q ss_pred cCCcc--------cceeEEEEEEeeCCCCCCCCCCCeeEec---------------------cccC-------ccCCcch
Q 011835 345 LGIQV--------LKTYEEEWSYIPVGGSLPNTEQRNLAFG---------------------AAAS-------MVHPATG 388 (476)
Q Consensus 345 ~~~~~--------~~~~~~~~~~~p~~~~~~~~~~rv~liG---------------------DAAh-------~~~P~~G 388 (476)
+-+.+ .++.....+.+|.. .++..++| +... ...-+.|
T Consensus 264 ~~P~l~~~~~~~~~~i~~~w~G~rp~t------~d~~piig~~~~~~~~~~~~~~d~~~~~g~~p~~~~~~~~~a~G~~g 337 (363)
T 1c0p_A 264 LDPTISSDGTIEGIEVLRHNVGLRPAR------RGGPRVEAERIVLPLDRTKSPLSLGRGSARAAKEKEVTLVHAYGFSS 337 (363)
T ss_dssp HCGGGSSSSSGGGCEEEEEEEEEEEEE------TTSCEEEEEEEEESCCTTTCTTCSSCTTCCCSCCEEEEEEEEECCTT
T ss_pred hCccccCCcccccceEeeceEEECCCC------CCCceeEEEecccccccccCccccccccccccccccceEEEecCCCC
Confidence 43333 24444445555542 22333333 2221 2345678
Q ss_pred HHHHHHHHhHHHHHHHHHHHhc
Q 011835 389 YSVVRSLSEAPNYASAIAYILK 410 (476)
Q Consensus 389 ~G~~~Al~da~~la~~l~~~l~ 410 (476)
.|+..|...|..+|+.|...+.
T Consensus 338 ~G~~~a~~~g~~~a~li~~~l~ 359 (363)
T 1c0p_A 338 AGYQQSWGAAEDVAQLVDEAFQ 359 (363)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchheeccHHHHHHHHHHHHHH
Confidence 8999999999999998887653
No 47
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=99.54 E-value=3.4e-13 Score=132.66 Aligned_cols=192 Identities=17% Similarity=0.110 Sum_probs=112.6
Q ss_pred ceecHHHHHHHHHHHHHHCCCeEEEEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCCCCccccccCCCcccceeE
Q 011835 186 GRVSRHLLHEELLRRCVESGVSYLSSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGKLLEYEVGGPKVSVQTA 265 (476)
Q Consensus 186 ~~i~r~~l~~~L~~~~~~~gv~i~~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S~~~~~~~~~~~~~~~~~~ 265 (476)
+.++...+...|.+.+++.|++++.++|++++..+ .++||.||+|+|.+|..+... ......
T Consensus 137 ~~v~p~~~~~~l~~~~~~~Gv~i~~~~V~~i~~~~------------~~~a~~VV~A~G~~s~~l~~~------~~l~p~ 198 (351)
T 3g3e_A 137 LILEGKNYLQWLTERLTERGVKFFQRKVESFEEVA------------REGADVIVNCTGVWAGALQRD------PLLQPG 198 (351)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEEECCCCCHHHHH------------HTTCSEEEECCGGGGGGTSCC------TTCEEE
T ss_pred eEEcHHHHHHHHHHHHHHCCCEEEEEEeCCHHHhh------------cCCCCEEEECCCcChHhhcCC------Cceeec
Confidence 56888999999999999999998876776554321 267999999999999765431 234456
Q ss_pred EEEEEEeeCCCCCCCceeeeccCCCCCCCccccCCCCCeEEEEEEcCCceEEEEeecccC-CCCCChHHHHHHHHHHHHH
Q 011835 266 YGVEVEVENNPYDPSLMVFMDYRDCTKQEVPSFESDNPTFLYVMPMSSTRVFFEETCLAS-KDGLPFDILKKKLMARLER 344 (476)
Q Consensus 266 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~ 344 (476)
.|..+.++.+. .....+.... ......+.|+.|..+ .+.+|.+.... .+..+..+..+.+.+.+.+
T Consensus 199 rg~~~~~~~~~--~~~~~~~~~~----------~~~~~~~~y~~p~~~-~~~iGg~~~~~~~~~~~~~~~~~~l~~~~~~ 265 (351)
T 3g3e_A 199 RGQIMKVDAPW--MKHFILTHDP----------ERGIYNSPYIIPGTQ-TVTLGGIFQLGNWSELNNIQDHNTIWEGCCR 265 (351)
T ss_dssp EEEEEEEECTT--CCSEEEECCT----------TTCTTCSCEEEECSS-CEEEECCCEETCCCCSCCHHHHHHHHHHHHH
T ss_pred CCcEEEEeCCC--cceEEEeccc----------cCCCCceeEEEeCCC-cEEEeeeeecCCCCCCCCHHHHHHHHHHHHH
Confidence 66666665422 1222221110 001123478899887 77777543221 1222223334455555555
Q ss_pred cCCccc--ceeEEEEEEeeCCCCCCCCCCCeeEeccc-----cCccCCcchHHHHHHHHhHHHHHHHHHHHhcc
Q 011835 345 LGIQVL--KTYEEEWSYIPVGGSLPNTEQRNLAFGAA-----ASMVHPATGYSVVRSLSEAPNYASAIAYILKH 411 (476)
Q Consensus 345 ~~~~~~--~~~~~~~~~~p~~~~~~~~~~rv~liGDA-----Ah~~~P~~G~G~~~Al~da~~la~~l~~~l~~ 411 (476)
+-+.+. ++.....+.+|+....+. . -.++|-. .....-+.|.|+..|...|..+|+.|...++.
T Consensus 266 ~~P~l~~~~i~~~w~G~r~~t~D~p~-~--~~~ig~~~~~~~~~~~~G~~g~G~~~ap~~g~~la~li~~~~~~ 336 (351)
T 3g3e_A 266 LEPTLKNARIIGERTGFRPVRPQIRL-E--REQLRTGPSNTEVIHNYGHGGYGLTIHWGCALEAAKLFGRILEE 336 (351)
T ss_dssp HCGGGGGCEEEEEEEEEEEECSSCEE-E--EEEECCSSSCEEEEEEECCTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hCCCccCCcEeeeeEeeCCCCCCccc-e--eeeccCCCCCCeEEEEeCCCcchHhhhHHHHHHHHHHHHHHHHh
Confidence 444432 444445566666432110 0 0123321 11223467889999999999999999988765
No 48
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.53 E-value=1.5e-12 Score=136.28 Aligned_cols=211 Identities=13% Similarity=0.118 Sum_probs=115.3
Q ss_pred ceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEec---Cc--eEEECceEEEccCCCCCCccccccCCCc
Q 011835 186 GRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACE---HD--MIVPCRLATVASGAASGKLLEYEVGGPK 259 (476)
Q Consensus 186 ~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~---~g--~~i~a~~vV~A~G~~S~~~~~~~~~~~~ 259 (476)
+.++...+...|.+.+.+.|++++ +++|+++..++++++.|.+. +| .+++||.||+|+|.++..+.........
T Consensus 183 g~v~~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws~~l~~~~g~~~~ 262 (571)
T 2rgh_A 183 FRNNDARLVIDNIKKAAEDGAYLVSKMKAVGFLYEGDQIVGVKARDLLTDEVIEIKAKLVINTSGPWVDKVRNLNFTRPV 262 (571)
T ss_dssp EECCHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTCCEEEEEBSCEEECCGGGHHHHHTTCCSSCC
T ss_pred CeEchHHHHHHHHHHHHHcCCeEEeccEEEEEEEeCCEEEEEEEEEcCCCCEEEEEcCEEEECCChhHHHHHHhhccCcc
Confidence 356777888889999999999999 99999999887755667653 23 3799999999999998655443321111
Q ss_pred -ccceeEEEEEEEeeCCCCCCCceeeeccCCCCCCCccccCCCCCeEEEEEEcCCceEEEEeecccC----CCCCChHHH
Q 011835 260 -VSVQTAYGVEVEVENNPYDPSLMVFMDYRDCTKQEVPSFESDNPTFLYVMPMSSTRVFFEETCLAS----KDGLPFDIL 334 (476)
Q Consensus 260 -~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~----~~~~~~~~~ 334 (476)
.......|..+.++....+.....+++.. ......+|++|.. +.+.+|.+.... ......++-
T Consensus 263 ~~~i~p~rG~~l~~~~~~~~~~~~~~~~~~-----------~~dgr~~~~~P~~-~~~~iG~t~~~~~~~~~~~~~~~~~ 330 (571)
T 2rgh_A 263 SPKMRPTKGIHLVVDAKKLPVPQPTYFDTG-----------KQDGRMVFAIPRE-NKTYFGTTDTDYQGDFTDPKVTQED 330 (571)
T ss_dssp CCCBCCEEEEEEEEEGGGSCCSSCEEEECS-----------SSSSCEEEEEEET-TEEEECCCCEECCSCSSSCCCCHHH
T ss_pred CceeeccceEEEEeccccCCCCcEEEEecc-----------CCCCcEEEEEEcC-CeEEEcCCCcCCCCCcCCCCCCHHH
Confidence 23455667776665322221222222110 0112357889986 567787653211 112222233
Q ss_pred HHHHHHHHHHcCC----cccceeEEEEEEeeCCCCC---CCCCCCeeEeccc-cCccCCcchHHHHHHHHhHHHHHHHHH
Q 011835 335 KKKLMARLERLGI----QVLKTYEEEWSYIPVGGSL---PNTEQRNLAFGAA-ASMVHPATGYSVVRSLSEAPNYASAIA 406 (476)
Q Consensus 335 ~~~l~~~~~~~~~----~~~~~~~~~~~~~p~~~~~---~~~~~rv~liGDA-Ah~~~P~~G~G~~~Al~da~~la~~l~ 406 (476)
.+.+.+.+..+-+ ...++.....+..|+.... +..-.|-.++++. .+.++-++|. ++.+-.-|..+++.+.
T Consensus 331 ~~~ll~~~~~~~P~~~l~~~~v~~~waG~Rp~~~d~~~~~~~~~r~~~i~~~~~gl~~v~GGk-~Tt~r~~Ae~~~~~i~ 409 (571)
T 2rgh_A 331 VDYLLDVINHRYPEANITLADIEASWAGLRPLLIGNSGSPSTISRGSSLEREPDGLLTLSGGK-ITDYRKMAEGALRLIR 409 (571)
T ss_dssp HHHHHHHHHHHSTTTCCCGGGCCEEEEEEECCBCC-----------EEEEECTTSCEEEEECC-GGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCccCCchhceeEEeEEeeeccCCCCCCcccCCCCcEEecCCCCeEEEeCcc-hhhHHHHHHHHHHHHH
Confidence 3444444444332 2345566666777775321 1111121233322 2233223332 4555556666666666
Q ss_pred HHh
Q 011835 407 YIL 409 (476)
Q Consensus 407 ~~l 409 (476)
+.+
T Consensus 410 ~~l 412 (571)
T 2rgh_A 410 QLL 412 (571)
T ss_dssp HHH
T ss_pred HHh
Confidence 665
No 49
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.53 E-value=7.1e-14 Score=140.50 Aligned_cols=137 Identities=21% Similarity=0.185 Sum_probs=90.5
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCc-------------cc------------chHHHHhcCcc
Q 011835 105 NGILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNY-------------GV------------WEDEFRDLGLE 159 (476)
Q Consensus 105 ~~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~-------------G~------------~~~~l~~~~~~ 159 (476)
...+||+|||||+||+++|+.|++.|++|+|||+........ .. ....+..+...
T Consensus 25 ~~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~~ 104 (417)
T 3v76_A 25 AEKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRPQ 104 (417)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCHH
Confidence 456899999999999999999999999999999977543211 00 00111111111
Q ss_pred hhhhhhcc-cceeeeCCCCCEEeccCcceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCceEEECc
Q 011835 160 GCIEHVWR-DTVVYIDEDEPILIGRAYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCR 237 (476)
Q Consensus 160 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~ 237 (476)
..+...-. ......... +..+....+..+.+.|.+.+++.||+++ +++|+++..+++ .+.|.+.+| +++||
T Consensus 105 ~~~~~~~~~Gi~~~~~~~-----g~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~-~~~V~~~~g-~i~ad 177 (417)
T 3v76_A 105 DFVALVERHGIGWHEKTL-----GQLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTAS-GFRVTTSAG-TVDAA 177 (417)
T ss_dssp HHHHHHHHTTCCEEECST-----TEEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETT-EEEEEETTE-EEEES
T ss_pred HHHHHHHHcCCCcEEeeC-----CEEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCC-EEEEEECCc-EEEee
Confidence 11100000 000011111 0111134677899999999999999999 999999998877 678888887 79999
Q ss_pred eEEEccCCCCC
Q 011835 238 LATVASGAASG 248 (476)
Q Consensus 238 ~vV~A~G~~S~ 248 (476)
.||+|+|.+|.
T Consensus 178 ~VIlAtG~~S~ 188 (417)
T 3v76_A 178 SLVVASGGKSI 188 (417)
T ss_dssp EEEECCCCSSC
T ss_pred EEEECCCCccC
Confidence 99999999983
No 50
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.51 E-value=3.9e-13 Score=119.10 Aligned_cols=108 Identities=19% Similarity=0.213 Sum_probs=83.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcce
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (476)
+||+|||||++|+.+|..|++.|.+|+|+|+......... .+.. + + +.+ ..
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~~---------~~~~-----~-------~-------~~~-~~ 52 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKGVS---------RVPN-----Y-------P-------GLL-DE 52 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTCS---------CCCC-----S-------T-------TCT-TC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCch---------hhhc-----c-------C-------CCc-CC
Confidence 6999999999999999999999999999998763211100 0000 0 0 000 12
Q ss_pred ecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCC
Q 011835 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAAS 247 (476)
Q Consensus 188 i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S 247 (476)
+....+.+.+.+.+++.|++++ + +|++++.+++ .+.|.+.+| ++++|.||+|+|..+
T Consensus 53 ~~~~~~~~~l~~~~~~~gv~v~~~-~v~~i~~~~~-~~~v~~~~g-~i~ad~vI~A~G~~~ 110 (180)
T 2ywl_A 53 PSGEELLRRLEAHARRYGAEVRPG-VVKGVRDMGG-VFEVETEEG-VEKAERLLLCTHKDP 110 (180)
T ss_dssp CCHHHHHHHHHHHHHHTTCEEEEC-CCCEEEECSS-SEEEECSSC-EEEEEEEEECCTTCC
T ss_pred CCHHHHHHHHHHHHHHcCCEEEeC-EEEEEEEcCC-EEEEEECCC-EEEECEEEECCCCCC
Confidence 5567888999999999999999 8 9999998766 477888888 899999999999776
No 51
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.50 E-value=3.2e-12 Score=139.87 Aligned_cols=66 Identities=23% Similarity=0.290 Sum_probs=56.8
Q ss_pred cceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCCCCcc
Q 011835 185 YGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGKLL 251 (476)
Q Consensus 185 ~~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S~~~~ 251 (476)
.+.++...+...|.+.+.+.|++++ +++|+++..++++++.|.+.+| +++||.||+|+|.+|..+.
T Consensus 145 ~g~v~p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~~~v~~V~t~~G-~i~Ad~VV~AaG~~s~~l~ 211 (830)
T 1pj5_A 145 DGLASAARAVQLLIKRTESAGVTYRGSTTVTGIEQSGGRVTGVQTADG-VIPADIVVSCAGFWGAKIG 211 (830)
T ss_dssp CEEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTE-EEECSEEEECCGGGHHHHH
T ss_pred CceEcHHHHHHHHHHHHHHcCCEEECCceEEEEEEeCCEEEEEEECCc-EEECCEEEECCccchHHHH
Confidence 3567889999999999999999999 9999999987775567888777 7999999999999986543
No 52
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.46 E-value=5.4e-13 Score=123.36 Aligned_cols=124 Identities=14% Similarity=0.028 Sum_probs=87.6
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchH-HHHhcCcchhhhhhcccceeeeCCCCCEEeccCc
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWED-EFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAY 185 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (476)
.+||+|||||++|+++|+.|++.|.+|+|||+.... .|.+.. .+..+.....+.. ++ + ..
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~---~G~~~~~~~~~~~~~~~~~~-~~------d---------~~ 63 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDA---VMMPFLPPKPPFPPGSLLER-AY------D---------PK 63 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGG---TTCCSSCCCSCCCTTCHHHH-HC------C---------TT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCc---CCcccCccccccchhhHHhh-hc------c---------CC
Confidence 479999999999999999999999999999987321 111000 0000000000000 00 0 00
Q ss_pred ceecHHHHHHHHHHHHHHC-CCeEEEEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCCCCc
Q 011835 186 GRVSRHLLHEELLRRCVES-GVSYLSSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGKL 250 (476)
Q Consensus 186 ~~i~r~~l~~~L~~~~~~~-gv~i~~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S~~~ 250 (476)
+. ++..+...|.+.+++. |+++++++|+++..++++++.|.+.+|++++||.||+|+|.+|..+
T Consensus 64 g~-~~~~~~~~l~~~~~~~~gv~i~~~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~s~~~ 128 (232)
T 2cul_A 64 DE-RVWAFHARAKYLLEGLRPLHLFQATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSFLGAR 128 (232)
T ss_dssp CC-CHHHHHHHHHHHHHTCTTEEEEECCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTCSSCE
T ss_pred CC-CHHHHHHHHHHHHHcCCCcEEEEeEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChhhc
Confidence 11 6788999999999886 9999977999999877755678888888899999999999988544
No 53
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.44 E-value=1.3e-12 Score=132.93 Aligned_cols=141 Identities=20% Similarity=0.278 Sum_probs=91.4
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCc-------------ccchHHHHhcCcchh-hhh---hccc
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNY-------------GVWEDEFRDLGLEGC-IEH---VWRD 168 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~-------------G~~~~~l~~~~~~~~-~~~---~~~~ 168 (476)
..+||+|||||++|+++|+.|++.|++|+|||+........ ..+...+..+..... ... .+..
T Consensus 25 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (447)
T 2i0z_A 25 MHYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFNN 104 (447)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHSCH
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhcCH
Confidence 45899999999999999999999999999999976543210 011121222211100 000 0000
Q ss_pred --ceeeeC-CCCCEEeccCcc-e----ecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCceEEECceE
Q 011835 169 --TVVYID-EDEPILIGRAYG-R----VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLA 239 (476)
Q Consensus 169 --~~~~~~-~~~~~~~~~~~~-~----i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~v 239 (476)
...++. .+-..... ..+ . .....+.+.|.+.+++.||+++ +++|+++..++++++.|.+.+|++++||.|
T Consensus 105 ~~~~~~~~~~G~~~~~~-~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~~G~~i~Ad~V 183 (447)
T 2i0z_A 105 EDIITFFENLGVKLKEE-DHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQTGEVLETNHV 183 (447)
T ss_dssp HHHHHHHHHTTCCEEEC-GGGEEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTCCEEECSCE
T ss_pred HHHHHHHHhcCCceEEe-eCCEEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEECCCCEEECCEE
Confidence 000000 00000000 011 1 1357788999999999999999 999999998776558888888878999999
Q ss_pred EEccCCCC
Q 011835 240 TVASGAAS 247 (476)
Q Consensus 240 V~A~G~~S 247 (476)
|+|+|.+|
T Consensus 184 VlAtGg~s 191 (447)
T 2i0z_A 184 VIAVGGKS 191 (447)
T ss_dssp EECCCCSS
T ss_pred EECCCCCc
Confidence 99999999
No 54
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.44 E-value=1.1e-12 Score=136.79 Aligned_cols=140 Identities=14% Similarity=0.241 Sum_probs=94.0
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCC-CCC-Cc-----cc----chHHHHhcCcchhhhhhcccceee--
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLP-FTN-NY-----GV----WEDEFRDLGLEGCIEHVWRDTVVY-- 172 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~-~~~-~~-----G~----~~~~l~~~~~~~~~~~~~~~~~~~-- 172 (476)
..+||+|||||+||++||+.|++.|.+|+|||+... ... .+ |+ ..+.++.++- .+....+...+.
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg--~~~~~~d~~gi~f~ 104 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGG--LMAKAIDQAGIQFR 104 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTC--SHHHHHHHHEEEEE
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchhhHHHHHHHHHhcc--HHHHHhhhcccchh
Confidence 458999999999999999999999999999998742 211 11 11 1122222221 011111111111
Q ss_pred -eC-CCCCEEeccCcceecHHHHHHHHHHHHHH-CCCeEEEEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCCC
Q 011835 173 -ID-EDEPILIGRAYGRVSRHLLHEELLRRCVE-SGVSYLSSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASG 248 (476)
Q Consensus 173 -~~-~~~~~~~~~~~~~i~r~~l~~~L~~~~~~-~gv~i~~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S~ 248 (476)
.. ...+. ...+...+++..+...|.+.+++ .|+++++++|+++..+++.+++|.+.+|.++.||.||+|||.++.
T Consensus 105 ~l~~~kgpa-v~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~~~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VVLATGt~s~ 182 (651)
T 3ces_A 105 ILNASKGPA-VRATRAQADRVLYRQAVRTALENQPNLMIFQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLD 182 (651)
T ss_dssp EESTTSCGG-GCEEEEEECHHHHHHHHHHHHHTCTTEEEEECCEEEEEESSSBEEEEEETTSEEEEEEEEEECCSTTTC
T ss_pred hhhcccCcc-cccchhhCCHHHHHHHHHHHHHhCCCCEEEEEEEEEEEecCCEEEEEEECCCCEEECCEEEEcCCCCcc
Confidence 11 11000 00011257888999999999988 699999889999988777567888888988999999999999874
No 55
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.43 E-value=1.3e-12 Score=135.13 Aligned_cols=142 Identities=20% Similarity=0.321 Sum_probs=91.3
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCC----cccchHHHHhcCcchhh------hhhcccceeee-
Q 011835 105 NGILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNN----YGVWEDEFRDLGLEGCI------EHVWRDTVVYI- 173 (476)
Q Consensus 105 ~~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~----~G~~~~~l~~~~~~~~~------~~~~~~~~~~~- 173 (476)
...+||+||||||+|+++|+.|++.|++|+|||+....... .+.|... .+.....+ ...|.+...+.
T Consensus 105 ~~~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~~~~~g~w~~~--~~~~~~~i~~g~gGag~~sdgkl~~~ 182 (549)
T 3nlc_A 105 NLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKR--TLNPESNVQFGEGGAGTFSDGKLYSQ 182 (549)
T ss_dssp TCCCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHHHHHHHHHHHC--CCCTTSSSSSSTTGGGTTSCCCCCCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccccccchhcccccc--cccccccceeccCCcccccCCceEEE
Confidence 34589999999999999999999999999999997543110 0000000 00000000 00000000000
Q ss_pred ----------------CCCCC--E-Eec-cCcceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCce
Q 011835 174 ----------------DEDEP--I-LIG-RAYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDM 232 (476)
Q Consensus 174 ----------------~~~~~--~-~~~-~~~~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~ 232 (476)
..+.. . ... +..+......+.+.|.+.+++.|++++ +++|+++..++++...|.+.+|+
T Consensus 183 i~~~~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v~gV~l~~G~ 262 (549)
T 3nlc_A 183 VKDPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGE 262 (549)
T ss_dssp SCCTTCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTCEEESSCCEEEEEESSSBEEEEEETTSC
T ss_pred eccccccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCEEEEEEECCCC
Confidence 00000 0 000 111234457788889999999999999 99999999887767779999998
Q ss_pred EEECceEEEccCCCCC
Q 011835 233 IVPCRLATVASGAASG 248 (476)
Q Consensus 233 ~i~a~~vV~A~G~~S~ 248 (476)
++.||.||+|+|.++.
T Consensus 263 ~i~Ad~VVlA~G~~s~ 278 (549)
T 3nlc_A 263 EIKSRHVVLAVGHSAR 278 (549)
T ss_dssp EEECSCEEECCCTTCH
T ss_pred EEECCEEEECCCCChh
Confidence 9999999999999885
No 56
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.42 E-value=7.2e-11 Score=121.78 Aligned_cols=57 Identities=9% Similarity=0.095 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCC
Q 011835 191 HLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAAS 247 (476)
Q Consensus 191 ~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S 247 (476)
..|.+.|.+.+++.|++|+ +++|+.|..+++++++|++.||+++.||.||.+.+...
T Consensus 221 ~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~~~~~gV~~~~g~~~~ad~VV~~a~~~~ 278 (501)
T 4dgk_A 221 GALVQGMIKLFQDLGGEVVLNARVSHMETTGNKIEAVHLEDGRRFLTQAVASNADVVH 278 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSCEEECCC---
T ss_pred cchHHHHHHHHHHhCCceeeecceeEEEeeCCeEEEEEecCCcEEEcCEEEECCCHHH
Confidence 4577888888999999999 99999999999878889999999999999999887654
No 57
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.41 E-value=1.8e-12 Score=134.66 Aligned_cols=140 Identities=16% Similarity=0.217 Sum_probs=93.8
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCC-CCC-Cc-----cc----chHHHHhcCcchhhhhhcccceeee-
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLP-FTN-NY-----GV----WEDEFRDLGLEGCIEHVWRDTVVYI- 173 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~-~~~-~~-----G~----~~~~l~~~~~~~~~~~~~~~~~~~~- 173 (476)
..+||+|||||+||++||+.|++.|++|+|||+... ... .+ |+ ..+.++.++- ......+...+.+
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg--~~~~~~d~~gi~f~ 103 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGG--EMGKAIDQTGIQFK 103 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTC--SHHHHHHHHEEEEE
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhh--HHHHHhhhccccee
Confidence 358999999999999999999999999999998742 211 11 11 1222333321 0001111111111
Q ss_pred --C-CCCCEEeccCcceecHHHHHHHHHHHHHH-CCCeEEEEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCCC
Q 011835 174 --D-EDEPILIGRAYGRVSRHLLHEELLRRCVE-SGVSYLSSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASG 248 (476)
Q Consensus 174 --~-~~~~~~~~~~~~~i~r~~l~~~L~~~~~~-~gv~i~~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S~ 248 (476)
. ...+. .......+++..+...|.+.+++ .|+++++++|+++..+++.+.+|.+.+|.++.||.||+|||.++.
T Consensus 104 ~l~~~kGpa-v~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~~~~Vt~L~~e~g~V~GV~t~dG~~i~AdaVVLATG~~s~ 181 (637)
T 2zxi_A 104 MLNTRKGKA-VQSPRAQADKKRYREYMKKVCENQENLYIKQEEVVDIIVKNNQVVGVRTNLGVEYKTKAVVVTTGTFLN 181 (637)
T ss_dssp EESTTSCGG-GCEEEEEECHHHHHHHHHHHHHTCTTEEEEESCEEEEEESSSBEEEEEETTSCEEECSEEEECCTTCBT
T ss_pred ecccccCcc-ccchhhhCCHHHHHHHHHHHHHhCCCCEEEEeEEEEEEecCCEEEEEEECCCcEEEeCEEEEccCCCcc
Confidence 1 11000 00011247889999999999987 599999889999998777667888999989999999999998864
No 58
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.41 E-value=3.6e-12 Score=133.74 Aligned_cols=144 Identities=17% Similarity=0.225 Sum_probs=91.3
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCc-----cc---chHHHHhcCcchhhhh------------
Q 011835 105 NGILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNY-----GV---WEDEFRDLGLEGCIEH------------ 164 (476)
Q Consensus 105 ~~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~-----G~---~~~~l~~~~~~~~~~~------------ 164 (476)
...+||||||||+|||++|+.|++.|++|+||||......+. |+ .......+++......
T Consensus 124 ~~~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~ 203 (571)
T 1y0p_A 124 HDTVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAKKITDSPELMFEDTMKGGQNI 203 (571)
T ss_dssp SEECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhhcCceEEeCCCHHHHHhCCCCCHHHHHHHHHHhcCCC
Confidence 346899999999999999999999999999999976543221 11 1111222222110000
Q ss_pred -------h----------c-ccceeee-----CCCCC--EEeccCcceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEE
Q 011835 165 -------V----------W-RDTVVYI-----DEDEP--ILIGRAYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITE 218 (476)
Q Consensus 165 -------~----------~-~~~~~~~-----~~~~~--~~~~~~~~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~ 218 (476)
. | ....+.+ ..+.. ..+....+......+...|.+.+++.||+++ +++|+++..
T Consensus 204 ~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~g~~~g~~l~~~L~~~~~~~gv~i~~~~~v~~l~~ 283 (571)
T 1y0p_A 204 NDPALVKVLSSHSKDSVDWMTAMGADLTDVGMMGGASVNRAHRPTGGAGVGAHVVQVLYDNAVKRNIDLRMNTRGIEVLK 283 (571)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEEE
T ss_pred CCHHHHHHHHHccHHHHHHHHhcCCCCccCcccCCcCCCeeEecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEeeEeEE
Confidence 0 0 0000000 00000 0000011124567899999999999999999 999999998
Q ss_pred cC-CceEEEEec--Cce--EEECceEEEccCCCCC
Q 011835 219 ST-SGHRLVACE--HDM--IVPCRLATVASGAASG 248 (476)
Q Consensus 219 ~~-~~~~~v~~~--~g~--~i~a~~vV~A~G~~S~ 248 (476)
++ +.+++|.+. +|+ ++.||.||+|+|.++.
T Consensus 284 ~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~~ 318 (571)
T 1y0p_A 284 DDKGTVKGILVKGMYKGYYWVKADAVILATGGFAK 318 (571)
T ss_dssp CTTSCEEEEEEEETTTEEEEEECSEEEECCCCCTT
T ss_pred cCCCeEEEEEEEeCCCcEEEEECCeEEEeCCCccc
Confidence 76 545556554 564 7899999999999885
No 59
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.40 E-value=2.8e-12 Score=134.29 Aligned_cols=145 Identities=18% Similarity=0.225 Sum_probs=92.4
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCc-----ccc---hHHHHhcCcchh---------------
Q 011835 105 NGILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNY-----GVW---EDEFRDLGLEGC--------------- 161 (476)
Q Consensus 105 ~~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~-----G~~---~~~l~~~~~~~~--------------- 161 (476)
...+||||||||++||++|+.|++.|++|+||||......+. |++ .......++...
T Consensus 119 ~~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~s~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~~~~~ 198 (566)
T 1qo8_A 119 SETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAHGVEDKVEWFIEDAMKGGRQQ 198 (566)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccCceeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCC
Confidence 356899999999999999999999999999999976543221 111 111112222110
Q ss_pred -----hhhh---------c-ccceeeeC-----CCCC--EEeccCcceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEE
Q 011835 162 -----IEHV---------W-RDTVVYID-----EDEP--ILIGRAYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITE 218 (476)
Q Consensus 162 -----~~~~---------~-~~~~~~~~-----~~~~--~~~~~~~~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~ 218 (476)
+... | ....+.+. .+.. ..+....+.+....+...|.+.+++.||+++ +++|+++..
T Consensus 199 ~~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~l~~ 278 (566)
T 1qo8_A 199 NDIKLVTILAEQSADGVQWLESLGANLDDLKRSGGARVDRTHRPHGGKSSGPEIIDTLRKAAKEQGIDTRLNSRVVKLVV 278 (566)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEECSSSSCHHHHHHHHHHHHHHHTTCCEECSEEEEEEEE
T ss_pred CCHHHHHHHHhccHHHHHHHHhcCCccccccccCCCCCCceeecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEE
Confidence 0000 0 00000000 0000 0011111124577899999999999999999 999999998
Q ss_pred cC-CceEEEEec--Cce--EEECceEEEccCCCCCC
Q 011835 219 ST-SGHRLVACE--HDM--IVPCRLATVASGAASGK 249 (476)
Q Consensus 219 ~~-~~~~~v~~~--~g~--~i~a~~vV~A~G~~S~~ 249 (476)
++ +++++|.+. +|+ +++||.||+|+|.++..
T Consensus 279 ~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s~~ 314 (566)
T 1qo8_A 279 NDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYGMN 314 (566)
T ss_dssp CTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCTTC
T ss_pred CCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCcccC
Confidence 77 555556654 664 68999999999999953
No 60
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.40 E-value=8.3e-11 Score=118.57 Aligned_cols=56 Identities=16% Similarity=0.105 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCC
Q 011835 191 HLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAAS 247 (476)
Q Consensus 191 ~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S 247 (476)
..+.+.|.+.+++.|++|+ +++|++|..+++++..|.+. |++++||.||.|+|.+.
T Consensus 196 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~gv~~~-g~~~~ad~VV~a~~~~~ 252 (425)
T 3ka7_A 196 KGIIDALETVISANGGKIHTGQEVSKILIENGKAAGIIAD-DRIHDADLVISNLGHAA 252 (425)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEET-TEEEECSEEEECSCHHH
T ss_pred HHHHHHHHHHHHHcCCEEEECCceeEEEEECCEEEEEEEC-CEEEECCEEEECCCHHH
Confidence 4577788888889999999 99999999987755557765 77899999999999776
No 61
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.40 E-value=9.2e-12 Score=116.87 Aligned_cols=35 Identities=29% Similarity=0.373 Sum_probs=32.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPF 142 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~ 142 (476)
+||+|||||||||+||+.|+++|++|+||||....
T Consensus 3 ~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~ 37 (336)
T 3kkj_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGS 37 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 79999999999999999999999999999997654
No 62
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.39 E-value=1.3e-12 Score=124.54 Aligned_cols=124 Identities=17% Similarity=0.237 Sum_probs=85.0
Q ss_pred CcccEEEECCCHHHHHHHHHHHHc-CCcEEEECCCCCCCCCccc-------------chHHHHhcCcchhhhhhccccee
Q 011835 106 GILDLVVIGCGPAGLALAAESAKL-GLNVGLIGPDLPFTNNYGV-------------WEDEFRDLGLEGCIEHVWRDTVV 171 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~-G~~V~liE~~~~~~~~~G~-------------~~~~l~~~~~~~~~~~~~~~~~~ 171 (476)
..+||+|||||++|+++|+.|++. |++|+|||+.......... ..+.+..+++.
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~------------ 105 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVA------------ 105 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCC------------
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCC------------
Confidence 357999999999999999999997 9999999997654321100 01112222110
Q ss_pred eeCCCCCEEeccCcc-eecHHHHHHHHHHHHHH-CCCeEE-EEEEEEEEEcCCceEEEEec---------Cc-----eEE
Q 011835 172 YIDEDEPILIGRAYG-RVSRHLLHEELLRRCVE-SGVSYL-SSKVESITESTSGHRLVACE---------HD-----MIV 234 (476)
Q Consensus 172 ~~~~~~~~~~~~~~~-~i~r~~l~~~L~~~~~~-~gv~i~-~~~v~~i~~~~~~~~~v~~~---------~g-----~~i 234 (476)
+. ....+. ..+...+...|.+.+.+ .|++++ +++|+++..+++.+..|.+. ++ .++
T Consensus 106 -~~------~~~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i 178 (284)
T 1rp0_A 106 -YD------EQDTYVVVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVM 178 (284)
T ss_dssp -CE------ECSSEEEESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEE
T ss_pred -cc------cCCCEEEecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEE
Confidence 00 000011 12667788888888865 699999 99999999877644455543 22 679
Q ss_pred ECceEEEccCCCCC
Q 011835 235 PCRLATVASGAASG 248 (476)
Q Consensus 235 ~a~~vV~A~G~~S~ 248 (476)
+||.||+|+|.+|.
T Consensus 179 ~ad~VV~AtG~~s~ 192 (284)
T 1rp0_A 179 EAKIVVSSCGHDGP 192 (284)
T ss_dssp EEEEEEECCCSSST
T ss_pred ECCEEEECCCCchH
Confidence 99999999998874
No 63
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.39 E-value=6e-12 Score=123.32 Aligned_cols=274 Identities=13% Similarity=0.081 Sum_probs=135.5
Q ss_pred ccEEEECCCHHHHHHHHHHHH---cCCcEEEECCCCCCCCCcccc-----hHHHHhcCc-------------chhhh---
Q 011835 108 LDLVVIGCGPAGLALAAESAK---LGLNVGLIGPDLPFTNNYGVW-----EDEFRDLGL-------------EGCIE--- 163 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~---~G~~V~liE~~~~~~~~~G~~-----~~~l~~~~~-------------~~~~~--- 163 (476)
+||+|||||++|+++|+.|++ .|++|+||||........... .....+.+. ...+.
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~ 81 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQRFYDELL 81 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTHHHHHHHH
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHHHHHHHHH
Confidence 589999999999999999999 999999999976433211000 000000000 00000
Q ss_pred -----hhcccceeeeC-CCCCEEeccCcceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCceEEEC
Q 011835 164 -----HVWRDTVVYID-EDEPILIGRAYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPC 236 (476)
Q Consensus 164 -----~~~~~~~~~~~-~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a 236 (476)
..|........ ......+....+ + ..+.+.|.+. .|++++ +++|+++..+++ .+.|.+.+|+++.+
T Consensus 82 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~g-~--~~l~~~l~~~---~g~~i~~~~~V~~i~~~~~-~~~v~~~~g~~~~a 154 (342)
T 3qj4_A 82 AYGVLRPLSSPIEGMVMKEGDCNFVAPQG-I--SSIIKHYLKE---SGAEVYFRHRVTQINLRDD-KWEVSKQTGSPEQF 154 (342)
T ss_dssp HTTSCEECCSCEETCCC--CCEEEECTTC-T--THHHHHHHHH---HTCEEESSCCEEEEEECSS-SEEEEESSSCCEEE
T ss_pred hCCCeecCchhhcceeccCCccceecCCC-H--HHHHHHHHHh---cCCEEEeCCEEEEEEEcCC-EEEEEECCCCEEEc
Confidence 01110000000 000001110111 1 2233334333 489999 999999999877 57788888877899
Q ss_pred ceEEEccCCCC-CCccc-ccc--------CCCcccceeEEEEEEEeeCC-CCCCCceeeeccCCCCCCCccccCCCCCeE
Q 011835 237 RLATVASGAAS-GKLLE-YEV--------GGPKVSVQTAYGVEVEVENN-PYDPSLMVFMDYRDCTKQEVPSFESDNPTF 305 (476)
Q Consensus 237 ~~vV~A~G~~S-~~~~~-~~~--------~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (476)
|.||+|+.... ..++. ... ......+...+.+.+.++.. ..+.....+.. ...+..
T Consensus 155 d~vV~A~p~~~~~~ll~~~~~~l~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~g~~~-------------~~~~~~ 221 (342)
T 3qj4_A 155 DLIVLTMPVPEILQLQGDITTLISECQRQQLEAVSYSSRYALGLFYEAGTKIDVPWAGQYI-------------TSNPCI 221 (342)
T ss_dssp SEEEECSCHHHHTTCBSTHHHHSCHHHHHHHHTCCBCCEEEEEEECSSCC--CCSCSEEEC-------------SSCSSE
T ss_pred CEEEECCCHHHHHHHhcccccccCHHHHHHHhcCCccccEEEEEEECCCCccCCceeeEEc-------------cCCcce
Confidence 99999997432 12221 100 00122344555555554421 11111111110 011112
Q ss_pred EEEE-----Ec---C-CceEEEEeeccc---CCCCCChHHHHHHHHHHHHHcCCcccceeE--E-EEE-EeeCCCC--CC
Q 011835 306 LYVM-----PM---S-STRVFFEETCLA---SKDGLPFDILKKKLMARLERLGIQVLKTYE--E-EWS-YIPVGGS--LP 367 (476)
Q Consensus 306 ~~~~-----p~---~-~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~-~~~-~~p~~~~--~~ 367 (476)
.|++ |. . ++..++...... .....+.+++.+.+.+.+.++-....+... . .|. .+|-... .+
T Consensus 222 ~~~~~~~~k~~r~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~p~~~~v~rW~~a~p~~~~~~~~ 301 (342)
T 3qj4_A 222 RFVSIDNKKRNIESSEIGPSLVIHTTVPFGVTYLEHSIEDVQELVFQQLENILPGLPQPIATKCQKWRHSQVTNAAANCP 301 (342)
T ss_dssp EEEEEHHHHTTCCCC-CCCEEEEEECHHHHHHTTTSCHHHHHHHHHHHHHHHSCSCCCCSEEEEEEETTCSBSSCCSSSC
T ss_pred EEEEccccCCCCCCCCCCceEEEECCHHHHHHhhcCCHHHHHHHHHHHHHHhccCCCCCceeeeccccccccccccCCCc
Confidence 3332 11 0 111222221111 123456777888777777665222111111 1 121 1232221 11
Q ss_pred -----CCCCCeeEeccccCccCCcchHHHHHHHHhHHHHHHHHHH
Q 011835 368 -----NTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAY 407 (476)
Q Consensus 368 -----~~~~rv~liGDAAh~~~P~~G~G~~~Al~da~~la~~l~~ 407 (476)
...+++.+.||..+ |-|+.-++.+|..+|+.|..
T Consensus 302 ~~~~~~~~~~l~laGd~~~------g~~v~~ai~sg~~aa~~i~~ 340 (342)
T 3qj4_A 302 GQMTLHHKPFLACGGDGFT------QSNFDGCITSALCVLEALKN 340 (342)
T ss_dssp SCEEEETTTEEEECSGGGS------CSSHHHHHHHHHHHHHHHTT
T ss_pred ceeEecCCccEEEEccccC------CCCccHHHHHHHHHHHHHHh
Confidence 12368999999863 45899999999999988865
No 64
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.39 E-value=4e-12 Score=127.22 Aligned_cols=135 Identities=22% Similarity=0.210 Sum_probs=86.5
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCC--------c-----ccchH------------HHHhcCcchh
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNN--------Y-----GVWED------------EFRDLGLEGC 161 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~--------~-----G~~~~------------~l~~~~~~~~ 161 (476)
.+||+|||||++|+++|+.|++.|++|+|||+....... + +.... .+..+...+.
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 83 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWDF 83 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHHHH
T ss_pred CCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHHHH
Confidence 589999999999999999999999999999997644211 0 00000 0000000000
Q ss_pred hhhhcc-cceeeeCCCCCEEeccCcceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEc----CCceEEEEecCceEEE
Q 011835 162 IEHVWR-DTVVYIDEDEPILIGRAYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITES----TSGHRLVACEHDMIVP 235 (476)
Q Consensus 162 ~~~~~~-~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~----~~~~~~v~~~~g~~i~ 235 (476)
+...-. .......... ..+ +.. .+..+.+.|.+.+++.||+++ +++|+++..+ ++ .+.|.+.++ +++
T Consensus 84 ~~~~~~~Gi~~~~~~~g-~~~--p~~--~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~-~~~v~~~~g-~i~ 156 (401)
T 2gqf_A 84 ISLVAEQGITYHEKELG-QLF--CDE--GAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKV-RFVLQVNST-QWQ 156 (401)
T ss_dssp HHHHHHTTCCEEECSTT-EEE--ETT--CTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSC-CEEEEETTE-EEE
T ss_pred HHHHHhCCCceEECcCC-EEc--cCC--CHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCC-eEEEEECCC-EEE
Confidence 000000 0000000000 011 001 567788899999999999999 9999999876 44 467777776 799
Q ss_pred CceEEEccCCCCC
Q 011835 236 CRLATVASGAASG 248 (476)
Q Consensus 236 a~~vV~A~G~~S~ 248 (476)
||.||+|+|.+|.
T Consensus 157 ad~VVlAtG~~s~ 169 (401)
T 2gqf_A 157 CKNLIVATGGLSM 169 (401)
T ss_dssp ESEEEECCCCSSC
T ss_pred CCEEEECCCCccC
Confidence 9999999999984
No 65
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.38 E-value=1.5e-12 Score=125.40 Aligned_cols=113 Identities=18% Similarity=0.186 Sum_probs=79.7
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccC
Q 011835 105 NGILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRA 184 (476)
Q Consensus 105 ~~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (476)
++.|||+||||||||++||+.|+++|++|+|||+..+.+.-. ..+.. +. .
T Consensus 4 M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~~gg~~~-----------------~~~~~----~~---------~ 53 (304)
T 4fk1_A 4 MKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNTNRNRVT-----------------QNSHG----FI---------T 53 (304)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCGGGGS-----------------SCBCC----ST---------T
T ss_pred CCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCeee-----------------eecCC----cc---------C
Confidence 456999999999999999999999999999999865321100 00000 00 0
Q ss_pred cceecHHHHHHHHHHHHHHCC-CeEEEEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCC
Q 011835 185 YGRVSRHLLHEELLRRCVESG-VSYLSSKVESITESTSGHRLVACEHDMIVPCRLATVASGAAS 247 (476)
Q Consensus 185 ~~~i~r~~l~~~L~~~~~~~g-v~i~~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S 247 (476)
...+....+.+...+.+.+.+ +.++...++.+...+++...|.+.+|+++++|.||+|||+..
T Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~a~~liiATGs~p 117 (304)
T 4fk1_A 54 RDGIKPEEFKEIGLNEVMKYPSVHYYEKTVVMITKQSTGLFEIVTKDHTKYLAERVLLATGMQE 117 (304)
T ss_dssp CTTBCHHHHHHHHHHHHTTSTTEEEEECCEEEEEECTTSCEEEEETTCCEEEEEEEEECCCCEE
T ss_pred CCCCCHHHHHHHHHHHHHhcCCEEEEeeEEEEeeecCCCcEEEEECCCCEEEeCEEEEccCCcc
Confidence 012455666666667776655 445577788887766657888889999999999999999754
No 66
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.38 E-value=1.7e-12 Score=127.44 Aligned_cols=129 Identities=19% Similarity=0.215 Sum_probs=89.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcc
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYG 186 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (476)
.+||+|||||++|+++|+.|++.|++|+|||+....... |......+.+.. .... ..+... .. ......
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~---~~~~~~~~~~~~--~~~~----~~~~~~-~~-~~~~~~ 71 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGA---WQHAWHSLHLFS--PAGW----SSIPGW-PM-PASQGP 71 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGG---GGGSCTTCBCSS--CGGG----SCCSSS-CC-CCCSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCc---ccCCCCCcEecC--chhh----hhCCCC-CC-CCCccC
Confidence 479999999999999999999999999999998654422 221111110000 0000 000000 00 011112
Q ss_pred eecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEE-EEecCceEEECceEEEccCCCCC
Q 011835 187 RVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRL-VACEHDMIVPCRLATVASGAASG 248 (476)
Q Consensus 187 ~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~-v~~~~g~~i~a~~vV~A~G~~S~ 248 (476)
...+..+.+.|.+.+++.|++++ +++|++++.+++ .+. |.+.++ ++.+|.||+|+|.++.
T Consensus 72 ~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~-~~~~v~~~~g-~~~~d~vV~AtG~~~~ 133 (357)
T 4a9w_A 72 YPARAEVLAYLAQYEQKYALPVLRPIRVQRVSHFGE-RLRVVARDGR-QWLARAVISATGTWGE 133 (357)
T ss_dssp SCBHHHHHHHHHHHHHHTTCCEECSCCEEEEEEETT-EEEEEETTSC-EEEEEEEEECCCSGGG
T ss_pred CCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEECCC-cEEEEEeCCC-EEEeCEEEECCCCCCC
Confidence 35788899999999999999999 999999998877 566 888877 7999999999998764
No 67
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.37 E-value=2.6e-11 Score=123.80 Aligned_cols=186 Identities=11% Similarity=0.087 Sum_probs=96.1
Q ss_pred CeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCCCC-ccccccCC----CcccceeEEEEEEEeeCCCCCC
Q 011835 206 VSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGK-LLEYEVGG----PKVSVQTAYGVEVEVENNPYDP 279 (476)
Q Consensus 206 v~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S~~-~~~~~~~~----~~~~~~~~~g~~~~~~~~~~~~ 279 (476)
++|+ +++|++|+.+++ .+.|++.+|++++||.||+|+..+... +..-+ +. ....+.....+.+.++....+.
T Consensus 248 ~~i~~~~~V~~i~~~~~-~~~v~~~~g~~~~ad~vi~a~p~~~~~~l~~~~-~~~~~~~~~~~~~~~~v~l~~~~~~~~~ 325 (470)
T 3i6d_A 248 TKVYKGTKVTKLSHSGS-CYSLELDNGVTLDADSVIVTAPHKAAAGMLSEL-PAISHLKNMHSTSVANVALGFPEGSVQM 325 (470)
T ss_dssp EEEECSCCEEEEEECSS-SEEEEESSSCEEEESEEEECSCHHHHHHHTTTS-TTHHHHHTCEEEEEEEEEEEESSTTCCC
T ss_pred CEEEeCCceEEEEEcCC-eEEEEECCCCEEECCEEEECCCHHHHHHHcCCc-hhhHHHhcCCCCceEEEEEEECchhcCC
Confidence 6888 999999998877 578888999889999999999876521 11101 00 0113334444444454332211
Q ss_pred --CceeeeccCCCCCCCccccCCCCC--eEEEE---EEc--CCceEEE-EeecccC---CCCCChHHHHHHHHHHHHHcC
Q 011835 280 --SLMVFMDYRDCTKQEVPSFESDNP--TFLYV---MPM--SSTRVFF-EETCLAS---KDGLPFDILKKKLMARLERLG 346 (476)
Q Consensus 280 --~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~---~p~--~~~~~~~-~~~~~~~---~~~~~~~~~~~~l~~~~~~~~ 346 (476)
....++..... ... +..|. .|. .++...+ ....... ....+.+++.+.+.+.+.++-
T Consensus 326 ~~~~~g~l~~~~~----------~~~~~~~~~~s~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 395 (470)
T 3i6d_A 326 EHEGTGFVISRNS----------DFAITACTWTNKKWPHAAPEGKTLLRAYVGKAGDESIVDLSDNDIINIVLEDLKKVM 395 (470)
T ss_dssp SSCSSEEEECSTT----------CCSEEEEEEHHHHCGGGSCTTCEEEEEEECCSSCCGGGTSCHHHHHHHHHHHHGGGS
T ss_pred CCCCeEEEccCCC----------CCCceEEEEEcCcCCCcCCCCCEEEEEEECCCCCccccCCCHHHHHHHHHHHHHHHh
Confidence 11111111000 000 01111 010 1122111 1111111 123467788888888877752
Q ss_pred Cccccee---EEEEE-EeeCCCC--C-------C---CCCCCeeEeccccCccCCcchHHHHHHHHhHHHHHHHHHHHh
Q 011835 347 IQVLKTY---EEEWS-YIPVGGS--L-------P---NTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAYIL 409 (476)
Q Consensus 347 ~~~~~~~---~~~~~-~~p~~~~--~-------~---~~~~rv~liGDAAh~~~P~~G~G~~~Al~da~~la~~l~~~l 409 (476)
....... ...|. .+|.... . + ...+++.++||.. .|.|++.|+.+|..+|+.|.+.+
T Consensus 396 g~~~~p~~~~~~~w~~a~p~~~~g~~~~~~~~~~~l~~~~~~l~~aG~~~------~g~gv~~a~~sG~~aA~~i~~~l 468 (470)
T 3i6d_A 396 NINGEPEMTCVTRWHESMPQYHVGHKQRIKELREALASAYPGVYMTGASF------EGVGIPDCIDQGKAAVSDALTYL 468 (470)
T ss_dssp CCCSCCSEEEEEEEEEEEEECBTTHHHHHHHHHHHHHHHSTTEEECSTTT------SCCSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCceEEEEEEcCCccCCCCCCHHHHHHHHHHHHHhhCCCEEEEeecC------CCCCHHHHHHHHHHHHHHHHHHh
Confidence 2111211 12222 2232111 0 0 1236899999953 36689999999999999988764
No 68
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.36 E-value=3.7e-12 Score=123.09 Aligned_cols=124 Identities=15% Similarity=0.280 Sum_probs=83.4
Q ss_pred CcccEEEECCCHHHHHHHHHHHHc--CCcEEEECCCCCCCCC-cc--c----------chHHHHhcCcchhhhhhcccce
Q 011835 106 GILDLVVIGCGPAGLALAAESAKL--GLNVGLIGPDLPFTNN-YG--V----------WEDEFRDLGLEGCIEHVWRDTV 170 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~--G~~V~liE~~~~~~~~-~G--~----------~~~~l~~~~~~~~~~~~~~~~~ 170 (476)
..+||+||||||+||++|+.|+++ |++|+|||+....... +. . ....++.+++.
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~Gv~----------- 146 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVGVP----------- 146 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHHTCC-----------
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHcCCc-----------
Confidence 358999999999999999999998 9999999987654321 10 0 01111121110
Q ss_pred eeeCCCCCEEeccCcc-eecHHHHHHHHHHHHHH-CCCeEE-EEEEEEEEEcCC-------------------ceEEEEe
Q 011835 171 VYIDEDEPILIGRAYG-RVSRHLLHEELLRRCVE-SGVSYL-SSKVESITESTS-------------------GHRLVAC 228 (476)
Q Consensus 171 ~~~~~~~~~~~~~~~~-~i~r~~l~~~L~~~~~~-~gv~i~-~~~v~~i~~~~~-------------------~~~~v~~ 228 (476)
+... + .+. ..+...+.+.|.+.+.+ .|++++ ++.|+++..+++ .+.+|.+
T Consensus 147 --~~~~-----G-~~~~~~~~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~ 218 (344)
T 3jsk_A 147 --YEDE-----G-DYVVVKHAALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVT 218 (344)
T ss_dssp --CEEC-----S-SEEEESCHHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEE
T ss_pred --cccc-----C-CeEEEecHHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEe
Confidence 0000 1 111 12356788889998887 599999 999999987652 2444544
Q ss_pred c--------------CceEEECceEEEccCCCCC
Q 011835 229 E--------------HDMIVPCRLATVASGAASG 248 (476)
Q Consensus 229 ~--------------~g~~i~a~~vV~A~G~~S~ 248 (476)
. +..+|+|++||+|||..|.
T Consensus 219 ~~~~v~~~g~~~~~~d~~~i~Ak~VV~ATG~~s~ 252 (344)
T 3jsk_A 219 NWTLVSMHHDDQSAMDPNTINAPVIISTTGHDGP 252 (344)
T ss_dssp EEHHHHTTSSSSSCCBCEEEECSEEEECCCSSSS
T ss_pred eeeeeeccCCcccccCceEEEcCEEEECCCCCch
Confidence 2 2357999999999998774
No 69
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.35 E-value=4.2e-12 Score=125.27 Aligned_cols=118 Identities=17% Similarity=0.223 Sum_probs=88.5
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCc
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAY 185 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (476)
..+||+||||||+|+++|+.|++.|++|+|||+....... |... +.....+.. ..+
T Consensus 13 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~---~~~~-------------~~~~~~~~~--------~~~ 68 (360)
T 3ab1_A 13 DMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQ---LAAL-------------YPEKHIYDV--------AGF 68 (360)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHH---HHHT-------------CTTSEECCS--------TTC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCc---cccc-------------CCCcccccC--------CCC
Confidence 3589999999999999999999999999999997643211 1100 000000000 011
Q ss_pred ceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCC
Q 011835 186 GRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAAS 247 (476)
Q Consensus 186 ~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S 247 (476)
..+++..+.+.|.+.+.+.|++++ +++|+.++.++++.+.|.+.+|+++.+|.||+|+|.++
T Consensus 69 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~li~AtG~~~ 131 (360)
T 3ab1_A 69 PEVPAIDLVESLWAQAERYNPDVVLNETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAAGLGA 131 (360)
T ss_dssp SSEEHHHHHHHHHHHHHTTCCEEECSCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCTTCS
T ss_pred CCCCHHHHHHHHHHHHHHhCCEEEcCCEEEEEEECCCceEEEEECCCcEEEeeEEEEccCCCc
Confidence 135678888899999988899999 99999999876546788888888899999999999876
No 70
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.35 E-value=9.4e-11 Score=118.15 Aligned_cols=54 Identities=17% Similarity=0.118 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCC
Q 011835 191 HLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAAS 247 (476)
Q Consensus 191 ~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S 247 (476)
..+.+.|.+.+++.|++|+ +++|+++..+++ .+ | ..+|++++||.||.|+|.+.
T Consensus 189 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~-~v-V-~~~g~~~~ad~Vv~a~~~~~ 243 (421)
T 3nrn_A 189 KAVIDELERIIMENKGKILTRKEVVEINIEEK-KV-Y-TRDNEEYSFDVAISNVGVRE 243 (421)
T ss_dssp HHHHHHHHHHHHTTTCEEESSCCEEEEETTTT-EE-E-ETTCCEEECSEEEECSCHHH
T ss_pred HHHHHHHHHHHHHCCCEEEcCCeEEEEEEECC-EE-E-EeCCcEEEeCEEEECCCHHH
Confidence 3567778888888999999 999999998776 44 5 45777899999999999765
No 71
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.35 E-value=5.3e-12 Score=131.50 Aligned_cols=140 Identities=20% Similarity=0.265 Sum_probs=92.6
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCC-CCCC-c-----cc----chHHHHhcCcchhhhhhcccceeee-
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLP-FTNN-Y-----GV----WEDEFRDLGLEGCIEHVWRDTVVYI- 173 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~-~~~~-~-----G~----~~~~l~~~~~~~~~~~~~~~~~~~~- 173 (476)
..+||+|||||+||+++|+.|++.|.+|+|||+... .... + |+ ..+.+..++- .....++...+.+
T Consensus 20 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g--~~~~~~d~~gi~f~ 97 (641)
T 3cp8_A 20 HMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGG--EMGKAIDATGIQFR 97 (641)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTC--SHHHHHHHHEEEEE
T ss_pred CcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhccc--HHHHHHHhcCCchh
Confidence 458999999999999999999999999999998742 2111 1 11 1112222211 0111111111111
Q ss_pred ---CCCCCEEeccCcceecHHHHHHHHHHHHHH-CCCeEEEEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCCC
Q 011835 174 ---DEDEPILIGRAYGRVSRHLLHEELLRRCVE-SGVSYLSSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASG 248 (476)
Q Consensus 174 ---~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~-~gv~i~~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S~ 248 (476)
....+. ...+...+++..+...|.+.+++ .|++++++.|+++..+++++.+|.+.+|.++.||.||+|||.++.
T Consensus 98 ~l~~~kgpa-v~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~~~V~~L~~d~g~V~GV~t~~G~~i~Ad~VVLATG~~s~ 175 (641)
T 3cp8_A 98 MLNRSKGPA-MHSPRAQADKTQYSLYMRRIVEHEPNIDLLQDTVIGVSANSGKFSSVTVRSGRAIQAKAAILACGTFLN 175 (641)
T ss_dssp EECSSSCTT-TCEEEEEECHHHHHHHHHHHHHTCTTEEEEECCEEEEEEETTEEEEEEETTSCEEEEEEEEECCTTCBT
T ss_pred hcccccCcc-ccchhhhcCHHHHHHHHHHHHHhCCCCEEEeeEEEEEEecCCEEEEEEECCCcEEEeCEEEECcCCCCC
Confidence 111000 00111257899999999999987 499999779999988777556688888989999999999999875
No 72
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.34 E-value=4.5e-12 Score=122.39 Aligned_cols=119 Identities=18% Similarity=0.202 Sum_probs=83.6
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCc
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAY 185 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (476)
+.|||+||||||||++||+.|++.|++|+|||+...... ++.+++.... .+. + ..+.+.
T Consensus 3 ~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~------------~~~G~~~~~~---~i~-~-----~~g~~~ 61 (314)
T 4a5l_A 3 NIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGV------------AAGGQLTTTT---IIE-N-----FPGFPN 61 (314)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGC------------CTTCGGGGSS---EEC-C-----STTCTT
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCc------------ccCCCcCChH---Hhh-h-----ccCCcc
Confidence 358999999999999999999999999999998653211 1111111100 000 0 001111
Q ss_pred ceecHHHHHHHHHHHHHHCCCeEEEEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCC
Q 011835 186 GRVSRHLLHEELLRRCVESGVSYLSSKVESITESTSGHRLVACEHDMIVPCRLATVASGAAS 247 (476)
Q Consensus 186 ~~i~r~~l~~~L~~~~~~~gv~i~~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S 247 (476)
.++...|...+.+.+.+.++++....+.......+ ...+.+.++.++.+|.||+|||+..
T Consensus 62 -~i~~~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~~~liiATG~~~ 121 (314)
T 4a5l_A 62 -GIDGNELMMNMRTQSEKYGTTIITETIDHVDFSTQ-PFKLFTEEGKEVLTKSVIIATGATA 121 (314)
T ss_dssp -CEEHHHHHHHHHHHHHHTTCEEECCCEEEEECSSS-SEEEEETTCCEEEEEEEEECCCEEE
T ss_pred -cCCHHHHHHHHHHHHhhcCcEEEEeEEEEeecCCC-ceEEEECCCeEEEEeEEEEcccccc
Confidence 25677788888888999999988666777766655 4566677888999999999999754
No 73
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.33 E-value=2.5e-11 Score=127.12 Aligned_cols=143 Identities=20% Similarity=0.210 Sum_probs=88.4
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCc-----ccc----------------hHHHHhc---C--c-
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNY-----GVW----------------EDEFRDL---G--L- 158 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~-----G~~----------------~~~l~~~---~--~- 158 (476)
..+||+|||+|++||++|+.|++.|++|+|||+........ |++ ...+..+ + +
T Consensus 125 ~~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~~~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~ 204 (572)
T 1d4d_A 125 ETTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGIEDKKQIMIDDTMKGGRNIN 204 (572)
T ss_dssp EECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTGGGCCSCEECCSSSTTGGGTCCCCTHHHHHHHHHHTTTCS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcchhhhCCeeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCC
Confidence 46899999999999999999999999999999976443211 110 0000000 1 0
Q ss_pred -chhhhh---------hc-ccceeeeC-----CCCC--EEeccCcceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEc
Q 011835 159 -EGCIEH---------VW-RDTVVYID-----EDEP--ILIGRAYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITES 219 (476)
Q Consensus 159 -~~~~~~---------~~-~~~~~~~~-----~~~~--~~~~~~~~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~ 219 (476)
...+.. .| ....+.+. .+.. ..+....+......+...|.+.+++.||+++ +++|+++..+
T Consensus 205 ~~~~v~~~~~~~~~~i~~l~~~Gv~~~~~~~~gg~~~~r~~~~~~~~~~g~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~ 284 (572)
T 1d4d_A 205 DPELVKVLANNSSDSIDWLTSMGADMTDVGRMGGASVNRSHRPTGGAGVGAHVAQVLWDNAVKRGTDIRLNSRVVRILED 284 (572)
T ss_dssp CHHHHHHHHHTHHHHHHHHHHHTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEEEC
T ss_pred CHHHHHHHHHccHHHHHHHHhcCCccccccccCCCcCCeeEecCCCCCCHHHHHHHHHHHHHHcCCeEEecCEEEEEEEC
Confidence 000000 00 00000000 0100 0000111123467789999999999999999 9999999877
Q ss_pred C-CceEEEEec--Cce--EEECceEEEccCCCCC
Q 011835 220 T-SGHRLVACE--HDM--IVPCRLATVASGAASG 248 (476)
Q Consensus 220 ~-~~~~~v~~~--~g~--~i~a~~vV~A~G~~S~ 248 (476)
+ +.+++|.+. +|+ ++.||.||+|+|.++.
T Consensus 285 ~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~~ 318 (572)
T 1d4d_A 285 ASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFAK 318 (572)
T ss_dssp --CCEEEEEEEETTTEEEEEECSEEEECCCCCTT
T ss_pred CCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCcc
Confidence 6 545666654 564 6899999999999885
No 74
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.33 E-value=4.2e-12 Score=123.87 Aligned_cols=117 Identities=15% Similarity=0.243 Sum_probs=87.2
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCc
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAY 185 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (476)
..+||+||||||||+++|+.|++.|++|+|||+....... |... ++....+.. ..+
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~---~~~~-------------~~~~~~~~~--------~~~ 59 (335)
T 2zbw_A 4 DHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQ---LTAL-------------YPEKYIYDV--------AGF 59 (335)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHH---HHHT-------------CTTSEECCS--------TTC
T ss_pred CcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCe---eecc-------------CCCceeecc--------CCC
Confidence 4589999999999999999999999999999997643211 1100 000000000 011
Q ss_pred ceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCC
Q 011835 186 GRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAAS 247 (476)
Q Consensus 186 ~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S 247 (476)
..+.+..+.+.|.+.+.+.+++++ +++|+.++.+++ .+.|.+.+|.++.+|.||+|+|.++
T Consensus 60 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~-~~~v~~~~g~~~~~~~lv~AtG~~~ 121 (335)
T 2zbw_A 60 PKVYAKDLVKGLVEQVAPFNPVYSLGERAETLEREGD-LFKVTTSQGNAYTAKAVIIAAGVGA 121 (335)
T ss_dssp SSEEHHHHHHHHHHHHGGGCCEEEESCCEEEEEEETT-EEEEEETTSCEEEEEEEEECCTTSE
T ss_pred CCCCHHHHHHHHHHHHHHcCCEEEeCCEEEEEEECCC-EEEEEECCCCEEEeCEEEECCCCCC
Confidence 135677788888888888899998 999999998776 6778888888899999999999865
No 75
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.31 E-value=5.7e-12 Score=120.48 Aligned_cols=109 Identities=15% Similarity=0.107 Sum_probs=84.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcce
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (476)
+||+||||||+|+++|..|++.|++|+|||+.......... ...+ .....
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~~~---------------------~~~~---------~~~~~ 52 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFASH---------------------SHGF---------LGQDG 52 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGCSC---------------------CCSS---------TTCTT
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccchh---------------------hcCC---------cCCCC
Confidence 79999999999999999999999999999986532110000 0000 00113
Q ss_pred ecHHHHHHHHHHHHHHC-CCeEEEEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCC
Q 011835 188 VSRHLLHEELLRRCVES-GVSYLSSKVESITESTSGHRLVACEHDMIVPCRLATVASGAAS 247 (476)
Q Consensus 188 i~r~~l~~~L~~~~~~~-gv~i~~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S 247 (476)
.....+...+.+.+.+. ++++++++|++++.+++ .+.|.+.+++++.+|.||+|+|..+
T Consensus 53 ~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i~~~~~-~~~v~~~~g~~~~~d~vviAtG~~~ 112 (297)
T 3fbs_A 53 KAPGEIIAEARRQIERYPTIHWVEGRVTDAKGSFG-EFIVEIDGGRRETAGRLILAMGVTD 112 (297)
T ss_dssp CCHHHHHHHHHHHHTTCTTEEEEESCEEEEEEETT-EEEEEETTSCEEEEEEEEECCCCEE
T ss_pred CCHHHHHHHHHHHHHhcCCeEEEEeEEEEEEEcCC-eEEEEECCCCEEEcCEEEECCCCCC
Confidence 56778888888888776 78888779999998876 6788888888899999999999865
No 76
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=99.30 E-value=1.9e-11 Score=117.46 Aligned_cols=136 Identities=14% Similarity=0.203 Sum_probs=82.5
Q ss_pred CcccEEEECCCHHHHHHHHHHHHc--CCcEEEECCCCCCCC-CcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEec
Q 011835 106 GILDLVVIGCGPAGLALAAESAKL--GLNVGLIGPDLPFTN-NYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIG 182 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~--G~~V~liE~~~~~~~-~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (476)
..+||+||||||+|+++|+.|++. |++|+|+|+...... .+.. ...+....+.......+....+.+.......
T Consensus 64 ~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~-g~~~~~~~~~~~~~~~L~~~Gv~~~~~g~~~-- 140 (326)
T 2gjc_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLG-GQLFSAMVMRKPAHLFLQELEIPYEDEGDYV-- 140 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCC-GGGCCCEEEETTTHHHHHHTTCCCEECSSEE--
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCcccccccccc-CcccchhhhhhHHHHHHHhhCcccccCCCeE--
Confidence 457999999999999999999999 999999999765432 1100 0000000011000011111111110001111
Q ss_pred cCcceecHHHHHHHHHHHHHHC-CCeEE-EEEEEEEEEcC----C--ceEEEEec--------------CceEEEC----
Q 011835 183 RAYGRVSRHLLHEELLRRCVES-GVSYL-SSKVESITEST----S--GHRLVACE--------------HDMIVPC---- 236 (476)
Q Consensus 183 ~~~~~i~r~~l~~~L~~~~~~~-gv~i~-~~~v~~i~~~~----~--~~~~v~~~--------------~g~~i~a---- 236 (476)
...+...+...|.+.+.+. |++++ +++|+++..++ + .+.+|.+. ++.++.|
T Consensus 141 ---~~~~~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~d~~~I~A~G~~ 217 (326)
T 2gjc_A 141 ---VVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIELAGYK 217 (326)
T ss_dssp ---EESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCCCCEEEEESCCC
T ss_pred ---EEcchHHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecceeecccccceeccCceEEEEeecc
Confidence 1124567888899988774 99999 99999998873 2 35555542 3357888
Q ss_pred -----------ceEEEccCCCC
Q 011835 237 -----------RLATVASGAAS 247 (476)
Q Consensus 237 -----------~~vV~A~G~~S 247 (476)
++||+|||..+
T Consensus 218 ~~~~~~~~~~~~~VV~ATG~~~ 239 (326)
T 2gjc_A 218 NDGTRDLSQKHGVILSTTGHDG 239 (326)
T ss_dssp SSSCCCSSTTCCEEEECCCCC-
T ss_pred ccccccccccCCEEEECcCCCc
Confidence 99999999655
No 77
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.28 E-value=1.8e-11 Score=118.94 Aligned_cols=116 Identities=16% Similarity=0.248 Sum_probs=87.6
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcc
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYG 186 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (476)
.+||+|||||+||+++|+.|++.|++|+|||+...... .|.. .+.....+. -..+.
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG---~~~~-------------~~~~~~~~~--------~~~~~ 62 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGG---QLSA-------------LYPEKYIYD--------VAGFP 62 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCH---HHHH-------------HCTTSEECC--------STTCS
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCc---eehh-------------cCCCceEec--------cCCCC
Confidence 47999999999999999999999999999999764331 1110 011111100 01111
Q ss_pred eecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCC
Q 011835 187 RVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAAS 247 (476)
Q Consensus 187 ~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S 247 (476)
.+.+..+...+.+.+.+.|++++ +++|++++.++++.+.|.+.+|+ +.+|.||+|+|..+
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~-~~~d~vVlAtG~~~ 123 (332)
T 3lzw_A 63 KIRAQELINNLKEQMAKFDQTICLEQAVESVEKQADGVFKLVTNEET-HYSKTVIITAGNGA 123 (332)
T ss_dssp SEEHHHHHHHHHHHHTTSCCEEECSCCEEEEEECTTSCEEEEESSEE-EEEEEEEECCTTSC
T ss_pred CCCHHHHHHHHHHHHHHhCCcEEccCEEEEEEECCCCcEEEEECCCE-EEeCEEEECCCCCc
Confidence 35678899999999988999999 99999999887656788888876 99999999999854
No 78
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.27 E-value=1.3e-11 Score=119.88 Aligned_cols=115 Identities=16% Similarity=0.176 Sum_probs=83.6
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCc
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAY 185 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (476)
..+||+||||||+|+++|+.|++.|++|+|||+.. .+..+ .. ...+ ..++ +.+.
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~gg~~---~~---~~~~------------~~~~-------~~~~ 60 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKGM-PGGQI---AW---SEEV------------ENFP-------GFPE 60 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTGGG---GG---CSCB------------CCST-------TCSS
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCCC-CCccc---cc---cccc------------ccCC-------CCCC
Confidence 45899999999999999999999999999999973 21111 00 0000 0000 0011
Q ss_pred ceecHHHHHHHHHHHHHHCCCeEEEEEEEEEEEc--CCceEEEEecCceEEECceEEEccCCCC
Q 011835 186 GRVSRHLLHEELLRRCVESGVSYLSSKVESITES--TSGHRLVACEHDMIVPCRLATVASGAAS 247 (476)
Q Consensus 186 ~~i~r~~l~~~L~~~~~~~gv~i~~~~v~~i~~~--~~~~~~v~~~~g~~i~a~~vV~A~G~~S 247 (476)
.+++..+.+.+.+.+.+.|++++.++|++++.+ ++..+.|.+.+|.++.+|.||+|+|..+
T Consensus 61 -~~~~~~~~~~l~~~~~~~gv~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~ 123 (325)
T 2q7v_A 61 -PIAGMELAQRMHQQAEKFGAKVEMDEVQGVQHDATSHPYPFTVRGYNGEYRAKAVILATGADP 123 (325)
T ss_dssp -CBCHHHHHHHHHHHHHHTTCEEEECCEEEEEECTTSSSCCEEEEESSCEEEEEEEEECCCEEE
T ss_pred -CCCHHHHHHHHHHHHHHcCCEEEeeeEEEEEeccCCCceEEEEECCCCEEEeCEEEECcCCCc
Confidence 256778888889999999999987789999886 4422566677888899999999999865
No 79
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.26 E-value=1.7e-11 Score=118.25 Aligned_cols=113 Identities=21% Similarity=0.345 Sum_probs=84.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCC-cEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcc
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGL-NVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYG 186 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~-~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (476)
+||+||||||+|+++|+.|++.|+ +|+|||+... . |.+... .....++ +.+ .
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~~~-g---g~~~~~---------------~~~~~~~-------~~~-~ 54 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGMP-G---GQITGS---------------SEIENYP-------GVK-E 54 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSSST-T---CGGGGC---------------SCBCCST-------TCC-S
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCCCC-C---cccccc---------------cccccCC-------CCc-c
Confidence 699999999999999999999999 9999998531 1 111000 0000000 001 1
Q ss_pred eecHHHHHHHHHHHHHHCCCeEEEEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCCC
Q 011835 187 RVSRHLLHEELLRRCVESGVSYLSSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASG 248 (476)
Q Consensus 187 ~i~r~~l~~~L~~~~~~~gv~i~~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S~ 248 (476)
.+++..+.+.+.+.+.+.|++++.++|++++.+++ .+.|.+.+|.++++|.||+|+|+++.
T Consensus 55 ~~~~~~~~~~l~~~~~~~~v~~~~~~v~~i~~~~~-~~~v~~~~g~~~~~~~vv~AtG~~~~ 115 (311)
T 2q0l_A 55 VVSGLDFMQPWQEQCFRFGLKHEMTAVQRVSKKDS-HFVILAEDGKTFEAKSVIIATGGSPK 115 (311)
T ss_dssp CBCHHHHHHHHHHHHHTTSCEEECSCEEEEEEETT-EEEEEETTSCEEEEEEEEECCCEEEC
T ss_pred cCCHHHHHHHHHHHHHHcCCEEEEEEEEEEEEcCC-EEEEEEcCCCEEECCEEEECCCCCCC
Confidence 36788889999998988999988678999988766 56777788888999999999997663
No 80
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.26 E-value=3.9e-11 Score=116.02 Aligned_cols=111 Identities=17% Similarity=0.159 Sum_probs=83.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcc
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYG 186 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (476)
.+||+|||||+||+++|+.|++.|++|+|||+. .+..+ .. ....... ..+.
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~gg~~---~~---------------~~~~~~~---------~~~~ 65 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGGQL---TE---------------AGIVDDY---------LGLI 65 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--TTGGG---GG---------------CCEECCS---------TTST
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--CCCee---cc---------------ccccccc---------CCCC
Confidence 589999999999999999999999999999997 11111 10 0000000 0111
Q ss_pred eecHHHHHHHHHHHHHHCCCeEEEEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCC
Q 011835 187 RVSRHLLHEELLRRCVESGVSYLSSKVESITESTSGHRLVACEHDMIVPCRLATVASGAAS 247 (476)
Q Consensus 187 ~i~r~~l~~~L~~~~~~~gv~i~~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S 247 (476)
.+....+.+.+.+.+.+.|++++.++|++++.+++ .+.+.+.++.++.+|.||+|+|...
T Consensus 66 ~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i~~~~~-~~~v~~~~g~~~~~d~lvlAtG~~~ 125 (323)
T 3f8d_A 66 EIQASDMIKVFNKHIEKYEVPVLLDIVEKIENRGD-EFVVKTKRKGEFKADSVILGIGVKR 125 (323)
T ss_dssp TEEHHHHHHHHHHHHHTTTCCEEESCEEEEEEC---CEEEEESSSCEEEEEEEEECCCCEE
T ss_pred CCCHHHHHHHHHHHHHHcCCEEEEEEEEEEEecCC-EEEEEECCCCEEEcCEEEECcCCCC
Confidence 25678888999999999999988889999988766 6778888888899999999999874
No 81
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=99.25 E-value=2.4e-11 Score=117.28 Aligned_cols=112 Identities=17% Similarity=0.248 Sum_probs=74.9
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccC
Q 011835 105 NGILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRA 184 (476)
Q Consensus 105 ~~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (476)
+.+|||+||||||||++||+.|++.|++|+|||+..+.+ .+ +. ..++.. + +.
T Consensus 4 e~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~~gG-~~------~~----~~~i~~--------~---------p~ 55 (312)
T 4gcm_A 4 EIDFDIAIIGAGPAGMTAAVYASRANLKTVMIERGIPGG-QM------AN----TEEVEN--------F---------PG 55 (312)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTG-GG------GG----CSCBCC--------S---------TT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCC-ee------ec----ccccCC--------c---------CC
Confidence 456999999999999999999999999999999865321 10 00 001100 0 01
Q ss_pred cceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCC
Q 011835 185 YGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAAS 247 (476)
Q Consensus 185 ~~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S 247 (476)
+..+...++.........+.++.+. +..+........ .+...+++++++|.||+|||+..
T Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~d~liiAtGs~~ 116 (312)
T 4gcm_A 56 FEMITGPDLSTKMFEHAKKFGAVYQYGDIKSVEDKGEY---KVINFGNKELTAKAVIIATGAEY 116 (312)
T ss_dssp CSSBCHHHHHHHHHHHHHHTTCEEEECCCCEEEECSSC---EEEECSSCEEEEEEEEECCCEEE
T ss_pred ccccchHHHHHHHHHHHhhccccccceeeeeeeeeecc---eeeccCCeEEEeceeEEcccCcc
Confidence 1235566677777777777787777 555544443332 34445677899999999999654
No 82
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.25 E-value=2e-11 Score=118.95 Aligned_cols=118 Identities=16% Similarity=0.136 Sum_probs=84.7
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcc-cchHHHHhcCcchhhhhhcccceeeeCCCCCEEecc
Q 011835 105 NGILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYG-VWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGR 183 (476)
Q Consensus 105 ~~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (476)
...+||+||||||+|+++|+.|++.|++|+|||+........| .+... . ....++ +.
T Consensus 20 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~-------------~--~~~~~~-------~~ 77 (338)
T 3itj_A 20 HVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTT-------------T--EIENFP-------GF 77 (338)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGS-------------S--EECCST-------TC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccc-------------h--hhcccC-------CC
Confidence 4568999999999999999999999999999999652222221 11000 0 000000 00
Q ss_pred CcceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEe---cCceEEECceEEEccCCCC
Q 011835 184 AYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVAC---EHDMIVPCRLATVASGAAS 247 (476)
Q Consensus 184 ~~~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~---~~g~~i~a~~vV~A~G~~S 247 (476)
+ ..+.+..+...+.+.+.+.|++++ ++ |++++.+++ .+.+.+ .++.++.+|.||+|+|..+
T Consensus 78 ~-~~~~~~~~~~~~~~~~~~~gv~i~~~~-v~~i~~~~~-~~~v~~~~~~~~~~~~~d~vvlAtG~~~ 142 (338)
T 3itj_A 78 P-DGLTGSELMDRMREQSTKFGTEIITET-VSKVDLSSK-PFKLWTEFNEDAEPVTTDAIILATGASA 142 (338)
T ss_dssp T-TCEEHHHHHHHHHHHHHHTTCEEECSC-EEEEECSSS-SEEEEETTCSSSCCEEEEEEEECCCEEE
T ss_pred c-ccCCHHHHHHHHHHHHHHcCCEEEEeE-EEEEEEcCC-EEEEEEEecCCCcEEEeCEEEECcCCCc
Confidence 1 126778899999999999999999 76 999988766 566666 3667899999999999865
No 83
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.25 E-value=3.7e-11 Score=124.24 Aligned_cols=57 Identities=18% Similarity=0.226 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHHCCCeEE-EEEEEEEEEc-CCceEEEEecC-c--eEEECc-eEEEccCCCCC
Q 011835 192 LLHEELLRRCVESGVSYL-SSKVESITES-TSGHRLVACEH-D--MIVPCR-LATVASGAASG 248 (476)
Q Consensus 192 ~l~~~L~~~~~~~gv~i~-~~~v~~i~~~-~~~~~~v~~~~-g--~~i~a~-~vV~A~G~~S~ 248 (476)
.+...|.+.+++.|++++ +++|+++..+ ++.+++|.+.+ + .+++|| .||+|+|.++.
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~~ 265 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGSFAY 265 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCCCTT
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCChhh
Confidence 789999999999999999 9999999987 45466666543 3 268995 99999999983
No 84
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.24 E-value=3.1e-11 Score=125.30 Aligned_cols=137 Identities=18% Similarity=0.077 Sum_probs=90.8
Q ss_pred CcccEEEECCCHHHHHHHHHHH-HcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccC
Q 011835 106 GILDLVVIGCGPAGLALAAESA-KLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRA 184 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La-~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (476)
..+||+|||||++|+++|+.|+ +.|++|+|||+....+..| ... .--++.-.++..... ..+.......+...
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw---~~~-~ypg~~~d~~s~~~~--~~~~~~~~~~~~~~ 80 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTW---YWN-RYPGALSDTESHLYR--FSFDRDLLQESTWK 80 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHH---HHC-CCTTCEEEEEGGGSS--CCSCHHHHHHCCCS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcc---ccc-CCCCceecCCcceee--eccccccccCCCCc
Confidence 4589999999999999999999 9999999999976544221 100 000000000000000 00000000000111
Q ss_pred cceecHHHHHHHHHHHHHHCCC--eEE-EEEEEEEEEcCC-ceEEEEecCceEEECceEEEccCCCCC
Q 011835 185 YGRVSRHLLHEELLRRCVESGV--SYL-SSKVESITESTS-GHRLVACEHDMIVPCRLATVASGAASG 248 (476)
Q Consensus 185 ~~~i~r~~l~~~L~~~~~~~gv--~i~-~~~v~~i~~~~~-~~~~v~~~~g~~i~a~~vV~A~G~~S~ 248 (476)
....++..+.+.+.+.+++.|+ .++ +++|++++.+++ +.+.|.+.+|+++++|.||+|+|.+|.
T Consensus 81 ~~~~~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s~ 148 (540)
T 3gwf_A 81 TTYITQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLSA 148 (540)
T ss_dssp BSEEEHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSCCS
T ss_pred ccCCCHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCccccc
Confidence 1246788899999999999998 788 999999988755 478899999989999999999998774
No 85
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.24 E-value=1e-11 Score=121.02 Aligned_cols=118 Identities=16% Similarity=0.126 Sum_probs=82.8
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCc
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAY 185 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (476)
..+||+||||||+|+++|+.|++.|++|+|||+........|-. +.. .......+ +.+.
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~------------~~~--~~~~~~~~-------~~~~ 65 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQ------------LTT--TTDVENFP-------GFPE 65 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCG------------GGG--CSEECCST-------TCTT
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCce------------eee--ccccccCC-------CCcc
Confidence 35799999999999999999999999999999832211111100 000 00000000 0111
Q ss_pred ceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCCC
Q 011835 186 GRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASG 248 (476)
Q Consensus 186 ~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S~ 248 (476)
.+++..+...|.+.+.+.|++++ ++ |++++.+++ .+.|.+ ++.++++|.||+|+|.++.
T Consensus 66 -~~~~~~~~~~l~~~~~~~gv~~~~~~-v~~i~~~~~-~~~v~~-~~~~~~~~~vv~A~G~~~~ 125 (333)
T 1vdc_A 66 -GILGVELTDKFRKQSERFGTTIFTET-VTKVDFSSK-PFKLFT-DSKAILADAVILAIGAVAK 125 (333)
T ss_dssp -CEEHHHHHHHHHHHHHHTTCEEECCC-CCEEECSSS-SEEEEC-SSEEEEEEEEEECCCEEEC
T ss_pred -CCCHHHHHHHHHHHHHHCCCEEEEeE-EEEEEEcCC-EEEEEE-CCcEEEcCEEEECCCCCcC
Confidence 25677888899999999999999 65 999987665 466766 7788999999999998763
No 86
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.23 E-value=4.8e-11 Score=121.32 Aligned_cols=140 Identities=14% Similarity=0.067 Sum_probs=87.9
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCC--cEEEECCCCCCCCCcccchHHHHhcCcch--------h----------hhhh
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLGL--NVGLIGPDLPFTNNYGVWEDEFRDLGLEG--------C----------IEHV 165 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G~--~V~liE~~~~~~~~~G~~~~~l~~~~~~~--------~----------~~~~ 165 (476)
..+||+||||||+||++|..|++.|+ +|+|||+....+..|......-..+.+.. . ....
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~~~ 84 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSPL 84 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCCCC
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccCch
Confidence 35799999999999999999999999 99999997654322211000000000000 0 0000
Q ss_pred cccce-------eeeCCCCCEEeccCcceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecC---ce--
Q 011835 166 WRDTV-------VYIDEDEPILIGRAYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEH---DM-- 232 (476)
Q Consensus 166 ~~~~~-------~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~---g~-- 232 (476)
+.... ..+... ... .......++..+.+.|.+.+++.++.++ +++|++++.+++ .+.|++.+ |+
T Consensus 85 ~~~l~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~-~~~V~~~~~~~G~~~ 161 (447)
T 2gv8_A 85 YRDLQTNTPIELMGYCDQ-SFK-PQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDG-SWVVTYKGTKAGSPI 161 (447)
T ss_dssp CTTCBCSSCHHHHSCTTC-CCC-TTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETT-EEEEEEEESSTTCCE
T ss_pred hhhhccCCCHHHhccCCC-CCC-CCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCC-eEEEEEeecCCCCee
Confidence 00000 000000 000 0001135788899999998887788898 999999988766 56777665 65
Q ss_pred -EEECceEEEccCCCCC
Q 011835 233 -IVPCRLATVASGAASG 248 (476)
Q Consensus 233 -~i~a~~vV~A~G~~S~ 248 (476)
++.+|.||+|+|.+|.
T Consensus 162 ~~~~~d~VVvAtG~~s~ 178 (447)
T 2gv8_A 162 SKDIFDAVSICNGHYEV 178 (447)
T ss_dssp EEEEESEEEECCCSSSS
T ss_pred EEEEeCEEEECCCCCCC
Confidence 7999999999999874
No 87
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.22 E-value=1.4e-10 Score=118.89 Aligned_cols=55 Identities=22% Similarity=0.209 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCC
Q 011835 192 LLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAAS 247 (476)
Q Consensus 192 ~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S 247 (476)
.|.+.|.+.+.+.|++|+ +++|++|..++++.+.|.+ ++.++.||.||+|++.+.
T Consensus 235 ~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~~~~v~~-~~~~~~ad~vv~a~p~~~ 290 (477)
T 3nks_A 235 MLPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSL-RDSSLEADHVISAIPASV 290 (477)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCCCEEEECGGGCEEEEC-SSCEEEESEEEECSCHHH
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCceEEEEE-CCeEEEcCEEEECCCHHH
Confidence 367777888888899999 9999999987765477766 445799999999998765
No 88
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=99.22 E-value=1.3e-12 Score=132.93 Aligned_cols=150 Identities=18% Similarity=0.177 Sum_probs=95.1
Q ss_pred CccceeeecccCCCCcccccccc-ccchhcCCcceeeeccccCcchhhhhhhccCCCCCCCCCCcccEEEECCCHHHHHH
Q 011835 44 SYKVTARATSNNAGSESCVAVKE-EDYIKAGGSQLVFVQMQQNKSMDKQSKLADKLPPISIGNGILDLVVIGCGPAGLAL 122 (476)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dVvIIGgG~aGl~~ 122 (476)
.|+||++..|+. +|++... +++|.++..+.+..+...... .....++. ....+||+|||||||||++
T Consensus 70 grvCp~~~~Ce~----~C~~~~~~~~~v~I~~le~~~~~~~~~~~------~~~~~~~~--~~~~~~V~IIGgGpAGl~a 137 (456)
T 2vdc_G 70 GRICPQDRLCEG----NCVIEQSTHGAVTIGSVEKYINDTAWDQG------WVKPRTPS--RELGLSVGVIGAGPAGLAA 137 (456)
T ss_dssp HHHCCGGGSGGG----GCGGGGSSSCSCCHHHHHHHHHHHHHHHT------CCCCCCSC--SSCCCCEEEECCSHHHHHH
T ss_pred cccCCCCcchHH----hcccCCCCCCCccHHHHHHHHHHHHHHcC------CCCCCCCc--CCCCCEEEEECCCHHHHHH
Confidence 689999999998 9998876 788887765554332110000 00001111 1345799999999999999
Q ss_pred HHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcceecHHHHHHHHHHHHH
Q 011835 123 AAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGRVSRHLLHEELLRRCV 202 (476)
Q Consensus 123 A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~ 202 (476)
|+.|++.|++|+|||+....+.. + ..++ +...+.+. +...+.+.++
T Consensus 138 A~~L~~~G~~V~v~e~~~~~GG~---l-----~~gi-------------------------p~~~~~~~-~~~~~~~~l~ 183 (456)
T 2vdc_G 138 AEELRAKGYEVHVYDRYDRMGGL---L-----VYGI-------------------------PGFKLEKS-VVERRVKLLA 183 (456)
T ss_dssp HHHHHHHTCCEEEECSSSSCSTH---H-----HHTS-------------------------CTTTSCHH-HHHHHHHHHH
T ss_pred HHHHHHCCCeEEEEeccCCCCCe---e-----eecC-------------------------CCccCCHH-HHHHHHHHHH
Confidence 99999999999999997643211 0 0011 00112332 3444567778
Q ss_pred HCCCeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCCCC
Q 011835 203 ESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGK 249 (476)
Q Consensus 203 ~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S~~ 249 (476)
+.|++++ ++.|. . .+.++++ .+.+|.||+|+|++...
T Consensus 184 ~~gv~~~~~~~v~-----~----~v~~~~~-~~~~d~vvlAtG~~~~~ 221 (456)
T 2vdc_G 184 DAGVIYHPNFEVG-----R----DASLPEL-RRKHVAVLVATGVYKAR 221 (456)
T ss_dssp HTTCEEETTCCBT-----T----TBCHHHH-HSSCSEEEECCCCCEEC
T ss_pred HCCcEEEeCCEec-----c----EEEhhHh-HhhCCEEEEecCCCCCC
Confidence 8899999 77652 1 1222232 25699999999987433
No 89
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.22 E-value=2e-11 Score=120.69 Aligned_cols=137 Identities=15% Similarity=0.181 Sum_probs=84.9
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCC-cEEEECCCCCCCCCcccchHHHHhcCcchhh-hhhcccceee-eCCCCCEEecc
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGL-NVGLIGPDLPFTNNYGVWEDEFRDLGLEGCI-EHVWRDTVVY-IDEDEPILIGR 183 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~-~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~ 183 (476)
.+||+|||||++|+++|+.|++.|+ +|+|||+.. .+..|-.+.... .-+.... ...+.-.... ........+..
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 80 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGHSFKHWPKST--RTITPSFTSNGFGMPDMNAISMDTSPAFTF 80 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTHHHHTSCTTC--BCSSCCCCCGGGTCCCTTCSSTTCCHHHHH
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCCccccCcccc--cccCcchhcccCCchhhhhccccccccccc
Confidence 4799999999999999999999999 999999876 221110000000 0000000 0000000000 00000000000
Q ss_pred CcceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCCC
Q 011835 184 AYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASG 248 (476)
Q Consensus 184 ~~~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S~ 248 (476)
....+.+..+...+.+.+++.|++++ +++|++++.+++ .+.|.+.++ ++.+|.||+|+|.++.
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~-~~~v~~~~g-~~~~d~vVlAtG~~~~ 144 (369)
T 3d1c_A 81 NEEHISGETYAEYLQVVANHYELNIFENTVVTNISADDA-YYTIATTTE-TYHADYIFVATGDYNF 144 (369)
T ss_dssp CCSSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSS-SEEEEESSC-CEEEEEEEECCCSTTS
T ss_pred cccCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCC-eEEEEeCCC-EEEeCEEEECCCCCCc
Confidence 11135677788888888888999999 899999998765 466777776 5899999999998763
No 90
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.22 E-value=1.3e-09 Score=110.14 Aligned_cols=45 Identities=16% Similarity=0.064 Sum_probs=37.3
Q ss_pred HHHCCCeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCC
Q 011835 201 CVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAAS 247 (476)
Q Consensus 201 ~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S 247 (476)
+++.| +|+ +++|++|+.+++ .+.|.+.+|++++||.||+|+|...
T Consensus 214 ~~~~g-~i~~~~~V~~i~~~~~-~v~v~~~~g~~~~ad~vi~a~~~~~ 259 (431)
T 3k7m_X 214 SQEIP-EIRLQTVVTGIDQSGD-VVNVTVKDGHAFQAHSVIVATPMNT 259 (431)
T ss_dssp HTTCS-CEESSCCEEEEECSSS-SEEEEETTSCCEEEEEEEECSCGGG
T ss_pred HhhCC-ceEeCCEEEEEEEcCC-eEEEEECCCCEEEeCEEEEecCcch
Confidence 34557 999 999999998777 4678888888899999999999543
No 91
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.21 E-value=5.1e-11 Score=123.92 Aligned_cols=136 Identities=18% Similarity=0.099 Sum_probs=89.7
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhh-hhcccceeeeCCCCCEEecc
Q 011835 105 NGILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIE-HVWRDTVVYIDEDEPILIGR 183 (476)
Q Consensus 105 ~~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 183 (476)
...+||+|||||++|+++|+.|++.|++|+|||+....+..| ... .--++.-.++ ..+. ..+..........
T Consensus 19 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw---~~~-~ypg~~~dv~s~~y~---~~f~~~~~~~~~~ 91 (549)
T 4ap3_A 19 TTSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVW---YWN-RYPGARCDVESIDYS---YSFSPELEQEWNW 91 (549)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHH---HHC-CCTTCBCSSCTTTSS---CCSCHHHHHHCCC
T ss_pred CCCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCcc---ccC-CCCCceeCCCchhcc---cccccccccCCCC
Confidence 346899999999999999999999999999999977554221 000 0000000000 0000 0000000000000
Q ss_pred CcceecHHHHHHHHHHHHHHCCC--eEE-EEEEEEEEEcCC-ceEEEEecCceEEECceEEEccCCCC
Q 011835 184 AYGRVSRHLLHEELLRRCVESGV--SYL-SSKVESITESTS-GHRLVACEHDMIVPCRLATVASGAAS 247 (476)
Q Consensus 184 ~~~~i~r~~l~~~L~~~~~~~gv--~i~-~~~v~~i~~~~~-~~~~v~~~~g~~i~a~~vV~A~G~~S 247 (476)
.....++..+.+.+.+.+++.|+ .++ +++|++++.+++ +.+.|.+.+|+++++|.||+|+|..|
T Consensus 92 ~~~~~~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~s 159 (549)
T 4ap3_A 92 SEKYATQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPLS 159 (549)
T ss_dssp SSSSCBHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSEE
T ss_pred ccCCCCHHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCCCC
Confidence 11236788899999999999998 788 999999987654 36888999998999999999999765
No 92
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.21 E-value=1.3e-10 Score=121.10 Aligned_cols=137 Identities=15% Similarity=0.053 Sum_probs=88.7
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHH-HHhcCcchhhhhhcccceeeeCCCCCEEeccC
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDE-FRDLGLEGCIEHVWRDTVVYIDEDEPILIGRA 184 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (476)
..+||+|||||++|+++|+.|++.|++|+|||+....+..| ... .....+.. -...+. ..+.......+...
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w---~~~~~pg~~~d~-~~~~~~---~~f~~~~~~~~~~~ 87 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVW---YWNRYPGARCDI-ESIEYC---YSFSEEVLQEWNWT 87 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHH---HHCCCTTCBCSS-CTTTSS---CCSCHHHHHHCCCC
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcc---cccCCCceeecc-cccccc---cccChhhhhccCcc
Confidence 46899999999999999999999999999999987554322 100 00000000 000000 00000000000001
Q ss_pred cceecHHHHHHHHHHHHHHCC--CeEE-EEEEEEEEEcCC-ceEEEEecCceEEECceEEEccCCCCCC
Q 011835 185 YGRVSRHLLHEELLRRCVESG--VSYL-SSKVESITESTS-GHRLVACEHDMIVPCRLATVASGAASGK 249 (476)
Q Consensus 185 ~~~i~r~~l~~~L~~~~~~~g--v~i~-~~~v~~i~~~~~-~~~~v~~~~g~~i~a~~vV~A~G~~S~~ 249 (476)
....++..+.+.|.+.+++.+ +.++ +++|++++.+++ +.+.|.+.+|++++||.||+|+|.+|..
T Consensus 88 ~~~~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~~s~p 156 (542)
T 1w4x_A 88 ERYASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQLSVP 156 (542)
T ss_dssp BSSCBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSCCCC
T ss_pred cccCCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCCCCCC
Confidence 113567888888888787766 6788 999999988654 4688888889889999999999988743
No 93
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.20 E-value=1.5e-09 Score=111.12 Aligned_cols=189 Identities=10% Similarity=0.022 Sum_probs=94.0
Q ss_pred CeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCCCC-ccccccC--CCcccceeEEEEEEEeeCCC-CCCC
Q 011835 206 VSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGK-LLEYEVG--GPKVSVQTAYGVEVEVENNP-YDPS 280 (476)
Q Consensus 206 v~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S~~-~~~~~~~--~~~~~~~~~~g~~~~~~~~~-~~~~ 280 (476)
++|+ +++|++|+.+++ .+.|.+.+| ++.||.||+|++.+... ++.-+.. .....+.....+.+.++... .+..
T Consensus 249 ~~i~~~~~V~~i~~~~~-~~~v~~~~g-~~~ad~vV~a~p~~~~~~ll~~~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~ 326 (475)
T 3lov_A 249 SEIRLETPLLAISREDG-RYRLKTDHG-PEYADYVLLTIPHPQVVQLLPDAHLPELEQLTTHSTATVTMIFDQQQSLPIE 326 (475)
T ss_dssp CEEESSCCCCEEEEETT-EEEEECTTC-CEEESEEEECSCHHHHHHHCTTSCCHHHHTCCEEEEEEEEEEEECCSSCSSS
T ss_pred CEEEcCCeeeEEEEeCC-EEEEEECCC-eEECCEEEECCCHHHHHHHcCccCHHHHhcCCCCeEEEEEEEECCcCCCCCC
Confidence 6899 999999998877 577888888 79999999999976521 1111100 00123344444555554322 1111
Q ss_pred ceeeeccCCCCCCCccccCCCCC--eEEEE---EEc-CCceEEE-Eeec-ccC--CCCCChHHHHHHHHHHHHHc-CCcc
Q 011835 281 LMVFMDYRDCTKQEVPSFESDNP--TFLYV---MPM-SSTRVFF-EETC-LAS--KDGLPFDILKKKLMARLERL-GIQV 349 (476)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~---~p~-~~~~~~~-~~~~-~~~--~~~~~~~~~~~~l~~~~~~~-~~~~ 349 (476)
...++..... ... +..|. .|. .++...+ .... ... ....+.+++.+.+.+.+.++ +...
T Consensus 327 g~g~l~~~~~----------~~~~~~~~~~s~~~~~~~p~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~L~~~~g~~~ 396 (475)
T 3lov_A 327 GTGFVVNRRA----------PYSITACTAIDQKWNHSAPDHTVLRAFVGRPGNDHLVHESDEVLQQAVLQDLEKICGRTL 396 (475)
T ss_dssp SSEEEECTTS----------SCSEEEEEEHHHHCTTTCTTEEEEEEEECBTTBCGGGGSCHHHHHHHHHHHHHHHHSSCC
T ss_pred CEEEEecCCC----------CCceEEEEEEcccCCCCCCCcEEEEEEeCCCCCCcccCCCHHHHHHHHHHHHHHHhCCCC
Confidence 1111111100 000 00110 011 0111111 1110 011 12345677777777777664 3321
Q ss_pred cc--eeEEEEE-EeeCCCCC---------C---CCCCCeeEeccccCccCCcchHHHHHHHHhHHHHHHHHHHHhccC
Q 011835 350 LK--TYEEEWS-YIPVGGSL---------P---NTEQRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAYILKHD 412 (476)
Q Consensus 350 ~~--~~~~~~~-~~p~~~~~---------~---~~~~rv~liGDAAh~~~P~~G~G~~~Al~da~~la~~l~~~l~~~ 412 (476)
.. .....|. .+|....- + ...+++.++||+- .|.|+.-|+.+|..+|+.|...+...
T Consensus 397 ~p~~~~v~~w~~a~p~~~~g~~~~~~~~~~~l~~~~~~l~~aG~~~------~g~g~~~a~~sG~~aA~~i~~~l~~~ 468 (475)
T 3lov_A 397 EPKQVIISRLMDGLPAYTVGHADRIQRVREEVLAQYPGIYLAGLAY------DGVGLPDCVASAKTMIESIELEQSHT 468 (475)
T ss_dssp CCSEEEEEEEEEEEECCCTTHHHHHHHHHHHHHHHSTTEEECSTTT------SCSSHHHHHHHHHHHHHHHHHTC---
T ss_pred CCeEEEEEEcccCCCCCCCChHHHHHHHHHHHHhhCCCEEEEccCC------CCCCHHHHHHHHHHHHHHHHHHhhcc
Confidence 11 1111222 23322110 0 1136899999954 35579999999999999998876543
No 94
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.19 E-value=4.7e-11 Score=115.60 Aligned_cols=113 Identities=15% Similarity=0.190 Sum_probs=81.3
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCc
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAY 185 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (476)
..+||+||||||+|+++|+.|++.|++|+|||+... ...+... ..+. .++ .+
T Consensus 15 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~-gg~~~~~------~~~~------------~~~---------~~ 66 (319)
T 3cty_A 15 RDFDVVIVGAGAAGFSAAVYAARSGFSVAILDKAVA-GGLTAEA------PLVE------------NYL---------GF 66 (319)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSST-TGGGGGC------SCBC------------CBT---------TB
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCC-Ccccccc------chhh------------hcC---------CC
Confidence 358999999999999999999999999999998431 1111000 0000 000 00
Q ss_pred ceecHHHHHHHHHHHHHHCCCeEEEEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCCC
Q 011835 186 GRVSRHLLHEELLRRCVESGVSYLSSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASG 248 (476)
Q Consensus 186 ~~i~r~~l~~~L~~~~~~~gv~i~~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S~ 248 (476)
..+.+..+...+.+.+.+.|++++.++|++++.+++ .+.|.+ ++.++.+|.||+|+|.++.
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i~~~~~-~~~v~~-~~~~~~~~~li~AtG~~~~ 127 (319)
T 3cty_A 67 KSIVGSELAKLFADHAANYAKIREGVEVRSIKKTQG-GFDIET-NDDTYHAKYVIITTGTTHK 127 (319)
T ss_dssp SSBCHHHHHHHHHHHHHTTSEEEETCCEEEEEEETT-EEEEEE-SSSEEEEEEEEECCCEEEC
T ss_pred cccCHHHHHHHHHHHHHHcCCEEEEeeEEEEEEeCC-EEEEEE-CCCEEEeCEEEECCCCCcc
Confidence 125667788888888888999988668999987766 455666 5567999999999997653
No 95
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=99.18 E-value=4.4e-11 Score=115.21 Aligned_cols=111 Identities=25% Similarity=0.374 Sum_probs=82.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcce
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (476)
+||+||||||+|+++|+.|++.|++|+|||+... |.+.. ..++. .+ .....
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~~~g-----G~~~~---~~~~~------------~~---------~~~~~ 52 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSARKGIRTGLMGERFG-----GQILD---TVDIE------------NY---------ISVPK 52 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSTT-----GGGGG---CCEEC------------CB---------TTBSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCC-----ceecc---ccccc------------cc---------cCcCC
Confidence 7999999999999999999999999999986421 11110 00000 00 00012
Q ss_pred ecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcC--CceEEEEecCceEEECceEEEccCCCC
Q 011835 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITEST--SGHRLVACEHDMIVPCRLATVASGAAS 247 (476)
Q Consensus 188 i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~--~~~~~v~~~~g~~i~a~~vV~A~G~~S 247 (476)
.++..+.+.+.+.+.+.|++++ +++|+.++.+. ++.+.|.+.+|+++.+|.||+|+|.++
T Consensus 53 ~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~ 115 (310)
T 1fl2_A 53 TEGQKLAGALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKW 115 (310)
T ss_dssp EEHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEEE
T ss_pred CCHHHHHHHHHHHHHHcCCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcCCCc
Confidence 4677788888888888999999 88999997652 225778888888899999999999865
No 96
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=99.17 E-value=8.4e-10 Score=113.05 Aligned_cols=37 Identities=24% Similarity=0.367 Sum_probs=32.8
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCC
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPF 142 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~ 142 (476)
..+||+|||||++||++|+.|++.|++|+|+|+....
T Consensus 15 ~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~ 51 (478)
T 2ivd_A 15 TGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARL 51 (478)
T ss_dssp --CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCC
Confidence 4579999999999999999999999999999987644
No 97
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.16 E-value=6.7e-11 Score=122.93 Aligned_cols=136 Identities=18% Similarity=0.162 Sum_probs=89.4
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHH-HHhcCcchhhhhhcccceeeeCCCCCEEeccC
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDE-FRDLGLEGCIEHVWRDTVVYIDEDEPILIGRA 184 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (476)
..+||+|||||++|+++|+.|++.|++|+|||+....+..| ... .....+. .-.+.+. ..+.......+...
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw---~~~~yPg~~~d-~~~~~y~---~~f~~~~~~~~~~~ 80 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTW---YWNRYPGCRLD-TESYAYG---YFALKGIIPEWEWS 80 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHH---HHCCCTTCBCS-SCHHHHC---HHHHTTSSTTCCCS
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcc---ccCCCCceeec-Cchhhcc---cccCcccccCCCcc
Confidence 45899999999999999999999999999999987554222 000 0000000 0000000 00000000000011
Q ss_pred cceecHHHHHHHHHHHHHHCCC--eEE-EEEEEEEEEcCC-ceEEEEecCceEEECceEEEccCCCCC
Q 011835 185 YGRVSRHLLHEELLRRCVESGV--SYL-SSKVESITESTS-GHRLVACEHDMIVPCRLATVASGAASG 248 (476)
Q Consensus 185 ~~~i~r~~l~~~L~~~~~~~gv--~i~-~~~v~~i~~~~~-~~~~v~~~~g~~i~a~~vV~A~G~~S~ 248 (476)
.....+..+...+.+.+++.|+ .++ +++|++++.+++ +.+.|.+.+|+++++|.||+|+|..|.
T Consensus 81 ~~~~~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~~s~ 148 (545)
T 3uox_A 81 ENFASQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGPLSA 148 (545)
T ss_dssp BSSCBHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCSCBC
T ss_pred ccCCCHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCCCCC
Confidence 1235788888888888888887 788 999999987654 378899999999999999999997663
No 98
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.14 E-value=2.2e-10 Score=120.38 Aligned_cols=145 Identities=17% Similarity=0.161 Sum_probs=87.8
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcC--CcEEEECCCCCCCC-----Cccc---------chH----HHHh-cCc--chhh
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLG--LNVGLIGPDLPFTN-----NYGV---------WED----EFRD-LGL--EGCI 162 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G--~~V~liE~~~~~~~-----~~G~---------~~~----~l~~-~~~--~~~~ 162 (476)
..+||||||||+|||++|+.|++.| ++|+||||...... .-|+ |.. .+.. -++ ...+
T Consensus 4 ~~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~~~~s~~a~GGi~~~~~~~ds~~~~~~d~~~~g~~~~d~~~v 83 (602)
T 1kf6_A 4 FQADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVAQDHDSFEYHFHDTVAGGDWLCEQDVV 83 (602)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGGGSGGGGCCSCEECCCSTTCCHHHHHHHHHHHTTTCSCHHHH
T ss_pred ccCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCCCChHHHhcCccEEeCCCCCCHHHHHHHHHHhcCCCCCHHHH
Confidence 4589999999999999999999999 99999999754321 1121 111 1111 011 1111
Q ss_pred hhh---------c-ccceeeeC--CCCCEE---e-ccCcc------eecHHHHHHHHHHHHHHCC-CeEE-EEEEEEEEE
Q 011835 163 EHV---------W-RDTVVYID--EDEPIL---I-GRAYG------RVSRHLLHEELLRRCVESG-VSYL-SSKVESITE 218 (476)
Q Consensus 163 ~~~---------~-~~~~~~~~--~~~~~~---~-~~~~~------~i~r~~l~~~L~~~~~~~g-v~i~-~~~v~~i~~ 218 (476)
... | ....+.+. ...... . +.... ......+...|.+.+.+.| |+++ ++.|+++..
T Consensus 84 ~~~~~~~~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg~~~~r~~~~~d~tg~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~ 163 (602)
T 1kf6_A 84 DYFVHHCPTEMTQLELWGCPWSRRPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLDILV 163 (602)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCBCTTSSBCCBCCTTCSSCCEECSTTCHHHHHHHHHHHHHTTCTTEEEEETEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCCCcccccccCCccCCeEEEcCCCCHHHHHHHHHHHHHhCCCcEEEeCCEEEEEEE
Confidence 000 0 00001111 000000 0 00000 0124578889999998888 9999 999999998
Q ss_pred cCCceEEEEe---cCce--EEECceEEEccCCCCCCc
Q 011835 219 STSGHRLVAC---EHDM--IVPCRLATVASGAASGKL 250 (476)
Q Consensus 219 ~~~~~~~v~~---~~g~--~i~a~~vV~A~G~~S~~~ 250 (476)
+++.+.+|.+ .+|+ ++.|+.||+|||.+|..+
T Consensus 164 ~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s~~~ 200 (602)
T 1kf6_A 164 DDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRVY 200 (602)
T ss_dssp ETTEEEEEEEEETTTTEEEEEECSCEEECCCCCGGGS
T ss_pred eCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCCcccc
Confidence 7664445533 5665 789999999999998653
No 99
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=99.14 E-value=7.6e-11 Score=114.02 Aligned_cols=113 Identities=18% Similarity=0.227 Sum_probs=80.0
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCc
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAY 185 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (476)
..+||+||||||||+++|+.|++.|++|+|||+... . |.+.. . ... ...+ +.+.
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~-g---g~~~~-------~-------~~~-~~~~-------~~~~ 57 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAARANLQPVLITGMEK-G---GQLTT-------T-------TEV-ENWP-------GDPN 57 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCSST-T---GGGGG-------C-------SBC-CCST-------TCCS
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEccCCC-C---ceEec-------c-------hhh-hhCC-------CCCC
Confidence 357999999999999999999999999999997521 1 11000 0 000 0000 0011
Q ss_pred ceecHHHHHHHHHHHHHHCCCeEEEEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCC
Q 011835 186 GRVSRHLLHEELLRRCVESGVSYLSSKVESITESTSGHRLVACEHDMIVPCRLATVASGAAS 247 (476)
Q Consensus 186 ~~i~r~~l~~~L~~~~~~~gv~i~~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S 247 (476)
.+.+..+.+.+.+.+.+.|++++...|+.++.+++ .+.+ +.++.++.+|.||+|+|..+
T Consensus 58 -~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~-~~~v-~~~~~~~~~~~lv~AtG~~~ 116 (320)
T 1trb_A 58 -DLTGPLLMERMHEHATKFETEIIFDHINKVDLQNR-PFRL-NGDNGEYTCDALIIATGASA 116 (320)
T ss_dssp -SCBHHHHHHHHHHHHHHTTCEEECCCEEEEECSSS-SEEE-EESSCEEEEEEEEECCCEEE
T ss_pred -CCCHHHHHHHHHHHHHHCCCEEEEeeeeEEEecCC-EEEE-EeCCCEEEcCEEEECCCCCc
Confidence 25677788888888889999999334888887665 4555 56777899999999999865
No 100
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.14 E-value=1.7e-10 Score=117.65 Aligned_cols=140 Identities=13% Similarity=0.134 Sum_probs=86.5
Q ss_pred ccEEEECCCHHHHHHHHHHHH---cCCc---EEEECCCCCCCCCcccch-HHHHhcCcchhhhhhcccceeeeCCCC---
Q 011835 108 LDLVVIGCGPAGLALAAESAK---LGLN---VGLIGPDLPFTNNYGVWE-DEFRDLGLEGCIEHVWRDTVVYIDEDE--- 177 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~---~G~~---V~liE~~~~~~~~~G~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~--- 177 (476)
+||+||||||+|+++|..|++ .|++ |+|||+....+..|-... .....+++.. ....+.......+...
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~-~~~~y~~l~~~~~~~~~~~ 81 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPV-HSSMYRYLWSNGPKECLEF 81 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBC-CCCCCTTCBCSSCGGGTCB
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCC-cCccccchhhcCChhhccc
Confidence 599999999999999999999 9999 999999765442221100 0000001000 0000000000000000
Q ss_pred -CEEec-----cCcceecHHHHHHHHHHHHHHCCCe--EE-EEEEEEEEEcCC-ceEEEEecC---c--eEEECceEEEc
Q 011835 178 -PILIG-----RAYGRVSRHLLHEELLRRCVESGVS--YL-SSKVESITESTS-GHRLVACEH---D--MIVPCRLATVA 242 (476)
Q Consensus 178 -~~~~~-----~~~~~i~r~~l~~~L~~~~~~~gv~--i~-~~~v~~i~~~~~-~~~~v~~~~---g--~~i~a~~vV~A 242 (476)
...+. .....+++..+.+.|.+.+++.|++ ++ +++|+.++..++ +.+.|++.+ | .++.+|.||+|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VVvA 161 (464)
T 2xve_A 82 ADYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVVCC 161 (464)
T ss_dssp TTBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEEC
T ss_pred CCCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEEEC
Confidence 00000 0012367888999999999888998 88 999999988654 256666654 4 57899999999
Q ss_pred cCCCCC
Q 011835 243 SGAASG 248 (476)
Q Consensus 243 ~G~~S~ 248 (476)
+|.+|.
T Consensus 162 tG~~s~ 167 (464)
T 2xve_A 162 TGHFST 167 (464)
T ss_dssp CCSSSS
T ss_pred CCCCCC
Confidence 997664
No 101
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=99.13 E-value=1.1e-10 Score=114.02 Aligned_cols=113 Identities=23% Similarity=0.239 Sum_probs=80.5
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCc
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAY 185 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (476)
..+||+||||||+|+++|+.|++.|++|+|||+... . |.+.. .. . ....+ +.+.
T Consensus 13 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~-g---g~~~~-------~~-------~-~~~~~-------~~~~ 66 (335)
T 2a87_A 13 PVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGTSF-G---GALMT-------TT-------D-VENYP-------GFRN 66 (335)
T ss_dssp CCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCSSC-S---CGGGS-------CS-------C-BCCST-------TCTT
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCCC-C---Cceec-------cc-------h-hhhcC-------CCCC
Confidence 458999999999999999999999999999997521 1 11000 00 0 00000 0011
Q ss_pred ceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEE-EecCceEEECceEEEccCCCCC
Q 011835 186 GRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLV-ACEHDMIVPCRLATVASGAASG 248 (476)
Q Consensus 186 ~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v-~~~~g~~i~a~~vV~A~G~~S~ 248 (476)
.+.+..+...+.+.+.+.|++++ ++ |++++. ++ .+.| .+.+++++.+|.||+|+|..+.
T Consensus 67 -~~~~~~~~~~l~~~~~~~~v~~~~~~-v~~i~~-~~-~~~v~~~~~g~~~~~d~lviAtG~~~~ 127 (335)
T 2a87_A 67 -GITGPELMDEMREQALRFGADLRMED-VESVSL-HG-PLKSVVTADGQTHRARAVILAMGAAAR 127 (335)
T ss_dssp -CBCHHHHHHHHHHHHHHTTCEEECCC-EEEEEC-SS-SSEEEEETTSCEEEEEEEEECCCEEEC
T ss_pred -CCCHHHHHHHHHHHHHHcCCEEEEee-EEEEEe-CC-cEEEEEeCCCCEEEeCEEEECCCCCcc
Confidence 25677788888888888999999 65 888887 33 4556 6778888999999999998653
No 102
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.13 E-value=1.7e-10 Score=119.83 Aligned_cols=144 Identities=19% Similarity=0.267 Sum_probs=80.1
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCC-----cccc---------h----HHHHh-cCc--chhhh
Q 011835 105 NGILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNN-----YGVW---------E----DEFRD-LGL--EGCIE 163 (476)
Q Consensus 105 ~~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~-----~G~~---------~----~~l~~-~~~--~~~~~ 163 (476)
...+||+|||||+|||++|+.|++ |++|+||||......+ -|++ . +.+.. .++ ...+.
T Consensus 6 ~~~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~ds~~~~~~d~l~~g~g~~d~~~v~ 84 (540)
T 1chu_A 6 EHSCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVTEGSTFYAQGGIAAVFDETDSIDSHVEDTLIAGAGICDRHAVE 84 (540)
T ss_dssp SEECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTTC-------------CCSHHHHHHHHHHHHHHTTTCCCHHHHH
T ss_pred CCCCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCCCCChhhcCCCEEEecCCCCCHHHHHHHHHHhhcccCCHHHHH
Confidence 346899999999999999999999 9999999997654321 1121 0 01110 011 11111
Q ss_pred hh---------c-ccceeeeCC------CCCEEec----cCc------ceecHHHHHHHHHHHHHH-CCCeEE-EEEEEE
Q 011835 164 HV---------W-RDTVVYIDE------DEPILIG----RAY------GRVSRHLLHEELLRRCVE-SGVSYL-SSKVES 215 (476)
Q Consensus 164 ~~---------~-~~~~~~~~~------~~~~~~~----~~~------~~i~r~~l~~~L~~~~~~-~gv~i~-~~~v~~ 215 (476)
.. | ....+.+.. ....... ... .......+...|.+.+.+ .||+++ ++.|++
T Consensus 85 ~~~~~~~~~i~~l~~~Gv~f~~~~~~~~~g~~~~~~~gg~~~~r~~~~~d~~g~~l~~~L~~~~~~~~gv~i~~~~~v~~ 164 (540)
T 1chu_A 85 FVASNARSCVQWLIDQGVLFDTHIQPNGEESYHLTREGGHSHRRILHAADATGREVETTLVSKALNHPNIRVLERTNAVD 164 (540)
T ss_dssp HHHHHHHHHHHHHHHTTCC--------------------------------------CCCHHHHHHCTTEEEECSEEEEE
T ss_pred HHHHhHHHHHHHHHHcCCCcccCcccCcCCccccccccccccCeEEEeCCCCHHHHHHHHHHHHHcCCCCEEEeCcEEEE
Confidence 00 0 000011110 0000000 000 011234677778888887 799999 999999
Q ss_pred EEE-cCC------ceEEEEec---Cce--EEECceEEEccCCCCCC
Q 011835 216 ITE-STS------GHRLVACE---HDM--IVPCRLATVASGAASGK 249 (476)
Q Consensus 216 i~~-~~~------~~~~v~~~---~g~--~i~a~~vV~A~G~~S~~ 249 (476)
+.. +++ .+.+|.+. +|+ ++.|+.||+|||.++..
T Consensus 165 L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~ 210 (540)
T 1chu_A 165 LIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGASKV 210 (540)
T ss_dssp EEEGGGTTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCCGGG
T ss_pred EEEcCCCCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCcccc
Confidence 998 433 45556554 564 78999999999999854
No 103
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.12 E-value=2.1e-10 Score=118.74 Aligned_cols=114 Identities=24% Similarity=0.387 Sum_probs=84.1
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCc
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAY 185 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (476)
..+||+||||||||+++|+.|++.|++|+|+|+... |.+.. ..++.. + .+.
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~~G-----G~~~~---~~~~~~------------~-------~~~-- 261 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGERFG-----GQVLD---TVDIEN------------Y-------ISV-- 261 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSTT-----GGGTT---CSCBCC------------B-------TTB--
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCeEEEEECCCC-----Ccccc---cccccc------------c-------CCC--
Confidence 468999999999999999999999999999986321 11100 001000 0 000
Q ss_pred ceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcC--CceEEEEecCceEEECceEEEccCCCCC
Q 011835 186 GRVSRHLLHEELLRRCVESGVSYL-SSKVESITEST--SGHRLVACEHDMIVPCRLATVASGAASG 248 (476)
Q Consensus 186 ~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~--~~~~~v~~~~g~~i~a~~vV~A~G~~S~ 248 (476)
....+..+...+.+.+.+.|++++ +++|++++.+. ++.+.|.+.+|.++++|.||+|+|+++.
T Consensus 262 ~~~~~~~l~~~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~~ 327 (521)
T 1hyu_A 262 PKTEGQKLAGALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAKWR 327 (521)
T ss_dssp SSBCHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEEEC
T ss_pred CCCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCCcC
Confidence 124677788888898999999999 88999997642 2257788888888999999999997653
No 104
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.12 E-value=3.6e-10 Score=115.49 Aligned_cols=141 Identities=21% Similarity=0.187 Sum_probs=83.1
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCC----ccc---------chHHHHhc-----Cc--chhhhh----
Q 011835 109 DLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNN----YGV---------WEDEFRDL-----GL--EGCIEH---- 164 (476)
Q Consensus 109 dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~----~G~---------~~~~l~~~-----~~--~~~~~~---- 164 (476)
||+|||||+||+++|+.|++.|++|+||||....... -|+ +...+.+. ++ ...+..
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~~~~g~s~~a~Ggi~~~~~~~d~~~~~~~d~l~~g~~~~d~~~v~~~~~~ 80 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKRIDGGSTPIAKGGVAASVGSDDSPELHAQDTIRVGDGLCDVKTVNYVTSE 80 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSTTCSSGGGCCSCEECCCSTTCCHHHHHHHHHHHHTTCSCHHHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCchHHHHhCCeEEeCCCCCCHHHHHHHHHHhcCCcCCHHHHHHHHHH
Confidence 7999999999999999999999999999998322211 011 11111110 11 000000
Q ss_pred ------hcccceeeeCCC----CCEEecc--CcceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEec-C
Q 011835 165 ------VWRDTVVYIDED----EPILIGR--AYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACE-H 230 (476)
Q Consensus 165 ------~~~~~~~~~~~~----~~~~~~~--~~~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~-~ 230 (476)
......+.++.. ....... ..+......+...|.+.+++.|++++ +++| ++..+++.+.++.+. +
T Consensus 81 ~~~~i~~l~~~Gv~~~~~~~~~~g~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~~~~v~Gv~v~~~ 159 (472)
T 2e5v_A 81 AKNVIETFESWGFEFEEDLRLEGGHTKRRVLHRTDETGREIFNFLLKLAREEGIPIIEDRLV-EIRVKDGKVTGFVTEKR 159 (472)
T ss_dssp HHHHHHHHHHTTCCCCSSCBCCTTCSSCCEECSSSCHHHHHHHHHHHHHHHTTCCEECCCEE-EEEEETTEEEEEEETTT
T ss_pred HHHHHHHHHHcCCCCCcccccccCcCcCcEEEeCCCCHHHHHHHHHHHHHhCCCEEEECcEE-EEEEeCCEEEEEEEEeC
Confidence 000000111110 0000000 00123456788888998888899999 9999 998776645455543 2
Q ss_pred ceEEECceEEEccCCCCCCc
Q 011835 231 DMIVPCRLATVASGAASGKL 250 (476)
Q Consensus 231 g~~i~a~~vV~A~G~~S~~~ 250 (476)
+.++.+|.||+|||.++..+
T Consensus 160 ~g~~~a~~VVlAtGg~~~~~ 179 (472)
T 2e5v_A 160 GLVEDVDKLVLATGGYSYLY 179 (472)
T ss_dssp EEECCCSEEEECCCCCGGGS
T ss_pred CCeEEeeeEEECCCCCcccC
Confidence 33578999999999988543
No 105
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=99.11 E-value=2.1e-08 Score=103.05 Aligned_cols=56 Identities=9% Similarity=0.122 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHCC-CeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCCC
Q 011835 192 LLHEELLRRCVESG-VSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASG 248 (476)
Q Consensus 192 ~l~~~L~~~~~~~g-v~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S~ 248 (476)
.+.+.|.+.+.+.| ++|+ +++|++|+.+++ .+.|.+.+|++++||.||+|.|....
T Consensus 256 ~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~-~v~v~~~~g~~~~ad~vI~a~~~~~l 313 (495)
T 2vvm_A 256 AFARRFWEEAAGTGRLGYVFGCPVRSVVNERD-AARVTARDGREFVAKRVVCTIPLNVL 313 (495)
T ss_dssp HHHHHHHHHHHTTTCEEEESSCCEEEEEECSS-SEEEEETTCCEEEEEEEEECCCGGGG
T ss_pred HHHHHHHHHhhhcCceEEEeCCEEEEEEEcCC-EEEEEECCCCEEEcCEEEECCCHHHH
Confidence 45666777777788 9999 999999998776 57788888888999999999997653
No 106
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.10 E-value=5.6e-10 Score=117.04 Aligned_cols=145 Identities=20% Similarity=0.272 Sum_probs=87.7
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCC-CC----ccc-----------chHHHHh-----cCc--chhh
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFT-NN----YGV-----------WEDEFRD-----LGL--EGCI 162 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~-~~----~G~-----------~~~~l~~-----~~~--~~~~ 162 (476)
..+||||||||+|||++|+.|++.|++|+||||..... .. -|+ +...+.+ -++ ...+
T Consensus 6 ~~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~~~g~s~~a~GGi~~~~~~~~~ds~~~~~~d~~~~g~~~~d~~~v 85 (588)
T 2wdq_A 6 REFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQDAI 85 (588)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCCHHHHHHHHHHHTTTCSCHHHH
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCCCCcchhhCCccEEcCCCCCCCCHHHHHHHHHHhcCCCCCHHHH
Confidence 45899999999999999999999999999999976432 10 111 0111111 011 1111
Q ss_pred hhh---------c-ccceeeeC--CCCCEE---ec-cC-------cc------eecHHHHHHHHHHHHHHCCCeEE-EEE
Q 011835 163 EHV---------W-RDTVVYID--EDEPIL---IG-RA-------YG------RVSRHLLHEELLRRCVESGVSYL-SSK 212 (476)
Q Consensus 163 ~~~---------~-~~~~~~~~--~~~~~~---~~-~~-------~~------~i~r~~l~~~L~~~~~~~gv~i~-~~~ 212 (476)
... | ....+.+. ...... .+ .. .. ......+...|.+.+.+.||+++ ++.
T Consensus 86 ~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~~g~~~~~~~~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~i~~~~~ 165 (588)
T 2wdq_A 86 EYMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSEWY 165 (588)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCBCTTSSBCEECCTTCBSTTTCSBCCCEECSTTCHHHHHHHHHHHHHHHTTCEEEETEE
T ss_pred HHHHHhHHHHHHHHHHcCCCcccCCCCcEeeeecCCccccccccCcceEEEcCCCCHHHHHHHHHHHHHhCCCEEEeCcE
Confidence 100 0 00001111 000000 00 00 00 01236788889999988999999 999
Q ss_pred EEEEEEc-CCceEEEEe---cCce--EEECceEEEccCCCCCCc
Q 011835 213 VESITES-TSGHRLVAC---EHDM--IVPCRLATVASGAASGKL 250 (476)
Q Consensus 213 v~~i~~~-~~~~~~v~~---~~g~--~i~a~~vV~A~G~~S~~~ 250 (476)
|+++..+ ++.+.+|.+ .+|+ ++.|+.||+|+|.++...
T Consensus 166 v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~~~y 209 (588)
T 2wdq_A 166 ALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAGRIY 209 (588)
T ss_dssp EEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCCGGGS
T ss_pred EEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCCcccc
Confidence 9999986 444555654 3553 689999999999988543
No 107
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=99.09 E-value=5.9e-09 Score=107.97 Aligned_cols=44 Identities=14% Similarity=0.034 Sum_probs=37.6
Q ss_pred HCCCeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCC
Q 011835 203 ESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAAS 247 (476)
Q Consensus 203 ~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S 247 (476)
..|++++ +++|+.|..+++ .+.|.+.+|+++.||.||.|.+...
T Consensus 224 ~lg~~i~~~~~V~~i~~~~~-~v~v~~~~g~~~~ad~VI~a~p~~~ 268 (520)
T 1s3e_A 224 LLGDRVKLERPVIYIDQTRE-NVLVETLNHEMYEAKYVISAIPPTL 268 (520)
T ss_dssp HHGGGEESSCCEEEEECSSS-SEEEEETTSCEEEESEEEECSCGGG
T ss_pred HcCCcEEcCCeeEEEEECCC-eEEEEECCCeEEEeCEEEECCCHHH
Confidence 3478899 999999998776 4668888998899999999999765
No 108
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=99.08 E-value=6e-10 Score=117.09 Aligned_cols=144 Identities=22% Similarity=0.295 Sum_probs=87.9
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCC-----ccc-----------chHHHHh-----cCc--chhh
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNN-----YGV-----------WEDEFRD-----LGL--EGCI 162 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~-----~G~-----------~~~~l~~-----~~~--~~~~ 162 (476)
..+||||||||+|||++|+.|++.|++|+||||......+ -|+ +...+.+ -++ ...+
T Consensus 17 ~~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~~~~g~s~~a~GGi~a~~~~~~~ds~~~~~~dtl~~g~~l~d~~~v 96 (621)
T 2h88_A 17 HEFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEDDNWRWHFYDTVKGSDWLGDQDAI 96 (621)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCCHHHHHHHHHHHTTTCSCHHHH
T ss_pred ccCCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCCCCchhhCCCcEecCCCCCCCCHHHHHHHHHHhcCCCCCHHHH
Confidence 4589999999999999999999999999999997543211 111 1111111 011 1111
Q ss_pred hh---------hc-ccceeeeC--CCCCEE---ec-c--Cc-------c-----eecHHHHHHHHHHHHHHCCCeEE-EE
Q 011835 163 EH---------VW-RDTVVYID--EDEPIL---IG-R--AY-------G-----RVSRHLLHEELLRRCVESGVSYL-SS 211 (476)
Q Consensus 163 ~~---------~~-~~~~~~~~--~~~~~~---~~-~--~~-------~-----~i~r~~l~~~L~~~~~~~gv~i~-~~ 211 (476)
.. .| ....+.+. ...... ++ . ++ . ......+...|.+.+.+.||+++ ++
T Consensus 97 ~~l~~~s~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg~s~~~g~~~~~~R~~~~~d~tG~~l~~~L~~~~~~~gv~i~~~~ 176 (621)
T 2h88_A 97 HYMTEQAPAAVIELENYGMPFSRTEEGKIYQRAFGGQSLQFGKGGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEY 176 (621)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCBCTTSSBCEECCTTCBSTTTTSCBCCCEECSTTCHHHHHHHHHHHHHTTSCCEEEETE
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCCCceeccccCcccccccCCCcceeEEEecCCCHHHHHHHHHHHHHhCCCEEEEce
Confidence 00 00 00001111 000000 00 0 00 0 01345788899999988999999 99
Q ss_pred EEEEEEEcCCceEEEEe---cCce--EEECceEEEccCCCCCC
Q 011835 212 KVESITESTSGHRLVAC---EHDM--IVPCRLATVASGAASGK 249 (476)
Q Consensus 212 ~v~~i~~~~~~~~~v~~---~~g~--~i~a~~vV~A~G~~S~~ 249 (476)
.|+++..+++.+.+|.+ .+|+ .+.|+.||+|+|.++..
T Consensus 177 ~v~~Li~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~ 219 (621)
T 2h88_A 177 FALDLLMENGECRGVIALCIEDGTIHRFRAKNTVIATGGYGRT 219 (621)
T ss_dssp EEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCCCCGGG
T ss_pred EEEEEEEECCEEEEEEEEEcCCCcEEEEEcCeEEECCCccccc
Confidence 99999887664555654 3564 68999999999999864
No 109
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.06 E-value=5.2e-10 Score=114.17 Aligned_cols=139 Identities=16% Similarity=0.098 Sum_probs=84.8
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcC-----CcEEEECCCCCCCCCcccchHHHHhcCc-----chhhhhhccccee----
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLG-----LNVGLIGPDLPFTNNYGVWEDEFRDLGL-----EGCIEHVWRDTVV---- 171 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G-----~~V~liE~~~~~~~~~G~~~~~l~~~~~-----~~~~~~~~~~~~~---- 171 (476)
..+||+||||||+|+++|+.|++.| ++|+|||+...+.-..+.+. ....+ .+...........
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~~~~~---~~~~~~~~~~~~l~~~~~p~~~~~~~~ 105 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHGNTLV---SQSELQISFLKDLVSLRNPTSPYSFVN 105 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSGGGCC---SSCBCSSCTTSSSSTTTCTTCTTSHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcCCCCC---CCCcCCcchhhccccccCCCCCCChhH
Confidence 4589999999999999999999999 99999999875442111100 00000 0000000000000
Q ss_pred e-eCCCCCEE-eccCcceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcC--Cce--EEEEecCce----EEECceEE
Q 011835 172 Y-IDEDEPIL-IGRAYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITEST--SGH--RLVACEHDM----IVPCRLAT 240 (476)
Q Consensus 172 ~-~~~~~~~~-~~~~~~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~--~~~--~~v~~~~g~----~i~a~~vV 240 (476)
+ ...+.... .........+..+.+.|...+++.+++++ +++|++++.++ ++. +.|.+.+|. ++.+|.||
T Consensus 106 ~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lV 185 (463)
T 3s5w_A 106 YLHKHDRLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALV 185 (463)
T ss_dssp HHHHTTCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEE
T ss_pred hhhhcCceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEE
Confidence 0 00000000 00011124678888888888888899999 99999998762 223 366666664 89999999
Q ss_pred EccCCCC
Q 011835 241 VASGAAS 247 (476)
Q Consensus 241 ~A~G~~S 247 (476)
+|+|..+
T Consensus 186 lAtG~~p 192 (463)
T 3s5w_A 186 VSPGGTP 192 (463)
T ss_dssp ECCCCEE
T ss_pred ECCCCCC
Confidence 9999743
No 110
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=99.03 E-value=6.7e-10 Score=106.87 Aligned_cols=112 Identities=19% Similarity=0.236 Sum_probs=77.8
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEE-ECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccC
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLGLNVGL-IGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRA 184 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~l-iE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (476)
..+||+||||||||+++|+.|++.|++|+| +|+.. ....+ .. ... ...++ +.+
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~~~-~gG~~---~~---~~~------------~~~~~-------~~~ 56 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKGM-PGGQI---TS---SSE------------IENYP-------GVA 56 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECSSS-TTGGG---GG---CSC------------BCCST-------TCC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCC-CCcee---ee---ece------------eccCC-------CCC
Confidence 457999999999999999999999999999 99943 21111 00 000 00000 000
Q ss_pred cceecHHHHHHHHHHHHHHCCCeEEEEEEEEEEEcC--CceEEEEe-cCceEEECceEEEccCCCC
Q 011835 185 YGRVSRHLLHEELLRRCVESGVSYLSSKVESITEST--SGHRLVAC-EHDMIVPCRLATVASGAAS 247 (476)
Q Consensus 185 ~~~i~r~~l~~~L~~~~~~~gv~i~~~~v~~i~~~~--~~~~~v~~-~~g~~i~a~~vV~A~G~~S 247 (476)
..+....+...+.+.+.+.|++++..+|+++ .++ + .+.+.+ .++ ++.+|.||+|+|...
T Consensus 57 -~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i-~~~~~~-~~~v~~~~~~-~~~~d~lvlAtG~~~ 118 (315)
T 3r9u_A 57 -QVMDGISFMAPWSEQCMRFGLKHEMVGVEQI-LKNSDG-SFTIKLEGGK-TELAKAVIVCTGSAP 118 (315)
T ss_dssp -SCBCHHHHHHHHHHHHTTTCCEEECCCEEEE-EECTTS-CEEEEETTSC-EEEEEEEEECCCEEE
T ss_pred -CCCCHHHHHHHHHHHHHHcCcEEEEEEEEEE-ecCCCC-cEEEEEecCC-EEEeCEEEEeeCCCC
Confidence 1357788888999999999999993389998 655 4 455422 334 899999999999743
No 111
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=99.03 E-value=1.1e-09 Score=115.85 Aligned_cols=60 Identities=12% Similarity=0.098 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEe---cCce--EEECceEEEccCCCCCC
Q 011835 190 RHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVAC---EHDM--IVPCRLATVASGAASGK 249 (476)
Q Consensus 190 r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~---~~g~--~i~a~~vV~A~G~~S~~ 249 (476)
...+...|.+.+.+.||+++ ++.|+++..+++.+.+|.+ .+|+ .+.|+.||+|+|.++..
T Consensus 157 G~~l~~~L~~~a~~~gv~i~~~~~v~~L~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~ 222 (660)
T 2bs2_A 157 GHTMLFAVANECLKLGVSIQDRKEAIALIHQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYGRI 222 (660)
T ss_dssp HHHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECCCCCGGG
T ss_pred HHHHHHHHHHHHHhCCCEEEECcEEEEEEecCCEEEEEEEEECCCCcEEEEEcCEEEEccCcchhh
Confidence 35688889999988899999 9999999886664555544 4564 58999999999998854
No 112
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=99.01 E-value=2.5e-08 Score=101.29 Aligned_cols=37 Identities=35% Similarity=0.509 Sum_probs=33.4
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCC
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPF 142 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~ 142 (476)
..+||+|||||++||++|+.|++.|++|+|+|+....
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ 40 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRV 40 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCC
Confidence 4579999999999999999999999999999986543
No 113
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=99.01 E-value=1.3e-09 Score=115.49 Aligned_cols=145 Identities=18% Similarity=0.155 Sum_probs=85.0
Q ss_pred CcccEEEECCCHHHHHHHHHHH---H-cCCcEEEECCCCCCCCC-c--ccc-----------------h-HHHH-----h
Q 011835 106 GILDLVVIGCGPAGLALAAESA---K-LGLNVGLIGPDLPFTNN-Y--GVW-----------------E-DEFR-----D 155 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La---~-~G~~V~liE~~~~~~~~-~--G~~-----------------~-~~l~-----~ 155 (476)
..+||||||||+|||++|+.|+ + .|.+|+||||....... + |.+ . ..+. .
T Consensus 21 ~~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~~~s~~~a~G~~~~~~~~~~~~~~g~~ds~~~~~~~~~~~g 100 (643)
T 1jnr_A 21 VETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAVERSGAVAQGLSAINTYIDLTGRSERQNTLEDYVRYVTLDM 100 (643)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCTTTCSTTTTCEEEESCCCCSSSSBSCCCCHHHHHHHHHHHT
T ss_pred ccCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCCCCCcceecccccccchhhHHHhcCCCCCHHHHHHHHHHHh
Confidence 4589999999999999999999 6 89999999997642211 0 110 0 0000 0
Q ss_pred cCc--chhhhhh---------c-ccceeee--CCCCCEEe-ccCcceecHHHHHHHHHHHHHHC-CC-eEE-EEEEEEEE
Q 011835 156 LGL--EGCIEHV---------W-RDTVVYI--DEDEPILI-GRAYGRVSRHLLHEELLRRCVES-GV-SYL-SSKVESIT 217 (476)
Q Consensus 156 ~~~--~~~~~~~---------~-~~~~~~~--~~~~~~~~-~~~~~~i~r~~l~~~L~~~~~~~-gv-~i~-~~~v~~i~ 217 (476)
.++ ...+... | ....+.+ ........ +.....+....+...|.+.+.+. || +++ ++.|+++.
T Consensus 101 ~~l~d~~~v~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~~~~~~~g~~~~~~l~~~~~~~~gv~~i~~~~~v~~L~ 180 (643)
T 1jnr_A 101 MGLAREDLVADYARHVDGTVHLFEKWGLPIWKTPDGKYVREGQWQIMIHGESYKPIIAEAAKMAVGEENIYERVFIFELL 180 (643)
T ss_dssp TTCCCHHHHHHHHHHHHHHHHHHHHTTCCBCBCTTSCBCBSSSSCEEEEETTHHHHHHHHHHHHHCGGGEECSEEEEEEE
T ss_pred cCcCcHHHHHHHHHHHHHHHHHHHHcCCcceeCCCCCccCCCccccCCCcHHHHHHHHHHHHhcCCCcEEEecCEEEEEE
Confidence 111 1111000 0 0000111 11100000 00000122334667777777777 99 999 99999999
Q ss_pred EcCC---ceEEEEe---cCce--EEECceEEEccCCCCCCc
Q 011835 218 ESTS---GHRLVAC---EHDM--IVPCRLATVASGAASGKL 250 (476)
Q Consensus 218 ~~~~---~~~~v~~---~~g~--~i~a~~vV~A~G~~S~~~ 250 (476)
.+++ .+.+|.. .+|+ ++.|+.||+|||.++..+
T Consensus 181 ~~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~~~~y 221 (643)
T 1jnr_A 181 KDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGATLLF 221 (643)
T ss_dssp ECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCSSS
T ss_pred EcCCccceeEEEEEEEecCCcEEEEEcCEEEECCCcccccc
Confidence 8766 5666553 4554 689999999999998643
No 114
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=99.00 E-value=4.5e-10 Score=111.66 Aligned_cols=107 Identities=15% Similarity=0.182 Sum_probs=74.0
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCC-CcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccC
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTN-NYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRA 184 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~-~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (476)
...+|+|||||+||+++|..|+..+.+|+|||+.....- ..++ ...+..
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y~~~~l-~~~l~g----------------------------- 57 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPYYRPRL-NEIIAK----------------------------- 57 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCBCGGGH-HHHHHS-----------------------------
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCcccChh-hHHHcC-----------------------------
Confidence 346899999999999999999888999999998764321 1111 111110
Q ss_pred cceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCC
Q 011835 185 YGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAAS 247 (476)
Q Consensus 185 ~~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S 247 (476)
..+...+...+.+.+++.|++++ +++|++++.++. .|.+.+|+++.+|.||+|||+..
T Consensus 58 --~~~~~~l~~~~~~~~~~~~i~~~~~~~V~~id~~~~---~v~~~~g~~~~yd~lvlAtG~~p 116 (385)
T 3klj_A 58 --NKSIDDILIKKNDWYEKNNIKVITSEFATSIDPNNK---LVTLKSGEKIKYEKLIIASGSIA 116 (385)
T ss_dssp --CCCGGGTBSSCHHHHHHTTCEEECSCCEEEEETTTT---EEEETTSCEEECSEEEECCCEEE
T ss_pred --CCCHHHccCCCHHHHHHCCCEEEeCCEEEEEECCCC---EEEECCCCEEECCEEEEecCCCc
Confidence 00000111111344456899999 999999988765 57778888999999999999643
No 115
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.99 E-value=1.5e-09 Score=114.73 Aligned_cols=62 Identities=8% Similarity=-0.021 Sum_probs=47.8
Q ss_pred cHHHHHHHHHHHHHHC--CCeEE-EEEEEEEEEcCC---ceEEEEe---cCc--eEEECceEEEccCCCCCCc
Q 011835 189 SRHLLHEELLRRCVES--GVSYL-SSKVESITESTS---GHRLVAC---EHD--MIVPCRLATVASGAASGKL 250 (476)
Q Consensus 189 ~r~~l~~~L~~~~~~~--gv~i~-~~~v~~i~~~~~---~~~~v~~---~~g--~~i~a~~vV~A~G~~S~~~ 250 (476)
....+...|.+.+.+. ||+++ ++.|+++..+++ .+.+|.. .+| ..+.|+.||+|||..+..+
T Consensus 164 ~G~~i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG~g~~y 236 (662)
T 3gyx_A 164 NGESYKVIVAEAAKNALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANAMVVACGGAVNVY 236 (662)
T ss_dssp EETSHHHHHHHHHHHHHCTTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCSSS
T ss_pred CHHHHHHHHHHHHHhcCCCcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeCEEEECCCcccccc
Confidence 3456777888888776 99999 999999988766 5666644 344 3689999999999988543
No 116
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.96 E-value=2.8e-09 Score=108.73 Aligned_cols=135 Identities=19% Similarity=0.227 Sum_probs=76.0
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCc---c-cchH-HHHhcCcchhhhhhcccceeeeCCCCCEEe
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNY---G-VWED-EFRDLGLEGCIEHVWRDTVVYIDEDEPILI 181 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~---G-~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (476)
.+||+||||||||+++|+.|++.|++|+|||+. ..+..+ | +... .+...++...+........+. ......+
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~-~~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~--~~~~~~~ 79 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK-YWGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGIS--GEVTFDY 79 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEE--ECCEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC-CCCCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCC--CCCccCH
Confidence 479999999999999999999999999999997 322111 1 0000 011111101110000000010 0000000
Q ss_pred ccCcc--eecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCc--eEEECceEEEccCCCCC
Q 011835 182 GRAYG--RVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHD--MIVPCRLATVASGAASG 248 (476)
Q Consensus 182 ~~~~~--~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g--~~i~a~~vV~A~G~~S~ 248 (476)
..-.. .-....+...+.+.+.+.|++++ ++.+. .+++ .+.|.+.+| .++.+|.||+|||+.+.
T Consensus 80 ~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~~g~~~~---id~~-~v~V~~~~G~~~~~~~d~lViAtG~~~~ 147 (464)
T 2a8x_A 80 GIAYDRSRKVAEGRVAGVHFLMKKNKITEIHGYGTF---ADAN-TLLVDLNDGGTESVTFDNAIIATGSSTR 147 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEE---SSSS-EEEEEETTSCCEEEEEEEEEECCCEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE---ecCC-eEEEEeCCCceEEEEcCEEEECCCCCCC
Confidence 00000 00012355556677778899999 76543 2333 677777777 78999999999998764
No 117
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.95 E-value=7.7e-10 Score=112.06 Aligned_cols=105 Identities=18% Similarity=0.198 Sum_probs=77.2
Q ss_pred ccEEEECCCHHHHHHHHHHHH---cCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccC
Q 011835 108 LDLVVIGCGPAGLALAAESAK---LGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRA 184 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~---~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (476)
.||+|||||+||+++|..|++ .|++|+|||+.....-.. .+....
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~~~-~~~~~~------------------------------- 52 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVP-SNPWVG------------------------------- 52 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEECGG-GHHHHH-------------------------------
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcccC-Cccccc-------------------------------
Confidence 599999999999999999999 899999999876321100 000000
Q ss_pred cceecHHHHHHHHHHHHHHCCCeEEEEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCC
Q 011835 185 YGRVSRHLLHEELLRRCVESGVSYLSSKVESITESTSGHRLVACEHDMIVPCRLATVASGAAS 247 (476)
Q Consensus 185 ~~~i~r~~l~~~L~~~~~~~gv~i~~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S 247 (476)
.+......+...+.+.+++.||+++.++|+.++.+++ .|.+.+++++.+|.||+|+|+.+
T Consensus 53 ~g~~~~~~~~~~l~~~~~~~gv~~~~~~v~~id~~~~---~V~~~~g~~i~~d~lviAtG~~~ 112 (437)
T 3sx6_A 53 VGWKERDDIAFPIRHYVERKGIHFIAQSAEQIDAEAQ---NITLADGNTVHYDYLMIATGPKL 112 (437)
T ss_dssp HTSSCHHHHEEECHHHHHTTTCEEECSCEEEEETTTT---EEEETTSCEEECSEEEECCCCEE
T ss_pred cCccCHHHHHHHHHHHHHHCCCEEEEeEEEEEEcCCC---EEEECCCCEEECCEEEECCCCCc
Confidence 0123344455555667777899999779999987655 56778888899999999999765
No 118
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.95 E-value=4e-08 Score=99.83 Aligned_cols=57 Identities=14% Similarity=0.088 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHCCCeEE-EEEEEEEEEc--CCceEEEEecCceEEECceEEEccCCCCCC
Q 011835 192 LLHEELLRRCVESGVSYL-SSKVESITES--TSGHRLVACEHDMIVPCRLATVASGAASGK 249 (476)
Q Consensus 192 ~l~~~L~~~~~~~gv~i~-~~~v~~i~~~--~~~~~~v~~~~g~~i~a~~vV~A~G~~S~~ 249 (476)
.+.+.|.+.+++.|++++ +++|+++..+ +++.++|.+ +|+++.||.||.|.|.++..
T Consensus 243 ~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~~~~ 302 (453)
T 2bcg_G 243 ELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT-KLGTFKAPLVIADPTYFPEK 302 (453)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEE-TTEEEECSCEEECGGGCGGG
T ss_pred HHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEE-CCeEEECCEEEECCCccchh
Confidence 577788888888999999 9999999987 554556666 57889999999999988653
No 119
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.95 E-value=7.2e-10 Score=112.01 Aligned_cols=108 Identities=15% Similarity=0.204 Sum_probs=71.6
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCC--cEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccC
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGL--NVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRA 184 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~--~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (476)
.+||+|||||+||+++|..|++.|+ +|+|||+..... |.. ..+. ..+-. .. . .
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~--~~~--~~l~---------~~~~~------~~-~-----~ 58 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIP--HHL--PPLS---------KAYLA------GK-A-----T 58 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCC--BCS--GGGG---------TTTTT------TC-S-----C
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCC--CcC--CCCc---------HHHhC------CC-C-----C
Confidence 4799999999999999999999998 799999875322 100 0000 00000 00 0 0
Q ss_pred cceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCC
Q 011835 185 YGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAAS 247 (476)
Q Consensus 185 ~~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S 247 (476)
...+ ...+.+.+++.|++++ +++|+.++.++. .|.+.+|+++.+|.||+|||+.+
T Consensus 59 ~~~~-----~~~~~~~~~~~gv~~~~~~~v~~i~~~~~---~v~~~~g~~~~~d~lviAtG~~p 114 (431)
T 1q1r_A 59 AESL-----YLRTPDAYAAQNIQLLGGTQVTAINRDRQ---QVILSDGRALDYDRLVLATGGRP 114 (431)
T ss_dssp SGGG-----BSSCHHHHHHTTEEEECSCCEEEEETTTT---EEEETTSCEEECSEEEECCCEEE
T ss_pred hHHh-----cccCHHHHHhCCCEEEeCCEEEEEECCCC---EEEECCCCEEECCEEEEcCCCCc
Confidence 0000 0011234456899999 899999987654 56667888899999999999765
No 120
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.93 E-value=2e-09 Score=110.28 Aligned_cols=134 Identities=19% Similarity=0.199 Sum_probs=75.1
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCc---cc-chHH-HHhcCcchhhhhhcccceeeeCCCCCEEe
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNY---GV-WEDE-FRDLGLEGCIEHVWRDTVVYIDEDEPILI 181 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~---G~-~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (476)
.+||+||||||+|+++|+.|++.|++|+|||+....+..| |. .... +....+...+........+..... ..+
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~gi~~~~~--~~~ 82 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDVNGD--IKI 82 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGGGTEEECSC--EEE
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCccceeccHHHHHHHHHHHHHHHHHHHHHhcCcccCCC--Ccc
Confidence 5899999999999999999999999999999965443221 10 0000 000000000000000000100000 000
Q ss_pred ccCccee------cHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCc--eE------EECceEEEccCCC
Q 011835 182 GRAYGRV------SRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHD--MI------VPCRLATVASGAA 246 (476)
Q Consensus 182 ~~~~~~i------~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g--~~------i~a~~vV~A~G~~ 246 (476)
.+..+ ....+...+.+.+++.||+++ ++.+.. +++ .+.|.+.+| ++ +++|.||+|||+.
T Consensus 83 --~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~---~~~-~v~V~~~~G~~~~~~~~~~i~~d~lViAtGs~ 156 (478)
T 1v59_A 83 --NVANFQKAKDDAVKQLTGGIELLFKKNKVTYYKGNGSFE---DET-KIRVTPVDGLEGTVKEDHILDVKNIIVATGSE 156 (478)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEES---SSS-EEEEECCTTCTTCCSSCEEEEEEEEEECCCEE
T ss_pred --CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEc---cCC-eEEEEecCCCcccccccceEEeCEEEECcCCC
Confidence 00000 012344445666777899999 665541 333 567777666 46 9999999999977
Q ss_pred CC
Q 011835 247 SG 248 (476)
Q Consensus 247 S~ 248 (476)
+.
T Consensus 157 p~ 158 (478)
T 1v59_A 157 VT 158 (478)
T ss_dssp EC
T ss_pred CC
Confidence 63
No 121
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.93 E-value=3.5e-09 Score=108.63 Aligned_cols=133 Identities=18% Similarity=0.179 Sum_probs=74.3
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCc---cc-chHH-HHhcCcchhhhhhcccceeeeCCCCCEE
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNY---GV-WEDE-FRDLGLEGCIEHVWRDTVVYIDEDEPIL 180 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~---G~-~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (476)
..+||+||||||||+++|+.|++.|++|+|||+.......+ |. .... +....+...+.. .....+.+... .
T Consensus 5 ~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~ll~~~~~~~~~~~-~~~~gi~~~~~-~-- 80 (482)
T 1ojt_A 5 AEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRH-LAANGIKYPEP-E-- 80 (482)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHHHHHSHHHHHHHHHHHHHHHHHHH-GGGGTCCCCCC-C--
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCceeeecccchHHHHHHHHHHHHHHH-HHhCCcccCCC-c--
Confidence 35899999999999999999999999999999965433211 11 0000 000000000000 00000000000 0
Q ss_pred eccCcc-eec-----HHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCc------------eEEECceEEE
Q 011835 181 IGRAYG-RVS-----RHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHD------------MIVPCRLATV 241 (476)
Q Consensus 181 ~~~~~~-~i~-----r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g------------~~i~a~~vV~ 241 (476)
..+. .+. ...+...+.+.+.+.|++++ ++.+. .+++ .+.|.+.+| .++++|.||+
T Consensus 81 --~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~---~~~~-~v~v~~~~g~~~~~~~~~g~~~~i~ad~lVi 154 (482)
T 1ojt_A 81 --LDIDMLRAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQF---LDPH-HLEVSLTAGDAYEQAAPTGEKKIVAFKNCII 154 (482)
T ss_dssp --CCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEE---EETT-EEEEEEEEEEETTEEEEEEEEEEEEEEEEEE
T ss_pred --cCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEeeEEEE---ccCC-EEEEEecCCcccccccccCcceEEEcCEEEE
Confidence 0000 011 12234445666777899999 66443 2333 566665555 6799999999
Q ss_pred ccCCCCC
Q 011835 242 ASGAASG 248 (476)
Q Consensus 242 A~G~~S~ 248 (476)
|||+++.
T Consensus 155 AtGs~p~ 161 (482)
T 1ojt_A 155 AAGSRVT 161 (482)
T ss_dssp CCCEEEC
T ss_pred CCCCCCC
Confidence 9998764
No 122
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.93 E-value=7.4e-10 Score=109.45 Aligned_cols=105 Identities=20% Similarity=0.259 Sum_probs=68.0
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcc
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYG 186 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (476)
..||+||||||||+++|..|++.| +|+|||+.....-........+. + .
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~~~~~~l~~~~~--g-------~--------------------- 56 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPYYSKPMLSHYIA--G-------F--------------------- 56 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCCCCSTTHHHHHT--T-------S---------------------
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCccccchhHHHHh--C-------C---------------------
Confidence 359999999999999999999999 99999987632211011011000 0 0
Q ss_pred eecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCC
Q 011835 187 RVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAAS 247 (476)
Q Consensus 187 ~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S 247 (476)
++...+...+.+.+++.|++++ +++|+.++.+.. .|. .+|+++.+|.||+|||+..
T Consensus 57 -~~~~~~~~~~~~~~~~~~v~~~~g~~v~~id~~~~---~V~-~~g~~~~~d~lViATGs~p 113 (367)
T 1xhc_A 57 -IPRNRLFPYSLDWYRKRGIEIRLAEEAKLIDRGRK---VVI-TEKGEVPYDTLVLATGARA 113 (367)
T ss_dssp -SCGGGGCSSCHHHHHHHTEEEECSCCEEEEETTTT---EEE-ESSCEEECSEEEECCCEEE
T ss_pred -CCHHHhccCCHHHHHhCCcEEEECCEEEEEECCCC---EEE-ECCcEEECCEEEECCCCCC
Confidence 0000000011233456799999 889999987643 344 5677899999999999654
No 123
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.93 E-value=1.9e-09 Score=110.16 Aligned_cols=135 Identities=19% Similarity=0.210 Sum_probs=76.0
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCc---cc-chHHHH-hcCcchhhhhhcccceeeeCCCCCEE
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNY---GV-WEDEFR-DLGLEGCIEHVWRDTVVYIDEDEPIL 180 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~---G~-~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (476)
..+||+||||||||+++|+.|++.|++|+|||+....+..| |. ....+. ...+...+........+.... ..
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~~~---~~ 81 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSN---VE 81 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEESC---EE
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcccCC---Cc
Confidence 45899999999999999999999999999999986543322 11 000000 000000000000000000000 00
Q ss_pred eccCcceec-----HHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCc--eEEECceEEEccCCCCC
Q 011835 181 IGRAYGRVS-----RHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHD--MIVPCRLATVASGAASG 248 (476)
Q Consensus 181 ~~~~~~~i~-----r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g--~~i~a~~vV~A~G~~S~ 248 (476)
..... .+. ...+...+.+.+.+.|++++ ++.+ .+ +.+ .+.|.+.+| .++++|.||+|||+.+.
T Consensus 82 ~~~~~-~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~-~~--~~~-~~~v~~~~G~~~~i~~d~lIiAtGs~p~ 152 (470)
T 1dxl_A 82 IDLAA-MMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGK-FV--SPS-EISVDTIEGENTVVKGKHIIIATGSDVK 152 (470)
T ss_dssp ECHHH-HHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEE-EE--ETT-EEEECCSSSCCEEEECSEEEECCCEEEC
T ss_pred cCHHH-HHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEE-Ee--cCC-EEEEEeCCCceEEEEcCEEEECCCCCCC
Confidence 00000 011 12344455666677899999 5543 33 333 566766677 78999999999997663
No 124
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.92 E-value=3e-08 Score=106.72 Aligned_cols=42 Identities=19% Similarity=0.104 Sum_probs=36.4
Q ss_pred CCCeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccCCC
Q 011835 204 SGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAA 246 (476)
Q Consensus 204 ~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~ 246 (476)
.|++|+ +++|++|..+++ .+.|.+.+|+++.||.||+|+...
T Consensus 542 ~gl~I~l~t~V~~I~~~~~-~v~V~~~~G~~i~Ad~VIvA~P~~ 584 (776)
T 4gut_A 542 EGLDIQLKSPVQCIDYSGD-EVQVTTTDGTGYSAQKVLVTVPLA 584 (776)
T ss_dssp TTSCEESSCCEEEEECSSS-SEEEEETTCCEEEESEEEECCCHH
T ss_pred hCCcEEcCCeeEEEEEcCC-EEEEEECCCcEEEcCEEEECCCHH
Confidence 488999 999999998877 577888899889999999999643
No 125
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.92 E-value=4.6e-09 Score=107.95 Aligned_cols=138 Identities=14% Similarity=0.213 Sum_probs=73.6
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCc---ccch-HHHHh-cCcchhhhhhcccceeeeCCCCCEE
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNY---GVWE-DEFRD-LGLEGCIEHVWRDTVVYIDEDEPIL 180 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~---G~~~-~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (476)
..+||+||||||||+++|+.|++.|++|+|||+....+..| |..+ ..+.. ...............+... .....
T Consensus 24 ~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~~g~~~~-~~~~~ 102 (491)
T 3urh_A 24 MAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLEALGVEVA-NPKLN 102 (491)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGGGTEECC-CCEEC
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCccccccchhhHHHHHHHHHHHHHHhhHhhcCcccC-CCccC
Confidence 35899999999999999999999999999999866543322 1100 00000 0000000000011111100 00000
Q ss_pred eccCcc--eecHHHHHHHHHHHHHHCCCeEEEEEEEEEEEcCCceEEEEecCc--eEEECceEEEccCCCC
Q 011835 181 IGRAYG--RVSRHLLHEELLRRCVESGVSYLSSKVESITESTSGHRLVACEHD--MIVPCRLATVASGAAS 247 (476)
Q Consensus 181 ~~~~~~--~i~r~~l~~~L~~~~~~~gv~i~~~~v~~i~~~~~~~~~v~~~~g--~~i~a~~vV~A~G~~S 247 (476)
+..-.. .-....+...+...+.+.+++++...+..+ +.+ .+.|...+| .++.+|.||+|+|+..
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~--~~~-~~~v~~~~g~~~~~~~d~lViATGs~p 170 (491)
T 3urh_A 103 LQKMMAHKDATVKSNVDGVSFLFKKNKIDGFQGTGKVL--GQG-KVSVTNEKGEEQVLEAKNVVIATGSDV 170 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEEC--SSS-EEEEECTTSCEEEEECSEEEECCCEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEe--cCC-EEEEEeCCCceEEEEeCEEEEccCCCC
Confidence 000000 000122334455566778999984444432 223 577777776 5799999999999664
No 126
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.91 E-value=2.4e-09 Score=108.96 Aligned_cols=108 Identities=19% Similarity=0.160 Sum_probs=70.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHc--CCcEEEECCCCCCCC-CcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccC
Q 011835 108 LDLVVIGCGPAGLALAAESAKL--GLNVGLIGPDLPFTN-NYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRA 184 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~--G~~V~liE~~~~~~~-~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (476)
+||+|||||+||+++|..|++. |++|+|||+.....- ..++.. .+. +.
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~~~~~-~~~---------------------~~------- 53 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSGGLSA-YFN---------------------HT------- 53 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC--------------------------------------
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCccchh-hhc---------------------CC-------
Confidence 5999999999999999999999 999999999774331 111100 000 00
Q ss_pred cceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEe-cCceEEECceEEEccCCCC
Q 011835 185 YGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVAC-EHDMIVPCRLATVASGAAS 247 (476)
Q Consensus 185 ~~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~-~~g~~i~a~~vV~A~G~~S 247 (476)
..+...+...+.+.+.+.|++++ +++|+.++.+++ .+.+.. .++.++.+|.||+|+|+..
T Consensus 54 --~~~~~~~~~~~~~~~~~~gi~~~~~~~V~~id~~~~-~v~v~~~~~~~~~~~d~lviAtG~~p 115 (452)
T 3oc4_A 54 --INELHEARYITEEELRRQKIQLLLNREVVAMDVENQ-LIAWTRKEEQQWYSYDKLILATGASQ 115 (452)
T ss_dssp ---------CCCCHHHHHHTTEEEECSCEEEEEETTTT-EEEEEETTEEEEEECSEEEECCCCCB
T ss_pred --CCCHHHhhcCCHHHHHHCCCEEEECCEEEEEECCCC-EEEEEecCceEEEEcCEEEECCCccc
Confidence 00001111112344566899998 999999988766 455542 2456899999999999754
No 127
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.90 E-value=2.8e-09 Score=110.25 Aligned_cols=138 Identities=20% Similarity=0.133 Sum_probs=72.9
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCC----Ccc-cchH-------HHHhc-Ccchhhhhhcccceee
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTN----NYG-VWED-------EFRDL-GLEGCIEHVWRDTVVY 172 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~----~~G-~~~~-------~l~~~-~~~~~~~~~~~~~~~~ 172 (476)
..+||+||||||||+++|+.|++.|++|+|||+..+... .+| .+.. .+... .....+. ......+.
T Consensus 31 ~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~~-~~~~~g~~ 109 (519)
T 3qfa_A 31 YDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQ-DSRNYGWK 109 (519)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHH-HHHHTTBC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHHHHH-HHHhcCcc
Confidence 468999999999999999999999999999998642211 122 1110 00000 0000000 00000011
Q ss_pred eCCCCCEEeccCcceec--HHHHHHHHHHHHHHCCCeEEEEEEEEEEEcCCceEEEEecCce--EEECceEEEccCCCC
Q 011835 173 IDEDEPILIGRAYGRVS--RHLLHEELLRRCVESGVSYLSSKVESITESTSGHRLVACEHDM--IVPCRLATVASGAAS 247 (476)
Q Consensus 173 ~~~~~~~~~~~~~~~i~--r~~l~~~L~~~~~~~gv~i~~~~v~~i~~~~~~~~~v~~~~g~--~i~a~~vV~A~G~~S 247 (476)
........+..-..... ...+...+...+...||+++...+..++. + .+.|...+|+ ++.+|.||+|||+..
T Consensus 110 ~~~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~~i~g~a~~~d~--~-~v~v~~~~g~~~~i~~d~lViATGs~p 185 (519)
T 3qfa_A 110 VEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAYGQFIGP--H-RIKATNNKGKEKIYSAERFLIATGERP 185 (519)
T ss_dssp CCSSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEET--T-EEEEECTTCCCCEEEEEEEEECCCEEE
T ss_pred cCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeC--C-EEEEEcCCCCEEEEECCEEEEECCCCc
Confidence 10000000000000000 01233334445667899999555555543 2 5666666664 799999999999654
No 128
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.90 E-value=3.7e-09 Score=108.46 Aligned_cols=135 Identities=15% Similarity=0.055 Sum_probs=73.3
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCc---cc-chHHHHhc-CcchhhhhhcccceeeeCCCCCE
Q 011835 105 NGILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNY---GV-WEDEFRDL-GLEGCIEHVWRDTVVYIDEDEPI 179 (476)
Q Consensus 105 ~~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~---G~-~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~ 179 (476)
...+||+||||||+|+++|+.|++.|++|+|||+.. .+..+ |. ....+-.. .....+. ......+..... ..
T Consensus 24 ~~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~-~GG~~~~~gcip~k~l~~~a~~~~~~~-~~~~~g~~~~~~-~~ 100 (484)
T 3o0h_A 24 SFDFDLFVIGSGSGGVRAARLAGALGKRVAIAEEYR-IGGTCVIRGCVPKKLYFYASQYAQEFS-KSIGFGWKYADP-IF 100 (484)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHH-HHGGGTBCCCCC-EE
T ss_pred cCCCCEEEECcCHHHHHHHHHHHhCcCEEEEEeCCC-CCCceeccCccccHHHHHHHHHHHHHH-HHHhCCcccCCC-cc
Confidence 346899999999999999999999999999999943 22111 11 00000000 0000000 000000000000 00
Q ss_pred EeccCcce--ecHHHHHHHHHHHHHHCCCeEEEEEEEEEEEcCCceEEEEec-CceEEECceEEEccCCCC
Q 011835 180 LIGRAYGR--VSRHLLHEELLRRCVESGVSYLSSKVESITESTSGHRLVACE-HDMIVPCRLATVASGAAS 247 (476)
Q Consensus 180 ~~~~~~~~--i~r~~l~~~L~~~~~~~gv~i~~~~v~~i~~~~~~~~~v~~~-~g~~i~a~~vV~A~G~~S 247 (476)
.+..-... -....+...+.+.+.+.|++++...+..++. . .+.+. ++.++.+|.+|+|+|+..
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~~--~---~v~v~~~~~~~~~d~lviAtG~~p 166 (484)
T 3o0h_A 101 NWEKLVAAKNKEISRLEGLYREGLQNSNVHIYESRAVFVDE--H---TLELSVTGERISAEKILIATGAKI 166 (484)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEET--T---EEEETTTCCEEEEEEEEECCCEEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeC--C---EEEEecCCeEEEeCEEEEccCCCc
Confidence 00000000 0112345556666778899999556666642 2 34444 677899999999999654
No 129
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.90 E-value=4.8e-09 Score=106.74 Aligned_cols=131 Identities=15% Similarity=0.130 Sum_probs=73.9
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCc---cc-chHHHH-hcCcchhhhhhcccceeeeCCCCCEEe
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNY---GV-WEDEFR-DLGLEGCIEHVWRDTVVYIDEDEPILI 181 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~---G~-~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (476)
++||+||||||||+++|..|++.|++|+|||+. .....+ |. ....+- ...+...+. ......+.+. . ...
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~~~~g~~p~k~l~~~~~~~~~~~-~~~~~g~~~~-~--~~~ 77 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVCLNVGCIPSKALISASHRYEQAK-HSEEMGIKAE-N--VTI 77 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHTSHHHHHHHHHHHHHHHHHH-TCGGGTEECC-S--CEE
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcCcCcCchhhHHHHHHHHHHHHHH-HHHhcCcccC-C--Ccc
Confidence 479999999999999999999999999999997 322111 11 000000 000000000 0000001000 0 000
Q ss_pred ccCcceecH-----HHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCc-eEEECceEEEccCCCC
Q 011835 182 GRAYGRVSR-----HLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHD-MIVPCRLATVASGAAS 247 (476)
Q Consensus 182 ~~~~~~i~r-----~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g-~~i~a~~vV~A~G~~S 247 (476)
.... .+.+ ..+...+.+.+.+.|++++ ++.+ .+ +.+ .+.|.+.+| .++.+|.||+|||+.+
T Consensus 78 ~~~~-~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~-~i--d~~-~v~V~~~~G~~~i~~d~lViATGs~p 145 (455)
T 1ebd_A 78 DFAK-VQEWKASVVKKLTGGVEGLLKGNKVEIVKGEAY-FV--DAN-TVRVVNGDSAQTYTFKNAIIATGSRP 145 (455)
T ss_dssp CHHH-HHHHHHHHHHHHHHHHHHHHHTTTCEEEESEEE-EE--ETT-EEEEEETTEEEEEECSEEEECCCEEE
T ss_pred CHHH-HHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEE-Ec--cCC-eEEEEeCCCcEEEEeCEEEEecCCCC
Confidence 0000 0111 2244556667778899999 5543 33 333 577777777 6899999999999765
No 130
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.90 E-value=2.3e-09 Score=109.46 Aligned_cols=128 Identities=21% Similarity=0.227 Sum_probs=75.0
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCc---cc-chHHHHhcCcchhhhhhcccceeeeCCCCCEEec
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNY---GV-WEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIG 182 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~---G~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (476)
.+||+||||||+|+++|+.|++.|++|+|||+....+..| |. ....+... ......+..... ....
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~~gciPsk~l~~~---a~~~~~~~~~~~---~~~~---- 73 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLYSGCVPSKTVREV---IQTAWRLTNIAN---VKIP---- 73 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHHHSHHHHHHHHHH---HHHHHHHHHHHC---SCCC----
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccccCCCchHHHHHH---HHHHHHHHhccc---CCCC----
Confidence 5899999999999999999999999999999766544322 10 00000000 000000000000 0000
Q ss_pred cCcce-e-cHHH---HH--HHHHHHHHHCCCeEEEEEEEEEEEcCCceEEEEecCceE--EECceEEEccCCCC
Q 011835 183 RAYGR-V-SRHL---LH--EELLRRCVESGVSYLSSKVESITESTSGHRLVACEHDMI--VPCRLATVASGAAS 247 (476)
Q Consensus 183 ~~~~~-i-~r~~---l~--~~L~~~~~~~gv~i~~~~v~~i~~~~~~~~~v~~~~g~~--i~a~~vV~A~G~~S 247 (476)
..+.. . .... +. ..+.+.+.+.|++++..+++.++. + .+.|...+|++ +.+|.||+|+|+..
T Consensus 74 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~v~~id~--~-~~~V~~~~g~~~~~~~d~lviAtG~~p 144 (466)
T 3l8k_A 74 LDFSTVQDRKDYVQELRFKQHKRNMSQYETLTFYKGYVKIKDP--T-HVIVKTDEGKEIEAETRYMIIASGAET 144 (466)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEESEEEEEEET--T-EEEEEETTSCEEEEEEEEEEECCCEEE
T ss_pred cCHHHHHHHHHhheeccccchHHHHHHhCCCEEEEeEEEEecC--C-eEEEEcCCCcEEEEecCEEEECCCCCc
Confidence 00000 0 0111 22 444555566799999446777653 3 57788888877 99999999999643
No 131
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.89 E-value=1.2e-09 Score=109.99 Aligned_cols=109 Identities=15% Similarity=0.159 Sum_probs=72.8
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCc--EEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEecc
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLGLN--VGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGR 183 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G~~--V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (476)
..+||+|||||+||+++|..|++.|++ |+|||+.....-.. ..+.. .... ..
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~----~~l~~--------~~~~-------~~------- 61 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYER----PPLSK--------EYLA-------RE------- 61 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBCS----GGGGT--------TTTT-------TS-------
T ss_pred CCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcCc----ccCCH--------HHHc-------CC-------
Confidence 457999999999999999999999988 99999876422110 00000 0000 00
Q ss_pred CcceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCC
Q 011835 184 AYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAAS 247 (476)
Q Consensus 184 ~~~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S 247 (476)
.....+.....+.+.+.|++++ +++|+.++.+.. .|.+.+|.++.+|.+|+|+|+..
T Consensus 62 ----~~~~~~~~~~~~~~~~~~i~~~~~~~v~~id~~~~---~v~~~~g~~~~~d~lvlAtG~~~ 119 (415)
T 3lxd_A 62 ----KTFERICIRPAQFWEDKAVEMKLGAEVVSLDPAAH---TVKLGDGSAIEYGKLIWATGGDP 119 (415)
T ss_dssp ----SCSGGGBSSCHHHHHHTTEEEEETCCEEEEETTTT---EEEETTSCEEEEEEEEECCCEEC
T ss_pred ----CCHHHhccCCHHHHHHCCcEEEeCCEEEEEECCCC---EEEECCCCEEEeeEEEEccCCcc
Confidence 0000011111344556899999 889999987654 56778888999999999999654
No 132
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.88 E-value=2.2e-09 Score=110.34 Aligned_cols=35 Identities=43% Similarity=0.542 Sum_probs=32.5
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
.++||+||||||||+++|+.|++.|++|+|||+..
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~ 39 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVE 39 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecc
Confidence 46899999999999999999999999999999843
No 133
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.88 E-value=6.3e-09 Score=106.52 Aligned_cols=138 Identities=19% Similarity=0.200 Sum_probs=73.8
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCC--cc-cchH-------HHHhc-CcchhhhhhcccceeeeC
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNN--YG-VWED-------EFRDL-GLEGCIEHVWRDTVVYID 174 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~--~G-~~~~-------~l~~~-~~~~~~~~~~~~~~~~~~ 174 (476)
.++||+||||||+|+++|+.|++.|++|+|||+....... +| .+.. .+... .....+........+...
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~~~~~g~~~~ 81 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLHGISTG 81 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSBCCSHHHHHHSHHHHHHHHHHHHHHHHHHTTSGGGTEECS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCCCcCCccccccHHHHHHHHHHHHHHHHHHHHHHhcCcccC
Confidence 3589999999999999999999999999999997643322 22 1100 00000 000000000011111110
Q ss_pred CCCCEEeccCccee--cHHHHHHHHHHHHHHCCCeEEEEEEEEEEEcCCceEEEEecCc--eEEECceEEEccCCCC
Q 011835 175 EDEPILIGRAYGRV--SRHLLHEELLRRCVESGVSYLSSKVESITESTSGHRLVACEHD--MIVPCRLATVASGAAS 247 (476)
Q Consensus 175 ~~~~~~~~~~~~~i--~r~~l~~~L~~~~~~~gv~i~~~~v~~i~~~~~~~~~v~~~~g--~~i~a~~vV~A~G~~S 247 (476)
.....+..-.... -...+...+...+++.|++++...+..+ +.+ .+.|...+| .++.+|.||+|+|+..
T Consensus 82 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~--~~~-~~~v~~~~g~~~~~~~d~lvlAtG~~p 154 (476)
T 3lad_A 82 -EVAIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEGHGKLL--AGK-KVEVTAADGSSQVLDTENVILASGSKP 154 (476)
T ss_dssp -CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESEEEEC--STT-CEEEECTTSCEEEECCSCEEECCCEEE
T ss_pred -CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEe--cCC-EEEEEcCCCceEEEEcCEEEEcCCCCC
Confidence 0000000000000 0122334444556677999984444443 233 567777777 5799999999999654
No 134
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=98.86 E-value=1.4e-10 Score=129.23 Aligned_cols=155 Identities=14% Similarity=0.139 Sum_probs=94.1
Q ss_pred CccceeeecccCCCCccccccc-cccchhcCCcceeeeccccCcchhhhhhhccCCCCC--CCCCCcccEEEECCCHHHH
Q 011835 44 SYKVTARATSNNAGSESCVAVK-EEDYIKAGGSQLVFVQMQQNKSMDKQSKLADKLPPI--SIGNGILDLVVIGCGPAGL 120 (476)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~dVvIIGgG~aGl 120 (476)
.|+||++-.|+. .|++.. .+++|.++..+.+..+.......... ....++.. .+....+||+||||||||+
T Consensus 127 grvCp~~~~Ce~----~C~~~~~~~~pv~I~~le~~~~d~~~~~~~~~~--~~p~~~~~~~~~~~~~~~VvVIGgGpAGl 200 (1025)
T 1gte_A 127 GMVCPTSDLCVG----GCNLYATEEGSINIGGLQQFASEVFKAMNIPQI--RNPCLPSQEKMPEAYSAKIALLGAGPASI 200 (1025)
T ss_dssp HHHCCGGGSGGG----GCGGGGSTTCCCCHHHHHHHHHHHHHHHTCCCC--CCTTSCCGGGSCGGGGCCEEEECCSHHHH
T ss_pred cCCCCChhhHHh----hCccCCCCCCCccHhHHHHHHHHHHHHhCCccc--cCccccccccCCccCCCEEEEECccHHHH
Confidence 589999989998 999875 36788888777655442111000000 00000000 0012457999999999999
Q ss_pred HHHHHHHHcCC-cEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcceecHHHHHHHHHH
Q 011835 121 ALAAESAKLGL-NVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGRVSRHLLHEELLR 199 (476)
Q Consensus 121 ~~A~~La~~G~-~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~ 199 (476)
++|..|++.|+ +|+|||+....+.. + ..++ +...+... +.....+
T Consensus 201 ~aA~~L~~~G~~~Vtv~E~~~~~GG~-------~-~~~i-------------------------p~~~~~~~-~~~~~~~ 246 (1025)
T 1gte_A 201 SCASFLARLGYSDITIFEKQEYVGGL-------S-TSEI-------------------------PQFRLPYD-VVNFEIE 246 (1025)
T ss_dssp HHHHHHHHTTCCCEEEEESSSSCSTH-------H-HHTS-------------------------CTTTSCHH-HHHHHHH
T ss_pred HHHHHHHhcCCCcEEEEeCCCCCCcc-------c-cccC-------------------------CcccCCHH-HHHHHHH
Confidence 99999999999 79999986532211 0 0000 00012222 3333456
Q ss_pred HHHHCCCeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccCCC
Q 011835 200 RCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAA 246 (476)
Q Consensus 200 ~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~ 246 (476)
.+++.||+++ ++.+.. . .+.+.++.++.+|.||+|+|++
T Consensus 247 ~~~~~gv~~~~~~~v~~-----~---~v~~~~~~~~~~d~vvlAtGa~ 286 (1025)
T 1gte_A 247 LMKDLGVKIICGKSLSE-----N---EITLNTLKEEGYKAAFIGIGLP 286 (1025)
T ss_dssp HHHTTTCEEEESCCBST-----T---SBCHHHHHHTTCCEEEECCCCC
T ss_pred HHHHCCcEEEcccEecc-----c---eEEhhhcCccCCCEEEEecCCC
Confidence 6778899998 766521 1 2333444457899999999985
No 135
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.86 E-value=1.1e-08 Score=105.83 Aligned_cols=127 Identities=22% Similarity=0.253 Sum_probs=73.6
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCC----CCcccchHHHHhcCc-chhhhhhc---------------
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFT----NNYGVWEDEFRDLGL-EGCIEHVW--------------- 166 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~----~~~G~~~~~l~~~~~-~~~~~~~~--------------- 166 (476)
+|||+||||||||+++|+.+++.|.+|+|||+..+.. ..+| ..|+ .+|++...
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~~~~~~k~~lG-------GtCln~GCIPsK~L~~aa~~~~~~~~~~ 114 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKPSSQGTKWGIG-------GTCVNVGCVPKKLMHYAGHMGSIFKLDS 114 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCCCTTCCCCCSS-------HHHHHHSHHHHHHHHHHHHHHHHHHHTG
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeccccccccccCCCC-------CcccccchHHHHHHHHHHHHHHHHHhhh
Confidence 5999999999999999999999999999999865422 1122 1222 22332110
Q ss_pred ccceeeeCCCCCEEeccCcc-eecH-----HHHHHHHHHHHHHCCCeEEEEEEEEEEEcCCceEEEEec----CceEEEC
Q 011835 167 RDTVVYIDEDEPILIGRAYG-RVSR-----HLLHEELLRRCVESGVSYLSSKVESITESTSGHRLVACE----HDMIVPC 236 (476)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~-~i~r-----~~l~~~L~~~~~~~gv~i~~~~v~~i~~~~~~~~~v~~~----~g~~i~a 236 (476)
....+... .....+. .+.+ ..+...+...+++.||+++......+.. + .+.|... +++++++
T Consensus 115 ~~~Gi~~~-----~~~~d~~~~~~~~~~~v~~l~~~~~~~l~~~~V~~i~G~a~f~~~--~-~v~V~~~~~~~~~~~i~a 186 (542)
T 4b1b_A 115 KAYGWKFD-----NLKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKVKYINGLAKLKDK--N-TVSYYLKGDLSKEETVTG 186 (542)
T ss_dssp GGGTEEEE-----EEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEEEET--T-EEEEEEC--CCCEEEEEE
T ss_pred HhcCcccC-----cccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEEcCC--C-cceEeecccCCceEEEee
Confidence 00000000 0000111 0111 2344445556778899999544444432 2 4455433 3368999
Q ss_pred ceEEEccCCCCC
Q 011835 237 RLATVASGAASG 248 (476)
Q Consensus 237 ~~vV~A~G~~S~ 248 (476)
|.+|+|||+...
T Consensus 187 ~~iiIATGs~P~ 198 (542)
T 4b1b_A 187 KYILIATGCRPH 198 (542)
T ss_dssp EEEEECCCEEEC
T ss_pred eeEEeccCCCCC
Confidence 999999997653
No 136
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.86 E-value=7e-10 Score=112.09 Aligned_cols=103 Identities=21% Similarity=0.239 Sum_probs=69.0
Q ss_pred cEEEECCCHHHHHHHHHHHHcC--CcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcc
Q 011835 109 DLVVIGCGPAGLALAAESAKLG--LNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYG 186 (476)
Q Consensus 109 dVvIIGgG~aGl~~A~~La~~G--~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (476)
+|||||||+||+++|..|++.+ ++|+|||+.....-..+ +..... |.
T Consensus 4 ~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~~~p~-l~~v~~--g~---------------------------- 52 (430)
T 3hyw_A 4 HVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPA-FPHLAM--GW---------------------------- 52 (430)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGG-HHHHHH--TC----------------------------
T ss_pred cEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCccCcc-HHHHhc--CC----------------------------
Confidence 6999999999999999999876 78999998753211100 000000 00
Q ss_pred eecHHHHHHHHHHHHHHCCCeEEEEEEEEEEEcCCceEEEEecCceEEECceEEEccCCC
Q 011835 187 RVSRHLLHEELLRRCVESGVSYLSSKVESITESTSGHRLVACEHDMIVPCRLATVASGAA 246 (476)
Q Consensus 187 ~i~r~~l~~~L~~~~~~~gv~i~~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~ 246 (476)
++...+..-+.+.+++.||+++..+|++++.+.. .|++++|+++.+|.+|+|+|+.
T Consensus 53 -~~~~~i~~~~~~~~~~~gv~~i~~~v~~Id~~~~---~V~~~~g~~i~YD~LViAtG~~ 108 (430)
T 3hyw_A 53 -RKFEDISVPLAPLLPKFNIEFINEKAESIDPDAN---TVTTQSGKKIEYDYLVIATGPK 108 (430)
T ss_dssp -SCGGGSEEESTTTGGGGTEEEECSCEEEEETTTT---EEEETTCCEEECSEEEECCCCE
T ss_pred -CCHHHhhhcHHHHHHHCCcEEEEeEEEEEECCCC---EEEECCCCEEECCEEEEeCCCC
Confidence 0000000001222345799999668999998765 5778899999999999999964
No 137
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.84 E-value=6.1e-09 Score=105.80 Aligned_cols=106 Identities=17% Similarity=0.200 Sum_probs=67.6
Q ss_pred cccEEEECCCHHHHHHHHHHHHc--CCcEEEECCCCCCCC-CcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEecc
Q 011835 107 ILDLVVIGCGPAGLALAAESAKL--GLNVGLIGPDLPFTN-NYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGR 183 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~--G~~V~liE~~~~~~~-~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (476)
.+||+|||||+||+++|..|++. |++|+|||+...... .+++ ...+ .
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~~~----------p~~~-----------~--------- 52 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPCGI----------PYVV-----------E--------- 52 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC-----------------------------------------
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCcCC----------cccc-----------C---------
Confidence 36999999999999999999998 889999999763321 1111 0000 0
Q ss_pred CcceecHHHHHHHHHHHH-HHCCCeEE-EEEEEEEEEcCCceEEEEecCc-eEEECceEEEccCCCC
Q 011835 184 AYGRVSRHLLHEELLRRC-VESGVSYL-SSKVESITESTSGHRLVACEHD-MIVPCRLATVASGAAS 247 (476)
Q Consensus 184 ~~~~i~r~~l~~~L~~~~-~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g-~~i~a~~vV~A~G~~S 247 (476)
+......+.....+.+ ++.|++++ +++|++++.+ ...|.+.++ .++.+|.||+|+|+..
T Consensus 53 --~~~~~~~~~~~~~~~~~~~~gi~v~~~~~v~~i~~~---~~~v~~~~g~~~~~~d~lviAtG~~p 114 (449)
T 3kd9_A 53 --GLSTPDKLMYYPPEVFIKKRGIDLHLNAEVIEVDTG---YVRVRENGGEKSYEWDYLVFANGASP 114 (449)
T ss_dssp ---------------CTHHHHTTCEEETTCEEEEECSS---EEEEECSSSEEEEECSEEEECCCEEE
T ss_pred --CCCCHHHhhhcCHHHHHHhcCcEEEecCEEEEEecC---CCEEEECCceEEEEcCEEEECCCCCC
Confidence 0001111222222333 57899999 8899988653 356666777 4899999999999644
No 138
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.84 E-value=9.8e-10 Score=111.02 Aligned_cols=105 Identities=20% Similarity=0.212 Sum_probs=70.6
Q ss_pred ccEEEECCCHHHHHHHHHHHH--cCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCc
Q 011835 108 LDLVVIGCGPAGLALAAESAK--LGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAY 185 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~--~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (476)
.||+|||||+||+++|..|++ .|++|+|||+.....-... +..... +.
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~~-~~~~~~--g~--------------------------- 52 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPA-FPHLAM--GW--------------------------- 52 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGG-HHHHHH--TC---------------------------
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCCC-cchhcc--Cc---------------------------
Confidence 589999999999999999999 7899999999764221100 000000 00
Q ss_pred ceecHHHHHHHHHHHHHHCCCeEEEEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCC
Q 011835 186 GRVSRHLLHEELLRRCVESGVSYLSSKVESITESTSGHRLVACEHDMIVPCRLATVASGAAS 247 (476)
Q Consensus 186 ~~i~r~~l~~~L~~~~~~~gv~i~~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S 247 (476)
.+...+...+.+.+++.|++++..+|+.++.+.. .|.+.+++++.+|.||+|+|+..
T Consensus 53 --~~~~~~~~~~~~~~~~~gv~~~~~~v~~id~~~~---~v~~~~g~~i~~d~liiAtG~~~ 109 (430)
T 3h28_A 53 --RKFEDISVPLAPLLPKFNIEFINEKAESIDPDAN---TVTTQSGKKIEYDYLVIATGPKL 109 (430)
T ss_dssp --SCGGGSEEESTTTGGGGTEEEECSCEEEEETTTT---EEEETTCCEEECSEEEECCCCEE
T ss_pred --cCHHHHHHHHHHHHHhcCCEEEEEEEEEEECCCC---EEEECCCcEEECCEEEEcCCccc
Confidence 0000011112233445799999558999887654 56777888899999999999764
No 139
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.84 E-value=3e-09 Score=106.80 Aligned_cols=105 Identities=14% Similarity=0.244 Sum_probs=71.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCc--EEEECCCCCCCCC-cccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLN--VGLIGPDLPFTNN-YGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRA 184 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~--V~liE~~~~~~~~-~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (476)
.+|+|||||+||+++|..|++.|++ |+|||+.....-. ..+....+.. ... ..
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y~~~~l~~~~~~g---------~~~-------~~-------- 58 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYDRPSLSKAVLDG---------SLE-------RP-------- 58 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBCSGGGGTHHHHT---------SSS-------SC--------
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCcCCccccHHHhCC---------CCC-------HH--------
Confidence 3899999999999999999999988 9999987643211 0110001100 000 00
Q ss_pred cceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCC
Q 011835 185 YGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAAS 247 (476)
Q Consensus 185 ~~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S 247 (476)
.+.+ ..+.+.+.|++++ +++|+.++.+.. .|.+.+|+++.+|.||+|+|+..
T Consensus 59 --~~~~------~~~~~~~~~i~~~~~~~v~~id~~~~---~v~~~~g~~~~~d~lvlAtG~~p 111 (410)
T 3ef6_A 59 --PILA------EADWYGEARIDMLTGPEVTALDVQTR---TISLDDGTTLSADAIVIATGSRA 111 (410)
T ss_dssp --CBSS------CTTHHHHTTCEEEESCCEEEEETTTT---EEEETTSCEEECSEEEECCCEEE
T ss_pred --HhcC------CHHHHHHCCCEEEeCCEEEEEECCCC---EEEECCCCEEECCEEEEccCCcc
Confidence 0000 0223456799999 889999987654 56778888899999999999654
No 140
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.83 E-value=1.2e-08 Score=104.24 Aligned_cols=133 Identities=16% Similarity=0.149 Sum_probs=73.6
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCc---cc-chHHH-HhcCcchhhhhhcccceeeeCCCCCEEe
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNY---GV-WEDEF-RDLGLEGCIEHVWRDTVVYIDEDEPILI 181 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~---G~-~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (476)
++||+||||||||+++|+.|++.|++|+|||+....+..| |. ....+ ....+...+........+...... ..
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~~~~~--~~ 79 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGEGV--TM 79 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEECGGGC--EE
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCcccCCCC--cc
Confidence 3799999999999999999999999999999976443221 11 00000 000000000000000000000000 00
Q ss_pred ccCcce-ec-----HHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCc--eEEECceEEEccCCCC
Q 011835 182 GRAYGR-VS-----RHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHD--MIVPCRLATVASGAAS 247 (476)
Q Consensus 182 ~~~~~~-i~-----r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g--~~i~a~~vV~A~G~~S 247 (476)
.+.. +. ...+...+.+.+.+.|++++ ++ +..++ .+ .+.|...+| .++.+|.||+|+|+..
T Consensus 80 --~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~-~~~i~--~~-~~~v~~~~G~~~~~~~d~lviAtG~~p 148 (468)
T 2qae_A 80 --DSAKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGE-GSFET--AH-SIRVNGLDGKQEMLETKKTIIATGSEP 148 (468)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEE-EEEEE--TT-EEEEEETTSCEEEEEEEEEEECCCEEE
T ss_pred --CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEE-EEEee--CC-EEEEEecCCceEEEEcCEEEECCCCCc
Confidence 0000 11 11233445566677899999 55 43443 33 567777777 7899999999999754
No 141
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.83 E-value=6.9e-09 Score=106.34 Aligned_cols=109 Identities=13% Similarity=0.143 Sum_probs=70.2
Q ss_pred cccEEEECCCHHHHHHHHHHHHc--CCcEEEECCCCCCC-CCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEecc
Q 011835 107 ILDLVVIGCGPAGLALAAESAKL--GLNVGLIGPDLPFT-NNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGR 183 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~--G~~V~liE~~~~~~-~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (476)
.+||+|||||+||+++|..|++. |.+|+|||+..... ..+|+. ..+.. .. ...
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~-~~~~~---------~~-------~~~------- 91 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQCGLP-YVISG---------AI-------AST------- 91 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGGGHH-HHHTT---------SS-------SCG-------
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCCCcc-hhhcC---------Cc-------CCH-------
Confidence 36999999999999999999997 89999999876432 111210 00000 00 000
Q ss_pred CcceecHHHHHHHHHHHH-HHCCCeEE-EEEEEEEEEcCCceEEEEe-cCce--EEECceEEEccCCCC
Q 011835 184 AYGRVSRHLLHEELLRRC-VESGVSYL-SSKVESITESTSGHRLVAC-EHDM--IVPCRLATVASGAAS 247 (476)
Q Consensus 184 ~~~~i~r~~l~~~L~~~~-~~~gv~i~-~~~v~~i~~~~~~~~~v~~-~~g~--~i~a~~vV~A~G~~S 247 (476)
...+.+ ..+.+ +..|++++ +++|+.++.+++ .+.+.. .+|+ ++.+|.||+|+|+..
T Consensus 92 -~~l~~~------~~~~~~~~~gv~~~~~~~v~~i~~~~~-~v~v~~~~~g~~~~~~~d~lviAtG~~p 152 (480)
T 3cgb_A 92 -EKLIAR------NVKTFRDKYGIDAKVRHEVTKVDTEKK-IVYAEHTKTKDVFEFSYDRLLIATGVRP 152 (480)
T ss_dssp -GGGBSS------CHHHHHHTTCCEEESSEEEEEEETTTT-EEEEEETTTCCEEEEECSEEEECCCEEE
T ss_pred -HHhhhc------CHHHHHhhcCCEEEeCCEEEEEECCCC-EEEEEEcCCCceEEEEcCEEEECCCCcc
Confidence 000111 12233 34599999 899999987766 555554 3465 799999999999654
No 142
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.81 E-value=1.5e-08 Score=103.55 Aligned_cols=134 Identities=13% Similarity=0.157 Sum_probs=74.1
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCc---cc-chHHHH-hcCcchhhh-hhcccceeeeCCCCCE
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNY---GV-WEDEFR-DLGLEGCIE-HVWRDTVVYIDEDEPI 179 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~---G~-~~~~l~-~~~~~~~~~-~~~~~~~~~~~~~~~~ 179 (476)
..+||+||||||||+++|..|++.|++|+|||+....+..| |. ....+- ...+...+. .......+.. . ..
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~~~--~-~~ 81 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEM--S-EV 81 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTTEEE--S-CE
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCcccc--C-CC
Confidence 45899999999999999999999999999999976443221 11 000000 000000000 0000000000 0 00
Q ss_pred EeccCcce-ec-----HHHHHHHHHHHHHHCCCeEEEEEEEEEEEcCCceEEEEecC-c-eEEECceEEEccCCCC
Q 011835 180 LIGRAYGR-VS-----RHLLHEELLRRCVESGVSYLSSKVESITESTSGHRLVACEH-D-MIVPCRLATVASGAAS 247 (476)
Q Consensus 180 ~~~~~~~~-i~-----r~~l~~~L~~~~~~~gv~i~~~~v~~i~~~~~~~~~v~~~~-g-~~i~a~~vV~A~G~~S 247 (476)
.. .+.. +. ...+...+.+.+.+.|++++...+..+ +.+ .+.|.+.+ + +++.+|.||+|||+.+
T Consensus 82 ~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~--~~~-~~~v~~~~gg~~~~~~d~lViAtGs~p 152 (474)
T 1zmd_A 82 RL--NLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKIT--GKN-QVTATKADGGTQVIDTKNILIATGSEV 152 (474)
T ss_dssp EE--CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEEE--ETT-EEEEECTTSCEEEEEEEEEEECCCEEE
T ss_pred cc--CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEe--cCC-EEEEEecCCCcEEEEeCEEEECCCCCC
Confidence 00 0110 11 112334456667778999993334444 233 56777776 4 5799999999999765
No 143
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.81 E-value=7e-09 Score=105.30 Aligned_cols=108 Identities=12% Similarity=0.143 Sum_probs=69.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHc--CCcEEEECCCCCCCC-CcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccC
Q 011835 108 LDLVVIGCGPAGLALAAESAKL--GLNVGLIGPDLPFTN-NYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRA 184 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~--G~~V~liE~~~~~~~-~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (476)
+||+|||||+||+++|..|++. |++|+|||+...... .+++ .. .+.....
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~-----~~-----~~~~~~~----------------- 53 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFLSAGM-----QL-----YLEGKVK----------------- 53 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSBCGGGH-----HH-----HHTTSSC-----------------
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCcccccc-----hh-----hhcCccC-----------------
Confidence 3899999999999999999998 999999998764321 1111 00 0000000
Q ss_pred cceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEe-cCce--EEECceEEEccCCCC
Q 011835 185 YGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVAC-EHDM--IVPCRLATVASGAAS 247 (476)
Q Consensus 185 ~~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~-~~g~--~i~a~~vV~A~G~~S 247 (476)
+...+...+.+.+.+.|++++ ++.|+.++.+++ .+.+.. .+|+ ++.+|.||+|+|+..
T Consensus 54 ----~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~~~~-~v~~~~~~~g~~~~~~~d~lviAtG~~p 115 (447)
T 1nhp_A 54 ----DVNSVRYMTGEKMESRGVNVFSNTEITAIQPKEH-QVTVKDLVSGEERVENYDKLIISPGAVP 115 (447)
T ss_dssp ----CGGGSBSCCHHHHHHTTCEEEETEEEEEEETTTT-EEEEEETTTCCEEEEECSEEEECCCEEE
T ss_pred ----CHHHhhcCCHHHHHHCCCEEEECCEEEEEeCCCC-EEEEEecCCCceEEEeCCEEEEcCCCCc
Confidence 000000011233456799998 999999987665 455543 3354 489999999999654
No 144
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.81 E-value=1.6e-08 Score=100.46 Aligned_cols=98 Identities=14% Similarity=0.245 Sum_probs=80.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcce
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (476)
.+|+|||||+.|+.+|..|++.|.+|+|+|+.......
T Consensus 146 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~------------------------------------------ 183 (384)
T 2v3a_A 146 RRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPG------------------------------------------ 183 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhc------------------------------------------
Confidence 58999999999999999999999999999986532111
Q ss_pred ecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCCC
Q 011835 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASG 248 (476)
Q Consensus 188 i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S~ 248 (476)
.....+.+.+.+.+++.||+++ +++|++++.+++ .+.|.+.+|+++.+|.||.|+|..+.
T Consensus 184 ~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~-~~~v~~~~g~~i~~d~vv~a~G~~p~ 244 (384)
T 2v3a_A 184 LLHPAAAKAVQAGLEGLGVRFHLGPVLASLKKAGE-GLEAHLSDGEVIPCDLVVSAVGLRPR 244 (384)
T ss_dssp TSCHHHHHHHHHHHHTTTCEEEESCCEEEEEEETT-EEEEEETTSCEEEESEEEECSCEEEC
T ss_pred ccCHHHHHHHHHHHHHcCCEEEeCCEEEEEEecCC-EEEEEECCCCEEECCEEEECcCCCcC
Confidence 1123466777788888999999 999999988766 57788888989999999999997764
No 145
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.81 E-value=8.1e-09 Score=104.98 Aligned_cols=110 Identities=12% Similarity=0.085 Sum_probs=69.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHc--CCcEEEECCCCCCCC-CcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccC
Q 011835 108 LDLVVIGCGPAGLALAAESAKL--GLNVGLIGPDLPFTN-NYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRA 184 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~--G~~V~liE~~~~~~~-~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (476)
+||+|||||++|+++|..|++. |++|+|||+...... .+++. ..+.. ... .
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~-~~~~g---------~~~----~------------ 54 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISFLSCGIA-LYLGK---------EIK----N------------ 54 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCBCGGGHH-HHHTT---------CBG----G------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCcccccch-hhhcC---------Ccc----c------------
Confidence 4899999999999999999998 999999998764321 11110 00000 000 0
Q ss_pred cceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEec-C--ceEEECceEEEccCCCC
Q 011835 185 YGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACE-H--DMIVPCRLATVASGAAS 247 (476)
Q Consensus 185 ~~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~-~--g~~i~a~~vV~A~G~~S 247 (476)
++...+...+.+.+.+.|++++ +++|+.++.+++ .+.+... + +.++.+|.||+|+|+..
T Consensus 55 ---~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~~~~-~v~v~~~~~g~~~~~~~d~lviAtGs~p 117 (452)
T 2cdu_A 55 ---NDPRGLFYSSPEELSNLGANVQMRHQVTNVDPETK-TIKVKDLITNEEKTEAYDKLIMTTGSKP 117 (452)
T ss_dssp ---GCGGGGBSCCHHHHHHTTCEEEESEEEEEEEGGGT-EEEEEETTTCCEEEEECSEEEECCCEEE
T ss_pred ---CCHHHhhhcCHHHHHHcCCEEEeCCEEEEEEcCCC-EEEEEecCCCceEEEECCEEEEccCCCc
Confidence 0000011111334456899998 899999987665 4444431 2 46799999999999654
No 146
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.81 E-value=8.1e-09 Score=105.30 Aligned_cols=134 Identities=16% Similarity=0.113 Sum_probs=71.8
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCc---cc-chHHHHh-cCcchhhhhhcccceeeeCCCCCEE
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNY---GV-WEDEFRD-LGLEGCIEHVWRDTVVYIDEDEPIL 180 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~---G~-~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (476)
..+||+||||||+|+++|+.|++.|++|+|||+.. .+..| |. ....+.. ......+. ......+..... ...
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk~~-~GG~~~~~gcip~k~l~~~~~~~~~~~-~~~~~g~~~~~~-~~~ 80 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAALGKKVAIAEEFR-YGGTCVIRGCVPKKLYVYASQFAEHFE-DAAGFGWTVGES-RFD 80 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHH-HGGGGTEEECCC-EEC
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCEEEEEeCCC-CCCcccccCchhhHHHHHHHHHHHHHH-HHHhcCcccCCC-CcC
Confidence 45899999999999999999999999999999933 22111 11 0000000 00000000 001111111100 000
Q ss_pred eccCccee--cHHHHHHHHHHHHHHCCCeEEEEEEEEEEEcCCceEEEEe-cCceEEECceEEEccCCCC
Q 011835 181 IGRAYGRV--SRHLLHEELLRRCVESGVSYLSSKVESITESTSGHRLVAC-EHDMIVPCRLATVASGAAS 247 (476)
Q Consensus 181 ~~~~~~~i--~r~~l~~~L~~~~~~~gv~i~~~~v~~i~~~~~~~~~v~~-~~g~~i~a~~vV~A~G~~S 247 (476)
+..-.... ....+...+.+.+.+.|++++..++..++ . ..+.+ .++.++.+|.+|+|+|+..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~---~--~~v~~~~~~~~~~~d~lviAtG~~p 145 (463)
T 4dna_A 81 WAKLVAAKEQEIARLEGLYRKGLANAGAEILDTRAELAG---P--NTVKLLASGKTVTAERIVIAVGGHP 145 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEESS---S--SEEEETTTTEEEEEEEEEECCCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEee---C--CEEEEecCCeEEEeCEEEEecCCCc
Confidence 00000000 01234455666677789999855555542 2 23444 4678899999999999654
No 147
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.80 E-value=4.2e-09 Score=108.21 Aligned_cols=109 Identities=15% Similarity=0.097 Sum_probs=70.2
Q ss_pred cccEEEECCCHHHHHHHHHHHHcC---CcEEEECCCCCCCC-CcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEec
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLG---LNVGLIGPDLPFTN-NYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIG 182 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G---~~V~liE~~~~~~~-~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (476)
.+||+|||||+||+++|..|++.| ++|+|||+...... .+++. ..+.. . . ....
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~-~~~~~---------~-----~--~~~~----- 92 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGAGMA-LWIGE---------Q-----I--AGPE----- 92 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGGGHH-HHHTT---------S-----S--SCSG-----
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCccccccc-hhhcC---------c-----c--CCHH-----
Confidence 479999999999999999999998 99999998764321 11110 00000 0 0 0000
Q ss_pred cCcceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEec-CceEEECceEEEccCCCC
Q 011835 183 RAYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACE-HDMIVPCRLATVASGAAS 247 (476)
Q Consensus 183 ~~~~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~-~g~~i~a~~vV~A~G~~S 247 (476)
. + ...+.+.+.+.|++++ +++|+.++.+++ .+.+... ++.++.+|.||+|+|+..
T Consensus 93 ---~-~-----~~~~~~~~~~~gv~v~~~~~v~~i~~~~~-~v~v~~~g~~~~~~~d~lviAtG~~p 149 (490)
T 2bc0_A 93 ---G-L-----FYSDKEELESLGAKVYMESPVQSIDYDAK-TVTALVDGKNHVETYDKLIFATGSQP 149 (490)
T ss_dssp ---G-G-----BSCCHHHHHHTTCEEETTCCEEEEETTTT-EEEEEETTEEEEEECSEEEECCCEEE
T ss_pred ---H-h-----hhcCHHHHHhCCCEEEeCCEEEEEECCCC-EEEEEeCCcEEEEECCEEEECCCCCc
Confidence 0 0 0001233456899998 999999987665 4444321 235799999999999654
No 148
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.80 E-value=1.1e-08 Score=107.58 Aligned_cols=111 Identities=17% Similarity=0.152 Sum_probs=73.4
Q ss_pred CcccEEEECCCHHHHHHHHHHHHc--CCcEEEECCCCCCC-CCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEec
Q 011835 106 GILDLVVIGCGPAGLALAAESAKL--GLNVGLIGPDLPFT-NNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIG 182 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~--G~~V~liE~~~~~~-~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (476)
...||+|||||+||+++|..|++. |++|+|||+..... ..+++.. .+. ..+.
T Consensus 35 ~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~~~~~~lp~-~~~---------g~~~--------------- 89 (588)
T 3ics_A 35 GSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYISFANCGLPY-YIG---------GVIT--------------- 89 (588)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHH-HHT---------TSSC---------------
T ss_pred cCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCccccCCCCch-hhc---------CcCC---------------
Confidence 447999999999999999999999 89999999976432 1111100 000 0000
Q ss_pred cCcceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEe-cCce--EEECceEEEccCCCC
Q 011835 183 RAYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVAC-EHDM--IVPCRLATVASGAAS 247 (476)
Q Consensus 183 ~~~~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~-~~g~--~i~a~~vV~A~G~~S 247 (476)
-....+...+...+++.|++++ +++|+.++.+++ .+.+.. .+|. ++.+|.||+|+|+..
T Consensus 90 -----~~~~~~~~~~~~~~~~~gi~v~~~~~V~~id~~~~-~v~v~~~~~g~~~~~~~d~lviAtG~~p 152 (588)
T 3ics_A 90 -----ERQKLLVQTVERMSKRFNLDIRVLSEVVKINKEEK-TITIKNVTTNETYNEAYDVLILSPGAKP 152 (588)
T ss_dssp -----CGGGGBSSCHHHHHHHTTCEEECSEEEEEEETTTT-EEEEEETTTCCEEEEECSEEEECCCEEE
T ss_pred -----ChHHhhccCHHHHHHhcCcEEEECCEEEEEECCCC-EEEEeecCCCCEEEEeCCEEEECCCCCC
Confidence 0001111223444567899998 999999998766 455543 3454 789999999999643
No 149
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.79 E-value=1e-08 Score=105.07 Aligned_cols=34 Identities=41% Similarity=0.422 Sum_probs=31.8
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEECCC
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPD 139 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~ 139 (476)
..+||+||||||||+++|+.|++.|++|+|||+.
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~ 41 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVLNGARVACLDFV 41 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEec
Confidence 4689999999999999999999999999999963
No 150
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.78 E-value=4.6e-08 Score=99.79 Aligned_cols=132 Identities=19% Similarity=0.212 Sum_probs=71.1
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCc---cc-chHHHHhcCcchhhhhhcccceee--eCCCCCE
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNY---GV-WEDEFRDLGLEGCIEHVWRDTVVY--IDEDEPI 179 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~---G~-~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~ 179 (476)
..+||+||||||+|+++|+.|++.|++|+|||++ ..+..| |. +...+-.. ..+.........+ ......
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~GG~~~~~g~ip~k~l~~~---~~~~~~~~~~~~~~g~~~~~~- 77 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG-TIGGTCVNVGCVPSKIMIRA---AHIAHLRRESPFDGGIAATVP- 77 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-STTHHHHHHSHHHHHHHHHH---HHHHHHHHCCTTTTTSCCCCC-
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC-CCCccccCCCccchHHHHHH---HHHHHHHhhhhhcCCccCCCC-
Confidence 3579999999999999999999999999999987 332211 10 00000000 0000000000000 000000
Q ss_pred EeccCccee-c-HHHHHHHH-----HHHHHHC-CCeEEEEEEEEEEEcCCceEEEEecCc--eEEECceEEEccCCCC
Q 011835 180 LIGRAYGRV-S-RHLLHEEL-----LRRCVES-GVSYLSSKVESITESTSGHRLVACEHD--MIVPCRLATVASGAAS 247 (476)
Q Consensus 180 ~~~~~~~~i-~-r~~l~~~L-----~~~~~~~-gv~i~~~~v~~i~~~~~~~~~v~~~~g--~~i~a~~vV~A~G~~S 247 (476)
...+..+ . ...+...| .+.+.+. |++++..+++.++. + .+.|.+.+| .++++|.||+|+|+..
T Consensus 78 --~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~~~~~~~--~-~~~v~~~~g~~~~~~~d~lviAtGs~p 150 (467)
T 1zk7_A 78 --TIDRSKLLAQQQARVDELRHAKYEGILGGNPAITVVHGEARFKDD--Q-SLTVRLNEGGERVVMFDRCLVATGASP 150 (467)
T ss_dssp --CCCHHHHHHHHHHHHHHHHHHHTHHHHTTCTTEEEEEEEEEEEET--T-EEEEEETTSSEEEEECSEEEECCCEEE
T ss_pred --ccCHHHHHHHHHHHHHHHhhhhHHHHHhccCCeEEEEEEEEEccC--C-EEEEEeCCCceEEEEeCEEEEeCCCCC
Confidence 0000001 0 11111222 2334556 99999445766642 3 577777777 7899999999999643
No 151
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.78 E-value=7.8e-09 Score=103.50 Aligned_cols=106 Identities=13% Similarity=0.185 Sum_probs=70.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCC--cEEEECCCCCCCCC-cccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGL--NVGLIGPDLPFTNN-YGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRA 184 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~--~V~liE~~~~~~~~-~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (476)
.||+|||||+||+++|..|++.|+ +|+|||+.....-. ..+... .+.. ... ..
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~-------------~l~~------~~~-----~~ 57 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQRPPLSKA-------------YLKS------GGD-----PN 57 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSBCSGGGGTG-------------GGGS------CCC-----TT
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCCCCccCCHH-------------HHCC------CCC-----HH
Confidence 489999999999999999999999 89999987632211 000000 0000 000 00
Q ss_pred cceecHHHHHHHHHHHHHHCCCeEEEEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCC
Q 011835 185 YGRVSRHLLHEELLRRCVESGVSYLSSKVESITESTSGHRLVACEHDMIVPCRLATVASGAAS 247 (476)
Q Consensus 185 ~~~i~r~~l~~~L~~~~~~~gv~i~~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S 247 (476)
....+ ..+.+.+.|++++.++|+.++.+.. .|.+.+|.++.+|.||+|+|+..
T Consensus 58 -~~~~~------~~~~~~~~~i~~~~~~v~~id~~~~---~v~~~~g~~~~~d~lvlAtG~~p 110 (404)
T 3fg2_P 58 -SLMFR------PEKFFQDQAIELISDRMVSIDREGR---KLLLASGTAIEYGHLVLATGARN 110 (404)
T ss_dssp -SSBSS------CHHHHHHTTEEEECCCEEEEETTTT---EEEESSSCEEECSEEEECCCEEE
T ss_pred -HccCC------CHHHHHhCCCEEEEEEEEEEECCCC---EEEECCCCEEECCEEEEeeCCCc
Confidence 00111 1234456799988788888887654 56778888899999999999643
No 152
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.78 E-value=9.7e-09 Score=102.64 Aligned_cols=103 Identities=17% Similarity=0.171 Sum_probs=69.8
Q ss_pred cEEEECCCHHHHHHHHHHHHcC--CcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcc
Q 011835 109 DLVVIGCGPAGLALAAESAKLG--LNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYG 186 (476)
Q Consensus 109 dVvIIGgG~aGl~~A~~La~~G--~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (476)
+|||||||+||+++|..|++.| .+|+|||+....... +.+...+.. ... ..
T Consensus 4 kVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~-p~~~~v~~g--~~~------------------------~~ 56 (401)
T 3vrd_B 4 KVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTC-YMSNEVIGG--DRE------------------------LA 56 (401)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECS-TTHHHHHHT--SSC------------------------GG
T ss_pred EEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCc-cCHHHHhcC--CCC------------------------HH
Confidence 7999999999999999999876 589999987642211 111111110 000 00
Q ss_pred eecHHHHHHHHHHHHHHCCCeEEEEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCC
Q 011835 187 RVSRHLLHEELLRRCVESGVSYLSSKVESITESTSGHRLVACEHDMIVPCRLATVASGAAS 247 (476)
Q Consensus 187 ~i~r~~l~~~L~~~~~~~gv~i~~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S 247 (476)
.+.+. .+.+.+.||+++..+|++++.+.. .|.+.+|.++.+|.+|+|+|+..
T Consensus 57 ~~~~~------~~~~~~~gv~~i~~~v~~id~~~~---~v~~~~g~~i~yd~LviAtG~~~ 108 (401)
T 3vrd_B 57 SLRVG------YDGLRAHGIQVVHDSALGIDPDKK---LVKTAGGAEFAYDRCVVAPGIDL 108 (401)
T ss_dssp GGEEC------SHHHHHTTCEEECSCEEEEETTTT---EEEETTSCEEECSEEEECCCEEE
T ss_pred HHhhC------HHHHHHCCCEEEEeEEEEEEccCc---EEEecccceeecceeeeccCCcc
Confidence 01000 122345799999778999988765 56778888999999999999754
No 153
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.78 E-value=7.7e-09 Score=106.73 Aligned_cols=51 Identities=6% Similarity=0.036 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccC
Q 011835 191 HLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASG 244 (476)
Q Consensus 191 ~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G 244 (476)
..+.+.|.+.+.+.|++++ +++|+.+..+++ .+++.+|+++.||.||.+.-
T Consensus 222 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~---~v~~~~G~~~~ad~vI~t~P 273 (513)
T 4gde_A 222 GGIWIAVANTLPKEKTRFGEKGKVTKVNANNK---TVTLQDGTTIGYKKLVSTMA 273 (513)
T ss_dssp HHHHHHHHHTSCGGGEEESGGGCEEEEETTTT---EEEETTSCEEEEEEEEECSC
T ss_pred HHHHHHHHHHHHhcCeeeecceEEEEEEccCC---EEEEcCCCEEECCEEEECCC
Confidence 4577777777888899999 999999998765 45678999999999998764
No 154
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.78 E-value=3.8e-09 Score=105.96 Aligned_cols=104 Identities=20% Similarity=0.238 Sum_probs=70.2
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCc--EEEECCCCCCCCC-cccchHHHHhcCcchhhhhhcccceeeeCCCCCEEec
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLGLN--VGLIGPDLPFTNN-YGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIG 182 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G~~--V~liE~~~~~~~~-~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (476)
..+||+|||||+||+++|..|++.|.+ |+|||+.....-. .+.....+.. . . .. .
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~~~~~~~~~---------~-----~-~~-~------ 63 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYDRPPLSKDFMAH---------G-----D-AE-K------ 63 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCCBCSGGGGTHHHHH---------C-----C-GG-G------
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCcccCCCCCHHHhCC---------C-----c-hh-h------
Confidence 347999999999999999999999984 9999987632211 1110001100 0 0 00 0
Q ss_pred cCcceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCC
Q 011835 183 RAYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAAS 247 (476)
Q Consensus 183 ~~~~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S 247 (476)
..+. .+.+.|++++ +++|++++.+.. .|.+.+|+++.+|.||+|+|+..
T Consensus 64 ---~~~~----------~~~~~~v~~~~~~~v~~i~~~~~---~v~~~~g~~~~~d~lviAtG~~~ 113 (408)
T 2gqw_A 64 ---IRLD----------CKRAPEVEWLLGVTAQSFDPQAH---TVALSDGRTLPYGTLVLATGAAP 113 (408)
T ss_dssp ---SBCC----------CTTSCSCEEEETCCEEEEETTTT---EEEETTSCEEECSEEEECCCEEE
T ss_pred ---hhHH----------HHHHCCCEEEcCCEEEEEECCCC---EEEECCCCEEECCEEEECCCCCC
Confidence 0011 2345799999 888999987543 56667888899999999999754
No 155
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.77 E-value=1.6e-08 Score=103.35 Aligned_cols=113 Identities=13% Similarity=0.119 Sum_probs=62.5
Q ss_pred ccEEEECCCHHHHHHHHHHHHc--CCcEEEECCCCCCC-CCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccC
Q 011835 108 LDLVVIGCGPAGLALAAESAKL--GLNVGLIGPDLPFT-NNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRA 184 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~--G~~V~liE~~~~~~-~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (476)
.||+|||||+||+++|..|++. |++|+|||+..... ..+|+ ...+...+.. .
T Consensus 4 ~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~~~~~gl----------~~~~~g~~~~-------~-------- 58 (472)
T 3iwa_A 4 KHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRISYGGCGI----------PYYVSGEVSN-------I-------- 58 (472)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC----------------------------------------------
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCccccccccc----------chhhcCCCCc-------h--------
Confidence 5999999999999999999999 99999999976432 11111 0000000000 0
Q ss_pred ccee--cHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEe-cCce--EEECceEEEccCCCC
Q 011835 185 YGRV--SRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVAC-EHDM--IVPCRLATVASGAAS 247 (476)
Q Consensus 185 ~~~i--~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~-~~g~--~i~a~~vV~A~G~~S 247 (476)
..+ .+..+...+.......|++++ +++|+.++.+.+ .+.+.. .+|. ++.+|.||+|+|+..
T Consensus 59 -~~~~~~~~~~~~~~~~~~~~~gi~~~~~~~V~~id~~~~-~v~~~~~~~g~~~~~~~d~lviAtG~~p 125 (472)
T 3iwa_A 59 -ESLQATPYNVVRDPEFFRINKDVEALVETRAHAIDRAAH-TVEIENLRTGERRTLKYDKLVLALGSKA 125 (472)
T ss_dssp -----------------------CEEECSEEEEEEETTTT-EEEEEETTTCCEEEEECSEEEECCCEEE
T ss_pred -HHhccccchhccCHHHHhhhcCcEEEECCEEEEEECCCC-EEEEeecCCCCEEEEECCEEEEeCCCCc
Confidence 000 000122222333345799998 999999988766 455543 2343 789999999999643
No 156
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.77 E-value=3.2e-08 Score=101.32 Aligned_cols=135 Identities=15% Similarity=0.123 Sum_probs=73.2
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCc---cc-chHHHHhcCcchhhhhhcccce-eeeCCCCC--
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNY---GV-WEDEFRDLGLEGCIEHVWRDTV-VYIDEDEP-- 178 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~---G~-~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~-- 178 (476)
..+||+||||||+|+++|+.|++.|++|+|||+.. .+..| |. ....+.. ...+........ .-+.....
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~~-~GG~~~n~gciP~k~l~~---~~~~~~~~~~~~~~g~~~~~~~~ 85 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGAKTLLVEAKA-LGGTCVNVGCVPKKVMWY---ASDLATRVSHANEYGLYQNLPLD 85 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESSC-TTHHHHHHSHHHHHHHHH---HHHHHHHHTTTTTTTBSTTSCCS
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCCC-cCCcCcccCcHHHHHHHH---HHHHHHHHHhHHhcCcccccccc
Confidence 35899999999999999999999999999999973 22111 10 0000000 000000000000 00000000
Q ss_pred E-EeccCccee-c-----HHHHHHHHHHHHHHCCCeEEEEEEEEEEEcCCceEEEEecCce--EEECceEEEccCCCC
Q 011835 179 I-LIGRAYGRV-S-----RHLLHEELLRRCVESGVSYLSSKVESITESTSGHRLVACEHDM--IVPCRLATVASGAAS 247 (476)
Q Consensus 179 ~-~~~~~~~~i-~-----r~~l~~~L~~~~~~~gv~i~~~~v~~i~~~~~~~~~v~~~~g~--~i~a~~vV~A~G~~S 247 (476)
. .....+..+ . ...+...+.+.+++.|++++...++.+ +.+ .+.|...+|+ ++.+|.||+|+|+..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i--~~~-~~~v~~~~g~~~~~~~d~lviAtGs~p 160 (479)
T 2hqm_A 86 KEHLTFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVDVVFGWARFN--KDG-NVEVQKRDNTTEVYSANHILVATGGKA 160 (479)
T ss_dssp GGGCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEEC--TTS-CEEEEESSSCCEEEEEEEEEECCCEEE
T ss_pred cccCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEe--eCC-EEEEEeCCCcEEEEEeCEEEEcCCCCC
Confidence 0 000000000 0 123344555666778999994456654 233 4667667775 799999999999654
No 157
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.77 E-value=2.1e-09 Score=107.88 Aligned_cols=105 Identities=18% Similarity=0.124 Sum_probs=68.3
Q ss_pred ccEEEECCCHHHHHHHHHHHH---cCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccC
Q 011835 108 LDLVVIGCGPAGLALAAESAK---LGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRA 184 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~---~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (476)
.||+|||||++|+++|..|++ .|++|+|||+........+. . +...
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~~--------------~--------~~~~--------- 50 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPAL--------------P--------HVAI--------- 50 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCSS--------------C--------CCCS---------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccch--------------h--------hccc---------
Confidence 389999999999999999999 89999999987632111000 0 0000
Q ss_pred cceecHHHHHHHHHHHHHHCCCeEEEEEEEEEEEcCCceEEEEecCc----eEEECceEEEccCCCC
Q 011835 185 YGRVSRHLLHEELLRRCVESGVSYLSSKVESITESTSGHRLVACEHD----MIVPCRLATVASGAAS 247 (476)
Q Consensus 185 ~~~i~r~~l~~~L~~~~~~~gv~i~~~~v~~i~~~~~~~~~v~~~~g----~~i~a~~vV~A~G~~S 247 (476)
+......+...+.+.+.+.|++++..+|+.++.++. . |.+.++ .++.+|.||+|+|...
T Consensus 51 -~~~~~~~~~~~~~~~~~~~gv~~~~~~v~~i~~~~~-~--V~~~~g~~~~~~~~~d~lViAtG~~~ 113 (409)
T 3h8l_A 51 -GVRDVDELKVDLSEALPEKGIQFQEGTVEKIDAKSS-M--VYYTKPDGSMAEEEYDYVIVGIGAHL 113 (409)
T ss_dssp -SCCCCCCEEEEHHHHTGGGTCEEEECEEEEEETTTT-E--EEEECTTSCEEEEECSEEEECCCCEE
T ss_pred -CCcCHHHHHHHHHHHHhhCCeEEEEeeEEEEeCCCC-E--EEEccCCcccceeeCCEEEECCCCCc
Confidence 000011111123444556799999559999987665 3 444444 3589999999999754
No 158
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.76 E-value=2.8e-08 Score=101.11 Aligned_cols=97 Identities=19% Similarity=0.181 Sum_probs=79.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcce
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (476)
.+|+|||||++|+.+|..|++.|.+|+|+|+.......
T Consensus 168 ~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~~------------------------------------------ 205 (455)
T 2yqu_A 168 KRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILPT------------------------------------------ 205 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccccc------------------------------------------
Confidence 47999999999999999999999999999986532110
Q ss_pred ecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCCC
Q 011835 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASG 248 (476)
Q Consensus 188 i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S~ 248 (476)
. ...+.+.+.+.+++.||+++ +++|++++.+++ .+.+.+.+|+++.+|.||.|+|..+.
T Consensus 206 ~-~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~-~v~v~~~~g~~i~~D~vv~A~G~~p~ 265 (455)
T 2yqu_A 206 M-DLEVSRAAERVFKKQGLTIRTGVRVTAVVPEAK-GARVELEGGEVLEADRVLVAVGRRPY 265 (455)
T ss_dssp S-CHHHHHHHHHHHHHHTCEEECSCCEEEEEEETT-EEEEEETTSCEEEESEEEECSCEEEC
T ss_pred c-CHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCC-EEEEEECCCeEEEcCEEEECcCCCcC
Confidence 1 12355666777788899999 999999998766 56777778888999999999997764
No 159
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.76 E-value=2.4e-08 Score=102.28 Aligned_cols=131 Identities=15% Similarity=0.154 Sum_probs=70.8
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCc---cc-chHHHHhcCcchhhhhhcccc-eeeeCCCCCEE
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNY---GV-WEDEFRDLGLEGCIEHVWRDT-VVYIDEDEPIL 180 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~---G~-~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 180 (476)
..+||+||||||+|+++|+.|++.|++|+|||++. .+..| |. +...+-.. .......... ..-+....
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~~-~GG~~~~~gc~p~k~l~~~---~~~~~~~~~~~~~g~~~~~--- 91 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAELGARAAVVESHK-LGGTCVNVGCVPKKVMWNT---AVHSEFMHDHADYGFPSCE--- 91 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHHSHHHHHHHHHH---HHHHHHHTTTTTTTSCCCC---
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC-CCCcccccCccchHHHHHH---HHHHHHHHHHHhcCccCCC---
Confidence 46899999999999999999999999999999763 22111 10 00000000 0000000000 00000000
Q ss_pred eccCccee-c-----HHHHHHHHHHHHHHCCCeEEEEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCC
Q 011835 181 IGRAYGRV-S-----RHLLHEELLRRCVESGVSYLSSKVESITESTSGHRLVACEHDMIVPCRLATVASGAAS 247 (476)
Q Consensus 181 ~~~~~~~i-~-----r~~l~~~L~~~~~~~gv~i~~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S 247 (476)
...++..+ . ...+...+...+...||+++...+..++.. ...|. .++.++++|.||+|+|+..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~~~---~~~v~-~~g~~~~~d~lviAtG~~p 160 (478)
T 3dk9_A 92 GKFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTSDP---KPTIE-VSGKKYTAPHILIATGGMP 160 (478)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEECSCS---SCEEE-ETTEEEECSCEEECCCEEE
T ss_pred CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEeeCC---eEEEE-ECCEEEEeeEEEEccCCCC
Confidence 00001000 0 123444555666778999985555544332 23444 4667899999999999644
No 160
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.76 E-value=4.5e-08 Score=99.01 Aligned_cols=56 Identities=13% Similarity=0.158 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHHHCCCeEE-EEEEEEEEE-cCCceEEEEecCceEEECceEEEccCCC
Q 011835 191 HLLHEELLRRCVESGVSYL-SSKVESITE-STSGHRLVACEHDMIVPCRLATVASGAA 246 (476)
Q Consensus 191 ~~l~~~L~~~~~~~gv~i~-~~~v~~i~~-~~~~~~~v~~~~g~~i~a~~vV~A~G~~ 246 (476)
..|.+.|.+.+++.|++++ +++|++|.. +++++++|.+.+|++++||.||.|.|..
T Consensus 256 ~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 256 GGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp THHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCCcc
Confidence 4577888888999999999 999999998 5555788999999889999999999966
No 161
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=98.74 E-value=4.2e-07 Score=91.70 Aligned_cols=58 Identities=14% Similarity=0.176 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCCCC
Q 011835 191 HLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGK 249 (476)
Q Consensus 191 ~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S~~ 249 (476)
..+.+.|.+.+++.|++++ +++|++|..+++++..|. .+|++++||.||.|+|.++..
T Consensus 234 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~v~~v~-~~g~~~~ad~VV~a~~~~~~~ 292 (433)
T 1d5t_A 234 GELPQGFARLSAIYGGTYMLNKPVDDIIMENGKVVGVK-SEGEVARCKQLICDPSYVPDR 292 (433)
T ss_dssp THHHHHHHHHHHHHTCCCBCSCCCCEEEEETTEEEEEE-ETTEEEECSEEEECGGGCGGG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEeCCEEEEEE-ECCeEEECCEEEECCCCCccc
Confidence 3577788888888899999 999999998777445455 477889999999999988743
No 162
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.74 E-value=1.4e-08 Score=104.23 Aligned_cols=110 Identities=19% Similarity=0.234 Sum_probs=73.8
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCc
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAY 185 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (476)
..+||+||||||||+++|+.|++. ++|+|||+.......+- . . .. ...+.+
T Consensus 107 ~~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~---~---~-------------~~--------~~~g~~- 157 (493)
T 1y56_A 107 VVVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMW---L---K-------------GI--------KQEGFN- 157 (493)
T ss_dssp EEESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGG---G---T-------------CS--------EETTTT-
T ss_pred ccCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeee---c---c-------------cc--------ccCCCC-
Confidence 457999999999999999999999 99999999764432210 0 0 00 000101
Q ss_pred ceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCce--EEECceEEEccCCCC
Q 011835 186 GRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDM--IVPCRLATVASGAAS 247 (476)
Q Consensus 186 ~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~--~i~a~~vV~A~G~~S 247 (476)
. ....+...+.+.+ +.|++++ ++.|.++..+++........+++ ++.+|.||+|+|+..
T Consensus 158 -~-~~~~~~~~l~~~l-~~~v~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~d~lvlAtGa~~ 219 (493)
T 1y56_A 158 -K-DSRKVVEELVGKL-NENTKIYLETSALGVFDKGEYFLVPVVRGDKLIEILAKRVVLATGAID 219 (493)
T ss_dssp -E-EHHHHHHHHHHTC-CTTEEEETTEEECCCEECSSSEEEEEEETTEEEEEEESCEEECCCEEE
T ss_pred -C-CHHHHHHHHHHHH-hcCCEEEcCCEEEEEEcCCcEEEEEEecCCeEEEEECCEEEECCCCCc
Confidence 1 2334444444544 6799999 99999998876633333334453 689999999999765
No 163
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.73 E-value=2.5e-08 Score=101.45 Aligned_cols=129 Identities=18% Similarity=0.239 Sum_probs=70.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCc---cc-chHHH-HhcCcchhhhhhcccceeeeCCCCCEEec
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNY---GV-WEDEF-RDLGLEGCIEHVWRDTVVYIDEDEPILIG 182 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~---G~-~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (476)
+||+||||||||+++|..|++.|++|+|||+....+..| |. ....+ ....+...+.. ....+.... ...
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~--~~~g~~~~~---~~~- 75 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAKK--GLLGAKVKG---VEL- 75 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHH--CCTTEEECC---EEE-
T ss_pred CCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCCCCccceecchhHHHHHHHHHHHHHHhh--hcCCcccCC---Ccc-
Confidence 799999999999999999999999999999975443221 11 00000 00000000000 000000000 000
Q ss_pred cCcce-ec-H----HHHHHHHHHHHHHCCCeEEEEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCC
Q 011835 183 RAYGR-VS-R----HLLHEELLRRCVESGVSYLSSKVESITESTSGHRLVACEHDMIVPCRLATVASGAAS 247 (476)
Q Consensus 183 ~~~~~-i~-r----~~l~~~L~~~~~~~gv~i~~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S 247 (476)
++.. +. + ..+...+.+.+.+.|++++...+..+ +.+ .+.|.+ +|.++.+|.||+|+|+.+
T Consensus 76 -~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~i--~~~-~~~v~~-~g~~~~~d~lviAtG~~p 141 (455)
T 2yqu_A 76 -DLPALMAHKDKVVQANTQGVEFLFKKNGIARHQGTARFL--SER-KVLVEE-TGEELEARYILIATGSAP 141 (455)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEES--SSS-EEEETT-TCCEEEEEEEEECCCEEE
T ss_pred -CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEe--cCC-eEEEee-CCEEEEecEEEECCCCCC
Confidence 0100 01 1 12333445666778999983333332 223 455544 677899999999999754
No 164
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.72 E-value=6.7e-08 Score=98.09 Aligned_cols=98 Identities=16% Similarity=0.157 Sum_probs=79.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcce
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (476)
.+|+|||||+.|+.+|..|++.|.+|+|+|+.......
T Consensus 168 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------------------------------------------ 205 (450)
T 1ges_A 168 ERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLPS------------------------------------------ 205 (450)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhhh------------------------------------------
Confidence 48999999999999999999999999999986532111
Q ss_pred ecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCCC
Q 011835 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASG 248 (476)
Q Consensus 188 i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S~ 248 (476)
++. .+.+.+.+.+++.||+++ +++|++++.++++.+.|.+.+|+++.+|.||.|+|..+.
T Consensus 206 ~~~-~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~i~~D~vv~a~G~~p~ 266 (450)
T 1ges_A 206 FDP-MISETLVEVMNAEGPQLHTNAIPKAVVKNTDGSLTLELEDGRSETVDCLIWAIGREPA 266 (450)
T ss_dssp SCH-HHHHHHHHHHHHHSCEEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEES
T ss_pred hhH-HHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCcEEEEEECCCcEEEcCEEEECCCCCcC
Confidence 222 255666777788899999 999999988765457788888888999999999997664
No 165
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.72 E-value=7.7e-08 Score=96.20 Aligned_cols=99 Identities=22% Similarity=0.303 Sum_probs=81.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcce
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (476)
.+|+|||+|+.|+-+|..|++.|.+|+++++.......
T Consensus 143 ~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~------------------------------------------ 180 (404)
T 3fg2_P 143 KHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMAR------------------------------------------ 180 (404)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTT------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhh------------------------------------------
Confidence 47999999999999999999999999999986632111
Q ss_pred ecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCCC
Q 011835 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASG 248 (476)
Q Consensus 188 i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S~ 248 (476)
.....+.+.+.+.+++.||+++ +++|++++.++++...|.+.+|+++.+|.||.|+|..+.
T Consensus 181 ~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~V~~~dG~~i~aD~Vv~a~G~~p~ 242 (404)
T 3fg2_P 181 VVTPEISSYFHDRHSGAGIRMHYGVRATEIAAEGDRVTGVVLSDGNTLPCDLVVVGVGVIPN 242 (404)
T ss_dssp TSCHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSEEEECCCEEEC
T ss_pred ccCHHHHHHHHHHHHhCCcEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECcCCccC
Confidence 1123466677788888999999 999999998776566799999999999999999997653
No 166
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.71 E-value=8.3e-08 Score=96.32 Aligned_cols=99 Identities=24% Similarity=0.277 Sum_probs=82.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcce
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (476)
.+|+|||+|+.|+.+|..|++.|.+|+++++.......
T Consensus 153 ~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~------------------------------------------ 190 (415)
T 3lxd_A 153 KNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLAR------------------------------------------ 190 (415)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhh------------------------------------------
Confidence 47999999999999999999999999999986632111
Q ss_pred ecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCCC
Q 011835 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASG 248 (476)
Q Consensus 188 i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S~ 248 (476)
.....+.+.+.+.+++.||+++ +++|+.+..++++...|.+.+|+++.+|.||.|+|..+.
T Consensus 191 ~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~i~aD~Vv~a~G~~p~ 252 (415)
T 3lxd_A 191 VAGEALSEFYQAEHRAHGVDLRTGAAMDCIEGDGTKVTGVRMQDGSVIPADIVIVGIGIVPC 252 (415)
T ss_dssp TSCHHHHHHHHHHHHHTTCEEEETCCEEEEEESSSBEEEEEESSSCEEECSEEEECSCCEES
T ss_pred hcCHHHHHHHHHHHHhCCCEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECCCCccC
Confidence 1123466677788888999999 999999998766566899999999999999999997663
No 167
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.71 E-value=1.5e-08 Score=100.76 Aligned_cols=106 Identities=24% Similarity=0.188 Sum_probs=69.0
Q ss_pred cccEEEECCCHHHHHHHHHHHHcC--CcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccC
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLG--LNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRA 184 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G--~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (476)
.+||+|||||+||+++|..|++.| .+|+|+|++.... + ... .+...+ ..
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~g~~--~---~~~--------~l~~~~-------~~--------- 54 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADDGRS--Y---SKP--------MLSTGF-------SK--------- 54 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSCCCE--E---CGG--------GGGGTT-------TT---------
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCCCCc--c---Ccc--------cccHHH-------hC---------
Confidence 479999999999999999999999 5689999865211 1 000 000000 00
Q ss_pred cceecHHHHHH-HHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCC
Q 011835 185 YGRVSRHLLHE-ELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAAS 247 (476)
Q Consensus 185 ~~~i~r~~l~~-~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S 247 (476)
. .....+.. .+.+.+++.|++++ +++|+.++.++. .|.+.+ .++.+|.||+|+|+..
T Consensus 55 -~-~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~---~v~~~~-~~~~~d~lviAtG~~p 113 (384)
T 2v3a_A 55 -N-KDADGLAMAEPGAMAEQLNARILTHTRVTGIDPGHQ---RIWIGE-EEVRYRDLVLAWGAEP 113 (384)
T ss_dssp -T-CCHHHHEEECHHHHHHHTTCEEECSCCCCEEEGGGT---EEEETT-EEEECSEEEECCCEEE
T ss_pred -C-CCHHHhhccCHHHHHHhCCcEEEeCCEEEEEECCCC---EEEECC-cEEECCEEEEeCCCCc
Confidence 0 11122221 22344567899999 889999887544 344444 4699999999999755
No 168
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.71 E-value=2.4e-08 Score=104.48 Aligned_cols=109 Identities=15% Similarity=0.075 Sum_probs=70.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHc--CCcEEEECCCCCCC-CCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccC
Q 011835 108 LDLVVIGCGPAGLALAAESAKL--GLNVGLIGPDLPFT-NNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRA 184 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~--G~~V~liE~~~~~~-~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (476)
.||+||||||||+++|..|++. |++|+|||+..... ..+++. ..+. ....
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~~~~~l~-~~~~---------~~~~----------------- 54 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSFANCGLP-YHIS---------GEIA----------------- 54 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHH-HHHT---------SSSC-----------------
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCccccccCch-HHhc---------CCcC-----------------
Confidence 4899999999999999999998 89999999876432 111110 0000 0000
Q ss_pred cceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEe-cCc--eEEECceEEEccCCCC
Q 011835 185 YGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVAC-EHD--MIVPCRLATVASGAAS 247 (476)
Q Consensus 185 ~~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~-~~g--~~i~a~~vV~A~G~~S 247 (476)
.....+...+...+.+.|++++ +++|++++.+.+ .+.+.. .+| .++.+|.||+|+|+..
T Consensus 55 ---~~~~~~~~~~~~~~~~~~i~~~~~~~V~~id~~~~-~v~~~~~~~g~~~~~~~d~lviAtG~~p 117 (565)
T 3ntd_A 55 ---QRSALVLQTPESFKARFNVEVRVKHEVVAIDRAAK-LVTVRRLLDGSEYQESYDTLLLSPGAAP 117 (565)
T ss_dssp ---CGGGGBCCCHHHHHHHHCCEEETTEEEEEEETTTT-EEEEEETTTCCEEEEECSEEEECCCEEE
T ss_pred ---ChHHhhccCHHHHHHhcCcEEEECCEEEEEECCCC-EEEEEecCCCCeEEEECCEEEECCCCCC
Confidence 0000011111223345799999 999999988766 455443 234 4789999999999743
No 169
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.70 E-value=1.1e-08 Score=105.18 Aligned_cols=35 Identities=29% Similarity=0.303 Sum_probs=32.7
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
..+||+||||||||+++|+.|++.|++|+|||+..
T Consensus 7 ~~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~ 41 (492)
T 3ic9_A 7 INVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA 41 (492)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 35899999999999999999999999999999964
No 170
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.69 E-value=5.3e-08 Score=99.22 Aligned_cols=128 Identities=18% Similarity=0.208 Sum_probs=69.5
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCc---c-cchHHHHh-cCcchhhhhhcccceeeeCCCCCEEe
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNY---G-VWEDEFRD-LGLEGCIEHVWRDTVVYIDEDEPILI 181 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~---G-~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (476)
.+||+||||||+|+++|..|++.|++|+|||+.. .+..| | +....+.. ..+...+. ......+... . .
T Consensus 4 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~-~GG~~~~~gciP~k~l~~~a~~~~~~~-~~~~~g~~~~-~----~ 76 (463)
T 2r9z_A 4 HFDLIAIGGGSGGLAVAEKAAAFGKRVALIESKA-LGGTCVNVGCVPKKVMWYASHLAEAVR-DAPGFGVQAS-G----G 76 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHH-HGGGGTBCCC-------
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCCC-CCCcCcCcCchhHHHHHHHHHHHHHHh-hhhhcCcccC-C----C
Confidence 5899999999999999999999999999999973 22221 1 00000000 00000000 0000000000 0 0
Q ss_pred ccCcce-ecH-----HHHHHHHHHHHHHCCCeEEEEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCC
Q 011835 182 GRAYGR-VSR-----HLLHEELLRRCVESGVSYLSSKVESITESTSGHRLVACEHDMIVPCRLATVASGAAS 247 (476)
Q Consensus 182 ~~~~~~-i~r-----~~l~~~L~~~~~~~gv~i~~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S 247 (476)
...+.. +.+ ..+...+.+.+.+.|++++..+++.++ .. . |.+ +|.++.+|.||+|+|+..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~--~~-~--v~~-~g~~~~~d~lviAtGs~p 142 (463)
T 2r9z_A 77 TLDWPRLVAGRDRYIGAINSFWDGYVERLGITRVDGHARFVD--AH-T--IEV-EGQRLSADHIVIATGGRP 142 (463)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEE--TT-E--EEE-TTEEEEEEEEEECCCEEE
T ss_pred CcCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEeEEEEcc--CC-E--EEE-CCEEEEcCEEEECCCCCC
Confidence 000100 111 223344455567789999944555543 22 2 333 677899999999999654
No 171
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.69 E-value=2.2e-08 Score=103.09 Aligned_cols=138 Identities=16% Similarity=0.158 Sum_probs=80.4
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHcCC--------------cEEEECCCCCCCCCcccc-------hHHHHhcCc--chh
Q 011835 105 NGILDLVVIGCGPAGLALAAESAKLGL--------------NVGLIGPDLPFTNNYGVW-------EDEFRDLGL--EGC 161 (476)
Q Consensus 105 ~~~~dVvIIGgG~aGl~~A~~La~~G~--------------~V~liE~~~~~~~~~G~~-------~~~l~~~~~--~~~ 161 (476)
+..+||||||+||+||++|+.|.+.|. .+..+|+.+.+.=+-|.. ...++++.- .+.
T Consensus 37 ~~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~Wh~g~~~p~~~~q~~fl~Dlvtl~~P~ 116 (501)
T 4b63_A 37 DELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFAWHSGMLVPGSKMQISFIKDLATLRDPR 116 (501)
T ss_dssp TSCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCCSSGGGCCTTCBCSSCGGGSSSTTTCTT
T ss_pred CCcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCCcCCCCCCCCccccccchhhhccccCCC
Confidence 456899999999999999999998654 445566655433111110 000011000 000
Q ss_pred hhhhcccceeeeCC-CCCEE-eccCcceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCC-------ceEEEEecCc
Q 011835 162 IEHVWRDTVVYIDE-DEPIL-IGRAYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTS-------GHRLVACEHD 231 (476)
Q Consensus 162 ~~~~~~~~~~~~~~-~~~~~-~~~~~~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~-------~~~~v~~~~g 231 (476)
-...+.. +... +.... .........|.++.+.|...+++.+..+. +++|+++...++ +.+.|++.++
T Consensus 117 s~~sf~~---yl~~~~rl~~f~~~~~~~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~ 193 (501)
T 4b63_A 117 SSFTFLN---YLHQKGRLIHFTNLSTFLPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNV 193 (501)
T ss_dssp CTTSHHH---HHHHHTCHHHHHTTCCSCCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEET
T ss_pred CccchHH---HHHHhCCccCCccccCCCCCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecC
Confidence 0000000 0000 00000 00011236899999999999988887788 999999987543 1467776553
Q ss_pred -----eEEECceEEEccCC
Q 011835 232 -----MIVPCRLATVASGA 245 (476)
Q Consensus 232 -----~~i~a~~vV~A~G~ 245 (476)
.++.|+.||+|+|.
T Consensus 194 ~~g~~~~~~ar~vVlatG~ 212 (501)
T 4b63_A 194 ETGEISARRTRKVVIAIGG 212 (501)
T ss_dssp TTCCEEEEEEEEEEECCCC
T ss_pred CCceEEEEEeCEEEECcCC
Confidence 46899999999994
No 172
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.69 E-value=5.7e-08 Score=100.01 Aligned_cols=134 Identities=18% Similarity=0.173 Sum_probs=73.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHc---CCcEEEECCCCCCCCC---ccc-chHHHHh-cCcchhhhhhcccceee-eCCCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKL---GLNVGLIGPDLPFTNN---YGV-WEDEFRD-LGLEGCIEHVWRDTVVY-IDEDEP 178 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~---G~~V~liE~~~~~~~~---~G~-~~~~l~~-~~~~~~~~~~~~~~~~~-~~~~~~ 178 (476)
+||+|||||++|+++|+.|++. |++|+|||+.. .+.. +|. ....+-. ..+...+. ......+. +...
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG~~~~~g~~psk~l~~~a~~~~~~~-~~~~~g~~~~~~~-- 78 (499)
T 1xdi_A 3 TRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG-IGGAAVLDDCVPSKTFIASTGLRTELR-RAPHLGFHIDFDD-- 78 (499)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHT-TTTTTTBC-------
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-cCCcccCcCccchHHHHHHHHHHHHHH-HHHhCCCccccCC--
Confidence 7999999999999999999999 99999999976 3221 111 1000000 00000000 00000000 0000
Q ss_pred EEeccCccee-cH-----HHHHHHHHHHHHHCCCeEEEEEEEEEEEc---CCceEEEEecCce--EEECceEEEccCCCC
Q 011835 179 ILIGRAYGRV-SR-----HLLHEELLRRCVESGVSYLSSKVESITES---TSGHRLVACEHDM--IVPCRLATVASGAAS 247 (476)
Q Consensus 179 ~~~~~~~~~i-~r-----~~l~~~L~~~~~~~gv~i~~~~v~~i~~~---~~~~~~v~~~~g~--~i~a~~vV~A~G~~S 247 (476)
....+..+ .+ ..+...+.+.+++.|++++...++.++.. +++.+.|...+|+ ++.+|.||+|+|+..
T Consensus 79 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~~~~~~~~~V~~~~g~~~~~~~d~lviATGs~p 156 (499)
T 1xdi_A 79 --AKISLPQIHARVKTLAAAQSADITAQLLSMGVQVIAGRGELIDSTPGLARHRIKATAADGSTSEHEADVVLVATGASP 156 (499)
T ss_dssp ---CBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEECCSSSCCSSEEEEEECTTSCEEEEEESEEEECCCEEE
T ss_pred --CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCcccCCCCEEEEEeCCCcEEEEEeCEEEEcCCCCC
Confidence 00001101 11 12444456667788999993346665542 1125667766775 799999999999654
No 173
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.69 E-value=7.3e-08 Score=98.05 Aligned_cols=34 Identities=29% Similarity=0.490 Sum_probs=31.9
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEECCC
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPD 139 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~ 139 (476)
..+||+||||||||+++|..|++.|++|+|||++
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 37 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQ 37 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCCEEEECSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEccC
Confidence 4589999999999999999999999999999993
No 174
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.68 E-value=1.3e-07 Score=96.48 Aligned_cols=97 Identities=24% Similarity=0.177 Sum_probs=77.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcce
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (476)
.+|+|||||++|+.+|..|++.|.+|+|+|+.......
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------------------------------------------ 207 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQ------------------------------------------ 207 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccccc------------------------------------------
Confidence 48999999999999999999999999999986632111
Q ss_pred ecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEec-C--ce--EEECceEEEccCCCCC
Q 011835 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACE-H--DM--IVPCRLATVASGAASG 248 (476)
Q Consensus 188 i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~-~--g~--~i~a~~vV~A~G~~S~ 248 (476)
.+ ..+.+.+.+.+++.||+++ +++|++++.+++ .+.|.+. + |+ ++.+|.||.|+|..+.
T Consensus 208 ~~-~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~-~~~v~~~~~~~g~~~~i~~D~vv~a~G~~p~ 272 (464)
T 2eq6_A 208 GD-PETAALLRRALEKEGIRVRTKTKAVGYEKKKD-GLHVRLEPAEGGEGEEVVVDKVLVAVGRKPR 272 (464)
T ss_dssp SC-HHHHHHHHHHHHHTTCEEECSEEEEEEEEETT-EEEEEEEETTCCSCEEEEESEEEECSCEEES
T ss_pred cC-HHHHHHHHHHHHhcCCEEEcCCEEEEEEEeCC-EEEEEEeecCCCceeEEEcCEEEECCCcccC
Confidence 11 2355666777888999999 999999988766 4566665 5 65 8999999999997663
No 175
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.68 E-value=6.6e-08 Score=98.16 Aligned_cols=130 Identities=13% Similarity=0.131 Sum_probs=69.9
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcc----cchHHHHhc-CcchhhhhhcccceeeeCCCCCEE
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYG----VWEDEFRDL-GLEGCIEHVWRDTVVYIDEDEPIL 180 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G----~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 180 (476)
..+||+||||||+|+++|..|++.|++|+|||+.. .+..|. +....+... .+...+........+... .
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~-~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~~g~~~~-----~ 76 (450)
T 1ges_A 3 KHYDYIAIGGGSGGIASINRAAMYGQKCALIEAKE-LGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDTT-----I 76 (450)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHTTGGGGTEEEE-----E
T ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCCC-CCCcccccCccChHHHHHHHHHHHHHHHHHHhcCccCC-----C
Confidence 35899999999999999999999999999999973 222211 000000000 000000000000000000 0
Q ss_pred eccCccee-c-----HHHHHHHHHHHHHHCCCeEEEEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCC
Q 011835 181 IGRAYGRV-S-----RHLLHEELLRRCVESGVSYLSSKVESITESTSGHRLVACEHDMIVPCRLATVASGAAS 247 (476)
Q Consensus 181 ~~~~~~~i-~-----r~~l~~~L~~~~~~~gv~i~~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S 247 (476)
....+..+ . ...+...+...+.+.|++++..+++.++. . . |.+ +|+++.+|.||+|+|+..
T Consensus 77 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~~--~-~--v~~-~g~~~~~d~lviAtGs~p 143 (450)
T 1ges_A 77 NKFNWETLIASRTAYIDRIHTSYENVLGKNNVDVIKGFARFVDA--K-T--LEV-NGETITADHILIATGGRP 143 (450)
T ss_dssp EEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCCEEEET--T-E--EEE-TTEEEEEEEEEECCCEEE
T ss_pred CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecC--C-E--EEE-CCEEEEeCEEEECCCCCC
Confidence 00000001 0 12233444555677899999445555542 2 2 333 677899999999999644
No 176
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.66 E-value=6.7e-08 Score=99.18 Aligned_cols=32 Identities=38% Similarity=0.488 Sum_probs=30.5
Q ss_pred cccEEEECCCHHHHHHHHHHHH-cCCcEEEECC
Q 011835 107 ILDLVVIGCGPAGLALAAESAK-LGLNVGLIGP 138 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~-~G~~V~liE~ 138 (476)
.+||+||||||+|+++|+.|++ .|++|+|||+
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 35 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDL 35 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred cccEEEECCCHHHHHHHHHHHHHcCCEEEEEec
Confidence 4899999999999999999999 9999999993
No 177
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=98.66 E-value=5e-08 Score=107.99 Aligned_cols=110 Identities=24% Similarity=0.267 Sum_probs=72.0
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCc
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAY 185 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (476)
..+||+||||||||+++|..|++.|++|+|||+.......+ .. + . ....+
T Consensus 127 ~~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~---~~-----~-~----------k~~i~----------- 176 (965)
T 2gag_A 127 VHTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTL---LD-----T-A----------GEQID----------- 176 (965)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGG---GG-----S-S----------CCEET-----------
T ss_pred cCCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCcee---cc-----C-C----------ccccC-----------
Confidence 35899999999999999999999999999999976433221 00 0 0 00000
Q ss_pred ceecHHHHHHHHHHHHHHC-CCeEE-EEEEEEEEEcCCceEEEE---------e------cCceEEECceEEEccCCCC
Q 011835 186 GRVSRHLLHEELLRRCVES-GVSYL-SSKVESITESTSGHRLVA---------C------EHDMIVPCRLATVASGAAS 247 (476)
Q Consensus 186 ~~i~r~~l~~~L~~~~~~~-gv~i~-~~~v~~i~~~~~~~~~v~---------~------~~g~~i~a~~vV~A~G~~S 247 (476)
+ .....+...+.+.+.+. +++++ +++|..+...+. ...+. . .++.++.+|.||+|||+..
T Consensus 177 ~-~~~~~~~~~~~~~l~~~~~v~~~~~~~V~~i~~~~~-~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~p 253 (965)
T 2gag_A 177 G-MDSSAWIEQVTSELAEAEETTHLQRTTVFGSYDANY-LIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAHE 253 (965)
T ss_dssp T-EEHHHHHHHHHHHHHHSTTEEEESSEEEEEEETTTE-EEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEEE
T ss_pred C-CCHHHHHHHHHHHHhhcCCcEEEeCCEEEeeecCCc-eeeeEeecccccccccccCCCCceEEEECCEEEECCCCcc
Confidence 0 12334445556666664 99999 999988864332 22211 1 1124689999999999764
No 178
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.65 E-value=1.4e-07 Score=95.12 Aligned_cols=98 Identities=23% Similarity=0.269 Sum_probs=78.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcce
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (476)
..|+|||||+.|+-+|..|++.|.+|+|+|+....... .
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~-----------------------------------------~ 188 (431)
T 1q1r_A 150 NRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLER-----------------------------------------V 188 (431)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTT-----------------------------------------T
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccc-----------------------------------------h
Confidence 47999999999999999999999999999986532111 0
Q ss_pred ecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEE--cCCceEEEEecCceEEECceEEEccCCCC
Q 011835 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITE--STSGHRLVACEHDMIVPCRLATVASGAAS 247 (476)
Q Consensus 188 i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~--~~~~~~~v~~~~g~~i~a~~vV~A~G~~S 247 (476)
++ ..+.+.+.+.+++.||+++ +++|++++. ++++...|.+.+|+++.+|.||.|+|..+
T Consensus 189 ~~-~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~~p 250 (431)
T 1q1r_A 189 TA-PPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGLIP 250 (431)
T ss_dssp SC-HHHHHHHHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEEEECCCEEE
T ss_pred hh-HHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEEEECCCCCc
Confidence 11 2355566777788899999 999999987 44445578888998999999999999765
No 179
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.65 E-value=2e-07 Score=95.00 Aligned_cols=97 Identities=16% Similarity=0.212 Sum_probs=79.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcce
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (476)
-.|+|||||+.|+.+|..|++.|.+|+|+|+.......
T Consensus 167 ~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~~------------------------------------------ 204 (463)
T 2r9z_A 167 KRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLFQ------------------------------------------ 204 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccccc------------------------------------------
Confidence 47999999999999999999999999999986532211
Q ss_pred ecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCce-EEECceEEEccCCCCC
Q 011835 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDM-IVPCRLATVASGAASG 248 (476)
Q Consensus 188 i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~-~i~a~~vV~A~G~~S~ 248 (476)
++. .+.+.+.+.+++.||+++ +++|++++.+++ .+.|.+.+|+ ++.+|.||.|+|..+.
T Consensus 205 ~~~-~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~-~~~v~~~~G~~~i~~D~vv~a~G~~p~ 265 (463)
T 2r9z_A 205 FDP-LLSATLAENMHAQGIETHLEFAVAALERDAQ-GTTLVAQDGTRLEGFDSVIWAVGRAPN 265 (463)
T ss_dssp SCH-HHHHHHHHHHHHTTCEEESSCCEEEEEEETT-EEEEEETTCCEEEEESEEEECSCEEES
T ss_pred cCH-HHHHHHHHHHHHCCCEEEeCCEEEEEEEeCC-eEEEEEeCCcEEEEcCEEEECCCCCcC
Confidence 122 244556777888999999 999999988766 4778888888 8999999999997663
No 180
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=98.65 E-value=3.9e-08 Score=95.61 Aligned_cols=112 Identities=20% Similarity=0.209 Sum_probs=71.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCC------C---------Cc---------ccchHHHHhcCcchhhh
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFT------N---------NY---------GVWEDEFRDLGLEGCIE 163 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~------~---------~~---------G~~~~~l~~~~~~~~~~ 163 (476)
+||+|||||+||+.+|+.|++.|++|+|+|+.+... . .. |...++++.++- .+.
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~~tp~h~~d~i~eL~CnpSigG~~~~~akGlL~~EIdaLGg--~m~ 79 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKRMTPAHGTDRFAEIVCSNSLGGEGETNAKGLLQAEMRRAGS--LVM 79 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTSCCSSCCSSCTTCCCSCCEEEECSTTCHHHHHHHHHHHHTC--HHH
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCcCCccccCCCccccccCcCCCccccccchhHHHHHHHHcCC--hHh
Confidence 599999999999999999999999999999865211 0 11 111223333221 111
Q ss_pred hhcccceeeeCCCCCEEeccCcceecHHHHHHHHHHHHHH-CCCeEEEEEEEEEEEcCCceEEEEecCceEEECceEEEc
Q 011835 164 HVWRDTVVYIDEDEPILIGRAYGRVSRHLLHEELLRRCVE-SGVSYLSSKVESITESTSGHRLVACEHDMIVPCRLATVA 242 (476)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~-~gv~i~~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A 242 (476)
...+...+ +.+.. -.++|..+...+.+.++. .++++++.+|+++. ++.||+|
T Consensus 80 ~~aD~~~i--pAg~a-------l~vDR~~f~~~~~~~le~~pni~l~q~eV~~l~------------------~~~vIia 132 (443)
T 3g5s_A 80 EAADLARV--PAGGA-------LAVDREEFSGYITERLTGHPLLEVVREEVREIP------------------PGITVLA 132 (443)
T ss_dssp HHHHHSEE--CCTTE-------EEECHHHHHHHHHHHHHTCTTEEEECSCCCSCC------------------SSSEEEC
T ss_pred hhhhhcCC--CCCcc-------ccCCcHHHHHHHHHHHHcCCCeEEEhhhhhhhc------------------CCCEEEe
Confidence 11111111 11111 149999999999999966 47888766665442 4688888
Q ss_pred cCCCCC
Q 011835 243 SGAASG 248 (476)
Q Consensus 243 ~G~~S~ 248 (476)
||..+.
T Consensus 133 tG~~~s 138 (443)
T 3g5s_A 133 TGPLTS 138 (443)
T ss_dssp CCTTCC
T ss_pred CCCCcc
Confidence 886553
No 181
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.64 E-value=5.7e-08 Score=99.01 Aligned_cols=34 Identities=41% Similarity=0.629 Sum_probs=32.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
.+||+||||||||+++|..|++.|++|+|||+..
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~ 39 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE 39 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 5899999999999999999999999999999976
No 182
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.64 E-value=2.9e-08 Score=102.17 Aligned_cols=34 Identities=35% Similarity=0.583 Sum_probs=32.1
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
++||+||||||||+++|..|++.|++|+|||+..
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 35 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKSR 35 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 3799999999999999999999999999999974
No 183
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.63 E-value=5.3e-08 Score=100.78 Aligned_cols=127 Identities=14% Similarity=0.048 Sum_probs=72.5
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcc---c-chHHHHhcCcchhhhhhcccceeeeCCCCCEEe
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYG---V-WEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILI 181 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G---~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (476)
..+||+|||||++|+++|+.|++.|++|+|||+....+..|. . ....+... .... ....... .+. . +
T Consensus 42 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~p~k~l~~~--~~~~-~~~~~~~-~~g---~--~ 112 (523)
T 1mo9_A 42 REYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGGSCPHNACVPHHLFSDC--AAEL-MLARTFS-GQY---W--F 112 (523)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSCHHHHHSHHHHHHHHHH--HHHH-HHHHHTT-TST---T--C
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCcccccCcCchHHHHHH--HHHH-HHHhhhh-hcC---c--H
Confidence 458999999999999999999999999999999764332221 0 00000000 0000 0000000 000 0 0
Q ss_pred ccCcc-eecHHHHHHHHH-------HHH-----HHCCCeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCC
Q 011835 182 GRAYG-RVSRHLLHEELL-------RRC-----VESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAAS 247 (476)
Q Consensus 182 ~~~~~-~i~r~~l~~~L~-------~~~-----~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S 247 (476)
..-.. .++...+...+. +.+ .+.|++++ +++++.++. . .|.+. +.++.+|.||+|+|+..
T Consensus 113 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~--~---~v~~~-g~~~~~d~lViATGs~p 186 (523)
T 1mo9_A 113 PDMTEKVVGIKEVVDLFRAGRNGPHGIMNFQSKEQLNLEYILNCPAKVIDN--H---TVEAA-GKVFKAKNLILAVGAGP 186 (523)
T ss_dssp CCCTTCCCCHHHHHHHHHHHTHHHHHHHHHHHHHTSCCCEEESSCCEEEET--T---EEEET-TEEEEBSCEEECCCEEC
T ss_pred HHHHhhhhhHHHHHHHHHhhhhhhhhhhhhcccccCCcEEEEeeEEEEeeC--C---EEEEC-CEEEEeCEEEECCCCCC
Confidence 00000 012333433332 344 67899999 888887763 2 23344 67899999999999754
No 184
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.63 E-value=1.2e-08 Score=104.93 Aligned_cols=131 Identities=16% Similarity=0.122 Sum_probs=72.6
Q ss_pred CcccEEEECCCHHHHHHHHHHHHc--CCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCE--Ee
Q 011835 106 GILDLVVIGCGPAGLALAAESAKL--GLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPI--LI 181 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~--G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 181 (476)
..+||+|||||+||+++|..|++. |.+|+|||+.....-........+-. +....... ...+..-..... .+
T Consensus 10 ~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~y~r~~lsk~l~~-~~~~~~~~---~~~~~~~~~~~~~~~~ 85 (493)
T 1m6i_A 10 SHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKELWF-SDDPNVTK---TLRFKQWNGKERSIYF 85 (493)
T ss_dssp SEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCCBCSGGGGTGGGC-C--CTHHH---HCEEECTTSCEEESBS
T ss_pred CcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCCCCCHHhhc-CCccchhh---cccccccccccccccc
Confidence 458999999999999999999887 89999999875432111000000000 00000000 000000000000 00
Q ss_pred ccCcceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCCC
Q 011835 182 GRAYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASG 248 (476)
Q Consensus 182 ~~~~~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S~ 248 (476)
...........+ ..+.+.|++++ +++|+.++.+.. .|.+.+|+++.+|.||+|||+...
T Consensus 86 ~~~~~~~~~~~l-----~~~~~~gv~~~~g~~v~~id~~~~---~V~~~~g~~i~yd~lviATGs~p~ 145 (493)
T 1m6i_A 86 QPPSFYVSAQDL-----PHIENGGVAVLTGKKVVQLDVRDN---MVKLNDGSQITYEKCLIATGGTPR 145 (493)
T ss_dssp SCGGGSBCTTTT-----TTSTTCEEEEEETCCEEEEEGGGT---EEEETTSCEEEEEEEEECCCEEEC
T ss_pred cchHhhcchhhh-----hhhhcCCeEEEcCCEEEEEECCCC---EEEECCCCEEECCEEEECCCCCCC
Confidence 000001111111 11235689999 889999987654 566788888999999999997553
No 185
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.62 E-value=2.5e-07 Score=93.98 Aligned_cols=97 Identities=20% Similarity=0.267 Sum_probs=76.5
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcce
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (476)
.+|+|||||+.|+.+|..|++.|.+|+|+|+.......
T Consensus 171 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------------------------------------------ 208 (455)
T 1ebd_A 171 KSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILSG------------------------------------------ 208 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccc------------------------------------------
Confidence 58999999999999999999999999999986532111
Q ss_pred ecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEec---CceEEECceEEEccCCCCC
Q 011835 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACE---HDMIVPCRLATVASGAASG 248 (476)
Q Consensus 188 i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~---~g~~i~a~~vV~A~G~~S~ 248 (476)
.+ ..+.+.+.+.+++.||+++ +++|++++.+++ .+.+.+. +++++.+|.||.|+|..+.
T Consensus 209 ~~-~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~-~~~v~~~~~g~~~~~~~D~vv~a~G~~p~ 271 (455)
T 1ebd_A 209 FE-KQMAAIIKKRLKKKGVEVVTNALAKGAEERED-GVTVTYEANGETKTIDADYVLVTVGRRPN 271 (455)
T ss_dssp SC-HHHHHHHHHHHHHTTCEEEESEEEEEEEEETT-EEEEEEEETTEEEEEEESEEEECSCEEES
T ss_pred cC-HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCC-eEEEEEEeCCceeEEEcCEEEECcCCCcc
Confidence 12 2355566777888999999 999999987765 4555554 4568999999999997653
No 186
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.62 E-value=4.8e-08 Score=98.72 Aligned_cols=108 Identities=15% Similarity=0.129 Sum_probs=67.5
Q ss_pred cEEEECCCHHHHHHHHHHHHcC--CcEEEECCCCCCC-CCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCc
Q 011835 109 DLVVIGCGPAGLALAAESAKLG--LNVGLIGPDLPFT-NNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAY 185 (476)
Q Consensus 109 dVvIIGgG~aGl~~A~~La~~G--~~V~liE~~~~~~-~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (476)
+||||||||||+++|..|++.| .+|+|||++.... ..+++. ..+. ...... ...
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~-~~~~---------~~~~~~------------~~~- 58 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCALP-YVIG---------EVVEDR------------RYA- 58 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSBCGGGHH-HHHT---------TSSCCG------------GGT-
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCcchhH-HHHc---------CCccch------------hhh-
Confidence 6999999999999999999998 5699999865322 111110 0000 000000 000
Q ss_pred ceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEec---CceEEECceEEEccCCCC
Q 011835 186 GRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACE---HDMIVPCRLATVASGAAS 247 (476)
Q Consensus 186 ~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~---~g~~i~a~~vV~A~G~~S 247 (476)
-.... .+..++.|++++ +++|+.++.+.. .+.+... ++.++.+|.||+|+|+..
T Consensus 59 ~~~~~-------~~~~~~~~i~~~~~~~V~~id~~~~-~~~~~~~~~~~~~~~~yd~lVIATGs~p 116 (437)
T 4eqs_A 59 LAYTP-------EKFYDRKQITVKTYHEVIAINDERQ-TVSVLNRKTNEQFEESYDKLILSPGASA 116 (437)
T ss_dssp BCCCH-------HHHHHHHCCEEEETEEEEEEETTTT-EEEEEETTTTEEEEEECSEEEECCCEEE
T ss_pred hhcCH-------HHHHHhcCCEEEeCCeEEEEEccCc-EEEEEeccCCceEEEEcCEEEECCCCcc
Confidence 00112 123455799998 999999988766 4444332 235789999999999754
No 187
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.62 E-value=2.2e-07 Score=95.55 Aligned_cols=98 Identities=10% Similarity=0.131 Sum_probs=79.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcce
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (476)
-.|+|||||+.|+-+|..|++.|.+|+|+|+.+.....
T Consensus 177 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~------------------------------------------ 214 (500)
T 1onf_A 177 KKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILRK------------------------------------------ 214 (500)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCTT------------------------------------------
T ss_pred CeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCcc------------------------------------------
Confidence 48999999999999999999999999999986632211
Q ss_pred ecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCceE-EECceEEEccCCCCC
Q 011835 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMI-VPCRLATVASGAASG 248 (476)
Q Consensus 188 i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~-i~a~~vV~A~G~~S~ 248 (476)
++. .+.+.+.+.+++.||+++ +++|++++.++++.+.|.+.+|++ +.+|.||.|+|..+.
T Consensus 215 ~d~-~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~D~vi~a~G~~p~ 276 (500)
T 1onf_A 215 FDE-SVINVLENDMKKNNINIVTFADVVEIKKVSDKNLSIHLSDGRIYEHFDHVIYCVGRSPD 276 (500)
T ss_dssp SCH-HHHHHHHHHHHHTTCEEECSCCEEEEEESSTTCEEEEETTSCEEEEESEEEECCCBCCT
T ss_pred cch-hhHHHHHHHHHhCCCEEEECCEEEEEEEcCCceEEEEECCCcEEEECCEEEECCCCCcC
Confidence 222 355566777888999999 999999988655457788888887 999999999997764
No 188
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.61 E-value=1.3e-07 Score=95.80 Aligned_cols=98 Identities=20% Similarity=0.190 Sum_probs=76.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcc
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYG 186 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (476)
..+|+|||||++|+.+|..|++.|.+|+|+|+.......
T Consensus 149 ~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~----------------------------------------- 187 (447)
T 1nhp_A 149 VNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGV----------------------------------------- 187 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT-----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcccccc-----------------------------------------
Confidence 368999999999999999999999999999986632211
Q ss_pred eecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCCC
Q 011835 187 RVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASG 248 (476)
Q Consensus 187 ~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S~ 248 (476)
..+ ..+.+.+.+.+++.||+++ +++|++++.+ ++...+.+ ++.++.+|.||+|+|..+.
T Consensus 188 ~~~-~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~-~~v~~v~~-~~~~i~~d~vi~a~G~~p~ 247 (447)
T 1nhp_A 188 YLD-KEFTDVLTEEMEANNITIATGETVERYEGD-GRVQKVVT-DKNAYDADLVVVAVGVRPN 247 (447)
T ss_dssp TCC-HHHHHHHHHHHHTTTEEEEESCCEEEEECS-SBCCEEEE-SSCEEECSEEEECSCEEES
T ss_pred cCC-HHHHHHHHHHHHhCCCEEEcCCEEEEEEcc-CcEEEEEE-CCCEEECCEEEECcCCCCC
Confidence 011 3356677788888999999 8999999875 32434555 4567999999999997663
No 189
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.61 E-value=1.9e-07 Score=98.24 Aligned_cols=34 Identities=38% Similarity=0.502 Sum_probs=31.9
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEECCC
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPD 139 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~ 139 (476)
..+||+||||||||+++|..|++.|++|+|||+.
T Consensus 106 ~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~ 139 (598)
T 2x8g_A 106 YDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYV 139 (598)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred ccccEEEECCCccHHHHHHHHHhCCCeEEEEecc
Confidence 4589999999999999999999999999999974
No 190
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.61 E-value=9.9e-08 Score=95.63 Aligned_cols=98 Identities=19% Similarity=0.204 Sum_probs=79.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcce
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (476)
.+|+|||+|+.|+.+|..|++.|.+|+++++....... .
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~-----------------------------------------~ 182 (410)
T 3ef6_A 144 TRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLVR-----------------------------------------V 182 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSHH-----------------------------------------H
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccchh-----------------------------------------h
Confidence 47999999999999999999999999999986632100 0
Q ss_pred ecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCCC
Q 011835 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASG 248 (476)
Q Consensus 188 i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S~ 248 (476)
+ ...+.+.+.+.+++.||+++ +++|++++.++. ...|.+.+|+++.+|.||.|+|..+.
T Consensus 183 ~-~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~-~~~v~~~dg~~i~aD~Vv~a~G~~p~ 242 (410)
T 3ef6_A 183 L-GRRIGAWLRGLLTELGVQVELGTGVVGFSGEGQ-LEQVMASDGRSFVADSALICVGAEPA 242 (410)
T ss_dssp H-CHHHHHHHHHHHHHHTCEEECSCCEEEEECSSS-CCEEEETTSCEEECSEEEECSCEEEC
T ss_pred c-CHHHHHHHHHHHHHCCCEEEeCCEEEEEeccCc-EEEEEECCCCEEEcCEEEEeeCCeec
Confidence 1 13456677777888999999 999999987653 66888999999999999999997653
No 191
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.60 E-value=2.6e-07 Score=94.55 Aligned_cols=98 Identities=17% Similarity=0.205 Sum_probs=78.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcce
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (476)
-.|+|||||+.|+-+|..|++.|.+|+|+|+.+.....
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~------------------------------------------ 223 (479)
T 2hqm_A 186 KKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLRK------------------------------------------ 223 (479)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCTT------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCccccc------------------------------------------
Confidence 47999999999999999999999999999986632211
Q ss_pred ecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCc-eEEEEecCc-eEEECceEEEccCCCCC
Q 011835 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSG-HRLVACEHD-MIVPCRLATVASGAASG 248 (476)
Q Consensus 188 i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~-~~~v~~~~g-~~i~a~~vV~A~G~~S~ 248 (476)
++ ..+.+.+.+.+++.||+++ +++|++++.++++ .+.|.+.+| +++.+|.||.|+|..+.
T Consensus 224 ~d-~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~ 286 (479)
T 2hqm_A 224 FD-ECIQNTITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRKSH 286 (479)
T ss_dssp SC-HHHHHHHHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCEEEC
T ss_pred cC-HHHHHHHHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCCCc
Confidence 22 2355566777788899999 9999999876553 467888888 88999999999997654
No 192
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.60 E-value=2.6e-08 Score=102.40 Aligned_cols=109 Identities=16% Similarity=0.242 Sum_probs=69.2
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCc
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAY 185 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (476)
++.+|||||||+||+++|..|++.+++|+|||+...+ ++...|.+. . .
T Consensus 41 ~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~~-----~~~PlL~~v---------a--------~---------- 88 (502)
T 4g6h_A 41 DKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSYF-----LFTPLLPSA---------P--------V---------- 88 (502)
T ss_dssp SSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSEE-----ECGGGGGGT---------T--------T----------
T ss_pred CCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCCc-----ccccchhHH---------h--------h----------
Confidence 3468999999999999999999999999999986521 111111100 0 0
Q ss_pred ceecHHHHHHHHHHHH--HHCCCeEEEEEEEEEEEcCCceEEEEe------------------cCceEEECceEEEccCC
Q 011835 186 GRVSRHLLHEELLRRC--VESGVSYLSSKVESITESTSGHRLVAC------------------EHDMIVPCRLATVASGA 245 (476)
Q Consensus 186 ~~i~r~~l~~~L~~~~--~~~gv~i~~~~v~~i~~~~~~~~~v~~------------------~~g~~i~a~~vV~A~G~ 245 (476)
|.++...+..-+.+.+ .+.+++++..+|++|+.+.. .+.+.. .++.++.+|.+|+|+|+
T Consensus 89 G~l~~~~i~~p~~~~~~~~~~~v~~~~~~v~~ID~~~k-~V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs 167 (502)
T 4g6h_A 89 GTVDEKSIIEPIVNFALKKKGNVTYYEAEATSINPDRN-TVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGA 167 (502)
T ss_dssp TSSCGGGGEEEHHHHHTTCSSCEEEEEEEEEEEEGGGT-EEEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCC
T ss_pred ccccHHHhhhhHHHHHHhhcCCeEEEEEEEEEEEhhhC-EEEEeecccceeecccccccccccCCceEEeCCEEEEcCCc
Confidence 0011100000011211 34578888889999988766 444332 24578999999999997
Q ss_pred CC
Q 011835 246 AS 247 (476)
Q Consensus 246 ~S 247 (476)
.+
T Consensus 168 ~~ 169 (502)
T 4g6h_A 168 EP 169 (502)
T ss_dssp EE
T ss_pred cc
Confidence 65
No 193
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.59 E-value=3.8e-07 Score=93.30 Aligned_cols=96 Identities=19% Similarity=0.241 Sum_probs=76.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcce
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (476)
.+|+|||||+.|+.+|..|++.|.+|+|+|+.......
T Consensus 184 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------------------------------------------ 221 (478)
T 1v59_A 184 KRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGAS------------------------------------------ 221 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSSS------------------------------------------
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccccc------------------------------------------
Confidence 58999999999999999999999999999987632211
Q ss_pred ecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEE--cCCceEEEEec-----CceEEECceEEEccCCCC
Q 011835 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITE--STSGHRLVACE-----HDMIVPCRLATVASGAAS 247 (476)
Q Consensus 188 i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~--~~~~~~~v~~~-----~g~~i~a~~vV~A~G~~S 247 (476)
.+ ..+.+.+.+.+++.||+++ +++|+++.. +++ .+.|.+. +++++.+|.||.|+|..+
T Consensus 222 ~~-~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~-~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p 287 (478)
T 1v59_A 222 MD-GEVAKATQKFLKKQGLDFKLSTKVISAKRNDDKN-VVEIVVEDTKTNKQENLEAEVLLVAVGRRP 287 (478)
T ss_dssp SC-HHHHHHHHHHHHHTTCEEECSEEEEEEEEETTTT-EEEEEEEETTTTEEEEEEESEEEECSCEEE
T ss_pred cC-HHHHHHHHHHHHHCCCEEEeCCEEEEEEEecCCC-eEEEEEEEcCCCCceEEECCEEEECCCCCc
Confidence 12 2355667777888999999 999999987 444 5666665 457899999999999665
No 194
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.59 E-value=2.9e-07 Score=94.58 Aligned_cols=98 Identities=15% Similarity=0.224 Sum_probs=79.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHc---CCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccC
Q 011835 108 LDLVVIGCGPAGLALAAESAKL---GLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRA 184 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~---G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (476)
..|+|||||..|+-+|..|++. |.+|+|+++.......
T Consensus 192 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~--------------------------------------- 232 (495)
T 2wpf_A 192 RRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILRG--------------------------------------- 232 (495)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCTT---------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccccc---------------------------------------
Confidence 4899999999999999999999 9999999986532211
Q ss_pred cceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCCC
Q 011835 185 YGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASG 248 (476)
Q Consensus 185 ~~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S~ 248 (476)
++. .+.+.+.+.+++.||+++ +++|++++.++++.+.|.+.+|+++.+|.||.|+|..+.
T Consensus 233 ---~d~-~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~ 293 (495)
T 2wpf_A 233 ---FDE-TIREEVTKQLTANGIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGRIPR 293 (495)
T ss_dssp ---SCH-HHHHHHHHHHHHTTCEEEESCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEEC
T ss_pred ---cCH-HHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCceEEEEECCCcEEEcCEEEECCCCccc
Confidence 122 355566777888999999 999999988765457788888888999999999997653
No 195
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.58 E-value=2.8e-07 Score=94.53 Aligned_cols=98 Identities=16% Similarity=0.176 Sum_probs=80.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHc---CCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccC
Q 011835 108 LDLVVIGCGPAGLALAAESAKL---GLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRA 184 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~---G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (476)
.+|+|||||+.|+-+|..|++. |.+|+|+|+.......
T Consensus 188 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~--------------------------------------- 228 (490)
T 1fec_A 188 KRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILRG--------------------------------------- 228 (490)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSSTT---------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcccc---------------------------------------
Confidence 4899999999999999999999 9999999986632211
Q ss_pred cceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCCC
Q 011835 185 YGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASG 248 (476)
Q Consensus 185 ~~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S~ 248 (476)
++. .+.+.+.+.+++.||+++ +++|+++..++++.+.|.+.+|+++.+|.||.|+|..+.
T Consensus 229 ---~d~-~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~ 289 (490)
T 1fec_A 229 ---FDS-ELRKQLTEQLRANGINVRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGRVPR 289 (490)
T ss_dssp ---SCH-HHHHHHHHHHHHTTEEEEETCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEES
T ss_pred ---cCH-HHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEECCCcEEEcCEEEEccCCCcC
Confidence 122 355667777888999999 999999988765457788888888999999999997664
No 196
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.57 E-value=3.9e-07 Score=94.24 Aligned_cols=99 Identities=15% Similarity=0.187 Sum_probs=80.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcce
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (476)
..|+|||||..|+.+|..|++.|.+|+|+++.......
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~------------------------------------------ 252 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKLI------------------------------------------ 252 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTTC------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccccc------------------------------------------
Confidence 57999999999999999999999999999986632111
Q ss_pred ecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCce---EEEEecCce-EEECceEEEccCCCCCC
Q 011835 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGH---RLVACEHDM-IVPCRLATVASGAASGK 249 (476)
Q Consensus 188 i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~---~~v~~~~g~-~i~a~~vV~A~G~~S~~ 249 (476)
.+ ..+.+.|.+.+++.||+++ +++|+++..++++. +.|.+.+|+ ++.+|.||.|+|..+..
T Consensus 253 ~~-~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p~~ 318 (523)
T 1mo9_A 253 KD-NETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQPRS 318 (523)
T ss_dssp CS-HHHHHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCEECC
T ss_pred cc-HHHHHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCccCC
Confidence 12 2356667788888999999 99999999865532 667888887 89999999999987743
No 197
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.56 E-value=1.2e-07 Score=97.46 Aligned_cols=33 Identities=36% Similarity=0.575 Sum_probs=30.9
Q ss_pred CcccEEEECCCHHHHHHHHHHHH-cCCcEEEECC
Q 011835 106 GILDLVVIGCGPAGLALAAESAK-LGLNVGLIGP 138 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~-~G~~V~liE~ 138 (476)
..+||+||||||||+++|+.|++ .|++|+|||+
T Consensus 6 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 39 (495)
T 2wpf_A 6 KAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDV 39 (495)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred cccCEEEECCChhHHHHHHHHHHhcCCeEEEEec
Confidence 35899999999999999999999 9999999993
No 198
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.56 E-value=3.3e-07 Score=91.71 Aligned_cols=93 Identities=20% Similarity=0.317 Sum_probs=75.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcce
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (476)
.+|+|||||+.|+-+|..|++.|.+|+|+|+....... .
T Consensus 146 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-----------------------------------------~ 184 (408)
T 2gqw_A 146 SRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSR-----------------------------------------A 184 (408)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT-----------------------------------------T
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccc-----------------------------------------c
Confidence 58999999999999999999999999999986632111 0
Q ss_pred ecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCC
Q 011835 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAAS 247 (476)
Q Consensus 188 i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S 247 (476)
++ ..+.+.+.+.+++.||+++ +++|++++ ++ .|.+.+|+++.+|.||.|+|..+
T Consensus 185 ~~-~~~~~~l~~~l~~~GV~i~~~~~v~~i~--~~---~v~~~~g~~i~~D~vi~a~G~~p 239 (408)
T 2gqw_A 185 AP-ATLADFVARYHAAQGVDLRFERSVTGSV--DG---VVLLDDGTRIAADMVVVGIGVLA 239 (408)
T ss_dssp SC-HHHHHHHHHHHHHTTCEEEESCCEEEEE--TT---EEEETTSCEEECSEEEECSCEEE
T ss_pred cC-HHHHHHHHHHHHHcCcEEEeCCEEEEEE--CC---EEEECCCCEEEcCEEEECcCCCc
Confidence 11 2355666777888999999 99999998 33 56778888999999999999765
No 199
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.53 E-value=6.4e-07 Score=91.47 Aligned_cols=99 Identities=20% Similarity=0.278 Sum_probs=77.5
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcce
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (476)
.+|+|||||+.|+.+|..|++.|.+|+|+|+....... .
T Consensus 179 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-----------------------------------------~ 217 (474)
T 1zmd_A 179 EKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGV-----------------------------------------G 217 (474)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCS-----------------------------------------S
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCc-----------------------------------------c
Confidence 47999999999999999999999999999987632210 0
Q ss_pred ecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEe-----cCceEEECceEEEccCCCCC
Q 011835 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVAC-----EHDMIVPCRLATVASGAASG 248 (476)
Q Consensus 188 i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~-----~~g~~i~a~~vV~A~G~~S~ 248 (476)
++ ..+.+.+.+.+++.||+++ +++|+++..++++.+.+.+ .+++++.+|.||.|+|..+.
T Consensus 218 ~~-~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~p~ 283 (474)
T 1zmd_A 218 ID-MEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPF 283 (474)
T ss_dssp CC-HHHHHHHHHHHHHTTCEEECSEEEEEEEECTTSCEEEEEEETTSCCCEEEEESEEEECSCEEEC
T ss_pred cC-HHHHHHHHHHHHHCCCEEEeCceEEEEEEcCCceEEEEEEecCCCCceEEEcCEEEECcCCCcC
Confidence 22 2355667777888999999 9999999987663255553 45678999999999997653
No 200
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.53 E-value=3.1e-07 Score=94.08 Aligned_cols=97 Identities=18% Similarity=0.153 Sum_probs=77.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcce
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (476)
.+|+|||||+.|+-+|..|++.|.+|+|+|+.+.....
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~~------------------------------------------ 223 (482)
T 1ojt_A 186 GKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQG------------------------------------------ 223 (482)
T ss_dssp SEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc------------------------------------------
Confidence 58999999999999999999999999999986632211
Q ss_pred ecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecC----ceEEECceEEEccCCCCC
Q 011835 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEH----DMIVPCRLATVASGAASG 248 (476)
Q Consensus 188 i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~----g~~i~a~~vV~A~G~~S~ 248 (476)
.+. .+.+.+.+.+++.||+++ +++|++++.+++ .+.|.+.+ |+++.+|.||.|+|..+.
T Consensus 224 ~~~-~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~-~~~v~~~~~~~~g~~~~~D~vv~a~G~~p~ 287 (482)
T 1ojt_A 224 ADR-DLVKVWQKQNEYRFDNIMVNTKTVAVEPKED-GVYVTFEGANAPKEPQRYDAVLVAAGRAPN 287 (482)
T ss_dssp SCH-HHHHHHHHHHGGGEEEEECSCEEEEEEEETT-EEEEEEESSSCCSSCEEESCEEECCCEEEC
T ss_pred cCH-HHHHHHHHHHHhcCCEEEECCEEEEEEEcCC-eEEEEEeccCCCceEEEcCEEEECcCCCcC
Confidence 122 355566777788899999 999999988766 56677766 677899999999997663
No 201
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=98.52 E-value=2.5e-05 Score=82.94 Aligned_cols=37 Identities=27% Similarity=0.451 Sum_probs=33.4
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCC
Q 011835 105 NGILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLP 141 (476)
Q Consensus 105 ~~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~ 141 (476)
...+||+|||||++||++|+.|++.|++|+|+|+...
T Consensus 105 ~~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~ 141 (662)
T 2z3y_A 105 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDR 141 (662)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred cCCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCC
Confidence 3457999999999999999999999999999998653
No 202
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.52 E-value=5.2e-07 Score=92.06 Aligned_cols=98 Identities=17% Similarity=0.212 Sum_probs=79.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHc-CCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcc
Q 011835 108 LDLVVIGCGPAGLALAAESAKL-GLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYG 186 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~-G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (476)
.+|+|||+|+.|+-+|..|++. |.+|+++++.......
T Consensus 160 ~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~----------------------------------------- 198 (472)
T 3iwa_A 160 SKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPG----------------------------------------- 198 (472)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTT-----------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCccccc-----------------------------------------
Confidence 4899999999999999999999 9999999986532210
Q ss_pred eecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCCC
Q 011835 187 RVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASG 248 (476)
Q Consensus 187 ~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S~ 248 (476)
..+ ..+.+.+.+.+++.||+++ +++|++++.+++ .+.|.+.+|+++.+|.||.|+|..+.
T Consensus 199 ~~~-~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~-~v~v~~~~g~~i~aD~Vv~a~G~~p~ 259 (472)
T 3iwa_A 199 FTS-KSLSQMLRHDLEKNDVVVHTGEKVVRLEGENG-KVARVITDKRTLDADLVILAAGVSPN 259 (472)
T ss_dssp TSC-HHHHHHHHHHHHHTTCEEECSCCEEEEEESSS-BEEEEEESSCEEECSEEEECSCEEEC
T ss_pred ccC-HHHHHHHHHHHHhcCCEEEeCCEEEEEEccCC-eEEEEEeCCCEEEcCEEEECCCCCcC
Confidence 012 2466677788888999999 999999988665 45677888889999999999997653
No 203
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.50 E-value=4.6e-07 Score=91.94 Aligned_cols=98 Identities=19% Similarity=0.218 Sum_probs=76.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcce
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (476)
.+|+|||||+.|+.+|..|++.|.+|+|+|+....... .
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-----------------------------------------~ 188 (452)
T 2cdu_A 150 KTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLYK-----------------------------------------Y 188 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTTT-----------------------------------------T
T ss_pred CeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhhh-----------------------------------------h
Confidence 47999999999999999999999999999986532210 0
Q ss_pred ecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCCC
Q 011835 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASG 248 (476)
Q Consensus 188 i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S~ 248 (476)
++ ..+.+.+.+.+++.||+++ +++|++++.++++...+.+ +|+++.+|.||.|+|....
T Consensus 189 ~~-~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~v~~v~~-~g~~i~~D~vv~a~G~~p~ 248 (452)
T 2cdu_A 189 FD-KEFTDILAKDYEAHGVNLVLGSKVAAFEEVDDEIITKTL-DGKEIKSDIAILCIGFRPN 248 (452)
T ss_dssp SC-HHHHHHHHHHHHHTTCEEEESSCEEEEEEETTEEEEEET-TSCEEEESEEEECCCEEEC
T ss_pred hh-hhHHHHHHHHHHHCCCEEEcCCeeEEEEcCCCeEEEEEe-CCCEEECCEEEECcCCCCC
Confidence 12 2356667778888999999 9999999875553334544 7788999999999997653
No 204
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.49 E-value=7.6e-07 Score=91.53 Aligned_cols=97 Identities=20% Similarity=0.241 Sum_probs=79.5
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcce
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (476)
..|+|||||+.|+-+|..|++.|.+|+++|+.......
T Consensus 183 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~------------------------------------------ 220 (499)
T 1xdi_A 183 DHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLPY------------------------------------------ 220 (499)
T ss_dssp SSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSCC------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccc------------------------------------------
Confidence 57999999999999999999999999999986632211
Q ss_pred ecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCCC
Q 011835 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASG 248 (476)
Q Consensus 188 i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S~ 248 (476)
++. .+.+.+.+.+++.||+++ +++|++++.+++ .+.|.+.+|+++.+|.||.|+|..+.
T Consensus 221 ~d~-~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~-~v~v~~~~g~~i~aD~Vv~a~G~~p~ 280 (499)
T 1xdi_A 221 EDA-DAALVLEESFAERGVRLFKNARAASVTRTGA-GVLVTMTDGRTVEGSHALMTIGSVPN 280 (499)
T ss_dssp SSH-HHHHHHHHHHHHTTCEEETTCCEEEEEECSS-SEEEEETTSCEEEESEEEECCCEEEC
T ss_pred cCH-HHHHHHHHHHHHCCCEEEeCCEEEEEEEeCC-EEEEEECCCcEEEcCEEEECCCCCcC
Confidence 122 356667778888999999 999999998765 46777788888999999999997764
No 205
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.49 E-value=8.1e-07 Score=90.45 Aligned_cols=97 Identities=21% Similarity=0.263 Sum_probs=76.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcce
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (476)
.+|+|||||+.|+-+|..|++.|.+|+|+|+.......
T Consensus 172 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~------------------------------------------ 209 (464)
T 2a8x_A 172 KSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALPN------------------------------------------ 209 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT------------------------------------------
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCccccc------------------------------------------
Confidence 48999999999999999999999999999987632211
Q ss_pred ecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEec-Cc--eEEECceEEEccCCCCC
Q 011835 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACE-HD--MIVPCRLATVASGAASG 248 (476)
Q Consensus 188 i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~-~g--~~i~a~~vV~A~G~~S~ 248 (476)
.+. .+.+.+.+.+++.||+++ +++|++++.+++ .+.+.+. +| +++.+|.||.|+|..+.
T Consensus 210 ~~~-~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~-~~~v~~~~~g~~~~~~~D~vv~a~G~~p~ 272 (464)
T 2a8x_A 210 EDA-DVSKEIEKQFKKLGVTILTATKVESIADGGS-QVTVTVTKDGVAQELKAEKVLQAIGFAPN 272 (464)
T ss_dssp SCH-HHHHHHHHHHHHHTCEEECSCEEEEEEECSS-CEEEEEESSSCEEEEEESEEEECSCEEEC
T ss_pred cCH-HHHHHHHHHHHHcCCEEEeCcEEEEEEEcCC-eEEEEEEcCCceEEEEcCEEEECCCCCcc
Confidence 122 245556777788899999 999999987665 3556654 56 68999999999997653
No 206
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.49 E-value=6.8e-07 Score=91.54 Aligned_cols=97 Identities=19% Similarity=0.237 Sum_probs=79.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcce
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (476)
.+|+|||+|+.|+.+|..|++.|.+|+++++.......
T Consensus 192 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~------------------------------------------ 229 (484)
T 3o0h_A 192 KSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLILRN------------------------------------------ 229 (484)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT------------------------------------------
T ss_pred CcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCccccc------------------------------------------
Confidence 58999999999999999999999999999986632211
Q ss_pred ecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCCC
Q 011835 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASG 248 (476)
Q Consensus 188 i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S~ 248 (476)
.+ ..+.+.+.+.+++.||+++ +++|++++.+++ .+.|.+.+|+++.+|.||.|+|..+.
T Consensus 230 ~~-~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~-~v~v~~~~g~~i~aD~Vi~A~G~~p~ 289 (484)
T 3o0h_A 230 FD-YDLRQLLNDAMVAKGISIIYEATVSQVQSTEN-CYNVVLTNGQTICADRVMLATGRVPN 289 (484)
T ss_dssp SC-HHHHHHHHHHHHHHTCEEESSCCEEEEEECSS-SEEEEETTSCEEEESEEEECCCEEEC
T ss_pred cC-HHHHHHHHHHHHHCCCEEEeCCEEEEEEeeCC-EEEEEECCCcEEEcCEEEEeeCCCcC
Confidence 12 2355667777888899999 999999998776 46888889988999999999997653
No 207
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.48 E-value=3.9e-08 Score=105.23 Aligned_cols=98 Identities=19% Similarity=0.165 Sum_probs=66.8
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccC
Q 011835 105 NGILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRA 184 (476)
Q Consensus 105 ~~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (476)
...+||+||||||||+++|+.|++.|++|+|||+.......+ .. .. .+.
T Consensus 389 ~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~---~~-~~--~~p------------------------- 437 (690)
T 3k30_A 389 ESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRV---TQ-ES--ALP------------------------- 437 (690)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHH---HH-HH--TST-------------------------
T ss_pred cccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEe---ee-cc--CCC-------------------------
Confidence 356899999999999999999999999999999976433211 00 00 000
Q ss_pred cceecHHHHHHHHHHHHHHC-CCeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCC
Q 011835 185 YGRVSRHLLHEELLRRCVES-GVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAAS 247 (476)
Q Consensus 185 ~~~i~r~~l~~~L~~~~~~~-gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S 247 (476)
+..+...+...+.+.+.+. |++++ ++.|+ ..++.++.+|.||+|+|+..
T Consensus 438 -~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~-------------~~~~~~~~~d~lvlAtG~~~ 488 (690)
T 3k30_A 438 -GLSAWGRVKEYREAVLAELPNVEIYRESPMT-------------GDDIVEFGFEHVITATGATW 488 (690)
T ss_dssp -TCGGGGHHHHHHHHHHHTCTTEEEESSCCCC-------------HHHHHHTTCCEEEECCCEEE
T ss_pred -chhHHHHHHHHHHHHHHHcCCCEEEECCeec-------------HHHHhhcCCCEEEEcCCCcc
Confidence 0112334566667777776 89988 65432 12334578999999999764
No 208
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.48 E-value=6.7e-07 Score=90.76 Aligned_cols=96 Identities=16% Similarity=0.206 Sum_probs=77.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcce
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (476)
..|+|||+|..|+-+|..|++.|.+|+++++....... .
T Consensus 148 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-----------------------------------------~ 186 (452)
T 3oc4_A 148 QTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLPK-----------------------------------------Y 186 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT-----------------------------------------T
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCccccc-----------------------------------------c
Confidence 47999999999999999999999999999986632211 0
Q ss_pred ecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCC
Q 011835 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAAS 247 (476)
Q Consensus 188 i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S 247 (476)
++ ..+.+.+.+.+++.||+++ +++|++++.+++ .+.|.+.++ ++.+|.||.|+|...
T Consensus 187 ~d-~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~-~v~v~~~~g-~i~aD~Vv~A~G~~p 244 (452)
T 3oc4_A 187 FD-KEMVAEVQKSLEKQAVIFHFEETVLGIEETAN-GIVLETSEQ-EISCDSGIFALNLHP 244 (452)
T ss_dssp CC-HHHHHHHHHHHHTTTEEEEETCCEEEEEECSS-CEEEEESSC-EEEESEEEECSCCBC
T ss_pred CC-HHHHHHHHHHHHHcCCEEEeCCEEEEEEccCC-eEEEEECCC-EEEeCEEEECcCCCC
Confidence 22 2356677788888999999 999999997666 347777777 899999999999766
No 209
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.48 E-value=9.8e-07 Score=89.92 Aligned_cols=97 Identities=23% Similarity=0.278 Sum_probs=76.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcce
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (476)
..|+|||||+.|+-+|..|++.|.+|+|+|+.......
T Consensus 175 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~------------------------------------------ 212 (468)
T 2qae_A 175 KTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAPT------------------------------------------ 212 (468)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT------------------------------------------
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCccccc------------------------------------------
Confidence 58999999999999999999999999999987632211
Q ss_pred ecHHHHHHHHHHHH-HHCCCeEE-EEEEEEEEEcCCceEEEEec--Cc--eEEECceEEEccCCCCC
Q 011835 188 VSRHLLHEELLRRC-VESGVSYL-SSKVESITESTSGHRLVACE--HD--MIVPCRLATVASGAASG 248 (476)
Q Consensus 188 i~r~~l~~~L~~~~-~~~gv~i~-~~~v~~i~~~~~~~~~v~~~--~g--~~i~a~~vV~A~G~~S~ 248 (476)
++ ..+.+.+.+.+ ++.||+++ +++|++++.+++ .+.+.+. +| +++.+|.||.|+|..+.
T Consensus 213 ~d-~~~~~~l~~~l~~~~gv~i~~~~~v~~i~~~~~-~~~v~~~~~~g~~~~i~~D~vv~a~G~~p~ 277 (468)
T 2qae_A 213 LD-EDVTNALVGALAKNEKMKFMTSTKVVGGTNNGD-SVSLEVEGKNGKRETVTCEALLVSVGRRPF 277 (468)
T ss_dssp SC-HHHHHHHHHHHHHHTCCEEECSCEEEEEEECSS-SEEEEEECC---EEEEEESEEEECSCEEEC
T ss_pred CC-HHHHHHHHHHHhhcCCcEEEeCCEEEEEEEcCC-eEEEEEEcCCCceEEEECCEEEECCCcccC
Confidence 12 23556677778 88999999 999999988765 3556655 56 67999999999997763
No 210
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.47 E-value=7.5e-07 Score=91.41 Aligned_cols=98 Identities=20% Similarity=0.246 Sum_probs=77.8
Q ss_pred ccEEEECCCHHHHHHHHHHHH----cCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEecc
Q 011835 108 LDLVVIGCGPAGLALAAESAK----LGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGR 183 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~----~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (476)
..|+|||||+.|+-+|..|++ .|.+|+++++.......
T Consensus 181 ~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~~-------------------------------------- 222 (493)
T 1m6i_A 181 KSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGK-------------------------------------- 222 (493)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTTT--------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCcccccc--------------------------------------
Confidence 479999999999999999987 58899999875421100
Q ss_pred CcceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCCC
Q 011835 184 AYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASG 248 (476)
Q Consensus 184 ~~~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S~ 248 (476)
.+. ..+.+.+.+.+++.||+++ +++|+.++.+++ .+.|.+.+|+++.+|.||.|+|..+.
T Consensus 223 ---~l~-~~~~~~~~~~l~~~GV~v~~~~~V~~i~~~~~-~~~v~l~dG~~i~aD~Vv~a~G~~pn 283 (493)
T 1m6i_A 223 ---ILP-EYLSNWTMEKVRREGVKVMPNAIVQSVGVSSG-KLLIKLKDGRKVETDHIVAAVGLEPN 283 (493)
T ss_dssp ---TSC-HHHHHHHHHHHHTTTCEEECSCCEEEEEEETT-EEEEEETTSCEEEESEEEECCCEEEC
T ss_pred ---cCC-HHHHHHHHHHHHhcCCEEEeCCEEEEEEecCC-eEEEEECCCCEEECCEEEECCCCCcc
Confidence 022 3466667788888999999 999999987655 56788889999999999999997663
No 211
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.47 E-value=2.3e-07 Score=89.94 Aligned_cols=37 Identities=30% Similarity=0.490 Sum_probs=32.6
Q ss_pred CcccEEEECCCHHHHHHHHHHHH--cCCcEEEECCCCCC
Q 011835 106 GILDLVVIGCGPAGLALAAESAK--LGLNVGLIGPDLPF 142 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~--~G~~V~liE~~~~~ 142 (476)
.++||+|||||||||+||++|++ .|++|+|||+....
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~ 102 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAP 102 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSC
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCC
Confidence 45899999999999999999985 59999999987543
No 212
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.47 E-value=4.9e-07 Score=91.92 Aligned_cols=95 Identities=21% Similarity=0.237 Sum_probs=73.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcce
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (476)
.+|+|||||++|+.+|..|++.|.+|+|+|+.......
T Consensus 172 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------------------------------------------ 209 (458)
T 1lvl_A 172 QHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILPT------------------------------------------ 209 (458)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT------------------------------------------
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCccccc------------------------------------------
Confidence 47999999999999999999999999999987642211
Q ss_pred ecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCc--eEEECceEEEccCCCCC
Q 011835 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHD--MIVPCRLATVASGAASG 248 (476)
Q Consensus 188 i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g--~~i~a~~vV~A~G~~S~ 248 (476)
.+ ..+.+.+.+.+++.||+++ +++|+.++. + .+.+...+| .++.+|.||.|+|..+.
T Consensus 210 ~~-~~~~~~l~~~l~~~gv~i~~~~~v~~i~~--~-~v~v~~~~G~~~~i~~D~vv~a~G~~p~ 269 (458)
T 1lvl_A 210 YD-SELTAPVAESLKKLGIALHLGHSVEGYEN--G-CLLANDGKGGQLRLEADRVLVAVGRRPR 269 (458)
T ss_dssp SC-HHHHHHHHHHHHHHTCEEETTCEEEEEET--T-EEEEECSSSCCCEECCSCEEECCCEEEC
T ss_pred cC-HHHHHHHHHHHHHCCCEEEECCEEEEEEe--C-CEEEEECCCceEEEECCEEEECcCCCcC
Confidence 11 2355566777788899999 999999986 3 244554456 68999999999997653
No 213
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.46 E-value=1e-06 Score=89.62 Aligned_cols=98 Identities=17% Similarity=0.259 Sum_probs=80.2
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcc
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYG 186 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (476)
..+|+|||+|+.|+-+|..|++.|.+|+++++.......
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l~~----------------------------------------- 208 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEILSR----------------------------------------- 208 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccc-----------------------------------------
Confidence 358999999999999999999999999999986632211
Q ss_pred eecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEE-ecCceEEECceEEEccCCCCC
Q 011835 187 RVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVA-CEHDMIVPCRLATVASGAASG 248 (476)
Q Consensus 187 ~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~-~~~g~~i~a~~vV~A~G~~S~ 248 (476)
++. .+.+.+.+.+++.||+++ +++|++++.++++.+.|. +.+|+ +.+|.||.|+|..+.
T Consensus 209 -~~~-~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~g~-i~aD~Vv~a~G~~p~ 269 (463)
T 4dna_A 209 -FDQ-DMRRGLHAAMEEKGIRILCEDIIQSVSADADGRRVATTMKHGE-IVADQVMLALGRMPN 269 (463)
T ss_dssp -SCH-HHHHHHHHHHHHTTCEEECSCCEEEEEECTTSCEEEEESSSCE-EEESEEEECSCEEES
T ss_pred -cCH-HHHHHHHHHHHHCCCEEECCCEEEEEEEcCCCEEEEEEcCCCe-EEeCEEEEeeCcccC
Confidence 222 356677788888999999 999999998766556788 88888 999999999997653
No 214
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.46 E-value=8.3e-07 Score=85.37 Aligned_cols=94 Identities=20% Similarity=0.219 Sum_probs=74.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcce
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (476)
..|+|||+|+.|+-+|..|++.|.+|+++++.....
T Consensus 146 ~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-------------------------------------------- 181 (320)
T 1trb_A 146 QKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFR-------------------------------------------- 181 (320)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCC--------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCccc--------------------------------------------
Confidence 479999999999999999999999999998865210
Q ss_pred ecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecC----c--eEEECceEEEccCCC
Q 011835 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEH----D--MIVPCRLATVASGAA 246 (476)
Q Consensus 188 i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~----g--~~i~a~~vV~A~G~~ 246 (476)
....+.+.+.+.+++.||+++ +++|+++..++++...|.+.+ | .++.+|.||.|+|..
T Consensus 182 -~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~ 246 (320)
T 1trb_A 182 -AEKILIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHS 246 (320)
T ss_dssp -CCHHHHHHHHHHHHTSSEEEECSCEEEEEEECSSSEEEEEEECCTTCCCCEEEECSEEEECSCEE
T ss_pred -cCHHHHHHHHHhcccCCeEEEcCceeEEEEcCCCceEEEEEEeccCCCceEEEEcCEEEEEeCCC
Confidence 012345556677788999999 999999988765455566654 4 579999999999944
No 215
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.45 E-value=1.4e-06 Score=89.31 Aligned_cols=96 Identities=21% Similarity=0.309 Sum_probs=76.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcce
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (476)
.+|+|||||+.|+-+|..|++.|.+|+|+++.......
T Consensus 199 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~------------------------------------------ 236 (491)
T 3urh_A 199 ASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILGG------------------------------------------ 236 (491)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSSS------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEecccccccc------------------------------------------
Confidence 47999999999999999999999999999986642211
Q ss_pred ecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecC---c--eEEECceEEEccCCCC
Q 011835 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEH---D--MIVPCRLATVASGAAS 247 (476)
Q Consensus 188 i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~---g--~~i~a~~vV~A~G~~S 247 (476)
.+ ..+.+.+.+.+++.||+++ +++|++++.+++ .+.+.+.+ | +++.+|.||.|+|...
T Consensus 237 ~d-~~~~~~l~~~l~~~gV~v~~~~~v~~i~~~~~-~~~v~~~~~~~g~~~~i~~D~Vi~a~G~~p 300 (491)
T 3urh_A 237 MD-GEVAKQLQRMLTKQGIDFKLGAKVTGAVKSGD-GAKVTFEPVKGGEATTLDAEVVLIATGRKP 300 (491)
T ss_dssp SC-HHHHHHHHHHHHHTTCEEECSEEEEEEEEETT-EEEEEEEETTSCCCEEEEESEEEECCCCEE
T ss_pred CC-HHHHHHHHHHHHhCCCEEEECCeEEEEEEeCC-EEEEEEEecCCCceEEEEcCEEEEeeCCcc
Confidence 12 2355666777888999999 999999998776 55566553 4 6899999999999765
No 216
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.45 E-value=7.4e-07 Score=90.88 Aligned_cols=97 Identities=20% Similarity=0.305 Sum_probs=76.5
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcce
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (476)
.+|+|||||+.|+-+|..|++.|.+|+|+|+.......
T Consensus 178 ~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~------------------------------------------ 215 (470)
T 1dxl_A 178 KKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVPT------------------------------------------ 215 (470)
T ss_dssp SEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccc------------------------------------------
Confidence 58999999999999999999999999999987632211
Q ss_pred ecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEec---Cc--eEEECceEEEccCCCCC
Q 011835 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACE---HD--MIVPCRLATVASGAASG 248 (476)
Q Consensus 188 i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~---~g--~~i~a~~vV~A~G~~S~ 248 (476)
.+ ..+.+.+.+.+++.||+++ +++|++++.+++ .+.+.+. +| +++.+|.||.|+|..+.
T Consensus 216 ~~-~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~-~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~ 280 (470)
T 1dxl_A 216 MD-AEIRKQFQRSLEKQGMKFKLKTKVVGVDTSGD-GVKLTVEPSAGGEQTIIEADVVLVSAGRTPF 280 (470)
T ss_dssp SC-HHHHHHHHHHHHHSSCCEECSEEEEEEECSSS-SEEEEEEESSSCCCEEEEESEEECCCCEEEC
T ss_pred cc-HHHHHHHHHHHHHcCCEEEeCCEEEEEEEcCC-eEEEEEEecCCCcceEEECCEEEECCCCCcC
Confidence 12 2355667777888999999 999999987665 3555554 44 68999999999997653
No 217
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.45 E-value=6.1e-07 Score=92.04 Aligned_cols=96 Identities=17% Similarity=0.186 Sum_probs=74.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcce
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (476)
.+|+|||||+.|+-+|..|++.|.+|+|+|+....... .
T Consensus 195 ~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~-----------------------------------------~ 233 (490)
T 2bc0_A 195 KRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAG-----------------------------------------Y 233 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT-----------------------------------------T
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhhh-----------------------------------------H
Confidence 47999999999999999999999999999986632211 0
Q ss_pred ecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCC
Q 011835 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAAS 247 (476)
Q Consensus 188 i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S 247 (476)
++ ..+.+.+.+.+++.||+++ +++|++++.+ ++...|.+ +|+++.+|.||.|+|...
T Consensus 234 ~~-~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~-~~v~~v~~-~g~~i~~D~Vi~a~G~~p 291 (490)
T 2bc0_A 234 YD-RDLTDLMAKNMEEHGIQLAFGETVKEVAGN-GKVEKIIT-DKNEYDVDMVILAVGFRP 291 (490)
T ss_dssp SC-HHHHHHHHHHHHTTTCEEEETCCEEEEECS-SSCCEEEE-SSCEEECSEEEECCCEEE
T ss_pred HH-HHHHHHHHHHHHhCCeEEEeCCEEEEEEcC-CcEEEEEE-CCcEEECCEEEECCCCCc
Confidence 12 2355667778888999999 9999999863 32334555 677899999999999665
No 218
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.45 E-value=1.1e-06 Score=91.81 Aligned_cols=98 Identities=16% Similarity=0.219 Sum_probs=78.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcce
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (476)
.+|+|||||+.|+-+|..|++.|.+|+++++.......
T Consensus 152 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------------------------------------------ 189 (565)
T 3ntd_A 152 EHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVMTP------------------------------------------ 189 (565)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSCTT------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccchh------------------------------------------
Confidence 47999999999999999999999999999986632211
Q ss_pred ecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEc------------------CCceEEEEecCceEEECceEEEccCCCCC
Q 011835 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITES------------------TSGHRLVACEHDMIVPCRLATVASGAASG 248 (476)
Q Consensus 188 i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~------------------~~~~~~v~~~~g~~i~a~~vV~A~G~~S~ 248 (476)
.+ ..+.+.+.+.+++.||+++ +++|+++..+ +++.+.+.+.+|+++.+|.||.|+|..+.
T Consensus 190 ~~-~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~ 268 (565)
T 3ntd_A 190 VD-REMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETDLLIMAIGVRPE 268 (565)
T ss_dssp SC-HHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTSCEEEESEEEECSCEEEC
T ss_pred cC-HHHHHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcEEEEEcCCCEEEcCEEEECcCCccc
Confidence 12 2355666777888999999 9999999873 23356777888889999999999997653
No 219
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=98.44 E-value=2e-08 Score=102.06 Aligned_cols=104 Identities=15% Similarity=0.207 Sum_probs=66.5
Q ss_pred cccEEEECCCHHHHHHHHHHHH-c------CCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCE
Q 011835 107 ILDLVVIGCGPAGLALAAESAK-L------GLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPI 179 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~-~------G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (476)
.+||+||||||||+++|..|++ . |++|+|||+.+.. +|.+. .++. +.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~---gg~~~-----~gv~--------------p~---- 56 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTP---WGLVR-----SGVA--------------PD---- 56 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSC---STHHH-----HTSC--------------TT----
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCC---CCccc-----cccC--------------CC----
Confidence 4699999999999999999999 7 9999999987532 23211 1110 00
Q ss_pred EeccCcceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCCCCcccc
Q 011835 180 LIGRAYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASGKLLEY 253 (476)
Q Consensus 180 ~~~~~~~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S~~~~~~ 253 (476)
......+...+.+.+.+.|++++ +..+ +. .|.+.++ ++.+|.||+|+|+.......+
T Consensus 57 -------~~~~~~~~~~~~~~~~~~~v~~~~~v~v------~~---~v~~~~~-~~~~d~lViAtG~~~~~~~~i 114 (456)
T 1lqt_A 57 -------HPKIKSISKQFEKTAEDPRFRFFGNVVV------GE---HVQPGEL-SERYDAVIYAVGAQSDRMLNI 114 (456)
T ss_dssp -------CTGGGGGHHHHHHHHTSTTEEEEESCCB------TT---TBCHHHH-HHHSSEEEECCCCCEECCCCC
T ss_pred -------CCCHHHHHHHHHHHHhcCCCEEEeeEEE------CC---EEEECCC-eEeCCEEEEeeCCCCCCCCCC
Confidence 01112234445566677899988 6432 11 1334444 478999999999864333333
No 220
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.44 E-value=1.4e-06 Score=90.05 Aligned_cols=95 Identities=15% Similarity=0.095 Sum_probs=79.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcce
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (476)
-.++|||||+.|+-.|..+++.|.+|+|++++.. .. .
T Consensus 224 ~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~-L~------------------------------------------~ 260 (542)
T 4b1b_A 224 GKTLVVGASYVALECSGFLNSLGYDVTVAVRSIV-LR------------------------------------------G 260 (542)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCS-ST------------------------------------------T
T ss_pred ceEEEECCCHHHHHHHHHHHhcCCeEEEeccccc-cc------------------------------------------c
Confidence 4799999999999999999999999999987431 11 1
Q ss_pred ecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCC
Q 011835 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAAS 247 (476)
Q Consensus 188 i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S 247 (476)
.+. ++...+.+.+++.|++++ +..++.+...++ .+.|.+.++.++.+|.|++|+|...
T Consensus 261 ~D~-ei~~~l~~~l~~~gi~~~~~~~v~~~~~~~~-~~~v~~~~~~~~~~D~vLvAvGR~P 319 (542)
T 4b1b_A 261 FDQ-QCAVKVKLYMEEQGVMFKNGILPKKLTKMDD-KILVEFSDKTSELYDTVLYAIGRKG 319 (542)
T ss_dssp SCH-HHHHHHHHHHHHTTCEEEETCCEEEEEEETT-EEEEEETTSCEEEESEEEECSCEEE
T ss_pred cch-hHHHHHHHHHHhhcceeecceEEEEEEecCC-eEEEEEcCCCeEEEEEEEEcccccC
Confidence 233 356667788889999999 999999998877 7788888888899999999999665
No 221
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=98.43 E-value=1.8e-07 Score=99.73 Aligned_cols=95 Identities=23% Similarity=0.244 Sum_probs=63.7
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccC
Q 011835 105 NGILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRA 184 (476)
Q Consensus 105 ~~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (476)
...+||+||||||||+++|..|++.|++|+|||+....+..+. +.. .+ +..
T Consensus 371 ~~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~-----~~~-----~~-----------~~~-------- 421 (671)
T 1ps9_A 371 VQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFN-----IAK-----QI-----------PGK-------- 421 (671)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHH-----HHT-----TS-----------TTC--------
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeee-----ccc-----cC-----------CCH--------
Confidence 3457999999999999999999999999999999764432211 000 00 000
Q ss_pred cceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCceEE-ECceEEEccCCCC
Q 011835 185 YGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIV-PCRLATVASGAAS 247 (476)
Q Consensus 185 ~~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i-~a~~vV~A~G~~S 247 (476)
..-..+...+.+.+++.||+++ ++.|+. ..+ .+|.||+|+|+..
T Consensus 422 ---~~~~~~~~~~~~~~~~~gv~~~~~~~v~~----------------~~~~~~d~lviAtG~~p 467 (671)
T 1ps9_A 422 ---EEFYETLRYYRRMIEVTGVTLKLNHTVTA----------------DQLQAFDETILASGIVP 467 (671)
T ss_dssp ---TTHHHHHHHHHHHHHHHTCEEEESCCCCS----------------SSSCCSSEEEECCCEEE
T ss_pred ---HHHHHHHHHHHHHHHHcCCEEEeCcEecH----------------HHhhcCCEEEEccCCCc
Confidence 1112334455667777899998 665421 114 7999999999744
No 222
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.42 E-value=1.1e-06 Score=89.91 Aligned_cols=96 Identities=19% Similarity=0.257 Sum_probs=75.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcce
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (476)
.+|+|||||++|+.+|..|++.|.+|+|+|+.......
T Consensus 187 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------------------------------------------ 224 (480)
T 3cgb_A 187 EDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGTI------------------------------------------ 224 (480)
T ss_dssp CEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTSS------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhhc------------------------------------------
Confidence 58999999999999999999999999999986532110
Q ss_pred ecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCCC
Q 011835 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASG 248 (476)
Q Consensus 188 i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S~ 248 (476)
++ ..+.+.+.+.+++.||+++ +++|++++.+++ ...+.+. +.++.+|.||.|+|..+.
T Consensus 225 ~~-~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~-v~~v~~~-~~~i~~D~vi~a~G~~p~ 283 (480)
T 3cgb_A 225 YD-GDMAEYIYKEADKHHIEILTNENVKAFKGNER-VEAVETD-KGTYKADLVLVSVGVKPN 283 (480)
T ss_dssp SC-HHHHHHHHHHHHHTTCEEECSCCEEEEEESSB-EEEEEET-TEEEECSEEEECSCEEES
T ss_pred CC-HHHHHHHHHHHHHcCcEEEcCCEEEEEEcCCc-EEEEEEC-CCEEEcCEEEECcCCCcC
Confidence 12 2355667778888999999 999999987532 4456554 457999999999997653
No 223
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=98.41 E-value=4.5e-08 Score=99.54 Aligned_cols=99 Identities=16% Similarity=0.209 Sum_probs=65.5
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcC--CcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEecc
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLG--LNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGR 183 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G--~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (476)
..+||+||||||||+.+|..|++.| ++|+|||+.+.. +|.+. .++. +
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~---gg~~~-----~g~~--------------p--------- 53 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVP---FGLVR-----FGVA--------------P--------- 53 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSS---CTHHH-----HTSC--------------T---------
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcC---Cceee-----cccC--------------C---------
Confidence 3479999999999999999999999 999999987643 23211 1110 0
Q ss_pred CcceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCC
Q 011835 184 AYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAAS 247 (476)
Q Consensus 184 ~~~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S 247 (476)
.. .....+...+.+.+++.|++++ ++.|. . .|.+.+. ++.+|.||+|+|+..
T Consensus 54 -~~-~~~~~~~~~~~~~~~~~gv~~~~~~~v~------~---~V~~~~~-~~~~d~lVlAtGs~~ 106 (460)
T 1cjc_A 54 -DH-PEVKNVINTFTQTARSDRCAFYGNVEVG------R---DVTVQEL-QDAYHAVVLSYGAED 106 (460)
T ss_dssp -TC-GGGGGHHHHHHHHHTSTTEEEEBSCCBT------T---TBCHHHH-HHHSSEEEECCCCCE
T ss_pred -CC-ccHHHHHHHHHHHHHhCCcEEEeeeEEe------e---EEEeccc-eEEcCEEEEecCcCC
Confidence 00 0112244556677777899998 76651 1 1233332 368999999999874
No 224
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.40 E-value=2.6e-06 Score=87.03 Aligned_cols=97 Identities=19% Similarity=0.208 Sum_probs=76.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcce
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (476)
-.|+|||||+.|+-+|..|++.|.+|+|+++.......
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~------------------------------------------ 225 (478)
T 3dk9_A 188 GRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLRS------------------------------------------ 225 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT------------------------------------------
T ss_pred ccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccccc------------------------------------------
Confidence 47999999999999999999999999999986532211
Q ss_pred ecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCc-eEEEEecC-------ceEEECceEEEccCCCC
Q 011835 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSG-HRLVACEH-------DMIVPCRLATVASGAAS 247 (476)
Q Consensus 188 i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~-~~~v~~~~-------g~~i~a~~vV~A~G~~S 247 (476)
.+ ..+.+.+.+.+++.||+++ +++|+.++.++++ .+.+.+.+ |.++.+|.||.|+|...
T Consensus 226 ~d-~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p 293 (478)
T 3dk9_A 226 FD-SMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVP 293 (478)
T ss_dssp SC-HHHHHHHHHHHHHTTCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEEE
T ss_pred cC-HHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeecccc
Confidence 12 2355566777888999999 9999999987665 45676664 26789999999999655
No 225
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.40 E-value=1.9e-06 Score=88.05 Aligned_cols=96 Identities=23% Similarity=0.239 Sum_probs=76.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcce
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (476)
..|+|||||+.|+-+|..|++.|.+|+++++.......
T Consensus 181 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------------------------------------------ 218 (476)
T 3lad_A 181 GKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLPA------------------------------------------ 218 (476)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCcc------------------------------------------
Confidence 47999999999999999999999999999986632211
Q ss_pred ecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCc---eEEECceEEEccCCCC
Q 011835 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHD---MIVPCRLATVASGAAS 247 (476)
Q Consensus 188 i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g---~~i~a~~vV~A~G~~S 247 (476)
.+ ..+.+.+.+.+++.||+++ +++|++++.+++ .+.+.+.++ +++.+|.||.|+|...
T Consensus 219 ~~-~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~~-~~~v~~~~~~g~~~~~~D~vi~a~G~~p 280 (476)
T 3lad_A 219 VD-EQVAKEAQKILTKQGLKILLGARVTGTEVKNK-QVTVKFVDAEGEKSQAFDKLIVAVGRRP 280 (476)
T ss_dssp SC-HHHHHHHHHHHHHTTEEEEETCEEEEEEECSS-CEEEEEESSSEEEEEEESEEEECSCEEE
T ss_pred cC-HHHHHHHHHHHHhCCCEEEECCEEEEEEEcCC-EEEEEEEeCCCcEEEECCEEEEeeCCcc
Confidence 12 2355666777888999999 999999998766 455666654 6799999999999654
No 226
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.36 E-value=2.5e-06 Score=86.93 Aligned_cols=95 Identities=19% Similarity=0.246 Sum_probs=76.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcce
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (476)
..|+|||||+.|+-+|..|++.|.+|+++++......
T Consensus 177 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~------------------------------------------- 213 (467)
T 1zk7_A 177 ERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFFR------------------------------------------- 213 (467)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT-------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccCC-------------------------------------------
Confidence 4799999999999999999999999999998653211
Q ss_pred ecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCCC
Q 011835 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASG 248 (476)
Q Consensus 188 i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S~ 248 (476)
.+ ..+.+.+.+.+++.||+++ +++|++++.+++ .+.|.+. +.++.+|.||.|+|..+.
T Consensus 214 ~~-~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~-~~~v~~~-~~~i~aD~Vv~a~G~~p~ 272 (467)
T 1zk7_A 214 ED-PAIGEAVTAAFRAEGIEVLEHTQASQVAHMDG-EFVLTTT-HGELRADKLLVATGRTPN 272 (467)
T ss_dssp SC-HHHHHHHHHHHHHTTCEEETTCCEEEEEEETT-EEEEEET-TEEEEESEEEECSCEEES
T ss_pred CC-HHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCC-EEEEEEC-CcEEEcCEEEECCCCCcC
Confidence 11 2356667777888999999 999999987665 5666666 457999999999997763
No 227
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.36 E-value=2.8e-06 Score=87.11 Aligned_cols=95 Identities=19% Similarity=0.189 Sum_probs=75.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcce
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (476)
-+|+|||||+.|+.+|..|++.|.+|+|+++.......
T Consensus 175 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~------------------------------------------ 212 (492)
T 3ic9_A 175 KSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVANL------------------------------------------ 212 (492)
T ss_dssp SEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTTC------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc------------------------------------------
Confidence 57999999999999999999999999999987642211
Q ss_pred ecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEec--Cc--eEEECceEEEccCCCC
Q 011835 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACE--HD--MIVPCRLATVASGAAS 247 (476)
Q Consensus 188 i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~--~g--~~i~a~~vV~A~G~~S 247 (476)
.+. .+.+.+.+.+++. |+++ +++|+.++.+++ .+.+.+. +| .++.+|.||.|+|...
T Consensus 213 ~d~-~~~~~l~~~l~~~-V~i~~~~~v~~i~~~~~-~v~v~~~~~~G~~~~i~~D~Vi~a~G~~p 274 (492)
T 3ic9_A 213 QDE-EMKRYAEKTFNEE-FYFDAKARVISTIEKED-AVEVIYFDKSGQKTTESFQYVLAATGRKA 274 (492)
T ss_dssp CCH-HHHHHHHHHHHTT-SEEETTCEEEEEEECSS-SEEEEEECTTCCEEEEEESEEEECSCCEE
T ss_pred CCH-HHHHHHHHHHhhC-cEEEECCEEEEEEEcCC-EEEEEEEeCCCceEEEECCEEEEeeCCcc
Confidence 122 3555666667766 9999 999999998776 4556664 66 6899999999999765
No 228
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.35 E-value=2.1e-06 Score=83.06 Aligned_cols=93 Identities=13% Similarity=0.189 Sum_probs=72.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcce
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (476)
.+|+|||+|..|+-+|..|++.|.+|+++++...+..
T Consensus 153 ~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~~------------------------------------------- 189 (335)
T 2zbw_A 153 KRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFRA------------------------------------------- 189 (335)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCCS-------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccCc-------------------------------------------
Confidence 5799999999999999999999999999988653210
Q ss_pred ecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEec---Cc--eEEECceEEEccCCC
Q 011835 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACE---HD--MIVPCRLATVASGAA 246 (476)
Q Consensus 188 i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~---~g--~~i~a~~vV~A~G~~ 246 (476)
...+.+.|.+.+++.||+++ +++++.+..+ ++...|.+. +| .++.+|.||.|+|..
T Consensus 190 --~~~~~~~l~~~l~~~gv~v~~~~~v~~i~~~-~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 251 (335)
T 2zbw_A 190 --HEASVKELMKAHEEGRLEVLTPYELRRVEGD-ERVRWAVVFHNQTQEELALEVDAVLILAGYI 251 (335)
T ss_dssp --CHHHHHHHHHHHHTTSSEEETTEEEEEEEES-SSEEEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred --cHHHHHHHHhccccCCeEEecCCcceeEccC-CCeeEEEEEECCCCceEEEecCEEEEeecCC
Confidence 01233456667778899999 9999999885 335566665 66 679999999999943
No 229
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.35 E-value=1.5e-06 Score=85.62 Aligned_cols=91 Identities=23% Similarity=0.315 Sum_probs=72.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcce
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (476)
.+|+|||||+.|+.+|..|++.|.+|+|+|+.+....
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~------------------------------------------- 180 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFLG------------------------------------------- 180 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCTT-------------------------------------------
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeecc-------------------------------------------
Confidence 4799999999999999999999999999998653211
Q ss_pred ecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCCC
Q 011835 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASG 248 (476)
Q Consensus 188 i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S~ 248 (476)
++ ..+.+.+.+.+++.||+++ +++|++++ .+ .|.+++|+ +.+|.||.|+|..+.
T Consensus 181 ~~-~~~~~~l~~~l~~~gV~i~~~~~v~~i~--~~---~v~~~~g~-i~~D~vi~a~G~~p~ 235 (367)
T 1xhc_A 181 LD-EELSNMIKDMLEETGVKFFLNSELLEAN--EE---GVLTNSGF-IEGKVKICAIGIVPN 235 (367)
T ss_dssp CC-HHHHHHHHHHHHHTTEEEECSCCEEEEC--SS---EEEETTEE-EECSCEEEECCEEEC
T ss_pred CC-HHHHHHHHHHHHHCCCEEEcCCEEEEEE--ee---EEEECCCE-EEcCEEEECcCCCcC
Confidence 11 2355566777888999999 99999987 22 46677887 999999999996653
No 230
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.33 E-value=2.6e-06 Score=87.09 Aligned_cols=96 Identities=19% Similarity=0.190 Sum_probs=75.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcce
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (476)
-+|+|||||+.|+-+|..|++.|.+|+++++... ...
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~-l~~------------------------------------------ 224 (483)
T 3dgh_A 188 GKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSIV-LRG------------------------------------------ 224 (483)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCS-STT------------------------------------------
T ss_pred CcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCC-Ccc------------------------------------------
Confidence 4799999999999999999999999999987421 100
Q ss_pred ecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCce-----EEECceEEEccCCCC
Q 011835 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDM-----IVPCRLATVASGAAS 247 (476)
Q Consensus 188 i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~-----~i~a~~vV~A~G~~S 247 (476)
++ ..+.+.+.+.+++.||+++ +++|++++.++++.+.|.+.++. ++.+|.||.|+|...
T Consensus 225 ~d-~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~p 289 (483)
T 3dgh_A 225 FD-QQMAELVAASMEERGIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGRKG 289 (483)
T ss_dssp SC-HHHHHHHHHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEECSCEEE
T ss_pred cC-HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEECccccc
Confidence 12 2355666777888999999 99999999866545667666542 789999999999654
No 231
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.32 E-value=2.7e-06 Score=89.24 Aligned_cols=95 Identities=15% Similarity=0.227 Sum_probs=76.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcce
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (476)
.+|+|||||+.|+.+|..|++.|.+|+++++.......
T Consensus 188 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------------------------------------------ 225 (588)
T 3ics_A 188 RHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMPP------------------------------------------ 225 (588)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccccc------------------------------------------
Confidence 47999999999999999999999999999986532111
Q ss_pred ecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCCC
Q 011835 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASG 248 (476)
Q Consensus 188 i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S~ 248 (476)
.+ ..+.+.+.+.+++.||+++ +++|+.++.+++ .|.+.+|+++.+|.||.|+|..+.
T Consensus 226 ~~-~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~---~v~~~~g~~i~~D~Vi~a~G~~p~ 283 (588)
T 3ics_A 226 ID-YEMAAYVHEHMKNHDVELVFEDGVDALEENGA---VVRLKSGSVIQTDMLILAIGVQPE 283 (588)
T ss_dssp SC-HHHHHHHHHHHHHTTCEEECSCCEEEEEGGGT---EEEETTSCEEECSEEEECSCEEEC
T ss_pred CC-HHHHHHHHHHHHHcCCEEEECCeEEEEecCCC---EEEECCCCEEEcCEEEEccCCCCC
Confidence 12 2355666777888999999 999999987644 467788889999999999997653
No 232
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.30 E-value=1.8e-06 Score=84.66 Aligned_cols=95 Identities=20% Similarity=0.190 Sum_probs=72.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcce
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (476)
.+|+|||+|+.|+-+|..|++.|.+|+++++...+...
T Consensus 164 ~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~------------------------------------------ 201 (360)
T 3ab1_A 164 KRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQGH------------------------------------------ 201 (360)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCSSC------------------------------------------
T ss_pred CcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCCCC------------------------------------------
Confidence 47999999999999999999999999999886532110
Q ss_pred ecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEec--Cc--eEEECceEEEccCCCC
Q 011835 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACE--HD--MIVPCRLATVASGAAS 247 (476)
Q Consensus 188 i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~--~g--~~i~a~~vV~A~G~~S 247 (476)
..+.+.|.+..++.||+++ +++|+++..++++...|.+. +| .++.+|.||.|+|..+
T Consensus 202 ---~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~g~~~~i~~D~vi~a~G~~p 263 (360)
T 3ab1_A 202 ---GKTAHEVERARANGTIDVYLETEVASIEESNGVLTRVHLRSSDGSKWTVEADRLLILIGFKS 263 (360)
T ss_dssp ---SHHHHSSHHHHHHTSEEEESSEEEEEEEEETTEEEEEEEEETTCCEEEEECSEEEECCCBCC
T ss_pred ---HHHHHHHHHHhhcCceEEEcCcCHHHhccCCCceEEEEEEecCCCeEEEeCCEEEECCCCCC
Confidence 0123344556677899999 99999999876644456553 66 6799999999999543
No 233
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=98.27 E-value=3.1e-07 Score=98.74 Aligned_cols=38 Identities=21% Similarity=0.329 Sum_probs=34.3
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCC
Q 011835 105 NGILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPF 142 (476)
Q Consensus 105 ~~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~ 142 (476)
...+||+||||||||+++|..|++.|++|+|||+....
T Consensus 387 ~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~ 424 (729)
T 1o94_A 387 KNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKI 424 (729)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred cCCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCc
Confidence 34579999999999999999999999999999997653
No 234
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.27 E-value=5.8e-06 Score=84.69 Aligned_cols=96 Identities=15% Similarity=0.173 Sum_probs=74.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcce
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (476)
-.|+|||||+.|+-+|..|++.|.+|+++++... ...
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~-l~~------------------------------------------ 222 (488)
T 3dgz_A 186 GKTLVVGASYVALECAGFLTGIGLDTTVMMRSIP-LRG------------------------------------------ 222 (488)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCS-STT------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEEcCcc-ccc------------------------------------------
Confidence 4799999999999999999999999999987531 100
Q ss_pred ecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecC---ce--EEECceEEEccCCCC
Q 011835 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEH---DM--IVPCRLATVASGAAS 247 (476)
Q Consensus 188 i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~---g~--~i~a~~vV~A~G~~S 247 (476)
++. .+.+.+.+.+++.||+++ ++.++.+...+++.+.|.+.+ |+ ++.+|.||.|+|...
T Consensus 223 ~d~-~~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~~p 287 (488)
T 3dgz_A 223 FDQ-QMSSLVTEHMESHGTQFLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGRVP 287 (488)
T ss_dssp SCH-HHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEESEEEECSCEEE
T ss_pred CCH-HHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEEEcccCCc
Confidence 222 355667777888999999 999999988555455666554 54 578999999999655
No 235
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.26 E-value=1.9e-06 Score=87.02 Aligned_cols=92 Identities=13% Similarity=0.207 Sum_probs=72.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcce
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (476)
.+|+|||||+.|+-+|..+++.|.+|+|+|+........
T Consensus 148 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~~----------------------------------------- 186 (437)
T 4eqs_A 148 DKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKLM----------------------------------------- 186 (437)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCSTTS-----------------------------------------
T ss_pred cEEEEECCccchhhhHHHHHhcCCcceeeeeeccccccc-----------------------------------------
Confidence 479999999999999999999999999999866432221
Q ss_pred ecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCC
Q 011835 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAAS 247 (476)
Q Consensus 188 i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S 247 (476)
+ ..+.+.+.+.+++.||+++ +++|+.++. ..+.+++|+++.+|.||.|.|...
T Consensus 187 -d-~~~~~~~~~~l~~~gV~i~~~~~v~~~~~-----~~v~~~~g~~~~~D~vl~a~G~~P 240 (437)
T 4eqs_A 187 -D-ADMNQPILDELDKREIPYRLNEEINAING-----NEITFKSGKVEHYDMIIEGVGTHP 240 (437)
T ss_dssp -C-GGGGHHHHHHHHHTTCCEEESCCEEEEET-----TEEEETTSCEEECSEEEECCCEEE
T ss_pred -c-chhHHHHHHHhhccceEEEeccEEEEecC-----CeeeecCCeEEeeeeEEEEeceec
Confidence 1 1133445667788999999 999988753 246778999999999999999654
No 236
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.26 E-value=4.4e-06 Score=80.75 Aligned_cols=90 Identities=16% Similarity=0.103 Sum_probs=70.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcce
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (476)
..|+|||+|+.|+-+|..|++.|.+|+++++......
T Consensus 174 ~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~~------------------------------------------- 210 (338)
T 3itj_A 174 KPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRA------------------------------------------- 210 (338)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS-------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccCC-------------------------------------------
Confidence 4799999999999999999999999999988653110
Q ss_pred ecHHHHHHHHHHHHHHC-CCeEE-EEEEEEEEEcCCceEEEEecC-----ceEEECceEEEccCCC
Q 011835 188 VSRHLLHEELLRRCVES-GVSYL-SSKVESITESTSGHRLVACEH-----DMIVPCRLATVASGAA 246 (476)
Q Consensus 188 i~r~~l~~~L~~~~~~~-gv~i~-~~~v~~i~~~~~~~~~v~~~~-----g~~i~a~~vV~A~G~~ 246 (476)
...+.+.+.+. ||+++ +++|++++.++++...|.+.+ +.++.+|.||.|+|..
T Consensus 211 ------~~~~~~~l~~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 270 (338)
T 3itj_A 211 ------STIMQKRAEKNEKIEILYNTVALEAKGDGKLLNALRIKNTKKNEETDLPVSGLFYAIGHT 270 (338)
T ss_dssp ------CHHHHHHHHHCTTEEEECSEEEEEEEESSSSEEEEEEEETTTTEEEEEECSEEEECSCEE
T ss_pred ------CHHHHHHHHhcCCeEEeecceeEEEEcccCcEEEEEEEECCCCceEEEEeCEEEEEeCCC
Confidence 12234445444 99999 999999998776566677765 4689999999999943
No 237
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.24 E-value=3.9e-06 Score=82.31 Aligned_cols=103 Identities=17% Similarity=0.156 Sum_probs=72.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcce
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (476)
..|+|||+|+.|+-+|..|++.|.+|+++++........ ++ .. ..
T Consensus 167 ~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~~~------~d----------------------------~~-~~ 211 (369)
T 3d1c_A 167 GQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDPD------AD----------------------------PS-VR 211 (369)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECC--------------------------------------------CT-TS
T ss_pred CEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCCCC------CC----------------------------CC-cc
Confidence 479999999999999999999999999999865321100 00 00 00
Q ss_pred ecHHHHHHHHHHHHHHCC-CeEE-EEEEEEEEEcCCceEEEEecCceEEE-CceEEEccCCCC
Q 011835 188 VSRHLLHEELLRRCVESG-VSYL-SSKVESITESTSGHRLVACEHDMIVP-CRLATVASGAAS 247 (476)
Q Consensus 188 i~r~~l~~~L~~~~~~~g-v~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~-a~~vV~A~G~~S 247 (476)
+. ..+.+.+.+.+++.| |+++ +++|+.++.+++ .+.|.+.+|+++. +|.||.|+|...
T Consensus 212 ~~-~~~~~~l~~~l~~~g~v~~~~~~~v~~i~~~~~-~~~v~~~~g~~~~~~d~vi~a~G~~~ 272 (369)
T 3d1c_A 212 LS-PYTRQRLGNVIKQGARIEMNVHYTVKDIDFNNG-QYHISFDSGQSVHTPHEPILATGFDA 272 (369)
T ss_dssp CC-HHHHHHHHHHHHTTCCEEEECSCCEEEEEEETT-EEEEEESSSCCEEESSCCEECCCBCG
T ss_pred CC-HHHHHHHHHHHhhCCcEEEecCcEEEEEEecCC-ceEEEecCCeEeccCCceEEeeccCC
Confidence 12 234556666777786 9999 999999986655 5677888887665 699999999543
No 238
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.16 E-value=7e-06 Score=78.89 Aligned_cols=90 Identities=16% Similarity=0.187 Sum_probs=68.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcce
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (476)
..|+|||+|+.|+-+|..|++.|.+|+++++.....
T Consensus 156 ~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~-------------------------------------------- 191 (319)
T 3cty_A 156 KRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYM-------------------------------------------- 191 (319)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCC--------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccC--------------------------------------------
Confidence 479999999999999999999999999998755210
Q ss_pred ecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEec---Cce--EEECceEEEccCCC
Q 011835 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACE---HDM--IVPCRLATVASGAA 246 (476)
Q Consensus 188 i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~---~g~--~i~a~~vV~A~G~~ 246 (476)
.. ..+.+.+.+.||+++ +++++++..+++....|.+. +|+ ++.+|.||.|+|..
T Consensus 192 ~~-----~~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 251 (319)
T 3cty_A 192 CE-----NAYVQEIKKRNIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGEEKLIETDGVFIYVGLI 251 (319)
T ss_dssp SC-----HHHHHHHHHTTCCEECSEEEEEEEESSSSEEEEEEEETTTCCEEEECCSEEEECCCEE
T ss_pred CC-----HHHHHHHhcCCcEEEcCCeEEEEecCCceEEEEEEEEcCCCceEEEecCEEEEeeCCc
Confidence 01 123444557899999 99999998765434456554 563 68999999999943
No 239
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=98.15 E-value=2.2e-05 Score=81.68 Aligned_cols=37 Identities=24% Similarity=0.405 Sum_probs=33.3
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHcC-CcEEEECCCCC
Q 011835 105 NGILDLVVIGCGPAGLALAAESAKLG-LNVGLIGPDLP 141 (476)
Q Consensus 105 ~~~~dVvIIGgG~aGl~~A~~La~~G-~~V~liE~~~~ 141 (476)
...||+||||||.||+++|..|++.| .+|+|||+...
T Consensus 4 ~~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 4 GSHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp TCEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CCcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 35699999999999999999999998 79999998654
No 240
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.15 E-value=5.9e-06 Score=83.63 Aligned_cols=95 Identities=19% Similarity=0.182 Sum_probs=73.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcce
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (476)
.+|+|||||+.|+.+|..|++.|.+|+|+++....... .
T Consensus 149 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-----------------------------------------~ 187 (449)
T 3kd9_A 149 ENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLRR-----------------------------------------S 187 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT-----------------------------------------T
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchh-----------------------------------------h
Confidence 48999999999999999999999999999986632211 0
Q ss_pred ecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCC
Q 011835 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAAS 247 (476)
Q Consensus 188 i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S 247 (476)
.+ ..+.+.+.+.+++. |+++ ++.|+.++.++. ...+ ..++.++.+|.||.|+|...
T Consensus 188 ~~-~~~~~~l~~~l~~~-v~i~~~~~v~~i~~~~~-v~~v-~~~g~~i~~D~Vv~a~G~~p 244 (449)
T 3kd9_A 188 FD-KEVTDILEEKLKKH-VNLRLQEITMKIEGEER-VEKV-VTDAGEYKAELVILATGIKP 244 (449)
T ss_dssp SC-HHHHHHHHHHHTTT-SEEEESCCEEEEECSSS-CCEE-EETTEEEECSEEEECSCEEE
T ss_pred cC-HHHHHHHHHHHHhC-cEEEeCCeEEEEeccCc-EEEE-EeCCCEEECCEEEEeeCCcc
Confidence 12 23556667777777 9999 999999986543 3333 45677899999999999764
No 241
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.15 E-value=6.6e-06 Score=78.64 Aligned_cols=89 Identities=16% Similarity=0.131 Sum_probs=68.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcce
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (476)
.+|+|||+|+.|+-+|..|++.|.+|+++++.+...
T Consensus 145 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-------------------------------------------- 180 (310)
T 1fl2_A 145 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK-------------------------------------------- 180 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSCC--------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcccC--------------------------------------------
Confidence 479999999999999999999999999998865310
Q ss_pred ecHHHHHHHHHHHHHH-CCCeEE-EEEEEEEEEcCCceEEEEecC---c--eEEECceEEEccCC
Q 011835 188 VSRHLLHEELLRRCVE-SGVSYL-SSKVESITESTSGHRLVACEH---D--MIVPCRLATVASGA 245 (476)
Q Consensus 188 i~r~~l~~~L~~~~~~-~gv~i~-~~~v~~i~~~~~~~~~v~~~~---g--~~i~a~~vV~A~G~ 245 (476)
.+ ..+.+.+.+ .||+++ +++++++..++++...|.+.+ | .++.+|.||.|+|.
T Consensus 181 ~~-----~~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 240 (310)
T 1fl2_A 181 AD-----QVLQDKLRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIELAGIFVQIGL 240 (310)
T ss_dssp SC-----HHHHHHHHTCTTEEEESSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred cc-----HHHHHHHhhCCCeEEecCCceEEEEcCCCcEEEEEEEECCCCcEEEEEcCEEEEeeCC
Confidence 01 123444555 699999 999999987655444566643 4 47899999999994
No 242
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.12 E-value=1.1e-05 Score=82.85 Aligned_cols=96 Identities=19% Similarity=0.231 Sum_probs=71.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHc--------------CCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeee
Q 011835 108 LDLVVIGCGPAGLALAAESAKL--------------GLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYI 173 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~--------------G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~ 173 (476)
..++|||||+.|+-+|..|+.. ..+|+|+|..+.....
T Consensus 218 ~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il~~---------------------------- 269 (502)
T 4g6h_A 218 LSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNM---------------------------- 269 (502)
T ss_dssp TEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSSTT----------------------------
T ss_pred cceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccccC----------------------------
Confidence 3699999999999999988754 3679999987643222
Q ss_pred CCCCCEEeccCcceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCc----eEEECceEEEccCCCC
Q 011835 174 DEDEPILIGRAYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHD----MIVPCRLATVASGAAS 247 (476)
Q Consensus 174 ~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g----~~i~a~~vV~A~G~~S 247 (476)
++ ..+.+.+.+.+++.||+++ +++|++++.+.. ...+...|| ++|.+|.||.|+|...
T Consensus 270 --------------~~-~~~~~~~~~~L~~~GV~v~~~~~v~~v~~~~~-~~~~~~~dg~~~~~~i~ad~viwa~Gv~~ 332 (502)
T 4g6h_A 270 --------------FE-KKLSSYAQSHLENTSIKVHLRTAVAKVEEKQL-LAKTKHEDGKITEETIPYGTLIWATGNKA 332 (502)
T ss_dssp --------------SC-HHHHHHHHHHHHHTTCEEETTEEEEEECSSEE-EEEEECTTSCEEEEEEECSEEEECCCEEC
T ss_pred --------------CC-HHHHHHHHHHHHhcceeeecCceEEEEeCCce-EEEEEecCcccceeeeccCEEEEccCCcC
Confidence 22 3366667788889999999 999999865322 334445555 4699999999999544
No 243
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.12 E-value=1.1e-05 Score=77.08 Aligned_cols=90 Identities=19% Similarity=0.168 Sum_probs=68.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcce
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (476)
..|+|||+|+.|+-+|..|++.|.+|+++++.....
T Consensus 144 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-------------------------------------------- 179 (311)
T 2q0l_A 144 KEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFR-------------------------------------------- 179 (311)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCC--------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccC--------------------------------------------
Confidence 579999999999999999999999999998865210
Q ss_pred ecHHHHHHHHHHHHH-HCCCeEE-EEEEEEEEEcCCceEEEEec---Cce--EEECceEEEccCCC
Q 011835 188 VSRHLLHEELLRRCV-ESGVSYL-SSKVESITESTSGHRLVACE---HDM--IVPCRLATVASGAA 246 (476)
Q Consensus 188 i~r~~l~~~L~~~~~-~~gv~i~-~~~v~~i~~~~~~~~~v~~~---~g~--~i~a~~vV~A~G~~ 246 (476)
.+. .+.+.+. +.||+++ +++++++..++++...|.+. +|+ ++.+|.||.|+|..
T Consensus 180 ~~~-----~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 240 (311)
T 2q0l_A 180 CAP-----ITLEHAKNNDKIEFLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVPGFFIFVGYD 240 (311)
T ss_dssp SCH-----HHHHHHHTCTTEEEETTEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECSCEE
T ss_pred CCH-----HHHHHHhhCCCeEEEeCCEEEEEECCCCcEeEEEEEecCCCceEEEecCEEEEEecCc
Confidence 011 1233443 4799999 99999998875534456655 564 78999999999943
No 244
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.09 E-value=2.8e-05 Score=78.89 Aligned_cols=128 Identities=10% Similarity=0.077 Sum_probs=74.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHc--CCcEEEECCCCCCCCCcc--c--------chHHHHhcCcchhhhhhcccceeeeC
Q 011835 107 ILDLVVIGCGPAGLALAAESAKL--GLNVGLIGPDLPFTNNYG--V--------WEDEFRDLGLEGCIEHVWRDTVVYID 174 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~--G~~V~liE~~~~~~~~~G--~--------~~~~l~~~~~~~~~~~~~~~~~~~~~ 174 (476)
..+|+|||||..|+-+|..|++. |.+|+++++...+..... + +.+.+..+... .........
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~p~~~~~~~~~~~~p~~~~~~~~l~~~--~~~~~~~~~---- 300 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALKPADDSPFVNEVFAPKFTDLIYSREHA--ERERLLREY---- 300 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCCBCCCCHHHHGGGSHHHHHHHHHSCHH--HHHHHHHHT----
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCcCccCCccchhccChhHHHHHhcCCHH--HHHHHHHHh----
Confidence 45899999999999999999999 999999998765422100 0 00001111000 000000000
Q ss_pred CCCCEEeccCcceecH----HHHHHHHHHHHHH-CCCeEE-EEEEEEEEEcCCceEEEEec---Cce--EEECceEEEcc
Q 011835 175 EDEPILIGRAYGRVSR----HLLHEELLRRCVE-SGVSYL-SSKVESITESTSGHRLVACE---HDM--IVPCRLATVAS 243 (476)
Q Consensus 175 ~~~~~~~~~~~~~i~r----~~l~~~L~~~~~~-~gv~i~-~~~v~~i~~~~~~~~~v~~~---~g~--~i~a~~vV~A~ 243 (476)
....+..++. ..+...+.+.+.. .||+++ +++|+++..+++ .+.|.+. +|+ ++.+|.||.|+
T Consensus 301 ------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~~~-~~~v~~~~~~~g~~~~~~~D~Vv~At 373 (463)
T 3s5w_A 301 ------HNTNYSVVDTDLIERIYGVFYRQKVSGIPRHAFRCMTTVERATATAQ-GIELALRDAGSGELSVETYDAVILAT 373 (463)
T ss_dssp ------GGGTSSCBCHHHHHHHHHHHHHHHHHCCCCSEEETTEEEEEEEEETT-EEEEEEEETTTCCEEEEEESEEEECC
T ss_pred ------hccCCCcCCHHHHHHHHHHHHHHHhcCCCCeEEEeCCEEEEEEecCC-EEEEEEEEcCCCCeEEEECCEEEEee
Confidence 0000111222 2222333333332 699999 999999998776 5667665 564 58999999999
Q ss_pred CCCC
Q 011835 244 GAAS 247 (476)
Q Consensus 244 G~~S 247 (476)
|...
T Consensus 374 G~~p 377 (463)
T 3s5w_A 374 GYER 377 (463)
T ss_dssp CEEC
T ss_pred CCCC
Confidence 9543
No 245
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.09 E-value=3.6e-06 Score=82.68 Aligned_cols=39 Identities=18% Similarity=0.314 Sum_probs=34.6
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHcCCcEEEECCC-CCCC
Q 011835 105 NGILDLVVIGCGPAGLALAAESAKLGLNVGLIGPD-LPFT 143 (476)
Q Consensus 105 ~~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~-~~~~ 143 (476)
...+||+|||||++||++|+.|++.|++|+|+|+. ...+
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vG 81 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVG 81 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCB
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccC
Confidence 34579999999999999999999999999999998 5433
No 246
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.06 E-value=3.7e-06 Score=83.29 Aligned_cols=38 Identities=26% Similarity=0.341 Sum_probs=34.2
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCC
Q 011835 105 NGILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPF 142 (476)
Q Consensus 105 ~~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~ 142 (476)
...+||+|||||++||++|+.|++.|++|+|+|+....
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~ 64 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHI 64 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCC
Confidence 35689999999999999999999999999999986543
No 247
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.04 E-value=3.8e-05 Score=80.70 Aligned_cols=96 Identities=19% Similarity=0.171 Sum_probs=69.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcce
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (476)
-+|+|||||..|+-+|..|++.|.+|+|+++. .....
T Consensus 287 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~-~~l~~------------------------------------------ 323 (598)
T 2x8g_A 287 GKTLVIGASYVALECAGFLASLGGDVTVMVRS-ILLRG------------------------------------------ 323 (598)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CSSTT------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEECC-cCcCc------------------------------------------
Confidence 37999999999999999999999999999875 21111
Q ss_pred ecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEc------C--CceEEEE--ecCceEEE--CceEEEccCCCC
Q 011835 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITES------T--SGHRLVA--CEHDMIVP--CRLATVASGAAS 247 (476)
Q Consensus 188 i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~------~--~~~~~v~--~~~g~~i~--a~~vV~A~G~~S 247 (476)
++. .+.+.+.+.+++.||+++ ++.++.+... + ++.+.+. ..+|+++. +|.||.|+|...
T Consensus 324 ~d~-~~~~~~~~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a~G~~p 395 (598)
T 2x8g_A 324 FDQ-QMAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGREP 395 (598)
T ss_dssp SCH-HHHHHHHHHHHHTTCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSCEEEEEESEEEECSCEEE
T ss_pred CCH-HHHHHHHHHHHhCCCEEEECCeEEEEEeccccccccCCCceEEEEEEeCCCcEEeccCCEEEEEeCCcc
Confidence 122 244455667788899999 8888887642 2 1233333 45675554 999999999655
No 248
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.04 E-value=1.1e-05 Score=77.05 Aligned_cols=90 Identities=16% Similarity=0.120 Sum_probs=69.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcce
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (476)
..|+|||+|+.|+-+|..|++.|.+|+++++.....
T Consensus 148 ~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~~-------------------------------------------- 183 (315)
T 3r9u_A 148 KEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFR-------------------------------------------- 183 (315)
T ss_dssp SEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSCB--------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCCC--------------------------------------------
Confidence 479999999999999999999999999998865320
Q ss_pred ecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEec--Cce--EEECceEEEccCC
Q 011835 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACE--HDM--IVPCRLATVASGA 245 (476)
Q Consensus 188 i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~--~g~--~i~a~~vV~A~G~ 245 (476)
.... .+.+.+++.||+++ +++++++..++++...|.+. +|+ ++.+|.||.|+|.
T Consensus 184 ~~~~----~~~~~~~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~g~~~~~~~D~vv~a~G~ 242 (315)
T 3r9u_A 184 AAPS----TVEKVKKNEKIELITSASVDEVYGDKMGVAGVKVKLKDGSIRDLNVPGIFTFVGL 242 (315)
T ss_dssp SCHH----HHHHHHHCTTEEEECSCEEEEEEEETTEEEEEEEECTTSCEEEECCSCEEECSCE
T ss_pred CCHH----HHHHHHhcCCeEEEeCcEEEEEEcCCCcEEEEEEEcCCCCeEEeecCeEEEEEcC
Confidence 0111 11222357899999 99999998877545556555 774 7899999999994
No 249
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.04 E-value=1.6e-05 Score=80.81 Aligned_cols=95 Identities=18% Similarity=0.155 Sum_probs=71.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcce
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (476)
..|+|||||+.|+-+|..|++.|.+|+++++........
T Consensus 173 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~----------------------------------------- 211 (466)
T 3l8k_A 173 QDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALITL----------------------------------------- 211 (466)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTS-----------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCCCC-----------------------------------------
Confidence 579999999999999999999999999999866322110
Q ss_pred ecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcC-CceEEEEec--Cce--EEECceEEEccCCCCC
Q 011835 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITEST-SGHRLVACE--HDM--IVPCRLATVASGAASG 248 (476)
Q Consensus 188 i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~-~~~~~v~~~--~g~--~i~a~~vV~A~G~~S~ 248 (476)
++. .+.+.+.+.++ |+++ +++|++++.++ + .+.|.+. +|+ ++.+|.||.|+|..+.
T Consensus 212 ~d~-~~~~~l~~~l~---v~i~~~~~v~~i~~~~~~-~v~v~~~~~~G~~~~i~~D~vi~a~G~~p~ 273 (466)
T 3l8k_A 212 EDQ-DIVNTLLSILK---LNIKFNSPVTEVKKIKDD-EYEVIYSTKDGSKKSIFTNSVVLAAGRRPV 273 (466)
T ss_dssp CCH-HHHHHHHHHHC---CCEECSCCEEEEEEEETT-EEEEEECCTTSCCEEEEESCEEECCCEEEC
T ss_pred CCH-HHHHHHHhcCE---EEEEECCEEEEEEEcCCC-cEEEEEEecCCceEEEEcCEEEECcCCCcc
Confidence 011 23333334333 9999 99999998876 5 5667776 564 8999999999997653
No 250
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.04 E-value=4.3e-06 Score=83.89 Aligned_cols=36 Identities=25% Similarity=0.344 Sum_probs=32.8
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcC-CcEEEECCCCC
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLG-LNVGLIGPDLP 141 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G-~~V~liE~~~~ 141 (476)
..+||+|||||++||++|+.|++.| ++|+|+|+...
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~ 41 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDH 41 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCC
Confidence 4579999999999999999999999 99999998654
No 251
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.03 E-value=4.4e-05 Score=78.67 Aligned_cols=96 Identities=15% Similarity=0.202 Sum_probs=70.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcce
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (476)
-.|+|||||+.|+-+|..|++.|.+|+|+++.. ....
T Consensus 211 ~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~~-~l~~------------------------------------------ 247 (519)
T 3qfa_A 211 GKTLVVGASYVALECAGFLAGIGLDVTVMVRSI-LLRG------------------------------------------ 247 (519)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-SSTT------------------------------------------
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEeccc-cccc------------------------------------------
Confidence 369999999999999999999999999998742 1111
Q ss_pred ecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCC---ceEEEE--ecCc---eEEECceEEEccCCCC
Q 011835 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTS---GHRLVA--CEHD---MIVPCRLATVASGAAS 247 (476)
Q Consensus 188 i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~---~~~~v~--~~~g---~~i~a~~vV~A~G~~S 247 (476)
.+ ..+.+.+.+.+++.||+++ +++++.+...++ +.+.+. ..++ .++.+|.||.|+|...
T Consensus 248 ~d-~~~~~~~~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~~p 315 (519)
T 3qfa_A 248 FD-QDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDA 315 (519)
T ss_dssp SC-HHHHHHHHHHHHHTTCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSCEEE
T ss_pred CC-HHHHHHHHHHHHHCCCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecCCcc
Confidence 22 2355666777888999999 888888765432 234443 3454 3578999999999654
No 252
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.03 E-value=2e-05 Score=75.38 Aligned_cols=90 Identities=19% Similarity=0.165 Sum_probs=68.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcce
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (476)
.+|+|||+|+.|+-+|..|++.|.+|+++++......
T Consensus 155 ~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~~------------------------------------------- 191 (323)
T 3f8d_A 155 RVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKA------------------------------------------- 191 (323)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCCS-------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCCc-------------------------------------------
Confidence 5799999999999999999999999999988653110
Q ss_pred ecHHHHHHHHHHHHH-HCCCeEE-EEEEEEEEEcCCceEEEEecC---ce--EEECceEEEccCCCC
Q 011835 188 VSRHLLHEELLRRCV-ESGVSYL-SSKVESITESTSGHRLVACEH---DM--IVPCRLATVASGAAS 247 (476)
Q Consensus 188 i~r~~l~~~L~~~~~-~~gv~i~-~~~v~~i~~~~~~~~~v~~~~---g~--~i~a~~vV~A~G~~S 247 (476)
+. .+.+.+. +.||+++ +++++.+..+++ ...|.+.+ |+ ++.+|.||.|+|...
T Consensus 192 -~~-----~~~~~~~~~~gv~~~~~~~v~~i~~~~~-~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p 251 (323)
T 3f8d_A 192 -QP-----IYVETVKKKPNVEFVLNSVVKEIKGDKV-VKQVVVENLKTGEIKELNVNGVFIEIGFDP 251 (323)
T ss_dssp -CH-----HHHHHHHTCTTEEEECSEEEEEEEESSS-EEEEEEEETTTCCEEEEECSEEEECCCEEC
T ss_pred -CH-----HHHHHHHhCCCcEEEeCCEEEEEeccCc-eeEEEEEECCCCceEEEEcCEEEEEECCCC
Confidence 11 1233343 4599999 999999988744 56677665 64 789999999999543
No 253
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=98.02 E-value=3.4e-06 Score=87.02 Aligned_cols=37 Identities=22% Similarity=0.291 Sum_probs=33.5
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcC-CcEEEECCCCCC
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLG-LNVGLIGPDLPF 142 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G-~~V~liE~~~~~ 142 (476)
..+||+|||||++||+||+.|++.| ++|+|+|+....
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~ri 44 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRV 44 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCC
Confidence 4579999999999999999999999 999999986643
No 254
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.02 E-value=2.1e-05 Score=75.74 Aligned_cols=88 Identities=18% Similarity=0.163 Sum_probs=66.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcce
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (476)
.+|+|||+|+.|+-+|..|++.|.+|+++++.....
T Consensus 153 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-------------------------------------------- 188 (325)
T 2q7v_A 153 KKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLR-------------------------------------------- 188 (325)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCC--------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCC--------------------------------------------
Confidence 479999999999999999999999999998865210
Q ss_pred ecHHHHHHHHHHHHH-HCCCeEE-EEEEEEEEEcCCceEEEEec---Cce--EEECceEEEccCC
Q 011835 188 VSRHLLHEELLRRCV-ESGVSYL-SSKVESITESTSGHRLVACE---HDM--IVPCRLATVASGA 245 (476)
Q Consensus 188 i~r~~l~~~L~~~~~-~~gv~i~-~~~v~~i~~~~~~~~~v~~~---~g~--~i~a~~vV~A~G~ 245 (476)
... .+.+.+. +.||+++ +++++.+..++. ...|.+. +|+ ++.+|.||.|+|.
T Consensus 189 ~~~-----~~~~~l~~~~gv~i~~~~~v~~i~~~~~-v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 247 (325)
T 2q7v_A 189 ANK-----VAQARAFANPKMKFIWDTAVEEIQGADS-VSGVKLRNLKTGEVSELATDGVFIFIGH 247 (325)
T ss_dssp SCH-----HHHHHHHTCTTEEEECSEEEEEEEESSS-EEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred cch-----HHHHHHHhcCCceEecCCceEEEccCCc-EEEEEEEECCCCcEEEEEcCEEEEccCC
Confidence 011 1233343 3699999 999999987533 4466664 563 7899999999994
No 255
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.01 E-value=2.3e-06 Score=84.86 Aligned_cols=84 Identities=15% Similarity=0.069 Sum_probs=66.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcce
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (476)
.+|+|||||+.|+.+|..|++.|.+|+|+|+.+..... .
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~-----------------------------------------~ 185 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLER-----------------------------------------Q 185 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTT-----------------------------------------T
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchh-----------------------------------------h
Confidence 47999999999999999999999999999987642211 0
Q ss_pred ecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCC
Q 011835 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAAS 247 (476)
Q Consensus 188 i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S 247 (476)
++ ..+.+.+.+.+++.||+++ +++++.+ |+++.+|.||.|+|...
T Consensus 186 ~~-~~~~~~~~~~l~~~gV~~~~~~~v~~i--------------g~~~~~D~vv~a~G~~p 231 (385)
T 3klj_A 186 LD-RDGGLFLKDKLDRLGIKIYTNSNFEEM--------------GDLIRSSCVITAVGVKP 231 (385)
T ss_dssp SC-HHHHHHHHHHHHTTTCEEECSCCGGGC--------------HHHHHHSEEEECCCEEE
T ss_pred cC-HHHHHHHHHHHHhCCCEEEeCCEEEEc--------------CeEEecCeEEECcCccc
Confidence 22 2355566777888999999 8877654 45688999999999665
No 256
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=98.01 E-value=5.4e-06 Score=84.85 Aligned_cols=36 Identities=39% Similarity=0.553 Sum_probs=33.1
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCC
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLP 141 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~ 141 (476)
..+||+|||||++||++|+.|++.|++|+|+|+...
T Consensus 10 ~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~ 45 (489)
T 2jae_A 10 GSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTR 45 (489)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCC
Confidence 457999999999999999999999999999998654
No 257
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.00 E-value=5e-06 Score=82.80 Aligned_cols=36 Identities=28% Similarity=0.333 Sum_probs=32.9
Q ss_pred CcccEEEECCCHHHHHHHHHHHHc-CCcEEEECCCCC
Q 011835 106 GILDLVVIGCGPAGLALAAESAKL-GLNVGLIGPDLP 141 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~-G~~V~liE~~~~ 141 (476)
..+||+|||||++||++|+.|++. |++|+|+|+...
T Consensus 6 ~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~ 42 (399)
T 1v0j_A 6 ARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPH 42 (399)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSS
T ss_pred ccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 358999999999999999999999 999999998653
No 258
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=97.96 E-value=8.5e-06 Score=77.14 Aligned_cols=84 Identities=11% Similarity=0.067 Sum_probs=67.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcce
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (476)
..|+|||+|+.|+.+|..|++.| +|+++++... .
T Consensus 142 ~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~---------------------------------------------~ 175 (297)
T 3fbs_A 142 GKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIV---------------------------------------------E 175 (297)
T ss_dssp CEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTC---------------------------------------------C
T ss_pred CEEEEEecCccHHHHHHHhhhcC-cEEEEECCCC---------------------------------------------C
Confidence 57999999999999999999999 9999987542 0
Q ss_pred ecHHHHHHHHHHHHHHCCCeEEEEEEEEEEEcCCceEEEEecCceEEECceEEEccCCC
Q 011835 188 VSRHLLHEELLRRCVESGVSYLSSKVESITESTSGHRLVACEHDMIVPCRLATVASGAA 246 (476)
Q Consensus 188 i~r~~l~~~L~~~~~~~gv~i~~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~ 246 (476)
+.. .+.+.+.+.||+++.++|+++..++ .|.+.+|+++.+|.||.|+|..
T Consensus 176 ~~~-----~~~~~l~~~gv~i~~~~v~~i~~~~----~v~~~~g~~~~~D~vi~a~G~~ 225 (297)
T 3fbs_A 176 PDA-----DQHALLAARGVRVETTRIREIAGHA----DVVLADGRSIALAGLFTQPKLR 225 (297)
T ss_dssp CCH-----HHHHHHHHTTCEEECSCEEEEETTE----EEEETTSCEEEESEEEECCEEE
T ss_pred CCH-----HHHHHHHHCCcEEEcceeeeeecCC----eEEeCCCCEEEEEEEEEccCcc
Confidence 121 2345667789999977888876432 6778899899999999999944
No 259
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.96 E-value=8e-06 Score=87.31 Aligned_cols=93 Identities=17% Similarity=0.214 Sum_probs=68.6
Q ss_pred ccEEEEC--CCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCc
Q 011835 108 LDLVVIG--CGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAY 185 (476)
Q Consensus 108 ~dVvIIG--gG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (476)
.+|+||| +|..|+.+|..|++.|.+|+++++.......
T Consensus 524 ~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~---------------------------------------- 563 (690)
T 3k30_A 524 KKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSW---------------------------------------- 563 (690)
T ss_dssp SEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGG----------------------------------------
T ss_pred CEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccccccc----------------------------------------
Confidence 4699999 9999999999999999999999876532111
Q ss_pred ceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEe---cCceEEECceEEEccCC
Q 011835 186 GRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVAC---EHDMIVPCRLATVASGA 245 (476)
Q Consensus 186 ~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~---~~g~~i~a~~vV~A~G~ 245 (476)
.....+...+.+.+++.||+++ +++|++++.+ .+.+.. .+++++.+|.||+|+|.
T Consensus 564 --~~~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~---~~~v~~~~~~~~~~i~aD~VV~A~G~ 622 (690)
T 3k30_A 564 --TNNTFEVNRIQRRLIENGVARVTDHAVVAVGAG---GVTVRDTYASIERELECDAVVMVTAR 622 (690)
T ss_dssp --GGGGTCHHHHHHHHHHTTCEEEESEEEEEEETT---EEEEEETTTCCEEEEECSEEEEESCE
T ss_pred --cccchhHHHHHHHHHHCCCEEEcCcEEEEEECC---eEEEEEccCCeEEEEECCEEEECCCC
Confidence 0001123455666778999999 9999999753 233332 24568999999999993
No 260
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.95 E-value=3.6e-05 Score=74.23 Aligned_cols=90 Identities=19% Similarity=0.116 Sum_probs=67.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcce
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (476)
.+|+|||+|..|+-+|..|++.|.+|+++++.....
T Consensus 160 ~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~-------------------------------------------- 195 (333)
T 1vdc_A 160 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFR-------------------------------------------- 195 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCC--------------------------------------------
T ss_pred CeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCC--------------------------------------------
Confidence 479999999999999999999999999999865310
Q ss_pred ecHHHHHHHHH-HHHHHCCCeEE-EEEEEEEEEcCC--ceEEEEec---Cc--eEEECceEEEccCCC
Q 011835 188 VSRHLLHEELL-RRCVESGVSYL-SSKVESITESTS--GHRLVACE---HD--MIVPCRLATVASGAA 246 (476)
Q Consensus 188 i~r~~l~~~L~-~~~~~~gv~i~-~~~v~~i~~~~~--~~~~v~~~---~g--~~i~a~~vV~A~G~~ 246 (476)
... .+. +.+++.||+++ +++++++..+++ +...|.+. +| .++.+|.||.|+|..
T Consensus 196 ~~~-----~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 258 (333)
T 1vdc_A 196 ASK-----IMQQRALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGHE 258 (333)
T ss_dssp SCH-----HHHHHHHTCTTEEEECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEECSEEEECSCEE
T ss_pred ccH-----HHHHHHHhCCCeeEecCCceEEEeCCCCccceeeEEEEecCCCceEEEecCEEEEEeCCc
Confidence 011 122 22356899999 999999988764 34445554 34 578999999999943
No 261
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.92 E-value=6.8e-06 Score=80.88 Aligned_cols=34 Identities=29% Similarity=0.346 Sum_probs=31.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLP 141 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~ 141 (476)
+||+|||||++||++|+.|++.|++|+|+|+...
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~ 35 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNH 35 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCC
Confidence 6999999999999999999999999999998653
No 262
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.90 E-value=4.5e-05 Score=73.33 Aligned_cols=89 Identities=15% Similarity=0.114 Sum_probs=69.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcce
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (476)
..|+|||+|+.|+-+|..|++.|.+|+++++...+..
T Consensus 155 ~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~~------------------------------------------- 191 (332)
T 3lzw_A 155 RRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRA------------------------------------------- 191 (332)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCSS-------------------------------------------
T ss_pred CEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCCc-------------------------------------------
Confidence 5799999999999999999999999999988653210
Q ss_pred ecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecC-----ceEEECceEEEccCCC
Q 011835 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEH-----DMIVPCRLATVASGAA 246 (476)
Q Consensus 188 i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~-----g~~i~a~~vV~A~G~~ 246 (476)
... ..+.+++.||+++ +++++.+..+++ ...|.+.+ +.++.+|.||.|+|..
T Consensus 192 ~~~------~~~~l~~~gv~~~~~~~v~~i~~~~~-~~~v~~~~~~~g~~~~~~~D~vv~a~G~~ 249 (332)
T 3lzw_A 192 HEH------SVENLHASKVNVLTPFVPAELIGEDK-IEQLVLEEVKGDRKEILEIDDLIVNYGFV 249 (332)
T ss_dssp CHH------HHHHHHHSSCEEETTEEEEEEECSSS-CCEEEEEETTSCCEEEEECSEEEECCCEE
T ss_pred cHH------HHHHHhcCCeEEEeCceeeEEecCCc-eEEEEEEecCCCceEEEECCEEEEeeccC
Confidence 000 1233567899999 999999988665 55666655 4679999999999944
No 263
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.85 E-value=1.2e-05 Score=82.56 Aligned_cols=37 Identities=32% Similarity=0.354 Sum_probs=33.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCC
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFT 143 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~ 143 (476)
.+||+|||||++||++|+.|++.|++|+|+|+....+
T Consensus 13 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~G 49 (504)
T 1sez_A 13 AKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAG 49 (504)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCC
Confidence 4799999999999999999999999999999876543
No 264
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.83 E-value=1.6e-05 Score=81.57 Aligned_cols=36 Identities=28% Similarity=0.340 Sum_probs=32.9
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCC
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLP 141 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~ 141 (476)
..+||+|||||++||++|+.|++.|++|+|+|+...
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~ 67 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASER 67 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCC
Confidence 357999999999999999999999999999998654
No 265
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.82 E-value=5.5e-05 Score=77.98 Aligned_cols=89 Identities=17% Similarity=0.145 Sum_probs=68.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcce
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (476)
.+|+|||||..|+-+|..|++.|.+|+++++.....
T Consensus 356 k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~-------------------------------------------- 391 (521)
T 1hyu_A 356 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK-------------------------------------------- 391 (521)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCC--------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccC--------------------------------------------
Confidence 479999999999999999999999999998765210
Q ss_pred ecHHHHHHHHHHHHHH-CCCeEE-EEEEEEEEEcCCceEEEEecC---c--eEEECceEEEccCC
Q 011835 188 VSRHLLHEELLRRCVE-SGVSYL-SSKVESITESTSGHRLVACEH---D--MIVPCRLATVASGA 245 (476)
Q Consensus 188 i~r~~l~~~L~~~~~~-~gv~i~-~~~v~~i~~~~~~~~~v~~~~---g--~~i~a~~vV~A~G~ 245 (476)
.+ ..+.+.+.+ .||+++ +++++.+..+++++..|.+.+ | .++.+|.||.|+|.
T Consensus 392 ~~-----~~l~~~l~~~~gV~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 451 (521)
T 1hyu_A 392 AD-----QVLQDKVRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHSVALAGIFVQIGL 451 (521)
T ss_dssp SC-----HHHHHHHTTCTTEEEECSEEEEEEEECSSSEEEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred cC-----HHHHHHHhcCCCcEEEeCCEEEEEEcCCCcEEEEEEEeCCCCceEEEEcCEEEECcCC
Confidence 01 123445555 599999 999999987655455666653 4 36899999999993
No 266
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.81 E-value=4.1e-05 Score=74.07 Aligned_cols=89 Identities=20% Similarity=0.259 Sum_probs=65.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcce
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (476)
..|+|||+|+.|+-+|..|++.|.+|+++++......
T Consensus 156 ~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~~------------------------------------------- 192 (335)
T 2a87_A 156 QDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFRA------------------------------------------- 192 (335)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCSS-------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCCc-------------------------------------------
Confidence 5799999999999999999999999999988653210
Q ss_pred ecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEec---Cc--eEEECceEEEccCC
Q 011835 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACE---HD--MIVPCRLATVASGA 245 (476)
Q Consensus 188 i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~---~g--~~i~a~~vV~A~G~ 245 (476)
.+ .+. .+.+++.||+++ ++++++++.+++ ...|.+. +| .++.+|.||.|+|.
T Consensus 193 -~~-~~~---~~~~~~~gV~v~~~~~v~~i~~~~~-~~~v~~~~~~~g~~~~i~~D~vi~a~G~ 250 (335)
T 2a87_A 193 -SK-IML---DRARNNDKIRFLTNHTVVAVDGDTT-VTGLRVRDTNTGAETTLPVTGVFVAIGH 250 (335)
T ss_dssp -CT-THH---HHHHHCTTEEEECSEEEEEEECSSS-CCEEEEEEETTSCCEEECCSCEEECSCE
T ss_pred -cH-HHH---HHHhccCCcEEEeCceeEEEecCCc-EeEEEEEEcCCCceEEeecCEEEEccCC
Confidence 00 011 122346899999 999999987653 3344443 34 57899999999994
No 267
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.79 E-value=1.8e-05 Score=80.87 Aligned_cols=37 Identities=32% Similarity=0.389 Sum_probs=33.2
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcC-CcEEEECCCCCC
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLG-LNVGLIGPDLPF 142 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G-~~V~liE~~~~~ 142 (476)
..+||+|||||++||++|+.|++.| .+|+|+|+....
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~ 45 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTP 45 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSS
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCC
Confidence 4579999999999999999999999 799999987543
No 268
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.78 E-value=1.6e-05 Score=78.67 Aligned_cols=35 Identities=20% Similarity=0.375 Sum_probs=32.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPF 142 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~ 142 (476)
+||+|||||++|+++|+.|++.|++|+|+|+....
T Consensus 4 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~ 38 (384)
T 2bi7_A 4 KKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHI 38 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCc
Confidence 69999999999999999999999999999986543
No 269
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=97.76 E-value=1.9e-05 Score=83.15 Aligned_cols=38 Identities=26% Similarity=0.358 Sum_probs=33.9
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCC
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFT 143 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~ 143 (476)
..+||+|||||++|+++|+.|++.|++|+|||+.....
T Consensus 45 ~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~g 82 (623)
T 3pl8_A 45 IKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDS 82 (623)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCS
T ss_pred ccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCC
Confidence 45899999999999999999999999999999876443
No 270
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.74 E-value=6.7e-05 Score=83.04 Aligned_cols=88 Identities=18% Similarity=0.179 Sum_probs=69.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcce
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (476)
..|+|||+|+.|+-+|..|++.|.+|+|+|+....
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~--------------------------------------------- 319 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAATGGVVAVIDARSSI--------------------------------------------- 319 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSC---------------------------------------------
T ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCcc---------------------------------------------
Confidence 47999999999999999999999999999886521
Q ss_pred ecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEc-CCceEEEEecC-------c--eEEECceEEEccCCCC
Q 011835 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITES-TSGHRLVACEH-------D--MIVPCRLATVASGAAS 247 (476)
Q Consensus 188 i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~-~~~~~~v~~~~-------g--~~i~a~~vV~A~G~~S 247 (476)
... .+.+++.||+++ ++.++.+..+ ++++..|.+.+ | +++.+|.||.|+|...
T Consensus 320 -~~~------~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~~P 383 (965)
T 2gag_A 320 -SAA------AAQAVADGVQVISGSVVVDTEADENGELSAIVVAELDEARELGGTQRFEADVLAVAGGFNP 383 (965)
T ss_dssp -CHH------HHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEEEECTTCCEEEEEEEECSEEEEECCEEE
T ss_pred -chh------HHHHHhCCeEEEeCCEeEEEeccCCCCEEEEEEEeccccCCCCceEEEEcCEEEECCCcCc
Confidence 111 345677899999 9999999874 34344566554 4 6799999999999654
No 271
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.67 E-value=3.1e-05 Score=80.45 Aligned_cols=36 Identities=25% Similarity=0.425 Sum_probs=32.9
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 105 NGILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 105 ~~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
+..+|+||||+|++|+++|..|++.|++|+|||+..
T Consensus 5 ~~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~ 40 (546)
T 1kdg_A 5 ATPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGG 40 (546)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CCceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 356899999999999999999999999999999865
No 272
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.65 E-value=7.1e-05 Score=77.41 Aligned_cols=35 Identities=17% Similarity=0.079 Sum_probs=32.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCC
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLP 141 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~ 141 (476)
..+|+|||+|..|+-+|..|++.|.+|+|+++.+.
T Consensus 178 ~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 178 GRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred cceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 35899999999999999999999999999998765
No 273
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.62 E-value=0.0004 Score=70.28 Aligned_cols=129 Identities=22% Similarity=0.237 Sum_probs=75.2
Q ss_pred ccEEEECCCHHHHHHHHHHH--------------------HcCC-cEEEECCCCCCCCCcccchHHHHhcC-cchhhhhh
Q 011835 108 LDLVVIGCGPAGLALAAESA--------------------KLGL-NVGLIGPDLPFTNNYGVWEDEFRDLG-LEGCIEHV 165 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La--------------------~~G~-~V~liE~~~~~~~~~G~~~~~l~~~~-~~~~~~~~ 165 (476)
..|+|||+|..|+-+|..|+ +.|. +|+|+++..+....+. ..++..+. +..
T Consensus 146 ~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~~~~~ft--~~el~~l~~lp~----- 218 (460)
T 1cjc_A 146 DTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGPLQVAFT--IKELREMIQLPG----- 218 (460)
T ss_dssp SEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCGGGCCCC--HHHHHHHHTCTT-----
T ss_pred CEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCChHhhccC--HHHHHHhhcCCC-----
Confidence 57999999999999999999 6788 6999998775443332 22333220 000
Q ss_pred cccceeeeCCCCC--E-EeccCcceecHHHHHHHHHHHHHH--------------CCCeEE-EEEEEEEEEcC-C-ceEE
Q 011835 166 WRDTVVYIDEDEP--I-LIGRAYGRVSRHLLHEELLRRCVE--------------SGVSYL-SSKVESITEST-S-GHRL 225 (476)
Q Consensus 166 ~~~~~~~~~~~~~--~-~~~~~~~~i~r~~l~~~L~~~~~~--------------~gv~i~-~~~v~~i~~~~-~-~~~~ 225 (476)
.......... . ..-..... .+..+.+.|.+.+.+ .||+++ ++.++.+..++ + .+..
T Consensus 219 ---~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~~v~~ 294 (460)
T 1cjc_A 219 ---TRPMLDPADFLGLQDRIKEAAR-PRKRLMELLLRTATEKPGVEEAARRASASRAWGLRFFRSPQQVLPSPDGRRAAG 294 (460)
T ss_dssp ---EEEECCGGGGTTHHHHTTTSCH-HHHHHHHHHHHHHHSCCCHHHHHHHHTCSEEEEEECSEEEEEEEECTTSSSEEE
T ss_pred ---ceeEechhhhcchhhhhhhccH-HHHHHHHHHHHHHHhccccccccCCCCCCceEEEECCCChheEEcCCCCceEEE
Confidence 0000000000 0 00000001 122345555555555 789999 99999988763 2 2434
Q ss_pred EEec---------------Cc--eEEECceEEEccCCCC
Q 011835 226 VACE---------------HD--MIVPCRLATVASGAAS 247 (476)
Q Consensus 226 v~~~---------------~g--~~i~a~~vV~A~G~~S 247 (476)
|.+. +| +++.+|.||.|.|..+
T Consensus 295 v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~p 333 (460)
T 1cjc_A 295 IRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGYKS 333 (460)
T ss_dssp EEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCEEC
T ss_pred EEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCCCC
Confidence 4432 34 5789999999999665
No 274
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.60 E-value=5.3e-05 Score=77.05 Aligned_cols=42 Identities=14% Similarity=0.105 Sum_probs=36.5
Q ss_pred CCeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCC
Q 011835 205 GVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAAS 247 (476)
Q Consensus 205 gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S 247 (476)
|++|+ +++|++|..+++ .+.|++.+|++++||.||.|++...
T Consensus 228 ~~~i~~~~~V~~i~~~~~-~v~v~~~~g~~~~ad~vI~a~~~~~ 270 (472)
T 1b37_A 228 DPRLQLNKVVREIKYSPG-GVTVKTEDNSVYSADYVMVSASLGV 270 (472)
T ss_dssp CTTEESSCCEEEEEECSS-CEEEEETTSCEEEESEEEECSCHHH
T ss_pred ccEEEcCCEEEEEEEcCC-cEEEEECCCCEEEcCEEEEecCHHH
Confidence 67899 999999998877 4668889998899999999999654
No 275
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=97.53 E-value=0.0002 Score=68.19 Aligned_cols=90 Identities=19% Similarity=0.139 Sum_probs=62.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcce
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (476)
.+|+|||||..|+-+|..|++.|.+|+|+++.....
T Consensus 153 ~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~~~-------------------------------------------- 188 (314)
T 4a5l_A 153 KVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAFR-------------------------------------------- 188 (314)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCC--------------------------------------------
T ss_pred CeEEEECCChHHHHHHHHHHHhCCeeeeeccccccc--------------------------------------------
Confidence 479999999999999999999999999998754211
Q ss_pred ecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEe-----cCceEEECceEEEccCC
Q 011835 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVAC-----EHDMIVPCRLATVASGA 245 (476)
Q Consensus 188 i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~-----~~g~~i~a~~vV~A~G~ 245 (476)
.... ...+.....++..+ .+.+..+...++....+.+ .+++++.+|.||.|.|.
T Consensus 189 ~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~d~vi~a~G~ 248 (314)
T 4a5l_A 189 ASKT----MQERVLNHPKIEVIWNSELVELEGDGDLLNGAKIHNLVSGEYKVVPVAGLFYAIGH 248 (314)
T ss_dssp SCHH----HHHHHHTCTTEEEECSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred ccch----hhhhhhcccceeeEeeeeeEEEEeeeeccceeEEeecccccceeeccccceEeccc
Confidence 1111 11222344567777 7777777765543333332 23578999999999994
No 276
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.52 E-value=0.00055 Score=76.28 Aligned_cols=92 Identities=16% Similarity=0.159 Sum_probs=65.7
Q ss_pred cEEEECCCHHHHHHHHHHHHcCC-cEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcce
Q 011835 109 DLVVIGCGPAGLALAAESAKLGL-NVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (476)
Q Consensus 109 dVvIIGgG~aGl~~A~~La~~G~-~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (476)
+|+|||||..|+-+|..|++.|. +|+|+++..... +. .
T Consensus 334 ~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~~~~---------~~--------------------------------~ 372 (1025)
T 1gte_A 334 AVIVLGAGDTAFDCATSALRCGARRVFLVFRKGFVN---------IR--------------------------------A 372 (1025)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCGGG---------CC--------------------------------S
T ss_pred cEEEECCChHHHHHHHHHHHcCCCEEEEEEecChhh---------CC--------------------------------C
Confidence 89999999999999999999997 899998865100 00 0
Q ss_pred ecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEec------C-------c--eEEECceEEEccCCCC
Q 011835 188 VSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACE------H-------D--MIVPCRLATVASGAAS 247 (476)
Q Consensus 188 i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~------~-------g--~~i~a~~vV~A~G~~S 247 (476)
.+. . .+.+++.||+++ ++.++.+..+++.+..|.+. + | .++.+|.||+|.|...
T Consensus 373 ~~~-e-----~~~~~~~Gv~~~~~~~~~~i~~~~g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~~~ 442 (1025)
T 1gte_A 373 VPE-E-----VELAKEEKCEFLPFLSPRKVIVKGGRIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGSVL 442 (1025)
T ss_dssp CHH-H-----HHHHHHTTCEEECSEEEEEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSCEEC
T ss_pred CHH-H-----HHHHHHcCCEEEeCCCceEEEccCCeEEEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCCCCC
Confidence 111 1 134567899999 88988887654434444432 1 2 4789999999999743
No 277
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=97.51 E-value=5e-05 Score=78.40 Aligned_cols=35 Identities=34% Similarity=0.360 Sum_probs=31.4
Q ss_pred CcccEEEECCCHHHHHHHHHHHH-cCCcEEEECCCC
Q 011835 106 GILDLVVIGCGPAGLALAAESAK-LGLNVGLIGPDL 140 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~-~G~~V~liE~~~ 140 (476)
.+||+||||+|+||+.+|..|++ .|++|+|||+..
T Consensus 16 ~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~ 51 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGE 51 (526)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSB
T ss_pred CCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCC
Confidence 46999999999999999999998 689999999753
No 278
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.49 E-value=0.00037 Score=70.49 Aligned_cols=130 Identities=18% Similarity=0.159 Sum_probs=74.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHc--------------------CC-cEEEECCCCCCCCCcccchHHHHhcCcchhhhhhc
Q 011835 108 LDLVVIGCGPAGLALAAESAKL--------------------GL-NVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVW 166 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~--------------------G~-~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~ 166 (476)
-.|+|||+|..|+-+|..|++. |. +|+|+++..+....+. ..++.++.-.+
T Consensus 148 ~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~~~~f~--~~elrel~~lp------ 219 (456)
T 1lqt_A 148 ARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPLQAAFT--TLELRELADLD------ 219 (456)
T ss_dssp SEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGGGCCCC--HHHHHHGGGCT------
T ss_pred CEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChhhhccC--hHHHHHhhcCC------
Confidence 5799999999999999999974 65 8999998776544432 22232221000
Q ss_pred ccceeeeCCCCCE-EeccCcceec--HHHHHHHHHHHHHH------CCCeEE-EEEEEEEEEcCCceEEEEec-------
Q 011835 167 RDTVVYIDEDEPI-LIGRAYGRVS--RHLLHEELLRRCVE------SGVSYL-SSKVESITESTSGHRLVACE------- 229 (476)
Q Consensus 167 ~~~~~~~~~~~~~-~~~~~~~~i~--r~~l~~~L~~~~~~------~gv~i~-~~~v~~i~~~~~~~~~v~~~------- 229 (476)
...+........ .........+ +..+.+.|.+.+.+ .||+++ ++.++.+..++. +..|.+.
T Consensus 220 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~~~~-v~~v~~~~~~~~~~ 297 (456)
T 1lqt_A 220 -GVDVVIDPAELDGITDEDAAAVGKVCKQNIKVLRGYADREPRPGHRRMVFRFLTSPIEIKGKRK-VERIVLGRNELVSD 297 (456)
T ss_dssp -TEEEECCGGGGTTCCHHHHHHHCHHHHHHHHHHHHHHTCC-CTTSEEEEEECSEEEEEEECSSS-CCEEEEEEEEEEEC
T ss_pred -CceeeeChHHhccchhhhhhhccHHHHHHHHHHHHHhhcCCCCCCceEEEEeCCCCeEEecCCc-EeEEEEEEEEecCC
Confidence 000000000000 0000000011 12244556666655 689999 999999876532 3334332
Q ss_pred ---------Cc--eEEECceEEEccCCCC
Q 011835 230 ---------HD--MIVPCRLATVASGAAS 247 (476)
Q Consensus 230 ---------~g--~~i~a~~vV~A~G~~S 247 (476)
+| +++.+|.||.|.|..+
T Consensus 298 ~~~~~~~~~~g~~~~i~~d~vi~a~G~~p 326 (456)
T 1lqt_A 298 GSGRVAAKDTGEREELPAQLVVRSVGYRG 326 (456)
T ss_dssp SSSSEEEEEEEEEEEEECSEEEECSCEEC
T ss_pred CcccccccCCCceEEEEcCEEEEcccccc
Confidence 34 4689999999999655
No 279
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.48 E-value=9.1e-05 Score=80.31 Aligned_cols=37 Identities=27% Similarity=0.444 Sum_probs=33.5
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCC
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPF 142 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~ 142 (476)
...||+|||||++||++|+.|++.|++|+|||+....
T Consensus 277 ~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~ 313 (852)
T 2xag_A 277 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRV 313 (852)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcC
Confidence 4579999999999999999999999999999986543
No 280
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.46 E-value=0.00011 Score=78.95 Aligned_cols=92 Identities=16% Similarity=0.156 Sum_probs=63.8
Q ss_pred ccEEEEC--CCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCc
Q 011835 108 LDLVVIG--CGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAY 185 (476)
Q Consensus 108 ~dVvIIG--gG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (476)
.+|+||| ||..|+-+|..|++.|.+|+|+++.. ..... .+.
T Consensus 529 k~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~-l~~~~-----~~~------------------------------- 571 (729)
T 1o94_A 529 KRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH-LANYM-----HFT------------------------------- 571 (729)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC-TTHHH-----HHT-------------------------------
T ss_pred CeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc-ccccc-----ccc-------------------------------
Confidence 4799998 99999999999999999999998865 21100 000
Q ss_pred ceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEe--cCc-eE------------------EECceEEEcc
Q 011835 186 GRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVAC--EHD-MI------------------VPCRLATVAS 243 (476)
Q Consensus 186 ~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~--~~g-~~------------------i~a~~vV~A~ 243 (476)
... ..+.+.+++.||+++ +++++++.. + .+.+.. .++ ++ +.+|.||.|.
T Consensus 572 --~~~----~~~~~~l~~~GV~i~~~~~v~~i~~--~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~ 642 (729)
T 1o94_A 572 --LEY----PNMMRRLHELHVEELGDHFCSRIEP--G-RMEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVT 642 (729)
T ss_dssp --TCH----HHHHHHHHHTTCEEECSEEEEEEET--T-EEEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEES
T ss_pred --ccH----HHHHHHHHhCCCEEEcCcEEEEEEC--C-eEEEEEecCCceEEecccccccccccCCcceeeeCCEEEECC
Confidence 011 334556677899999 999999874 2 233332 232 22 7888888888
Q ss_pred CC
Q 011835 244 GA 245 (476)
Q Consensus 244 G~ 245 (476)
|.
T Consensus 643 G~ 644 (729)
T 1o94_A 643 GR 644 (729)
T ss_dssp CE
T ss_pred CC
Confidence 83
No 281
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.46 E-value=0.00022 Score=72.16 Aligned_cols=34 Identities=18% Similarity=0.187 Sum_probs=30.5
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCc-EEEECCCC
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGLN-VGLIGPDL 140 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~~-V~liE~~~ 140 (476)
..+|+|||||..|+-+|..+.+.|.+ |+++++..
T Consensus 264 gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~ 298 (456)
T 2vdc_G 264 GKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRD 298 (456)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCC
Confidence 35899999999999999999999985 99998765
No 282
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.45 E-value=4.5e-05 Score=78.87 Aligned_cols=34 Identities=29% Similarity=0.446 Sum_probs=31.8
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
..||+||||||+||+.+|..|++ |.+|+|||+..
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~ 58 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGS 58 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSB
T ss_pred CcccEEEECccHHHHHHHHHHhc-CCcEEEEecCC
Confidence 45999999999999999999999 99999999864
No 283
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.40 E-value=0.00036 Score=74.23 Aligned_cols=48 Identities=10% Similarity=0.124 Sum_probs=36.0
Q ss_pred HHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCc--eEEECceEEEccCCC
Q 011835 195 EELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHD--MIVPCRLATVASGAA 246 (476)
Q Consensus 195 ~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g--~~i~a~~vV~A~G~~ 246 (476)
..+.+.+++.||+++ +++|+.++. + .+.+. .+| +++.+|.||.|+|..
T Consensus 577 ~~~~~~l~~~GV~v~~~~~v~~i~~--~-~v~~~-~~G~~~~i~~D~Vi~a~G~~ 627 (671)
T 1ps9_A 577 WIHRTTLLSRGVKMIPGVSYQKIDD--D-GLHVV-INGETQVLAVDNVVICAGQE 627 (671)
T ss_dssp HHHHHHHHHTTCEEECSCEEEEEET--T-EEEEE-ETTEEEEECCSEEEECCCEE
T ss_pred HHHHHHHHhcCCEEEeCcEEEEEeC--C-eEEEe-cCCeEEEEeCCEEEECCCcc
Confidence 345566778999999 999998873 3 33443 566 579999999999944
No 284
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.39 E-value=3.6e-05 Score=79.74 Aligned_cols=35 Identities=17% Similarity=0.179 Sum_probs=32.3
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCC
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLP 141 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~ 141 (476)
..+|+|||+|..|+-+|..|++.+.+|+|+++.+.
T Consensus 185 ~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~ 219 (545)
T 3uox_A 185 GKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPN 219 (545)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCC
T ss_pred CCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCC
Confidence 35899999999999999999999999999998765
No 285
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=97.36 E-value=0.00027 Score=71.33 Aligned_cols=78 Identities=6% Similarity=-0.019 Sum_probs=58.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCc-EEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcc
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLN-VGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYG 186 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~-V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (476)
.+|+|||+|..|+-+|..|++.|.+ |+|+++....
T Consensus 213 k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~~~-------------------------------------------- 248 (447)
T 2gv8_A 213 ESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGGD-------------------------------------------- 248 (447)
T ss_dssp CCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTCCS--------------------------------------------
T ss_pred CEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCCCc--------------------------------------------
Confidence 5799999999999999999999999 9999886521
Q ss_pred eecHHHHHHHHHHHHHHCCCeEEEEEEEEEEEcCCceEEEEecCceE-EECceEEEccCCCC
Q 011835 187 RVSRHLLHEELLRRCVESGVSYLSSKVESITESTSGHRLVACEHDMI-VPCRLATVASGAAS 247 (476)
Q Consensus 187 ~i~r~~l~~~L~~~~~~~gv~i~~~~v~~i~~~~~~~~~v~~~~g~~-i~a~~vV~A~G~~S 247 (476)
+...||.+ ...|+.+..+++ .|.+.||++ +.+|.||.|+|...
T Consensus 249 --------------l~~~~i~~-~~~v~~~~~~~~---~v~~~dG~~~~~~D~vi~atG~~~ 292 (447)
T 2gv8_A 249 --------------IQNESLQQ-VPEITKFDPTTR---EIYLKGGKVLSNIDRVIYCTGYLY 292 (447)
T ss_dssp --------------CBCSSEEE-ECCEEEEETTTT---EEEETTTEEECCCSEEEECCCBCC
T ss_pred --------------CCCCCeEE-ecCeEEEecCCC---EEEECCCCEeccCCEEEECCCCCc
Confidence 11234432 456666653332 567788876 68999999999654
No 286
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=97.34 E-value=0.00012 Score=76.03 Aligned_cols=36 Identities=25% Similarity=0.358 Sum_probs=32.5
Q ss_pred CCcccEEEECCCHHHHHHHHHHHHc-CCcEEEECCCC
Q 011835 105 NGILDLVVIGCGPAGLALAAESAKL-GLNVGLIGPDL 140 (476)
Q Consensus 105 ~~~~dVvIIGgG~aGl~~A~~La~~-G~~V~liE~~~ 140 (476)
...||+||||||.||+++|..|++. +.+|+|||+..
T Consensus 17 ~~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 17 GRTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 3569999999999999999999974 89999999865
No 287
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=97.29 E-value=0.00048 Score=69.81 Aligned_cols=79 Identities=6% Similarity=-0.004 Sum_probs=58.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcce
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYGR 187 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (476)
-+|+|||+|..|+-+|..|++.|.+|+|+++....... .
T Consensus 198 k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~~~~~-----------------------------------------~ 236 (464)
T 2xve_A 198 KTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAPMGY-----------------------------------------K 236 (464)
T ss_dssp SEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSCCCCC-----------------------------------------C
T ss_pred CEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCCCCCC-----------------------------------------C
Confidence 57999999999999999999999999999875531100 0
Q ss_pred ecHHHHHHHHHHHHHHCCCeEEEEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCC
Q 011835 188 VSRHLLHEELLRRCVESGVSYLSSKVESITESTSGHRLVACEHDMIVPCRLATVASGAAS 247 (476)
Q Consensus 188 i~r~~l~~~L~~~~~~~gv~i~~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S 247 (476)
+ ..||+++ ..|+.++ ++ .|.+.||+++.+|.||.|+|...
T Consensus 237 ~--------------~~~V~~~-~~V~~i~--~~---~V~~~dG~~i~~D~Vi~atG~~p 276 (464)
T 2xve_A 237 W--------------PENWDER-PNLVRVD--TE---NAYFADGSSEKVDAIILCTGYIH 276 (464)
T ss_dssp C--------------CTTEEEC-SCEEEEC--SS---EEEETTSCEEECSEEEECCCBCC
T ss_pred C--------------CCceEEc-CCeEEEe--CC---EEEECCCCEEeCCEEEECCCCCC
Confidence 0 0255555 4566663 22 46778998999999999999543
No 288
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=97.27 E-value=0.00018 Score=73.82 Aligned_cols=35 Identities=23% Similarity=0.283 Sum_probs=32.5
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
..+|++|||+|++|+++|..|++.|++|+|||+..
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~ 38 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQ 38 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 45899999999999999999999999999999764
No 289
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=97.27 E-value=0.00078 Score=66.97 Aligned_cols=50 Identities=12% Similarity=0.178 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccCCC
Q 011835 192 LLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAA 246 (476)
Q Consensus 192 ~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~ 246 (476)
.+.+.+.+.+++.||+++ +++|++++.+ .|.+.+|+++.+|.||.|+|..
T Consensus 219 ~~~~~~~~~l~~~gV~~~~~~~v~~i~~~-----~v~~~~g~~~~~D~vi~a~G~~ 269 (409)
T 3h8l_A 219 NSRKAVASIYNQLGIKLVHNFKIKEIREH-----EIVDEKGNTIPADITILLPPYT 269 (409)
T ss_dssp HHHHHHHHHHHHHTCEEECSCCEEEECSS-----EEEETTSCEEECSEEEEECCEE
T ss_pred HHHHHHHHHHHHCCCEEEcCCceEEECCC-----eEEECCCCEEeeeEEEECCCCC
Confidence 366667777888999999 9999988642 3777889899999999999943
No 290
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=97.23 E-value=0.00026 Score=72.63 Aligned_cols=35 Identities=20% Similarity=0.290 Sum_probs=32.6
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
..+|++|||+|++|+++|..|++.|.+|+|||+..
T Consensus 10 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~ 44 (507)
T 1coy_A 10 DRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGR 44 (507)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCC
Confidence 46899999999999999999999999999999754
No 291
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=97.23 E-value=0.0002 Score=74.74 Aligned_cols=36 Identities=25% Similarity=0.397 Sum_probs=32.8
Q ss_pred CCcccEEEECCCHHHHHHHHHHHH-cCCcEEEECCCC
Q 011835 105 NGILDLVVIGCGPAGLALAAESAK-LGLNVGLIGPDL 140 (476)
Q Consensus 105 ~~~~dVvIIGgG~aGl~~A~~La~-~G~~V~liE~~~ 140 (476)
...+|++|||+|++|+++|..|++ .|.+|+|||+..
T Consensus 22 ~~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~ 58 (587)
T 1gpe_A 22 GKTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGF 58 (587)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSC
T ss_pred cccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 356999999999999999999999 899999999754
No 292
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=97.19 E-value=0.00035 Score=67.59 Aligned_cols=32 Identities=22% Similarity=0.393 Sum_probs=29.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
.+|+|||+|..|+-+|..|++.| +|+++.+..
T Consensus 164 ~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~ 195 (357)
T 4a9w_A 164 MRVAIIGGGNSGAQILAEVSTVA-ETTWITQHE 195 (357)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTS-EEEEECSSC
T ss_pred CEEEEECCCcCHHHHHHHHHhhC-CEEEEECCC
Confidence 58999999999999999999998 799998763
No 293
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=97.19 E-value=0.00061 Score=70.56 Aligned_cols=35 Identities=17% Similarity=0.113 Sum_probs=32.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCC
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLP 141 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~ 141 (476)
...|+|||+|..|+-+|..|++.|.+|+|+++.+.
T Consensus 191 ~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 191 GKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSAN 225 (549)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 35899999999999999999999999999998775
No 294
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=97.16 E-value=0.00021 Score=75.57 Aligned_cols=36 Identities=25% Similarity=0.493 Sum_probs=32.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHcC--------CcEEEECCCC-CC
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLG--------LNVGLIGPDL-PF 142 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G--------~~V~liE~~~-~~ 142 (476)
..+|+|||||++||++|+.|++.| ++|+|+|+.. ..
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 468999999999999999999999 9999999876 44
No 295
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=97.15 E-value=0.00015 Score=75.24 Aligned_cols=34 Identities=29% Similarity=0.431 Sum_probs=31.4
Q ss_pred cccEEEECCCHHHHHHHHHHHH-cCCcEEEECCCC
Q 011835 107 ILDLVVIGCGPAGLALAAESAK-LGLNVGLIGPDL 140 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~-~G~~V~liE~~~ 140 (476)
.||+||||||.||+.+|..|++ .|.+|+|||+..
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~ 36 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGV 36 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSB
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCC
Confidence 4899999999999999999999 799999999854
No 296
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=97.13 E-value=0.00029 Score=72.96 Aligned_cols=35 Identities=31% Similarity=0.469 Sum_probs=32.3
Q ss_pred CcccEEEECCCHHHHHHHHHHHHc-CCcEEEECCCC
Q 011835 106 GILDLVVIGCGPAGLALAAESAKL-GLNVGLIGPDL 140 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~-G~~V~liE~~~ 140 (476)
..+|++|||+|++|+++|..|++. |.+|+|||+..
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~ 47 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGP 47 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCC
Confidence 468999999999999999999998 99999999864
No 297
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=97.05 E-value=0.0035 Score=59.55 Aligned_cols=33 Identities=21% Similarity=0.204 Sum_probs=30.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
-+|+|||||+.|+-+|..|++.|.+|+|+|+..
T Consensus 146 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 178 (312)
T 4gcm_A 146 KRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRD 178 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeccc
Confidence 379999999999999999999999999999865
No 298
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=96.95 E-value=0.00098 Score=66.76 Aligned_cols=50 Identities=14% Similarity=0.217 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecC----ceEEECceEEEccCCCC
Q 011835 193 LHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEH----DMIVPCRLATVASGAAS 247 (476)
Q Consensus 193 l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~----g~~i~a~~vV~A~G~~S 247 (476)
+...+.+.+++.||+++ +++|++++.+ . +.+++ ++++.+|.||.|+|...
T Consensus 202 ~~~~l~~~l~~~GV~i~~~~~v~~v~~~---~--v~~~~~~~~g~~i~~D~vv~a~G~~~ 256 (430)
T 3h28_A 202 SKRLVEDLFAERNIDWIANVAVKAIEPD---K--VIYEDLNGNTHEVPAKFTMFMPSFQG 256 (430)
T ss_dssp HHHHHHHHHHHTTCEEECSCEEEEECSS---E--EEEECTTSCEEEEECSEEEEECEEEC
T ss_pred HHHHHHHHHHHCCCEEEeCCEEEEEeCC---e--EEEEecCCCceEEeeeEEEECCCCcc
Confidence 44566677788999999 9999998642 2 33344 67899999999999543
No 299
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=96.94 E-value=0.0014 Score=65.71 Aligned_cols=95 Identities=19% Similarity=0.311 Sum_probs=61.9
Q ss_pred cEEEECCCHHH------H----HHHHHHHHcCCc-----EEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeee
Q 011835 109 DLVVIGCGPAG------L----ALAAESAKLGLN-----VGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYI 173 (476)
Q Consensus 109 dVvIIGgG~aG------l----~~A~~La~~G~~-----V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~ 173 (476)
+++|||+|+.| + .+|..|.+.|.+ |+++++.+.... .+ +
T Consensus 151 ~~vVVGgG~~~g~~G~~~E~a~~la~~l~~~g~~~~~~~Vtlv~~~~~~~~-~~----------l--------------- 204 (437)
T 3sx6_A 151 GPIVIGAMAGASCFGPAYEYAMIVASDLKKRGMRDKIPSFTFITSEPYIGH-LG----------I--------------- 204 (437)
T ss_dssp CCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCSCEEEEESSSSTTC-TT----------T---------------
T ss_pred CEEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCcccCcEEEEEcCCccccc-cc----------c---------------
Confidence 57899997654 4 444677788875 999987653211 00 0
Q ss_pred CCCCCEEeccCcceecHHHHHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEe--cC-----ceEEECceEEEccCC
Q 011835 174 DEDEPILIGRAYGRVSRHLLHEELLRRCVESGVSYL-SSKVESITESTSGHRLVAC--EH-----DMIVPCRLATVASGA 245 (476)
Q Consensus 174 ~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~--~~-----g~~i~a~~vV~A~G~ 245 (476)
..+. .+...+.+.+++.||+++ +++|++++.+ .+.+.. .+ +.++.+|.||.|.|.
T Consensus 205 ------------~~~~--~~~~~~~~~l~~~gI~~~~~~~v~~v~~~---~v~~~~~~~~g~~~~~~~i~~D~vv~~~g~ 267 (437)
T 3sx6_A 205 ------------QGVG--DSKGILTKGLKEEGIEAYTNCKVTKVEDN---KMYVTQVDEKGETIKEMVLPVKFGMMIPAF 267 (437)
T ss_dssp ------------TCCT--THHHHHHHHHHHTTCEEECSEEEEEEETT---EEEEEEECTTSCEEEEEEEECSEEEEECCE
T ss_pred ------------Ccch--HHHHHHHHHHHHCCCEEEcCCEEEEEECC---eEEEEecccCCccccceEEEEeEEEEcCCC
Confidence 0011 134556677788999999 9999998643 233322 23 567899999999984
Q ss_pred C
Q 011835 246 A 246 (476)
Q Consensus 246 ~ 246 (476)
.
T Consensus 268 ~ 268 (437)
T 3sx6_A 268 K 268 (437)
T ss_dssp E
T ss_pred c
Confidence 4
No 300
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=96.86 E-value=0.0013 Score=62.46 Aligned_cols=87 Identities=6% Similarity=0.077 Sum_probs=63.3
Q ss_pred ccEEEECCCH-HHHHHHHHHHHcCCcEEEECCCCCCCCCcccchHHHHhcCcchhhhhhcccceeeeCCCCCEEeccCcc
Q 011835 108 LDLVVIGCGP-AGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFRDLGLEGCIEHVWRDTVVYIDEDEPILIGRAYG 186 (476)
Q Consensus 108 ~dVvIIGgG~-aGl~~A~~La~~G~~V~liE~~~~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (476)
.+++|||||. +++.+|..+.+.|.+|+|+++...
T Consensus 147 ~~~~VIggG~~~~~e~a~~~~~~~~~v~i~~~~~~--------------------------------------------- 181 (304)
T 4fk1_A 147 QPLIIISENEDHTLHMTKLVYNWSTDLVIATNGNE--------------------------------------------- 181 (304)
T ss_dssp SCEEEECCSHHHHHHHHHHHTTTCSCEEEECSSCC---------------------------------------------
T ss_pred CceeeecCCCchhhhHHHHHHhCCceEEEEecccc---------------------------------------------
Confidence 3678888775 568889899899999999976442
Q ss_pred eecHHHHHHHHHHHHHHCCCeEEEEEEEEEEEcCCceEEEEecCceEEECceEEEccCC
Q 011835 187 RVSRHLLHEELLRRCVESGVSYLSSKVESITESTSGHRLVACEHDMIVPCRLATVASGA 245 (476)
Q Consensus 187 ~i~r~~l~~~L~~~~~~~gv~i~~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~ 245 (476)
+.. .+.+.+.+.|+.++...++.+..+++....|.+.+|+++.+|.+|++.|.
T Consensus 182 -~~~-----~~~~~l~~~g~~~~~~~v~~~~~~~~~~~~v~~~~g~~i~~~~~vi~~g~ 234 (304)
T 4fk1_A 182 -LSQ-----TIMDELSNKNIPVITESIRTLQGEGGYLKKVEFHSGLRIERAGGFIVPTF 234 (304)
T ss_dssp -CCH-----HHHHHHHTTTCCEECSCEEEEESGGGCCCEEEETTSCEECCCEEEECCEE
T ss_pred -chh-----hhhhhhhccceeEeeeeEEEeecCCCeeeeeeccccceeeecceeeeecc
Confidence 111 12445667899999445777776655456788999998998888887773
No 301
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=96.62 E-value=0.002 Score=67.19 Aligned_cols=54 Identities=13% Similarity=0.132 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHHCCCeEE-EEEEEEEEEcC--CceEEEEecCceEEECceEEEccC
Q 011835 191 HLLHEELLRRCVESGVSYL-SSKVESITEST--SGHRLVACEHDMIVPCRLATVASG 244 (476)
Q Consensus 191 ~~l~~~L~~~~~~~gv~i~-~~~v~~i~~~~--~~~~~v~~~~g~~i~a~~vV~A~G 244 (476)
..|.+.|.+.+...|++++ ++.|..|..++ ++..+|...+|+++.||.||....
T Consensus 378 g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~~~ 434 (650)
T 1vg0_A 378 GELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIEDS 434 (650)
T ss_dssp THHHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEEGG
T ss_pred hHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEEChh
Confidence 3466777777888999999 99999998876 546677777899999999998544
No 302
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=95.97 E-value=0.0072 Score=51.06 Aligned_cols=34 Identities=24% Similarity=0.406 Sum_probs=31.2
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
...|+|+|+|..|..+|..|.+.|++|++++++.
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3579999999999999999999999999998865
No 303
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.88 E-value=0.011 Score=48.94 Aligned_cols=33 Identities=15% Similarity=0.223 Sum_probs=31.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
-.|+|+|+|..|..+|..|.+.|++|+++|++.
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 479999999999999999999999999999875
No 304
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=95.84 E-value=0.0086 Score=49.19 Aligned_cols=33 Identities=27% Similarity=0.464 Sum_probs=30.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
.+|+|||+|..|..+|..|.+.|++|+++|++.
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 579999999999999999999999999998854
No 305
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=95.55 E-value=0.013 Score=48.37 Aligned_cols=33 Identities=27% Similarity=0.393 Sum_probs=30.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
..|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 479999999999999999999999999999865
No 306
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=95.52 E-value=0.033 Score=57.34 Aligned_cols=36 Identities=22% Similarity=0.291 Sum_probs=32.3
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCC
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPF 142 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~ 142 (476)
...|+|||+|..|+-+|..|++.|.+|+++++.+..
T Consensus 186 gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~~ 221 (542)
T 1w4x_A 186 GQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPHF 221 (542)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCC
T ss_pred CCEEEEECCCccHHHHHHHHhhcCceEEEEEcCCcc
Confidence 358999999999999999999999999999986643
No 307
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=95.31 E-value=0.018 Score=54.44 Aligned_cols=33 Identities=30% Similarity=0.365 Sum_probs=30.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
..|.|||+|..|...|..|++.|++|+++|++.
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 469999999999999999999999999999865
No 308
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.29 E-value=0.021 Score=48.02 Aligned_cols=33 Identities=18% Similarity=0.145 Sum_probs=30.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
..|+|+|+|..|..+|..|.+.|++|+++|++.
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 379999999999999999999999999999864
No 309
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=95.29 E-value=0.023 Score=57.82 Aligned_cols=49 Identities=12% Similarity=0.133 Sum_probs=39.3
Q ss_pred HHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccCCCCC
Q 011835 199 RRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGAASG 248 (476)
Q Consensus 199 ~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~~S~ 248 (476)
+.+++.||+++ ++.|+++..+++ ...|.+.+|+++.+|.||.|+|..+.
T Consensus 265 ~~l~~~GV~v~~~~~v~~i~~~~~-v~~v~~~~g~~i~aD~Vv~a~G~~p~ 314 (493)
T 1y56_A 265 QELERWGIDYVHIPNVKRVEGNEK-VERVIDMNNHEYKVDALIFADGRRPD 314 (493)
T ss_dssp HHHHHHTCEEEECSSEEEEECSSS-CCEEEETTCCEEECSEEEECCCEEEC
T ss_pred HHHHhCCcEEEeCCeeEEEecCCc-eEEEEeCCCeEEEeCEEEECCCcCcC
Confidence 34556799999 999999986544 55677888889999999999997653
No 310
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=95.22 E-value=0.16 Score=51.64 Aligned_cols=34 Identities=21% Similarity=0.295 Sum_probs=29.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHc--CCcEEEECCCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKL--GLNVGLIGPDLP 141 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~--G~~V~liE~~~~ 141 (476)
.+|+|||+|-+|.-++..|++. +.+|+++-|.+.
T Consensus 247 KrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~~ 282 (501)
T 4b63_A 247 YNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDSA 282 (501)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSSS
T ss_pred cEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCCc
Confidence 4799999999999999999876 789999977653
No 311
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=95.15 E-value=0.02 Score=45.27 Aligned_cols=33 Identities=27% Similarity=0.405 Sum_probs=30.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHcC-CcEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLG-LNVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G-~~V~liE~~~ 140 (476)
..|+|+|+|..|..++..|.+.| ++|+++++..
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 47999999999999999999999 8999998854
No 312
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=94.74 E-value=0.026 Score=46.39 Aligned_cols=32 Identities=25% Similarity=0.359 Sum_probs=29.8
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 109 DLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 109 dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
.|+|+|+|..|..+|..|.+.|++|++++++.
T Consensus 8 ~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 8 QFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred cEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 69999999999999999999999999998754
No 313
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.74 E-value=0.027 Score=48.82 Aligned_cols=33 Identities=18% Similarity=0.099 Sum_probs=30.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHc-CCcEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKL-GLNVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~-G~~V~liE~~~ 140 (476)
..|+|+|+|..|..+|..|.+. |++|+++|++.
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 4799999999999999999999 99999999865
No 314
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=94.69 E-value=0.088 Score=52.41 Aligned_cols=52 Identities=10% Similarity=0.138 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCc--eEEECceEEEccCCCC
Q 011835 193 LHEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHD--MIVPCRLATVASGAAS 247 (476)
Q Consensus 193 l~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g--~~i~a~~vV~A~G~~S 247 (476)
..+.+.+.+++.||+++ +++|++++. + .+.+...+| +++.+|.||.|.|...
T Consensus 202 ~~~~l~~~l~~~GV~~~~~~~v~~v~~--~-~~~~~~~~g~~~~i~~d~vi~~~G~~~ 256 (430)
T 3hyw_A 202 SKRLVEDLFAERNIDWIANVAVKAIEP--D-KVIYEDLNGNTHEVPAKFTMFMPSFQG 256 (430)
T ss_dssp HHHHHHHHHHHTTCEEECSCEEEEECS--S-EEEEECTTSCEEEEECSEEEEECEEEC
T ss_pred HHHHHHHHHHhCCeEEEeCceEEEEeC--C-ceEEEeeCCCceEeecceEEEeccCCC
Confidence 34455666778999999 999998864 3 344444443 5899999999999543
No 315
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=94.46 E-value=0.044 Score=52.58 Aligned_cols=35 Identities=23% Similarity=0.135 Sum_probs=31.7
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCC-cEEEECCCC
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLGL-NVGLIGPDL 140 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G~-~V~liE~~~ 140 (476)
...+|+|||+|-.|.++|..|++.|+ +|+|+|.+.
T Consensus 8 ~~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 8 RRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 34689999999999999999999998 999999865
No 316
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=94.34 E-value=0.025 Score=55.72 Aligned_cols=51 Identities=4% Similarity=-0.036 Sum_probs=40.2
Q ss_pred HHHHHHHHHHCCCeEE-EEEEEEEEEcCCceEEEEecCceEEECceEEEccCC
Q 011835 194 HEELLRRCVESGVSYL-SSKVESITESTSGHRLVACEHDMIVPCRLATVASGA 245 (476)
Q Consensus 194 ~~~L~~~~~~~gv~i~-~~~v~~i~~~~~~~~~v~~~~g~~i~a~~vV~A~G~ 245 (476)
.+.+.+.+++.||+++ ++++..++.+.+ ...|.+.+|+++.+|.||.|.|.
T Consensus 205 ~~~~~~~l~~~gi~v~~~~~v~~v~~~~~-~~~v~~~~g~~i~~D~vi~~~g~ 256 (401)
T 3vrd_B 205 ERLYGFGTENALIEWHPGPDAAVVKTDTE-AMTVETSFGETFKAAVINLIPPQ 256 (401)
T ss_dssp HHHSCTTSTTCSEEEECTTTTCEEEEETT-TTEEEETTSCEEECSEEEECCCE
T ss_pred HHHHHHHHHhcCcEEEeCceEEEEEeccc-ceEEEcCCCcEEEeeEEEEecCc
Confidence 3334444567899999 999988887766 56788899999999999999883
No 317
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=94.29 E-value=0.035 Score=49.67 Aligned_cols=32 Identities=22% Similarity=0.263 Sum_probs=30.3
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 109 DLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 109 dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
+|+|+|+|..|..+|..|.+.|++|+++|++.
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 69999999999999999999999999999865
No 318
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=94.21 E-value=0.045 Score=52.02 Aligned_cols=33 Identities=27% Similarity=0.331 Sum_probs=30.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
-.|.|||+|..|...|..++..|++|+|+|..+
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CeEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 479999999999999999999999999999865
No 319
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=94.18 E-value=0.046 Score=49.05 Aligned_cols=35 Identities=14% Similarity=0.233 Sum_probs=31.5
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
....|+|||||..|...|..|.+.|.+|+|+++..
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~ 64 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTV 64 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 34589999999999999999999999999998754
No 320
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=94.00 E-value=0.055 Score=53.00 Aligned_cols=34 Identities=29% Similarity=0.397 Sum_probs=31.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
...|+|||+|++|+.+|..|...|.+|+++|+..
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 223 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVRP 223 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSST
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4689999999999999999999999999999876
No 321
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=93.55 E-value=0.068 Score=49.98 Aligned_cols=33 Identities=24% Similarity=0.338 Sum_probs=30.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
..|.|||+|..|...|..|++.|++|+++|++.
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 479999999999999999999999999999865
No 322
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=93.44 E-value=0.065 Score=52.03 Aligned_cols=34 Identities=26% Similarity=0.303 Sum_probs=31.5
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
...|+|||+|.+|+.+|..|...|.+|+++|+..
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4589999999999999999999999999999865
No 323
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=93.44 E-value=0.074 Score=50.69 Aligned_cols=33 Identities=33% Similarity=0.430 Sum_probs=30.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
.+|+|||+|..|.+.|..|++.|++|++++|+.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 479999999999999999999999999998854
No 324
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=93.34 E-value=0.041 Score=51.03 Aligned_cols=34 Identities=29% Similarity=0.467 Sum_probs=30.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
...|+|||||..|+..|..|.+.|.+|+|+++..
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 3579999999999999999999999999998643
No 325
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=93.32 E-value=0.074 Score=48.70 Aligned_cols=33 Identities=27% Similarity=0.399 Sum_probs=30.5
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCC-cEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGL-NVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~-~V~liE~~~ 140 (476)
..|+|||+|..|..+|..|++.|. +++|+|++.
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 579999999999999999999998 799999875
No 326
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=93.20 E-value=0.088 Score=49.07 Aligned_cols=32 Identities=25% Similarity=0.284 Sum_probs=30.2
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 109 DLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 109 dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
+|.|||+|..|...|..|++.|++|++++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 33 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVP 33 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCc
Confidence 59999999999999999999999999998865
No 327
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=93.15 E-value=0.1 Score=46.25 Aligned_cols=35 Identities=20% Similarity=0.305 Sum_probs=31.3
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCC
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLP 141 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~ 141 (476)
...|.|||+|-.|.+.|..|++.|++|+++++...
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 35799999999999999999999999999988653
No 328
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=93.11 E-value=0.089 Score=50.02 Aligned_cols=33 Identities=33% Similarity=0.438 Sum_probs=30.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCC--cEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGL--NVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~--~V~liE~~~ 140 (476)
.+|+|||+|-.|.++|..|++.|+ +|+++|++.
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 589999999999999999999999 999999864
No 329
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=93.11 E-value=0.038 Score=55.60 Aligned_cols=34 Identities=18% Similarity=0.388 Sum_probs=31.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
.++|+|+|+|-.|..+|..|.+.|++|+|||+++
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCH
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 4689999999999999999999999999999865
No 330
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=93.08 E-value=0.086 Score=53.24 Aligned_cols=34 Identities=32% Similarity=0.479 Sum_probs=31.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
.++|.|||+|..|+.+|..|++.|++|+++|++.
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 3689999999999999999999999999998754
No 331
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=93.06 E-value=0.095 Score=50.76 Aligned_cols=34 Identities=29% Similarity=0.343 Sum_probs=31.5
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
..+|.|||+|--|.+.|..|++.|++|++++++.
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 4689999999999999999999999999998864
No 332
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=93.03 E-value=0.096 Score=49.86 Aligned_cols=33 Identities=27% Similarity=0.331 Sum_probs=31.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
..|.|||+|..|...|..|++.|++|+++|++.
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 479999999999999999999999999999865
No 333
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=93.02 E-value=0.081 Score=53.08 Aligned_cols=33 Identities=30% Similarity=0.265 Sum_probs=30.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
..|.|||.|.+|+++|..|+++|++|++.|...
T Consensus 10 k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 10 KKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp CEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 479999999999999999999999999999754
No 334
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=92.93 E-value=0.11 Score=49.36 Aligned_cols=33 Identities=30% Similarity=0.262 Sum_probs=30.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCC-cEEEECCC
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGL-NVGLIGPD 139 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~-~V~liE~~ 139 (476)
..+|.|||+|..|.++|..|+..|+ +|+++|..
T Consensus 8 ~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 8 RKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 4589999999999999999999999 99999986
No 335
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=92.91 E-value=0.099 Score=49.36 Aligned_cols=33 Identities=24% Similarity=0.306 Sum_probs=30.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
.+|.|||+|..|...|..|++.|++|++++++.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 479999999999999999999999999998854
No 336
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=92.87 E-value=0.1 Score=50.05 Aligned_cols=32 Identities=22% Similarity=0.388 Sum_probs=30.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPD 139 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~ 139 (476)
.+|.|||+|-.|.+.|..|++.|++|+++++.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 47999999999999999999999999999873
No 337
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=92.86 E-value=0.089 Score=49.91 Aligned_cols=33 Identities=24% Similarity=0.361 Sum_probs=30.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
.+|.|||+|-.|.+.|..|++.|++|++++|..
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 479999999999999999999999999998854
No 338
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=92.86 E-value=2.1 Score=46.33 Aligned_cols=41 Identities=15% Similarity=0.177 Sum_probs=33.5
Q ss_pred CCeEE-EEEEEEEEEcCCceEEEEecC------ceEEECceEEEccCCC
Q 011835 205 GVSYL-SSKVESITESTSGHRLVACEH------DMIVPCRLATVASGAA 246 (476)
Q Consensus 205 gv~i~-~~~v~~i~~~~~~~~~v~~~~------g~~i~a~~vV~A~G~~ 246 (476)
++.|+ +++|+.|..+++ .+.|++.+ +.+++||.||.|.-..
T Consensus 581 ~l~I~Lnt~V~~I~~~~~-gV~V~~~~~~~~~~g~~i~AD~VIvTvPl~ 628 (852)
T 2xag_A 581 GLDIKLNTAVRQVRYTAS-GCEVIAVNTRSTSQTFIYKCDAVLCTLPLG 628 (852)
T ss_dssp TCCEECSEEEEEEEEETT-EEEEEEEESSSTTCEEEEEESEEEECCCHH
T ss_pred CCCEEeCCeEEEEEEcCC-cEEEEEeecccCCCCeEEECCEEEECCCHH
Confidence 56788 999999999887 56777655 5789999999998744
No 339
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=92.86 E-value=0.061 Score=53.80 Aligned_cols=33 Identities=21% Similarity=0.355 Sum_probs=30.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
..|+|||.|++|+++|..|+++|++|+++|...
T Consensus 6 ~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~ 38 (439)
T 2x5o_A 6 KNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRM 38 (439)
T ss_dssp CCEEEECCHHHHHHHHHHHHTTTCCCEEEESSS
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCEEEEEECCC
Confidence 369999999999999999999999999998644
No 340
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=92.62 E-value=0.13 Score=50.98 Aligned_cols=35 Identities=29% Similarity=0.252 Sum_probs=31.9
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
....|.|||.|-.||.+|..|++.|++|+.+|-+.
T Consensus 20 ~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 20 HMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 45689999999999999999999999999998754
No 341
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=92.54 E-value=0.11 Score=51.31 Aligned_cols=34 Identities=32% Similarity=0.399 Sum_probs=31.1
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
...|+|||+|.+|+.+|..|...|.+|+++|+..
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 3579999999999999999999999999999865
No 342
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=92.45 E-value=0.14 Score=48.91 Aligned_cols=35 Identities=20% Similarity=0.305 Sum_probs=30.9
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCC--cEEEECCCC
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLGL--NVGLIGPDL 140 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G~--~V~liE~~~ 140 (476)
...+|+|||+|..|.++|..|+..|+ +++++|...
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~ 40 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQGITDELVVIDVNK 40 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecch
Confidence 34689999999999999999999998 899998753
No 343
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=92.42 E-value=0.12 Score=51.77 Aligned_cols=33 Identities=45% Similarity=0.580 Sum_probs=30.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
.+|.|||+|..|+.+|..|++.|++|+++|++.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 479999999999999999999999999999865
No 344
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=92.39 E-value=0.12 Score=50.51 Aligned_cols=34 Identities=29% Similarity=0.334 Sum_probs=31.1
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
...|+|+|+|.+|+.+|..|...|.+|+++|+..
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999999999999999865
No 345
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=92.34 E-value=0.13 Score=48.41 Aligned_cols=33 Identities=18% Similarity=0.300 Sum_probs=31.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
.+|.|||.|..|...|..|++.|++|++++++.
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 579999999999999999999999999998865
No 346
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=92.27 E-value=0.098 Score=49.50 Aligned_cols=32 Identities=31% Similarity=0.348 Sum_probs=29.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHc-----C-CcEEEECC
Q 011835 107 ILDLVVIGCGPAGLALAAESAKL-----G-LNVGLIGP 138 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~-----G-~~V~liE~ 138 (476)
..+|.|||+|..|.+.|..|++. | ++|+++++
T Consensus 8 ~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 8 PIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 35899999999999999999999 9 99999987
No 347
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=92.23 E-value=0.12 Score=50.18 Aligned_cols=33 Identities=24% Similarity=0.392 Sum_probs=30.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
..|+|+|+|.+|+.++..|+..|.+|+++++..
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 579999999999999999999999999998864
No 348
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=92.17 E-value=0.15 Score=48.52 Aligned_cols=34 Identities=24% Similarity=0.137 Sum_probs=30.5
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCC--cEEEECCCC
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGL--NVGLIGPDL 140 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~--~V~liE~~~ 140 (476)
..+|+|||+|-.|.++|+.|+..|+ +++++|.+.
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4689999999999999999999998 899998764
No 349
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=92.14 E-value=0.14 Score=48.32 Aligned_cols=32 Identities=25% Similarity=0.255 Sum_probs=29.8
Q ss_pred cEEEECCCHHHHHHHHHHHHcCC--cEEEECCCC
Q 011835 109 DLVVIGCGPAGLALAAESAKLGL--NVGLIGPDL 140 (476)
Q Consensus 109 dVvIIGgG~aGl~~A~~La~~G~--~V~liE~~~ 140 (476)
+|+|||+|-.|.++|..|+..|+ +|+++|.+.
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 69999999999999999999999 999999854
No 350
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=92.13 E-value=0.13 Score=50.77 Aligned_cols=33 Identities=15% Similarity=0.275 Sum_probs=30.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
..|+|||.|..|..+|..|.+.|++|++||+++
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~ 37 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDP 37 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEECCH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 479999999999999999999999999999865
No 351
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=92.06 E-value=0.16 Score=48.07 Aligned_cols=36 Identities=22% Similarity=0.371 Sum_probs=32.4
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCC
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLP 141 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~ 141 (476)
...+|.|||.|..|...|..|++.|++|++++++..
T Consensus 20 ~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 55 (310)
T 3doj_A 20 HMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLS 55 (310)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred cCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 346899999999999999999999999999998653
No 352
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=92.02 E-value=0.11 Score=48.71 Aligned_cols=33 Identities=30% Similarity=0.404 Sum_probs=30.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
.+|+|||+|-.|.+.|..|++.|++|++++|..
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 479999999999999999999999999998864
No 353
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=91.97 E-value=0.17 Score=48.14 Aligned_cols=33 Identities=30% Similarity=0.283 Sum_probs=30.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCC-cEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGL-NVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~-~V~liE~~~ 140 (476)
.+|+|||+|-.|.++|..|++.|+ +|+++|++.
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 479999999999999999999998 999999865
No 354
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=91.95 E-value=0.053 Score=44.90 Aligned_cols=33 Identities=15% Similarity=0.241 Sum_probs=30.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
..|+|||+|..|..+|..|++.|++|+++++..
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 479999999999999999999999999998865
No 355
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=91.94 E-value=0.15 Score=51.28 Aligned_cols=34 Identities=21% Similarity=0.144 Sum_probs=31.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHc-CC-cEEEECCCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKL-GL-NVGLIGPDLP 141 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~-G~-~V~liE~~~~ 141 (476)
.+|.|||+|..|+.+|..|++. |+ +|+++|++..
T Consensus 19 mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 19 KKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 5899999999999999999999 99 9999998764
No 356
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=91.83 E-value=0.17 Score=48.36 Aligned_cols=33 Identities=21% Similarity=0.249 Sum_probs=30.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCC-cEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGL-NVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~-~V~liE~~~ 140 (476)
.+|+|||+|-.|..+|..|+..|+ +|+|+|.+.
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 479999999999999999999999 999999865
No 357
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=91.82 E-value=0.17 Score=50.48 Aligned_cols=35 Identities=26% Similarity=0.350 Sum_probs=32.2
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCC
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLP 141 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~ 141 (476)
...+.|||.|-.|+.+|..|++.|++|++++++..
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 36899999999999999999999999999998764
No 358
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=91.81 E-value=0.14 Score=48.88 Aligned_cols=33 Identities=24% Similarity=0.342 Sum_probs=30.0
Q ss_pred ccEEEECCCHHHHH-HHHHHHHcCCcEEEECCCC
Q 011835 108 LDLVVIGCGPAGLA-LAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~-~A~~La~~G~~V~liE~~~ 140 (476)
..|.|||.|.+|++ +|..|.++|++|++.|+..
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~ 38 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKM 38 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred cEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 47999999999996 8899999999999999764
No 359
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=91.77 E-value=1.9 Score=43.34 Aligned_cols=36 Identities=25% Similarity=0.189 Sum_probs=30.3
Q ss_pred CCeeEeccccCccCCcchHHHHHHHHhHHHHHHHHHHHhccC
Q 011835 371 QRNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAYILKHD 412 (476)
Q Consensus 371 ~rv~liGDAAh~~~P~~G~G~~~Al~da~~la~~l~~~l~~~ 412 (476)
+++.++|++.+ |.|++-|+.+|..+|+.|.+.+...
T Consensus 461 ~~l~~aG~~~~------g~~v~gai~sG~~aA~~il~~l~~~ 496 (504)
T 1sez_A 461 PGLFYAGNHRG------GLSVGKALSSGCNAADLVISYLESV 496 (504)
T ss_dssp TTEEECCSSSS------CSSHHHHHHHHHHHHHHHHHHHSSC
T ss_pred CCEEEEeecCC------CCCHHHHHHHHHHHHHHHHHHHhhc
Confidence 78999999864 4589999999999999999877543
No 360
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=91.66 E-value=0.17 Score=48.73 Aligned_cols=33 Identities=33% Similarity=0.261 Sum_probs=30.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
.+|.|||+|..|...|..|++.|++|++++++.
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 479999999999999999999999999998854
No 361
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=91.65 E-value=0.2 Score=49.98 Aligned_cols=34 Identities=24% Similarity=0.266 Sum_probs=31.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLP 141 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~ 141 (476)
..|.|||+|..|...|..|++.|++|+++|++..
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 4799999999999999999999999999998763
No 362
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=91.53 E-value=0.15 Score=50.95 Aligned_cols=32 Identities=19% Similarity=0.153 Sum_probs=30.0
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 109 DLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 109 dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
+|.|||+|..|+.+|..|++.|++|++++++.
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 69999999999999999999999999998754
No 363
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=91.51 E-value=0.18 Score=48.22 Aligned_cols=33 Identities=24% Similarity=0.276 Sum_probs=30.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
.+|.|||+|..|.+.|..|++.|++|+++++..
T Consensus 15 ~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~ 47 (335)
T 1z82_A 15 MRFFVLGAGSWGTVFAQMLHENGEEVILWARRK 47 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 589999999999999999999999999998854
No 364
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=91.50 E-value=0.19 Score=50.70 Aligned_cols=33 Identities=30% Similarity=0.363 Sum_probs=30.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
..|.|||+|..|...|..|++.|++|+++|++.
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 479999999999999999999999999999865
No 365
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=91.44 E-value=0.17 Score=49.11 Aligned_cols=34 Identities=26% Similarity=0.390 Sum_probs=31.2
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCC-cEEEECCC
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLGL-NVGLIGPD 139 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G~-~V~liE~~ 139 (476)
.+..|||+|||.||..+|..|...|. +|+++|+.
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~ 221 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKF 221 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECC
Confidence 34689999999999999999999999 89999985
No 366
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=91.42 E-value=0.28 Score=46.30 Aligned_cols=34 Identities=29% Similarity=0.362 Sum_probs=31.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
..+|.|||.|..|...|..|++.|++|++++++.
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3589999999999999999999999999998865
No 367
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=91.39 E-value=0.18 Score=47.89 Aligned_cols=33 Identities=24% Similarity=0.348 Sum_probs=29.5
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
..+|+|||+|-.|.+.|..|++.|++|+++ ++.
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~ 51 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARP 51 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCH
T ss_pred CCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcH
Confidence 358999999999999999999999999999 543
No 368
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=91.39 E-value=0.17 Score=50.10 Aligned_cols=33 Identities=18% Similarity=0.212 Sum_probs=30.2
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
..+|.|||.|..|+.+|..|++ |++|+++|++.
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~ 68 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQ 68 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCH
T ss_pred CCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCH
Confidence 4589999999999999999998 99999999865
No 369
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=91.38 E-value=0.22 Score=47.40 Aligned_cols=33 Identities=24% Similarity=0.281 Sum_probs=30.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCC-cEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGL-NVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~-~V~liE~~~ 140 (476)
.+|+|||+|-.|..+|..|+..|+ +|+|+|.+.
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 479999999999999999999998 999998765
No 370
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=91.33 E-value=0.2 Score=47.01 Aligned_cols=33 Identities=27% Similarity=0.254 Sum_probs=30.6
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
...|.|||+|..|...|..|+ .|++|+++|+..
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 458999999999999999999 999999999865
No 371
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=91.31 E-value=0.16 Score=51.03 Aligned_cols=33 Identities=27% Similarity=0.426 Sum_probs=30.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
..|.|||+|..|...|..|++.|++|+++|++.
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 479999999999999999999999999998865
No 372
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=91.31 E-value=0.19 Score=46.87 Aligned_cols=34 Identities=26% Similarity=0.288 Sum_probs=31.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLP 141 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~ 141 (476)
..|.|||.|..|...|..|++.|++|++++++..
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPE 35 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 3699999999999999999999999999998653
No 373
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=91.14 E-value=0.21 Score=45.47 Aligned_cols=34 Identities=29% Similarity=0.422 Sum_probs=31.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
...|.|||+|-.|.++|..|++.|++|++++++.
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 4689999999999999999999999999998865
No 374
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=91.09 E-value=0.19 Score=48.92 Aligned_cols=33 Identities=21% Similarity=0.396 Sum_probs=30.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
..|+|+|+|..|+.+|..|+..|.+|+++++..
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 579999999999999999999999999998754
No 375
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=91.05 E-value=0.22 Score=47.11 Aligned_cols=32 Identities=25% Similarity=0.265 Sum_probs=29.3
Q ss_pred cEEEECCCHHHHHHHHHHHHc--CCcEEEECCCC
Q 011835 109 DLVVIGCGPAGLALAAESAKL--GLNVGLIGPDL 140 (476)
Q Consensus 109 dVvIIGgG~aGl~~A~~La~~--G~~V~liE~~~ 140 (476)
+|+|||+|-.|.++|..|++. |.+|+++|++.
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 699999999999999999985 78999999865
No 376
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=91.04 E-value=0.27 Score=46.55 Aligned_cols=34 Identities=18% Similarity=0.238 Sum_probs=31.1
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
...|.|||+|..|...|..|++.|++|++++++.
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~ 63 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTA 63 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3579999999999999999999999999998865
No 377
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=91.02 E-value=0.24 Score=47.10 Aligned_cols=34 Identities=26% Similarity=0.216 Sum_probs=31.1
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCC-cEEEECCCC
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGL-NVGLIGPDL 140 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~-~V~liE~~~ 140 (476)
..+|.|||+|..|.++|..|+..|+ +|+|+|.+.
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 3589999999999999999999999 999999865
No 378
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=91.00 E-value=0.19 Score=47.99 Aligned_cols=30 Identities=27% Similarity=0.422 Sum_probs=28.8
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCcEEEECC
Q 011835 109 DLVVIGCGPAGLALAAESAKLGLNVGLIGP 138 (476)
Q Consensus 109 dVvIIGgG~aGl~~A~~La~~G~~V~liE~ 138 (476)
.|.|||+|..|...|..|++.|++|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 599999999999999999999999999988
No 379
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=90.97 E-value=0.35 Score=45.97 Aligned_cols=34 Identities=26% Similarity=0.365 Sum_probs=30.6
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCC--cEEEECCCC
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGL--NVGLIGPDL 140 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~--~V~liE~~~ 140 (476)
..+|.|||+|..|.++|+.|+..|+ +|+++|...
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~ 56 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLMKDLADEVALVDVME 56 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCH
Confidence 4689999999999999999999998 899998744
No 380
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=90.93 E-value=0.083 Score=47.64 Aligned_cols=32 Identities=16% Similarity=0.255 Sum_probs=29.9
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEECC
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGP 138 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~ 138 (476)
..+|.|||.|..|.++|..|++.|++|+++++
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~ 37 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHA 37 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHHHTTCEEEECSS
T ss_pred CcEEEEEeeCHHHHHHHHHHHHCCCEEEEecC
Confidence 35899999999999999999999999999987
No 381
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=90.87 E-value=0.22 Score=46.99 Aligned_cols=32 Identities=28% Similarity=0.322 Sum_probs=29.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
.+|+|||+|-.|.+.|..|+ .|.+|+++.+..
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 47999999999999999999 999999998864
No 382
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=90.86 E-value=0.23 Score=45.92 Aligned_cols=33 Identities=21% Similarity=0.316 Sum_probs=30.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
..|+|+|+|.+|.++|..|++.|.+|+|++|..
T Consensus 120 k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~ 152 (271)
T 1nyt_A 120 LRILLIGAGGASRGVLLPLLSLDCAVTITNRTV 152 (271)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCEEEEEECCH
Confidence 479999999999999999999999999998764
No 383
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=90.82 E-value=0.27 Score=45.41 Aligned_cols=34 Identities=29% Similarity=0.468 Sum_probs=31.1
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
...|+|||+|.+|.++|..|++.|.+|+|+.|..
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~ 151 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSS 151 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999999999999998865
No 384
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=90.71 E-value=0.25 Score=43.91 Aligned_cols=33 Identities=18% Similarity=0.211 Sum_probs=30.5
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
..|.|||+|-.|...|..|++.|++|++++++.
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 579999999999999999999999999998754
No 385
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=90.61 E-value=0.22 Score=47.16 Aligned_cols=33 Identities=24% Similarity=0.339 Sum_probs=30.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCC-cEEEECCC
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGL-NVGLIGPD 139 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~-~V~liE~~ 139 (476)
...|.|||.|..|...|..|++.|+ +|+++++.
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 4589999999999999999999999 99999985
No 386
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=90.58 E-value=0.22 Score=48.53 Aligned_cols=34 Identities=32% Similarity=0.508 Sum_probs=31.0
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
...|+|||+|..|+.+|..|+..|.+|+++++..
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3579999999999999999999999999998754
No 387
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=90.57 E-value=0.31 Score=46.17 Aligned_cols=33 Identities=15% Similarity=0.257 Sum_probs=30.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCC--cEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGL--NVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~--~V~liE~~~ 140 (476)
..|.|||.|..|.+.|..|++.|+ +|++++++.
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 579999999999999999999999 999999865
No 388
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=90.49 E-value=0.26 Score=46.07 Aligned_cols=34 Identities=21% Similarity=0.359 Sum_probs=30.6
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCC-cEEEECCCC
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGL-NVGLIGPDL 140 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~-~V~liE~~~ 140 (476)
...|+|||+|-.|..+|..|++.|+ +++|+|.+.
T Consensus 36 ~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 3589999999999999999999997 688888866
No 389
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=90.47 E-value=0.2 Score=47.12 Aligned_cols=34 Identities=24% Similarity=0.267 Sum_probs=31.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLP 141 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~ 141 (476)
.+|.|||.|..|...|..|++.|++|++++++..
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 5799999999999999999999999999998764
No 390
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=90.45 E-value=0.25 Score=46.99 Aligned_cols=34 Identities=18% Similarity=0.337 Sum_probs=31.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
...|.|||.|..|...|..|++.|++|++++++.
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 3589999999999999999999999999998865
No 391
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=90.40 E-value=0.24 Score=47.83 Aligned_cols=32 Identities=25% Similarity=0.357 Sum_probs=29.8
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 109 DLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 109 dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
.|+|+|||.-|..+|+.+.+.|++|+++|.++
T Consensus 3 ~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~ 34 (363)
T 4ffl_A 3 TICLVGGKLQGFEAAYLSKKAGMKVVLVDKNP 34 (363)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESCT
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 69999999999999999999999999998754
No 392
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=90.29 E-value=0.21 Score=46.56 Aligned_cols=33 Identities=21% Similarity=0.318 Sum_probs=30.7
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCcEEEECCCCC
Q 011835 109 DLVVIGCGPAGLALAAESAKLGLNVGLIGPDLP 141 (476)
Q Consensus 109 dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~ 141 (476)
+|.|||.|..|...|..|++.|++|++++++..
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPA 35 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHHTCCEEEECSSGG
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 699999999999999999999999999998653
No 393
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=90.28 E-value=0.25 Score=46.91 Aligned_cols=32 Identities=25% Similarity=0.329 Sum_probs=29.8
Q ss_pred cEEEECCCHHHHHHHHHHHHcCC--cEEEECCCC
Q 011835 109 DLVVIGCGPAGLALAAESAKLGL--NVGLIGPDL 140 (476)
Q Consensus 109 dVvIIGgG~aGl~~A~~La~~G~--~V~liE~~~ 140 (476)
+|+|||+|-.|.++|..|++.|+ +|+++|++.
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK 35 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 69999999999999999999999 999999864
No 394
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=90.27 E-value=0.27 Score=49.24 Aligned_cols=33 Identities=30% Similarity=0.232 Sum_probs=30.5
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
..|+|+|+|..|..+|..|+..|.+|+++|+++
T Consensus 266 KtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~ 298 (488)
T 3ond_A 266 KVAVVAGYGDVGKGCAAALKQAGARVIVTEIDP 298 (488)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 479999999999999999999999999998855
No 395
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=90.23 E-value=0.25 Score=47.78 Aligned_cols=34 Identities=29% Similarity=0.388 Sum_probs=31.0
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCC-cEEEECCC
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLGL-NVGLIGPD 139 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G~-~V~liE~~ 139 (476)
.+..|+|+|+|-+|..+|..|...|. +|+++|+.
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 34689999999999999999999998 79999986
No 396
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=90.15 E-value=0.3 Score=47.25 Aligned_cols=34 Identities=18% Similarity=0.259 Sum_probs=31.5
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
..+|.|||.|..|...|..|++.|++|+++++..
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3589999999999999999999999999999865
No 397
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=90.15 E-value=0.27 Score=46.07 Aligned_cols=32 Identities=19% Similarity=0.124 Sum_probs=29.6
Q ss_pred cEEEECCCHHHHHHHHHHHHcCC--cEEEECCCC
Q 011835 109 DLVVIGCGPAGLALAAESAKLGL--NVGLIGPDL 140 (476)
Q Consensus 109 dVvIIGgG~aGl~~A~~La~~G~--~V~liE~~~ 140 (476)
+|+|||+|..|.++|..|+..|+ +|+|+|...
T Consensus 2 kI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh
Confidence 69999999999999999999998 899998755
No 398
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=90.04 E-value=0.26 Score=46.33 Aligned_cols=33 Identities=21% Similarity=0.291 Sum_probs=30.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
..|.|||+|..|...|..|++.|++|++++++.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 479999999999999999999999999998864
No 399
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=90.03 E-value=0.31 Score=46.04 Aligned_cols=33 Identities=24% Similarity=0.204 Sum_probs=30.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCC-cEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGL-NVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~-~V~liE~~~ 140 (476)
.+|+|||+|-.|..+|..|+..|+ +|+++|.+.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 379999999999999999999997 999998764
No 400
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=90.01 E-value=0.35 Score=45.93 Aligned_cols=33 Identities=24% Similarity=0.257 Sum_probs=30.5
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCC-cEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGL-NVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~-~V~liE~~~ 140 (476)
.+|.|||+|..|.++|..|+..|+ +|.|+|.+.
T Consensus 6 ~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 6 KKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 589999999999999999999998 999999765
No 401
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=90.00 E-value=0.28 Score=44.89 Aligned_cols=33 Identities=27% Similarity=0.305 Sum_probs=30.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCC-cEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGL-NVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~-~V~liE~~~ 140 (476)
..|+|||+|-.|..+|..|++.|+ +++|+|.+.
T Consensus 29 ~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~ 62 (251)
T 1zud_1 29 SQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDD 62 (251)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCB
T ss_pred CcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 589999999999999999999998 688888865
No 402
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=89.91 E-value=0.32 Score=44.99 Aligned_cols=32 Identities=22% Similarity=0.284 Sum_probs=29.7
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 109 DLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 109 dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
.|.|||+|..|.+.|..|++.|++|++++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 33 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQ 33 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 58999999999999999999999999998764
No 403
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=89.85 E-value=0.23 Score=48.96 Aligned_cols=31 Identities=23% Similarity=0.249 Sum_probs=28.9
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 109 DLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 109 dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
+|.|||+|-.|+.+|..|++ |++|++++++.
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 69999999999999999999 99999998864
No 404
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=89.79 E-value=0.21 Score=44.63 Aligned_cols=33 Identities=21% Similarity=0.232 Sum_probs=30.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEE-ECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGL-IGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~l-iE~~~ 140 (476)
.+|.|||+|-.|.+.|..|++.|++|++ ++++.
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~ 57 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAAQIPAIIANSRGP 57 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCG
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCH
Confidence 5899999999999999999999999999 77765
No 405
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=89.76 E-value=0.27 Score=49.33 Aligned_cols=34 Identities=15% Similarity=0.121 Sum_probs=30.9
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
...|+|||||..|...|..|.+.|.+|+|+++..
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~ 45 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEAGARLTVNALTF 45 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCC
Confidence 3579999999999999999999999999998753
No 406
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=89.68 E-value=0.32 Score=45.67 Aligned_cols=33 Identities=12% Similarity=0.215 Sum_probs=30.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCC-cEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGL-NVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~-~V~liE~~~ 140 (476)
..|+|||+|.+|.++|..|++.|. +|+|+.|..
T Consensus 142 ~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~ 175 (297)
T 2egg_A 142 KRILVIGAGGGARGIYFSLLSTAAERIDMANRTV 175 (297)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSH
T ss_pred CEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 479999999999999999999998 899998864
No 407
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=89.54 E-value=0.3 Score=43.04 Aligned_cols=32 Identities=25% Similarity=0.323 Sum_probs=29.6
Q ss_pred cEEEEC-CCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 109 DLVVIG-CGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 109 dVvIIG-gG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
.|+||| +|-.|...|..|++.|++|++++++.
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 589999 99999999999999999999998754
No 408
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=89.47 E-value=0.37 Score=45.92 Aligned_cols=34 Identities=12% Similarity=0.322 Sum_probs=30.3
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCC-cEEEECCCC
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGL-NVGLIGPDL 140 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~-~V~liE~~~ 140 (476)
...|+|||+|-.|..+|..|++.|+ +++|+|.+.
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~ 68 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 68 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCE
Confidence 3689999999999999999999998 588888765
No 409
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=89.37 E-value=0.35 Score=45.74 Aligned_cols=32 Identities=25% Similarity=0.367 Sum_probs=29.6
Q ss_pred cEEEECCCHHHHHHHHHHHHcCC--cEEEECCCC
Q 011835 109 DLVVIGCGPAGLALAAESAKLGL--NVGLIGPDL 140 (476)
Q Consensus 109 dVvIIGgG~aGl~~A~~La~~G~--~V~liE~~~ 140 (476)
+|+|||+|..|.++|..|+..|+ +++|+|...
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 35 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQDVAKEVVMVDIKD 35 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCSSEEEEECSST
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCch
Confidence 69999999999999999999998 899999865
No 410
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=89.34 E-value=0.4 Score=48.27 Aligned_cols=33 Identities=21% Similarity=0.292 Sum_probs=31.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
.+|.|||.|..|..+|..|++.|++|+++++..
T Consensus 5 ~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~ 37 (484)
T 4gwg_A 5 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 37 (484)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 589999999999999999999999999999865
No 411
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=89.29 E-value=0.36 Score=45.32 Aligned_cols=33 Identities=18% Similarity=0.320 Sum_probs=30.5
Q ss_pred ccEEEEC-CCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 108 LDLVVIG-CGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIG-gG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
..|.||| +|-.|.+.|..|++.|++|++++++.
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 3799999 99999999999999999999998765
No 412
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=89.29 E-value=0.35 Score=44.25 Aligned_cols=32 Identities=19% Similarity=0.283 Sum_probs=29.7
Q ss_pred cEEEECCCHHHHHHHHHHHHcC-CcEEEECCCC
Q 011835 109 DLVVIGCGPAGLALAAESAKLG-LNVGLIGPDL 140 (476)
Q Consensus 109 dVvIIGgG~aGl~~A~~La~~G-~~V~liE~~~ 140 (476)
.|.|||+|-.|...|..|++.| ++|++++++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~ 34 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGA 34 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCCH
Confidence 5899999999999999999999 9999998864
No 413
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=89.25 E-value=0.36 Score=45.45 Aligned_cols=34 Identities=21% Similarity=0.312 Sum_probs=29.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCC--cEEEECCCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGL--NVGLIGPDLP 141 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~--~V~liE~~~~ 141 (476)
.+|+|||+|..|...|+.|+..|+ +|.|+|.+..
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~ 50 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAKGIADRLVLLDLSEG 50 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC--
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcc
Confidence 589999999999999999999998 9999998653
No 414
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=89.20 E-value=0.44 Score=44.31 Aligned_cols=33 Identities=12% Similarity=0.220 Sum_probs=30.5
Q ss_pred ccEEEECC-CHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 108 LDLVVIGC-GPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGg-G~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
..|.|||+ |-.|...|..|++.|++|+++++..
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 47999999 9999999999999999999998754
No 415
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=89.05 E-value=0.42 Score=45.48 Aligned_cols=34 Identities=18% Similarity=0.340 Sum_probs=30.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCC--cEEEECCCC
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGL--NVGLIGPDL 140 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~--~V~liE~~~ 140 (476)
..+|+|||+|..|.++|..|+..|+ ++.|+|...
T Consensus 9 ~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 44 (326)
T 3vku_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFK 44 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 3589999999999999999999998 899998743
No 416
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=89.04 E-value=0.31 Score=48.93 Aligned_cols=36 Identities=17% Similarity=0.308 Sum_probs=31.8
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCC-cEEEECCCCC
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLGL-NVGLIGPDLP 141 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G~-~V~liE~~~~ 141 (476)
..+||+|||||++||++|+.|++.|+ +|+|+|+...
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~ 39 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDH 39 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCC
Confidence 34799999999999999999999999 8999998653
No 417
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=89.01 E-value=0.15 Score=46.07 Aligned_cols=32 Identities=16% Similarity=0.091 Sum_probs=29.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
..|+|+|+|..|..+|..|.+.|+ |+++|+++
T Consensus 10 ~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~ 41 (234)
T 2aef_A 10 RHVVICGWSESTLECLRELRGSEV-FVLAEDEN 41 (234)
T ss_dssp CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGG
T ss_pred CEEEEECCChHHHHHHHHHHhCCe-EEEEECCH
Confidence 479999999999999999999999 99999865
No 418
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=89.01 E-value=0.21 Score=48.40 Aligned_cols=32 Identities=31% Similarity=0.249 Sum_probs=30.1
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 109 DLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 109 dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
+|.|||+|..|.+.|..|++.|++|++++++.
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 79999999999999999999999999998854
No 419
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=88.94 E-value=0.48 Score=45.38 Aligned_cols=33 Identities=15% Similarity=0.077 Sum_probs=30.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
..|.|||.|..|.+.|..|++.|++|++++++.
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 479999999999999999999999999999865
No 420
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=88.90 E-value=0.38 Score=44.93 Aligned_cols=32 Identities=22% Similarity=0.176 Sum_probs=29.9
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 109 DLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 109 dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
.|.|||+|..|...|..|++.|++|++++++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~ 33 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFP 33 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSST
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 59999999999999999999999999998865
No 421
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=88.88 E-value=0.35 Score=45.21 Aligned_cols=33 Identities=18% Similarity=0.277 Sum_probs=30.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
..|.|||+|..|...|..|++.|++|.+++++.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 38 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNP 38 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 479999999999999999999999999998854
No 422
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=88.82 E-value=0.38 Score=45.44 Aligned_cols=32 Identities=25% Similarity=0.311 Sum_probs=29.5
Q ss_pred cEEEECCCHHHHHHHHHHHHcC--CcEEEECCCC
Q 011835 109 DLVVIGCGPAGLALAAESAKLG--LNVGLIGPDL 140 (476)
Q Consensus 109 dVvIIGgG~aGl~~A~~La~~G--~~V~liE~~~ 140 (476)
+|+|||+|-.|.++|..|++.| .+|+++|++.
T Consensus 3 kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 3 KIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 6999999999999999999999 6899999854
No 423
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=88.79 E-value=0.49 Score=43.25 Aligned_cols=34 Identities=32% Similarity=0.380 Sum_probs=30.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHcC----CcEEEECCCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLG----LNVGLIGPDLP 141 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G----~~V~liE~~~~ 141 (476)
..|.|||+|-.|.+.|..|++.| ++|+++++...
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKK 42 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCcc
Confidence 47999999999999999999999 79999988664
No 424
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=88.75 E-value=0.41 Score=44.35 Aligned_cols=33 Identities=27% Similarity=0.259 Sum_probs=30.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
..|+|||+|.+|.+.|..|.+.|.+|+++++..
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~ 162 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKEGAKVFLWNRTK 162 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSH
T ss_pred CEEEEECchHHHHHHHHHHHHcCCEEEEEECCH
Confidence 579999999999999999999999999998864
No 425
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=88.67 E-value=0.31 Score=45.17 Aligned_cols=33 Identities=15% Similarity=0.221 Sum_probs=30.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
..|+|+|+|.+|.++|..|++.|.+|+|+.|..
T Consensus 120 ~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~ 152 (272)
T 1p77_A 120 QHVLILGAGGATKGVLLPLLQAQQNIVLANRTF 152 (272)
T ss_dssp CEEEEECCSHHHHTTHHHHHHTTCEEEEEESSH
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 479999999999999999999999999998865
No 426
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=88.66 E-value=0.37 Score=44.67 Aligned_cols=34 Identities=18% Similarity=0.249 Sum_probs=30.9
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCC-cEEEECCCC
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGL-NVGLIGPDL 140 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~-~V~liE~~~ 140 (476)
...|+|+|+|.+|.++|..|++.|. +|+|+.|..
T Consensus 117 ~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 151 (277)
T 3don_A 117 DAYILILGAGGASKGIANELYKIVRPTLTVANRTM 151 (277)
T ss_dssp GCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCG
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 3579999999999999999999999 899998865
No 427
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=88.59 E-value=0.44 Score=44.14 Aligned_cols=32 Identities=16% Similarity=0.282 Sum_probs=29.6
Q ss_pred cEEEECCCHHHHHHHHHHHHcCC--cEEEECCCC
Q 011835 109 DLVVIGCGPAGLALAAESAKLGL--NVGLIGPDL 140 (476)
Q Consensus 109 dVvIIGgG~aGl~~A~~La~~G~--~V~liE~~~ 140 (476)
.|.|||+|..|.+.|..|++.|+ +|++++++.
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 36 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 69999999999999999999998 899998764
No 428
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=88.59 E-value=0.33 Score=46.02 Aligned_cols=33 Identities=15% Similarity=0.198 Sum_probs=30.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHcC-CcEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLG-LNVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G-~~V~liE~~~ 140 (476)
..|.|||.|..|...|..|++.| ++|++++++.
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 47999999999999999999999 9999999865
No 429
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=88.58 E-value=0.41 Score=42.91 Aligned_cols=34 Identities=18% Similarity=0.179 Sum_probs=30.8
Q ss_pred cccEEEECC-CHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 107 ILDLVVIGC-GPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 107 ~~dVvIIGg-G~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
...|+|.|| |-.|..++..|.+.|++|+++.|..
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CCeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 357999998 9999999999999999999998764
No 430
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=88.52 E-value=0.51 Score=45.95 Aligned_cols=38 Identities=24% Similarity=0.252 Sum_probs=33.6
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCC
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTN 144 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~ 144 (476)
...++|+|||..|.++|..++..|++|+|+|.+..+.+
T Consensus 204 ~~rL~IfGAGhva~ala~~a~~lg~~V~v~D~R~~~~~ 241 (386)
T 2we8_A 204 RPRMLVFGAIDFAAAVAQQGAFLGYRVTVCDARPVFAT 241 (386)
T ss_dssp CCEEEEECCSTHHHHHHHHHHHTTCEEEEEESCTTTSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEECCchhhcc
Confidence 35899999999999999999999999999997765543
No 431
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=88.51 E-value=0.41 Score=48.28 Aligned_cols=34 Identities=21% Similarity=0.254 Sum_probs=31.3
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
+.+|.|||.|..|..+|..|++.|++|+++++..
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~ 48 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSR 48 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred CCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 4589999999999999999999999999998864
No 432
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=88.49 E-value=0.37 Score=47.35 Aligned_cols=34 Identities=26% Similarity=0.215 Sum_probs=31.1
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
...|+|||.|+.|..+|..|...|.+|+++|+++
T Consensus 220 GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp 253 (435)
T 3gvp_A 220 GKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDP 253 (435)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 3579999999999999999999999999999864
No 433
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=88.49 E-value=0.5 Score=43.98 Aligned_cols=34 Identities=24% Similarity=0.342 Sum_probs=30.3
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCC-cEEEECCCC
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGL-NVGLIGPDL 140 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~-~V~liE~~~ 140 (476)
...|+|+|+|-+|.++|..|++.|. +|+|+.|..
T Consensus 127 ~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~ 161 (283)
T 3jyo_A 127 LDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDT 161 (283)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCH
Confidence 3579999999999999999999999 699998864
No 434
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=88.48 E-value=0.47 Score=45.00 Aligned_cols=34 Identities=24% Similarity=0.291 Sum_probs=29.9
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCC--cEEEECCCC
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGL--NVGLIGPDL 140 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~--~V~liE~~~ 140 (476)
..+|+|||+|-.|.++|+.|+..|+ .+.|+|.+.
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~ 41 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDT 41 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 3689999999999999999999985 799998753
No 435
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=88.38 E-value=0.37 Score=47.69 Aligned_cols=33 Identities=30% Similarity=0.324 Sum_probs=31.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
.++.|||.|-.|+.+|..|++.|++|+++|++.
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~ 44 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQ 44 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CccEEEeeCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 479999999999999999999999999999865
No 436
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=88.31 E-value=0.48 Score=43.32 Aligned_cols=32 Identities=22% Similarity=0.448 Sum_probs=29.9
Q ss_pred cEEEECCCHHHHHHHHHHHHcCC-cEEEECCCC
Q 011835 109 DLVVIGCGPAGLALAAESAKLGL-NVGLIGPDL 140 (476)
Q Consensus 109 dVvIIGgG~aGl~~A~~La~~G~-~V~liE~~~ 140 (476)
.|+|||+|-+|-+++..|.+.|. +|+|+.|..
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~ 142 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTI 142 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCH
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 89999999999999999999998 899998864
No 437
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=88.29 E-value=0.49 Score=47.74 Aligned_cols=33 Identities=21% Similarity=0.292 Sum_probs=30.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
.+|.|||.|..|...|..|++.|++|+++++..
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~ 35 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 35 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 479999999999999999999999999998864
No 438
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=88.29 E-value=0.45 Score=47.94 Aligned_cols=33 Identities=21% Similarity=0.276 Sum_probs=30.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
..|+|||.|..|..+|..|...|.+|+++|+++
T Consensus 275 ktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~ 307 (494)
T 3ce6_A 275 KKVLICGYGDVGKGCAEAMKGQGARVSVTEIDP 307 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 479999999999999999999999999999865
No 439
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=88.16 E-value=0.47 Score=44.53 Aligned_cols=34 Identities=29% Similarity=0.377 Sum_probs=31.0
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
...|.|||+|..|..+|..|...|.+|+++++..
T Consensus 157 g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 157 GSQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 3579999999999999999999999999998854
No 440
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=88.15 E-value=0.51 Score=41.55 Aligned_cols=32 Identities=28% Similarity=0.399 Sum_probs=29.4
Q ss_pred cEEEECC-CHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 109 DLVVIGC-GPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 109 dVvIIGg-G~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
.|+|+|| |..|..++..|.+.|++|+++.|..
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 5999996 9999999999999999999998864
No 441
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=88.13 E-value=0.48 Score=44.33 Aligned_cols=34 Identities=26% Similarity=0.393 Sum_probs=31.0
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
...|.|||.|..|..+|..|...|.+|+++++..
T Consensus 155 g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 155 GANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 3579999999999999999999999999998854
No 442
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=88.13 E-value=0.48 Score=44.80 Aligned_cols=34 Identities=18% Similarity=0.286 Sum_probs=30.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCC-cEEEECCCC
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGL-NVGLIGPDL 140 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~-~V~liE~~~ 140 (476)
...++|+|+|-+|.++|..|++.|. +|+|+.|..
T Consensus 154 gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~ 188 (315)
T 3tnl_A 154 GKKMTICGAGGAATAICIQAALDGVKEISIFNRKD 188 (315)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSS
T ss_pred CCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCC
Confidence 3579999999999999999999999 799998863
No 443
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=88.09 E-value=0.51 Score=47.78 Aligned_cols=33 Identities=24% Similarity=0.277 Sum_probs=31.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
..|.|||.|..|..+|..|++.|++|+++++..
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~ 43 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQ 43 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 579999999999999999999999999998865
No 444
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=87.92 E-value=0.53 Score=43.19 Aligned_cols=33 Identities=24% Similarity=0.324 Sum_probs=30.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCc-EEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLN-VGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~-V~liE~~~ 140 (476)
..|.|||+|-.|...|..|++.|++ |.+++++.
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~ 44 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTE 44 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSH
T ss_pred CeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCH
Confidence 5799999999999999999999999 88998754
No 445
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=87.91 E-value=0.42 Score=50.84 Aligned_cols=33 Identities=21% Similarity=0.168 Sum_probs=31.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
..|.|||+|..|...|..|++.|++|+++|++.
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 345 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNYPVILKEVNE 345 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCH
Confidence 479999999999999999999999999999865
No 446
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=87.90 E-value=0.37 Score=48.60 Aligned_cols=33 Identities=21% Similarity=0.267 Sum_probs=30.2
Q ss_pred ccEEEECCCHHHHHHHHHHHHc--CCcEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKL--GLNVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~--G~~V~liE~~~ 140 (476)
.+|.|||.|-.|+.+|..|++. |++|+++|++.
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 4799999999999999999999 79999998754
No 447
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=87.87 E-value=0.42 Score=44.38 Aligned_cols=31 Identities=19% Similarity=0.335 Sum_probs=28.9
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 109 DLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 109 dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
.|.|||+|..|...|..|++ |++|++++++.
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~ 33 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTF 33 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TSCEEEECSST
T ss_pred eEEEEcccHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 69999999999999999999 99999998865
No 448
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=87.84 E-value=0.52 Score=47.52 Aligned_cols=32 Identities=31% Similarity=0.474 Sum_probs=30.1
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 109 DLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 109 dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
+|.|||+|..|...|..|++.|++|+++++..
T Consensus 3 kIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~ 34 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEKGFKVAVFNRTY 34 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred EEEEEChHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 79999999999999999999999999998854
No 449
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=87.83 E-value=0.45 Score=45.87 Aligned_cols=33 Identities=30% Similarity=0.539 Sum_probs=30.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCC-cEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGL-NVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~-~V~liE~~~ 140 (476)
..|+|||+|..|..+|..|++.|. +++|+|.+.
T Consensus 119 ~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~ 152 (353)
T 3h5n_A 119 AKVVILGCGGIGNHVSVILATSGIGEIILIDNDQ 152 (353)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCB
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCc
Confidence 589999999999999999999998 688888765
No 450
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=87.82 E-value=0.59 Score=43.18 Aligned_cols=34 Identities=26% Similarity=0.441 Sum_probs=30.8
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLP 141 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~ 141 (476)
..|+|.|+|..|..++..|.+.|++|+++.+...
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 37 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQ 37 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 4799999999999999999999999999987643
No 451
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=87.82 E-value=0.61 Score=44.43 Aligned_cols=35 Identities=23% Similarity=0.274 Sum_probs=30.8
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCC--cEEEECCCC
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLGL--NVGLIGPDL 140 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G~--~V~liE~~~ 140 (476)
...+|+|||+|..|.++|+.|+..|+ +++|+|...
T Consensus 18 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~ 54 (331)
T 4aj2_A 18 PQNKITVVGVGAVGMACAISILMKDLADELALVDVIE 54 (331)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCCh
Confidence 34689999999999999999999998 899998743
No 452
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=87.80 E-value=0.56 Score=44.42 Aligned_cols=33 Identities=27% Similarity=0.402 Sum_probs=29.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCC--cEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGL--NVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~--~V~liE~~~ 140 (476)
.+|+|||+|..|.++|+.|+..|+ +|.++|.+.
T Consensus 7 ~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~ 41 (316)
T 1ldn_A 7 ARVVVIGAGFVGASYVFALMNQGIADEIVLIDANE 41 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCc
Confidence 589999999999999999999886 799998754
No 453
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=87.70 E-value=0.4 Score=46.62 Aligned_cols=34 Identities=18% Similarity=0.144 Sum_probs=30.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHcC-------CcEEEECCCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLG-------LNVGLIGPDLP 141 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G-------~~V~liE~~~~ 141 (476)
..|.|||+|-.|.+.|..|++.| ++|++++++..
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 37999999999999999999999 99999988653
No 454
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=87.65 E-value=0.47 Score=44.39 Aligned_cols=33 Identities=24% Similarity=0.259 Sum_probs=30.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
..|.|||+|-.|...|..|++.|++|+++++..
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 37 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGVTVYAFDLME 37 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 479999999999999999999999999998754
No 455
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=87.63 E-value=0.46 Score=47.74 Aligned_cols=33 Identities=18% Similarity=0.284 Sum_probs=30.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHc--CCcEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKL--GLNVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~--G~~V~liE~~~ 140 (476)
.+|.|||.|-.|+..|..|++. |++|++++++.
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~ 40 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNE 40 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 4799999999999999999999 89999998854
No 456
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=87.63 E-value=0.55 Score=41.51 Aligned_cols=32 Identities=34% Similarity=0.483 Sum_probs=29.4
Q ss_pred cEEEECC-CHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 109 DLVVIGC-GPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 109 dVvIIGg-G~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
.|+|.|| |..|..++..|.+.|++|+++.|..
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecc
Confidence 5999998 9999999999999999999998754
No 457
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=87.63 E-value=0.58 Score=48.23 Aligned_cols=37 Identities=24% Similarity=0.126 Sum_probs=33.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTN 144 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~ 144 (476)
..|+|+|+|..|..+|..|.+.|++|+++|+++...+
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~~~~ 385 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQESPVC 385 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCSSC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChHHHh
Confidence 5899999999999999999999999999998775443
No 458
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=87.62 E-value=0.32 Score=47.87 Aligned_cols=30 Identities=23% Similarity=0.379 Sum_probs=27.9
Q ss_pred ccEEEECCCHHHHHHHHHHHH-cCCcEEEEC
Q 011835 108 LDLVVIGCGPAGLALAAESAK-LGLNVGLIG 137 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~-~G~~V~liE 137 (476)
.+|.|||+|..|.+.|..|++ .|++|++++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 379999999999999999998 599999998
No 459
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=87.61 E-value=0.63 Score=43.00 Aligned_cols=34 Identities=15% Similarity=0.172 Sum_probs=30.3
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCC-cEEEECCCC
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGL-NVGLIGPDL 140 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~-~V~liE~~~ 140 (476)
...++|+|+|-+|.++|..|++.|. +|+|+.|..
T Consensus 120 ~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~ 154 (272)
T 3pwz_A 120 NRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDM 154 (272)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 3579999999999999999999996 899998754
No 460
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=87.40 E-value=0.58 Score=44.40 Aligned_cols=33 Identities=27% Similarity=0.426 Sum_probs=30.5
Q ss_pred ccEEEECCCHHHHHHHHHHHHcC----CcEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLG----LNVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G----~~V~liE~~~ 140 (476)
.+|.|||+|-.|.+.|..|++.| ++|+++++..
T Consensus 23 mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 23 MSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp CCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCc
Confidence 57999999999999999999999 7999998865
No 461
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=87.37 E-value=0.55 Score=45.12 Aligned_cols=33 Identities=12% Similarity=0.278 Sum_probs=30.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCC-cEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGL-NVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~-~V~liE~~~ 140 (476)
..|+|||+|..|..+|..|++.|+ +++|+|.+.
T Consensus 37 ~~VlivG~GGlG~~ia~~La~~Gvg~itlvD~d~ 70 (346)
T 1y8q_A 37 SRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQ 70 (346)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCCEEEEEECCC
Confidence 589999999999999999999998 689998754
No 462
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=87.33 E-value=0.67 Score=44.32 Aligned_cols=33 Identities=24% Similarity=0.266 Sum_probs=30.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
..|.|||+|-.|.+.|..|++.|++|+++++..
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~ 49 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSG 49 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CEEEEECchHHHHHHHHHHHHCcCEEEEEECCh
Confidence 469999999999999999999999999998765
No 463
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=87.25 E-value=1.2 Score=46.47 Aligned_cols=39 Identities=23% Similarity=0.317 Sum_probs=34.7
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCCC
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFTN 144 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~~ 144 (476)
..|||+|||+|..|..+|..|++.|.+|++||++...+.
T Consensus 7 ~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg 45 (650)
T 1vg0_A 7 SDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGG 45 (650)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCG
T ss_pred CcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccC
Confidence 369999999999999999999999999999999775543
No 464
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=87.14 E-value=0.72 Score=42.80 Aligned_cols=33 Identities=15% Similarity=0.241 Sum_probs=30.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCC---cEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGL---NVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~---~V~liE~~~ 140 (476)
..|.|||+|-.|.+.|..|.+.|+ +|++++++.
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL 39 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH
Confidence 479999999999999999999999 999999866
No 465
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=87.12 E-value=0.66 Score=42.58 Aligned_cols=32 Identities=31% Similarity=0.363 Sum_probs=29.9
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 109 DLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 109 dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
.|+|||+|-+|.+.|..|.+.|.+|+++++..
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~ 149 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRTP 149 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 79999999999999999999999999998854
No 466
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=87.12 E-value=0.52 Score=43.14 Aligned_cols=30 Identities=23% Similarity=0.205 Sum_probs=28.0
Q ss_pred cEEEECCCHHHHHHHHHHHHcCCcEEEECC
Q 011835 109 DLVVIGCGPAGLALAAESAKLGLNVGLIGP 138 (476)
Q Consensus 109 dVvIIGgG~aGl~~A~~La~~G~~V~liE~ 138 (476)
.|.|||+|-.|...|..|++.|++|+++++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHCCCeEEEeCC
Confidence 589999999999999999999999999866
No 467
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=87.11 E-value=0.38 Score=46.24 Aligned_cols=34 Identities=18% Similarity=0.135 Sum_probs=31.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHcC-------CcEEEECCCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLG-------LNVGLIGPDLP 141 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G-------~~V~liE~~~~ 141 (476)
..|.|||+|-.|.+.|..|++.| ++|++++++..
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 47999999999999999999999 89999988654
No 468
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=87.11 E-value=0.87 Score=44.25 Aligned_cols=34 Identities=26% Similarity=0.433 Sum_probs=30.8
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
...|+|||+|..|..+|.++.+.|++|++++...
T Consensus 12 ~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~ 45 (377)
T 3orq_A 12 GATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSE 45 (377)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCC
Confidence 3579999999999999999999999999998654
No 469
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=87.03 E-value=0.5 Score=43.15 Aligned_cols=33 Identities=18% Similarity=0.287 Sum_probs=30.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
..|.|||+|-.|...|..|.+.|++|.+++++.
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~ 36 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSSL 36 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEEEECSSH
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEECCCH
Confidence 479999999999999999999999999998754
No 470
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=87.01 E-value=0.54 Score=43.67 Aligned_cols=34 Identities=18% Similarity=0.039 Sum_probs=30.5
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCC-cEEEECCCC
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGL-NVGLIGPDL 140 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~-~V~liE~~~ 140 (476)
...++|+|+|-+|-++|..|++.|. +|+|+.|..
T Consensus 122 ~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~ 156 (282)
T 3fbt_A 122 NNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNP 156 (282)
T ss_dssp TSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCH
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 3579999999999999999999998 899998754
No 471
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=86.77 E-value=0.74 Score=41.72 Aligned_cols=33 Identities=18% Similarity=0.339 Sum_probs=30.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCC----cEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGL----NVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~----~V~liE~~~ 140 (476)
..|.|||+|-.|.+.|..|.+.|+ +|.+++++.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~ 39 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNT 39 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCH
Confidence 369999999999999999999998 999999865
No 472
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=86.75 E-value=0.73 Score=43.85 Aligned_cols=35 Identities=17% Similarity=0.331 Sum_probs=30.4
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCC--cEEEECCCC
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLGL--NVGLIGPDL 140 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G~--~V~liE~~~ 140 (476)
...+|+|||+|-.|.++|+.|+..++ ++.|+|.+.
T Consensus 8 ~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~~ 44 (326)
T 2zqz_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFK 44 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCc
Confidence 34689999999999999999999886 799998743
No 473
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=86.68 E-value=0.76 Score=43.99 Aligned_cols=34 Identities=29% Similarity=0.409 Sum_probs=29.7
Q ss_pred cccEEEECC-CHHHHHHHHHHHHcCC--cEEEECCCC
Q 011835 107 ILDLVVIGC-GPAGLALAAESAKLGL--NVGLIGPDL 140 (476)
Q Consensus 107 ~~dVvIIGg-G~aGl~~A~~La~~G~--~V~liE~~~ 140 (476)
..+|+|||+ |-.|.++|+.++..|+ +|+|+|...
T Consensus 8 ~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~ 44 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFA 44 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCH
T ss_pred CCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCc
Confidence 358999998 9999999999999995 799998743
No 474
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=86.65 E-value=0.72 Score=44.53 Aligned_cols=32 Identities=22% Similarity=0.255 Sum_probs=29.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPD 139 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~ 139 (476)
..|+|+|.|..|..+|..|.+.|.+|++.|++
T Consensus 174 ktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~ 205 (364)
T 1leh_A 174 LAVSVQGLGNVAKALCKKLNTEGAKLVVTDVN 205 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEEEEcCC
Confidence 57999999999999999999999999998864
No 475
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=86.65 E-value=0.66 Score=43.77 Aligned_cols=34 Identities=26% Similarity=0.389 Sum_probs=30.4
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCC-cEEEECCCC
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGL-NVGLIGPDL 140 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~-~V~liE~~~ 140 (476)
...++|+|+|-+|.++|..|++.|. +|+|+.|..
T Consensus 148 gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~ 182 (312)
T 3t4e_A 148 GKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKD 182 (312)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSS
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCC
Confidence 3579999999999999999999998 799998864
No 476
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=86.63 E-value=0.67 Score=43.70 Aligned_cols=32 Identities=25% Similarity=0.366 Sum_probs=28.9
Q ss_pred cEEEECCCHHHHHHHHHHHHcCC-cEEEECCCC
Q 011835 109 DLVVIGCGPAGLALAAESAKLGL-NVGLIGPDL 140 (476)
Q Consensus 109 dVvIIGgG~aGl~~A~~La~~G~-~V~liE~~~ 140 (476)
+|+|||+|..|.++|+.|+..|+ ++.|+|.+.
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~ 33 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTP 33 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSST
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCCh
Confidence 48999999999999999999998 599999764
No 477
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=86.52 E-value=0.51 Score=50.08 Aligned_cols=33 Identities=24% Similarity=0.254 Sum_probs=30.9
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
..|.|||+|..|...|..|++.|++|+++|++.
T Consensus 315 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 347 (715)
T 1wdk_A 315 KQAAVLGAGIMGGGIAYQSASKGTPILMKDINE 347 (715)
T ss_dssp SSEEEECCHHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CEEEEECCChhhHHHHHHHHhCCCEEEEEECCH
Confidence 479999999999999999999999999999865
No 478
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=86.52 E-value=0.48 Score=44.21 Aligned_cols=32 Identities=31% Similarity=0.366 Sum_probs=29.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
..|+|+|+|-+|.++|..|++.| +|+++++..
T Consensus 129 k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~ 160 (287)
T 1nvt_A 129 KNIVIYGAGGAARAVAFELAKDN-NIIIANRTV 160 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHTSSS-EEEEECSSH
T ss_pred CEEEEECchHHHHHHHHHHHHCC-CEEEEECCH
Confidence 46999999999999999999999 999998754
No 479
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=86.49 E-value=0.59 Score=45.96 Aligned_cols=33 Identities=21% Similarity=0.340 Sum_probs=30.0
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCC-cEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGL-NVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~-~V~liE~~~ 140 (476)
..|+|||+|..|..+|..|...|. +|+++++..
T Consensus 168 ~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~ 201 (404)
T 1gpj_A 168 KTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTY 201 (404)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSH
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 479999999999999999999999 899998754
No 480
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=86.47 E-value=0.73 Score=44.78 Aligned_cols=34 Identities=21% Similarity=0.245 Sum_probs=30.8
Q ss_pred cccEEEECC-CHHHHHHHHHHHHcCC---cEEEECCCC
Q 011835 107 ILDLVVIGC-GPAGLALAAESAKLGL---NVGLIGPDL 140 (476)
Q Consensus 107 ~~dVvIIGg-G~aGl~~A~~La~~G~---~V~liE~~~ 140 (476)
...|+|||| |.+|+.|+..+...|+ .|+++|...
T Consensus 214 ~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~ 251 (394)
T 2qrj_A 214 KPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKE 251 (394)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHH
T ss_pred CCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeeccc
Confidence 578999999 9999999999999998 899997643
No 481
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=86.46 E-value=0.64 Score=43.21 Aligned_cols=34 Identities=12% Similarity=0.155 Sum_probs=30.3
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCC-cEEEECCCC
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGL-NVGLIGPDL 140 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~-~V~liE~~~ 140 (476)
...++|+|+|-+|.++|..|++.|. +|+|+.|..
T Consensus 126 ~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 160 (281)
T 3o8q_A 126 GATILLIGAGGAARGVLKPLLDQQPASITVTNRTF 160 (281)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSH
T ss_pred CCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCH
Confidence 3579999999999999999999997 899998754
No 482
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=86.43 E-value=0.92 Score=44.80 Aligned_cols=34 Identities=24% Similarity=0.369 Sum_probs=30.7
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
...|+|+|+|..|..++.++.+.|++|++++..+
T Consensus 35 ~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~~ 68 (419)
T 4e4t_A 35 GAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDP 68 (419)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 3579999999999999999999999999998654
No 483
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=86.32 E-value=0.78 Score=44.73 Aligned_cols=33 Identities=21% Similarity=0.485 Sum_probs=30.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
..|+|||+|..|..+|.++.+.|++|++++...
T Consensus 15 k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~ 47 (389)
T 3q2o_A 15 KTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTK 47 (389)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESST
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCC
Confidence 479999999999999999999999999998643
No 484
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=86.30 E-value=0.7 Score=47.48 Aligned_cols=34 Identities=12% Similarity=0.322 Sum_probs=30.5
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCC-cEEEECCCC
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGL-NVGLIGPDL 140 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~-~V~liE~~~ 140 (476)
...|+|||+|-.|..+|..|++.|+ +++|+|.+.
T Consensus 326 ~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~ 360 (615)
T 4gsl_A 326 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 360 (615)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCC
Confidence 4689999999999999999999998 588888765
No 485
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=86.29 E-value=0.45 Score=44.34 Aligned_cols=32 Identities=25% Similarity=0.274 Sum_probs=29.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
..|.|||+|..|...|..|++.|++|++++ +.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~ 35 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLARAGHQLHVTT-IG 35 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SS
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CH
Confidence 479999999999999999999999999998 54
No 486
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=86.19 E-value=0.79 Score=46.09 Aligned_cols=33 Identities=21% Similarity=0.288 Sum_probs=30.7
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
.+|.|||.|..|...|..|++.|++|+++++..
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~ 38 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESRGYTVAIYNRTT 38 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 579999999999999999999999999998854
No 487
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=86.10 E-value=0.78 Score=43.49 Aligned_cols=34 Identities=21% Similarity=0.297 Sum_probs=30.0
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCC--cEEEECCCC
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGL--NVGLIGPDL 140 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~--~V~liE~~~ 140 (476)
..+|+|||+|-.|.++|+.|+..++ ++.|+|.+.
T Consensus 5 ~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~ 40 (318)
T 1ez4_A 5 HQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVK 40 (318)
T ss_dssp BCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCc
Confidence 3689999999999999999999987 799998743
No 488
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=86.02 E-value=0.7 Score=42.67 Aligned_cols=33 Identities=18% Similarity=0.333 Sum_probs=30.1
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCC-cEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGL-NVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~-~V~liE~~~ 140 (476)
..|+|||+|-+|-++|..|++.|. +|+|+.|..
T Consensus 120 ~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~ 153 (271)
T 1npy_A 120 AKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNV 153 (271)
T ss_dssp SCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCH
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 479999999999999999999997 799998864
No 489
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=86.01 E-value=0.7 Score=43.02 Aligned_cols=33 Identities=39% Similarity=0.463 Sum_probs=29.9
Q ss_pred ccEEEEC-CCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 108 LDLVVIG-CGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIG-gG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
..++|+| +|.+|.++|..|++.|.+|+++.|..
T Consensus 120 k~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~ 153 (287)
T 1lu9_A 120 KKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKL 153 (287)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCH
Confidence 4699999 89999999999999999999998754
No 490
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=85.96 E-value=0.66 Score=47.58 Aligned_cols=34 Identities=12% Similarity=0.322 Sum_probs=30.5
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCC-cEEEECCCC
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGL-NVGLIGPDL 140 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~-~V~liE~~~ 140 (476)
...|+|||+|-.|..+|..|++.|+ +++|+|.+.
T Consensus 327 ~~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D~ 361 (598)
T 3vh1_A 327 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 361 (598)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCCEEEEECCSB
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 3689999999999999999999998 588998764
No 491
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=85.69 E-value=0.58 Score=44.63 Aligned_cols=33 Identities=18% Similarity=0.183 Sum_probs=29.5
Q ss_pred cccEEEECC-CHHHHHHHHHHHHcCC-------cEEEECCC
Q 011835 107 ILDLVVIGC-GPAGLALAAESAKLGL-------NVGLIGPD 139 (476)
Q Consensus 107 ~~dVvIIGg-G~aGl~~A~~La~~G~-------~V~liE~~ 139 (476)
..+|+|+|| |-.|.+++..|...|+ +|.++|..
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~ 45 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIP 45 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCS
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCC
Confidence 368999998 9999999999999886 79999876
No 492
>3on5_A BH1974 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, oxidoreductase; 2.80A {Bacillus halodurans}
Probab=85.33 E-value=0.49 Score=45.53 Aligned_cols=37 Identities=16% Similarity=0.190 Sum_probs=32.9
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEECCCCCCC
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDLPFT 143 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~~~~ 143 (476)
...++|+|||+.+.++|..++..|++|+|+|.+..+.
T Consensus 199 ~~~L~I~GaGhva~aLa~la~~lgf~V~v~D~R~~~~ 235 (362)
T 3on5_A 199 KERLIIFGAGPDVPPLVTFASNVGFYTVVTDWRPNQC 235 (362)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHHTEEEEEEESCGGGG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEECCCcccc
Confidence 3589999999999999999999999999998776543
No 493
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=85.32 E-value=0.64 Score=42.88 Aligned_cols=33 Identities=18% Similarity=0.113 Sum_probs=30.5
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
..|+|.|+|..|..++..|.+.|++|+++.|..
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred CcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 479999999999999999999999999998765
No 494
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=85.29 E-value=0.88 Score=43.58 Aligned_cols=33 Identities=18% Similarity=0.254 Sum_probs=29.4
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
-.|+|+|+|+.|++++..+...|.+|+++++..
T Consensus 178 ~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~ 210 (348)
T 3two_A 178 TKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNE 210 (348)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 369999999999999999999999999998654
No 495
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=85.21 E-value=0.84 Score=42.45 Aligned_cols=33 Identities=27% Similarity=0.246 Sum_probs=30.1
Q ss_pred cEEEECC-CHHHHHHHHHHHHcCCcEEEECCCCC
Q 011835 109 DLVVIGC-GPAGLALAAESAKLGLNVGLIGPDLP 141 (476)
Q Consensus 109 dVvIIGg-G~aGl~~A~~La~~G~~V~liE~~~~ 141 (476)
+|+|.|| |..|..++..|.++|++|+++-|++.
T Consensus 2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~ 35 (298)
T 4b4o_A 2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPG 35 (298)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 6999999 99999999999999999999977643
No 496
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=85.07 E-value=0.85 Score=39.48 Aligned_cols=33 Identities=24% Similarity=0.472 Sum_probs=30.1
Q ss_pred ccEEEECC-CHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 108 LDLVVIGC-GPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGg-G~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
..|+|+|| |..|..++..|.+.|++|+++.|..
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh
Confidence 36999999 9999999999999999999998764
No 497
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=85.01 E-value=0.74 Score=45.42 Aligned_cols=33 Identities=30% Similarity=0.243 Sum_probs=30.6
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
..|+|||.|..|..+|..|...|.+|+++|+++
T Consensus 248 KTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp 280 (464)
T 3n58_A 248 KVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDP 280 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 479999999999999999999999999998755
No 498
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=84.92 E-value=0.92 Score=44.67 Aligned_cols=34 Identities=26% Similarity=0.197 Sum_probs=31.2
Q ss_pred cccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 107 ILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 107 ~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
...|+|||.|..|..+|..|...|.+|+++|+++
T Consensus 211 GktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p 244 (436)
T 3h9u_A 211 GKTACVCGYGDVGKGCAAALRGFGARVVVTEVDP 244 (436)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCh
Confidence 3579999999999999999999999999999855
No 499
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=84.83 E-value=0.92 Score=44.13 Aligned_cols=35 Identities=23% Similarity=0.393 Sum_probs=30.9
Q ss_pred CcccEEEECCCHHHHHHHHHHHHcCCcEEEECCCC
Q 011835 106 GILDLVVIGCGPAGLALAAESAKLGLNVGLIGPDL 140 (476)
Q Consensus 106 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~liE~~~ 140 (476)
....|+|+|+|..|...+..+.+.|++|++++..+
T Consensus 10 ~~~~ili~g~g~~~~~~~~a~~~~G~~v~~~~~~~ 44 (391)
T 1kjq_A 10 AATRVMLLGSGELGKEVAIECQRLGVEVIAVDRYA 44 (391)
T ss_dssp TCCEEEEESCSHHHHHHHHHHHTTTCEEEEEESST
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEECCC
Confidence 34689999999999999999999999999997643
No 500
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=84.79 E-value=0.9 Score=44.10 Aligned_cols=33 Identities=27% Similarity=0.385 Sum_probs=29.3
Q ss_pred ccEEEECCCHHHHHHHHHHHHcCC-cEEEECCCC
Q 011835 108 LDLVVIGCGPAGLALAAESAKLGL-NVGLIGPDL 140 (476)
Q Consensus 108 ~dVvIIGgG~aGl~~A~~La~~G~-~V~liE~~~ 140 (476)
-.|+|+|+|+.|++++..++..|. +|++++...
T Consensus 195 ~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~ 228 (378)
T 3uko_A 195 SNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDS 228 (378)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCT
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCH
Confidence 369999999999999999999999 799998655
Done!