Query 011840
Match_columns 476
No_of_seqs 255 out of 1660
Neff 7.1
Searched_HMMs 29240
Date Mon Mar 25 16:23:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011840.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011840hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3s40_A Diacylglycerol kinase; 100.0 1.3E-44 4.5E-49 363.5 25.2 285 78-475 6-298 (304)
2 2qv7_A Diacylglycerol kinase D 100.0 4.1E-40 1.4E-44 335.2 27.1 283 80-474 24-315 (337)
3 2bon_A Lipid kinase; DAG kinas 100.0 1.1E-39 3.7E-44 331.6 21.1 283 79-474 28-316 (332)
4 2an1_A Putative kinase; struct 99.4 6E-12 2E-16 124.9 16.0 113 80-222 5-121 (292)
5 1yt5_A Inorganic polyphosphate 99.2 6.7E-11 2.3E-15 115.5 11.2 97 82-222 2-98 (258)
6 2i2c_A Probable inorganic poly 99.2 2.3E-10 7.9E-15 112.5 14.7 94 81-222 1-95 (272)
7 1u0t_A Inorganic polyphosphate 99.2 4.8E-10 1.6E-14 112.2 17.1 112 80-214 4-129 (307)
8 3afo_A NADH kinase POS5; alpha 97.4 0.00061 2.1E-08 69.9 10.0 124 79-230 40-181 (388)
9 1z0s_A Probable inorganic poly 95.8 0.036 1.2E-06 54.1 9.8 93 81-215 30-122 (278)
10 3pfn_A NAD kinase; structural 94.4 0.4 1.4E-05 48.5 12.9 125 79-231 37-175 (365)
11 1o2d_A Alcohol dehydrogenase, 83.2 7.2 0.00025 39.1 11.1 101 81-193 41-157 (371)
12 3jzd_A Iron-containing alcohol 81.5 3.5 0.00012 41.3 8.0 85 81-186 37-121 (358)
13 3hl0_A Maleylacetate reductase 80.7 4.1 0.00014 40.7 8.2 84 81-186 35-119 (353)
14 4grd_A N5-CAIR mutase, phospho 72.7 25 0.00086 31.4 10.0 85 81-187 13-99 (173)
15 1oj7_A Hypothetical oxidoreduc 71.8 8.5 0.00029 39.1 7.8 102 81-194 51-169 (408)
16 3uhj_A Probable glycerol dehyd 70.4 8.8 0.0003 38.8 7.4 85 81-186 53-138 (387)
17 3iv7_A Alcohol dehydrogenase I 70.0 4.7 0.00016 40.5 5.3 83 81-186 38-120 (364)
18 3bfj_A 1,3-propanediol oxidore 69.9 10 0.00035 38.1 7.8 101 81-193 34-151 (387)
19 1vlj_A NADH-dependent butanol 67.7 18 0.0006 36.7 9.1 100 81-193 44-160 (407)
20 1sg6_A Pentafunctional AROM po 65.6 5.8 0.0002 40.2 4.9 102 80-193 36-148 (393)
21 2gru_A 2-deoxy-scyllo-inosose 62.7 9.2 0.00032 38.3 5.8 95 80-186 34-128 (368)
22 1xmp_A PURE, phosphoribosylami 57.8 46 0.0016 29.6 8.7 77 80-168 10-88 (170)
23 3ox4_A Alcohol dehydrogenase 2 57.3 34 0.0012 34.3 8.9 101 80-193 31-147 (383)
24 3okf_A 3-dehydroquinate syntha 56.8 20 0.0007 36.2 7.1 95 79-186 61-157 (390)
25 3oow_A Phosphoribosylaminoimid 54.8 1.1E+02 0.0037 27.1 10.5 63 97-168 18-82 (166)
26 1jq5_A Glycerol dehydrogenase; 54.4 23 0.00079 35.2 7.0 85 81-186 32-118 (370)
27 3kuu_A Phosphoribosylaminoimid 54.2 78 0.0027 28.3 9.5 75 82-169 14-90 (174)
28 3ce9_A Glycerol dehydrogenase; 53.6 20 0.00069 35.4 6.4 84 81-186 35-120 (354)
29 3ors_A N5-carboxyaminoimidazol 52.3 74 0.0025 28.1 9.0 75 82-169 5-81 (163)
30 1o4v_A Phosphoribosylaminoimid 50.6 73 0.0025 28.7 8.9 78 81-169 13-91 (183)
31 3rg8_A Phosphoribosylaminoimid 49.9 1E+02 0.0035 27.1 9.5 65 97-169 15-81 (159)
32 1ta9_A Glycerol dehydrogenase; 49.8 39 0.0013 34.7 8.0 88 81-190 92-183 (450)
33 3lp6_A Phosphoribosylaminoimid 48.7 70 0.0024 28.6 8.3 76 82-169 9-85 (174)
34 3qbe_A 3-dehydroquinate syntha 47.7 25 0.00087 35.2 6.0 93 81-186 44-137 (368)
35 1rrm_A Lactaldehyde reductase; 47.3 35 0.0012 34.1 7.1 98 81-192 32-148 (386)
36 3clh_A 3-dehydroquinate syntha 47.2 30 0.001 34.1 6.4 92 80-187 26-120 (343)
37 1u11_A PURE (N5-carboxyaminoim 46.0 1E+02 0.0034 27.8 9.0 77 80-169 21-99 (182)
38 2ywx_A Phosphoribosylaminoimid 44.9 70 0.0024 28.1 7.7 61 97-168 12-73 (157)
39 1ujn_A Dehydroquinate synthase 42.9 30 0.001 34.2 5.7 89 80-186 28-118 (348)
40 3trh_A Phosphoribosylaminoimid 41.0 1.2E+02 0.0039 27.0 8.5 75 82-169 8-84 (169)
41 3s4e_A Dual specificity protei 38.2 5.9 0.0002 33.6 -0.4 33 16-48 73-106 (144)
42 2hig_A 6-phospho-1-fructokinas 38.1 63 0.0022 33.6 7.3 42 147-193 189-233 (487)
43 3rf7_A Iron-containing alcohol 37.8 44 0.0015 33.5 6.0 45 148-193 110-168 (375)
44 2j16_A SDP-1, tyrosine-protein 36.6 6.6 0.00022 35.4 -0.3 31 18-48 111-142 (182)
45 4b4k_A N5-carboxyaminoimidazol 36.0 1.7E+02 0.0057 26.2 8.8 77 79-168 20-99 (181)
46 3emu_A Leucine rich repeat and 35.4 7.1 0.00024 34.0 -0.3 32 17-48 80-112 (161)
47 3ezz_A Dual specificity protei 34.9 7.6 0.00026 32.8 -0.2 32 17-48 74-106 (144)
48 1pfk_A Phosphofructokinase; tr 33.9 1.2E+02 0.0041 29.7 8.3 40 146-193 93-132 (320)
49 2nt2_A Protein phosphatase sli 31.5 8.5 0.00029 32.6 -0.5 32 17-48 74-106 (145)
50 1zxx_A 6-phosphofructokinase; 31.0 1E+02 0.0036 30.1 7.3 40 146-193 92-131 (319)
51 1xah_A Sadhqs, 3-dehydroquinat 31.0 32 0.0011 34.0 3.6 90 81-186 32-124 (354)
52 3hbm_A UDP-sugar hydrolase; PS 29.5 1.5E+02 0.0052 28.1 8.1 29 146-186 224-252 (282)
53 1wrm_A Dual specificity phosph 27.6 11 0.00037 32.8 -0.5 31 18-48 77-108 (165)
54 1zzw_A Dual specificity protei 27.5 11 0.00037 32.0 -0.5 31 17-47 76-107 (149)
55 3rgo_A Protein-tyrosine phosph 27.2 11 0.00036 32.1 -0.6 31 18-48 83-114 (157)
56 2hcm_A Dual specificity protei 26.7 12 0.00039 32.5 -0.5 31 18-48 83-114 (164)
57 2x9a_A Attachment protein G3P; 26.7 16 0.00056 27.0 0.4 12 149-160 39-50 (65)
58 3gw6_A Endo-N-acetylneuraminid 26.2 23 0.00077 34.0 1.4 14 148-161 46-59 (275)
59 2h31_A Multifunctional protein 25.7 1.5E+02 0.005 30.3 7.5 76 81-169 266-344 (425)
60 3f81_A Dual specificity protei 25.1 14 0.00046 32.6 -0.3 30 19-48 109-140 (183)
61 2esb_A Dual specificity protei 24.2 14 0.00048 33.0 -0.4 31 18-48 91-122 (188)
62 3cm3_A Late protein H1, dual s 23.8 14 0.00047 32.5 -0.5 32 17-48 101-133 (176)
63 4a3s_A 6-phosphofructokinase; 23.6 1.8E+02 0.0061 28.3 7.5 39 147-193 93-131 (319)
64 3hno_A Pyrophosphate-dependent 23.5 2.2E+02 0.0075 28.9 8.3 46 146-193 103-148 (419)
65 2g6z_A Dual specificity protei 23.0 17 0.00057 33.5 -0.1 31 18-48 77-108 (211)
66 2iz6_A Molybdenum cofactor car 22.9 1.1E+02 0.0037 27.2 5.3 49 127-187 30-79 (176)
67 4hf7_A Putative acylhydrolase; 22.7 69 0.0023 28.3 4.0 59 153-218 57-115 (209)
68 2r0b_A Serine/threonine/tyrosi 22.6 16 0.00054 31.1 -0.4 30 18-47 84-114 (154)
69 2y96_A Dual specificity phosph 22.0 16 0.00055 33.6 -0.5 27 22-48 137-164 (219)
70 3opy_A 6-phosphofructo-1-kinas 21.9 1.6E+02 0.0055 33.3 7.4 46 147-193 688-733 (989)
71 2hxp_A Dual specificity protei 21.8 16 0.00056 31.3 -0.5 31 18-48 79-110 (155)
72 2e0t_A Dual specificity phosph 21.7 16 0.00055 30.9 -0.5 26 23-48 84-110 (151)
73 2oud_A Dual specificity protei 21.5 16 0.00056 32.1 -0.5 30 18-47 81-111 (177)
74 3o8l_A 6-phosphofructokinase, 20.4 2.1E+02 0.0072 31.5 7.9 66 146-217 488-553 (762)
75 1yz4_A DUSP15, dual specificit 20.3 20 0.0007 30.7 -0.2 31 18-48 78-109 (160)
No 1
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=100.00 E-value=1.3e-44 Score=363.49 Aligned_cols=285 Identities=20% Similarity=0.180 Sum_probs=205.2
Q ss_pred CCCceEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEeeecCcceeecchhHHHHHHhcchhhhhcccCcceEEEEcCC
Q 011840 78 PPEAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGD 157 (476)
Q Consensus 78 ~~~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~~v~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Ivv~GGD 157 (476)
..+++++||+||+||++++.+.+++++..|.... +++.. +.|++.+|++++++++. .+.+.||++|||
T Consensus 6 ~~m~~~~vi~Np~sG~~~~~~~~~~i~~~l~~~~-~~~~~-----~~t~~~~~a~~~~~~~~------~~~d~vv~~GGD 73 (304)
T 3s40_A 6 TKFEKVLLIVNPKAGQGDLHTNLTKIVPPLAAAF-PDLHI-----LHTKEQGDATKYCQEFA------SKVDLIIVFGGD 73 (304)
T ss_dssp CSCSSEEEEECTTCSSSCHHHHHHHHHHHHHHHC-SEEEE-----EECCSTTHHHHHHHHHT------TTCSEEEEEECH
T ss_pred CCCCEEEEEECcccCCCchHHHHHHHHHHHHHcC-CeEEE-----EEccCcchHHHHHHHhh------cCCCEEEEEccc
Confidence 3578999999999999999889999999998764 45443 34678899999998753 367899999999
Q ss_pred hhHHHHHHHHHhhhccCCCCCCcEEEecCCCCcccccccCCCCCCCCcHHHHHHHHHHHHHcCCceeeeeeEEEEecCCC
Q 011840 158 GTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWHAVIQMPSG 237 (476)
Q Consensus 158 GTv~~vln~l~~~~~~~~~~~~plgiIPlGTgNdfarslg~g~~~p~~~~~al~~~l~~i~~g~~~~iD~~~v~~~~~~~ 237 (476)
||++||+|+|... ..++|||+||+||+|||||+||+ |.++.++++ .+.+|+.+++|+|.+
T Consensus 74 GTl~~v~~~l~~~-----~~~~~l~iiP~Gt~N~~ar~lg~----~~~~~~a~~----~i~~g~~~~iDlg~v------- 133 (304)
T 3s40_A 74 GTVFECTNGLAPL-----EIRPTLAIIPGGTCNDFSRTLGV----PQNIAEAAK----LITKEHVKPVDVAKA------- 133 (304)
T ss_dssp HHHHHHHHHHTTC-----SSCCEEEEEECSSCCHHHHHTTC----CSSHHHHHH----HHTTCCEEEEEEEEE-------
T ss_pred hHHHHHHHHHhhC-----CCCCcEEEecCCcHHHHHHHcCC----CccHHHHHH----HHHhCCeEEEEEEEE-------
Confidence 9999999999863 25799999999999999999999 556665554 466899999999983
Q ss_pred cccCCCCCCCCCcccccccccccCCcccccccceEEEEEeeeehHHHhhhhhhccccCCccccccCCCceeeeccccccc
Q 011840 238 EVVDPPHSLKPTEDCALDQIEGALPEKVNCYEGVFYNYFSIGMDAQVAYGFHHLRNEKPYLAQGPISNKLIYSGYSCTQG 317 (476)
Q Consensus 238 ~~~~~p~~~~~~~~~~~~~~ng~~~~~~~~~~~~F~n~~sIG~DA~V~~~~~~~R~~kp~~~~~rl~nkl~Y~~~~~~~~ 317 (476)
| +++|+|++|+||||+|++.++..+ | +..|+++|...+++.+
T Consensus 134 --------------------~----------~~~F~~~~~~G~da~v~~~~~~~~--k------~~~G~~~Y~~~~l~~l 175 (304)
T 3s40_A 134 --------------------N----------GQHFLNFWGIGLVSEVSNNIDAEE--K------AKLGKIGYYLSTIRTV 175 (304)
T ss_dssp --------------------T----------TEEESSEEEEC--------------------------CHHHHTTTC---
T ss_pred --------------------C----------CEEEEEEEeehHHHHHHHhcCHHH--h------hcCCchHHHHHHHHHH
Confidence 3 379999999999999999987543 1 1238899999887764
Q ss_pred ccccccCCCCcccccccceeeEEEeeecCCceEEeecCCceEEEEEcccccCCCCCcCCCCCchhhhccCCccccCCCCe
Q 011840 318 WFLTPCISDPNLRGLKNILRMHVKKVNCSEWEQVAVPKSVRAIVALNLHNYASGRNPWGNLSPEYLEKKGFVEAHADDGL 397 (476)
Q Consensus 318 ~~~~~~~~~p~~~~l~~~~~~~i~~v~~~~~e~i~~~~~~~~i~v~N~~~~ggG~~~wg~~~p~~~~~~~~~~a~~dDGl 397 (476)
+.. +..++++. +| ++.++ .++.+++|+|++|||||+.++ |+++++||+
T Consensus 176 ~~~-------------~~~~~~i~-~d---g~~~~--~~~~~v~v~N~~~~Ggg~~~~-------------p~a~~~DG~ 223 (304)
T 3s40_A 176 KNA-------------ETFPVKIT-YD---GQVYE--DEAVLVMVGNGEYLGGIPSFI-------------PNVKCDDGT 223 (304)
T ss_dssp ----------------CCEEEEEE-ET---TEEEE--EEEEEEEEECSSEETTEECSS-------------TTCCTTSSC
T ss_pred hhc-------------CCceEEEE-EC---CEEEE--eEEEEEEEECCCcCCCCcccC-------------CCCcCCCCE
Confidence 211 12344443 32 35443 458899999999999998863 589999999
Q ss_pred EEEEEEccchHHH--HHHHhhc------cceeEeeEeEEEEEecCCccccccEEecCCccCCCCCCCCceEEEEEEeccc
Q 011840 398 LEIFGLKQGWHAS--FVMVELI------SAKHIAQAAAIRLEFRGGEWKDAFMQMDGEPWKQPLNRDYSTFVEIKRVPFQ 469 (476)
Q Consensus 398 LeVv~l~~~~~~~--~~~~~l~------~g~~l~q~~~i~I~~~~~~~~~~~~qiDGE~~~~p~~~~~~~~v~i~~~p~~ 469 (476)
|||++++...... .++..+. ...++.++++++|++. +++++|+|||++.. +.++|++.|.+
T Consensus 224 Ldv~~v~~~~~~~l~~l~~~~~~g~~~~~~v~~~~~~~v~i~~~----~~~~~~~DGE~~~~-------~p~~i~v~p~a 292 (304)
T 3s40_A 224 LDIFVVKSTGIQAFKDYIGKKLFEDSNENDIFHVKAKSIHIETE----EEKEVDTDGESSLH-------TPCQIELLQGH 292 (304)
T ss_dssp EEEEEEETTCHHHHHHHTTCCCSSCCCTTTEEEEEESEEEEEES----SCCEEEEC--CCEE-------SSEEEEEEEEE
T ss_pred EEEEEEccCCHHHHHHHHHHHhcCCCCCCcEEEEEccEEEEEeC----CCcEEEeCCCCCCC-------ceEEEEEECCe
Confidence 9999998854322 2232222 2356789999999987 57999999999864 34999999999
Q ss_pred cccccC
Q 011840 470 SLMISG 475 (476)
Q Consensus 470 ~~~~~~ 475 (476)
..++..
T Consensus 293 l~v~~p 298 (304)
T 3s40_A 293 FTMIYN 298 (304)
T ss_dssp EEEECC
T ss_pred EEEEec
Confidence 888764
No 2
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=100.00 E-value=4.1e-40 Score=335.19 Aligned_cols=283 Identities=17% Similarity=0.134 Sum_probs=209.6
Q ss_pred CceEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEeeecCcceeecchhHHHHHHhcchhhhhcccCcceEEEEcCChh
Q 011840 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (476)
Q Consensus 80 ~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~~v~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Ivv~GGDGT 159 (476)
+++++||+||.||++++.+.++++++.|.... +++... .|++.+++.++++++. ..+.+.||++|||||
T Consensus 24 m~~i~vI~NP~sg~~~~~~~~~~i~~~L~~~g-~~~~~~-----~t~~~~~a~~~~~~~~-----~~~~d~vvv~GGDGT 92 (337)
T 2qv7_A 24 RKRARIIYNPTSGKEQFKRELPDALIKLEKAG-YETSAY-----ATEKIGDATLEAERAM-----HENYDVLIAAGGDGT 92 (337)
T ss_dssp CEEEEEEECTTSTTSCHHHHHHHHHHHHHHTT-EEEEEE-----ECCSTTHHHHHHHHHT-----TTTCSEEEEEECHHH
T ss_pred cceEEEEECCCCCCCchHHHHHHHHHHHHHcC-CeEEEE-----EecCcchHHHHHHHHh-----hcCCCEEEEEcCchH
Confidence 56899999999999888888999999998754 555542 3456678888876653 246789999999999
Q ss_pred HHHHHHHHHhhhccCCCCCCcEEEecCCCCcccccccCCCCCCCCcHHHHHHHHHHHHHcCCceeeeeeEEEEecCCCcc
Q 011840 160 VGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWHAVIQMPSGEV 239 (476)
Q Consensus 160 v~~vln~l~~~~~~~~~~~~plgiIPlGTgNdfarslg~g~~~p~~~~~al~~~l~~i~~g~~~~iD~~~v~~~~~~~~~ 239 (476)
|+||+++|.+. ...+|||+||+||+|||||+||+ |.++.++++ .+.+|+.+.+|+|.+
T Consensus 93 v~~v~~~l~~~-----~~~~pl~iIP~GT~N~lAr~Lg~----~~~~~~al~----~i~~g~~~~iD~g~v--------- 150 (337)
T 2qv7_A 93 LNEVVNGIAEK-----PNRPKLGVIPMGTVNDFGRALHI----PNDIMGALD----VIIEGHSTKVDIGKM--------- 150 (337)
T ss_dssp HHHHHHHHTTC-----SSCCEEEEEECSSCCHHHHHTTC----CSSHHHHHH----HHHHTCEEEEEEEEE---------
T ss_pred HHHHHHHHHhC-----CCCCcEEEecCCcHhHHHHHcCC----CCCHHHHHH----HHHcCCcEEEEEEEE---------
Confidence 99999999653 26799999999999999999998 556655555 455799999999974
Q ss_pred cCCCCCCCCCcccccccccccCCcccccccceEEEEEeeeehHHHhhhhhhccccCCccccccCCCceeeeccccccccc
Q 011840 240 VDPPHSLKPTEDCALDQIEGALPEKVNCYEGVFYNYFSIGMDAQVAYGFHHLRNEKPYLAQGPISNKLIYSGYSCTQGWF 319 (476)
Q Consensus 240 ~~~p~~~~~~~~~~~~~~ng~~~~~~~~~~~~F~n~~sIG~DA~V~~~~~~~R~~kp~~~~~rl~nkl~Y~~~~~~~~~~ 319 (476)
| +++|+|++++||||+|++.++..++ +..|+++|...+++.++.
T Consensus 151 ------------------~----------~r~fl~~~~~G~~a~v~~~~~~~~k--------~~~G~~~Y~~~~l~~l~~ 194 (337)
T 2qv7_A 151 ------------------N----------NRYFINLAAGGQLTQVSYETPSKLK--------SIVGPFAYYIKGFEMLPQ 194 (337)
T ss_dssp ------------------T----------TEEESSEEEEECBCC---------------------CGGGSCCCTTTTGGG
T ss_pred ------------------C----------CEEEEEEeeecccHHHHHHhhHHHH--------hccChHHHHHHHHHHHHh
Confidence 2 3799999999999999998876431 122788999988776531
Q ss_pred ccccCCCCcccccccceeeEEEeeecCCceEEeecCCceEEEEEcccccCCCCCcCCCCCchhhhccCCccccCCCCeEE
Q 011840 320 LTPCISDPNLRGLKNILRMHVKKVNCSEWEQVAVPKSVRAIVALNLHNYASGRNPWGNLSPEYLEKKGFVEAHADDGLLE 399 (476)
Q Consensus 320 ~~~~~~~p~~~~l~~~~~~~i~~v~~~~~e~i~~~~~~~~i~v~N~~~~ggG~~~wg~~~p~~~~~~~~~~a~~dDGlLe 399 (476)
.+.+++++. ++ ++.++ .+...+++.|+++++||..++ |.++++||+||
T Consensus 195 -------------~~~~~~~i~-~d---g~~~~--~~~~~v~v~n~~~~gGg~~i~-------------P~a~~~DG~ld 242 (337)
T 2qv7_A 195 -------------MKAVDLRIE-YD---GNVFQ--GEALLFFLGLTNSMAGFEKLV-------------PDAKLDDGYFT 242 (337)
T ss_dssp -------------BCCEEEEEE-ET---TEEEE--EEEEEEEEESSCCCSSCSCSS-------------TTCCSSSSCEE
T ss_pred -------------CCCccEEEE-EC---CEEEE--eeEEEEEEECCCCCCCCCccC-------------CCCcCCCCeEE
Confidence 122344443 33 35443 568889999999999998864 58999999999
Q ss_pred EEEEccchHHH--HHHHhhccc-------eeEeeEeEEEEEecCCccccccEEecCCccCCCCCCCCceEEEEEEecccc
Q 011840 400 IFGLKQGWHAS--FVMVELISA-------KHIAQAAAIRLEFRGGEWKDAFMQMDGEPWKQPLNRDYSTFVEIKRVPFQS 470 (476)
Q Consensus 400 Vv~l~~~~~~~--~~~~~l~~g-------~~l~q~~~i~I~~~~~~~~~~~~qiDGE~~~~p~~~~~~~~v~i~~~p~~~ 470 (476)
+++++...... .++..+..| .++.++++++|+.. ++.++++|||++.. +.++|++.|.+.
T Consensus 243 v~~v~~~~~~~l~~~~~~v~~g~~~~~~~v~~~~~~~i~i~~~----~~~~~~iDGE~~~~-------~~i~i~v~p~~l 311 (337)
T 2qv7_A 243 LIIVEKSNLAELGHIMTLASRGEHTKHPKVIYEKAKAINISSF----TDLQLNVDGEYGGK-------LPANFLNLERHI 311 (337)
T ss_dssp EEEEECCCHHHHHHHHHHHTTTCGGGSTTEEEEEESEEEEECS----SCCEEEETTEEEEE-------SCEEEEEEEEEE
T ss_pred EEEEccCCHHHHHHHHHHHhcCCccCCCCEEEEEeeEEEEEEC----CCCeEEECCCcCCC-------CcEEEEEEcCeE
Confidence 99999853333 334444444 35678999999865 57899999999863 349999999988
Q ss_pred cccc
Q 011840 471 LMIS 474 (476)
Q Consensus 471 ~~~~ 474 (476)
.++.
T Consensus 312 ~v~~ 315 (337)
T 2qv7_A 312 DVFA 315 (337)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 8764
No 3
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=100.00 E-value=1.1e-39 Score=331.59 Aligned_cols=283 Identities=19% Similarity=0.178 Sum_probs=203.5
Q ss_pred CCceEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEeeecCcceeecchhHHHHHHhcchhhhhcccCcceEEEEcCCh
Q 011840 79 PEAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (476)
Q Consensus 79 ~~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~~v~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Ivv~GGDG 158 (476)
.+++++||+||.||++ +.++++.+.|..+. +++... .|.+.+++.++++++. ..+.+.||++||||
T Consensus 28 ~~~~~~vi~Np~sg~~---~~~~~i~~~l~~~g-~~~~~~-----~t~~~~~~~~~~~~~~-----~~~~d~vvv~GGDG 93 (332)
T 2bon_A 28 EFPASLLILNGKSTDN---LPLREAIMLLREEG-MTIHVR-----VTWEKGDAARYVEEAR-----KFGVATVIAGGGDG 93 (332)
T ss_dssp --CCEEEEECSSSTTC---HHHHHHHHHHHTTT-CCEEEE-----ECCSTTHHHHHHHHHH-----HHTCSEEEEEESHH
T ss_pred hcceEEEEECCCCCCC---chHHHHHHHHHHcC-CcEEEE-----EecCcchHHHHHHHHH-----hcCCCEEEEEccch
Confidence 3678999999999976 56777888887653 444432 2445677877776543 24578999999999
Q ss_pred hHHHHHHHHHhhhccCCCCCCcEEEecCCCCcccccccCCCCCCCCcHHHHHHHHHHHHHcCCceeeeeeEEEEecCCCc
Q 011840 159 TVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPICRLDSWHAVIQMPSGE 238 (476)
Q Consensus 159 Tv~~vln~l~~~~~~~~~~~~plgiIPlGTgNdfarslg~g~~~p~~~~~al~~~l~~i~~g~~~~iD~~~v~~~~~~~~ 238 (476)
|++||+++|.+... ...+|||+||+||+|||||+|+| |.++.++++. +.+|+.+++|+|.+
T Consensus 94 Tl~~v~~~l~~~~~---~~~~plgiiP~Gt~N~fa~~l~i----~~~~~~al~~----i~~g~~~~iDlg~v-------- 154 (332)
T 2bon_A 94 TINEVSTALIQCEG---DDIPALGILPLGTANDFATSVGI----PEALDKALKL----AIAGDAIAIDMAQV-------- 154 (332)
T ss_dssp HHHHHHHHHHHCCS---SCCCEEEEEECSSSCHHHHHTTC----CSSHHHHHHH----HHHSEEEEEEEEEE--------
T ss_pred HHHHHHHHHhhccc---CCCCeEEEecCcCHHHHHHhcCC----CCCHHHHHHH----HHcCCeEEeeEEEE--------
Confidence 99999999985311 25789999999999999999999 5566555554 55799999999974
Q ss_pred ccCCCCCCCCCcccccccccccCCcccccccc-eEEEEEeeeehHHHhhhhhhccccCCccccccCCCceeeeccccccc
Q 011840 239 VVDPPHSLKPTEDCALDQIEGALPEKVNCYEG-VFYNYFSIGMDAQVAYGFHHLRNEKPYLAQGPISNKLIYSGYSCTQG 317 (476)
Q Consensus 239 ~~~~p~~~~~~~~~~~~~~ng~~~~~~~~~~~-~F~n~~sIG~DA~V~~~~~~~R~~kp~~~~~rl~nkl~Y~~~~~~~~ 317 (476)
| ++ +|+|++|+||||+|++.++..+ | .++ |+++|...+++.+
T Consensus 155 -------------------~----------~r~~fl~~~~~G~da~v~~~~~~~~--k-----~~~-G~~~Y~~~~l~~l 197 (332)
T 2bon_A 155 -------------------N----------KQTCFINMATGGFGTRITTETPEKL--K-----AAL-GSVSYIIHGLMRM 197 (332)
T ss_dssp -------------------T----------TSCEESSEEEEEEEEEC-----------------CC-HHHHHHHHHTSCE
T ss_pred -------------------C----------CceEEEEEEeECccHHHHHHhhHHh--H-----hcc-cHHHHHHHHHHHH
Confidence 3 25 9999999999999998776432 1 123 7889988876654
Q ss_pred ccccccCCCCcccccccceeeEEEeeecCCceEEeecCCceEEEEEcccccCCCCCcCCCCCchhhhccCCccccCCCCe
Q 011840 318 WFLTPCISDPNLRGLKNILRMHVKKVNCSEWEQVAVPKSVRAIVALNLHNYASGRNPWGNLSPEYLEKKGFVEAHADDGL 397 (476)
Q Consensus 318 ~~~~~~~~~p~~~~l~~~~~~~i~~v~~~~~e~i~~~~~~~~i~v~N~~~~ggG~~~wg~~~p~~~~~~~~~~a~~dDGl 397 (476)
+. .+.+++++. ++ ++.++ .+...++++|++|||||+.+| |.++++||+
T Consensus 198 ~~-------------~~~~~~~i~-~d---g~~~~--~~~~~v~v~N~~~~ggg~~i~-------------P~a~~~DG~ 245 (332)
T 2bon_A 198 DT-------------LQPDRCEIR-GE---NFHWQ--GDALVIGIGNGRQAGGGQQLC-------------PNALINDGL 245 (332)
T ss_dssp EE-------------EECEEEEEE-ET---TEEEE--EEESEEEEESSSCBTTTBCSC-------------TTCCTTSSC
T ss_pred hh-------------CCCeeEEEE-EC---CEEEE--EEEEEEEEECCCccCCCcccC-------------CCCCCCCCe
Confidence 21 112344443 32 35443 467889999999999999874 589999999
Q ss_pred EEEEEEccchHHHHHHHhhcc-----ceeEeeEeEEEEEecCCccccccEEecCCccCCCCCCCCceEEEEEEecccccc
Q 011840 398 LEIFGLKQGWHASFVMVELIS-----AKHIAQAAAIRLEFRGGEWKDAFMQMDGEPWKQPLNRDYSTFVEIKRVPFQSLM 472 (476)
Q Consensus 398 LeVv~l~~~~~~~~~~~~l~~-----g~~l~q~~~i~I~~~~~~~~~~~~qiDGE~~~~p~~~~~~~~v~i~~~p~~~~~ 472 (476)
|||++++...++..++..+.. ..++.++++|+|++. +++++|+|||++.. +.++|++.|.+..+
T Consensus 246 Ldv~iv~~~~~~l~~~~~~~~g~~~~~v~~~~~~~i~I~~~----~~~~~~iDGE~~~~-------~~~~i~v~p~al~v 314 (332)
T 2bon_A 246 LQLRIFTGDEILPALVSTLKSDEDNPNIIEGASSWFDIQAP----HDITFNLDGEPLSG-------QNFHIEILPAALRC 314 (332)
T ss_dssp EEEEEECCSSCCHHHHHHHHTTCCCTTEEEEEESEEEEEEE----EEEEEEETTEEEEE-------EEEEEEEEEEEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHcCCCCCcEEEEEeeEEEEEEC----CCCeEEecCCCCCC-------ceEEEEEECCeeEE
Confidence 999999886332333344444 345678999999875 57899999999873 56999999988877
Q ss_pred cc
Q 011840 473 IS 474 (476)
Q Consensus 473 ~~ 474 (476)
+.
T Consensus 315 l~ 316 (332)
T 2bon_A 315 RL 316 (332)
T ss_dssp EE
T ss_pred Ee
Confidence 64
No 4
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=99.38 E-value=6e-12 Score=124.92 Aligned_cols=113 Identities=16% Similarity=0.137 Sum_probs=65.9
Q ss_pred CceEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEeeecCcceeecchhHHHHHH----hcchhhhhcccCcceEEEEc
Q 011840 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLA----ELGDFCAKDTRQKMRIVVAG 155 (476)
Q Consensus 80 ~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~~v~dl~~~~p~~~~t~~~~~~~~la----~~~~~~a~~~~~~~~Ivv~G 155 (476)
++++++|+||.++. ..+.++.+.+.|..+ .+++..... .+..+. ..... .....+.|.||++|
T Consensus 5 mkki~ii~np~~~~--~~~~~~~i~~~l~~~-g~~v~~~~~---------~~~~~~~~~~~~~~~-~~~~~~~D~vi~~G 71 (292)
T 2an1_A 5 FKCIGIVGHPRHPT--ALTTHEMLYRWLCDQ-GYEVIVEQQ---------IAHELQLKNVPTGTL-AEIGQQADLAVVVG 71 (292)
T ss_dssp CCEEEEECC---------CHHHHHHHHHHHT-TCEEEEEHH---------HHHHTTCSSCCEECH-HHHHHHCSEEEECS
T ss_pred CcEEEEEEcCCCHH--HHHHHHHHHHHHHHC-CCEEEEecc---------hhhhcccccccccch-hhcccCCCEEEEEc
Confidence 58899999998753 346778888888765 355543211 011110 00000 00013468999999
Q ss_pred CChhHHHHHHHHHhhhccCCCCCCcEEEecCCCCcccccccCCCCCCCCcHHHHHHHHHHHHHcCCc
Q 011840 156 GDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPI 222 (476)
Q Consensus 156 GDGTv~~vln~l~~~~~~~~~~~~plgiIPlGTgNdfarslg~g~~~p~~~~~al~~~l~~i~~g~~ 222 (476)
||||++++++.+.+. ..|.||| |+||.|+|++ ++ |.++.++++. +.+|+.
T Consensus 72 GDGT~l~a~~~~~~~------~~P~lGI-~~Gt~gfla~-~~-----~~~~~~al~~----i~~g~~ 121 (292)
T 2an1_A 72 GDGNMLGAARTLARY------DINVIGI-NRGNLGFLTD-LD-----PDNALQQLSD----VLEGRY 121 (292)
T ss_dssp CHHHHHHHHHHHTTS------SCEEEEB-CSSSCCSSCC-BC-----TTSHHHHHHH----HHTTCE
T ss_pred CcHHHHHHHHHhhcC------CCCEEEE-ECCCcccCCc-CC-----HHHHHHHHHH----HHcCCC
Confidence 999999999999762 2344776 8999888886 33 4455555554 445654
No 5
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=99.19 E-value=6.7e-11 Score=115.52 Aligned_cols=97 Identities=20% Similarity=0.206 Sum_probs=65.2
Q ss_pred eEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEeeecCcceeecchhHHHHHHhcchhhhhcccCcceEEEEcCChhHH
Q 011840 82 PMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTVG 161 (476)
Q Consensus 82 ~~lvivNP~SG~~~~~~~~~~l~~~L~~~~v~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Ivv~GGDGTv~ 161 (476)
++++|+||.||.+ ..++.+++.+.|. .+++. + . + ++ ...+.|.||++|||||++
T Consensus 2 ki~ii~Np~~~~~-~~~~~~~i~~~l~---~~~~~--------~-~--~------~~-----~~~~~D~vv~~GGDGTll 55 (258)
T 1yt5_A 2 KIAILYREEREKE-GEFLKEKISKEHE---VIEFG--------E-A--N------AP-----GRVTADLIVVVGGDGTVL 55 (258)
T ss_dssp EEEEEECGGGHHH-HHHHHHHHTTTSE---EEEEE--------E-S--S------SC-----SCBCCSEEEEEECHHHHH
T ss_pred EEEEEEeCCCchH-HHHHHHHHHHHhc---CCcee--------c-c--c------cc-----ccCCCCEEEEEeCcHHHH
Confidence 6899999999976 6677777777665 24432 1 1 1 11 124578999999999999
Q ss_pred HHHHHHHhhhccCCCCCCcEEEecCCCCcccccccCCCCCCCCcHHHHHHHHHHHHHcCCc
Q 011840 162 WVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPI 222 (476)
Q Consensus 162 ~vln~l~~~~~~~~~~~~plgiIPlGTgNdfarslg~g~~~p~~~~~al~~~l~~i~~g~~ 222 (476)
++++.+.. + .|.+|| ++||.+.|+ .+. |.++.++++. +.+|+.
T Consensus 56 ~~a~~~~~-~------~PilGI-n~G~~Gfl~-~~~-----~~~~~~al~~----i~~g~~ 98 (258)
T 1yt5_A 56 KAAKKAAD-G------TPMVGF-KAGRLGFLT-SYT-----LDEIDRFLED----LRNWNF 98 (258)
T ss_dssp HHHTTBCT-T------CEEEEE-ESSSCCSSC-CBC-----GGGHHHHHHH----HHTTCC
T ss_pred HHHHHhCC-C------CCEEEE-ECCCCCccC-cCC-----HHHHHHHHHH----HHcCCc
Confidence 99998863 1 344777 599996666 453 4565555554 445654
No 6
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=99.18 E-value=2.3e-10 Score=112.54 Aligned_cols=94 Identities=15% Similarity=0.157 Sum_probs=64.1
Q ss_pred ceEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEeeecCcceeecchhHHHHHHhcchhhhhcccCcceEEEEcCChhH
Q 011840 81 APMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTV 160 (476)
Q Consensus 81 ~~~lvivNP~SG~~~~~~~~~~l~~~L~~~~v~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Ivv~GGDGTv 160 (476)
+++.+|+||+ .+..+.++++.+.|..+. +++. ..+.|.||++|||||+
T Consensus 1 mki~ii~n~~---~~~~~~~~~l~~~l~~~g-~~v~----------------------------~~~~D~vv~lGGDGT~ 48 (272)
T 2i2c_A 1 MKYMITSKGD---EKSDLLRLNMIAGFGEYD-MEYD----------------------------DVEPEIVISIGGDGTF 48 (272)
T ss_dssp CEEEEEECCS---HHHHHHHHHHHHHHTTSS-CEEC----------------------------SSSCSEEEEEESHHHH
T ss_pred CEEEEEECCC---HHHHHHHHHHHHHHHHCC-CEeC----------------------------CCCCCEEEEEcCcHHH
Confidence 3688999973 245567788888887642 4321 1356899999999999
Q ss_pred HHHHHHHHhhhccCCCCCCc-EEEecCCCCcccccccCCCCCCCCcHHHHHHHHHHHHHcCCc
Q 011840 161 GWVLGSVGELNKQGREPVPP-VAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAGPI 222 (476)
Q Consensus 161 ~~vln~l~~~~~~~~~~~~p-lgiIPlGTgNdfarslg~g~~~p~~~~~al~~~l~~i~~g~~ 222 (476)
..+++.+.... .++| +|| |+|| |.|...+. |.++.++++ .+.+|..
T Consensus 49 l~aa~~~~~~~-----~~~PilGI-n~G~-lgfl~~~~-----~~~~~~~l~----~l~~g~~ 95 (272)
T 2i2c_A 49 LSAFHQYEERL-----DEIAFIGI-HTGH-LGFYADWR-----PAEADKLVK----LLAKGEY 95 (272)
T ss_dssp HHHHHHTGGGT-----TTCEEEEE-ESSS-CCSSCCBC-----GGGHHHHHH----HHHTTCC
T ss_pred HHHHHHHhhcC-----CCCCEEEE-eCCC-CCcCCcCC-----HHHHHHHHH----HHHcCCC
Confidence 99999997520 2456 666 9999 66877774 445545544 4556654
No 7
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=99.18 E-value=4.8e-10 Score=112.20 Aligned_cols=112 Identities=14% Similarity=0.222 Sum_probs=66.3
Q ss_pred CceEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEeeecCcceeecch-------------h-HHHHHHhcchhhhhcc
Q 011840 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGL-------------A-CLEKLAELGDFCAKDT 145 (476)
Q Consensus 80 ~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~~v~dl~~~~p~~~~t~~~-------------~-~~~~la~~~~~~a~~~ 145 (476)
++++++|+||.++. ..+.++++.+.|..+. +++....+.. ... + ++..+++... ..
T Consensus 4 m~ki~iI~n~~~~~--~~~~~~~l~~~L~~~g-~~v~~~~~~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~~----~~ 73 (307)
T 1u0t_A 4 HRSVLLVVHTGRDE--ATETARRVEKVLGDNK-IALRVLSAEA---VDRGSLHLAPDDMRAMGVEIEVVDADQH----AA 73 (307)
T ss_dssp -CEEEEEESSSGGG--GSHHHHHHHHHHHTTT-CEEEEEC----------------------------------------
T ss_pred CCEEEEEEeCCCHH--HHHHHHHHHHHHHHCC-CEEEEecchh---hhhhcccccccccccccccccccccccc----cc
Confidence 67899999999863 3467788888887654 5544322111 000 0 1111111100 12
Q ss_pred cCcceEEEEcCChhHHHHHHHHHhhhccCCCCCCcEEEecCCCCcccccccCCCCCCCCcHHHHHHHHH
Q 011840 146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTL 214 (476)
Q Consensus 146 ~~~~~Ivv~GGDGTv~~vln~l~~~~~~~~~~~~plgiIPlGTgNdfarslg~g~~~p~~~~~al~~~l 214 (476)
.+.|.||++|||||+.++++.+... ..|.+|| ++||.|.|+. +. |.++.++++.++
T Consensus 74 ~~~d~vi~~GGDGT~l~a~~~~~~~------~~pvlgi-~~G~~gfl~~-~~-----~~~~~~~~~~i~ 129 (307)
T 1u0t_A 74 DGCELVLVLGGDGTFLRAAELARNA------SIPVLGV-NLGRIGFLAE-AE-----AEAIDAVLEHVV 129 (307)
T ss_dssp --CCCEEEEECHHHHHHHHHHHHHH------TCCEEEE-ECSSCCSSCS-EE-----GGGHHHHHHHHH
T ss_pred cCCCEEEEEeCCHHHHHHHHHhccC------CCCEEEE-eCCCCccCcc-cC-----HHHHHHHHHHHH
Confidence 4578999999999999999999763 2344775 8999999985 42 456555665543
No 8
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=97.36 E-value=0.00061 Score=69.90 Aligned_cols=124 Identities=18% Similarity=0.141 Sum_probs=70.8
Q ss_pred CCceEEEEEcCCCCCCChhHHHHHHHHhhhhcC-eeEEeeecCcceeecchhHHHHHHhcch----------------hh
Q 011840 79 PEAPMVVFINSRSGGRHGPELKERLQELMGKEQ-VFDLSEVKPHEFVQYGLACLEKLAELGD----------------FC 141 (476)
Q Consensus 79 ~~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~~-v~dl~~~~p~~~~t~~~~~~~~la~~~~----------------~~ 141 (476)
++++++||.||.. ....+...++.+.|..+. .+++.+.. ..+..+..... ..
T Consensus 40 ~~k~V~II~n~~~--~~~~~~~~~l~~~L~~~~~gi~V~ve~---------~~a~~l~~~~~~~~~~~~~~~~~~~~~~~ 108 (388)
T 3afo_A 40 PLQNVYITKKPWT--PSTREAMVEFITHLHESYPEVNVIVQP---------DVAEEISQDFKSPLENDPNRPHILYTGPE 108 (388)
T ss_dssp CCCEEEEEECTTC--HHHHHHHHHHHHHHHHHCTTCEEECCH---------HHHHHHHTTCCSCGGGCTTSCEEEEECCH
T ss_pred CCcEEEEEEeCCC--HHHHHHHHHHHHHHHHhCCCeEEEEeC---------chhhhhhhhccccccccccccccccccch
Confidence 4789999999874 344566777777776641 24443211 11122211100 00
Q ss_pred hhcccCcceEEEEcCChhHHHHHHHHHhhhccCCCCC-CcEEEecCCCCcccccccCCCCCCCCcHHHHHHHHHHHHHcC
Q 011840 142 AKDTRQKMRIVVAGGDGTVGWVLGSVGELNKQGREPV-PPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRASAG 220 (476)
Q Consensus 142 a~~~~~~~~Ivv~GGDGTv~~vln~l~~~~~~~~~~~-~plgiIPlGTgNdfarslg~g~~~p~~~~~al~~~l~~i~~g 220 (476)
.......|.||++|||||+..++..+... .. |.||| ++||.+-|+. +.. .+. +.+++.+.+|
T Consensus 109 ~~~~~~~DlVIvlGGDGTlL~aa~~~~~~------~vpPiLGI-N~G~lGFLt~-~~~-----~~~----~~al~~il~g 171 (388)
T 3afo_A 109 QDIVNRTDLLVTLGGDGTILHGVSMFGNT------QVPPVLAF-ALGTLGFLSP-FDF-----KEH----KKVFQEVISS 171 (388)
T ss_dssp HHHHHHCSEEEEEESHHHHHHHHHTTTTS------CCCCEEEE-ECSSCCSSCC-EEG-----GGH----HHHHHHHHTT
T ss_pred hhcccCCCEEEEEeCcHHHHHHHHHhccc------CCCeEEEE-ECCCcccCCc-CCh-----HHH----HHHHHHHhcC
Confidence 00012468999999999999999887642 22 34555 9999866653 432 344 3444556677
Q ss_pred CceeeeeeEE
Q 011840 221 PICRLDSWHA 230 (476)
Q Consensus 221 ~~~~iD~~~v 230 (476)
.......-.+
T Consensus 172 ~~~~~~r~~L 181 (388)
T 3afo_A 172 RAKCLHRTRL 181 (388)
T ss_dssp CCEEEEECCE
T ss_pred CceEEEeeEE
Confidence 7654444433
No 9
>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A*
Probab=95.79 E-value=0.036 Score=54.12 Aligned_cols=93 Identities=20% Similarity=0.310 Sum_probs=58.6
Q ss_pred ceEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEeeecCcceeecchhHHHHHHhcchhhhhcccCcceEEEEcCChhH
Q 011840 81 APMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTV 160 (476)
Q Consensus 81 ~~~lvivNP~SG~~~~~~~~~~l~~~L~~~~v~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Ivv~GGDGTv 160 (476)
+++.++.|+..- .+++.+.|..+. +++...... +. ...+.|.||+.|||||+
T Consensus 30 mki~iv~~~~~~-------~~~l~~~L~~~g-~~v~~~~~~-------------~~-------~~~~~DlvIvlGGDGT~ 81 (278)
T 1z0s_A 30 MRAAVVYKTDGH-------VKRIEEALKRLE-VEVELFNQP-------------SE-------ELENFDFIVSVGGDGTI 81 (278)
T ss_dssp CEEEEEESSSTT-------HHHHHHHHHHTT-CEEEEESSC-------------CG-------GGGGSSEEEEEECHHHH
T ss_pred eEEEEEeCCcHH-------HHHHHHHHHHCC-CEEEEcccc-------------cc-------ccCCCCEEEEECCCHHH
Confidence 358899997654 556667776643 554332110 00 12356899999999999
Q ss_pred HHHHHHHHhhhccCCCCCCcEEEecCCCCcccccccCCCCCCCCcHHHHHHHHHH
Q 011840 161 GWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQ 215 (476)
Q Consensus 161 ~~vln~l~~~~~~~~~~~~plgiIPlGTgNdfarslg~g~~~p~~~~~al~~~l~ 215 (476)
-.++..+.. . +|+--|.+||-+=|+. +. |.+..++++++++
T Consensus 82 L~aa~~~~~-------~-~PilGIN~G~lGFLt~-~~-----~~~~~~~l~~l~~ 122 (278)
T 1z0s_A 82 LRILQKLKR-------C-PPIFGINTGRVGLLTH-AS-----PENFEVELKKAVE 122 (278)
T ss_dssp HHHHTTCSS-------C-CCEEEEECSSSCTTCC-BB-----TTBCHHHHHHHHH
T ss_pred HHHHHHhCC-------C-CcEEEECCCCCccccc-cC-----HHHHHHHHHHHHh
Confidence 888876543 3 7777778887665653 21 4456667766553
No 10
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}
Probab=94.40 E-value=0.4 Score=48.48 Aligned_cols=125 Identities=19% Similarity=0.151 Sum_probs=65.0
Q ss_pred CCceEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEeeecCcceeecchhHHHHHHh---------cch----hhhhcc
Q 011840 79 PEAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAE---------LGD----FCAKDT 145 (476)
Q Consensus 79 ~~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~~v~dl~~~~p~~~~t~~~~~~~~la~---------~~~----~~a~~~ 145 (476)
+.+.++||--|..- ...+...++.+.|..+. +.+.+.... ..+. .+.. ... ......
T Consensus 37 ~~k~I~iv~K~~~~--~~~~~~~~l~~~L~~~~-~~V~ve~~~------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (365)
T 3pfn_A 37 SPKSVLVIKKMRDA--SLLQPFKELCTHLMEEN-MIVYVEKKV------LEDP-AIASDESFGAVKKKFCTFREDYDDIS 106 (365)
T ss_dssp CCCEEEEEECTTCG--GGHHHHHHHHHHHHHTS-CEEEEEHHH------HHSH-HHHHCSTTHHHHHHCEEECTTTCCCT
T ss_pred CCCEEEEEecCCCH--HHHHHHHHHHHHHHHCC-CEEEEehHH------hhhh-ccccccccccccccccccccChhhcc
Confidence 56788888877643 33456677777776653 554332100 0000 0110 000 000011
Q ss_pred cCcceEEEEcCChhHHHHHHHHHhhhccCCCCCCcEEEecCCCCcccccccCCCCCCC-CcHHHHHHHHHHHHHcCCcee
Q 011840 146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFP-FAWKSAVKRTLQRASAGPICR 224 (476)
Q Consensus 146 ~~~~~Ivv~GGDGTv~~vln~l~~~~~~~~~~~~plgiIPlGTgNdfarslg~g~~~p-~~~~~al~~~l~~i~~g~~~~ 224 (476)
...|.||+.|||||+-.++..+.. ..+|+--|-+| +||+=..++ .+.. ..++++.+|...-
T Consensus 107 ~~~DlvI~lGGDGT~L~aa~~~~~-------~~~PvlGiN~G-------~LGFLt~~~~~~~~----~~l~~vl~g~~~v 168 (365)
T 3pfn_A 107 NQIDFIICLGGDGTLLYASSLFQG-------SVPPVMAFHLG-------SLGFLTPFSFENFQ----SQVTQVIEGNAAV 168 (365)
T ss_dssp TTCSEEEEESSTTHHHHHHHHCSS-------SCCCEEEEESS-------SCTTTCCEESTTHH----HHHHHHHHSCCBE
T ss_pred cCCCEEEEEcChHHHHHHHHHhcc-------CCCCEEEEcCC-------CCccceeecHHHHH----HHHHHHHcCCCeE
Confidence 356899999999999999887654 45665444455 344422222 2333 4445556676554
Q ss_pred eeeeEEE
Q 011840 225 LDSWHAV 231 (476)
Q Consensus 225 iD~~~v~ 231 (476)
-.+..++
T Consensus 169 ~~R~~L~ 175 (365)
T 3pfn_A 169 VLRSRLK 175 (365)
T ss_dssp EEECCEE
T ss_pred EEEeeEE
Confidence 4444333
No 11
>1o2d_A Alcohol dehydrogenase, iron-containing; TM0920, structural genomics, JCSG, PSI, protein structure initiative; HET: MSE NAP TRS; 1.30A {Thermotoga maritima} SCOP: e.22.1.2 PDB: 1vhd_A*
Probab=83.18 E-value=7.2 Score=39.09 Aligned_cols=101 Identities=22% Similarity=0.225 Sum_probs=57.6
Q ss_pred ceEEEEEcCCCCCCChhHHHHHHHHhhhhcC--eeEEeeecCcceeecchhHHHHHHhcchhhhhcccCcceEEEEcCCh
Q 011840 81 APMVVFINSRSGGRHGPELKERLQELMGKEQ--VFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (476)
Q Consensus 81 ~~~lvivNP~SG~~~~~~~~~~l~~~L~~~~--v~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Ivv~GGDG 158 (476)
++++|+..+.+-... .+.+++.+.|.... +..+....|.+ .....+++++.+. ..+.|.||++|| |
T Consensus 41 ~~~liVtd~~~~~~~--g~~~~v~~~L~~~g~~~~~~~~~~~~p----~~~~v~~~~~~~~-----~~~~d~IIavGG-G 108 (371)
T 1o2d_A 41 KRALVVTGKSSSKKN--GSLDDLKKLLDETEISYEIFDEVEENP----SFDNVMKAVERYR-----NDSFDFVVGLGG-G 108 (371)
T ss_dssp SEEEEEEESSGGGTS--SHHHHHHHHHHHTTCEEEEEEEECSSC----BHHHHHHHHHHHT-----TSCCSEEEEEES-H
T ss_pred CEEEEEECchHHhhc--cHHHHHHHHHHHcCCeEEEeCCccCCC----CHHHHHHHHHHHH-----hcCCCEEEEeCC-h
Confidence 789999987554332 25566766775432 11122223332 2244455554432 235789999998 8
Q ss_pred hHHHHHHHHHhhhcc------------CCCCCCcEEEecC--CCCcccc
Q 011840 159 TVGWVLGSVGELNKQ------------GREPVPPVAIIPL--GTGNDLS 193 (476)
Q Consensus 159 Tv~~vln~l~~~~~~------------~~~~~~plgiIPl--GTgNdfa 193 (476)
++..++..+...-.. .....+|+..||. |||-...
T Consensus 109 sv~D~AK~iA~~~~~~~~~~~~~~~~~~~~~~~p~i~IPTTagtgse~t 157 (371)
T 1o2d_A 109 SPMDFAKAVAVLLKEKDLSVEDLYDREKVKHWLPVVEIPTTAGTGSEVT 157 (371)
T ss_dssp HHHHHHHHHHHHTTSTTCCSGGGGCGGGCCCCCCEEEEECSSCCCGGGC
T ss_pred HHHHHHHHHHHHHhCCCCCHHHHhcccCCCCCCeEEEEeCCCchhhhhc
Confidence 888888776543110 0014689999997 5665443
No 12
>3jzd_A Iron-containing alcohol dehydrogenase; YP_298327.1, putative alcohol dehedrogenase, structural GENO joint center for structural genomics; HET: MSE NAD PG4 P6G PGE; 2.10A {Ralstonia eutropha}
Probab=81.48 E-value=3.5 Score=41.32 Aligned_cols=85 Identities=15% Similarity=0.165 Sum_probs=52.5
Q ss_pred ceEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEeeecCcceeecchhHHHHHHhcchhhhhcccCcceEEEEcCChhH
Q 011840 81 APMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTV 160 (476)
Q Consensus 81 ~~~lvivNP~SG~~~~~~~~~~l~~~L~~~~v~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Ivv~GGDGTv 160 (476)
++++|+..+.. ..+.+++.+.|......-+..+.|.+ .....++.++.+ + ..+.|.||++|| |++
T Consensus 37 ~r~liVtd~~~-----~~~~~~v~~~L~~~~~~~f~~v~~~p----~~~~v~~~~~~~----~-~~~~D~IIavGG-Gsv 101 (358)
T 3jzd_A 37 KRALVLCTPNQ-----QAEAERIADLLGPLSAGVYAGAVMHV----PIESARDATARA----R-EAGADCAVAVGG-GST 101 (358)
T ss_dssp SCEEEECCGGG-----HHHHHHHHHHHGGGEEEEECCCCTTC----BHHHHHHHHHHH----H-HHTCSEEEEEES-HHH
T ss_pred CeEEEEeCCcH-----HHHHHHHHHHhccCCEEEecCCcCCC----CHHHHHHHHHHh----h-ccCCCEEEEeCC-cHH
Confidence 67888877642 23567788888764321122233322 123344444332 2 235789999999 999
Q ss_pred HHHHHHHHhhhccCCCCCCcEEEecC
Q 011840 161 GWVLGSVGELNKQGREPVPPVAIIPL 186 (476)
Q Consensus 161 ~~vln~l~~~~~~~~~~~~plgiIPl 186 (476)
..+...+... ..+|+..||.
T Consensus 102 iD~aK~iA~~------~~~p~i~IPT 121 (358)
T 3jzd_A 102 TGLGKAIALE------TGMPIVAIPT 121 (358)
T ss_dssp HHHHHHHHHH------HCCCEEEEEC
T ss_pred HHHHHHHHhc------cCCCEEEEeC
Confidence 9988887653 3678999997
No 13
>3hl0_A Maleylacetate reductase; structur genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE NAD EPE; 1.60A {Agrobacterium tumefaciens str}
Probab=80.72 E-value=4.1 Score=40.71 Aligned_cols=84 Identities=17% Similarity=0.173 Sum_probs=52.6
Q ss_pred ceEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEE-eeecCcceeecchhHHHHHHhcchhhhhcccCcceEEEEcCChh
Q 011840 81 APMVVFINSRSGGRHGPELKERLQELMGKEQVFDL-SEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (476)
Q Consensus 81 ~~~lvivNP~SG~~~~~~~~~~l~~~L~~~~v~dl-~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Ivv~GGDGT 159 (476)
++++|+..+.. ..+.+++.+.|.... +.+ ..+.|.+ .....+++++.+ + ..+.|.||++|| |+
T Consensus 35 ~r~liVtd~~~-----~~~~~~v~~~L~~~~-~~v~~~v~~~p----~~~~v~~~~~~~----~-~~~~D~IIavGG-Gs 98 (353)
T 3hl0_A 35 SRALVLSTPQQ-----KGDAEALASRLGRLA-AGVFSEAAMHT----PVEVTKTAVEAY----R-AAGADCVVSLGG-GS 98 (353)
T ss_dssp CCEEEECCGGG-----HHHHHHHHHHHGGGE-EEEECCCCTTC----BHHHHHHHHHHH----H-HTTCSEEEEEES-HH
T ss_pred CEEEEEecCch-----hhHHHHHHHHHhhCC-cEEecCcCCCC----cHHHHHHHHHHH----h-ccCCCEEEEeCC-cH
Confidence 67888877642 235677888887642 222 2222322 123344444332 2 245789999999 99
Q ss_pred HHHHHHHHHhhhccCCCCCCcEEEecC
Q 011840 160 VGWVLGSVGELNKQGREPVPPVAIIPL 186 (476)
Q Consensus 160 v~~vln~l~~~~~~~~~~~~plgiIPl 186 (476)
+..+...+.-. ..+|+..||.
T Consensus 99 ~iD~aK~iA~~------~~~p~i~IPT 119 (353)
T 3hl0_A 99 TTGLGKAIALR------TDAAQIVIPT 119 (353)
T ss_dssp HHHHHHHHHHH------HCCEEEEEEC
T ss_pred HHHHHHHHHhc------cCCCEEEEeC
Confidence 99988887653 4688999997
No 14
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=72.71 E-value=25 Score=31.41 Aligned_cols=85 Identities=20% Similarity=0.235 Sum_probs=54.5
Q ss_pred ceEEEEEcCCCCCCChhHHHHHHHHhhhhcCe-eEEeeecCcceeecchhHHHHHHhcchhhhhcccCc-ceEEEEcCCh
Q 011840 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQK-MRIVVAGGDG 158 (476)
Q Consensus 81 ~~~lvivNP~SG~~~~~~~~~~l~~~L~~~~v-~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~-~~Ivv~GGDG 158 (476)
.++.||.=..|- -...++....|....+ ||+.+...+. .+..+.++++++. .++. -.|.++||.+
T Consensus 13 P~V~IimGS~SD----~~v~~~a~~~l~~~gi~~ev~V~saHR----~p~~l~~~~~~a~-----~~g~~ViIa~AG~aa 79 (173)
T 4grd_A 13 PLVGVLMGSSSD----WDVMKHAVAILQEFGVPYEAKVVSAHR----MPDEMFDYAEKAR-----ERGLRAIIAGAGGAA 79 (173)
T ss_dssp CSEEEEESSGGG----HHHHHHHHHHHHHTTCCEEEEECCTTT----SHHHHHHHHHHHT-----TTTCSEEEEEEESSC
T ss_pred CeEEEEeCcHhH----HHHHHHHHHHHHHcCCCEEEEEEcccc----CHHHHHHHHHHHH-----hcCCeEEEEeccccc
Confidence 346666644443 3456666666666554 8887765443 5566777777653 2333 4677899999
Q ss_pred hHHHHHHHHHhhhccCCCCCCcEEEecCC
Q 011840 159 TVGWVLGSVGELNKQGREPVPPVAIIPLG 187 (476)
Q Consensus 159 Tv~~vln~l~~~~~~~~~~~~plgiIPlG 187 (476)
-+--|+.++.. .|-||+ |.-
T Consensus 80 hLpgvvA~~t~--------~PVIgV-Pv~ 99 (173)
T 4grd_A 80 HLPGMLAAKTT--------VPVLGV-PVA 99 (173)
T ss_dssp CHHHHHHHHCC--------SCEEEE-EEC
T ss_pred cchhhheecCC--------CCEEEE-EcC
Confidence 99999999863 455665 543
No 15
>1oj7_A Hypothetical oxidoreductase YQHD; structural genomics; HET: NZQ; 2.0A {Escherichia coli} SCOP: e.22.1.2
Probab=71.79 E-value=8.5 Score=39.05 Aligned_cols=102 Identities=13% Similarity=0.201 Sum_probs=56.0
Q ss_pred ceEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEeeecCcceeecchhHHHHHHhcchhhhhcccCcceEEEEcCChhH
Q 011840 81 APMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTV 160 (476)
Q Consensus 81 ~~~lvivNP~SG~~~~~~~~~~l~~~L~~~~v~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Ivv~GGDGTv 160 (476)
++++|+..+.+-.. ..+.+++.+.|....++-+..+.|.+ ......++++.+. ..+.|.||++|| |++
T Consensus 51 ~r~liVtd~~~~~~--~g~~~~v~~~L~g~~~~~f~~v~~~p----~~~~v~~~~~~~~-----~~~~D~IIavGG-Gsv 118 (408)
T 1oj7_A 51 ARVLITYGGGSVKK--TGVLDQVLDALKGMDVLEFGGIEPNP----AYETLMNAVKLVR-----EQKVTFLLAVGG-GSV 118 (408)
T ss_dssp CEEEEEECSSHHHH--HSHHHHHHHHTTTSEEEEECCCCSSC----BHHHHHHHHHHHH-----HHTCCEEEEEES-HHH
T ss_pred CEEEEEECCchhhh--ccHHHHHHHHhCCCEEEEeCCcCCCc----CHHHHHHHHHHHH-----HcCCCEEEEeCC-chH
Confidence 78888886543211 12567777777521112222222222 2233444443322 135689999999 888
Q ss_pred HHHHHHHHhhhcc---------------CCCCCCcEEEecC--CCCccccc
Q 011840 161 GWVLGSVGELNKQ---------------GREPVPPVAIIPL--GTGNDLSR 194 (476)
Q Consensus 161 ~~vln~l~~~~~~---------------~~~~~~plgiIPl--GTgNdfar 194 (476)
..+...+.-.-.. .....+|+..||. |||-....
T Consensus 119 iD~AK~iA~~~~~~~~~~~~d~~~~~~~~~~~~~p~i~IPTTagtgSevt~ 169 (408)
T 1oj7_A 119 LDGTKFIAAAANYPENIDPWHILQTGGKEIKSAIPMGCVLTLPATGSESNA 169 (408)
T ss_dssp HHHHHHHHHHTTSCTTSCTTHHHHTTTTTCCCCCCEEEEESSCSSCGGGSS
T ss_pred HHHHHHHHHHHhCCCCCCHHHHhccccCcCCCCCCEEEEeCCCchhHHhCC
Confidence 8888777543110 0114689999998 66554443
No 16
>3uhj_A Probable glycerol dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.34A {Sinorhizobium meliloti}
Probab=70.43 E-value=8.8 Score=38.84 Aligned_cols=85 Identities=16% Similarity=0.159 Sum_probs=49.7
Q ss_pred ceEEEEEcCCCCCCChhHHHHHHHHhhhhcCe-eEEeeecCcceeecchhHHHHHHhcchhhhhcccCcceEEEEcCChh
Q 011840 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (476)
Q Consensus 81 ~~~lvivNP~SG~~~~~~~~~~l~~~L~~~~v-~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Ivv~GGDGT 159 (476)
++++||..+..- ....+++.+.|.. .+ +.+....+++ .....+++++.+. ..+.|.||++|| |+
T Consensus 53 ~r~liVtd~~~~----~~~~~~v~~~L~~-g~~~~~~~~~~~p----~~~~v~~~~~~~~-----~~~~d~IIavGG-Gs 117 (387)
T 3uhj_A 53 KRALVLIDRVLF----DALSERIGKSCGD-SLDIRFERFGGEC----CTSEIERVRKVAI-----EHGSDILVGVGG-GK 117 (387)
T ss_dssp SEEEEEECTTTH----HHHHHHC-------CCEEEEEECCSSC----SHHHHHHHHHHHH-----HHTCSEEEEESS-HH
T ss_pred CEEEEEECchHH----HHHHHHHHHHHHc-CCCeEEEEcCCCC----CHHHHHHHHHHHh-----hcCCCEEEEeCC-cH
Confidence 788999887654 2356777777765 31 2222233322 1234444444332 135689999999 99
Q ss_pred HHHHHHHHHhhhccCCCCCCcEEEecC
Q 011840 160 VGWVLGSVGELNKQGREPVPPVAIIPL 186 (476)
Q Consensus 160 v~~vln~l~~~~~~~~~~~~plgiIPl 186 (476)
+..++..+.-. ..+|+-.||.
T Consensus 118 ~~D~AK~iA~~------~~~p~i~IPT 138 (387)
T 3uhj_A 118 TADTAKIVAID------TGARIVIAPT 138 (387)
T ss_dssp HHHHHHHHHHH------TTCEEEECCS
T ss_pred HHHHHHHHHHh------cCCCEEEecC
Confidence 99998888653 4689999998
No 17
>3iv7_A Alcohol dehydrogenase IV; NP_602249.1, iron-containing alcohol dehydrogenase, structur genomics, joint center for structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=70.01 E-value=4.7 Score=40.48 Aligned_cols=83 Identities=17% Similarity=0.233 Sum_probs=51.1
Q ss_pred ceEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEeeecCcceeecchhHHHHHHhcchhhhhcccCcceEEEEcCChhH
Q 011840 81 APMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTV 160 (476)
Q Consensus 81 ~~~lvivNP~SG~~~~~~~~~~l~~~L~~~~v~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Ivv~GGDGTv 160 (476)
++++|+..+.. ..+.+++.+.|... +.+..+.|.. .....++.++.+ + ..+.|.||++|| |++
T Consensus 38 ~rvliVtd~~~-----~~~~~~v~~~L~~~--~~f~~v~~~p----~~~~v~~~~~~~----~-~~~~D~IIavGG-Gs~ 100 (364)
T 3iv7_A 38 AKVMVIAGERE-----MSIAHKVASEIEVA--IWHDEVVMHV----PIEVAERARAVA----T-DNEIDLLVCVGG-GST 100 (364)
T ss_dssp SSEEEECCGGG-----HHHHHHHTTTSCCS--EEECCCCTTC----BHHHHHHHHHHH----H-HTTCCEEEEEES-HHH
T ss_pred CEEEEEECCCH-----HHHHHHHHHHcCCC--EEEcceecCC----CHHHHHHHHHHH----H-hcCCCEEEEeCC-cHH
Confidence 67888877642 23556777777632 2223333332 123444444333 2 246789999999 999
Q ss_pred HHHHHHHHhhhccCCCCCCcEEEecC
Q 011840 161 GWVLGSVGELNKQGREPVPPVAIIPL 186 (476)
Q Consensus 161 ~~vln~l~~~~~~~~~~~~plgiIPl 186 (476)
..+...+... ..+|+..||.
T Consensus 101 iD~aK~iA~~------~~~P~i~IPT 120 (364)
T 3iv7_A 101 IGLAKAIAMT------TALPIVAIPT 120 (364)
T ss_dssp HHHHHHHHHH------HCCCEEEEEC
T ss_pred HHHHHHHHhc------cCCCEEEEcC
Confidence 9988887653 3688999997
No 18
>3bfj_A 1,3-propanediol oxidoreductase; opportunistic pathogens, decamer, structural genomics,struct proteomics in europe, spine; 2.70A {Klebsiella pneumoniae}
Probab=69.93 E-value=10 Score=38.11 Aligned_cols=101 Identities=14% Similarity=0.201 Sum_probs=55.5
Q ss_pred ceEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEE---eeecCcceeecchhHHHHHHhcchhhhhcccCcceEEEEcCC
Q 011840 81 APMVVFINSRSGGRHGPELKERLQELMGKEQVFDL---SEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGD 157 (476)
Q Consensus 81 ~~~lvivNP~SG~~~~~~~~~~l~~~L~~~~v~dl---~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Ivv~GGD 157 (476)
++++|+..+..-... ..+.+++.+.|.... +++ ....|.+ .....+++++.+. ..+.|.||++||
T Consensus 34 ~~~livtd~~~~~~~-~g~~~~v~~~L~~~g-~~~~~~~~~~~~p----~~~~v~~~~~~~~-----~~~~d~IIavGG- 101 (387)
T 3bfj_A 34 KKALLVTDKGLRAIK-DGAVDKTLHYLREAG-IEVAIFDGVEPNP----KDTNVRDGLAVFR-----REQCDIIVTVGG- 101 (387)
T ss_dssp SEEEEECCTTTC--C-CSSHHHHHHHHHHTT-CEEEEECCCCSSC----BHHHHHHHHHHHH-----HTTCCEEEEEES-
T ss_pred CEEEEEECcchhhcc-chHHHHHHHHHHHcC-CeEEEECCccCCC----CHHHHHHHHHHHH-----hcCCCEEEEeCC-
Confidence 788999887654320 014556666665432 222 2223332 2234444444332 245689999998
Q ss_pred hhHHHHHHHHHhhhc------------cCCCCCCcEEEecC--CCCcccc
Q 011840 158 GTVGWVLGSVGELNK------------QGREPVPPVAIIPL--GTGNDLS 193 (476)
Q Consensus 158 GTv~~vln~l~~~~~------------~~~~~~~plgiIPl--GTgNdfa 193 (476)
|++..+...+.-.-. ......+|+..||. |||-...
T Consensus 102 Gsv~D~aK~iA~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTT~gtgSevt 151 (387)
T 3bfj_A 102 GSPHDCGKGIGIAATHEGDLYQYAGIETLTNPLPPIVAVNTTAGTASEVT 151 (387)
T ss_dssp HHHHHHHHHHHHHHHSSSCSGGGCBSSCCCSCCCCEEEEECSTTCCGGGC
T ss_pred cchhhHHHHHHHHHhCCCCHHHHhcccccCCCCCCEEEEeCCCCcccccc
Confidence 888888777654200 00114689999998 6654443
No 19
>1vlj_A NADH-dependent butanol dehydrogenase; TM0820, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: NAP; 1.78A {Thermotoga maritima} SCOP: e.22.1.2
Probab=67.71 E-value=18 Score=36.66 Aligned_cols=100 Identities=17% Similarity=0.229 Sum_probs=55.2
Q ss_pred ceEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEe---eecCcceeecchhHHHHHHhcchhhhhcccCcceEEEEcCC
Q 011840 81 APMVVFINSRSGGRHGPELKERLQELMGKEQVFDLS---EVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGD 157 (476)
Q Consensus 81 ~~~lvivNP~SG~~~~~~~~~~l~~~L~~~~v~dl~---~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Ivv~GGD 157 (476)
++++|+..+.+-... .+.+++.+.|.... +++. .+.|.+ .....+++++.+. ..+.|.||++||
T Consensus 44 ~r~liVtd~~~~~~~--g~~~~v~~~L~~~g-~~~~~f~~v~~~p----~~~~v~~~~~~~~-----~~~~D~IIavGG- 110 (407)
T 1vlj_A 44 RKVLFLYGGGSIKKN--GVYDQVVDSLKKHG-IEWVEVSGVKPNP----VLSKVHEAVEVAK-----KEKVEAVLGVGG- 110 (407)
T ss_dssp CEEEEEECSSHHHHS--SHHHHHHHHHHHTT-CEEEEECCCCSSC----BHHHHHHHHHHHH-----HTTCSEEEEEES-
T ss_pred CeEEEEECchHHhhc--cHHHHHHHHHHHcC-CeEEEecCccCCC----CHHHHHHHHHHHH-----hcCCCEEEEeCC-
Confidence 688888864332111 15667777776432 3322 122222 2234444444332 245689999999
Q ss_pred hhHHHHHHHHHhhh------------ccCCCCCCcEEEecC--CCCcccc
Q 011840 158 GTVGWVLGSVGELN------------KQGREPVPPVAIIPL--GTGNDLS 193 (476)
Q Consensus 158 GTv~~vln~l~~~~------------~~~~~~~~plgiIPl--GTgNdfa 193 (476)
|++..++..+.-.- .......+|+..||. |||--..
T Consensus 111 GsviD~AK~iA~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTTagtgSevt 160 (407)
T 1vlj_A 111 GSVVDSAKAVAAGALYEGDIWDAFIGKYQIEKALPIFDVLTISATGTEMN 160 (407)
T ss_dssp HHHHHHHHHHHHHTTCSSCGGGGGGTSCCCCCCCCEEEEECSCSSCGGGS
T ss_pred hhHHHHHHHHHHHHhCCCCHHHHhcccccCCCCCCEEEEeCCCCcchhhc
Confidence 88888887765421 000124689999997 5544433
No 20
>1sg6_A Pentafunctional AROM polypeptide; shikimate pathway, aromatic amino acid biosynthesis, DHQS, O form J, domain movement, cyclase, lyase; HET: NAD; 1.70A {Emericella nidulans} SCOP: e.22.1.1 PDB: 1nr5_A* 1nrx_A* 1nua_A 1nva_A* 1nvb_A* 1nvd_A* 1nve_A* 1nvf_A* 1dqs_A*
Probab=65.56 E-value=5.8 Score=40.18 Aligned_cols=102 Identities=16% Similarity=0.135 Sum_probs=58.0
Q ss_pred CceEEEEEcCCCCCCChhHHHHHHHHhhhhcC-----eeEE--eeecCcceeecchhHHHHHHhcchhhhhc--ccCcce
Q 011840 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQ-----VFDL--SEVKPHEFVQYGLACLEKLAELGDFCAKD--TRQKMR 150 (476)
Q Consensus 80 ~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~~-----v~dl--~~~~p~~~~t~~~~~~~~la~~~~~~a~~--~~~~~~ 150 (476)
.++++|+.++... ....+++.+.|.... .+.+ ....+.+. .......+++.+.+.+. . ....+.
T Consensus 36 ~~k~liVtd~~v~----~~~~~~v~~~L~~~~~~~~~g~~~~~~~~~~gE~-~k~~~~v~~~~~~~~~~--~~~~~r~d~ 108 (393)
T 1sg6_A 36 STTYVLVTDTNIG----SIYTPSFEEAFRKRAAEITPSPRLLIYNRPPGEV-SKSRQTKADIEDWMLSQ--NPPCGRDTV 108 (393)
T ss_dssp CSEEEEEEEHHHH----HHHHHHHHHHHHHHHHHSSSCCEEEEEEECSSGG-GSSHHHHHHHHHHHHTS--SSCCCTTCE
T ss_pred CCeEEEEECCcHH----HHHHHHHHHHHHhhhccccCCceeEEEEeCCCCC-CCCHHHHHHHHHHHHHc--CCCCCCCCE
Confidence 3689999886432 225566666665430 1232 12222110 11223344444433210 1 123488
Q ss_pred EEEEcCChhHHHHHHHHHhhhccCCCCCCcEEEecC--CCCcccc
Q 011840 151 IVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPL--GTGNDLS 193 (476)
Q Consensus 151 Ivv~GGDGTv~~vln~l~~~~~~~~~~~~plgiIPl--GTgNdfa 193 (476)
||++|| |++..++..+...- ...+|+-.||. ||+.|-+
T Consensus 109 iIalGG-Gsv~D~ak~~Aa~~----~rgip~i~IPTTlla~~das 148 (393)
T 1sg6_A 109 VIALGG-GVIGDLTGFVASTY----MRGVRYVQVPTTLLAMVDSS 148 (393)
T ss_dssp EEEEES-HHHHHHHHHHHHHG----GGCCEEEEEECSHHHHHTTT
T ss_pred EEEECC-cHHHHHHHHHHHHh----cCCCCEEEECCchhhhhhcC
Confidence 999998 89998888776422 14789999999 8998874
No 21
>2gru_A 2-deoxy-scyllo-inosose synthase; aminoglycoside, 2-deoxystreptamine, dehydroquinate synthase, lyase; HET: NAD EXO CAK; 2.15A {Bacillus circulans} PDB: 2d2x_A*
Probab=62.74 E-value=9.2 Score=38.27 Aligned_cols=95 Identities=18% Similarity=0.176 Sum_probs=54.0
Q ss_pred CceEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEeeecCcceeecchhHHHHHHhcchhhhhcccCcceEEEEcCChh
Q 011840 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (476)
Q Consensus 80 ~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~~v~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Ivv~GGDGT 159 (476)
.++++|+.++.... ...+++.+.|...-.+........+ -........++.+.+.+ ......+.||++|| |+
T Consensus 34 ~~k~liVtd~~v~~----~~~~~v~~~L~~~~~~~~~~~~~ge-~~k~~~~v~~~~~~~~~--~~~~r~d~iIalGG-Gs 105 (368)
T 2gru_A 34 FDQYIMISDSGVPD----SIVHYAAEYFGKLAPVHILRFQGGE-EYKTLSTVTNLQERAIA--LGANRRTAIVAVGG-GL 105 (368)
T ss_dssp CSEEEEEEETTSCH----HHHHHHHHHHTTTSCEEEEEECCSG-GGCSHHHHHHHHHHHHH--TTCCTTEEEEEEES-HH
T ss_pred CCEEEEEECCcHHH----HHHHHHHHHHHhccceeEEEeCCCC-CCCCHHHHHHHHHHHHh--cCCCCCcEEEEECC-hH
Confidence 47899999976642 2567777777643012211111111 01122333444332221 01234688999998 99
Q ss_pred HHHHHHHHHhhhccCCCCCCcEEEecC
Q 011840 160 VGWVLGSVGELNKQGREPVPPVAIIPL 186 (476)
Q Consensus 160 v~~vln~l~~~~~~~~~~~~plgiIPl 186 (476)
+..+...+...- ...+|+-.||.
T Consensus 106 v~D~ak~~Aa~~----~rgip~i~IPT 128 (368)
T 2gru_A 106 TGNVAGVAAGMM----FRGIALIHVPT 128 (368)
T ss_dssp HHHHHHHHHHHB----TTCCEEEEEEC
T ss_pred HHHHHHHHHHHh----cCCCCEEEECC
Confidence 999988876432 25789999998
No 22
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=57.80 E-value=46 Score=29.64 Aligned_cols=77 Identities=18% Similarity=0.198 Sum_probs=48.6
Q ss_pred CceEEEEEcCCCCCCChhHHHHHHHHhhhhcCe-eEEeeecCcceeecchhHHHHHHhcchhhhhcccC-cceEEEEcCC
Q 011840 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQ-KMRIVVAGGD 157 (476)
Q Consensus 80 ~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~~v-~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~-~~~Ivv~GGD 157 (476)
++|.+.|+= |+..--...++....|....+ ||+.+...+ +.+..+.++++++. .++ .-.|.++||.
T Consensus 10 ~~~~V~Iim---GS~SD~~v~~~a~~~L~~~Gi~~dv~V~SaH----R~p~~l~~~~~~a~-----~~g~~ViIa~AG~a 77 (170)
T 1xmp_A 10 MKSLVGVIM---GSTSDWETMKYACDILDELNIPYEKKVVSAH----RTPDYMFEYAETAR-----ERGLKVIIAGAGGA 77 (170)
T ss_dssp -CCSEEEEE---SSGGGHHHHHHHHHHHHHTTCCEEEEECCTT----TSHHHHHHHHHHTT-----TTTCCEEEEEEESS
T ss_pred CCCcEEEEE---CcHHHHHHHHHHHHHHHHcCCCEEEEEEecc----CCHHHHHHHHHHHH-----hCCCcEEEEECCch
Confidence 455554442 333334566666667765553 888776543 35667788877654 122 3467889999
Q ss_pred hhHHHHHHHHH
Q 011840 158 GTVGWVLGSVG 168 (476)
Q Consensus 158 GTv~~vln~l~ 168 (476)
+-+--++.++.
T Consensus 78 a~LpgvvA~~t 88 (170)
T 1xmp_A 78 AHLPGMVAAKT 88 (170)
T ss_dssp CCHHHHHHTTC
T ss_pred hhhHHHHHhcc
Confidence 99999998875
No 23
>3ox4_A Alcohol dehydrogenase 2; iron, NAD, oxidoreductase; HET: NAD; 2.00A {Zymomonas mobilis} PDB: 3owo_A*
Probab=57.31 E-value=34 Score=34.25 Aligned_cols=101 Identities=11% Similarity=0.207 Sum_probs=56.7
Q ss_pred CceEEEEEcCCCCCCChhHHHHHHHHhhhhcCe-e-EEeeecCcceeecchhHHHHHHhcchhhhhcccCcceEEEEcCC
Q 011840 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQV-F-DLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGD 157 (476)
Q Consensus 80 ~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~~v-~-dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Ivv~GGD 157 (476)
.++++|+..+.-- ...+.+++.+.|..... + .+....|.+ .....+++++.+. ..+.|.||++||
T Consensus 31 ~~~~liVtd~~~~---~~g~~~~v~~~L~~~gi~~~~~~~v~~~p----~~~~v~~~~~~~~-----~~~~D~IIavGG- 97 (383)
T 3ox4_A 31 FKNALIVSDAFMN---KSGVVKQVADLLKAQGINSAVYDGVMPNP----TVTAVLEGLKILK-----DNNSDFVISLGG- 97 (383)
T ss_dssp CCEEEEEEEHHHH---HTTHHHHHHHHHHTTTCEEEEEEEECSSC----BHHHHHHHHHHHH-----HHTCSEEEEEES-
T ss_pred CCEEEEEECCchh---hCchHHHHHHHHHHcCCeEEEECCccCCC----CHHHHHHHHHHHH-----hcCcCEEEEeCC-
Confidence 4688888875321 11256777777875431 1 122233332 2234444444332 235689999999
Q ss_pred hhHHHHHHHHHhhhc------------cCCCCCCcEEEecC--CCCcccc
Q 011840 158 GTVGWVLGSVGELNK------------QGREPVPPVAIIPL--GTGNDLS 193 (476)
Q Consensus 158 GTv~~vln~l~~~~~------------~~~~~~~plgiIPl--GTgNdfa 193 (476)
|++..+...+.-.-. ......+|+..||. |||-...
T Consensus 98 Gsv~D~aK~ia~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTTagtgSe~t 147 (383)
T 3ox4_A 98 GSPHDCAKAIALVATNGGEVKDYEGIDKSKKPALPLMSINTTAGTASEMT 147 (383)
T ss_dssp HHHHHHHHHHHHHHHSCSSGGGGCEESCCSSCCSCEEEEECSSSCCTTTC
T ss_pred cHHHHHHHHHHHHHhCCCCHHHHhcccccccCCCCEEEEeCCCCchhhcC
Confidence 888888776643210 00123689999998 5554443
No 24
>3okf_A 3-dehydroquinate synthase; structural genomics, center for structural genomics of infec diseases, csgid, NAD, lyase; HET: NAD; 2.50A {Vibrio cholerae o1 biovar eltor}
Probab=56.84 E-value=20 Score=36.25 Aligned_cols=95 Identities=15% Similarity=0.190 Sum_probs=55.2
Q ss_pred CCceEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEe--eecCcceeecchhHHHHHHhcchhhhhcccCcceEEEEcC
Q 011840 79 PEAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLS--EVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGG 156 (476)
Q Consensus 79 ~~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~~v~dl~--~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Ivv~GG 156 (476)
..++++|+.++... ....+++.+.|.... +++. .....+ -.......+++.+.+.+. .....+.||++||
T Consensus 61 ~~~rvlIVtd~~v~----~~~~~~v~~~L~~~g-~~~~~~~~~~gE-~~kt~~~v~~~~~~l~~~--~~~R~d~IIAvGG 132 (390)
T 3okf_A 61 AKQKVVIVTNHTVA----PLYAPAIISLLDHIG-CQHALLELPDGE-QYKTLETFNTVMSFLLEH--NYSRDVVVIALGG 132 (390)
T ss_dssp TTCEEEEEEETTTH----HHHHHHHHHHHHHHT-CEEEEEEECSSG-GGCBHHHHHHHHHHHHHT--TCCTTCEEEEEES
T ss_pred CCCEEEEEECCcHH----HHHHHHHHHHHHHcC-CeEEEEEECCCc-CCchHHHHHHHHHHHHhc--CCCcCcEEEEECC
Confidence 45789999997654 336777888886543 3322 111111 001223444444433210 1233478999988
Q ss_pred ChhHHHHHHHHHhhhccCCCCCCcEEEecC
Q 011840 157 DGTVGWVLGSVGELNKQGREPVPPVAIIPL 186 (476)
Q Consensus 157 DGTv~~vln~l~~~~~~~~~~~~plgiIPl 186 (476)
|++..++..+.... ...+|+..||.
T Consensus 133 -Gsv~D~ak~~Aa~~----~rgip~I~IPT 157 (390)
T 3okf_A 133 -GVIGDLVGFAAACY----QRGVDFIQIPT 157 (390)
T ss_dssp -HHHHHHHHHHHHHB----TTCCEEEEEEC
T ss_pred -cHHhhHHHHHHHHh----cCCCCEEEeCC
Confidence 99999888775321 25789999997
No 25
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=54.84 E-value=1.1e+02 Score=27.14 Aligned_cols=63 Identities=16% Similarity=0.164 Sum_probs=42.5
Q ss_pred hHHHHHHHHhhhhcCe-eEEeeecCcceeecchhHHHHHHhcchhhhhcccC-cceEEEEcCChhHHHHHHHHH
Q 011840 97 PELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQ-KMRIVVAGGDGTVGWVLGSVG 168 (476)
Q Consensus 97 ~~~~~~l~~~L~~~~v-~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~-~~~Ivv~GGDGTv~~vln~l~ 168 (476)
....++....|....+ ||+.+...+ +.+..+.++++++. .++ .-.|.++|+.+-+--++.++.
T Consensus 18 ~~v~~~a~~~l~~~gi~~ev~V~SaH----Rtp~~l~~~~~~~~-----~~g~~ViIa~AG~aa~LpgvvA~~t 82 (166)
T 3oow_A 18 WSTMKECCDILDNLGIGYECEVVSAH----RTPDKMFDYAETAK-----ERGLKVIIAGAGGAAHLPGMVAAKT 82 (166)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCTT----TCHHHHHHHHHHTT-----TTTCCEEEEEECSSCCHHHHHHHTC
T ss_pred HHHHHHHHHHHHHcCCCEEEEEEcCc----CCHHHHHHHHHHHH-----hCCCcEEEEECCcchhhHHHHHhcc
Confidence 4566666667765553 888776543 25566777776653 122 346778899999999998885
No 26
>1jq5_A Glycerol dehydrogenase; oxidoreductase, NAD, glycerol metabolism; HET: NAD; 1.70A {Geobacillus stearothermophilus} SCOP: e.22.1.2 PDB: 1jpu_A* 1jqa_A*
Probab=54.43 E-value=23 Score=35.17 Aligned_cols=85 Identities=13% Similarity=0.126 Sum_probs=52.4
Q ss_pred ceEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEE--eeecCcceeecchhHHHHHHhcchhhhhcccCcceEEEEcCCh
Q 011840 81 APMVVFINSRSGGRHGPELKERLQELMGKEQVFDL--SEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (476)
Q Consensus 81 ~~~lvivNP~SG~~~~~~~~~~l~~~L~~~~v~dl--~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Ivv~GGDG 158 (476)
++++|+..+.+-. .+.+++.+.|.... +++ ....+++ .....+++++.+ + ..+.|.||++|| |
T Consensus 32 ~~~livtd~~~~~----~~~~~v~~~L~~~g-~~~~~~~~~ge~----~~~~v~~~~~~~----~-~~~~d~IIavGG-G 96 (370)
T 1jq5_A 32 NKTVVIADEIVWK----IAGHTIVNELKKGN-IAAEEVVFSGEA----SRNEVERIANIA----R-KAEAAIVIGVGG-G 96 (370)
T ss_dssp SEEEEEECHHHHH----HTHHHHHHHHHTTT-CEEEEEECCSSC----BHHHHHHHHHHH----H-HTTCSEEEEEES-H
T ss_pred CeEEEEEChHHHH----HHHHHHHHHHHHcC-CeEEEEeeCCCC----CHHHHHHHHHHH----H-hcCCCEEEEeCC-h
Confidence 7899998765532 25667777776533 332 2222211 113344444332 2 235689999999 8
Q ss_pred hHHHHHHHHHhhhccCCCCCCcEEEecC
Q 011840 159 TVGWVLGSVGELNKQGREPVPPVAIIPL 186 (476)
Q Consensus 159 Tv~~vln~l~~~~~~~~~~~~plgiIPl 186 (476)
++..+...+.-. ..+|+..||.
T Consensus 97 sv~D~aK~iA~~------~~~p~i~IPT 118 (370)
T 1jq5_A 97 KTLDTAKAVADE------LDAYIVIVPT 118 (370)
T ss_dssp HHHHHHHHHHHH------HTCEEEEEES
T ss_pred HHHHHHHHHHHh------cCCCEEEecc
Confidence 999988887643 3689999998
No 27
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=54.20 E-value=78 Score=28.27 Aligned_cols=75 Identities=17% Similarity=0.192 Sum_probs=48.6
Q ss_pred eEEEEEcCCCCCCChhHHHHHHHHhhhhcCe-eEEeeecCcceeecchhHHHHHHhcchhhhhcccC-cceEEEEcCChh
Q 011840 82 PMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQ-KMRIVVAGGDGT 159 (476)
Q Consensus 82 ~~lvivNP~SG~~~~~~~~~~l~~~L~~~~v-~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~-~~~Ivv~GGDGT 159 (476)
++.||.=..| -....++....|+...+ ||+.+...+ +.+..+.++++++. .++ .-.|.++|+.+-
T Consensus 14 ~V~IimGS~S----D~~v~~~a~~~L~~~Gi~~ev~V~SaH----R~p~~~~~~~~~a~-----~~g~~ViIa~AG~aa~ 80 (174)
T 3kuu_A 14 KIAIVMGSKS----DWATMQFAADVLTTLNVPFHVEVVSAH----RTPDRLFSFAEQAE-----ANGLHVIIAGNGGAAH 80 (174)
T ss_dssp CEEEEESSGG----GHHHHHHHHHHHHHTTCCEEEEECCTT----TCHHHHHHHHHHTT-----TTTCSEEEEEEESSCC
T ss_pred cEEEEECcHH----HHHHHHHHHHHHHHcCCCEEEEEEccc----CCHHHHHHHHHHHH-----hCCCcEEEEECChhhh
Confidence 3556553333 23456666666665543 888776543 35677788877654 122 356888899999
Q ss_pred HHHHHHHHHh
Q 011840 160 VGWVLGSVGE 169 (476)
Q Consensus 160 v~~vln~l~~ 169 (476)
+--++.++..
T Consensus 81 LpgvvA~~t~ 90 (174)
T 3kuu_A 81 LPGMLAAKTL 90 (174)
T ss_dssp HHHHHHHTCS
T ss_pred hHHHHHhccC
Confidence 9999998863
No 28
>3ce9_A Glycerol dehydrogenase; NP_348253.1, 3-dehydroquinate syntha structural genomics, joint center for structural genomics; HET: MSE; 2.37A {Clostridium acetobutylicum atcc 824}
Probab=53.59 E-value=20 Score=35.35 Aligned_cols=84 Identities=10% Similarity=0.116 Sum_probs=52.2
Q ss_pred ceEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEeee--cCcceeecchhHHHHHHhcchhhhhcccCcceEEEEcCCh
Q 011840 81 APMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSEV--KPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (476)
Q Consensus 81 ~~~lvivNP~SG~~~~~~~~~~l~~~L~~~~v~dl~~~--~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Ivv~GGDG 158 (476)
++++|+..+..-. ...+++.+.|.... +++... .|.. .....+++ +.+ ++ .+.|.||++|| |
T Consensus 35 ~~~livtd~~~~~----~~~~~v~~~L~~~g-~~~~~~~~~~~~----~~~~v~~~-~~~----~~-~~~d~IIavGG-G 98 (354)
T 3ce9_A 35 KRVSLYFGEGIYE----LFGETIEKSIKSSN-IEIEAVETVKNI----DFDEIGTN-AFK----IP-AEVDALIGIGG-G 98 (354)
T ss_dssp SEEEEEEETTHHH----HHHHHHHHHHHTTT-CEEEEEEEECCC----BHHHHHHH-HTT----SC-TTCCEEEEEES-H
T ss_pred CeEEEEECccHHH----HHHHHHHHHHHHcC-CeEEEEecCCCC----CHHHHHHH-HHh----hh-cCCCEEEEECC-h
Confidence 5899998875532 35677777776532 222111 2322 22334444 332 22 45689999998 8
Q ss_pred hHHHHHHHHHhhhccCCCCCCcEEEecC
Q 011840 159 TVGWVLGSVGELNKQGREPVPPVAIIPL 186 (476)
Q Consensus 159 Tv~~vln~l~~~~~~~~~~~~plgiIPl 186 (476)
++..+...+.-. ..+|+..||.
T Consensus 99 sv~D~aK~vA~~------~~~p~i~IPT 120 (354)
T 3ce9_A 99 KAIDAVKYMAFL------RKLPFISVPT 120 (354)
T ss_dssp HHHHHHHHHHHH------HTCCEEEEES
T ss_pred HHHHHHHHHHhh------cCCCEEEecC
Confidence 999888887643 3689999998
No 29
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=52.27 E-value=74 Score=28.11 Aligned_cols=75 Identities=16% Similarity=0.218 Sum_probs=48.4
Q ss_pred eEEEEEcCCCCCCChhHHHHHHHHhhhhcCe-eEEeeecCcceeecchhHHHHHHhcchhhhhcccC-cceEEEEcCChh
Q 011840 82 PMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQ-KMRIVVAGGDGT 159 (476)
Q Consensus 82 ~~lvivNP~SG~~~~~~~~~~l~~~L~~~~v-~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~-~~~Ivv~GGDGT 159 (476)
++.||.=..| -....++....|....+ ||+.+...+ +.+..+.++++++. .++ .-.|.++|+.+-
T Consensus 5 ~V~Iimgs~S----D~~v~~~a~~~l~~~gi~~ev~V~SaH----R~p~~~~~~~~~a~-----~~g~~ViIa~AG~aa~ 71 (163)
T 3ors_A 5 KVAVIMGSSS----DWKIMQESCNMLDYFEIPYEKQVVSAH----RTPKMMVQFASEAR-----ERGINIIIAGAGGAAH 71 (163)
T ss_dssp CEEEEESCGG----GHHHHHHHHHHHHHTTCCEEEEECCTT----TSHHHHHHHHHHTT-----TTTCCEEEEEEESSCC
T ss_pred eEEEEECcHH----HHHHHHHHHHHHHHcCCCEEEEEECCc----CCHHHHHHHHHHHH-----hCCCcEEEEECCchhh
Confidence 3555553333 23456666666665443 888776543 35667778877654 122 356888899999
Q ss_pred HHHHHHHHHh
Q 011840 160 VGWVLGSVGE 169 (476)
Q Consensus 160 v~~vln~l~~ 169 (476)
+--++.++..
T Consensus 72 LpgvvA~~t~ 81 (163)
T 3ors_A 72 LPGMVASLTT 81 (163)
T ss_dssp HHHHHHHHCS
T ss_pred hHHHHHhccC
Confidence 9999998863
No 30
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=50.59 E-value=73 Score=28.66 Aligned_cols=78 Identities=17% Similarity=0.224 Sum_probs=49.1
Q ss_pred ceEEEEEcCCCCCCChhHHHHHHHHhhhhcCe-eEEeeecCcceeecchhHHHHHHhcchhhhhcccCcceEEEEcCChh
Q 011840 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (476)
Q Consensus 81 ~~~lvivNP~SG~~~~~~~~~~l~~~L~~~~v-~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Ivv~GGDGT 159 (476)
-|.+.|+= |+..-....++....|....+ ||+.+...+ +.+..+.++++++.+ ..-.-.|.++||.+-
T Consensus 13 ~~~V~Iim---GS~SD~~v~~~a~~~L~~~Gi~~dv~V~SaH----R~p~~l~~~~~~a~~----~g~~ViIa~AG~aa~ 81 (183)
T 1o4v_A 13 VPRVGIIM---GSDSDLPVMKQAAEILEEFGIDYEITIVSAH----RTPDRMFEYAKNAEE----RGIEVIIAGAGGAAH 81 (183)
T ss_dssp -CEEEEEE---SCGGGHHHHHHHHHHHHHTTCEEEEEECCTT----TCHHHHHHHHHHTTT----TTCCEEEEEEESSCC
T ss_pred CCeEEEEe---ccHHHHHHHHHHHHHHHHcCCCeEEEEEccc----CCHHHHHHHHHHHHh----CCCcEEEEecCcccc
Confidence 34444442 333334566677777766553 888776543 356677888876541 112346888999999
Q ss_pred HHHHHHHHHh
Q 011840 160 VGWVLGSVGE 169 (476)
Q Consensus 160 v~~vln~l~~ 169 (476)
+--|+.++..
T Consensus 82 LpgvvA~~t~ 91 (183)
T 1o4v_A 82 LPGMVASITH 91 (183)
T ss_dssp HHHHHHHHCS
T ss_pred cHHHHHhccC
Confidence 9999998863
No 31
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=49.90 E-value=1e+02 Score=27.11 Aligned_cols=65 Identities=9% Similarity=0.108 Sum_probs=43.3
Q ss_pred hHHHHHHHHhhhhcCe-eEEeeecCcceeecchhHHHHHHhcchhhhhcccC-cceEEEEcCChhHHHHHHHHHh
Q 011840 97 PELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQ-KMRIVVAGGDGTVGWVLGSVGE 169 (476)
Q Consensus 97 ~~~~~~l~~~L~~~~v-~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~-~~~Ivv~GGDGTv~~vln~l~~ 169 (476)
....++....|....+ |++.+...+ +.+..+.++++++. ..++ .-.|.++|+.+-+--++.++..
T Consensus 15 ~~v~~~a~~~l~~~gi~~ev~V~saH----R~p~~~~~~~~~a~----~~~~~~ViIa~AG~aa~LpgvvA~~t~ 81 (159)
T 3rg8_A 15 MGHAEKIASELKTFGIEYAIRIGSAH----KTAEHVVSMLKEYE----ALDRPKLYITIAGRSNALSGFVDGFVK 81 (159)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCTT----TCHHHHHHHHHHHH----TSCSCEEEEEECCSSCCHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHcCCCEEEEEEccc----CCHHHHHHHHHHhh----hcCCCcEEEEECCchhhhHHHHHhccC
Confidence 4466666667765554 888776543 35667777876653 1112 3467788999999999999863
No 32
>1ta9_A Glycerol dehydrogenase; oxidoredu; 1.90A {Schizosaccharomyces pombe}
Probab=49.81 E-value=39 Score=34.75 Aligned_cols=88 Identities=16% Similarity=0.169 Sum_probs=54.0
Q ss_pred ceEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEE--eeecCcceeecchhHHHHHHhcchhhhhcccCcceEEEEcCCh
Q 011840 81 APMVVFINSRSGGRHGPELKERLQELMGKEQVFDL--SEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDG 158 (476)
Q Consensus 81 ~~~lvivNP~SG~~~~~~~~~~l~~~L~~~~v~dl--~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Ivv~GGDG 158 (476)
++++|+..+.+-. .+.+++.+.|.... +++ .....++ .....+++++.+ ++ +.|.||++|| |
T Consensus 92 ~rvlIVtd~~~~~----~~~~~v~~~L~~~g-i~~~~~~~~ge~----~~~~v~~~~~~~----~~--~~D~IIAvGG-G 155 (450)
T 1ta9_A 92 KSAVVLADQNVWN----ICANKIVDSLSQNG-MTVTKLVFGGEA----SLVELDKLRKQC----PD--DTQVIIGVGG-G 155 (450)
T ss_dssp SEEEEEEEHHHHH----HTHHHHHHHHHHTT-CEEEEEEECSCC----CHHHHHHHHTTS----CT--TCCEEEEEES-H
T ss_pred CEEEEEECccHHH----HHHHHHHHHHHHCC-CeEEEEeeCCCC----CHHHHHHHHHHH----hh--CCCEEEEeCC-c
Confidence 4899998765432 25566777775533 232 2222111 113445554433 33 6789999999 8
Q ss_pred hHHHHHHHHHhhhccCCCCCCcEEEecC--CCCc
Q 011840 159 TVGWVLGSVGELNKQGREPVPPVAIIPL--GTGN 190 (476)
Q Consensus 159 Tv~~vln~l~~~~~~~~~~~~plgiIPl--GTgN 190 (476)
++..+...+.-. ..+|+..||. |||-
T Consensus 156 SviD~AK~iA~~------~giP~I~IPTTAgtgS 183 (450)
T 1ta9_A 156 KTMDSAKYIAHS------MNLPSIICPTTASSDA 183 (450)
T ss_dssp HHHHHHHHHHHH------TTCCEEEEESSCSCSC
T ss_pred HHHHHHHHHHHh------cCCCEEEEeCCCccCc
Confidence 999988888743 4689999998 4443
No 33
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=48.66 E-value=70 Score=28.58 Aligned_cols=76 Identities=13% Similarity=0.088 Sum_probs=49.3
Q ss_pred eEEEEEcCCCCCCChhHHHHHHHHhhhhcCe-eEEeeecCcceeecchhHHHHHHhcchhhhhcccCcceEEEEcCChhH
Q 011840 82 PMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTV 160 (476)
Q Consensus 82 ~~lvivNP~SG~~~~~~~~~~l~~~L~~~~v-~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Ivv~GGDGTv 160 (476)
++.||.=..|- ....++....|+...+ ||+.+...+ +.+..+.++++++.+ ..-.-.|.++|+.+-+
T Consensus 9 ~V~IimgS~SD----~~v~~~a~~~L~~~gi~~ev~V~SaH----R~p~~~~~~~~~a~~----~g~~ViIa~AG~aa~L 76 (174)
T 3lp6_A 9 RVGVIMGSDSD----WPVMADAAAALAEFDIPAEVRVVSAH----RTPEAMFSYARGAAA----RGLEVIIAGAGGAAHL 76 (174)
T ss_dssp SEEEEESCGGG----HHHHHHHHHHHHHTTCCEEEEECCTT----TCHHHHHHHHHHHHH----HTCCEEEEEEESSCCH
T ss_pred eEEEEECcHHh----HHHHHHHHHHHHHcCCCEEEEEECCC----CCHHHHHHHHHHHHh----CCCCEEEEecCchhhh
Confidence 46666543333 3456666666665543 888776544 356677888776541 1123578889999999
Q ss_pred HHHHHHHHh
Q 011840 161 GWVLGSVGE 169 (476)
Q Consensus 161 ~~vln~l~~ 169 (476)
--++.++..
T Consensus 77 pgvvA~~t~ 85 (174)
T 3lp6_A 77 PGMVAAATP 85 (174)
T ss_dssp HHHHHHHCS
T ss_pred HHHHHhccC
Confidence 999998863
No 34
>3qbe_A 3-dehydroquinate synthase; shikimate pathway, mycobacte tuberculosis, nicotinamide adenine dinucleotide (NAD)-depen enzyme; 2.07A {Mycobacterium tuberculosis} PDB: 3qbd_A
Probab=47.72 E-value=25 Score=35.23 Aligned_cols=93 Identities=15% Similarity=0.101 Sum_probs=53.0
Q ss_pred ceEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEee-ecCcceeecchhHHHHHHhcchhhhhcccCcceEEEEcCChh
Q 011840 81 APMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSE-VKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGT 159 (476)
Q Consensus 81 ~~~lvivNP~SG~~~~~~~~~~l~~~L~~~~v~dl~~-~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Ivv~GGDGT 159 (476)
++++|+.++.... +.+++.+.|.... +++.. ..|.-.-.......+++.+.+.+. .....+.||++|| |+
T Consensus 44 ~rvlIVtd~~v~~-----~~~~v~~~L~~~g-~~~~~~~~~~gE~~kt~~~v~~~~~~l~~~--~~~r~d~IIavGG-Gs 114 (368)
T 3qbe_A 44 HKVAVVHQPGLAE-----TAEEIRKRLAGKG-VDAHRIEIPDAEAGKDLPVVGFIWEVLGRI--GIGRKDALVSLGG-GA 114 (368)
T ss_dssp SEEEEEECGGGHH-----HHHHHHHHHHHTT-CEEEEEECCSGGGGGBHHHHHHHHHHHHHH--TCCTTCEEEEEES-HH
T ss_pred CEEEEEECccHHH-----HHHHHHHHHHhcC-CcceEEEeCCCCCCCCHHHHHHHHHHHHHc--CCCCCcEEEEECC-hH
Confidence 7899999876532 3567777776543 33321 111100011223344444332210 1234689999999 99
Q ss_pred HHHHHHHHHhhhccCCCCCCcEEEecC
Q 011840 160 VGWVLGSVGELNKQGREPVPPVAIIPL 186 (476)
Q Consensus 160 v~~vln~l~~~~~~~~~~~~plgiIPl 186 (476)
+..++..+.... ...+|+..||.
T Consensus 115 v~D~ak~~Aa~~----~rgip~i~IPT 137 (368)
T 3qbe_A 115 ATDVAGFAAATW----LRGVSIVHLPT 137 (368)
T ss_dssp HHHHHHHHHHHG----GGCCEEEEEEC
T ss_pred HHHHHHHHHHHh----ccCCcEEEECC
Confidence 998888776421 14689999997
No 35
>1rrm_A Lactaldehyde reductase; structural genomics, dehydrogenase, PSI, protein structure initiative; HET: APR; 1.60A {Escherichia coli} SCOP: e.22.1.2 PDB: 2bi4_A* 2bl4_A*
Probab=47.27 E-value=35 Score=34.05 Aligned_cols=98 Identities=13% Similarity=0.248 Sum_probs=55.1
Q ss_pred ceEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEE---eeecCcceeecchhHHHHHHhcchhhhhcccCcceEEEEcCC
Q 011840 81 APMVVFINSRSGGRHGPELKERLQELMGKEQVFDL---SEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGD 157 (476)
Q Consensus 81 ~~~lvivNP~SG~~~~~~~~~~l~~~L~~~~v~dl---~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Ivv~GGD 157 (476)
++++|+..+..-. ..+.+++.+.|.... +++ ....|.+ .....+++++.+. ..+.|.||++||
T Consensus 32 ~~~livtd~~~~~---~g~~~~v~~~L~~~g-~~~~~~~~~~~~p----~~~~v~~~~~~~~-----~~~~d~IIavGG- 97 (386)
T 1rrm_A 32 QKALIVTDKTLVQ---CGVVAKVTDKMDAAG-LAWAIYDGVVPNP----TITVVKEGLGVFQ-----NSGADYLIAIGG- 97 (386)
T ss_dssp CEEEEECBHHHHH---TTHHHHHHHHHHHTT-CEEEEECBCCSSC----BHHHHHHHHHHHH-----HHTCSEEEEEES-
T ss_pred CEEEEEECcchhh---chHHHHHHHHHHHcC-CeEEEECCccCCC----CHHHHHHHHHHHH-----hcCcCEEEEeCC-
Confidence 6888887654321 125677777776532 222 2223332 2234455544432 135689999999
Q ss_pred hhHHHHHHHHHhhhcc--------------CCCCCCcEEEecC--CCCccc
Q 011840 158 GTVGWVLGSVGELNKQ--------------GREPVPPVAIIPL--GTGNDL 192 (476)
Q Consensus 158 GTv~~vln~l~~~~~~--------------~~~~~~plgiIPl--GTgNdf 192 (476)
|++..+...+.-.-.. .....+|+..||. |||-..
T Consensus 98 Gsv~D~aK~iA~~~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTT~gtgSev 148 (386)
T 1rrm_A 98 GSPQDTCKAIGIISNNPEFADVRSLEGLSPTNKPSVPILAIPTTAGTAAEV 148 (386)
T ss_dssp HHHHHHHHHHHHHHHCGGGTTSGGGSEECCCCSCCSCEEEEECSSSCCTTT
T ss_pred hHHHHHHHHHHHHHhCCCCCCHHHHhcccccCCCCCCEEEEeCCCCchhhh
Confidence 8888887766432100 0024689999998 555433
No 36
>3clh_A 3-dehydroquinate synthase; shikimate pathway, aromatic amino acid biosynthesis, DHQS, amino-acid biosynthesis, cytoplasm, lyase, NAD; HET: NAD; 2.40A {Helicobacter pylori}
Probab=47.17 E-value=30 Score=34.12 Aligned_cols=92 Identities=13% Similarity=0.112 Sum_probs=53.4
Q ss_pred CceEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEee---ecCcceeecchhHHHHHHhcchhhhhcccCcceEEEEcC
Q 011840 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSE---VKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGG 156 (476)
Q Consensus 80 ~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~~v~dl~~---~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Ivv~GG 156 (476)
.++++|+.++..... ..+++.+.|.... +.+.+ ..+.+ .....+++.+.+.+ ......+.||++||
T Consensus 26 ~~~~livtd~~v~~~----~~~~v~~~L~~~~-~~~~~~~~~e~~k----~~~~v~~~~~~~~~--~~~~r~d~iIavGG 94 (343)
T 3clh_A 26 KQKALIISDSIVAGL----HLPYLLERLKALE-VRVCVIESGEKYK----NFHSLERILNNAFE--MQLNRHSLMIALGG 94 (343)
T ss_dssp SSCEEEEEEHHHHTT----THHHHHTTEECSC-EEEEEECSSGGGC----SHHHHHHHHHHHHH--TTCCTTCEEEEEES
T ss_pred CCEEEEEECCcHHHH----HHHHHHHHHHhCC-cEEEEeCCCCCCC----CHHHHHHHHHHHHh--cCCCCCceEEEECC
Confidence 478999998765432 4566777775432 23222 22211 22334444433321 01234488999998
Q ss_pred ChhHHHHHHHHHhhhccCCCCCCcEEEecCC
Q 011840 157 DGTVGWVLGSVGELNKQGREPVPPVAIIPLG 187 (476)
Q Consensus 157 DGTv~~vln~l~~~~~~~~~~~~plgiIPlG 187 (476)
|++..++..+.... ...+|+..||.=
T Consensus 95 -Gsv~D~ak~~A~~~----~rgip~i~IPTT 120 (343)
T 3clh_A 95 -GVISDMVGFASSIY----FRGIDFINIPTT 120 (343)
T ss_dssp -HHHHHHHHHHHHHB----TTCCEEEEEECS
T ss_pred -hHHHHHHHHHHHHh----ccCCCEEEeCCc
Confidence 89998888776432 257899999953
No 37
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=45.97 E-value=1e+02 Score=27.75 Aligned_cols=77 Identities=17% Similarity=0.152 Sum_probs=50.6
Q ss_pred CceEEEEEcCCCCCCChhHHHHHHHHhhhhcCe-eEEeeecCcceeecchhHHHHHHhcchhhhhcccC-cceEEEEcCC
Q 011840 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQ-KMRIVVAGGD 157 (476)
Q Consensus 80 ~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~~v-~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~-~~~Ivv~GGD 157 (476)
...+.||.=..|- -...++....|....+ ||+.+...+ +.+..+.++++++. .++ .-.|.++||.
T Consensus 21 ~~~V~IimGS~SD----~~v~~~a~~~L~~~Gi~~dv~V~SaH----R~p~~l~~~~~~a~-----~~g~~ViIa~AG~a 87 (182)
T 1u11_A 21 APVVGIIMGSQSD----WETMRHADALLTELEIPHETLIVSAH----RTPDRLADYARTAA-----ERGLNVIIAGAGGA 87 (182)
T ss_dssp CCSEEEEESSGGG----HHHHHHHHHHHHHTTCCEEEEECCTT----TCHHHHHHHHHHTT-----TTTCCEEEEEEESS
T ss_pred CCEEEEEECcHHH----HHHHHHHHHHHHHcCCCeEEEEEccc----CCHHHHHHHHHHHH-----hCCCcEEEEecCch
Confidence 3457777654443 3456666666665543 888776543 35667778877653 122 3467889999
Q ss_pred hhHHHHHHHHHh
Q 011840 158 GTVGWVLGSVGE 169 (476)
Q Consensus 158 GTv~~vln~l~~ 169 (476)
+-+--|+.++..
T Consensus 88 a~LpgvvA~~t~ 99 (182)
T 1u11_A 88 AHLPGMCAAWTR 99 (182)
T ss_dssp CCHHHHHHHHCS
T ss_pred hhhHHHHHhccC
Confidence 999999998863
No 38
>2ywx_A Phosphoribosylaminoimidazole carboxylase catalyti; rossmann fold, structural genomics, NPPSFA; 2.31A {Methanocaldococcus jannaschii}
Probab=44.88 E-value=70 Score=28.07 Aligned_cols=61 Identities=16% Similarity=0.237 Sum_probs=42.3
Q ss_pred hHHHHHHHHhhhhcCe-eEEeeecCcceeecchhHHHHHHhcchhhhhcccCcceEEEEcCChhHHHHHHHHH
Q 011840 97 PELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGDGTVGWVLGSVG 168 (476)
Q Consensus 97 ~~~~~~l~~~L~~~~v-~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Ivv~GGDGTv~~vln~l~ 168 (476)
....++....|....+ ||+.+...+ +.+..+.++++++. ..-.|.++|+.+-+--++.++.
T Consensus 12 ~~v~~~a~~~l~~~gi~~dv~V~saH----R~p~~~~~~~~~a~-------~~ViIa~AG~aa~Lpgvva~~t 73 (157)
T 2ywx_A 12 LKIAEKAVNILKEFGVEFEVRVASAH----RTPELVEEIVKNSK-------ADVFIAIAGLAAHLPGVVASLT 73 (157)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECCTT----TCHHHHHHHHHHCC-------CSEEEEEEESSCCHHHHHHTTC
T ss_pred HHHHHHHHHHHHHcCCCeEEEEEccc----CCHHHHHHHHHhcC-------CCEEEEEcCchhhhHHHHHhcc
Confidence 3456666666665543 888776543 35667777776543 2457888999999999998875
No 39
>1ujn_A Dehydroquinate synthase; riken structu genomics/proteomics initiative, RSGI, structural genomics,; 1.80A {Thermus thermophilus} SCOP: e.22.1.1
Probab=42.90 E-value=30 Score=34.15 Aligned_cols=89 Identities=17% Similarity=0.192 Sum_probs=52.1
Q ss_pred CceEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEee--ecCcceeecchhHHHHHHhcchhhhhcccCcceEEEEcCC
Q 011840 80 EAPMVVFINSRSGGRHGPELKERLQELMGKEQVFDLSE--VKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGD 157 (476)
Q Consensus 80 ~~~~lvivNP~SG~~~~~~~~~~l~~~L~~~~v~dl~~--~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Ivv~GGD 157 (476)
.++++|+.++... . ..+++.+.|. .. +++.. ..|.+ .....+++.+.+.+ ......+.||++||
T Consensus 28 ~~kvliVtd~~v~----~-~~~~v~~~L~-~~-~~~~~~~ge~~~----~~~~v~~~~~~~~~--~~~~r~d~IIavGG- 93 (348)
T 1ujn_A 28 AGPAALLFDRRVE----G-FAQEVAKALG-VR-HLLGLPGGEAAK----SLEVYGKVLSWLAE--KGLPRNATLLVVGG- 93 (348)
T ss_dssp SSCEEEEEEGGGH----H-HHHHHHHHHT-CC-CEEEECCSGGGS----SHHHHHHHHHHHHH--HTCCTTCEEEEEES-
T ss_pred CCEEEEEECCcHH----H-HHHHHHHHhc-cC-eEEEECCCCCCC----CHHHHHHHHHHHHH--cCCCCCCEEEEECC-
Confidence 4789999986532 3 6667777775 22 22221 12211 22334444433221 01234588999998
Q ss_pred hhHHHHHHHHHhhhccCCCCCCcEEEecC
Q 011840 158 GTVGWVLGSVGELNKQGREPVPPVAIIPL 186 (476)
Q Consensus 158 GTv~~vln~l~~~~~~~~~~~~plgiIPl 186 (476)
|++..++..+...- ...+|+-.||.
T Consensus 94 Gsv~D~ak~~A~~~----~rgip~i~IPT 118 (348)
T 1ujn_A 94 GTLTDLGGFVAATY----LRGVAYLAFPT 118 (348)
T ss_dssp HHHHHHHHHHHHHB----TTCCEEEEEEC
T ss_pred cHHHHHHHHHHHHh----ccCCCEEEecC
Confidence 89999888876431 25789999997
No 40
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=41.00 E-value=1.2e+02 Score=27.02 Aligned_cols=75 Identities=15% Similarity=0.100 Sum_probs=48.0
Q ss_pred eEEEEEcCCCCCCChhHHHHHHHHhhhhcCe-eEEeeecCcceeecchhHHHHHHhcchhhhhcccC-cceEEEEcCChh
Q 011840 82 PMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQ-KMRIVVAGGDGT 159 (476)
Q Consensus 82 ~~lvivNP~SG~~~~~~~~~~l~~~L~~~~v-~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~-~~~Ivv~GGDGT 159 (476)
++.||.=..| -....++....|....+ |++.+...+ +.+..+.++++++. .++ .-.|.++|+.+-
T Consensus 8 ~V~IimgS~S----D~~v~~~a~~~l~~~gi~~ev~V~SaH----R~p~~~~~~~~~a~-----~~g~~ViIa~AG~aa~ 74 (169)
T 3trh_A 8 FVAILMGSDS----DLSTMETAFTELKSLGIPFEAHILSAH----RTPKETVEFVENAD-----NRGCAVFIAAAGLAAH 74 (169)
T ss_dssp EEEEEESCGG----GHHHHHHHHHHHHHTTCCEEEEECCTT----TSHHHHHHHHHHHH-----HTTEEEEEEEECSSCC
T ss_pred cEEEEECcHH----hHHHHHHHHHHHHHcCCCEEEEEEccc----CCHHHHHHHHHHHH-----hCCCcEEEEECChhhh
Confidence 3555543333 23456666666665543 888776543 35667777877653 122 346888899999
Q ss_pred HHHHHHHHHh
Q 011840 160 VGWVLGSVGE 169 (476)
Q Consensus 160 v~~vln~l~~ 169 (476)
+--++.++..
T Consensus 75 LpgvvA~~t~ 84 (169)
T 3trh_A 75 LAGTIAAHTL 84 (169)
T ss_dssp HHHHHHHTCS
T ss_pred hHHHHHhcCC
Confidence 9999998853
No 41
>3s4e_A Dual specificity protein phosphatase 19; PTP, protein tyrosine phosphatase, hydrolase; 1.26A {Homo sapiens}
Probab=38.19 E-value=5.9 Score=33.64 Aligned_cols=33 Identities=9% Similarity=0.014 Sum_probs=27.0
Q ss_pred heehhhhcCCce-eeecccccccccccccchhhh
Q 011840 16 MIDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (476)
Q Consensus 16 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~y~~~~ 48 (476)
.++..+..|..+ |||..|..|+-.++.+||...
T Consensus 73 fi~~~~~~~~~VlVHC~~G~sRS~~~v~ayLm~~ 106 (144)
T 3s4e_A 73 FIEEAKRKDGVVLVHSNAGVSRAAAIVIGFLMNS 106 (144)
T ss_dssp HHHHHHHTTCCEEEECSSSSSHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCeEEEEcCCCCchHHHHHHHHHHHH
Confidence 345566677778 999999999999999999863
No 42
>2hig_A 6-phospho-1-fructokinase; transferase; 2.40A {Trypanosoma brucei} PDB: 3f5m_A*
Probab=38.08 E-value=63 Score=33.65 Aligned_cols=42 Identities=29% Similarity=0.219 Sum_probs=31.1
Q ss_pred CcceEEEEcCChhHHHHH---HHHHhhhccCCCCCCcEEEecCCCCcccc
Q 011840 147 QKMRIVVAGGDGTVGWVL---GSVGELNKQGREPVPPVAIIPLGTGNDLS 193 (476)
Q Consensus 147 ~~~~Ivv~GGDGTv~~vl---n~l~~~~~~~~~~~~plgiIPlGTgNdfa 193 (476)
+-+.++++|||||..-+. ..+.+. ...+++--||-==-||++
T Consensus 189 ~Id~LvvIGGdgS~~~A~~L~e~~~~~-----g~~i~vVGIPkTIDNDl~ 233 (487)
T 2hig_A 189 GVNILFTVGGDGTQRGALVISQEAKRR-----GVDISVFGVPKTIDNDLS 233 (487)
T ss_dssp TCSEEEEEECHHHHHHHHHHHHHHHHH-----TCCCEEEEEECCTTSSCC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHHHh-----CCCceEEeccccccCCCC
Confidence 567999999999987443 222222 246889999999999996
No 43
>3rf7_A Iron-containing alcohol dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: NAD EPE; 2.12A {Shewanella denitrificans}
Probab=37.83 E-value=44 Score=33.48 Aligned_cols=45 Identities=27% Similarity=0.324 Sum_probs=29.4
Q ss_pred cceEEEEcCChhHHHHHHHHHhhhcc------------CCCCCCcEEEecC--CCCcccc
Q 011840 148 KMRIVVAGGDGTVGWVLGSVGELNKQ------------GREPVPPVAIIPL--GTGNDLS 193 (476)
Q Consensus 148 ~~~Ivv~GGDGTv~~vln~l~~~~~~------------~~~~~~plgiIPl--GTgNdfa 193 (476)
.|.||++|| |++..+...+.-.-.. .....+|+..||. |||--..
T Consensus 110 ~D~IIavGG-GS~iD~AK~iA~~~~~~~~~~~~~~~~~~~~~~~P~i~IPTTagtgSevt 168 (375)
T 3rf7_A 110 PVSVVGLGG-GSTMDLAKAVSLMLTNPGSSSEYQGWDLIKNPAVHHIGIPTVSGTGAEAS 168 (375)
T ss_dssp CSEEEEEES-HHHHHHHHHHHHHTSSCSCGGGGCEESCCCSCCCCEEEEESSCSSCTTTC
T ss_pred CCEEEEeCC-cHHHHHHHHHHHHHhCCCCHHHhhccccccCCCCCEEEEcCCCccchhhC
Confidence 789999999 8888888776542100 0023579999997 4444333
No 44
>2j16_A SDP-1, tyrosine-protein phosphatase YIL113W; hydrolase, hypothetical protein; 2.7A {Saccharomyces cerevisiae} PDB: 2j17_A* 2j16_B
Probab=36.62 E-value=6.6 Score=35.36 Aligned_cols=31 Identities=10% Similarity=-0.115 Sum_probs=26.1
Q ss_pred ehhhhcCCce-eeecccccccccccccchhhh
Q 011840 18 DSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (476)
Q Consensus 18 ~~~~~~~~~~-~~~~~~~~~~~~~~~~y~~~~ 48 (476)
+..+..|..| |||..|..|+..++.+||...
T Consensus 111 ~~~~~~g~~VLVHC~~G~sRS~tvv~ayLm~~ 142 (182)
T 2j16_A 111 HAATTKREKILIHAQCGLSRSATLIIAYIMKY 142 (182)
T ss_dssp HHHHHTTCCEEEEESSCCSHHHHHHHHHHHHH
T ss_pred HHHHhcCCeEEEECCCCCChHHHHHHHHHHHH
Confidence 4555667777 999999999999999999864
No 45
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=36.02 E-value=1.7e+02 Score=26.25 Aligned_cols=77 Identities=17% Similarity=0.178 Sum_probs=48.7
Q ss_pred CCceE-EEEEcCCCCCCChhHHHHHHHHhhhhcCe-eEEeeecCcceeecchhHHHHHHhcchhhhhcccCc-ceEEEEc
Q 011840 79 PEAPM-VVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQK-MRIVVAG 155 (476)
Q Consensus 79 ~~~~~-lvivNP~SG~~~~~~~~~~l~~~L~~~~v-~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~-~~Ivv~G 155 (476)
.++|+ -||.=..|- -...++....|....+ |++.+...+. .+..+.++++++. .++. -.|.++|
T Consensus 20 ~mkp~V~IimGS~SD----~~v~~~a~~~L~~~gI~~e~~V~SAHR----tp~~l~~~~~~a~-----~~g~~ViIa~AG 86 (181)
T 4b4k_A 20 HMKSLVGVIMGSTSD----WETMKYACDILDELNIPYEKKVVSAHR----TPDYMFEYAETAR-----ERGLKVIIAGAG 86 (181)
T ss_dssp --CCSEEEEESSGGG----HHHHHHHHHHHHHTTCCEEEEECCTTT----SHHHHHHHHHHTT-----TTTCCEEEEEEC
T ss_pred CCCccEEEEECCHhH----HHHHHHHHHHHHHcCCCeeEEEEcccc----ChHHHHHHHHHHH-----hcCceEEEEecc
Confidence 45664 466544433 3566777777776664 8887765432 4566777777654 2333 4677889
Q ss_pred CChhHHHHHHHHH
Q 011840 156 GDGTVGWVLGSVG 168 (476)
Q Consensus 156 GDGTv~~vln~l~ 168 (476)
|.+-+--++.++.
T Consensus 87 ~aahLpGvvAa~T 99 (181)
T 4b4k_A 87 GAAHLPGMVAAKT 99 (181)
T ss_dssp SSCCHHHHHHTTC
T ss_pred ccccchhhHHhcC
Confidence 9999998887764
No 46
>3emu_A Leucine rich repeat and phosphatase domain containing protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.30A {Entamoeba histolytica}
Probab=35.43 E-value=7.1 Score=34.03 Aligned_cols=32 Identities=6% Similarity=-0.198 Sum_probs=26.0
Q ss_pred eehhhhcCCce-eeecccccccccccccchhhh
Q 011840 17 IDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (476)
Q Consensus 17 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~y~~~~ 48 (476)
|+..+..|..+ |||..|..|+..++.+||...
T Consensus 80 I~~~~~~~~~VlVHC~~G~sRS~~vv~ayLm~~ 112 (161)
T 3emu_A 80 IIRSIQRKEGVLIISGTGVNKAPAIVIAFLMYY 112 (161)
T ss_dssp HHHHHHTTCEEEEEESSSSSHHHHHHHHHHHHH
T ss_pred HHHHHhcCCeEEEEcCCCCcHHHHHHHHHHHHH
Confidence 34555667777 999999999999999999864
No 47
>3ezz_A Dual specificity protein phosphatase 4; alpha/beta, hydrolase, nucleus; 2.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1m3g_A
Probab=34.91 E-value=7.6 Score=32.81 Aligned_cols=32 Identities=19% Similarity=0.225 Sum_probs=26.2
Q ss_pred eehhhhcCCce-eeecccccccccccccchhhh
Q 011840 17 IDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (476)
Q Consensus 17 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~y~~~~ 48 (476)
++..+..|..+ |||..|..|+-.++.+||...
T Consensus 74 i~~~~~~~~~VlVHC~~G~~RS~~~~~aylm~~ 106 (144)
T 3ezz_A 74 IDAVKDCRGRVLVHSQAGISRSATICLAYLMMK 106 (144)
T ss_dssp HHHHHHTTCCEEEEESSSSSHHHHHHHHHHHHH
T ss_pred HHHHHhcCCeEEEECCCCCChhHHHHHHHHHHH
Confidence 34556667777 999999999999999999864
No 48
>1pfk_A Phosphofructokinase; transferase(phosphotransferase); HET: FBP ADP; 2.40A {Escherichia coli} SCOP: c.89.1.1 PDB: 2pfk_A
Probab=33.93 E-value=1.2e+02 Score=29.65 Aligned_cols=40 Identities=30% Similarity=0.333 Sum_probs=31.4
Q ss_pred cCcceEEEEcCChhHHHHHHHHHhhhccCCCCCCcEEEecCCCCcccc
Q 011840 146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLS 193 (476)
Q Consensus 146 ~~~~~Ivv~GGDGTv~~vln~l~~~~~~~~~~~~plgiIPlGTgNdfa 193 (476)
.+-+.++++|||||..-+. .|.+ ..+++--||-==-||+.
T Consensus 93 ~~Id~LvvIGGdgS~~~a~-~L~~-------~~i~vvgiPkTIDNDl~ 132 (320)
T 1pfk_A 93 RGIDALVVIGGDGSYMGAM-RLTE-------MGFPCIGLPGTIDNDIK 132 (320)
T ss_dssp TTCCEEEEEECHHHHHHHH-HHHH-------TTCCEEEEEBCTTCCCT
T ss_pred cCCCEEEEECCCchHHHHH-HHHh-------hCCCEEEEeccccCCCC
Confidence 3567999999999987553 4544 36788889999999987
No 49
>2nt2_A Protein phosphatase slingshot homolog 2; alpha/beta hydrolase; 2.10A {Homo sapiens}
Probab=31.46 E-value=8.5 Score=32.58 Aligned_cols=32 Identities=13% Similarity=0.082 Sum_probs=25.7
Q ss_pred eehhhhcCCce-eeecccccccccccccchhhh
Q 011840 17 IDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (476)
Q Consensus 17 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~y~~~~ 48 (476)
++..+..|..+ |||..|..|+-.++.+||...
T Consensus 74 i~~~~~~~~~VlVHC~~G~~RS~~~v~ayLm~~ 106 (145)
T 2nt2_A 74 ISKAKKHGSKCLVHSKMGVSRSASTVIAYAMKE 106 (145)
T ss_dssp HHHHHHTTCEEEEECSSSSSHHHHHHHHHHHHH
T ss_pred HHHHHHcCCeEEEECCCCCchHHHHHHHHHHHH
Confidence 34555567777 999999999999999999863
No 50
>1zxx_A 6-phosphofructokinase; allosteric regulation, lactobacillus BU transferase; 1.85A {Lactobacillus delbrueckii subsp}
Probab=30.99 E-value=1e+02 Score=30.11 Aligned_cols=40 Identities=25% Similarity=0.240 Sum_probs=30.9
Q ss_pred cCcceEEEEcCChhHHHHHHHHHhhhccCCCCCCcEEEecCCCCcccc
Q 011840 146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLS 193 (476)
Q Consensus 146 ~~~~~Ivv~GGDGTv~~vln~l~~~~~~~~~~~~plgiIPlGTgNdfa 193 (476)
.+-+.++++|||||..-+. .|.+ ..+++--||-==-||++
T Consensus 92 ~~Id~LvvIGGdgS~~~a~-~L~~-------~~i~vvgiPkTIDNDl~ 131 (319)
T 1zxx_A 92 HGIDAVVVIGGDGSYHGAL-QLTR-------HGFNSIGLPGTIDNDIP 131 (319)
T ss_dssp TTCCEEEEEECHHHHHHHH-HHHH-------TTCCEEEEEEETTCCCT
T ss_pred hCCCEEEEECCchHHHHHH-HHHH-------hCCCEEEEeecccCCCC
Confidence 3567999999999986544 4444 35788889998899987
No 51
>1xah_A Sadhqs, 3-dehydroquinate synthase; shikimate pathway, aromatic amino acid biosynthesis, open form, form B, domain movement, cyclase; HET: NAD; 2.20A {Staphylococcus aureus} PDB: 1xag_A* 1xai_A* 1xaj_A* 1xal_A*
Probab=30.99 E-value=32 Score=33.98 Aligned_cols=90 Identities=11% Similarity=0.126 Sum_probs=47.8
Q ss_pred ceEEEEEcCCCCCCChhHHHHHHHHhhhhcCeeEEe---eecCcceeecchhHHHHHHhcchhhhhcccCcceEEEEcCC
Q 011840 81 APMVVFINSRSGGRHGPELKERLQELMGKEQVFDLS---EVKPHEFVQYGLACLEKLAELGDFCAKDTRQKMRIVVAGGD 157 (476)
Q Consensus 81 ~~~lvivNP~SG~~~~~~~~~~l~~~L~~~~v~dl~---~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~~~Ivv~GGD 157 (476)
++++|+.++... ....+++.+.| ....+++. ...+.+ .....+++.+.+.+ ......+.||++||
T Consensus 32 ~~~liVtd~~~~----~~~~~~v~~~L-~~g~~~~~~~~~~e~~p----~~~~v~~~~~~~~~--~~~~r~d~iIavGG- 99 (354)
T 1xah_A 32 DQSFLLIDEYVN----QYFANKFDDIL-SYENVHKVIIPAGEKTK----TFEQYQETLEYILS--HHVTRNTAIIAVGG- 99 (354)
T ss_dssp SCEEEEEEHHHH----HHHHHHHC-------CEEEEEECSGGGGC----SHHHHHHHHHHHHT--TCCCTTCEEEEEES-
T ss_pred CeEEEEECCcHH----HHHHHHHHHHH-hcCCeEEEEECCCCCCC----CHHHHHHHHHHHHH--cCCCCCceEEEECC-
Confidence 788999886432 22556666666 33212221 122211 22334444433321 01223488999998
Q ss_pred hhHHHHHHHHHhhhccCCCCCCcEEEecC
Q 011840 158 GTVGWVLGSVGELNKQGREPVPPVAIIPL 186 (476)
Q Consensus 158 GTv~~vln~l~~~~~~~~~~~~plgiIPl 186 (476)
|++..++..+...- ...+|+-.||.
T Consensus 100 Gsv~D~ak~vA~~~----~rgip~i~IPT 124 (354)
T 1xah_A 100 GATGDFAGFVAATL----LRGVHFIQVPT 124 (354)
T ss_dssp HHHHHHHHHHHHHB----TTCCEEEEEEC
T ss_pred hHHHHHHHHHHHHh----ccCCCEEEECC
Confidence 89999888876432 25789999998
No 52
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=29.50 E-value=1.5e+02 Score=28.14 Aligned_cols=29 Identities=10% Similarity=0.084 Sum_probs=23.0
Q ss_pred cCcceEEEEcCChhHHHHHHHHHhhhccCCCCCCcEEEecC
Q 011840 146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPL 186 (476)
Q Consensus 146 ~~~~~Ivv~GGDGTv~~vln~l~~~~~~~~~~~~plgiIPl 186 (476)
...|.+|..|| +|+.|++- ...|.-+||.
T Consensus 224 ~~aDlvI~~gG-~T~~E~~~-----------~g~P~i~ip~ 252 (282)
T 3hbm_A 224 NESNKLIISAS-SLVNEALL-----------LKANFKAICY 252 (282)
T ss_dssp HTEEEEEEESS-HHHHHHHH-----------TTCCEEEECC
T ss_pred HHCCEEEECCc-HHHHHHHH-----------cCCCEEEEeC
Confidence 45788999999 99999883 4577778885
No 53
>1wrm_A Dual specificity phosphatase 22; DSP, JNK, hydrolase; HET: MES; 1.50A {Homo sapiens}
Probab=27.58 E-value=11 Score=32.79 Aligned_cols=31 Identities=16% Similarity=0.018 Sum_probs=25.2
Q ss_pred ehhhhcCCce-eeecccccccccccccchhhh
Q 011840 18 DSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (476)
Q Consensus 18 ~~~~~~~~~~-~~~~~~~~~~~~~~~~y~~~~ 48 (476)
+..+..|..+ |||..|..|+-.++.+||...
T Consensus 77 ~~~~~~~~~VlVHC~aG~~RSg~~~~ayLm~~ 108 (165)
T 1wrm_A 77 HECRLRGESCLVHCLAGVSRSVTLVIAYIMTV 108 (165)
T ss_dssp HHHHHTTCEEEEECSSSSSHHHHHHHHHHHHT
T ss_pred HHHHHCCCeEEEECCCCCChhHHHHHHHHHHH
Confidence 3445567777 999999999999999999864
No 54
>1zzw_A Dual specificity protein phosphatase 10; MKP, PTP, hydrolase; 1.60A {Homo sapiens}
Probab=27.48 E-value=11 Score=32.02 Aligned_cols=31 Identities=19% Similarity=0.263 Sum_probs=25.0
Q ss_pred eehhhhcCCce-eeecccccccccccccchhh
Q 011840 17 IDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRV 47 (476)
Q Consensus 17 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~y~~~ 47 (476)
++..+..|..+ |||..|..|+-.++.+||..
T Consensus 76 i~~~~~~~~~VlVHC~~G~~RSg~~~~ayl~~ 107 (149)
T 1zzw_A 76 IEEAHQCGKGLLIHCQAGVSRSATIVIAYLMK 107 (149)
T ss_dssp HHHHHHTTCEEEEECSSSSSHHHHHHHHHHHH
T ss_pred HHHHHHcCCeEEEECCCCCCHHHHHHHHHHHH
Confidence 34445556777 99999999999999999985
No 55
>3rgo_A Protein-tyrosine phosphatase mitochondrial 1; phosphatidylglycerol phosphate (PGP) phosphatase, hydrolase; 1.93A {Mus musculus} PDB: 3rgq_A*
Probab=27.20 E-value=11 Score=32.11 Aligned_cols=31 Identities=13% Similarity=0.094 Sum_probs=25.2
Q ss_pred ehhhhcCCce-eeecccccccccccccchhhh
Q 011840 18 DSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (476)
Q Consensus 18 ~~~~~~~~~~-~~~~~~~~~~~~~~~~y~~~~ 48 (476)
+..+..|..+ |||..|..|+-.++.+||...
T Consensus 83 ~~~~~~~~~vlVHC~~G~~Rsg~~~~a~l~~~ 114 (157)
T 3rgo_A 83 LKYQALGQCVYVHCKAGRSRSATMVAAYLIQV 114 (157)
T ss_dssp HHHHHTTCEEEEESSSSSSHHHHHHHHHHHHH
T ss_pred HHHHHCCCEEEEECCCCCChHHHHHHHHHHHH
Confidence 4455566667 999999999999999998864
No 56
>2hcm_A Dual specificity protein phosphatase; structural genomics, PSI, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Mus musculus}
Probab=26.67 E-value=12 Score=32.50 Aligned_cols=31 Identities=16% Similarity=0.048 Sum_probs=24.9
Q ss_pred ehhhhcCCce-eeecccccccccccccchhhh
Q 011840 18 DSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (476)
Q Consensus 18 ~~~~~~~~~~-~~~~~~~~~~~~~~~~y~~~~ 48 (476)
+..+..|..+ |||..|-.|+-.++.+||...
T Consensus 83 ~~~~~~~~~VlVHC~aG~~RSg~~~~ayLm~~ 114 (164)
T 2hcm_A 83 EAAVRDGGSCLVYCKNGRSRSAAVCTAYLMRH 114 (164)
T ss_dssp HHHHHTTCEEEEEESSSSHHHHHHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCCCCchHHHHHHHHHHHH
Confidence 3445556677 999999999999999998864
No 57
>2x9a_A Attachment protein G3P; transmembrane, phage infection, phage recognition, HOST-VIRU interaction, virion; 2.47A {Enterobacteria phage IF1} PDB: 2x9b_A
Probab=26.66 E-value=16 Score=26.98 Aligned_cols=12 Identities=17% Similarity=0.053 Sum_probs=10.5
Q ss_pred ceEEEEcCChhH
Q 011840 149 MRIVVAGGDGTV 160 (476)
Q Consensus 149 ~~Ivv~GGDGTv 160 (476)
.-|+|++||||+
T Consensus 39 tGViVg~~dgtv 50 (65)
T 2x9a_A 39 SGIGIGYDNDTS 50 (65)
T ss_dssp EEEEEEETTTTE
T ss_pred eeEEEECCCCCE
Confidence 469999999997
No 58
>3gw6_A Endo-N-acetylneuraminidase; chaperone, glycosidase, hydrolase; HET: TAM; 2.60A {Enterobacteria phage K1F}
Probab=26.24 E-value=23 Score=33.97 Aligned_cols=14 Identities=43% Similarity=0.826 Sum_probs=11.9
Q ss_pred cceEEEEcCChhHH
Q 011840 148 KMRIVVAGGDGTVG 161 (476)
Q Consensus 148 ~~~Ivv~GGDGTv~ 161 (476)
..++|+|||+||-+
T Consensus 46 ~q~~i~~g~~~t~~ 59 (275)
T 3gw6_A 46 GQRIIFCGGEGTSS 59 (275)
T ss_dssp GCEEEEESSSSSST
T ss_pred ccEEEEecCCCCCC
Confidence 45999999999965
No 59
>2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase; 2.80A {Homo sapiens}
Probab=25.71 E-value=1.5e+02 Score=30.28 Aligned_cols=76 Identities=18% Similarity=0.204 Sum_probs=49.2
Q ss_pred ceEEEEEcCCCCCCChhHHHHHHHHhhhhcCe-eEEeeecCcceeecchhHHHHHHhcchhhhhcccCc--ceEEEEcCC
Q 011840 81 APMVVFINSRSGGRHGPELKERLQELMGKEQV-FDLSEVKPHEFVQYGLACLEKLAELGDFCAKDTRQK--MRIVVAGGD 157 (476)
Q Consensus 81 ~~~lvivNP~SG~~~~~~~~~~l~~~L~~~~v-~dl~~~~p~~~~t~~~~~~~~la~~~~~~a~~~~~~--~~Ivv~GGD 157 (476)
..+.||.=..|- -...++....|....+ |++.+..-+ +.+..+.++++++. .++. -.|.++||.
T Consensus 266 ~~V~Ii~gs~SD----~~~~~~a~~~l~~~gi~~~v~V~saH----R~p~~~~~~~~~~~-----~~g~~~viIa~AG~~ 332 (425)
T 2h31_A 266 CRVVVLMGSTSD----LGHCEKIKKACGNFGIPCELRVTSAH----KGPDETLRIKAEYE-----GDGIPTVFVAVAGRS 332 (425)
T ss_dssp CEEEEEESCGGG----HHHHHHHHHHHHHTTCCEEEEECCTT----TCHHHHHHHHHHHH-----TTCCCEEEEEECCSS
T ss_pred CeEEEEecCccc----HHHHHHHHHHHHHcCCceEEeeeecc----CCHHHHHHHHHHHH-----HCCCCeEEEEEcCcc
Confidence 456666644333 3456666666665543 888775433 35677788887654 2333 467788999
Q ss_pred hhHHHHHHHHHh
Q 011840 158 GTVGWVLGSVGE 169 (476)
Q Consensus 158 GTv~~vln~l~~ 169 (476)
|.+--|+.++..
T Consensus 333 a~Lpgvva~~t~ 344 (425)
T 2h31_A 333 NGLGPVMSGNTA 344 (425)
T ss_dssp CCHHHHHHHHCS
T ss_pred cchHhHHhccCC
Confidence 999999999863
No 60
>3f81_A Dual specificity protein phosphatase 3; hydrolase, protein dual-specificity phosphatase, inhibitor; HET: STT; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1vhr_A* 1j4x_A*
Probab=25.14 E-value=14 Score=32.59 Aligned_cols=30 Identities=10% Similarity=-0.040 Sum_probs=24.0
Q ss_pred hhhhc-CCce-eeecccccccccccccchhhh
Q 011840 19 SIRGC-GLSG-MRIDKEDLRRKLSIPEYLRVA 48 (476)
Q Consensus 19 ~~~~~-~~~~-~~~~~~~~~~~~~~~~y~~~~ 48 (476)
..+.. |..+ |||..|..|+-.++.+||...
T Consensus 109 ~~~~~~~~~VlVHC~~G~~RSg~~v~ayLm~~ 140 (183)
T 3f81_A 109 QALAQKNGRVLVHCREGYSRSPTLVIAYLMMR 140 (183)
T ss_dssp HHHHSTTCCEEEECSSSSSHHHHHHHHHHHHH
T ss_pred HHHHcCCCeEEEECCCCcchHHHHHHHHHHHH
Confidence 33333 6667 999999999999999999864
No 61
>2esb_A Dual specificity protein phosphatase 18; alpha/beta structure, hydrolase; HET: EPE; 2.00A {Homo sapiens}
Probab=24.23 E-value=14 Score=32.96 Aligned_cols=31 Identities=13% Similarity=-0.078 Sum_probs=24.9
Q ss_pred ehhhhcCCce-eeecccccccccccccchhhh
Q 011840 18 DSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (476)
Q Consensus 18 ~~~~~~~~~~-~~~~~~~~~~~~~~~~y~~~~ 48 (476)
+..+..|..+ |||..|-.|+-.++.+||...
T Consensus 91 ~~~~~~~~~VLVHC~aG~sRS~~vv~ayLm~~ 122 (188)
T 2esb_A 91 HSVEMKQGRTLLHCAAGVSRSAALCLAYLMKY 122 (188)
T ss_dssp HHHHHTTCCEEEECSSSSSHHHHHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCCCCchHHHHHHHHHHHH
Confidence 4444557777 999999999999999999763
No 62
>3cm3_A Late protein H1, dual specificity protein phosphatase; dual-specificity phosphatase, VH1, hydrolase; 1.32A {Vaccinia virus} PDB: 2rf6_A 2p4d_A
Probab=23.79 E-value=14 Score=32.47 Aligned_cols=32 Identities=13% Similarity=-0.021 Sum_probs=25.7
Q ss_pred eehhhhcCCce-eeecccccccccccccchhhh
Q 011840 17 IDSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (476)
Q Consensus 17 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~y~~~~ 48 (476)
++..+..|..+ |||..|-.|+-.++.+||...
T Consensus 101 i~~~~~~~~~VlVHC~aG~~RSg~~v~aylm~~ 133 (176)
T 3cm3_A 101 LSKCDQRNEPVLVHSAAGVNRSGAMILAYLMSK 133 (176)
T ss_dssp HHHHHHHTCCEEEECSSSSSHHHHHHHHHHHHH
T ss_pred HHHHHHCCCcEEEECCcCCCHHHHHHHHHHHHH
Confidence 34555556667 999999999999999999864
No 63
>4a3s_A 6-phosphofructokinase; transferase, glycolysis, degradosome; 2.30A {Bacillus subtilis} PDB: 6pfk_A 3u39_A 3pfk_A 4pfk_A* 1mto_A*
Probab=23.59 E-value=1.8e+02 Score=28.35 Aligned_cols=39 Identities=28% Similarity=0.300 Sum_probs=30.6
Q ss_pred CcceEEEEcCChhHHHHHHHHHhhhccCCCCCCcEEEecCCCCcccc
Q 011840 147 QKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLS 193 (476)
Q Consensus 147 ~~~~Ivv~GGDGTv~~vln~l~~~~~~~~~~~~plgiIPlGTgNdfa 193 (476)
+-+.++++|||||..-+ ..|.+ ..+++--||-==-||+.
T Consensus 93 ~Id~L~~IGGdgS~~~a-~~l~~-------~~i~vigiPkTIDNDl~ 131 (319)
T 4a3s_A 93 GIEGLVVIGGDGSYMGA-KKLTE-------HGFPCVGVPGTIDNDIP 131 (319)
T ss_dssp TCCEEEEEECTTHHHHH-HHHHH-------TTCCEEEEEEETTCCCT
T ss_pred CCCEEEEeCCcHHHHHH-HHHhc-------cCCcEEEeeccccCCCC
Confidence 56789999999998754 34543 46788889988899986
No 64
>3hno_A Pyrophosphate-dependent phosphofructokinase; structural genomics, PSI-2, protein structure initiative; 2.00A {Nitrosospira multiformis atcc 25196} PDB: 3k2q_A
Probab=23.51 E-value=2.2e+02 Score=28.91 Aligned_cols=46 Identities=20% Similarity=0.188 Sum_probs=30.7
Q ss_pred cCcceEEEEcCChhHHHHHHHHHhhhccCCCCCCcEEEecCCCCcccc
Q 011840 146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLS 193 (476)
Q Consensus 146 ~~~~~Ivv~GGDGTv~~vln~l~~~~~~~~~~~~plgiIPlGTgNdfa 193 (476)
.+-+.++++|||||..-+. .|.+.-.. ....+++--||-==-||++
T Consensus 103 ~~Id~Lv~IGGdgS~~~A~-~L~~~~~~-~g~~i~vIGiPkTIDNDl~ 148 (419)
T 3hno_A 103 HDIGYFFYNGGGDSADTCL-KVSQLSGT-LGYPIQAIHVPKTVDNDLP 148 (419)
T ss_dssp TTEEEEEEEESHHHHHHHH-HHHHHHHH-TTCCCEEEEEECCTTCCCS
T ss_pred cCCCEEEEeCCchHHHHHH-HHHHHHHH-hCCCccEEEecccccCCCc
Confidence 3567899999999986443 33321000 1245788889988899996
No 65
>2g6z_A Dual specificity protein phosphatase 5; alpha/beta, hydrolase; 2.70A {Homo sapiens}
Probab=22.97 E-value=17 Score=33.46 Aligned_cols=31 Identities=19% Similarity=0.113 Sum_probs=25.4
Q ss_pred ehhhhcCCce-eeecccccccccccccchhhh
Q 011840 18 DSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (476)
Q Consensus 18 ~~~~~~~~~~-~~~~~~~~~~~~~~~~y~~~~ 48 (476)
+..+..|..+ |||..|..|+-.++.+||...
T Consensus 77 ~~~~~~~~~VLVHC~aG~sRSgtvv~AYLm~~ 108 (211)
T 2g6z_A 77 DCVREKGGKVLVHSEAGISRSPTICMAYLMKT 108 (211)
T ss_dssp HHHHHTTCCEEEEESSSSSHHHHHHHHHHHHH
T ss_pred HHHHhcCCeEEEECCCCCCcHHHHHHHHHHHH
Confidence 4455567777 999999999999999999864
No 66
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=22.90 E-value=1.1e+02 Score=27.20 Aligned_cols=49 Identities=12% Similarity=0.125 Sum_probs=30.4
Q ss_pred chhHHHHHHhcchhhhhcccCcceEEEEcC-ChhHHHHHHHHHhhhccCCCCCCcEEEecCC
Q 011840 127 GLACLEKLAELGDFCAKDTRQKMRIVVAGG-DGTVGWVLGSVGELNKQGREPVPPVAIIPLG 187 (476)
Q Consensus 127 ~~~~~~~la~~~~~~a~~~~~~~~Ivv~GG-DGTv~~vln~l~~~~~~~~~~~~plgiIPlG 187 (476)
+...+++|++... +....||--|| -|-...+..+..+. ....+||||-.
T Consensus 30 ~~~~A~~lg~~La------~~g~~lVsGGg~~Gim~aa~~gAl~~------gG~tigVlP~~ 79 (176)
T 2iz6_A 30 QLVMANELGKQIA------THGWILLTGGRSLGVMHEAMKGAKEA------GGTTIGVLPGP 79 (176)
T ss_dssp HHHHHHHHHHHHH------HTTCEEEEECSSSSHHHHHHHHHHHT------TCCEEEEECC-
T ss_pred HHHHHHHHHHHHH------HCCCEEEECCCccCHhHHHHHHHHHc------CCEEEEEeCch
Confidence 3344555554432 23445666666 68888888887763 45789999865
No 67
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=22.74 E-value=69 Score=28.31 Aligned_cols=59 Identities=19% Similarity=0.076 Sum_probs=31.4
Q ss_pred EEcCChhHHHHHHHHHhhhccCCCCCCcEEEecCCCCcccccccCCCCCCCCcHHHHHHHHHHHHH
Q 011840 153 VAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRAS 218 (476)
Q Consensus 153 v~GGDGTv~~vln~l~~~~~~~~~~~~plgiIPlGTgNdfarslg~g~~~p~~~~~al~~~l~~i~ 218 (476)
.+|||-|- +++.-+... .....|-+-+|=+|| ||+++..+... +....+.+..+++.+.
T Consensus 57 Gi~G~tt~-~~l~r~~~~---v~~~~Pd~vvi~~G~-ND~~~~~~~~~--~~~~~~~l~~ii~~~~ 115 (209)
T 4hf7_A 57 GISGQTSY-QFLLRFRED---VINLSPALVVINAGT-NDVAENTGAYN--EDYTFGNIASMAELAK 115 (209)
T ss_dssp ECTTCCHH-HHHHHHHHH---TGGGCCSEEEECCCH-HHHTTSSSSCC--HHHHHHHHHHHHHHHH
T ss_pred ccCcccHH-HHHHHHHHH---HHhcCCCEEEEEeCC-CcCcccccccc--HHHHHHHHHHhhHHHh
Confidence 56888664 344444321 012457788898887 99887553210 1122334555555443
No 68
>2r0b_A Serine/threonine/tyrosine-interacting protein; structural genomics, phosphatase, PSI-2, protein structure initiative; 1.60A {Homo sapiens}
Probab=22.62 E-value=16 Score=31.07 Aligned_cols=30 Identities=13% Similarity=-0.013 Sum_probs=24.0
Q ss_pred ehhhhcCCce-eeecccccccccccccchhh
Q 011840 18 DSIRGCGLSG-MRIDKEDLRRKLSIPEYLRV 47 (476)
Q Consensus 18 ~~~~~~~~~~-~~~~~~~~~~~~~~~~y~~~ 47 (476)
+..+..|..+ |||.-|..|+-.++.+||..
T Consensus 84 ~~~~~~~~~vlvHC~aG~~RS~~~~~ayl~~ 114 (154)
T 2r0b_A 84 DGSLQMGGKVLVHGNAGISRSAAFVIAYIME 114 (154)
T ss_dssp HHHHHTTCCEEEECSSSSSHHHHHHHHHHHH
T ss_pred HHHHhcCCCEEEEcCCCCChHHHHHHHHHHH
Confidence 3344556677 99999999999999999875
No 69
>2y96_A Dual specificity phosphatase DUPD1; hydrolase; 2.38A {Homo sapiens}
Probab=22.01 E-value=16 Score=33.61 Aligned_cols=27 Identities=11% Similarity=-0.041 Sum_probs=22.9
Q ss_pred hcCCce-eeecccccccccccccchhhh
Q 011840 22 GCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (476)
Q Consensus 22 ~~~~~~-~~~~~~~~~~~~~~~~y~~~~ 48 (476)
..|..| |||..|..|+-.++.+||...
T Consensus 137 ~~~~~VLVHC~aG~sRS~tvv~aYLm~~ 164 (219)
T 2y96_A 137 DDHSKILVHCVMGRSRSATLVLAYLMIH 164 (219)
T ss_dssp STTCCEEEECSSSSSHHHHHHHHHHHHH
T ss_pred ccCCeEEEECCCCCCHHHHHHHHHHHHH
Confidence 345666 999999999999999999864
No 70
>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}
Probab=21.85 E-value=1.6e+02 Score=33.28 Aligned_cols=46 Identities=15% Similarity=0.139 Sum_probs=31.6
Q ss_pred CcceEEEEcCChhHHHHHHHHHhhhccCCCCCCcEEEecCCCCcccc
Q 011840 147 QKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLS 193 (476)
Q Consensus 147 ~~~~Ivv~GGDGTv~~vln~l~~~~~~~~~~~~plgiIPlGTgNdfa 193 (476)
+-+.+|++|||||..- +..|.+.........+|+--||-==-||++
T Consensus 688 ~Id~LvvIGGdgS~~~-a~~L~~~~~~y~~~~I~vVGIPkTIDNDl~ 733 (989)
T 3opy_A 688 KFDGLIIIGGFEAFTA-LYELDAARAQYPIFNIPMCCLPATVSNNVP 733 (989)
T ss_dssp TCSEEEEEESHHHHHH-HHHHHHHTTTCGGGCSCEEEEEBCSSCCCT
T ss_pred CCCEEEEeCCchHHHH-HHHHHHHHhhCCCcCCcEEeccccccCCCC
Confidence 5689999999999854 345543211000136888889999999986
No 71
>2hxp_A Dual specificity protein phosphatase 9; human phosphatase, structural genomics, PSI-2, protein structure initiative; 1.83A {Homo sapiens} PDB: 3lj8_A 1mkp_A
Probab=21.80 E-value=16 Score=31.30 Aligned_cols=31 Identities=13% Similarity=-0.079 Sum_probs=24.7
Q ss_pred ehhhhcCCce-eeecccccccccccccchhhh
Q 011840 18 DSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (476)
Q Consensus 18 ~~~~~~~~~~-~~~~~~~~~~~~~~~~y~~~~ 48 (476)
+..+..|..+ |||..|..|+-.++.+||...
T Consensus 79 ~~~~~~~~~VlVHC~~G~~RS~~vv~ayLm~~ 110 (155)
T 2hxp_A 79 DEALSQNCGVLVHSLAGVSRSVTVTVAYLMQK 110 (155)
T ss_dssp HHHHHTTCEEEEECSSSSSHHHHHHHHHHHHH
T ss_pred HHHHHcCCcEEEECCCCCchhHHHHHHHHHHH
Confidence 3444556677 999999999999999998753
No 72
>2e0t_A Dual specificity phosphatase 26; conserved hypothetical protein, structural genomics, NPPSFA, project on protein structural and functional analyses; 1.67A {Homo sapiens}
Probab=21.66 E-value=16 Score=30.90 Aligned_cols=26 Identities=15% Similarity=-0.008 Sum_probs=22.0
Q ss_pred cCCce-eeecccccccccccccchhhh
Q 011840 23 CGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (476)
Q Consensus 23 ~~~~~-~~~~~~~~~~~~~~~~y~~~~ 48 (476)
.+..+ |||..|..|+-.++.+||...
T Consensus 84 ~~~~vlVHC~aG~~RSg~~~~ayl~~~ 110 (151)
T 2e0t_A 84 PGGKILVHCAVGVSRSATLVLAYLMLY 110 (151)
T ss_dssp TTCCEEEECSSSSHHHHHHHHHHHHHH
T ss_pred CCCcEEEECCCCCChHHHHHHHHHHHH
Confidence 46666 999999999998888998764
No 73
>2oud_A Dual specificity protein phosphatase 10; A central five-stranded B-sheet, hydrolase; 2.80A {Homo sapiens}
Probab=21.50 E-value=16 Score=32.08 Aligned_cols=30 Identities=17% Similarity=0.227 Sum_probs=24.7
Q ss_pred ehhhhcCCce-eeecccccccccccccchhh
Q 011840 18 DSIRGCGLSG-MRIDKEDLRRKLSIPEYLRV 47 (476)
Q Consensus 18 ~~~~~~~~~~-~~~~~~~~~~~~~~~~y~~~ 47 (476)
+..+..|..+ |||..|-.|+-.++.+||..
T Consensus 81 ~~~~~~~~~VlVHC~aG~~RSg~~v~ayLm~ 111 (177)
T 2oud_A 81 EEAHQCGKGLLIHCQAGVSRSATIVIAYLMK 111 (177)
T ss_dssp HHHHHTTCEEEEECSSSSSHHHHHHHHHHHH
T ss_pred HHHHhcCCcEEEEcCCCCCchHHHHHHHHHH
Confidence 4445556777 99999999999999999985
No 74
>3o8l_A 6-phosphofructokinase, muscle type; transferase; HET: ATP ADP; 3.20A {Oryctolagus cuniculus} PDB: 3o8n_A*
Probab=20.41 E-value=2.1e+02 Score=31.46 Aligned_cols=66 Identities=21% Similarity=0.199 Sum_probs=40.6
Q ss_pred cCcceEEEEcCChhHHHHHHHHHhhhccCCCCCCcEEEecCCCCcccccccCCCCCCCCcHHHHHHHHHHHH
Q 011840 146 RQKMRIVVAGGDGTVGWVLGSVGELNKQGREPVPPVAIIPLGTGNDLSRSFGWGGSFPFAWKSAVKRTLQRA 217 (476)
Q Consensus 146 ~~~~~Ivv~GGDGTv~~vln~l~~~~~~~~~~~~plgiIPlGTgNdfarslg~g~~~p~~~~~al~~~l~~i 217 (476)
.+-+.+|++|||||..-+.. |.+.........+|+--||-==-||++- .++...+..|+..+.+.+
T Consensus 488 ~~Id~LvvIGGdgS~~~a~~-L~~~~~~~~~~~i~vvgiPkTIDNDl~g-----TD~TiGfdTA~~~~~~ai 553 (762)
T 3o8l_A 488 FNIQGLVIIGGFEAYTGGLE-LMEGRKQFDELCIPFVVIPATVSNNVPG-----SDFSVGADTALNTICTTC 553 (762)
T ss_dssp TTCCCEEEEESHHHHHHHHH-HHHHHHHCSTTCSCEEEEEBCTTCCCTT-----CSCCBTHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCchHHHHHHH-HHHHHHhccccCCCEEeeccccCCCCCC-----CcCCCChHHHHHHHHHHH
Confidence 35678999999999876542 2211000012368898999999999973 223333445666555543
No 75
>1yz4_A DUSP15, dual specificity phosphatase-like 15 isoform A; hydrolase; HET: BOG; 2.40A {Homo sapiens}
Probab=20.26 E-value=20 Score=30.72 Aligned_cols=31 Identities=13% Similarity=0.008 Sum_probs=24.1
Q ss_pred ehhhhcCCce-eeecccccccccccccchhhh
Q 011840 18 DSIRGCGLSG-MRIDKEDLRRKLSIPEYLRVA 48 (476)
Q Consensus 18 ~~~~~~~~~~-~~~~~~~~~~~~~~~~y~~~~ 48 (476)
+..+..|..+ |||..|-.|+-.++.+||...
T Consensus 78 ~~~~~~~~~VlVHC~aG~~RSg~~~~aylm~~ 109 (160)
T 1yz4_A 78 HCCRLNGGNCLVHSFAGISRSTTIVTAYVMTV 109 (160)
T ss_dssp HHHHHTTCCEEEEETTSSSHHHHHHHHHHHHH
T ss_pred HHHHHcCCeEEEECCCCCchHHHHHHHHHHHH
Confidence 3444456677 999999999998888998653
Done!