BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011841
(476 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LIS3|GAE6_ARATH UDP-glucuronate 4-epimerase 6 OS=Arabidopsis thaliana GN=GAE6 PE=1
SV=1
Length = 460
Score = 748 bits (1931), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/462 (79%), Positives = 411/462 (88%), Gaps = 15/462 (3%)
Query: 1 MASPPDTSKTIKLERYNSYLRRLHVTKMLHSSSKLFFRATILIALVLILFFTLNHPPLSD 60
+++ DTSKT+KLERYNSYLR++H TK+L++SSK+ FRAT+L+ALVL+L F +N+PPLSD
Sbjct: 3 LSATADTSKTVKLERYNSYLRKIHSTKVLNASSKVLFRATLLVALVLVLIFAINYPPLSD 62
Query: 61 NTGESGDNNSNNKNNPRNLFTHQHSLLSSSFFSSSFS---TGGAEWEKQVRHSATPRRPN 117
+ + + H+ S LS+ FSSS S GGA WEK+VR S+T +RP+
Sbjct: 63 SRAAAAHH------------LHRRSFLSTGLFSSSSSSSSIGGAAWEKRVRQSSTAKRPH 110
Query: 118 GMTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEG 177
G++VLVTGAAGFVGSHCSLAL+KRGDGVLG DNFN YYDPSLKRARQ+LL+K QVFIVEG
Sbjct: 111 GLSVLVTGAAGFVGSHCSLALRKRGDGVLGFDNFNDYYDPSLKRARQELLEKQQVFIVEG 170
Query: 178 DLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQ 237
DLND PLL KLFDVVPFTH+LHLAAQAGVRYAM+NPQSY+ASNIAGFVNLLEV K+ NPQ
Sbjct: 171 DLNDGPLLRKLFDVVPFTHILHLAAQAGVRYAMKNPQSYIASNIAGFVNLLEVAKAANPQ 230
Query: 238 PSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRF 297
P+IVWASSSSVYGLNT+ PFSE HRTDQPASLYAATKKAGEEIAHTYNHIYGL+LTGLRF
Sbjct: 231 PAIVWASSSSVYGLNTENPFSEEHRTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRF 290
Query: 298 FTVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGALDTAG 357
FTVYGPWGRPDMAYFFFTKDIL GK+ID+Y+TQD++EVARDFTYIDD+VKGCVGALDTA
Sbjct: 291 FTVYGPWGRPDMAYFFFTKDILHGKSIDIYRTQDNQEVARDFTYIDDIVKGCVGALDTAE 350
Query: 358 KSTGSGGKKRGPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAKKHVIRMPRNGDVPYTH 417
KSTGSGGKKRG AQLRVYNLGNTSPVPVGRLVSILE LL TKAKKH+I+MPRNGDVPYTH
Sbjct: 351 KSTGSGGKKRGQAQLRVYNLGNTSPVPVGRLVSILEGLLGTKAKKHLIKMPRNGDVPYTH 410
Query: 418 ANVSLAYKDFGYKPTTDLAAGLRKFVKWYVSYYGIQPRVKKE 459
ANVSLAYKDFGYKPTTDLAAGLRKFVKWYV YYGIQPRVKKE
Sbjct: 411 ANVSLAYKDFGYKPTTDLAAGLRKFVKWYVGYYGIQPRVKKE 452
>sp|Q9LPC1|GAE2_ARATH UDP-glucuronate 4-epimerase 2 OS=Arabidopsis thaliana GN=GAE2 PE=2
SV=1
Length = 434
Score = 590 bits (1521), Expect = e-168, Method: Compositional matrix adjust.
Identities = 290/428 (67%), Positives = 339/428 (79%), Gaps = 28/428 (6%)
Query: 23 LHVTKMLHSSSKLFFRATILIALVLILFFTLNHPPLSDNTGESGDNNSNNKNNPRNLFTH 82
LH T+ S +KL F + + L+ I F+ P+S N ++ R+L T
Sbjct: 24 LHRTRWQSSVAKLAFWSLVFFGLLFIFFY---RSPIS-----------NPDSSRRSLRT- 68
Query: 83 QHSLLSSSFFSSSFSTGGAEWEKQVRHSATPRRPNGMTVLVTGAAGFVGSHCSLALKKRG 142
+S GG WEK+VR SA R NG++VLVTGAAGFVG+H S ALK+RG
Sbjct: 69 -------------YSWGGPAWEKRVRSSARVRTRNGVSVLVTGAAGFVGTHVSAALKRRG 115
Query: 143 DGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGDLNDAPLLTKLFDVVPFTHVLHLAA 202
DGVLGLDNFN YYD SLKR+RQ LL++ VFIVEGD+ND LL KLF+VVPFTHV+HLAA
Sbjct: 116 DGVLGLDNFNDYYDTSLKRSRQALLERSGVFIVEGDINDLSLLKKLFEVVPFTHVMHLAA 175
Query: 203 QAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQPSIVWASSSSVYGLNTQVPFSESHR 262
QAGVRYAM+NP SYV SNIAGFVNLLEVCKS NPQP+IVWASSSSVYGLNT+VPFSE R
Sbjct: 176 QAGVRYAMENPGSYVHSNIAGFVNLLEVCKSANPQPAIVWASSSSVYGLNTKVPFSEKDR 235
Query: 263 TDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRFFTVYGPWGRPDMAYFFFTKDILQGK 322
TDQPASLYAATKKAGEEIAHTYNHIYGL+LTGLRFFTVYGPWGRPDMAYFFFT+DIL+GK
Sbjct: 236 TDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTRDILKGK 295
Query: 323 TIDVYKTQDDREVARDFTYIDDVVKGCVGALDTAGKSTGSGGKKRGPAQLRVYNLGNTSP 382
I +++ + VARDFTYIDD+VKGC+GALDTA KSTGSGGKKRG AQLRV+NLGNTSP
Sbjct: 296 AISIFEGANHGTVARDFTYIDDIVKGCLGALDTAEKSTGSGGKKRGAAQLRVFNLGNTSP 355
Query: 383 VPVGRLVSILENLLNTKAKKHVIRMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKF 442
VPV LVSILE LL KAK++++++PRNGDVP+THAN+S A ++FGYKP+TDL GL+KF
Sbjct: 356 VPVTDLVSILERLLKVKAKRNMMKLPRNGDVPFTHANISSAQREFGYKPSTDLQTGLKKF 415
Query: 443 VKWYVSYY 450
V+WY+ YY
Sbjct: 416 VRWYLGYY 423
>sp|O81312|GAE3_ARATH UDP-glucuronate 4-epimerase 3 OS=Arabidopsis thaliana GN=GAE3 PE=2
SV=1
Length = 430
Score = 588 bits (1516), Expect = e-167, Method: Compositional matrix adjust.
Identities = 287/428 (67%), Positives = 336/428 (78%), Gaps = 26/428 (6%)
Query: 23 LHVTKMLHSSSKLFFRATILIALVLILFFTLNHPPLSDNTGESGDNNSNNKNNPRNLFTH 82
H T+ S +KL F + + + L+ I F+ P+S N + + R+L T
Sbjct: 21 FHRTRWQSSVAKLAFWSLVFVGLIFIFFY---RSPVSSNPADP---------SRRSLRT- 67
Query: 83 QHSLLSSSFFSSSFSTGGAEWEKQVRHSATPRRPNGMTVLVTGAAGFVGSHCSLALKKRG 142
+S GG WEK+VR SA R G +VLVTGAAGFVG+H S ALK+RG
Sbjct: 68 -------------YSWGGPAWEKRVRSSARLRTRRGFSVLVTGAAGFVGTHVSAALKRRG 114
Query: 143 DGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGDLNDAPLLTKLFDVVPFTHVLHLAA 202
DGVLGLDNFN YYDPSLKRARQ LL++ VF+VEGD+NDA LL KLF+VVPFTHV+HLAA
Sbjct: 115 DGVLGLDNFNDYYDPSLKRARQALLERSGVFVVEGDINDAALLKKLFEVVPFTHVMHLAA 174
Query: 203 QAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQPSIVWASSSSVYGLNTQVPFSESHR 262
QAGVRYAM+NP SYV SNIAGFVNLLEVCKS NPQP+IVWASSSSVYGLNT+VPFSE R
Sbjct: 175 QAGVRYAMENPSSYVHSNIAGFVNLLEVCKSANPQPAIVWASSSSVYGLNTKVPFSEKDR 234
Query: 263 TDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRFFTVYGPWGRPDMAYFFFTKDILQGK 322
TDQPASLYAATKKAGEEIAHTYNHIYGL+LTGLRFFTVYGPWGRPDMAYFFFT+DIL+GK
Sbjct: 235 TDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTRDILKGK 294
Query: 323 TIDVYKTQDDREVARDFTYIDDVVKGCVGALDTAGKSTGSGGKKRGPAQLRVYNLGNTSP 382
I +++ + VARDFTYIDD+VKGC+GALDTA KSTGSGGKKRG AQLRV+NLGNTSP
Sbjct: 295 AISIFEGVNHGTVARDFTYIDDIVKGCLGALDTAEKSTGSGGKKRGAAQLRVFNLGNTSP 354
Query: 383 VPVGRLVSILENLLNTKAKKHVIRMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKF 442
VPV LV+ILE LL KAK++++++PRNGDV +THAN+S A ++ GYKPTTDL GL+KF
Sbjct: 355 VPVTDLVTILERLLKVKAKRNIMKLPRNGDVQFTHANISSAQRELGYKPTTDLQTGLKKF 414
Query: 443 VKWYVSYY 450
+WY+ YY
Sbjct: 415 ARWYLGYY 422
>sp|O22141|GAE4_ARATH UDP-glucuronate 4-epimerase 4 OS=Arabidopsis thaliana GN=GAE4 PE=1
SV=1
Length = 437
Score = 585 bits (1508), Expect = e-166, Method: Compositional matrix adjust.
Identities = 273/354 (77%), Positives = 312/354 (88%), Gaps = 2/354 (0%)
Query: 99 GGAEWEKQVRHSATPRRP--NGMTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYD 156
GG WEK++R SA R NG+TVLVTGAAGFVG+H S ALK+RGDGV+GLDNFN YYD
Sbjct: 75 GGPAWEKRLRSSARIRTSTNNGITVLVTGAAGFVGTHVSAALKRRGDGVIGLDNFNDYYD 134
Query: 157 PSLKRARQKLLQKHQVFIVEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSY 216
PSLKRAR+ LL++ +FIVEGD+ND LL KLF +V FTHV+HLAAQAGVRYAM+NP SY
Sbjct: 135 PSLKRARRALLERSGIFIVEGDINDVELLRKLFKIVSFTHVMHLAAQAGVRYAMENPSSY 194
Query: 217 VASNIAGFVNLLEVCKSVNPQPSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKA 276
V SNIAGFVNLLE+CKSVNPQP+IVWASSSSVYGLNT+VPFSE +TDQPASLYAATKKA
Sbjct: 195 VHSNIAGFVNLLEICKSVNPQPAIVWASSSSVYGLNTKVPFSEKDKTDQPASLYAATKKA 254
Query: 277 GEEIAHTYNHIYGLALTGLRFFTVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVA 336
GEEIAHTYNHIYGL+LTGLRFFTVYGPWGRPDMAYFFFTKDIL+GK+I ++++ + VA
Sbjct: 255 GEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTKDILKGKSISIFESANHGTVA 314
Query: 337 RDFTYIDDVVKGCVGALDTAGKSTGSGGKKRGPAQLRVYNLGNTSPVPVGRLVSILENLL 396
RDFTYIDD+VKGC+ ALDTA KSTGSGGKKRGPAQLRV+NLGNTSPVPV LV ILE L
Sbjct: 315 RDFTYIDDIVKGCLAALDTAEKSTGSGGKKRGPAQLRVFNLGNTSPVPVSDLVRILERQL 374
Query: 397 NTKAKKHVIRMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKWYVSYY 450
KAKK++I+MPRNGDVP+THAN+SLA ++ GYKPTTDL GL+KFV+WY+SYY
Sbjct: 375 KVKAKKNLIKMPRNGDVPFTHANISLAQRELGYKPTTDLQTGLKKFVRWYLSYY 428
>sp|Q9STI6|GAE5_ARATH UDP-glucuronate 4-epimerase 5 OS=Arabidopsis thaliana GN=GAE5 PE=2
SV=1
Length = 436
Score = 560 bits (1443), Expect = e-158, Method: Compositional matrix adjust.
Identities = 275/361 (76%), Positives = 311/361 (86%), Gaps = 3/361 (0%)
Query: 93 SSSFST---GGAEWEKQVRHSATPRRPNGMTVLVTGAAGFVGSHCSLALKKRGDGVLGLD 149
SSS S GG+ WEKQVR SA PR G+TVLVTGA+GFVG+H S+AL++RGDGVLGLD
Sbjct: 67 SSSISAAKYGGSHWEKQVRKSARPRSHGGLTVLVTGASGFVGTHVSIALRRRGDGVLGLD 126
Query: 150 NFNSYYDPSLKRARQKLLQKHQVFIVEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYA 209
NFN YYDP LKRARQ LL++ VF+VEGD+NDA LL KLFDVV FTHV+HLAAQAGVRYA
Sbjct: 127 NFNRYYDPKLKRARQGLLERSGVFVVEGDINDAVLLRKLFDVVLFTHVMHLAAQAGVRYA 186
Query: 210 MQNPQSYVASNIAGFVNLLEVCKSVNPQPSIVWASSSSVYGLNTQVPFSESHRTDQPASL 269
MQNP SYV SNIAGFVNLLEV KS NPQP+IVWASSSSVYGLN++VPFSE RTDQPASL
Sbjct: 187 MQNPGSYVNSNIAGFVNLLEVSKSANPQPAIVWASSSSVYGLNSKVPFSEKDRTDQPASL 246
Query: 270 YAATKKAGEEIAHTYNHIYGLALTGLRFFTVYGPWGRPDMAYFFFTKDILQGKTIDVYKT 329
YAATKKAGE IAHTYNHIYGL+LTGLRFFTVYGPWGRPDMAYFFFTKDIL+GKTI V+++
Sbjct: 247 YAATKKAGEGIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTKDILKGKTITVFES 306
Query: 330 QDDREVARDFTYIDDVVKGCVGALDTAGKSTGSGGKKRGPAQLRVYNLGNTSPVPVGRLV 389
D VARDFTYIDD+VKGC+GALDTA KSTGSGGKK+GPA R+YNLGNTSPVPV +LV
Sbjct: 307 PDKGSVARDFTYIDDIVKGCLGALDTAEKSTGSGGKKKGPAMFRIYNLGNTSPVPVTKLV 366
Query: 390 SILENLLNTKAKKHVIRMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKWYVSY 449
+ILE LL KAKK ++ +PRNGDV +THAN++LA + GYKP DL GL+KFVKWY+ +
Sbjct: 367 TILEKLLKMKAKKKIMPLPRNGDVEFTHANITLAQAELGYKPAVDLETGLKKFVKWYMGF 426
Query: 450 Y 450
Y
Sbjct: 427 Y 427
>sp|Q9M0B6|GAE1_ARATH UDP-glucuronate 4-epimerase 1 OS=Arabidopsis thaliana GN=GAE1 PE=1
SV=1
Length = 429
Score = 546 bits (1406), Expect = e-154, Method: Compositional matrix adjust.
Identities = 285/453 (62%), Positives = 339/453 (74%), Gaps = 36/453 (7%)
Query: 5 PDTSKTIKLERYNSYLRRLHVTKMLHSSSKLFFRATILIALVLILFFTLNHPPLSDNTGE 64
P T K++R N R+LH + S+S +F A LIAL
Sbjct: 10 PSTPGKFKIDRSN---RQLH--RCFASTSTMFLWALFLIALTA----------------- 47
Query: 65 SGDNNSNNKNNPRNLFTHQHSLLSSSFFSSSFSTGGAEWEKQVRHSATPRRPNGMTVLVT 124
+ + Q + S S + ++ S GG +WEKQVR SA R G++VLVT
Sbjct: 48 -------------SYLSFQSFVDSGSRYLTA-SWGGIQWEKQVRTSAQIHRSGGISVLVT 93
Query: 125 GAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGDLNDAPL 184
GA GFVGSH SLAL+KRGDGV+GLDNFN+YYDPSLKRAR+ LL +F+VEGDLNDA L
Sbjct: 94 GATGFVGSHVSLALRKRGDGVVGLDNFNNYYDPSLKRARRSLLSSRGIFVVEGDLNDAKL 153
Query: 185 LTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQPSIVWAS 244
L KLFDVV FTHV+HLAAQAGVRYA++NPQSYV SNIAG VNLLE+CK+ NPQP+IVWAS
Sbjct: 154 LAKLFDVVAFTHVMHLAAQAGVRYALENPQSYVHSNIAGLVNLLEICKAANPQPAIVWAS 213
Query: 245 SSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRFFTVYGPW 304
SSSVYGLN +VPFSES RTDQPASLYAATKKAGEEI HTYNHIYGLA+TGLRFFTVYGPW
Sbjct: 214 SSSVYGLNEKVPFSESDRTDQPASLYAATKKAGEEITHTYNHIYGLAITGLRFFTVYGPW 273
Query: 305 GRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGALDTAGKSTGSGG 364
GRPDMAYF FT++ILQGK I +Y+ ++ ++ARDFTYIDD+VKGC+G+LD++GKSTGSGG
Sbjct: 274 GRPDMAYFSFTRNILQGKPITIYRGKNRVDLARDFTYIDDIVKGCLGSLDSSGKSTGSGG 333
Query: 365 KKRGPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAKKHVIRMPRNGDVPYTHANVSLAY 424
KKRG A R++NLGNTSPV V LV ILE L KAK++ + MP NGDVP+THAN+S A
Sbjct: 334 KKRGAAPYRIFNLGNTSPVTVPILVDILEKHLKVKAKRNFVEMPGNGDVPFTHANISSAR 393
Query: 425 KDFGYKPTTDLAAGLRKFVKWYVSYYGIQPRVK 457
+FGYKPTTDL GL+KFV+WY+SYYG + K
Sbjct: 394 NEFGYKPTTDLETGLKKFVRWYLSYYGYNTKAK 426
>sp|P39858|CAPI_STAAU Protein CapI OS=Staphylococcus aureus GN=capI PE=3 SV=1
Length = 334
Score = 291 bits (746), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 159/338 (47%), Positives = 217/338 (64%), Gaps = 12/338 (3%)
Query: 119 MTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGD 178
M +L+TG AGF+GSH + L K+G V+G+D+ N YY SLK R K + K +
Sbjct: 1 MKILITGTAGFIGSHLAKKLIKQGHYVIGVDSINDYYSVSLKEDRLKSIGKENFTFNKVK 60
Query: 179 LNDAPLLTKLF-DVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQ 237
L + L+K+F D P V++LAAQAGVRY+++NP++Y+ SNI GF+N+LE + N Q
Sbjct: 61 LENYDDLSKVFVDEQPEV-VVNLAAQAGVRYSIENPRTYIDSNIVGFMNILECSRHFNIQ 119
Query: 238 PSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRF 297
++++ASSSSVYG NT PFS S D P SLYAATKK+ E +AHTY+H+Y L TGLRF
Sbjct: 120 -NLIYASSSSVYGANTSKPFSTSDNIDHPLSLYAATKKSNELMAHTYSHLYNLPTTGLRF 178
Query: 298 FTVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGALDT-A 356
FTVYGPWGRPDMA F FTK I+ + IDVY + + RDFTY+DD+V+ + A
Sbjct: 179 FTVYGPWGRPDMALFKFTKAIVNDQAIDVYNHGN---MMRDFTYVDDIVEAISRLVKKPA 235
Query: 357 GKSTGSGGKKRGP----AQLRVYNLGNTSPVPVGRLVSILENLLNTKAKKHVIRMPRNGD 412
+ G P A +VYN+GN SPV + V +EN L +A+K+ + + + GD
Sbjct: 236 SPNKEWSGADPDPGSSYAPYKVYNIGNNSPVRLMEFVEAIENKLGKEARKNYMDL-QPGD 294
Query: 413 VPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKWYVSYY 450
VP T+ANV ++D +KP T + G+ KFV WY+ YY
Sbjct: 295 VPETYANVDDLFRDIDFKPETTIQDGVNKFVDWYLEYY 332
>sp|Q04871|YCL2_ECO11 Uncharacterized 37.6 kDa protein in cld 5'region OS=Escherichia
coli O111:H- PE=3 SV=1
Length = 334
Score = 285 bits (728), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 155/339 (45%), Positives = 210/339 (61%), Gaps = 10/339 (2%)
Query: 119 MTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGD 178
M LVTGAAGF+G H S L + G V+G+DN N YYD SLK+AR +LL + + D
Sbjct: 1 MKYLVTGAAGFIGFHVSKRLLEAGHQVVGIDNLNDYYDVSLKQARLELLAQPGFQFHKID 60
Query: 179 LNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQP 238
L D +T LF F V + VRY+++NP +Y SN+ GF+N+LE C+ N
Sbjct: 61 LADREGMTDLFASGHFERVFISPHRLAVRYSLENPHAYADSNLTGFLNILEGCRH-NKIQ 119
Query: 239 SIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRFF 298
+++ASSSSVYGLN ++PFS D P SLYAATKKA E +AHTY+H+YGL TGLRFF
Sbjct: 120 HLLYASSSSVYGLNRKMPFSTDDSVDHPVSLYAATKKANELMAHTYSHLYGLPATGLRFF 179
Query: 299 TVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGALDTAGK 358
TVYGPWGRPDMA F FTK +L+GK+IDVY ++ RDFTYIDD+ + + D
Sbjct: 180 TVYGPWGRPDMALFKFTKAMLEGKSIDVYNYG---KMKRDFTYIDDIAEAIIRLQDVIPH 236
Query: 359 -----STGSGGKKRGPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAKKHVIRMPRNGDV 413
+ +G A RVYN+GN+SPV + + LE+ L +AKK+++ + + GDV
Sbjct: 237 ADTQWTVETGTPAASIAPYRVYNIGNSSPVELMDYIQALEDALGIEAKKNMLPL-QPGDV 295
Query: 414 PYTHANVSLAYKDFGYKPTTDLAAGLRKFVKWYVSYYGI 452
T A+ Y+ G+ P T + G++ FV WY +Y +
Sbjct: 296 LETSADTKALYEVIGFTPETTVKDGVKNFVNWYRDFYKV 334
>sp|Q58455|Y1055_METJA Uncharacterized protein MJ1055 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ1055 PE=3 SV=1
Length = 326
Score = 263 bits (673), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 140/332 (42%), Positives = 209/332 (62%), Gaps = 21/332 (6%)
Query: 120 TVLVTGAAGFVGSHCSLALKKRGDG--VLGLDNFNSYYDPSLKRARQKLLQKHQVF-IVE 176
+LVTG+AGF+G H S L + V+G+DN N+YY+P LK R ++L+ ++ + ++
Sbjct: 5 NILVTGSAGFIGFHLSKYLMDNYEDLKVIGIDNLNNYYNPVLKEKRNEILKNYENYTFIK 64
Query: 177 GDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNP 236
D +D L + ++HL AQAGVRY++QNP +Y+ SN G +N+ E + +
Sbjct: 65 LDFSDWDDLVENLKDKEIDLIVHLGAQAGVRYSLQNPWAYIKSNEMGTLNIFEFARRFDI 124
Query: 237 QPSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLR 296
+ +V+ASSSSVYG N ++PFSE R D+P SLYA+TK++ E +AH Y+H+YG+ + GLR
Sbjct: 125 E-KVVYASSSSVYGGNRKIPFSEDDRVDKPISLYASTKRSNELMAHVYHHLYGIKMIGLR 183
Query: 297 FFTVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGALDTA 356
FFTVYG +GRPDMAYF F K+IL GK I+VY + + RDFTYI DVV G + A+
Sbjct: 184 FFTVYGEYGRPDMAYFKFAKNILLGKEIEVYNYGN---MERDFTYISDVVDGILRAI--- 237
Query: 357 GKSTGSGGKKRGPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAKKHVIRMPRNGDVPYT 416
+ ++NLGN+ PV + + ++E LN KAKK + M ++GDV T
Sbjct: 238 ----------KKDFDYEIFNLGNSKPVKLMYFIELIEKYLNKKAKKKFLPM-QDGDVLRT 286
Query: 417 HANVSLAYKDFGYKPTTDLAAGLRKFVKWYVS 448
+A++S + K GYKP + GL++F W++
Sbjct: 287 YADLSKSEKLLGYKPKVTIEEGLKRFCNWFLE 318
>sp|O54067|LPSL_RHIME UDP-glucuronate 5'-epimerase OS=Rhizobium meliloti (strain 1021)
GN=lspL PE=3 SV=2
Length = 341
Score = 248 bits (633), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 134/339 (39%), Positives = 196/339 (57%), Gaps = 12/339 (3%)
Query: 119 MTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVF-IVEG 177
M L+TG AGF+G H + L G V+G D YYD +LK R +LQ+ F V
Sbjct: 1 MRYLITGTAGFIGFHVAKRLIDEGHFVVGFDGMTPYYDVTLKERRHAILQRSNGFKAVTA 60
Query: 178 DLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQ 237
L D L + ++ ++HLAAQAGVRY+++NP++YV +N+ G N+LE+ K++ P+
Sbjct: 61 MLEDRAALDRAAELAEPEVIIHLAAQAGVRYSLENPKAYVDANLVGSWNMLELAKAIAPK 120
Query: 238 PSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRF 297
++ AS+SS+YG N ++PF+E+ R D+P +LYAATKK+ E +AH+Y H+Y + T RF
Sbjct: 121 -HLMLASTSSIYGANEKIPFAEADRADEPMTLYAATKKSMELMAHSYAHLYKVPTTSFRF 179
Query: 298 FTVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGALDTAG 357
FTVYGPWGRPDMA F F I G+ ID+Y + ++RDFTYIDD+V+ V
Sbjct: 180 FTVYGPWGRPDMALFKFVDAIHNGRPIDIY---GEGRMSRDFTYIDDLVESIVRLSHVPP 236
Query: 358 KSTGSGGKKRGP------AQLRVYNLGNTSPVPVGRLVSILENLLNTKAKKHVIRMPRNG 411
++ A RV N G PV + V +E + A +++ M + G
Sbjct: 237 SEENRVAPEKATDTLSRHAPFRVVNTGGGQPVELMTFVETVEKAVGRPAIHNMLPM-QQG 295
Query: 412 DVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKWYVSYY 450
DVP T A+ L G+KP+ + G+ +FV+WY Y
Sbjct: 296 DVPRTFASPDLLEALTGFKPSVSVEEGVARFVEWYDQNY 334
>sp|O34886|YTCB_BACSU Uncharacterized UDP-glucose epimerase YtcB OS=Bacillus subtilis
(strain 168) GN=ytcB PE=3 SV=1
Length = 316
Score = 153 bits (386), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 124/337 (36%), Positives = 168/337 (49%), Gaps = 29/337 (8%)
Query: 119 MTVLVTGAAGFVGSH-CSLALKKRGDGVLGLDNF--NSYYDPSLKRARQKLLQKHQVFIV 175
M +LVTGAAGF+GSH C LK + V+G+D+F + + LK + L +K FI
Sbjct: 1 MKILVTGAAGFIGSHLCEELLKDKKHNVIGIDDFIGPTPFSLKLKNLKNLLPEKRFTFIK 60
Query: 176 EGDLN-DAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNP-QSYVASNIAGFVNLLEVCKS 233
E L D L + DV+ HLAA GVR + N Y A NI LLE C+
Sbjct: 61 ENLLTADLASLLEGVDVI-----FHLAAIPGVRSSWGNHFHPYAAHNIQALQRLLEACRE 115
Query: 234 VNPQPSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALT 293
+ Q + V+AS+SSVYG Q SE+ + P S Y TK GE++ H Y +G+ +
Sbjct: 116 HSIQ-TFVFASTSSVYG-EKQGKVSEN-TSLSPLSPYGVTKLTGEKLCHVYKQSFGIPIV 172
Query: 294 GLRFFTVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGAL 353
LRFFTVYGP RPDMA+ K LQ K + ++ D + +RDFTYI D VKG L
Sbjct: 173 ILRFFTVYGPRQRPDMAFHRLIKQHLQQKPLTIF---GDGQQSRDFTYISDCVKGITAVL 229
Query: 354 DTAGKSTGSGGKKRGPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAKKHVIRMPRNGDV 413
GK G N+G V ++VS++E++ KA H G+
Sbjct: 230 ---GKPHLIG---------ETVNIGGAERASVLKVVSLIEDISGRKATLH-FSDKIAGEP 276
Query: 414 PYTHANVSLAYKDFGYKPTTDLAAGLRKFVKWYVSYY 450
T A++S A + Y P T L GL + + S Y
Sbjct: 277 SNTWADISKAKQLLHYDPATSLKDGLTNEIAYLSSLY 313
>sp|Q04973|VIPB_SALTI Vi polysaccharide biosynthesis protein VipB/TviC OS=Salmonella
typhi GN=vipB PE=3 SV=1
Length = 348
Score = 119 bits (298), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 158/334 (47%), Gaps = 22/334 (6%)
Query: 122 LVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKH--QVFIVEGDL 179
L+TG AGF+GS L V+GLDNF++ Y +L R + ++ + ++GD+
Sbjct: 19 LITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDI 78
Query: 180 NDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQPS 239
K V + VLH AA V ++++P + ++NI GF+N+L + + S
Sbjct: 79 RKFTDCQKACKNVDY--VLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVS-S 135
Query: 240 IVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRFFT 299
+A+SSS YG + +P E R +P S YA TK E A + Y GLR+F
Sbjct: 136 FTYAASSSTYGDHPDLPKIE-ERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFN 194
Query: 300 VYGPWGRPDMAY-FFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGALDTAGK 358
V+G P+ AY + IL + D +RDF YI++V++ + + T
Sbjct: 195 VFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDL 254
Query: 359 STGSGGKKRGPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAKKHVIRMP-----RNGDV 413
++ + +VYN+ + L ++ + LN + P R+GDV
Sbjct: 255 ASKN----------KVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGDV 304
Query: 414 PYTHANVSLAYKDFGYKPTTDLAAGLRKFVKWYV 447
++ A+++ Y+P D+ GL++ +KWY+
Sbjct: 305 KHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYI 338
>sp|Q57664|GALE_METJA Putative UDP-glucose 4-epimerase OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0211 PE=3 SV=1
Length = 305
Score = 116 bits (291), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 150/329 (45%), Gaps = 36/329 (10%)
Query: 121 VLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGDLN 180
+LVTG AGF+GSH L + V+ LDN L + + F V D+
Sbjct: 2 ILVTGGAGFIGSHIVDKLIENNYDVIILDN--------LTTGNKNNINPKAEF-VNADIR 52
Query: 181 DAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQPSI 240
D L K+ + V+H AAQ VR +++NP N+ G +N+LE+ + + +
Sbjct: 53 DKDLDEKI-NFKDVEVVIHQAAQINVRNSVENPVYDGDINVLGTINILEMMRKYDIDKIV 111
Query: 241 VWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRFFTV 300
+S +VYG +P E+H + P S Y +K GEE YN +YG+ LR+ V
Sbjct: 112 FASSGGAVYGEPNYLPVDENHPIN-PLSPYGLSKYVGEEYIKLYNRLYGIEYAILRYSNV 170
Query: 301 YG----PWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGALDTA 356
YG P G + F K +L+ ++ ++ D RDF Y+ DV K + AL+
Sbjct: 171 YGERQDPKGEAGVISIFIDK-MLKNQSPIIFG---DGNQTRDFVYVGDVAKANLMALNWK 226
Query: 357 GKSTGSGGKKRGPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAKKHVIRMPRNGDVPYT 416
+ + N+G V L I+++ + + + + PR G+V
Sbjct: 227 NE---------------IVNIGTGKETSVNELFDIIKHEIGFRGEA-IYDKPREGEVYRI 270
Query: 417 HANVSLAYKDFGYKPTTDLAAGLRKFVKW 445
+ ++ A + G+KP DL G+++ V W
Sbjct: 271 YLDIKKA-ESLGWKPEIDLKEGIKRVVNW 298
>sp|Q6MWV3|GALE_MYCTU UDP-glucose 4-epimerase OS=Mycobacterium tuberculosis GN=galE1 PE=3
SV=1
Length = 314
Score = 110 bits (275), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/331 (30%), Positives = 145/331 (43%), Gaps = 26/331 (7%)
Query: 119 MTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGD 178
M LVTGAAGF+GS L G V+GLDNF + +L + L VE D
Sbjct: 1 MRALVTGAAGFIGSTLVDRLLADGHSVVGLDNFATGRATNL----EHLADNSAHVFVEAD 56
Query: 179 LNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQP 238
+ A L L P V HLAAQ VR ++ +PQ A N+ G V L E + +
Sbjct: 57 IVTADLHAILEQHRPEV-VFHLAAQIDVRRSVADPQFDAAVNVIGTVRLAEAARQTGVRK 115
Query: 239 SIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRFF 298
+ +S S+YG + P E+ TD PAS YAA K AGE +T+ H+YGL + +
Sbjct: 116 IVHTSSGGSIYGTPPEYPTPETAPTD-PASPYAAGKVAGEIYLNTFRHLYGLDCSHIAPA 174
Query: 299 TVYGPWGRPD---MAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGALDT 355
VYGP P F + +L GK V+ D T D V
Sbjct: 175 NVYGPRQDPHGEAGVVAIFAQALLSGKPTRVFG---------DGTNTRDYVFVDDVVDAF 225
Query: 356 AGKSTGSGGKKRGPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAKKHVIRMPRNGDVPY 415
S GG R +N+G +L S + + PR GD+
Sbjct: 226 VRVSADVGGGLR-------FNIGTGKETSDRQLHSAVAAAVGGPDDPE-FHPPRLGDLKR 277
Query: 416 THANVSLAYKDFGYKPTTDLAAGLRKFVKWY 446
+ ++ LA + G++P +LA G+R+ V+++
Sbjct: 278 SCLDIGLAERVLGWRPQIELADGVRRTVEYF 308
>sp|Q5R8D0|GALE_PONAB UDP-glucose 4-epimerase OS=Pongo abelii GN=GALE PE=2 SV=1
Length = 348
Score = 110 bits (274), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 162/353 (45%), Gaps = 49/353 (13%)
Query: 121 VLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYD------PSLKRARQKLLQKHQVFI 174
VLVTG AG++GSH L L + G + +DNF++ + SL+R ++ L V
Sbjct: 5 VLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQE--LTGRSVEF 62
Query: 175 VEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSV 234
E D+ D L +LF F V+H A V ++Q P Y N+ G + LLE+ K+
Sbjct: 63 EEMDILDQGALQRLFKKHSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAH 122
Query: 235 NPQPSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAH-------TYNHI 287
+ ++V++SS++VYG +P E+H T + Y +K EE+ T+N +
Sbjct: 123 GVK-NLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAV 181
Query: 288 YGLALTGLRFFTVYG----------PWGRPDMAYFFFTK-DILQGKTIDV----YKTQDD 332
LR+F G P G P+ + ++ I + + ++V Y T+D
Sbjct: 182 L------LRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDG 235
Query: 333 REVARDFTYIDDVVKGCVGALDTAGKSTGSGGKKRGPAQLRVYNLGNTSPVPVGRLVSIL 392
V RD+ ++ D+ KG + AL + G R+YNLG + V ++V +
Sbjct: 236 TGV-RDYIHVVDLAKGHIAALRKLKEQCGC----------RIYNLGTGTGYSVLQMVQAM 284
Query: 393 ENLLNTKAKKHVIRMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKW 445
E K V+ R GDV +AN SLA+++ G+ L +W
Sbjct: 285 EKASGKKIPYKVVAR-REGDVAACYANPSLAHEELGWTAALGLDRMCEDLWRW 336
>sp|Q14376|GALE_HUMAN UDP-glucose 4-epimerase OS=Homo sapiens GN=GALE PE=1 SV=2
Length = 348
Score = 109 bits (272), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 161/353 (45%), Gaps = 49/353 (13%)
Query: 121 VLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYD------PSLKRARQKLLQKHQVFI 174
VLVTG AG++GSH L L + G + +DNF++ + SL+R ++ L V
Sbjct: 5 VLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQE--LTGRSVEF 62
Query: 175 VEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSV 234
E D+ D L +LF F V+H A V ++Q P Y N+ G + LLE+ K+
Sbjct: 63 EEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKA- 121
Query: 235 NPQPSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAH-------TYNHI 287
+ ++V++SS++VYG +P E+H T + Y +K EE+ T+N +
Sbjct: 122 HGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAV 181
Query: 288 YGLALTGLRFFTVYG----------PWGRPDMAYFFFTK-DILQGKTIDV----YKTQDD 332
LR+F G P G P+ + ++ I + + ++V Y T+D
Sbjct: 182 L------LRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDG 235
Query: 333 REVARDFTYIDDVVKGCVGALDTAGKSTGSGGKKRGPAQLRVYNLGNTSPVPVGRLVSIL 392
V RD+ ++ D+ KG + AL + G R+YNLG + V ++V +
Sbjct: 236 TGV-RDYIHVVDLAKGHIAALRKLKEQCGC----------RIYNLGTGTGYSVLQMVQAM 284
Query: 393 ENLLNTKAKKHVIRMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKW 445
E K V+ R GDV +AN SLA ++ G+ L +W
Sbjct: 285 EKASGKKIPYKVVAR-REGDVAACYANPSLAQEELGWTAALGLDRMCEDLWRW 336
>sp|P35673|GALE_ERWAM UDP-glucose 4-epimerase OS=Erwinia amylovora GN=galE PE=3 SV=1
Length = 337
Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 152/343 (44%), Gaps = 31/343 (9%)
Query: 119 MTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGD 178
M++LVTG AG++GSH L+L +RGD V+ LDN ++ S+ R +KL K F EGD
Sbjct: 1 MSILVTGGAGYIGSHTVLSLLQRGDDVVILDNLSNASRESINRV-EKLTGKTATFF-EGD 58
Query: 179 LNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQP 238
L D L +F + V+H A V + + P Y +N+ G + LLE +S
Sbjct: 59 LLDRSCLRSVFSAHRISAVIHFAGLKAVGASTRKPLEYYQNNVTGTLVLLEEMRSAGVN- 117
Query: 239 SIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIY-GLALTGLRF 297
+++SS++VYG + VP+ E+ S Y +K E+I Y LR+
Sbjct: 118 QFIFSSSATVYGADAPVPYVETTPIGGTTSPYGTSKLMVEQILRDYAKANPEFKTIALRY 177
Query: 298 FTVYG----------PWGRPDMAYFFFTKDILQ-----GKTIDVYKTQDDREVARDFTYI 342
F G P G P+ + + + G D Y T+D V RD+ ++
Sbjct: 178 FNPVGAHESGQMGEDPNGIPNNLLPYIAQVAIGRLEKLGIFGDDYPTEDGTGV-RDYIHV 236
Query: 343 DDVVKGCVGALDTAGKSTGSGGKKRGPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAKK 402
D+ +G + ALD G + YNLG V +V E +
Sbjct: 237 MDLAEGHLKALDHLSAIEG----------YKAYNLGAGKGYSVLEMVKAFEK-ASGGTVA 285
Query: 403 HVIRMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKW 445
+ I R+GD+ A+ +LA K+ ++ + + +R W
Sbjct: 286 YQISPRRDGDLAAFWADATLADKELNWRVSRGIDEMMRDTWNW 328
>sp|Q8R059|GALE_MOUSE UDP-glucose 4-epimerase OS=Mus musculus GN=Gale PE=2 SV=1
Length = 347
Score = 105 bits (263), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 155/353 (43%), Gaps = 49/353 (13%)
Query: 121 VLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYD------PSLKRARQKLLQKHQVFI 174
VLVTG AG++GSH L L + G + +DNF++ SL+R ++ L V
Sbjct: 4 VLVTGGAGYIGSHTVLELLEAGYSPVVIDNFHNAIRGEDSMPESLRRVQE--LTGRSVEF 61
Query: 175 VEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSV 234
E D+ D L LF F V+H A V ++Q P Y N+ G + LLE+ ++
Sbjct: 62 EEMDILDQAALQHLFKKHSFKAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMRA- 120
Query: 235 NPQPSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAH-------TYNHI 287
+ ++V++SS++VYG +P E+H T + Y +K EE+ +N +
Sbjct: 121 HGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCRADTAWNAV 180
Query: 288 YGLALTGLRFFTVYG----------PWGRPDMAYFFFTKDILQGKTI-----DVYKTQDD 332
LR+F G P G P+ + ++ + + D Y T+D
Sbjct: 181 L------LRYFNPIGAHASGRIGEDPQGIPNNLMPYVSQVAIGRREALNVFGDDYATEDG 234
Query: 333 REVARDFTYIDDVVKGCVGALDTAGKSTGSGGKKRGPAQLRVYNLGNTSPVPVGRLVSIL 392
V RD+ ++ D+ KG + AL + G R YNLG + V ++V +
Sbjct: 235 TGV-RDYIHVVDLAKGHIAALKKLKEQCGC----------RTYNLGTGTGYSVLQMVQAM 283
Query: 393 ENLLNTKAKKHVIRMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKW 445
E K V+ R GDV +AN SLA+++ G+ L +W
Sbjct: 284 EKASGKKIPYKVVAR-REGDVAACYANPSLAHEELGWTAALGLDRMCEDLWRW 335
>sp|P24325|GALE_HAEIN UDP-glucose 4-epimerase OS=Haemophilus influenzae (strain ATCC
51907 / DSM 11121 / KW20 / Rd) GN=galE PE=3 SV=2
Length = 338
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/345 (28%), Positives = 156/345 (45%), Gaps = 35/345 (10%)
Query: 119 MTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGD 178
M +LVTG AG++GSH + L G V+ LDN + SL+R +Q ++ + + EGD
Sbjct: 1 MAILVTGGAGYIGSHTVVELLNVGKEVVVLDNLCNSSPKSLERVKQITGKEAKFY--EGD 58
Query: 179 LNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQP 238
+ D LL K+F V+H A V ++Q P Y +N+AG + L++ K
Sbjct: 59 ILDRALLQKIFAENEINSVIHFAGLKAVGESVQKPTEYYMNNVAGTLVLIQEMKKAGVW- 117
Query: 239 SIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAH-TYNHIYGLALTGLRF 297
+ V++SS++VYG +P +E + Y +K E+I T ++T LR+
Sbjct: 118 NFVFSSSATVYGDPKIIPITEDCEVGGTTNPYGTSKYMVEQILRDTAKAEPKFSMTILRY 177
Query: 298 FTVYG----------PWGRPDMAYFFFTKDILQGKTIDV------YKTQDDREVARDFTY 341
F G P G P+ + ++ + GK + Y T D V RD+ +
Sbjct: 178 FNPVGAHESGLIGEDPNGIPNNLLPYISQ-VAIGKLAQLSVFGSDYDTHDGTGV-RDYIH 235
Query: 342 IDDVVKGCVGALDTAGKSTGSGGKKRGPAQLRVYNLGNTSPVPVGRLVSILENLLN-TKA 400
+ D+ G + AL + A L +YNLG V +V E N T A
Sbjct: 236 VVDLAVGHLKALQ----------RHENDAGLHIYNLGTGHGYSVLDMVKAFEKANNITIA 285
Query: 401 KKHVIRMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKW 445
K V R R+GD+ +++ SLA K+ G+ L ++ W
Sbjct: 286 YKLVER--RSGDIATCYSDPSLAAKELGWVAERGLEKMMQDTWNW 328
>sp|O06485|YFNG_BACSU Putative sugar dehydratase/epimerase YfnG OS=Bacillus subtilis
(strain 168) GN=yfnG PE=3 SV=2
Length = 322
Score = 103 bits (256), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 145/339 (42%), Gaps = 36/339 (10%)
Query: 121 VLVTGAAGFVGSHCSLALKKRGDGVLGL--DNF---NSYYDPSLKRARQKLLQKHQVFIV 175
V VTG G +GS+ L ++G V GL D+ N Y +K+ IV
Sbjct: 9 VFVTGCTGLLGSYLVKELIEQGANVTGLVRDHVPQSNLYQGEHIKKMN----------IV 58
Query: 176 EGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVN 235
G L D ++ + V HLAAQA V A +NP S +NI G N+LE C+
Sbjct: 59 RGSLEDLAVIERALGEYEIDTVFHLAAQAIVGVANRNPISTFEANILGTWNILEACRKHP 118
Query: 236 PQPSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGL 295
++ ASS YG +P+ E+ Q Y +K + I+HTY H YGL +
Sbjct: 119 LIKRVIVASSDKAYGDQENLPYDENMPL-QGKHPYDVSKSCADLISHTYFHTYGLPVCIT 177
Query: 296 RFFTVYGPWGRPDMAYFFFTKD----ILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVG 351
R +YG D+ + +L G+ ++ + D RD+ YI+D V+ +
Sbjct: 178 RCGNLYGG---GDLNFNRIIPQTIQLVLNGEAPEI---RSDGTFVRDYFYIEDAVQAYLL 231
Query: 352 ALDTAGKSTGSGGKKRGPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAKKHVIRMPRNG 411
+ ++ +G +N N + V LV + +N+ K V+ N
Sbjct: 232 LAEKMEENNLAG---------EAFNFSNEIQLTVLELVEKILKKMNSNLKPKVLNQGSN- 281
Query: 412 DVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKWYVSYY 450
++ + + + A K + P + GL K ++WY ++
Sbjct: 282 EIKHQYLSAEKARKLLNWTPAYTIDEGLEKTIEWYTEFF 320
>sp|Q9CNY5|GALE_PASMU UDP-glucose 4-epimerase OS=Pasteurella multocida (strain Pm70)
GN=galE PE=3 SV=1
Length = 338
Score = 102 bits (254), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 154/345 (44%), Gaps = 35/345 (10%)
Query: 119 MTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGD 178
M +LVTG AG++GSH + L V+ LDN + SL+R Q + QV +GD
Sbjct: 1 MAILVTGGAGYIGSHTVVELLNANKDVVVLDNLCNSSPKSLERVAQ--ITGKQVKFYQGD 58
Query: 179 LNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQP 238
+ D LL K+F V+H A V ++Q P Y +N+ G + L++ K
Sbjct: 59 ILDTALLQKIFAENQIQSVIHFAGLKAVGESVQKPAEYYMNNVTGSLVLIQEMKKAGVW- 117
Query: 239 SIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIY-GLALTGLRF 297
+ V++SS++VYG +P +ES + + Y +K E+I ++T LR+
Sbjct: 118 NFVFSSSATVYGDPEIIPITESCKVGGTTNPYGTSKFMVEQILKDIAKATPEFSITILRY 177
Query: 298 FTVYG----------PWGRPDMAYFFFTKDILQGKTIDV------YKTQDDREVARDFTY 341
F G P G P+ + ++ + GK + Y+T D V RD+ +
Sbjct: 178 FNPVGAHESGLIGEDPNGIPNNLLPYISQ-VAIGKLPQLSVFGSDYETHDGTGV-RDYIH 235
Query: 342 IDDVVKGCVGALDTAGKSTGSGGKKRGPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAK 401
+ D+ G + ALD + G A L +YNLG S V +V E + + K
Sbjct: 236 VVDLAIGHLKALD----------RHEGDAGLHIYNLGTGSGYSVLDMVKAFEKVNDIKIP 285
Query: 402 -KHVIRMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKW 445
K V R P GD+ +++ SLA + + L ++ W
Sbjct: 286 YKLVDRRP--GDIATCYSDPSLAKTELNWTAARGLEQMMKDTWHW 328
>sp|Q9T0A7|GALE3_ARATH UDP-glucose 4-epimerase 3 OS=Arabidopsis thaliana GN=At4g23920 PE=2
SV=1
Length = 350
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 101/354 (28%), Positives = 156/354 (44%), Gaps = 52/354 (14%)
Query: 120 TVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQ------KLLQKHQVF 173
+VLVTG AG++GSH L L + G + +DN+++ SL+R ++ L HQV
Sbjct: 4 SVLVTGGAGYIGSHTVLQLLEGGYSAVVVDNYDNSSAASLQRVKKLAGENGNRLSFHQV- 62
Query: 174 IVEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKS 233
DL D P L K+F F V+H A V +++ P Y +NI G V LLEV
Sbjct: 63 ----DLRDRPALEKIFSETKFDAVIHFAGLKAVGESVEKPLLYYNNNIVGTVTLLEVMAQ 118
Query: 234 VNPQPSIVWASSSSVYGLNTQVPFSESHRTDQPASL---YAATKKAGEEIA---HTYNHI 287
+ ++V++SS++VYG +VP +E + P S Y TK EEI H +
Sbjct: 119 YGCK-NLVFSSSATVYGWPKEVPCTE----ESPISATNPYGRTKLFIEEICRDVHRSDSE 173
Query: 288 YGLALTGLRFFTVYG----------PWGRPDMAYFFFTKDILQGKTIDV------YKTQD 331
+ + L LR+F G P G P+ + + + G+ + YKT+D
Sbjct: 174 WKIIL--LRYFNPVGAHPSGYIGEDPLGVPN-NLMPYVQQVAVGRRPHLTVFGTDYKTKD 230
Query: 332 DREVARDFTYIDDVVKGCVGALDTAGKSTGSGGKKRGPAQLRVYNLGNTSPVPVGRLVSI 391
V RD+ ++ D+ G + AL S VYNLG + V +V+
Sbjct: 231 GTGV-RDYIHVMDLADGHIAALRKLDDLKIS---------CEVYNLGTGNGTSVLEMVAA 280
Query: 392 LENLLNTKAKKHVIRMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKW 445
E + K V+ R GD +A+ A ++ +K + R W
Sbjct: 281 FEK-ASGKKIPLVMAGRRPGDAEVVYASTEKAERELNWKAKNGIEEMCRDLWNW 333
>sp|Q43070|GALE1_PEA UDP-glucose 4-epimerase OS=Pisum sativum GN=GALE PE=2 SV=1
Length = 350
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 98/349 (28%), Positives = 159/349 (45%), Gaps = 42/349 (12%)
Query: 121 VLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKL---LQKHQVFIVEG 177
+LVTG+AGF+G+H + L G V +DNF++ +++R R+ + L ++ F + G
Sbjct: 8 ILVTGSAGFIGTHTVVQLLNNGFNVSIIDNFDNSVMEAVERVREVVGSNLSQNLEFTL-G 66
Query: 178 DLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQ 237
DL + L KLF F V+H A V +++NP+ Y +N+ G +NL EV N +
Sbjct: 67 DLRNKDDLEKLFSKSKFDAVIHFAGLKAVGESVENPRRYFDNNLVGTINLYEVMAKHNCK 126
Query: 238 PSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIY-GLALTGLR 296
+V++SS++VYG ++P E + Q + Y TK EEIA + LR
Sbjct: 127 -KMVFSSSATVYGQPEKIPCVEDFKL-QAMNPYGRTKLFLEEIARDIQKAEPEWRIVLLR 184
Query: 297 FFTVYG----------PWGRPD--MAYFFFTKDILQGKTIDV------YKTQDDREVARD 338
+F G P G P+ M Y + + G+ ++ Y T+D + RD
Sbjct: 185 YFNPVGAHESGKLGEDPRGIPNNLMPYI---QQVAVGRLPELNVYGHDYPTRDGSAI-RD 240
Query: 339 FTYIDDVVKGCVGALDTAGKSTGSGGKKRGPAQLRVYNLGNTSPVPVGRLVSILENLLNT 398
+ ++ D+ G + AL S G YNLG V +V+ E
Sbjct: 241 YIHVMDLADGHIAALRKLFTSENIG--------CTAYNLGTGRGSSVLEMVAAFE---KA 289
Query: 399 KAKKHVIRM-PRN-GDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKW 445
KK +++ PR GD +A+ + A K+ G+K + R W
Sbjct: 290 SGKKIALKLCPRRPGDATEVYASTAKAEKELGWKAKYGVEEMCRDQWNW 338
>sp|Q9HDU3|GAL10_SCHPO Bifunctional protein gal10 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=gal10 PE=3 SV=1
Length = 713
Score = 100 bits (248), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 102/368 (27%), Positives = 160/368 (43%), Gaps = 39/368 (10%)
Query: 121 VLVTGAAGFVGSHCSLALKKRGDGVLGLDNF-NSYYDPSLKRARQKLLQKHQVFIVEGDL 179
+LVTG AG++GSH + L G V+ +DN NS YD AR + + + + + DL
Sbjct: 8 ILVTGGAGYIGSHTVIELINHGYKVIIVDNLCNSCYDAV---ARVEFIVRKSIKFFKLDL 64
Query: 180 NDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQPS 239
D L ++FD V+H AA V +M+ P Y +NI G + LL V + + +
Sbjct: 65 RDKEGLAQIFDTFKIKGVIHFAALKAVGESMKLPLEYYDNNICGTITLLNVMRE-HRVKT 123
Query: 240 IVWASSSSVYG----LNTQVPFSESHRTDQPASLYAATKKAGEEIA---HTYNHIYGLAL 292
+V++SS++VYG + +P ES D P + Y TK A E I HT ++ + A+
Sbjct: 124 VVFSSSATVYGDATRFDNMIPIPESCPND-PTNPYGKTKYAIENIIKDLHTSDNTWRGAI 182
Query: 293 TGLRFFTVYG----------PWGRPDMAYFFFTKDILQGKTI-----DVYKTQDDREVAR 337
LR+F G P G P+ F + + + D Y + D + R
Sbjct: 183 --LRYFNPIGAHPSGLLGEDPLGIPNNLLPFLAQVAIGRREKLLVFGDDYDSHDGTPI-R 239
Query: 338 DFTYIDDVVKGCVGALDTAGKSTGSGGKKRGPAQLRVYNLGNTSPVPVGRLVSILENLLN 397
D+ ++ D+ KG + AL+ K S G R +NLG V + +
Sbjct: 240 DYIHVVDLAKGHIAALNYLNKINNSEG------MYREWNLGTGKGSSVFDIYHAFCKEVG 293
Query: 398 TKAKKHVIRMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKWYVSY-YGIQPRV 456
V+ R GDV A+ + A + +K + R KW + +G Q
Sbjct: 294 KDLPYEVVGR-RTGDVLNLTASPNRANSELKWKAELSITDACRDLWKWTIENPFGFQIDN 352
Query: 457 KKENGFST 464
K F+T
Sbjct: 353 YKWKLFNT 360
>sp|P09609|GAL10_KLULA Bifunctional protein GAL10 OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=GAL10 PE=2 SV=2
Length = 688
Score = 99.8 bits (247), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 98/348 (28%), Positives = 155/348 (44%), Gaps = 41/348 (11%)
Query: 121 VLVTGAAGFVGSHCSLALKKRGDGVLGLDNF-NSYYDPSLKRARQKLLQKHQVFIVEGDL 179
LVTG AG++GSH + L + G + +DN NS Y+ AR +LL ++ + DL
Sbjct: 7 CLVTGGAGYIGSHTVVELCEAGYKCIVVDNLSNSSYE---SVARMELLTGQEIKFAKIDL 63
Query: 180 NDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQPS 239
+ L KLFD VLH A V + Q P +Y +NI G +NLLE KS + +
Sbjct: 64 CELEPLNKLFDDYKIDSVLHFAGLKAVGESTQIPLTYYFNNIVGTINLLECMKSHDVK-K 122
Query: 240 IVWASSSSVYGLNTQ----VPFSESHRTDQPASLYAATKKAGEEIA---HTYNHIYGLAL 292
+V++SS++VYG T+ +P E+ T P + Y TK E++ H + + A+
Sbjct: 123 LVFSSSATVYGDATRFENMIPIPETCPT-GPTNPYGKTKLTIEDMMRDLHFSDKSFSFAI 181
Query: 293 TGLRFFTVYG----------PWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVA-----R 337
LR+F G P G P+ F + + G+ +Y DD + R
Sbjct: 182 --LRYFNPIGAHPSGVIGEDPLGIPNNLLPFMAQ-VAIGRRPKLYVFGDDYDSVDGTPIR 238
Query: 338 DFTYIDDVVKGCVGALDTAGKSTGSGGKKRGPAQLRVYNLGNTSPVPVGRLVSILENLLN 397
D+ ++ D+ KG + AL K G+ R +NLG V ++ + +
Sbjct: 239 DYIHVVDLAKGHLAALKYLEKYAGT---------CREWNLGTGHGTTVLQMYRAFCDAIG 289
Query: 398 TKAKKHVIRMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKW 445
++V+ R+GDV A A + +K D+ KW
Sbjct: 290 FNF-EYVVTARRDGDVLNLTAKCDRATNELEWKTELDVNKACVDLWKW 336
>sp|Q57301|GALE_YEREN UDP-glucose 4-epimerase OS=Yersinia enterocolitica GN=galE PE=3
SV=1
Length = 336
Score = 99.4 bits (246), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 151/344 (43%), Gaps = 35/344 (10%)
Query: 119 MTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGD 178
M++L+TG AG++GSH L L ++G V+ LDN + SL R + +K + GD
Sbjct: 1 MSILITGGAGYIGSHTVLTLLEQGRNVVVLDNLINSSAESLARVSKICGRKPNFY--HGD 58
Query: 179 LNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQP 238
+ D L +F V+H A V +++ P Y +N+ G + LLE N +
Sbjct: 59 ILDRSCLKLIFSSHKIDSVIHFAGLKSVGESVEKPIEYYQNNVVGSITLLEEMCLANVK- 117
Query: 239 SIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIY-GLALTGLRF 297
++++SS++VYG VP +E R + Y +K E+I ++ + ++T LR+
Sbjct: 118 KLIFSSSATVYGEPEFVPLTEKARIGGTTNPYGTSKVMVEQILKDFSLAHPDYSITALRY 177
Query: 298 FTVYG----------PWGRPDMAYFFFTKDILQGKTIDV------YKTQDDREVARDFTY 341
F G P G+P+ F T+ + GK + Y T D + RD+ +
Sbjct: 178 FNPVGAHPSGLIGEDPNGKPNNLLPFITQ-VAIGKLSKLLVYGNDYDTPDGSGI-RDYIH 235
Query: 342 IDDVVKGCVGALDTAGKSTGSGGKKRGPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAK 401
+ D+ +G + L + R+YNLG V ++ E +
Sbjct: 236 VMDLAEGHLSTLINL------------TSGFRIYNLGTGVGYSVLHMIKEFERITGKNIP 283
Query: 402 KHVIRMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKW 445
++ R GD+ A+ LA+ + G+ L L+ KW
Sbjct: 284 FDIVSR-RPGDIAECWASPELAHLELGWYAKRTLVDMLQDAWKW 326
>sp|P18645|GALE_RAT UDP-glucose 4-epimerase OS=Rattus norvegicus GN=Gale PE=2 SV=1
Length = 347
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 157/357 (43%), Gaps = 58/357 (16%)
Query: 121 VLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYD------PSLKRARQKLLQKHQVFI 174
VLVTG AG++GSH L L + G + +DNF++ SL+R ++ L V
Sbjct: 5 VLVTGGAGYIGSHTVLELLEAGYSPVVIDNFHNSIRGEDSMPESLRRVQE--LTGRSVEF 62
Query: 175 VEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSV 234
E D+ D L LF F V+H A V ++Q P Y N+ G + LLE+ +++
Sbjct: 63 EEMDILDQAALQHLFKKHNFKAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMRAM 122
Query: 235 NPQPSIVWASSSSVYGLNTQVPFSES---HR-TDQPASLYAATKKAGEEIAH-------T 283
+ S+V++SS++VYG VP S HR +P Y +K EE+
Sbjct: 123 GVK-SLVFSSSATVYG--KPVPASGRGPPHRGCTKP---YGKSKFFIEEMIQDLCRADTA 176
Query: 284 YNHIYGLALTGLRFFTVYG----------PWGRPDMAYFFFTKDILQGKTI-----DVYK 328
+N + LR+F G P G P+ + ++ + + D Y
Sbjct: 177 WNAVL------LRYFIPIGAHRSARIGEDPQGIPNNLMPYVSQVAIGRREALNVFGDDYA 230
Query: 329 TQDDREVARDFTYIDDVVKGCVGALDTAGKSTGSGGKKRGPAQLRVYNLGNTSPVPVGRL 388
T+D V RD+ ++ D+ KG + AL + G R+YNLG + V ++
Sbjct: 231 TEDGTGV-RDYIHVVDLAKGHIAALKKLKEQCGC----------RIYNLGTGTGYSVLQM 279
Query: 389 VSILENLLNTKAKKHVIRMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKW 445
V +E K V+ R GDV +AN SLA+++ G+ L +W
Sbjct: 280 VQAMEKASGKKIPYKVVAR-REGDVAACYANPSLAHEELGWTAALGLDRMCEDLWRW 335
>sp|P09147|GALE_ECOLI UDP-glucose 4-epimerase OS=Escherichia coli (strain K12) GN=galE
PE=1 SV=1
Length = 338
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 158/350 (45%), Gaps = 45/350 (12%)
Query: 119 MTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNF-NSYYDPSLKRARQKLLQKHQVFIVEG 177
M VLVTG +G++GSH + L + G V+ LDN NS S+ ++L KH F VEG
Sbjct: 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKR--SVLPVIERLGGKHPTF-VEG 57
Query: 178 DLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQ 237
D+ + L+T++ V+H A V ++Q P Y +N+ G + L+ ++ N +
Sbjct: 58 DIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVK 117
Query: 238 PSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHI---YGLALTG 294
+ +++SS++VYG ++P+ ES T P S Y +K E+I + +AL
Sbjct: 118 -NFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIAL-- 174
Query: 295 LRFFTVYG----------PWGRPDMAYFFFTKDILQGKTIDV------YKTQDDREVARD 338
LR+F G P G P+ + + + G+ + Y T+D V RD
Sbjct: 175 LRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQ-VAVGRRDSLAIFGNDYPTEDGTGV-RD 232
Query: 339 FTYIDDVVKGCVGALDTAGKSTGSGGKKRGPAQLRVYNLGNTSPVPVGRLVSILENLLNT 398
+ ++ D+ G V A++ G + +YNLG VG V + N +
Sbjct: 233 YIHVMDLADGHVVAMEKLANKPG----------VHIYNLG----AGVGNSVLDVVNAFSK 278
Query: 399 KAKKHV---IRMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKW 445
K V R GD+P A+ S A ++ ++ T L + W
Sbjct: 279 ACGKPVNYHFAPRREGDLPAYWADASKADRELNWRVTRTLDEMAQDTWHW 328
>sp|P22715|GALE_SALTY UDP-glucose 4-epimerase OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=galE PE=3 SV=2
Length = 338
Score = 96.3 bits (238), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 159/346 (45%), Gaps = 37/346 (10%)
Query: 119 MTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNF-NSYYDPSLKRARQKLLQKHQVFIVEG 177
M VLVTG +G++GSH + L + G V+ LDN NS S+ ++L KH F VEG
Sbjct: 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKR--SVLPVIERLGGKHPTF-VEG 57
Query: 178 DLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQ 237
D+ + L+T++ V+H A V ++ P Y +N+ G + L+ ++ N +
Sbjct: 58 DIRNEALITEILHDHAIDTVIHFAGLKAVGESVARPLEYYDNNVNGTLRLVSAMRAANVK 117
Query: 238 PSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHI---YGLALTG 294
+++++SS++VYG ++P+ ES T P S Y +K E+I + +AL
Sbjct: 118 -NLIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPEWSIAL-- 174
Query: 295 LRFFTVYG----------PWGRP-DMAYFFFTKDILQGKTIDV----YKTQDDREVARDF 339
LR+F G P G P ++ + + + +++ V Y T+D V RD+
Sbjct: 175 LRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRESLAVFGNDYPTEDGTGV-RDY 233
Query: 340 TYIDDVVKGCVGALDTAGKSTGSGGKKRGPAQLRVYNLGNTSPVPVGRLVSILENLLNTK 399
++ D+ G V A++ +G + +YNLG V +V+
Sbjct: 234 IHVMDLADGHVVAMEKLADKSG----------VHIYNLGAGVGSSVLDVVNAFSKACGKP 283
Query: 400 AKKHVIRMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKW 445
H R+GD+P A+ S A ++ ++ T L + W
Sbjct: 284 INYHFAPR-RDGDLPAYWADASKADRELNWRVTRTLDEMAQDTWHW 328
>sp|Q56093|GALE_SALTI UDP-glucose 4-epimerase OS=Salmonella typhi GN=galE PE=3 SV=2
Length = 338
Score = 96.3 bits (238), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 159/346 (45%), Gaps = 37/346 (10%)
Query: 119 MTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNF-NSYYDPSLKRARQKLLQKHQVFIVEG 177
M VLVTG +G++GSH + L + G V+ LDN NS S+ ++L KH F VEG
Sbjct: 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKR--SVLPVIERLGGKHPTF-VEG 57
Query: 178 DLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQ 237
D+ + L+T++ V+H A V ++ P Y +N+ G + L+ ++ N +
Sbjct: 58 DIRNEALITEILHDHAIDTVIHFAGLKAVGESVAKPLEYYDNNVNGTLRLVSAMRAANVK 117
Query: 238 PSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHI---YGLALTG 294
+++++SS++VYG ++P+ ES T P S Y +K E+I + +AL
Sbjct: 118 -NLIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPEWSIAL-- 174
Query: 295 LRFFTVYG----------PWGRP-DMAYFFFTKDILQGKTIDV----YKTQDDREVARDF 339
LR+F G P G P ++ + + + +++ V Y T+D V RD+
Sbjct: 175 LRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRESLAVFGNDYPTEDGTGV-RDY 233
Query: 340 TYIDDVVKGCVGALDTAGKSTGSGGKKRGPAQLRVYNLGNTSPVPVGRLVSILENLLNTK 399
++ D+ G V A++ +G + +YNLG V +V+
Sbjct: 234 IHVMDLADGHVVAMEKLADKSG----------VHIYNLGAGVGSSVLDVVNAFSKACGKP 283
Query: 400 AKKHVIRMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKW 445
H R+GD+P A+ S A ++ ++ T L + W
Sbjct: 284 INYHFAPR-RDGDLPAYWADASKADRELNWRVTRTLDEMAQDTWHW 328
>sp|A0R5C5|GALE_MYCS2 UDP-glucose 4-epimerase OS=Mycobacterium smegmatis (strain ATCC
700084 / mc(2)155) GN=MSMEG_6142 PE=1 SV=2
Length = 313
Score = 96.3 bits (238), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 143/331 (43%), Gaps = 26/331 (7%)
Query: 119 MTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGD 178
M LVTGAAGF+GS L G GV+GLD+ +S +L A + V+ D
Sbjct: 1 MRTLVTGAAGFIGSTLVDRLLADGHGVVGLDDLSSGRAENLHSAENS----DKFEFVKAD 56
Query: 179 LNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQP 238
+ DA L L + P + HLAAQ V+ ++ +P N+ G V L E + +
Sbjct: 57 IVDADLTGLLAEFKPEV-IFHLAAQISVKRSVDDPPFDATVNVVGTVRLAEAARLAGVRK 115
Query: 239 SIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRFF 298
+ +S SVYG P SE + PAS YAA K AGE + Y ++Y L + +
Sbjct: 116 VVHTSSGGSVYGTPPAYPTSEDMPVN-PASPYAAGKVAGEVYLNMYRNLYDLDCSHIAPA 174
Query: 299 TVYGPWGRPD---MAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGALDT 355
VYGP P F++ +L G+T ++ D T V V A
Sbjct: 175 NVYGPRQDPHGEAGVVAIFSEALLAGRTTKIFGDGSD-------TRDYVFVDDVVDAFVR 227
Query: 356 AGKSTGSGGKKRGPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAKKHVIRMPRNGDVPY 415
AG G G + +N+G L + + + + PR GD+
Sbjct: 228 AGGPAGGGQR---------FNVGTGVETSTRELHTAIAGAVGAPDEPE-FHPPRLGDLRR 277
Query: 416 THANVSLAYKDFGYKPTTDLAAGLRKFVKWY 446
+ + + A + G++P LA G+ K V+++
Sbjct: 278 SRLDNTRAREVLGWQPQVALAEGIAKTVEFF 308
>sp|Q42605|GALE1_ARATH UDP-glucose 4-epimerase 1 OS=Arabidopsis thaliana GN=At1g12780 PE=1
SV=2
Length = 351
Score = 96.3 bits (238), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 98/349 (28%), Positives = 154/349 (44%), Gaps = 42/349 (12%)
Query: 121 VLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKL---LQKHQVFIVEG 177
+LVTG AGF+G+H + L K G V +DNF++ ++ R R+ + L K F + G
Sbjct: 9 ILVTGGAGFIGTHTVVQLLKDGFKVSIIDNFDNSVIEAVDRVRELVGPDLSKKLDFNL-G 67
Query: 178 DLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQ 237
DL + + KLF F V+H A V +++NP+ Y +N+ G +NL E N +
Sbjct: 68 DLRNKGDIEKLFSKQRFDAVIHFAGLKAVGESVENPRRYFDNNLVGTINLYETMAKYNCK 127
Query: 238 PSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIY-GLALTGLR 296
+V++SS++VYG ++P E + + Y TK EEIA + LR
Sbjct: 128 -MMVFSSSATVYGQPEKIPCMEDFEL-KAMNPYGRTKLFLEEIARDIQKAEPEWRIILLR 185
Query: 297 FFTVYG----------PWGRPD--MAYFFFTKDILQGKTIDV------YKTQDDREVARD 338
+F G P G P+ M Y + + G+ ++ Y T+D V RD
Sbjct: 186 YFNPVGAHESGSIGEDPKGIPNNLMPYI---QQVAVGRLPELNVYGHDYPTEDGSAV-RD 241
Query: 339 FTYIDDVVKGCVGALDTAGKSTGSGGKKRGPAQLRVYNLGNTSPVPVGRLVSILENLLNT 398
+ ++ D+ G + AL G YNLG V +V+ E
Sbjct: 242 YIHVMDLADGHIAALRKLFADPKIG--------CTAYNLGTGQGTSVLEMVAAFE---KA 290
Query: 399 KAKKHVIRMP--RNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKW 445
KK I++ R+GD +A+ A K+ G+K + R KW
Sbjct: 291 SGKKIPIKLCPRRSGDATAVYASTEKAEKELGWKAKYGVDEMCRDQWKW 339
>sp|O65780|GALE1_CYATE UDP-glucose 4-epimerase GEPI42 OS=Cyamopsis tetragonoloba PE=2 SV=1
Length = 354
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 98/354 (27%), Positives = 152/354 (42%), Gaps = 34/354 (9%)
Query: 112 TPRRPNGMTVLVTGAAGFVGSHCSLALKKRGDGVLGLDN-FNSYYDPSLKRARQKL--LQ 168
+ R +G T+LVTG AGF+GSH + L K+G V +DN +NS D ++ R R + L
Sbjct: 3 SSRMASGETILVTGGAGFIGSHTVVQLLKQGFHVSIIDNLYNSVID-AVHRVRLLVGPLL 61
Query: 169 KHQVFIVEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLL 228
+ GDL + L LF F V+H A GV ++ NP +Y +N+ +NL
Sbjct: 62 SSNLHFHHGDLRNIHDLDILFSKTKFDAVIHFAGLKGVGESVLNPSNYYDNNLVATINLF 121
Query: 229 EVCKSVNPQPSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIY 288
+V N + +V +SS++VYG Q+P E + Y +K EE+A
Sbjct: 122 QVMSKFNCK-KLVISSSATVYGQPDQIPCVEDSNL-HAMNPYGRSKLFVEEVARDIQRAE 179
Query: 289 G-LALTGLRFFTVYG----------PWGRP-DMAYFFFTKDILQGKTIDVYKTQ---DDR 333
+ LR+F G P G P ++ + + + +++Y D
Sbjct: 180 AEWRIILLRYFNPVGAHESGQIGEDPRGLPNNLMPYIQQVAVARLPELNIYGHDYPTKDG 239
Query: 334 EVARDFTYIDDVVKGCVGALDTAGKSTGSGGKKRGPAQLRVYNLGNTSPVPVGRLVSILE 393
RD+ ++ D+ G + AL + G YNLG V +V+ E
Sbjct: 240 TAIRDYIHVMDLADGHIAALRKLFTTDNIG--------CTAYNLGTGRGTSVLEMVAAFE 291
Query: 394 NLLNTKAKKHVIRM-PRN-GDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKW 445
KK I+M PR GD +A+ A K+ G+K + R KW
Sbjct: 292 ---KASGKKIPIKMCPRRPGDATAVYASTEKAEKELGWKAKYGVEEMCRDQWKW 342
>sp|Q9KDV3|GALE_BACHD UDP-glucose 4-epimerase OS=Bacillus halodurans (strain ATCC BAA-125
/ DSM 18197 / FERM 7344 / JCM 9153 / C-125) GN=galE PE=3
SV=1
Length = 334
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 140/327 (42%), Gaps = 38/327 (11%)
Query: 119 MTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGD 178
M +LVTG AG++GSH L L ++G+ V+ LDN + +L V GD
Sbjct: 1 MAILVTGGAGYIGSHTVLFLLEQGEQVIVLDNLQKGHAGALS----------DVTFYHGD 50
Query: 179 LNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQP 238
+ D LL +F V+H AA + V +++ P Y +N+ G LL+ + +
Sbjct: 51 IRDDQLLDTIFTTHSIDTVIHFAANSLVGESVKQPIEYYENNVIGTHTLLKKMLEHDVK- 109
Query: 239 SIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRFF 298
IV++S+++ YG Q+P ES T P + Y TK A E++ H YGL LR+F
Sbjct: 110 KIVFSSTAATYGEPVQIPIQESDPT-IPTNPYGETKLAIEKMFHWCQEAYGLQYVCLRYF 168
Query: 299 TVYG--PWGR------PDMAYFFFTKDILQGKTI------DVYKTQDDREVARDFTYIDD 344
G P GR P+ + G+ D Y+T+D + RD+ ++ D
Sbjct: 169 NAAGADPNGRIGEDHSPESHLIPIVLQVALGQRERVAIFGDDYQTEDGSCI-RDYIHVMD 227
Query: 345 VVKGCVGALDTAGKSTGSGGKKRGPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAKKHV 404
+ A + K SG +NLGN V ++ + +
Sbjct: 228 LANAHYLACEHLRKDGQSGS----------FNLGNGKGFSVKEVIEVCRQVTGHPIPAE- 276
Query: 405 IRMPRNGDVPYTHANVSLAYKDFGYKP 431
I R+GD A+ A G++P
Sbjct: 277 IAPRRSGDPASLIASSEKAQTILGWEP 303
>sp|Q9F7D4|GALE_YERPE UDP-glucose 4-epimerase OS=Yersinia pestis GN=galE PE=3 SV=1
Length = 338
Score = 92.8 bits (229), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 150/337 (44%), Gaps = 39/337 (11%)
Query: 119 MTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGD 178
M VLVTG +G++GSH + L + G + LDN + L AR L + + GD
Sbjct: 1 MYVLVTGGSGYIGSHTCVQLIEAGYKPVILDNLCNSKSSVL--ARIHSLTGYTPELYAGD 58
Query: 179 LNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQP 238
+ D LL +F P V+H A V ++ P Y +N+ G + LLE ++ +
Sbjct: 59 IRDRTLLDSIFAAHPIHAVIHFAGLKAVGESVNRPLEYYNNNVFGTLVLLEAMRAAQVK- 117
Query: 239 SIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLA-----LT 293
+++++SS++VYG Q+P+ ES T P+S Y +K E+I LA +T
Sbjct: 118 NLIFSSSATVYGDQPQIPYVESFPTGSPSSPYGRSKLMVEQILQDVQ----LADPQWNMT 173
Query: 294 GLRFFTVYG----------PWGRP-DMAYFFFTKDILQGKTIDV----YKTQDDREVARD 338
LR+F G P G P ++ F + + +++ + Y T D V RD
Sbjct: 174 ILRYFNPVGAHPSGLMGEDPQGIPNNLMPFIAQVAVGRRESLAIFGNGYPTPDGTGV-RD 232
Query: 339 FTYIDDVVKGCVGALDTAGKSTGSGGKKRGPAQLRVYNLGNTSPVPVGRLVSILENLLNT 398
+ ++ D+ G V A+ T G + ++NLG V ++V+
Sbjct: 233 YIHVVDLADGHVAAMKTL----------HGKPGVHIFNLGAGVGHSVLQVVAAFSKACGK 282
Query: 399 KAKKHVIRMPRNGDVPYTHANVSLAYKDFGYKPTTDL 435
H R GD+P A+ + A + G++ + L
Sbjct: 283 PLAYHFAPR-REGDLPAYWADATKAAEQLGWRVSRSL 318
>sp|Q05026|GALE_NEIGO UDP-glucose 4-epimerase OS=Neisseria gonorrhoeae GN=galE PE=3 SV=1
Length = 338
Score = 92.8 bits (229), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 157/351 (44%), Gaps = 47/351 (13%)
Query: 119 MTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGD 178
MTVL+TG GF+GSH +++L + G + LDN + L R RQ + + +GD
Sbjct: 1 MTVLITGGTGFIGSHTAVSLVQSGYDAVILDNLCNSSAAVLPRLRQ--ITGRNIPFYQGD 58
Query: 179 LNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQP 238
+ D +L ++F V+H A V ++ P Y +N+ G + L E
Sbjct: 59 IRDCQILRQIFSEHEIESVIHFAGLKAVGESVAEPTKYYGNNVYGSLVLAEEMARAGVL- 117
Query: 239 SIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEI---AHTYNHIYGLALTGL 295
IV++SS++VYG +VP++E R A+ Y A+K E + + + + L L
Sbjct: 118 KIVFSSSATVYGDAEKVPYTEDMRPGDTANPYGASKAMVERMLTDIQKADPRWSVIL--L 175
Query: 296 RFFTVYG----------PWGRPDMAYFFFTKDILQGKTIDV------YKTQDDREVARDF 339
R+F G P G P+ + + + G+ + Y T D + RD+
Sbjct: 176 RYFNPIGAHESGLIGEQPNGVPNNLLPYICQ-VASGRLPQLSVFGGDYPTPDGTGM-RDY 233
Query: 340 TYIDDVVKGCVGALDTAGKSTGSGGKKRGPAQLRVYNLGNTSPVPVGRLVSILENLLNTK 399
++ D+ +G + A+ G G A + ++NLG+ GR S+LE + +
Sbjct: 234 IHVMDLAEGHIAAMKAKG----------GVAGVHLFNLGS------GRAYSVLEIIRAFE 277
Query: 400 AKK--HV---IRMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKW 445
A H+ I+ R GD+ ++A+ S + G++ L + +W
Sbjct: 278 AASGLHIPYRIQPRRAGDLACSYADPSHTKQQTGWETKRGLQQMMEDSWRW 328
>sp|Q45291|GALE_CORGL UDP-glucose 4-epimerase OS=Corynebacterium glutamicum (strain ATCC
13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025)
GN=galE PE=3 SV=2
Length = 329
Score = 92.4 bits (228), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 153/337 (45%), Gaps = 53/337 (15%)
Query: 119 MTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNF---NSYYDPSLKRARQKLLQKHQVFIV 175
M +LVTG AG+VGS + L + G V +DNF N P+ R ++
Sbjct: 1 MKLLVTGGAGYVGSVAAAVLLEHGHDVTIIDNFSTGNREAVPADAR------------LI 48
Query: 176 EGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKS-- 233
EGD+ND ++ ++ F V+H AA++ V +++ P Y N+ + LL+ ++
Sbjct: 49 EGDVND--VVEEVLSEGGFEGVVHFAARSLVGESVEKPNEYWHDNVVTALTLLDAMRAHG 106
Query: 234 VNPQPSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALT 293
VN ++V++S+++ YG VP +E T QP + Y ATK + + +Y +GLA T
Sbjct: 107 VN---NLVFSSTAATYGEPDVVPITEDMPT-QPTNAYGATKLSIDYAITSYAAAFGLAAT 162
Query: 294 GLRFFTV---YGPWGRPDMAYFFFTKDILQGKTIDVYKT--------QDDREVARDFTYI 342
LR+F V YG G +LQ T KT D RD+ +I
Sbjct: 163 SLRYFNVAGAYGNIGENREVETHLIPLVLQVATGHREKTFMFGDDWPTPDGTAVRDYIHI 222
Query: 343 DDVVKGCVGALDT--AGKSTGSGGKKRGPAQLRVYNLGNTSPVPVGRLVSILENLLNTKA 400
D+ K V AL++ AGK R++NLG+ V ++V + +
Sbjct: 223 LDLAKAHVLALESNEAGKH-------------RIFNLGSGDGYSVKQVVEMCREVTGHPI 269
Query: 401 KKHVIRMPRNGDVPYTH-ANVSLAYKDFGYKPT-TDL 435
V PR P T A+ A ++ G+ P TDL
Sbjct: 270 PAEV--APRRAGDPATLIASSEKAKQELGWTPEHTDL 304
>sp|P33119|GALE_CORDI UDP-glucose 4-epimerase OS=Corynebacterium diphtheriae (strain ATCC
700971 / NCTC 13129 / Biotype gravis) GN=galE PE=3 SV=2
Length = 328
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 144/329 (43%), Gaps = 37/329 (11%)
Query: 119 MTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGD 178
M +LVTG AG+VGS CS L ++G V +DN L + + F VEGD
Sbjct: 1 MKLLVTGGAGYVGSVCSTVLLEQGHEVTIVDN--------LTTGNRDAVPLGATF-VEGD 51
Query: 179 LNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQP 238
+ D + + F VLH AA++ V +++ P Y N+ + LL+ K N +
Sbjct: 52 IKD--VADNVLSSDSFDAVLHFAARSLVGESVEKPDEYWQHNMVTTLALLDAMKRNNVR- 108
Query: 239 SIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRFF 298
+IV++S+++ YG VP +E T P + Y ATK + + +Y H YG A T LR+F
Sbjct: 109 NIVFSSTAATYGEPETVPITEDAPT-HPTNPYGATKLSIDYAITSYAHAYGFAATSLRYF 167
Query: 299 TVYGPWG------RPDMAYFFFTKDILQGKTIDVYKTQDDREVA-----RDFTYIDDVVK 347
V G +G + + G ++ DD RD+ +I D+
Sbjct: 168 NVAGAYGLVGENREIETHLIPLVLQVALGHRDKIFMFGDDWPTEDGTPIRDYIHIRDLAD 227
Query: 348 GCVGALDTAGKSTGSGGKKRGPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAKKHVIRM 407
+ AL +S G R++NLG+ V +++ + V
Sbjct: 228 AHILAL----QSNVEGSH-------RIFNLGSGEGYSVKQVIDTCREVTGHLIPAEVAPR 276
Query: 408 PRNGDVPYTHANVSLAYKDFGYKPT-TDL 435
R GD A+ + A + G+KP TDL
Sbjct: 277 -RAGDPAVLIASSAKAQSELGWKPQRTDL 304
>sp|O84903|GALE_LACCA UDP-glucose 4-epimerase OS=Lactobacillus casei GN=galE PE=3 SV=1
Length = 331
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 126/277 (45%), Gaps = 32/277 (11%)
Query: 119 MTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLK-RARQKLLQKHQVFIVEG 177
MT+ V G AG++GSH L G+ V+ LDN + + ++ RAR +G
Sbjct: 1 MTIAVLGGAGYIGSHTVKQLLAAGEDVVVLDNLITGHRKAVDPRAR----------FYQG 50
Query: 178 DLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQ 237
D+ D L+++F ++H AA + V +M++P Y +N G + LLE +
Sbjct: 51 DIRDYHFLSQVFSQEKIDGIVHFAAFSIVPESMKDPLKYFDNNTGGMITLLEAMNQFGIK 110
Query: 238 PSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRF 297
IV++S+++ YG QVP E+ P + Y +K A E+I H + YGL LR+
Sbjct: 111 -KIVFSSTAATYGEPKQVPIKET-DPQVPTNPYGESKLAMEKIMHWADVAYGLKFVALRY 168
Query: 298 FTVYGPW-----GRPDMAYFFFTKDILQ-------GKTI--DVYKTQDDREVARDFTYID 343
F V G G ILQ G I D Y T+D V RD+ ++
Sbjct: 169 FNVAGAMPDGSIGEDHHPETHIVPIILQVAAGTRTGLQIYGDDYPTKDGTNV-RDYVHVV 227
Query: 344 DVVKGCVGA---LDTAGKSTG-SGGKKRGPAQLRVYN 376
D+ + A LD KS+ + G G + L + N
Sbjct: 228 DLADAHILALKYLDAGNKSSAFNIGSAHGFSNLEILN 264
>sp|Q9SN58|GALE2_ARATH UDP-glucose 4-epimerase 2 OS=Arabidopsis thaliana GN=At4g10960 PE=2
SV=3
Length = 351
Score = 89.7 bits (221), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 101/361 (27%), Positives = 153/361 (42%), Gaps = 68/361 (18%)
Query: 121 VLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQ------KLLQKHQVFI 174
VLV+G AG++GSH L L G V+ +DN ++ SL+R ++ + L HQV
Sbjct: 6 VLVSGGAGYIGSHTVLQLLLGGYSVVVVDNLDNSSAVSLQRVKKLAAEHGERLSFHQV-- 63
Query: 175 VEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEV---- 230
DL D L K+F F V+H A V +++ P Y +N+ G + LLEV
Sbjct: 64 ---DLRDRSALEKIFSETKFDAVIHFAGLKAVGESVEKPLLYYNNNLVGTITLLEVMAQH 120
Query: 231 -CKSVNPQPSIVWASSSSVYGLNTQVPFSESHRTDQPASL---YAATKKAGEEIAHTYNH 286
CK ++V++SS++VYG +VP +E P S Y TK EEI
Sbjct: 121 GCK------NLVFSSSATVYGSPKEVPCTEEF----PISALNPYGRTKLFIEEICRD--- 167
Query: 287 IYG----LALTGLRFFTVYG----------PWGRPDMAYFFFTKDILQGKTIDV------ 326
+YG + LR+F G P G P+ F + + G+ +
Sbjct: 168 VYGSDPEWKIILLRYFNPVGAHPSGDIGEDPRGIPN-NLMPFVQQVAVGRRPHLTVFGND 226
Query: 327 YKTQDDREVARDFTYIDDVVKGCVGALDTAGKSTGSGGKKRGPAQL--RVYNLGNTSPVP 384
Y T+D V RD+ ++ D+ G + AL +K ++ VYNLG +
Sbjct: 227 YNTKDGTGV-RDYIHVIDLADGHIAAL-----------RKLEDCKIGCEVYNLGTGNGTS 274
Query: 385 VGRLVSILENLLNTKAKKHVIRMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVK 444
V +V E + K VI R GD +A+ A + +K + R
Sbjct: 275 VLEMVDAFEK-ASGKKIPLVIAGRRPGDAEVVYASTERAESELNWKAKYGIEEMCRDLWN 333
Query: 445 W 445
W
Sbjct: 334 W 334
>sp|Q9SA77|ARAE1_ARATH UDP-arabinose 4-epimerase 1 OS=Arabidopsis thaliana GN=MUR4 PE=1
SV=1
Length = 419
Score = 89.4 bits (220), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 100/378 (26%), Positives = 168/378 (44%), Gaps = 48/378 (12%)
Query: 114 RRPNGMT-VLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQV 172
R G+T VLVTG AG++GSH +L L K V +DN + +++ ++ + ++
Sbjct: 65 RHEPGVTHVLVTGGAGYIGSHAALRLLKESYRVTIVDNLSRGNLAAVRILQELFPEPGRL 124
Query: 173 FIVEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCK 232
+ DL DA + K+F F V+H AA A V + Q P Y + + + +LE
Sbjct: 125 QFIYADLGDAKAVNKIFTENAFDAVMHFAAVAYVGESTQFPLKYYHNITSNTLVVLETM- 183
Query: 233 SVNPQPSIVWASSSSVYGLNTQVPFSESHRTDQ-PASLYAATKKAGEEIAHTYNHIYGLA 291
+ + +++++S+ + YG +P +E T Q P + Y KK E+I ++ +A
Sbjct: 184 AAHGVKTLIYSSTCATYGEPDIMPITE--ETPQVPINPYGKAKKMAEDIILDFSKNSDMA 241
Query: 292 LTGLRFFTVYG--PWG------RPDM--------AYFFFTKDILQGKTID--VYKTQDDR 333
+ LR+F V G P G RP++ A F + I+ G I YKT D
Sbjct: 242 VMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIMPGLQIKGTDYKTADGT 301
Query: 334 EVARDFTYIDDVVKGCVGALDTAGKSTGSGGKKRGPAQLRVYNLGNTSPVPVGRLVSILE 393
V RD+ + D+V V AL +K P ++ +YN+G V V +
Sbjct: 302 CV-RDYIDVTDLVDAHVKAL-----------QKAKPRKVGIYNVGTGKGSSVKEFVEACK 349
Query: 394 NLLNTKAKKHVIRMPRN-GDVPYTHANVSLAYKDFGYKPT-TDLAAGLRKFVKWYVSYYG 451
+ K + +PR GD +++ S K+ + T+L L +W +
Sbjct: 350 KATGVEIK--IDYLPRRAGDYAEVYSDPSKIRKELNWTAKHTNLKESLETAWRWQKLH-- 405
Query: 452 IQPRVKKENGFSTTTSTI 469
NG+ TTS++
Sbjct: 406 -------RNGYGLTTSSV 416
>sp|Q9W0P5|GALE_DROME Probable UDP-glucose 4-epimerase OS=Drosophila melanogaster GN=Gale
PE=2 SV=1
Length = 350
Score = 89.0 bits (219), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 142/346 (41%), Gaps = 31/346 (8%)
Query: 120 TVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLK----RARQKLLQKHQVFIV 175
TVLVTG AG++GSH L + G V+ +DN + Y K +R + + +V
Sbjct: 5 TVLVTGGAGYIGSHTVLEMLNAGYNVICVDNLCNAYSSGAKLPEALSRVQEITGKKVNFY 64
Query: 176 EGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVN 235
D+ D + +F V H AA V + + P Y +N+ G LLE N
Sbjct: 65 RVDITDREQVRSVFQEHKIDMVAHFAALKAVGESCRIPLQYYHNNMTGTNVLLEAMAD-N 123
Query: 236 PQPSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEI-AHTYNHIYGLALTG 294
V++SS++VYG +P +E H T S Y TK EEI A+
Sbjct: 124 NVFKFVYSSSATVYGEPKFLPVTEEHPTGNCTSPYGKTKYFTEEILKDLCKSDKRWAVVS 183
Query: 295 LRFFTVYG----------PWGRPDMAYFFFTKDILQGK--TIDVYKTQ---DDREVARDF 339
LR+F G P G P+ + + + G+ ++ VY + D RD+
Sbjct: 184 LRYFNPVGAHISGRIGEDPNGEPNNLMPYIAQ-VAVGRRPSLSVYGSDFPTHDGTGVRDY 242
Query: 340 TYIDDVVKGCVGALDTAGKSTGSGGKKRGPAQLRVYNLGNTSPVPVGRLVSILENLLNTK 399
+I D+ +G V ALD +G YNLG V +V E K
Sbjct: 243 IHIVDLAEGHVKALDKLRNIAETG--------FFAYNLGTGVGYSVLDMVKAFEKASGKK 294
Query: 400 AKKHVIRMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKW 445
++ R+GDV +A+ +LA K G+K + +W
Sbjct: 295 VNYTLVDR-RSGDVATCYADATLADKKLGWKAERGIDKMCEDTWRW 339
>sp|Q59678|GALE_PASHA UDP-glucose 4-epimerase OS=Pasteurella haemolytica GN=galE PE=3
SV=1
Length = 338
Score = 88.6 bits (218), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 145/344 (42%), Gaps = 33/344 (9%)
Query: 119 MTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGD 178
M +LVTG AG++GSH + L ++ LDN ++ + SL+R +Q + V +GD
Sbjct: 1 MAILVTGGAGYIGSHTLVELLNENREIVVLDNLSNSSEVSLERVKQ--ITGKSVKFYQGD 58
Query: 179 LNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQP 238
+ D +L K+F V+H A V +N + +N+ G + L+E N
Sbjct: 59 ILDRDILRKIFAENQIESVIHFAGLKAVGETSENRYVTIKNNVTGSIVLVEEMLKANVN- 117
Query: 239 SIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAH-TYNHIYGLALTGLRF 297
+IV++SS++VYG +P ES + Y +K E I T L+ LR+
Sbjct: 118 TIVFSSSATVYGDPQIIPIVESCPVGGTTNPYGTSKYMVERILEDTVKAFPQLSAVVLRY 177
Query: 298 FTVYG----------PWGRPDMAYFFFTKDILQGKTIDV------YKTQDDREVARDFTY 341
F G P G P+ F ++ + GK + Y T D V RD+ +
Sbjct: 178 FNRVGAHESGLIGEDPNGIPNNLMPFISQ-VAVGKLPQLSVFGGDYNTHDGTGV-RDYIH 235
Query: 342 IDDVVKGCVGALDTAGKSTGSGGKKRGPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAK 401
+ D+ G + ALD K + A VYNLG + V +V E
Sbjct: 236 VVDLALGHLKALD----------KHQNDAGFHVYNLGTGTGYSVLDMVKAFEAANGITIP 285
Query: 402 KHVIRMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKW 445
V+ R GD+ ++ A + G++ L ++ W
Sbjct: 286 YKVVDR-RPGDIAVCYSAPQKALEQLGWETERGLEQMMKDTWNW 328
>sp|Q59745|EXOB_RHILT UDP-glucose 4-epimerase OS=Rhizobium leguminosarum bv. trifolii
GN=exoB PE=3 SV=1
Length = 327
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 142/343 (41%), Gaps = 38/343 (11%)
Query: 118 GMTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEG 177
G TVLV G AG++GSH L L +G + DNF++ + ++ + EG
Sbjct: 3 GETVLVVGGAGYIGSHTCLDLANKGYRPVVFDNFSNGHREFVRWGPAE----------EG 52
Query: 178 DLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQ 237
D+ D L ++ +LH AA V ++++P S+ +N+ G + LL ++
Sbjct: 53 DIRDRARLDEVLAKHKPAAILHFAALIEVGESVKDPVSFYENNVIGTLTLLSAAQAAGIN 112
Query: 238 PSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRF 297
+ V++S+ + YGL VP E+HR P + Y TK E+ Y+ L LR+
Sbjct: 113 -AFVFSSTCATYGLPQSVPLDETHRQ-VPINPYGRTKYIVEQALADYDQYGSLRSVVLRY 170
Query: 298 FTV--------YGPWGRPDMAYFFFTKDILQGKTIDV------YKTQDDREVARDFTYID 343
F G W +P+ D G+ Y+T+D V RD+ ++
Sbjct: 171 FNAAGADFEGRIGEWHQPETHAIPLAIDAALGRRQGFKVFGSDYETRDGTCV-RDYIHVL 229
Query: 344 DVVKGCVGALDTAGKSTGSGGKKRGPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAKKH 403
D+ V A++ K S NLG + V L+ +E + N
Sbjct: 230 DLADAHVRAVEYLLKGGDS----------VALNLGTGTGTTVKELLGAIEEVSNRPFPVE 279
Query: 404 VIRMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKWY 446
I R GD AN A G+ P DL+ +R W+
Sbjct: 280 YIGR-REGDSHTLVANNDKARDVLGWVPQYDLSEIIRSAWDWH 321
>sp|Q7WTB1|GALE_LACHE UDP-glucose 4-epimerase OS=Lactobacillus helveticus GN=galE PE=2
SV=1
Length = 330
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 149/333 (44%), Gaps = 49/333 (14%)
Query: 119 MTVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGD 178
M VLV G AG++GSH L K G+ VL LD +L +K + F +GD
Sbjct: 1 MKVLVIGGAGYIGSHAVRELVKEGNDVLVLD--------ALYTGHRKAVDPKAKF-YQGD 51
Query: 179 LNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQP 238
+ D L++K+ V+H AA + V +++ P Y +N+ G ++LL+ N +
Sbjct: 52 IEDTFLVSKILRDEKIDAVMHFAAYSLVPESVKKPLKYYDNNVTGMISLLQAMNDANVK- 110
Query: 239 SIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRFF 298
+V++SS++ YG+ ++P +E + P + Y TK E+I + G+ T LR+F
Sbjct: 111 YLVFSSSAATYGIPKKLPITEDTPLN-PINPYGETKMMMEKIMAWADKADGIKYTALRYF 169
Query: 299 TVYGP-----WGRPDMAYFFFTKDILQ------GK-TI--DVYKTQDDREVARDFTYIDD 344
V G G +IL+ GK TI D Y T+D V RD+ ++D
Sbjct: 170 NVAGASSDGSIGEDHAPETHLIPNILKSAISGDGKFTIFGDDYDTKDGTNV-RDYVQVED 228
Query: 345 VVKGCVGALDTAGKSTGSGGKKRGPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAKKHV 404
++ + AL K+ S V+NLG S LE +L + K
Sbjct: 229 LIDAHILALKHMMKTNKS----------DVFNLGTAHG------YSNLE-ILESAKKVTG 271
Query: 405 IRMP------RNGDVPYTHANVSLAYKDFGYKP 431
I +P R GD A+ + A G+KP
Sbjct: 272 IDIPYTMGPRRGGDPDSLVADSTKARTVLGWKP 304
>sp|Q8VDR7|TGDS_MOUSE dTDP-D-glucose 4,6-dehydratase OS=Mus musculus GN=Tgds PE=2 SV=2
Length = 355
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 145/336 (43%), Gaps = 34/336 (10%)
Query: 121 VLVTGAAGFVGSHCSLALKKRGDG--VLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGD 178
VLVTG AGF+ SH ++L + ++ LD + Y SLK + + K ++GD
Sbjct: 20 VLVTGGAGFIASHVIVSLVEDYPDYMIVNLDKLD--YCASLKNL-EPVSNKQNYKFIQGD 76
Query: 179 LNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQP 238
+ D+ + LF+V VLH AAQ V + + N+ G L+ +
Sbjct: 77 ICDSHFVKLLFEVEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVNAAYEAGVE- 135
Query: 239 SIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRFF 298
++ S+ VYG + F ES QP + YA++K A E +Y Y + R
Sbjct: 136 KFIYVSTDEVYGGSLDQEFDES-SPKQPTNPYASSKAAAECFVQSYWERYKFPVVITRSS 194
Query: 299 TVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGALDTAGK 358
VYGP P+ F + + ++ + R R+F Y DVV+ + L
Sbjct: 195 NVYGPHQYPEKVIPKFISLLQHNRKCCIHGSGLQR---RNFLYAADVVEAFLTVL----- 246
Query: 359 STGSGGKKRGPAQLRVYNLGNTSPVPVGRLVSILENLL---NTKAK-----KHVIRMPRN 410
+ G G+ +YN+G + V +L L L+ N++++ +V P N
Sbjct: 247 TKGEPGE--------IYNIGTNFEMSVVQLAKELIQLIKETNSESETESWVDYVSDRPHN 298
Query: 411 GDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKWY 446
D+ Y + + G+KP G++K V+WY
Sbjct: 299 -DMRYPMKSEKI--HSLGWKPKVPWEEGIKKTVEWY 331
>sp|Q9SYM5|RHM1_ARATH Probable rhamnose biosynthetic enzyme 1 OS=Arabidopsis thaliana
GN=RHM1 PE=1 SV=1
Length = 669
Score = 86.7 bits (213), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 133/343 (38%), Gaps = 49/343 (14%)
Query: 121 VLVTGAAGFVGSHCS-----------LALKKRGDGVLGLDNFN-SYYDPSLKRARQKLLQ 168
+L+TGAAGF+ SH + + + + D L N N S + P+ K
Sbjct: 9 ILITGAAGFIASHVANRLIRSYPDYKIVVLDKLDYCSNLKNLNPSKHSPNFK-------- 60
Query: 169 KHQVFIVEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLL 228
V+GD+ A L+ L ++H AAQ V + N + +NI G LL
Sbjct: 61 -----FVKGDIASADLVNHLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLL 115
Query: 229 EVCKSVNPQPSIVWASSSSVYGLNTQVPFSESHRTDQ--PASLYAATKKAGEEIAHTYNH 286
E CK + S+ VYG + +H Q P + Y+ATK E + Y
Sbjct: 116 EACKVTGQIRRFIHVSTDEVYGETDEDALVGNHEASQLLPTNPYSATKAGAEMLVMAYGR 175
Query: 287 IYGLALTGLRFFTVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVV 346
YGL + R VYGP P+ F ++G+ + ++ D R + Y +DV
Sbjct: 176 SYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMRGQVLPIH---GDGSNVRSYLYCEDVA 232
Query: 347 KGCVGALDTAGKSTGSGGKKRGPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAK---KH 403
+ L G G VYN+G V + + L N + K
Sbjct: 233 EAFEVVL-----HKGEVG--------HVYNIGTKKERRVNDVAKDICKLFNMDPEANIKF 279
Query: 404 VIRMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKWY 446
V P N D Y + L K G+ T GL+K + WY
Sbjct: 280 VDNRPFN-DQRYFLDDQKL--KKLGWSERTTWEEGLKKTMDWY 319
>sp|Q9LH76|RHM3_ARATH Probable rhamnose biosynthetic enzyme 3 OS=Arabidopsis thaliana
GN=RHM3 PE=1 SV=1
Length = 664
Score = 86.7 bits (213), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 137/333 (41%), Gaps = 29/333 (8%)
Query: 121 VLVTGAAGFVGSHCSLALKKR--GDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGD 178
+L+TGAAGF+ SH + L + ++ LD + Y +LK + F V+GD
Sbjct: 9 ILITGAAGFIASHVANRLVRSYPDYKIVVLDKLD--YCSNLKNLNPSKSSPNFKF-VKGD 65
Query: 179 LNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQP 238
+ A L+ L ++H AAQ V + N + +NI G LLE CK
Sbjct: 66 IASADLVNYLLITEEIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIR 125
Query: 239 SIVWASSSSVYGLNTQVPFSESHRTDQ--PASLYAATKKAGEEIAHTYNHIYGLALTGLR 296
+ S+ VYG + +H Q P + Y+ATK E + Y YGL + R
Sbjct: 126 RFIHVSTDEVYGETDEDASVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTR 185
Query: 297 FFTVYGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGALDTA 356
VYGP P+ F + GK + ++ D R + Y +DV + L
Sbjct: 186 GNNVYGPNQFPEKLIPKFILLAMNGKPLPIH---GDGSNVRSYLYCEDVAEAFEVVL--- 239
Query: 357 GKSTGSGGKKRGPAQLRVYNLGNTSP---VPVGRLVSILENLLNTKAKKHVIRMPRNGDV 413
+G VYN+G T + V +S L + ++V P N D
Sbjct: 240 ---------HKGEVN-HVYNIGTTRERRVIDVANDISKLFGIDPDSTIQYVENRPFN-DQ 288
Query: 414 PYTHANVSLAYKDFGYKPTTDLAAGLRKFVKWY 446
Y + L K G+ T+ GLRK ++WY
Sbjct: 289 RYFLDDQKL--KKLGWCERTNWEEGLRKTMEWY 319
>sp|P56985|GALE_NEIMB UDP-glucose 4-epimerase OS=Neisseria meningitidis serogroup B
(strain MC58) GN=galE PE=3 SV=1
Length = 339
Score = 86.3 bits (212), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 150/349 (42%), Gaps = 47/349 (13%)
Query: 121 VLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGDLN 180
+LVTG GF+GSH ++L K G V+ LDN + L R K + ++ +GD+
Sbjct: 4 ILVTGGTGFIGSHTVVSLLKSGHQVVILDNLCNSSINILPRL--KTITGQEIPFYQGDIR 61
Query: 181 DAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQPSI 240
D +L ++F V+H A V ++ P Y +N++G + L E SI
Sbjct: 62 DREILRRIFAENRIDSVIHFAGLKAVGESVAEPMKYYDNNVSGSLVLAEEMARAGVF-SI 120
Query: 241 VWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEI---AHTYNHIYGLALTGLRF 297
V++SS++VYG +VP++E S Y A+K E I + + + L LR+
Sbjct: 121 VFSSSATVYGDPGKVPYTEDMPPGDTTSPYGASKSMVERILTDIQKADPRWSMIL--LRY 178
Query: 298 FTVYG----------PWGRPDMAYFFFTKDILQGKTI------DVYKTQDDREVARDFTY 341
F G P G P+ + + + GK D Y T D + RD+ +
Sbjct: 179 FNPIGAHESGLIGEQPNGIPNNLLPYICQ-VAAGKLPQLAVFGDDYPTPDGTGM-RDYIH 236
Query: 342 IDDVVKGCVGALDTAGKSTGSGGKKRGPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAK 401
+ D+ +G V A+ G+ + NLG+ GR S+LE + +A
Sbjct: 237 VMDLAEGHVAAMQAKSNVAGT----------HLLNLGS------GRASSVLEIIRAFEAA 280
Query: 402 K-----HVIRMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKW 445
+ ++ R GD+ +A+ S G++ DL + +W
Sbjct: 281 SGLTIPYEVKPRRAGDLACFYADPSYTKAQIGWQTQRDLTQMMEDSWRW 329
>sp|O65781|GALE2_CYATE UDP-glucose 4-epimerase GEPI48 OS=Cyamopsis tetragonoloba PE=2 SV=1
Length = 350
Score = 85.5 bits (210), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 147/349 (42%), Gaps = 42/349 (12%)
Query: 120 TVLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKL------LQKHQVF 173
TVLVTG AG++GSH L L G + +DN ++ + ++ R ++ L H++
Sbjct: 5 TVLVTGGAGYIGSHTVLQLLLGGFKAVVVDNLDNSSETAIHRVKELAGKFAGNLSFHKL- 63
Query: 174 IVEGDLNDAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKS 233
DL D L K+F F V+H A V ++Q P Y +N+ G + L EV +
Sbjct: 64 ----DLRDRDALEKIFSSTKFDSVIHFAGLKAVGESVQKPLLYYDNNLIGTIVLFEVM-A 118
Query: 234 VNPQPSIVWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAH-TYNHIYGLAL 292
+ +V++SS++VYGL +VP +E A+ Y TK EEI Y +
Sbjct: 119 AHGCKKLVFSSSATVYGLPKEVPCTEEFPL-SAANPYGRTKLIIEEICRDIYRAEQEWKI 177
Query: 293 TGLRFFTVYG----------PWGRPDMAYFFFTKDILQGK--TIDVYK---TQDDREVAR 337
LR+F G P G P+ F + + G+ + V+ T D R
Sbjct: 178 ILLRYFNPVGAHPSGYIGEDPRGIPN-NLMPFVQQVAVGRRPALTVFGNDYTTSDGTGVR 236
Query: 338 DFTYIDDVVKGCVGALDTAGKSTGSGGKKRGPA-QLRVYNLGNTSPVPVGRLVSILENLL 396
D+ ++ D+ G + AL K P VYNLG V +V E
Sbjct: 237 DYIHVVDLADGHIAALR----------KLNDPKIGCEVYNLGTGKGTSVLEMVKAFEQ-A 285
Query: 397 NTKAKKHVIRMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKW 445
+ K V+ R GD +A+ + A ++ +K + R W
Sbjct: 286 SGKKIPLVMAGRRPGDAEVVYASTNKAERELNWKAKYGIDEMCRDQWNW 334
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 186,793,136
Number of Sequences: 539616
Number of extensions: 8098283
Number of successful extensions: 56920
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 158
Number of HSP's successfully gapped in prelim test: 338
Number of HSP's that attempted gapping in prelim test: 54304
Number of HSP's gapped (non-prelim): 2345
length of query: 476
length of database: 191,569,459
effective HSP length: 121
effective length of query: 355
effective length of database: 126,275,923
effective search space: 44827952665
effective search space used: 44827952665
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)