Your job contains 1 sequence.
>011841
MASPPDTSKTIKLERYNSYLRRLHVTKMLHSSSKLFFRATILIALVLILFFTLNHPPLSD
NTGESGDNNSNNKNNPRNLFTHQHSLLSSSFFSSSFSTGGAEWEKQVRHSATPRRPNGMT
VLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGDLN
DAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQPSI
VWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRFFTV
YGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGALDTAGKST
GSGGKKRGPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAKKHVIRMPRNGDVPYTHANV
SLAYKDFGYKPTTDLAAGLRKFVKWYVSYYGIQPRVKKENGFSTTTSTIQHPDESA
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 011841
(476 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2076066 - symbol:GAE6 "UDP-D-glucuronate 4-epi... 1848 1.1e-190 1
TAIR|locus:2050921 - symbol:GAE4 "UDP-D-glucuronate 4-epi... 1401 2.5e-147 2
TAIR|locus:2025472 - symbol:GAE2 "UDP-D-glucuronate 4-epi... 1399 4.2e-143 1
TAIR|locus:2126846 - symbol:GAE3 "UDP-D-glucuronate 4-epi... 1392 2.3e-142 1
TAIR|locus:2139134 - symbol:GAE5 "UDP-D-glucuronate 4-epi... 1392 2.3e-142 1
TAIR|locus:2118711 - symbol:GAE1 "UDP-D-glucuronate 4-epi... 1360 5.6e-139 1
TIGR_CMR|GSU_2241 - symbol:GSU_2241 "capsular polysacchar... 796 3.3e-79 1
TIGR_CMR|CBU_0844 - symbol:CBU_0844 "capsular polysacchar... 773 9.0e-77 1
UNIPROTKB|Q8E8H8 - symbol:wcvA "UDP-glucuronate 4-epimera... 741 2.2e-73 1
TIGR_CMR|SO_4686 - symbol:SO_4686 "NAD dependent epimeras... 741 2.2e-73 1
UNIPROTKB|Q489C2 - symbol:CPS_0592 "Capsular polysacchari... 694 2.1e-68 1
TIGR_CMR|CPS_0592 - symbol:CPS_0592 "capsular polysacchar... 694 2.1e-68 1
UNIPROTKB|Q0BYW6 - symbol:HNE_2639 "UDP-glucuronate 5'-ep... 647 2.0e-63 1
UNIPROTKB|Q8ECF3 - symbol:wbpP "UDP-GlkcNAc C4 epimerase ... 335 2.3e-30 1
TIGR_CMR|SO_3189 - symbol:SO_3189 "polysaccharide biosynt... 335 2.3e-30 1
UNIPROTKB|Q6MWV3 - symbol:galE1 "UDP-glucose 4-epimerase"... 310 1.0e-27 1
UNIPROTKB|Q47Y09 - symbol:CPS_3643 "NAD-dependent epimera... 290 1.9e-25 1
TIGR_CMR|CPS_3643 - symbol:CPS_3643 "NAD-dependent epimer... 290 1.9e-25 1
ZFIN|ZDB-GENE-060421-6479 - symbol:gale "UDP-galactose-4-... 279 3.7e-24 1
TIGR_CMR|CBU_0677 - symbol:CBU_0677 "NAD dependent epimer... 242 3.4e-23 2
WB|WBGene00008132 - symbol:gale-1 species:6239 "Caenorhab... 269 5.2e-23 1
UNIPROTKB|I3LL84 - symbol:GALE "Uncharacterized protein" ... 266 1.1e-22 1
UNIPROTKB|F1PI88 - symbol:GALE "Uncharacterized protein" ... 262 3.2e-22 1
UNIPROTKB|Q3T105 - symbol:GALE "Uncharacterized protein" ... 259 7.0e-22 1
UNIPROTKB|Q14376 - symbol:GALE "UDP-glucose 4-epimerase" ... 258 9.1e-22 1
UNIPROTKB|Q4QRB0 - symbol:Gale "Gale protein" species:101... 258 9.1e-22 1
TIGR_CMR|CBU_0829 - symbol:CBU_0829 "NAD dependent epimer... 255 2.0e-21 1
TIGR_CMR|CJE_1513 - symbol:CJE_1513 "NAD-dependent epimer... 255 2.0e-21 1
TIGR_CMR|CHY_0545 - symbol:CHY_0545 "UDP-glucose 4-epimer... 248 1.2e-20 1
MGI|MGI:1921496 - symbol:Gale "galactose-4-epimerase, UDP... 252 2.1e-20 1
UNIPROTKB|F1NWE5 - symbol:GALE "Uncharacterized protein" ... 253 2.7e-20 1
TIGR_CMR|DET_0204 - symbol:DET_0204 "NAD-dependent epimer... 243 4.3e-20 1
UNIPROTKB|P09147 - symbol:galE species:83333 "Escherichia... 247 4.7e-20 1
TAIR|locus:2138121 - symbol:UGE2 "UDP-D-glucose/UDP-D-gal... 250 7.9e-20 1
UNIPROTKB|Q6A1A4 - symbol:galE "UDP-galactose 4-epimerase... 238 2.3e-18 1
UNIPROTKB|Q9KLH0 - symbol:VC_A0774 "UDP-glucose 4-epimera... 237 3.2e-18 1
TIGR_CMR|VC_A0774 - symbol:VC_A0774 "UDP-glucose 4-epimer... 237 3.2e-18 1
TIGR_CMR|SO_3167 - symbol:SO_3167 "dTDP-glucose 4,6-dehyd... 237 4.2e-18 1
TIGR_CMR|BA_0507 - symbol:BA_0507 "NAD-dependent epimeras... 232 4.3e-18 1
TAIR|locus:2010371 - symbol:UGE1 "UDP-D-glucose/UDP-D-gal... 238 4.4e-18 1
TIGR_CMR|GSU_1815 - symbol:GSU_1815 "NAD-dependent epimer... 227 7.7e-18 1
TIGR_CMR|BA_1230 - symbol:BA_1230 "dTDP-glucose 4,6-dehyd... 229 1.7e-17 1
RGD|621493 - symbol:Gale "UDP-galactose-4-epimerase" spec... 233 1.7e-17 1
TAIR|locus:2123466 - symbol:UGE5 "UDP-D-glucose/UDP-D-gal... 230 4.7e-17 1
TIGR_CMR|GSU_1975 - symbol:GSU_1975 "NAD-dependent epimer... 227 7.2e-17 1
TAIR|locus:2015253 - symbol:UGE3 "UDP-D-glucose/UDP-D-gal... 228 8.1e-17 1
TAIR|locus:2204639 - symbol:MUR4 "MURUS 4" species:3702 "... 230 1.3e-16 1
TAIR|locus:2099372 - symbol:RHM3 "rhamnose biosynthesis 3... 231 3.2e-16 1
TIGR_CMR|CJE_1287 - symbol:CJE_1287 "ADP-L-glycero-D-mann... 219 3.9e-16 1
FB|FBgn0035147 - symbol:Gale "UDP-galactose 4'-epimerase"... 222 4.5e-16 1
TAIR|locus:2163401 - symbol:DUR "DEFECTIVE UGE IN ROOT" s... 223 9.4e-16 1
CGD|CAL0000448 - symbol:GAL10 species:5476 "Candida albic... 226 1.2e-15 1
UNIPROTKB|Q59VY6 - symbol:GAL10 "Putative uncharacterized... 226 1.2e-15 1
TIGR_CMR|CHY_0979 - symbol:CHY_0979 "dTDP-glucose 4,6-deh... 213 1.8e-15 1
TAIR|locus:2202960 - symbol:RHM1 "rhamnose biosynthesis 1... 224 2.0e-15 1
ZFIN|ZDB-GENE-030131-5718 - symbol:tgds "TDP-glucose 4,6-... 216 2.3e-15 1
UNIPROTKB|F1RP60 - symbol:TGDS "Uncharacterized protein" ... 215 3.4e-15 1
POMBASE|SPBPB2B2.12c - symbol:gal10 species:4896 "Schizos... 222 3.8e-15 1
UNIPROTKB|Q5QPP1 - symbol:GALE "UDP-glucose 4-epimerase" ... 198 3.9e-15 1
UNIPROTKB|Q5QPP2 - symbol:GALE "UDP-glucose 4-epimerase" ... 198 3.9e-15 1
POMBASE|SPBC365.14c - symbol:uge1 "UDP-glucose 4-epimeras... 214 4.4e-15 1
UNIPROTKB|F1P029 - symbol:TGDS "Uncharacterized protein" ... 213 6.8e-15 1
TIGR_CMR|BA_5700 - symbol:BA_5700 "UDP-glucose 4-epimeras... 211 7.5e-15 1
UNIPROTKB|A6QLW2 - symbol:TGDS "dTDP-D-glucose 4,6-dehydr... 212 7.7e-15 1
UNIPROTKB|O95455 - symbol:TGDS "dTDP-D-glucose 4,6-dehydr... 211 9.3e-15 1
UNIPROTKB|G4MX57 - symbol:MGG_08012 "UDP-glucose 4-epimer... 174 1.2e-14 2
UNIPROTKB|B0RVL0 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 210 1.3e-14 1
UNIPROTKB|P0C7J0 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 210 1.3e-14 1
TIGR_CMR|SO_1664 - symbol:SO_1664 "UDP-glucose 4-epimeras... 209 1.3e-14 1
TAIR|locus:2014235 - symbol:RHD1 "ROOT HAIR DEFECTIVE 1" ... 206 3.6e-14 1
TIGR_CMR|CPS_2147 - symbol:CPS_2147 "UDP-glucose 4-epimer... 205 4.2e-14 1
MGI|MGI:1923605 - symbol:Tgds "TDP-glucose 4,6-dehydratas... 205 5.2e-14 1
UNIPROTKB|P44914 - symbol:rffG "dTDP-glucose 4,6-dehydrat... 203 6.9e-14 1
UNIPROTKB|Q9ZAE8 - symbol:acbB "dTDP-glucose 4,6-dehydrat... 200 1.1e-13 1
RGD|1306544 - symbol:Tgds "TDP-glucose 4,6-dehydratase" s... 202 1.2e-13 1
DICTYBASE|DDB_G0279465 - symbol:tgds "putative dTDP-D-glu... 204 2.3e-13 2
FB|FBgn0035848 - symbol:CG7979 species:7227 "Drosophila m... 202 2.4e-13 1
TAIR|locus:2024902 - symbol:MUM4 "MUCILAGE-MODIFIED 4" sp... 205 2.6e-13 1
TAIR|locus:2168539 - symbol:UXS3 "UDP-glucuronic acid dec... 199 2.7e-13 1
TIGR_CMR|BA_5505 - symbol:BA_5505 "UDP-glucose 4-epimeras... 197 3.1e-13 1
UNIPROTKB|P29782 - symbol:strE "dTDP-glucose 4,6-dehydrat... 196 4.1e-13 1
UNIPROTKB|A0QSK6 - symbol:rmlB "dTDP-glucose 4,6-dehydrat... 187 5.0e-13 2
UNIPROTKB|E2QWQ8 - symbol:TGDS "Uncharacterized protein" ... 196 5.8e-13 1
UNIPROTKB|Q9S642 - symbol:rfbB1 "dTDP-glucose 4,6-dehydra... 195 6.4e-13 1
SGD|S000000223 - symbol:GAL10 "UDP-glucose-4-epimerase" s... 201 7.9e-13 1
UNIPROTKB|P26391 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 195 8.1e-13 1
TIGR_CMR|GSU_2366 - symbol:GSU_2366 "dTDP-glucose 4,6-deh... 194 1.0e-12 1
UNIPROTKB|O06329 - symbol:rmlB "dTDP-glucose 4,6-dehydrat... 184 1.2e-12 2
UNIPROTKB|P55294 - symbol:rfbB1 "dTDP-glucose 4,6-dehydra... 192 1.7e-12 1
TAIR|locus:2078206 - symbol:UXS5 "UDP-XYL synthase 5" spe... 189 3.2e-12 1
TAIR|locus:2053275 - symbol:UXS6 "UDP-XYL synthase 6" spe... 189 3.3e-12 1
UNIPROTKB|P27830 - symbol:rffG "dTDP-glucose 4,6-dehydrat... 189 3.7e-12 1
UNIPROTKB|Q0C421 - symbol:HNE_0794 "Putative GDP-6-deoxy-... 187 4.4e-12 1
DICTYBASE|DDB_G0275295 - symbol:galE "UDP-glucose 4-epime... 186 7.3e-12 1
UNIPROTKB|P37759 - symbol:rfbB "RmlB" species:83333 "Esch... 120 8.7e-12 2
WB|WBGene00005019 - symbol:sqv-1 species:6239 "Caenorhabd... 187 1.3e-11 1
UNIPROTKB|B3KV61 - symbol:UXS1 "UDP-glucuronate decarboxy... 183 2.0e-11 1
WB|WBGene00018737 - symbol:F53B1.4 species:6239 "Caenorha... 182 2.1e-11 1
UNIPROTKB|P37761 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 182 2.2e-11 1
TIGR_CMR|GSU_2240 - symbol:GSU_2240 "UDP-glucose 4-epimer... 181 2.3e-11 1
WARNING: Descriptions of 96 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2076066 [details] [associations]
symbol:GAE6 "UDP-D-glucuronate 4-epimerase 6"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM;IDA]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006569 "tryptophan catabolic process" evidence=RCA]
[GO:0009684 "indoleacetic acid biosynthetic process" evidence=RCA]
[GO:0005768 "endosome" evidence=IDA] [GO:0005802 "trans-Golgi
network" evidence=IDA] InterPro:IPR001509 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040 GO:GO:0016021
GO:GO:0005794 EMBL:CP002686 GenomeReviews:BA000014_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005975 GO:GO:0005768 GO:GO:0032580 GO:GO:0044237
GO:GO:0005802 EMBL:AP001297 HSSP:P04397 HOGENOM:HOG000168000
KO:K08679 ProtClustDB:CLSN2679288 GO:GO:0050378 EMBL:AJ879893
EMBL:AF083691 EMBL:AF370210 EMBL:AY056117 EMBL:AY062625
EMBL:AY133771 IPI:IPI00538638 RefSeq:NP_189024.1 UniGene:At.24934
UniGene:At.67131 UniGene:At.71799 ProteinModelPortal:Q9LIS3
SMR:Q9LIS3 IntAct:Q9LIS3 STRING:Q9LIS3 PaxDb:Q9LIS3 PRIDE:Q9LIS3
EnsemblPlants:AT3G23820.1 GeneID:821965 KEGG:ath:AT3G23820
TAIR:At3g23820 InParanoid:Q9LIS3 OMA:NTAMPFS PhylomeDB:Q9LIS3
BRENDA:5.1.3.6 Genevestigator:Q9LIS3 Uniprot:Q9LIS3
Length = 460
Score = 1848 (655.6 bits), Expect = 1.1e-190, P = 1.1e-190
Identities = 349/459 (76%), Positives = 391/459 (85%)
Query: 1 MASPPDTSKTIKLERYNSYLRRLHVTKMLHSSSKLFFRATILIALVLILFFTLNHPPLSD 60
+++ DTSKT+KLERYNSYLR++H TK+L++SSK+ FRAT+L+ALVL+L F +N+PPLSD
Sbjct: 3 LSATADTSKTVKLERYNSYLRKIHSTKVLNASSKVLFRATLLVALVLVLIFAINYPPLSD 62
Query: 61 NTGESGDXXXXXXXXXXXLFTHQHXXXXXXXXXXXXXTGGAEWEKQVRHSATPRRPNGMT 120
+ + LF+ GGA WEK+VR S+T +RP+G++
Sbjct: 63 SRAAAAHHLHRRSFLSTGLFS---------SSSSSSSIGGAAWEKRVRQSSTAKRPHGLS 113
Query: 121 VLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGDLN 180
VLVTGAAGFVGSHCSLAL+KRGDGVLG DNFN YYDPSLKRARQ+LL+K QVFIVEGDLN
Sbjct: 114 VLVTGAAGFVGSHCSLALRKRGDGVLGFDNFNDYYDPSLKRARQELLEKQQVFIVEGDLN 173
Query: 181 DAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQPSI 240
D PLL KLFDVVPFTH+LHLAAQAGVRYAM+NPQSY+ASNIAGFVNLLEV K+ NPQP+I
Sbjct: 174 DGPLLRKLFDVVPFTHILHLAAQAGVRYAMKNPQSYIASNIAGFVNLLEVAKAANPQPAI 233
Query: 241 VWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRFFTV 300
VWASSSSVYGLNT+ PFSE HRTDQPASLYAATKKAGEEIAHTYNHIYGL+LTGLRFFTV
Sbjct: 234 VWASSSSVYGLNTENPFSEEHRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTV 293
Query: 301 YGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGALDTAXXXX 360
YGPWGRPDMAYFFFTKDIL GK+ID+Y+TQD++EVARDFTYIDD+VKGCVGALDTA
Sbjct: 294 YGPWGRPDMAYFFFTKDILHGKSIDIYRTQDNQEVARDFTYIDDIVKGCVGALDTAEKST 353
Query: 361 XXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAKKHVIRMPRNGDVPYTHANV 420
AQLRVYNLGNTSPVPVGRLVSILE LL TKAKKH+I+MPRNGDVPYTHANV
Sbjct: 354 GSGGKKRGQAQLRVYNLGNTSPVPVGRLVSILEGLLGTKAKKHLIKMPRNGDVPYTHANV 413
Query: 421 SLAYKDFGYKPTTDLAAGLRKFVKWYVSYYGIQPRVKKE 459
SLAYKDFGYKPTTDLAAGLRKFVKWYV YYGIQPRVKKE
Sbjct: 414 SLAYKDFGYKPTTDLAAGLRKFVKWYVGYYGIQPRVKKE 452
>TAIR|locus:2050921 [details] [associations]
symbol:GAE4 "UDP-D-glucuronate 4-epimerase 4"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370
PRINTS:PR01713 InterPro:IPR016040 GO:GO:0016021 EMBL:CP002685
GenomeReviews:CT485783_GR eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975 GO:GO:0032580
GO:GO:0044237 EMBL:AC002387 HOGENOM:HOG000168000 KO:K08679
ProtClustDB:CLSN2679288 GO:GO:0050378 HSSP:Q14376 EMBL:AY594693
EMBL:BT005652 EMBL:BT004225 IPI:IPI00535089 PIR:A84889
RefSeq:NP_182056.1 UniGene:At.66419 ProteinModelPortal:O22141
SMR:O22141 STRING:O22141 PaxDb:O22141 PRIDE:O22141
EnsemblPlants:AT2G45310.1 GeneID:819139 KEGG:ath:AT2G45310
TAIR:At2g45310 InParanoid:O22141 OMA:IFESANH PhylomeDB:O22141
BioCyc:MetaCyc:AT2G45310-MONOMER Genevestigator:O22141
Uniprot:O22141
Length = 437
Score = 1401 (498.2 bits), Expect = 2.5e-147, Sum P(2) = 2.5e-147
Identities = 262/354 (74%), Positives = 301/354 (85%)
Query: 99 GGAEWEKQVRHSATPRRP--NGMTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYD 156
GG WEK++R SA R NG+TVLVTGAAGFVG+H S ALK+RGDGV+GLDNFN YYD
Sbjct: 75 GGPAWEKRLRSSARIRTSTNNGITVLVTGAAGFVGTHVSAALKRRGDGVIGLDNFNDYYD 134
Query: 157 PSLKRARQKLLQKHQVFIVEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSY 216
PSLKRAR+ LL++ +FIVEGD+ND LL KLF +V FTHV+HLAAQAGVRYAM+NP SY
Sbjct: 135 PSLKRARRALLERSGIFIVEGDINDVELLRKLFKIVSFTHVMHLAAQAGVRYAMENPSSY 194
Query: 217 VASNIAGFVNLLEVCKSVNPQPSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKA 276
V SNIAGFVNLLE+CKSVNPQP+IVWASSSSVYGLNT+VPFSE +TDQPASLYAATKKA
Sbjct: 195 VHSNIAGFVNLLEICKSVNPQPAIVWASSSSVYGLNTKVPFSEKDKTDQPASLYAATKKA 254
Query: 277 GEEIAHTYNHIYGLALTGLRFFTVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVA 336
GEEIAHTYNHIYGL+LTGLRFFTVYGPWGRPDMAYFFFTKDIL+GK+I ++++ + VA
Sbjct: 255 GEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTKDILKGKSISIFESANHGTVA 314
Query: 337 RDFTYIDDVVKGCVGALDTAXXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILENLL 396
RDFTYIDD+VKGC+ ALDTA PAQLRV+NLGNTSPVPV LV ILE L
Sbjct: 315 RDFTYIDDIVKGCLAALDTAEKSTGSGGKKRGPAQLRVFNLGNTSPVPVSDLVRILERQL 374
Query: 397 NTKAKKHVIRMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKWYVSYY 450
KAKK++I+MPRNGDVP+THAN+SLA ++ GYKPTTDL GL+KFV+WY+SYY
Sbjct: 375 KVKAKKNLIKMPRNGDVPFTHANISLAQRELGYKPTTDLQTGLKKFVRWYLSYY 428
Score = 59 (25.8 bits), Expect = 2.5e-147, Sum P(2) = 2.5e-147
Identities = 21/63 (33%), Positives = 30/63 (47%)
Query: 5 PDTSKTIKLERYNSYLRRLHVTKMLHSSSKLFFRATILIALVLILFFTLNHPPLSDNTGE 64
P + K+E+ +SYL RL L +K F + L+ L+ +LF L PP S N
Sbjct: 8 PSSPGKFKMEK-SSYLHRLRFQSSL---TKFAFFSFFLLCLISLLF--LRSPP-SINPSS 60
Query: 65 SGD 67
D
Sbjct: 61 PSD 63
>TAIR|locus:2025472 [details] [associations]
symbol:GAE2 "UDP-D-glucuronate 4-epimerase 2"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=ISS] InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370
PRINTS:PR01713 InterPro:IPR016040 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975 GO:GO:0032580
GO:GO:0044237 EMBL:AC020622 HOGENOM:HOG000168000 KO:K08679
ProtClustDB:CLSN2679288 GO:GO:0050378 EMBL:AF334734 EMBL:AY084754
EMBL:AK228396 IPI:IPI00543208 PIR:A86152 RefSeq:NP_171702.1
UniGene:At.17005 ProteinModelPortal:Q9LPC1 SMR:Q9LPC1 STRING:Q9LPC1
PaxDb:Q9LPC1 PRIDE:Q9LPC1 EnsemblPlants:AT1G02000.1 GeneID:839289
KEGG:ath:AT1G02000 TAIR:At1g02000 InParanoid:Q9LPC1 OMA:LFKFVDA
PhylomeDB:Q9LPC1 Genevestigator:Q9LPC1 Uniprot:Q9LPC1
Length = 434
Score = 1399 (497.5 bits), Expect = 4.2e-143, P = 4.2e-143
Identities = 262/352 (74%), Positives = 300/352 (85%)
Query: 99 GGAEWEKQVRHSATPRRPNGMTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPS 158
GG WEK+VR SA R NG++VLVTGAAGFVG+H S ALK+RGDGVLGLDNFN YYD S
Sbjct: 72 GGPAWEKRVRSSARVRTRNGVSVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDTS 131
Query: 159 LKRARQKLLQKHQVFIVEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVA 218
LKR+RQ LL++ VFIVEGD+ND LL KLF+VVPFTHV+HLAAQAGVRYAM+NP SYV
Sbjct: 132 LKRSRQALLERSGVFIVEGDINDLSLLKKLFEVVPFTHVMHLAAQAGVRYAMENPGSYVH 191
Query: 219 SNIAGFVNLLEVCKSVNPQPSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGE 278
SNIAGFVNLLEVCKS NPQP+IVWASSSSVYGLNT+VPFSE RTDQPASLYAATKKAGE
Sbjct: 192 SNIAGFVNLLEVCKSANPQPAIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGE 251
Query: 279 EIAHTYNHIYGLALTGLRFFTVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARD 338
EIAHTYNHIYGL+LTGLRFFTVYGPWGRPDMAYFFFT+DIL+GK I +++ + VARD
Sbjct: 252 EIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTRDILKGKAISIFEGANHGTVARD 311
Query: 339 FTYIDDVVKGCVGALDTAXXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILENLLNT 398
FTYIDD+VKGC+GALDTA AQLRV+NLGNTSPVPV LVSILE LL
Sbjct: 312 FTYIDDIVKGCLGALDTAEKSTGSGGKKRGAAQLRVFNLGNTSPVPVTDLVSILERLLKV 371
Query: 399 KAKKHVIRMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKWYVSYY 450
KAK++++++PRNGDVP+THAN+S A ++FGYKP+TDL GL+KFV+WY+ YY
Sbjct: 372 KAKRNMMKLPRNGDVPFTHANISSAQREFGYKPSTDLQTGLKKFVRWYLGYY 423
>TAIR|locus:2126846 [details] [associations]
symbol:GAE3 "UDP-D-glucuronate 4-epimerase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0016020 "membrane" evidence=TAS] [GO:0050378
"UDP-glucuronate 4-epimerase activity" evidence=ISS]
InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0016021 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0016020 eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975
GO:GO:0032580 GO:GO:0044237 EMBL:AL161471 EMBL:AF069299
HOGENOM:HOG000168000 KO:K08679 ProtClustDB:CLSN2679288
GO:GO:0050378 EMBL:BT026487 IPI:IPI00527699 PIR:T01339
RefSeq:NP_191922.1 UniGene:At.27610 HSSP:Q14376
ProteinModelPortal:O81312 SMR:O81312 STRING:O81312 PaxDb:O81312
PRIDE:O81312 EnsemblPlants:AT4G00110.1 GeneID:828145
KEGG:ath:AT4G00110 TAIR:At4g00110 InParanoid:O81312 OMA:KWWSRVL
PhylomeDB:O81312 Genevestigator:O81312 Uniprot:O81312
Length = 430
Score = 1392 (495.1 bits), Expect = 2.3e-142, P = 2.3e-142
Identities = 260/352 (73%), Positives = 297/352 (84%)
Query: 99 GGAEWEKQVRHSATPRRPNGMTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPS 158
GG WEK+VR SA R G +VLVTGAAGFVG+H S ALK+RGDGVLGLDNFN YYDPS
Sbjct: 71 GGPAWEKRVRSSARLRTRRGFSVLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPS 130
Query: 159 LKRARQKLLQKHQVFIVEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVA 218
LKRARQ LL++ VF+VEGD+NDA LL KLF+VVPFTHV+HLAAQAGVRYAM+NP SYV
Sbjct: 131 LKRARQALLERSGVFVVEGDINDAALLKKLFEVVPFTHVMHLAAQAGVRYAMENPSSYVH 190
Query: 219 SNIAGFVNLLEVCKSVNPQPSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGE 278
SNIAGFVNLLEVCKS NPQP+IVWASSSSVYGLNT+VPFSE RTDQPASLYAATKKAGE
Sbjct: 191 SNIAGFVNLLEVCKSANPQPAIVWASSSSVYGLNTKVPFSEKDRTDQPASLYAATKKAGE 250
Query: 279 EIAHTYNHIYGLALTGLRFFTVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARD 338
EIAHTYNHIYGL+LTGLRFFTVYGPWGRPDMAYFFFT+DIL+GK I +++ + VARD
Sbjct: 251 EIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTRDILKGKAISIFEGVNHGTVARD 310
Query: 339 FTYIDDVVKGCVGALDTAXXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILENLLNT 398
FTYIDD+VKGC+GALDTA AQLRV+NLGNTSPVPV LV+ILE LL
Sbjct: 311 FTYIDDIVKGCLGALDTAEKSTGSGGKKRGAAQLRVFNLGNTSPVPVTDLVTILERLLKV 370
Query: 399 KAKKHVIRMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKWYVSYY 450
KAK++++++PRNGDV +THAN+S A ++ GYKPTTDL GL+KF +WY+ YY
Sbjct: 371 KAKRNIMKLPRNGDVQFTHANISSAQRELGYKPTTDLQTGLKKFARWYLGYY 422
>TAIR|locus:2139134 [details] [associations]
symbol:GAE5 "UDP-D-glucuronate 4-epimerase 5"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM;IDA]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=ISS] [GO:0016036 "cellular response to phosphate
starvation" evidence=RCA] [GO:0019375 "galactolipid biosynthetic
process" evidence=RCA] [GO:0042631 "cellular response to water
deprivation" evidence=RCA] [GO:0005768 "endosome" evidence=IDA]
[GO:0005802 "trans-Golgi network" evidence=IDA] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0016021 GO:GO:0005794 EMBL:CP002687 GenomeReviews:CT486007_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005975 GO:GO:0005768 GO:GO:0032580 GO:GO:0044237
GO:GO:0005802 EMBL:AL161533 EMBL:AL080318 HOGENOM:HOG000168000
KO:K08679 ProtClustDB:CLSN2679288 GO:GO:0050378 HSSP:Q14376
EMBL:AY050993 EMBL:AY150403 IPI:IPI00529597 PIR:T48135
RefSeq:NP_192962.1 UniGene:At.48849 UniGene:At.66589
ProteinModelPortal:Q9STI6 SMR:Q9STI6 STRING:Q9STI6 PRIDE:Q9STI6
EnsemblPlants:AT4G12250.1 GeneID:826833 KEGG:ath:AT4G12250
TAIR:At4g12250 InParanoid:Q9STI6 OMA:RAYRQQM PhylomeDB:Q9STI6
Genevestigator:Q9STI6 Uniprot:Q9STI6
Length = 436
Score = 1392 (495.1 bits), Expect = 2.3e-142, P = 2.3e-142
Identities = 261/352 (74%), Positives = 296/352 (84%)
Query: 99 GGAEWEKQVRHSATPRRPNGMTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPS 158
GG+ WEKQVR SA PR G+TVLVTGA+GFVG+H S+AL++RGDGVLGLDNFN YYDP
Sbjct: 76 GGSHWEKQVRKSARPRSHGGLTVLVTGASGFVGTHVSIALRRRGDGVLGLDNFNRYYDPK 135
Query: 159 LKRARQKLLQKHQVFIVEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVA 218
LKRARQ LL++ VF+VEGD+NDA LL KLFDVV FTHV+HLAAQAGVRYAMQNP SYV
Sbjct: 136 LKRARQGLLERSGVFVVEGDINDAVLLRKLFDVVLFTHVMHLAAQAGVRYAMQNPGSYVN 195
Query: 219 SNIAGFVNLLEVCKSVNPQPSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGE 278
SNIAGFVNLLEV KS NPQP+IVWASSSSVYGLN++VPFSE RTDQPASLYAATKKAGE
Sbjct: 196 SNIAGFVNLLEVSKSANPQPAIVWASSSSVYGLNSKVPFSEKDRTDQPASLYAATKKAGE 255
Query: 279 EIAHTYNHIYGLALTGLRFFTVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARD 338
IAHTYNHIYGL+LTGLRFFTVYGPWGRPDMAYFFFTKDIL+GKTI V+++ D VARD
Sbjct: 256 GIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTKDILKGKTITVFESPDKGSVARD 315
Query: 339 FTYIDDVVKGCVGALDTAXXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILENLLNT 398
FTYIDD+VKGC+GALDTA PA R+YNLGNTSPVPV +LV+ILE LL
Sbjct: 316 FTYIDDIVKGCLGALDTAEKSTGSGGKKKGPAMFRIYNLGNTSPVPVTKLVTILEKLLKM 375
Query: 399 KAKKHVIRMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKWYVSYY 450
KAKK ++ +PRNGDV +THAN++LA + GYKP DL GL+KFVKWY+ +Y
Sbjct: 376 KAKKKIMPLPRNGDVEFTHANITLAQAELGYKPAVDLETGLKKFVKWYMGFY 427
>TAIR|locus:2118711 [details] [associations]
symbol:GAE1 "UDP-D-glucuronate 4-epimerase 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM;IDA]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=IDA] [GO:0005768 "endosome" evidence=IDA] [GO:0005802
"trans-Golgi network" evidence=IDA] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0016021 GO:GO:0005794 EMBL:CP002687 GenomeReviews:CT486007_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005975 GO:GO:0005768 GO:GO:0032580 GO:GO:0044237
GO:GO:0005802 EMBL:AL161577 EMBL:AY661562 EMBL:AY056303
EMBL:AY099855 EMBL:BT000308 EMBL:AY085505 IPI:IPI00530645
PIR:A85356 RefSeq:NP_194773.1 UniGene:At.20969 UniGene:At.67043
HSSP:P04397 ProteinModelPortal:Q9M0B6 SMR:Q9M0B6 STRING:Q9M0B6
PaxDb:Q9M0B6 PRIDE:Q9M0B6 EnsemblPlants:AT4G30440.1 GeneID:829167
KEGG:ath:AT4G30440 TAIR:At4g30440 HOGENOM:HOG000168000
InParanoid:Q9M0B6 KO:K08679 OMA:DELMSET PhylomeDB:Q9M0B6
ProtClustDB:CLSN2679288 Genevestigator:Q9M0B6 GO:GO:0050378
Uniprot:Q9M0B6
Length = 429
Score = 1360 (483.8 bits), Expect = 5.6e-139, P = 5.6e-139
Identities = 253/359 (70%), Positives = 295/359 (82%)
Query: 99 GGAEWEKQVRHSATPRRPNGMTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPS 158
GG +WEKQVR SA R G++VLVTGA GFVGSH SLAL+KRGDGV+GLDNFN+YYDPS
Sbjct: 68 GGIQWEKQVRTSAQIHRSGGISVLVTGATGFVGSHVSLALRKRGDGVVGLDNFNNYYDPS 127
Query: 159 LKRARQKLLQKHQVFIVEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVA 218
LKRAR+ LL +F+VEGDLNDA LL KLFDVV FTHV+HLAAQAGVRYA++NPQSYV
Sbjct: 128 LKRARRSLLSSRGIFVVEGDLNDAKLLAKLFDVVAFTHVMHLAAQAGVRYALENPQSYVH 187
Query: 219 SNIAGFVNLLEVCKSVNPQPSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGE 278
SNIAG VNLLE+CK+ NPQP+IVWASSSSVYGLN +VPFSES RTDQPASLYAATKKAGE
Sbjct: 188 SNIAGLVNLLEICKAANPQPAIVWASSSSVYGLNEKVPFSESDRTDQPASLYAATKKAGE 247
Query: 279 EIAHTYNHIYGLALTGLRFFTVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARD 338
EI HTYNHIYGLA+TGLRFFTVYGPWGRPDMAYF FT++ILQGK I +Y+ ++ ++ARD
Sbjct: 248 EITHTYNHIYGLAITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITIYRGKNRVDLARD 307
Query: 339 FTYIDDVVKGCVGALDTAXXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILENLLNT 398
FTYIDD+VKGC+G+LD++ A R++NLGNTSPV V LV ILE L
Sbjct: 308 FTYIDDIVKGCLGSLDSSGKSTGSGGKKRGAAPYRIFNLGNTSPVTVPILVDILEKHLKV 367
Query: 399 KAKKHVIRMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKWYVSYYGIQPRVK 457
KAK++ + MP NGDVP+THAN+S A +FGYKPTTDL GL+KFV+WY+SYYG + K
Sbjct: 368 KAKRNFVEMPGNGDVPFTHANISSARNEFGYKPTTDLETGLKKFVRWYLSYYGYNTKAK 426
>TIGR_CMR|GSU_2241 [details] [associations]
symbol:GSU_2241 "capsular polysaccharide biosynthesis
protein I" species:243231 "Geobacter sulfurreducens PCA"
[GO:0000271 "polysaccharide biosynthetic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0044237 GO:GO:0016857
HOGENOM:HOG000168000 KO:K08679 OMA:NTAMPFS RefSeq:NP_953290.1
ProteinModelPortal:Q74AV9 GeneID:2687517 KEGG:gsu:GSU2241
PATRIC:22027337 ProtClustDB:CLSK746800
BioCyc:GSUL243231:GH27-2213-MONOMER Uniprot:Q74AV9
Length = 336
Score = 796 (285.3 bits), Expect = 3.3e-79, P = 3.3e-79
Identities = 165/339 (48%), Positives = 218/339 (64%)
Query: 120 TVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVF-IVEGD 178
++LVTGAAGF+G H + L RGD V+GLDN N YYD +LK R + L+ + F V
Sbjct: 3 SILVTGAAGFIGFHLTKRLLDRGDRVVGLDNLNDYYDVNLKLDRLRQLEGREGFSFVRTS 62
Query: 179 LNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQP 238
L D P L LF F V++LAAQAGVRY++ NP +YV SN+ GF+N+LE C+ +
Sbjct: 63 LADRPALEDLFAGQRFDVVVNLAAQAGVRYSITNPHAYVDSNLVGFINILEGCRHHGVK- 121
Query: 239 SIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRFF 298
+V+ASSSSVYG NT +PFS H D P SLYAATKKA E +AHTY+ +YGL TGLRFF
Sbjct: 122 HLVYASSSSVYGANTAMPFSIHHNVDHPVSLYAATKKANELMAHTYSSLYGLPTTGLRFF 181
Query: 299 TVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGALD-TAX 357
TVYGPWGRPDMA F FTK IL+G+ IDVY ++ RDFTY+DD+V+G +D T
Sbjct: 182 TVYGPWGRPDMALFLFTKAILEGRPIDVYNFG---KMQRDFTYVDDIVEGVTRVMDRTPE 238
Query: 358 XXXXXXXXXXXP----AQLRVYNLGNTSPVPVGRLVSILENLLNTKAKKHVIRMPRNGDV 413
P A R+YN+GN +PV + + +E L A+K+++ + + GDV
Sbjct: 239 PNPAWSGARPDPGTSYAPYRIYNIGNNNPVELLAFIEAIEQNLGITAQKNLLPL-QAGDV 297
Query: 414 PYTHANVSLAYKDFGYKPTTDLAAGLRKFVKWYVSYYGI 452
P T+A+V D G+KP T + G+ +FV+WY YYG+
Sbjct: 298 PATYADVDDLMNDVGFKPATPIGEGIERFVEWYRGYYGV 336
>TIGR_CMR|CBU_0844 [details] [associations]
symbol:CBU_0844 "capsular polysaccharide biosynthesis
protein I" species:227377 "Coxiella burnetii RSA 493" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] InterPro:IPR001509 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0044237 HOGENOM:HOG000168000
KO:K08679 OMA:NSAYSAN RefSeq:NP_819864.2 ProteinModelPortal:Q83D94
GeneID:1208737 KEGG:cbu:CBU_0844 PATRIC:17930385
ProtClustDB:CLSK914357 BioCyc:CBUR227377:GJ7S-839-MONOMER
GO:GO:0003974 Uniprot:Q83D94
Length = 339
Score = 773 (277.2 bits), Expect = 9.0e-77, P = 9.0e-77
Identities = 163/338 (48%), Positives = 219/338 (64%)
Query: 119 MTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEG- 177
M LVTG AGF+G H + L RGD +LGLDN N YYD +LK AR L++ F
Sbjct: 6 MRTLVTGCAGFIGFHLTKRLLARGDHILGLDNLNDYYDVNLKEARLAQLKEFPHFSFHKL 65
Query: 178 DLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQ 237
DL D +T LF F V+HLAAQAGVRY++ NP +YV SN+ GF ++LE C+ + +
Sbjct: 66 DLADRQGMTDLFQKHLFDTVVHLAAQAGVRYSLTNPYAYVDSNLVGFAHILEGCRHQSVK 125
Query: 238 PSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRF 297
+V+ASSSSVYG N + PFSES D P +LYAA+KKA E +AH+Y H++ L TGLRF
Sbjct: 126 -HLVFASSSSVYGANEKYPFSESDNVDHPIALYAASKKANELMAHSYAHLFQLPCTGLRF 184
Query: 298 FTVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGALD-TA 356
FTVYGPWGRPDMA F FT+++L K IDVY + +++RDFTYIDD+V G + LD
Sbjct: 185 FTVYGPWGRPDMALFKFTRNLLADKPIDVY---NHGKMSRDFTYIDDIVDGILLTLDHPP 241
Query: 357 XXXXXXXXXXXXPAQ----LRVYNLGNTSPVPVGRLVSILENLLNTKAKKHVIRMPRNGD 412
PA+ R+YN+G+ +P+ + ++ILE LN KA K+ + + + GD
Sbjct: 242 EPNSAYSANQPNPAKSNAPYRIYNIGSNNPILLTNFIAILEKTLNKKAIKNFLPL-QPGD 300
Query: 413 VPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKWYVSYY 450
VP T+A+VS KDF Y+P T L G++ FV+WY+ Y+
Sbjct: 301 VPETYADVSQLEKDFQYRPRTPLQKGVKNFVEWYLQYF 338
>UNIPROTKB|Q8E8H8 [details] [associations]
symbol:wcvA "UDP-glucuronate 4-epimerase WcvA"
species:211586 "Shewanella oneidensis MR-1" [GO:0009243 "O antigen
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE014299
GenomeReviews:AE014299_GR HOGENOM:HOG000168000 KO:K08679
GO:GO:0050378 OMA:NTAMPFS GO:GO:0009243 HSSP:P27830
RefSeq:NP_720202.1 ProteinModelPortal:Q8E8H8 GeneID:1172268
KEGG:son:SO_4686 PATRIC:23529037 ProtClustDB:CLSK907767
Uniprot:Q8E8H8
Length = 335
Score = 741 (265.9 bits), Expect = 2.2e-73, P = 2.2e-73
Identities = 162/338 (47%), Positives = 209/338 (61%)
Query: 119 MTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVF-IVEG 177
M LVTGAAGF+G++ S L G V+G+DN N YYD +LK AR L+ F ++
Sbjct: 1 MKYLVTGAAGFIGANVSKRLCAMGHEVVGIDNLNDYYDVALKLARLAPLEALSNFHFIKL 60
Query: 178 DLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQ 237
DL D + KLF F V+HLAAQAGVRY++ NP +Y SN+ G + +LE C+ +
Sbjct: 61 DLADREGIAKLFAQQGFQRVIHLAAQAGVRYSLDNPLAYADSNLVGHLTILEGCRHHKIE 120
Query: 238 PSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRF 297
+V+ASSSSVYGLN ++PFS D P SLYAATKKA E ++HTY+H+Y L TGLRF
Sbjct: 121 -HLVYASSSSVYGLNQKMPFSTEDSVDHPISLYAATKKANELMSHTYSHLYQLPTTGLRF 179
Query: 298 FTVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGALD--- 354
FTVYGPWGRPDMA F FTK IL G+TIDVY D ++RDFTYIDD+V+G + D
Sbjct: 180 FTVYGPWGRPDMALFKFTKAILAGETIDVYNHGD---LSRDFTYIDDIVEGIIRVQDKPP 236
Query: 355 --TAXXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAKKHVIRMPRNGD 412
T A RV+N+GN SPV + ++ LE L +AKK + M + GD
Sbjct: 237 SPTPDWRVETGTPANSSAPYRVFNIGNGSPVQLLDFITALERALGIEAKKQFLPM-QPGD 295
Query: 413 VPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKWYVSYY 450
V T A+ +K GYK D+ G+ KFV WY ++Y
Sbjct: 296 VHATWADTEDLFKAVGYKSQVDIDTGVAKFVDWYRNFY 333
>TIGR_CMR|SO_4686 [details] [associations]
symbol:SO_4686 "NAD dependent epimerase/dehydratase family
protein" species:211586 "Shewanella oneidensis MR-1" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=ISS] [GO:0009243 "O antigen
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE014299
GenomeReviews:AE014299_GR HOGENOM:HOG000168000 KO:K08679
GO:GO:0050378 OMA:NTAMPFS GO:GO:0009243 HSSP:P27830
RefSeq:NP_720202.1 ProteinModelPortal:Q8E8H8 GeneID:1172268
KEGG:son:SO_4686 PATRIC:23529037 ProtClustDB:CLSK907767
Uniprot:Q8E8H8
Length = 335
Score = 741 (265.9 bits), Expect = 2.2e-73, P = 2.2e-73
Identities = 162/338 (47%), Positives = 209/338 (61%)
Query: 119 MTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVF-IVEG 177
M LVTGAAGF+G++ S L G V+G+DN N YYD +LK AR L+ F ++
Sbjct: 1 MKYLVTGAAGFIGANVSKRLCAMGHEVVGIDNLNDYYDVALKLARLAPLEALSNFHFIKL 60
Query: 178 DLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQ 237
DL D + KLF F V+HLAAQAGVRY++ NP +Y SN+ G + +LE C+ +
Sbjct: 61 DLADREGIAKLFAQQGFQRVIHLAAQAGVRYSLDNPLAYADSNLVGHLTILEGCRHHKIE 120
Query: 238 PSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRF 297
+V+ASSSSVYGLN ++PFS D P SLYAATKKA E ++HTY+H+Y L TGLRF
Sbjct: 121 -HLVYASSSSVYGLNQKMPFSTEDSVDHPISLYAATKKANELMSHTYSHLYQLPTTGLRF 179
Query: 298 FTVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGALD--- 354
FTVYGPWGRPDMA F FTK IL G+TIDVY D ++RDFTYIDD+V+G + D
Sbjct: 180 FTVYGPWGRPDMALFKFTKAILAGETIDVYNHGD---LSRDFTYIDDIVEGIIRVQDKPP 236
Query: 355 --TAXXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAKKHVIRMPRNGD 412
T A RV+N+GN SPV + ++ LE L +AKK + M + GD
Sbjct: 237 SPTPDWRVETGTPANSSAPYRVFNIGNGSPVQLLDFITALERALGIEAKKQFLPM-QPGD 295
Query: 413 VPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKWYVSYY 450
V T A+ +K GYK D+ G+ KFV WY ++Y
Sbjct: 296 VHATWADTEDLFKAVGYKSQVDIDTGVAKFVDWYRNFY 333
>UNIPROTKB|Q489C2 [details] [associations]
symbol:CPS_0592 "Capsular polysaccharide biosynthesis
protein" species:167879 "Colwellia psychrerythraea 34H" [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] [GO:0045227 "capsule polysaccharide
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0045227 GO:GO:0016857
HOGENOM:HOG000168000 KO:K08679 OMA:NTAMPFS RefSeq:YP_267342.1
ProteinModelPortal:Q489C2 STRING:Q489C2 GeneID:3519977
KEGG:cps:CPS_0592 PATRIC:21464513 ProtClustDB:CLSK2396596
BioCyc:CPSY167879:GI48-679-MONOMER Uniprot:Q489C2
Length = 334
Score = 694 (249.4 bits), Expect = 2.1e-68, P = 2.1e-68
Identities = 146/339 (43%), Positives = 204/339 (60%)
Query: 119 MTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGD 178
M LVTGAAGF+GS L G V+G+DN N YYD +LK+AR ++ ++ D
Sbjct: 1 MKYLVTGAAGFIGSAVVERLCAAGHDVVGIDNINDYYDIALKQARLARIEHASFSFIKMD 60
Query: 179 LNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQP 238
+ D ++ +LF F V+HLAAQAGVRY+++NP +Y SN+ G +N+LE C++ N
Sbjct: 61 IADRNVMAELFTAQQFDKVVHLAAQAGVRYSIENPMAYADSNLIGHLNVLEGCRN-NQVK 119
Query: 239 SIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRFF 298
+++ASSSSVYGLN +VPFS D P SLYAATKK+ E +AH+Y+H+Y + TGLRFF
Sbjct: 120 HLIYASSSSVYGLNNKVPFSTKDTVDHPVSLYAATKKSNELMAHSYSHLYNIPTTGLRFF 179
Query: 299 TVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGALDT--- 355
TVYG WGRPDMA + FTK IL G TID+ D + RDFT++DD+V+G + D
Sbjct: 180 TVYGSWGRPDMAPYIFTKKILNGDTIDINNNGD---MWRDFTHVDDIVEGVIRIADVIPE 236
Query: 356 --AXXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAKKHVIRMPRNGDV 413
A A VYN+G+ SP+ + V +E+ L +AKK+ M + GDV
Sbjct: 237 RDAEWKVESGSPATSSAPYSVYNIGHGSPISLMDFVKAIEDELGIEAKKNFREM-QPGDV 295
Query: 414 PYTHANVSLAYKDFGYKPTTDLAAGLRKFVKWYVSYYGI 452
T+A+ +K Y P + G+ + V W+ +Y I
Sbjct: 296 YQTYADTQDLFKATNYVPKISVKEGVAELVVWFKDFYKI 334
>TIGR_CMR|CPS_0592 [details] [associations]
symbol:CPS_0592 "capsular polysaccharide biosynthesis
protein" species:167879 "Colwellia psychrerythraea 34H" [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] [GO:0045227 "capsule polysaccharide
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0045227 GO:GO:0016857
HOGENOM:HOG000168000 KO:K08679 OMA:NTAMPFS RefSeq:YP_267342.1
ProteinModelPortal:Q489C2 STRING:Q489C2 GeneID:3519977
KEGG:cps:CPS_0592 PATRIC:21464513 ProtClustDB:CLSK2396596
BioCyc:CPSY167879:GI48-679-MONOMER Uniprot:Q489C2
Length = 334
Score = 694 (249.4 bits), Expect = 2.1e-68, P = 2.1e-68
Identities = 146/339 (43%), Positives = 204/339 (60%)
Query: 119 MTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGD 178
M LVTGAAGF+GS L G V+G+DN N YYD +LK+AR ++ ++ D
Sbjct: 1 MKYLVTGAAGFIGSAVVERLCAAGHDVVGIDNINDYYDIALKQARLARIEHASFSFIKMD 60
Query: 179 LNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQP 238
+ D ++ +LF F V+HLAAQAGVRY+++NP +Y SN+ G +N+LE C++ N
Sbjct: 61 IADRNVMAELFTAQQFDKVVHLAAQAGVRYSIENPMAYADSNLIGHLNVLEGCRN-NQVK 119
Query: 239 SIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRFF 298
+++ASSSSVYGLN +VPFS D P SLYAATKK+ E +AH+Y+H+Y + TGLRFF
Sbjct: 120 HLIYASSSSVYGLNNKVPFSTKDTVDHPVSLYAATKKSNELMAHSYSHLYNIPTTGLRFF 179
Query: 299 TVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGALDT--- 355
TVYG WGRPDMA + FTK IL G TID+ D + RDFT++DD+V+G + D
Sbjct: 180 TVYGSWGRPDMAPYIFTKKILNGDTIDINNNGD---MWRDFTHVDDIVEGVIRIADVIPE 236
Query: 356 --AXXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAKKHVIRMPRNGDV 413
A A VYN+G+ SP+ + V +E+ L +AKK+ M + GDV
Sbjct: 237 RDAEWKVESGSPATSSAPYSVYNIGHGSPISLMDFVKAIEDELGIEAKKNFREM-QPGDV 295
Query: 414 PYTHANVSLAYKDFGYKPTTDLAAGLRKFVKWYVSYYGI 452
T+A+ +K Y P + G+ + V W+ +Y I
Sbjct: 296 YQTYADTQDLFKATNYVPKISVKEGVAELVVWFKDFYKI 334
>UNIPROTKB|Q0BYW6 [details] [associations]
symbol:HNE_2639 "UDP-glucuronate 5'-epimerase"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0050379
"UDP-glucuronate 5'-epimerase activity" evidence=ISS]
InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009103 EMBL:CP000158 GenomeReviews:CP000158_GR
HOGENOM:HOG000168000 KO:K08679 GO:GO:0050379 RefSeq:YP_761327.1
ProteinModelPortal:Q0BYW6 STRING:Q0BYW6 GeneID:4289771
KEGG:hne:HNE_2639 PATRIC:32218139 OMA:NSAYSAN
BioCyc:HNEP228405:GI69-2655-MONOMER Uniprot:Q0BYW6
Length = 334
Score = 647 (232.8 bits), Expect = 2.0e-63, P = 2.0e-63
Identities = 142/336 (42%), Positives = 195/336 (58%)
Query: 119 MTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEG- 177
M +LVTGAAGF+GS +L L K G V G+D F YYDP LK R L F +E
Sbjct: 1 MKILVTGAAGFIGSEMALRLLKEGHSVTGVDCFTPYYDPQLKEDRAARLTAFDDFRLERI 60
Query: 178 DLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQ 237
+ D+ + +F VLH AAQAGVRY++ +P+ ++ +NI G N++++ + Q
Sbjct: 61 RIEDSEAMEAVFQRDTPEMVLHFAAQAGVRYSLDHPRDFIDANIVGSFNIIDLSRRHGTQ 120
Query: 238 PSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRF 297
+V AS+SS YG N + PF E P ++YAATK A E IAH++ H+YG+ T LRF
Sbjct: 121 -HLVMASTSSAYGANQKFPFEERDSAPYPLTIYAATKLASELIAHSHAHLYGVPTTVLRF 179
Query: 298 FTVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGALDT-- 355
F+VYGPWGRPDMA+F FT I +G+ IDV+ D + RDFTYIDD+V+ +DT
Sbjct: 180 FSVYGPWGRPDMAFFLFTDKIFKGQPIDVFNHGD---LLRDFTYIDDLVEAIRRLMDTPP 236
Query: 356 AXXXXXXXXXXXXP-AQLRVYNLGNTSPVPVGRLVSILENLLNTKAKKHVIRMPRNGDVP 414
P A R+ N+GN SPV + + +E + KA+K++I M + GDV
Sbjct: 237 VVGNHIIRGDSLSPVAPYRLVNIGNASPVRLMDYIEAIEGAIGRKAEKNMIDM-QPGDVK 295
Query: 415 YTHANVSLAYKDFGYKPTTDLAAGLRKFVKWYVSYY 450
T A+V L GY P TD G+ +FV WY Y+
Sbjct: 296 QTFADVRLLDALTGYTPDTDYRTGIARFVDWYRDYF 331
>UNIPROTKB|Q8ECF3 [details] [associations]
symbol:wbpP "UDP-GlkcNAc C4 epimerase WbpP" species:211586
"Shewanella oneidensis MR-1" [GO:0000271 "polysaccharide
biosynthetic process" evidence=ISS] [GO:0003824 "catalytic
activity" evidence=ISS] InterPro:IPR001509 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0044237 GO:GO:0000271
HOGENOM:HOG000167994 HSSP:P32054 KO:K02473 GO:GO:0003974
RefSeq:NP_718745.1 ProteinModelPortal:Q8ECF3 SMR:Q8ECF3
GeneID:1170882 KEGG:son:SO_3189 PATRIC:23526060 OMA:NEVYNVA
ProtClustDB:CLSK2304490 Uniprot:Q8ECF3
Length = 340
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 108/342 (31%), Positives = 165/342 (48%)
Query: 120 TVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVF---IVE 176
T L+TG AGF+GS+ L K V+GLDNF + +L Q L+ Q +
Sbjct: 17 TWLITGVAGFIGSNLLEQLLKLNQTVIGLDNFATGRQHNLDEV-QSLVTSEQWMRFSFIN 75
Query: 177 GDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNP 236
GD+ D + + + V + VLH AA V ++ +P + A+NI GF+N+L+ K
Sbjct: 76 GDIRDYAICEAVVNGVDY--VLHQAALGSVPRSIADPITTNAANITGFLNMLQAAKEAEV 133
Query: 237 QPSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLR 296
+ S +A+SSS YG + +P E + P S YA TK E A Y YG GLR
Sbjct: 134 K-SFTYAASSSTYGDHPALPKVEQN-IGNPLSPYAVTKYVNELYASVYARTYGFETIGLR 191
Query: 297 FFTVYGPWGRPDMAYFF----FTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGA 352
+F V+G P+ AY +T +++G+ DV+ D E +RDF YID+VV+ + A
Sbjct: 192 YFNVFGRRQDPNGAYAAVIPKWTSSMIKGE--DVF-INGDGETSRDFCYIDNVVQMNILA 248
Query: 353 LDTAXXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAKKHVIRMP---- 408
A A+ VYN+ + L +++ LN +V + P
Sbjct: 249 ATAASE-----------AKNEVYNVAVGDRTTLNDLYFAIKDSLNANGI-NVNQNPNYRD 296
Query: 409 -RNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKWYVSY 449
R GDV ++ A+VS A GY+ T + G+ + + WY +
Sbjct: 297 FRAGDVRHSQADVSKAVTRLGYQYTHKILEGISEAMPWYKEF 338
>TIGR_CMR|SO_3189 [details] [associations]
symbol:SO_3189 "polysaccharide biosynthesis protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0044237 GO:GO:0000271
HOGENOM:HOG000167994 HSSP:P32054 KO:K02473 GO:GO:0003974
RefSeq:NP_718745.1 ProteinModelPortal:Q8ECF3 SMR:Q8ECF3
GeneID:1170882 KEGG:son:SO_3189 PATRIC:23526060 OMA:NEVYNVA
ProtClustDB:CLSK2304490 Uniprot:Q8ECF3
Length = 340
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 108/342 (31%), Positives = 165/342 (48%)
Query: 120 TVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVF---IVE 176
T L+TG AGF+GS+ L K V+GLDNF + +L Q L+ Q +
Sbjct: 17 TWLITGVAGFIGSNLLEQLLKLNQTVIGLDNFATGRQHNLDEV-QSLVTSEQWMRFSFIN 75
Query: 177 GDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNP 236
GD+ D + + + V + VLH AA V ++ +P + A+NI GF+N+L+ K
Sbjct: 76 GDIRDYAICEAVVNGVDY--VLHQAALGSVPRSIADPITTNAANITGFLNMLQAAKEAEV 133
Query: 237 QPSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLR 296
+ S +A+SSS YG + +P E + P S YA TK E A Y YG GLR
Sbjct: 134 K-SFTYAASSSTYGDHPALPKVEQN-IGNPLSPYAVTKYVNELYASVYARTYGFETIGLR 191
Query: 297 FFTVYGPWGRPDMAYFF----FTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGA 352
+F V+G P+ AY +T +++G+ DV+ D E +RDF YID+VV+ + A
Sbjct: 192 YFNVFGRRQDPNGAYAAVIPKWTSSMIKGE--DVF-INGDGETSRDFCYIDNVVQMNILA 248
Query: 353 LDTAXXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAKKHVIRMP---- 408
A A+ VYN+ + L +++ LN +V + P
Sbjct: 249 ATAASE-----------AKNEVYNVAVGDRTTLNDLYFAIKDSLNANGI-NVNQNPNYRD 296
Query: 409 -RNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKWYVSY 449
R GDV ++ A+VS A GY+ T + G+ + + WY +
Sbjct: 297 FRAGDVRHSQADVSKAVTRLGYQYTHKILEGISEAMPWYKEF 338
>UNIPROTKB|Q6MWV3 [details] [associations]
symbol:galE1 "UDP-glucose 4-epimerase" species:1773
"Mycobacterium tuberculosis" [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0040007 "growth" evidence=IMP] InterPro:IPR001509
Pfam:PF01370 UniPathway:UPA00214 InterPro:IPR016040 GO:GO:0005886
GO:GO:0040007 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:BX842583 GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 KO:K01784 PIR:C70562 RefSeq:NP_215015.2
RefSeq:NP_338283.1 RefSeq:YP_006517123.1 HSSP:P09147
ProteinModelPortal:Q6MWV3 SMR:Q6MWV3 PRIDE:Q6MWV3
EnsemblBacteria:EBMYCT00000000637 EnsemblBacteria:EBMYCT00000072644
GeneID:13317242 GeneID:885765 GeneID:926502 KEGG:mtu:Rv3634c
KEGG:mtv:RVBD_3634c PATRIC:18129967 PATRIC:18156681
TubercuList:Rv3634c HOGENOM:HOG000167994 OMA:HSVADPQ
ProtClustDB:CLSK881159 BioCyc:MetaCyc:MONOMER-15254 Uniprot:Q6MWV3
Length = 314
Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 106/331 (32%), Positives = 152/331 (45%)
Query: 119 MTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGD 178
M LVTGAAGF+GS L G V+GLDNF + +L+ H VF VE D
Sbjct: 1 MRALVTGAAGFIGSTLVDRLLADGHSVVGLDNFATGRATNLEHLADN--SAH-VF-VEAD 56
Query: 179 LNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQP 238
+ A L L P V HLAAQ VR ++ +PQ A N+ G V L E + +
Sbjct: 57 IVTADLHAILEQHRPEV-VFHLAAQIDVRRSVADPQFDAAVNVIGTVRLAEAARQTGVRK 115
Query: 239 SIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRFF 298
+ +S S+YG + P E+ TD PAS YAA K AGE +T+ H+YGL + +
Sbjct: 116 IVHTSSGGSIYGTPPEYPTPETAPTD-PASPYAAGKVAGEIYLNTFRHLYGLDCSHIAPA 174
Query: 299 TVYGPWGRPDM---AYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGALDT 355
VYGP P F + +L GK V+ D RD+ ++DDVV V
Sbjct: 175 NVYGPRQDPHGEAGVVAIFAQALLSGKPTRVF---GDGTNTRDYVFVDDVVDAFVRV--- 228
Query: 356 AXXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAKKHVIRMPRNGDVPY 415
LR +N+G +L S + + PR GD+
Sbjct: 229 ---------SADVGGGLR-FNIGTGKETSDRQLHSAVAAAVGGPDDPE-FHPPRLGDLKR 277
Query: 416 THANVSLAYKDFGYKPTTDLAAGLRKFVKWY 446
+ ++ LA + G++P +LA G+R+ V+++
Sbjct: 278 SCLDIGLAERVLGWRPQIELADGVRRTVEYF 308
>UNIPROTKB|Q47Y09 [details] [associations]
symbol:CPS_3643 "NAD-dependent epimerase/dehydratase
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0044237
GO:GO:0000271 GO:GO:0016857 HOGENOM:HOG000167994 RefSeq:YP_270311.1
ProteinModelPortal:Q47Y09 SMR:Q47Y09 STRING:Q47Y09 GeneID:3519571
KEGG:cps:CPS_3643 PATRIC:21470213 KO:K02473 OMA:MIANEEL
BioCyc:CPSY167879:GI48-3665-MONOMER Uniprot:Q47Y09
Length = 344
Score = 290 (107.1 bits), Expect = 1.9e-25, P = 1.9e-25
Identities = 96/339 (28%), Positives = 155/339 (45%)
Query: 120 TVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLL--QKHQVFIVEG 177
T L+TG AGF+GS+ L V+GLDNF + + + + ++ Q + V+G
Sbjct: 17 TWLITGCAGFIGSNLLETLLLLNQKVVGLDNFATGHQHNFDEVQTQVSAEQWQNFYFVKG 76
Query: 178 DLNDAP-LLTKLFDVVP-FTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVN 235
D+ T L ++LH AA V ++ +P ++NI GF+ +L K
Sbjct: 77 DIRQLEDCQTALSHYKSGVDYILHQAALGSVPRSIADPLLTNSANITGFLTMLTAAKETQ 136
Query: 236 PQPSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGL 295
+ S V+A+SSS YG + +P E +P S YA TK E A ++ YGL TGL
Sbjct: 137 VK-SFVYAASSSTYGDHPALPKVED-AIGKPLSPYAVTKYVNELYADVFHKTYGLNCTGL 194
Query: 296 RFFTVYGPWGRPDMAYF-FFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGALD 354
R+F V+G PD AY K + + D E +RDF ++++ V+ + A
Sbjct: 195 RYFNVFGKRQDPDGAYAAVIPKWTVAMIANEELLINGDGETSRDFCFVENAVQANILAA- 253
Query: 355 TAXXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILENLLNTKA----KKHVIRMPRN 410
TA + +VYN+ + L + L+ L K + R
Sbjct: 254 TANDA----------GKNQVYNVALGDRTSLNTLFNSLKVALQANGVDYQKSPTYQDFRA 303
Query: 411 GDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKWYVSY 449
GDV ++ A++S A G++P + G+ K + WY+ +
Sbjct: 304 GDVRHSQADISKAKSLIGFEPEFKIQQGIDKAMPWYIKF 342
>TIGR_CMR|CPS_3643 [details] [associations]
symbol:CPS_3643 "NAD-dependent epimerase/dehydratase
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0044237
GO:GO:0000271 GO:GO:0016857 HOGENOM:HOG000167994 RefSeq:YP_270311.1
ProteinModelPortal:Q47Y09 SMR:Q47Y09 STRING:Q47Y09 GeneID:3519571
KEGG:cps:CPS_3643 PATRIC:21470213 KO:K02473 OMA:MIANEEL
BioCyc:CPSY167879:GI48-3665-MONOMER Uniprot:Q47Y09
Length = 344
Score = 290 (107.1 bits), Expect = 1.9e-25, P = 1.9e-25
Identities = 96/339 (28%), Positives = 155/339 (45%)
Query: 120 TVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLL--QKHQVFIVEG 177
T L+TG AGF+GS+ L V+GLDNF + + + + ++ Q + V+G
Sbjct: 17 TWLITGCAGFIGSNLLETLLLLNQKVVGLDNFATGHQHNFDEVQTQVSAEQWQNFYFVKG 76
Query: 178 DLNDAP-LLTKLFDVVP-FTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVN 235
D+ T L ++LH AA V ++ +P ++NI GF+ +L K
Sbjct: 77 DIRQLEDCQTALSHYKSGVDYILHQAALGSVPRSIADPLLTNSANITGFLTMLTAAKETQ 136
Query: 236 PQPSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGL 295
+ S V+A+SSS YG + +P E +P S YA TK E A ++ YGL TGL
Sbjct: 137 VK-SFVYAASSSTYGDHPALPKVED-AIGKPLSPYAVTKYVNELYADVFHKTYGLNCTGL 194
Query: 296 RFFTVYGPWGRPDMAYF-FFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGALD 354
R+F V+G PD AY K + + D E +RDF ++++ V+ + A
Sbjct: 195 RYFNVFGKRQDPDGAYAAVIPKWTVAMIANEELLINGDGETSRDFCFVENAVQANILAA- 253
Query: 355 TAXXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILENLLNTKA----KKHVIRMPRN 410
TA + +VYN+ + L + L+ L K + R
Sbjct: 254 TANDA----------GKNQVYNVALGDRTSLNTLFNSLKVALQANGVDYQKSPTYQDFRA 303
Query: 411 GDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKWYVSY 449
GDV ++ A++S A G++P + G+ K + WY+ +
Sbjct: 304 GDVRHSQADISKAKSLIGFEPEFKIQQGIDKAMPWYIKF 342
>ZFIN|ZDB-GENE-060421-6479 [details] [associations]
symbol:gale "UDP-galactose-4-epimerase"
species:7955 "Danio rerio" [GO:0016857 "racemase and epimerase
activity, acting on carbohydrates and derivatives" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0005975
"carbohydrate metabolic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0006012 "galactose metabolic process"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016853 "isomerase activity" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 ZFIN:ZDB-GENE-060421-6479 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 GeneTree:ENSGT00530000063128
EMBL:CR391986 IPI:IPI00758807 Ensembl:ENSDART00000135569
ArrayExpress:F1Q5H4 Bgee:F1Q5H4 Uniprot:F1Q5H4
Length = 350
Score = 279 (103.3 bits), Expect = 3.7e-24, P = 3.7e-24
Identities = 102/348 (29%), Positives = 161/348 (46%)
Query: 121 VLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYY----D-PSLKRARQKLLQKHQVFIV 175
+LVTG G++GSHC + L + G + +DNF++ D P R +K + Q+
Sbjct: 5 ILVTGGGGYIGSHCVVELIEAGFHPVVIDNFSNAVRGEGDVPESLRRIEKFMDT-QIEFH 63
Query: 176 EGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVN 235
E DL D P L K+F + F V+H A V +++ P Y N+ G +NLLEV +S
Sbjct: 64 ELDLLDKPGLEKIFKMHSFYAVMHFAGLKAVGESVEQPLRYYRVNLTGTINLLEVMQSHG 123
Query: 236 PQPSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAH---TYNHIYGLAL 292
+ ++V++SS++VYG ++P E H + Y TK EE+ T + L
Sbjct: 124 VR-NLVFSSSATVYGDPQKLPIDEQHPVGGCTNPYGKTKYFIEEMIRDQCTAEKDWNAVL 182
Query: 293 TGLRFFTVYG----------PWGRPDMAYFFFTKDIL-QGKTIDV----YKTQDDREVAR 337
LR+F G P G P+ + + + + K ++V Y T D V R
Sbjct: 183 --LRYFNPIGAHISGQIGEDPQGIPNNLLPYVAQVAIGRRKHLNVFGNDYSTPDGTGV-R 239
Query: 338 DFTYIDDVVKGCVGALDTAXXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILENLLN 397
D+ ++ D+ KG + A+ +VYNLG + V ++VS +E
Sbjct: 240 DYIHVVDLAKGHIAAVRKLKDS----------CGCKVYNLGTGTGYSVLQMVSAMEKASG 289
Query: 398 TKAKKHVIRMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKW 445
K + I R+GDV +A+ SLA K+ G+K DL +W
Sbjct: 290 RKIA-YQIAPRRSGDVASCYADASLAEKELGWKAEFDLERMCEDLWRW 336
>TIGR_CMR|CBU_0677 [details] [associations]
symbol:CBU_0677 "NAD dependent epimerase/dehydratase
family protein" species:227377 "Coxiella burnetii RSA 493"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009243 "O
antigen biosynthetic process" evidence=ISS] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 HSSP:P09147
EMBL:AF387640 ProteinModelPortal:Q93N66 Uniprot:Q93N66
Length = 344
Score = 242 (90.2 bits), Expect = 3.4e-23, Sum P(2) = 3.4e-23
Identities = 82/273 (30%), Positives = 124/273 (45%)
Query: 122 LVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLK-RARQKLLQKHQVFIVEGDLN 180
+VTG AGF+GSH L G V +DN + +L+ RA L F ++ D+
Sbjct: 7 IVTGGAGFIGSHMVDLLLDCGFQVRVIDNLKGGHRRNLEHRANNPDL----TFEIK-DIC 61
Query: 181 DAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQPSI 240
+ LF+ V + V H A + +++NP Y+ +N+ G V +LE ++ N + +
Sbjct: 62 ELSAPHPLFENVDY--VFHFAGIGDIVPSIENPIDYLQTNVMGTVRVLECARAANVK-KL 118
Query: 241 VWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRFFTV 300
V+A+SSS YGL VP E H P YA +K GEE A + +YGL + +R F
Sbjct: 119 VYAASSSCYGL-ADVPTREDHPI-APQYPYALSKYLGEEAAFHWFQVYGLPVNSIRIFNA 176
Query: 301 YGPWGRPDMAYFFFTKDILQGKTIDV-YKTQDDREVARDFTYIDDVVKGCVGALDTAXXX 359
YG R Y + K D + D RDF Y+ DV + + A +T
Sbjct: 177 YGTRVRTTGVYGAVFGVFFKQKLADKPFTVVGDGTQRRDFLYVTDVARAFLKAAETRKVG 236
Query: 360 XXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSIL 392
+NLG +P + RLV ++
Sbjct: 237 -------------ETWNLGAGNPQSINRLVELI 256
Score = 72 (30.4 bits), Expect = 3.4e-23, Sum P(2) = 3.4e-23
Identities = 23/94 (24%), Positives = 47/94 (50%)
Query: 375 YNLGNTSPVPVGRLVSILENLLNTKAKKHVIRMPRNGDVPYTHANVSLAYKDFGYKPTTD 434
+NLG +P + RLV ++ + +++ + P G+ T A++S +D G++PT
Sbjct: 239 WNLGAGNPQSINRLVELIGGEV-----EYIPKRP--GEPDCTWADISKIKRDLGWEPTIT 291
Query: 435 LAAGLRKFVKWYVSYYGIQPRVKKENGFSTTTST 468
A G+ + + + + P KE+ + T+T
Sbjct: 292 FADGVSRMMS-EIGVWHDAPLWNKES-IANATAT 323
>WB|WBGene00008132 [details] [associations]
symbol:gale-1 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0016616 "oxidoreductase activity, acting on the
CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0009058
"biosynthetic process" evidence=IEA] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=IEA] [GO:0006012 "galactose
metabolic process" evidence=IEA] [GO:0008831
"dTDP-4-dehydrorhamnose reductase activity" evidence=IEA]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=IEA] [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] [GO:0016857 "racemase and epimerase activity, acting
on carbohydrates and derivatives" evidence=IEA] [GO:0042335
"cuticle development" evidence=IGI;IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0042335 GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
GeneTree:ENSGT00530000063128 OMA:THAPIDA EMBL:Z99709 GeneID:173171
KEGG:cel:CELE_C47B2.6 UCSC:C47B2.6b CTD:173171 NextBio:878565
RefSeq:NP_001021052.1 ProteinModelPortal:Q564Q1 SMR:Q564Q1
STRING:Q564Q1 PRIDE:Q564Q1 EnsemblMetazoa:C47B2.6b
WormBase:C47B2.6b InParanoid:Q564Q1 ArrayExpress:Q564Q1
Uniprot:Q564Q1
Length = 349
Score = 269 (99.8 bits), Expect = 5.2e-23, P = 5.2e-23
Identities = 107/345 (31%), Positives = 160/345 (46%)
Query: 119 MTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNF-N--SYYDP-----SLKRARQKLLQKH 170
M +LVTGAAGF+GSH L L G VL +DNF N S D SLKR Q L
Sbjct: 1 MHILVTGAAGFIGSHTVLELLNSGYTVLCIDNFANAISVTDEHGNAISLKRVAQ--LTGK 58
Query: 171 QVFIVEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEV 230
V D+ D L K+F F ++HLAA V ++ P Y ++N+ +NL+++
Sbjct: 59 DVPFQNVDVCDEAALEKVFSENKFDGIIHLAALKAVGESVAKPLQYYSNNLVASLNLIQM 118
Query: 231 CKSVNPQPSIVWASSSSVYGLNTQVPFSESHRTDQP-ASLYAATKKAGEEI---AHTYNH 286
C N + + V++SS++VYG +++P +E +T Q + Y TK E+I N
Sbjct: 119 CLKYNVK-NFVFSSSATVYGPPSELPITEKSQTGQGITNPYGQTKYMMEQILIDVGKANP 177
Query: 287 IYGLALTGLRFFTVYG----------PWGRPDMAYFFFTKDILQGK----TI--DVYKTQ 330
+ + L LR+F G P G P+ + ++ + GK TI D + T
Sbjct: 178 EWNVVL--LRYFNPVGAHKSGLIGEDPKGVPNNLMPYVSQ-VAIGKLPVLTIYGDQFDTV 234
Query: 331 DDREVARDFTYIDDVVKGCVGALDTAXXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVS 390
D V RD+ ++ D+ KG V A D +YNLG V ++V
Sbjct: 235 DGTGV-RDYIHVVDLAKGHVKAFDRIKTVGNIGT--------EIYNLGTGVGYSVRQMVD 285
Query: 391 ILENLLNTKAKKHVIRMPRNGDVPYTHANVSLAYKDFGYKPTTDL 435
L+ + I +PR GDV + + SLA + G++ T L
Sbjct: 286 ALKKVSGRDIPVK-IGVPRPGDVASVYCDPSLAQEKLGWRAETGL 329
>UNIPROTKB|I3LL84 [details] [associations]
symbol:GALE "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019388 "galactose catabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
GO:GO:0019388 KO:K01784 GeneTree:ENSGT00530000063128 OMA:ADKAWNA
CTD:2582 EMBL:FP475977 RefSeq:XP_003356250.1
Ensembl:ENSSSCT00000028713 GeneID:100621392 KEGG:ssc:100621392
Uniprot:I3LL84
Length = 348
Score = 266 (98.7 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 99/349 (28%), Positives = 157/349 (44%)
Query: 121 VLVTGAAGFVGSHCSLALKKRGDGVLGLDNFN------SYYDPSLKRARQKLLQKHQVFI 174
VLVTG AG++GSH L L + G + +DNF+ S SL+R ++ L V
Sbjct: 5 VLVTGGAGYIGSHTVLELLEAGYSPVVIDNFHNAIRGGSSMPESLRRVQE--LTGRSVEF 62
Query: 175 VEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSV 234
E D+ D L +LF F V+H A V ++Q P Y N+ G + LLE+ K+
Sbjct: 63 EEMDILDQAALQRLFKKYHFVAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH 122
Query: 235 NPQPSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTY---NHIYGLA 291
+ ++V++SS++VYG +P E+H T + Y +K EE+ + +
Sbjct: 123 GVK-NLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKAWNAV 181
Query: 292 LTGLRFFTVYG----------PWGRPDMAYFFFTKDIL-QGKTIDV----YKTQDDREVA 336
L LR+F G P G P+ + ++ + + + ++V Y T+D V
Sbjct: 182 L--LRYFNPIGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGV- 238
Query: 337 RDFTYIDDVVKGCVGALDTAXXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILENLL 396
RD+ ++ D+ KG + AL R+YNLG + V ++V +E
Sbjct: 239 RDYIHVVDLAKGHIAAL----------RKLKEQCGCRIYNLGTGTGYSVLQMVRAMEKAS 288
Query: 397 NTKAKKHVIRMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKW 445
K V+ R GDV +AN SLA K+ G+ L +W
Sbjct: 289 GKKIPYKVVAR-REGDVAACYANPSLALKELGWTAALGLDRMCEDLWRW 336
>UNIPROTKB|F1PI88 [details] [associations]
symbol:GALE "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019388 "galactose catabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
GO:GO:0019388 KO:K01784 GeneTree:ENSGT00530000063128 OMA:ADKAWNA
EMBL:AAEX03001747 RefSeq:XP_003638951.1 ProteinModelPortal:F1PI88
Ensembl:ENSCAFT00000020920 GeneID:100855555 KEGG:cfa:100855555
Uniprot:F1PI88
Length = 348
Score = 262 (97.3 bits), Expect = 3.2e-22, P = 3.2e-22
Identities = 95/347 (27%), Positives = 159/347 (45%)
Query: 121 VLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYY--DPSLKRARQKL--LQKHQVFIVE 176
VLVTG AG++GSH L L + G + +DNF++ S+ + Q++ L V E
Sbjct: 5 VLVTGGAGYIGSHTVLELLEAGYSPVVIDNFHNAIRGKGSMPESLQRVQELTGRSVEFEE 64
Query: 177 GDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNP 236
D+ D L +LF+ FT V+H A V ++Q P Y N+ G + LLE+ ++
Sbjct: 65 MDILDQAALQRLFEKHSFTAVIHFAGLKAVGESVQKPLDYYRVNLTGSIQLLEIMRAHGV 124
Query: 237 QPSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTY---NHIYGLALT 293
+ ++V++SS++VYG +P E+H T + Y +K EE+ + + L
Sbjct: 125 K-NLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKYFIEEMIRDLCQADKAWNAVL- 182
Query: 294 GLRFFTVYG----------PWGRPDMAYFFFTKDIL-QGKTIDV----YKTQDDREVARD 338
LR+F G P G P+ + ++ + + + ++V Y T+D V RD
Sbjct: 183 -LRYFNPIGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREVLNVFGNDYDTEDGTGV-RD 240
Query: 339 FTYIDDVVKGCVGALDTAXXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILENLLNT 398
+ ++ D+ KG + AL R+YNLG + V ++V ++
Sbjct: 241 YIHVVDLAKGHIAAL----------RKLKEQCGCRIYNLGTGTGYSVLQMVEAMKKASGQ 290
Query: 399 KAKKHVIRMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKW 445
+ V+ R GDV +AN SLA K+ G+ L +W
Sbjct: 291 EIPYKVVAR-REGDVAACYANPSLALKELGWTAVLGLDRMCEDLWRW 336
>UNIPROTKB|Q3T105 [details] [associations]
symbol:GALE "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019388 "galactose catabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 GO:GO:0019388 KO:K01784
GeneTree:ENSGT00530000063128 OMA:ADKAWNA CTD:2582
HOVERGEN:HBG001396 OrthoDB:EOG4B5P5D EMBL:DAAA02006426
EMBL:BC102185 IPI:IPI00686007 RefSeq:NP_001193137.1
UniGene:Bt.12474 SMR:Q3T105 STRING:Q3T105
Ensembl:ENSBTAT00000006586 GeneID:523154 KEGG:bta:523154
InParanoid:Q3T105 NextBio:20873677 Uniprot:Q3T105
Length = 348
Score = 259 (96.2 bits), Expect = 7.0e-22, P = 7.0e-22
Identities = 98/349 (28%), Positives = 157/349 (44%)
Query: 121 VLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYD-----P-SLKRARQKLLQKHQVFI 174
VLVTG AG++GSH L L + G + +DNF++ P SL+R + L V
Sbjct: 5 VLVTGGAGYIGSHTVLELLEAGYSPMVIDNFHNAIRGGGSMPESLRRVQD--LTGRSVEF 62
Query: 175 VEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSV 234
E D+ D L +LF F V+H A V ++Q P Y N+ G + LLE+ ++
Sbjct: 63 EEMDILDQAALQRLFKKHSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMRAH 122
Query: 235 NPQPSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTY---NHIYGLA 291
+ ++V++SS++VYG +P E+H T + Y +K EE+ + +
Sbjct: 123 GVK-NLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKAWNAV 181
Query: 292 LTGLRFFTVYG----------PWGRPDMAYFFFTKDIL-QGKTIDV----YKTQDDREVA 336
L LR+F G P G P+ + ++ + + + ++V Y T+D V
Sbjct: 182 L--LRYFNPIGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREVLNVFGNDYDTEDGTGV- 238
Query: 337 RDFTYIDDVVKGCVGALDTAXXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILENLL 396
RD+ ++ D+ KG + AL R+YNLG + V ++V +E
Sbjct: 239 RDYIHVVDLAKGHIAAL----------RKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKAS 288
Query: 397 NTKAKKHVIRMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKW 445
K V+ R GDV +AN SLA K+ G+ L +W
Sbjct: 289 GKKIPYKVVAR-REGDVAACYANPSLALKELGWSAALGLDRMCEDLWRW 336
>UNIPROTKB|Q14376 [details] [associations]
symbol:GALE "UDP-glucose 4-epimerase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=EXP;IDA] [GO:0019388 "galactose catabolic
process" evidence=IDA;TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0005975 "carbohydrate metabolic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
Reactome:REACT_111217 InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214
InterPro:IPR016040 GO:GO:0005829 GO:GO:0000166 GO:GO:0044281
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
GO:GO:0019388 KO:K01784 EMBL:AL031295 OMA:ADKAWNA CTD:2582
EMBL:L41668 EMBL:AF022382 EMBL:BC001273 EMBL:BC050685
IPI:IPI00553131 RefSeq:NP_000394.2 RefSeq:NP_001008217.1
RefSeq:NP_001121093.1 UniGene:Hs.632380 PDB:1EK5 PDB:1EK6 PDB:1HZJ
PDB:1I3K PDB:1I3L PDB:1I3M PDB:1I3N PDBsum:1EK5 PDBsum:1EK6
PDBsum:1HZJ PDBsum:1I3K PDBsum:1I3L PDBsum:1I3M PDBsum:1I3N
ProteinModelPortal:Q14376 SMR:Q14376 IntAct:Q14376 STRING:Q14376
PhosphoSite:Q14376 DMDM:68056598 PaxDb:Q14376 PRIDE:Q14376
DNASU:2582 Ensembl:ENST00000374497 GeneID:2582 KEGG:hsa:2582
UCSC:uc001bhv.1 GeneCards:GC01M024122 HGNC:HGNC:4116 HPA:HPA007340
MIM:230350 MIM:606953 neXtProt:NX_Q14376 Orphanet:79238
PharmGKB:PA28531 HOVERGEN:HBG001396 InParanoid:Q14376
OrthoDB:EOG4B5P5D PhylomeDB:Q14376 BioCyc:MetaCyc:HS04117-MONOMER
SABIO-RK:Q14376 BindingDB:Q14376 ChEMBL:CHEMBL5843
EvolutionaryTrace:Q14376 GenomeRNAi:2582 NextBio:10213
ArrayExpress:Q14376 Bgee:Q14376 CleanEx:HS_GALE
Genevestigator:Q14376 GermOnline:ENSG00000117308 Uniprot:Q14376
Length = 348
Score = 258 (95.9 bits), Expect = 9.1e-22, P = 9.1e-22
Identities = 98/349 (28%), Positives = 159/349 (45%)
Query: 121 VLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYD-----P-SLKRARQKLLQKHQVFI 174
VLVTG AG++GSH L L + G + +DNF++ + P SL+R ++ L V
Sbjct: 5 VLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQE--LTGRSVEF 62
Query: 175 VEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSV 234
E D+ D L +LF F V+H A V ++Q P Y N+ G + LLE+ K+
Sbjct: 63 EEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH 122
Query: 235 NPQPSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTY---NHIYGLA 291
+ ++V++SS++VYG +P E+H T + Y +K EE+ + +
Sbjct: 123 GVK-NLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAV 181
Query: 292 LTGLRFFTVYG----------PWGRPDMAYFFFTKDIL-QGKTIDV----YKTQDDREVA 336
L LR+F G P G P+ + ++ + + + ++V Y T+D V
Sbjct: 182 L--LRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGV- 238
Query: 337 RDFTYIDDVVKGCVGALDTAXXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILENLL 396
RD+ ++ D+ KG + AL R+YNLG + V ++V +E
Sbjct: 239 RDYIHVVDLAKGHIAAL----------RKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKAS 288
Query: 397 NTKAKKHVIRMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKW 445
K V+ R GDV +AN SLA ++ G+ L +W
Sbjct: 289 GKKIPYKVVAR-REGDVAACYANPSLAQEELGWTAALGLDRMCEDLWRW 336
>UNIPROTKB|Q4QRB0 [details] [associations]
symbol:Gale "Gale protein" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 RGD:621493 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 HOGENOM:HOG000168001 GO:GO:0003978
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 GO:GO:0019388 KO:K01784 EMBL:CH473968
GeneTree:ENSGT00530000063128 CTD:2582 HOVERGEN:HBG001396
UniGene:Rn.29908 EMBL:BC097293 IPI:IPI00882523 RefSeq:NP_542961.2
SMR:Q4QRB0 STRING:Q4QRB0 Ensembl:ENSRNOT00000013322 GeneID:114860
KEGG:rno:114860 InParanoid:Q4QRB0 NextBio:618919
Genevestigator:Q4QRB0 Uniprot:Q4QRB0
Length = 348
Score = 258 (95.9 bits), Expect = 9.1e-22, P = 9.1e-22
Identities = 100/349 (28%), Positives = 158/349 (45%)
Query: 121 VLVTGAAGFVGSHCSLALKKRGDGVLGLDNF-NSYYD----P-SLKRARQKLLQKHQVFI 174
VLVTG AG++GSH L L + G + +DNF NS P SL+R ++ L V
Sbjct: 5 VLVTGGAGYIGSHTVLELLEAGYSPVVIDNFHNSIRGEDSMPESLRRVQE--LTGRSVEF 62
Query: 175 VEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSV 234
E D+ D L LF F V+H A V ++Q P Y N+ G + LLE+ ++
Sbjct: 63 EEMDILDQAALQHLFKKHNFKAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMRAH 122
Query: 235 NPQPSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTY---NHIYGLA 291
+ S+V++SS++VYG +P E+H T + Y +K EE+ + +
Sbjct: 123 GVK-SLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIQDLCRADTAWNAV 181
Query: 292 LTGLRFFTVYG----------PWGRPDMAYFFFTKDIL-QGKTIDV----YKTQDDREVA 336
L LR+F G P G P+ + ++ + + + ++V Y T+D V
Sbjct: 182 L--LRYFNPIGAHASGRIGEDPQGIPNNLMPYVSQVAIGRREALNVFGDDYATEDGTGV- 238
Query: 337 RDFTYIDDVVKGCVGALDTAXXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILENLL 396
RD+ ++ D+ KG + AL R+YNLG + V ++V +E
Sbjct: 239 RDYIHVVDLAKGHIAALKKLKEQ----------CGCRIYNLGTGTGYSVLQMVQAMEKAS 288
Query: 397 NTKAKKHVIRMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKW 445
K V+ R GDV +AN SLA+++ G+ L +W
Sbjct: 289 GKKIPYKVVAR-REGDVAACYANPSLAHEELGWTAALGLDRMCEDLWRW 336
>TIGR_CMR|CBU_0829 [details] [associations]
symbol:CBU_0829 "NAD dependent epimerase/dehydratase
family protein" species:227377 "Coxiella burnetii RSA 493"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0044237 KO:K01784
HOGENOM:HOG000167994 RefSeq:NP_819849.2 ProteinModelPortal:Q83DA9
PRIDE:Q83DA9 GeneID:1208722 KEGG:cbu:CBU_0829 PATRIC:17930355
OMA:ANICAMK ProtClustDB:CLSK914342
BioCyc:CBUR227377:GJ7S-824-MONOMER Uniprot:Q83DA9
Length = 331
Score = 255 (94.8 bits), Expect = 2.0e-21, P = 2.0e-21
Identities = 93/340 (27%), Positives = 150/340 (44%)
Query: 118 GMTVLVTGAAGFVGSHC-SLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVE 176
G +V G AG +GSH L++ V+ DNF +L +A + + +++ +
Sbjct: 6 GKKFVVIGGAGLIGSHTVDRLLQEDVAEVIIYDNFVRGTRENLAQALRD--PRTKIYDIG 63
Query: 177 GDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNP 236
GD+N +L V V H AA + + P+S +NI G N+LE C +
Sbjct: 64 GDINQTDILNTALKGVD--GVFHFAA-LWLLQCYEYPRSAFQTNIQGTFNVLETCVAQGV 120
Query: 237 QPSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLR 296
+ +V++SS+SVYG + P +E+H + + Y ATK AGE +A Y+H YGL GLR
Sbjct: 121 K-RLVFSSSASVYGDALEEPMTEAHPFNS-RTFYGATKIAGEAMATAYHHRYGLPFVGLR 178
Query: 297 FFTVYGPWGRPDM--AYFFFTKDIL----QGKTIDVYKTQDDREVARDFTYIDDVVKGCV 350
+ VYGP R D AY +L +G+ + +Y D A DF Y++D C
Sbjct: 179 YMNVYGP--RQDYRGAYIAVIMKMLDALDKGQPMTLY---GDGSQAYDFVYVED----CA 229
Query: 351 GALDTAXXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAKKHVIRMPRN 410
A A YN+G + L ++ + T ++ +P+
Sbjct: 230 AANICAMKADTVD---------EYYNVGTGKRTSILELAKEIQKITGTS--DNIQFLPQG 278
Query: 411 GDVPYTHANV-SLAYKDFGYKPTTDLAAGLRKFVKWYVSY 449
A + G+K L GL++ ++W S+
Sbjct: 279 TTFVKNRIGCPKKAAEQIGFKAEVGLTEGLQRLIEWRRSH 318
>TIGR_CMR|CJE_1513 [details] [associations]
symbol:CJE_1513 "NAD-dependent epimerase/dehydratase
family protein" species:195099 "Campylobacter jejuni RM1221"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009225 EMBL:CP000025 GenomeReviews:CP000025_GR
HOGENOM:HOG000167994 GO:GO:0008460 PANTHER:PTHR10366:SF41
RefSeq:YP_179498.1 ProteinModelPortal:Q5HT87 STRING:Q5HT87
GeneID:3232144 KEGG:cjr:CJE1513 PATRIC:20044818 OMA:EVFRLCC
ProtClustDB:CLSK864552 BioCyc:CJEJ195099:GJC0-1541-MONOMER
Uniprot:Q5HT87
Length = 323
Score = 255 (94.8 bits), Expect = 2.0e-21, P = 2.0e-21
Identities = 77/236 (32%), Positives = 115/236 (48%)
Query: 121 VLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSY-YDPSLKRARQKLLQKHQVFIVEGDL 179
+LVTGA GF+GSH +L K+G V L +NS+ + L+++ L+ +V V GDL
Sbjct: 4 ILVTGADGFIGSHLCESLVKKGFKVRALSQYNSFNFWGHLEKS--PFLKDMEV--VSGDL 59
Query: 180 NDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQPS 239
D+ K+ + + HL A + Y+ PQSYV +N+ G +N+LE K N
Sbjct: 60 RDSFFCEKITKNIDA--IFHLGALIAIPYSYTAPQSYVDTNVNGTLNMLEAAKK-NEISH 116
Query: 240 IVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRFFT 299
+ S+S VYG VP E H QP S Y+A+K A + +A +Y + + L + R F
Sbjct: 117 FIHTSTSEVYGTAFYVPIDEKHPL-QPQSPYSASKIAADMMALSYYNSFNLNVNIARPFN 175
Query: 300 VYGPWGRPDMAYFFFTKDILQG-KTIDVYKTQDDREVARDFTYIDDVVKGCVGALD 354
YGP IL G K I + D RD ++ D +G + L+
Sbjct: 176 TYGPRQSARAIIPTIITQILSGAKEIKL----GDLSPKRDLNFVLDTCEGFISLLN 227
>TIGR_CMR|CHY_0545 [details] [associations]
symbol:CHY_0545 "UDP-glucose 4-epimerase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=ISS] [GO:0006012 "galactose
metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
RefSeq:YP_359403.1 ProteinModelPortal:Q3AEN1 SMR:Q3AEN1
STRING:Q3AEN1 GeneID:3728483 KEGG:chy:CHY_0545 PATRIC:21274237
OMA:DTEDGSC BioCyc:CHYD246194:GJCN-546-MONOMER Uniprot:Q3AEN1
Length = 327
Score = 248 (92.4 bits), Expect = 1.2e-20, P = 1.2e-20
Identities = 90/341 (26%), Positives = 153/341 (44%)
Query: 121 VLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGDLN 180
+LVTG AG++GSH L + + VL +DN L + +K + IV GD
Sbjct: 2 ILVTGGAGYIGSHIVRQLCLKNEKVLVVDN--------LSKGHKKAVDTRAKLIV-GDFG 52
Query: 181 DAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQPSI 240
D LL ++F V+H+AAQ+ V +M P+ Y NI+ ++LL+V N + +
Sbjct: 53 DENLLLEIFKKYDIKAVIHMAAQSLVGESMSQPEKYFEENISKTLSLLKVMLKANVK-KM 111
Query: 241 VWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRFFTV 300
V++S+++VYG + P +E +P ++Y +K E+ Y I+G LR+F
Sbjct: 112 VFSSTAAVYGEPEKWPITEDF-PQKPTNVYGYSKLVIEQCLEWYRQIHGFNYVSLRYFNA 170
Query: 301 YG--PWG------RPDMAYF-FFTKDIL-QGKTIDVYKTQ---DDREVARDFTYIDDVVK 347
G P G P+ K IL + + + V+ T D RD+ +++D+ +
Sbjct: 171 AGADPSGDIGEDHNPETHLIPLIFKVILGEQEELTVFGTDYPTPDGTCIRDYIHVNDLAE 230
Query: 348 GCVGALDTAXXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAK-KHVIR 406
+ AL+ VYNLGN V ++ + E + K K ++ R
Sbjct: 231 AHILALNKLNKDESG-----------VYNLGNQKGFSVKEIIKVAEEVTGVKVKVRYGQR 279
Query: 407 MPRNGDVPYTHANVSLAYKDFGYKPTT-DLAAGLRKFVKWY 446
P GD A+ K+ + P D+ ++ +W+
Sbjct: 280 RP--GDPAVLVASSEKIQKELNFTPKFGDIKTIVQTAWEWH 318
>MGI|MGI:1921496 [details] [associations]
symbol:Gale "galactose-4-epimerase, UDP" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=ISO;IDA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005975 "carbohydrate
metabolic process" evidence=IEA] [GO:0006012 "galactose metabolic
process" evidence=IDA] [GO:0016853 "isomerase activity"
evidence=IEA] [GO:0016857 "racemase and epimerase activity, acting
on carbohydrates and derivatives" evidence=IEA] [GO:0019388
"galactose catabolic process" evidence=ISO] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214
InterPro:IPR016040 MGI:MGI:1921496 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087 HOGENOM:HOG000168001
GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
GO:GO:0019388 KO:K01784 GeneTree:ENSGT00530000063128 OMA:ADKAWNA
CTD:2582 HOVERGEN:HBG001396 OrthoDB:EOG4B5P5D EMBL:BC027438
IPI:IPI00153129 RefSeq:NP_848476.1 UniGene:Mm.247946
ProteinModelPortal:Q8R059 SMR:Q8R059 STRING:Q8R059
PhosphoSite:Q8R059 PaxDb:Q8R059 PRIDE:Q8R059
Ensembl:ENSMUST00000102540 Ensembl:ENSMUST00000102541 GeneID:74246
KEGG:mmu:74246 InParanoid:Q8R059 ChiTaRS:GALE NextBio:340230
Bgee:Q8R059 CleanEx:MM_GALE Genevestigator:Q8R059
GermOnline:ENSMUSG00000028671 Uniprot:Q8R059
Length = 347
Score = 252 (93.8 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 94/347 (27%), Positives = 157/347 (45%)
Query: 121 VLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYY--DPSLKRARQKL--LQKHQVFIVE 176
VLVTG AG++GSH L L + G + +DNF++ + S+ + +++ L V E
Sbjct: 4 VLVTGGAGYIGSHTVLELLEAGYSPVVIDNFHNAIRGEDSMPESLRRVQELTGRSVEFEE 63
Query: 177 GDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNP 236
D+ D L LF F V+H A V ++Q P Y N+ G + LLE+ ++
Sbjct: 64 MDILDQAALQHLFKKHSFKAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMRAHGV 123
Query: 237 QPSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTY---NHIYGLALT 293
+ ++V++SS++VYG +P E+H T + Y +K EE+ + + L
Sbjct: 124 K-NLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCRADTAWNAVL- 181
Query: 294 GLRFFTVYG----------PWGRPDMAYFFFTKDIL-QGKTIDV----YKTQDDREVARD 338
LR+F G P G P+ + ++ + + + ++V Y T+D V RD
Sbjct: 182 -LRYFNPIGAHASGRIGEDPQGIPNNLMPYVSQVAIGRREALNVFGDDYATEDGTGV-RD 239
Query: 339 FTYIDDVVKGCVGALDTAXXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILENLLNT 398
+ ++ D+ KG + AL R YNLG + V ++V +E
Sbjct: 240 YIHVVDLAKGHIAALKKLKEQ----------CGCRTYNLGTGTGYSVLQMVQAMEKASGK 289
Query: 399 KAKKHVIRMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKW 445
K V+ R GDV +AN SLA+++ G+ L +W
Sbjct: 290 KIPYKVVAR-REGDVAACYANPSLAHEELGWTAALGLDRMCEDLWRW 335
>UNIPROTKB|F1NWE5 [details] [associations]
symbol:GALE "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IEA] [GO:0019388 "galactose catabolic process"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GO:GO:0003978 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 GO:GO:0019388
GeneTree:ENSGT00530000063128 OMA:ADKAWNA EMBL:AADN02043722
EMBL:AADN02043721 IPI:IPI00604262 Ensembl:ENSGALT00000006441
Uniprot:F1NWE5
Length = 351
Score = 253 (94.1 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 96/346 (27%), Positives = 155/346 (44%)
Query: 121 VLVTGAAGFVGSHCSLALKKRGDGVLGLDNF-NSYYDP-SLKRARQKLLQKHQVFIV--E 176
+LVTG AG++GSHC L L + G + +DN N+ P +L + Q++ + Q I E
Sbjct: 9 ILVTGGAGYIGSHCVLQLAEAGYEPVVIDNLRNAARGPGALPESLQRVQRIAQTPIAFQE 68
Query: 177 GDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNP 236
D+ D L KLF F+ V+H A V +++ P Y N+ G + LLE ++ +
Sbjct: 69 LDITDGAALRKLFSTHRFSGVMHFAGLKAVGESVRRPLEYYNVNLTGTIRLLEAMEAYSV 128
Query: 237 QPSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEE-IAHTYNHIYGLALTGL 295
+ +IV++SS++VYG +P E H + Y +K EE I G L
Sbjct: 129 R-NIVFSSSATVYGDPQYLPLDEKHPVGGCTNPYGKSKYFIEEMIQDLCKAEKGWNAILL 187
Query: 296 RFFTVYG----------PWGRPDMAYFFFTKDILQGKT--IDV----YKTQDDREVARDF 339
R+F G P G P+ + + + G+ + V Y+T D + RD+
Sbjct: 188 RYFNPIGAHESGMIGEDPQGIPNNLMPYVAQ-VAVGRQEFLSVFGNDYETADGTGI-RDY 245
Query: 340 TYIDDVVKGCVGALDTAXXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILENLLNTK 399
++ D+ KG + AL ++YNLG + V ++V +E +
Sbjct: 246 IHVVDLAKGHIAALKKLKEN----------CGCKIYNLGTGTGYSVLQMVQAMEKASGRE 295
Query: 400 AKKHVIRMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKW 445
K + I R GDV +AN LA ++ G+K L +W
Sbjct: 296 IK-YKITGRREGDVAACYANPELAERELGWKAAFGLDKMCEDLWRW 340
>TIGR_CMR|DET_0204 [details] [associations]
symbol:DET_0204 "NAD-dependent epimerase/dehydratase
family protein" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0009243 "O
antigen biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR020904 Pfam:PF01370 PROSITE:PS00061 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0016491 EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0044237
GO:GO:0055114 KO:K01784 HOGENOM:HOG000167994 RefSeq:YP_180952.1
ProteinModelPortal:Q3Z9Z7 STRING:Q3Z9Z7 GeneID:3230493
KEGG:det:DET0204 PATRIC:21607483 OMA:NTLATHN ProtClustDB:CLSK837597
BioCyc:DETH243164:GJNF-204-MONOMER Uniprot:Q3Z9Z7
Length = 312
Score = 243 (90.6 bits), Expect = 4.3e-20, P = 4.3e-20
Identities = 91/321 (28%), Positives = 145/321 (45%)
Query: 121 VLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGDLN 180
VLVTG GF+GSH AL +G V +DN ++ SL+ K Q+ ++ I+ G+L
Sbjct: 4 VLVTGGCGFIGSHLVDALLSQGFKVRVMDNLSN---GSLENL--KCGQRDKLEIINGNLT 58
Query: 181 DAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQPSI 240
D LL V V HLAA A V+ + ++ + +N NLLE + N +
Sbjct: 59 DKFLLDSA--VKGCETVFHLAAHANVQNSAKDTGIDLENNTLATHNLLEAMRR-NRVDRL 115
Query: 241 VWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRFFTV 300
V+ASS++VYG + E + P SLY A+K AGE + Y+H+YGL T RF +
Sbjct: 116 VFASSAAVYGESGLTVLDEDYGPLLPISLYGASKLAGEGLISAYSHLYGLKATMFRFANI 175
Query: 301 YGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGALDTAXXXX 360
G + Y F ++ L+ + D + ++ + ++ D V G + + +
Sbjct: 176 VGSRRHSGVIYDFVSR--LRQNPSSLLVLGDGSQ-SKPYLHVSDCVAGMLLGFEKSTK-- 230
Query: 361 XXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAKKHVIRMPRNG---DVPYTH 417
L +YNLG V V + ++ + + K + G D P
Sbjct: 231 ----------NLGLYNLGTPDSVAVRDIACLVASEMGLKNVCYSYSGGERGWQGDAPQVR 280
Query: 418 ANVSLAYKDFGYKPT-TDLAA 437
++S + G+KP T L A
Sbjct: 281 FDIS-RIRTLGFKPKFTSLQA 300
>UNIPROTKB|P09147 [details] [associations]
symbol:galE species:83333 "Escherichia coli K-12"
[GO:0006012 "galactose metabolic process" evidence=IDA;IMP]
[GO:0005975 "carbohydrate metabolic process" evidence=IMP]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0042802 "identical protein binding"
evidence=IPI] [GO:0070403 "NAD+ binding" evidence=IDA] [GO:0033499
"galactose catabolic process via UDP-galactose" evidence=IMP]
[GO:0005829 "cytosol" evidence=IDA] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=IEA;IDA] [GO:0009242 "colanic acid
biosynthetic process" evidence=IEP;IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 UniPathway:UPA00214
InterPro:IPR016040 GO:GO:0005829 Gene3D:3.40.50.720 GO:GO:0070403
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR eggNOG:COG1087 HOGENOM:HOG000168001
GO:GO:0003978 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 GO:GO:0009242
GO:GO:0033499 EMBL:X06226 OMA:THAPIDA EMBL:X51449 EMBL:U07867
EMBL:J01613 PIR:S02089 RefSeq:NP_415280.3 RefSeq:YP_489032.1
PDB:1A9Y PDB:1A9Z PDB:1KVQ PDB:1KVR PDB:1KVS PDB:1KVT PDB:1KVU
PDB:1LRJ PDB:1LRK PDB:1LRL PDB:1NAH PDB:1NAI PDB:1UDA PDB:1UDB
PDB:1UDC PDB:1XEL PDB:2UDP PDBsum:1A9Y PDBsum:1A9Z PDBsum:1KVQ
PDBsum:1KVR PDBsum:1KVS PDBsum:1KVT PDBsum:1KVU PDBsum:1LRJ
PDBsum:1LRK PDBsum:1LRL PDBsum:1NAH PDBsum:1NAI PDBsum:1UDA
PDBsum:1UDB PDBsum:1UDC PDBsum:1XEL PDBsum:2UDP
ProteinModelPortal:P09147 SMR:P09147 DIP:DIP-9728N IntAct:P09147
SWISS-2DPAGE:P09147 PRIDE:P09147 EnsemblBacteria:EBESCT00000004431
EnsemblBacteria:EBESCT00000004432 EnsemblBacteria:EBESCT00000004433
EnsemblBacteria:EBESCT00000014770 GeneID:12932906 GeneID:945354
KEGG:ecj:Y75_p0732 KEGG:eco:b0759 PATRIC:32116719 EchoBASE:EB0357
EcoGene:EG10362 ProtClustDB:PRK10675
BioCyc:EcoCyc:UDPGLUCEPIM-MONOMER BioCyc:ECOL316407:JW0742-MONOMER
BioCyc:MetaCyc:UDPGLUCEPIM-MONOMER SABIO-RK:P09147
EvolutionaryTrace:P09147 Genevestigator:P09147 Uniprot:P09147
Length = 338
Score = 247 (92.0 bits), Expect = 4.7e-20, P = 4.7e-20
Identities = 99/340 (29%), Positives = 156/340 (45%)
Query: 119 MTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNF-NSYYDPSLKRARQKLLQKHQVFIVEG 177
M VLVTG +G++GSH + L + G V+ LDN NS S+ ++L KH F VEG
Sbjct: 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNS--KRSVLPVIERLGGKHPTF-VEG 57
Query: 178 DLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQ 237
D+ + L+T++ V+H A V ++Q P Y +N+ G + L+ ++ N +
Sbjct: 58 DIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVK 117
Query: 238 PSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHI---YGLALTG 294
+ +++SS++VYG ++P+ ES T P S Y +K E+I + +AL
Sbjct: 118 -NFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIAL-- 174
Query: 295 LRFFTVYG----------PWGRPD--MAYFFFT----KDILQGKTIDVYKTQDDREVARD 338
LR+F G P G P+ M Y +D L D Y T+D V RD
Sbjct: 175 LRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGND-YPTEDGTGV-RD 232
Query: 339 FTYIDDVVKGCVGALDTAXXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILENLLNT 398
+ ++ D+ G V A++ P + +YNLG VG V + N +
Sbjct: 233 YIHVMDLADGHVVAMEKLANK---------PG-VHIYNLG----AGVGNSVLDVVNAFSK 278
Query: 399 KAKKHV---IRMPRNGDVPYTHANVSLAYKDFGYKPTTDL 435
K V R GD+P A+ S A ++ ++ T L
Sbjct: 279 ACGKPVNYHFAPRREGDLPAYWADASKADRELNWRVTRTL 318
>TAIR|locus:2138121 [details] [associations]
symbol:UGE2 "UDP-D-glucose/UDP-D-galactose 4-epimerase 2"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0046983 "protein dimerization activity" evidence=IPI]
[GO:0042546 "cell wall biogenesis" evidence=IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 UniPathway:UPA00214
InterPro:IPR016040 GO:GO:0005829 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087 HOGENOM:HOG000168001
GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:AL078468 EMBL:AL161560 KO:K01784 GO:GO:0042546
ProtClustDB:PLN02240 EMBL:BT008539 IPI:IPI00516246 PIR:T08911
RefSeq:NP_194123.1 UniGene:At.3390 ProteinModelPortal:Q9T0A7
SMR:Q9T0A7 IntAct:Q9T0A7 STRING:Q9T0A7 PaxDb:Q9T0A7 PRIDE:Q9T0A7
EnsemblPlants:AT4G23920.1 GeneID:828492 KEGG:ath:AT4G23920
TAIR:At4g23920 InParanoid:Q9T0A7 OMA:THAPIDA PhylomeDB:Q9T0A7
Genevestigator:Q9T0A7 GermOnline:AT4G23920 Uniprot:Q9T0A7
Length = 350
Score = 250 (93.1 bits), Expect = 7.9e-20, P = 7.9e-20
Identities = 95/346 (27%), Positives = 154/346 (44%)
Query: 120 TVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQK-HQVFIVEGD 178
+VLVTG AG++GSH L L + G + +DN+++ SL+R ++ + +++ + D
Sbjct: 4 SVLVTGGAGYIGSHTVLQLLEGGYSAVVVDNYDNSSAASLQRVKKLAGENGNRLSFHQVD 63
Query: 179 LNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQP 238
L D P L K+F F V+H A V +++ P Y +NI G V LLEV +
Sbjct: 64 LRDRPALEKIFSETKFDAVIHFAGLKAVGESVEKPLLYYNNNIVGTVTLLEVMAQYGCK- 122
Query: 239 SIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIA---HTYNHIYGLALTGL 295
++V++SS++VYG +VP +E + Y TK EEI H + + + L L
Sbjct: 123 NLVFSSSATVYGWPKEVPCTEESPISA-TNPYGRTKLFIEEICRDVHRSDSEWKIIL--L 179
Query: 296 RFFTVYG----------PWGRPDMAYFFFTKDILQGKT--IDV----YKTQDDREVARDF 339
R+F G P G P+ + + + G+ + V YKT+D V RD+
Sbjct: 180 RYFNPVGAHPSGYIGEDPLGVPNNL-MPYVQQVAVGRRPHLTVFGTDYKTKDGTGV-RDY 237
Query: 340 TYIDDVVKGCVGALDTAXXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILENLLNTK 399
++ D+ G + AL VYNLG + V +V+ E K
Sbjct: 238 IHVMDLADGHIAAL---------RKLDDLKISCEVYNLGTGNGTSVLEMVAAFEKASGKK 288
Query: 400 AKKHVIRMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKW 445
V+ R GD +A+ A ++ +K + R W
Sbjct: 289 IPL-VMAGRRPGDAEVVYASTEKAERELNWKAKNGIEEMCRDLWNW 333
>UNIPROTKB|Q6A1A4 [details] [associations]
symbol:galE "UDP-galactose 4-epimerase" species:644
"Aeromonas hydrophila" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IDA] [GO:0006012 "galactose metabolic process"
evidence=IC] [GO:0042803 "protein homodimerization activity"
evidence=IDA] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:AJ785765 ProteinModelPortal:Q6A1A4 SMR:Q6A1A4 Uniprot:Q6A1A4
Length = 338
Score = 238 (88.8 bits), Expect = 2.3e-18, P = 2.3e-18
Identities = 88/336 (26%), Positives = 152/336 (45%)
Query: 119 MTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNF-NSYYDPSLKRARQKLLQKHQVFIVEG 177
M VLVTG +G++GSH + L + G V+ LDN NS S+ ++L K F VEG
Sbjct: 1 MRVLVTGGSGYIGSHTCVQLLQSGHDVVILDNLCNS--KRSVLPVIERLSGKQPTF-VEG 57
Query: 178 DLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQ 237
D+ + L+T++ V+H A V ++ P Y +N+ G + L+ ++ N +
Sbjct: 58 DIRNEALMTEILHDHAIETVIHFAGLKAVGESVAKPLEYYDNNVNGTLRLISAMRAANVK 117
Query: 238 PSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHI---YGLALTG 294
+ +++SS++VYG ++P+ ES T P S Y +K E+I + +AL
Sbjct: 118 -NFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPEWSIAL-- 174
Query: 295 LRFFTVYG----------PWGRPDMAYFFFTKDILQGK--TIDVYKTQ---DDREVARDF 339
LR+F G P G P+ + + + G+ ++ ++ +D RD+
Sbjct: 175 LRYFNPVGAHPSGDMGEDPQGIPNNLIPYIAQ-VAVGRRDSLAIFGNDYPPEDATAVRDY 233
Query: 340 TYIDDVVKGCVGALDTAXXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILENLLNTK 399
++ D+ G V A+ P + +YNLG V +V+
Sbjct: 234 IHVMDLADGHVAAMQQLADK---------PG-VHIYNLGAGIGSSVLDVVNAFSKACGKP 283
Query: 400 AKKHVIRMPRNGDVPYTHANVSLAYKDFGYKPTTDL 435
K H R+GD+P A+ + A K+ ++ T L
Sbjct: 284 VKYHFAPR-RDGDLPAYWADATKADKELNWRVTRTL 318
>UNIPROTKB|Q9KLH0 [details] [associations]
symbol:VC_A0774 "UDP-glucose 4-epimerase" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=ISS] [GO:0006012
"galactose metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 HSSP:P09147 PIR:F82419
RefSeq:NP_233160.1 ProteinModelPortal:Q9KLH0 SMR:Q9KLH0
DNASU:2612322 GeneID:2612322 KEGG:vch:VCA0774 PATRIC:20086102
OMA:NIDIRNK ProtClustDB:CLSK869762 Uniprot:Q9KLH0
Length = 338
Score = 237 (88.5 bits), Expect = 3.2e-18, P = 3.2e-18
Identities = 98/335 (29%), Positives = 151/335 (45%)
Query: 119 MTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGD 178
M VLVTG G++GSH + + + G + LDN + L R +K++ F V+GD
Sbjct: 1 MKVLVTGGMGYIGSHTCIQMIQAGMTPVILDNLYNSKVTVLDRI-EKVIGVRPQF-VQGD 58
Query: 179 LNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQP 238
+ D LL L V+H A V ++Q P Y +N+ G + L+ + +
Sbjct: 59 IRDKALLVDLMQQHNIEAVVHFAGLKAVGESVQKPLEYYDNNVNGTLVLVAAMREAGVK- 117
Query: 239 SIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIY-GLALTGLRF 297
S+V++SS++VYG T VP +ES T + A+ Y +K EE + ++T LR+
Sbjct: 118 SLVFSSSATVYGEPTSVPITESFPT-KAANPYGRSKLMVEECLTDFQKANPDWSITLLRY 176
Query: 298 FTVYG----------PWGRPDMAYFFFTKDILQGKT--IDV----YKTQDDREVARDFTY 341
F G P G P+ F T+ + G+ + V Y T+D V RD+ +
Sbjct: 177 FNPVGSHPSGELGEDPQGIPNNLMPFVTQ-VAVGRREYLSVFGSDYPTKDGTGV-RDYIH 234
Query: 342 IDDVVKGCVGALDTAXXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILENLLN-TKA 400
+ D+ G + AL A L +YNLG V +V E T
Sbjct: 235 VMDLADGHIAALKKVGTC----------AGLHIYNLGTGKGYSVLDVVKAFETASGRTVP 284
Query: 401 KKHVIRMPRNGDVPYTHANVSLAYKDFGYKPTTDL 435
K V R P GD+ A+ + A +D G+K T +L
Sbjct: 285 YKLVDRRP--GDIAEYWADPTKAAQDLGWKATRNL 317
>TIGR_CMR|VC_A0774 [details] [associations]
symbol:VC_A0774 "UDP-glucose 4-epimerase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=ISS] [GO:0006012 "galactose
metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 HSSP:P09147 PIR:F82419
RefSeq:NP_233160.1 ProteinModelPortal:Q9KLH0 SMR:Q9KLH0
DNASU:2612322 GeneID:2612322 KEGG:vch:VCA0774 PATRIC:20086102
OMA:NIDIRNK ProtClustDB:CLSK869762 Uniprot:Q9KLH0
Length = 338
Score = 237 (88.5 bits), Expect = 3.2e-18, P = 3.2e-18
Identities = 98/335 (29%), Positives = 151/335 (45%)
Query: 119 MTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGD 178
M VLVTG G++GSH + + + G + LDN + L R +K++ F V+GD
Sbjct: 1 MKVLVTGGMGYIGSHTCIQMIQAGMTPVILDNLYNSKVTVLDRI-EKVIGVRPQF-VQGD 58
Query: 179 LNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQP 238
+ D LL L V+H A V ++Q P Y +N+ G + L+ + +
Sbjct: 59 IRDKALLVDLMQQHNIEAVVHFAGLKAVGESVQKPLEYYDNNVNGTLVLVAAMREAGVK- 117
Query: 239 SIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIY-GLALTGLRF 297
S+V++SS++VYG T VP +ES T + A+ Y +K EE + ++T LR+
Sbjct: 118 SLVFSSSATVYGEPTSVPITESFPT-KAANPYGRSKLMVEECLTDFQKANPDWSITLLRY 176
Query: 298 FTVYG----------PWGRPDMAYFFFTKDILQGKT--IDV----YKTQDDREVARDFTY 341
F G P G P+ F T+ + G+ + V Y T+D V RD+ +
Sbjct: 177 FNPVGSHPSGELGEDPQGIPNNLMPFVTQ-VAVGRREYLSVFGSDYPTKDGTGV-RDYIH 234
Query: 342 IDDVVKGCVGALDTAXXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILENLLN-TKA 400
+ D+ G + AL A L +YNLG V +V E T
Sbjct: 235 VMDLADGHIAALKKVGTC----------AGLHIYNLGTGKGYSVLDVVKAFETASGRTVP 284
Query: 401 KKHVIRMPRNGDVPYTHANVSLAYKDFGYKPTTDL 435
K V R P GD+ A+ + A +D G+K T +L
Sbjct: 285 YKLVDRRP--GDIAEYWADPTKAAQDLGWKATRNL 317
>TIGR_CMR|SO_3167 [details] [associations]
symbol:SO_3167 "dTDP-glucose 4,6-dehydratase"
species:211586 "Shewanella oneidensis MR-1" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0008460
TIGRFAMs:TIGR01181 HSSP:P27830 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 RefSeq:NP_718723.1 ProteinModelPortal:Q8ECH5
SMR:Q8ECH5 GeneID:1170861 KEGG:son:SO_3167 PATRIC:23526018
OMA:IDLIIHK ProtClustDB:CLSK907039 Uniprot:Q8ECH5
Length = 343
Score = 237 (88.5 bits), Expect = 4.2e-18, P = 4.2e-18
Identities = 92/356 (25%), Positives = 160/356 (44%)
Query: 119 MTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGD 178
M +LVTG AGF+GS L ++ + V+ L NF+ S + + + V+ D
Sbjct: 1 MRILVTGGAGFIGSALVRMLIEQTESVV-L-NFDKLTYASHPESLAGVADNERYHFVQAD 58
Query: 179 LNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSV---- 234
+ D L ++ ++HLAA++ V ++ P ++ +NI G LLE C+S
Sbjct: 59 ICDRARLEQVLQQFQPDLMMHLAAESHVDRSIDGPAEFIQTNIVGTYTLLEACRSYYQTL 118
Query: 235 -NPQPS---IVWASSSSVYGLNTQVP-FSESHRTDQPASLYAATKKAGEEIAHTYNHIYG 289
Q + S+ V+G T+ FSE+ D P+S Y+A+K + + + ++ Y
Sbjct: 119 GQAQQRRFRLHHISTDEVFGSLTETGLFSETSAYD-PSSPYSASKASADHLVRAWHRTYA 177
Query: 290 LALTGLRFFTVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGC 349
L + YGP+ P+ + LQ K + +Y + ++V RD+ Y+DD VK
Sbjct: 178 LPIVITNCSNNYGPFQYPEKLIPLMVSNALQSKPLPIYG--NGQQV-RDWLYVDDHVK-- 232
Query: 350 VGALDTAXXXXXXXXXXXXPAQLRVYNLGN----TSPVPVGRLVSILENLLNTKAK---- 401
AL + YN+G T+ V + S+LE L+ T +
Sbjct: 233 --ALYLVATQGQLG---------QTYNIGGSCEQTNLTVVRHICSLLEELVPTHPQSLAM 281
Query: 402 ---------KHVIRMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKWYVS 448
++V+ P + DV Y + S ++ G++P +GLRK V+W ++
Sbjct: 282 GNAGFADLIQYVVDRPGH-DVRYA-IDASKIQRELGWRPQESFESGLRKTVEWIIN 335
>TIGR_CMR|BA_0507 [details] [associations]
symbol:BA_0507 "NAD-dependent epimerase/dehydratase family
protein" species:198094 "Bacillus anthracis str. Ames" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0044237 KO:K01784
HOGENOM:HOG000168004 HSSP:P32054 RefSeq:NP_843043.1
RefSeq:YP_017126.1 RefSeq:YP_026759.1 ProteinModelPortal:Q81YX3
DNASU:1087740 EnsemblBacteria:EBBACT00000010883
EnsemblBacteria:EBBACT00000018378 EnsemblBacteria:EBBACT00000021242
GeneID:1087740 GeneID:2816749 GeneID:2850006 KEGG:ban:BA_0507
KEGG:bar:GBAA_0507 KEGG:bat:BAS0479 OMA:IRWSYAV
ProtClustDB:CLSK915839 BioCyc:BANT260799:GJAJ-522-MONOMER
BioCyc:BANT261594:GJ7F-544-MONOMER Uniprot:Q81YX3
Length = 321
Score = 232 (86.7 bits), Expect = 4.3e-18, P = 4.3e-18
Identities = 83/246 (33%), Positives = 116/246 (47%)
Query: 122 LVTGAAGFVGSHCSLALKKRGDGVLGLDNF----NSYYDPSLKRARQKLLQKHQVFIVEG 177
L+TG AGF+GSH + L RG V +DNF N Y+D +K R + I
Sbjct: 6 LITGGAGFIGSHLAEELVGRGYNVTIVDNFYKGKNKYHDELMKEIRV-------IPISVL 58
Query: 178 DLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQ 237
D N L DVV HLAA GV+ M+ + +N G N+L+ ++ +
Sbjct: 59 DKNSIYELVNQHDVV-----FHLAAILGVKTTMEKSIELIETNFDGTRNILQA--ALKGK 111
Query: 238 PSIVWASSSSVYGLNTQVPFSESH-----RTDQPASLYAATKKAGEEIAHTYNHIYGLAL 292
+V+AS+S VYG + PFSE T + YA K E + Y + GL +
Sbjct: 112 KKVVFASTSEVYG-KAKPPFSEEGDRLYGATSKIRWSYAICKTLEETLCLGYA-LEGLPV 169
Query: 293 TGLRFFTVYGPWGRPDMAYFF----FTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKG 348
T +R+F +YGP + D Y F LQG+ I VY D E R FTY+ D V+
Sbjct: 170 TIVRYFNIYGPRAK-DGPYAGVIPRFISAALQGEDILVY---GDGEQTRCFTYVSDAVEA 225
Query: 349 CVGALD 354
+ A+D
Sbjct: 226 TIRAMD 231
>TAIR|locus:2010371 [details] [associations]
symbol:UGE1 "UDP-D-glucose/UDP-D-galactose 4-epimerase 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005829 "cytosol" evidence=IDA;TAS] [GO:0046983 "protein
dimerization activity" evidence=IPI] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0046369 "galactose biosynthetic process"
evidence=IDA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214
InterPro:IPR016040 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005829 GO:GO:0005886 GO:GO:0006950 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 EMBL:AC012187
eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 KO:K01784 EMBL:Z54214 EMBL:AF334724
EMBL:AY054207 EMBL:AY120709 EMBL:BT000032 IPI:IPI00533120
PIR:B86261 PIR:S62783 RefSeq:NP_172738.1 UniGene:At.20506
UniGene:At.27284 ProteinModelPortal:Q42605 SMR:Q42605 IntAct:Q42605
STRING:Q42605 PaxDb:Q42605 PRIDE:Q42605 EnsemblPlants:AT1G12780.1
GeneID:837834 KEGG:ath:AT1G12780 TAIR:At1g12780 InParanoid:Q42605
OMA:CEAILAD PhylomeDB:Q42605 ProtClustDB:PLN02240
BioCyc:ARA:AT1G12780-MONOMER BioCyc:MetaCyc:AT1G12780-MONOMER
Genevestigator:Q42605 GermOnline:AT1G12780 Uniprot:Q42605
Length = 351
Score = 238 (88.8 bits), Expect = 4.4e-18, P = 4.4e-18
Identities = 98/349 (28%), Positives = 154/349 (44%)
Query: 121 VLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKL---LQKHQVFIVEG 177
+LVTG AGF+G+H + L K G V +DNF++ ++ R R+ + L K F + G
Sbjct: 9 ILVTGGAGFIGTHTVVQLLKDGFKVSIIDNFDNSVIEAVDRVRELVGPDLSKKLDFNL-G 67
Query: 178 DLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQ 237
DL + + KLF F V+H A V +++NP+ Y +N+ G +NL E N +
Sbjct: 68 DLRNKGDIEKLFSKQRFDAVIHFAGLKAVGESVENPRRYFDNNLVGTINLYETMAKYNCK 127
Query: 238 PSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYG-LALTGLR 296
+V++SS++VYG ++P E + + Y TK EEIA + LR
Sbjct: 128 -MMVFSSSATVYGQPEKIPCMEDFEL-KAMNPYGRTKLFLEEIARDIQKAEPEWRIILLR 185
Query: 297 FFTVYG----------PWGRPD--MAYFFFTKDILQGKTIDV------YKTQDDREVARD 338
+F G P G P+ M Y + + G+ ++ Y T+D V RD
Sbjct: 186 YFNPVGAHESGSIGEDPKGIPNNLMPYI---QQVAVGRLPELNVYGHDYPTEDGSAV-RD 241
Query: 339 FTYIDDVVKGCVGALDTAXXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILENLLNT 398
+ ++ D+ G + AL YNLG V +V+ E
Sbjct: 242 YIHVMDLADGHIAALRKLFADPKIGCTA--------YNLGTGQGTSVLEMVAAFEK---A 290
Query: 399 KAKKHVIRM-PR-NGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKW 445
KK I++ PR +GD +A+ A K+ G+K + R KW
Sbjct: 291 SGKKIPIKLCPRRSGDATAVYASTEKAEKELGWKAKYGVDEMCRDQWKW 339
>TIGR_CMR|GSU_1815 [details] [associations]
symbol:GSU_1815 "NAD-dependent epimerase/dehydratase
family protein" species:243231 "Geobacter sulfurreducens PCA"
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016829 "lyase activity" evidence=ISS] [GO:0016857 "racemase
and epimerase activity, acting on carbohydrates and derivatives"
evidence=ISS] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0044237 KO:K01710
HOGENOM:HOG000168004 OMA:LGHENFE RefSeq:NP_952865.1
ProteinModelPortal:Q74C60 GeneID:2686299 KEGG:gsu:GSU1815
PATRIC:22026487 ProtClustDB:CLSK828578
BioCyc:GSUL243231:GH27-1866-MONOMER Uniprot:Q74C60
Length = 311
Score = 227 (85.0 bits), Expect = 7.7e-18, P = 7.7e-18
Identities = 74/242 (30%), Positives = 117/242 (48%)
Query: 119 MTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGD 178
M +LVTG AGF+GSH L ++G VL LDNF + S KR +L+ H+ ++ D
Sbjct: 1 MRILVTGGAGFIGSHLCERLLEQGHDVLCLDNF---FTGS-KRNIDRLMDFHRFEVIRHD 56
Query: 179 LNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQP 238
+ + P+L ++ + +LA A + NP + +++ G +N+L + K V +
Sbjct: 57 IIE-PILLEV------DRIYNLACPASPVHYQYNPVKTIKTSVMGTINMLGLAKRVRAR- 108
Query: 239 SIVWASSSSVYGLNTQVPFSESHRTD-QPA---SLYAATKKAGEEIAHTYNHIYGLALTG 294
I+ AS+S VYG T P ES+ + P S Y K+ E + Y+ G+ +
Sbjct: 109 -ILQASTSEVYGDPTIHPQPESYWGNVNPIGIRSCYDEGKRVAETLLMDYHRQNGVDIRI 167
Query: 295 LRFFTVYGP-WGRPD-MAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGA 352
R F YGP D F L+G+ + VY D R F Y+DD++ G V
Sbjct: 168 ARIFNTYGPRMAEHDGRVVSNFVVQALRGEDLTVY---GDGSQTRSFCYVDDLLDGLVTL 224
Query: 353 LD 354
++
Sbjct: 225 ME 226
>TIGR_CMR|BA_1230 [details] [associations]
symbol:BA_1230 "dTDP-glucose 4,6-dehydratase"
species:198094 "Bacillus anthracis str. Ames" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009243
"O antigen biosynthetic process" evidence=ISS] [GO:0019305
"dTDP-rhamnose biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0009225
GO:GO:0008460 TIGRFAMs:TIGR01181 HSSP:P27830 HOGENOM:HOG000168006
KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM RefSeq:NP_843702.1
RefSeq:YP_017844.1 RefSeq:YP_027409.1 PDB:4EGB PDBsum:4EGB
ProteinModelPortal:Q81TP0 SMR:Q81TP0 DNASU:1085406
EnsemblBacteria:EBBACT00000011863 EnsemblBacteria:EBBACT00000016310
EnsemblBacteria:EBBACT00000023983 GeneID:1085406 GeneID:2815086
GeneID:2848339 KEGG:ban:BA_1230 KEGG:bar:GBAA_1230 KEGG:bat:BAS1137
ProtClustDB:CLSK916141 BioCyc:BANT260799:GJAJ-1213-MONOMER
BioCyc:BANT261594:GJ7F-1267-MONOMER Uniprot:Q81TP0
Length = 322
Score = 229 (85.7 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 88/332 (26%), Positives = 146/332 (43%)
Query: 119 MTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSY-YDPSLKRARQKLLQKH-QVFIVE 176
M +LVTG AGF+GS+ + + + + NF++ Y +L K +Q H + V+
Sbjct: 1 MNILVTGGAGFIGSNFVHYMLQSYE-TYKIINFDALTYSGNLNNV--KSIQDHPNYYFVK 57
Query: 177 GDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNP 236
G++ + LL + +++ AA++ V +++NP + +N+ G V LLE+ K P
Sbjct: 58 GEIQNGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKY-P 116
Query: 237 QPSIVWASSSSVYG-LNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGL 295
+V S+ VYG L F+E P S Y+++K + + IA Y Y L +
Sbjct: 117 HIKLVQVSTDEVYGSLGKTGRFTEETPL-APNSPYSSSKASADMIALAYYKTYQLPVIVT 175
Query: 296 RFFTVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGALDT 355
R YGP+ P+ + L+GK + +Y D V RD+ ++ D C A+D
Sbjct: 176 RCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYG--DGLNV-RDWLHVTD---HC-SAIDV 228
Query: 356 AXXXXXXXXXXXXPAQLRVYNLG-NTSPVPVGRLVSILENLLNTKAKKHVIRMPRNGDVP 414
VYN+G N V + I+ L TK + D
Sbjct: 229 VLHKGRVG---------EVYNIGGNNEKTNVEVVEQIITLLGKTKKDIEYVTDRLGHDRR 279
Query: 415 YTHANVSLAYKDFGYKPTTDLAAGLRKFVKWY 446
Y N +F ++P GL++ V+WY
Sbjct: 280 YA-INAEKMKNEFDWEPKYTFEQGLQETVQWY 310
>RGD|621493 [details] [associations]
symbol:Gale "UDP-galactose-4-epimerase" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IEA;ISO]
[GO:0006012 "galactose metabolic process" evidence=IEA;ISO]
[GO:0019388 "galactose catabolic process" evidence=ISO] [GO:0042803
"protein homodimerization activity" evidence=ISO] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214
InterPro:IPR016040 RGD:621493 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087 GO:GO:0003978
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 GO:GO:0019388 HOVERGEN:HBG001396
OrthoDB:EOG4B5P5D EMBL:X53949 IPI:IPI00193573 PIR:S11223
UniGene:Rn.29908 ProteinModelPortal:P18645 SMR:P18645 STRING:P18645
PRIDE:P18645 InParanoid:P18645 ArrayExpress:P18645
Genevestigator:P18645 GermOnline:ENSRNOG00000009712 Uniprot:P18645
Length = 347
Score = 233 (87.1 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 102/353 (28%), Positives = 159/353 (45%)
Query: 121 VLVTGAAGFVGSHCSLALKKRGDGVLGLDNF-NSYYD----P-SLKRARQKLLQKHQVFI 174
VLVTG AG++GSH L L + G + +DNF NS P SL+R ++ L V
Sbjct: 5 VLVTGGAGYIGSHTVLELLEAGYSPVVIDNFHNSIRGEDSMPESLRRVQE--LTGRSVEF 62
Query: 175 VEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSV 234
E D+ D L LF F V+H A V ++Q P Y N+ G + LLE+ +++
Sbjct: 63 EEMDILDQAALQHLFKKHNFKAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMRAM 122
Query: 235 NPQPSIVWASSSSVYGLNTQVPFS---ESHR-TDQPASLYAATKKAGEEIAHTY---NHI 287
+ S+V++SS++VYG VP S HR +P Y +K EE+ +
Sbjct: 123 GVK-SLVFSSSATVYG--KPVPASGRGPPHRGCTKP---YGKSKFFIEEMIQDLCRADTA 176
Query: 288 YGLALTGLRFFTVYG----------PWGRPDMAYFFFTKDIL-QGKTIDV----YKTQDD 332
+ L LR+F G P G P+ + ++ + + + ++V Y T+D
Sbjct: 177 WNAVL--LRYFIPIGAHRSARIGEDPQGIPNNLMPYVSQVAIGRREALNVFGDDYATEDG 234
Query: 333 REVARDFTYIDDVVKGCVGALDTAXXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSIL 392
V RD+ ++ D+ KG + AL R+YNLG + V ++V +
Sbjct: 235 TGV-RDYIHVVDLAKGHIAALKKLKEQ----------CGCRIYNLGTGTGYSVLQMVQAM 283
Query: 393 ENLLNTKAKKHVIRMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKW 445
E K V+ R GDV +AN SLA+++ G+ L +W
Sbjct: 284 EKASGKKIPYKVVAR-REGDVAACYANPSLAHEELGWTAALGLDRMCEDLWRW 335
>TAIR|locus:2123466 [details] [associations]
symbol:UGE5 "UDP-D-glucose/UDP-D-galactose 4-epimerase 5"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IDA] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IPI]
InterPro:IPR001509 InterPro:IPR005886 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214 InterPro:IPR016040
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006950 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
EMBL:AL161518 ProtClustDB:PLN02240 EMBL:AF080118 EMBL:AL049525
EMBL:AY065354 EMBL:AY117180 EMBL:AY140073 EMBL:AY085528
IPI:IPI00540537 PIR:T01881 PIR:T04291 RefSeq:NP_192834.1
UniGene:At.48845 ProteinModelPortal:Q9SN58 SMR:Q9SN58 IntAct:Q9SN58
STRING:Q9SN58 PaxDb:Q9SN58 PRIDE:Q9SN58 EnsemblPlants:AT4G10960.1
GeneID:826696 KEGG:ath:AT4G10960 TAIR:At4g10960 InParanoid:Q9SN58
OMA:ADKAWNA PhylomeDB:Q9SN58 Genevestigator:Q9SN58 Uniprot:Q9SN58
Length = 351
Score = 230 (86.0 bits), Expect = 4.7e-17, P = 4.7e-17
Identities = 95/344 (27%), Positives = 147/344 (42%)
Query: 121 VLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKH--QVFIVEGD 178
VLV+G AG++GSH L L G V+ +DN ++ SL+R + KL +H ++ + D
Sbjct: 6 VLVSGGAGYIGSHTVLQLLLGGYSVVVVDNLDNSSAVSLQRVK-KLAAEHGERLSFHQVD 64
Query: 179 LNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQP 238
L D L K+F F V+H A V +++ P Y +N+ G + LLEV +
Sbjct: 65 LRDRSALEKIFSETKFDAVIHFAGLKAVGESVEKPLLYYNNNLVGTITLLEVMAQHGCK- 123
Query: 239 SIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAH-TYNHIYGLALTGLRF 297
++V++SS++VYG +VP +E + Y TK EEI Y + LR+
Sbjct: 124 NLVFSSSATVYGSPKEVPCTEEFPISA-LNPYGRTKLFIEEICRDVYGSDPEWKIILLRY 182
Query: 298 FTVYG----------PWGRPDMAYFFFTKDILQGK----TI--DVYKTQDDREVARDFTY 341
F G P G P+ F + + G+ T+ + Y T+D V RD+ +
Sbjct: 183 FNPVGAHPSGDIGEDPRGIPNNL-MPFVQQVAVGRRPHLTVFGNDYNTKDGTGV-RDYIH 240
Query: 342 IDDVVKGCVGALDTAXXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAK 401
+ D+ G + AL VYNLG + V +V E K
Sbjct: 241 VIDLADGHIAALRKLEDCKIG---------CEVYNLGTGNGTSVLEMVDAFEKASGKKIP 291
Query: 402 KHVIRMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKW 445
VI R GD +A+ A + +K + R W
Sbjct: 292 L-VIAGRRPGDAEVVYASTERAESELNWKAKYGIEEMCRDLWNW 334
>TIGR_CMR|GSU_1975 [details] [associations]
symbol:GSU_1975 "NAD-dependent epimerase/dehydratase
family protein" species:243231 "Geobacter sulfurreducens PCA"
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016829 "lyase activity" evidence=ISS] [GO:0016857 "racemase
and epimerase activity, acting on carbohydrates and derivatives"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE017180 GenomeReviews:AE017180_GR
HOGENOM:HOG000167994 GO:GO:0008460 PANTHER:PTHR10366:SF41
HSSP:P95780 ProtClustDB:CLSK864552 RefSeq:NP_953024.1
ProteinModelPortal:Q74BR6 GeneID:2685764 KEGG:gsu:GSU1975
PATRIC:22026813 OMA:AMKGCDV BioCyc:GSUL243231:GH27-1926-MONOMER
InterPro:IPR026390 TIGRFAMs:TIGR04180 Uniprot:Q74BR6
Length = 336
Score = 227 (85.0 bits), Expect = 7.2e-17, P = 7.2e-17
Identities = 72/242 (29%), Positives = 113/242 (46%)
Query: 118 GMTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPS-LKRARQKLLQKHQVFIVE 176
G +LVTGA GF+GSH + AL RG +NS+ L +LL+ VF
Sbjct: 5 GKKILVTGADGFIGSHLTEALLMRGYDTRAFVYYNSFNSWGWLDHLDPELLKSLDVFA-- 62
Query: 177 GDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNP 236
GD+ D + + VLHLAA + Y+ +P +YV +N+ G +N+++ + +
Sbjct: 63 GDIRDPHGVREAMKGCDV--VLHLAALIAIPYSYHSPDTYVDTNVKGTLNVVQAARELGV 120
Query: 237 QPSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLR 296
+V S+S VYG VP +E H Q S Y+A+K ++IA ++ + + +R
Sbjct: 121 A-KVVHTSTSEVYGTARFVPITEEHPL-QGQSPYSASKIGADQIAMSFYSSFDTPVAIIR 178
Query: 297 FFTVYGPWGRPDMAYFFFT--KDILQG-KTIDVYKTQDDREVARDFTYIDDVVKGCVGAL 353
F YGP R F T I G +T+ + RD Y+ D V G +
Sbjct: 179 PFNTYGP--RQSARAFIPTVITQIASGARTLRLGALHP----TRDLNYVADTVAGFIAVA 232
Query: 354 DT 355
++
Sbjct: 233 ES 234
>TAIR|locus:2015253 [details] [associations]
symbol:UGE3 "UDP-D-glucose/UDP-D-galactose 4-epimerase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IPI] [GO:0009555 "pollen development" evidence=IMP]
InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 EMBL:CP002684 GO:GO:0009555 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 HSSP:Q14376
ProtClustDB:PLN02240 EMBL:AY085887 EMBL:BT024882 EMBL:AK117913
IPI:IPI00534992 RefSeq:NP_564811.1 UniGene:At.36168
ProteinModelPortal:Q8LDN8 SMR:Q8LDN8 STRING:Q8LDN8 PRIDE:Q8LDN8
EnsemblPlants:AT1G63180.1 GeneID:842622 KEGG:ath:AT1G63180
TAIR:At1g63180 InParanoid:Q8LDN8 OMA:FWADASL PhylomeDB:Q8LDN8
Genevestigator:Q8LDN8 Uniprot:Q8LDN8
Length = 351
Score = 228 (85.3 bits), Expect = 8.1e-17, P = 8.1e-17
Identities = 98/336 (29%), Positives = 148/336 (44%)
Query: 121 VLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKL---LQKHQVFIVEG 177
+LVTG AGF+G+H + L +G V +DN ++ ++ R R+ + L F + G
Sbjct: 9 ILVTGGAGFIGTHTVVQLLNQGFKVTIIDNLDNSVVEAVHRVRELVGPDLSTKLEFNL-G 67
Query: 178 DLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQ 237
DL + + KLF F V+H A V ++ NP+ Y +N+ G +NL E N +
Sbjct: 68 DLRNKGDIEKLFSNQRFDAVIHFAGLKAVGESVGNPRRYFDNNLVGTINLYETMAKYNCK 127
Query: 238 PSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIA---HTYNHIYGLALTG 294
+V++SS++VYG VP E Q + Y TK EEIA H + + L
Sbjct: 128 -MMVFSSSATVYGQPEIVPCVEDFEL-QAMNPYGRTKLFLEEIARDIHAAEPEWKIIL-- 183
Query: 295 LRFFTVYG----------PWGRPD--MAYFFFTKDILQGKTIDV------YKTQDDREVA 336
LR+F G P G P+ M Y + + G+ ++ Y T D V
Sbjct: 184 LRYFNPVGAHESGRIGEDPKGIPNNLMPYI---QQVAVGRLPELNVFGHDYPTMDGSAV- 239
Query: 337 RDFTYIDDVVKGCVGALDTAXXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILENLL 396
RD+ ++ D+ G V AL+ YNLG V +VS E
Sbjct: 240 RDYIHVMDLADGHVAALNKLFSDSKIGCTA--------YNLGTGQGTSVLEMVSSFEK-- 289
Query: 397 NTKAKKHVIRM-PRN-GDVPYTHANVSLAYKDFGYK 430
KK I++ PR GD +A+ A K+ G+K
Sbjct: 290 -ASGKKIPIKLCPRRAGDATAVYASTQKAEKELGWK 324
>TAIR|locus:2204639 [details] [associations]
symbol:MUR4 "MURUS 4" species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA;ISS] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=ISM;IDA] [GO:0006012 "galactose metabolic process"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=ISS] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0019567 "arabinose biosynthetic process" evidence=IMP]
[GO:0050373 "UDP-arabinose 4-epimerase activity" evidence=IDA]
[GO:0009723 "response to ethylene stimulus" evidence=RCA]
[GO:0009738 "abscisic acid mediated signaling pathway"
evidence=RCA] [GO:0035556 "intracellular signal transduction"
evidence=RCA] [GO:0052542 "defense response by callose deposition"
evidence=RCA] [GO:0009832 "plant-type cell wall biogenesis"
evidence=IMP] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
UniPathway:UPA00797 UniPathway:UPA00963 InterPro:IPR016040
GO:GO:0016021 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005794
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0032580
GO:GO:0045227 GO:GO:0009832 EMBL:AY195742 EMBL:AF083751
EMBL:AC007060 EMBL:AY064973 EMBL:BT002614 EMBL:AF325108
EMBL:AK220800 IPI:IPI00521995 PIR:E86431 RefSeq:NP_001031118.1
RefSeq:NP_174350.2 UniGene:At.20201 ProteinModelPortal:Q9SA77
SMR:Q9SA77 STRING:Q9SA77 PaxDb:Q9SA77 PRIDE:Q9SA77
EnsemblPlants:AT1G30620.1 EnsemblPlants:AT1G30620.2 GeneID:839942
KEGG:ath:AT1G30620 TAIR:At1g30620 eggNOG:COG1087
HOGENOM:HOG000168001 InParanoid:Q9SA77 KO:K12448 OMA:SHPNGYN
PhylomeDB:Q9SA77 ProtClustDB:CLSN2686084
BioCyc:MetaCyc:AT1G30620-MONOMER Genevestigator:Q9SA77
GermOnline:AT1G30620 GO:GO:0050373 GO:GO:0003978 GO:GO:0019567
GO:GO:0006012 GO:GO:0033358 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
Uniprot:Q9SA77
Length = 419
Score = 230 (86.0 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 105/383 (27%), Positives = 169/383 (44%)
Query: 110 SATPRRPNGMT-VLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLL- 167
S R G+T VLVTG AG++GSH +L L K V +DN S + + R Q+L
Sbjct: 61 SVFSRHEPGVTHVLVTGGAGYIGSHAALRLLKESYRVTIVDNL-SRGNLAAVRILQELFP 119
Query: 168 QKHQVFIVEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNL 227
+ ++ + DL DA + K+F F V+H AA A V + Q P Y + + + +
Sbjct: 120 EPGRLQFIYADLGDAKAVNKIFTENAFDAVMHFAAVAYVGESTQFPLKYYHNITSNTLVV 179
Query: 228 LEVCKSVNPQPSIVWASSSSVYGLNTQVPFSESHRTDQ-PASLYAATKKAGEEIAHTYNH 286
LE + + +++++S+ + YG +P +E T Q P + Y KK E+I ++
Sbjct: 180 LETM-AAHGVKTLIYSSTCATYGEPDIMPITEE--TPQVPINPYGKAKKMAEDIILDFSK 236
Query: 287 IYGLALTGLRFFTVYG--PWGR------PDM--------AYFFFTKDILQGKTIDV--YK 328
+A+ LR+F V G P GR P++ A F + I+ G I YK
Sbjct: 237 NSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIMPGLQIKGTDYK 296
Query: 329 TQDDREVARDFTYIDDVVKGCVGALDTAXXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRL 388
T D V RD+ + D+V V AL A P ++ +YN+G V
Sbjct: 297 TADGTCV-RDYIDVTDLVDAHVKALQKAK-----------PRKVGIYNVGTGKGSSVKEF 344
Query: 389 VSILENLLNTKAKKHVIRMPRN-GDVPYTHANVSLAYKDFGYKPT-TDLAAGLRKFVKWY 446
V + + K + +PR GD +++ S K+ + T+L L +W
Sbjct: 345 VEACKKATGVEIK--IDYLPRRAGDYAEVYSDPSKIRKELNWTAKHTNLKESLETAWRWQ 402
Query: 447 VSYYGIQPRVKKENGFSTTTSTI 469
+ NG+ TTS++
Sbjct: 403 KLH---------RNGYGLTTSSV 416
>TAIR|locus:2099372 [details] [associations]
symbol:RHM3 "rhamnose biosynthesis 3" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=ISS] [GO:0009507 "chloroplast" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0010280
"UDP-L-rhamnose synthase activity" evidence=ISS;IDA] [GO:0010253
"UDP-rhamnose biosynthetic process" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR001509 InterPro:IPR005913 Pfam:PF01370 Pfam:PF04321
InterPro:IPR016040 GO:GO:0005829 GO:GO:0009506 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0016829 EMBL:AP002061 GO:GO:0008831
GO:GO:0045226 HOGENOM:HOG000167988 KO:K12450 ProtClustDB:PLN02260
GO:GO:0010280 GO:GO:0010253 eggNOG:COG1088 EMBL:AY078958
EMBL:AY142060 IPI:IPI00525100 RefSeq:NP_188097.1 UniGene:At.27812
ProteinModelPortal:Q9LH76 SMR:Q9LH76 IntAct:Q9LH76 STRING:Q9LH76
PaxDb:Q9LH76 PRIDE:Q9LH76 EnsemblPlants:AT3G14790.1 GeneID:820707
KEGG:ath:AT3G14790 TAIR:At3g14790 InParanoid:Q9LH76 OMA:TARMNNI
PhylomeDB:Q9LH76 Genevestigator:Q9LH76 GermOnline:AT3G14790
Uniprot:Q9LH76
Length = 664
Score = 231 (86.4 bits), Expect = 3.2e-16, P = 3.2e-16
Identities = 91/333 (27%), Positives = 136/333 (40%)
Query: 121 VLVTGAAGFVGSHCSLAL-KKRGD-GVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGD 178
+L+TGAAGF+ SH + L + D ++ LD + Y +LK + F V+GD
Sbjct: 9 ILITGAAGFIASHVANRLVRSYPDYKIVVLDKLD--YCSNLKNLNPSKSSPNFKF-VKGD 65
Query: 179 LNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQP 238
+ A L+ L ++H AAQ V + N + +NI G LLE CK
Sbjct: 66 IASADLVNYLLITEEIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIR 125
Query: 239 SIVWASSSSVYGLNTQVPFSESHRTDQ--PASLYAATKKAGEEIAHTYNHIYGLALTGLR 296
+ S+ VYG + +H Q P + Y+ATK E + Y YGL + R
Sbjct: 126 RFIHVSTDEVYGETDEDASVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTR 185
Query: 297 FFTVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGALDTA 356
VYGP P+ F + GK + ++ D R + Y +DV + L
Sbjct: 186 GNNVYGPNQFPEKLIPKFILLAMNGKPLPIH---GDGSNVRSYLYCEDVAEAFEVVLHKG 242
Query: 357 XXXXXXXXXXXXPAQLRVYNLGNTSP---VPVGRLVSILENLLNTKAKKHVIRMPRNGDV 413
VYN+G T + V +S L + ++V P N D
Sbjct: 243 EVN-------------HVYNIGTTRERRVIDVANDISKLFGIDPDSTIQYVENRPFN-DQ 288
Query: 414 PYTHANVSLAYKDFGYKPTTDLAAGLRKFVKWY 446
Y + L K G+ T+ GLRK ++WY
Sbjct: 289 RYFLDDQKL--KKLGWCERTNWEEGLRKTMEWY 319
>TIGR_CMR|CJE_1287 [details] [associations]
symbol:CJE_1287 "ADP-L-glycero-D-mannoheptose-6-epimerase"
species:195099 "Campylobacter jejuni RM1221" [GO:0008712
"ADP-glyceromanno-heptose 6-epimerase activity" evidence=ISS]
[GO:0009244 "lipopolysaccharide core region biosynthetic process"
evidence=ISS] UniPathway:UPA00356 InterPro:IPR001509
InterPro:IPR011912 Pfam:PF01370 InterPro:IPR016040 eggNOG:COG0451
Gene3D:3.40.50.720 GO:GO:0005975 GO:GO:0050661 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0097171 HOGENOM:HOG000167987
KO:K03274 GO:GO:0008712 PANTHER:PTHR10366:SF29 TIGRFAMs:TIGR02197
RefSeq:YP_179275.1 ProteinModelPortal:Q5HTW0 STRING:Q5HTW0
GeneID:3231794 KEGG:cjr:CJE1287 PATRIC:20044370 OMA:GSYQFHT
ProtClustDB:CLSK871664 BioCyc:CJEJ195099:GJC0-1313-MONOMER
Uniprot:Q5HTW0
Length = 317
Score = 219 (82.2 bits), Expect = 3.9e-16, P = 3.9e-16
Identities = 74/246 (30%), Positives = 127/246 (51%)
Query: 119 MTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNS---YYDPSLKR-ARQKLLQKHQVFI 174
M V +TG AGF+GS +L L+++ + +L +D S + + +L+ K L + +
Sbjct: 1 MRVAITGGAGFIGSQLALNLQEKHE-ILIIDKMRSSATFENGNLQSFGHFKNLLEFDGEL 59
Query: 175 VEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSV 234
GD+ND +L K+ D P + H AA + Q + +N+ F + +E+ S+
Sbjct: 60 FAGDINDEKVLKKIEDFKPEI-IFHQAAISDTTVFDQT--KVLQTNLNTFKDFIEL--SI 114
Query: 235 NPQPSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLA-LT 293
+ +++ASS+SVYG + + P + + ++P + YA +K +++A Y Y A L
Sbjct: 115 DLNAKLIYASSASVYG-DAKSPQTVG-KDEEPKNPYAFSKLMMDKLAKKY---YDKAHLV 169
Query: 294 GLRFFTVYGPW----GRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGC 349
GLR+F VYG + F IL GK +++ D ++ RDFTYI DV+
Sbjct: 170 GLRYFNVYGKGEFYKNKTASMVLQFGHQILAGKNPRLFEGSD--QIYRDFTYIKDVINAN 227
Query: 350 VGALDT 355
+ ALD+
Sbjct: 228 LIALDS 233
>FB|FBgn0035147 [details] [associations]
symbol:Gale "UDP-galactose 4'-epimerase" species:7227
"Drosophila melanogaster" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS;IMP;NAS] [GO:0006012 "galactose metabolic
process" evidence=IMP;NAS] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
UniPathway:UPA00214 InterPro:IPR016040 EMBL:AE014296 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087
GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
GeneTree:ENSGT00530000063128 OMA:ADKAWNA EMBL:AY058582
RefSeq:NP_001246537.1 RefSeq:NP_612044.1 UniGene:Dm.4155
ProteinModelPortal:Q9W0P5 SMR:Q9W0P5 DIP:DIP-20343N IntAct:Q9W0P5
MINT:MINT-914196 STRING:Q9W0P5 PaxDb:Q9W0P5 PRIDE:Q9W0P5
EnsemblMetazoa:FBtr0072556 EnsemblMetazoa:FBtr0306917 GeneID:38076
KEGG:dme:Dmel_CG12030 UCSC:CG12030-RA CTD:2582 FlyBase:FBgn0035147
InParanoid:Q9W0P5 OrthoDB:EOG473N6Z PhylomeDB:Q9W0P5
GenomeRNAi:38076 NextBio:806870 Bgee:Q9W0P5 GermOnline:CG12030
Uniprot:Q9W0P5
Length = 350
Score = 222 (83.2 bits), Expect = 4.5e-16, P = 4.5e-16
Identities = 94/332 (28%), Positives = 138/332 (41%)
Query: 120 TVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKR----ARQKLLQKHQVFIV 175
TVLVTG AG++GSH L + G V+ +DN + Y K +R + + +V
Sbjct: 5 TVLVTGGAGYIGSHTVLEMLNAGYNVICVDNLCNAYSSGAKLPEALSRVQEITGKKVNFY 64
Query: 176 EGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVN 235
D+ D + +F V H AA V + + P Y +N+ G LLE N
Sbjct: 65 RVDITDREQVRSVFQEHKIDMVAHFAALKAVGESCRIPLQYYHNNMTGTNVLLEAMADNN 124
Query: 236 PQPSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTY-NHIYGLALTG 294
V++SS++VYG +P +E H T S Y TK EEI A+
Sbjct: 125 VF-KFVYSSSATVYGEPKFLPVTEEHPTGNCTSPYGKTKYFTEEILKDLCKSDKRWAVVS 183
Query: 295 LRFFTVYG----------PWGRPDMAYFFFTKDILQGK--TIDVY----KTQDDREVARD 338
LR+F G P G P+ + + + G+ ++ VY T D V RD
Sbjct: 184 LRYFNPVGAHISGRIGEDPNGEPNNLMPYIAQ-VAVGRRPSLSVYGSDFPTHDGTGV-RD 241
Query: 339 FTYIDDVVKGCVGALDTAXXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILENLLNT 398
+ +I D+ +G V ALD YNLG V +V E
Sbjct: 242 YIHIVDLAEGHVKALDKLRNIAETGFFA--------YNLGTGVGYSVLDMVKAFEKASGK 293
Query: 399 KAKKHVIRMPRNGDVPYTHANVSLAYKDFGYK 430
K ++ R+GDV +A+ +LA K G+K
Sbjct: 294 KVNYTLVDR-RSGDVATCYADATLADKKLGWK 324
>TAIR|locus:2163401 [details] [associations]
symbol:DUR "DEFECTIVE UGE IN ROOT" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0006012 "galactose
metabolic process" evidence=IEA] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=ISS] [GO:0044237 "cellular metabolic
process" evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
UniPathway:UPA00797 UniPathway:UPA00963 InterPro:IPR016040
GO:GO:0016021 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0032580 GO:GO:0045227
eggNOG:COG1087 HOGENOM:HOG000168001 KO:K12448
ProtClustDB:CLSN2686084 GO:GO:0050373 GO:GO:0003978 GO:GO:0006012
GO:GO:0033358 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 EMBL:AB017065 IPI:IPI00546765
RefSeq:NP_199261.1 UniGene:At.55356 ProteinModelPortal:Q9FI17
SMR:Q9FI17 STRING:Q9FI17 PaxDb:Q9FI17 PRIDE:Q9FI17
EnsemblPlants:AT5G44480.1 GeneID:834475 KEGG:ath:AT5G44480
TAIR:At5g44480 InParanoid:Q9FI17 OMA:VRWGPLE PhylomeDB:Q9FI17
Genevestigator:Q9FI17 GermOnline:AT5G44480 Uniprot:Q9FI17
Length = 436
Score = 223 (83.6 bits), Expect = 9.4e-16, P = 9.4e-16
Identities = 94/358 (26%), Positives = 159/358 (44%)
Query: 110 SATPRRPNGMT-VLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQ 168
SA +R G+T VLVTG AG++GSH +L L + V +DN + ++K +Q Q
Sbjct: 85 SAFSQREEGVTHVLVTGGAGYIGSHAALRLLRDSYRVTIVDNLSRGNLGAVKTLQQLFPQ 144
Query: 169 KHQVFIVEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLL 228
++ + DL D + K+F F V+H AA A V + P Y + + + +L
Sbjct: 145 TGRLQFIYADLGDPLAVEKIFSENAFDAVMHFAAVAYVGESTLYPLKYYHNITSNTLGVL 204
Query: 229 EVCKSVNPQPSIVWASSSSVYGLNTQVPFSESHRTDQ-PASLYAATKKAGEEIAHTYNHI 287
E + ++++S+ + YG ++P +E T Q P + Y KK E++ ++
Sbjct: 205 EAMAR-HKVKKLIYSSTCATYGEPEKMPITED--TPQVPINPYGKAKKMAEDMILDFSKN 261
Query: 288 YGLALTGLRFFTVYG--PWGR------PDM--------AYFFFTKDILQGKTIDV--YKT 329
+A+ LR+F V G P GR P++ A F + + G + YKT
Sbjct: 262 SDMAVMILRYFNVIGSDPGGRLGEAPRPELREQGRISGACFDAARGFIPGLQVKGTDYKT 321
Query: 330 QDDREVARDFTYIDDVVKGCVGALDTAXXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLV 389
D + RD+ + D+V V AL+ A P ++ +YN+G V V
Sbjct: 322 SDGTCI-RDYIDVTDLVDAHVKALEKAQ-----------PRKVGIYNVGTGKGRSVKEFV 369
Query: 390 SILENLLNTKAKKHVIRMPRN-GDVPYTHANVSLAYKDFGYKPT-TDLAAGLRKFVKW 445
+ + K V +PR GD +++ + KD + T+L L+ +W
Sbjct: 370 EACKKATGVEIK--VDFLPRRPGDYAEVYSDPTKILKDLNWTARFTNLQDSLQVAWRW 425
>CGD|CAL0000448 [details] [associations]
symbol:GAL10 species:5476 "Candida albicans" [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=IGI] [GO:0019388
"galactose catabolic process" evidence=IEP;IGI;IMP] [GO:0001403
"invasive growth in response to glucose limitation" evidence=IMP]
[GO:0009272 "fungal-type cell wall biogenesis" evidence=IMP]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0034599
"cellular response to oxidative stress" evidence=IMP] [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0042149 "cellular response to glucose starvation" evidence=IMP]
[GO:0044182 "filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0060257 "negative regulation of
flocculation" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:0033499 "galactose catabolic process via
UDP-galactose" evidence=IEA] [GO:0042125 "protein galactosylation"
evidence=IEA] [GO:0004034 "aldose 1-epimerase activity"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008183 InterPro:IPR011013 InterPro:IPR014718
Pfam:PF01263 Pfam:PF01370 InterPro:IPR016040 CGD:CAL0000448
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0034599
GO:GO:0030246 GO:GO:0042149 GO:GO:0009272 GO:GO:0044237
SUPFAM:SSF74650 GO:GO:0001403 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:AACQ01000118 EMBL:AACQ01000119 Gene3D:2.70.98.10 GO:GO:0019388
GO:GO:0060257 GO:GO:1900429 eggNOG:COG2017 KO:K15917
RefSeq:XP_713732.1 RefSeq:XP_713766.1 ProteinModelPortal:Q59VY6
SMR:Q59VY6 STRING:Q59VY6 GeneID:3644583 GeneID:3644609
KEGG:cal:CaO19.11156 KEGG:cal:CaO19.3672 Uniprot:Q59VY6
Length = 675
Score = 226 (84.6 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 67/190 (35%), Positives = 98/190 (51%)
Query: 121 VLVTGAAGFVGSHCSLALKKRGDGVLGLDNF-NSYYDPSLKRARQKLLQKHQVFIVEGDL 179
+LVTG AG++GSH + L G V+ +DN NS YD AR + + K V + D+
Sbjct: 6 ILVTGGAGYIGSHTVIELISNGYKVVIVDNLSNSSYDAV---ARIEFIVKQHVPFYDVDI 62
Query: 180 NDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQPS 239
+ L K+F + V+H AA V + + P +Y +N++G VNLLEVCK+ N +
Sbjct: 63 RNYEQLNKVFQDYKISGVIHFAALKAVGESTKIPLAYYDNNVSGTVNLLEVCKA-NDVKT 121
Query: 240 IVWASSSSVYGL------NTQVPFSESHRTDQPASLYAATKKAGEEIAHT-YNHIYGLAL 292
IV++SS++VYG N+ +P E H P + Y TK E I YN +
Sbjct: 122 IVFSSSATVYGDVTRFGDNSMIPIPE-HCPMDPTNPYGRTKFIIESILKDIYNSDDAWKV 180
Query: 293 TGLRFFTVYG 302
LR+F G
Sbjct: 181 AILRYFNPIG 190
>UNIPROTKB|Q59VY6 [details] [associations]
symbol:GAL10 "Putative uncharacterized protein GAL10"
species:237561 "Candida albicans SC5314" [GO:0001403 "invasive
growth in response to glucose limitation" evidence=IMP] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=IGI] [GO:0009272
"fungal-type cell wall biogenesis" evidence=IMP] [GO:0019388
"galactose catabolic process" evidence=IGI;IMP] [GO:0030447
"filamentous growth" evidence=IMP] [GO:0034599 "cellular response
to oxidative stress" evidence=IMP] [GO:0042149 "cellular response
to glucose starvation" evidence=IMP] [GO:0044182 "filamentous
growth of a population of unicellular organisms" evidence=IMP]
[GO:0060257 "negative regulation of flocculation" evidence=IMP]
[GO:1900429 "negative regulation of filamentous growth of a
population of unicellular organisms" evidence=IMP]
InterPro:IPR001509 InterPro:IPR005886 InterPro:IPR008183
InterPro:IPR011013 InterPro:IPR014718 Pfam:PF01263 Pfam:PF01370
InterPro:IPR016040 CGD:CAL0000448 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0034599 GO:GO:0030246 GO:GO:0042149
GO:GO:0009272 GO:GO:0044237 SUPFAM:SSF74650 GO:GO:0001403
GO:GO:0003978 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 EMBL:AACQ01000118 EMBL:AACQ01000119
Gene3D:2.70.98.10 GO:GO:0019388 GO:GO:0060257 GO:GO:1900429
eggNOG:COG2017 KO:K15917 RefSeq:XP_713732.1 RefSeq:XP_713766.1
ProteinModelPortal:Q59VY6 SMR:Q59VY6 STRING:Q59VY6 GeneID:3644583
GeneID:3644609 KEGG:cal:CaO19.11156 KEGG:cal:CaO19.3672
Uniprot:Q59VY6
Length = 675
Score = 226 (84.6 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 67/190 (35%), Positives = 98/190 (51%)
Query: 121 VLVTGAAGFVGSHCSLALKKRGDGVLGLDNF-NSYYDPSLKRARQKLLQKHQVFIVEGDL 179
+LVTG AG++GSH + L G V+ +DN NS YD AR + + K V + D+
Sbjct: 6 ILVTGGAGYIGSHTVIELISNGYKVVIVDNLSNSSYDAV---ARIEFIVKQHVPFYDVDI 62
Query: 180 NDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQPS 239
+ L K+F + V+H AA V + + P +Y +N++G VNLLEVCK+ N +
Sbjct: 63 RNYEQLNKVFQDYKISGVIHFAALKAVGESTKIPLAYYDNNVSGTVNLLEVCKA-NDVKT 121
Query: 240 IVWASSSSVYGL------NTQVPFSESHRTDQPASLYAATKKAGEEIAHT-YNHIYGLAL 292
IV++SS++VYG N+ +P E H P + Y TK E I YN +
Sbjct: 122 IVFSSSATVYGDVTRFGDNSMIPIPE-HCPMDPTNPYGRTKFIIESILKDIYNSDDAWKV 180
Query: 293 TGLRFFTVYG 302
LR+F G
Sbjct: 181 AILRYFNPIG 190
>TIGR_CMR|CHY_0979 [details] [associations]
symbol:CHY_0979 "dTDP-glucose 4,6-dehydratase"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=ISS]
[GO:0019305 "dTDP-rhamnose biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0009225 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 RefSeq:YP_359826.1 ProteinModelPortal:Q3ADF8
SMR:Q3ADF8 STRING:Q3ADF8 GeneID:3726804 KEGG:chy:CHY_0979
PATRIC:21275091 OMA:AEFRPEA ProtClustDB:CLSK2310403
BioCyc:CHYD246194:GJCN-978-MONOMER Uniprot:Q3ADF8
Length = 309
Score = 213 (80.0 bits), Expect = 1.8e-15, P = 1.8e-15
Identities = 82/335 (24%), Positives = 143/335 (42%)
Query: 119 MTVLVTGAAGFVGSHCSLALKKRGDGVLGL-DNFNSYYDPSLKRARQKLLQKHQVFIVEG 177
M +LVTG AGF+GS + K D L + D Y L+R + + ++ +
Sbjct: 1 MKILVTGGAGFIGS--AFVRKYAYDHELIIVDKLT--YAGDLRRIEEV---RDRIKFYKA 53
Query: 178 DLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQ 237
D+ D + ++FD V+H AA++ V ++Q+P ++ +N+ G +L+ + +
Sbjct: 54 DVADKTAIEEIFDKEKPEAVVHFAAESHVDRSIQDPTPFIETNVKGTQVMLDASRKYGIE 113
Query: 238 PSIVWASSSSVYG-LNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLR 296
V S+ VYG L + F+E +P S Y+ +K A + +A Y+ YGL + R
Sbjct: 114 -KFVHISTDEVYGELGKEGQFTEESPL-RPNSPYSVSKAAADMLARAYHRTYGLPVIVAR 171
Query: 297 FFTVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGALDTA 356
YGPW P+ K L + I VY + R++ Y+DD C+ A+
Sbjct: 172 PCNNYGPWQYPEKLIPVVIKKALNNEPIPVYGQGLN---VREWLYVDD----CIEAV--- 221
Query: 357 XXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAKKHVIRMPRNG-DVPY 415
P + YN+G+ +V + +L R G D Y
Sbjct: 222 ----YLLLQKGKPGE--AYNIGSGEEKGNIEVVKEILRILGKPESLITFVEDRPGHDFRY 275
Query: 416 THANVSLAYKDFGYKPTTDLAAGLRKFVKWYVSYY 450
+ N ++ +K + G+R + WY ++
Sbjct: 276 S-LNSKKIKMNYAWKHKVNFNEGIRFVIDWYKKHF 309
>TAIR|locus:2202960 [details] [associations]
symbol:RHM1 "rhamnose biosynthesis 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=ISS] [GO:0009507 "chloroplast" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0010253
"UDP-rhamnose biosynthetic process" evidence=IDA;IMP] [GO:0050377
"UDP-glucose 4,6-dehydratase activity" evidence=IDA] [GO:0010280
"UDP-L-rhamnose synthase activity" evidence=IDA] [GO:0010315 "auxin
efflux" evidence=IMP] [GO:0051555 "flavonol biosynthetic process"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0009744 "response to sucrose
stimulus" evidence=RCA] [GO:0009813 "flavonoid biosynthetic
process" evidence=RCA] [GO:0010224 "response to UV-B" evidence=RCA]
InterPro:IPR001509 InterPro:IPR005888 InterPro:IPR005913
Pfam:PF01370 Pfam:PF04321 InterPro:IPR016040 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0009506 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0010315 EMBL:AC007260
GO:GO:0051555 eggNOG:COG1091 GO:GO:0008831 GO:GO:0045226
EMBL:AY042833 EMBL:AY081471 IPI:IPI00543019 PIR:C96814
RefSeq:NP_177978.1 UniGene:At.198 UniGene:At.71030
ProteinModelPortal:Q9SYM5 SMR:Q9SYM5 IntAct:Q9SYM5 STRING:Q9SYM5
PaxDb:Q9SYM5 PRIDE:Q9SYM5 EnsemblPlants:AT1G78570.1 GeneID:844193
KEGG:ath:AT1G78570 TAIR:At1g78570 HOGENOM:HOG000167988
InParanoid:Q9SYM5 KO:K12450 OMA:IKFVDNR PhylomeDB:Q9SYM5
ProtClustDB:PLN02260 BioCyc:ARA:AT1G78570-MONOMER
BioCyc:MetaCyc:AT1G78570-MONOMER Genevestigator:Q9SYM5
GO:GO:0008460 GO:GO:0050377 GO:GO:0010280 GO:GO:0010253
TIGRFAMs:TIGR01181 Uniprot:Q9SYM5
Length = 669
Score = 224 (83.9 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 89/333 (26%), Positives = 133/333 (39%)
Query: 121 VLVTGAAGFVGSHCSLAL-KKRGD-GVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGD 178
+L+TGAAGF+ SH + L + D ++ LD + Y +LK + F V+GD
Sbjct: 9 ILITGAAGFIASHVANRLIRSYPDYKIVVLDKLD--YCSNLKNLNPSKHSPNFKF-VKGD 65
Query: 179 LNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQP 238
+ A L+ L ++H AAQ V + N + +NI G LLE CK
Sbjct: 66 IASADLVNHLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIR 125
Query: 239 SIVWASSSSVYGLNTQVPFSESHRTDQ--PASLYAATKKAGEEIAHTYNHIYGLALTGLR 296
+ S+ VYG + +H Q P + Y+ATK E + Y YGL + R
Sbjct: 126 RFIHVSTDEVYGETDEDALVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTR 185
Query: 297 FFTVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGALDTA 356
VYGP P+ F ++G+ + ++ D R + Y +DV + L
Sbjct: 186 GNNVYGPNQFPEKLIPKFILLAMRGQVLPIH---GDGSNVRSYLYCEDVAEAFEVVLHKG 242
Query: 357 XXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAK---KHVIRMPRNGDV 413
VYN+G V + + L N + K V P N D
Sbjct: 243 EVG-------------HVYNIGTKKERRVNDVAKDICKLFNMDPEANIKFVDNRPFN-DQ 288
Query: 414 PYTHANVSLAYKDFGYKPTTDLAAGLRKFVKWY 446
Y + L K G+ T GL+K + WY
Sbjct: 289 RYFLDDQKL--KKLGWSERTTWEEGLKKTMDWY 319
>ZFIN|ZDB-GENE-030131-5718 [details] [associations]
symbol:tgds "TDP-glucose 4,6-dehydratase"
species:7955 "Danio rerio" [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040
ZFIN:ZDB-GENE-030131-5718 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009225 GO:GO:0008460 PANTHER:PTHR10366:SF41
HOVERGEN:HBG007741 HSSP:P26391 EMBL:BC066615 IPI:IPI00496965
UniGene:Dr.80538 ProteinModelPortal:Q6NYF5 Uniprot:Q6NYF5
Length = 347
Score = 216 (81.1 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 91/363 (25%), Positives = 144/363 (39%)
Query: 120 TVLVTGAAGFVGSH--CSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEG 177
TVLVTG AGF+GSH C+LA + ++ +DN Y +LK R FI G
Sbjct: 8 TVLVTGGAGFIGSHLICALAGRFPHWRIINVDNLQ--YCSNLKNLRSVQASSSYSFI-PG 64
Query: 178 DLNDAPLLTK-LFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNP 236
D+ D PL K LF V H AA+ V + P ++ N+ G L+ +
Sbjct: 65 DVCD-PLFIKHLFSTEHIDVVFHCAAETHVENSFVCPSRFMRVNVDGTAVLVRASLEASV 123
Query: 237 QPSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTY--NHIYGLALTG 294
Q ++ S+ VYG + PF E +P + Y+ +K A E I +Y H + +T
Sbjct: 124 Q-RFIYISTDEVYGDSVDQPFDELS-PKRPTNPYSRSKAAAESIVTSYWLKHKFPAVIT- 180
Query: 295 LRFFTVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGALD 354
R VYGP + F + Q + + Q +R F Y+ DV + ++
Sbjct: 181 -RSSNVYGPRQHHEKVIPRFLSLLQQQQKCTI---QGSGLQSRHFLYVSDVTDAFLTVME 236
Query: 355 TAXXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILENLL--NTKAKKHVIRMPRNGD 412
+YN+G +P+ +L L + + A+ + D
Sbjct: 237 KGILG-------------EIYNIGTGFEIPIIQLARELVQMTVKSVSAESLDDWLEFVED 283
Query: 413 VPYTHANV---SLAYKDFGYKPTTDLAAGLRKFVKWYVSYYGIQPRVKKENGFSTTTSTI 469
P T S+ G++P G+R+ V+WY P + + +
Sbjct: 284 RPVTELRYPMNSVKLHRLGWRPKVAWTEGIRRTVQWYEENPNYWPIISENQTNLESCDQT 343
Query: 470 QHP 472
HP
Sbjct: 344 PHP 346
>UNIPROTKB|F1RP60 [details] [associations]
symbol:TGDS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050662 "coenzyme binding" evidence=IEA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 KO:K01710
PANTHER:PTHR10366:SF41 OMA:GFIASHM EMBL:CU986273
RefSeq:XP_003131096.2 Ensembl:ENSSSCT00000010407 GeneID:100517301
KEGG:ssc:100517301 Uniprot:F1RP60
Length = 355
Score = 215 (80.7 bits), Expect = 3.4e-15, P = 3.4e-15
Identities = 87/343 (25%), Positives = 142/343 (41%)
Query: 116 PNGMT--VLVTGAAGFVGSHCSLALKKRGDG--VLGLDNFNSYYDPSLKRARQKLLQKHQ 171
PN VLVTG AGF+ SH ++L + ++ LD + Y SLK + + K
Sbjct: 13 PNSFAKRVLVTGGAGFIASHVIVSLVEDYPNYMIVNLDKLD--YCASLKNL-ETISDKQN 69
Query: 172 VFIVEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVC 231
++GD+ D+ + LF+ VLH AAQ V + + N+ G LL
Sbjct: 70 YKFIQGDICDSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLLSAA 129
Query: 232 KSVNPQPSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLA 291
+ ++ S+ VYG + F ES QP + YA++K A E +Y Y
Sbjct: 130 HEARVE-KFIYVSTDEVYGGSLDKEFDESS-PKQPTNPYASSKAAAECFVQSYWERYKFP 187
Query: 292 LTGLRFFTVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVG 351
+ R VYGP P+ F + + ++ + R+F Y DVV+ +
Sbjct: 188 VVITRSSNVYGPHQYPEKVIPKFISLLQHNRKCCIHGSGLQ---TRNFLYATDVVEAFLT 244
Query: 352 ALDTAXXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILENLLN-TKAKK-------H 403
L P + +YN+G + V +L L L+ TK++ +
Sbjct: 245 VLKKGK-----------PGE--IYNIGTNFEMSVLQLAKELIQLIKETKSESEMENWVDY 291
Query: 404 VIRMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKWY 446
V P N D+ Y + + G++P G++K ++WY
Sbjct: 292 VNDRPTN-DMRYPMKSEKI--HGLGWRPKVPWKEGIKKTIEWY 331
>POMBASE|SPBPB2B2.12c [details] [associations]
symbol:gal10 species:4896 "Schizosaccharomyces pombe"
[GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IDA]
[GO:0004034 "aldose 1-epimerase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0030246 "carbohydrate binding" evidence=IEA] [GO:0033499
"galactose catabolic process via UDP-galactose" evidence=ISS]
[GO:0033554 "cellular response to stress" evidence=IEP] [GO:0042125
"protein galactosylation" evidence=IMP] [GO:0050662 "coenzyme
binding" evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008183 InterPro:IPR011013 InterPro:IPR014718
Pfam:PF01263 Pfam:PF01370 UniPathway:UPA00214 UniPathway:UPA00242
InterPro:IPR016040 PomBase:SPBPB2B2.12c GO:GO:0005829 GO:GO:0005634
GO:GO:0033554 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0030246 EMBL:CU329671 GenomeReviews:CU329671_GR
SUPFAM:SSF74650 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
Gene3D:2.70.98.10 RefSeq:NP_596858.1 ProteinModelPortal:Q9HDU3
STRING:Q9HDU3 EnsemblFungi:SPBPB2B2.12c.1 GeneID:2541411
KEGG:spo:SPBPB2B2.12c eggNOG:COG2017 HOGENOM:HOG000247896 KO:K15917
OMA:CKDLWKW OrthoDB:EOG4NKG3T BRENDA:5.1.3.2 NextBio:20802517
GO:GO:0004034 GO:GO:0033499 GO:GO:0042125 InterPro:IPR018052
PROSITE:PS00545 Uniprot:Q9HDU3
Length = 713
Score = 222 (83.2 bits), Expect = 3.8e-15, P = 3.8e-15
Identities = 94/352 (26%), Positives = 147/352 (41%)
Query: 121 VLVTGAAGFVGSHCSLALKKRGDGVLGLDNF-NSYYDPSLKRARQKLLQKHQVFIVEGDL 179
+LVTG AG++GSH + L G V+ +DN NS YD AR + + + + + DL
Sbjct: 8 ILVTGGAGYIGSHTVIELINHGYKVIIVDNLCNSCYDAV---ARVEFIVRKSIKFFKLDL 64
Query: 180 NDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQPS 239
D L ++FD V+H AA V +M+ P Y +NI G + LL V + + +
Sbjct: 65 RDKEGLAQIFDTFKIKGVIHFAALKAVGESMKLPLEYYDNNICGTITLLNVMREHRVK-T 123
Query: 240 IVWASSSSVYG----LNTQVPFSESHRTDQPASLYAATKKAGEEIA---HTYNHIYGLAL 292
+V++SS++VYG + +P ES D P + Y TK A E I HT ++ + A+
Sbjct: 124 VVFSSSATVYGDATRFDNMIPIPESCPND-PTNPYGKTKYAIENIIKDLHTSDNTWRGAI 182
Query: 293 TGLRFFTVYG----------PWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYI 342
LR+F G P G P+ F + + G+ + DD + + D T I
Sbjct: 183 --LRYFNPIGAHPSGLLGEDPLGIPNNLLPFLAQ-VAIGRREKLLVFGDDYD-SHDGTPI 238
Query: 343 DDVVKGCVGALDTAXXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAKK 402
D + A R +NLG V + +
Sbjct: 239 RDYIHVVDLAKGHIAALNYLNKINNSEGMYREWNLGTGKGSSVFDIYHAFCKEVGKDLPY 298
Query: 403 HVIRMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKWYVSY-YGIQ 453
V+ R GDV A+ + A + +K + R KW + +G Q
Sbjct: 299 EVVGR-RTGDVLNLTASPNRANSELKWKAELSITDACRDLWKWTIENPFGFQ 349
>UNIPROTKB|Q5QPP1 [details] [associations]
symbol:GALE "UDP-glucose 4-epimerase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IEA] [GO:0006012 "galactose metabolic process"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
PANTHER:PTHR10366:SF39 EMBL:AL031295 UniGene:Hs.632380
HGNC:HGNC:4116 HOVERGEN:HBG001396 IPI:IPI00641123 SMR:Q5QPP1
Ensembl:ENST00000445705 Uniprot:Q5QPP1
Length = 194
Score = 198 (74.8 bits), Expect = 3.9e-15, P = 3.9e-15
Identities = 56/166 (33%), Positives = 88/166 (53%)
Query: 121 VLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYD-----P-SLKRARQKLLQKHQVFI 174
VLVTG AG++GSH L L + G + +DNF++ + P SL+R ++ L V
Sbjct: 5 VLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQE--LTGRSVEF 62
Query: 175 VEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSV 234
E D+ D L +LF F V+H A V ++Q P Y N+ G + LLE+ K+
Sbjct: 63 EEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH 122
Query: 235 NPQPSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEI 280
+ ++V++SS++VYG +P E+H T + Y +K EE+
Sbjct: 123 GVK-NLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEM 167
>UNIPROTKB|Q5QPP2 [details] [associations]
symbol:GALE "UDP-glucose 4-epimerase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IEA] [GO:0006012 "galactose metabolic process"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
PANTHER:PTHR10366:SF39 EMBL:AL031295 UniGene:Hs.632380
HGNC:HGNC:4116 HOVERGEN:HBG001396 IPI:IPI00644364 SMR:Q5QPP2
Ensembl:ENST00000425913 Uniprot:Q5QPP2
Length = 195
Score = 198 (74.8 bits), Expect = 3.9e-15, P = 3.9e-15
Identities = 56/166 (33%), Positives = 88/166 (53%)
Query: 121 VLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYD-----P-SLKRARQKLLQKHQVFI 174
VLVTG AG++GSH L L + G + +DNF++ + P SL+R ++ L V
Sbjct: 5 VLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQE--LTGRSVEF 62
Query: 175 VEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSV 234
E D+ D L +LF F V+H A V ++Q P Y N+ G + LLE+ K+
Sbjct: 63 EEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH 122
Query: 235 NPQPSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEI 280
+ ++V++SS++VYG +P E+H T + Y +K EE+
Sbjct: 123 GVK-NLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEM 167
>POMBASE|SPBC365.14c [details] [associations]
symbol:uge1 "UDP-glucose 4-epimerase Uge1" species:4896
"Schizosaccharomyces pombe" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IDA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0033499 "galactose catabolic process via
UDP-galactose" evidence=ISS] [GO:0042125 "protein galactosylation"
evidence=IMP] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
UniPathway:UPA00214 InterPro:IPR016040 PomBase:SPBC365.14c
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CU329671
eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 KO:K01784 HSSP:P04397 OrthoDB:EOG4NKG3T
GO:GO:0033499 GO:GO:0042125 OMA:ADKAWNA PIR:T40321
RefSeq:NP_596043.1 ProteinModelPortal:Q9Y7X5 SMR:Q9Y7X5
STRING:Q9Y7X5 PRIDE:Q9Y7X5 EnsemblFungi:SPBC365.14c.1
GeneID:2540938 KEGG:spo:SPBC365.14c NextBio:20802053 Uniprot:Q9Y7X5
Length = 355
Score = 214 (80.4 bits), Expect = 4.4e-15, P = 4.4e-15
Identities = 97/350 (27%), Positives = 154/350 (44%)
Query: 120 TVLVTGAAGFVGSHCSLALKKRGDGVLGLDNF-NSYYDPSLKRARQKLLQKHQVFIVEGD 178
TVLVTG AG++GSH + L ++G V+ +DN NS + ++ R +KL K +F + D
Sbjct: 8 TVLVTGGAGYIGSHTCVVLLEKGYDVVIVDNLCNSRVE-AVHRI-EKLTGKKVIFH-QVD 64
Query: 179 LNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQP 238
L D P L K+F + V+H A V ++Q P SY +NI+G +NL+E K N +
Sbjct: 65 LLDEPALDKVFANQNISAVIHFAGLKAVGESVQVPLSYYKNNISGTINLIECMKKYNVR- 123
Query: 239 SIVWASSSSVYGLNTQ----VPFSESHRTDQPASLYAATKKAGEEIAHTYNHIY-GLALT 293
V++SS++VYG T+ +P ES + S Y TK E I + L
Sbjct: 124 DFVFSSSATVYGDPTRPGGTIPIPESCPREG-TSPYGRTKLFIENIIEDETKVNKSLNAA 182
Query: 294 GLRFFTVYG----------PWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYID 343
LR+F G P G P+ + + + G+ +D D D T I
Sbjct: 183 LLRYFNPGGAHPSGELGEDPLGIPNNLLPYIAQ-VAVGR-LDHLNVFGDDYPTSDGTPIR 240
Query: 344 DVVKGCVGALDTAXXXXXXXXXXXXP-AQLRVYNLGNTSPVPVGRLVSILENLLNTKAKK 402
D + C D A R +NLG+ + V ++++ + +
Sbjct: 241 DYIHVC----DLAEAHVAALDYLRQHFVSCRPWNLGSGTGSTVFQVLNAFSKAVG-RDLP 295
Query: 403 HVIRMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKWYVSY-YG 451
+ + R GDV AN + A ++ +K + + +W Y YG
Sbjct: 296 YKVTPRRAGDVVNLTANPTRANEELKWKTSRSIYEICVDTWRWQQKYPYG 345
>UNIPROTKB|F1P029 [details] [associations]
symbol:TGDS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 PANTHER:PTHR10366:SF41
OMA:GFIASHM EMBL:AADN02029320 IPI:IPI00594682
Ensembl:ENSGALT00000027315 Uniprot:F1P029
Length = 365
Score = 213 (80.0 bits), Expect = 6.8e-15, P = 6.8e-15
Identities = 79/332 (23%), Positives = 140/332 (42%)
Query: 121 VLVTGAAGFVGSHCSLALKKRGDG--VLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGD 178
+LVTG AGF+ SH ++L + ++ LD + Y SLK + + +K ++GD
Sbjct: 25 LLVTGGAGFIASHVVVSLVRNYPNYLIINLDKLD--YCASLKNL-ETVSEKENYKFIQGD 81
Query: 179 LNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQP 238
+ + + +LF+ VLH AAQ V + + + N+ G L+ N +
Sbjct: 82 ICEPHFIKQLFETEKIDIVLHFAAQTHVDLSFWHALEFTYVNVYGTNVLVAAAHEANVE- 140
Query: 239 SIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRFF 298
V+ S+ VYG +T F ES P + YA++K A E +Y Y + R
Sbjct: 141 KFVYVSTDEVYGGSTDQEFDESS-PKCPTNPYASSKAAAECFVQSYWERYQFPVVITRSS 199
Query: 299 TVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGALDTAXX 358
VYGP P+ F + Q + ++ + R R+F Y DVV+ + L
Sbjct: 200 NVYGPHQYPEKVIPKFISLLQQNRKCCIHGSGLQR---RNFLYATDVVEAFLTVLKEGKP 256
Query: 359 XXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAKKH----VIRMPRNGDVP 414
++ + L L+ +++ + +H V P N D+
Sbjct: 257 GEIYNIGTNF--EMSIVQLAK-------ELIHLIKKTSSESEMEHWMDYVKDRPTN-DLR 306
Query: 415 YTHANVSLAYKDFGYKPTTDLAAGLRKFVKWY 446
Y ++ + + G++P G++K ++WY
Sbjct: 307 YPMSSEKM--HNLGWRPKVPWKEGIKKTIEWY 336
>TIGR_CMR|BA_5700 [details] [associations]
symbol:BA_5700 "UDP-glucose 4-epimerase" species:198094
"Bacillus anthracis str. Ames" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:Q14376 RefSeq:NP_847846.1 RefSeq:YP_022385.1
RefSeq:YP_031541.1 ProteinModelPortal:Q81JK4 SMR:Q81JK4
DNASU:1085447 EnsemblBacteria:EBBACT00000009571
EnsemblBacteria:EBBACT00000018180 EnsemblBacteria:EBBACT00000022977
GeneID:1085447 GeneID:2816576 GeneID:2853003 KEGG:ban:BA_5700
KEGG:bar:GBAA_5700 KEGG:bat:BAS5304 OMA:TENNIDW
ProtClustDB:CLSK888129 BioCyc:BANT260799:GJAJ-5377-MONOMER
BioCyc:BANT261594:GJ7F-5553-MONOMER Uniprot:Q81JK4
Length = 338
Score = 211 (79.3 bits), Expect = 7.5e-15, P = 7.5e-15
Identities = 90/349 (25%), Positives = 152/349 (43%)
Query: 119 MTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGD 178
M +L+TG AG++GSH + L ++ +DN ++ SL R ++ + K F E
Sbjct: 1 MAILITGGAGYIGSHTCVELLNNNYKIIVVDNLSNSSIESLNRVKE-ITGKQFEFYKENV 59
Query: 179 LNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQP 238
LN + ++F V+H A V + P +Y +NI + L +V + N +
Sbjct: 60 LNREKM-NEIFLENNIEAVIHFAGFKAVGESTTTPLAYYYNNIISAIVLCDVMQKHNVK- 117
Query: 239 SIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTY---NHIYGLALTGL 295
+ +++SS++VYG+ +P +E + Y TK E+I + + +AL L
Sbjct: 118 NFIFSSSATVYGIPKTLPITEEFPLSV-TNPYGQTKLMIEQIMRDVAKADDEWSIAL--L 174
Query: 296 RFFTVYG----------PWGRPDMAYFFFTKDILQGKTIDV------YKTQDDREVARDF 339
R+F +G P G P+ + T+ + GK ++ Y T+D V RD+
Sbjct: 175 RYFNPFGAHQSGRIGEDPNGIPNNLMPYVTQ-VAVGKLKELNIFGNDYPTKDGTGV-RDY 232
Query: 340 TYIDDVVKGCVGALDTAXXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILENLLNTK 399
++ D+ KG V AL+ + YNLG V +V E + K
Sbjct: 233 IHVVDLAKGHVKALEKVLKTKG----------IEAYNLGTGKGYSVLEMVKAFEKVSGKK 282
Query: 400 AKKHVIRMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKWYVS 448
VI R GDV A+VS A ++ G++ L +W V+
Sbjct: 283 IPYKVIGR-RPGDVAICFADVSKAKRELGWEAEYGLEEMCVDSWRWQVN 330
>UNIPROTKB|A6QLW2 [details] [associations]
symbol:TGDS "dTDP-D-glucose 4,6-dehydratase" species:9913
"Bos taurus" [GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 eggNOG:COG1088
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
EMBL:BC148106 IPI:IPI00704940 RefSeq:NP_001094629.1
UniGene:Bt.41863 ProteinModelPortal:A6QLW2 STRING:A6QLW2
Ensembl:ENSBTAT00000006984 GeneID:534594 KEGG:bta:534594 CTD:23483
HOVERGEN:HBG007741 InParanoid:A6QLW2 OrthoDB:EOG4PVP08
NextBio:20876459 Uniprot:A6QLW2
Length = 355
Score = 212 (79.7 bits), Expect = 7.7e-15, P = 7.7e-15
Identities = 84/336 (25%), Positives = 141/336 (41%)
Query: 121 VLVTGAAGFVGSHCSLALKKRGDG--VLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGD 178
VLVTG AGF+ SH ++L + ++ LD + Y SLK + + K ++GD
Sbjct: 20 VLVTGGAGFIASHMIVSLVEDYPNYMIINLDKLD--YCASLKNL-ETISNKQNYKFIQGD 76
Query: 179 LNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQP 238
+ D+ + LF+ VLH AAQ V + + N+ G L+ +
Sbjct: 77 ICDSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAHEARVE- 135
Query: 239 SIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRFF 298
++ S+ VYG + F ES QP + YA++K A E +Y Y + R
Sbjct: 136 KFIYVSTDEVYGGSLDKEFDESS-PKQPTNPYASSKAAAECFVQSYWEQYKFPVVITRSS 194
Query: 299 TVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGALDTAXX 358
VYGP P+ F + + ++ T R+F Y DVV+ + L
Sbjct: 195 NVYGPHQYPEKVIPKFISLLQHNRKCCIHGTGLQ---TRNFLYATDVVEAFLTVLKKGK- 250
Query: 359 XXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILENLL---NTKAKK-----HVIRMPRN 410
P + +YN+G + V +L L L+ N++++ +V P N
Sbjct: 251 ----------PGE--IYNIGTNFEMSVLQLAKELIQLIKETNSESEMENWVDYVDDRPTN 298
Query: 411 GDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKWY 446
D+ Y + + G++P G++K ++WY
Sbjct: 299 -DMRYPMKSEKI--HGLGWRPKVPWKEGIKKTIEWY 331
>UNIPROTKB|O95455 [details] [associations]
symbol:TGDS "dTDP-D-glucose 4,6-dehydratase" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AL359708 GO:GO:0008460 eggNOG:COG1088
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
CTD:23483 HOVERGEN:HBG007741 OrthoDB:EOG4PVP08 EMBL:AJ006068
EMBL:AF048686 EMBL:AL139318 EMBL:BC033675 IPI:IPI00003774
RefSeq:NP_055120.1 UniGene:Hs.12393 ProteinModelPortal:O95455
SMR:O95455 IntAct:O95455 MINT:MINT-4773441 STRING:O95455
PhosphoSite:O95455 PRIDE:O95455 DNASU:23483 Ensembl:ENST00000261296
GeneID:23483 KEGG:hsa:23483 UCSC:uc001vlw.3 GeneCards:GC13M095226
HGNC:HGNC:20324 HPA:HPA039927 HPA:HPA040857 neXtProt:NX_O95455
PharmGKB:PA128395791 InParanoid:O95455 PhylomeDB:O95455
GenomeRNAi:23483 NextBio:45843 ArrayExpress:O95455 Bgee:O95455
CleanEx:HS_TGDS Genevestigator:O95455 GermOnline:ENSG00000088451
Uniprot:O95455
Length = 350
Score = 211 (79.3 bits), Expect = 9.3e-15, P = 9.3e-15
Identities = 85/343 (24%), Positives = 143/343 (41%)
Query: 116 PNGMT--VLVTGAAGFVGSHCSLALKKRGDG--VLGLDNFNSYYDPSLKRARQKLLQKHQ 171
P G VLVTG AGF+ SH ++L + ++ LD + Y SLK + + K
Sbjct: 13 PGGFAKRVLVTGGAGFIASHMIVSLVEDYPNYMIINLDKLD--YCASLKNL-ETISNKQN 69
Query: 172 VFIVEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVC 231
++GD+ D+ + LF+ VLH AAQ V + + N+ G L+
Sbjct: 70 YKFIQGDICDSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAA 129
Query: 232 KSVNPQPSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLA 291
+ ++ S+ VYG + F ES QP + YA++K A E +Y Y
Sbjct: 130 HEARVE-KFIYVSTDEVYGGSLDKEFDESS-PKQPTNPYASSKAAAECFVQSYWEQYKFP 187
Query: 292 LTGLRFFTVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVG 351
+ R VYGP P+ F + + ++ + R+F Y DVV+ +
Sbjct: 188 VVITRSSNVYGPHQYPEKVIPKFISLLQHNRKCCIHGSGLQ---TRNFLYATDVVEAFLT 244
Query: 352 ALDTAXXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILENLL---NTKAKK-----H 403
L P + +YN+G + V +L L L+ N++++ +
Sbjct: 245 VLKKGK-----------PGE--IYNIGTNFEMSVVQLAKELIQLIKETNSESEMENWVDY 291
Query: 404 VIRMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKWY 446
V P N D+ Y + + G++P G++K ++WY
Sbjct: 292 VNDRPTN-DMRYPMKSEKI--HGLGWRPKVPWKEGIKKTIEWY 331
>UNIPROTKB|G4MX57 [details] [associations]
symbol:MGG_08012 "UDP-glucose 4-epimerase" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:CM001232 KO:K01784 RefSeq:XP_003714962.1
ProteinModelPortal:G4MX57 SMR:G4MX57 EnsemblFungi:MGG_08012T0
GeneID:2678278 KEGG:mgr:MGG_08012 Uniprot:G4MX57
Length = 369
Score = 174 (66.3 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 53/165 (32%), Positives = 82/165 (49%)
Query: 120 TVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGDL 179
TVL+TG G++GS SLAL + V+ +DN Y ++ R +L+ + D+
Sbjct: 5 TVLITGGTGYIGSFTSLALLENDYDVVIVDNL--YNSSAVAIDRIELICGKRPAFHNVDI 62
Query: 180 NDAPLLTKLFDVVP-FTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQP 238
D L K+FD P V+H AA V + + P Y N+ G ++LL + N
Sbjct: 63 TDEAALDKVFDAHPEIDSVIHFAALKAVGESGEIPLEYYRVNVGGSISLLRSMQKHNVC- 121
Query: 239 SIVWASSSSVYGLNTQVPFS---ESHRTDQPASLYAATKKAGEEI 280
+IV++SS++VYG T+VP H P + Y TK E++
Sbjct: 122 NIVFSSSATVYGDATRVPNMIPIPEHCPIGPTNTYGRTKSTIEDV 166
Score = 81 (33.6 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 29/121 (23%), Positives = 53/121 (43%)
Query: 325 DVYKTQDDREVARDFTYIDDVVKGCVGALDTAXXXXXXXXXXXXPAQLRVYNLGNTSPVP 384
D Y ++D + RD+ ++ D+ KG + AL+ P ++ +NLG+
Sbjct: 238 DDYSSRDGTAI-RDYIHVLDLAKGHLAALN--------YLRDNKPG-VKAWNLGSGRGST 287
Query: 385 VGRLVSILENLLNTKAKKHVIRMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVK 444
V ++ +++ V+ R GDV AN +LA K+ G+K + + K
Sbjct: 288 VFEMIKAFSSVVGRDLPYEVVPR-RQGDVLDLTANPALANKELGWKTELRMEDACQDLWK 346
Query: 445 W 445
W
Sbjct: 347 W 347
>UNIPROTKB|B0RVL0 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:509169
"Xanthomonas campestris pv. campestris str. B100" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
EMBL:AM920689 GenomeReviews:AM920689_GR GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
KO:K01710 PANTHER:PTHR10366:SF41 EMBL:AF204145
RefSeq:YP_001905139.1 ProteinModelPortal:B0RVL0 SMR:B0RVL0
STRING:B0RVL0 GeneID:6324993 KEGG:xca:xccb100_3734 PATRIC:24087420
OMA:GFIASHM ProtClustDB:CLSK445958 Uniprot:B0RVL0
Length = 351
Score = 210 (79.0 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 67/234 (28%), Positives = 109/234 (46%)
Query: 120 TVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGDL 179
T LVTG AGF+G + L RG V+ LD Y +L +F V+GD+
Sbjct: 3 TWLVTGGAGFIGGNFVLEAVSRGIRVVNLDALT--YAGNLNTLASLEGNADHIF-VKGDI 59
Query: 180 NDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSV-NPQP 238
D L+T+L VL+ AA++ V +++ P +++ +N+ G + LLE + P
Sbjct: 60 GDGALVTRLLQEHQPDAVLNFAAESHVDRSIEGPGAFIQTNVVGTLALLEAVRDYWKALP 119
Query: 239 S-------IVWASSSSVYG-LNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGL 290
+ S+ VYG L F+E+ P S Y+A+K A + + ++H YGL
Sbjct: 120 DTRRDAFRFLHVSTDEVYGTLGETGKFTET-TPYAPNSPYSASKAASDHLVRAFHHTYGL 178
Query: 291 ALTGLRFFTVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDD 344
+ YGP+ P+ L G+ + VY D ++V RD+ ++ D
Sbjct: 179 PVLTTNCSNNYGPYHFPEKLIPLVIAKALAGEPLPVYG--DGKQV-RDWLFVSD 229
>UNIPROTKB|P0C7J0 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:190485
"Xanthomonas campestris pv. campestris str. ATCC 33913" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
EMBL:AE008922 GenomeReviews:AE008922_GR GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
ProtClustDB:CLSK445958 RefSeq:NP_636013.1 ProteinModelPortal:P0C7J0
SMR:P0C7J0 GeneID:1001158 KEGG:xcc:XCC0621 PATRIC:24071892
Uniprot:P0C7J0
Length = 351
Score = 210 (79.0 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 88/348 (25%), Positives = 146/348 (41%)
Query: 120 TVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGDL 179
T LVTG AGF+G + L RG V+ LD Y +L +F V+GD+
Sbjct: 3 TWLVTGRAGFIGGNFVLEAVSRGIRVVNLDALT--YAGNLNTLASLEGNADHIF-VKGDI 59
Query: 180 NDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSV-NPQP 238
D L+T+L VL+ AA++ V +++ P +++ +N+ G + LLE + P
Sbjct: 60 GDGALVTRLLQEHQPDAVLNFAAESHVDRSIEGPGAFIQTNVVGTLALLEAVRDYWKALP 119
Query: 239 S-------IVWASSSSVYG-LNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGL 290
+ S+ VYG L F+E+ P S Y+A+K A + + ++H YGL
Sbjct: 120 DTRRDAFRFLHVSTDEVYGTLGETGKFTET-TPYAPNSPYSASKAASDHLVRAFHHTYGL 178
Query: 291 ALTGLRFFTVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCV 350
+ YGP+ P+ L G+ + VY D ++V RD+ ++ D C
Sbjct: 179 PVLTTNCSNNYGPYHFPEKLIPLVIAKALAGEPLPVYG--DGKQV-RDWLFVSD---HCE 232
Query: 351 GALDTAXXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAKKHVIRMPRN 410
A+ T YN+G S +V + LL+ + + PR
Sbjct: 233 -AIRTVLAKGRVG---------ETYNVGGNSERQNIEVVQAICALLDQHRPREDGK-PRE 281
Query: 411 GDVPYT-----H-----ANVSLAYKDFGYKPTTDLAAGLRKFVKWYVS 448
+ Y H + S + G++P G+ + V WY++
Sbjct: 282 SQIAYVTDRPGHDRRYAIDASKLKDELGWEPAYTFEQGIAQTVDWYLT 329
>TIGR_CMR|SO_1664 [details] [associations]
symbol:SO_1664 "UDP-glucose 4-epimerase" species:211586
"Shewanella oneidensis MR-1" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0005975 "carbohydrate metabolic
process" evidence=ISS] InterPro:IPR001509 InterPro:IPR005886
Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:P09147 RefSeq:NP_717275.1 ProteinModelPortal:Q8EGE0
GeneID:1169457 KEGG:son:SO_1664 PATRIC:23522965 OMA:CGKSIAY
ProtClustDB:CLSK906369 Uniprot:Q8EGE0
Length = 337
Score = 209 (78.6 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 89/334 (26%), Positives = 145/334 (43%)
Query: 119 MTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGD 178
MT+LVTG AG++G+H + L G V+ LDN ++ +L R +++ K F +GD
Sbjct: 1 MTILVTGGAGYIGTHTVVELLNAGSEVIVLDNLSNSSIEALDRV-ERITGKSVTFY-QGD 58
Query: 179 LNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQP 238
+ + LL K+F V+H A V ++ P Y +N+ G + L +V +
Sbjct: 59 ILNKALLQKVFSDHSIDAVIHFAGLKAVGESVAKPLKYYENNVTGTLILCQVMAEFKVK- 117
Query: 239 SIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIY-GLALTGLRF 297
++V++SS++VYG +P +E T + Y +K E I +H + LR+
Sbjct: 118 NLVFSSSATVYGDPASLPITEDFPTGA-TNPYGQSKLMVEHILADLHHSDPSWNIARLRY 176
Query: 298 FTVYG----------PWGRPDMAYFFFTKDILQGK--TIDV----YKTQDDREVARDFTY 341
F G P P+ F + + GK + V Y T D V RD+ +
Sbjct: 177 FNPVGAHASGLIGEDPNDIPNNLMPFIAQ-VAVGKREALSVFGNDYPTHDGTGV-RDYIH 234
Query: 342 IDDVVKGCVGALDTAXXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAK 401
+ D+ G + AL+ P L YNLG V +V E K+
Sbjct: 235 VVDLAIGHLKALEKLATK---------PG-LVTYNLGTGQGYSVLDMVKAFEKACG-KSI 283
Query: 402 KHVIRMPRNGDVPYTHANVSLAYKDFGYKPTTDL 435
++I R GD+ +A+ A D ++ T L
Sbjct: 284 AYLIAPRRPGDIAACYADPDHAKTDLDWQATHSL 317
>TAIR|locus:2014235 [details] [associations]
symbol:RHD1 "ROOT HAIR DEFECTIVE 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA;TAS] [GO:0005794 "Golgi apparatus"
evidence=ISM] [GO:0006012 "galactose metabolic process"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0010053 "root epidermal cell differentiation" evidence=IMP]
[GO:0009832 "plant-type cell wall biogenesis" evidence=TAS]
[GO:0009969 "xyloglucan biosynthetic process" evidence=IMP]
[GO:0010246 "rhamnogalacturonan I biosynthetic process"
evidence=IMP] [GO:0010306 "rhamnogalacturonan II biosynthetic
process" evidence=IMP] [GO:0005795 "Golgi stack" evidence=IDA]
[GO:0046983 "protein dimerization activity" evidence=IPI]
[GO:0042546 "cell wall biogenesis" evidence=IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0005795 GO:GO:0009832 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
GO:GO:0010053 EMBL:AC066689 GO:GO:0009969 HSSP:Q14376
ProtClustDB:PLN02240 EMBL:BT011226 EMBL:BT012154 IPI:IPI00537209
RefSeq:NP_176625.1 UniGene:At.25758 ProteinModelPortal:Q9C7W7
SMR:Q9C7W7 STRING:Q9C7W7 PaxDb:Q9C7W7 PRIDE:Q9C7W7
EnsemblPlants:AT1G64440.1 GeneID:842752 KEGG:ath:AT1G64440
TAIR:At1g64440 InParanoid:Q9C7W7 OMA:HVAGYKY PhylomeDB:Q9C7W7
Genevestigator:Q9C7W7 Uniprot:Q9C7W7
Length = 348
Score = 206 (77.6 bits), Expect = 3.6e-14, P = 3.6e-14
Identities = 86/344 (25%), Positives = 142/344 (41%)
Query: 121 VLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKH--QVFIVEGD 178
+LVTG AG++GSH L L G + +DN ++ S++R + L H + + + D
Sbjct: 5 ILVTGGAGYIGSHTVLQLLLGGYNTVVIDNLDNSSLVSIQRVKD-LAGDHGQNLTVHQVD 63
Query: 179 LNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQP 238
L D P L K+F F V+H A V ++ P Y +N+ + LLEV + +
Sbjct: 64 LRDKPALEKVFSETKFDAVMHFAGLKAVGESVAKPLLYYNNNLIATITLLEVM-AAHGCK 122
Query: 239 SIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNH-IYGLALTGLRF 297
+V++SS++VYG +VP +E S Y TK E+I + LR+
Sbjct: 123 KLVFSSSATVYGWPKEVPCTEESPLSG-MSPYGRTKLFIEDICRDVQRGDPEWRIIMLRY 181
Query: 298 FTVYG----------PWGRPDMAYFFFTKDILQGK--TIDVYKTQ---DDREVARDFTYI 342
F G P G P+ + + ++ G+ + +Y T D RD+ ++
Sbjct: 182 FNPVGAHPSGRIGEDPCGTPNNL-MPYVQQVVVGRLPNLKIYGTDYTTKDGTGVRDYIHV 240
Query: 343 DDVVKGCVGALDTAXXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAKK 402
D+ G + AL VYNLG V +V E K
Sbjct: 241 VDLADGHICALQKLDDTEIG---------CEVYNLGTGKGTTVLEMVDAFEKASGMKIP- 290
Query: 403 HVIRMPRN-GDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKW 445
++++ R GD +A+ A ++ +K + R W
Sbjct: 291 -LVKVGRRPGDAETVYASTEKAERELNWKANFGIEEMCRDQWNW 333
>TIGR_CMR|CPS_2147 [details] [associations]
symbol:CPS_2147 "UDP-glucose 4-epimerase" species:167879
"Colwellia psychrerythraea 34H" [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=ISS] [GO:0006012 "galactose
metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
RefSeq:YP_268872.1 ProteinModelPortal:Q482Z5 SMR:Q482Z5
STRING:Q482Z5 GeneID:3518989 KEGG:cps:CPS_2147 PATRIC:21467411
OMA:QTAMGIR BioCyc:CPSY167879:GI48-2217-MONOMER Uniprot:Q482Z5
Length = 340
Score = 205 (77.2 bits), Expect = 4.2e-14, P = 4.2e-14
Identities = 86/346 (24%), Positives = 157/346 (45%)
Query: 119 MTVLVTGAAGFVGSHCSLALKK--RGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVE 176
M++L+TG G++GSH + L + + ++ +DN ++ L+R +Q + K FI +
Sbjct: 1 MSLLITGGTGYIGSHTVVELLQSTKEQEIVIVDNLSNSSTKVLERIKQ-ITNKTVTFI-K 58
Query: 177 GDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNP 236
D+ D L ++F+ V+H A V + + P +Y +N++G + LL V
Sbjct: 59 ADVCDENALEQVFNEHKIEAVIHFAGLKAVGESNEIPLAYYQNNVSGTITLLRVMAKYQV 118
Query: 237 QPSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTY-NHIYGLALTGL 295
+ ++V++SS++VYG N P +E+ T + Y TK E + ++ L
Sbjct: 119 K-NLVFSSSATVYGNNVS-PLNETMATSA-TNPYGQTKLMVEHVLFDLAKSDASWSIACL 175
Query: 296 RFFTVYG----------PWGRPDMAYFFFTKDI---LQGKTI--DVYKTQDDREVARDFT 340
R+F G P G P+ + + L+ I D Y TQD V RD+
Sbjct: 176 RYFNPIGAHQSGLIGENPNGIPNNLLPYVAQVAVGRLEQLQIFGDDYDTQDGTGV-RDYI 234
Query: 341 YIDDVVKGCVGALDTAXXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILENLLNTKA 400
++ D+ +G V AL++ + NLG + V +V+ +++
Sbjct: 235 HVVDLAQGHVKALESLGHAKGTVKG------CQAINLGTGNGTSVLEIVNTFKDISKQDI 288
Query: 401 KKHVIRMPRN-GDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKW 445
V+ PR GD+ +A+ SLA + ++ DL A ++ +W
Sbjct: 289 PYQVV--PRRAGDLATVYADASLANELLDWQAKLDLTAMIQDTWRW 332
>MGI|MGI:1923605 [details] [associations]
symbol:Tgds "TDP-glucose 4,6-dehydratase" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0016829 "lyase activity" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 MGI:MGI:1923605 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009225 GeneTree:ENSGT00530000063128
GO:GO:0008460 eggNOG:COG1088 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 OMA:GFIASHM CTD:23483 HOVERGEN:HBG007741
OrthoDB:EOG4PVP08 EMBL:AK154341 EMBL:BC021419 IPI:IPI00405383
RefSeq:NP_083854.3 UniGene:Mm.251537 ProteinModelPortal:Q8VDR7
SMR:Q8VDR7 STRING:Q8VDR7 PhosphoSite:Q8VDR7 PRIDE:Q8VDR7
Ensembl:ENSMUST00000022727 GeneID:76355 KEGG:mmu:76355
InParanoid:Q3U4A6 NextBio:344957 Bgee:Q8VDR7 CleanEx:MM_TGDS
Genevestigator:Q8VDR7 GermOnline:ENSMUSG00000022130 Uniprot:Q8VDR7
Length = 355
Score = 205 (77.2 bits), Expect = 5.2e-14, P = 5.2e-14
Identities = 82/329 (24%), Positives = 136/329 (41%)
Query: 121 VLVTGAAGFVGSHCSLALKKRGDG--VLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGD 178
VLVTG AGF+ SH ++L + ++ LD + Y SLK + + K ++GD
Sbjct: 20 VLVTGGAGFIASHVIVSLVEDYPDYMIVNLDKLD--YCASLKNL-EPVSNKQNYKFIQGD 76
Query: 179 LNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQP 238
+ D+ + LF+V VLH AAQ V + + N+ G L+ +
Sbjct: 77 ICDSHFVKLLFEVEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVNAAYEAGVE- 135
Query: 239 SIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRFF 298
++ S+ VYG + F ES QP + YA++K A E +Y Y + R
Sbjct: 136 KFIYVSTDEVYGGSLDQEFDESS-PKQPTNPYASSKAAAECFVQSYWERYKFPVVITRSS 194
Query: 299 TVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGALDTAXX 358
VYGP P+ F + + ++ + R R+F Y DVV+ + L
Sbjct: 195 NVYGPHQYPEKVIPKFISLLQHNRKCCIHGSGLQR---RNFLYAADVVEAFLTVLTKGEP 251
Query: 359 XXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILENLLNTKA-KKHVIRMPRNGDVPYTH 417
++ V L + +L+ + T++ +V P N D+ Y
Sbjct: 252 GEIYNIGTNF--EMSVVQLAKE----LIQLIKETNSESETESWVDYVSDRPHN-DMRYPM 304
Query: 418 ANVSLAYKDFGYKPTTDLAAGLRKFVKWY 446
+ + G+KP G++K V+WY
Sbjct: 305 KSEKI--HSLGWKPKVPWEEGIKKTVEWY 331
>UNIPROTKB|P44914 [details] [associations]
symbol:rffG "dTDP-glucose 4,6-dehydratase" species:71421
"Haemophilus influenzae Rd KW20" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:L42023
GenomeReviews:L42023_GR GO:GO:0009103 GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
KO:K01710 PANTHER:PTHR10366:SF41 PIR:C64099 RefSeq:NP_439034.2
ProteinModelPortal:P44914 SMR:P44914 GeneID:949510 KEGG:hin:HI0873
PATRIC:20190401 OMA:AKKAFRF ProtClustDB:CLSK824762 Uniprot:P44914
Length = 338
Score = 203 (76.5 bits), Expect = 6.9e-14, P = 6.9e-14
Identities = 83/349 (23%), Positives = 148/349 (42%)
Query: 119 MTVLVTGAAGFVGSHC-SLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEG 177
M +LVTG +GF+GS + D V+ +D Y + R+ ++ + ++ E
Sbjct: 2 MNILVTGGSGFIGSALIRYIINHTQDFVINIDKLT--YAANQSALRE--VENNPRYVFEK 57
Query: 178 -DLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKS--- 233
D+ D ++ +F+ V+HLAA++ V ++ +V +NI G LLEV K+
Sbjct: 58 VDICDLNVIENIFEKYQPDAVMHLAAESHVDRSISGAADFVQTNIVGTYTLLEVAKNYWH 117
Query: 234 -VNPQPSIVWA----SSSSVYG-LNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHI 287
++ + S+ VYG L+ P P+S Y+A+K A + ++
Sbjct: 118 TLDEAKKTTFRFHHISTDEVYGDLSLSEPAFTEQSPYHPSSPYSASKAASNHLVQAWHRT 177
Query: 288 YGLALTGLRFFTVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVK 347
YGL + YG + + + + GK + +Y D +++ RD+ +++D V+
Sbjct: 178 YGLPVIITNSSNNYGAYQHAEKLIPLMISNAVMGKPLPIYG--DGQQI-RDWLFVEDHVQ 234
Query: 348 GCVGALDTAXXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAKKHV--- 404
L N T+ V R+ +LE L +K H+
Sbjct: 235 ASYLVLTKGRVGENYNIGG---------NCEKTNLEVVKRICQLLEELAPSKPN-HIKYY 284
Query: 405 -----IRMPRNG-DVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKWYV 447
R G DV Y+ + S + + G++P GLR+ VKWY+
Sbjct: 285 EDLMTFVKDRPGHDVRYS-LDCSKIHAELGWQPQITFEQGLRQTVKWYL 332
>UNIPROTKB|Q9ZAE8 [details] [associations]
symbol:acbB "dTDP-glucose 4,6-dehydratase" species:134676
"Actinoplanes sp. SE50/110" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 GO:GO:0045226 GO:GO:0008460 TIGRFAMs:TIGR01181
KO:K01710 PANTHER:PTHR10366:SF41 EMBL:Y18523 EMBL:CP003170
RefSeq:YP_006266644.1 ProteinModelPortal:Q9ZAE8 SMR:Q9ZAE8
GeneID:12821023 KEGG:ase:ACPL_3681 Uniprot:Q9ZAE8
Length = 320
Score = 200 (75.5 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 90/337 (26%), Positives = 135/337 (40%)
Query: 119 MTVLVTGAAGFVGSHCSLALKKRGD--------GVLGLDNFNSYYDPSLKRARQKLLQKH 170
M +LVTG AGF+GSH +L GD V +D Y +L+ +
Sbjct: 1 MKILVTGGAGFIGSHFVTSLIS-GDIATPQPVTQVTVVDKLG--YGGNLRNLAEASADPR 57
Query: 171 QVFIVEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEV 230
F V GD+ D L+ L + V H AA+ V ++ +VASN+ G LL+
Sbjct: 58 FSF-VRGDICDEGLIEGL--MARHDTVAHFAAETHVDRSVVASGPFVASNLVGTQVLLDA 114
Query: 231 CKSVNPQPSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGL 290
+ + S+ VYG ++E H P S YAA+K + +A Y+ +G+
Sbjct: 115 ALR-HHIGRFLHVSTDEVYGSIDTGSWAEGHPL-APNSPYAASKAGSDLLALAYHQTHGM 172
Query: 291 ALTGLRFFTVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCV 350
+ R YGP P+ F +L G + VY D R + RD+ ++ D +G
Sbjct: 173 DVVVTRCSNNYGPRQFPEKMIPLFVTRLLDGLDVPVYG--DGRNI-RDWLHVSDHCRGLA 229
Query: 351 GALDTAXXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAKKHVIRMPRN 410
AL VY++G L IL A + R
Sbjct: 230 LALGAGRAG-------------EVYHIGGGWEATNLELTEILLEACGAPASRISFVTDRK 276
Query: 411 G-DVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKWY 446
G D Y+ + S + GY+P D G+ + V WY
Sbjct: 277 GHDRRYS-LDYSKIAGELGYRPRVDFTDGIAETVAWY 312
>RGD|1306544 [details] [associations]
symbol:Tgds "TDP-glucose 4,6-dehydratase" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 RGD:1306544
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0008460 PANTHER:PTHR10366:SF41 OMA:GFIASHM IPI:IPI00373689
Ensembl:ENSRNOT00000012925 UCSC:RGD:1306544 Uniprot:F1M7R7
Length = 355
Score = 202 (76.2 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 81/332 (24%), Positives = 138/332 (41%)
Query: 121 VLVTGAAGFVGSHCSLALKKRGDG--VLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGD 178
VLVTG AGF+ SH ++L + ++ LD + Y SLK + + K ++GD
Sbjct: 20 VLVTGGAGFIASHVIVSLVEDYPNYMIINLDKLD--YCASLKNL-EPVSNKQNYKFIQGD 76
Query: 179 LNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQP 238
+ D+ + +LF+ VLH AAQ V + + N+ G L+ +
Sbjct: 77 ICDSHFVKRLFESEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVNTAYEARVE- 135
Query: 239 SIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRFF 298
++ S+ VYG + F ES QP + YA++K A E +Y Y + R
Sbjct: 136 KFIYVSTDEVYGGSLDQEFDESS-PKQPTNPYASSKAAAECFVQSYWERYKFPVVITRSS 194
Query: 299 TVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGALDTAXX 358
VYGP P+ F + + ++ + R R+F Y DVV+ + L
Sbjct: 195 NVYGPHQYPEKVIPKFISLLQHDRKCCIHGSGLQR---RNFLYAADVVEAFLTVLTKGEP 251
Query: 359 XXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSIL-ENLLNTKAKK---HVIRMPRNGDVP 414
++ V L L+ ++ E +++ ++ +V P N D+
Sbjct: 252 GEIYNIGTNF--EMSVVQLAK-------ELIQLIKETNSDSETERWVDYVSDRPHN-DMR 301
Query: 415 YTHANVSLAYKDFGYKPTTDLAAGLRKFVKWY 446
Y + + G+KP G++K V+WY
Sbjct: 302 YPMKSEKI--HSLGWKPKVPWEEGIKKTVEWY 331
>DICTYBASE|DDB_G0279465 [details] [associations]
symbol:tgds "putative dTDP-D-glucose 4,6-dehydratase"
species:44689 "Dictyostelium discoideum" [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=IEA] [GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016829 "lyase activity"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 dictyBase:DDB_G0279465 GO:GO:0000166
Gene3D:3.40.50.720 GenomeReviews:CM000152_GR GO:GO:0050662
GO:GO:0009225 EMBL:AAFI02000031 GO:GO:0008460 eggNOG:COG1088
HSSP:P27830 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
RefSeq:XP_641641.1 ProteinModelPortal:Q54WS6 STRING:Q54WS6
EnsemblProtists:DDB0231748 GeneID:8622047 KEGG:ddi:DDB_G0279465
ProtClustDB:CLSZ2430684 Uniprot:Q54WS6
Length = 434
Score = 204 (76.9 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 63/238 (26%), Positives = 112/238 (47%)
Query: 121 VLVTGAAGFVGSHCSLALKKR--GDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGD 178
+L+TG AGF+GSH ++ L K+ ++ LD + Y ++ L + + F +G+
Sbjct: 12 ILITGGAGFIGSHLAIYLTKKFKNSKIIVLDKLD--YCSNINNLGCVLKELNFKFY-KGN 68
Query: 179 LNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQP 238
+ D+ LL +F+ V+HLAA V + + + +NI G LLE CK+ +
Sbjct: 69 ILDSELLENIFEKEKIDIVIHLAAYTHVDNSFKQSIKFTENNILGTHYLLETCKNYKLK- 127
Query: 239 SIVWASSSSVYGL---------NTQVPFSESHRTD-QPASLYAATKKAGEEIAHTYNHIY 288
++ S+ VYG N + S + ++ P + Y+A+K E + +Y +
Sbjct: 128 KFIYVSTDEVYGSGLIEDNDDNNNSINQSSNEKSILNPTNPYSASKAGAEHLVQSYYKSF 187
Query: 289 GLALTGLRFFTVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVV 346
L + R +YGP P+ F +L K ++ T + R++ YIDD+V
Sbjct: 188 KLPVIITRANNIYGPKQYPEKIIPKFINLLLNNKKCTIHGTGKN---TRNYLYIDDIV 242
Score = 38 (18.4 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 9/38 (23%), Positives = 16/38 (42%)
Query: 412 DVPYTHANVSLAYK---DFGYKPTTDLAAGLRKFVKWY 446
D P+ ++ Y + G+K + G+ K WY
Sbjct: 325 DRPFNDHRYNINYSKLSNLGWKKSISWEEGIEKTFIWY 362
>FB|FBgn0035848 [details] [associations]
symbol:CG7979 species:7227 "Drosophila melanogaster"
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0044237 "cellular metabolic
process" evidence=IEA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 EMBL:AE014296 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 GO:GO:0008460 KO:K08678 OMA:LGHENFE
EMBL:AY051913 RefSeq:NP_648182.1 UniGene:Dm.20044 HSSP:P93031
SMR:Q9VSE8 STRING:Q9VSE8 EnsemblMetazoa:FBtr0076690 GeneID:38911
KEGG:dme:Dmel_CG7979 UCSC:CG7979-RA FlyBase:FBgn0035848
InParanoid:Q9VSE8 OrthoDB:EOG45HQCS GenomeRNAi:38911 NextBio:810971
Uniprot:Q9VSE8
Length = 441
Score = 202 (76.2 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 78/270 (28%), Positives = 123/270 (45%)
Query: 101 AEWEKQVR--HSATPRR-P--------NGMTVLVTGAAGFVGSHCSLALKKRGDGVLGLD 149
A E+QVR ++TPR+ P N +L+TG AGFVGSH L +G V+ +D
Sbjct: 87 ARLEEQVRSLQTSTPRKYPKVKYLNYKNRKRILITGGAGFVGSHLVDDLMVQGHEVIVVD 146
Query: 150 NFNSYYDPSLKRARQKLLQKHQVFIVEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYA 209
NF + KR + L H+ F +L ++ LF + + HLA+ A +
Sbjct: 147 NFFT----GRKRNVEHWLG-HENF----ELIHHDIVNPLF--IEIDEIYHLASPASPPHY 195
Query: 210 MQNPQSYVASNIAGFVNLLEVCKSVNPQPSIVWASSSSVYGLNTQVPFSESH----RTDQ 265
M NP + +N G +N+L + K V ++ AS+S VYG T P E++
Sbjct: 196 MYNPVKTIKTNTMGTINVLGLAKRV--MAKVLIASTSEVYGDPTVHPQPETYWGHVNPIG 253
Query: 266 PASLYAATKKAGEEIAHTYNHIYGLALTGLRFFTVYGPWGRPDMAYFF--FTKDILQGKT 323
P + Y K+ E +++ Y + + R F YGP + F L+ +T
Sbjct: 254 PRACYDEGKRVSETLSYAYAKQEKVQVRVARIFNTYGPRMHMNDGRVVSNFILQALRNET 313
Query: 324 IDVYKTQDDREVARDFTYIDDVVKGCVGAL 353
I VY + + R F Y+ D+V G + +
Sbjct: 314 ITVY---GNGKQTRSFQYVSDLVDGMIALM 340
Score = 145 (56.1 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 65/292 (22%), Positives = 118/292 (40%)
Query: 184 LLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQPSIVWA 243
++ LF + + HLA+ A + M NP + +N G +N+L + K V ++ A
Sbjct: 172 IVNPLF--IEIDEIYHLASPASPPHYMYNPVKTIKTNTMGTINVLGLAKRV--MAKVLIA 227
Query: 244 SSSSVYGLNTQVPFSESH----RTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRFFT 299
S+S VYG T P E++ P + Y K+ E +++ Y + + R F
Sbjct: 228 STSEVYGDPTVHPQPETYWGHVNPIGPRACYDEGKRVSETLSYAYAKQEKVQVRVARIFN 287
Query: 300 VYGPWGRPDMAYFFFTKD-ILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGALDTAXX 358
YGP R M + ILQ + + + R F Y+ D+V G + +
Sbjct: 288 TYGP--RMHMNDGRVVSNFILQALRNETITVYGNGKQTRSFQYVSDLVDGMIALM----- 340
Query: 359 XXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAKKHVIRMPR--NGDVPYT 416
P NLGN +G I++ L+ + VI+ + D
Sbjct: 341 ----ASNYTQPV-----NLGNPVEQTIGEFAEIIKKLVGGPS---VIKQSKAMEDDPQRR 388
Query: 417 HANVSLAYKDFGYKPTTDLAAGLRKFVKWYVSYYGIQPRVKKENG--FSTTT 466
+++ A + ++P L GL++ + ++ + R ++ + F T T
Sbjct: 389 KPDITRARQLLHWEPKVPLETGLQRTISYFRNELARSDRFQESSNKYFDTHT 440
>TAIR|locus:2024902 [details] [associations]
symbol:MUM4 "MUCILAGE-MODIFIED 4" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0008152 "metabolic process" evidence=ISS] [GO:0008831
"dTDP-4-dehydrorhamnose reductase activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0010192 "mucilage
biosynthetic process" evidence=IMP] [GO:0010214 "seed coat
development" evidence=IMP] [GO:0010280 "UDP-L-rhamnose synthase
activity" evidence=ISS;IDA] [GO:0010253 "UDP-rhamnose biosynthetic
process" evidence=IDA] [GO:0010489
"UDP-4-keto-6-deoxy-glucose-3,5-epimerase activity" evidence=TAS]
[GO:0010490 "UDP-4-keto-rhamnose-4-keto-reductase activity"
evidence=TAS] [GO:0050377 "UDP-glucose 4,6-dehydratase activity"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR001509 InterPro:IPR005888 InterPro:IPR005913
Pfam:PF01370 Pfam:PF04321 InterPro:IPR016040 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0010214 EMBL:AC018748
EMBL:AC024260 GO:GO:0010192 GO:GO:0008831 GO:GO:0045226
HOGENOM:HOG000167988 KO:K12450 ProtClustDB:PLN02260 GO:GO:0008460
GO:GO:0050377 GO:GO:0010280 GO:GO:0010253 TIGRFAMs:TIGR01181
EMBL:AJ565874 EMBL:AY328518 IPI:IPI00522138 PIR:B96575
RefSeq:NP_564633.2 UniGene:At.20215 ProteinModelPortal:Q9LPG6
SMR:Q9LPG6 STRING:Q9LPG6 PaxDb:Q9LPG6 PRIDE:Q9LPG6
EnsemblPlants:AT1G53500.1 GeneID:841785 KEGG:ath:AT1G53500
TAIR:At1g53500 eggNOG:COG1088 InParanoid:Q9LPG6 OMA:CESHKPE
PhylomeDB:Q9LPG6 BioCyc:MetaCyc:AT1G53500-MONOMER
Genevestigator:Q9LPG6 GermOnline:AT1G53500 GO:GO:0010489
GO:GO:0010490 Uniprot:Q9LPG6
Length = 667
Score = 205 (77.2 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 66/231 (28%), Positives = 99/231 (42%)
Query: 121 VLVTGAAGFVGSHCSLAL-KKRGD-GVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGD 178
+L+TGAAGF+ SH + L + D ++ LD + Y LK + F V+GD
Sbjct: 11 ILITGAAGFIASHVANRLIRNYPDYKIVVLDKLD--YCSDLKNLDPSFSSPNFKF-VKGD 67
Query: 179 LNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQP 238
+ L+ L ++H AAQ V + N + +NI G LLE CK
Sbjct: 68 IASDDLVNYLLITENIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIR 127
Query: 239 SIVWASSSSVYGLNTQVPFSESHRTDQ--PASLYAATKKAGEEIAHTYNHIYGLALTGLR 296
+ S+ VYG + +H Q P + Y+ATK E + Y YGL + R
Sbjct: 128 RFIHVSTDEVYGETDEDAAVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTR 187
Query: 297 FFTVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVK 347
VYGP P+ F + GK + ++ D R + Y +DV +
Sbjct: 188 GNNVYGPNQFPEKMIPKFILLAMSGKPLPIH---GDGSNVRSYLYCEDVAE 235
>TAIR|locus:2168539 [details] [associations]
symbol:UXS3 "UDP-glucuronic acid decarboxylase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IDA;TAS] [GO:0042732 "D-xylose metabolic process"
evidence=RCA;IDA] [GO:0048040 "UDP-glucuronate decarboxylase
activity" evidence=IDA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0005829 EMBL:CP002688 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0042732
GO:GO:0048040 IPI:IPI00846930 RefSeq:NP_001078768.1
UniGene:At.24136 ProteinModelPortal:F4KHU8 SMR:F4KHU8 PRIDE:F4KHU8
EnsemblPlants:AT5G59290.2 GeneID:836047 KEGG:ath:AT5G59290
OMA:EINMVEN ArrayExpress:F4KHU8 Uniprot:F4KHU8
Length = 357
Score = 199 (75.1 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 86/334 (25%), Positives = 144/334 (43%)
Query: 115 RPNGMTVLVTGAAGFVGSHC-SLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVF 173
+PN M +L++G AGF+GSH ++ + V+ DN Y+ S K +K + +
Sbjct: 42 QPN-MRILISGGAGFIGSHLVDKLMENEKNEVVVADN---YFTGS-KENLKKWIGHPRFE 96
Query: 174 IVEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKS 233
++ D+ + PLL ++ + HLA A + NP + +N+ G +N+L + K
Sbjct: 97 LIRHDVTE-PLLIEV------DRIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKR 149
Query: 234 VNPQPSIVWASSSSVYGLNTQVPFSESHRTD-QPA---SLYAATKKAGEEIAHTYNHIYG 289
V + I+ S+S VYG P ES+ + P S Y K+ E + Y+ +G
Sbjct: 150 VGAR--ILLTSTSEVYGDPLIHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHG 207
Query: 290 LALTGLRFFTVYGPWGRPDMAYFF--FTKDILQGKTIDVYKTQDDREVARDFTYIDDVVK 347
+ + R F YGP D F L+G+ + V K R F Y+ D+V
Sbjct: 208 IEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEALTVQKPGTQ---TRSFCYVSDMVD 264
Query: 348 GCVGALDTAXXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAKKHVIRM 407
G + ++ P N+GN + L ++ L+N + I+M
Sbjct: 265 GLIRLME---------GNDTGPI-----NIGNPGEFTMVELAETVKELINPSIE---IKM 307
Query: 408 PRNG-DVPYTHA-NVSLAYKDFGYKPTTDLAAGL 439
N D P ++S A + G++P L GL
Sbjct: 308 VENTPDDPRQRKPDISKAKEVLGWEPKVKLREGL 341
>TIGR_CMR|BA_5505 [details] [associations]
symbol:BA_5505 "UDP-glucose 4-epimerase" species:198094
"Bacillus anthracis str. Ames" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0046872 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0044237 HOGENOM:HOG000168001
OMA:SHPNGYN GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
RefSeq:NP_847665.1 RefSeq:YP_022172.1 RefSeq:YP_031353.1 PDB:2C20
PDBsum:2C20 ProteinModelPortal:Q81K34 SMR:Q81K34 DNASU:1085150
EnsemblBacteria:EBBACT00000011015 EnsemblBacteria:EBBACT00000018769
EnsemblBacteria:EBBACT00000021224 GeneID:1085150 GeneID:2819098
GeneID:2850681 KEGG:ban:BA_5505 KEGG:bar:GBAA_5505 KEGG:bat:BAS5114
ProtClustDB:CLSK917664 BioCyc:BANT260799:GJAJ-5189-MONOMER
BioCyc:BANT261594:GJ7F-5367-MONOMER EvolutionaryTrace:Q81K34
Uniprot:Q81K34
Length = 330
Score = 197 (74.4 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 78/321 (24%), Positives = 124/321 (38%)
Query: 120 TVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGDL 179
++L+ G AG++GSH L G V+ +DN + ++ ++ + GDL
Sbjct: 3 SILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAITEGAK---------FYNGDL 53
Query: 180 NDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQPS 239
D L +F V+H AA + V +M+ P Y +N+ G + LLEV
Sbjct: 54 RDKAFLRDVFTQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVD-K 112
Query: 240 IVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRFFT 299
+++S+++ YG V P + Y TK A E++ H Y+ L R+F
Sbjct: 113 FIFSSTAATYG-EVDVDLITEETMTNPTNTYGETKLAIEKMLHWYSQASNLRYKIFRYFN 171
Query: 300 VYG--PWG------RPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVG 351
V G P G RP+ + G+ + DD D T I D +
Sbjct: 172 VAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTP-DGTCIRDYIH---- 226
Query: 352 ALDTAXXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAKKHVIRMPRN- 410
D + YNLGN + V +V + + N + V PR
Sbjct: 227 VEDLVAAHFLGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREVTNHEIPAEVA--PRRA 284
Query: 411 GDVPYTHANVSLAYKDFGYKP 431
GD A+ A + G+ P
Sbjct: 285 GDPARLVASSQKAKEKLGWDP 305
>UNIPROTKB|P29782 [details] [associations]
symbol:strE "dTDP-glucose 4,6-dehydratase" species:1911
"Streptomyces griseus" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0019872 "streptomycin biosynthetic
process" evidence=IGI] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 UniPathway:UPA00066
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 GO:GO:0019872 GO:GO:0045226 GO:GO:0008460
TIGRFAMs:TIGR01181 PANTHER:PTHR10366:SF41 EMBL:X62567 PIR:S18617
ProteinModelPortal:P29782 SMR:P29782 Uniprot:P29782
Length = 328
Score = 196 (74.1 bits), Expect = 4.1e-13, P = 4.1e-13
Identities = 89/332 (26%), Positives = 145/332 (43%)
Query: 121 VLVTGAAGFVGSHCSLALKKRG---DGVL-GLDNFNSYYDPSLKRARQKLLQKHQVFIVE 176
+LVTGAAGF+GS L G D V+ LD +P A ++ H + E
Sbjct: 5 LLVTGAAGFIGSQYVRTLLGPGGPPDVVVTALDALTYAGNPDNLAA----VRGHPRYRFE 60
Query: 177 -GDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVN 235
GD+ DAP + V+HLAA++ V ++ + +V +N+ G LL+ +
Sbjct: 61 RGDICDAPGRRVMAGQ---DQVVHLAAESHVDRSLLDASVFVRTNVHGTQTLLDAATR-H 116
Query: 236 PQPSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGL 295
S V S+ VYG ++E +P S Y+A+K +G+ +A ++ +GL +
Sbjct: 117 GVASFVQVSTDEVYGSLEHGSWTEDEPL-RPNSPYSASKASGDLLALAHHVSHGLDVRVT 175
Query: 296 RFFTVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGALDT 355
R YGP P+ F ++ G + +Y D V R++ ++DD V+G + A+ T
Sbjct: 176 RCSNNYGPRQFPEKLIPRFITLLMDGHRVPLYG--DGLNV-REWLHVDDHVRG-IEAVRT 231
Query: 356 AXXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILENLLNTK-AKKHVIRMPRNGDVP 414
RVYN+G + + LV +L + + D
Sbjct: 232 RGRAG------------RVYNIGGGATLSNKELVGLLLEAAGADWGSVEYVEDRKGHDRR 279
Query: 415 YTHANVSLAYKDFGYKPTTDLAAGLRKFVKWY 446
Y + + ++ G+ P DLA GL V WY
Sbjct: 280 YAVDSTRIQ-RELGFAPAVDLADGLAATVAWY 310
>UNIPROTKB|A0QSK6 [details] [associations]
symbol:rmlB "dTDP-glucose 4,6-dehydratase" species:246196
"Mycobacterium smegmatis str. MC2 155" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=IGI] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=IGI]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000480 EMBL:CP001663
GenomeReviews:CP000480_GR GO:GO:0045226 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:YP_006566244.1 RefSeq:YP_885894.1 ProteinModelPortal:A0QSK6
SMR:A0QSK6 STRING:A0QSK6 EnsemblBacteria:EBMYCT00000041385
GeneID:13429291 GeneID:4531259 KEGG:msg:MSMEI_1476
KEGG:msm:MSMEG_1512 PATRIC:18075481 OMA:AYNDARY
BioCyc:MSME246196:GJ4Y-1512-MONOMER Uniprot:A0QSK6
Length = 331
Score = 187 (70.9 bits), Expect = 5.0e-13, Sum P(2) = 5.0e-13
Identities = 67/232 (28%), Positives = 114/232 (49%)
Query: 119 MTVLVTGAAGFVGSH-CSLALKK-RGDGVLGLDNFNSYYDPSLKRARQKLLQ-KHQVFIV 175
M +LVTG AGF+G++ LAL++ R + LD Y S R+ L ++ +V
Sbjct: 1 MRLLVTGGAGFIGANFVHLALREARTSSITVLDALT--YAGS----RESLAPVADRIRLV 54
Query: 176 EGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVN 235
+GD+ DA L+ L V V+H AA+ V A+ +P+ ++ SN+ G +LE + N
Sbjct: 55 QGDITDAALVGDL--VAESDAVVHFAAETHVDNALADPEPFLHSNVVGTYTILEAVRRHN 112
Query: 236 PQPSIVWASSSSVYG---LNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLAL 292
+ V S+ VYG L+ F+E+ + P+S Y++TK A + + + YG+
Sbjct: 113 VRLHHV--STDEVYGDLELDNPARFNETTPYN-PSSPYSSTKAAADLLVRAWVRSYGVRA 169
Query: 293 TGLRFFTVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDD 344
T YGP+ + ++L G+ +Y + RD+ ++DD
Sbjct: 170 TISNCSNNYGPYQHVEKFIPRQITNVLTGRRPKLYGAGAN---VRDWIHVDD 218
Score = 47 (21.6 bits), Expect = 5.0e-13, Sum P(2) = 5.0e-13
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 412 DVPYTHANVSLAYKDFGYKPT-TDLAAGLRKFVKWY 446
D+ Y + S + G+ P TD AGL + WY
Sbjct: 274 DLRYA-IDPSTLQDELGWAPKHTDFEAGLTDTIDWY 308
>UNIPROTKB|E2QWQ8 [details] [associations]
symbol:TGDS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 KO:K01710
PANTHER:PTHR10366:SF41 OMA:GFIASHM CTD:23483 EMBL:AAEX03013308
RefSeq:XP_542640.3 Ensembl:ENSCAFT00000008577 GeneID:485521
KEGG:cfa:485521 Uniprot:E2QWQ8
Length = 355
Score = 196 (74.1 bits), Expect = 5.8e-13, P = 5.8e-13
Identities = 80/336 (23%), Positives = 137/336 (40%)
Query: 121 VLVTGAAGFVGSHCSLALKKRGDG--VLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGD 178
+LVTG AGF+ SH ++L + ++ LD + Y SLK + + K ++GD
Sbjct: 20 LLVTGGAGFIASHVIVSLVEDYPNYMIINLDKLD--YCASLKNL-ETISNKQNYKFIQGD 76
Query: 179 LNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQP 238
+ ++ + LF+ VLH AAQ V + + N+ G L+ +
Sbjct: 77 ICNSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVSAAHEARVE- 135
Query: 239 SIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRFF 298
++ S+ VYG + F ES QP + YA++K A E +Y Y R
Sbjct: 136 KFIYVSTDEVYGGSLDKEFDESS-PKQPTNPYASSKAAAECFVQSYWERYKFPAVITRSS 194
Query: 299 TVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGALDTAXX 358
VYGP P+ F + + ++ + R+F Y DVV+ + L
Sbjct: 195 NVYGPHQYPEKVIPKFISLLQHNRKCCIHGSGLQ---TRNFLYATDVVEAFLTVLKKGK- 250
Query: 359 XXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAKK--------HVIRMPRN 410
P + +YN+G + V +L L L+ + + +V P N
Sbjct: 251 ----------PGE--IYNIGTNFEMSVLQLAKELIQLIKETSSESEMETWVDYVNDRPTN 298
Query: 411 GDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKWY 446
D+ Y + + + G++P G++K + WY
Sbjct: 299 -DMRYPMKSEKI--QGLGWRPKVPWKEGIKKTIDWY 331
>UNIPROTKB|Q9S642 [details] [associations]
symbol:rfbB1 "dTDP-glucose 4,6-dehydratase" species:122587
"Neisseria meningitidis Z2491" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
OMA:RAYRQQM EMBL:AL157959 GenomeReviews:AL157959_GR GO:GO:0045226
GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088
GO:GO:0019305 HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
EMBL:AF083467 PIR:G82014 RefSeq:YP_002341735.1
RefSeq:YP_002341747.1 ProteinModelPortal:Q9S642 SMR:Q9S642
EnsemblBacteria:EBNEIT00000000158 EnsemblBacteria:EBNEIT00000001121
GeneID:906204 GeneID:906218 KEGG:nma:NMA0189 KEGG:nma:NMA0204
PATRIC:20360960 ProtClustDB:CLSK877380
BioCyc:NMEN122587:GI3Q-220-MONOMER
BioCyc:NMEN122587:GI3Q-233-MONOMER Uniprot:Q9S642
Length = 341
Score = 195 (73.7 bits), Expect = 6.4e-13, P = 6.4e-13
Identities = 90/347 (25%), Positives = 151/347 (43%)
Query: 121 VLVTGAAGFVGSHCSL-ALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGDL 179
+LVTG AGF+GS ++ D V+ LD Y +L+ + + + D+
Sbjct: 4 ILVTGGAGFIGSAVVRHIIRNTQDSVVNLDKLT--YAGNLESLTD-IADNPRYAFEQVDI 60
Query: 180 NDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQ-P 238
D L ++F V+HLAA++ V ++ + ++ +NI G NLLE ++ Q P
Sbjct: 61 CDRAELDRVFAQHRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAARAYRQQMP 120
Query: 239 S-------IVWASSSSVYG-LN-TQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYG 289
S S+ VYG L+ T F+E+ P+S Y+A+K + + + + YG
Sbjct: 121 SEKHEAFRFHHISTDEVYGDLSGTDDLFTET-APYAPSSPYSASKASSDHLVRAWLRTYG 179
Query: 290 LALTGLRFFTVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDD----- 344
L YGP+ P+ + L GK + VY D ++ RD+ +++D
Sbjct: 180 LPTIVTNCSNNYGPYHFPEKLIPLMILNALDGKPLPVYG--DGMQI-RDWLFVEDHARAL 236
Query: 345 ---VVKGCVGALDTAXXXXXXXXXXXXPAQLRVYNLGNTSPV-PVGRLVSILENLLNTKA 400
V +G VG +T + L +P P G V+ E+L+
Sbjct: 237 YQVVTEGVVG--ETYNIGGHNEKANIEVVKTICALLEELAPEKPAG--VARYEDLIT--- 289
Query: 401 KKHVIRMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKWYV 447
V P + D Y + + +D G++P +GLRK V+WY+
Sbjct: 290 --FVQDRPGH-DARYA-VDTAKIRRDLGWQPLETFESGLRKTVQWYL 332
>SGD|S000000223 [details] [associations]
symbol:GAL10 "UDP-glucose-4-epimerase" species:4932
"Saccharomyces cerevisiae" [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0004034 "aldose 1-epimerase activity"
evidence=IEA;IDA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0016853
"isomerase activity" evidence=IEA] [GO:0006012 "galactose metabolic
process" evidence=IEA] [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IMP;IDA] [GO:0033499 "galactose catabolic process via
UDP-galactose" evidence=IMP;IDA] [GO:0019318 "hexose metabolic
process" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008152 "metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0030246 "carbohydrate binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008183 InterPro:IPR011013 InterPro:IPR014718
Pfam:PF01263 Pfam:PF01370 UniPathway:UPA00214 UniPathway:UPA00242
InterPro:IPR016040 SGD:S000000223 GO:GO:0005829 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0030246 EMBL:BK006936
GO:GO:0044237 SUPFAM:SSF74650 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
Gene3D:2.70.98.10 eggNOG:COG2017 HOGENOM:HOG000247896 KO:K15917
OMA:CKDLWKW OrthoDB:EOG4NKG3T GO:GO:0004034 GO:GO:0033499
InterPro:IPR018052 PROSITE:PS00545 EMBL:Z35888 EMBL:X81324
EMBL:K02115 EMBL:M12348 EMBL:K01609 PIR:S45875 RefSeq:NP_009575.1
PDB:1Z45 PDBsum:1Z45 ProteinModelPortal:P04397 SMR:P04397
DIP:DIP-4891N MINT:MINT-526001 STRING:P04397 PeptideAtlas:P04397
PRIDE:P04397 EnsemblFungi:YBR019C GeneID:852307 KEGG:sce:YBR019C
CYGD:YBR019c GeneTree:ENSGT00530000063128 EvolutionaryTrace:P04397
NextBio:970981 Genevestigator:P04397 GermOnline:YBR019C
Uniprot:P04397
Length = 699
Score = 201 (75.8 bits), Expect = 7.9e-13, P = 7.9e-13
Identities = 81/245 (33%), Positives = 116/245 (47%)
Query: 121 VLVTGAAGFVGSHCSLALKKRGDGVLGLDNF-NSYYDPSLKRARQKLLQKHQVFIVEGDL 179
VLVTG AG++GSH + L + G + DN NS YD S+ AR ++L KH + E DL
Sbjct: 14 VLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYD-SV--ARLEVLTKHHIPFYEVDL 70
Query: 180 NDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQPS 239
D L K+F V+H A V + Q P Y +NI G V LLE+ + N
Sbjct: 71 CDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVS-K 129
Query: 240 IVWASSSSVYGLNTQ----VPFSESHRTDQPASLYAATKKAGEEIAHT-YNH---IYGLA 291
V++SS++VYG T+ +P E P + Y TK A E I + YN + A
Sbjct: 130 FVFSSSATVYGDATRFPNMIPIPEECPLG-PTNPYGHTKYAIENILNDLYNSDKKSWKFA 188
Query: 292 LTGLRFFTVYG----------PWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTY 341
+ LR+F G P G P+ + + + G+ +Y DD + +RD T
Sbjct: 189 I--LRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQ-VAVGRREKLYIFGDDYD-SRDGTP 244
Query: 342 IDDVV 346
I D +
Sbjct: 245 IRDYI 249
>UNIPROTKB|P26391 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:99287
"Salmonella enterica subsp. enterica serovar Typhimurium str. LT2"
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=ISS]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=ISS] [GO:0070404 "NADH binding" evidence=IDA]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
Gene3D:3.40.50.720 EMBL:AE006468 EMBL:X56793
GenomeReviews:AE006468_GR GO:GO:0009103 GO:GO:0070404 GO:GO:0045226
GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088
GO:GO:0019305 HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
PANTHER:PTHR10366:SF41 OMA:AKKAFRF PIR:S15299 RefSeq:NP_461042.1
PDB:1G1A PDB:1KEU PDB:1KEW PDBsum:1G1A PDBsum:1KEU PDBsum:1KEW
ProteinModelPortal:P26391 SMR:P26391 PRIDE:P26391 GeneID:1253618
KEGG:stm:STM2097 PATRIC:32382777 EvolutionaryTrace:P26391
Uniprot:P26391
Length = 361
Score = 195 (73.7 bits), Expect = 8.1e-13, P = 8.1e-13
Identities = 79/349 (22%), Positives = 148/349 (42%)
Query: 119 MTVLVTGAAGFVGSHCSL-ALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEG 177
M +L+TG AGF+GS +K D V+ +D Y +L+ + + + ++
Sbjct: 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLT--YAGNLE-SLSDISESNRYNFEHA 57
Query: 178 DLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSV--- 234
D+ D+ +T++F+ V+HLAA++ V ++ P +++ +NI G LLEV +
Sbjct: 58 DICDSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSA 117
Query: 235 ---NPQPSIVW--ASSSSVYG-L--------NTQVPFSESHRTDQPASLYAATKKAGEEI 280
+ + + + S+ VYG L + +P P+S Y+A+K + + +
Sbjct: 118 LGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHL 177
Query: 281 AHTYNHIYGLALTGLRFFTVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFT 340
+ YGL YGP+ P+ + L+GK + +Y D RD+
Sbjct: 178 VRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQ---IRDWL 234
Query: 341 YIDDVVKGCVGALDTAXXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILENLLNTKA 400
Y++D + AL NL + L I+ + +
Sbjct: 235 YVEDHAR----ALHMVVTEGKAGETYNIGGHNEKKNLDVVFTI-CDLLDEIVPKATSYRE 289
Query: 401 K-KHVIRMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKWYVS 448
+ +V P + D Y + ++ G+KP +G+RK V+WY++
Sbjct: 290 QITYVADRPGH-DRRYA-IDAGKISRELGWKPLETFESGIRKTVEWYLA 336
>TIGR_CMR|GSU_2366 [details] [associations]
symbol:GSU_2366 "dTDP-glucose 4,6-dehydratase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0019305
"dTDP-rhamnose biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0008460
TIGRFAMs:TIGR01181 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 HSSP:P26391 OMA:IQYVKDR RefSeq:NP_953413.1
ProteinModelPortal:Q74AI8 SMR:Q74AI8 GeneID:2686639
KEGG:gsu:GSU2366 PATRIC:22027581 ProtClustDB:CLSK828808
BioCyc:GSUL243231:GH27-2368-MONOMER Uniprot:Q74AI8
Length = 358
Score = 194 (73.4 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 64/232 (27%), Positives = 108/232 (46%)
Query: 121 VLVTGAAGFVGSHCSLALKKRGDG--VLGLDNFNSYYDPSLKRARQKLLQKHQVF-IVEG 177
VLVTG AGF+GS+ G V+ LD Y +L+ ++++ + V+G
Sbjct: 10 VLVTGGAGFIGSNFINHFLPANPGCRVINLDILT--YAGNLRNLTA--VEQNPAYRFVKG 65
Query: 178 DLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQ 237
D+ DA L+ ++ V+H AA++ V ++ P+ +V +N+ G LLE +
Sbjct: 66 DIGDADLVRRILAEERIDAVVHFAAESHVDRSILGPEIFVRTNVLGTQVLLEESRRHWES 125
Query: 238 PSI-----VWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLAL 292
+I + S+ VYG + + P S Y+A+K + + YN +GL +
Sbjct: 126 GAIERFRFLHVSTDEVYGTLGETGYFTEETPLAPNSPYSASKAGSDLLVRAYNETFGLPV 185
Query: 293 TGLRFFTVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDD 344
R YGP+ P+ +I+ GK + VY D R V RD+ ++ D
Sbjct: 186 LTTRCSNNYGPFQFPEKLIPLMIHNIVAGKPLPVYG--DGRNV-RDWLHVKD 234
>UNIPROTKB|O06329 [details] [associations]
symbol:rmlB "dTDP-glucose 4,6-dehydratase" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IGI;IDA] [GO:0019305 "dTDP-rhamnose biosynthetic process"
evidence=IDA] [GO:0040007 "growth" evidence=IDA;IMP] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IGI]
[GO:0070404 "NADH binding" evidence=ISS] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 UniPathway:UPA00124
InterPro:IPR016040 GO:GO:0040007 GO:GO:0005618 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
Gene3D:3.40.50.720 EMBL:BX842583 GO:GO:0070404 GO:GO:0045226
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:AYNDARY
PIR:E70566 RefSeq:NP_217981.1 RefSeq:NP_338096.1
RefSeq:YP_006516953.1 HSSP:P95780 ProteinModelPortal:O06329
SMR:O06329 PRIDE:O06329 EnsemblBacteria:EBMYCT00000003518
EnsemblBacteria:EBMYCT00000071206 GeneID:13317071 GeneID:887332
GeneID:926625 KEGG:mtc:MT3570 KEGG:mtu:Rv3464 KEGG:mtv:RVBD_3464
PATRIC:18129579 TubercuList:Rv3464 ProtClustDB:CLSK792508
Uniprot:O06329
Length = 331
Score = 184 (69.8 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 64/232 (27%), Positives = 113/232 (48%)
Query: 119 MTVLVTGAAGFVGSHC--SLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQ-KHQVFIV 175
M +LVTG AGF+G++ S + D V LD +Y R+ L + + +V
Sbjct: 1 MRLLVTGGAGFIGTNFVHSAVREHPDDAVTVLDAL-TYAG-----RRESLADVEDAIRLV 54
Query: 176 EGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVN 235
+GD+ DA L+++L V V+H AA++ V A+ NP+ ++ +N+ G +LE +
Sbjct: 55 QGDITDAELVSQL--VAESDAVVHFAAESHVDNALDNPEPFLHTNVIGTFTILEAVRRHG 112
Query: 236 PQPSIVWASSSSVYG---LNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLAL 292
+ + S+ VYG L+ + F+ES + P+S Y+ATK + + + YG+
Sbjct: 113 VRLHHI--STDEVYGDLELDDRARFTESTPYN-PSSPYSATKAGADMLVRAWVRSYGVRA 169
Query: 293 TGLRFFTVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDD 344
T YGP+ + ++L G+ +Y + RD+ ++DD
Sbjct: 170 TISNCSNNYGPYQHVEKFIPRQITNVLTGRRPKLYGAGAN---VRDWIHVDD 218
Score = 47 (21.6 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 412 DVPYTHANVSLAYKDFGYKPT-TDLAAGLRKFVKWY 446
D+ Y + S Y + + P TD GLR + WY
Sbjct: 274 DLRYA-IDPSTLYDELCWAPKHTDFEEGLRTTIDWY 308
>UNIPROTKB|P55294 [details] [associations]
symbol:rfbB1 "dTDP-glucose 4,6-dehydratase" species:122586
"Neisseria meningitidis MC58" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
EMBL:AE002098 GenomeReviews:AE002098_GR GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
ProtClustDB:CLSK877380 EMBL:L09188 PIR:G81242 PIR:S42431
RefSeq:NP_273127.1 RefSeq:NP_273142.1 ProteinModelPortal:P55294
SMR:P55294 EnsemblBacteria:EBNEIT00000009034
EnsemblBacteria:EBNEIT00000009474 GeneID:902170 GeneID:902183
KEGG:nme:NMB0063 KEGG:nme:NMB0079 PATRIC:20355131 OMA:ARSWWNT
BioCyc:NMEN122586:GHGG-64-MONOMER BioCyc:NMEN122586:GHGG-80-MONOMER
Uniprot:P55294
Length = 355
Score = 192 (72.6 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 91/347 (26%), Positives = 150/347 (43%)
Query: 121 VLVTGAAGFVGSHCSL-ALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGDL 179
+LVTG AGF+GS ++ D V+ +D Y +L+ + F + D+
Sbjct: 4 ILVTGGAGFIGSAVVRHIIRNTRDAVVNVDKLT--YAGNLESLTEVADNPRYAF-EQVDI 60
Query: 180 NDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQ-P 238
D L ++F V+HLAA++ V ++ + ++ +NI G NLLE ++ Q P
Sbjct: 61 CDRAELDRVFAQYRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAARAYWQQMP 120
Query: 239 S-------IVWASSSSVYG-LN-TQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYG 289
S S+ VYG L T F+E+ P+S Y+A+K + + + + YG
Sbjct: 121 SEQHEAFRFHHISTDEVYGDLGGTDDLFTET-APYAPSSPYSASKASSDHLVRAWLRTYG 179
Query: 290 LALTGLRFFTVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDD----- 344
L YGP+ P+ + L GK + VY D ++ RD+ +++D
Sbjct: 180 LPTIVTNCSNNYGPYHFPEKLIPLMILNALDGKPLPVYG--DGMQI-RDWLFVEDHARAL 236
Query: 345 ---VVKGCVGALDTAXXXXXXXXXXXXPAQLRVYNLGNTSPV-PVGRLVSILENLLNTKA 400
V +G VG +T + L +P P G V+ E+L+
Sbjct: 237 YQVVTEGVVG--ETYNIGGHNEKANIEVVKTICALLEELAPEKPAG--VARYEDLIT--- 289
Query: 401 KKHVIRMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKWYV 447
V P + DV Y + + +D G+ P +GLRK V+WY+
Sbjct: 290 --FVQDRPGH-DVRYA-VDAAKIRRDLGWLPLETFESGLRKTVQWYL 332
>TAIR|locus:2078206 [details] [associations]
symbol:UXS5 "UDP-XYL synthase 5" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0042732 "D-xylose metabolic process"
evidence=RCA;TAS] [GO:0048040 "UDP-glucuronate decarboxylase
activity" evidence=ISS] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009744 "response to sucrose stimulus" evidence=RCA]
[GO:0009749 "response to glucose stimulus" evidence=RCA]
[GO:0009750 "response to fructose stimulus" evidence=RCA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0005829
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0042732
EMBL:AL133298 HSSP:P27830 HOGENOM:HOG000168004 EMBL:AY072098
EMBL:AY096586 EMBL:AY087118 EMBL:AK228600 EMBL:AK317497
IPI:IPI00534151 PIR:T45701 RefSeq:NP_001030820.1 RefSeq:NP_190228.1
UniGene:At.43598 ProteinModelPortal:Q9SN95 SMR:Q9SN95 STRING:Q9SN95
PRIDE:Q9SN95 EnsemblPlants:AT3G46440.1 EnsemblPlants:AT3G46440.2
GeneID:823794 KEGG:ath:AT3G46440 TAIR:At3g46440 InParanoid:Q9SN95
OMA:QISTQNR PhylomeDB:Q9SN95 ProtClustDB:CLSN2683686
ArrayExpress:Q9SN95 Genevestigator:Q9SN95 Uniprot:Q9SN95
Length = 341
Score = 189 (71.6 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 82/332 (24%), Positives = 142/332 (42%)
Query: 117 NGMTVLVTGAAGFVGSHC-SLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIV 175
+ M +L++G AGF+GSH ++ + V+ DN+ + +LK K + + ++
Sbjct: 27 SNMRILISGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLK----KWIGHPRFELI 82
Query: 176 EGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVN 235
D+ + PLL ++ + HLA A + NP + +N+ G +N+L + K V
Sbjct: 83 RHDVTE-PLLIEV------DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG 135
Query: 236 PQPSIVWASSSSVYGLNTQVPFSESHRTD-QPA---SLYAATKKAGEEIAHTYNHIYGLA 291
+ I+ S+S VYG P ES+ + P S Y K+ E + Y+ +G+
Sbjct: 136 AR--ILLTSTSEVYGDPLIHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIE 193
Query: 292 LTGLRFFTVYGPWGRPDMAYFF--FTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGC 349
+ R F YGP D F L+G+ + V K R F Y+ D+V G
Sbjct: 194 IRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEALTVQKPGTQ---TRSFCYVSDMVDGL 250
Query: 350 VGALDTAXXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAKKHVIRMPR 409
+ ++ P N+GN + L ++ L+N + I+M
Sbjct: 251 MRLME---------GDDTGPI-----NIGNPGEFTMVELAETVKELINPSIE---IKMVE 293
Query: 410 NG-DVPYTHA-NVSLAYKDFGYKPTTDLAAGL 439
N D P +++ A + G++P L GL
Sbjct: 294 NTPDDPRQRKPDITKAKEVLGWEPKVKLREGL 325
>TAIR|locus:2053275 [details] [associations]
symbol:UXS6 "UDP-XYL synthase 6" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM;IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0042732 "D-xylose metabolic process"
evidence=RCA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005886 GO:GO:0003824 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
EMBL:AC005727 HSSP:P27830 HOGENOM:HOG000168004 OMA:LGHENFE
ProtClustDB:CLSN2683686 EMBL:AY099703 EMBL:AY128899 IPI:IPI00536112
PIR:F84688 RefSeq:NP_001077972.1 RefSeq:NP_180443.1
RefSeq:NP_973555.1 UniGene:At.38572 ProteinModelPortal:Q9ZV36
SMR:Q9ZV36 STRING:Q9ZV36 PRIDE:Q9ZV36 EnsemblPlants:AT2G28760.1
EnsemblPlants:AT2G28760.2 EnsemblPlants:AT2G28760.3 GeneID:817426
KEGG:ath:AT2G28760 TAIR:At2g28760 InParanoid:Q9ZV36
PhylomeDB:Q9ZV36 ArrayExpress:Q9ZV36 Genevestigator:Q9ZV36
Uniprot:Q9ZV36
Length = 343
Score = 189 (71.6 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 65/245 (26%), Positives = 112/245 (45%)
Query: 117 NGMTVLVTGAAGFVGSHC-SLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIV 175
+ M +LVTG AGF+GSH ++ + V+ DN+ + +LK K + + ++
Sbjct: 29 SNMRILVTGGAGFIGSHLVDKLMQNEKNEVIVADNYFTGSKDNLK----KWIGHPRFELI 84
Query: 176 EGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVN 235
D+ + PL ++ + HLA A + NP + +N+ G +N+L + K V
Sbjct: 85 RHDVTE-PLFVEV------DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG 137
Query: 236 PQPSIVWASSSSVYGLNTQVPFSESHRTD-QPA---SLYAATKKAGEEIAHTYNHIYGLA 291
+ I+ S+S VYG P +ES+ + P S Y K+ E + Y+ +G+
Sbjct: 138 AR--ILLTSTSEVYGDPLVHPQTESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIE 195
Query: 292 LTGLRFFTVYGPWGRPDMAYFF--FTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGC 349
+ R F YGP D F L+G+ + V K R F Y+ D+V+G
Sbjct: 196 IRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEALTVQKPGTQ---TRSFCYVSDMVEGL 252
Query: 350 VGALD 354
+ ++
Sbjct: 253 MRLME 257
>UNIPROTKB|P27830 [details] [associations]
symbol:rffG "dTDP-glucose 4,6-dehydratase 2" species:83333
"Escherichia coli K-12" [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0019305 "dTDP-rhamnose biosynthetic process" evidence=IEA]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=IDA] [GO:0009103 "lipopolysaccharide biosynthetic process"
evidence=IEA;IDA] [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=IEA;IDA] [GO:0009243 "O antigen biosynthetic
process" evidence=IEA] InterPro:IPR001509 InterPro:IPR005888
Pfam:PF01370 UniPathway:UPA00124 UniPathway:UPA00281
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0009103 EMBL:M87049 OMA:RAYRQQM
GO:GO:0045226 GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181
eggNOG:COG1088 GO:GO:0019305 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 PIR:G65182 RefSeq:YP_026255.1
RefSeq:YP_491651.1 PDB:1BXK PDBsum:1BXK ProteinModelPortal:P27830
SMR:P27830 PRIDE:P27830 EnsemblBacteria:EBESCT00000002573
EnsemblBacteria:EBESCT00000015511 GeneID:12933083 GeneID:948300
KEGG:ecj:Y75_p3387 KEGG:eco:b3788 PATRIC:32123069 EchoBASE:EB1422
EcoGene:EG11453 ProtClustDB:PRK10217
BioCyc:EcoCyc:DTDPGLUCDEHYDRAT2-MONOMER
BioCyc:ECOL316407:JW5598-MONOMER
BioCyc:MetaCyc:DTDPGLUCDEHYDRAT2-MONOMER EvolutionaryTrace:P27830
Genevestigator:P27830 Uniprot:P27830
Length = 355
Score = 189 (71.6 bits), Expect = 3.7e-12, P = 3.7e-12
Identities = 79/346 (22%), Positives = 148/346 (42%)
Query: 121 VLVTGAAGFVGSHC-SLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGDL 179
+L+TG AGF+GS + + D V+ +D Y +L + + Q + + D+
Sbjct: 4 ILITGGAGFIGSALVRYIINETSDAVVVVDKLT--YAGNLM-SLAPVAQSERFAFEKVDI 60
Query: 180 NDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQPS 239
D L ++F V+HLAA++ V ++ P +++ +NI G LLE ++ +
Sbjct: 61 CDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALT 120
Query: 240 IVWASSSSVYGLNTQVPFSESHRTDQ---------PASLYAATKKAGEEIAHTYNHIYGL 290
S+ + ++T + + H TD P+S Y+A+K + + + + YGL
Sbjct: 121 EDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYGL 180
Query: 291 ALTGLRFFTVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCV 350
YGP+ P+ + L GK++ VY + +++ RD+ Y++D +
Sbjct: 181 PTLITNCSNNYGPYHFPEKLIPLMILNALAGKSLPVYG--NGQQI-RDWLYVEDHARALY 237
Query: 351 GALDTAXXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAK-----KHVI 405
T + +N V V + +LE L K + +I
Sbjct: 238 CVATTGKVGETY--------NIGGHNERKNLDV-VETICELLEELAPNKPHGVAHYRDLI 288
Query: 406 RM--PRNG-DVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKWYVS 448
R G D+ Y + S ++ G+ P +G+RK V+WY++
Sbjct: 289 TFVADRPGHDLRYA-IDASKIARELGWLPQETFESGMRKTVQWYLA 333
>UNIPROTKB|Q0C421 [details] [associations]
symbol:HNE_0794 "Putative GDP-6-deoxy-D-lyxo-4-hexulose
reductase" species:228405 "Hyphomonas neptunium ATCC 15444"
[GO:0000271 "polysaccharide biosynthetic process" evidence=ISS]
[GO:0003824 "catalytic activity" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0003824 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 EMBL:CP000158 GenomeReviews:CP000158_GR
GO:GO:0000271 GO:GO:0016857 HOGENOM:HOG000167992 OMA:NLLEACA
RefSeq:YP_759522.1 ProteinModelPortal:Q0C421 STRING:Q0C421
GeneID:4288576 KEGG:hne:HNE_0794 PATRIC:32214396
BioCyc:HNEP228405:GI69-836-MONOMER Uniprot:Q0C421
Length = 324
Score = 187 (70.9 bits), Expect = 4.4e-12, P = 4.4e-12
Identities = 87/323 (26%), Positives = 135/323 (41%)
Query: 118 GMTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLL--QKHQVFIV 175
G +L+TGA GFVG + L G + + ++ A Q L Q H+
Sbjct: 3 GRRILITGANGFVGGYMIRELVAAGY------QHSELHTLTVSGAEQSLRIGQAHRC--- 53
Query: 176 EGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVN 235
DL D+ + +L V T ++HLAA A A +P + A N L E + +
Sbjct: 54 --DLRDSASIHRLLQEVQPTGIVHLAAIALPSQAKADPSAAWAVNFEAVRQLGEAVLACS 111
Query: 236 PQPSIVWASSSSVYG--LNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALT 293
P +V+A SS YG NT +P + YAATK A + +A GL
Sbjct: 112 PHAVLVFAGSSESYGASFNTVAGAVNEGTALRPLTPYAATKAAAD-VALGQMRNDGLNAV 170
Query: 294 GLRFFTVYGPWGRPDMAYFFFTKDILQ---GKTIDVYKTQDDREVARDFTYIDDVVKGCV 350
R F GP PD F I Q G V + + + RDF + DVV+G
Sbjct: 171 RFRAFNHTGPGQSPDYVVASFAAQIAQIIAGDHPPVIRV-GNLDAMRDFVDVRDVVRGYR 229
Query: 351 GALDTAXXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILENL--LNTKAKKHVIRMP 408
AL+T P V+NL + +P + +++ L ++ ++ + ++
Sbjct: 230 LALETELD----------PVSEGVFNLASGTPRSIRSILNTLIDIAGVDIAIETDPAKLR 279
Query: 409 RNGDVPYTHANVSLAYKDFGYKP 431
+N DVP T + + A + G+ P
Sbjct: 280 KN-DVPRTWGDANRARTELGWVP 301
>DICTYBASE|DDB_G0275295 [details] [associations]
symbol:galE "UDP-glucose 4-epimerase" species:44689
"Dictyostelium discoideum" [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0016857 "racemase and epimerase activity, acting
on carbohydrates and derivatives" evidence=IEA] [GO:0006012
"galactose metabolic process" evidence=IEA] [GO:0005975
"carbohydrate metabolic process" evidence=IEA] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016853 "isomerase activity" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
UniPathway:UPA00214 InterPro:IPR016040 dictyBase:DDB_G0275295
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GenomeReviews:CM000151_GR EMBL:AAFI02000013 GO:GO:0044237
eggNOG:COG1087 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:P04397 OMA:ADKAWNA RefSeq:XP_643834.1
ProteinModelPortal:Q553X7 SMR:Q553X7 STRING:Q553X7
EnsemblProtists:DDB0231575 GeneID:8619881 KEGG:ddi:DDB_G0275295
ProtClustDB:CLSZ2729193 Uniprot:Q553X7
Length = 344
Score = 186 (70.5 bits), Expect = 7.3e-12, P = 7.3e-12
Identities = 88/346 (25%), Positives = 147/346 (42%)
Query: 121 VLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQ---KLLQKHQVFIVEG 177
++VTG AG++GSH + L + G + +DN ++ ++KR K ++ H V
Sbjct: 8 IMVTGGAGYIGSHTVIELIEAGYTPVIVDNLSNSSLEAIKRVESITGKEIEFHHV----- 62
Query: 178 DLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQ 237
D+ + L ++F+ V+H A V + + P Y +NIAG + LL + +
Sbjct: 63 DIMNEKALDEIFETGNIRSVIHFAGLKAVGESNKLPLKYYNNNIAGTLTLLNLMDKHRVK 122
Query: 238 PSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTY---NHIYGLALTG 294
+V++SS++VYG VP +E + Y TK E I + + +
Sbjct: 123 -KLVFSSSATVYGDPHTVPITEDFPLSA-TNPYGRTKLYVEGILQDLCASDPEWNCIM-- 178
Query: 295 LRFFTVYG--PWGR--------PDMAYFFFTKDILQGKTI-----DVYKTQDDREVARDF 339
LR+F G P G P+ + T+ + + I + Y T D V RDF
Sbjct: 179 LRYFNPVGAHPSGLIGEDPKDIPNNLMPYVTQTAIGKRPILSIFGNDYNTPDGTGV-RDF 237
Query: 340 TYIDDVVKGCVGALDTAXXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILENLLNTK 399
++ D+ KG + AL + YNLG V +V L+ + +
Sbjct: 238 IHVVDLAKGHISALSSLHSKKQGCVA---------YNLGTGRGYSVLEMVGALKQASHKE 288
Query: 400 AKKHVIRMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKW 445
++ R GDV + A+ S A K+ G+K T + R KW
Sbjct: 289 IPYQIVSR-RKGDVASSFADPSKALKELGWKATHNQDDMCRDAWKW 333
>UNIPROTKB|P37759 [details] [associations]
symbol:rfbB "RmlB" species:83333 "Escherichia coli K-12"
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0019305 "dTDP-rhamnose biosynthetic process" evidence=IEA]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=ISS] [GO:0016829 "lyase activity" evidence=IEA]
[GO:0009103 "lipopolysaccharide biosynthetic process"
evidence=IEA;ISS] [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=IEA;ISS] [GO:0009243 "O antigen biosynthetic
process" evidence=IEA] InterPro:IPR001509 InterPro:IPR005888
Pfam:PF01370 UniPathway:UPA00124 UniPathway:UPA00281
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0009103 OMA:KWWSRVL EMBL:U09876
GO:GO:0045226 GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181
GO:GO:0019305 PIR:H64969 RefSeq:NP_416545.1 RefSeq:YP_490283.1
ProteinModelPortal:P37759 SMR:P37759 DIP:DIP-10680N IntAct:P37759
MINT:MINT-1302103 PRIDE:P37759 EnsemblBacteria:EBESCT00000003521
EnsemblBacteria:EBESCT00000014484 GeneID:12930685 GeneID:945276
KEGG:ecj:Y75_p2004 KEGG:eco:b2041 PATRIC:32119415 EchoBASE:EB2311
EcoGene:EG12412 HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
BioCyc:EcoCyc:DTDPGLUCDEHYDRAT-MONOMER
BioCyc:ECOL316407:JW2026-MONOMER
BioCyc:MetaCyc:DTDPGLUCDEHYDRAT-MONOMER Genevestigator:P37759
PANTHER:PTHR10366:SF41 Uniprot:P37759
Length = 361
Score = 120 (47.3 bits), Expect = 8.7e-12, Sum P(2) = 8.7e-12
Identities = 34/116 (29%), Positives = 57/116 (49%)
Query: 119 MTVLVTGAAGFVGSHCSL-ALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEG 177
M +LVTG AGF+GS + D V+ +D Y + + + VF
Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLT--YAGNRESLADVSDSERYVF-EHA 57
Query: 178 DLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKS 233
D+ DAP + ++F V+HLAA++ V ++ P +++ +NI G LLE ++
Sbjct: 58 DICDAPAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARN 113
Score = 113 (44.8 bits), Expect = 8.7e-12, Sum P(2) = 8.7e-12
Identities = 49/205 (23%), Positives = 84/205 (40%)
Query: 252 NTQ-VPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRFFTVYGPWGRPDMA 310
NT+ +P P+S Y+A+K + + + + YGL YGP+ P+
Sbjct: 148 NTEELPLFTETTAYAPSSPYSASKASSDHLVRAWKRTYGLPTIVTNCSNNYGPYHFPEKL 207
Query: 311 YFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGALDTAXXXXXXXXXXXXPA 370
+ L+GK + +Y D RD+ Y++D + AL T
Sbjct: 208 IPLVILNALEGKALPIYGKGDQ---IRDWLYVEDHAR----ALYTVVTEGKAG------- 253
Query: 371 QLRVYNLGNTSPVPVGRLVSILENLLNT---KAKKHVIRMPRNGDVPYTHANVSL-AYK- 425
YN+G + +V + +LL+ K K + ++ D P ++ A K
Sbjct: 254 --ETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGHDRRYAIDAEKI 311
Query: 426 --DFGYKPTTDLAAGLRKFVKWYVS 448
G+KP +G+RK V+WY+S
Sbjct: 312 GRALGWKPQETFESGIRKTVEWYLS 336
>WB|WBGene00005019 [details] [associations]
symbol:sqv-1 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0040025 "vulval development"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0060465 "pharynx development" evidence=IMP]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0009792
GO:GO:0002009 GO:GO:0005737 GO:GO:0018991 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0040025
GeneTree:ENSGT00530000063128 KO:K08678 GO:GO:0048040 EMBL:FO081016
EMBL:AY147933 PIR:T15892 RefSeq:NP_501418.1 UniGene:Cel.19768
ProteinModelPortal:G5EF65 SMR:G5EF65 EnsemblMetazoa:D2096.4.1
EnsemblMetazoa:D2096.4.2 GeneID:177631 KEGG:cel:CELE_D2096.4
CTD:177631 WormBase:D2096.4 OMA:FSEALIM NextBio:897688
Uniprot:G5EF65
Length = 467
Score = 187 (70.9 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 66/241 (27%), Positives = 107/241 (44%)
Query: 121 VLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGDLN 180
+L+TG AGFVGSH L G V+ LDN Y+ R+K ++ H + ++
Sbjct: 139 ILITGGAGFVGSHLVDKLMLDGHEVIALDN---YFT-----GRKKNVE-HWIGHPNFEMV 189
Query: 181 DAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQPSI 240
++ F V + HLA+ A + M NP + +N G +N+L + K V + ++
Sbjct: 190 HHDVVNPYF--VEVDQIYHLASPASPPHYMYNPVKTIKTNTLGTINMLGLAKRV--KATV 245
Query: 241 VWASSSSVYGLNTQVPFSESH----RTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLR 296
+ AS+S VYG P E++ T P + Y K+ E + YN + + R
Sbjct: 246 LLASTSEVYGDPEVHPQPETYWGHVNTIGPRACYDEGKRVAESLMVAYNKQENIKIRIAR 305
Query: 297 FFTVYGPWGRPDMAYFF--FTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGALD 354
F +GP + F LQ K I +Y R F Y+ D+V G + ++
Sbjct: 306 IFNTFGPRMHMNDGRVVSNFIIQALQDKPITIYGNGTQ---TRSFQYVTDLVDGLIKLMN 362
Query: 355 T 355
+
Sbjct: 363 S 363
Score = 144 (55.7 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 58/260 (22%), Positives = 104/260 (40%)
Query: 192 VPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQPSIVWASSSSVYGL 251
V + HLA+ A + M NP + +N G +N+L + K V + +++ AS+S VYG
Sbjct: 199 VEVDQIYHLASPASPPHYMYNPVKTIKTNTLGTINMLGLAKRV--KATVLLASTSEVYGD 256
Query: 252 NTQVPFSESH----RTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRFFTVYGPWGRP 307
P E++ T P + Y K+ E + YN + + R F +GP R
Sbjct: 257 PEVHPQPETYWGHVNTIGPRACYDEGKRVAESLMVAYNKQENIKIRIARIFNTFGP--RM 314
Query: 308 DMAYFFFTKD-ILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGALDTAXXXXXXXXXX 366
M + I+Q + R F Y+ D+V G + +++
Sbjct: 315 HMNDGRVVSNFIIQALQDKPITIYGNGTQTRSFQYVTDLVDGLIKLMNS---------NY 365
Query: 367 XXPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAKKHVIRMPRNGDVPYTHANVSLAYKD 426
P N+GN +G+ +I+ +L+ + V + D ++ A +
Sbjct: 366 SLPV-----NIGNPEEHTIGQFATIIRDLVPGSTSEIVNLESQQDDPQQRRPDIRRAAEQ 420
Query: 427 FGYKPTTDLAAGLRKFVKWY 446
+ P + GL K V ++
Sbjct: 421 ISWAPQVHMKDGLLKTVDYF 440
>UNIPROTKB|B3KV61 [details] [associations]
symbol:UXS1 "UDP-glucuronate decarboxylase 1, isoform
CRA_a" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040
GO:GO:0005739 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CH471127 GO:GO:0044237 EMBL:AC018878 HOVERGEN:HBG094144
GO:GO:0048040 IPI:IPI00658111 UniGene:Hs.469561 HGNC:HGNC:17729
EMBL:AK122696 SMR:B3KV61 STRING:B3KV61 Ensembl:ENST00000540130
Uniprot:B3KV61
Length = 363
Score = 183 (69.5 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 66/241 (27%), Positives = 107/241 (44%)
Query: 121 VLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGDLN 180
+L+TG AGFVGSH + L G V +DNF + KR + + ++ D+
Sbjct: 34 ILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFT----GRKRNVEHWIGHENFELINHDVV 89
Query: 181 DAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQPSI 240
+ PL ++ + HLA+ A M NP + +N G +N+L + K V + +
Sbjct: 90 E-PLYIEV------DQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--L 140
Query: 241 VWASSSSVYGLNTQVPFSESH----RTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLR 296
+ AS+S VYG P SE + P + Y K+ E + + Y G+ + R
Sbjct: 141 LLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVAR 200
Query: 297 FFTVYGPWGRPDMAYFF--FTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGALD 354
F +GP + F LQG+ + VY + R F Y+ D+V G V ++
Sbjct: 201 IFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQ---TRAFQYVSDLVNGLVALMN 257
Query: 355 T 355
+
Sbjct: 258 S 258
>WB|WBGene00018737 [details] [associations]
symbol:F53B1.4 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225 GO:GO:0040017
GeneTree:ENSGT00530000063128 EMBL:FO081052 GO:GO:0008460
eggNOG:COG1088 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 OMA:AYNDARY HSSP:P26391 PIR:T16444
RefSeq:NP_508390.1 UniGene:Cel.908 ProteinModelPortal:Q20697
SMR:Q20697 STRING:Q20697 PaxDb:Q20697 EnsemblMetazoa:F53B1.4
GeneID:180525 KEGG:cel:CELE_F53B1.4 UCSC:F53B1.4 CTD:180525
WormBase:F53B1.4 InParanoid:Q20697 NextBio:909738 Uniprot:Q20697
Length = 342
Score = 182 (69.1 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 87/352 (24%), Positives = 135/352 (38%)
Query: 121 VLVTGAAGFVGS-HCSLALKK-RGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGD 178
VL+TG GF+GS + + K + + D + S +++ + + VE
Sbjct: 11 VLITGGCGFIGSNYINFTFNKWKNTKFINYDKLA--FGASPLHVEKEIRESPRYKFVEAA 68
Query: 179 LNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLE--VCKSVNP 236
L D P L K V+H AA V + + + NI LLE V
Sbjct: 69 LEDQPTLIKTLQENEVDMVIHFAAITHVDESYSDRIGTIQDNIISTTTLLESIVNSPYKG 128
Query: 237 QPSIVWASSSSVYG--LNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTG 294
+V S+ VYG P SES P + YAA+K A E + +Y H Y L
Sbjct: 129 VKKLVHISTDEVYGDSFEDTTPKSESASLPNPTNPYAASKAACEMVIRSYWHSYKLPYVM 188
Query: 295 LRFFTVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGALD 354
+R VYGP FTK L GK Y D R + Y++D C A+
Sbjct: 189 VRMNNVYGPRQIHTKLIPKFTKLALDGKP---YPLMGDGLHTRSWMYVED----CSEAIT 241
Query: 355 TAXXXXXXXXXXXXPAQLRVYNLGNT---SPVPVGRLVSI-LENLLNTKAKKHVIR-MPR 409
+YN+G + + + +++ + LLN + +P
Sbjct: 242 RVALEGTLG---------EIYNIGTDFEMTNIELTKMIHFTVSKLLNREPTAPTFAPIP- 291
Query: 410 NGDVPYT----HANVSLAYKDFGYKPTTDLAAGLRKFVKWYVSYYGIQPRVK 457
D PY + + S G++ TT + GL K + +YV + R++
Sbjct: 292 --DRPYHDRRYYIDFSKIRNAMGWQCTTPFSEGLMKTIDYYVKLHVATARLQ 341
>UNIPROTKB|P37761 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:485
"Neisseria gonorrhoeae" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
GO:GO:0045226 GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181
GO:GO:0019305 PANTHER:PTHR10366:SF41 EMBL:Z32742 EMBL:Z21508
PIR:S47045 ProteinModelPortal:P37761 SMR:P37761 Uniprot:P37761
Length = 346
Score = 182 (69.1 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 84/346 (24%), Positives = 144/346 (41%)
Query: 121 VLVTGAAGFVGSHCSL-ALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGDL 179
+LVTG AGF+GS ++ D V+ LD Y +L+ + + + D+
Sbjct: 9 ILVTGGAGFIGSAVVRHIIQNTRDSVVNLDKLT--YAGNLESLTD-IADNPRYAFEQVDI 65
Query: 180 NDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQPS 239
D L ++F V+HLAA++ V A+ + ++ +NI G +LLE ++ Q
Sbjct: 66 CDRAELDRVFAQYRPDAVMHLAAESHVDRAIGSAGEFIRTNIVGTFDLLEAARAYWQQMP 125
Query: 240 IVWASSSSVYGLNTQVPFSESHRTDQ---------PASLYAATKKAGEEIAHTYNHIYGL 290
+ + ++T + + H TD P+S Y+A+K A + + + Y L
Sbjct: 126 SEKREAFRFHHISTDEVYGDLHGTDDLFTETTPYAPSSPYSASKAAADHLVRAWQRTYRL 185
Query: 291 ALTGLRFFTVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDD------ 344
YGP P+ + L GK + VY D ++ RD+ +++D
Sbjct: 186 PSIVSNCSNNYGPRQFPEKLIPLMILNALSGKPLPVYG--DGAQI-RDWLFVEDHARALY 242
Query: 345 --VVKGCVGALDTAXXXXXXXXXXXXPAQLRVYNLGNTSPV-PVGRLVSILENLLNTKAK 401
V +G VG +T + L +P P G V+ E+L+
Sbjct: 243 QVVTEGVVG--ETYNIGGHNEKTNLEVVKTICALLEELAPEKPAG--VARYEDLIT---- 294
Query: 402 KHVIRMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKWYV 447
V P + D Y + + +D G+ P +GLRK V+WY+
Sbjct: 295 -FVQDRPGH-DARYA-VDAAKIRRDLGWLPLETFESGLRKTVQWYL 337
>TIGR_CMR|GSU_2240 [details] [associations]
symbol:GSU_2240 "UDP-glucose 4-epimerase" species:243231
"Geobacter sulfurreducens PCA" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:P09147 RefSeq:NP_953289.1 ProteinModelPortal:Q74AW0
GeneID:2687202 KEGG:gsu:GSU2240 PATRIC:22027335 OMA:VEHARQG
ProtClustDB:CLSK828777 BioCyc:GSUL243231:GH27-2212-MONOMER
Uniprot:Q74AW0
Length = 326
Score = 181 (68.8 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 54/184 (29%), Positives = 85/184 (46%)
Query: 119 MTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGD 178
M VLVTG AG++GSH L + G V+ DN ++ + +L + +V GD
Sbjct: 1 MPVLVTGGAGYIGSHVVRQLSEAGYTVVVYDNLSTGFPDALVHGER---------LVTGD 51
Query: 179 LNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQP 238
L+D L LF F+ VLH AA ++ P Y +N +NLL C +
Sbjct: 52 LSDTARLDALFVEYGFSTVLHFAASIIAPESVTAPLKYYGNNTRNTLNLLGACVKHGVE- 110
Query: 239 SIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRFF 298
+++S+++VYG+ +E T P + Y +K E + +G+ LR+F
Sbjct: 111 RFIFSSTAAVYGIPDSGVAAEESAT-VPINPYGTSKLMSEWMLRDVCAAHGMRSVALRYF 169
Query: 299 TVYG 302
V G
Sbjct: 170 NVAG 173
>TIGR_CMR|CJE_1273 [details] [associations]
symbol:CJE_1273 "UDP-glucose 4-epimerase" species:195099
"Campylobacter jejuni RM1221" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0044237
eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 KO:K01784 RefSeq:YP_179261.1
ProteinModelPortal:Q5HTX4 STRING:Q5HTX4 GeneID:3231780
KEGG:cjr:CJE1273 PATRIC:20044342 OMA:MMSERIL ProtClustDB:CLSK879103
BioCyc:CJEJ195099:GJC0-1299-MONOMER Uniprot:Q5HTX4
Length = 328
Score = 181 (68.8 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 69/253 (27%), Positives = 107/253 (42%)
Query: 119 MTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVF-IVEG 177
M +L++G AG++GSH K + LDN + K A + L QK + F E
Sbjct: 1 MKILISGGAGYIGSHTLRQFLKTDHEICVLDNLSK----GSKIAIEDL-QKIRAFKFFEQ 55
Query: 178 DLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQ 237
DL+D + LF+ F ++H AA V +MQNP Y +N NL+E C
Sbjct: 56 DLSDFQGVKALFEREKFDAIVHFAASIEVFESMQNPLKYYMNNTVNTTNLIETCLQTGVN 115
Query: 238 PSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEI---AHTYNHIYGLALTG 294
+++S+++ YG Q P P + Y +K EE+ A N + +
Sbjct: 116 -KFIFSSTAATYG-EPQTPVVSETSPLAPINPYGRSKLMSEEVLRDASMANPEFKHCI-- 171
Query: 295 LRFFTVYGPW-----GR--PDMAYFF-FTKDILQGKTIDVYKTQDDREVA-----RDFTY 341
LR+F V G G+ P + GK ++ DD + RDF +
Sbjct: 172 LRYFNVAGACMDYTLGQRYPKATLLIKVAAECAAGKRDKLFIFGDDYDTKDGTCIRDFIH 231
Query: 342 IDDVVKGCVGALD 354
+DD+ + LD
Sbjct: 232 VDDISSAHLATLD 244
>CGD|CAL0000450 [details] [associations]
symbol:GAL102 species:5476 "Candida albicans" [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IC] [GO:0009272
"fungal-type cell wall biogenesis" evidence=IMP] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 CGD:CAL0000450
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0035690 GO:GO:0009272 EMBL:AACQ01000118 EMBL:AACQ01000119
GO:GO:0008460 eggNOG:COG1088 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:XP_713734.1 RefSeq:XP_713768.1 ProteinModelPortal:Q59VY4
STRING:Q59VY4 GeneID:3644585 GeneID:3644611 KEGG:cal:CaO19.11158
KEGG:cal:CaO19.3674 Uniprot:Q59VY4
Length = 320
Score = 180 (68.4 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 77/324 (23%), Positives = 139/324 (42%)
Query: 121 VLVTGAAGFVGSH--CSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGD 178
++V+G AGF+G H C + K +D N Y + + K + V D
Sbjct: 9 IVVSGGAGFIGIHFLCYMVKKYPNFHFTCIDKLN-YASNATEIENLKSFSNFE--FVHLD 65
Query: 179 LNDAPLLTKLFDVVP-FTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQ 237
L+D L L + T +++ AA++ V + ++P + +NI NLLE C +NP
Sbjct: 66 LSDN--LEYLLKITKNTTDIINFAAESSVDRSFKDPVYFTKNNILATQNLLE-CHRLNPS 122
Query: 238 PS-IVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLR 296
+ S+ VYG + ++ + P + Y+A+K A + I +Y + Y L +T LR
Sbjct: 123 IGYFLHISTDEVYG-DVYEGDNKENAVMNPTNPYSASKAAIDLIIKSYQYSYKLPITILR 181
Query: 297 FFTVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGALDTA 356
VYGP P+ + I + K I V+ ++ R + Y+ D+V A++T
Sbjct: 182 PNNVYGPLQYPEKIIPLTIQCINEKKPIPVHGKGTNK---RKYLYVLDIVL----AIETV 234
Query: 357 XXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAKKHVIRMPRNGDVPYT 416
++YN+G T + L+ ++ + + + I+ D Y+
Sbjct: 235 WIKNPMTTVN------QIYNIGGTDELDNLSLIKLIMEIFG-RGEIQFIKDRNYNDTNYS 287
Query: 417 HANVSLAYKDFGYKPTTDLAAGLR 440
+ + G+ P L GL+
Sbjct: 288 IDTTKI--HNLGWSPKISLVQGLQ 309
>UNIPROTKB|Q59VY4 [details] [associations]
symbol:TGD99 "Putative uncharacterized protein TGD99"
species:237561 "Candida albicans SC5314" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IC] [GO:0009272
"fungal-type cell wall biogenesis" evidence=IMP] [GO:0035690
"cellular response to drug" evidence=IMP] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 CGD:CAL0000450
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0035690 GO:GO:0009272 EMBL:AACQ01000118 EMBL:AACQ01000119
GO:GO:0008460 eggNOG:COG1088 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:XP_713734.1 RefSeq:XP_713768.1 ProteinModelPortal:Q59VY4
STRING:Q59VY4 GeneID:3644585 GeneID:3644611 KEGG:cal:CaO19.11158
KEGG:cal:CaO19.3674 Uniprot:Q59VY4
Length = 320
Score = 180 (68.4 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 77/324 (23%), Positives = 139/324 (42%)
Query: 121 VLVTGAAGFVGSH--CSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGD 178
++V+G AGF+G H C + K +D N Y + + K + V D
Sbjct: 9 IVVSGGAGFIGIHFLCYMVKKYPNFHFTCIDKLN-YASNATEIENLKSFSNFE--FVHLD 65
Query: 179 LNDAPLLTKLFDVVP-FTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQ 237
L+D L L + T +++ AA++ V + ++P + +NI NLLE C +NP
Sbjct: 66 LSDN--LEYLLKITKNTTDIINFAAESSVDRSFKDPVYFTKNNILATQNLLE-CHRLNPS 122
Query: 238 PS-IVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLR 296
+ S+ VYG + ++ + P + Y+A+K A + I +Y + Y L +T LR
Sbjct: 123 IGYFLHISTDEVYG-DVYEGDNKENAVMNPTNPYSASKAAIDLIIKSYQYSYKLPITILR 181
Query: 297 FFTVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGALDTA 356
VYGP P+ + I + K I V+ ++ R + Y+ D+V A++T
Sbjct: 182 PNNVYGPLQYPEKIIPLTIQCINEKKPIPVHGKGTNK---RKYLYVLDIVL----AIETV 234
Query: 357 XXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAKKHVIRMPRNGDVPYT 416
++YN+G T + L+ ++ + + + I+ D Y+
Sbjct: 235 WIKNPMTTVN------QIYNIGGTDELDNLSLIKLIMEIFG-RGEIQFIKDRNYNDTNYS 287
Query: 417 HANVSLAYKDFGYKPTTDLAAGLR 440
+ + G+ P L GL+
Sbjct: 288 IDTTKI--HNLGWSPKISLVQGLQ 309
>UNIPROTKB|F1PU61 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001509 InterPro:IPR021761
Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040 GO:GO:0005739
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 GO:GO:0048040 OMA:LGHENFE
EMBL:AAEX03007410 Ensembl:ENSCAFT00000003315 Uniprot:F1PU61
Length = 414
Score = 183 (69.5 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 66/241 (27%), Positives = 107/241 (44%)
Query: 121 VLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGDLN 180
+L+TG AGFVGSH + L G V +DNF + KR + + ++ D+
Sbjct: 85 ILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFT----GRKRNVEHWIGHENFELINHDVV 140
Query: 181 DAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQPSI 240
+ PL ++ + HLA+ A M NP + +N G +N+L + K V + +
Sbjct: 141 E-PLYIEV------DQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--L 191
Query: 241 VWASSSSVYGLNTQVPFSESH----RTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLR 296
+ AS+S VYG P SE + P + Y K+ E + + Y G+ + R
Sbjct: 192 LLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVAR 251
Query: 297 FFTVYGPWGRPDMAYFF--FTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGALD 354
F +GP + F LQG+ + VY + R F Y+ D+V G V ++
Sbjct: 252 IFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQ---TRAFQYVSDLVNGLVALMN 308
Query: 355 T 355
+
Sbjct: 309 S 309
>UNIPROTKB|Q8NBZ7 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0032580 "Golgi cisterna membrane"
evidence=IEA] [GO:0033320 "UDP-D-xylose biosynthetic process"
evidence=IEA] InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370
Pfam:PF11803 UniPathway:UPA00796 InterPro:IPR016040 GO:GO:0016021
GO:GO:0005739 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0032580 EMBL:AC018878 CTD:80146
HOGENOM:HOG000168004 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040
GO:GO:0033320 EMBL:AY147934 EMBL:AY358541 EMBL:AK027244
EMBL:AK075120 EMBL:AK075170 EMBL:BC009819 IPI:IPI00410544
IPI:IPI00657807 IPI:IPI00658111 RefSeq:NP_001240804.1
RefSeq:NP_001240805.1 RefSeq:NP_079352.2 UniGene:Hs.469561 PDB:2B69
PDB:4GLL PDBsum:2B69 PDBsum:4GLL ProteinModelPortal:Q8NBZ7
SMR:Q8NBZ7 IntAct:Q8NBZ7 STRING:Q8NBZ7 PhosphoSite:Q8NBZ7
DMDM:74730150 PaxDb:Q8NBZ7 PRIDE:Q8NBZ7 DNASU:80146
Ensembl:ENST00000283148 Ensembl:ENST00000409032
Ensembl:ENST00000409501 GeneID:80146 KEGG:hsa:80146 UCSC:uc002tdl.3
UCSC:uc002tdn.3 GeneCards:GC02M106709 H-InvDB:HIX0030285
HGNC:HGNC:17729 HPA:HPA008825 MIM:609749 neXtProt:NX_Q8NBZ7
PharmGKB:PA38465 OMA:LGHENFE EvolutionaryTrace:Q8NBZ7
GenomeRNAi:80146 NextBio:70422 ArrayExpress:Q8NBZ7 Bgee:Q8NBZ7
CleanEx:HS_UXS1 Genevestigator:Q8NBZ7 GermOnline:ENSG00000115652
Uniprot:Q8NBZ7
Length = 420
Score = 183 (69.5 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 66/241 (27%), Positives = 107/241 (44%)
Query: 121 VLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGDLN 180
+L+TG AGFVGSH + L G V +DNF + KR + + ++ D+
Sbjct: 91 ILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFT----GRKRNVEHWIGHENFELINHDVV 146
Query: 181 DAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQPSI 240
+ PL ++ + HLA+ A M NP + +N G +N+L + K V + +
Sbjct: 147 E-PLYIEV------DQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--L 197
Query: 241 VWASSSSVYGLNTQVPFSESH----RTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLR 296
+ AS+S VYG P SE + P + Y K+ E + + Y G+ + R
Sbjct: 198 LLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVAR 257
Query: 297 FFTVYGPWGRPDMAYFF--FTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGALD 354
F +GP + F LQG+ + VY + R F Y+ D+V G V ++
Sbjct: 258 IFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQ---TRAFQYVSDLVNGLVALMN 314
Query: 355 T 355
+
Sbjct: 315 S 315
>MGI|MGI:1915133 [details] [associations]
symbol:Uxs1 "UDP-glucuronate decarboxylase 1" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016829 "lyase activity"
evidence=IEA] [GO:0016831 "carboxy-lyase activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=ISO] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 UniPathway:UPA00796
InterPro:IPR016040 MGI:MGI:1915133 GO:GO:0016021 GO:GO:0005739
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0032580 GeneTree:ENSGT00530000063128 CTD:80146
HOVERGEN:HBG094144 KO:K08678 OrthoDB:EOG4ZW5B0 GO:GO:0048040
GO:GO:0033320 OMA:LGHENFE EMBL:AF399958 EMBL:AK075806 EMBL:AK152376
EMBL:BC037049 IPI:IPI00129252 RefSeq:NP_080706.1 UniGene:Mm.387202
ProteinModelPortal:Q91XL3 SMR:Q91XL3 STRING:Q91XL3
PhosphoSite:Q91XL3 PaxDb:Q91XL3 PRIDE:Q91XL3
Ensembl:ENSMUST00000126008 GeneID:67883 KEGG:mmu:67883
UCSC:uc007avq.1 InParanoid:Q91XL3 NextBio:325829 Bgee:Q91XL3
CleanEx:MM_UXS1 Genevestigator:Q91XL3 GermOnline:ENSMUSG00000057363
Uniprot:Q91XL3
Length = 420
Score = 183 (69.5 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 66/241 (27%), Positives = 107/241 (44%)
Query: 121 VLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGDLN 180
+L+TG AGFVGSH + L G V +DNF + KR + + ++ D+
Sbjct: 91 ILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFT----GRKRNVEHWIGHENFELINHDVV 146
Query: 181 DAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQPSI 240
+ PL ++ + HLA+ A M NP + +N G +N+L + K V + +
Sbjct: 147 E-PLYIEV------DQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--L 197
Query: 241 VWASSSSVYGLNTQVPFSESH----RTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLR 296
+ AS+S VYG P SE + P + Y K+ E + + Y G+ + R
Sbjct: 198 LLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVAR 257
Query: 297 FFTVYGPWGRPDMAYFF--FTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGALD 354
F +GP + F LQG+ + VY + R F Y+ D+V G V ++
Sbjct: 258 IFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQ---TRAFQYVSDLVNGLVALMN 314
Query: 355 T 355
+
Sbjct: 315 S 315
>RGD|628680 [details] [associations]
symbol:Uxs1 "UDP-glucuronate decarboxylase 1" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0032580 "Golgi cisterna membrane" evidence=IEA] [GO:0033320
"UDP-D-xylose biosynthetic process" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IDA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 UniPathway:UPA00796
InterPro:IPR016040 RGD:628680 GO:GO:0016021 GO:GO:0005794
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0032580
CTD:80146 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040 GO:GO:0033320
EMBL:AF482705 EMBL:BC086988 IPI:IPI00480702 RefSeq:NP_647552.1
UniGene:Rn.3037 ProteinModelPortal:Q5PQX0 SMR:Q5PQX0 PRIDE:Q5PQX0
GeneID:246232 KEGG:rno:246232 NextBio:623518 Genevestigator:Q5PQX0
Uniprot:Q5PQX0
Length = 420
Score = 183 (69.5 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 66/241 (27%), Positives = 107/241 (44%)
Query: 121 VLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGDLN 180
+L+TG AGFVGSH + L G V +DNF + KR + + ++ D+
Sbjct: 91 ILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFT----GRKRNVEHWIGHENFELINHDVV 146
Query: 181 DAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQPSI 240
+ PL ++ + HLA+ A M NP + +N G +N+L + K V + +
Sbjct: 147 E-PLYIEV------DQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--L 197
Query: 241 VWASSSSVYGLNTQVPFSESH----RTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLR 296
+ AS+S VYG P SE + P + Y K+ E + + Y G+ + R
Sbjct: 198 LLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVAR 257
Query: 297 FFTVYGPWGRPDMAYFF--FTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGALD 354
F +GP + F LQG+ + VY + R F Y+ D+V G V ++
Sbjct: 258 IFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQ---TRAFQYVSDLVNGLVALMN 314
Query: 355 T 355
+
Sbjct: 315 S 315
>UNIPROTKB|Q5PQX0 [details] [associations]
symbol:Uxs1 "UDP-glucuronic acid decarboxylase 1"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803
UniPathway:UPA00796 InterPro:IPR016040 RGD:628680 GO:GO:0016021
GO:GO:0005794 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0032580 CTD:80146 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040
GO:GO:0033320 EMBL:AF482705 EMBL:BC086988 IPI:IPI00480702
RefSeq:NP_647552.1 UniGene:Rn.3037 ProteinModelPortal:Q5PQX0
SMR:Q5PQX0 PRIDE:Q5PQX0 GeneID:246232 KEGG:rno:246232
NextBio:623518 Genevestigator:Q5PQX0 Uniprot:Q5PQX0
Length = 420
Score = 183 (69.5 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 66/241 (27%), Positives = 107/241 (44%)
Query: 121 VLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGDLN 180
+L+TG AGFVGSH + L G V +DNF + KR + + ++ D+
Sbjct: 91 ILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFT----GRKRNVEHWIGHENFELINHDVV 146
Query: 181 DAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQPSI 240
+ PL ++ + HLA+ A M NP + +N G +N+L + K V + +
Sbjct: 147 E-PLYIEV------DQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--L 197
Query: 241 VWASSSSVYGLNTQVPFSESH----RTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLR 296
+ AS+S VYG P SE + P + Y K+ E + + Y G+ + R
Sbjct: 198 LLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVAR 257
Query: 297 FFTVYGPWGRPDMAYFF--FTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGALD 354
F +GP + F LQG+ + VY + R F Y+ D+V G V ++
Sbjct: 258 IFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQ---TRAFQYVSDLVNGLVALMN 314
Query: 355 T 355
+
Sbjct: 315 S 315
>UNIPROTKB|P37777 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:623
"Shigella flexneri" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:X71970
EMBL:AE005674 EMBL:AE014073 GenomeReviews:AE005674_GR
GenomeReviews:AE014073_GR GO:GO:0009103 GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
PANTHER:PTHR10366:SF41 OMA:AKKAFRF EMBL:L14842 PIR:S41534
RefSeq:NP_707936.1 RefSeq:NP_837663.1 ProteinModelPortal:P37777
SMR:P37777 EnsemblBacteria:EBESCT00000086479
EnsemblBacteria:EBESCT00000092444 GeneID:1025931 GeneID:1078528
KEGG:sfl:SF2104 KEGG:sfx:S2227 PATRIC:18705961 Uniprot:P37777
Length = 361
Score = 114 (45.2 bits), Expect = 4.1e-11, Sum P(2) = 4.1e-11
Identities = 33/116 (28%), Positives = 57/116 (49%)
Query: 119 MTVLVTGAAGFVGSHCSL-ALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEG 177
M +LVTG AGF+GS + D V+ +D Y +L+ + F
Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLT--YAGNLESLADVSDSERYAF-EHA 57
Query: 178 DLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKS 233
D+ DA ++++F V+HLAA++ V ++ P +++ +NI G LLE ++
Sbjct: 58 DICDAVAMSRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARN 113
Score = 113 (44.8 bits), Expect = 4.1e-11, Sum P(2) = 4.1e-11
Identities = 47/204 (23%), Positives = 83/204 (40%)
Query: 252 NTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRFFTVYGPWGRPDMAY 311
N +P P+S Y+A+K + + + + YGL YGP+ P+
Sbjct: 149 NEALPLFTETTAYAPSSPYSASKASSDHLVRAWKRTYGLPTIVTNCSNNYGPYHFPEKLI 208
Query: 312 FFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGALDTAXXXXXXXXXXXXPAQ 371
+ L+GK + +Y D RD+ Y++D + AL T
Sbjct: 209 PLVILNALEGKALPIYGKGDQ---IRDWLYVEDHAR----ALYTVVTEGKAG-------- 253
Query: 372 LRVYNLGNTSPVPVGRLVSILENLLNT---KAKKHVIRMPRNGDVPYTHANVSL-AYK-- 425
YN+G + +V + +LL+ K K + ++ D P ++ A K
Sbjct: 254 -ETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGHDRRYAIDADKIS 312
Query: 426 -DFGYKPTTDLAAGLRKFVKWYVS 448
+ G+KP +G+RK V+WY++
Sbjct: 313 RELGWKPQETFESGIRKTVEWYLA 336
>UNIPROTKB|E1BMI4 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050662 "coenzyme binding" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803
InterPro:IPR016040 GO:GO:0005739 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 GeneTree:ENSGT00530000063128 CTD:80146
KO:K08678 GO:GO:0048040 OMA:LGHENFE EMBL:DAAA02031058
EMBL:DAAA02031059 EMBL:DAAA02031060 IPI:IPI00712240
RefSeq:NP_001192993.1 UniGene:Bt.57545 ProteinModelPortal:E1BMI4
Ensembl:ENSBTAT00000007374 GeneID:534788 KEGG:bta:534788
NextBio:20876532 Uniprot:E1BMI4
Length = 420
Score = 181 (68.8 bits), Expect = 4.9e-11, P = 4.9e-11
Identities = 66/241 (27%), Positives = 107/241 (44%)
Query: 121 VLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGDLN 180
+LVTG AGFVGSH + L G V +DNF + KR + + ++ D+
Sbjct: 91 ILVTGGAGFVGSHLTDKLMMDGHEVTVVDNFFT----GRKRNVEHWIGHENFELINHDVV 146
Query: 181 DAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQPSI 240
+ PL ++ + HLA+ A M NP + +N G +N+L + K V + +
Sbjct: 147 E-PLYIEV------DQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--L 197
Query: 241 VWASSSSVYGLNTQVPFSESH----RTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLR 296
+ AS+S VYG P +E + P + Y K+ E + + Y G+ + R
Sbjct: 198 LLASTSEVYGDPEVHPQTEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVAR 257
Query: 297 FFTVYGPWGRPDMAYFF--FTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGALD 354
F +GP + F LQG+ + VY + R F Y+ D+V G V ++
Sbjct: 258 IFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQ---TRAFQYVSDLVNGLVALMN 314
Query: 355 T 355
+
Sbjct: 315 S 315
>UNIPROTKB|Q6T1X6 [details] [associations]
symbol:rmd "GDP-6-deoxy-D-mannose reductase" species:143495
"Aneurinibacillus thermoaerophilus" [GO:0033705
"GDP-4-dehydro-6-deoxy-D-mannose reductase activity" evidence=IDA]
[GO:0055114 "oxidation-reduction process" evidence=IDA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 EMBL:AY442352
PDB:2PK3 PDBsum:2PK3 ProteinModelPortal:Q6T1X6 SMR:Q6T1X6
BRENDA:1.1.1.281 EvolutionaryTrace:Q6T1X6 GO:GO:0033705
Uniprot:Q6T1X6
Length = 309
Score = 177 (67.4 bits), Expect = 5.4e-11, P = 5.4e-11
Identities = 63/235 (26%), Positives = 108/235 (45%)
Query: 119 MTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGD 178
M L+TG AGFVG + + L ++ V G N P+++ ++ D
Sbjct: 1 MRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEAKLPNVE-------------MISLD 47
Query: 179 LNDAPLLTKLF-DVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQ 237
+ D+ + K+ D+ P ++ HLAA++ V+ + N + ++N+ G +++L+ + N
Sbjct: 48 IMDSQRVKKVISDIKP-DYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLD 106
Query: 238 PSIVWASSSSVYG--LNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGL 295
I+ SS YG L + P SE ++ +P S Y +K + +A Y YG+ +
Sbjct: 107 CRILTIGSSEEYGMILPEESPVSEENQL-RPMSPYGVSKASVGMLARQYVKAYGMDIIHT 165
Query: 296 RFFTVYGPWGRPDMAYFFFTK---DILQGKTIDVYKTQDDREVARDFTYIDDVVK 347
R F GP F K DI K + K + E RDFT + D+V+
Sbjct: 166 RTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKV-GNLEAVRDFTDVRDIVQ 219
>UNIPROTKB|F1SU22 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0048040 "UDP-glucuronate
decarboxylase activity" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370
Pfam:PF11803 InterPro:IPR016040 GO:GO:0005739 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 GO:GO:0048040 OMA:LGHENFE
EMBL:CU929826 Ensembl:ENSSSCT00000008920 Uniprot:F1SU22
Length = 397
Score = 180 (68.4 bits), Expect = 5.6e-11, P = 5.6e-11
Identities = 65/241 (26%), Positives = 107/241 (44%)
Query: 121 VLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGDLN 180
+L+TG AGFVGSH + L G V +DNF + KR + + ++ D+
Sbjct: 68 ILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFT----GRKRNVEHWIGHENFELINHDVV 123
Query: 181 DAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQPSI 240
+ PL ++ + HLA+ A M NP + +N G +N+L + K V + +
Sbjct: 124 E-PLYIEV------DQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--L 174
Query: 241 VWASSSSVYGLNTQVPFSESH----RTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLR 296
+ AS+S VYG P +E + P + Y K+ E + + Y G+ + R
Sbjct: 175 LLASTSEVYGDPEVHPQTEDYWGHVNPVGPRACYDEGKRVAETMCYAYMKQEGVEVRVAR 234
Query: 297 FFTVYGPWGRPDMAYFF--FTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGALD 354
F +GP + F LQG+ + VY + R F Y+ D+V G V ++
Sbjct: 235 IFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQ---TRAFQYVSDLVNGLVALMN 291
Query: 355 T 355
+
Sbjct: 292 S 292
>TAIR|locus:2081675 [details] [associations]
symbol:AUD1 "AT3G62830" species:3702 "Arabidopsis
thaliana" [GO:0003824 "catalytic activity" evidence=ISS]
[GO:0005794 "Golgi apparatus" evidence=ISM;IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0019305
"dTDP-rhamnose biosynthetic process" evidence=ISS] [GO:0016020
"membrane" evidence=TAS] [GO:0042732 "D-xylose metabolic process"
evidence=IDA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IDA] [GO:0000139 "Golgi membrane" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0005768 "endosome" evidence=IDA] [GO:0005802
"trans-Golgi network" evidence=IDA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0005886 EMBL:CP002686 GO:GO:0000139
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005768
EMBL:AL162651 GO:GO:0005802 GO:GO:0042732 GO:GO:0008460
GO:GO:0019305 GO:GO:0048040 OMA:FSEALIM UniGene:At.23561
UniGene:At.27002 UniGene:At.63633 EMBL:AY143897 IPI:IPI00539694
PIR:T48072 RefSeq:NP_001118893.1 RefSeq:NP_191842.1
ProteinModelPortal:Q9LZI2 SMR:Q9LZI2 PRIDE:Q9LZI2
EnsemblPlants:AT3G62830.1 EnsemblPlants:AT3G62830.2 GeneID:825458
KEGG:ath:AT3G62830 TAIR:At3g62830 InParanoid:Q9LZI2
PhylomeDB:Q9LZI2 ProtClustDB:PLN02206 Genevestigator:Q9LZI2
Uniprot:Q9LZI2
Length = 445
Score = 179 (68.1 bits), Expect = 9.5e-11, P = 9.5e-11
Identities = 68/244 (27%), Positives = 109/244 (44%)
Query: 118 GMTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEG 177
G+ V+VTG AGFVGSH L RGD V+ +DNF + K ++
Sbjct: 118 GLRVVVTGGAGFVGSHLVDRLMARGDTVIVVDNFFT----GRKENVMHHFSNPNFEMIRH 173
Query: 178 DLNDAPLLTKLFDVVPFTHVLHLAAQAG-VRYAMQNPQSYVASNIAGFVNLLEVCKSVNP 236
D+ + P+L ++ + HLA A V Y NP + +N+ G +N+L + K V
Sbjct: 174 DVVE-PILLEV------DQIYHLACPASPVHYKF-NPVKTIKTNVVGTLNMLGLAKRVGA 225
Query: 237 QPSIVWASSSSVYGLNTQVPFSESHRTD-QPA---SLYAATKKAGEEIAHTYNHIYGLAL 292
+ + S+S VYG Q P E++ + P S Y K+ E + Y+ + +
Sbjct: 226 R--FLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANVEV 283
Query: 293 TGLRFFTVYGPWGRPDMAYFF--FTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCV 350
R F YGP D F L+ + + VY D + R F ++ D+V+G +
Sbjct: 284 RIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVY---GDGKQTRSFQFVSDLVEGLM 340
Query: 351 GALD 354
++
Sbjct: 341 RLME 344
>UNIPROTKB|E1BV28 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370
Pfam:PF11803 InterPro:IPR016040 GO:GO:0005739 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 CTD:80146 KO:K08678 GO:GO:0048040
OMA:LGHENFE EMBL:AADN02017868 IPI:IPI00574801 RefSeq:XP_416926.1
ProteinModelPortal:E1BV28 Ensembl:ENSGALT00000027123 GeneID:418728
KEGG:gga:418728 NextBio:20821874 Uniprot:E1BV28
Length = 421
Score = 177 (67.4 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 65/241 (26%), Positives = 106/241 (43%)
Query: 121 VLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGDLN 180
+L+TG AGFVGSH + L G V +DNF + KR + + ++ D+
Sbjct: 92 ILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFT----GRKRNVEHWIGHENFELINHDVV 147
Query: 181 DAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQPSI 240
+ PL ++ + HLA+ A M NP + +N G +N+L + K V + +
Sbjct: 148 E-PLYIEV------DQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--L 198
Query: 241 VWASSSSVYGLNTQVPFSESH----RTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLR 296
+ AS+S VYG P +E + P + Y K+ E + + Y G+ + R
Sbjct: 199 LLASTSEVYGDPEVHPQNEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVAR 258
Query: 297 FFTVYGPWGRPDMAYFF--FTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGALD 354
F +GP + F LQG+ + VY R F Y+ D+V G V ++
Sbjct: 259 IFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGPGTQ---TRAFQYVSDLVNGLVALMN 315
Query: 355 T 355
+
Sbjct: 316 S 316
>ZFIN|ZDB-GENE-020419-37 [details] [associations]
symbol:uxs1 "UDP-glucuronic acid decarboxylase 1"
species:7955 "Danio rerio" [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0051216 "cartilage
development" evidence=IMP] [GO:0001503 "ossification" evidence=IMP]
[GO:0030166 "proteoglycan biosynthetic process" evidence=IMP]
[GO:0030206 "chondroitin sulfate biosynthetic process"
evidence=IMP] [GO:0015012 "heparan sulfate proteoglycan
biosynthetic process" evidence=IGI;IMP] [GO:0030198 "extracellular
matrix organization" evidence=IGI;IMP] [GO:0050650 "chondroitin
sulfate proteoglycan biosynthetic process" evidence=IGI;IMP]
[GO:0016831 "carboxy-lyase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016829 "lyase activity" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0032580
"Golgi cisterna membrane" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 UniPathway:UPA00796
InterPro:IPR016040 ZFIN:ZDB-GENE-020419-37 GO:GO:0016021
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0030198 GO:GO:0032580 GO:GO:0051216 GO:GO:0001503
GO:GO:0015012 GO:GO:0030206 GeneTree:ENSGT00530000063128
EMBL:AF506235 EMBL:BC074058 IPI:IPI00494152 RefSeq:NP_775349.1
UniGene:Dr.79684 ProteinModelPortal:Q6GMI9 SMR:Q6GMI9 STRING:Q6GMI9
Ensembl:ENSDART00000078525 GeneID:192315 KEGG:dre:192315 CTD:80146
HOGENOM:HOG000168004 HOVERGEN:HBG094144 InParanoid:Q6GMI9 KO:K08678
OrthoDB:EOG4ZW5B0 NextBio:20797152 ArrayExpress:Q6GMI9 Bgee:Q6GMI9
GO:GO:0048040 GO:GO:0033320 Uniprot:Q6GMI9
Length = 418
Score = 174 (66.3 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 66/243 (27%), Positives = 107/243 (44%)
Query: 121 VLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGDLN 180
+L+TG AGFVGSH + L G V +DNF + KR + + ++ D+
Sbjct: 89 ILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFT----GRKRNVEHWIGHENFELINHDVV 144
Query: 181 DAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQPSI 240
+ PL ++ + HLA+ A M NP + +N G +N+L + K V + +
Sbjct: 145 E-PLYIEV------DQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--L 195
Query: 241 VWASSSSVYGLNTQVPFSESH----RTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLR 296
+ AS+S VYG P +E + P + Y K+ E + + Y G+ + R
Sbjct: 196 LLASTSEVYGDPEVHPQNEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVAR 255
Query: 297 FFTVYGPWGRPDM----AYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGA 352
F +G R M F LQG+ + VY + R F Y+ D+V G V
Sbjct: 256 IFNTFG--SRMHMNDGRVVSNFILQALQGEALTVYGSGSQ---TRAFQYVSDLVNGLVSL 310
Query: 353 LDT 355
+++
Sbjct: 311 MNS 313
>UNIPROTKB|P55293 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:562
"Escherichia coli" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AF125322
GO:GO:0009103 GO:GO:0045226 GO:GO:0009243 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
PANTHER:PTHR10366:SF41 PIR:S78542 ProteinModelPortal:P55293
SMR:P55293 PRIDE:P55293 SABIO-RK:P55293 Uniprot:P55293
Length = 361
Score = 110 (43.8 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 45/190 (23%), Positives = 80/190 (42%)
Query: 266 PASLYAATKKAGEEIAHTYNHIYGLALTGLRFFTVYGPWGRPDMAYFFFTKDILQGKTID 325
P+S Y+A+K + + + + YGL YGP+ P+ + L+GK +
Sbjct: 163 PSSPYSASKASSDHLVRAWKRTYGLPTIVSNCSNNYGPYHFPEKLIPLVILNALEGKALP 222
Query: 326 VYKTQDDREVARDFTYIDDVVKGCVGALDTAXXXXXXXXXXXXPAQLRVYNLGNTSPVPV 385
+Y D RD+ Y++D + AL T YN+G +
Sbjct: 223 IYGKGDQ---IRDWLYVEDHAR----ALYTVVTEGKAG---------ETYNIGGHNEKKN 266
Query: 386 GRLVSILENLLNT---KAKKHVIRMPRNGDVPYTHANVSL-AYK---DFGYKPTTDLAAG 438
+V + +LL+ K K + ++ D P ++ A K + G+KP +G
Sbjct: 267 IDVVFTICDLLDEIVPKEKSYREQITYVADRPGHDRRYAIDADKISRELGWKPQETFESG 326
Query: 439 LRKFVKWYVS 448
+RK V+WY++
Sbjct: 327 IRKTVEWYLA 336
Score = 103 (41.3 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 32/116 (27%), Positives = 54/116 (46%)
Query: 119 MTVLVTGAAGFVGSHCSL-ALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEG 177
M +LVTG AGF+GS + D V+ +D Y +L+ + + +
Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLT--YAGNLESLAE-ISDSERYSFENA 57
Query: 178 DLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKS 233
D+ DA F V+HLAA++ V ++ P +++ +NI G LLE ++
Sbjct: 58 DICDAEGDGLYFGQHQLDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARN 113
>ASPGD|ASPL0000073187 [details] [associations]
symbol:ugeA species:162425 "Emericella nidulans"
[GO:0006012 "galactose metabolic process" evidence=RCA;IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=RCA;IDA] [GO:0005622 "intracellular"
evidence=IDA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0042125 "protein
galactosylation" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 EMBL:BN001303
GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 OMA:ADKAWNA
ProteinModelPortal:C8VAU8 EnsemblFungi:CADANIAT00005702
Uniprot:C8VAU8
Length = 371
Score = 159 (61.0 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 56/169 (33%), Positives = 86/169 (50%)
Query: 116 PNGMTVLVTGAAGFVGSHCSLALKKRGDGVLGLDN-FNSYYDPSLKRARQKLLQKHQVFI 174
P+G +VLVTG G++GS +LAL + G V+ DN +NS + +L R +L+ +
Sbjct: 2 PSG-SVLVTGGTGYIGSFTTLALLEAGYKVVVADNLYNSSAE-ALNRI--ELISGKKAEF 57
Query: 175 VEGDLNDAPLLTKLFDVVP-FTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKS 233
+ D+ D K+F+ P V+H AA V + + P Y N+ G + LL
Sbjct: 58 AQLDVTDEAAFDKVFEAHPDIDSVIHFAALKAVGESGEKPLDYYHVNVYGTICLLRSMVR 117
Query: 234 VNPQPSIVWASSSSVYGLNTQ----VPFSESHRTDQPASLYAATKKAGE 278
N +IV++SS++VYG T+ +P E H P + Y TK A E
Sbjct: 118 HNVT-NIVFSSSATVYGDATRFPDMIPIPE-HCPLGPTNPYGNTKFAIE 164
Score = 48 (22.0 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 28/122 (22%), Positives = 44/122 (36%)
Query: 325 DVYKTQDDREVARDFTYIDDVVKGCVGALDTAXXXXXXXXXXXXPAQLRVYNLGNTSPVP 384
D Y + D + RD+ +I D+ G + AL+ P +R +NLG
Sbjct: 240 DDYASHDGTAI-RDYIHILDLADGHLKALN--------YLRANNPG-VRAWNLGTGRGST 289
Query: 385 VGRLVSILENLLNTKAKKHVIRMPRN-GDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFV 443
V ++ + V PR GDV +N + A + G+K L
Sbjct: 290 VYEMIRAFSKAVGRDLPYEVA--PRRAGDVLNLTSNPTRANTELGWKAQRTLEQACEDLW 347
Query: 444 KW 445
W
Sbjct: 348 LW 349
>UNIPROTKB|Q5QPP4 [details] [associations]
symbol:GALE "UDP-glucose 4-epimerase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=IEA] [GO:0006012
"galactose metabolic process" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 EMBL:AL031295 UniGene:Hs.632380 HGNC:HGNC:4116
HOVERGEN:HBG001396 IPI:IPI00030229 SMR:Q5QPP4
Ensembl:ENST00000429356 Uniprot:Q5QPP4
Length = 239
Score = 147 (56.8 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 53/194 (27%), Positives = 92/194 (47%)
Query: 178 DLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQ 237
D+ D L +LF F V+H A V ++Q P Y N+ G + LLE+ K+ +
Sbjct: 2 DILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVK 61
Query: 238 PSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTY---NHIYGLALTG 294
++V++SS++VYG +P E+H T + Y +K EE+ + + L
Sbjct: 62 -NLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVL-- 118
Query: 295 LRFFTVYG----------PWGRPDMAYFFFTKDIL-QGKTIDV----YKTQDDREVARDF 339
LR+F G P G P+ + ++ + + + ++V Y T+D V RD+
Sbjct: 119 LRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGV-RDY 177
Query: 340 TYIDDVVKGCVGAL 353
++ D+ KG + AL
Sbjct: 178 IHVVDLAKGHIAAL 191
Score = 49 (22.3 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 409 RNGDVPYTHANVSLAYKDFGY 429
R GDV +AN SLA ++ G+
Sbjct: 210 REGDVAACYANPSLAQEELGW 230
>UNIPROTKB|O53454 [details] [associations]
symbol:MT1137 "3 beta-hydroxysteroid dehydrogenase/Delta
5-->4-isomerase" species:1773 "Mycobacterium tuberculosis"
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IDA] [GO:0004769 "steroid delta-isomerase activity"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0008202 "steroid metabolic
process" evidence=IDA] [GO:0030283 "testosterone dehydrogenase
[NAD(P)] activity" evidence=IDA] [GO:0070403 "NAD+ binding"
evidence=IDA] InterPro:IPR002225 Pfam:PF01073 UniPathway:UPA00062
InterPro:IPR016040 GO:GO:0005829 GO:GO:0005886 EMBL:BX842575
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
eggNOG:COG0451 HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0004769
Gene3D:3.40.50.720 GO:GO:0006694 GO:GO:0030283 PIR:H70897
RefSeq:NP_215622.1 RefSeq:NP_335580.1 RefSeq:YP_006514475.1
ProteinModelPortal:O53454 SMR:O53454 PRIDE:O53454
EnsemblBacteria:EBMYCT00000002215 EnsemblBacteria:EBMYCT00000071008
GeneID:13319678 GeneID:886004 GeneID:924962 KEGG:mtc:MT1137
KEGG:mtu:Rv1106c KEGG:mtv:RVBD_1106c PATRIC:18124264
TubercuList:Rv1106c KO:K16045 OMA:IQLQPTF ProtClustDB:CLSK790953
BioCyc:MetaCyc:MONOMER-16889 BindingDB:O53454 ChEMBL:CHEMBL1744528
GO:GO:0070403 GO:GO:0016042 GO:GO:0008202 Uniprot:O53454
Length = 370
Score = 150 (57.9 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 66/237 (27%), Positives = 97/237 (40%)
Query: 121 VLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGDLN 180
VLVTG AGFVG++ L RG V D PSL A Q+ +++GD+
Sbjct: 17 VLVTGGAGFVGANLVTTLLDRGHWVRSFDRA-----PSLLPAHP------QLEVLQGDIT 65
Query: 181 DAPLLTKLFDVVPFTHVLHLAA----QAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNP 236
DA + D + + H AA G + Q A N+ G NLL +
Sbjct: 66 DADVCAAAVDGIDT--IFHTAAIIELMGGASVTDEYRQRSFAVNVGGTENLLHAGQRAGV 123
Query: 237 QPSIVWASSSSVYGLNTQVPFSES-HRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGL 295
Q + +S+S V G E+ TD+ LY TK E N + G+ +
Sbjct: 124 QRFVYTSSNSVVMGGQNIAGGDETLPYTDRFNDLYTETKVVAERFVLAQNGVDGMLTCAI 183
Query: 296 RFFTVYGPWGRPDMAYFF-FTKDILQGKTIDVYKTQDDREVAR-DFTYIDDVVKGCV 350
R G WG D F + +L+G K R+ AR D +Y+ +++ G +
Sbjct: 184 R---PSGIWGNGDQTMFRKLFESVLKGHV----KVLVGRKSARLDNSYVHNLIHGFI 233
Score = 54 (24.1 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 13/52 (25%), Positives = 27/52 (51%)
Query: 419 NVSLAYKDFGYKPTTDLAAGLRKFVKWYVSYYGIQPRVKKENGFSTTTSTIQ 470
+++ A +D GY+P L + + +YVS + ++K E T +T++
Sbjct: 321 SIAKARRDLGYEPLFTTQQALTECLPYYVSLF---EQMKNEARAEKTAATVK 369
>TAIR|locus:2150441 [details] [associations]
symbol:GME ""GDP-D-mannose 3',5'-epimerase"" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=ISS] [GO:0044237 "cellular metabolic
process" evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0047918 "GDP-mannose 3,5-epimerase activity" evidence=ISS;IDA]
[GO:0019853 "L-ascorbic acid biosynthetic process" evidence=TAS]
[GO:0051287 "NAD binding" evidence=TAS] [GO:0005829 "cytosol"
evidence=IDA] UniPathway:UPA00990 InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0005829 EMBL:CP002688
GenomeReviews:BA000015_GR eggNOG:COG0451 Gene3D:3.40.50.720
GO:GO:0051287 GO:GO:0019853 EMBL:AF272706 EMBL:AY057660
EMBL:AY057694 EMBL:AY116953 IPI:IPI00536932 RefSeq:NP_001190417.1
RefSeq:NP_198236.1 UniGene:At.21733 PDB:2C54 PDB:2C59 PDB:2C5A
PDB:2C5E PDBsum:2C54 PDBsum:2C59 PDBsum:2C5A PDBsum:2C5E
ProteinModelPortal:Q93VR3 SMR:Q93VR3 STRING:Q93VR3 PaxDb:Q93VR3
PRIDE:Q93VR3 EnsemblPlants:AT5G28840.1 EnsemblPlants:AT5G28840.2
GeneID:833002 KEGG:ath:AT5G28840 TAIR:At5g28840
HOGENOM:HOG000168017 InParanoid:Q93VR3 KO:K10046 OMA:RKAQTST
PhylomeDB:Q93VR3 ProtClustDB:PLN02695 BioCyc:ARA:AT5G28840-MONOMER
BioCyc:MetaCyc:AT5G28840-MONOMER EvolutionaryTrace:Q93VR3
Genevestigator:Q93VR3 GermOnline:AT5G28840 GO:GO:0047918
Uniprot:Q93VR3
Length = 377
Score = 161 (61.7 bits), Expect = 6.7e-09, P = 6.7e-09
Identities = 85/341 (24%), Positives = 134/341 (39%)
Query: 119 MTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGD 178
+ + +TGA GF+ SH + LK G V+ D + + + + +F E
Sbjct: 28 LKISITGAGGFIASHIARRLKHEGHYVIASD----------WKKNEHMTE--DMFCDEFH 75
Query: 179 LNDAPLLTKLFDVVP-FTHVLHLAAQAGVRYAMQNPQSYVASN--IAGFVNLLEVCKSVN 235
L D ++ V HV +LAA G +Q+ S + N + F N++E + +N
Sbjct: 76 LVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISF-NMIEAAR-IN 133
Query: 236 PQPSIVWASSSSVYGL-----NTQVPFSESHRTD-QPASLYAATKKAGEEIAHTYNHIYG 289
+ASS+ +Y T V ES +P Y K A EE+ YN +G
Sbjct: 134 GIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAYGLEKLATEELCKHYNKDFG 193
Query: 290 LALTGLRFFTVYGP---W--GRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDD 344
+ RF +YGP W GR F K Q T D ++ D R FT+ID+
Sbjct: 194 IECRIGRFHNIYGPFGTWKGGREKAPAAFCRK--AQTST-DRFEMWGDGLQTRSFTFIDE 250
Query: 345 VVKGCVGALDTAXXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAKKHV 404
V+G + P N+G+ V + + ++ + K H
Sbjct: 251 CVEGVL---------RLTKSDFREPV-----NIGSDEMVSMNEMAEMVLSFEEKKLPIHH 296
Query: 405 IRMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKW 445
I P V +++ +L + G+ P L GLR W
Sbjct: 297 IPGPEG--VRGRNSDNNLIKEKLGWAPNMRLKEGLRITYFW 335
>TAIR|locus:2155036 [details] [associations]
symbol:GMD1 ""GDP-D-mannose 4,6-dehydratase 1""
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=ISM] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=IEA;ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0019673
"GDP-mannose metabolic process" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0005622 EMBL:AB022211 GO:GO:0019673
GO:GO:0042351 eggNOG:COG1089 KO:K01711 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 EMBL:AF195140
IPI:IPI00517362 RefSeq:NP_201429.1 UniGene:At.46822
ProteinModelPortal:Q9SNY3 SMR:Q9SNY3 IntAct:Q9SNY3 STRING:Q9SNY3
PaxDb:Q9SNY3 PRIDE:Q9SNY3 EnsemblPlants:AT5G66280.1 GeneID:836760
KEGG:ath:AT5G66280 TAIR:At5g66280 InParanoid:Q9SNY3
PhylomeDB:Q9SNY3 ProtClustDB:PLN02653 Genevestigator:Q9SNY3
GermOnline:AT5G66280 Uniprot:Q9SNY3
Length = 361
Score = 160 (61.4 bits), Expect = 7.9e-09, P = 7.9e-09
Identities = 67/192 (34%), Positives = 93/192 (48%)
Query: 122 LVTGAAGFVGSHCSLALKKRGDGVLGL----DNFNS------YYDPSLKRARQKLLQKHQ 171
LVTG G GS+ + L ++G V GL NFN+ Y DP + L++ H
Sbjct: 20 LVTGITGQDGSYLTEFLLEKGYEVHGLIRRSSNFNTQRLNHIYVDPH--NVNKALMKLHY 77
Query: 172 VFIVEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIA-GFVNLLEV 230
GDL+DA L + DV+ V +LAAQ+ V + + P Y A +A G + LLE
Sbjct: 78 -----GDLSDASSLRRWLDVIKPDEVYNLAAQSHVAVSFEIPD-YTADVVATGALRLLEA 131
Query: 231 CKSVNPQP--SIVW--ASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNH 286
+S N +I + A SS ++G +T P SE+ P S YAA+K A Y
Sbjct: 132 VRSHNIDNGRAIKYYQAGSSEMFG-STPPPQSET-TPFHPRSPYAASKCAAHWYTVNYRE 189
Query: 287 IYGL-ALTGLRF 297
YGL A G+ F
Sbjct: 190 AYGLYACNGILF 201
>UNIPROTKB|Q5QPP3 [details] [associations]
symbol:GALE "UDP-glucose 4-epimerase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IEA] [GO:0006012 "galactose metabolic process"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
PANTHER:PTHR10366:SF39 TIGRFAMs:TIGR01179 EMBL:AL031295
UniGene:Hs.632380 HGNC:HGNC:4116 HOVERGEN:HBG001396 IPI:IPI00644339
SMR:Q5QPP3 Ensembl:ENST00000418277 Uniprot:Q5QPP3
Length = 227
Score = 151 (58.2 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 62/240 (25%), Positives = 106/240 (44%)
Query: 178 DLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQ 237
D+ D L +LF F V+H A V ++Q P Y N+ G + LLE+ K+ +
Sbjct: 2 DILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVK 61
Query: 238 PSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTY---NHIYGLALTG 294
++V++SS++VYG +P E+H T + Y +K EE+ + + L
Sbjct: 62 -NLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVL-- 118
Query: 295 LRFFTVYG----------PWGRPDMAYFFFTKDIL-QGKTIDV----YKTQDDREVARDF 339
LR+F G P G P+ + ++ + + + ++V Y T+D V RD+
Sbjct: 119 LRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGV-RDY 177
Query: 340 TYIDDVVKGCVGALDTAXXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILENLLNTK 399
++ D+ KG + AL R+YNLG + V ++V +E K
Sbjct: 178 IHVVDLAKGHIAAL----------RKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKK 227
>UNIPROTKB|O53634 [details] [associations]
symbol:gca "POSSIBLE GDP-MANNOSE 4,6-DEHYDRATASE GCA
(GDP-D-MANNOSE DEHYDRATASE)" species:83332 "Mycobacterium
tuberculosis H37Rv" [GO:0040007 "growth" evidence=IMP]
InterPro:IPR001509 InterPro:IPR020904 Pfam:PF01370 PROSITE:PS00061
InterPro:IPR016040 GO:GO:0040007 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0016491 EMBL:BX842572 GO:GO:0044237
GO:GO:0055114 KO:K01711 GO:GO:0008446 HOGENOM:HOG000167992
HSSP:P32054 EMBL:CP003248 PIR:C70840 RefSeq:NP_214626.1
RefSeq:NP_334530.1 RefSeq:YP_006513430.1 SMR:O53634 DNASU:886907
EnsemblBacteria:EBMYCT00000003264 EnsemblBacteria:EBMYCT00000070103
GeneID:13316094 GeneID:886907 GeneID:922974 KEGG:mtc:MT0121
KEGG:mtu:Rv0112 KEGG:mtv:RVBD_0112 PATRIC:18121990
TubercuList:Rv0112 OMA:CSGVATR ProtClustDB:CLSK790272
Uniprot:O53634
Length = 318
Score = 156 (60.0 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 55/190 (28%), Positives = 87/190 (45%)
Query: 119 MTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGD 178
M V +TGA G +GSH + L G V + +Y P++ + LQ + E D
Sbjct: 1 MKVWITGAGGMMGSHLAEMLLAAGHDV-----YATYCRPTIDPSD---LQFNGA---EVD 49
Query: 179 LNDAPLLTKLFD-VVPFTH--VLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVN 235
+ D ++D + F V HLAAQ+ + P + +N+ G + E + V
Sbjct: 50 ITD---WCSVYDSIATFRPDAVFHLAAQSYPAVSWARPVETLTTNMVGTAIVFEALRRVR 106
Query: 236 PQPSIVWASSSSVYGL--NTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALT 293
P I+ A SS+ YG ++VP +E R +P Y +K A + +A+ Y+ YG+
Sbjct: 107 PHAKIIVAGSSAEYGFVDPSEVPINE-RRELRPLHPYGVSKAATDMLAYQYHKSYGMHTV 165
Query: 294 GLRFFTVYGP 303
R F GP
Sbjct: 166 VARIFNCTGP 175
>WB|WBGene00015298 [details] [associations]
symbol:C01F1.3 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0018991 "oviposition"
evidence=IMP] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0040007 GO:GO:0018991 GO:GO:0002119
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0040011 GeneTree:ENSGT00530000063128 KO:K12450 GO:GO:0008460
eggNOG:COG1088 OMA:TARMNNI PANTHER:PTHR10366:SF41 HSSP:P26391
EMBL:FO080258 PIR:T15370 RefSeq:NP_001040727.1
ProteinModelPortal:Q17556 SMR:Q17556 STRING:Q17556
World-2DPAGE:0020:Q17556 PaxDb:Q17556 EnsemblMetazoa:C01F1.3a
GeneID:173762 KEGG:cel:CELE_C01F1.3 UCSC:C01F1.3a CTD:173762
WormBase:C01F1.3a HOGENOM:HOG000017218 InParanoid:Q17556
NextBio:880983 ArrayExpress:Q17556 Uniprot:Q17556
Length = 631
Score = 159 (61.0 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 78/363 (21%), Positives = 139/363 (38%)
Query: 121 VLVTGAAGFVGSHCSLALKKRGD--GVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGD 178
V++TG GF+GS+ + + +D + + + + + +V D
Sbjct: 8 VVITGGCGFIGSNFVNYIHDAWPTCNFVNIDKL--ILNSDTQNVAESVRNSPRYKLVLTD 65
Query: 179 LNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQP 238
+ + + +F+ V+H AA V +N+ F+ LE ++
Sbjct: 66 IKNEAAILNVFEQNEIDTVIHFAADCTSTRCYNETAEAVQNNVLSFIQFLETVRTYGKIK 125
Query: 239 SIVWASSSSVYGLNTQVPFSESHRTD----QPASLYAATKKAGEEIAHTYNHIYGLALTG 294
V S+ VYG ++ + +E + + P + YAATK AGE Y Y L +
Sbjct: 126 RFVHISTDEVYG-DSDLSENEQGKVEFSRLVPGNPYAATKIAGEAYVRAYQTQYNLPIVT 184
Query: 295 LRFFTVYGP--WGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGA 352
R +YGP W + F + +G+ Y Q + R + ++DD G
Sbjct: 185 ARMNNIYGPNQWDVKVVPRFIEIAKV-RGE----YTIQGSGKQLRSWLFVDDASAGLKAV 239
Query: 353 LDTAXXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILENLLNTK-AKKHVIRMPRN- 410
+ +YNLG V L ++ ++ + + H ++
Sbjct: 240 CEKGELH-------------EIYNLGTYYEKNVADLAKTIQEEVDLQLGRAHEPPKYKSI 286
Query: 411 GDVPYTHAN--VSL--AYKDFGYKPTTDLAAGLR----------KFVKWYVSYYGIQPRV 456
D PY +S+ A D G++PTT G+R K VK +V+ YG + V
Sbjct: 287 PDRPYNDLRYLISIEKAKNDLGWEPTTSFDDGMRHTVASALKEHKHVKMHVAIYGGKGYV 346
Query: 457 KKE 459
+E
Sbjct: 347 GQE 349
>TIGR_CMR|CJE_1611 [details] [associations]
symbol:CJE_1611 "GDP-mannose 4,6-dehydratase"
species:195099 "Campylobacter jejuni RM1221" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0044237 KO:K01711 GO:GO:0008446
HOGENOM:HOG000167992 RefSeq:YP_179592.1 ProteinModelPortal:Q5HSZ3
STRING:Q5HSZ3 GeneID:3232239 KEGG:cjr:CJE1611 PATRIC:20045019
OMA:RISIFYA ProtClustDB:CLSK931088
BioCyc:CJEJ195099:GJC0-1641-MONOMER Uniprot:Q5HSZ3
Length = 343
Score = 153 (58.9 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 57/198 (28%), Positives = 90/198 (45%)
Query: 120 TVLVTGAAGFVGSHCSLALKKRGD-GVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGD 178
T L+TG G VGS + L D V+G+ + D ++ ++ +K ++ I D
Sbjct: 4 TALITGFTGQVGSQMADFLLANTDYEVIGMMRWQEPMD-NIYHLSDRINKKDRISIFYAD 62
Query: 179 LNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLE---VCKSVN 235
LND L KLF+ + HLAAQ+ + + P + +NI G N+LE + K+ +
Sbjct: 63 LNDYSSLQKLFESQRPDVIFHLAAQSYPKTSFDIPIETLQTNIIGTANILENIRILKAKD 122
Query: 236 PQPSIVWA-SSSSVYG-LNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALT 293
+V SSS VYG + +E T AS Y+ +K + + Y Y +
Sbjct: 123 GYDPVVHVCSSSEVYGRAKVGIKLNED-TTFHGASPYSISKIGTDYLGRFYGEAYNIRTF 181
Query: 294 GLRFFTVYGPWGRPDMAY 311
R T GP R D+ +
Sbjct: 182 VTRMGTHSGP-RRSDVFF 198
>TIGR_CMR|CPS_4199 [details] [associations]
symbol:CPS_4199 "GDP-mannose 4,6-dehydratase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005622 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0019673
eggNOG:COG1089 KO:K01711 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 RefSeq:YP_270850.1
ProteinModelPortal:Q47WH2 SMR:Q47WH2 STRING:Q47WH2 GeneID:3519434
KEGG:cps:CPS_4199 PATRIC:21471261 ProtClustDB:CLSK589180
BioCyc:CPSY167879:GI48-4209-MONOMER Uniprot:Q47WH2
Length = 374
Score = 153 (58.9 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 56/183 (30%), Positives = 88/183 (48%)
Query: 122 LVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPS-LKRARQKLLQKHQVFIVE-GDL 179
L+TG G GS+ + L ++G V G+ +S + + Q +K+Q F + GDL
Sbjct: 8 LITGITGQDGSYLAELLLEKGYEVHGIKRRSSSLNTERIDHIYQDNHEKNQKFFLHYGDL 67
Query: 180 NDAPLLTKLF-DVVPFTHVLHLAAQAGVRYAMQNPQSYVAS-NIAGFVNLLEVCK--SVN 235
D+ LT++ DV P V +L AQ+ V + + P+ Y A + G + LLE + +
Sbjct: 68 TDSSNLTRILKDVQP-DEVYNLGAQSHVAVSFECPE-YTADVDAIGTLRLLEAIRFLGLE 125
Query: 236 PQPSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGL-ALTG 294
+ AS+S +YG ++P SE+ P S YA K I Y YG+ A G
Sbjct: 126 KKTKFYQASTSELYGEVQEIPQSET-TPFHPRSPYAVAKMYAYWIVVNYRESYGMYACNG 184
Query: 295 LRF 297
+ F
Sbjct: 185 ILF 187
>TIGR_CMR|CBU_0689 [details] [associations]
symbol:CBU_0689 "GDP-mannose 4,6-dehydratase"
species:227377 "Coxiella burnetii RSA 493" [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005622 GenomeReviews:AE016828_GR GO:GO:0019673 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 HSSP:P93031 EMBL:AF387640
ProteinModelPortal:Q93N54 SMR:Q93N54 PRIDE:Q93N54 PATRIC:17930061
ProtClustDB:CLSK914242 BioCyc:CBUR227377:GJ7S-687-MONOMER
Uniprot:Q93N54
Length = 348
Score = 152 (58.6 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 58/183 (31%), Positives = 87/183 (47%)
Query: 123 VTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQ----VFIVEGD 178
+TG G GS+ + L ++ V G+ +S ++ +R +KH+ +F+ GD
Sbjct: 7 ITGITGQDGSYLAELLLRKDYEVHGMIRRSSSFNT--ERLSDIYEEKHKENARLFLHYGD 64
Query: 179 LNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIA-GFVNLLEVCKSVNPQ 237
+ D +L KL + V +LAAQ+ VR + P Y I G +N+LE K+ +
Sbjct: 65 ITDGLVLNKLIHEIKPHEVYNLAAQSHVRVSFDIPV-YTMETIGLGTLNILEAIKNADNA 123
Query: 238 PSIVW--ASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGL-ALTG 294
I + ASSS +YG VP +ES + P S YA K Y YGL A TG
Sbjct: 124 KEIRFYQASSSEMYGDVKSVPQTESTPFN-PRSPYACAKVFAHYQTINYRESYGLHASTG 182
Query: 295 LRF 297
+ F
Sbjct: 183 ILF 185
>WB|WBGene00000266 [details] [associations]
symbol:bre-1 species:6239 "Caenorhabditis elegans"
[GO:0019673 "GDP-mannose metabolic process" evidence=IEA;IDA]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IEA;IDA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0009058 "biosynthetic process"
evidence=IEA] [GO:0008831 "dTDP-4-dehydrorhamnose reductase
activity" evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0071688 "striated muscle myosin thick filament assembly"
evidence=IMP] [GO:0042350 "GDP-L-fucose biosynthetic process"
evidence=IDA] [GO:0055120 "striated muscle dense body"
evidence=IDA] [GO:0030017 "sarcomere" evidence=IDA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 GO:GO:0005783 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0030017 GO:GO:0055120 GO:GO:0071688
GO:GO:0075015 GO:GO:0017085 GO:GO:0019673 GO:GO:0042351
eggNOG:COG1089 KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472
EMBL:AM231683 EMBL:AM231684 EMBL:Z68215 PIR:T20182
RefSeq:NP_001076668.1 RefSeq:NP_001076669.1 RefSeq:NP_001076670.1
RefSeq:NP_501563.1 RefSeq:NP_501564.1 UniGene:Cel.13248
ProteinModelPortal:Q18801 SMR:Q18801 STRING:Q18801 PaxDb:Q18801
PRIDE:Q18801 EnsemblMetazoa:C53B4.7b GeneID:177717
KEGG:cel:CELE_C53B4.7 UCSC:C53B4.7a.1 CTD:177717 WormBase:C53B4.7a
WormBase:C53B4.7b WormBase:C53B4.7c WormBase:C53B4.7d
WormBase:C53B4.7e GeneTree:ENSGT00440000033640 InParanoid:Q18801
OMA:IAYNLTD NextBio:898062 GO:GO:0042350 Uniprot:Q18801
Length = 399
Score = 152 (58.6 bits), Expect = 7.7e-08, P = 7.7e-08
Identities = 52/184 (28%), Positives = 85/184 (46%)
Query: 122 LVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPS-LKRARQKLLQKH--QVFIVE-G 177
L+TG +G GS+ + L +G V G+ +S ++ + ++ + H F + G
Sbjct: 54 LITGISGQDGSYLAELLLSKGYKVHGIIRRSSSFNTARIEHLYSNPITHHGDSSFSLHYG 113
Query: 178 DLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEV---CKSV 234
D+ D+ L KL + T V HLAAQ+ V+ + P+ + G + LL+ C+ +
Sbjct: 114 DMTDSSCLIKLISTIEPTEVYHLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIHACR-L 172
Query: 235 NPQPSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGL-ALT 293
+ AS+S +YG ++P SE P S YA K G I Y Y + A
Sbjct: 173 TEKVRFYQASTSELYGKVQEIPQSEK-TPFYPRSPYAVAKMYGYWIVVNYREAYNMFACN 231
Query: 294 GLRF 297
G+ F
Sbjct: 232 GILF 235
>UNIPROTKB|Q18801 [details] [associations]
symbol:bre-1 "GDP-mannose 4,6 dehydratase 1" species:6239
"Caenorhabditis elegans" [GO:0017085 "response to insecticide"
evidence=IMP] [GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IDA] [GO:0075015 "formation of infection structure on or
near host" evidence=IMP] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0005783
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0030017
GO:GO:0055120 GO:GO:0071688 GO:GO:0075015 GO:GO:0017085
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 EMBL:AM231683 EMBL:AM231684 EMBL:Z68215
PIR:T20182 RefSeq:NP_001076668.1 RefSeq:NP_001076669.1
RefSeq:NP_001076670.1 RefSeq:NP_501563.1 RefSeq:NP_501564.1
UniGene:Cel.13248 ProteinModelPortal:Q18801 SMR:Q18801
STRING:Q18801 PaxDb:Q18801 PRIDE:Q18801 EnsemblMetazoa:C53B4.7b
GeneID:177717 KEGG:cel:CELE_C53B4.7 UCSC:C53B4.7a.1 CTD:177717
WormBase:C53B4.7a WormBase:C53B4.7b WormBase:C53B4.7c
WormBase:C53B4.7d WormBase:C53B4.7e GeneTree:ENSGT00440000033640
InParanoid:Q18801 OMA:IAYNLTD NextBio:898062 GO:GO:0042350
Uniprot:Q18801
Length = 399
Score = 152 (58.6 bits), Expect = 7.7e-08, P = 7.7e-08
Identities = 52/184 (28%), Positives = 85/184 (46%)
Query: 122 LVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPS-LKRARQKLLQKH--QVFIVE-G 177
L+TG +G GS+ + L +G V G+ +S ++ + ++ + H F + G
Sbjct: 54 LITGISGQDGSYLAELLLSKGYKVHGIIRRSSSFNTARIEHLYSNPITHHGDSSFSLHYG 113
Query: 178 DLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEV---CKSV 234
D+ D+ L KL + T V HLAAQ+ V+ + P+ + G + LL+ C+ +
Sbjct: 114 DMTDSSCLIKLISTIEPTEVYHLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIHACR-L 172
Query: 235 NPQPSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGL-ALT 293
+ AS+S +YG ++P SE P S YA K G I Y Y + A
Sbjct: 173 TEKVRFYQASTSELYGKVQEIPQSEK-TPFYPRSPYAVAKMYGYWIVVNYREAYNMFACN 231
Query: 294 GLRF 297
G+ F
Sbjct: 232 GILF 235
>TIGR_CMR|SO_3188 [details] [associations]
symbol:SO_3188 "dTDP-glucose 4,6-dehydratase"
species:211586 "Shewanella oneidensis MR-1" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0008460
HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
PANTHER:PTHR10366:SF41 HSSP:P26391 RefSeq:NP_718744.1
ProteinModelPortal:Q8ECF4 SMR:Q8ECF4 GeneID:1170881
KEGG:son:SO_3188 PATRIC:23526058 OMA:NAARATW Uniprot:Q8ECF4
Length = 375
Score = 98 (39.6 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 36/148 (24%), Positives = 65/148 (43%)
Query: 119 MTVLVTGAAGFVGSHCSL-ALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEG 177
M +LVTG AGF+GS + D V+ +D Y +L+ F +
Sbjct: 1 MKILVTGGAGFIGSAVVRHIIGNTQDCVVNVDKLT--YAGNLESLTSVADSPRYTF-EKV 57
Query: 178 DLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQ 237
D+ D L ++F + V+HLAA++ V ++ ++ +NI G LLE + Q
Sbjct: 58 DICDRTELERVFSLHQPDAVMHLAAESHVDRSITGSADFIQTNIVGTYTLLEAARHYWMQ 117
Query: 238 PSIVWASSSSVYGLNTQVPFSESHRTDQ 265
+ S+ + ++T + + D+
Sbjct: 118 LNTERKSAFRFHHISTDEVYGDLPHPDE 145
Score = 98 (39.6 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 41/187 (21%), Positives = 76/187 (40%)
Query: 266 PASLYAATKKAGEEIAHTYNHIYGLALTGLRFFTVYGPWGRPDMAYFFFTKDILQGKTID 325
P+S Y+A+K + + + + YG YGP+ P+ + L+GK +
Sbjct: 181 PSSPYSASKASSDHLVRAWLRTYGFPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLP 240
Query: 326 VYKTQDDREVARDFTYIDDVVKGCVGALDTAXXXXXXXXXXXXPAQLRVYNLGNTSPVPV 385
+Y D RD+ Y++D + + + +N V V
Sbjct: 241 IYGKGDQ---IRDWLYVEDHARALFKVVTEGKVGETY--------NIGGHNEKRNLEV-V 288
Query: 386 GRLVSILENLL--NTKAKKHVIRMP-RNG-DVPYTHANVSLAYKDFGYKPTTDLAAGLRK 441
+ SIL++L+ NT + + + R G D Y ++ + ++P GLRK
Sbjct: 289 QTICSILDSLVPKNTPYAEQIAYVADRPGHDRRYAIDATKMS-AELDWQPQETFETGLRK 347
Query: 442 FVKWYVS 448
V+WY++
Sbjct: 348 TVEWYLA 354
>UNIPROTKB|Q06952 [details] [associations]
symbol:rfbD "Probable GDP-mannose 4,6-dehydratase"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=ISS]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005622 GO:GO:0009103 GO:GO:0019673
GO:GO:0042351 EMBL:X59554 PIR:S28470 RefSeq:NP_229900.1
ProteinModelPortal:Q06952 SMR:Q06952 DNASU:2614706 GeneID:2614706
KEGG:vch:VC0243 PATRIC:20079530 eggNOG:COG1089 KO:K01711
OMA:INPKYFR ProtClustDB:CLSK793536 BioCyc:MetaCyc:MONOMER-13574
GO:GO:0008446 TIGRFAMs:TIGR01472 Uniprot:Q06952
Length = 373
Score = 149 (57.5 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 55/187 (29%), Positives = 86/187 (45%)
Query: 117 NGMTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQV-FIV 175
N L+TG G GS+ + L ++G V G+ +S ++ K + V F +
Sbjct: 2 NKKVALITGITGQDGSYLAEFLLEKGYEVHGIKRRSSLFNTQRVDHLYKDPHEEDVNFKL 61
Query: 176 E-GDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVAS-NIAGFVNLLEVCK- 232
GDL D+ LT++ V V +L AQ+ V + Q+P+ Y A + G + LLE +
Sbjct: 62 HYGDLTDSSNLTRILAEVQPDEVYNLGAQSHVAVSFQSPE-YTADVDAIGTLRLLEAIRF 120
Query: 233 -SVNPQPSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGL- 290
+ + AS+S +YGL ++P E+ P S YA K I Y YG+
Sbjct: 121 LGLTKKTKFYQASTSELYGLVQEIPQKET-TPFYPRSPYAVAKMYAYWITINYRESYGIY 179
Query: 291 ALTGLRF 297
A G+ F
Sbjct: 180 ACNGILF 186
>TIGR_CMR|VC_0243 [details] [associations]
symbol:VC_0243 "GDP-mannose 4,6-dehydratase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005622 GO:GO:0009103 GO:GO:0019673
GO:GO:0042351 EMBL:X59554 PIR:S28470 RefSeq:NP_229900.1
ProteinModelPortal:Q06952 SMR:Q06952 DNASU:2614706 GeneID:2614706
KEGG:vch:VC0243 PATRIC:20079530 eggNOG:COG1089 KO:K01711
OMA:INPKYFR ProtClustDB:CLSK793536 BioCyc:MetaCyc:MONOMER-13574
GO:GO:0008446 TIGRFAMs:TIGR01472 Uniprot:Q06952
Length = 373
Score = 149 (57.5 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 55/187 (29%), Positives = 86/187 (45%)
Query: 117 NGMTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQV-FIV 175
N L+TG G GS+ + L ++G V G+ +S ++ K + V F +
Sbjct: 2 NKKVALITGITGQDGSYLAEFLLEKGYEVHGIKRRSSLFNTQRVDHLYKDPHEEDVNFKL 61
Query: 176 E-GDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVAS-NIAGFVNLLEVCK- 232
GDL D+ LT++ V V +L AQ+ V + Q+P+ Y A + G + LLE +
Sbjct: 62 HYGDLTDSSNLTRILAEVQPDEVYNLGAQSHVAVSFQSPE-YTADVDAIGTLRLLEAIRF 120
Query: 233 -SVNPQPSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGL- 290
+ + AS+S +YGL ++P E+ P S YA K I Y YG+
Sbjct: 121 LGLTKKTKFYQASTSELYGLVQEIPQKET-TPFYPRSPYAVAKMYAYWITINYRESYGIY 179
Query: 291 ALTGLRF 297
A G+ F
Sbjct: 180 ACNGILF 186
>TAIR|locus:2080933 [details] [associations]
symbol:MUR1 "MURUS 1" species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IEA;ISS;IDA] [GO:0019673 "GDP-mannose metabolic process"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009826 "unidimensional cell growth" evidence=IMP] [GO:0005829
"cytosol" evidence=IDA] [GO:0006007 "glucose catabolic process"
evidence=RCA] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IMP] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0005525
GO:GO:0005829 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009826 EMBL:AL132980
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 ProtClustDB:PLN02653
EMBL:U81805 EMBL:BT025710 EMBL:AY084574 IPI:IPI00519785 PIR:T45747
RefSeq:NP_190685.2 UniGene:At.23910 PDB:1N7G PDB:1N7H PDBsum:1N7G
PDBsum:1N7H ProteinModelPortal:P93031 SMR:P93031 STRING:P93031
PaxDb:P93031 PRIDE:P93031 EnsemblPlants:AT3G51160.1 GeneID:824280
KEGG:ath:AT3G51160 GeneFarm:4170 TAIR:At3g51160 InParanoid:P93031
OMA:DAIRDWG PhylomeDB:P93031 BioCyc:MetaCyc:AT3G51160-MONOMER
EvolutionaryTrace:P93031 Genevestigator:P93031 GermOnline:AT3G51160
Uniprot:P93031
Length = 373
Score = 149 (57.5 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 63/192 (32%), Positives = 91/192 (47%)
Query: 122 LVTGAAGFVGSHCSLALKKRGDGVLGL----DNFNS------YYDPSLKRARQKLLQKHQ 171
L+TG G GS+ + L +G V GL NFN+ Y DP + L++ H
Sbjct: 32 LITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPH--NVNKALMKLHY 89
Query: 172 VFIVEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIA-GFVNLLEV 230
DL DA L + DV+ V +LAAQ+ V + + P Y A +A G + LLE
Sbjct: 90 A-----DLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPD-YTADVVATGALRLLEA 143
Query: 231 CKS--VNPQPSIVW--ASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNH 286
+S ++ ++ + A SS ++G +T P SE+ P S YAA+K A Y
Sbjct: 144 VRSHTIDSGRTVKYYQAGSSEMFG-STPPPQSET-TPFHPRSPYAASKCAAHWYTVNYRE 201
Query: 287 IYGL-ALTGLRF 297
YGL A G+ F
Sbjct: 202 AYGLFACNGILF 213
>POMBASE|SPBPB2B2.11 [details] [associations]
symbol:SPBPB2B2.11 "nucleotide-sugar 4,6-dehydratase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006012 "galactose metabolic process" evidence=IEP] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0031506 "cell wall
glycoprotein biosynthetic process" evidence=NAS] [GO:0033554
"cellular response to stress" evidence=IEP] [GO:0042125 "protein
galactosylation" evidence=NAS] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005888
InterPro:IPR020904 Pfam:PF01370 InterPro:IPR016040
PomBase:SPBPB2B2.11 GO:GO:0005829 GO:GO:0005634 GO:GO:0033554
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
EMBL:CU329671 GO:GO:0016491 GO:GO:0055114 GO:GO:0006012
GO:GO:0042125 GO:GO:0031506 GO:GO:0008460 eggNOG:COG1088
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:NP_596857.1 HSSP:P26391 ProteinModelPortal:Q9HDU4
STRING:Q9HDU4 EnsemblFungi:SPBPB2B2.11.1 GeneID:2541398
KEGG:spo:SPBPB2B2.11 OMA:IQYVKDR OrthoDB:EOG4VX5DN NextBio:20802505
Uniprot:Q9HDU4
Length = 365
Score = 145 (56.1 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 52/195 (26%), Positives = 88/195 (45%)
Query: 122 LVTGAAGFVGSH-CSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGDL- 179
L+TG AGF+GS+ A+ K D + SY K+L + +E DL
Sbjct: 13 LITGGAGFIGSNFLDYAVDKYPDFHFTCIDKLSYVSNYTTVFLSKVLNQPNFRFLEMDLA 72
Query: 180 NDAPLLTKLF----DVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCK--- 232
+ L + ++ TH+++ AA++ V + +P + +NI NLLE +
Sbjct: 73 TNYKFLYQFMVEDSEINKITHIINFAAESSVDRSFIDPLYFTKNNILSTQNLLECVRILL 132
Query: 233 ----SVNPQPSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIY 288
+ + + V S+ VYG + + P S YAA+K A + I +Y + Y
Sbjct: 133 GKKEELRNRLNFVHVSTDEVYGEQDENASVDEKSKLNPTSPYAASKAAVDLIIQSYRYSY 192
Query: 289 GLALTGLRFFTVYGP 303
+++T +R VYGP
Sbjct: 193 KISVTVIRANNVYGP 207
>UNIPROTKB|C9JW33 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040
GO:GO:0005739 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 EMBL:AC018878 HOGENOM:HOG000168004 GO:GO:0048040
HGNC:HGNC:17729 IPI:IPI00916527 ProteinModelPortal:C9JW33
SMR:C9JW33 STRING:C9JW33 Ensembl:ENST00000457835
ArrayExpress:C9JW33 Bgee:C9JW33 Uniprot:C9JW33
Length = 190
Score = 133 (51.9 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 48/168 (28%), Positives = 77/168 (45%)
Query: 121 VLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGDLN 180
+L+TG AGFVGSH + L G V +DNF + KR + + ++ D+
Sbjct: 34 ILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFT----GRKRNVEHWIGHENFELINHDVV 89
Query: 181 DAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQPSI 240
+ PL ++ + HLA+ A M NP + +N G +N+L + K V + +
Sbjct: 90 E-PLYIEV------DQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--L 140
Query: 241 VWASSSSVYGLNTQVPFSESH----RTDQPASLYAATKKAGEEIAHTY 284
+ AS+S VYG P SE + P + Y K+ E + + Y
Sbjct: 141 LLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAY 188
>UNIPROTKB|P95780 [details] [associations]
symbol:rmlB "dTDP-glucose 4,6-dehydratase" species:210007
"Streptococcus mutans UA159" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103 EMBL:AE014133
GenomeReviews:AE014133_GR GO:GO:0045226 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305 KO:K01710
PANTHER:PTHR10366:SF41 EMBL:D78182 RefSeq:NP_721810.1 PDB:1KEP
PDB:1KET PDBsum:1KEP PDBsum:1KET ProteinModelPortal:P95780
SMR:P95780 EnsemblBacteria:EBSTRT00000013418 GeneID:1028708
KEGG:smu:SMU_1457 PATRIC:19664935 OMA:HEDWWKA
ProtClustDB:CLSK877134 EvolutionaryTrace:P95780 Uniprot:P95780
Length = 348
Score = 144 (55.7 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 88/345 (25%), Positives = 144/345 (41%)
Query: 121 VLVTGAAGFVGSH-CSLALKKRGD-GVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGD 178
++VTG AGF+GS+ D V LD +Y RA + + +V +V GD
Sbjct: 7 IIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKL-TYAG---NRANLEEILGDRVELVVGD 62
Query: 179 LNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQP 238
+ D+ L+ KL ++H AA++ ++++P ++ +N G LLE + + +
Sbjct: 63 IADSELVDKL--AAKADAIVHYAAESHNDNSLKDPSPFIYTNFVGTYILLEAARKYDIRF 120
Query: 239 SIVWASSSSVYG---LNTQVPF-----SESHRTD---QPASLYAATKKAGEEIAHTYNHI 287
V S+ VYG L +P E + P+S Y++TK A + I +
Sbjct: 121 HHV--STDEVYGDLPLREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASDLIVKAWVRS 178
Query: 288 YGLALTGLRFFTVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVK 347
+G+ T YGP+ + +IL G +Y + + V RD+ + +D
Sbjct: 179 FGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYG--EGKNV-RDWIHTNDHST 235
Query: 348 GCVGALDTAXXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILENLLNTK-AKKHVIR 406
G V A+ T + N V L ILE + K A HV
Sbjct: 236 G-VWAILTKGRIGETYLIGADGEK-------NNKEV----LELILEKMSQPKNAYDHVT- 282
Query: 407 MPRNG-DVPYTHANVSLAYKDFGYKPT-TDLAAGLRKFVKWYVSY 449
R G D+ Y + L ++ G+KP T+ GL +KWY +
Sbjct: 283 -DRAGHDLRYAIDSTKLR-EELGWKPQFTNFEEGLEDTIKWYTEH 325
>TIGR_CMR|GSU_0626 [details] [associations]
symbol:GSU_0626 "GDP-mannose 4,6-dehydratase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0019673
KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
RefSeq:NP_951684.1 ProteinModelPortal:Q74FI2 SMR:Q74FI2
GeneID:2685242 KEGG:gsu:GSU0626 PATRIC:22024003 OMA:YACAKAY
ProtClustDB:CLSK827959 BioCyc:GSUL243231:GH27-625-MONOMER
Uniprot:Q74FI2
Length = 349
Score = 143 (55.4 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 52/181 (28%), Positives = 79/181 (43%)
Query: 122 LVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQ----VFIVEG 177
L+TG +G GS+ + L +G V G+ +S ++ R H+ +F+ G
Sbjct: 5 LITGISGQDGSYLAELLLGKGYEVHGVIRRSSSFNTG--RIDHLYRDPHEPDVRLFLHYG 62
Query: 178 DLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQ 237
DLNDA + ++ V + +L AQ+ VR + P+ + G V LLE +
Sbjct: 63 DLNDASSINRVLREVRPDEIYNLGAQSHVRVSFDVPEYTGEIDALGTVRLLEGIRETGLN 122
Query: 238 PSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGL-ALTGLR 296
ASSS +YG + P E+ P S YA K I Y YG+ A G+
Sbjct: 123 TRFYQASSSELYGKVVETPQKET-TPFYPRSPYACAKAYAYYITVNYRESYGMYACNGIL 181
Query: 297 F 297
F
Sbjct: 182 F 182
>RGD|1308676 [details] [associations]
symbol:Hsd3b2 "hydroxy-delta-5-steroid dehydrogenase, 3 beta-
and steroid delta-isomerase 2" species:10116 "Rattus norvegicus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA;ISO;IDA] [GO:0004769 "steroid delta-isomerase
activity" evidence=ISO;IDA] [GO:0005496 "steroid binding"
evidence=IPI] [GO:0005739 "mitochondrion" evidence=ISO] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0006082 "organic
acid metabolic process" evidence=IEP] [GO:0006694 "steroid
biosynthetic process" evidence=IEA;ISO] [GO:0006701 "progesterone
biosynthetic process" evidence=IEP;IDA] [GO:0006703 "estrogen
biosynthetic process" evidence=IEP] [GO:0008202 "steroid metabolic
process" evidence=IDA] [GO:0008207 "C21-steroid hormone metabolic
process" evidence=IDA] [GO:0008584 "male gonad development"
evidence=IEP] [GO:0008585 "female gonad development" evidence=IEP]
[GO:0009635 "response to herbicide" evidence=IEP] [GO:0010033
"response to organic substance" evidence=IEP] [GO:0010038 "response
to metal ion" evidence=IEP] [GO:0010226 "response to lithium ion"
evidence=IEP] [GO:0010288 "response to lead ion" evidence=IEP]
[GO:0014070 "response to organic cyclic compound" evidence=IEP]
[GO:0014823 "response to activity" evidence=IEP] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016101 "diterpenoid
metabolic process" evidence=IEP] [GO:0017143 "insecticide metabolic
process" evidence=IEP] [GO:0018879 "biphenyl metabolic process"
evidence=IEP] [GO:0018894 "dibenzo-p-dioxin metabolic process"
evidence=IEP] [GO:0018958 "phenol-containing compound metabolic
process" evidence=IEP] [GO:0018970 "toluene metabolic process"
evidence=IEP] [GO:0021766 "hippocampus development" evidence=IEP]
[GO:0030061 "mitochondrial crista" evidence=IDA] [GO:0030325
"adrenal gland development" evidence=IEP] [GO:0030728 "ovulation"
evidence=IEP] [GO:0030851 "granulocyte differentiation"
evidence=IEP] [GO:0031667 "response to nutrient levels"
evidence=IEP] [GO:0032355 "response to estradiol stimulus"
evidence=IEP] [GO:0032869 "cellular response to insulin stimulus"
evidence=IEP] [GO:0033197 "response to vitamin E" evidence=IEP]
[GO:0033327 "Leydig cell differentiation" evidence=IEP] [GO:0033591
"response to L-ascorbic acid" evidence=IEP] [GO:0035410
"dihydrotestosterone 17-beta-dehydrogenase activity" evidence=IDA]
[GO:0042493 "response to drug" evidence=IEP] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
[GO:0043279 "response to alkaloid" evidence=IEP] [GO:0044344
"cellular response to fibroblast growth factor stimulus"
evidence=IEP] [GO:0045471 "response to ethanol" evidence=IEP]
[GO:0046470 "phosphatidylcholine metabolic process" evidence=IEP]
[GO:0046685 "response to arsenic-containing substance"
evidence=IEP] [GO:0046686 "response to cadmium ion" evidence=IEP]
[GO:0050756 "fractalkine metabolic process" evidence=IEP]
[GO:0051287 "NAD binding" evidence=IDA] [GO:0051412 "response to
corticosterone stimulus" evidence=IEP] [GO:0051592 "response to
calcium ion" evidence=IEP] [GO:0060135 "maternal process involved
in female pregnancy" evidence=IEP] [GO:0060992 "response to
fungicide" evidence=IEP] [GO:0061370 "testosterone biosynthetic
process" evidence=IEP] [GO:0070301 "cellular response to hydrogen
peroxide" evidence=IEP] [GO:0070542 "response to fatty acid"
evidence=IEP] [GO:0071236 "cellular response to antibiotic"
evidence=IEP] [GO:0071288 "cellular response to mercury ion"
evidence=IEP] [GO:0071320 "cellular response to cAMP" evidence=IEP]
[GO:0071333 "cellular response to glucose stimulus" evidence=IEP]
[GO:0071371 "cellular response to gonadotropin stimulus"
evidence=IEP] [GO:0071372 "cellular response to
follicle-stimulating hormone stimulus" evidence=IEP] [GO:0071373
"cellular response to luteinizing hormone stimulus" evidence=IEP]
[GO:0071406 "cellular response to methylmercury" evidence=IEP]
[GO:0071549 "cellular response to dexamethasone stimulus"
evidence=IEP] [GO:0071560 "cellular response to transforming growth
factor beta stimulus" evidence=IEP] InterPro:IPR002225 Pfam:PF01073
UniPathway:UPA00062 InterPro:IPR016040 RGD:1308676 GO:GO:0016021
GO:GO:0046686 GO:GO:0021766 CTD:3283 eggNOG:COG0451
HOGENOM:HOG000167989 HOVERGEN:HBG000014 KO:K00070 GO:GO:0003854
GO:GO:0004769 GO:GO:0006703 Gene3D:3.40.50.720 GO:GO:0005789
EMBL:M38178 EMBL:BC086578 EMBL:DQ515797 IPI:IPI00362470 PIR:A39051
RefSeq:NP_001007720.3 UniGene:Rn.128814 ProteinModelPortal:P22071
STRING:P22071 Ensembl:ENSRNOT00000026325 GeneID:360348
KEGG:rno:360348 UCSC:RGD:1308676 InParanoid:P22071 OMA:WVFPRIA
BRENDA:5.3.3.1 NextBio:672781 ArrayExpress:P22071
Genevestigator:P22071 GermOnline:ENSRNOG00000019454 GO:GO:0030061
GO:GO:0035410 GO:GO:0051287 GO:GO:0005496 GO:GO:0030325
GO:GO:0018879 GO:GO:0071236 GO:GO:0071320 GO:GO:0071549
GO:GO:0044344 GO:GO:0071372 GO:GO:0071333 GO:GO:0070301
GO:GO:0032869 GO:GO:0071373 GO:GO:0071288 GO:GO:0071406
GO:GO:0071560 GO:GO:0018894 GO:GO:0016101 GO:GO:0008585
GO:GO:0050756 GO:GO:0030851 GO:GO:0017143 GO:GO:0033327
GO:GO:0060135 GO:GO:0006082 GO:GO:0030728 GO:GO:0018958
GO:GO:0046470 GO:GO:0006701 GO:GO:0014823 GO:GO:0043279
GO:GO:0046685 GO:GO:0051592 GO:GO:0051412 GO:GO:0042493
GO:GO:0032355 GO:GO:0045471 GO:GO:0070542 GO:GO:0060992
GO:GO:0009635 GO:GO:0033591 GO:GO:0010288 GO:GO:0010226
GO:GO:0033197 GO:GO:0061370 GO:GO:0018970 Uniprot:P22071
Length = 373
Score = 142 (55.0 bits), Expect = 8.8e-07, P = 8.8e-07
Identities = 49/169 (28%), Positives = 75/169 (44%)
Query: 118 GMTVLVTGAAGFVGSHC--SLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIV 175
G + LVTGA GFVG L +K V LD + P K KL K +V ++
Sbjct: 3 GWSCLVTGAGGFVGQRIIRMLVQEKELQEVRALDKV---FRPETKEEFSKLQTKAKVTML 59
Query: 176 EGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVN 235
EGD+ DA L + + V+H AA V + + Q+ + N+ G N+LE C +
Sbjct: 60 EGDILDAQYLRRACQGISV--VIHTAAVIDVSHVLPR-QTILDVNLKGTQNILEACVEAS 116
Query: 236 PQPSIVWASSSSVYGLNTQVPF-----SESHRTDQPASLYAATKKAGEE 279
P+ ++ S+ V G N+ E H + Y +K+ E+
Sbjct: 117 V-PAFIYCSTVDVAGPNSYKKIILNGHEEEHHESTWSDAYPYSKRMAEK 164
>UNIPROTKB|P14060 [details] [associations]
symbol:HSD3B1 "3 beta-hydroxysteroid dehydrogenase/Delta
5-->4-isomerase type 1" species:9606 "Homo sapiens" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0006702 "androgen biosynthetic process"
evidence=TAS] [GO:0006703 "estrogen biosynthetic process"
evidence=TAS] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=ISS] [GO:0006694 "steroid
biosynthetic process" evidence=ISS] [GO:0030868 "smooth endoplasmic
reticulum membrane" evidence=ISS] [GO:0005758 "mitochondrial
intermembrane space" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0004769 "steroid delta-isomerase
activity" evidence=ISS] [GO:0005789 "endoplasmic reticulum
membrane" evidence=TAS] [GO:0006704 "glucocorticoid biosynthetic
process" evidence=TAS] [GO:0006705 "mineralocorticoid biosynthetic
process" evidence=TAS] [GO:0008202 "steroid metabolic process"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] Reactome:REACT_111217 InterPro:IPR002225 Pfam:PF01073
UniPathway:UPA00062 InterPro:IPR016040 GO:GO:0016021 EMBL:M27137
EMBL:M28392 EMBL:M28162 EMBL:M28391 EMBL:X53321 EMBL:M35493
EMBL:M63397 EMBL:M63395 EMBL:M63396 EMBL:M38180 EMBL:X55997
EMBL:S45679 EMBL:AK291556 EMBL:BC031999 IPI:IPI00843838 PIR:A36551
RefSeq:NP_000853.1 UniGene:Hs.364941 ProteinModelPortal:P14060
SMR:P14060 STRING:P14060 PhosphoSite:P14060 DMDM:112767
PRIDE:P14060 DNASU:3283 Ensembl:ENST00000369413
Ensembl:ENST00000528909 GeneID:3283 KEGG:hsa:3283 UCSC:uc001ehv.1
CTD:3283 GeneCards:GC01P120049 H-InvDB:HIX0028579 HGNC:HGNC:5217
MIM:109715 neXtProt:NX_P14060 PharmGKB:PA29486 eggNOG:COG0451
HOGENOM:HOG000167989 HOVERGEN:HBG000014 InParanoid:P14060 KO:K00070
OrthoDB:EOG4K3KWG PhylomeDB:P14060 BioCyc:MetaCyc:HS08829-MONOMER
BRENDA:1.1.1.145 Reactome:REACT_15493 SABIO-RK:P14060
BindingDB:P14060 ChEMBL:CHEMBL1958 DrugBank:DB00157
DrugBank:DB01108 GenomeRNAi:3283 NextBio:13031 ArrayExpress:P14060
Bgee:P14060 CleanEx:HS_HSD3B1 Genevestigator:P14060
GermOnline:ENSG00000203857 GO:GO:0005743 GO:GO:0005758
GO:GO:0030868 GO:GO:0003854 GO:GO:0000166 GO:GO:0004769
GO:GO:0006702 GO:GO:0006703 GO:GO:0006704 GO:GO:0006705
GO:GO:0044281 Gene3D:3.40.50.720 Uniprot:P14060
Length = 373
Score = 140 (54.3 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 53/199 (26%), Positives = 89/199 (44%)
Query: 118 GMTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEG 177
G + LVTGA GF+G L K + + + + + P L+ KL K ++ ++EG
Sbjct: 3 GWSCLVTGAGGFLGQRIIRLLVKEKE-LKEIRVLDKAFGPELREEFSKLQNKTKLTVLEG 61
Query: 178 DLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQ 237
D+ D P L + V ++H A V + + + +S + N+ G LLE C +
Sbjct: 62 DILDEPFLKRACQDVSV--IIHTACIIDV-FGVTHRESIMNVNVKGTQLLLEACVQASV- 117
Query: 238 PSIVWASSSSVYGLNTQVPFSESHRTDQPA-----SLYAATKKAGEEI---AHTYNHIYG 289
P ++ SS V G N+ ++ ++P + Y +KK E+ A+ +N G
Sbjct: 118 PVFIYTSSIEVAGPNSYKEIIQNGHEEEPLENTWPAPYPHSKKLAEKAVLAANGWNLKNG 177
Query: 290 --LALTGLRFFTVYGPWGR 306
L LR +YG R
Sbjct: 178 GTLYTCALRPMYIYGEGSR 196
Score = 42 (19.8 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 18/66 (27%), Positives = 29/66 (43%)
Query: 385 VGRLVSILENLLNTKAKKHVIRMPRNGD-VPYTHANVSLAYK----DFGYKPTTDLAAGL 439
+G L+ I+ LL + R P N V +++ + +YK D YKP
Sbjct: 294 IGFLLEIVSFLLRPI---YTYRPPFNRHIVTLSNSVFTFSYKKAQRDLAYKPLYSWEEAK 350
Query: 440 RKFVKW 445
+K V+W
Sbjct: 351 QKTVEW 356
>UNIPROTKB|Q5TDG2 [details] [associations]
symbol:HSD3B1 "3 beta-hydroxysteroid dehydrogenase/Delta
5-->4-isomerase type 1" species:9606 "Homo sapiens" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040
UniGene:Hs.364941 HGNC:HGNC:5217 HOGENOM:HOG000167989
HOVERGEN:HBG000014 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
OMA:MAGWSCL GO:GO:0006694 GO:GO:0016853 EMBL:AL121995
IPI:IPI00246994 ProteinModelPortal:Q5TDG2 SMR:Q5TDG2 STRING:Q5TDG2
PRIDE:Q5TDG2 Ensembl:ENST00000235547 ArrayExpress:Q5TDG2
Bgee:Q5TDG2 Uniprot:Q5TDG2
Length = 375
Score = 140 (54.3 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 53/199 (26%), Positives = 89/199 (44%)
Query: 118 GMTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEG 177
G + LVTGA GF+G L K + + + + + P L+ KL K ++ ++EG
Sbjct: 5 GWSCLVTGAGGFLGQRIIRLLVKEKE-LKEIRVLDKAFGPELREEFSKLQNKTKLTVLEG 63
Query: 178 DLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQ 237
D+ D P L + V ++H A V + + + +S + N+ G LLE C +
Sbjct: 64 DILDEPFLKRACQDVSV--IIHTACIIDV-FGVTHRESIMNVNVKGTQLLLEACVQASV- 119
Query: 238 PSIVWASSSSVYGLNTQVPFSESHRTDQPA-----SLYAATKKAGEEI---AHTYNHIYG 289
P ++ SS V G N+ ++ ++P + Y +KK E+ A+ +N G
Sbjct: 120 PVFIYTSSIEVAGPNSYKEIIQNGHEEEPLENTWPAPYPHSKKLAEKAVLAANGWNLKNG 179
Query: 290 --LALTGLRFFTVYGPWGR 306
L LR +YG R
Sbjct: 180 GTLYTCALRPMYIYGEGSR 198
Score = 42 (19.8 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 18/66 (27%), Positives = 29/66 (43%)
Query: 385 VGRLVSILENLLNTKAKKHVIRMPRNGD-VPYTHANVSLAYK----DFGYKPTTDLAAGL 439
+G L+ I+ LL + R P N V +++ + +YK D YKP
Sbjct: 296 IGFLLEIVSFLLRPI---YTYRPPFNRHIVTLSNSVFTFSYKKAQRDLAYKPLYSWEEAK 352
Query: 440 RKFVKW 445
+K V+W
Sbjct: 353 QKTVEW 358
>UNIPROTKB|P72586 [details] [associations]
symbol:rfbD "GDP-D-mannose dehydratase" species:1111708
"Synechocystis sp. PCC 6803 substr. Kazusa" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0005622 EMBL:BA000022 GenomeReviews:BA000022_GR
GO:GO:0019673 eggNOG:COG1089 KO:K01711 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 HSSP:P32054 PIR:S74433
RefSeq:NP_439905.1 RefSeq:YP_005649960.1 ProteinModelPortal:P72586
SMR:P72586 IntAct:P72586 STRING:P72586 GeneID:12255298
GeneID:951882 KEGG:syn:sll1212 KEGG:syy:SYNGTS_0007 PATRIC:23836866
ProtClustDB:CLSK892430 Uniprot:P72586
Length = 362
Score = 139 (54.0 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 58/192 (30%), Positives = 84/192 (43%)
Query: 121 VLVTGAAGFVGSHCSLALKKRGDGVLGL----DNFNS------YYDPSLKRARQKLLQKH 170
VL+TG G GS+ S L ++G V G+ FN+ Y DP A+ +L H
Sbjct: 7 VLLTGITGQDGSYLSELLLEKGYQVHGIIRRTSTFNTDRIDHLYVDPHDLEAKLRL---H 63
Query: 171 QVFIVEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEV 230
GDL D L ++ + V T + +L AQ+ VR + +P+ V S G + LLE
Sbjct: 64 Y-----GDLTDGTTLRRILEDVKPTEIYNLGAQSHVRVSFDSPEYTVDSVAMGTLRLLEA 118
Query: 231 CKSVNPQPSI----VWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNH 286
+ + I A SS ++G ++P E+ P S YA K G Y
Sbjct: 119 IRDYQHRTGIQVRFYQAGSSEMFGKVQEIPQKET-TPFYPRSPYACAKVYGHWQTVNYRE 177
Query: 287 IYGL-ALTGLRF 297
Y L A G+ F
Sbjct: 178 SYDLFACNGILF 189
>MGI|MGI:96233 [details] [associations]
symbol:Hsd3b1 "hydroxy-delta-5-steroid dehydrogenase, 3 beta-
and steroid delta-isomerase 1" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=ISO] [GO:0004769 "steroid delta-isomerase activity"
evidence=ISO] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=ISO] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0016616 "oxidoreductase activity,
acting on the CH-OH group of donors, NAD or NADP as acceptor"
evidence=IEA] [GO:0016853 "isomerase activity" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=ISO]
InterPro:IPR002225 Pfam:PF01073 UniPathway:UPA00062
InterPro:IPR016040 MGI:MGI:96233 GO:GO:0016021 GO:GO:0005739
CTD:3283 eggNOG:COG0451 HOVERGEN:HBG000014 KO:K00070 GO:GO:0003854
GO:GO:0000166 GO:GO:0004769 Gene3D:3.40.50.720 EMBL:M58567
EMBL:BC052659 IPI:IPI00229070 PIR:I49762 RefSeq:NP_032319.1
UniGene:Mm.140811 ProteinModelPortal:P24815 SMR:P24815
STRING:P24815 PhosphoSite:P24815 PaxDb:P24815 PRIDE:P24815
Ensembl:ENSMUST00000107016 GeneID:15492 KEGG:mmu:15492
InParanoid:P24815 OMA:MAGWSCL SABIO-RK:P24815 NextBio:288366
Bgee:P24815 Genevestigator:P24815 GermOnline:ENSMUSG00000027871
GO:GO:0005789 GO:GO:0031966 GO:GO:0006694 Uniprot:P24815
Length = 373
Score = 139 (54.0 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 46/138 (33%), Positives = 65/138 (47%)
Query: 118 GMTVLVTGAAGFVGSHC--SLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIV 175
G + LVTGA GFVG L +K V LD + P K KL K +V ++
Sbjct: 3 GWSCLVTGAGGFVGQRIIKMLVQEKELQEVRALDKV---FRPETKEEFSKLQTKTKVTVL 59
Query: 176 EGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVN 235
EGD+ DA L + + V+H AA V + Q+ + N+ G NLLE C +
Sbjct: 60 EGDILDAQCLRRACQGISV--VIHTAAVIDVTGVIPR-QTILDVNLKGTQNLLEACVQAS 116
Query: 236 PQPSIVWASSSSVYGLNT 253
P+ ++ SS V G N+
Sbjct: 117 V-PAFIFCSSVDVAGPNS 133
Score = 41 (19.5 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 10/44 (22%), Positives = 21/44 (47%)
Query: 402 KHVIRMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKW 445
+H+I + N +++ A +D GY+P + +K +W
Sbjct: 317 RHLITLS-NSTFTFSYKK---AQRDLGYEPLVNWEEAKQKTSEW 356
>UNIPROTKB|P71790 [details] [associations]
symbol:gmdA "GDP-D-mannose dehydratase gmdA (GDP-mannose
4,6 dehydratase) (GMD)" species:83332 "Mycobacterium tuberculosis
H37Rv" [GO:0005886 "plasma membrane" evidence=IDA] [GO:0071456
"cellular response to hypoxia" evidence=IEP] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 InterPro:IPR016040 GO:GO:0005886
GenomeReviews:AL123456_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:BX842576 GO:GO:0071456 GO:GO:0005622
GO:GO:0019673 KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472
HOGENOM:HOG000168003 OMA:DAIRDWG HSSP:P32054 EMBL:CP003248
PIR:B70714 RefSeq:NP_216027.1 RefSeq:YP_006514898.1
ProteinModelPortal:P71790 SMR:P71790 PRIDE:P71790
EnsemblBacteria:EBMYCT00000003919 GeneID:13320108 GeneID:886529
KEGG:mtu:Rv1511 KEGG:mtv:RVBD_1511 PATRIC:18151910
TubercuList:Rv1511 ProtClustDB:CLSK791213 Uniprot:P71790
Length = 340
Score = 137 (53.3 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 66/243 (27%), Positives = 98/243 (40%)
Query: 122 LVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQ----VFIVEG 177
L+TG G GS+ + L +G V GL S ++ S R + HQ +F+ G
Sbjct: 5 LITGITGQDGSYLAELLLAKGYEVHGLIRRASTFNTS--RIDHLYVDPHQPGARLFLHYG 62
Query: 178 DLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQ 237
DL D L L + V +LAAQ+ VR + P + G + LLE +
Sbjct: 63 DLIDGTRLVTLLSTIEPDEVYNLAAQSHVRVSFDEPVHTGDTTGMGSMRLLEAVRLSRVH 122
Query: 238 PSIVWASSSSVYGLNTQVPFSESHRTD-QPASLYAATKKAGEEIAHTYNHIYGL-ALTGL 295
ASSS ++G + P ++ T P S Y A K Y YGL A+ G+
Sbjct: 123 CRFYQASSSEMFGAS---PPPQNELTPFYPRSPYGAAKVYSYWATRNYREAYGLFAVNGI 179
Query: 296 RFFTVYGPWGRPDMAYFFFTKDILQ---GKTIDVYKTQDDREVARDFTYIDDVVKGCVGA 352
F P T+ + + G +VY + + RD+ Y + V+G
Sbjct: 180 -LFNHESPRRGETFVTRKITRAVARIKAGIQSEVY--MGNLDAVRDWGYAPEYVEGMWRM 236
Query: 353 LDT 355
L T
Sbjct: 237 LQT 239
>WB|WBGene00010166 [details] [associations]
symbol:gmd-2 species:6239 "Caenorhabditis elegans"
[GO:0019673 "GDP-mannose metabolic process" evidence=IEA;IDA]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IEA;IDA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0009058 "biosynthetic process"
evidence=IEA] [GO:0008831 "dTDP-4-dehydrorhamnose reductase
activity" evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0018991
"oviposition" evidence=IMP] [GO:0042350 "GDP-L-fucose biosynthetic
process" evidence=IDA] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0040007
GO:GO:0018991 GO:GO:0002119 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0010171 GO:GO:0040011 GO:GO:0005622
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
GeneTree:ENSGT00440000033640 GO:GO:0042350 OMA:DAIRDWG EMBL:Z81553
EMBL:AM231685 PIR:T22798 RefSeq:NP_493106.1 UniGene:Cel.18597
ProteinModelPortal:O45583 SMR:O45583 STRING:O45583 PaxDb:O45583
EnsemblMetazoa:F56H6.5 GeneID:186416 KEGG:cel:CELE_F56H6.5
UCSC:F56H6.5 CTD:186416 WormBase:F56H6.5 InParanoid:O45583
NextBio:931756 Uniprot:O45583
Length = 382
Score = 137 (53.3 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 55/188 (29%), Positives = 84/188 (44%)
Query: 122 LVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQV-------FI 174
L+TG G GS+ + L +G V G+ +S S AR + L + V F
Sbjct: 37 LITGITGQDGSYLAELLLSKGYKVHGIIRRSS----SFNTARIEHLYGNPVTHNGSASFS 92
Query: 175 VE-GDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEV--- 230
+ GD+ D+ L KL + T + HLAAQ+ V+ + P+ + G + LL+
Sbjct: 93 LHYGDMTDSSCLIKLISTIEPTEIYHLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIHA 152
Query: 231 CKSVNPQPSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGL 290
C+ + + AS+S +YG ++P SE P S YA K G I Y Y +
Sbjct: 153 CR-LTEKVRFYQASTSELYGKVQEIPQSEL-TPFYPRSPYAVAKMYGYWIVVNYREAYKM 210
Query: 291 -ALTGLRF 297
A G+ F
Sbjct: 211 FACNGILF 218
>UNIPROTKB|O45583 [details] [associations]
symbol:gmd-2 "GDP-mannose 4,6 dehydratase 2" species:6239
"Caenorhabditis elegans" [GO:0019673 "GDP-mannose metabolic
process" evidence=IDA] [GO:0008446 "GDP-mannose 4,6-dehydratase
activity" evidence=IDA] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0040007
GO:GO:0018991 GO:GO:0002119 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0010171 GO:GO:0040011 GO:GO:0005622
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
GeneTree:ENSGT00440000033640 GO:GO:0042350 OMA:DAIRDWG EMBL:Z81553
EMBL:AM231685 PIR:T22798 RefSeq:NP_493106.1 UniGene:Cel.18597
ProteinModelPortal:O45583 SMR:O45583 STRING:O45583 PaxDb:O45583
EnsemblMetazoa:F56H6.5 GeneID:186416 KEGG:cel:CELE_F56H6.5
UCSC:F56H6.5 CTD:186416 WormBase:F56H6.5 InParanoid:O45583
NextBio:931756 Uniprot:O45583
Length = 382
Score = 137 (53.3 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 55/188 (29%), Positives = 84/188 (44%)
Query: 122 LVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQV-------FI 174
L+TG G GS+ + L +G V G+ +S S AR + L + V F
Sbjct: 37 LITGITGQDGSYLAELLLSKGYKVHGIIRRSS----SFNTARIEHLYGNPVTHNGSASFS 92
Query: 175 VE-GDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEV--- 230
+ GD+ D+ L KL + T + HLAAQ+ V+ + P+ + G + LL+
Sbjct: 93 LHYGDMTDSSCLIKLISTIEPTEIYHLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIHA 152
Query: 231 CKSVNPQPSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGL 290
C+ + + AS+S +YG ++P SE P S YA K G I Y Y +
Sbjct: 153 CR-LTEKVRFYQASTSELYGKVQEIPQSEL-TPFYPRSPYAVAKMYGYWIVVNYREAYKM 210
Query: 291 -ALTGLRF 297
A G+ F
Sbjct: 211 FACNGILF 218
>UNIPROTKB|Q9HTB6 [details] [associations]
symbol:rmd "GDP-6-deoxy-D-mannose reductase" species:208964
"Pseudomonas aeruginosa PAO1" [GO:0033705
"GDP-4-dehydro-6-deoxy-D-mannose reductase activity" evidence=IDA]
[GO:0055114 "oxidation-reduction process" evidence=IDA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 PseudoCAP:PA5454
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
EMBL:AE004091 GenomeReviews:AE004091_GR GO:GO:0033705 EMBL:AF009955
PIR:H82964 RefSeq:NP_254141.1 HSSP:P27830 ProteinModelPortal:Q9HTB6
SMR:Q9HTB6 GeneID:883037 KEGG:pae:PA5454 PATRIC:19845791
HOGENOM:HOG000167992 OMA:NLLEACA ProtClustDB:CLSK869364
Uniprot:Q9HTB6
Length = 304
Score = 128 (50.1 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 46/173 (26%), Positives = 76/173 (43%)
Query: 178 DLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQ 237
DL + L L+ +P V+HLA Q V A ++P + N+ G +NLL+ K+
Sbjct: 39 DLLEPDSLGDLWPELPDA-VIHLAGQTYVPEAFRDPARTLQINLLGTLNLLQALKARGFS 97
Query: 238 PSIVWASSSSVYG--LNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGL 295
+ ++ SS VYG +P E P + YA +K A E + + G +
Sbjct: 98 GTFLYISSGDVYGQVAEAALPIHEE-LIPHPRNPYAVSKLAAESLCLQWGITEGWRVLVA 156
Query: 296 RFFTVYGPWGRPDMAYFFFTKDILQGKT-IDVYKTQ-DDREVARDFTYIDDVV 346
R F GP + + I + K + + + D +V+RDF + DV+
Sbjct: 157 RPFNHIGPGQKDSFVIASAARQIARMKQGLQANRLEVGDIDVSRDFLDVQDVL 209
Score = 46 (21.3 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 121 VLVTGAAGFVGSH 133
+ VTG +GFVG H
Sbjct: 5 LFVTGLSGFVGKH 17
>UNIPROTKB|Q5QP01 [details] [associations]
symbol:HSD3B2 "3 beta-hydroxysteroid dehydrogenase/Delta
5-->4-isomerase type 2" species:9606 "Homo sapiens" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040
HOGENOM:HOG000167989 HOVERGEN:HBG000014 OrthoDB:EOG4K3KWG
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
EMBL:AL359553 UniGene:Hs.654399 HGNC:HGNC:5218 GO:GO:0016853
IPI:IPI00642070 SMR:Q5QP01 STRING:Q5QP01 Ensembl:ENST00000433745
Uniprot:Q5QP01
Length = 195
Score = 127 (49.8 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 51/198 (25%), Positives = 88/198 (44%)
Query: 118 GMTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEG 177
G + LVTGA G +G L + + + + + + P L+ KL + ++ ++EG
Sbjct: 2 GWSCLVTGAGGLLGQRIVRLLVEEKE-LKEIRALDKAFRPELREEFSKLQNRTKLTVLEG 60
Query: 178 DLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQ 237
D+ D P L + V V+H A V + + + +S + N+ G LLE C +
Sbjct: 61 DILDEPFLKRACQDVSV--VIHTACIIDV-FGVTHRESIMNVNVKGTQLLLEACVQASV- 116
Query: 238 PSIVWASSSSVYGLNTQVPFSESHRTDQPA-----SLYAATKKAGEEI---AHTYNHIYG 289
P ++ SS V G N+ ++ ++P + Y +KK E+ A+ +N G
Sbjct: 117 PVFIYTSSIEVAGPNSYKEIIQNGHEEEPLENTWPTPYPYSKKLAEKAVLAANGWNLKNG 176
Query: 290 --LALTGLRFFTVYGPWG 305
L LR +YG G
Sbjct: 177 DTLYTCALRPTYIYGEGG 194
>FB|FBgn0031661 [details] [associations]
symbol:Gmd "GDP-mannose 4,6-dehydratase" species:7227
"Drosophila melanogaster" [GO:0008446 "GDP-mannose 4,6-dehydratase
activity" evidence=ISS;IDA] [GO:0042351 "'de novo' GDP-L-fucose
biosynthetic process" evidence=ISS] [GO:0005622 "intracellular"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0019673 "GDP-mannose metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0042350
"GDP-L-fucose biosynthetic process" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=IMP] [GO:2000035 "regulation of
stem cell division" evidence=IMP] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 EMBL:AE014134 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0007219 GO:GO:0005622 GO:GO:2000035
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 OMA:INPKYFR
GO:GO:0008446 TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640
GO:GO:0042350 CTD:33716 EMBL:AM231687 EMBL:AY089519
RefSeq:NP_608888.2 UniGene:Dm.4967 ProteinModelPortal:Q9VMW9
SMR:Q9VMW9 STRING:Q9VMW9 PaxDb:Q9VMW9 EnsemblMetazoa:FBtr0079049
GeneID:33716 KEGG:dme:Dmel_CG8890 FlyBase:FBgn0031661
InParanoid:Q9VMW9 OrthoDB:EOG40K6FB PhylomeDB:Q9VMW9
GenomeRNAi:33716 NextBio:784930 Bgee:Q9VMW9 GermOnline:CG8890
Uniprot:Q9VMW9
Length = 395
Score = 133 (51.9 bits), Expect = 9.9e-06, P = 9.9e-06
Identities = 53/190 (27%), Positives = 86/190 (45%)
Query: 122 LVTGAAGFVGSHCSLALKKRGDGVLGL----DNFNS------YYDPSL-KRARQKLLQKH 170
L+TG G GS+ + L K+ V G+ FN+ Y DP K R KL H
Sbjct: 50 LITGITGQDGSYLAEFLLKKDYEVHGIIRRASTFNTTRIEHLYADPKAHKGGRMKL---H 106
Query: 171 QVFIVEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEV 230
GD+ D+ L K+ ++V T + +LAAQ+ V+ + + + G + +L+
Sbjct: 107 Y-----GDMTDSSSLVKIINMVKPTEIYNLAAQSHVKVSFDLSEYTAEVDAVGTLRILDA 161
Query: 231 CKSVNPQPSIVW--ASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIY 288
++ + ++ + AS+S +YG + P +E P S YA K G I Y Y
Sbjct: 162 IRTCGMEKNVRFYQASTSELYGKVVETPQNEQ-TPFYPRSPYACAKMYGFWIVINYREAY 220
Query: 289 GL-ALTGLRF 297
+ A G+ F
Sbjct: 221 NMYACNGILF 230
>TAIR|locus:2056171 [details] [associations]
symbol:AT2G02400 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0009809 "lignin biosynthetic
process" evidence=ISS] [GO:0016621 "cinnamoyl-CoA reductase
activity" evidence=ISS] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005886 GO:GO:0003824 EMBL:CP002685 GenomeReviews:CT485783_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 EMBL:AC005312 HOGENOM:HOG000167998 EMBL:BT005781
EMBL:BT006079 EMBL:AK228447 IPI:IPI00542037 PIR:C84436
RefSeq:NP_178345.1 UniGene:At.41493 UniGene:At.69541
ProteinModelPortal:Q9ZVQ2 SMR:Q9ZVQ2 STRING:Q9ZVQ2 PaxDb:Q9ZVQ2
PRIDE:Q9ZVQ2 DNASU:814771 EnsemblPlants:AT2G02400.1 GeneID:814771
KEGG:ath:AT2G02400 TAIR:At2g02400 InParanoid:Q9ZVQ2 OMA:NGFIGSW
PhylomeDB:Q9ZVQ2 ProtClustDB:CLSN2683687 ArrayExpress:Q9ZVQ2
Genevestigator:Q9ZVQ2 Uniprot:Q9ZVQ2
Length = 318
Score = 130 (50.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 62/245 (25%), Positives = 106/245 (43%)
Query: 120 TVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGDL 179
TV VTGA GF+GS L ++G + + DP+ Q ++ I E DL
Sbjct: 5 TVCVTGANGFIGSWIIRTLIEKGYTKIHASIYPGS-DPT--HLLQLPGSDSKIKIFEADL 61
Query: 180 NDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQPS 239
D+ +++ D V H+A+ + + + V + G +N+LE K N +
Sbjct: 62 LDSDAISRAIDGC--AGVFHVASPCTLDPPVDPEKELVEPAVKGTINVLEAAKRFNVRRV 119
Query: 240 IVWASSSS-VYGLN--TQVPFSESHRTD-----QPASLYAATKKAGEEIAHTYNHIYGLA 291
++ +S S+ V N +VP ES +D Y +K E+ A ++ +G
Sbjct: 120 VITSSISALVPNPNWPEKVPVDESSWSDLDFCKSRQKWYPISKTLAEKAAWEFSEKHGTN 179
Query: 292 LTGLRFFTVYGPWGRPDM-AYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCV 350
+ + T GP +P++ A +LQG T +TQ+ + ++ DV KG V
Sbjct: 180 IVTIHPSTCLGPLLQPNLNASCAVLLQLLQGST----ETQEHHWLG--VVHVKDVAKGHV 233
Query: 351 GALDT 355
+T
Sbjct: 234 MLFET 238
>UNIPROTKB|P0AC88 [details] [associations]
symbol:gmd "GDP-mannose 4,6-dehydratase" species:83333
"Escherichia coli K-12" [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0019673 "GDP-mannose metabolic process"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA] [GO:0016829 "lyase activity" evidence=IEA]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=IEA]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=IEA]
[GO:0009242 "colanic acid biosynthetic process" evidence=IEA]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 UniPathway:UPA00980 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0005622 GO:GO:0009103 GO:GO:0019673 GO:GO:0042351 EMBL:U38473
GO:GO:0009242 eggNOG:COG1089 KO:K01711 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 PIR:D64971 RefSeq:NP_416557.1 RefSeq:YP_490295.1
PDB:1DB3 PDBsum:1DB3 ProteinModelPortal:P0AC88 SMR:P0AC88
DIP:DIP-48216N IntAct:P0AC88 EnsemblBacteria:EBESCT00000004343
EnsemblBacteria:EBESCT00000015616 GeneID:12930696 GeneID:946562
KEGG:ecj:Y75_p2016 KEGG:eco:b2053 PATRIC:32119439 EchoBASE:EB1735
EcoGene:EG11787 HOGENOM:HOG000168003 ProtClustDB:CLSK880276
BioCyc:EcoCyc:GDPMANDEHYDRA-MONOMER
BioCyc:ECOL316407:JW2038-MONOMER
BioCyc:MetaCyc:GDPMANDEHYDRA-MONOMER EvolutionaryTrace:P0AC88
Genevestigator:P0AC88 Uniprot:P0AC88
Length = 373
Score = 131 (51.2 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 51/182 (28%), Positives = 83/182 (45%)
Query: 122 LVTGAAGFVGSHCSLALKKRGDGVLGLDN-FNSYYDPSLKRARQKLLQKHQVFIVE-GDL 179
L+TG G GS+ + L ++G V G+ +S+ + Q + F + GDL
Sbjct: 6 LITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDL 65
Query: 180 NDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVAS-NIAGFVNLLEVCK--SVNP 236
+D LT++ V V +L A + V + ++P+ Y A + G + LLE + +
Sbjct: 66 SDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPE-YTADVDAMGTLRLLEAIRFLGLEK 124
Query: 237 QPSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGL-ALTGL 295
+ AS+S +YGL ++P E+ P S YA K I Y YG+ A G+
Sbjct: 125 KTRFYQASTSELYGLVQEIPQKET-TPFYPRSPYAVAKLYAYWITVNYRESYGMYACNGI 183
Query: 296 RF 297
F
Sbjct: 184 LF 185
>UNIPROTKB|B5XE59 [details] [associations]
symbol:GMDS "GDP-mannose 4,6 dehydratase" species:8030
"Salmo salar" [GO:0005575 "cellular_component" evidence=ND]
[GO:0007219 "Notch signaling pathway" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS] [GO:0019673
"GDP-mannose metabolic process" evidence=ISS] [GO:0042351 "'de
novo' GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0070401
"NADP+ binding" evidence=ISS] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0005622 GO:GO:0070401 GO:GO:0019673 GO:GO:0042351
GO:GO:0008446 TIGRFAMs:TIGR01472 HOVERGEN:HBG000727 CTD:2762
EMBL:BT049328 RefSeq:NP_001134845.1 UniGene:Ssa.6439
ProteinModelPortal:B5XE59 GeneID:100196344 Uniprot:B5XE59
Length = 370
Score = 130 (50.8 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 51/191 (26%), Positives = 91/191 (47%)
Query: 114 RRPNGMTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKH--- 170
++P + V +TG G GS+ + L ++G V G+ +S ++ + Q H
Sbjct: 18 KKPRKVAV-ITGITGQDGSYLAEFLLEKGYEVHGILRRSSSFNTGRIEHLYQNPQTHTEG 76
Query: 171 QVFIVEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVAS-NIAGFVNLLE 229
+ + GDL D+ L K+ + V T + +L AQ+ V+ + + + Y A+ + G + LL+
Sbjct: 77 NMKLHYGDLTDSTCLVKIINQVKPTEIYNLGAQSHVKISFELAE-YTANVDGVGTLRLLD 135
Query: 230 VCKSVNPQPSIVW--ASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHI 287
K+ S+ + AS+S +YG ++P E+ P S Y A K I +
Sbjct: 136 AIKTCGLTNSVKFYQASTSELYGKVQEIPQKET-TPFYPRSPYGAAKLYAYWIVVNFREA 194
Query: 288 YGL-ALTGLRF 297
Y L A+ G+ F
Sbjct: 195 YNLFAVNGILF 205
>UNIPROTKB|O60547 [details] [associations]
symbol:GMDS "GDP-mannose 4,6 dehydratase" species:9606
"Homo sapiens" [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IC]
[GO:0070401 "NADP+ binding" evidence=IDA] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=IGI;IDA] [GO:0019673
"GDP-mannose metabolic process" evidence=IGI;IDA] [GO:0007219
"Notch signaling pathway" evidence=ISS] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 GO:GO:0005737 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 EMBL:AL034344
eggNOG:COG1089 KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472
HOGENOM:HOG000168003 OMA:IAYNLTD HOVERGEN:HBG000727 EMBL:AF042377
EMBL:CR541929 EMBL:CR541947 EMBL:AL033517 EMBL:AL035693
EMBL:AL137179 EMBL:AL158139 EMBL:BC000117 EMBL:AF040260
IPI:IPI00030207 RefSeq:NP_001240775.1 RefSeq:NP_001491.1
UniGene:Hs.144496 UniGene:Hs.660919 PDB:1T2A PDBsum:1T2A
ProteinModelPortal:O60547 SMR:O60547 IntAct:O60547 STRING:O60547
PhosphoSite:O60547 PaxDb:O60547 PeptideAtlas:O60547 PRIDE:O60547
DNASU:2762 Ensembl:ENST00000380815 GeneID:2762 KEGG:hsa:2762
UCSC:uc003mtq.3 CTD:2762 GeneCards:GC06M001624 HGNC:HGNC:4369
HPA:HPA031528 MIM:602884 neXtProt:NX_O60547 PharmGKB:PA28754
InParanoid:O60547 OrthoDB:EOG4FXR7M PhylomeDB:O60547 ChiTaRS:GMDS
EvolutionaryTrace:O60547 GenomeRNAi:2762 NextBio:10866
ArrayExpress:O60547 Bgee:O60547 CleanEx:HS_GMDS
Genevestigator:O60547 GermOnline:ENSG00000112699 Uniprot:O60547
Length = 372
Score = 130 (50.8 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 52/190 (27%), Positives = 88/190 (46%)
Query: 115 RPNGMTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKH---Q 171
+P + L+TG G GS+ + L ++G V G+ +S ++ K Q H
Sbjct: 21 KPRNVA-LITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGN 79
Query: 172 VFIVEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVAS-NIAGFVNLLEV 230
+ + GDL D+ L K+ + V T + +L AQ+ V+ + + Y A + G + LL+
Sbjct: 80 MKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAE-YTADVDGVGTLRLLDA 138
Query: 231 CKSVNPQPSIVW--ASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIY 288
K+ S+ + AS+S +YG ++P E+ P S Y A K I + Y
Sbjct: 139 VKTCGLINSVKFYQASTSELYGKVQEIPQKET-TPFYPRSPYGAAKLYAYWIVVNFREAY 197
Query: 289 GL-ALTGLRF 297
L A+ G+ F
Sbjct: 198 NLFAVNGILF 207
>UNIPROTKB|F6W0W9 [details] [associations]
symbol:GMDS "GDP-mannose 4,6 dehydratase isoform 1"
species:9544 "Macaca mulatta" [GO:0005575 "cellular_component"
evidence=ND] [GO:0007219 "Notch signaling pathway" evidence=ISS]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=ISS]
[GO:0019673 "GDP-mannose metabolic process" evidence=ISS]
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISS] [GO:0070401 "NADP+ binding" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640 OMA:IAYNLTD
CTD:2762 EMBL:JU322217 EMBL:JV046790 RefSeq:NP_001253718.1
UniGene:Mmu.34300 Ensembl:ENSMMUT00000008111 GeneID:707051
KEGG:mcc:707051 NextBio:19971634 Uniprot:F6W0W9
Length = 372
Score = 130 (50.8 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 52/190 (27%), Positives = 88/190 (46%)
Query: 115 RPNGMTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKH---Q 171
+P + L+TG G GS+ + L ++G V G+ +S ++ K Q H
Sbjct: 21 KPRNVA-LITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGN 79
Query: 172 VFIVEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVAS-NIAGFVNLLEV 230
+ + GDL D+ L K+ + V T + +L AQ+ V+ + + Y A + G + LL+
Sbjct: 80 MKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAE-YTADVDGVGTLRLLDA 138
Query: 231 CKSVNPQPSIVW--ASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIY 288
K+ S+ + AS+S +YG ++P E+ P S Y A K I + Y
Sbjct: 139 VKTCGLINSVKFYQASTSELYGKVQEIPQKET-TPFYPRSPYGAAKLYAYWIVVNFREAY 197
Query: 289 GL-ALTGLRF 297
L A+ G+ F
Sbjct: 198 NLFAVNGILF 207
>UNIPROTKB|F7EWI9 [details] [associations]
symbol:GMDS "Uncharacterized protein" species:9483
"Callithrix jacchus" [GO:0005575 "cellular_component" evidence=ND]
[GO:0007219 "Notch signaling pathway" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS] [GO:0019673
"GDP-mannose metabolic process" evidence=ISS] [GO:0042351 "'de
novo' GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0070401
"NADP+ binding" evidence=ISS] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0005622 GO:GO:0070401 GO:GO:0019673 GO:GO:0042351
GO:GO:0008446 TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640
OMA:IAYNLTD CTD:2762 EMBL:ACFV01112271 EMBL:ACFV01112272
EMBL:ACFV01112273 EMBL:ACFV01112274 EMBL:ACFV01112275
EMBL:ACFV01112276 EMBL:ACFV01112277 EMBL:ACFV01112278
EMBL:ACFV01112279 EMBL:ACFV01112280 EMBL:ACFV01112281
EMBL:ACFV01112282 EMBL:ACFV01112283 EMBL:ACFV01112284
EMBL:ACFV01112285 EMBL:ACFV01112286 EMBL:ACFV01112287
EMBL:ACFV01112288 EMBL:ACFV01112289 EMBL:ACFV01112290
EMBL:ACFV01112291 EMBL:ACFV01112292 EMBL:ACFV01112293
EMBL:ACFV01112294 EMBL:ACFV01112295 EMBL:ACFV01112296
EMBL:ACFV01112297 EMBL:ACFV01112298 EMBL:ACFV01112299
EMBL:ACFV01112300 EMBL:ACFV01112301 RefSeq:XP_002746325.1
ProteinModelPortal:F7EWI9 Ensembl:ENSCJAT00000038466
GeneID:100390839 Uniprot:F7EWI9
Length = 372
Score = 130 (50.8 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 52/190 (27%), Positives = 88/190 (46%)
Query: 115 RPNGMTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKH---Q 171
+P + L+TG G GS+ + L ++G V G+ +S ++ K Q H
Sbjct: 21 KPRNVA-LITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGN 79
Query: 172 VFIVEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVAS-NIAGFVNLLEV 230
+ + GDL D+ L K+ + V T + +L AQ+ V+ + + Y A + G + LL+
Sbjct: 80 MKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAE-YTADVDGVGTLRLLDA 138
Query: 231 CKSVNPQPSIVW--ASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIY 288
K+ S+ + AS+S +YG ++P E+ P S Y A K I + Y
Sbjct: 139 VKTCGLINSVKFYQASTSELYGKVQEIPQKET-TPFYPRSPYGAAKLYAYWIVVNFREAY 197
Query: 289 GL-ALTGLRF 297
L A+ G+ F
Sbjct: 198 NLFAVNGILF 207
>UNIPROTKB|G4MZC9 [details] [associations]
symbol:MGG_11399 "Sterol-4-alpha-carboxylate
3-dehydrogenase" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR002225
Pfam:PF01073 InterPro:IPR016040 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0006696 EMBL:CM001232
KO:K07748 GO:GO:0000252 RefSeq:XP_003713491.1
ProteinModelPortal:G4MZC9 EnsemblFungi:MGG_11399T0 GeneID:5051352
KEGG:mgr:MGG_11399 Uniprot:G4MZC9
Length = 371
Score = 126 (49.4 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 63/236 (26%), Positives = 97/236 (41%)
Query: 120 TVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFN----SYYDPSLKRARQKLLQKHQVFIV 175
+VLV G GF+GSH L LD++ S D R R++ +Q H
Sbjct: 12 SVLVVGGCGFLGSHIVRML---------LDDYKCSAVSAVDLRCTRNRREGVQYH----- 57
Query: 176 EGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVN 235
+ D+ +A L +FD V V+H A+ ++ + + N+ G ++E CK
Sbjct: 58 DADITNAERLVSVFDEVRPDVVIHTASPLAQGNSVVHRDIFYKVNVEGTRTVVEACKKAG 117
Query: 236 PQPSIVWASSSSVYGLNTQVPFSESHRT-----DQPASLYAATKKAGEEIAHTYNHIYGL 290
+ ++V+ SS+SV N + R D+ Y+ TK EEI N L
Sbjct: 118 VK-ALVFTSSASVISDNVSDLINADERWPMIRGDKQTEYYSDTKAEAEEIVLKANEPGKL 176
Query: 291 ALTGLRFFTVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQ-DDREVARDFTYIDDV 345
+R ++G G M K +GK +K Q D DFTY +V
Sbjct: 177 LTAAIRPSGIFGE-G-DSMVTANLVKTYREGK----WKVQVGDNNNLFDFTYAGNV 226
Score = 45 (20.9 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 8/27 (29%), Positives = 16/27 (59%)
Query: 419 NVSLAYKDFGYKPTTDLAAGLRKFVKW 445
N++ A + GY P + G+R+ V++
Sbjct: 332 NITKAKQRLGYAPIVSMEEGVRRGVQY 358
>UNIPROTKB|F6Z8R0 [details] [associations]
symbol:GMDS "Uncharacterized protein" species:13616
"Monodelphis domestica" [GO:0005575 "cellular_component"
evidence=ND] [GO:0007219 "Notch signaling pathway" evidence=ISS]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=ISS]
[GO:0019673 "GDP-mannose metabolic process" evidence=ISS]
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISS] [GO:0070401 "NADP+ binding" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 GO:GO:0008446
TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640 OMA:IAYNLTD
Ensembl:ENSMODT00000010461 Uniprot:F6Z8R0
Length = 347
Score = 129 (50.5 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 51/183 (27%), Positives = 85/183 (46%)
Query: 122 LVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKH---QVFIVEGD 178
L+TG G GS+ + L ++G V G+ +S ++ K Q H + + GD
Sbjct: 27 LITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGD 86
Query: 179 LNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVAS-NIAGFVNLLEVCKSVNPQ 237
L D+ L K+ + V T + +L AQ+ V+ + + Y A + G + LL+ K+
Sbjct: 87 LTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAE-YTADVDGVGTLRLLDAIKTCGLI 145
Query: 238 PSIVW--ASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGL-ALTG 294
S+ + AS+S +YG ++P E+ P S Y A K I + Y L A+ G
Sbjct: 146 NSVKFYQASTSELYGKVQEIPQKET-TPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNG 204
Query: 295 LRF 297
+ F
Sbjct: 205 ILF 207
>UNIPROTKB|Q8K3X3 [details] [associations]
symbol:GMDS "GDP-mannose 4,6 dehydratase" species:10029
"Cricetulus griseus" [GO:0005575 "cellular_component" evidence=ND]
[GO:0007219 "Notch signaling pathway" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS] [GO:0019673
"GDP-mannose metabolic process" evidence=ISS] [GO:0042351 "'de
novo' GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0070401
"NADP+ binding" evidence=ISS] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040
Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622 GO:GO:0070401
GO:GO:0019673 GO:GO:0042351 GO:GO:0008446 TIGRFAMs:TIGR01472
EMBL:AF525364 RefSeq:NP_001233625.1 ProteinModelPortal:Q8K3X3
SMR:Q8K3X3 GeneID:100689436 CTD:33716 HOVERGEN:HBG000727
Uniprot:Q8K3X3
Length = 372
Score = 129 (50.5 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 51/183 (27%), Positives = 85/183 (46%)
Query: 122 LVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKH---QVFIVEGD 178
L+TG G GS+ + L ++G V G+ +S ++ K Q H + + GD
Sbjct: 27 LITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGD 86
Query: 179 LNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVAS-NIAGFVNLLEVCKSVNPQ 237
L D+ L K+ + V T + +L AQ+ V+ + + Y A + G + LL+ K+
Sbjct: 87 LTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAE-YTADVDGVGTLRLLDAIKTCGLI 145
Query: 238 PSIVW--ASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGL-ALTG 294
S+ + AS+S +YG ++P E+ P S Y A K I + Y L A+ G
Sbjct: 146 NSVKFYQASTSELYGKVQEIPQKET-TPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNG 204
Query: 295 LRF 297
+ F
Sbjct: 205 ILF 207
>MGI|MGI:1891112 [details] [associations]
symbol:Gmds "GDP-mannose 4, 6-dehydratase" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005622 "intracellular"
evidence=IEA] [GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=ISO] [GO:0016829 "lyase activity" evidence=IEA]
[GO:0019673 "GDP-mannose metabolic process" evidence=ISO]
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISO] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0070401 "NADP+ binding" evidence=ISO] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 MGI:MGI:1891112 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0005622 GO:GO:0070401 GO:GO:0019673 GO:GO:0042351
eggNOG:COG1089 KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472
HOGENOM:HOG000168003 GeneTree:ENSGT00440000033640 OMA:IAYNLTD
HOVERGEN:HBG000727 CTD:2762 OrthoDB:EOG4FXR7M EMBL:AL645643
EMBL:AL645664 EMBL:AL645697 EMBL:AL645783 EMBL:AL645763
EMBL:BC031788 EMBL:BC093502 IPI:IPI00169546 RefSeq:NP_666153.1
UniGene:Mm.247143 ProteinModelPortal:Q8K0C9 SMR:Q8K0C9
STRING:Q8K0C9 PhosphoSite:Q8K0C9 PaxDb:Q8K0C9 PRIDE:Q8K0C9
Ensembl:ENSMUST00000041859 GeneID:218138 KEGG:mmu:218138
UCSC:uc007pzq.1 InParanoid:Q8K0C9 NextBio:376160 Bgee:Q8K0C9
CleanEx:MM_GMDS Genevestigator:Q8K0C9 GermOnline:ENSMUSG00000038372
Uniprot:Q8K0C9
Length = 372
Score = 129 (50.5 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 51/183 (27%), Positives = 85/183 (46%)
Query: 122 LVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKH---QVFIVEGD 178
L+TG G GS+ + L ++G V G+ +S ++ K Q H + + GD
Sbjct: 27 LITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGD 86
Query: 179 LNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVAS-NIAGFVNLLEVCKSVNPQ 237
L D+ L K+ + V T + +L AQ+ V+ + + Y A + G + LL+ K+
Sbjct: 87 LTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAE-YTADVDGVGTLRLLDAIKTCGLI 145
Query: 238 PSIVW--ASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGL-ALTG 294
S+ + AS+S +YG ++P E+ P S Y A K I + Y L A+ G
Sbjct: 146 NSVKFYQASTSELYGKVQEIPQKET-TPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNG 204
Query: 295 LRF 297
+ F
Sbjct: 205 ILF 207
>RGD|1311008 [details] [associations]
symbol:Gmds "GDP-mannose 4, 6-dehydratase" species:10116 "Rattus
norvegicus" [GO:0005575 "cellular_component" evidence=ND]
[GO:0005622 "intracellular" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=ISS] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISO;ISS] [GO:0019673
"GDP-mannose metabolic process" evidence=ISO;ISS] [GO:0042351 "'de
novo' GDP-L-fucose biosynthetic process" evidence=ISO;ISS]
[GO:0070401 "NADP+ binding" evidence=ISO;ISS] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 InterPro:IPR016040 RGD:1311008
Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622 GO:GO:0070401
EMBL:CH473977 GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711
GO:GO:0008446 TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
GeneTree:ENSGT00440000033640 OMA:IAYNLTD HOVERGEN:HBG000727
CTD:2762 OrthoDB:EOG4FXR7M EMBL:BC104708 IPI:IPI00362967
RefSeq:NP_001034695.1 UniGene:Rn.212995 SMR:Q3MHS7 STRING:Q3MHS7
Ensembl:ENSRNOT00000023691 GeneID:291095 KEGG:rno:291095
UCSC:RGD:1311008 InParanoid:Q3MHS7 NextBio:632111
Genevestigator:Q3MHS7 Uniprot:Q3MHS7
Length = 372
Score = 129 (50.5 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 51/183 (27%), Positives = 85/183 (46%)
Query: 122 LVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKH---QVFIVEGD 178
L+TG G GS+ + L ++G V G+ +S ++ K Q H + + GD
Sbjct: 27 LITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGD 86
Query: 179 LNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVAS-NIAGFVNLLEVCKSVNPQ 237
L D+ L K+ + V T + +L AQ+ V+ + + Y A + G + LL+ K+
Sbjct: 87 LTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAE-YTADVDGVGTLRLLDAIKTCGLI 145
Query: 238 PSIVW--ASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGL-ALTG 294
S+ + AS+S +YG ++P E+ P S Y A K I + Y L A+ G
Sbjct: 146 NSVKFYQASTSELYGKVQEIPQKET-TPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNG 204
Query: 295 LRF 297
+ F
Sbjct: 205 ILF 207
>UNIPROTKB|E1C279 [details] [associations]
symbol:NSDHL "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0001942 "hair follicle development" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0005811
"lipid particle" evidence=IEA] [GO:0007224 "smoothened signaling
pathway" evidence=IEA] [GO:0008203 "cholesterol metabolic process"
evidence=IEA] [GO:0060716 "labyrinthine layer blood vessel
development" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 GO:GO:0005783 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006694 GeneTree:ENSGT00550000074557
OMA:IQLQPTF GO:GO:0005811 GO:GO:0008203 GO:GO:0007224 KO:K07748
CTD:50814 EMBL:AADN02013506 IPI:IPI00684598 RefSeq:XP_420279.1
ProteinModelPortal:E1C279 Ensembl:ENSGALT00000032336 GeneID:422302
KEGG:gga:422302 NextBio:20824951 Uniprot:E1C279
Length = 346
Score = 111 (44.1 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 58/245 (23%), Positives = 97/245 (39%)
Query: 164 QKLLQKHQVFIVEGDL-NDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIA 222
QK +V GDL N LL L DV + H A+ A + N + + N
Sbjct: 42 QKRFDHDRVQFFLGDLCNKEALLPALQDV---SVAFHCASPAP---SSDNKELFYKVNFM 95
Query: 223 GFVNLLEVCKSVNPQPSIVWASSSSVY-GLNTQVPFSESHRTDQPASLYAATKKAGE-EI 280
G ++E CK Q ++ +S+S V+ G + + + +P Y TK E E+
Sbjct: 96 GTKAVIEACKEAGVQKLVLTSSASVVFEGTDIKNGTEDLPYAKKPIDYYTETKILQEKEV 155
Query: 281 AHTYNHIYGLALTGLRFFTVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFT 340
+ T +R ++GP R + GK + D + + DFT
Sbjct: 156 LSANDPDNNFFTTAIRPHGIFGP--RDPQLVPILIQAAKSGKM--KFIIGDGKNLV-DFT 210
Query: 341 YIDDVVKGCVGALDTAXXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILENLLNTKA 400
Y+++VV G + A + P + +++ N P+P +S + LN A
Sbjct: 211 YVENVVHGHILAAE--------HLRKDSPVCGKAFHITNDEPIPFWAFMSRILTGLNYDA 262
Query: 401 KKHVI 405
K+ I
Sbjct: 263 PKYYI 267
Score = 52 (23.4 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 111 ATPRRPNGMTVLVTGAAGFVGSHCSLALKKRGDGV 145
AT R G +V G +GF+G H L +G V
Sbjct: 2 ATHFRSTGKKCVVIGGSGFLGQHMVEKLLDKGYSV 36
Score = 42 (19.8 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 423 AYKDFGYKPTTDLAAGLRKFVKWY 446
A +D GYKP L + + ++ Y
Sbjct: 315 AKRDMGYKPVVSLDEAIDRTLQSY 338
>ASPGD|ASPL0000035245 [details] [associations]
symbol:AN2951 species:162425 "Emericella nidulans"
[GO:0006012 "galactose metabolic process" evidence=RCA] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=RCA] [GO:0005575
"cellular_component" evidence=ND] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA]
InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:BN001306 EMBL:AACD01000051 GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
OMA:CEAILAD RefSeq:XP_660555.1 ProteinModelPortal:Q5B929
STRING:Q5B929 EnsemblFungi:CADANIAT00010133 GeneID:2873905
KEGG:ani:AN2951.2 OrthoDB:EOG4B8NNF Uniprot:Q5B929
Length = 428
Score = 95 (38.5 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 58/204 (28%), Positives = 85/204 (41%)
Query: 121 VLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGDLN 180
+LVTG GF+GSH +L L K V+ +DN ++ + R + L QKH E
Sbjct: 49 ILVTGGLGFIGSHTTLELLKASYNVVVIDNLSNSFQSVFDRIKH-LAQKHHD---ERGTE 104
Query: 181 DAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSV-NP--- 236
L D + L Q V P+S + S + F V +S+ NP
Sbjct: 105 MPALHLAAHDYRDTAALRQLLDQYQVDSRWGTPKSKI-SGVIHFAAYKAVEESIKNPLKY 163
Query: 237 -----QPSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAG----EEI-AHT--- 283
I +AS+ YG+ T + FS S A++Y +G EE+ AH
Sbjct: 164 YANNVSGLIDFASTLGKYGIKTFI-FSSS------ATVYGTLATSGLPLKEELCAHKDEI 216
Query: 284 YNHIYGLALTGLRFFT-VYGPWGR 306
Y+ G+A T T + P+GR
Sbjct: 217 YHDADGVAQTIRAGSTGITNPYGR 240
Score = 78 (32.5 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 32/122 (26%), Positives = 55/122 (45%)
Query: 327 YKTQDDREVARDFTYIDDVVKGCVGALDTAXXXXXXXXXXXXPAQLRVYNLGNTSPVPVG 386
++T+D V RDF ++ D+ +G + ALD A R +NLG V
Sbjct: 311 WETEDGTAV-RDFIHVTDLARGHIAALDAANERKLAE-------NFRAFNLGTGRGHSVK 362
Query: 387 RLVSILENLLNTKAKKHVIRMPRN-GDVPYTHANVSLAYKDFGYKPT---TDLAAGLRKF 442
+V +E++ ++ + V PR GDV A + + ++ +K TD L KF
Sbjct: 363 EVVDAMESV--SRKQIPVRAAPRRPGDVGSCVAVATRSQQELRWKTEKSLTDACGSLCKF 420
Query: 443 VK 444
++
Sbjct: 421 LE 422
>DICTYBASE|DDB_G0284553 [details] [associations]
symbol:gmd "GDP-mannose dehydratase" species:44689
"Dictyostelium discoideum" [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0019673 "GDP-mannose metabolic process"
evidence=IEA] [GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IEA;ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA;ISS] [GO:0016829 "lyase activity"
evidence=IEA] InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 dictyBase:DDB_G0284553
GenomeReviews:CM000153_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0005622 EMBL:AAFI02000066 GO:GO:0019673
GO:GO:0042351 eggNOG:COG1089 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 RefSeq:XP_001134543.1 ProteinModelPortal:Q1ZXF7
SMR:Q1ZXF7 STRING:Q1ZXF7 EnsemblProtists:DDB0231676 GeneID:8624624
KEGG:ddi:DDB_G0284553 ProtClustDB:CLSZ2432853 Uniprot:Q1ZXF7
Length = 356
Score = 127 (49.8 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 49/183 (26%), Positives = 83/183 (45%)
Query: 122 LVTGAAGFVGSHCSLALKKRGDGVLGL-DNFNSYYDPSLKRARQK---LLQKHQVFIVEG 177
L+TG G GS+ + L +G V G+ +++ +K K L +K + + G
Sbjct: 9 LITGITGQDGSYLTEFLISKGYYVHGIIQKIFHHFNTIVKNIYIKIDMLKEKESLTLHYG 68
Query: 178 DLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQ 237
DL DA L + V T + +L AQ+ V+ + + + G + LL+ +S +
Sbjct: 69 DLTDASNLHSIVSKVNPTEIYNLGAQSHVKVSFDMSEYTGDVDGLGCLRLLDAIRSCGME 128
Query: 238 PSIVW--ASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGL-ALTG 294
+ + AS+S +YG ++P SE+ P S YA K+ I Y Y + A G
Sbjct: 129 KKVKYYQASTSELYGKVQEIPQSET-TPFYPRSPYAVAKQYAYWIVVNYREAYDMYACNG 187
Query: 295 LRF 297
+ F
Sbjct: 188 ILF 190
>UNIPROTKB|P26439 [details] [associations]
symbol:HSD3B2 "3 beta-hydroxysteroid dehydrogenase/Delta
5-->4-isomerase type 2" species:9606 "Homo sapiens" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=NAS] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IDA] [GO:0006694 "steroid
biosynthetic process" evidence=IDA] [GO:0004769 "steroid
delta-isomerase activity" evidence=IDA] [GO:0030868 "smooth
endoplasmic reticulum membrane" evidence=ISS] [GO:0005743
"mitochondrial inner membrane" evidence=ISS] [GO:0005758
"mitochondrial intermembrane space" evidence=ISS] [GO:0031966
"mitochondrial membrane" evidence=NAS] [GO:0005783 "endoplasmic
reticulum" evidence=NAS] [GO:0005789 "endoplasmic reticulum
membrane" evidence=TAS] [GO:0006702 "androgen biosynthetic process"
evidence=TAS] [GO:0006704 "glucocorticoid biosynthetic process"
evidence=TAS] [GO:0006705 "mineralocorticoid biosynthetic process"
evidence=TAS] [GO:0008202 "steroid metabolic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
Reactome:REACT_111217 InterPro:IPR002225 Pfam:PF01073
UniPathway:UPA00062 InterPro:IPR016040 GO:GO:0016021 eggNOG:COG0451
HOVERGEN:HBG000014 KO:K00070 BRENDA:1.1.1.145 Reactome:REACT_15493
DrugBank:DB00157 DrugBank:DB01108 GO:GO:0005743 GO:GO:0005758
GO:GO:0030868 GO:GO:0003854 GO:GO:0000166 GO:GO:0004769
GO:GO:0006702 GO:GO:0006704 GO:GO:0006705 GO:GO:0044281
Gene3D:3.40.50.720 OMA:WVFPRIA EMBL:M77144 EMBL:M67466
EMBL:CR627415 EMBL:AK222997 EMBL:AL359553 EMBL:CH471122
EMBL:BC038419 EMBL:BC131488 EMBL:S80140 EMBL:S60309 EMBL:S60310
IPI:IPI00218494 IPI:IPI00465001 PIR:A39488 RefSeq:NP_000189.1
RefSeq:NP_001159592.1 UniGene:Hs.654399 ProteinModelPortal:P26439
SMR:P26439 STRING:P26439 PhosphoSite:P26439 DMDM:112770
PRIDE:P26439 DNASU:3284 Ensembl:ENST00000369416
Ensembl:ENST00000543831 GeneID:3284 KEGG:hsa:3284 UCSC:uc001ehs.3
UCSC:uc001ehu.3 CTD:3284 GeneCards:GC01P119957 HGNC:HGNC:5218
MIM:201810 MIM:613890 neXtProt:NX_P26439 Orphanet:90791
Orphanet:1331 Orphanet:3185 PharmGKB:PA29487 InParanoid:P26439
PhylomeDB:P26439 BioCyc:MetaCyc:HS10943-MONOMER BindingDB:P26439
ChEMBL:CHEMBL3670 GenomeRNAi:3284 NextBio:13035 ArrayExpress:P26439
Bgee:P26439 CleanEx:HS_HSD3B2 Genevestigator:P26439
GermOnline:ENSG00000203859 Uniprot:P26439
Length = 372
Score = 127 (49.8 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 51/198 (25%), Positives = 88/198 (44%)
Query: 118 GMTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEG 177
G + LVTGA G +G L + + + + + + P L+ KL + ++ ++EG
Sbjct: 2 GWSCLVTGAGGLLGQRIVRLLVEEKE-LKEIRALDKAFRPELREEFSKLQNRTKLTVLEG 60
Query: 178 DLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQ 237
D+ D P L + V V+H A V + + + +S + N+ G LLE C +
Sbjct: 61 DILDEPFLKRACQDVSV--VIHTACIIDV-FGVTHRESIMNVNVKGTQLLLEACVQASV- 116
Query: 238 PSIVWASSSSVYGLNTQVPFSESHRTDQPA-----SLYAATKKAGEEI---AHTYNHIYG 289
P ++ SS V G N+ ++ ++P + Y +KK E+ A+ +N G
Sbjct: 117 PVFIYTSSIEVAGPNSYKEIIQNGHEEEPLENTWPTPYPYSKKLAEKAVLAANGWNLKNG 176
Query: 290 --LALTGLRFFTVYGPWG 305
L LR +YG G
Sbjct: 177 DTLYTCALRPTYIYGEGG 194
Score = 41 (19.5 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 8/23 (34%), Positives = 11/23 (47%)
Query: 423 AYKDFGYKPTTDLAAGLRKFVKW 445
A +D YKP +K V+W
Sbjct: 333 AQRDLAYKPLYSWEEAKQKTVEW 355
>UNIPROTKB|P67910 [details] [associations]
symbol:rfaD "ADP-L-glycero-D-mannoheptose-6-epimerase"
species:83333 "Escherichia coli K-12" [GO:0097171
"ADP-L-glycero-beta-D-manno-heptose biosynthetic process"
evidence=IEA] [GO:0070401 "NADP+ binding" evidence=IDA] [GO:0016020
"membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006950 "response to stress" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0008712 "ADP-glyceromanno-heptose
6-epimerase activity" evidence=IEA;IDA] [GO:0009244
"lipopolysaccharide core region biosynthetic process"
evidence=IEA;IMP] UniPathway:UPA00356 HAMAP:MF_01601
InterPro:IPR001509 InterPro:IPR011912 Pfam:PF01370
UniPathway:UPA00958 InterPro:IPR016040 GO:GO:0005829 GO:GO:0006950
GO:GO:0016020 eggNOG:COG0451 Gene3D:3.40.50.720 EMBL:U00039
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0009244 GO:GO:0070401 GO:GO:0097171
EMBL:M33577 EMBL:X54492 PIR:JU0299 RefSeq:NP_418076.1
RefSeq:YP_491814.1 PDB:1EQ2 PDB:2X6T PDBsum:1EQ2 PDBsum:2X6T
ProteinModelPortal:P67910 SMR:P67910 DIP:DIP-35958N IntAct:P67910
SWISS-2DPAGE:P67910 PaxDb:P67910 PRIDE:P67910
EnsemblBacteria:EBESCT00000000716 EnsemblBacteria:EBESCT00000000717
EnsemblBacteria:EBESCT00000000718 EnsemblBacteria:EBESCT00000000719
EnsemblBacteria:EBESCT00000016472 GeneID:12934299 GeneID:948134
KEGG:ecj:Y75_p3555 KEGG:eco:b3619 PATRIC:32122725 EchoBASE:EB0831
EcoGene:EG10838 HOGENOM:HOG000167987 KO:K03274 OMA:AVNLWFW
ProtClustDB:PRK11150 BioCyc:EcoCyc:EG10838-MONOMER
BioCyc:ECOL316407:JW3594-MONOMER BioCyc:MetaCyc:EG10838-MONOMER
SABIO-RK:P67910 EvolutionaryTrace:P67910 Genevestigator:P67910
GO:GO:0008712 PANTHER:PTHR10366:SF29 TIGRFAMs:TIGR02197
Uniprot:P67910
Length = 310
Score = 124 (48.7 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 57/231 (24%), Positives = 101/231 (43%)
Query: 121 VLVTGAAGFVGSHCSLALKKRG-DGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGDL 179
++VTG AGF+GS+ AL +G +L +DN LK K + + I + +
Sbjct: 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDN--------LKDGT-KFVNLVDLNIADY-M 51
Query: 180 NDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVN-LLEVCKSVNPQP 238
+ L ++ F V + + + Y+ N + LL C + +
Sbjct: 52 DKEDFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYC--LEREI 109
Query: 239 SIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRFF 298
++ASS++ YG T F ES ++P ++Y +K +E + G R+F
Sbjct: 110 PFLYASSAATYGGRTS-DFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYF 168
Query: 299 TVYGPW-G-RPDMAY--FFFTKDILQGKTIDVYKTQDDREVARDFTYIDDV 345
VYGP G + MA F + G++ +++ ++ + RDF Y+ DV
Sbjct: 169 NVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFK--RDFVYVGDV 217
>UNIPROTKB|Q8AVI1 [details] [associations]
symbol:gmds "Gmds-prov protein" species:8355 "Xenopus
laevis" [GO:0005575 "cellular_component" evidence=ND] [GO:0007219
"Notch signaling pathway" evidence=ISS] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0019673 "GDP-mannose
metabolic process" evidence=ISS] [GO:0042351 "'de novo'
GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0070401 "NADP+
binding" evidence=ISS] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0005622 GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 KO:K01711
GO:GO:0008446 TIGRFAMs:TIGR01472 HOVERGEN:HBG000727 CTD:2762
HSSP:P32054 EMBL:BC042270 EMBL:BC111472 RefSeq:NP_001080352.1
UniGene:Xl.10260 SMR:Q8AVI1 GeneID:380044 KEGG:xla:380044
Xenbase:XB-GENE-943021 Uniprot:Q8AVI1
Length = 369
Score = 124 (48.7 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 53/204 (25%), Positives = 91/204 (44%)
Query: 104 EKQVRHSATPRRPNGM---TVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLK 160
+ Q S +P +G L+TG G GS+ + L ++G V G+ +S ++
Sbjct: 3 QNQGNCSCSPSNSSGKPRKVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRI 62
Query: 161 RARQKLLQKH---QVFIVEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYV 217
K H + + GDL D+ L K+ + V T + +L AQ+ V+ + + Y
Sbjct: 63 EHLYKNPHAHTEGNMKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAE-YT 121
Query: 218 AS-NIAGFVNLLEVCKSVNPQPSIVW--ASSSSVYGLNTQVPFSESHRTDQPASLYAATK 274
A + G + LL+ K+ ++ + AS+S +YG ++P E+ P S Y A K
Sbjct: 122 ADVDGLGTLRLLDATKTCGLINTVKFYQASTSELYGKVQEIPQKET-TPFYPRSPYGAAK 180
Query: 275 KAGEEIAHTYNHIYGL-ALTGLRF 297
I + Y L A+ G+ F
Sbjct: 181 LYAYWIVVNFREAYNLFAVNGILF 204
>UNIPROTKB|Q6P621 [details] [associations]
symbol:gmds "GDP-mannose 4,6-dehydratase" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005575 "cellular_component"
evidence=ND] [GO:0007219 "Notch signaling pathway" evidence=ISS]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=ISS]
[GO:0019673 "GDP-mannose metabolic process" evidence=ISS]
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISS] [GO:0070401 "NADP+ binding" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
GeneTree:ENSGT00440000033640 OMA:IAYNLTD HOVERGEN:HBG000727
OrthoDB:EOG4FXR7M EMBL:AAMC01033108 EMBL:AAMC01033109
EMBL:AAMC01033110 EMBL:AAMC01033111 EMBL:AAMC01033112
EMBL:AAMC01033113 EMBL:AAMC01033114 EMBL:AAMC01033115
EMBL:AAMC01033116 EMBL:AAMC01033117 EMBL:AAMC01033118
EMBL:AAMC01033119 EMBL:AAMC01033120 EMBL:AAMC01033121
EMBL:AAMC01033122 EMBL:AAMC01033123 EMBL:AAMC01033124
EMBL:AAMC01033125 EMBL:AAMC01033126 EMBL:AAMC01033127
EMBL:AAMC01033128 EMBL:AAMC01033129 EMBL:AAMC01033130
EMBL:AAMC01033131 EMBL:AAMC01033132 EMBL:BC062513 UniGene:Str.7169
ProteinModelPortal:Q6P621 STRING:Q6P621 Ensembl:ENSXETT00000001321
Xenbase:XB-GENE-943015 InParanoid:Q6P621 Bgee:Q6P621 Uniprot:Q6P621
Length = 383
Score = 124 (48.7 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 54/204 (26%), Positives = 91/204 (44%)
Query: 104 EKQVRHSATPRRPNGMT---VLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLK 160
+ Q S +P G + L+TG G GS+ + L ++G V G+ +S ++
Sbjct: 17 DNQGNCSGSPSNGAGKSRKVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRI 76
Query: 161 RARQKLLQKH---QVFIVEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYV 217
K H + + GDL D+ L K+ + V T + +L AQ+ V+ + + Y
Sbjct: 77 EHLYKNPHAHIEGNMKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAE-YT 135
Query: 218 AS-NIAGFVNLLEVCKSVNPQPSIVW--ASSSSVYGLNTQVPFSESHRTDQPASLYAATK 274
A + G + LL+ K+ S+ + AS+S +YG ++P E+ P S Y A K
Sbjct: 136 ADVDGLGTLRLLDATKTCGLINSVKFYQASTSELYGKVQEIPQKET-TPFYPRSPYGAAK 194
Query: 275 KAGEEIAHTYNHIYGL-ALTGLRF 297
I + Y L A+ G+ F
Sbjct: 195 LYAYWIVVNFREAYNLFAVNGILF 218
>ZFIN|ZDB-GENE-050419-45 [details] [associations]
symbol:gmds "GDP-mannose 4,6-dehydratase"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0019673 "GDP-mannose metabolic
process" evidence=IEA;ISS] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IEA;ISS] [GO:0008417 "fucosyltransferase activity"
evidence=IMP] [GO:0007219 "Notch signaling pathway" evidence=IMP]
[GO:0010842 "retina layer formation" evidence=IMP] [GO:0036065
"fucosylation" evidence=IMP] [GO:0021744 "dorsal motor nucleus of
vagus nerve development" evidence=IMP] [GO:0021564 "vagus nerve
development" evidence=IMP] [GO:0042351 "'de novo' GDP-L-fucose
biosynthetic process" evidence=ISS] [GO:0070401 "NADP+ binding"
evidence=ISS] InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 ZFIN:ZDB-GENE-050419-45 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0007219 GO:GO:0005622
GO:GO:0010842 GO:GO:0019673 GO:GO:0008417 EMBL:BX510653 KO:K01711
OMA:INPKYFR GO:GO:0008446 TIGRFAMs:TIGR01472
GeneTree:ENSGT00440000033640 CTD:2762 GO:GO:0021744 GO:GO:0021564
EMBL:BX678772 IPI:IPI00650926 RefSeq:NP_956783.3 UniGene:Dr.26662
Ensembl:ENSDART00000103234 GeneID:393461 KEGG:dre:393461
ArrayExpress:F1QPT3 Bgee:F1QPT3 Uniprot:F1QPT3
Length = 377
Score = 123 (48.4 bits), Expect = 9.3e-05, Sum P(2) = 9.3e-05
Identities = 50/190 (26%), Positives = 86/190 (45%)
Query: 122 LVTGAAGFVGSHCSLALKKRGDGVLGL----DNFNS------YYDPSLKRARQKLLQKHQ 171
++TG G GS+ + L +G V G+ +FN+ Y++P K
Sbjct: 25 IITGITGQDGSYLAELLLAKGYEVHGILRRSSSFNTGRIEHLYHNPQTHTEGSIGATKDH 84
Query: 172 VFIVEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVAS-NIAGFVNLLEV 230
+ + GDL D+ L K+ + V T + +L AQ+ V+ + + Y A + G + LL+
Sbjct: 85 MKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAE-YTADVDGVGTLRLLDA 143
Query: 231 CKSVNPQPSIVW--ASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIY 288
K+ ++ + AS+S +YG ++P E+ P S Y A K I + Y
Sbjct: 144 VKTCGLTDTVRFYQASTSELYGKVQEIPQKET-TPFYPRSPYGAAKLYAYWIVINFREAY 202
Query: 289 GL-ALTGLRF 297
L A+ G+ F
Sbjct: 203 NLFAVNGILF 212
Score = 42 (19.8 bits), Expect = 9.3e-05, Sum P(2) = 9.3e-05
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 409 RNGDVPYTHANVSLAYKDFGYKP 431
R +V Y + S A+K G+KP
Sbjct: 330 RPTEVDYLQGDSSKAFKVLGWKP 352
>UNIPROTKB|Q81V79 [details] [associations]
symbol:BA_0621 "Uncharacterized protein" species:1392
"Bacillus anthracis" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:AE016879 EMBL:AE017334 GenomeReviews:AE016879_GR
GenomeReviews:AE017334_GR GO:GO:0044237 HOGENOM:HOG000034276
OMA:DYAVEIF RefSeq:NP_843152.1 RefSeq:YP_017248.1
ProteinModelPortal:Q81V79 SMR:Q81V79 DNASU:1087994
EnsemblBacteria:EBBACT00000011110 EnsemblBacteria:EBBACT00000017957
GeneID:1087994 GeneID:2814938 KEGG:ban:BA_0621 KEGG:bar:GBAA_0621
PATRIC:18778842 ProtClustDB:CLSK865117
BioCyc:BANT261594:GJ7F-674-MONOMER Uniprot:Q81V79
Length = 317
Score = 123 (48.4 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 58/242 (23%), Positives = 99/242 (40%)
Query: 121 VLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGDLN 180
+LVTG+ G +GS L +K R V G N + ++ +++ + D+
Sbjct: 4 ILVTGSLGQIGSE--LVMKLRD--VYGASNVIA---TDIRETDSEVVTSGPFETL--DVT 54
Query: 181 DAPLLTKLFDVVPFTHV---LHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQ 237
D KL D+ V +HLAA A +NP N+ G VN LE + +N +
Sbjct: 55 DGQ---KLHDIAKRNEVDTIIHLAALLSAT-AEKNPLFAWNLNMGGLVNALEAARELNCK 110
Query: 238 PSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRF 297
SS +G +T + +P ++Y K AGE + Y+ +G+ G+RF
Sbjct: 111 --FFTPSSIGAFGPSTPKDNTPQDTIQRPTTMYGVNKVAGELLCDYYHQKFGVDTRGVRF 168
Query: 298 ---FTVYGP--WGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGA 352
+ P G D A + + I +G Y + D Y+ D ++ +
Sbjct: 169 PGLISYVAPPGGGTTDYAVEIYYEAIKKG----TYTSYIAEGTYMDMMYMPDALQAIISL 224
Query: 353 LD 354
++
Sbjct: 225 ME 226
Score = 38 (18.4 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 7/26 (26%), Positives = 14/26 (53%)
Query: 429 YKPTTDLAAGLRKFVKWYVSYYGIQP 454
++P +AA +RK + + Y + P
Sbjct: 245 FEPE-QIAASIRKHIPTFTMDYAVDP 269
>TIGR_CMR|BA_0621 [details] [associations]
symbol:BA_0621 "conserved hypothetical protein"
species:198094 "Bacillus anthracis str. Ames" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016879
EMBL:AE017334 GenomeReviews:AE016879_GR GenomeReviews:AE017334_GR
GO:GO:0044237 HOGENOM:HOG000034276 OMA:DYAVEIF RefSeq:NP_843152.1
RefSeq:YP_017248.1 ProteinModelPortal:Q81V79 SMR:Q81V79
DNASU:1087994 EnsemblBacteria:EBBACT00000011110
EnsemblBacteria:EBBACT00000017957 GeneID:1087994 GeneID:2814938
KEGG:ban:BA_0621 KEGG:bar:GBAA_0621 PATRIC:18778842
ProtClustDB:CLSK865117 BioCyc:BANT261594:GJ7F-674-MONOMER
Uniprot:Q81V79
Length = 317
Score = 123 (48.4 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 58/242 (23%), Positives = 99/242 (40%)
Query: 121 VLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGDLN 180
+LVTG+ G +GS L +K R V G N + ++ +++ + D+
Sbjct: 4 ILVTGSLGQIGSE--LVMKLRD--VYGASNVIA---TDIRETDSEVVTSGPFETL--DVT 54
Query: 181 DAPLLTKLFDVVPFTHV---LHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQ 237
D KL D+ V +HLAA A +NP N+ G VN LE + +N +
Sbjct: 55 DGQ---KLHDIAKRNEVDTIIHLAALLSAT-AEKNPLFAWNLNMGGLVNALEAARELNCK 110
Query: 238 PSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRF 297
SS +G +T + +P ++Y K AGE + Y+ +G+ G+RF
Sbjct: 111 --FFTPSSIGAFGPSTPKDNTPQDTIQRPTTMYGVNKVAGELLCDYYHQKFGVDTRGVRF 168
Query: 298 ---FTVYGP--WGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGA 352
+ P G D A + + I +G Y + D Y+ D ++ +
Sbjct: 169 PGLISYVAPPGGGTTDYAVEIYYEAIKKG----TYTSYIAEGTYMDMMYMPDALQAIISL 224
Query: 353 LD 354
++
Sbjct: 225 ME 226
Score = 38 (18.4 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 7/26 (26%), Positives = 14/26 (53%)
Query: 429 YKPTTDLAAGLRKFVKWYVSYYGIQP 454
++P +AA +RK + + Y + P
Sbjct: 245 FEPE-QIAASIRKHIPTFTMDYAVDP 269
>DICTYBASE|DDB_G0270184 [details] [associations]
symbol:ger "GDP-keto-6-deoxymannose 3,5-
epimerase/4-reductase" species:44689 "Dictyostelium discoideum"
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0050577 "GDP-L-fucose synthase activity" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0016853
"isomerase activity" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA] InterPro:IPR001509 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 dictyBase:DDB_G0270184
EMBL:AAFI02000005 GenomeReviews:CM000150_GR eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0016853
KO:K02377 GO:GO:0050577 GO:GO:0042351 OMA:IHCAGRV
RefSeq:XP_646604.1 HSSP:P32055 ProteinModelPortal:Q55C77
STRING:Q55C77 EnsemblProtists:DDB0305155 GeneID:8617576
KEGG:ddi:DDB_G0270184 InParanoid:Q55C77 ProtClustDB:CLSZ2431446
Uniprot:Q55C77
Length = 320
Score = 116 (45.9 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 62/286 (21%), Positives = 105/286 (36%)
Query: 178 DLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYA-MQNPQSYVASNIAGFVNLLEVCKSVNP 236
DL F+ + THV+HLAA+ G ++ M+ + NI N+L CK N
Sbjct: 46 DLKSRESTRSYFEKIKPTHVIHLAARVGGLFSNMKYKVEFFRENIDINDNVLACCKEFNV 105
Query: 237 QPSIVWASSSSVYGLNTQVPFSES--HR-TDQPASL-YAATKKAGEEIAHTYNHIYGLAL 292
V S+ ++ T P E+ H P++ YA K+ + + YN YG
Sbjct: 106 V-KCVSCLSTCIFPDKTTYPIDETMIHNGPPHPSNEGYAYAKRMIDVLNRAYNEEYGCKF 164
Query: 293 TGLRFFTVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVA------RDFTYIDDVV 346
T + +YGP + ++ KT K D + R F Y D+
Sbjct: 165 TSVIPTNIYGPHDNYHLTDGHVIPGLIH-KTYLAMKNNQDLTIMGTGKPLRQFIYSYDLA 223
Query: 347 KGCVGALDTAXXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAKKHVIR 406
K V L+ P L V G + + + ++ + K K
Sbjct: 224 KYFVWTLNN--------YEEMSPLILSV---GEEDEISIADVARLITEAMEFKGKLIFDT 272
Query: 407 MPRNGDVPYTHANVSLA--YKDFGYKPTTDLAAGLRKFVKWYVSYY 450
+G T +N+ L D + P + +++ +W++ Y
Sbjct: 273 SKADGQYKKTASNLKLKSLVPDLTFTP---IQQAIKESCQWFIDNY 315
Score = 45 (20.9 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 9/12 (75%), Positives = 10/12 (83%)
Query: 120 TVLVTGAAGFVG 131
TVLVTG +G VG
Sbjct: 9 TVLVTGGSGLVG 20
>DICTYBASE|DDB_G0281487 [details] [associations]
symbol:DDB_G0281487 "3-beta-hydroxysteroid
dehydrogenase" species:44689 "Dictyostelium discoideum" [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0016616
"oxidoreductase activity, acting on the CH-OH group of donors, NAD
or NADP as acceptor" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 dictyBase:DDB_G0281487 eggNOG:COG0451
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
EMBL:AAFI02000041 KO:K07748 RefSeq:XP_640712.1
ProteinModelPortal:Q54TU9 STRING:Q54TU9 PRIDE:Q54TU9
EnsemblProtists:DDB0233059 GeneID:8623099 KEGG:ddi:DDB_G0281487
InParanoid:Q54TU9 OMA:HIVWGPG ProtClustDB:CLSZ2729041
Uniprot:Q54TU9
Length = 349
Score = 95 (38.5 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 50/192 (26%), Positives = 76/192 (39%)
Query: 195 THVLHLAAQA-GVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQPSIVWASSSSVYGLNT 253
T V H A+ G+ Y + Y + N+ G L+E C + + +SSS V+
Sbjct: 65 TTVFHTASPTHGMGYDI-----YYSVNVIGTERLIEACIKCGVKQLVYTSSSSVVFNGKD 119
Query: 254 QVPFSES-HRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRFFTVYGPWGRPDMAYF 312
V E+ D+ Y TK+ GE L + LR ++GP R +
Sbjct: 120 IVNGDETLPYVDKHIDPYNKTKELGERAVLKAKGS-NLLVCALRPAGIFGP--REVQGWP 176
Query: 313 FFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGALDTAXXXXXXXXXXXXPAQL 372
F K +GK + + D + D+TYID+VV + A D P
Sbjct: 177 QFLKAAKEGK--NKFMFGDGNNLC-DWTYIDNVVHAHILAADNMTTNS--------PISG 225
Query: 373 RVYNLGNTSPVP 384
VY + N P+P
Sbjct: 226 SVYFITNDEPIP 237
Score = 62 (26.9 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 18/65 (27%), Positives = 33/65 (50%)
Query: 388 LVSILENLLNTKAKKH-VIRMPRNGDVPYTHA----NVSLAYKDFGYKPTTDLAAGLRKF 442
++ ++ LL+ K H I + R + YT++ N+ A K+ YKP L G+ K
Sbjct: 269 MIDLITLLLSPFVKLHPTISLFR---IIYTNSTRYFNIEKAKKELKYKPIVSLRDGMEKT 325
Query: 443 VKWYV 447
+W++
Sbjct: 326 KEWFL 330
Score = 43 (20.2 bits), Expect = 0.00017, Sum P(3) = 0.00017
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 122 LVTGAAGFVGSHCSLALKKRGD 143
LV G GF+G + +L RG+
Sbjct: 6 LVVGGCGFLGRYIVESLLARGE 27
>UNIPROTKB|F1P299 [details] [associations]
symbol:GMDS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0007219 "Notch signaling
pathway" evidence=ISS] [GO:0042351 "'de novo' GDP-L-fucose
biosynthetic process" evidence=ISS] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0019673 "GDP-mannose
metabolic process" evidence=ISS] [GO:0070401 "NADP+ binding"
evidence=ISS] InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 GO:GO:0008446
TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640 OMA:IAYNLTD
EMBL:AADN02036511 EMBL:AADN02036512 EMBL:AADN02036513
EMBL:AADN02036514 EMBL:AADN02036515 EMBL:AADN02036516
EMBL:AADN02036517 EMBL:AADN02036518 IPI:IPI00578850
Ensembl:ENSGALT00000020945 Uniprot:F1P299
Length = 358
Score = 121 (47.7 bits), Expect = 0.00018, P = 0.00018
Identities = 49/183 (26%), Positives = 84/183 (45%)
Query: 122 LVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKH---QVFIVEGD 178
L+TG G GS+ + L ++G V G+ +S ++ K Q H + + GD
Sbjct: 13 LITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNSQAHIEGNMKLHYGD 72
Query: 179 LNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVAS-NIAGFVNLLEVCKSVNPQ 237
L D+ L K+ + V + +L AQ+ V+ + + Y A + G + LL+ K+
Sbjct: 73 LTDSTCLVKIINEVKPNEIYNLGAQSHVKISFDLAE-YTADVDGVGTLRLLDAIKTCGLI 131
Query: 238 PSIVW--ASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGL-ALTG 294
S+ + AS+S ++G ++P E+ P S Y A K I + Y L A+ G
Sbjct: 132 NSVKFYQASTSELFGKVQEIPQKET-TPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNG 190
Query: 295 LRF 297
+ F
Sbjct: 191 ILF 193
>GENEDB_PFALCIPARUM|PF10_0137 [details] [associations]
symbol:PF10_0137 "GDP-fucose synthase,
putative" species:5833 "Plasmodium falciparum" [GO:0016491
"oxidoreductase activity" evidence=ISS] [GO:0016857 "racemase and
epimerase activity, acting on carbohydrates and derivatives"
evidence=ISS] [GO:0006486 "protein glycosylation" evidence=ISS]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009225 GO:GO:0016491 GO:GO:0006486
EMBL:AE014185 HOGENOM:HOG000168011 KO:K02377
ProtClustDB:CLSZ2431446 GO:GO:0016857 RefSeq:XP_001347422.1
ProteinModelPortal:Q8IJQ5 GeneID:810295 KEGG:pfa:PF10_0137
EuPathDB:PlasmoDB:PF3D7_1014000 OMA:IRETCEW Uniprot:Q8IJQ5
Length = 329
Score = 120 (47.3 bits), Expect = 0.00020, P = 0.00020
Identities = 53/239 (22%), Positives = 99/239 (41%)
Query: 122 LVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEG--DL 179
LVTG G +GS +K ++ + N S + ++ K+ +F+ DL
Sbjct: 6 LVTGGTGLLGSSLREVIKNENKNII--EKENEIIVNS--NENKNIITKY-IFLSSEMCDL 60
Query: 180 NDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQ-SYVASNIAGFVNLLEVCKSVNPQP 238
D +F+ FT ++H AA G YA +N ++ +N+ +N++++C +
Sbjct: 61 KDYDKSKLVFEKYNFTDIIHFAAHVGGLYANKNNNLDFLINNLEISMNVIKLCHKYSISR 120
Query: 239 SIVWASSSSVYGLNTQVPFSES--H--RTDQPASLYAATKKAGEEIAHTYNHIYGLALTG 294
I + S+ ++ +N +P +E H + Q Y+ +K+ E + Y Y
Sbjct: 121 GI-FTLSTCIFPVNCSLPLTEEKIHDGKCHQSNEGYSVSKRVLEVLVRFYREKYNYEWIC 179
Query: 295 LRFFTVYGPWGRPDMAYFFFTKDILQGKTI------DVYKTQDDREVARDFTYIDDVVK 347
+ +YG + ++ I+ + +VY D V R F Y DV K
Sbjct: 180 IIPTNIYGKYDNFNLENAHVIPSIIHKMYLAKVNNTNVYLLGDGSAV-RQFIYNIDVNK 237
>UNIPROTKB|Q8IJQ5 [details] [associations]
symbol:PF10_0137 "GDP-fucose synthase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0005575
"cellular_component" evidence=ND] [GO:0006486 "protein
glycosylation" evidence=ISS] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=ISS] [GO:0016491 "oxidoreductase
activity" evidence=ISS] [GO:0016857 "racemase and epimerase
activity, acting on carbohydrates and derivatives" evidence=ISS]
[GO:0055114 "oxidation-reduction process" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225 GO:GO:0016491
GO:GO:0006486 EMBL:AE014185 HOGENOM:HOG000168011 KO:K02377
ProtClustDB:CLSZ2431446 GO:GO:0016857 RefSeq:XP_001347422.1
ProteinModelPortal:Q8IJQ5 GeneID:810295 KEGG:pfa:PF10_0137
EuPathDB:PlasmoDB:PF3D7_1014000 OMA:IRETCEW Uniprot:Q8IJQ5
Length = 329
Score = 120 (47.3 bits), Expect = 0.00020, P = 0.00020
Identities = 53/239 (22%), Positives = 99/239 (41%)
Query: 122 LVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEG--DL 179
LVTG G +GS +K ++ + N S + ++ K+ +F+ DL
Sbjct: 6 LVTGGTGLLGSSLREVIKNENKNII--EKENEIIVNS--NENKNIITKY-IFLSSEMCDL 60
Query: 180 NDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQ-SYVASNIAGFVNLLEVCKSVNPQP 238
D +F+ FT ++H AA G YA +N ++ +N+ +N++++C +
Sbjct: 61 KDYDKSKLVFEKYNFTDIIHFAAHVGGLYANKNNNLDFLINNLEISMNVIKLCHKYSISR 120
Query: 239 SIVWASSSSVYGLNTQVPFSES--H--RTDQPASLYAATKKAGEEIAHTYNHIYGLALTG 294
I + S+ ++ +N +P +E H + Q Y+ +K+ E + Y Y
Sbjct: 121 GI-FTLSTCIFPVNCSLPLTEEKIHDGKCHQSNEGYSVSKRVLEVLVRFYREKYNYEWIC 179
Query: 295 LRFFTVYGPWGRPDMAYFFFTKDILQGKTI------DVYKTQDDREVARDFTYIDDVVK 347
+ +YG + ++ I+ + +VY D V R F Y DV K
Sbjct: 180 IIPTNIYGKYDNFNLENAHVIPSIIHKMYLAKVNNTNVYLLGDGSAV-RQFIYNIDVNK 237
>UNIPROTKB|C9JCB7 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005739 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 EMBL:AC018878 HOGENOM:HOG000168004
HGNC:HGNC:17729 IPI:IPI00916638 ProteinModelPortal:C9JCB7
SMR:C9JCB7 STRING:C9JCB7 PRIDE:C9JCB7 Ensembl:ENST00000416298
ArrayExpress:C9JCB7 Bgee:C9JCB7 Uniprot:C9JCB7
Length = 134
Score = 99 (39.9 bits), Expect = 0.00022, P = 0.00022
Identities = 37/139 (26%), Positives = 59/139 (42%)
Query: 210 MQNPQSYVASNIAGFVNLLEVCKSVNPQPSIVWASSSSVYGLNTQVPFSESH----RTDQ 265
M NP + +N G +N+L + K V + ++ AS+S VYG P SE +
Sbjct: 1 MYNPIKTLKTNTIGTLNMLGLAKRVGAR--LLLASTSEVYGDPEVHPQSEDYWGHVNPIG 58
Query: 266 PASLYAATKKAGEEIAHTYNHIYGLALTGLRFFTVYGPWGRPDMAYFF--FTKDILQGKT 323
P + Y K+ E + + Y G+ + R F +GP + F LQG+
Sbjct: 59 PRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEP 118
Query: 324 IDVYKTQDDREVARDFTYI 342
+ VY + R F Y+
Sbjct: 119 LTVYGSGSQ---TRAFQYV 134
>MGI|MGI:109598 [details] [associations]
symbol:Hsd3b6 "hydroxy-delta-5-steroid dehydrogenase, 3 beta-
and steroid delta-isomerase 6" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=ISO] [GO:0004769 "steroid delta-isomerase activity"
evidence=ISO] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=ISO] [GO:0005758
"mitochondrial intermembrane space" evidence=ISO] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0006700 "C21-steroid
hormone biosynthetic process" evidence=ISO] [GO:0006702 "androgen
biosynthetic process" evidence=ISO] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0016616 "oxidoreductase activity,
acting on the CH-OH group of donors, NAD or NADP as acceptor"
evidence=IEA] [GO:0016853 "isomerase activity" evidence=IEA]
[GO:0034757 "negative regulation of iron ion transport"
evidence=ISO] [GO:0055114 "oxidation-reduction process"
evidence=ISO] InterPro:IPR002225 Pfam:PF01073 UniPathway:UPA00062
InterPro:IPR016040 MGI:MGI:109598 GO:GO:0016021
HOGENOM:HOG000167989 HOVERGEN:HBG000014 KO:K00070 OrthoDB:EOG4K3KWG
BRENDA:1.1.1.145 GO:GO:0003854 GO:GO:0000166 GO:GO:0004769
Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0031966 GO:GO:0006694
BRENDA:5.3.3.1 EMBL:AL606755 GeneTree:ENSGT00550000074557 CTD:15497
EMBL:AF031170 EMBL:AK142267 EMBL:CH466620 IPI:IPI00420666
RefSeq:NP_038849.2 UniGene:Mm.14435 ProteinModelPortal:O35469
SMR:O35469 STRING:O35469 PRIDE:O35469 Ensembl:ENSMUST00000029463
Ensembl:ENSMUST00000170847 GeneID:15497 KEGG:mmu:15497
InParanoid:Q3UQN7 OMA:FIHISST NextBio:288386 Bgee:O35469
Genevestigator:O35469 GermOnline:ENSMUSG00000027869 Uniprot:O35469
Length = 373
Score = 122 (48.0 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 53/195 (27%), Positives = 82/195 (42%)
Query: 118 GMTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEG 177
G + LVTGA GF+G L + D + + + ++ P + L +V ++EG
Sbjct: 3 GWSCLVTGAGGFLGQRIVQLLMQEKD-LEEIRVLDKFFRPETREQFFNLDTNIKVTVLEG 61
Query: 178 DLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQ 237
D+ D L K + V+H AA V + Q+ + N+ G NLLE C +
Sbjct: 62 DILDTQYLRKACQGISV--VIHTAAVIDVTGVIPR-QTILDVNLKGTQNLLEACIQASV- 117
Query: 238 PSIVWASSSSVYGLNTQVPF-----SESHRTDQPASLYAATKKAGEEIAHTYN----HIY 288
P+ +++SS V G N+ E H + Y +KK E+ N I
Sbjct: 118 PAFIFSSSVDVAGPNSYKEIILNGNEEEHHESIWSDPYPYSKKMAEKAVLAANGSMLKIG 177
Query: 289 GLALT-GLRFFTVYG 302
G T LR +YG
Sbjct: 178 GTLHTCALRPMYIYG 192
Score = 39 (18.8 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 7/23 (30%), Positives = 11/23 (47%)
Query: 423 AYKDFGYKPTTDLAAGLRKFVKW 445
A +D GY+P +K +W
Sbjct: 334 AQRDLGYEPLVSWEEAKQKTSEW 356
>UNIPROTKB|Q4K8G6 [details] [associations]
symbol:PFL_4375 "NAD dependent epimerase/dehydratase family
protein" species:220664 "Pseudomonas protegens Pf-5" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0044237
HOGENOM:HOG000218208 RefSeq:YP_261467.1 ProteinModelPortal:Q4K8G6
STRING:Q4K8G6 GeneID:3478498 KEGG:pfl:PFL_4375 PATRIC:19878178
OMA:VFGAPFP ProtClustDB:CLSK2301589
BioCyc:PFLU220664:GIX8-4410-MONOMER Uniprot:Q4K8G6
Length = 324
Score = 119 (46.9 bits), Expect = 0.00024, P = 0.00024
Identities = 57/210 (27%), Positives = 90/210 (42%)
Query: 119 MTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDP-----SLKRARQKLLQKHQVF 173
M +LVTGAAGF+G AL +RG L + + P + R + L +V
Sbjct: 1 MNILVTGAAGFLGRRLIQALLERGS----LTDRHGQLHPIQRITAFDRDPVQGLDDPRVQ 56
Query: 174 IVEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKS 233
+ GD+ D +L L D + HLAA + A + + N + LLE +
Sbjct: 57 VKGGDITDPQVLANLIDANT-QGIFHLAAVVSSQ-AESDFDLGMRVNFSATQGLLERARQ 114
Query: 234 VNPQPSIVWASSSSVYGLNTQVPFSESHRTDQ---PASLYAATKKAGEEIAHTYNHIYGL 290
+ P V SS +V+G Q+P ++ DQ P S Y K + + Y+ +
Sbjct: 115 LGTCPKWVMTSSVAVFG--GQLP--DTVGDDQVWSPQSSYGTQKAMNDLLLADYSRRGFV 170
Query: 291 ALTGLRFFTVYGPWGRPDMAYFFFTKDILQ 320
LR T+ G+P++A F I++
Sbjct: 171 DGRSLRMPTIVVRPGKPNLAASSFASGIIR 200
>UNIPROTKB|I3LIF3 [details] [associations]
symbol:HSD3B7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006694 "steroid biosynthetic process" evidence=IEA]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
GeneTree:ENSGT00550000074557 OMA:PCGLRLV EMBL:CU914342
Ensembl:ENSSSCT00000029053 Uniprot:I3LIF3
Length = 363
Score = 123 (48.4 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 52/200 (26%), Positives = 82/200 (41%)
Query: 119 MTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGD 178
+ LVTG GF+G H L ++ + L F+ + P L+ +Q V ++GD
Sbjct: 10 LVYLVTGGCGFLGEHVVRMLLQQEPRLCELRVFDLHLGPWLEELETGPVQ---VTAIQGD 66
Query: 179 LNDAPLLTKLFDVVPFTHV-LHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQ 237
+ A ++ V HV +H A V + +P++ N+ G N++E C N
Sbjct: 67 VTQAH---EVAAAVAGAHVVIHTAGLVDV-FGRASPETIHEVNVQGTQNVIEACVQ-NGT 121
Query: 238 PSIVWASSSSVYGLNTQ----VPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALT 293
+V+ SS V G T+ P+ +HR P S A + E L
Sbjct: 122 RFLVYTSSMEVVGPTTRGNENTPYEAAHRHPYPRSKALAERLVLEANGRKVRGGLPLVTC 181
Query: 294 GLRFFTVYGPWGRPDMAYFF 313
LR +YG G M F+
Sbjct: 182 ALRPTGIYGE-GHQIMKDFY 200
Score = 37 (18.1 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 6/23 (26%), Positives = 11/23 (47%)
Query: 423 AYKDFGYKPTTDLAAGLRKFVKW 445
A + FGY+P + ++W
Sbjct: 332 ALRHFGYEPLFSWEESRARTIRW 354
>WB|WBGene00017429 [details] [associations]
symbol:F13D11.4 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0016616 "oxidoreductase activity, acting on the
CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0009058
"biosynthetic process" evidence=IEA] InterPro:IPR002225
Pfam:PF01073 InterPro:IPR016040 eggNOG:COG0451 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
GeneTree:ENSGT00390000002618 HOGENOM:HOG000167998 EMBL:FO081142
PIR:T16059 RefSeq:NP_508978.3 ProteinModelPortal:Q19391 SMR:Q19391
PaxDb:Q19391 EnsemblMetazoa:F13D11.4.1 EnsemblMetazoa:F13D11.4.2
GeneID:184416 KEGG:cel:CELE_F13D11.4 UCSC:F13D11.4.1 CTD:184416
WormBase:F13D11.4 InParanoid:Q19391 OMA:ESDNERI NextBio:924666
Uniprot:Q19391
Length = 343
Score = 119 (46.9 bits), Expect = 0.00027, P = 0.00027
Identities = 45/170 (26%), Positives = 81/170 (47%)
Query: 117 NGMTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVE 176
N VLVTGA+GF+G+HC L K G V G + + + +KL +K+ + +VE
Sbjct: 4 NETKVLVTGASGFIGTHCVEILLKNGYRVRG--TVRDLNNKAKVQPIKKLDKKNHLELVE 61
Query: 177 GDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLE-VCKSVN 235
DL D+ K V +VLH+A+ + + + + + + + G +N+L+ + + N
Sbjct: 62 ADLLDSTCWKKA--VAGCDYVLHVASP----FPIVSDERCITTAVEGTMNVLKAIAEDGN 115
Query: 236 PQPSIVWASSSSVY-GLNTQVPFSE---SHRTDQPASLYAATKKAGEEIA 281
+ ++ +S ++V G F E S+ Y +K E+ A
Sbjct: 116 VRKLVLTSSCAAVNEGYTQDRVFDEDSWSNLESDMVDCYIKSKTLAEKAA 165
>TAIR|locus:2119161 [details] [associations]
symbol:FLDH "farnesol dehydrogenase" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006721 "terpenoid
metabolic process" evidence=ISS] [GO:0044237 "cellular metabolic
process" evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005773 "vacuole" evidence=IDA] [GO:0005783 "endoplasmic
reticulum" evidence=IDA] [GO:0005774 "vacuolar membrane"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0009788 "negative regulation of abscisic acid mediated
signaling pathway" evidence=IMP] [GO:0016487 "farnesol metabolic
process" evidence=IDA] [GO:0047886 "farnesol dehydrogenase
activity" evidence=IDA] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0009744 "response to sucrose stimulus"
evidence=RCA] [GO:0009749 "response to glucose stimulus"
evidence=RCA] [GO:0009750 "response to fructose stimulus"
evidence=RCA] [GO:0009853 "photorespiration" evidence=RCA]
[GO:0034976 "response to endoplasmic reticulum stress"
evidence=RCA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005783 GO:GO:0005886 GO:GO:0005774 EMBL:CP002687
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AL035678
EMBL:AL161583 GO:GO:0009788 UniGene:At.46532 UniGene:At.66644
UniGene:At.68114 GO:GO:0016487 EMBL:AF370578 EMBL:BT002342
IPI:IPI00530523 PIR:T05987 RefSeq:NP_195062.1 HSSP:Q8T8E9
ProteinModelPortal:Q9SZB3 SMR:Q9SZB3 IntAct:Q9SZB3 STRING:Q9SZB3
PRIDE:Q9SZB3 EnsemblPlants:AT4G33360.1 GeneID:829473
KEGG:ath:AT4G33360 TAIR:At4g33360 HOGENOM:HOG000168005
InParanoid:Q9SZB3 KO:K15891 OMA:EVELAYG PhylomeDB:Q9SZB3
ProtClustDB:CLSN2685493 ArrayExpress:Q9SZB3 Genevestigator:Q9SZB3
GO:GO:0047886 Uniprot:Q9SZB3
Length = 344
Score = 119 (46.9 bits), Expect = 0.00027, P = 0.00027
Identities = 61/250 (24%), Positives = 102/250 (40%)
Query: 113 PRRPN----GMTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQ 168
P+ PN M +LVTG+ G++G+ L +RG V L ++R
Sbjct: 3 PKMPNTETENMKILVTGSTGYLGARLCHVLLRRGHSVRAL----------VRRTSDLSDL 52
Query: 169 KHQVFIVEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLL 228
+V + GD+ D LT V H AA V + +P +++ N+ G N+L
Sbjct: 53 PPEVELAYGDVTDYRSLTDACSGCDI--VFHAAAL--VEPWLPDPSRFISVNVGGLKNVL 108
Query: 229 EVCKSVNPQPSIVWASSSSVYGLNTQVPFSES--HRTDQPASLYAATKKAGEEIAHTYNH 286
E K I++ SS G +E+ H + Y +K +++A
Sbjct: 109 EAVKETKTVQKIIYTSSFFALGSTDGSVANENQVHNERFFCTEYERSKAVADKMALNAAS 168
Query: 287 IYGLALTGLRFFTVYGPWGRPDMAYFFFTKDI--LQGKTIDVYKTQDDREVARDFTYIDD 344
G+ + L ++GP G+ A I G+ + DR F+++DD
Sbjct: 169 -EGVPIILLYPGVIFGP-GKLTSANMVARMLIERFNGRLPGYIGSGTDRY---SFSHVDD 223
Query: 345 VVKGCVGALD 354
VV+G V A++
Sbjct: 224 VVEGHVAAME 233
>UNIPROTKB|I3L2H6 [details] [associations]
symbol:HSD3B7 "3 beta-hydroxysteroid dehydrogenase type 7"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006694 EMBL:AC135048 HGNC:HGNC:18324 GO:GO:0047016
GO:GO:0001558 Ensembl:ENST00000574447 Bgee:I3L2H6 Uniprot:I3L2H6
Length = 176
Score = 111 (44.1 bits), Expect = 0.00028, P = 0.00028
Identities = 41/150 (27%), Positives = 69/150 (46%)
Query: 119 MTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGD 178
+ LVTG GF+G H L +R + L F+ + P L+ + ++ V ++GD
Sbjct: 10 LVYLVTGGCGFLGEHVVRMLLQREPRLGELRVFDQHLGPWLEELKTGPVR---VTAIQGD 66
Query: 179 LNDAPLLTKLFDVVPFTHV-LHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQ 237
+ A ++ V HV +H A V + +P++ N+ G N++E C +
Sbjct: 67 VTQAH---EVAAAVAGAHVVIHTAGLVDV-FGRASPKTIHEVNVQGTRNVIEACVQTGTR 122
Query: 238 PSIVWASSSSVYGLNTQV-PFSESHRTDQP 266
+V+ SS V G NT+ PF + D P
Sbjct: 123 -FLVYTSSMEVVGPNTKGHPFYRGNE-DTP 150
>RGD|67377 [details] [associations]
symbol:Hsd3b1 "hydroxy-delta-5-steroid dehydrogenase, 3 beta- and
steroid delta-isomerase 1" species:10116 "Rattus norvegicus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity" evidence=IDA]
[GO:0004769 "steroid delta-isomerase activity" evidence=IDA]
[GO:0005743 "mitochondrial inner membrane" evidence=ISO] [GO:0005758
"mitochondrial intermembrane space" evidence=ISO] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0006700
"C21-steroid hormone biosynthetic process" evidence=IDA] [GO:0006702
"androgen biosynthetic process" evidence=IDA] [GO:0010288 "response
to lead ion" evidence=IEP] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016853 "isomerase activity" evidence=TAS]
[GO:0021766 "hippocampus development" evidence=IEP] [GO:0030283
"testosterone dehydrogenase [NAD(P)] activity" evidence=TAS]
[GO:0031966 "mitochondrial membrane" evidence=IEA] [GO:0033327
"Leydig cell differentiation" evidence=IEP] [GO:0034698 "response to
gonadotropin stimulus" evidence=IEP] [GO:0034757 "negative
regulation of iron ion transport" evidence=IMP] [GO:0046686
"response to cadmium ion" evidence=IEP] [GO:0051412 "response to
corticosterone stimulus" evidence=IEP] InterPro:IPR002225
Pfam:PF01073 UniPathway:UPA00062 InterPro:IPR016040 RGD:67377
GO:GO:0016021 GO:GO:0046686 GO:GO:0021766 eggNOG:COG0451
HOGENOM:HOG000167989 HOVERGEN:HBG000014 KO:K00070 OrthoDB:EOG4K3KWG
GO:GO:0003854 GO:GO:0000166 GO:GO:0004769 GO:GO:0006702
Gene3D:3.40.50.720 OMA:MAGWSCL GO:GO:0005789 GO:GO:0031966
GO:GO:0033327 GO:GO:0051412 GO:GO:0010288
GeneTree:ENSGT00550000074557 EMBL:L17138 EMBL:BC089937
IPI:IPI00555268 PIR:A48769 RefSeq:NP_058961.4 RefSeq:XP_003749409.1
UniGene:Rn.109394 ProteinModelPortal:Q62878 STRING:Q62878
Ensembl:ENSRNOT00000026306 GeneID:100911154 GeneID:29632
KEGG:rno:100911154 KEGG:rno:29632 UCSC:RGD:67377 CTD:15497
InParanoid:Q62878 NextBio:609864 Genevestigator:Q62878
GermOnline:ENSRNOG00000019441 GO:GO:0030283 GO:GO:0006700
GO:GO:0034757 GO:GO:0034698 Uniprot:Q62878
Length = 373
Score = 116 (45.9 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 45/168 (26%), Positives = 73/168 (43%)
Query: 118 GMTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEG 177
G + LVTGA GF+G L + D + + + + P + L +V ++EG
Sbjct: 3 GWSCLVTGAGGFLGQRIVQLLVQEKD-LKEVRVLDKVFRPETREEFFNLGTSIKVTVLEG 61
Query: 178 DLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNP-QSYVASNIAGFVNLLEVCKSVNP 236
D+ D L + + V+H AA V NP Q+ + N+ G NLLE C +
Sbjct: 62 DILDTQCLRRACQGISV--VIHTAALIDVTGV--NPRQTILDVNLKGTQNLLEACVQASV 117
Query: 237 QPSIVWASSSSVYGLNTQVPF-----SESHRTDQPASLYAATKKAGEE 279
P+ ++ S+ V G N+ E H ++ Y +KK E+
Sbjct: 118 -PAFIYCSTVDVAGPNSYKKIILNGHEEEHHESTWSNPYPYSKKMAEK 164
Score = 43 (20.2 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 8/23 (34%), Positives = 11/23 (47%)
Query: 423 AYKDFGYKPTTDLAAGLRKFVKW 445
A +D GYKP +K +W
Sbjct: 334 AQRDLGYKPLVSWEEAKQKTSEW 356
>ZFIN|ZDB-GENE-081105-30 [details] [associations]
symbol:hsd3b1 "hydroxy-delta-5-steroid
dehydrogenase, 3 beta- and steroid delta-isomerase 1" species:7955
"Danio rerio" [GO:0016616 "oxidoreductase activity, acting on the
CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040
ZFIN:ZDB-GENE-081105-30 eggNOG:COG0451 HOGENOM:HOG000167989
HOVERGEN:HBG000014 OrthoDB:EOG4K3KWG GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006694 OMA:DACVEAS EMBL:BC074074
IPI:IPI00809590 UniGene:Dr.32164 ProteinModelPortal:Q6GMH6
STRING:Q6GMH6 InParanoid:Q6GMH6 Bgee:Q6GMH6 Uniprot:Q6GMH6
Length = 402
Score = 114 (45.2 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 62/201 (30%), Positives = 84/201 (41%)
Query: 117 NGMTVLVTGAAGFVGSHC-SLALKKRGDGVLGL-D-NFNSYYDPSLKRARQKLLQKHQVF 173
+G +VTGA GF+G L LK+ + L D N S SL R + +V
Sbjct: 32 SGEVCVVTGACGFLGERLVRLLLKEEKLAEIRLLDRNIRSELIQSLDDCRGET----KVS 87
Query: 174 IVEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKS 233
+ EGD+ + LL + V H A+ V A++ + Y N+ LLE C
Sbjct: 88 VFEGDIRNPELLRRACKGAAL--VFHTASLIDVIGAVEYSELY-GVNVKATKLLLETCIQ 144
Query: 234 VNPQPSIVWASSSSVYGLNTQ-VPFSESHRTDQPASL-----YAATKKAGEEIAHTYNH- 286
N PS ++ SS V G N P + D P S Y+ TKK EEI N
Sbjct: 145 ENV-PSFIYTSSIEVAGPNPSGEPIINGNE-DTPYSSRLKFSYSKTKKEAEEICLQANGD 202
Query: 287 --IYG--LALTGLRFFTVYGP 303
G LA LR ++GP
Sbjct: 203 LLCNGGQLATCALRPMYIFGP 223
Score = 46 (21.3 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 423 AYKDFGYKPTTDLAAGLRKFVKWYVS 448
A++DFGY P + + W+ S
Sbjct: 365 AHRDFGYTPRYEWEEARKCTTDWFAS 390
>UNIPROTKB|H9L1L3 [details] [associations]
symbol:H9L1L3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
EMBL:AADN02078154 EMBL:AADN02078155 Ensembl:ENSGALT00000035571
GeneTree:ENSGT00560000077526 OMA:PACHKIS Uniprot:H9L1L3
Length = 109
Score = 96 (38.9 bits), Expect = 0.00046, P = 0.00046
Identities = 30/106 (28%), Positives = 48/106 (45%)
Query: 118 GMTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEG 177
G+ +VTG GF+G H L + + L F+ + DP L + + +V + G
Sbjct: 9 GLVFVVTGGCGFLGRHLVRLLLEEEPDLRELRVFDLHLDPDLPDGERPI--NPRVRALRG 66
Query: 178 DLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAG 223
D+ DA + + + VLH AA V + +PQS N+ G
Sbjct: 67 DVGDAGAVGRALEGADV--VLHTAALVDV-WGNADPQSIARVNVQG 109
>UNIPROTKB|Q4K5C5 [details] [associations]
symbol:PFL_5490 "NAD dependent epimerase/dehydratase family
protein" species:220664 "Pseudomonas protegens Pf-5" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000076
GenomeReviews:CP000076_GR GO:GO:0044237 GO:GO:0000271
HOGENOM:HOG000167992 RefSeq:YP_262558.1 ProteinModelPortal:Q4K5C5
STRING:Q4K5C5 GeneID:3479881 KEGG:pfl:PFL_5490 PATRIC:19880467
OMA:EPNPAND ProtClustDB:CLSK881263
BioCyc:PFLU220664:GIX8-5527-MONOMER Uniprot:Q4K5C5
Length = 311
Score = 116 (45.9 bits), Expect = 0.00049, P = 0.00049
Identities = 56/231 (24%), Positives = 100/231 (43%)
Query: 122 LVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGDLND 181
L+TG GF G + + L++ G + G R + + D+ D
Sbjct: 11 LITGLEGFTGRYVADELRRSGYEIFG--------------TRHSGADEREAGCFRVDICD 56
Query: 182 APLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQP-SI 240
L ++ + V V+HLAA + V + + +N+ G NLLE ++ P ++
Sbjct: 57 LAALRRVVEEVEPEVVVHLAAISFVAHG--EADAIYRANVVGTRNLLEALAGLSRTPRAV 114
Query: 241 VWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRFFTV 300
+ ASS++VYG N V + + PA+ YA +K A E +A + H + + +T
Sbjct: 115 LLASSANVYG-NAPVELIDESVSLAPANDYAVSKLAMEYMARLWMHRLPIVIARPFNYTG 173
Query: 301 YGPWGR---PDMAYFFFTK-DILQGKTIDVYKTQDD-REVARDFTYIDDVV 346
G P + F + +++ +DV + D R VA + + +VV
Sbjct: 174 VGQASHFLIPKIVSHFQRRASVIELGNLDVERDFSDVRVVALAYVRLLEVV 224
>WB|WBGene00022616 [details] [associations]
symbol:hsd-3 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006694 GeneTree:ENSGT00550000074557
EMBL:FO081547 RefSeq:NP_508852.3 ProteinModelPortal:A4UVJ7
EnsemblMetazoa:ZC449.6 GeneID:260026 KEGG:cel:CELE_ZC449.6
CTD:260026 WormBase:ZC449.6 HOGENOM:HOG000266975 InParanoid:A4UVJ7
OMA:IVVDPNP NextBio:952782 Uniprot:A4UVJ7
Length = 359
Score = 117 (46.2 bits), Expect = 0.00050, P = 0.00050
Identities = 51/191 (26%), Positives = 84/191 (43%)
Query: 122 LVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQ--KHQVFIVEGDL 179
++TG GF+G+H AL+K GD + DP+ + + + K V +G
Sbjct: 8 VITGGGGFLGAHLIAALQKNGDRTKCI-----VVDPNPRLSHFSAIDFDKSLVEYEKGSF 62
Query: 180 NDAPLLTKLFDVVPFT-HVLHLAAQAGVR-YAMQNPQSYV-ASNIAGFVNLLEVCKSVNP 236
D +L + V+P V HL A + Q + YV A N+ G L+E CK
Sbjct: 63 LDRKVLER---VLPNAITVFHLCAIGHTGWFGAQKHREYVYAFNVTGTKFLIEKCKFFGV 119
Query: 237 QPSIVWASSSSVYGLNTQV---PFSESHRT-DQPASLYAATKKAGEEIAHTYNHIYGLAL 292
P +++SS +V + + SE + + +Y+++K E + + I
Sbjct: 120 -PRFIYSSSIAVVFVGKPIYNCDESEPYPLKSEYLDIYSSSKAEAEAFVRSQSTIQ-FKT 177
Query: 293 TGLRFFTVYGP 303
T LRF +YGP
Sbjct: 178 TCLRFRAIYGP 188
>UNIPROTKB|Q5IFP1 [details] [associations]
symbol:HSD3B "3 beta-hydroxysteroid dehydrogenase/Delta
5-->4-isomerase" species:9615 "Canis lupus familiaris" [GO:0006694
"steroid biosynthetic process" evidence=IEA] [GO:0031966
"mitochondrial membrane" evidence=IEA] [GO:0005789 "endoplasmic
reticulum membrane" evidence=IEA] [GO:0004769 "steroid
delta-isomerase activity" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR002225
Pfam:PF01073 UniPathway:UPA00062 InterPro:IPR016040 GO:GO:0016021
eggNOG:COG0451 HOGENOM:HOG000167989 HOVERGEN:HBG000014 KO:K00070
OrthoDB:EOG4K3KWG GO:GO:0003854 GO:GO:0000166 GO:GO:0004769
Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0031966 GO:GO:0006694
CTD:3284 EMBL:AY739720 RefSeq:NP_001010954.1 UniGene:Cfa.13172
ProteinModelPortal:Q5IFP1 STRING:Q5IFP1 GeneID:483146
KEGG:cfa:483146 InParanoid:Q5IFP1 NextBio:20857590 Uniprot:Q5IFP1
Length = 373
Score = 115 (45.5 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 47/169 (27%), Positives = 73/169 (43%)
Query: 118 GMTVLVTGAAGFVGSHCS--LALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIV 175
G + LVTGA GF+G LA +K + LD + P L KL K ++ +V
Sbjct: 3 GWSCLVTGAGGFLGQRIVHLLAEEKELQEIRALDKA---FRPELLEEFSKLQSKTKLTMV 59
Query: 176 EGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVN 235
EGD+ D L + V+H A+ V + ++ + N+ G LLE C +
Sbjct: 60 EGDILDEQCLKRACQGTSV--VIHTASVIDVMNVIHR-ETIMNVNLKGTQLLLEACAQAS 116
Query: 236 PQPSIVWASSSSVYGLNT-----QVPFSESHRTDQPASLYAATKKAGEE 279
P ++ S+ V G N+ Q E H ++ Y +KK E+
Sbjct: 117 V-PIFIYTSTIEVAGPNSYRDIIQNAHEEEHLESTWSAPYPYSKKLAEK 164
Score = 43 (20.2 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 8/23 (34%), Positives = 11/23 (47%)
Query: 423 AYKDFGYKPTTDLAAGLRKFVKW 445
A +D GYKP +K +W
Sbjct: 334 AQRDLGYKPLFSWEEAKQKTTEW 356
>TIGR_CMR|CBU_0676 [details] [associations]
symbol:CBU_0676 "NAD dependent epimerase/dehydratase"
species:227377 "Coxiella burnetii RSA 493" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GenomeReviews:AE016828_GR GO:GO:0044237 EMBL:AF387640
ProteinModelPortal:Q93N67 PRIDE:Q93N67 PATRIC:17930035
HOGENOM:HOG000168002 ProtClustDB:CLSK905415
BioCyc:CBUR227377:GJ7S-674-MONOMER Uniprot:Q93N67
Length = 337
Score = 116 (45.9 bits), Expect = 0.00057, P = 0.00057
Identities = 56/210 (26%), Positives = 90/210 (42%)
Query: 121 VLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGDLN 180
+LVTG AG+VGS L + G V D + D L + L IVEGD+
Sbjct: 8 ILVTGGAGYVGSALVPQLLELGYRVTVYDTL-FFGDDFLPKENPYLN------IVEGDIR 60
Query: 181 DAPLLTKLFDVVPFTHVLHLAAQAG-VRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQPS 239
D L + F V+ LA + + + S + N+ F +++ K+ +
Sbjct: 61 DTERLKQCFKDADA--VISLACISNDASFELDETLS-TSINLEAFEPMVKAAKAAGVK-R 116
Query: 240 IVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRFFT 299
++ASSSSVYG++ +E H P +LY K E + + + +T +R T
Sbjct: 117 FIYASSSSVYGVSETKDVTEEHPL-VPLTLYNKYKGMCEPLLFKHQSPEFVCVT-IRPAT 174
Query: 300 V--YGPWGRPDMAYFFFTKDILQGKTIDVY 327
+ Y P R D++ T + I V+
Sbjct: 175 LCGYAPRQRLDLSVNILTNHAVNNNKITVF 204
>UNIPROTKB|F1PED8 [details] [associations]
symbol:HSD3B2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
OMA:MAGWSCL GO:GO:0006694 GeneTree:ENSGT00550000074557
EMBL:AAEX03011027 Ensembl:ENSCAFT00000015969 Uniprot:F1PED8
Length = 377
Score = 115 (45.5 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 47/169 (27%), Positives = 73/169 (43%)
Query: 118 GMTVLVTGAAGFVGSHCS--LALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIV 175
G + LVTGA GF+G LA +K + LD + P L KL K ++ +V
Sbjct: 7 GWSCLVTGAGGFLGQRIVHLLAEEKELQEIRALDKA---FRPELLEEFSKLQSKTKLTMV 63
Query: 176 EGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVN 235
EGD+ D L + V+H A+ V + ++ + N+ G LLE C +
Sbjct: 64 EGDILDEQCLKRACQGTSV--VIHTASVIDVMNVIHR-ETIMNVNLKGTQLLLEACAQAS 120
Query: 236 PQPSIVWASSSSVYGLNT-----QVPFSESHRTDQPASLYAATKKAGEE 279
P ++ S+ V G N+ Q E H ++ Y +KK E+
Sbjct: 121 V-PIFIYTSTIEVAGPNSYRDIIQNAHEEEHLESTWSAPYPYSKKLAEK 168
Score = 43 (20.2 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 8/23 (34%), Positives = 11/23 (47%)
Query: 423 AYKDFGYKPTTDLAAGLRKFVKW 445
A +D GYKP +K +W
Sbjct: 338 AQRDLGYKPLFSWEEAKQKTTEW 360
>RGD|1592771 [details] [associations]
symbol:Hsd3b "3 beta-hydroxysteroid
dehydrogenase/delta-5-delta-4 isomerase type II" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0004769 "steroid delta-isomerase activity"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0031966 "mitochondrial membrane" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 UniPathway:UPA00062
InterPro:IPR016040 RGD:1592771 GO:GO:0016021 eggNOG:COG0451
HOGENOM:HOG000167989 HOVERGEN:HBG000014 KO:K00070 OrthoDB:EOG4K3KWG
GO:GO:0003854 GO:GO:0000166 GO:GO:0004769 Gene3D:3.40.50.720
GO:GO:0005789 GO:GO:0031966 GO:GO:0006694 UniGene:Rn.128814
GermOnline:ENSRNOG00000019454 EMBL:M38179 EMBL:S63167
IPI:IPI00554001 PIR:A40378 PIR:B39051 RefSeq:NP_001036084.1
ProteinModelPortal:P22072 STRING:P22072 PhosphoSite:P22072
GeneID:682974 KEGG:rno:682974 UCSC:RGD:1592771 CTD:111785
InParanoid:P22072 BindingDB:P22072 ChEMBL:CHEMBL4821 NextBio:724140
ArrayExpress:P22072 Genevestigator:P22072 Uniprot:P22072
Length = 373
Score = 118 (46.6 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 48/169 (28%), Positives = 73/169 (43%)
Query: 118 GMTVLVTGAAGFVGSHC--SLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIV 175
G + LVTGA GFVG L +K V LD + P K KL K +V ++
Sbjct: 3 GWSCLVTGAGGFVGQRIIRMLVQEKELQEVRALDKV---FRPETKEEFSKLQTKAKVTML 59
Query: 176 EGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVN 235
EGD+ DA L + + V+H A+ + Q+ + N+ G NLLE +
Sbjct: 60 EGDILDAQYLRRACQGISV--VIHTASVMDFSRVLPR-QTILDVNLKGTQNLLEAGIHAS 116
Query: 236 PQPSIVWASSSSVYGLNTQVPF-----SESHRTDQPASLYAATKKAGEE 279
P+ ++ S+ V G N+ E H ++ Y +KK E+
Sbjct: 117 V-PAFIYCSTVDVAGPNSYKKTILNGREEEHHESTWSNPYPYSKKMAEK 164
Score = 39 (18.8 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 7/23 (30%), Positives = 11/23 (47%)
Query: 423 AYKDFGYKPTTDLAAGLRKFVKW 445
A +D GY+P +K +W
Sbjct: 334 AQRDLGYEPLVSWEEAKQKTSEW 356
>UNIPROTKB|P22072 [details] [associations]
symbol:Hsd3b "3 beta-hydroxysteroid dehydrogenase/Delta
5-->4-isomerase type 2" species:10116 "Rattus norvegicus"
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR002225
Pfam:PF01073 UniPathway:UPA00062 InterPro:IPR016040 RGD:1592771
GO:GO:0016021 eggNOG:COG0451 HOGENOM:HOG000167989
HOVERGEN:HBG000014 KO:K00070 OrthoDB:EOG4K3KWG GO:GO:0003854
GO:GO:0000166 GO:GO:0004769 Gene3D:3.40.50.720 GO:GO:0005789
GO:GO:0031966 GO:GO:0006694 UniGene:Rn.128814
GermOnline:ENSRNOG00000019454 EMBL:M38179 EMBL:S63167
IPI:IPI00554001 PIR:A40378 PIR:B39051 RefSeq:NP_001036084.1
ProteinModelPortal:P22072 STRING:P22072 PhosphoSite:P22072
GeneID:682974 KEGG:rno:682974 UCSC:RGD:1592771 CTD:111785
InParanoid:P22072 BindingDB:P22072 ChEMBL:CHEMBL4821 NextBio:724140
ArrayExpress:P22072 Genevestigator:P22072 Uniprot:P22072
Length = 373
Score = 118 (46.6 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 48/169 (28%), Positives = 73/169 (43%)
Query: 118 GMTVLVTGAAGFVGSHC--SLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIV 175
G + LVTGA GFVG L +K V LD + P K KL K +V ++
Sbjct: 3 GWSCLVTGAGGFVGQRIIRMLVQEKELQEVRALDKV---FRPETKEEFSKLQTKAKVTML 59
Query: 176 EGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVN 235
EGD+ DA L + + V+H A+ + Q+ + N+ G NLLE +
Sbjct: 60 EGDILDAQYLRRACQGISV--VIHTASVMDFSRVLPR-QTILDVNLKGTQNLLEAGIHAS 116
Query: 236 PQPSIVWASSSSVYGLNTQVPF-----SESHRTDQPASLYAATKKAGEE 279
P+ ++ S+ V G N+ E H ++ Y +KK E+
Sbjct: 117 V-PAFIYCSTVDVAGPNSYKKTILNGREEEHHESTWSNPYPYSKKMAEK 164
Score = 39 (18.8 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 7/23 (30%), Positives = 11/23 (47%)
Query: 423 AYKDFGYKPTTDLAAGLRKFVKW 445
A +D GY+P +K +W
Sbjct: 334 AQRDLGYEPLVSWEEAKQKTSEW 356
>TAIR|locus:2203771 [details] [associations]
symbol:3BETAHSD/D1
"3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA;ISS] [GO:0006694 "steroid
biosynthetic process" evidence=IEA;ISS] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0016020 "membrane" evidence=IDA] [GO:0047012
"sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating)
activity" evidence=IGI;IDA] [GO:0006084 "acetyl-CoA metabolic
process" evidence=RCA] [GO:0016126 "sterol biosynthetic process"
evidence=RCA] [GO:0016132 "brassinosteroid biosynthetic process"
evidence=RCA] [GO:0019745 "pentacyclic triterpenoid biosynthetic
process" evidence=RCA] UniPathway:UPA00770 InterPro:IPR002225
Pfam:PF01073 PROSITE:PS50845 InterPro:IPR016040 GO:GO:0016021
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0016020
eggNOG:COG0451 HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0016126 EMBL:AC015449
KO:K07748 GO:GO:0047012 EMBL:AY957470 EMBL:AK117478 EMBL:BT005166
EMBL:AY085272 IPI:IPI00543327 IPI:IPI00545978 PIR:F96513
RefSeq:NP_564502.1 RefSeq:NP_849779.1 UniGene:At.38654
ProteinModelPortal:Q9FX01 SMR:Q9FX01 IntAct:Q9FX01 PaxDb:Q9FX01
PRIDE:Q9FX01 EnsemblPlants:AT1G47290.2 GeneID:841132
KEGG:ath:AT1G47290 TAIR:At1g47290 InParanoid:Q9FX01 OMA:YLVELAY
PhylomeDB:Q9FX01 ProtClustDB:CLSN2688501 Genevestigator:Q9FX01
Uniprot:Q9FX01
Length = 439
Score = 117 (46.2 bits), Expect = 0.00070, P = 0.00070
Identities = 67/265 (25%), Positives = 110/265 (41%)
Query: 167 LQKHQVFIVEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVN 226
++ +V V DL + + K F V H+AA ++ N Q + N+ G N
Sbjct: 61 IRSGRVQYVSADLRNKTQVVKGFQGAEV--VFHMAAPDS---SINNHQLQYSVNVQGTTN 115
Query: 227 LLEVCKSVNPQPSIVWASSSSVY-GLNTQVPFSES-HRTDQPASLYAATKKAGEEIAHTY 284
+++ C V + I +S S V+ G++ + ES + Y+ATK GE +
Sbjct: 116 VIDACIEVGVKRLIYTSSPSVVFDGVHGTLNADESLPYPPKHNDSYSATKAEGEALILKA 175
Query: 285 NHIYGLALTGLRFFTVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDD 344
N GL +R +++GP G M T GK+ + D DFTY+++
Sbjct: 176 NGRSGLLTCCIRPSSIFGP-GDKLMVPSLVTA-ARAGKSKFII---GDGSNFYDFTYVEN 230
Query: 345 VVKGCVGALDTAXXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVS-ILENLLNTKAKKH 403
VV V A A + Y + N P+ +S +LE L ++
Sbjct: 231 VVHAHV----CAERALASGGEVCAKAAGQAYFITNMEPIKFWEFMSQLLEGL---GYERP 283
Query: 404 VIRMPRNGDVPYTHANVSLAYKDFG 428
I++P + +P + V LAYK G
Sbjct: 284 SIKIPASLMMPIAYL-VELAYKLLG 307
>TAIR|locus:2057786 [details] [associations]
symbol:3BETAHSD/D2
"3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA;ISS] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA;ISS] [GO:0016616 "oxidoreductase activity, acting on
the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0016020
"membrane" evidence=IDA] [GO:0047012 "sterol-4-alpha-carboxylate
3-dehydrogenase (decarboxylating) activity" evidence=IGI;IDA]
[GO:0016126 "sterol biosynthetic process" evidence=RCA] [GO:0019745
"pentacyclic triterpenoid biosynthetic process" evidence=RCA]
UniPathway:UPA00770 InterPro:IPR002225 InterPro:IPR003388
Pfam:PF01073 Pfam:PF02453 PROSITE:PS50845 InterPro:IPR016040
GO:GO:0016021 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020
eggNOG:COG0451 HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0016126 EMBL:AC004484
GO:GO:0047012 EMBL:DQ302749 EMBL:BX818951 EMBL:AK176177
IPI:IPI00540500 IPI:IPI00657508 IPI:IPI00929941 PIR:C84658
RefSeq:NP_001031422.1 RefSeq:NP_180194.2 UniGene:At.38921
ProteinModelPortal:Q67ZE1 SMR:Q67ZE1 PaxDb:Q67ZE1 PRIDE:Q67ZE1
EnsemblPlants:AT2G26260.1 GeneID:817166 KEGG:ath:AT2G26260
TAIR:At2g26260 InParanoid:Q67ZE1 OMA:DTLLWKD PhylomeDB:Q67ZE1
ProtClustDB:CLSN2716544 Genevestigator:Q67ZE1 Uniprot:Q67ZE1
Length = 564
Score = 123 (48.4 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 65/264 (24%), Positives = 106/264 (40%)
Query: 167 LQKHQVFIVEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVN 226
L+ +V + DL D + K F V H+AA ++ N Q + N+ G N
Sbjct: 61 LRSGRVQYISADLRDKSQVVKAFQGAEV--VFHMAAPDS---SINNHQLQYSVNVQGTQN 115
Query: 227 LLEVCKSVNPQPSIVWASSSSVY-GLNTQVPFSESHRTD-QPASLYAATKKAGEEIAHTY 284
+++ C V + I +S S V+ G++ + +ES + Y+ATK GEE+
Sbjct: 116 VIDACVDVGVKRLIYTSSPSVVFDGVHGILNGTESMAYPIKHNDSYSATKAEGEELIMKA 175
Query: 285 NHIYGLALTGLRFFTVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDD 344
N GL +R +++GP R + GK+ + D DFTY+++
Sbjct: 176 NGRNGLLTCCIRPSSIFGPGDR--LLVPSLVAAARAGKSKFII---GDGNNLYDFTYVEN 230
Query: 345 VVKGCVGALDTAXXXXXXXXXXXXPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAKKHV 404
V V A A + Y + N P+ +S L + L +
Sbjct: 231 VAHAHV----CAERALASGGDVSTKAAGQAYFITNMEPIKFWEFMSQLLDGLGYERPS-- 284
Query: 405 IRMPRNGDVPYTHANVSLAYKDFG 428
I++P +P H V L YK G
Sbjct: 285 IKIPAFIMMPIAHL-VELTYKVLG 307
Score = 38 (18.4 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 425 KD-FGYKPTTDLAAGLRKFV 443
KD GY P L G+R+ +
Sbjct: 336 KDRLGYAPVVPLQEGIRRTI 355
>MGI|MGI:96235 [details] [associations]
symbol:Hsd3b3 "hydroxy-delta-5-steroid dehydrogenase, 3 beta-
and steroid delta-isomerase 3" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0004769 "steroid delta-isomerase activity"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IDA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0016616 "oxidoreductase activity,
acting on the CH-OH group of donors, NAD or NADP as acceptor"
evidence=IEA] [GO:0016853 "isomerase activity" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 UniPathway:UPA00062
InterPro:IPR016040 MGI:MGI:96235 GO:GO:0016021 eggNOG:COG0451
HOGENOM:HOG000167989 HOVERGEN:HBG000014 OrthoDB:EOG4K3KWG
GO:GO:0005743 GO:GO:0003854 GO:GO:0000166 GO:GO:0004769
Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0006694 OMA:WVFPRIA
GeneTree:ENSGT00550000074557 EMBL:M77015 IPI:IPI00111855
RefSeq:NP_001155214.1 RefSeq:NP_001155215.1 RefSeq:NP_001155216.1
RefSeq:NP_001155217.1 UniGene:Mm.158717 ProteinModelPortal:P26150
SMR:P26150 STRING:P26150 PaxDb:P26150 PRIDE:P26150
Ensembl:ENSMUST00000090743 Ensembl:ENSMUST00000107018
Ensembl:ENSMUST00000107019 GeneID:15494 KEGG:mmu:15494 CTD:15494
InParanoid:P26150 SABIO-RK:P26150 NextBio:288374 Bgee:P26150
Genevestigator:P26150 GermOnline:ENSMUSG00000062410 Uniprot:P26150
Length = 373
Score = 117 (46.2 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 44/167 (26%), Positives = 73/167 (43%)
Query: 118 GMTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEG 177
G + LVTGA GF+G L + D + + + + P + L +V ++EG
Sbjct: 3 GWSCLVTGAGGFLGQRIIQLLVQEKD-LEEIRVLDKVFKPETREQFFNLGTSIKVTVLEG 61
Query: 178 DLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQ 237
D+ D L + + V+H AA V + Q+ + N+ G NLLE C +
Sbjct: 62 DILDTQYLRRACQGISV--VIHTAAIIDVTGVIPR-QTILDVNLKGTQNLLEACIQASV- 117
Query: 238 PSIVWASSSSVYGLNTQVPF-----SESHRTDQPASLYAATKKAGEE 279
P+ +++SS V G N+ + HR + Y +KK E+
Sbjct: 118 PAFIFSSSVDVAGPNSYKDIVLNGHEDEHRESTWSDPYPYSKKMAEK 164
Score = 39 (18.8 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 7/23 (30%), Positives = 11/23 (47%)
Query: 423 AYKDFGYKPTTDLAAGLRKFVKW 445
A +D GY+P +K +W
Sbjct: 334 AQRDLGYEPLVSWEEAKQKTSEW 356
>RGD|2838 [details] [associations]
symbol:Hsd3b5 "hydroxy-delta-5-steroid dehydrogenase, 3 beta- and
steroid delta-isomerase 5" species:10116 "Rattus norvegicus"
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IDA] [GO:0005496 "steroid binding" evidence=IDA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0005743 "mitochondrial inner
membrane" evidence=ISO] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA;IDA;TAS] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016229 "steroid dehydrogenase activity"
evidence=TAS] [GO:0031966 "mitochondrial membrane" evidence=IEA]
[GO:0042448 "progesterone metabolic process" evidence=IDA]
[GO:0043231 "intracellular membrane-bounded organelle" evidence=IDA]
[GO:0050810 "regulation of steroid biosynthetic process"
evidence=IDA] [GO:0051287 "NAD binding" evidence=IDA]
InterPro:IPR002225 Pfam:PF01073 UniPathway:UPA00062
InterPro:IPR016040 RGD:2838 GO:GO:0043231 GO:GO:0016021
eggNOG:COG0451 HOGENOM:HOG000167989 HOVERGEN:HBG000014 KO:K00070
OrthoDB:EOG4K3KWG GO:GO:0003854 Gene3D:3.40.50.720 GO:GO:0005789
GO:GO:0031966 GO:GO:0006694 GO:GO:0051287 GO:GO:0005496
GeneTree:ENSGT00550000074557 CTD:15496 EMBL:M67465 EMBL:BC092571
IPI:IPI00231782 PIR:A37404 RefSeq:NP_036716.1 RefSeq:XP_003749408.1
UniGene:Rn.34902 ProteinModelPortal:P27364 STRING:P27364
PhosphoSite:P27364 PRIDE:P27364 Ensembl:ENSRNOT00000026290
GeneID:100911116 GeneID:24470 KEGG:rno:100911116 KEGG:rno:24470
UCSC:RGD:2838 InParanoid:P27364 BindingDB:P27364 ChEMBL:CHEMBL4490
NextBio:603409 Genevestigator:P27364 GermOnline:ENSRNOG00000019417
GO:GO:0042448 GO:GO:0050810 Uniprot:P27364
Length = 373
Score = 117 (46.2 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 42/167 (25%), Positives = 75/167 (44%)
Query: 118 GMTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEG 177
G + LVTGA GF+G L + + + + + P K KL K +V ++ G
Sbjct: 3 GWSCLVTGAGGFLGQRIVQMLVQEKE-LQEVRVLYRTFSPKHKEELSKLQTKAKVTVLRG 61
Query: 178 DLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQ 237
D+ DA L + + ++H AA + + Q+ + N+ G LL+ C +
Sbjct: 62 DIVDAQFLRRACQGMSV--IIHTAAALDIAGFLPR-QTILDVNVKGTQLLLDACVEASV- 117
Query: 238 PSIVWASSSSVYGLNTQVPF-----SESHRTDQPASLYAATKKAGEE 279
P+ +++SS+ V G N+ E HR ++ Y +K+ E+
Sbjct: 118 PAFIYSSSTGVAGPNSYKETILNDREEEHRESTWSNPYPYSKRMAEK 164
Score = 39 (18.8 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 7/23 (30%), Positives = 11/23 (47%)
Query: 423 AYKDFGYKPTTDLAAGLRKFVKW 445
A +D GY+P +K +W
Sbjct: 334 AQRDLGYEPLVSWEEAKQKTSEW 356
>UNIPROTKB|C9JFU6 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005739 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 EMBL:AC018878 HGNC:HGNC:17729
IPI:IPI00916816 ProteinModelPortal:C9JFU6 SMR:C9JFU6 STRING:C9JFU6
Ensembl:ENST00000444193 ArrayExpress:C9JFU6 Bgee:C9JFU6
Uniprot:C9JFU6
Length = 121
Score = 93 (37.8 bits), Expect = 0.00097, P = 0.00097
Identities = 28/98 (28%), Positives = 45/98 (45%)
Query: 210 MQNPQSYVASNIAGFVNLLEVCKSVNPQPSIVWASSSSVYGLNTQVPFSESH----RTDQ 265
M NP + +N G +N+L + K V + ++ AS+S VYG P SE +
Sbjct: 1 MYNPIKTLKTNTIGTLNMLGLAKRVGAR--LLLASTSEVYGDPEVHPQSEDYWGHVNPIG 58
Query: 266 PASLYAATKKAGEEIAHTYNHIYGLALTGLRFFTVYGP 303
P + Y K+ E + + Y G+ + R F +GP
Sbjct: 59 PRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGP 96
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.135 0.404 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 476 440 0.00089 118 3 11 22 0.39 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 196
No. of states in DFA: 615 (65 KB)
Total size of DFA: 269 KB (2142 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 32.85u 0.10s 32.95t Elapsed: 00:00:01
Total cpu time: 32.89u 0.10s 32.99t Elapsed: 00:00:01
Start: Mon May 20 15:57:15 2013 End: Mon May 20 15:57:16 2013
WARNINGS ISSUED: 1