Query 011842
Match_columns 476
No_of_seqs 317 out of 2940
Neff 8.4
Searched_HMMs 46136
Date Fri Mar 29 05:50:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011842.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011842hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02263 serine decarboxylase 100.0 4.4E-79 9.5E-84 622.7 45.8 433 44-476 38-470 (470)
2 PLN03032 serine decarboxylase; 100.0 2.4E-61 5.2E-66 486.3 40.4 372 75-446 2-373 (374)
3 PRK02769 histidine decarboxyla 100.0 4.5E-57 9.7E-62 458.4 41.9 364 82-448 8-371 (380)
4 PLN02590 probable tyrosine dec 100.0 3.9E-56 8.4E-61 465.3 38.3 386 59-454 84-537 (539)
5 PLN02880 tyrosine decarboxylas 100.0 2.9E-53 6.4E-58 443.6 35.4 382 60-451 37-486 (490)
6 KOG0629 Glutamate decarboxylas 100.0 3.6E-54 7.8E-59 416.8 22.5 414 14-448 20-508 (510)
7 PF00282 Pyridoxal_deC: Pyrido 100.0 2.2E-51 4.9E-56 416.1 30.8 323 72-404 10-372 (373)
8 TIGR03799 NOD_PanD_pyr putativ 100.0 2.2E-48 4.8E-53 407.6 35.6 334 60-404 48-437 (522)
9 COG0076 GadB Glutamate decarbo 100.0 3.3E-46 7.1E-51 384.7 32.8 325 72-406 31-381 (460)
10 TIGR01788 Glu-decarb-GAD gluta 100.0 1.9E-45 4.1E-50 378.2 37.9 364 72-450 15-430 (431)
11 TIGR03811 tyr_de_CO2_Ent tyros 100.0 2.8E-44 6.1E-49 379.3 32.5 322 74-404 55-501 (608)
12 KOG0628 Aromatic-L-amino-acid/ 100.0 3.4E-43 7.3E-48 344.4 27.3 384 60-453 28-475 (511)
13 cd06450 DOPA_deC_like DOPA dec 100.0 7.3E-36 1.6E-40 301.4 30.5 307 101-445 4-344 (345)
14 PRK13520 L-tyrosine decarboxyl 100.0 1.3E-34 2.9E-39 295.1 38.4 353 80-448 3-370 (371)
15 COG1104 NifS Cysteine sulfinat 100.0 2E-33 4.2E-38 277.2 34.3 320 110-452 15-380 (386)
16 TIGR03812 tyr_de_CO2_Arch tyro 100.0 4.7E-33 1E-37 284.1 37.7 350 81-446 2-373 (373)
17 COG0520 csdA Selenocysteine ly 100.0 3.8E-33 8.3E-38 284.6 35.8 299 134-448 61-404 (405)
18 KOG1383 Glutamate decarboxylas 100.0 6E-31 1.3E-35 259.2 29.8 375 72-458 54-455 (491)
19 PLN02651 cysteine desulfurase 100.0 2E-29 4.2E-34 256.7 31.4 281 136-437 40-364 (364)
20 TIGR03392 FeS_syn_CsdA cystein 100.0 1.8E-28 3.9E-33 252.6 35.7 296 137-449 58-395 (398)
21 TIGR02006 IscS cysteine desulf 100.0 1.7E-28 3.8E-33 253.0 35.5 292 138-450 46-378 (402)
22 PRK10874 cysteine sulfinate de 100.0 2.7E-28 5.9E-33 251.5 36.8 297 136-449 60-398 (401)
23 TIGR03402 FeS_nifS cysteine de 100.0 4.9E-28 1.1E-32 247.7 36.8 294 136-452 39-375 (379)
24 PRK09295 bifunctional cysteine 100.0 3.4E-28 7.3E-33 251.3 35.2 295 137-448 65-403 (406)
25 TIGR01979 sufS cysteine desulf 100.0 7E-28 1.5E-32 248.6 36.7 296 138-450 61-402 (403)
26 TIGR01977 am_tr_V_EF2568 cyste 100.0 1.1E-27 2.3E-32 244.8 33.3 290 138-445 43-375 (376)
27 PRK04366 glycine dehydrogenase 100.0 3.3E-27 7.3E-32 247.9 37.7 356 79-453 49-452 (481)
28 PRK02948 cysteine desulfurase; 100.0 2.4E-27 5.2E-32 242.8 35.9 295 136-452 40-377 (381)
29 cd06453 SufS_like Cysteine des 100.0 2.3E-27 5E-32 242.2 34.6 291 136-443 40-373 (373)
30 PLN02855 Bifunctional selenocy 100.0 3.3E-27 7.1E-32 245.2 35.8 296 138-450 75-419 (424)
31 TIGR03403 nifS_epsilon cystein 100.0 5.6E-27 1.2E-31 240.2 36.6 289 139-450 43-376 (382)
32 PRK09331 Sep-tRNA:Cys-tRNA syn 100.0 4.5E-27 9.8E-32 241.2 35.9 292 138-449 62-381 (387)
33 PF00266 Aminotran_5: Aminotra 100.0 6.8E-27 1.5E-31 238.7 34.0 287 136-439 40-371 (371)
34 cd06451 AGAT_like Alanine-glyo 100.0 6.3E-27 1.4E-31 237.4 32.4 294 136-447 29-355 (356)
35 TIGR01976 am_tr_V_VC1184 cyste 100.0 9.4E-27 2E-31 239.7 34.0 289 136-443 57-397 (397)
36 PLN02409 serine--glyoxylate am 100.0 1.5E-26 3.3E-31 238.3 33.5 300 136-450 39-373 (401)
37 TIGR02539 SepCysS Sep-tRNA:Cys 100.0 2.7E-26 5.8E-31 234.1 34.8 290 139-449 51-368 (370)
38 PRK14012 cysteine desulfurase; 100.0 3.4E-26 7.3E-31 236.2 35.5 291 139-450 49-380 (404)
39 COG0436 Aspartate/tyrosine/aro 100.0 1.4E-26 3E-31 236.6 30.6 292 136-449 66-391 (393)
40 KOG1549 Cysteine desulfurase N 100.0 1E-26 2.3E-31 230.3 28.1 292 137-451 83-420 (428)
41 TIGR00461 gcvP glycine dehydro 100.0 4.6E-26 1E-30 248.5 35.9 357 80-452 467-870 (939)
42 COG0156 BioF 7-keto-8-aminopel 100.0 8.9E-27 1.9E-31 233.9 27.2 325 88-446 38-387 (388)
43 PRK05367 glycine dehydrogenase 100.0 8.8E-26 1.9E-30 250.4 36.4 352 80-452 479-878 (954)
44 cd06452 SepCysS Sep-tRNA:Cys-t 100.0 1.4E-25 2.9E-30 228.3 33.7 287 140-447 45-360 (361)
45 TIGR02326 transamin_PhnW 2-ami 100.0 2.1E-25 4.6E-30 227.0 33.4 296 137-447 33-360 (363)
46 cd00613 GDC-P Glycine cleavage 100.0 1.8E-25 3.9E-30 230.2 33.2 292 135-443 60-398 (398)
47 PRK00451 glycine dehydrogenase 100.0 2E-25 4.2E-30 233.5 33.3 349 73-447 42-446 (447)
48 TIGR01814 kynureninase kynuren 99.9 2E-25 4.3E-30 230.6 31.0 292 139-447 71-405 (406)
49 TIGR03531 selenium_SpcS O-phos 99.9 2.9E-25 6.3E-30 227.8 30.4 295 73-387 29-344 (444)
50 PLN02414 glycine dehydrogenase 99.9 5.4E-25 1.2E-29 243.0 32.8 303 134-452 563-910 (993)
51 TIGR03301 PhnW-AepZ 2-aminoeth 99.9 2.5E-24 5.4E-29 217.9 34.4 294 138-446 30-354 (355)
52 PRK13479 2-aminoethylphosphona 99.9 4.5E-24 9.7E-29 217.6 33.9 299 137-450 35-364 (368)
53 TIGR01822 2am3keto_CoA 2-amino 99.9 2.1E-24 4.5E-29 221.9 31.1 286 138-449 82-389 (393)
54 TIGR03235 DNA_S_dndA cysteine 99.9 1.5E-24 3.3E-29 219.9 29.5 250 137-405 40-301 (353)
55 PRK07179 hypothetical protein; 99.9 4.1E-24 8.9E-29 220.9 30.7 280 140-449 100-398 (407)
56 PLN02724 Molybdenum cofactor s 99.9 2.4E-24 5.2E-29 238.9 30.5 339 99-447 37-486 (805)
57 cd06454 KBL_like KBL_like; thi 99.9 6.2E-24 1.3E-28 214.6 30.7 325 91-446 3-348 (349)
58 PLN02955 8-amino-7-oxononanoat 99.9 3.1E-24 6.7E-29 220.3 27.9 324 88-449 101-461 (476)
59 PTZ00094 serine hydroxymethylt 99.9 9.8E-24 2.1E-28 220.5 30.6 293 137-449 78-408 (452)
60 TIGR01821 5aminolev_synth 5-am 99.9 3E-23 6.4E-28 214.1 31.3 331 90-450 46-397 (402)
61 COG0075 Serine-pyruvate aminot 99.9 7.7E-23 1.7E-27 203.7 32.2 301 136-452 35-366 (383)
62 PRK09064 5-aminolevulinate syn 99.9 7.8E-23 1.7E-27 211.3 31.8 331 90-450 47-398 (407)
63 PRK03080 phosphoserine aminotr 99.9 2.9E-23 6.3E-28 212.2 28.1 289 136-451 45-375 (378)
64 PRK06108 aspartate aminotransf 99.9 1.1E-22 2.4E-27 208.3 30.8 289 136-447 62-380 (382)
65 PLN02483 serine palmitoyltrans 99.9 9.5E-23 2E-27 214.4 30.8 333 89-450 100-467 (489)
66 PRK13393 5-aminolevulinate syn 99.9 1.9E-22 4.2E-27 208.3 32.3 331 89-449 45-396 (406)
67 cd00609 AAT_like Aspartate ami 99.9 2.3E-22 4.9E-27 202.4 30.8 289 136-444 37-349 (350)
68 cd06502 TA_like Low-specificit 99.9 1.9E-23 4.1E-28 210.2 22.7 284 139-445 32-337 (338)
69 PRK13392 5-aminolevulinate syn 99.9 2.1E-22 4.5E-27 208.4 30.0 287 139-450 91-398 (410)
70 PLN00175 aminotransferase fami 99.9 5.4E-22 1.2E-26 205.2 32.1 291 135-448 91-412 (413)
71 PRK08361 aspartate aminotransf 99.9 3.4E-22 7.4E-27 205.5 30.4 291 136-448 71-389 (391)
72 KOG1359 Glycine C-acetyltransf 99.9 4.7E-23 1E-27 192.0 21.2 327 88-449 66-412 (417)
73 PRK05937 8-amino-7-oxononanoat 99.9 4.4E-22 9.6E-27 203.1 29.5 327 91-450 6-351 (370)
74 PRK06207 aspartate aminotransf 99.9 1.9E-21 4.1E-26 200.8 34.4 292 136-449 79-402 (405)
75 PLN02721 threonine aldolase 99.9 1.3E-22 2.8E-27 205.4 24.6 285 142-448 43-351 (353)
76 PRK07681 aspartate aminotransf 99.9 2.4E-21 5.1E-26 199.8 33.6 289 136-446 70-385 (399)
77 PRK09082 methionine aminotrans 99.9 7.8E-22 1.7E-26 202.5 28.9 287 136-445 68-385 (386)
78 PRK13580 serine hydroxymethylt 99.9 1.3E-21 2.9E-26 201.2 30.2 295 136-450 92-446 (493)
79 PRK06939 2-amino-3-ketobutyrat 99.9 3.2E-21 7E-26 198.3 33.2 288 136-449 84-393 (397)
80 PRK08912 hypothetical protein; 99.9 2.8E-21 6.1E-26 198.4 32.4 291 136-448 64-385 (387)
81 PRK06290 aspartate aminotransf 99.9 2.5E-21 5.4E-26 200.0 31.8 292 136-449 82-405 (410)
82 PRK07309 aromatic amino acid a 99.9 4.2E-21 9.1E-26 197.4 33.4 295 136-450 68-389 (391)
83 PRK05957 aspartate aminotransf 99.9 8.9E-21 1.9E-25 194.8 35.5 297 135-452 65-388 (389)
84 PTZ00377 alanine aminotransfer 99.9 2.8E-21 6E-26 203.8 32.5 298 135-452 115-478 (481)
85 PLN00145 tyrosine/nicotianamin 99.9 2.9E-21 6.3E-26 200.7 32.1 295 137-451 96-426 (430)
86 PLN03226 serine hydroxymethylt 99.9 4.2E-21 9.2E-26 200.4 33.0 299 137-450 78-420 (475)
87 cd00611 PSAT_like Phosphoserin 99.9 6.1E-22 1.3E-26 200.8 26.0 287 136-446 41-353 (355)
88 PRK07682 hypothetical protein; 99.9 2.9E-21 6.3E-26 197.6 30.5 290 136-449 58-376 (378)
89 PLN02187 rooty/superroot1 99.9 3.5E-21 7.5E-26 201.6 31.6 298 136-453 109-442 (462)
90 PRK07324 transaminase; Validat 99.9 2.5E-21 5.3E-26 197.8 29.7 284 137-449 64-370 (373)
91 KOG1360 5-aminolevulinate synt 99.9 2.1E-21 4.5E-26 187.7 26.7 288 139-450 216-525 (570)
92 PRK12566 glycine dehydrogenase 99.9 6.5E-21 1.4E-25 207.1 33.1 303 135-452 539-879 (954)
93 PLN02656 tyrosine transaminase 99.9 6.2E-21 1.3E-25 197.2 31.7 291 136-449 74-403 (409)
94 PRK12414 putative aminotransfe 99.9 3.5E-21 7.6E-26 197.5 29.5 287 136-445 67-383 (384)
95 PLN03227 serine palmitoyltrans 99.9 9.6E-21 2.1E-25 194.4 32.5 326 93-450 2-383 (392)
96 PRK05958 8-amino-7-oxononanoat 99.9 1.2E-20 2.6E-25 193.2 33.2 281 139-446 84-384 (385)
97 PRK05764 aspartate aminotransf 99.9 8.4E-21 1.8E-25 195.2 32.0 291 136-449 69-391 (393)
98 PRK13034 serine hydroxymethylt 99.9 1.1E-20 2.3E-25 195.5 32.4 288 137-448 72-391 (416)
99 TIGR00858 bioF 8-amino-7-oxono 99.9 5.5E-21 1.2E-25 193.7 29.8 279 139-444 61-360 (360)
100 PRK08960 hypothetical protein; 99.9 1.2E-20 2.7E-25 193.6 32.6 287 136-446 70-384 (387)
101 PLN02822 serine palmitoyltrans 99.9 5E-21 1.1E-25 201.0 30.2 288 137-451 152-479 (481)
102 TIGR03540 DapC_direct LL-diami 99.9 1.6E-20 3.6E-25 192.5 32.9 287 136-444 68-381 (383)
103 KOG0257 Kynurenine aminotransf 99.9 3.4E-21 7.3E-26 188.9 26.0 256 134-405 68-344 (420)
104 PRK07777 aminotransferase; Val 99.9 1.5E-20 3.2E-25 193.0 32.3 292 136-447 62-384 (387)
105 PRK13355 bifunctional HTH-doma 99.9 5.8E-21 1.3E-25 203.0 29.7 325 98-450 151-515 (517)
106 PRK05942 aspartate aminotransf 99.9 1.6E-20 3.5E-25 193.3 31.9 285 136-446 74-386 (394)
107 TIGR01364 serC_1 phosphoserine 99.9 8.2E-21 1.8E-25 191.6 29.0 285 136-448 34-347 (349)
108 PRK03317 histidinol-phosphate 99.9 1.6E-20 3.6E-25 191.4 31.5 286 137-449 67-364 (368)
109 cd00378 SHMT Serine-glycine hy 99.9 1.1E-20 2.5E-25 194.8 30.6 287 136-448 62-384 (402)
110 PRK08636 aspartate aminotransf 99.9 3.5E-20 7.6E-25 191.3 34.2 295 136-449 72-400 (403)
111 PRK09276 LL-diaminopimelate am 99.9 2E-20 4.4E-25 191.9 32.1 287 136-444 70-383 (385)
112 COG2008 GLY1 Threonine aldolas 99.9 1.6E-21 3.5E-26 189.0 22.3 287 138-447 34-341 (342)
113 PRK05355 3-phosphoserine/phosp 99.9 8.2E-21 1.8E-25 192.5 28.3 285 136-448 45-357 (360)
114 PRK09148 aminotransferase; Val 99.9 5.1E-20 1.1E-24 190.2 33.8 296 136-451 69-392 (405)
115 TIGR01825 gly_Cac_T_rel pyrido 99.9 3.1E-20 6.7E-25 190.4 31.8 287 136-449 75-381 (385)
116 PRK07366 succinyldiaminopimela 99.9 2.4E-20 5.3E-25 191.5 31.0 289 136-446 69-387 (388)
117 PRK14807 histidinol-phosphate 99.9 3.5E-20 7.5E-25 187.8 31.5 272 145-446 65-349 (351)
118 PLN00143 tyrosine/nicotianamin 99.9 4.3E-20 9.4E-25 190.9 31.3 299 136-451 75-406 (409)
119 PRK07337 aminotransferase; Val 99.9 5.6E-20 1.2E-24 188.8 32.0 285 136-445 68-385 (388)
120 PRK06348 aspartate aminotransf 99.9 9.1E-20 2E-24 187.0 33.0 288 136-446 67-382 (384)
121 PRK05387 histidinol-phosphate 99.9 3.3E-20 7.1E-25 188.0 29.4 274 143-448 64-352 (353)
122 PRK07550 hypothetical protein; 99.9 8.7E-20 1.9E-24 187.3 32.8 290 136-446 68-384 (386)
123 PRK04870 histidinol-phosphate 99.9 4.4E-20 9.5E-25 187.4 30.0 273 144-446 68-355 (356)
124 PRK09147 succinyldiaminopimela 99.9 6.2E-20 1.3E-24 189.0 31.4 289 136-447 66-394 (396)
125 TIGR01141 hisC histidinol-phos 99.9 1.2E-20 2.5E-25 190.8 25.5 272 143-444 58-346 (346)
126 PRK08068 transaminase; Reviewe 99.9 6.8E-20 1.5E-24 188.3 31.5 286 136-444 71-384 (389)
127 PRK15481 transcriptional regul 99.9 6E-20 1.3E-24 191.2 31.4 286 136-448 122-430 (431)
128 PTZ00433 tyrosine aminotransfe 99.9 9E-20 1.9E-24 188.8 32.3 292 137-451 77-410 (412)
129 PRK00011 glyA serine hydroxyme 99.9 7.2E-20 1.6E-24 189.8 31.7 286 137-448 69-388 (416)
130 PRK08363 alanine aminotransfer 99.9 8.2E-20 1.8E-24 188.3 30.7 295 135-449 70-394 (398)
131 TIGR01265 tyr_nico_aTase tyros 99.9 4.2E-19 9.1E-24 183.3 36.0 290 136-448 74-400 (403)
132 TIGR01437 selA_rel uncharacter 99.9 8.1E-20 1.8E-24 185.7 30.1 279 137-446 43-362 (363)
133 PRK06107 aspartate aminotransf 99.9 6.9E-20 1.5E-24 189.0 30.1 292 136-449 71-400 (402)
134 PRK07683 aminotransferase A; V 99.9 1.5E-19 3.3E-24 185.5 32.4 290 136-449 66-383 (387)
135 COG1103 Archaea-specific pyrid 99.9 6.4E-20 1.4E-24 169.5 26.2 285 144-449 66-380 (382)
136 PRK08175 aminotransferase; Val 99.9 3.1E-19 6.7E-24 183.8 34.6 293 136-448 68-388 (395)
137 TIGR03537 DapC succinyldiamino 99.9 2.1E-19 4.5E-24 182.1 32.0 286 136-445 37-349 (350)
138 PRK13238 tnaA tryptophanase/L- 99.9 1.6E-19 3.4E-24 188.2 31.3 292 136-449 79-433 (460)
139 TIGR03538 DapC_gpp succinyldia 99.9 2.3E-19 4.9E-24 184.7 32.2 287 136-445 65-391 (393)
140 cd00615 Orn_deC_like Ornithine 99.9 1.2E-20 2.6E-25 186.5 21.7 227 139-386 59-294 (294)
141 PRK06225 aspartate aminotransf 99.9 3.6E-19 7.7E-24 182.4 33.3 281 143-451 70-378 (380)
142 PLN02368 alanine transaminase 99.9 5E-20 1.1E-24 189.5 26.3 327 55-410 36-401 (407)
143 PRK09105 putative aminotransfe 99.9 1.8E-19 4E-24 183.7 29.5 270 144-447 83-368 (370)
144 PLN02231 alanine transaminase 99.9 7E-19 1.5E-23 186.5 34.2 331 103-452 136-530 (534)
145 PRK09265 aminotransferase AlaT 99.9 3.3E-19 7.2E-24 184.1 30.2 294 136-450 73-402 (404)
146 cd00616 AHBA_syn 3-amino-5-hyd 99.9 1.3E-19 2.7E-24 183.5 26.5 280 141-444 20-352 (352)
147 PLN03026 histidinol-phosphate 99.9 1.8E-19 3.9E-24 184.5 28.0 274 143-446 90-379 (380)
148 TIGR01264 tyr_amTase_E tyrosin 99.9 6.9E-19 1.5E-23 181.6 32.4 290 136-449 74-399 (401)
149 PRK00950 histidinol-phosphate 99.9 8E-20 1.7E-24 185.8 25.0 271 143-447 73-360 (361)
150 PRK06836 aspartate aminotransf 99.9 1.1E-18 2.3E-23 179.7 33.2 293 136-449 74-391 (394)
151 PRK08153 histidinol-phosphate 99.9 6.1E-19 1.3E-23 180.0 30.6 278 139-451 71-367 (369)
152 PRK02731 histidinol-phosphate 99.9 2.5E-19 5.5E-24 182.5 27.8 275 144-448 72-365 (367)
153 PRK07908 hypothetical protein; 99.9 5.8E-19 1.3E-23 178.7 29.8 266 145-448 64-346 (349)
154 PRK06855 aminotransferase; Val 99.9 1.1E-18 2.4E-23 181.6 32.5 294 136-450 74-430 (433)
155 PRK01533 histidinol-phosphate 99.9 4.8E-19 1.1E-23 180.3 29.0 276 138-448 67-354 (366)
156 PRK04635 histidinol-phosphate 99.9 1.3E-19 2.9E-24 183.8 24.8 270 145-445 66-351 (354)
157 PRK03158 histidinol-phosphate 99.9 2.7E-19 5.9E-24 181.8 27.1 276 137-446 66-358 (359)
158 cd00614 CGS_like CGS_like: Cys 99.9 1.6E-19 3.4E-24 184.2 25.2 267 139-447 40-368 (369)
159 PRK01688 histidinol-phosphate 99.9 8.8E-20 1.9E-24 184.9 23.2 272 142-444 60-351 (351)
160 TIGR03576 pyridox_MJ0158 pyrid 99.9 5.1E-19 1.1E-23 178.4 28.6 270 138-446 53-344 (346)
161 PRK07568 aspartate aminotransf 99.8 3.2E-18 6.9E-23 176.3 34.1 292 136-451 67-394 (397)
162 PRK08056 threonine-phosphate d 99.8 9.9E-19 2.1E-23 177.6 29.2 274 143-447 59-353 (356)
163 TIGR01366 serC_3 phosphoserine 99.8 4.4E-19 9.5E-24 180.1 25.9 286 136-449 38-360 (361)
164 PF00155 Aminotran_1_2: Aminot 99.8 2.7E-19 5.9E-24 181.9 24.0 291 136-443 45-363 (363)
165 PRK02610 histidinol-phosphate 99.8 4.7E-18 1E-22 173.8 32.4 289 136-449 67-371 (374)
166 PLN02376 1-aminocyclopropane-1 99.8 3.3E-18 7.2E-23 180.3 30.9 294 136-449 95-438 (496)
167 PRK08133 O-succinylhomoserine 99.8 1.3E-18 2.8E-23 178.4 26.7 213 139-389 61-279 (390)
168 PRK06767 methionine gamma-lyas 99.8 1.9E-18 4.1E-23 177.1 27.7 265 142-448 64-384 (386)
169 COG1167 ARO8 Transcriptional r 99.8 5.8E-18 1.2E-22 176.9 31.7 332 101-451 97-457 (459)
170 PRK08861 cystathionine gamma-s 99.8 2.2E-18 4.7E-23 176.0 27.6 269 142-452 56-386 (388)
171 PLN02242 methionine gamma-lyas 99.8 1.6E-18 3.4E-23 178.9 26.4 220 139-393 76-303 (418)
172 cd00617 Tnase_like Tryptophana 99.8 6.1E-18 1.3E-22 174.2 30.2 292 136-449 54-408 (431)
173 KOG0259 Tyrosine aminotransfer 99.8 1.3E-17 2.7E-22 161.3 30.2 348 80-451 43-435 (447)
174 cd00610 OAT_like Acetyl ornith 99.8 9.6E-18 2.1E-22 173.5 31.4 290 138-446 78-412 (413)
175 PTZ00376 aspartate aminotransf 99.8 2.9E-18 6.3E-23 177.1 27.3 300 135-448 72-402 (404)
176 PLN02271 serine hydroxymethylt 99.8 7.7E-18 1.7E-22 174.1 30.1 297 137-448 192-539 (586)
177 PRK03321 putative aminotransfe 99.8 1.3E-18 2.9E-23 176.3 24.0 278 138-448 60-350 (352)
178 KOG1357 Serine palmitoyltransf 99.8 3.9E-19 8.5E-24 174.9 19.2 329 92-449 139-502 (519)
179 KOG2862 Alanine-glyoxylate ami 99.8 1.4E-17 2.9E-22 157.1 28.6 297 136-449 47-382 (385)
180 PRK05166 histidinol-phosphate 99.8 3E-18 6.5E-23 175.0 26.4 276 143-447 75-369 (371)
181 PLN02450 1-aminocyclopropane-1 99.8 9.3E-18 2E-22 176.0 30.3 295 136-451 87-432 (468)
182 PRK07590 L,L-diaminopimelate a 99.8 7.4E-18 1.6E-22 174.4 29.1 290 136-446 77-408 (409)
183 PRK06425 histidinol-phosphate 99.8 6.4E-18 1.4E-22 169.9 27.7 269 143-447 44-331 (332)
184 PRK05968 hypothetical protein; 99.8 9E-18 1.9E-22 172.2 27.6 267 141-446 65-387 (389)
185 PRK08114 cystathionine beta-ly 99.8 6.7E-18 1.5E-22 171.8 26.2 210 142-390 65-283 (395)
186 PRK06358 threonine-phosphate d 99.8 1.5E-17 3.2E-22 168.8 28.5 275 138-447 57-353 (354)
187 PRK09257 aromatic amino acid a 99.8 9.5E-18 2.1E-22 172.8 27.5 293 135-446 69-395 (396)
188 PLN02509 cystathionine beta-ly 99.8 6.3E-18 1.4E-22 175.5 26.1 212 139-389 133-351 (464)
189 PRK10534 L-threonine aldolase; 99.8 3.7E-18 8.1E-23 171.6 23.8 280 136-447 35-331 (333)
190 TIGR01328 met_gam_lyase methio 99.8 6.8E-18 1.5E-22 173.1 26.0 210 143-389 63-279 (391)
191 PRK04781 histidinol-phosphate 99.8 1.5E-17 3.3E-22 169.4 28.2 276 143-447 63-361 (364)
192 PRK05839 hypothetical protein; 99.8 3.1E-17 6.7E-22 167.7 30.5 283 136-447 61-372 (374)
193 PRK06234 methionine gamma-lyas 99.8 1.3E-17 2.8E-22 171.7 27.5 213 136-389 65-286 (400)
194 PRK08249 cystathionine gamma-s 99.8 9.5E-18 2.1E-22 172.3 26.5 214 139-390 64-283 (398)
195 COG1168 MalY Bifunctional PLP- 99.8 4.1E-17 8.8E-22 158.9 29.1 314 81-448 40-385 (388)
196 PRK08776 cystathionine gamma-s 99.8 2.1E-17 4.6E-22 170.0 28.8 213 140-390 61-280 (405)
197 PRK09028 cystathionine beta-ly 99.8 1.6E-17 3.4E-22 169.6 27.4 208 144-389 66-279 (394)
198 PRK08134 O-acetylhomoserine am 99.8 1.2E-17 2.5E-22 173.0 26.8 220 140-389 65-315 (433)
199 PRK05367 glycine dehydrogenase 99.8 4.4E-17 9.6E-22 181.4 33.2 334 78-444 57-437 (954)
200 PRK09275 aspartate aminotransf 99.8 1.3E-17 2.9E-22 174.9 27.4 204 101-323 108-328 (527)
201 PRK07050 cystathionine beta-ly 99.8 5.6E-18 1.2E-22 173.8 24.0 261 142-446 68-336 (394)
202 COG1003 GcvP Glycine cleavage 99.8 2.7E-17 5.8E-22 161.7 27.5 302 133-454 103-452 (496)
203 TIGR01329 cysta_beta_ly_E cyst 99.8 1.4E-17 3.1E-22 170.0 26.7 210 141-389 49-265 (378)
204 PRK03244 argD acetylornithine 99.8 7.1E-17 1.5E-21 166.4 32.0 282 141-450 87-395 (398)
205 PLN02397 aspartate transaminas 99.8 5.7E-17 1.2E-21 168.3 31.4 293 134-447 90-419 (423)
206 TIGR01324 cysta_beta_ly_B cyst 99.8 1.5E-17 3.3E-22 169.4 26.5 209 143-389 54-268 (377)
207 TIGR03801 asp_4_decarbox aspar 99.8 5.4E-17 1.2E-21 170.1 31.2 206 99-323 100-327 (521)
208 PRK06460 hypothetical protein; 99.8 1.2E-17 2.6E-22 170.5 25.7 270 139-450 45-375 (376)
209 PRK07865 N-succinyldiaminopime 99.8 3.4E-17 7.4E-22 166.8 28.7 275 136-444 63-363 (364)
210 TIGR01140 L_thr_O3P_dcar L-thr 99.8 1.4E-17 3.1E-22 167.3 25.5 261 142-443 50-329 (330)
211 PLN02414 glycine dehydrogenase 99.8 1E-16 2.2E-21 177.8 34.2 336 78-445 84-465 (993)
212 PRK08574 cystathionine gamma-s 99.8 9.3E-18 2E-22 171.7 24.2 209 142-389 56-271 (385)
213 KOG1368 Threonine aldolase [Am 99.8 3.1E-18 6.7E-23 160.4 18.6 283 136-446 57-365 (384)
214 PRK08247 cystathionine gamma-s 99.8 1.6E-17 3.5E-22 169.1 25.6 226 141-405 54-288 (366)
215 PRK07810 O-succinylhomoserine 99.8 1.8E-17 3.9E-22 170.5 26.2 211 141-389 72-289 (403)
216 PLN02672 methionine S-methyltr 99.8 6.7E-17 1.4E-21 179.6 32.3 288 138-447 733-1078(1082)
217 PRK08064 cystathionine beta-ly 99.8 1.6E-17 3.4E-22 170.4 25.5 269 139-446 54-383 (390)
218 PF01276 OKR_DC_1: Orn/Lys/Arg 99.8 4.7E-18 1E-22 172.1 20.8 228 139-386 66-316 (417)
219 PRK14809 histidinol-phosphate 99.8 7.5E-17 1.6E-21 163.8 29.9 273 137-447 67-355 (357)
220 PRK11658 UDP-4-amino-4-deoxy-L 99.8 3.9E-17 8.5E-22 167.1 27.9 283 137-447 35-377 (379)
221 PRK09440 avtA valine--pyruvate 99.8 9.6E-17 2.1E-21 166.4 30.2 330 100-452 37-414 (416)
222 PRK07811 cystathionine gamma-s 99.8 4.5E-17 9.8E-22 167.0 27.2 209 143-389 65-280 (388)
223 TIGR01325 O_suc_HS_sulf O-succ 99.8 3.5E-17 7.6E-22 167.4 26.4 211 141-389 56-272 (380)
224 TIGR02080 O_succ_thio_ly O-suc 99.8 4E-17 8.6E-22 166.8 26.4 212 141-390 53-271 (382)
225 PRK08045 cystathionine gamma-s 99.8 5.7E-17 1.2E-21 165.8 27.4 212 141-390 54-272 (386)
226 PRK07504 O-succinylhomoserine 99.8 3.7E-17 8E-22 168.1 26.1 210 142-389 68-284 (398)
227 PRK03967 histidinol-phosphate 99.8 1.3E-16 2.8E-21 160.8 29.1 271 137-449 57-334 (337)
228 TIGR03588 PseC UDP-4-keto-6-de 99.8 1.1E-16 2.4E-21 164.0 29.0 282 143-446 33-379 (380)
229 TIGR03539 DapC_actino succinyl 99.8 2.9E-16 6.3E-21 159.5 31.8 274 136-443 57-356 (357)
230 PLN02607 1-aminocyclopropane-1 99.8 1.2E-16 2.5E-21 166.6 29.4 293 136-450 96-438 (447)
231 PRK15029 arginine decarboxylas 99.8 2.3E-16 5E-21 170.6 32.3 228 139-388 205-465 (755)
232 TIGR00707 argD acetylornithine 99.8 1.7E-16 3.7E-21 162.4 29.4 282 139-446 69-378 (379)
233 PRK00854 rocD ornithine--oxo-a 99.8 1.8E-16 3.8E-21 163.7 29.5 278 139-447 83-399 (401)
234 PRK07503 methionine gamma-lyas 99.8 1.2E-16 2.7E-21 164.5 28.0 212 142-389 68-285 (403)
235 PRK08248 O-acetylhomoserine am 99.8 8.5E-17 1.8E-21 166.6 26.0 219 141-389 66-315 (431)
236 PRK08637 hypothetical protein; 99.8 1.8E-16 3.8E-21 162.9 28.2 299 136-449 45-386 (388)
237 PRK14808 histidinol-phosphate 99.8 2.8E-16 6.1E-21 158.2 29.1 266 138-445 59-333 (335)
238 PRK07392 threonine-phosphate d 99.8 4.2E-16 9E-21 158.6 30.5 275 138-447 60-357 (360)
239 PRK07812 O-acetylhomoserine am 99.8 1.8E-16 3.9E-21 164.0 27.9 220 141-389 71-319 (436)
240 PRK07582 cystathionine gamma-l 99.8 1.1E-16 2.4E-21 162.8 25.9 263 137-445 53-365 (366)
241 PRK05613 O-acetylhomoserine am 99.8 9E-17 2E-21 166.3 25.4 222 139-389 69-324 (437)
242 PRK04073 rocD ornithine--oxo-a 99.8 3.2E-16 6.8E-21 161.5 29.3 278 139-447 82-395 (396)
243 PRK07505 hypothetical protein; 99.8 6.4E-16 1.4E-20 159.6 30.9 281 138-448 90-398 (402)
244 PRK05664 threonine-phosphate d 99.8 4.1E-16 8.9E-21 156.7 28.7 263 143-449 53-328 (330)
245 COG0079 HisC Histidinol-phosph 99.8 1.4E-15 3E-20 153.3 32.2 272 144-449 62-354 (356)
246 PRK07269 cystathionine gamma-s 99.8 9.5E-17 2.1E-21 162.9 23.9 227 137-406 56-289 (364)
247 TIGR03542 DAPAT_plant LL-diami 99.8 4.9E-16 1.1E-20 160.4 29.6 288 136-446 76-401 (402)
248 COG0399 WecE Predicted pyridox 99.8 3.4E-16 7.4E-21 156.5 27.1 282 136-448 35-372 (374)
249 PRK07671 cystathionine beta-ly 99.8 1.8E-16 3.8E-21 161.9 25.2 211 140-389 51-268 (377)
250 PRK05994 O-acetylhomoserine am 99.8 1.8E-16 3.8E-21 164.3 25.4 218 142-389 66-314 (427)
251 cd01494 AAT_I Aspartate aminot 99.8 2.6E-17 5.7E-22 147.8 16.8 164 142-321 3-170 (170)
252 PRK06176 cystathionine gamma-s 99.8 3.7E-16 8E-21 159.6 26.9 210 141-389 52-268 (380)
253 PRK05939 hypothetical protein; 99.8 4.1E-16 8.9E-21 160.0 27.3 217 142-389 50-286 (397)
254 PRK05967 cystathionine beta-ly 99.8 4E-16 8.8E-21 159.0 27.0 214 138-389 63-282 (395)
255 TIGR01885 Orn_aminotrans ornit 99.8 1.2E-15 2.7E-20 157.3 30.9 281 139-447 79-400 (401)
256 TIGR03246 arg_catab_astC succi 99.8 1E-15 2.2E-20 157.6 29.9 281 139-449 77-395 (397)
257 TIGR02379 ECA_wecE TDP-4-keto- 99.8 1.1E-15 2.4E-20 155.9 29.8 226 139-387 31-271 (376)
258 PRK06084 O-acetylhomoserine am 99.8 5.7E-16 1.2E-20 160.3 27.7 217 143-389 62-310 (425)
259 PTZ00125 ornithine aminotransf 99.7 1.9E-15 4.1E-20 155.9 30.9 284 139-451 73-397 (400)
260 TIGR01326 OAH_OAS_sulfhy OAH/O 99.7 5.4E-16 1.2E-20 160.5 26.8 217 142-389 60-307 (418)
261 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.7 1.1E-15 2.5E-20 156.2 28.6 227 139-388 31-271 (375)
262 PLN02452 phosphoserine transam 99.7 1.5E-15 3.2E-20 153.7 28.7 317 103-448 13-362 (365)
263 COG0112 GlyA Glycine/serine hy 99.7 1.4E-15 3.1E-20 148.7 26.8 289 137-449 70-390 (413)
264 PRK15399 lysine decarboxylase 99.7 4.8E-15 1E-19 158.8 33.2 227 139-388 195-443 (713)
265 PRK01278 argD acetylornithine 99.7 3.3E-15 7.2E-20 153.6 30.1 285 139-449 73-388 (389)
266 TIGR01365 serC_2 phosphoserine 99.7 6.8E-16 1.5E-20 156.3 24.4 285 136-447 36-371 (374)
267 PRK15400 lysine decarboxylase 99.7 1.6E-15 3.5E-20 162.4 27.9 225 139-388 195-443 (714)
268 PRK02936 argD acetylornithine 99.7 3.7E-15 8.1E-20 152.5 29.7 279 138-446 70-376 (377)
269 PRK06959 putative threonine-ph 99.7 3.5E-15 7.6E-20 150.5 28.9 267 142-452 56-336 (339)
270 PRK07049 methionine gamma-lyas 99.7 1.7E-15 3.7E-20 156.9 27.2 212 143-388 87-312 (427)
271 PRK02627 acetylornithine amino 99.7 5.2E-15 1.1E-19 152.3 30.4 287 138-450 80-395 (396)
272 PRK05093 argD bifunctional N-s 99.7 6.7E-15 1.5E-19 152.0 30.9 280 139-450 82-401 (403)
273 PRK13578 ornithine decarboxyla 99.7 6.8E-15 1.5E-19 157.8 29.5 174 139-324 174-372 (720)
274 PRK12381 bifunctional succinyl 99.7 2.1E-14 4.6E-19 148.3 31.4 286 139-455 81-405 (406)
275 PF00464 SHMT: Serine hydroxym 99.7 8.1E-16 1.8E-20 155.3 20.2 286 136-443 63-399 (399)
276 PRK04311 selenocysteine syntha 99.7 1.6E-14 3.5E-19 150.1 30.4 281 141-447 129-462 (464)
277 PRK06702 O-acetylhomoserine am 99.7 6.9E-15 1.5E-19 151.6 27.1 219 142-389 64-312 (432)
278 PRK08354 putative aminotransfe 99.7 9.9E-15 2.2E-19 145.4 26.9 148 144-320 45-196 (311)
279 PRK15407 lipopolysaccharide bi 99.7 1.9E-14 4.1E-19 149.6 29.6 225 143-388 67-329 (438)
280 PF01212 Beta_elim_lyase: Beta 99.7 4.7E-17 1E-21 159.4 8.7 243 139-401 29-284 (290)
281 TIGR02618 tyr_phenol_ly tyrosi 99.7 1.8E-14 3.9E-19 146.7 27.3 290 136-449 72-426 (450)
282 PRK12462 phosphoserine aminotr 99.7 3.1E-14 6.6E-19 142.9 27.9 318 103-448 10-361 (364)
283 PF01053 Cys_Met_Meta_PP: Cys/ 99.7 2E-14 4.3E-19 146.2 26.1 274 128-447 47-385 (386)
284 PRK03715 argD acetylornithine 99.7 6.1E-14 1.3E-18 144.1 30.0 284 138-450 77-394 (395)
285 PLN02624 ornithine-delta-amino 99.7 1.2E-13 2.5E-18 145.2 31.4 284 139-450 117-445 (474)
286 PRK05964 adenosylmethionine--8 99.7 8.9E-14 1.9E-18 144.5 30.0 293 139-449 85-422 (423)
287 PF01041 DegT_DnrJ_EryC1: DegT 99.7 1.2E-14 2.5E-19 148.1 23.0 225 136-391 26-264 (363)
288 PRK06434 cystathionine gamma-l 99.7 1.9E-14 4.1E-19 146.6 24.0 261 142-447 67-382 (384)
289 COG3844 Kynureninase [Amino ac 99.7 4.9E-14 1.1E-18 134.1 24.4 291 138-450 75-403 (407)
290 PF02347 GDC-P: Glycine cleava 99.6 1.8E-13 4E-18 138.8 29.3 336 79-443 47-429 (429)
291 PRK13237 tyrosine phenol-lyase 99.6 1.6E-13 3.6E-18 140.0 28.9 290 136-449 79-433 (460)
292 PRK04260 acetylornithine amino 99.6 3.7E-13 8E-18 137.7 31.5 281 139-446 70-374 (375)
293 TIGR00474 selA seryl-tRNA(sec) 99.6 5.4E-14 1.2E-18 145.8 23.7 171 140-329 123-309 (454)
294 COG4992 ArgD Ornithine/acetylo 99.6 2.4E-13 5.2E-18 134.9 26.5 284 139-451 84-400 (404)
295 PRK08117 4-aminobutyrate amino 99.6 1.1E-12 2.5E-17 136.6 32.1 292 139-450 86-430 (433)
296 PRK00062 glutamate-1-semialdeh 99.6 3.9E-13 8.4E-18 139.7 28.0 284 139-450 90-425 (426)
297 TIGR00461 gcvP glycine dehydro 99.6 1.4E-12 3E-17 143.5 32.8 334 80-444 47-426 (939)
298 TIGR00713 hemL glutamate-1-sem 99.6 5.8E-13 1.2E-17 138.5 28.4 284 140-449 89-422 (423)
299 COG0001 HemL Glutamate-1-semia 99.6 2.5E-12 5.4E-17 129.0 31.4 285 138-451 92-430 (432)
300 PRK11522 putrescine--2-oxoglut 99.6 3.2E-12 6.8E-17 133.6 32.2 289 139-451 124-453 (459)
301 KOG0256 1-aminocyclopropane-1- 99.6 9E-13 1.9E-17 129.0 25.9 293 136-449 122-461 (471)
302 COG2873 MET17 O-acetylhomoseri 99.6 7E-13 1.5E-17 128.7 23.9 276 137-448 64-424 (426)
303 PRK06541 hypothetical protein; 99.6 6.5E-12 1.4E-16 131.4 32.8 294 139-451 95-457 (460)
304 PRK12403 putative aminotransfe 99.6 7.7E-12 1.7E-16 131.0 32.9 295 138-451 97-454 (460)
305 KOG2040 Glycine dehydrogenase 99.6 5.1E-13 1.1E-17 136.6 22.9 302 135-452 578-921 (1001)
306 PRK08360 4-aminobutyrate amino 99.6 7.9E-12 1.7E-16 130.2 32.6 291 139-451 84-428 (443)
307 PRK04612 argD acetylornithine 99.6 1E-11 2.2E-16 128.2 32.9 285 139-452 82-406 (408)
308 PLN02482 glutamate-1-semialdeh 99.6 2.2E-12 4.7E-17 135.0 27.3 282 139-449 139-473 (474)
309 TIGR03372 putres_am_tran putre 99.5 1.3E-11 2.8E-16 128.2 32.5 280 139-446 117-441 (442)
310 PLN02760 4-aminobutyrate:pyruv 99.5 1E-11 2.2E-16 131.0 32.1 297 138-450 132-492 (504)
311 PRK06062 hypothetical protein; 99.5 2E-11 4.4E-16 127.5 32.4 293 139-450 95-446 (451)
312 PRK08593 4-aminobutyrate amino 99.5 1.8E-11 3.9E-16 127.7 31.9 299 139-458 85-438 (445)
313 PRK05769 4-aminobutyrate amino 99.5 3.1E-11 6.8E-16 125.8 33.4 290 139-449 97-439 (441)
314 PRK00615 glutamate-1-semialdeh 99.5 5.5E-12 1.2E-16 130.8 27.5 288 139-451 93-430 (433)
315 COG0626 MetC Cystathionine bet 99.5 6.9E-12 1.5E-16 126.5 27.1 265 143-449 67-394 (396)
316 PRK09221 beta alanine--pyruvat 99.5 3.1E-11 6.6E-16 125.9 32.7 293 139-450 92-444 (445)
317 PRK08088 4-aminobutyrate amino 99.5 1.5E-11 3.3E-16 127.8 30.5 289 140-449 85-423 (425)
318 PRK12389 glutamate-1-semialdeh 99.5 1.1E-11 2.4E-16 128.9 28.6 280 139-449 93-427 (428)
319 PRK13360 omega amino acid--pyr 99.5 5.1E-11 1.1E-15 124.2 32.3 294 139-450 89-441 (442)
320 KOG2467 Glycine/serine hydroxy 99.5 2E-11 4.3E-16 117.9 26.6 295 137-448 84-425 (477)
321 TIGR00508 bioA adenosylmethion 99.5 2.3E-11 5.1E-16 126.3 29.3 291 139-448 88-425 (427)
322 PRK06777 4-aminobutyrate amino 99.5 5.7E-11 1.2E-15 123.3 31.4 290 139-447 83-419 (421)
323 PLN00144 acetylornithine trans 99.5 6.1E-11 1.3E-15 121.5 31.1 281 139-449 57-380 (382)
324 TIGR00700 GABAtrnsam 4-aminobu 99.5 7.8E-11 1.7E-15 122.3 31.4 286 139-447 76-418 (420)
325 KOG0634 Aromatic amino acid am 99.5 6E-11 1.3E-15 117.3 28.5 300 136-451 101-468 (472)
326 PRK09264 diaminobutyrate--2-ox 99.5 8.9E-11 1.9E-15 122.0 31.5 295 139-453 82-420 (425)
327 PRK07046 aminotransferase; Val 99.5 4E-11 8.7E-16 125.2 28.8 288 138-450 114-451 (453)
328 PRK09792 4-aminobutyrate trans 99.5 1E-10 2.2E-15 121.5 31.6 287 139-448 83-420 (421)
329 PRK06058 4-aminobutyrate amino 99.5 8.9E-11 1.9E-15 122.6 31.3 289 139-449 99-442 (443)
330 COG0160 GabT 4-aminobutyrate a 99.5 1.2E-10 2.7E-15 118.9 31.1 288 139-449 99-445 (447)
331 COG1982 LdcC Arginine/lysine/o 99.5 2E-12 4.3E-17 133.7 17.8 236 140-393 71-318 (557)
332 PF05889 SLA_LP_auto_ag: Solub 99.5 1.8E-12 4E-17 128.5 16.7 292 140-448 57-389 (389)
333 PRK07986 adenosylmethionine--8 99.5 1.5E-10 3.3E-15 120.0 31.6 292 139-448 86-422 (428)
334 TIGR02407 ectoine_ectB diamino 99.5 1.5E-10 3.3E-15 119.7 31.6 290 139-448 78-411 (412)
335 PRK06173 adenosylmethionine--8 99.5 1.2E-10 2.7E-15 120.8 30.6 295 139-452 87-428 (429)
336 PRK07678 aminotransferase; Val 99.4 1.5E-10 3.2E-15 121.0 31.2 295 139-450 89-450 (451)
337 PRK06943 adenosylmethionine--8 99.4 1.4E-10 3E-15 121.2 30.9 294 139-450 97-447 (453)
338 KOG1358 Serine palmitoyltransf 99.4 2.1E-11 4.6E-16 118.8 21.8 283 141-449 141-465 (467)
339 PRK07495 4-aminobutyrate amino 99.4 3.1E-10 6.7E-15 117.8 32.1 289 139-451 83-423 (425)
340 PRK06105 aminotransferase; Pro 99.4 2.4E-10 5.2E-15 119.7 31.6 296 139-451 92-451 (460)
341 PRK06918 4-aminobutyrate amino 99.4 4.8E-10 1E-14 117.4 33.5 292 139-453 97-447 (451)
342 PRK05639 4-aminobutyrate amino 99.4 3.7E-10 8.1E-15 118.1 31.6 290 139-451 96-445 (457)
343 PRK06082 4-aminobutyrate amino 99.4 4.2E-10 9.2E-15 117.8 31.7 292 139-453 113-455 (459)
344 KOG0053 Cystathionine beta-lya 99.4 4.8E-11 1E-15 119.1 23.0 212 141-391 79-298 (409)
345 PRK05965 hypothetical protein; 99.4 7E-10 1.5E-14 116.2 32.9 299 139-453 90-451 (459)
346 PRK06209 glutamate-1-semialdeh 99.4 2.4E-10 5.3E-15 118.9 29.2 286 139-451 88-407 (431)
347 COG0403 GcvP Glycine cleavage 99.4 5.5E-10 1.2E-14 110.7 29.7 341 79-446 57-447 (450)
348 PRK04013 argD acetylornithine/ 99.4 3.1E-10 6.6E-15 115.2 29.0 269 139-450 66-361 (364)
349 PRK07482 hypothetical protein; 99.4 6.6E-10 1.4E-14 116.5 32.0 298 139-451 94-456 (461)
350 PRK06917 hypothetical protein; 99.4 6.4E-10 1.4E-14 116.1 31.3 296 139-452 74-440 (447)
351 PRK07481 hypothetical protein; 99.4 7.9E-10 1.7E-14 115.6 32.0 299 139-450 86-446 (449)
352 PRK07480 putative aminotransfe 99.4 7.9E-10 1.7E-14 115.7 31.8 296 139-454 94-453 (456)
353 PRK07030 adenosylmethionine--8 99.4 1.1E-09 2.4E-14 114.8 32.7 294 139-451 90-448 (466)
354 TIGR00709 dat 2,4-diaminobutyr 99.4 8.3E-10 1.8E-14 115.3 31.7 294 139-451 82-437 (442)
355 PRK06916 adenosylmethionine--8 99.4 1.1E-09 2.3E-14 114.9 31.8 295 139-451 99-457 (460)
356 PRK07036 hypothetical protein; 99.4 1.8E-09 4E-14 113.2 33.4 294 139-450 95-453 (466)
357 PRK08742 adenosylmethionine--8 99.4 1.2E-09 2.6E-14 114.5 31.9 294 139-450 107-468 (472)
358 PRK06149 hypothetical protein; 99.4 8.1E-10 1.8E-14 125.6 31.4 291 139-449 624-970 (972)
359 TIGR02617 tnaA_trp_ase tryptop 99.3 4.8E-10 1E-14 113.6 24.3 292 136-449 75-441 (467)
360 PRK07483 hypothetical protein; 99.3 5.2E-09 1.1E-13 109.2 31.8 296 139-451 73-439 (443)
361 PRK12566 glycine dehydrogenase 99.3 2.1E-09 4.6E-14 118.1 29.4 332 78-444 60-439 (954)
362 PRK06148 hypothetical protein; 99.3 2.3E-09 5E-14 122.1 31.0 293 139-451 663-1012(1013)
363 PRK05630 adenosylmethionine--8 99.3 4.5E-09 9.7E-14 109.0 30.1 289 139-449 83-420 (422)
364 COG3977 Alanine-alpha-ketoisov 99.3 2.5E-09 5.5E-14 101.1 24.8 343 81-453 16-415 (417)
365 PRK06931 diaminobutyrate--2-ox 99.2 1E-08 2.3E-13 107.4 30.2 291 139-452 101-457 (459)
366 PRK06938 diaminobutyrate--2-ox 99.2 1.7E-08 3.6E-13 105.9 31.6 292 139-450 106-461 (464)
367 TIGR00699 GABAtrns_euk 4-amino 99.2 8.7E-09 1.9E-13 107.5 29.2 283 140-446 106-463 (464)
368 TIGR03251 LAT_fam L-lysine 6-t 99.2 7E-09 1.5E-13 108.0 27.7 284 143-445 89-430 (431)
369 PRK08297 L-lysine aminotransfe 99.2 1.3E-08 2.9E-13 106.1 29.1 290 139-450 92-442 (443)
370 COG0161 BioA Adenosylmethionin 99.2 8.5E-09 1.8E-13 105.0 26.0 298 142-453 90-447 (449)
371 KOG0258 Alanine aminotransfera 99.2 3.8E-08 8.3E-13 96.3 27.4 257 134-403 112-398 (475)
372 KOG1402 Ornithine aminotransfe 99.1 4E-08 8.7E-13 94.3 22.6 278 140-447 102-425 (427)
373 KOG1401 Acetylornithine aminot 99.1 1.2E-07 2.6E-12 93.7 26.1 281 159-451 117-432 (433)
374 PF00202 Aminotran_3: Aminotra 99.0 2.1E-08 4.6E-13 101.1 20.0 225 139-386 59-315 (339)
375 KOG1404 Alanine-glyoxylate ami 99.0 4.8E-08 1E-12 95.9 20.7 264 160-443 111-432 (442)
376 COG1921 SelA Selenocysteine sy 99.0 1.4E-08 3.1E-13 101.1 17.3 180 160-363 85-271 (395)
377 KOG0630 Predicted pyridoxal-de 99.0 7E-09 1.5E-13 103.7 14.6 190 185-391 232-437 (838)
378 KOG0633 Histidinol phosphate a 99.0 1E-08 2.2E-13 95.3 14.0 257 161-445 89-373 (375)
379 COG1448 TyrB Aspartate/tyrosin 99.0 7.3E-08 1.6E-12 94.8 19.4 268 160-446 96-395 (396)
380 COG1932 SerC Phosphoserine ami 98.9 4.6E-07 1E-11 88.8 22.8 315 110-449 18-363 (365)
381 PLN02974 adenosylmethionine-8- 98.9 1.7E-06 3.7E-11 95.8 30.1 211 222-447 567-816 (817)
382 PF06838 Met_gamma_lyase: Meth 98.9 4.9E-07 1.1E-11 88.7 21.2 238 141-407 56-320 (403)
383 PF03841 SelA: L-seryl-tRNA se 98.8 1.1E-08 2.3E-13 101.3 6.0 169 143-330 51-235 (367)
384 COG3033 TnaA Tryptophanase [Am 98.7 2.5E-06 5.5E-11 83.0 21.4 288 145-449 85-444 (471)
385 KOG3846 L-kynurenine hydrolase 98.7 3.4E-06 7.3E-11 80.5 20.6 294 141-450 113-462 (465)
386 PF12897 Aminotran_MocR: Alani 98.6 5.9E-05 1.3E-09 74.8 27.0 287 143-448 73-414 (425)
387 KOG3843 Predicted serine hydro 98.5 3.8E-07 8.3E-12 85.1 8.8 228 142-386 60-295 (432)
388 KOG2790 Phosphoserine aminotra 98.3 0.00013 2.8E-09 69.2 19.3 315 110-448 20-367 (370)
389 KOG1403 Predicted alanine-glyo 98.1 0.00011 2.4E-09 70.1 15.8 287 139-448 87-436 (452)
390 COG4100 Cystathionine beta-lya 98.1 4.7E-05 1E-09 72.7 13.1 168 146-328 72-256 (416)
391 KOG2040 Glycine dehydrogenase 97.5 0.026 5.6E-07 59.6 22.5 338 76-445 97-479 (1001)
392 KOG1405 4-aminobutyrate aminot 97.4 0.0043 9.3E-08 60.9 14.1 207 220-449 254-483 (484)
393 KOG1412 Aspartate aminotransfe 97.1 0.051 1.1E-06 52.7 17.7 272 159-450 100-406 (410)
394 PF04864 Alliinase_C: Allinase 96.8 0.045 9.7E-07 54.1 15.2 277 137-446 45-362 (363)
395 PLN02994 1-aminocyclopropane-1 96.6 0.0058 1.3E-07 54.2 6.4 58 136-195 93-152 (153)
396 KOG1411 Aspartate aminotransfe 94.7 0.28 6E-06 48.5 10.2 268 162-447 124-423 (427)
397 COG2515 Acd 1-aminocyclopropan 85.7 12 0.00026 36.8 11.4 134 136-281 48-192 (323)
398 COG1504 Uncharacterized conser 65.3 18 0.00039 29.8 5.3 44 217-265 47-90 (121)
399 PF05368 NmrA: NmrA-like famil 64.6 65 0.0014 30.0 10.2 71 186-265 25-95 (233)
400 PF08734 GYD: GYD domain; Int 59.6 61 0.0013 25.8 7.6 75 364-440 10-90 (91)
401 COG0300 DltE Short-chain dehyd 58.7 1.2E+02 0.0026 29.4 10.8 98 162-261 9-113 (265)
402 COG1184 GCD2 Translation initi 55.2 2.2E+02 0.0048 28.1 12.2 96 159-265 120-222 (301)
403 PF06506 PrpR_N: Propionate ca 54.6 57 0.0012 29.3 7.5 99 146-265 46-144 (176)
404 COG2102 Predicted ATPases of P 53.9 1.1E+02 0.0024 28.7 9.2 96 161-265 4-113 (223)
405 KOG0622 Ornithine decarboxylas 53.1 2.4E+02 0.0052 29.1 12.0 86 183-275 123-217 (448)
406 TIGR03573 WbuX N-acetyl sugar 53.1 2.5E+02 0.0054 28.2 12.6 100 161-280 63-171 (343)
407 COG3453 Uncharacterized protei 49.4 79 0.0017 26.7 6.7 81 183-265 37-127 (130)
408 cd05126 Mth938 Mth938 domain. 49.0 59 0.0013 27.3 6.1 43 218-265 45-87 (117)
409 COG0616 SppA Periplasmic serin 48.6 1.7E+02 0.0036 29.2 10.4 90 218-324 79-173 (317)
410 cd01455 vWA_F11C1-5a_type Von 45.8 55 0.0012 30.1 5.9 37 236-277 114-150 (191)
411 PRK02289 4-oxalocrotonate taut 44.6 55 0.0012 23.6 4.7 48 422-469 3-50 (60)
412 COG0296 GlgB 1,4-alpha-glucan 43.4 22 0.00048 38.7 3.4 77 240-324 203-280 (628)
413 COG1954 GlpP Glycerol-3-phosph 38.1 67 0.0015 28.9 4.9 50 220-280 12-61 (181)
414 cd01018 ZntC Metal binding pro 37.5 2.1E+02 0.0046 27.4 9.1 70 183-265 169-241 (266)
415 TIGR01244 conserved hypothetic 37.4 1.7E+02 0.0038 24.9 7.5 67 196-265 48-126 (135)
416 cd00248 Mth938-like Mth938-lik 36.6 1.4E+02 0.0031 24.5 6.5 44 217-265 37-80 (109)
417 TIGR03679 arCOG00187 arCOG0018 34.2 3.5E+02 0.0075 25.2 9.6 97 162-265 2-113 (218)
418 PLN02672 methionine S-methyltr 33.7 8.5E+02 0.018 28.9 14.2 131 133-277 424-565 (1082)
419 TIGR00511 ribulose_e2b2 ribose 32.2 5E+02 0.011 25.6 13.2 95 160-265 117-218 (301)
420 cd00886 MogA_MoaB MogA_MoaB fa 32.2 1.3E+02 0.0029 26.2 6.1 60 195-258 23-84 (152)
421 TIGR00177 molyb_syn molybdenum 32.0 1.8E+02 0.004 25.0 6.9 62 193-258 28-89 (144)
422 cd01020 TroA_b Metal binding p 31.9 2.1E+02 0.0046 27.4 8.0 74 183-265 152-233 (264)
423 TIGR02717 AcCoA-syn-alpha acet 31.4 1.3E+02 0.0028 31.6 6.7 52 220-278 77-130 (447)
424 cd01017 AdcA Metal binding pro 30.8 2.9E+02 0.0064 26.7 8.9 71 183-265 170-244 (282)
425 PF01008 IF-2B: Initiation fac 30.8 2.9E+02 0.0063 26.7 8.9 101 160-275 109-216 (282)
426 PF02310 B12-binding: B12 bind 30.5 2.9E+02 0.0064 22.4 8.0 72 197-279 20-91 (121)
427 cd05560 Xcc1710_like Xcc1710_l 30.2 1.9E+02 0.0042 23.8 6.3 42 218-265 39-80 (109)
428 PLN03244 alpha-amylase; Provis 30.1 1.1E+02 0.0023 34.5 5.9 35 242-281 432-466 (872)
429 TIGR01536 asn_synth_AEB aspara 29.2 5.2E+02 0.011 27.1 11.0 120 139-277 237-364 (467)
430 PF01297 TroA: Periplasmic sol 29.1 1.5E+02 0.0032 28.2 6.4 71 183-265 149-223 (256)
431 PRK08535 translation initiatio 29.0 5.8E+02 0.013 25.3 12.9 94 161-265 123-223 (310)
432 COG1748 LYS9 Saccharopine dehy 28.9 6.6E+02 0.014 25.9 11.1 66 161-231 4-69 (389)
433 COG0367 AsnB Asparagine syntha 28.8 4.8E+02 0.01 28.2 10.7 117 139-275 214-338 (542)
434 PRK10494 hypothetical protein; 28.7 2E+02 0.0043 27.8 7.0 70 141-214 138-210 (259)
435 cd00758 MoCF_BD MoCF_BD: molyb 28.4 1.8E+02 0.0039 24.6 6.1 62 193-258 20-81 (133)
436 COG2870 RfaE ADP-heptose synth 28.3 1.1E+02 0.0023 31.6 5.1 50 219-275 128-177 (467)
437 TIGR00290 MJ0570_dom MJ0570-re 27.7 5.2E+02 0.011 24.3 10.8 94 161-265 4-112 (223)
438 TIGR00289 conserved hypothetic 27.7 5.2E+02 0.011 24.3 10.6 95 161-265 4-112 (222)
439 smart00852 MoCF_biosynth Proba 27.2 2E+02 0.0044 24.3 6.3 61 193-257 19-79 (135)
440 cd01019 ZnuA Zinc binding prot 27.1 3.8E+02 0.0082 26.1 8.9 71 184-265 179-252 (286)
441 PF02110 HK: Hydroxyethylthiaz 26.9 2.7E+02 0.0059 26.7 7.5 65 197-277 23-87 (246)
442 PF13460 NAD_binding_10: NADH( 26.9 4.3E+02 0.0093 23.0 9.9 42 219-265 49-90 (183)
443 PF01136 Peptidase_U32: Peptid 26.7 5E+02 0.011 24.1 9.4 77 143-231 3-82 (233)
444 TIGR01275 ACC_deam_rel pyridox 26.6 2.9E+02 0.0063 27.1 8.1 53 161-213 58-113 (311)
445 TIGR01019 sucCoAalpha succinyl 26.3 1.4E+02 0.0031 29.3 5.6 66 190-265 48-115 (286)
446 PRK08329 threonine synthase; V 25.9 5.9E+02 0.013 25.6 10.3 52 161-213 107-158 (347)
447 PRK05678 succinyl-CoA syntheta 25.9 1.5E+02 0.0031 29.3 5.6 65 191-265 51-117 (291)
448 PRK09355 hydroxyethylthiazole 25.9 2.8E+02 0.006 26.7 7.6 63 199-277 30-92 (263)
449 cd03325 D-galactonate_dehydrat 25.7 6.5E+02 0.014 25.3 10.6 90 172-265 163-279 (352)
450 COG2185 Sbm Methylmalonyl-CoA 25.5 3.4E+02 0.0073 23.7 7.1 60 197-265 32-92 (143)
451 PF04748 Polysacc_deac_2: Dive 25.4 2.3E+02 0.0049 26.5 6.6 54 218-277 70-126 (213)
452 PRK15452 putative protease; Pr 25.3 8.1E+02 0.018 25.7 14.0 133 86-231 14-156 (443)
453 PRK13802 bifunctional indole-3 25.1 1E+03 0.022 26.7 12.8 72 137-213 361-437 (695)
454 PRK11633 cell division protein 24.8 3.2E+02 0.007 25.8 7.5 54 374-446 160-213 (226)
455 cd04736 MDH_FMN Mandelate dehy 24.7 1.8E+02 0.0039 29.6 6.1 54 217-277 243-297 (361)
456 cd01991 Asn_Synthase_B_C The C 24.7 5.3E+02 0.011 24.3 9.4 100 160-279 18-126 (269)
457 TIGR01138 cysM cysteine syntha 24.5 3.6E+02 0.0079 26.3 8.2 53 161-214 62-114 (290)
458 PF07476 MAAL_C: Methylasparta 24.4 4.7E+02 0.01 24.8 8.2 146 73-265 41-190 (248)
459 smart00642 Aamy Alpha-amylase 24.1 66 0.0014 28.7 2.7 30 245-279 64-93 (166)
460 KOG2741 Dimeric dihydrodiol de 23.9 4.1E+02 0.009 26.8 8.3 110 146-280 20-133 (351)
461 PF03435 Saccharop_dh: Sacchar 23.9 7.5E+02 0.016 25.0 10.8 92 166-278 6-99 (386)
462 cd00491 4Oxalocrotonate_Tautom 23.8 2.1E+02 0.0046 19.8 4.9 30 422-451 2-31 (58)
463 PLN00125 Succinyl-CoA ligase [ 23.7 1.4E+02 0.0031 29.5 5.1 67 190-265 54-122 (300)
464 cd06449 ACCD Aminocyclopropane 23.6 4.6E+02 0.01 25.7 8.9 54 161-214 54-117 (307)
465 PLN03013 cysteine synthase 23.5 4.8E+02 0.011 27.2 9.2 53 161-214 178-230 (429)
466 PRK11761 cysM cysteine synthas 23.4 3E+02 0.0065 27.0 7.5 52 161-213 66-117 (296)
467 PRK09545 znuA high-affinity zi 23.0 4.6E+02 0.01 25.9 8.7 72 184-265 203-276 (311)
468 cd07018 S49_SppA_67K_type Sign 22.9 4.6E+02 0.0099 24.4 8.3 90 218-321 28-119 (222)
469 PF07131 DUF1382: Protein of u 22.9 1.7E+02 0.0036 21.3 3.8 30 421-450 22-51 (61)
470 cd01561 CBS_like CBS_like: Thi 22.6 6.8E+02 0.015 24.2 9.8 53 161-214 56-108 (291)
471 TIGR00381 cdhD CO dehydrogenas 22.5 3.9E+02 0.0084 27.4 7.9 61 202-276 185-247 (389)
472 cd02007 TPP_DXS Thiamine pyrop 22.3 5.7E+02 0.012 23.3 8.6 67 171-241 114-188 (195)
473 cd03315 MLE_like Muconate lact 22.3 6.5E+02 0.014 23.9 9.5 43 219-265 190-232 (265)
474 PF10087 DUF2325: Uncharacteri 22.0 4E+02 0.0087 21.0 7.7 63 194-265 12-76 (97)
475 PRK12481 2-deoxy-D-gluconate 3 22.0 4.9E+02 0.011 24.3 8.5 82 161-246 10-95 (251)
476 PF04273 DUF442: Putative phos 21.6 1.5E+02 0.0033 24.5 4.2 46 196-243 48-96 (110)
477 PF03162 Y_phosphatase2: Tyros 21.5 1.3E+02 0.0027 26.9 3.9 56 195-250 46-108 (164)
478 COG1606 ATP-utilizing enzymes 21.5 5.1E+02 0.011 25.0 8.0 96 161-279 21-123 (269)
479 TIGR00649 MG423 conserved hypo 21.4 6E+02 0.013 26.2 9.6 62 204-273 348-409 (422)
480 PF02603 Hpr_kinase_N: HPr Ser 21.4 94 0.002 26.3 3.0 42 218-265 64-106 (127)
481 cd03318 MLE Muconate Lactonizi 21.3 7.1E+02 0.015 25.0 9.9 23 243-265 269-291 (365)
482 TIGR01274 ACC_deam 1-aminocycl 21.3 5.3E+02 0.012 25.7 8.9 54 161-214 68-131 (337)
483 PLN02556 cysteine synthase/L-3 21.2 4.9E+02 0.011 26.5 8.6 52 161-213 114-165 (368)
484 COG2240 PdxK Pyridoxal/pyridox 21.0 3.1E+02 0.0066 26.9 6.6 79 200-278 23-113 (281)
485 PRK03910 D-cysteine desulfhydr 20.6 4E+02 0.0087 26.5 7.8 54 161-214 66-129 (331)
486 cd01562 Thr-dehyd Threonine de 20.5 4E+02 0.0087 25.9 7.7 53 161-214 68-120 (304)
487 PRK08057 cobalt-precorrin-6x r 20.3 2.3E+02 0.005 27.2 5.7 27 247-278 48-74 (248)
488 PF01902 ATP_bind_4: ATP-bindi 20.3 4.7E+02 0.01 24.5 7.7 95 161-265 4-112 (218)
489 cd00640 Trp-synth-beta_II Tryp 20.3 7.1E+02 0.015 23.2 9.3 53 161-214 52-105 (244)
490 PF00128 Alpha-amylase: Alpha 20.1 78 0.0017 30.5 2.6 35 240-279 41-75 (316)
No 1
>PLN02263 serine decarboxylase
Probab=100.00 E-value=4.4e-79 Score=622.74 Aligned_cols=433 Identities=90% Similarity=1.473 Sum_probs=410.4
Q ss_pred CCccceeeeccCCcccccccccCCCccccccCCCCCcHHHHHHHHHHHHhcccccccCCCCcCCcchHHHHHHHHHhhCC
Q 011842 44 HKTAEKEIVLGKNVHASCFSVTEPEADDEFTGDKEAYMAGVLARYRKTLMERTKHHLGYPYNLDFDYGALAQLQHFSINN 123 (476)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~g~p~~~~~~~~~l~~~l~~~~n~ 123 (476)
.....|+++++++.+..+|+..+|+..++...+....++.+++++.+.+.++..+++|||.+..++++.+++++.+.+||
T Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gYp~n~~~d~s~l~~~l~~~~nN 117 (470)
T PLN02263 38 DLGGEREIVLGRNVHTTCLAVTEPEADDEFTGDKEAYMASVLARYRKTLVERTKHHLGYPYNLDFDYGALGQLQHFSINN 117 (470)
T ss_pred cccccceeeeecccccccccccCCCCchhhhhcchhhHHHHHHHHHHHHHhcccceeCCCCcccCChhhHHHHHHhhccC
Confidence 44558899999999999999999999887777776678999999999999999999999999999889999999999999
Q ss_pred CCCCcccCccchhhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHH
Q 011842 124 LGDPFIESNYGVHSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARM 203 (476)
Q Consensus 124 ~g~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~ 203 (476)
.|++|..++++.+++++|+++.+|+++++|++++.++|++|+|||+||++|++++|+..++.++|+|+.+|+|+.|++++
T Consensus 118 ~Gdp~~~s~~~~~s~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~Sv~KAa~l 197 (470)
T PLN02263 118 LGDPFIESNYGVHSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARM 197 (470)
T ss_pred CCCccccCCcchhHHHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHHHHHHHHh
Confidence 99999999999899999999999999999998766789999999999999999999988888999999999999999999
Q ss_pred cCCeEEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccc
Q 011842 204 YRMECVKVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMM 283 (476)
Q Consensus 204 ~G~~v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~ 283 (476)
+|++++.||++++|+||+++|+++|.+++.+|++|++|.|||++|++|||++|+++|++||+++.++|+||||||||+++
T Consensus 198 lgi~~~~Vp~d~~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~l 277 (470)
T PLN02263 198 YRMECVKVDTLVSGEIDCADFKAKLLANKDKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGALFGLMM 277 (470)
T ss_pred cCCcceEeccCCCCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccchhhHh
Confidence 99999999999999999999999999888889999999999999999999999999999998777889999999999999
Q ss_pred cccccCCCCCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhCh
Q 011842 284 PFVKKAPKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGY 363 (476)
Q Consensus 284 ~~~~~~~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~ 363 (476)
|+.++.+.+++.+.+|||++|+|||+++|++||++++|+++++.+...++|+...+.++.+||++..++++|++|+.+|.
T Consensus 278 Pf~~~~~~~df~~~vDSIsvD~HK~l~~P~~cgvll~R~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~al~lW~~L~~~G~ 357 (470)
T PLN02263 278 PFVKRAPKVTFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGY 357 (470)
T ss_pred hhcccccccCCCcCccEEEECCccccCCCcCEEEEEEehhhHhhhccChHhhCCCCCCcCCCCCcHHHHHHHHHHHHhCH
Confidence 98888777888878999999999999999999999999888888888899999999999999999889999999999999
Q ss_pred hcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecCCcHHHhhceeecccCCEEEEEEcCCCCHHHHHHHHHHH
Q 011842 364 KGFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERPQDEEFVRRWQLACQGNIAHVVVMPNVTIDKLDDFLNEL 443 (476)
Q Consensus 364 ~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~~~~~~~~~~l~~~~~~lRv~~~~~~T~edid~~~~~l 443 (476)
+|++++++++.+++++|.++|++.|+..+.+|.+++|+|+.|.++...++|++++.++.+|++++|++|.+.||.|+++|
T Consensus 358 ~G~~~~i~~~~~~A~~l~~~l~~~g~~~~~~p~s~~V~f~~p~~~~~~~gW~L~~~~~~~Hivvmphv~~~~id~fi~DL 437 (470)
T PLN02263 358 RGFQKEVQKCLRNAHYLKDRLREAGISAMLNELSSTVVFERPKDEEFVRRWQLACQGNIAHVVVMPSVTIEKLDYFLKEL 437 (470)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCeEEeCCCceEEEEecCchHHhhcceEEccCCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999888899999999998876667899999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCCccccccCCcccccccCC
Q 011842 444 IENRSTWYEDGKRQPPCIAADIGSENCVCAAHK 476 (476)
Q Consensus 444 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (476)
++..+.++.|++..+||+|+|+|++||+|++|+
T Consensus 438 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (470)
T PLN02263 438 VEKRSTWYPDGKVQPPCVAKDVGEENCLCSLHK 470 (470)
T ss_pred HHHHhhhhhccccCCceeecccccccchhhccC
Confidence 999999999999999999999999999999996
No 2
>PLN03032 serine decarboxylase; Provisional
Probab=100.00 E-value=2.4e-61 Score=486.28 Aligned_cols=372 Identities=76% Similarity=1.327 Sum_probs=344.6
Q ss_pred CCCCCcHHHHHHHHHHHHhcccccccCCCCcCCcchHHHHHHHHHhhCCCCCCcccCccchhhHHHHHHHHHHHHHHcCC
Q 011842 75 GDKEAYMAGVLARYRKTLMERTKHHLGYPYNLDFDYGALAQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWEL 154 (476)
Q Consensus 75 ~~~~~~~~~il~~~~~~~~~~~~~~~g~p~~~~~~~~~l~~~l~~~~n~~g~~~~~~~~~~~~~~le~~~~~~la~l~g~ 154 (476)
+|......++++.+.+.+......++|||.+..++++.+..++.+..++.|+++..++++..+.++|+++++|+++++|+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~gnP~s~~~~g~~a~~~e~~v~~~ia~llg~ 81 (374)
T PLN03032 2 GERDAYMADILASYDKLLAEKSSVHFGYPYNLDFDYGELSQLMKYSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWEL 81 (374)
T ss_pred ccHHHHHHHHHHHHHHHHHHhhhhccCCCchhccChHHHHHHHHhcccCCCCCcccCCCCccHHHHHHHHHHHHHHHhCC
Confidence 45556678999999999999888899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccCHHHHHHHHHcCCCC
Q 011842 155 ENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCADFKAKLLQNKDK 234 (476)
Q Consensus 155 ~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~~~Le~~l~~~~~~ 234 (476)
++++.+|+||+|||+||++|++++|+..++.+||++..+|+|+.++++++|++++.||++++|.||+++|+++|++++.+
T Consensus 82 ~~~~~~G~fTsGGTEaNl~al~~ar~~~~~~~vi~s~~~H~Sv~kaa~~lg~~~~~V~~d~~g~id~~~L~~~i~~~~~~ 161 (374)
T PLN03032 82 EKDEYWGYITTCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMEAVKVPTLPSGEIDYDDLERALAKNRDK 161 (374)
T ss_pred CCccCCEEEeCchHHHHHHHHHHHHHhCCCcEEEeCCCceeHHHHHHHHcCCCCeEeeeCCCCcCcHHHHHHHHHHcCCC
Confidence 87667899999999999999999998777789999999999999999999999999999999999999999999987777
Q ss_pred cEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCcccccEEEEcCCCCCCCCCC
Q 011842 235 PAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKPIGSVSVSGHKFVGCPMP 314 (476)
Q Consensus 235 p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~~Dsi~~s~hK~l~~p~~ 314 (476)
|++|+++.++|++|++||+++|+++|++||+.+.++|+|||+||+++.+|+....+.+++...+||+++|+|||+++|++
T Consensus 162 ~~lvv~tagtt~tG~idpi~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~~~~~vDSis~s~HK~~g~P~g 241 (374)
T PLN03032 162 PAILNVNIGTTVKGAVDDLDRILRILKELGYTEDRFYIHCDGALFGLMMPFVSRAPEVTFRKPIGSVSVSGHKFLGCPMP 241 (374)
T ss_pred CEEEEEEecCcCCccCCCHHHHHHHHHHhCCCCCCeeEEEEccchhhhhhccCCCcccCCCcCCcEEEECcccccCCCcC
Confidence 89999999999999999999999999999864456699999999999888766666677776799999999999999999
Q ss_pred ceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeec
Q 011842 315 CGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLN 394 (476)
Q Consensus 315 ~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~ 394 (476)
||++++|+++++.+....+|+...+.++.|||++..++++|++|+.+|.+|++++++++.+++++|.++|++.++..+.+
T Consensus 242 ~G~ll~r~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~~l~~w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~ 321 (374)
T PLN03032 242 CGVALTRKKHVKALSQNVEYLNSRDATIMGSRNGHAPLYLWYTLRRKGYRGIKRDVQHCMRNAHYLKDRLTEAGLTCRLN 321 (374)
T ss_pred eEEEEEEchhhHhhccCCcccCCCCCcccCCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEC
Confidence 99999999888888888999999999999999999999999999999999999999999999999999999999988889
Q ss_pred CCeeEEEEecCCcHHHhhceeecccCCEEEEEEcCCCCHHHHHHHHHHHHHH
Q 011842 395 ELSSTVVFERPQDEEFVRRWQLACQGNIAHVVVMPNVTIDKLDDFLNELIEN 446 (476)
Q Consensus 395 ~~~~iv~f~~~~~~~~~~~~~l~~~~~~lRv~~~~~~T~edid~~~~~l~~~ 446 (476)
|.+++|+|+.|.++.+.++|++++.+..+|++++|++|++.||+|+++|++.
T Consensus 322 p~~~~V~f~~~~~~~~~~~w~l~~~~~~~hi~vm~~~~~~~id~fi~dl~~~ 373 (374)
T PLN03032 322 ELSSTVVFERPMDEAFIKKWQLACEGDIAHVVVMPNVTVEKLDEFVEELVEV 373 (374)
T ss_pred CCceEEEEcCCCcHhHhheeeecccCCEEEEEECCCCCHHHHHHHHHHHhcc
Confidence 9999999999876667799999998899999999999999999999999764
No 3
>PRK02769 histidine decarboxylase; Provisional
Probab=100.00 E-value=4.5e-57 Score=458.43 Aligned_cols=364 Identities=44% Similarity=0.801 Sum_probs=335.6
Q ss_pred HHHHHHHHHHHhcccccccCCCCcCCcchHHHHHHHHHhhCCCCCCcccCccchhhHHHHHHHHHHHHHHcCCCCCcccE
Q 011842 82 AGVLARYRKTLMERTKHHLGYPYNLDFDYGALAQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELENNEYWG 161 (476)
Q Consensus 82 ~~il~~~~~~~~~~~~~~~g~p~~~~~~~~~l~~~l~~~~n~~g~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~g 161 (476)
.+.++.+...+......++|||.+..++++.+.+++.+..|+.|+++..+.++..+.++|+++++|+++++|+++++.+|
T Consensus 8 ~~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~n~gnp~~~~~~g~~~~~~e~~~~~~~a~l~g~~~~~~~G 87 (380)
T PRK02769 8 QKEIEDFWLYLRHNQYFNVGYPEAADFDYSALKRFFSFSINNCGDPYSKSNYPLNSFDFERDVMNFFAELFKIPFNESWG 87 (380)
T ss_pred HHHHHHHHHHHHHhhhcccCCCchhhcCHHHHHHHHHhhhccCCCccccCCCCCChHHHHHHHHHHHHHHhCCCCCCCCE
Confidence 57888899888888888999999999988999999999999999998888888889999999999999999998666689
Q ss_pred EEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEe
Q 011842 162 YITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCADFKAKLLQNKDKPAIINVN 241 (476)
Q Consensus 162 ~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t 241 (476)
+||+|||+||+.|++++|++.++++||+++.+|+|+.++++.+|++.+.|+++++|+||+++|+++|++++++|.+|+++
T Consensus 88 ~~TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~Sv~ka~~~lg~~~~~V~~~~~g~id~~~L~~~i~~~~~~t~lvv~t 167 (380)
T PRK02769 88 YITNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSVSKIARLLRIKSRVITSLPNGEIDYDDLISKIKENKNQPPIIFAN 167 (380)
T ss_pred EEecChHHHHHHHHHHHHHhCCCcEEEeCCCceehHHHHHHHcCCCCceeccCCCCcCcHHHHHHHHHhCCCCcEEEEEE
Confidence 99999999999999999988889999999999999999999999999999999899999999999999887778899999
Q ss_pred eCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCcccccEEEEcCCCCCCCCCCceeEEee
Q 011842 242 IGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKPIGSVSVSGHKFVGCPMPCGVQITR 321 (476)
Q Consensus 242 ~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~ 321 (476)
+++|++|.+||+++|+++|++||+ .++|+|||+||+++.+|+.++.+.+++.+.+||+++|+|||+++|++||++++|
T Consensus 168 ~gtt~tG~idpi~~I~~i~~~~g~--~~~~lHVDaA~gg~~~p~~~~~~~~d~~~~vDsis~s~HK~~~~P~g~G~l~~r 245 (380)
T PRK02769 168 IGTTMTGAIDNIKEIQEILKKIGI--DDYYIHADAALSGMILPFVNNPPPFSFADGIDSIAISGHKFIGSPMPCGIVLAK 245 (380)
T ss_pred eCCCCCcccCCHHHHHHHHHHhCC--CceEEEEEecccceeecccCccccCCccCCCCEEEECCcccCCCCCCcEEEEEe
Confidence 999999999999999999999981 112999999999999998877667888778999999999999999999999999
Q ss_pred hhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEE
Q 011842 322 MEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVV 401 (476)
Q Consensus 322 ~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~ 401 (476)
++..+.+....+|+...+.++.|||++..++++|++++.+|.+|++++++++.++++||.++|++.|+..+.+|.+++|+
T Consensus 246 ~~~~~~~~~~~~yl~~~d~t~~GSR~g~~~l~lw~aL~~lg~~G~~~~~~~~~~la~~l~~~L~~~g~~~~~~p~~~~v~ 325 (380)
T PRK02769 246 KKYVERISVDVDYIGSRDQTISGSRNGHTALLLWAAIRSLGSKGLRQRVQHCLDMAQYAVDRLQANGIPAWRNPNSITVV 325 (380)
T ss_pred hhhhhhcccCccccCCCCCCccCCCCcHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEcCCCceEEE
Confidence 98877776778999888889999999999999999999999999999999999999999999999999888899999999
Q ss_pred EecCCcHHHhhceeecccCCEEEEEEcCCCCHHHHHHHHHHHHHHHH
Q 011842 402 FERPQDEEFVRRWQLACQGNIAHVVVMPNVTIDKLDDFLNELIENRS 448 (476)
Q Consensus 402 f~~~~~~~~~~~~~l~~~~~~lRv~~~~~~T~edid~~~~~l~~~~~ 448 (476)
|+.|.+ ++.++|++++.+..+|++++|++|++.||+|+++|.+...
T Consensus 326 f~~~~~-~~~~~w~l~~~~~~~hi~~~~~~~~~~~~~f~~dl~~~~~ 371 (380)
T PRK02769 326 FPCPSE-RIWKKWHLATSGNQAHIITMPHHNKQQIDSLIDELIFDLK 371 (380)
T ss_pred EcCCCH-HHHhCeeEcccCCEEEEEECCCCCHHHHHHHHHHHHHHHh
Confidence 998865 4579999999889999999999999999999999988765
No 4
>PLN02590 probable tyrosine decarboxylase
Probab=100.00 E-value=3.9e-56 Score=465.34 Aligned_cols=386 Identities=19% Similarity=0.249 Sum_probs=327.2
Q ss_pred cccccccCCCcccc----ccCCCCCcHHHHHHHHHHHHhcccccccCCCCcCCcc------hHHHHHHHHHhhCCCCCCc
Q 011842 59 ASCFSVTEPEADDE----FTGDKEAYMAGVLARYRKTLMERTKHHLGYPYNLDFD------YGALAQLQHFSINNLGDPF 128 (476)
Q Consensus 59 ~~~~~~~~p~~~~~----~~~~~~~~~~~il~~~~~~~~~~~~~~~g~p~~~~~~------~~~l~~~l~~~~n~~g~~~ 128 (476)
.+++...+|+++.. .+|++|++++++++++.+.+.++.+ +|+||+++++. ++.+++++...+|+.+..|
T Consensus 84 ~pv~~~~~p~~l~~~l~~~~P~~g~~~~~il~~~~~~i~p~~~-~~~hP~f~a~~~~~~~~~~~lgd~l~sa~n~~~~~~ 162 (539)
T PLN02590 84 FPVLSQVQPGYLRDMLPDSAPERPESLKELLDDVSKKIMPGIT-HWQSPSYFAYYASSTSVAGFLGEMLNAGLSVVGFTW 162 (539)
T ss_pred CCCCCCCChHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhccCC-cCCCCCeeEeccCCCcHHHHHHHHHHHhcccccCCc
Confidence 35667777776664 7899999999999999999999886 68999999874 6889999999999999999
Q ss_pred ccCccchhhHHHHHHHHHHHHHHcCCCCC-----cccEEEcCCchhHHHHHHHHHHhh---------CCCcEEEecCCCc
Q 011842 129 IESNYGVHSRQFEVGVLDWFARLWELENN-----EYWGYITNCGTEGNLHGILVGREV---------FPDGILYASRESH 194 (476)
Q Consensus 129 ~~~~~~~~~~~le~~~~~~la~l~g~~~~-----~~~g~~t~ggt~An~~al~aa~~~---------~p~~~Vl~s~~~H 194 (476)
..+| ..+++|+++.+|+++++|++.. ..+|+||+|||+||++|+.+||++ .|+.+||+|+.+|
T Consensus 163 ~~sP---a~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH 239 (539)
T PLN02590 163 LTSP---AATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTH 239 (539)
T ss_pred ccCc---hhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCch
Confidence 9888 6789999999999999999853 256999999999999999999984 2566899999999
Q ss_pred hHHHHHHHHcCC---eEEEEeCCC--CCccCHHHHHHHHHcC---CCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCC
Q 011842 195 YSVFKAARMYRM---ECVKVDCLI--SGEIDCADFKAKLLQN---KDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFT 266 (476)
Q Consensus 195 ~S~~~~~~~~G~---~v~~v~~~~--~g~~D~~~Le~~l~~~---~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~ 266 (476)
+|+.|+++++|+ +++.||++. +++||+++|+++|+++ +..|++|++|.|||.+|++|||++|+++|++||+
T Consensus 240 ~Sv~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~~~~g~- 318 (539)
T PLN02590 240 SSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDPLVPLGNIAKKYGI- 318 (539)
T ss_pred HHHHHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCC-
Confidence 999999999999 599999984 5799999999999764 4579999999999999999999999999999999
Q ss_pred CCceEEEEecCcccccccccccCCCCCCcccccEEEEcCCCCCCCCCCceeEEeehh--hhhhhcCCccccCC-------
Q 011842 267 QDRFYIHCDGALFGLMMPFVKKAPKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRME--HINVLSSNVEYLAS------- 337 (476)
Q Consensus 267 ~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~--~~~~l~~~~~yl~~------- 337 (476)
|+||||||||+++.+.++...+.+.+.+|||++++|||+++|++||++++|++ +.+++...+.|+..
T Consensus 319 ----WlHVDaA~GG~al~~~~~r~~~~Gie~ADSit~D~HK~l~~p~~cg~llvr~~~~l~~a~~~~~~YL~~~~~~~~~ 394 (539)
T PLN02590 319 ----WLHVDAAYAGNACICPEYRKFIDGIENADSFNMNAHKWLFANQTCSPLWVKDRYSLIDALKTNPEYLEFKVSKKDT 394 (539)
T ss_pred ----eEEEecchhhhhhcChhhHHHhcCCccCCEEEECchhhcCcCcCEEEEEecCHHHHHHHhhcCHHHhCCccccccc
Confidence 99999999998776666555567778899999999999999999999999986 45667777788742
Q ss_pred ----CCCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCCeE-eecCCeeEEEEecCC---c--
Q 011842 338 ----RDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISA-MLNELSSTVVFERPQ---D-- 407 (476)
Q Consensus 338 ----~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~-~~~~~~~iv~f~~~~---~-- 407 (476)
.++++++||+ +.++++|.+|+.+|.+|++++++++.++|++|.+.|++.+.+. +.++..++|+|+..+ +
T Consensus 395 ~~d~~d~~i~lsRr-~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~~~~l~iVcFr~~~~~~~~~ 473 (539)
T PLN02590 395 VVNYKDWQISLSRR-FRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTRYFSLVCFRLAPVDGDED 473 (539)
T ss_pred CCCccccCCCCCCc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceEEEEEEecCCCCCHH
Confidence 2457889998 5789999999999999999999999999999999999976444 556678999998642 1
Q ss_pred --HHH----hhce------eec----ccCCEEEEE-EcCCCCHHHHHHHHHHHHHHHHHHHhcC
Q 011842 408 --EEF----VRRW------QLA----CQGNIAHVV-VMPNVTIDKLDDFLNELIENRSTWYEDG 454 (476)
Q Consensus 408 --~~~----~~~~------~l~----~~~~~lRv~-~~~~~T~edid~~~~~l~~~~~~~~~~~ 454 (476)
+.+ .+++ .+. .+...+|++ ++|.+|++||+.+++.|.+..+++.++.
T Consensus 474 ~~~~ln~~l~~~l~~~G~~~vs~t~~~g~~~lR~~i~n~~T~~~dv~~~~~~i~~~a~~~~~~~ 537 (539)
T PLN02590 474 QCNERNRELLAAVNSTGKIFISHTALSGKFVLRFAVGAPLTEEKHVTEAWQIIQKHASKFTRND 537 (539)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeeEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHhcccC
Confidence 111 1111 111 123578976 5899999999999999999988887653
No 5
>PLN02880 tyrosine decarboxylase
Probab=100.00 E-value=2.9e-53 Score=443.57 Aligned_cols=382 Identities=19% Similarity=0.257 Sum_probs=316.4
Q ss_pred ccccccCCCcccc----ccCCCCCcHHHHHHHHHHHHhcccccccCCCCcCCcc------hHHHHHHHHHhhCCCCCCcc
Q 011842 60 SCFSVTEPEADDE----FTGDKEAYMAGVLARYRKTLMERTKHHLGYPYNLDFD------YGALAQLQHFSINNLGDPFI 129 (476)
Q Consensus 60 ~~~~~~~p~~~~~----~~~~~~~~~~~il~~~~~~~~~~~~~~~g~p~~~~~~------~~~l~~~l~~~~n~~g~~~~ 129 (476)
+++...+|+++.. .+|++|.+++++++++.+.+.++.. +|+||+++++. .+.+++++...+|+++..|.
T Consensus 37 pv~~~~~p~~l~~~~~~~~p~~~~~~~~~l~~~~~~i~~~~~-~~~hP~f~~~~~~~~~~~~~lad~l~~~~n~~~~~~~ 115 (490)
T PLN02880 37 PVLSQVQPGYLRELLPDSAPNQPETLDQVLDDVQAKILPGVT-HWQSPNYFAYYPSNSSVAGFLGEMLSAGLNIVGFSWI 115 (490)
T ss_pred CCCCCCCHHHHHHhccccCCCCCCCHHHHHHHHHHHHhcCCC-CCCCCCeeEeccCCCcHHHHHHHHHHHhhccCCcccc
Confidence 3455566655543 6789999999999999999988886 68899998874 57899999999999999999
Q ss_pred cCccchhhHHHHHHHHHHHHHHcCCCCCc-----ccEEEcCCchhHHHHHHHHHHhhC---------CCcEEEecCCCch
Q 011842 130 ESNYGVHSRQFEVGVLDWFARLWELENNE-----YWGYITNCGTEGNLHGILVGREVF---------PDGILYASRESHY 195 (476)
Q Consensus 130 ~~~~~~~~~~le~~~~~~la~l~g~~~~~-----~~g~~t~ggt~An~~al~aa~~~~---------p~~~Vl~s~~~H~ 195 (476)
.+| ..+++|+++.+|+++++|++... .+|++|+|||+||++|+.+||++. ++.+||+|+.+|+
T Consensus 116 ~sp---~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~ 192 (490)
T PLN02880 116 TSP---AATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHS 192 (490)
T ss_pred cCc---ccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchH
Confidence 887 57899999999999999998531 469999999999999999999842 4568999999999
Q ss_pred HHHHHHHHcCCe---EEEEeCCC--CCccCHHHHHHHHHcC---CCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCC
Q 011842 196 SVFKAARMYRME---CVKVDCLI--SGEIDCADFKAKLLQN---KDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQ 267 (476)
Q Consensus 196 S~~~~~~~~G~~---v~~v~~~~--~g~~D~~~Le~~l~~~---~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~ 267 (476)
|+.|+++++|+. ++.||++. +++||+++|+++|+++ +..|++|++|.|||.+|++|||++|+++|++||+
T Consensus 193 Sv~Kaa~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDpl~eI~~i~~~~~i-- 270 (490)
T PLN02880 193 ALQKACQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDPLLELGKIAKSNGM-- 270 (490)
T ss_pred HHHHHHHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCcHHHHHHHHHHcCC--
Confidence 999999999994 89999975 5799999999999753 5679999999999999999999999999999999
Q ss_pred CceEEEEecCcccccccccccCCCCCCcccccEEEEcCCCCCCCCCCceeEEeehh--hhhhhcCCccccCCC-------
Q 011842 268 DRFYIHCDGALFGLMMPFVKKAPKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRME--HINVLSSNVEYLASR------- 338 (476)
Q Consensus 268 ~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~--~~~~l~~~~~yl~~~------- 338 (476)
|+|||||||++++....+...+.+.+.+||+++++|||+++|++||++++|+. +.+.+.....|+...
T Consensus 271 ---wlHVDaA~gg~~~~~~~~~~~l~gie~aDSit~d~HKwl~~P~~~g~llvr~~~~l~~~~~~~~~Yl~~~~~~~~~~ 347 (490)
T PLN02880 271 ---WFHVDAAYAGSACICPEYRHYIDGVEEADSFNMNAHKWFLTNFDCSLLWVKDRNALIQSLSTNPEFLKNKASQANSV 347 (490)
T ss_pred ---EEEEehhhHHHHHhCHHHHHHhcCchhcCEEEECchhhcCCCccEEEEEEeCHHHHHHHHccCHHHhcCccccccCC
Confidence 99999999998765544444466667799999999999999999999999975 346676777777542
Q ss_pred ----CCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcC-CeEeecCCeeEEEEecCCc------
Q 011842 339 ----DATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAG-ISAMLNELSSTVVFERPQD------ 407 (476)
Q Consensus 339 ----~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g-~~~~~~~~~~iv~f~~~~~------ 407 (476)
+.++..||+ +.++++|.+++.+|.++++++++++.++++++.+.|++.+ +.++.++..++|+|+.++.
T Consensus 348 ~~~~~~~i~~~rr-~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~~~~~iv~Fr~~~~~~~~~~ 426 (490)
T PLN02880 348 VDYKDWQIPLGRR-FRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTPRIFSLVCFRLVPPKNNEDN 426 (490)
T ss_pred CChhccCcCCCCc-ccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCceEEEEEEEeCCCCChhh
Confidence 234667776 4579999999999999999999999999999999998875 4444566789999997531
Q ss_pred -H----HHhhce------eec----ccCCEEEEEE-cCCCCHHHHHHHHHHHHHHHHHHH
Q 011842 408 -E----EFVRRW------QLA----CQGNIAHVVV-MPNVTIDKLDDFLNELIENRSTWY 451 (476)
Q Consensus 408 -~----~~~~~~------~l~----~~~~~lRv~~-~~~~T~edid~~~~~l~~~~~~~~ 451 (476)
+ .+.+++ .+. .+..++|+++ +|.+|.+||+.+++.|.++.+++.
T Consensus 427 ~~~~n~~l~~~l~~~g~~~v~~t~~~g~~~lR~~~~n~~tt~~di~~~~~~i~~~~~~~~ 486 (490)
T PLN02880 427 GNKLNHDLLDAVNSSGKIFISHTVLSGKYVLRFAVGAPLTEERHVTAAWKVLQDEASKLL 486 (490)
T ss_pred HHHHHHHHHHHHHhCCCEEEEEEEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 1 122221 121 2346889875 788889999999999999988764
No 6
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=100.00 E-value=3.6e-54 Score=416.83 Aligned_cols=414 Identities=27% Similarity=0.330 Sum_probs=335.7
Q ss_pred ccccCCCCCcccccccCCCCccccccccccCCccceeeeccCCcccccccccCCCcccc----ccCCCCCcHHHHHHHHH
Q 011842 14 AEKFGPVFDPTAVVAEPVPPVVTENGHELKHKTAEKEIVLGKNVHASCFSVTEPEADDE----FTGDKEAYMAGVLARYR 89 (476)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~----~~~~~~~~~~~il~~~~ 89 (476)
.+.+..++++.+++ ++.++.|.+...+ .+.-|.+...|.++|.+|+.+.+ ++++++.+.++|+++++
T Consensus 20 ~D~L~~~~~~~~~t-e~fl~~v~~~ll~--------~v~~~~dr~~kv~~fhhP~~L~~l~nlel~~~~esl~qil~~cr 90 (510)
T KOG0629|consen 20 RDLLPDDVAGEEVT-EPFLRAVVDILLD--------YVKKGFDRSQKVLDFHHPDELKELFNLELRDQPESLAQILEDCR 90 (510)
T ss_pred hhccccccCCchhh-HhhhHHHHHHHHH--------hhccCCcccceeecccChHHHHHHhCcccCCChhhHHHHHHHHH
Confidence 45677888888888 5555554444431 13445677789999999999986 89999999999999999
Q ss_pred HHHhcccccccCCCCcCCc-----c-hHHHHHHHHHhhCCCCCCcccCccchhhHHHHHHHHHHHHHHcCCCCCcccEEE
Q 011842 90 KTLMERTKHHLGYPYNLDF-----D-YGALAQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELENNEYWGYI 163 (476)
Q Consensus 90 ~~~~~~~~~~~g~p~~~~~-----~-~~~l~~~l~~~~n~~g~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~g~~ 163 (476)
+.+..+.+. |||++++. + .+..++++.+..|.+..+++..| ...-+|.++...+.++.|++.. .++||
T Consensus 91 ~tl~y~vKT--gHprffNQl~~glD~~~Lag~wlT~t~Ntn~~TYEiAP---vF~lmE~~vl~km~~ivGw~~~-~DgIf 164 (510)
T KOG0629|consen 91 DTLKYSVKT--GHPRFFNQLSSGLDPIGLAGEWLTSTANTNMFTYEIAP---VFVLMEEEVLAKMREIVGWEEG-GDGIF 164 (510)
T ss_pred HHHHhhhcc--CCCcchhhhccCCCHHHHHHHHHHhccCCCCceEEecc---eEEeehHHHHHHHHHHhCCCCC-CCcee
Confidence 999999875 89998743 3 56677888888888888888777 4668899999999999999964 67999
Q ss_pred cCCchhHHHHHHHHHHhh------------CCCcEEEecCCCchHHHHHHHHcCC---eEEEEeCCCCCccCHHHHHHHH
Q 011842 164 TNCGTEGNLHGILVGREV------------FPDGILYASRESHYSVFKAARMYRM---ECVKVDCLISGEIDCADFKAKL 228 (476)
Q Consensus 164 t~ggt~An~~al~aa~~~------------~p~~~Vl~s~~~H~S~~~~~~~~G~---~v~~v~~~~~g~~D~~~Le~~l 228 (476)
++||+.+|++++.+||.. .|..++++|+.+|||+.++++++|+ +++.|++++.|.|++++||+.|
T Consensus 165 ~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~kaAa~lg~gtd~c~~v~t~e~Gkm~~~dLe~ki 244 (510)
T KOG0629|consen 165 APGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIKKAAAFLGLGTDHCIKVKTDERGKMIPDDLEKKI 244 (510)
T ss_pred cCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHHHHHHHhccCCceeEEecccccCccchHHHHHHH
Confidence 999999999999999874 3567899999999999999999995 7999999999999999999999
Q ss_pred HcCCC---CcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCcccccEEEEcC
Q 011842 229 LQNKD---KPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKPIGSVSVSG 305 (476)
Q Consensus 229 ~~~~~---~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~~Dsi~~s~ 305 (476)
.++.. .|++|.+|+|||+.|++|||..|+++|++|++ |+|||+||||+.+-+.++..++++.+++||+++++
T Consensus 245 le~k~kg~~Pf~vnaTaGTTV~GAFDdL~~iadiC~k~~l-----WmHvDAAwGGglLmS~k~R~kl~Giera~Svtwnp 319 (510)
T KOG0629|consen 245 LEAKAKGGVPFFVNATAGTTVLGAFDDLNGIADICEKHKL-----WMHVDAAWGGGLLMSRKHRHKLTGIERANSVTWNP 319 (510)
T ss_pred HHHHhcCCCCeEEEecCCceeeeccCcHHHHHHHHHhcCE-----EEEeecccccccccChhhHhhccCccccCceeecH
Confidence 76543 59999999999999999999999999999999 99999999998777777777899999999999999
Q ss_pred CCCCCCCCCceeEEeehhh-h-hhhcCCccccCCCC-----------CcccCCCCChhHHHHHHHHHHhChhcHHHHHHH
Q 011842 306 HKFVGCPMPCGVQITRMEH-I-NVLSSNVEYLASRD-----------ATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQK 372 (476)
Q Consensus 306 hK~l~~p~~~G~l~~~~~~-~-~~l~~~~~yl~~~~-----------~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~ 372 (476)
||++++|..||++++|.+. + +.-...+.|+++.+ ..++++|.. ..+++|.+|++.|.+|+++.+++
T Consensus 320 HK~~gaplqCsa~l~r~~gll~~Cn~~~A~YLFq~dK~YdvS~DTgdK~iQCGRh~-D~FKlWlmwkaKG~~Gfe~~v~k 398 (510)
T KOG0629|consen 320 HKLMGAPLQCSAFLTREEGLLQRCNQMSAIYLFQQDKFYDVSYDTGDKAIQCGRHV-DVFKLWLMWKAKGTQGFEAQVDK 398 (510)
T ss_pred HHhhcCcchhhHHHHHHHHHHHhhcccchhhhhccCceeecccccccchhhcCccc-cHHHHHHHHHhcccccHHHHHHH
Confidence 9999999999999999873 3 33355667777653 456788764 47899999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCeEee---cCC-eeEEEEecCCc-------HHHhhcee-e-------------------c--cc
Q 011842 373 CLRNAHYLKDRLLDAGISAML---NEL-SSTVVFERPQD-------EEFVRRWQ-L-------------------A--CQ 419 (476)
Q Consensus 373 ~~~~a~~l~~~L~~~g~~~~~---~~~-~~iv~f~~~~~-------~~~~~~~~-l-------------------~--~~ 419 (476)
+.++|+||.++|++.+.+.++ .|. .++.++.+|.. .+...++. + + ..
T Consensus 399 ~~~lA~yl~~~lrer~~~~~l~~~~pe~~nv~fw~vp~~lR~~~~~~e~~~rL~kVaPkIK~~Mm~~Gt~Mi~YqPl~~~ 478 (510)
T KOG0629|consen 399 CLRLAEYLYDRLREREGFEMLFELEPEHVNVCFWYVPPSLRGWQENPERDSRLVKVAPKIKERMMKKGTTMIGYQPLGDK 478 (510)
T ss_pred HHHHHHHHHHHHHhcccceehhcCCCceEEEeeccCchHhccCcccchhhhHHHhhCcHHHHHHHhccceeeEecccccc
Confidence 999999999999998765443 244 34444444421 11111111 0 1 12
Q ss_pred CCEEEEEE-cCCCCHHHHHHHHHHHHHHHH
Q 011842 420 GNIAHVVV-MPNVTIDKLDDFLNELIENRS 448 (476)
Q Consensus 420 ~~~lRv~~-~~~~T~edid~~~~~l~~~~~ 448 (476)
.+.+|+++ ++..|.+|+|.+++.|..+.+
T Consensus 479 ~nffr~v~sn~a~~~ad~dflldEIerlgq 508 (510)
T KOG0629|consen 479 PNFFRMVISNPALTEADLDFLLDEIERLGQ 508 (510)
T ss_pred cchhheecccchhhhhhHHHHHHHHHHhcc
Confidence 36788765 566799999999999987653
No 7
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=100.00 E-value=2.2e-51 Score=416.10 Aligned_cols=323 Identities=28% Similarity=0.432 Sum_probs=271.7
Q ss_pred cccCCCCCcHHHHHHHHHHHHhcccccccCCCCcCCcc------hHHHHHHHHHhhCCCCCCcccCccchhhHHHHHHHH
Q 011842 72 EFTGDKEAYMAGVLARYRKTLMERTKHHLGYPYNLDFD------YGALAQLQHFSINNLGDPFIESNYGVHSRQFEVGVL 145 (476)
Q Consensus 72 ~~~~~~~~~~~~il~~~~~~~~~~~~~~~g~p~~~~~~------~~~l~~~l~~~~n~~g~~~~~~~~~~~~~~le~~~~ 145 (476)
.++|++|.+.+++++++.+.+.++.+ +|.||+++++. .+.+++++...+|+++..+..+| ..+++|+++.
T Consensus 10 ~~lp~~~~~~~~vl~~~~~~l~~~~~-~~~~P~~~~~~~~~~~~~~i~~~~l~~~~n~n~~~~~~~P---~~~~~E~~vi 85 (373)
T PF00282_consen 10 EELPEEGESLEEVLKDLREILAPGVT-HWHHPRFFGFVPGGPSPASILADLLASALNQNGFTWEASP---AATEIEREVI 85 (373)
T ss_dssp CCHHSSHH-HHHHHHHHHHHTHGCS--TTTSTTBESSSHT--CHHHHHHHHHHHHHT-BTTSTTTSH---HHHHHHHHHH
T ss_pred cccccCCCCHHHHHHHHHHHhhccCC-CCCChhHhhhccCCccHHHHHHHHHHhhhccccccccccc---ccccchHHHH
Confidence 48899999999999999999999876 68889998875 57889999999999888888876 6789999999
Q ss_pred HHHHHHcCCCCC-----cccEEEcCCchhHHHHHHHHHHhhC------------CCcEEEecCCCchHHHHHHHHcCCeE
Q 011842 146 DWFARLWELENN-----EYWGYITNCGTEGNLHGILVGREVF------------PDGILYASRESHYSVFKAARMYRMEC 208 (476)
Q Consensus 146 ~~la~l~g~~~~-----~~~g~~t~ggt~An~~al~aa~~~~------------p~~~Vl~s~~~H~S~~~~~~~~G~~v 208 (476)
+|+++++|++.+ ..+|++|+|||+||++|++++|++. ++.+||+|+.+|||+.|+++++|+.+
T Consensus 86 ~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~~Kaa~~lGlg~ 165 (373)
T PF00282_consen 86 RWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYSIEKAARILGLGV 165 (373)
T ss_dssp HHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THHHHHHHHTTSEE
T ss_pred HHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccHHHHhcceeeeEE
Confidence 999999999932 2579999999999999999998741 34689999999999999999999999
Q ss_pred EEEeCCCCCccCHHHHHHHHHcC---CCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccc
Q 011842 209 VKVDCLISGEIDCADFKAKLLQN---KDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPF 285 (476)
Q Consensus 209 ~~v~~~~~g~~D~~~Le~~l~~~---~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~ 285 (476)
+.||++++++||+++|+++|+++ +..|++|++|.|||.+|++||+++|+++|++|++ |+|||+||||..+..
T Consensus 166 ~~I~~~~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~~~-----wlHVDaA~gg~~~~~ 240 (373)
T PF00282_consen 166 RKIPTDEDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICEKYNI-----WLHVDAAYGGSALLS 240 (373)
T ss_dssp EEE-BBTTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHHCT------EEEEEETTGGGGGGH
T ss_pred EEecCCcchhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhccccce-----eeeeccccccccccc
Confidence 99999999999999999999754 4568899999999999999999999999999999 999999999854433
Q ss_pred cccCCCCCCcccccEEEEcCCCCCCCCCCceeEEeehhh--hhhhcCCccccCCC-----------CCcccCCCCChhHH
Q 011842 286 VKKAPKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEH--INVLSSNVEYLASR-----------DATIMGSRNGHAPI 352 (476)
Q Consensus 286 ~~~~~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~--~~~l~~~~~yl~~~-----------~~~~~~sr~~~~~l 352 (476)
........+.+.+|||++|+|||+++|++||++++|++. ...+...+.|+... +.++++|| +..++
T Consensus 241 ~~~~~~~~gi~~adSit~d~HK~l~~P~~~~~~l~r~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~tl~~SR-~~~al 319 (373)
T PF00282_consen 241 PEYRHLLFGIERADSITIDPHKWLGVPYGCGVLLVRDKSDLRDAFSINADYLGNDDRESDESYDYGDYTLQGSR-RFRAL 319 (373)
T ss_dssp CTTGGGGTTGGGESEEEEETTTTTS-SSS-EEEEESSGGGHHGGGEEEETCTT-S-SSS-GGGCEEEGSSSSSG-HHHHH
T ss_pred ccccccccccccccccccchhhhhcCCccceeEEeecccchHHHhccChhhhcccccccccccccccccccccc-cchHH
Confidence 333334666778999999999999999999999999873 34566678898832 35789999 67899
Q ss_pred HHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCCeEee-cCCeeEEEEec
Q 011842 353 FLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAML-NELSSTVVFER 404 (476)
Q Consensus 353 ~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~-~~~~~iv~f~~ 404 (476)
++|.+|+.+|.+|+++++++..+++++|.++|++.+.+.+. ++..++|+|+.
T Consensus 320 k~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~~~~~~~vcFr~ 372 (373)
T PF00282_consen 320 KLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELVNEPDLNIVCFRY 372 (373)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSTTSSSEEEEEE
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEcCCCceEEEEEe
Confidence 99999999999999999999999999999999998866665 56689999985
No 8
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=100.00 E-value=2.2e-48 Score=407.60 Aligned_cols=334 Identities=19% Similarity=0.243 Sum_probs=280.5
Q ss_pred ccccccCCCccccccCCCCCcHHHHHHHHHHHHhcccccccCCCCcCCcchH-------HHHHHHHHhhCCCCCCcccCc
Q 011842 60 SCFSVTEPEADDEFTGDKEAYMAGVLARYRKTLMERTKHHLGYPYNLDFDYG-------ALAQLQHFSINNLGDPFIESN 132 (476)
Q Consensus 60 ~~~~~~~p~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~g~p~~~~~~~~-------~l~~~l~~~~n~~g~~~~~~~ 132 (476)
+.+.-.+|.+....+|+.|...+++++++.+.+.+++. +|.||+++++.++ .+++ +..++|+++..|+.+|
T Consensus 48 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~hP~f~g~~~~~~p~~~~~l~~-l~~~lN~n~~~~~~sp 125 (522)
T TIGR03799 48 KPLSEIEKDFSSAEIPEQPTFVSEHTQFLLDKLVAHSV-HTASPSFIGHMTSALPYFMLPLSK-LMVALNQNLVKIETSK 125 (522)
T ss_pred CCchhhhhcccccCCCCCCCChHHHHHHHHHHHHcCCC-CCCCCCeEEeccCCCchHHHHHHH-HHHHhcCCcceeecCc
Confidence 44555566666678999999999999999988888765 7899999987522 2455 5567998888999888
Q ss_pred cchhhHHHHHHHHHHHHHHcCCC-----------CCcccEEEcCCchhHHHHHHHHHHhhC-------------------
Q 011842 133 YGVHSRQFEVGVLDWFARLWELE-----------NNEYWGYITNCGTEGNLHGILVGREVF------------------- 182 (476)
Q Consensus 133 ~~~~~~~le~~~~~~la~l~g~~-----------~~~~~g~~t~ggt~An~~al~aa~~~~------------------- 182 (476)
..+++|+++.+|++++++.. ++..+|++|+|||+||++|+++||++.
T Consensus 126 ---a~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~ 202 (522)
T TIGR03799 126 ---AFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAAL 202 (522)
T ss_pred ---chHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhh
Confidence 57899999999999998521 233679999999999999999999852
Q ss_pred -----CCcEEEecCCCchHHHHHHHHcCC---eEEEEeCCCCCccCHHHHHHHHHc---CCCCcEEEEEeeCCCcccccc
Q 011842 183 -----PDGILYASRESHYSVFKAARMYRM---ECVKVDCLISGEIDCADFKAKLLQ---NKDKPAIINVNIGTTVKGAVD 251 (476)
Q Consensus 183 -----p~~~Vl~s~~~H~S~~~~~~~~G~---~v~~v~~~~~g~~D~~~Le~~l~~---~~~~p~~vv~t~gtt~tG~id 251 (476)
++.+||+|+.+|+|+.|+++++|+ +++.||+|++|+||+++|+++|++ ...+|++|+.++|||.+|++|
T Consensus 203 ~~~~~~~~~v~~S~~~H~S~~kaa~~lglg~~~v~~vp~d~~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~tGaiD 282 (522)
T TIGR03799 203 KHYGYDGLAILVSERGHYSLGKAADVLGIGRDNLIAIKTDANNRIDVDALRDKCAELAEQNIKPLAIVGVAGTTETGNID 282 (522)
T ss_pred hhccCCceEEEECCCchHHHHHHHHHcCCCcccEEEEEeCCCCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcCCCCcC
Confidence 245899999999999999999999 799999999999999999999974 344688899999999999999
Q ss_pred CHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCcccccEEEEcCCCCCCCCCCceeEEeehh-hhhhhcC
Q 011842 252 DLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRME-HINVLSS 330 (476)
Q Consensus 252 ~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~-~~~~l~~ 330 (476)
||++|+++|++||+ |+|||+||+++.++..++...+.+.+.+||+++|+|||+++|++||++++|++ +.+.+..
T Consensus 283 pl~eIa~i~~~~g~-----~lHVDaA~gg~~~~~~~~r~~l~gle~aDSit~d~HK~l~~P~g~G~llvr~~~~~~~~~~ 357 (522)
T TIGR03799 283 PLDEMADIAQELGC-----HFHVDAAWGGATLLSNTYRHLLKGIERADSVTIDAHKQLYVPMGAGMVLFKDPALMSAIEH 357 (522)
T ss_pred CHHHHHHHHHHcCC-----eEEEEchhhhHHHhCHHHHHHhcCchhCCEEEEChhhcCCcCcccEEEEEeCHHHHHHhcc
Confidence 99999999999999 99999999987665544444456666799999999999999999999999975 5566777
Q ss_pred CccccCC------CCCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcC-CeEeecCCeeEEEEe
Q 011842 331 NVEYLAS------RDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAG-ISAMLNELSSTVVFE 403 (476)
Q Consensus 331 ~~~yl~~------~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g-~~~~~~~~~~iv~f~ 403 (476)
.+.|+.. .+.++++||++. ++++|++++.+|.+|+++++++..+++++|.+.|++.+ +.++.++..++|+|+
T Consensus 358 ~~~Yl~~~~~~d~~~~~legsR~~~-al~lw~aL~~lG~~G~~~ii~~~~~la~~l~~~L~~~~~~el~~~p~l~iv~Fr 436 (522)
T TIGR03799 358 HAEYILRKGSKDLGSHTLEGSRPGM-AMLVYAGLHIIGRKGYELLIDQSIEKAKYFADLIQQQPDFELVTEPELCLLTYR 436 (522)
T ss_pred CcchhcCCCCCccccceeecCcchH-HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEecCCCccEEEEE
Confidence 7788742 135788999866 68999999999999999999999999999999999875 444455668999998
Q ss_pred c
Q 011842 404 R 404 (476)
Q Consensus 404 ~ 404 (476)
.
T Consensus 437 ~ 437 (522)
T TIGR03799 437 Y 437 (522)
T ss_pred E
Confidence 5
No 9
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=100.00 E-value=3.3e-46 Score=384.69 Aligned_cols=325 Identities=26% Similarity=0.357 Sum_probs=281.5
Q ss_pred cccCCCCCcHHHHHHHHHHHHhcccccccCCCCcCCc------chHHHHHHHHHhhCCCCCCcccCccchhhHHHHHHHH
Q 011842 72 EFTGDKEAYMAGVLARYRKTLMERTKHHLGYPYNLDF------DYGALAQLQHFSINNLGDPFIESNYGVHSRQFEVGVL 145 (476)
Q Consensus 72 ~~~~~~~~~~~~il~~~~~~~~~~~~~~~g~p~~~~~------~~~~l~~~l~~~~n~~g~~~~~~~~~~~~~~le~~~~ 145 (476)
...|+.+.+.+.++.++............|+|.+..+ ++..+.+++...++.+...+..++ +++++|+++.
T Consensus 31 ~~~p~~g~p~~~v~~~l~~~~~~d~~~~~~~p~~~~~~~~~~~~~~~a~~~~~~~~~~nl~d~~~~p---~a~~~E~~~v 107 (460)
T COG0076 31 RMAPEKGEPLEEVLDELAELLIKDELYLDGHPRANLAGFCPTRVPPVAAELLVSALNKNLGDPDESP---AAAELEERVV 107 (460)
T ss_pred ccCCccCCchhhHHHHHHHHhhcccccccCCcceEEEccCCCCCHHHHHHHHHHHHhhcCCCcccCh---hHHHHHHHHH
Confidence 3789999999999999998855555556677886543 367788888888886666676676 6889999999
Q ss_pred HHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCC------------CcEEEecCCCchHHHHHHHHcCCeEEEEeC
Q 011842 146 DWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFP------------DGILYASRESHYSVFKAARMYRMECVKVDC 213 (476)
Q Consensus 146 ~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p------------~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~ 213 (476)
.|+++++|++ +...|+||+|||+||++|++++|++.. .++||+|..+|+|+.|+++++|++.+.+++
T Consensus 108 ~~l~~l~~~~-~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v~~ 186 (460)
T COG0076 108 NMLSDLLGAP-EEASGTFTSGGTEANLLALLAARERWRKRALAESGKPGGKPNIVCSETAHFSFEKAARYLGLGLRRVPT 186 (460)
T ss_pred HHHHHHhCCC-CCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcccccCCCCeEEecCcchhHHHHHHHHhCCCceeEEe
Confidence 9999999998 457899999999999999999988532 237999999999999999999999999999
Q ss_pred CC-CCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCC
Q 011842 214 LI-SGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKV 292 (476)
Q Consensus 214 ~~-~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~ 292 (476)
++ +.+||+++|+++|++++-.. +|+.+.|||++|.+|||++|+++|+++++ |+|||+|+||+++|+..+...+
T Consensus 187 ~~~~~~id~~~l~~~i~~~t~~g-~vV~~aGtT~~G~iDdi~~ia~ia~~~~i-----~lHVDAA~GG~~~pf~~~~~~~ 260 (460)
T COG0076 187 VPTDYRIDVDALEEAIDENTIGG-VVVGTAGTTDTGSIDDIEELADIAEEYGI-----WLHVDAAFGGFLLPFLEPDGRW 260 (460)
T ss_pred ccCccccCHHHHHHHHHhhccCc-eEEEEecCCCCCccCCHHHHHHHHHHcCC-----cEEEEccccceeecccCccchh
Confidence 87 79999999999999987533 58999999999999999999999999999 9999999999999999988775
Q ss_pred CC-cccccEEEEcCCCCCCCCCCceeEEeehh--hhhhhcCCccccCC---CCCcccCCCCChhHHHHHHHHHHhChhcH
Q 011842 293 SF-KKPIGSVSVSGHKFVGCPMPCGVQITRME--HINVLSSNVEYLAS---RDATIMGSRNGHAPIFLWYTLNRKGYKGF 366 (476)
Q Consensus 293 ~~-~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~--~~~~l~~~~~yl~~---~~~~~~~sr~~~~~l~~~~~l~~~g~~g~ 366 (476)
++ .+++|||++|+|||+++|++||++++|++ +.+.+.....|+.+ ...++.+||++..++++|+.++.+|.+||
T Consensus 261 ~f~l~~vdSIt~d~HK~g~aP~~~G~il~rd~e~l~~~~~~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy 340 (460)
T COG0076 261 DFGLEGVDSITVDGHKYGLAPIGCGVVLFRDEEALRRILIFADYYLPGGGIPNFTILGSRPGRQALALYANLRRLGREGY 340 (460)
T ss_pred hcCCCCceEEEECcccccCCCCCceEEEEECHHHhhhhhhcccccCCCCCcCceeEeeccchHHHHHHHHHHHHhCHhHH
Confidence 54 45799999999999999999999999988 44555666667764 34678899999889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcC-CeEeecCCeeEEEEecCC
Q 011842 367 QKEVQKCLRNAHYLKDRLLDAG-ISAMLNELSSTVVFERPQ 406 (476)
Q Consensus 367 ~~~~~~~~~~a~~l~~~L~~~g-~~~~~~~~~~iv~f~~~~ 406 (476)
+++++++.+++++|.++|++.| +..+.+|..++|+|+.++
T Consensus 341 ~~l~~~~~~~a~~la~~l~~~~~~e~~~~p~l~~V~fr~~~ 381 (460)
T COG0076 341 RKLLDRTLELARYLAEELEKLGDFELVNEPELPIVAFRLKD 381 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCcEeecCCccceEEEEcCC
Confidence 9999999999999999999998 555566788999999754
No 10
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=100.00 E-value=1.9e-45 Score=378.22 Aligned_cols=364 Identities=22% Similarity=0.217 Sum_probs=291.8
Q ss_pred cccCCCCCcHHHHHHHHHHHHhcccccccCCCCcCCcc----hHHHHHHHHHhhC-CCCCCcccCccchhhHHHHHHHHH
Q 011842 72 EFTGDKEAYMAGVLARYRKTLMERTKHHLGYPYNLDFD----YGALAQLQHFSIN-NLGDPFIESNYGVHSRQFEVGVLD 146 (476)
Q Consensus 72 ~~~~~~~~~~~~il~~~~~~~~~~~~~~~g~p~~~~~~----~~~l~~~l~~~~n-~~g~~~~~~~~~~~~~~le~~~~~ 146 (476)
..+|+.|.+++++++.+...+... +-.||.++++. ...+.+++...++ +.+++ ..+ + ..+++|+++++
T Consensus 15 ~~~p~~~~~~~~~~~~~~~~iyld---~~a~~~~~~~~tt~~~p~~~~~~~~~l~~~~~np-~s~--~-~~~~le~~~~~ 87 (431)
T TIGR01788 15 YRMPEEEMPPDAAYQLIHDELSLD---GNPRLNLATFVTTWMEPEARKLMDETINKNMIDK-DEY--P-QTAEIENRCVN 87 (431)
T ss_pred ccCCCCCCCHHHHHHHHHHHhhhc---CCcceeeeeeeCCCCCHHHHHHHHHHHhcCCCCc-ccC--c-cHHHHHHHHHH
Confidence 478999999999999999876432 22467766553 3446677766676 44444 333 2 34599999999
Q ss_pred HHHHHcCCC-C-CcccEEEcCCchhHHHHHHHHHHhhC-----------CCcEEEecCCCchHHHHHHHHcCCeEEEEeC
Q 011842 147 WFARLWELE-N-NEYWGYITNCGTEGNLHGILVGREVF-----------PDGILYASRESHYSVFKAARMYRMECVKVDC 213 (476)
Q Consensus 147 ~la~l~g~~-~-~~~~g~~t~ggt~An~~al~aa~~~~-----------p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~ 213 (476)
|+++++|++ + ++..+++|+||||||++|+.++++.. ++.+||+++.+|+|+.++++++|++++.||+
T Consensus 88 ~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~ka~~~lg~~v~~i~~ 167 (431)
T TIGR01788 88 MLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAAGKPTDKPNLVMGSNVQVCWEKFARYFDVELREVPM 167 (431)
T ss_pred HHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCcchHHHHHHHHHcCceeEEEec
Confidence 999999998 3 35667889999999999998887421 1348999999999999999999999999999
Q ss_pred CCC-CccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHh------CCCCCceEEEEecCccccccccc
Q 011842 214 LIS-GEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEES------GFTQDRFYIHCDGALFGLMMPFV 286 (476)
Q Consensus 214 ~~~-g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~------g~~~~~~~lhvD~a~~g~~~~~~ 286 (476)
+++ +.+|+++|+++|++++ .+|++++++|.+|++||+++|+++|+++ |+ |+|||+||+|+.+|+.
T Consensus 168 d~~~~~vd~~~L~~~i~~~t---~lV~~t~g~t~tG~idpi~~I~~i~~~~~~~~~~~~-----~~HvDaaq~g~~~p~~ 239 (431)
T TIGR01788 168 DPGRYVIDPEQVVEAVDENT---IGVVCILGTTYTGEYEDVKALNDALDEYNAKTGWDI-----PIHVDAASGGFIAPFV 239 (431)
T ss_pred CCCceeeCHHHHHHHHhhCC---eEEEEEeCCCCCcccCCHHHHHHHHHHHHhhhCCCc-----eEEEecccHHHHHHHh
Confidence 875 5899999999998775 4899999999999999999999999999 89 9999999998887654
Q ss_pred ccCCCCCCc-ccccEEEEcCCCCCCCCCCceeEEeehh--hhhhhcCCccccCCC--CCcccCCCCChhHHHHHHHHHHh
Q 011842 287 KKAPKVSFK-KPIGSVSVSGHKFVGCPMPCGVQITRME--HINVLSSNVEYLASR--DATIMGSRNGHAPIFLWYTLNRK 361 (476)
Q Consensus 287 ~~~~~~~~~-~~~Dsi~~s~hK~l~~p~~~G~l~~~~~--~~~~l~~~~~yl~~~--~~~~~~sr~~~~~l~~~~~l~~~ 361 (476)
.....+++. +.+||+++|+|||+++|.++|++++|++ +...+...++|+... +.++.+||++..+++.|..++.+
T Consensus 240 ~~~~~~~~~~~~~DSis~s~HK~~~~P~g~G~l~~r~~~~l~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~l~~l 319 (431)
T TIGR01788 240 YPDLEWDFRLPRVKSINVSGHKYGLVYPGVGWVIWRDEEALPEELIFHVNYLGGDEPTFTLNFSRPANQVIAQYYNFLRL 319 (431)
T ss_pred CCCchhhcCCCCceEEEECchhccCCCCCcEEEEEeChHHcchhheecccccCCCCCCcceecCchHHHHHHHHHHHHHh
Confidence 443334443 4599999999999988999999999986 335566667788653 35788999887788999999999
Q ss_pred ChhcHHHHHHHHHHHHHHHHHHHHhcCCeEee-c-CCeeEEEEecCC------c-HHHh-----hceeecc--------c
Q 011842 362 GYKGFQKEVQKCLRNAHYLKDRLLDAGISAML-N-ELSSTVVFERPQ------D-EEFV-----RRWQLAC--------Q 419 (476)
Q Consensus 362 g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~-~-~~~~iv~f~~~~------~-~~~~-----~~~~l~~--------~ 419 (476)
|..|++++++++.+++++|.++|++.+.+.+. + +..++|+|+..+ + .++. ++|.+.+ .
T Consensus 320 G~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~~~~~~~iV~Fr~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~p~~~~~ 399 (431)
T TIGR01788 320 GREGYRKIMQNSLDVARYLAEEIAKLGPFEIISDGSGIPLVAFKLKDDADPGYTLYDLSHRLRERGWIVPAYTLPKNAED 399 (431)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeCCCCceEEEEEeCCCCCCCcCHHHHHHHHHHCCCcccCCCCCCccCC
Confidence 99999999999999999999999998755544 3 568999998653 1 1222 3443311 2
Q ss_pred CCEEEEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 011842 420 GNIAHVVVMPNVTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 420 ~~~lRv~~~~~~T~edid~~~~~l~~~~~~~ 450 (476)
...+|++++++++++.+++|+++|+++...+
T Consensus 400 ~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (431)
T TIGR01788 400 IVVMRIVVREGFSRDLAELLIEDIEAALAYL 430 (431)
T ss_pred eEEEEEEecCCCCHHHHHHHHHHHHHHHHhh
Confidence 2468999999999999999999999987653
No 11
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=100.00 E-value=2.8e-44 Score=379.32 Aligned_cols=322 Identities=22% Similarity=0.247 Sum_probs=267.9
Q ss_pred cCCCCCcHHHHHHHHHHHHhcccccccCCC-CcCCcc------hHHHHHHHHHhhCCCCCCcccCccchhhHHHHHHHHH
Q 011842 74 TGDKEAYMAGVLARYRKTLMERTKHHLGYP-YNLDFD------YGALAQLQHFSINNLGDPFIESNYGVHSRQFEVGVLD 146 (476)
Q Consensus 74 ~~~~~~~~~~il~~~~~~~~~~~~~~~g~p-~~~~~~------~~~l~~~l~~~~n~~g~~~~~~~~~~~~~~le~~~~~ 146 (476)
..+....++++++++.+.+..++. .|.|| +++++. ++.+++++...+|+++..|+.+| .++.+|+++.+
T Consensus 55 ~~~~~~~~~~~l~~l~~~l~~~sv-~~~~P~ry~ghm~~~~~~paila~~~a~~~N~n~~~~e~SP---~~t~lE~~vi~ 130 (608)
T TIGR03811 55 FTKTVNNMKDVLDELSSRLRTESV-PWHSAGRYWGHMNSETLMPAILAYNYAMLWNGNNVAYESSP---ATSQMEEEVGK 130 (608)
T ss_pred cccCccCHHHHHHHHHHHHhcCCC-CCCCccceEEECcCCCCHHHHHHHHHHHHhCCCCCccccCc---hHHHHHHHHHH
Confidence 444555689999999998877664 56778 777663 68899999999999999999888 67899999999
Q ss_pred HHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhC--C-----------------------------------------
Q 011842 147 WFARLWELENNEYWGYITNCGTEGNLHGILVGREVF--P----------------------------------------- 183 (476)
Q Consensus 147 ~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~--p----------------------------------------- 183 (476)
|+++++|++. .+|+||+|||+||+.|+++||+.. |
T Consensus 131 ~la~l~G~~~--~~G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~ 208 (608)
T TIGR03811 131 EFATLMGYKN--GWGHIVADGSLANLEGLWYARNIKSLPFAMKEVKPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEI 208 (608)
T ss_pred HHHHHhCCCC--CCeEEeCChHHHHHHHHHHHHHhhhccchhhhccccccccccchhhcccccccccccccccccchhhh
Confidence 9999999985 579999999999999999999842 1
Q ss_pred ------------C-cEEEecCCCchHHHHHHHHcCC---eEEEEeCCCCCccCHHHHHHHHHcC---CCCcEEEEEeeCC
Q 011842 184 ------------D-GILYASRESHYSVFKAARMYRM---ECVKVDCLISGEIDCADFKAKLLQN---KDKPAIINVNIGT 244 (476)
Q Consensus 184 ------------~-~~Vl~s~~~H~S~~~~~~~~G~---~v~~v~~~~~g~~D~~~Le~~l~~~---~~~p~~vv~t~gt 244 (476)
. .++++++.+|||+.|+++++|+ +++.||+|++++||+++|+++|++. +..|++||+|.||
T Consensus 209 ~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~ilGlG~~~vv~VpvD~~~rmd~~~L~~~I~~~~~~g~p~~~VVataGT 288 (608)
T TIGR03811 209 KAHSARSGKDLQKLGKWLVPQTKHYSWLKAADIIGIGLDQVIPVPVDSNYRMDINELEKIIRKLAAEKTPILGVVGVVGS 288 (608)
T ss_pred hhhccccccccccceEEEECCCccHHHHHHHHHcCCCcccEEEeecCCCCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCC
Confidence 0 1689999999999999999999 5999999999999999999999753 3345789999999
Q ss_pred CccccccCHHHHHHHH---HHhCCCCCceEEEEecCccccccc-cc-------------------------------ccC
Q 011842 245 TVKGAVDDLDLVIQTL---EESGFTQDRFYIHCDGALFGLMMP-FV-------------------------------KKA 289 (476)
Q Consensus 245 t~tG~id~l~~I~~ia---~~~g~~~~~~~lhvD~a~~g~~~~-~~-------------------------------~~~ 289 (476)
|.+|++|||++|+++| +++|+ .||+||||||||++.. +. ...
T Consensus 289 T~~GaiDpl~eI~~l~~~~~~~gl---~~~lHVDAAyGG~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~ 365 (608)
T TIGR03811 289 TEEGAVDGIDKIVALRNKLMKEGI---YFYLHVDAAYGGYGRAIFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVY 365 (608)
T ss_pred cCCcccCCHHHHHHHHHHHHHcCC---ceeEeeeccccchhhhhhccccccccccchhhcccccccccccccccccHhHH
Confidence 9999999999999999 56776 3469999999986411 00 111
Q ss_pred CCCCCcccccEEEEcCCCCCCCCCCceeEEeehhh-hhhhcCCccccCCC---------CCcccCCCCChhHHHHHHHHH
Q 011842 290 PKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEH-INVLSSNVEYLASR---------DATIMGSRNGHAPIFLWYTLN 359 (476)
Q Consensus 290 ~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~-~~~l~~~~~yl~~~---------~~~~~~sr~~~~~l~~~~~l~ 359 (476)
..+.+.+.+|||++++|||+++|++||++++|++. .+.+...+.|++.. +.++.|||+++.++++|++++
T Consensus 366 ~~l~gle~ADSItvDpHK~g~~Py~~G~ll~Rd~~~~~~~~~~a~Yl~~~~~~~p~~~g~~~legSR~ga~AlklW~~lr 445 (608)
T TIGR03811 366 NAYKAISEAESVTIDPHKMGYIPYSAGGIVIQDIRMRDVISYFATYVFEKGADIPALLGAYILEGSKAGATAASVWAAHK 445 (608)
T ss_pred HHHhcCcCceEEEeCcccccccCCCeEEEEEeCHHHHHHHhcCcchhccccccCcccccccceecCCccHHHHHHHHHHH
Confidence 23445677999999999999999999999999874 45567778898632 235789999988999999999
Q ss_pred Hh--ChhcHHHHHHHHHHHHHHHHHHHHhcC-------CeE--eecCCeeEEEEec
Q 011842 360 RK--GYKGFQKEVQKCLRNAHYLKDRLLDAG-------ISA--MLNELSSTVVFER 404 (476)
Q Consensus 360 ~~--g~~g~~~~~~~~~~~a~~l~~~L~~~g-------~~~--~~~~~~~iv~f~~ 404 (476)
.+ |.+|+.++++++++++++|.+.|++.+ +.. +.+|..++|+|+.
T Consensus 446 ~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~~~~~~~~~~el~~~~~pdlniV~Fr~ 501 (608)
T TIGR03811 446 VLPLNVTGYGKLIGASIEGAHRFYDFLNNLEFKVGDKEIEVHPLTKPDFNMVDYVF 501 (608)
T ss_pred HHhcCHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCeeEEecCCCCcceEEEEE
Confidence 98 899999999999999999999998853 222 4567789999984
No 12
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=100.00 E-value=3.4e-43 Score=344.38 Aligned_cols=384 Identities=18% Similarity=0.234 Sum_probs=321.9
Q ss_pred ccccccCCCcccc----ccCCCCCcHHHHHHHHHHHHhcccccccCCCCcCCcc------hHHHHHHHHHhhCCCCCCcc
Q 011842 60 SCFSVTEPEADDE----FTGDKEAYMAGVLARYRKTLMERTKHHLGYPYNLDFD------YGALAQLQHFSINNLGDPFI 129 (476)
Q Consensus 60 ~~~~~~~p~~~~~----~~~~~~~~~~~il~~~~~~~~~~~~~~~g~p~~~~~~------~~~l~~~l~~~~n~~g~~~~ 129 (476)
+++.--+|..+.. ..|+++++.++|++++++.+.++.+ ||.||.++.+. ++.+++++..+++..|.+|.
T Consensus 28 ~v~P~v~PGYl~~llP~~aPe~pE~~~~Il~D~ekiI~PGit-Hw~hP~fhAyfpa~~s~~siladmLs~~i~~vGFtW~ 106 (511)
T KOG0628|consen 28 RVLPDVKPGYLRDLLPSKAPEKPESWEDILGDLEKIIMPGIT-HWQHPHFHAYFPAGNSYPSILADMLSGGIGCVGFTWA 106 (511)
T ss_pred CCCCCCCcchhhhhCCCCCCCChhhHHHHHHHHHHHccCCCc-ccCCCceeeEccCccchHHHHHHHHhcccccccceee
Confidence 4555566666664 7789999999999999999999997 79999998764 57899999999999999999
Q ss_pred cCccchhhHHHHHHHHHHHHHHcCCCCC-------cccEEEcCCchhHHHHHHHHHHhh-----------------CCCc
Q 011842 130 ESNYGVHSRQFEVGVLDWFARLWELENN-------EYWGYITNCGTEGNLHGILVGREV-----------------FPDG 185 (476)
Q Consensus 130 ~~~~~~~~~~le~~~~~~la~l~g~~~~-------~~~g~~t~ggt~An~~al~aa~~~-----------------~p~~ 185 (476)
++| ..++||..+.+|+++++++|.. +..|++-.++|++++.++.++|.. ..+.
T Consensus 107 ssP---a~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~l 183 (511)
T KOG0628|consen 107 SSP---ACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLARL 183 (511)
T ss_pred cCc---chHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhh
Confidence 998 6899999999999999998742 457899999999999999998863 1245
Q ss_pred EEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccCHHHHHHHHHcC---CCCcEEEEEeeCCCccccccCHHHHHHHHHH
Q 011842 186 ILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCADFKAKLLQN---KDKPAIINVNIGTTVKGAVDDLDLVIQTLEE 262 (476)
Q Consensus 186 ~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~~~Le~~l~~~---~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~ 262 (476)
++|+|+++|.|+.+++.+.|++++.++++.+..|+.+.|+++|+++ +..|++|++|.|||.+.++|+|.+|..+|++
T Consensus 184 V~Y~SDqahssveka~~i~~VklR~l~td~n~~mr~~~L~~AIe~D~arGlIPf~v~at~GTT~~ca~D~l~elg~Vc~~ 263 (511)
T KOG0628|consen 184 VAYCSDQAHSSVEKACLIAGVKLRALPTDENFGMRGDTLRKAIEEDIARGLIPFFVCATLGTTSSCAFDELEELGPVCRE 263 (511)
T ss_pred eEEecCcccchHHHhHhhcceeEEEeecccCcCCCHHHHHHHHHHHHhCCCccEEEEEeecCccccccccHHHhcchhhh
Confidence 8999999999999999999999999999999999999999999875 5689999999999999999999999999999
Q ss_pred hCCCCCceEEEEecCcccccccccccCCCCCCcccccEEEEcCCCCCCCCCCceeEEeehh--hhhhhcCCccccCCC--
Q 011842 263 SGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRME--HINVLSSNVEYLASR-- 338 (476)
Q Consensus 263 ~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~--~~~~l~~~~~yl~~~-- 338 (476)
+|+ |||||+||+|...-.........+.+.+||+++++|||+++-..|+.+++++. +.+.+...+-||...
T Consensus 264 ~gl-----WLHVDAAYAGsa~iCpE~r~l~rGie~aDSfn~n~hK~~~vnfDCs~lWvkd~~~~~~~~~vdp~yL~h~~~ 338 (511)
T KOG0628|consen 264 EGL-----WLHVDAAYAGSAFICPEFRYLMRGIEYADSFNFNPHKWLLVNFDCSPLWVKDGTKLSRAFNVDPLYLKHAYQ 338 (511)
T ss_pred cCE-----EEEeehhhccccccCHHHHHHhhcchhhccccCChhheeEEeeeeecceeecCceeeeeeecChHhhcchhh
Confidence 999 99999999876554444444577888899999999999999999999999987 345556666666542
Q ss_pred -------CCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecC-CeeEEEEecCCcHHH
Q 011842 339 -------DATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNE-LSSTVVFERPQDEEF 410 (476)
Q Consensus 339 -------~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~-~~~iv~f~~~~~~~~ 410 (476)
.+.+.-+|+ +.++++|..++.+|.+++++++++..++++.|.+.+.+.+.+.+.++ ....|||+..++++.
T Consensus 339 ~~~~Dyrhwqipl~rR-fRSLKlWfv~R~~Gve~lq~~iR~h~~La~~fe~lv~~d~~FE~~~~~~lgLvcFRlk~~N~~ 417 (511)
T KOG0628|consen 339 GSAPDYRHWQIPLGRR-FRSLKLWFVLRSYGVENLQNYIREHVRLAKEFETLVRADPRFEIVNKRILGLVCFRLKGDNEI 417 (511)
T ss_pred ccCCCccccccccccc-hhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCcceeecccccceeEEeecCCcHH
Confidence 234556665 67999999999999999999999999999999999998776666554 568999997654433
Q ss_pred ----hhce------ee-cc---cCCEEEEEE-cCCCCHHHHHHHHHHHHHHHHHHHhc
Q 011842 411 ----VRRW------QL-AC---QGNIAHVVV-MPNVTIDKLDDFLNELIENRSTWYED 453 (476)
Q Consensus 411 ----~~~~------~l-~~---~~~~lRv~~-~~~~T~edid~~~~~l~~~~~~~~~~ 453 (476)
.+++ .+ ++ +.-.+|+++ ++.++.+||+.....|.+....+.+.
T Consensus 418 ne~Ll~~in~~g~i~l~~~~l~gk~vlRf~V~s~~t~~~di~~a~~~I~~~a~~l~~~ 475 (511)
T KOG0628|consen 418 NEALLNRLNSSGRIHLVPASLHGKFVLRFAVCSPLTNESDIDEAWKIIFEAADELFEA 475 (511)
T ss_pred HHHHHHHHHhcCcEEEEEeeecceEEEEEEecCCCCcHHHHHHHHHHHHHHHHHHHhh
Confidence 2222 22 21 234679765 78889999999999999999887654
No 13
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=100.00 E-value=7.3e-36 Score=301.45 Aligned_cols=307 Identities=24% Similarity=0.357 Sum_probs=246.8
Q ss_pred CCCCcCCcchHHHHHHHHHhhCCCCCCcccCccchhhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHh
Q 011842 101 GYPYNLDFDYGALAQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGRE 180 (476)
Q Consensus 101 g~p~~~~~~~~~l~~~l~~~~n~~g~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~ 180 (476)
|++.. ..+++.+.+++...+|++...+..++ +..++|+++++|+++++|++.++..+++|+|||+||++++++++.
T Consensus 4 ~~~~~-~~~~~~~~~~~~~~~n~~~~~y~~~~---~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~ 79 (345)
T cd06450 4 GFVTT-MDPPALLLEMLTSAKNAIDFTWDESP---AATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARD 79 (345)
T ss_pred cccCC-CcHHHHHHHHHHHhcCCCCcccccCc---hhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHH
Confidence 34444 33458899999999998877766555 678999999999999999973345699999999999999999875
Q ss_pred hC----------C--CcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccCHHHHHHHHHc---CCCCcEEEEEeeCCC
Q 011842 181 VF----------P--DGILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCADFKAKLLQ---NKDKPAIINVNIGTT 245 (476)
Q Consensus 181 ~~----------p--~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~~~Le~~l~~---~~~~p~~vv~t~gtt 245 (476)
+. + +.+|+++..+|+++.++++.+|++++.+|+++++.+|+++|++++.+ ...++.+|++++++|
T Consensus 80 ~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~ 159 (345)
T cd06450 80 RARKRLKAGGGRGIDKLVIVCSDQAHVSVEKAAAYLDVKVRLVPVDEDGRMDPEALEAAIDEDKAEGLNPIMVVATAGTT 159 (345)
T ss_pred HhhhhhhcccccccCCeEEEEcCcchhHHHHHHHHHhcCeEEeeeCCCCCcCHHHHHHHHHHHHHCCCCcEEEEEecccC
Confidence 31 2 45899999999999999999999999999988889999999999976 222456888899999
Q ss_pred ccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCcccccEEEEcCCCCCCCCCCceeEEeehhhh
Q 011842 246 VKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHI 325 (476)
Q Consensus 246 ~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~ 325 (476)
++|.++|+++|+++|++||+ |+|+|+||+++.++...+.........+|++++++|||+++|+++|+++++
T Consensus 160 ~tG~~~~~~~i~~~~~~~~~-----~l~vD~a~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~p~g~g~~~~~---- 230 (345)
T cd06450 160 DTGAIDPLEEIADLAEKYDL-----WLHVDAAYGGFLLPFPEPRHLDFGIERVDSISVDPHKYGLVPLGCSAVLVR---- 230 (345)
T ss_pred CCCCCCCHHHHHHHHHHhCC-----eEEEechhhHHHhhChhhHHHhcCccccCEEEEchhHhhCCCcchHHHHHH----
Confidence 99999999999999999999 999999999877654322211111235899999999999999999998765
Q ss_pred hhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCCeEe-ecCCeeEEEEec
Q 011842 326 NVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAM-LNELSSTVVFER 404 (476)
Q Consensus 326 ~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~-~~~~~~iv~f~~ 404 (476)
.+++|++++.++..++++++++..++++++.+.|++.+...+ .++..++++|..
T Consensus 231 -------------------------~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~iv~f~~ 285 (345)
T cd06450 231 -------------------------ALKLWATLRRFGRDGYGEHIDRIVDLAKYLAELIRADPGFELLGEPNLSLVCFRL 285 (345)
T ss_pred -------------------------HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceeEEEEEE
Confidence 578899999999999999999999999999999999754443 345678999987
Q ss_pred CCc-------HHHh----h--ceeecc----cCCEEEEEEcCC-CCHHHHHHHHHHHHH
Q 011842 405 PQD-------EEFV----R--RWQLAC----QGNIAHVVVMPN-VTIDKLDDFLNELIE 445 (476)
Q Consensus 405 ~~~-------~~~~----~--~~~l~~----~~~~lRv~~~~~-~T~edid~~~~~l~~ 445 (476)
++. .++. + .+.++. ....+|++++.. +|++|||+|+++|++
T Consensus 286 ~~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 286 KPSVKLDELNYDLSDRLNERGGWHVPATTLGGPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred CCcchhhHHHHHHHHHHHhcCCEEEEeeEECCeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 642 1221 2 122221 246899999865 599999999999975
No 14
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=100.00 E-value=1.3e-34 Score=295.14 Aligned_cols=353 Identities=25% Similarity=0.420 Sum_probs=266.9
Q ss_pred cHHHHHHHHHHHHhccccc--ccCCCCcCCcc-hHHHHHHHHHhhCCCCCCcccCccchhhHHHHHHHHHHHHHHcCCCC
Q 011842 80 YMAGVLARYRKTLMERTKH--HLGYPYNLDFD-YGALAQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELEN 156 (476)
Q Consensus 80 ~~~~il~~~~~~~~~~~~~--~~g~p~~~~~~-~~~l~~~l~~~~n~~g~~~~~~~~~~~~~~le~~~~~~la~l~g~~~ 156 (476)
+.+++++.+++........ .+|.- ...+ +.....+..+...+.+.+... .+..++++++++++++++|++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~a~~~~~~~~~~~~~~~----~~~~~~~~~~~~~la~~~g~~~ 76 (371)
T PRK13520 3 SEEEILEELEEYRSEDLKYERILSSM--CTEPHPIARKAHEMFLETNLGDPGLF----PGTAKLEEEAVEMLGELLHLPD 76 (371)
T ss_pred CHHHHHHHHHHHHhcCCCHHHeeeee--ecCchHHHHHHHHHHHhcCCCCcccC----ccHHHHHHHHHHHHHHHhCCCC
Confidence 4678888888877665431 12210 1111 233333333333343433211 1456888999999999999875
Q ss_pred CcccEEEcCCchhHHHHHHHHHHhh--CCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccCHHHHHHHHHcCCCC
Q 011842 157 NEYWGYITNCGTEGNLHGILVGREV--FPDGILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCADFKAKLLQNKDK 234 (476)
Q Consensus 157 ~~~~g~~t~ggt~An~~al~aa~~~--~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~~~Le~~l~~~~~~ 234 (476)
+ .+++|+|||++|..++.+++.. .+++.|++++.+|+++.++++.+|++++.+|.++++.+|+++|+++|.+++.
T Consensus 77 ~--~~~~~~ggt~a~~~a~~~~~~~~~~~~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~- 153 (371)
T PRK13520 77 A--YGYITSGGTEANIQAVRAARNLAKAEKPNIVVPESAHFSFDKAADMLGVELRRAPLDDDYRVDVKAVEDLIDDNTI- 153 (371)
T ss_pred C--CeEEecCcHHHHHHHHHHHHhhccCCCceEEecCcchHHHHHHHHHcCceEEEecCCCCCcCCHHHHHHHHhhCCE-
Confidence 3 4899999999999998887663 2578999999999999999999999999999988889999999999986643
Q ss_pred cEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCc-ccccEEEEcCCCCCCCCC
Q 011842 235 PAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFK-KPIGSVSVSGHKFVGCPM 313 (476)
Q Consensus 235 p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~-~~~Dsi~~s~hK~l~~p~ 313 (476)
.|++++++|++|.+.|+++|.++|++||+ ++|+|++|+++..+.......++.. ..+|++++++|||+++|.
T Consensus 154 --~vi~~~~~~~tG~~~~l~~I~~l~~~~g~-----~livD~a~~~~~~~~~~~~~~~~~~~~~vd~~~~s~~K~~~a~~ 226 (371)
T PRK13520 154 --GIVGIAGTTELGQVDPIPELSKIALENGI-----FLHVDAAFGGFVIPFLDDPPNFDFSLPGVDSITIDPHKMGLAPI 226 (371)
T ss_pred --EEEEEcCCcCCcccCCHHHHHHHHHHcCC-----CEEEEecchhHHHHhhcCCCCccccCCCCceEEECCccccCccC
Confidence 56677889999999999999999999999 9999999998776544432224433 358999999999999999
Q ss_pred CceeEEeehh-hhhhhcCCccccCCC-CCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCCeE
Q 011842 314 PCGVQITRME-HINVLSSNVEYLASR-DATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISA 391 (476)
Q Consensus 314 ~~G~l~~~~~-~~~~l~~~~~yl~~~-~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~ 391 (476)
++|+++++++ +++.+.....|+... .....|++++...+++|++++.++.+++++++++..+++++|.+.|++.|+..
T Consensus 227 ~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gt~~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~ 306 (371)
T PRK13520 227 PAGGILFRDESYLDALAVDTPYLTSKKQATLTGTRSGAGVAATYAVMKYLGREGYRKVVERCMENTRWLAEELKERGFEP 306 (371)
T ss_pred CceEEEEcCHHHHHhhcccCccccCCCCcceEeeccChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHHHHHHHHhCCCEE
Confidence 9999888665 566554344555432 22346788777788899999999888999999999999999999999988764
Q ss_pred eecCCeeEEEEecCCcHHHh-----hceeec-cc-CCEEEEEEcCCCCHHHHHHHHHHHHHHHH
Q 011842 392 MLNELSSTVVFERPQDEEFV-----RRWQLA-CQ-GNIAHVVVMPNVTIDKLDDFLNELIENRS 448 (476)
Q Consensus 392 ~~~~~~~iv~f~~~~~~~~~-----~~~~l~-~~-~~~lRv~~~~~~T~edid~~~~~l~~~~~ 448 (476)
+.++..++++|..++..++. +++.+. +. ...+|+++++++|++||++|+++|+++.+
T Consensus 307 ~~~~~~~~v~~~~~~~~~v~~~L~~~gi~v~~~~~~~~iRis~~~~~t~edi~~~~~~l~~~~~ 370 (371)
T PRK13520 307 VIEPVLNIVAFDDPNPDEVREKLRERGWRVSVTRCPEALRIVCMPHVTREHIENFLEDLKEVKK 370 (371)
T ss_pred ecCCCceEEEEecCCHHHHHHHHHHCCceeccCCCCCEEEEEEECCCCHHHHHHHHHHHHHHhh
Confidence 55666788888876544332 233343 22 46799999999999999999999988654
No 15
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=100.00 E-value=2e-33 Score=277.22 Aligned_cols=320 Identities=16% Similarity=0.166 Sum_probs=247.1
Q ss_pred hHHHHHHHHHhhCCCCCCcccCccchhhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhh----CCCc
Q 011842 110 YGALAQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREV----FPDG 185 (476)
Q Consensus 110 ~~~l~~~l~~~~n~~g~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~----~p~~ 185 (476)
+..+..++.+....+|++...+.+|..+.++-++.++.+++++|+++ ..++||+||||+|++++..+... ..+.
T Consensus 15 ~~v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~llga~~--~eIiFTSG~TEsnNlaI~g~~~a~~~~~~~~ 92 (386)
T COG1104 15 PEVLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLLGADP--EEIIFTSGATESNNLAIKGAALAYRNAQKGK 92 (386)
T ss_pred HHHHHHHHHHHHhhcCCccchhHhHHHHHHHHHHHHHHHHHHhCCCC--CeEEEecCCcHHHHHHHHhhHHhhhcccCCC
Confidence 46666666666666777776777788889999999999999999987 45999999999999999874322 2467
Q ss_pred EEEecCCCchHHHHHHHHc---CCeEEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHH
Q 011842 186 ILYASRESHYSVFKAARMY---RMECVKVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEE 262 (476)
Q Consensus 186 ~Vl~s~~~H~S~~~~~~~~---G~~v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~ 262 (476)
.||++..+|.++...++.+ |.++.++|++.+|.+|+++|+++|+++|. +|.+-+.+|.+|+++||++|+++|++
T Consensus 93 HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V~~~G~v~~e~L~~al~~~T~---LVSim~aNnE~G~IQpI~ei~~i~k~ 169 (386)
T COG1104 93 HIITSAIEHPAVLNTCRYLERQGFEVTYLPVDSNGLVDLEQLEEALRPDTI---LVSIMHANNETGTIQPIAEIGEICKE 169 (386)
T ss_pred eEEEcccccHHHHHHHHHHHhcCCeEEEeCCCCCCeEcHHHHHHhcCCCce---EEEEEecccCeeecccHHHHHHHHHH
Confidence 9999999999999999999 99999999999999999999999998874 89999999999999999999999999
Q ss_pred hCCCCCceEEEEecCcccccccccccCCCCCCcc-cccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCC-C
Q 011842 263 SGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRD-A 340 (476)
Q Consensus 263 ~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~-~ 340 (476)
+++ ++|+|++|+.+.+| ++..+ .+|++++|+||+.| |.|+|++++|+... ..+...++.. .
T Consensus 170 ~~i-----~fHvDAvQa~Gkip-------i~~~~~~vD~ls~SaHK~~G-pkGiGaLyv~~~~~----~~p~i~GGgQE~ 232 (386)
T COG1104 170 RGI-----LFHVDAVQAVGKIP-------IDLEELGVDLLSFSAHKFGG-PKGIGALYVRPGVR----LEPLIHGGGQER 232 (386)
T ss_pred cCC-----eEEEehhhhcCcee-------ccccccCcceEEeehhhccC-CCceEEEEECCCCc----cCceeccCcCCC
Confidence 999 99999999988887 66666 49999999999998 99999999976531 1112222211 1
Q ss_pred cc-cCCCCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhc-CCeEeecC----CeeEEEEecCC--cHHHhh
Q 011842 341 TI-MGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDA-GISAMLNE----LSSTVVFERPQ--DEEFVR 412 (476)
Q Consensus 341 ~~-~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~-g~~~~~~~----~~~iv~f~~~~--~~~~~~ 412 (476)
.. .||-+.....++..+++. ..+.+.....+...++++|.+.|.+. +...+... ..+++.|..|. .+.+..
T Consensus 233 g~RsGTenv~~Ivg~~~A~~~-a~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~rlP~~~~~~f~gv~gE~ll~ 311 (386)
T COG1104 233 GLRSGTENVPGIVGFGKAAEI-AVEELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPRLPNILNFSFPGVEGESLLL 311 (386)
T ss_pred CCCCCCccHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcccCCCCeEEEEeCCCcHHHHHH
Confidence 11 233333333334444433 24667788889999999999999986 54444322 24666676653 333322
Q ss_pred -----ceeec----cc--------------------CCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHh
Q 011842 413 -----RWQLA----CQ--------------------GNIAHVVVMPNVTIDKLDDFLNELIENRSTWYE 452 (476)
Q Consensus 413 -----~~~l~----~~--------------------~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~~ 452 (476)
++.++ |. ...+|+++...+|++|||+++++|+++.+++.+
T Consensus 312 ~L~~~gI~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~~~~~~l~~~i~~lr~ 380 (386)
T COG1104 312 ALDLAGIAVSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLGRFTTEEEIDAAAEALKEIIKRLRE 380 (386)
T ss_pred hccccCeEEeccccccCCCCCccHHHHHcCCChHHhCccEEEEcCCCCCHHHHHHHHHHHHHHHHHHhh
Confidence 22221 11 267999999999999999999999999988764
No 16
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=100.00 E-value=4.7e-33 Score=284.07 Aligned_cols=350 Identities=27% Similarity=0.425 Sum_probs=259.1
Q ss_pred HHHHHHHHHHHHhcccccccCCCCcCC----cchHH-HHHHHHHhhCCCCCCcccCccchhhHHHHHHHHHHHHHHcCCC
Q 011842 81 MAGVLARYRKTLMERTKHHLGYPYNLD----FDYGA-LAQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELE 155 (476)
Q Consensus 81 ~~~il~~~~~~~~~~~~~~~g~p~~~~----~~~~~-l~~~l~~~~n~~g~~~~~~~~~~~~~~le~~~~~~la~l~g~~ 155 (476)
-+++++++.++...+.+. +.++... .+... ...+..+...+.+.... .+ +..++++++++++++++|++
T Consensus 2 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~la~~~g~~ 75 (373)
T TIGR03812 2 EEEVLEELKEYRSEDLKY--SDGRILGSMCTNPHPIAVKAYDMFIETNLGDPGL-FP---GTKKIEEEVVGSLGNLLHLP 75 (373)
T ss_pred HHHHHHHHHHHHhcCCCC--CCCcEEEEEeCCchHHHHHHHHHHhhcCCCCccc-Cc---cHHHHHHHHHHHHHHHhCCC
Confidence 367888888865554442 2233111 11222 23333332233333221 11 45688899999999999997
Q ss_pred CCcccEEEcCCchhHHHHHHHHHHhh----CCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccCHHHHHHHHHcC
Q 011842 156 NNEYWGYITNCGTEGNLHGILVGREV----FPDGILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCADFKAKLLQN 231 (476)
Q Consensus 156 ~~~~~g~~t~ggt~An~~al~aa~~~----~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~~~Le~~l~~~ 231 (476)
++ .+++++|++++++.++.+++.. .+++.|++++.+|+++.++++..|++++.+++++++.+|+++|+++++++
T Consensus 76 ~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~vl~~~~~h~~~~~~~~~~G~~~~~v~~~~~~~~d~~~l~~~l~~~ 153 (373)
T TIGR03812 76 DA--YGYIVSGGTEANIQAVRAAKNLAREEKRTPNIIVPESAHFSFEKAAEMLGLELRYAPLDEDYTVDVKDVEDLIDDN 153 (373)
T ss_pred CC--CeEEeccHHHHHHHHHHHHHHHHhccCCCcEEEECCcchHHHHHHHHHcCCeEEEEeeCCCCCcCHHHHHHHHhhC
Confidence 53 3889999999999888776532 25689999999999999999999999999999888999999999999876
Q ss_pred CCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccc---cCCCCCCcc-cccEEEEcCCC
Q 011842 232 KDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVK---KAPKVSFKK-PIGSVSVSGHK 307 (476)
Q Consensus 232 ~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~---~~~~~~~~~-~~Dsi~~s~hK 307 (476)
+ ..+++..++|++|.++|+++|.++|+++|+ |+|+|+||+++..+... ....+++.. .+|++++++||
T Consensus 154 ~---~~vv~~~~~~~tG~~~~~~~i~~l~~~~~~-----~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K 225 (373)
T TIGR03812 154 T---IGIVGIAGTTELGQIDDIEELSKIALENGI-----YLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGVQSITIDPHK 225 (373)
T ss_pred c---EEEEEECCCCCCCccCCHHHHHHHHHHcCC-----eEEEEcCchhHHHHHHhcCCCCCCccccCCCCCEEEECccc
Confidence 5 234444588999999999999999999999 99999999877654321 112244433 48999999999
Q ss_pred CCCCCCCceeEEee-hhhhhhhcCCccccCCC-CCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHH
Q 011842 308 FVGCPMPCGVQITR-MEHINVLSSNVEYLASR-DATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLL 385 (476)
Q Consensus 308 ~l~~p~~~G~l~~~-~~~~~~l~~~~~yl~~~-~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~ 385 (476)
|+.+|.++|+++++ +++++.+.....|+... .....|+++....++++++++.++.+++++..++..+++++|++.|+
T Consensus 226 ~~~~~~~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~ 305 (373)
T TIGR03812 226 MGLSPIPAGGILFRSKSYLKYLSVDAPYLTVKKQATITGTRSGASAAATYAVIKYLGREGYRKIVAECMENTRYLVEELK 305 (373)
T ss_pred cCCCcCCceEEEEeCHHHHhhhcccCcccCCCCCcceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99889999877764 45666554444565432 23345788777788899999999889999999999999999999999
Q ss_pred hcCCeEeecCCeeEEEEecCCcHHHh-----hceeecc--cCCEEEEEEcCCCCHHHHHHHHHHHHHH
Q 011842 386 DAGISAMLNELSSTVVFERPQDEEFV-----RRWQLAC--QGNIAHVVVMPNVTIDKLDDFLNELIEN 446 (476)
Q Consensus 386 ~~g~~~~~~~~~~iv~f~~~~~~~~~-----~~~~l~~--~~~~lRv~~~~~~T~edid~~~~~l~~~ 446 (476)
+.|+..+.++.+++++|..++..++. +++.+.. ....+|++++.++|++|+|+|+++|+++
T Consensus 306 ~~g~~~~~~~~~~~v~~~~~~~~~v~~~L~~~gi~v~~~~~~~~iRis~~~~~t~edid~l~~~L~~~ 373 (373)
T TIGR03812 306 KIGFEPVIEPVLNIVAFEVDDPEEVRKKLRDRGWYVSVTRCPKALRIVVMPHVTREHIEEFLEDLKEI 373 (373)
T ss_pred hCCCeEEcCCCceEEEEEeCCHHHHHHHHHHCCceeccCCCCCEEEEEEECCCCHHHHHHHHHHHhhC
Confidence 99876666677888888876543333 2344432 3468999999999999999999999763
No 17
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.8e-33 Score=284.61 Aligned_cols=299 Identities=16% Similarity=0.125 Sum_probs=241.1
Q ss_pred chhhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHh-hCCCcEEEecCCCchH----HHHHHHHcCCeE
Q 011842 134 GVHSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGRE-VFPDGILYASRESHYS----VFKAARMYRMEC 208 (476)
Q Consensus 134 ~~~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~-~~p~~~Vl~s~~~H~S----~~~~~~~~G~~v 208 (476)
+...++.++++++.+++++|.++ ...++||.|.|+|+.....+... ..+||+|+++..+|.| |...++..|+++
T Consensus 61 ~~~~t~~~e~aRe~va~~~~a~~-~~eIvft~~tT~aln~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v 139 (405)
T COG0520 61 AEEATDLYEAAREAVARFLNADS-SDEIVFTRGTTEALNLVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTGAKV 139 (405)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCC-CCeEEEeCChhHHHHHHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhcCcEE
Confidence 33567899999999999999985 34599999999998877766532 3488999999999987 567777779999
Q ss_pred EEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCccccccccccc
Q 011842 209 VKVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKK 288 (476)
Q Consensus 209 ~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~ 288 (476)
+.+|.+++|.+|.++++..+.++|+ +|++++.+|.+|.+.|+++|+++||++|+ |++||++|+.+.+|
T Consensus 140 ~~i~~~~~g~~~~~~~~~~i~~~Tk---lvais~vSn~tG~~~pv~~I~~la~~~ga-----~v~VDaaq~~~h~~---- 207 (405)
T COG0520 140 RVIPLDDDGLLDLDALEKLITPKTK---LVALSHVSNVTGTVNPVKEIAELAHEHGA-----LVLVDAAQAAGHLP---- 207 (405)
T ss_pred EEEecCCCCCcCHHHHHHhcCCCce---EEEEECccccccccchHHHHHHHHHHcCC-----EEEEECccccCccC----
Confidence 9999998999999999999888887 99999999999999999999999999999 99999999998887
Q ss_pred CCCCCCccc-ccEEEEcCCCCCCCCCCceeEEeehhhhhhhcC------CccccCC---------CCCcccCCCCChhHH
Q 011842 289 APKVSFKKP-IGSVSVSGHKFVGCPMPCGVQITRMEHINVLSS------NVEYLAS---------RDATIMGSRNGHAPI 352 (476)
Q Consensus 289 ~~~~~~~~~-~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~------~~~yl~~---------~~~~~~~sr~~~~~l 352 (476)
+++.+. +|++.+|+|||+++|.|+|+|++|+++++.+.. ...+... ......|+.+....+
T Consensus 208 ---idv~~l~~Df~afsgHKwl~gP~GiGvLy~r~~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i 284 (405)
T COG0520 208 ---IDVQELGCDFLAFSGHKWLLGPTGIGVLYVRKELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAI 284 (405)
T ss_pred ---CCchhcCCCEEEEcccccccCCCceEEEEEchHHHhhcCCcccCCCceeeecccccccccCcchhhccCCchHHHHH
Confidence 777664 999999999999999999999999998776621 0111111 011234666666678
Q ss_pred HHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCCeEee-cC---CeeEEEEecCC--cHHHh-----hceeec----
Q 011842 353 FLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAML-NE---LSSTVVFERPQ--DEEFV-----RRWQLA---- 417 (476)
Q Consensus 353 ~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~-~~---~~~iv~f~~~~--~~~~~-----~~~~l~---- 417 (476)
.+.++++++...|++++.++.+++++++.++|++.+...+. ++ ...+++|..+. +.++. ++..+.
T Consensus 285 ~l~aAl~~~~~ig~~~i~~~e~~L~~~~~~~L~~~~~v~i~g~~~~~r~~~vsF~v~~~~~~dv~~~L~~~gI~vr~g~~ 364 (405)
T COG0520 285 GLAAALDYLLEIGMEAIEAHERELTEYLLEGLSELPGVEIYGPPDADRGGIVSFNVKGIHPHDVATLLDEKGIAVRAGHH 364 (405)
T ss_pred hHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCcccCceEEEEEeCCCCHHHHHHHHHhCCeEEEeccc
Confidence 88899999988899999999999999999999998755544 33 36889998764 23222 122221
Q ss_pred cc---------CCEEEEEEcCCCCHHHHHHHHHHHHHHHH
Q 011842 418 CQ---------GNIAHVVVMPNVTIDKLDDFLNELIENRS 448 (476)
Q Consensus 418 ~~---------~~~lRv~~~~~~T~edid~~~~~l~~~~~ 448 (476)
|. ...+|+|++.++|+||||+|+++|+++.+
T Consensus 365 ca~p~~~~~~~~~~iR~S~~~YNt~edid~l~~aL~~~~~ 404 (405)
T COG0520 365 CAQPLHRLLGVDATIRASLHLYNTEEDVDRLLEALKKALA 404 (405)
T ss_pred cccHHHHhcCCCCceEEEEeecCCHHHHHHHHHHHHHHhh
Confidence 21 13399999999999999999999998754
No 18
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=100.00 E-value=6e-31 Score=259.24 Aligned_cols=375 Identities=19% Similarity=0.232 Sum_probs=290.4
Q ss_pred cccCCCCCcHHHHHHHHHHHHhcccccccCCCCcCCc--chHHHHHHHHHhhCCCCCCcccCccchhhHHHHHHHHHHHH
Q 011842 72 EFTGDKEAYMAGVLARYRKTLMERTKHHLGYPYNLDF--DYGALAQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFA 149 (476)
Q Consensus 72 ~~~~~~~~~~~~il~~~~~~~~~~~~~~~g~p~~~~~--~~~~l~~~l~~~~n~~g~~~~~~~~~~~~~~le~~~~~~la 149 (476)
..+|++|.+.+++++.+.+.+....+..+| +..... -......++...+|.. +.....-++ ..++++.++.++++
T Consensus 54 ~~lP~~gl~~d~v~~~i~~~~~ld~~~~~~-~vS~~v~~~~~~~~~l~~~~~~k~-N~l~~d~fp-~~~~~e~~~Vnm~~ 130 (491)
T KOG1383|consen 54 FTLPSKGLPKDAVLELINDELMLDGNPRLG-LASGVVYWGEPELDKLIMEAYNKF-NPLHPDEFP-VVRKLEAECVNMIA 130 (491)
T ss_pred ecCCCCCCCHHHHHHHHHHHhccCCCcccC-eeeEEEecCCcchhhHHHHHHhhc-CccCccccc-hhHHHHHHHHHHHH
Confidence 378999999999999998887655432222 111110 0233444554444422 111112222 57899999999999
Q ss_pred HHcCCCCCcccEEEcCCchhHHHHHHHHHHhhC------CCcEEEecCCCchHHHHHHHHcCCeEEEEeCC-CCCccCHH
Q 011842 150 RLWELENNEYWGYITNCGTEGNLHGILVGREVF------PDGILYASRESHYSVFKAARMYRMECVKVDCL-ISGEIDCA 222 (476)
Q Consensus 150 ~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~------p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~-~~g~~D~~ 222 (476)
.|++.+.+ ..|..|+|||+|.+.+....+++. ..+.++++...|.++.++++.++++++.||++ .+.++|+.
T Consensus 131 ~L~~~~~~-~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a~eK~a~yf~v~l~~V~~~~~~~~~D~~ 209 (491)
T KOG1383|consen 131 NLFNAPSD-SCGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAAFEKAARYFEVELREVPLDEGDYRVDPG 209 (491)
T ss_pred HHhcCCcc-ccCccccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHHHHHHHHhhEEEEEEeeeccccceEecHH
Confidence 99999954 678899999999888777765531 24678999999999999999999999999998 57899999
Q ss_pred HHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHH-hCCCCCceEEEEecCccccccc-ccccCCCCCCccc-cc
Q 011842 223 DFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEE-SGFTQDRFYIHCDGALFGLMMP-FVKKAPKVSFKKP-IG 299 (476)
Q Consensus 223 ~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~-~g~~~~~~~lhvD~a~~g~~~~-~~~~~~~~~~~~~-~D 299 (476)
.+.+.+.+++. .++...|++++|.++|+++|.++.-+ +++ .+|||++.|+++.| +......+++... +-
T Consensus 210 k~~~~i~eNti---~lv~~~~~~p~G~~e~ve~l~~l~~e~w~i-----piHvDa~~GgFi~p~~~~~~~~fdFr~p~V~ 281 (491)
T KOG1383|consen 210 KVVRMIDENTI---MLVGSLPNFPTGEIEDVEKLADLLLEIWDI-----PIHVDACLGGFINPAGYLNEEEFDFRVPGVT 281 (491)
T ss_pred HHHHHhccceE---EEEEEcCCCCccchhhHHHHHHHHHHHhCC-----ceeecccCccccccccccCccccccCCCCce
Confidence 99999999985 88899999999999999999999999 999 99999999999998 3333446888765 99
Q ss_pred EEEEcCCCCCCCCCCceeEEeehh--hhhhhcCCccccCCC--CCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHHH
Q 011842 300 SVSVSGHKFVGCPMPCGVQITRME--HINVLSSNVEYLASR--DATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLR 375 (476)
Q Consensus 300 si~~s~hK~l~~p~~~G~l~~~~~--~~~~l~~~~~yl~~~--~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~ 375 (476)
|++.+.||+..+|.|+|+++.|++ +...+.....|+++- ..|+.|||++...+.+|+++-.+|.+||.+..+++.+
T Consensus 282 Sisa~~HKYGl~~~G~~~vl~r~k~~~~~q~~~~~~w~Gg~y~s~TlngSR~g~~va~~wa~~~~lG~eGY~~~~~~ive 361 (491)
T KOG1383|consen 282 SISADGHKYGLAPAGSSWVLYRNKELLPHQLFFHTDWLGGIYASPTLNGSRPGSQVAAQWAALMSLGEEGYRENTQNIVE 361 (491)
T ss_pred eEeeccceeeeeecCcEEEEEcccccccceEEEeccccCccccCcccccCCcccHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 999999999999999999999987 335566777888763 4678999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcC-CeEeecCCeeEEEEecCCcH-----HH--hhceeeccc--CCEEEEEEcCCCCHHH-HHHHHHHHH
Q 011842 376 NAHYLKDRLLDAG-ISAMLNELSSTVVFERPQDE-----EF--VRRWQLACQ--GNIAHVVVMPNVTIDK-LDDFLNELI 444 (476)
Q Consensus 376 ~a~~l~~~L~~~g-~~~~~~~~~~iv~f~~~~~~-----~~--~~~~~l~~~--~~~lRv~~~~~~T~ed-id~~~~~l~ 444 (476)
.++.|++.|++.+ +..+.+|...++.|....-+ +. ..+|.++.- ...+++++...++.++ .|+|+.+|+
T Consensus 362 ~~~~l~egie~i~~i~i~gkp~vs~~~~~s~~~~i~elsd~l~~~GW~lnalq~P~a~Hi~vt~~~~~~~~A~~~v~Di~ 441 (491)
T KOG1383|consen 362 TARKLREGIENIKGIKIVGKPLVSFILFGSNDVNIFELSDLLRKKGWILNALQFPAAIHICVTRVHAREDVADRFVADIR 441 (491)
T ss_pred HHHHHHHhhhccccceecCCCcEEEEEccCCccchhhhhHHHHhcCcCccccCCCCceEEEEEeeeccHHHHHHHHHHHH
Confidence 9999999999964 45555666666666433211 12 246777532 3467777655555444 699999999
Q ss_pred HHHHHHHhcCCCCC
Q 011842 445 ENRSTWYEDGKRQP 458 (476)
Q Consensus 445 ~~~~~~~~~~~~~~ 458 (476)
++..++...+..++
T Consensus 442 ~~~~el~~~p~~~~ 455 (491)
T KOG1383|consen 442 KVVEELKSLPESKT 455 (491)
T ss_pred HHHHHHHhCCCccc
Confidence 99999987665444
No 19
>PLN02651 cysteine desulfurase
Probab=99.97 E-value=2e-29 Score=256.73 Aligned_cols=281 Identities=16% Similarity=0.093 Sum_probs=214.2
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhh--CCCcEEEecCCCchHHHHHHH---HcCCeEEE
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREV--FPDGILYASRESHYSVFKAAR---MYRMECVK 210 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~--~p~~~Vl~s~~~H~S~~~~~~---~~G~~v~~ 210 (476)
...++.+++++.+++++|.+++ .+++|+|+|+++++++..+... .+++.|+++..+|+|+..... ..|++++.
T Consensus 40 ~~~~~~~~~r~~la~~~g~~~~--~v~~t~~~t~a~~~~l~~~~~~~~~~g~~vl~~~~~h~s~~~~~~~~~~~g~~v~~ 117 (364)
T PLN02651 40 ESEDAVEKARAQVAALIGADPK--EIIFTSGATESNNLAIKGVMHFYKDKKKHVITTQTEHKCVLDSCRHLQQEGFEVTY 117 (364)
T ss_pred HHHHHHHHHHHHHHHHhCCCCC--eEEEeCCHHHHHHHHHHHHHHhccCCCCEEEEcccccHHHHHHHHHHHhcCCEEEE
Confidence 3457778889999999999754 4899999999999988776432 478899999999998755443 45889999
Q ss_pred EeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCC
Q 011842 211 VDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAP 290 (476)
Q Consensus 211 v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~ 290 (476)
++.++++.+|+++|+++|+++++ +|+++++++++|.+.|+++|+++|++||+ ++|||++|+.+..+
T Consensus 118 v~~~~~~~~d~~~l~~~i~~~t~---lv~v~~~~n~tG~~~~l~~I~~~~~~~g~-----~~~vD~a~~~g~~~------ 183 (364)
T PLN02651 118 LPVKSDGLVDLDELAAAIRPDTA---LVSVMAVNNEIGVIQPVEEIGELCREKKV-----LFHTDAAQAVGKIP------ 183 (364)
T ss_pred EccCCCCcCCHHHHHHhcCCCcE---EEEEECCCCCceecccHHHHHHHHHHcCC-----EEEEEcchhhCCcc------
Confidence 99988899999999999987664 88899999999999999999999999999 99999999987776
Q ss_pred CCCCcc-cccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCC--CCCcccCCCCChhHHHHHHHHHHhChhcHH
Q 011842 291 KVSFKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLAS--RDATIMGSRNGHAPIFLWYTLNRKGYKGFQ 367 (476)
Q Consensus 291 ~~~~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~--~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~ 367 (476)
+++.+ .+|++++++||| ++|.|+|+++++++....+... +... ......|+.+....+++.++++.+.. +.+
T Consensus 184 -~~~~~~~~D~~~~s~hK~-~gp~G~g~l~v~~~~~~~l~p~--~~g~~~~~~~~~GT~~~~~~~~l~~al~~~~~-~~~ 258 (364)
T PLN02651 184 -VDVDDLGVDLMSISGHKI-YGPKGVGALYVRRRPRVRLEPL--MSGGGQERGRRSGTENTPLVVGLGAACELAMK-EMD 258 (364)
T ss_pred -cCcccCCCCEEEechhhh-CCCCceEEEEEcCCCCCCCCcc--ccCCCccCCccCCCccHHHHHHHHHHHHHHHH-hHH
Confidence 45544 389999999998 5699999999998765443211 1111 11123567766666777788887753 458
Q ss_pred HHHHHHHHHHHHHHHHHHh-c-CCeEeec--CC---eeEEEEecCC--cHHHhhc---eeec----c-------------
Q 011842 368 KEVQKCLRNAHYLKDRLLD-A-GISAMLN--EL---SSTVVFERPQ--DEEFVRR---WQLA----C------------- 418 (476)
Q Consensus 368 ~~~~~~~~~a~~l~~~L~~-~-g~~~~~~--~~---~~iv~f~~~~--~~~~~~~---~~l~----~------------- 418 (476)
++.++..++++++.+.|++ . ++..+.+ +. .+++.|..++ ..++.+. +.+. |
T Consensus 259 ~i~~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~~~~~~i~~~~~~~~~~~~~~~~L~~i~v~~g~~c~~~~~~~~~~~~~ 338 (364)
T PLN02651 259 YDEKHMKALRERLLNGLRAKLGGVRVNGPRDPEKRYPGTLNLSFAYVEGESLLMGLKEVAVSSGSACTSASLEPSYVLRA 338 (364)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCEEEECCCCcccCcCCEEEEEeCCCCHHHHHHHhCCEEEEchhhcCCCCCCcCHHHHH
Confidence 8889999999999999986 3 5544433 11 3588887663 2333322 2221 1
Q ss_pred -------cCCEEEEEEcCCCCHHHHH
Q 011842 419 -------QGNIAHVVVMPNVTIDKLD 437 (476)
Q Consensus 419 -------~~~~lRv~~~~~~T~edid 437 (476)
..+.+|+|+++++|++|||
T Consensus 339 ~g~~~~~~~~~vR~S~~~~~t~~did 364 (364)
T PLN02651 339 LGVPEEMAHGSLRLGVGRFTTEEEVD 364 (364)
T ss_pred cCCChHHhCceEEEEcCCCCCHHHcC
Confidence 1368999999999999986
No 20
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.97 E-value=1.8e-28 Score=252.60 Aligned_cols=296 Identities=17% Similarity=0.116 Sum_probs=225.0
Q ss_pred hHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHh--hCCCcEEEecCCCchH----HHHHHHHcCCeEEE
Q 011842 137 SRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGRE--VFPDGILYASRESHYS----VFKAARMYRMECVK 210 (476)
Q Consensus 137 ~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~--~~p~~~Vl~s~~~H~S----~~~~~~~~G~~v~~ 210 (476)
..+...++++.+++++|.+. ...+++|+|+|+++..++.+... ..+++.|++++++|+| +...++..|++++.
T Consensus 58 ~~~~~~~~r~~la~~~g~~~-~~~i~~t~g~t~~l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~ 136 (398)
T TIGR03392 58 LTARYELARQQVARFLNAPD-AENIVWTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVK 136 (398)
T ss_pred HHHHHHHHHHHHHHHhCCCC-CCeEEEeCChHHHHHHHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEE
Confidence 34667788899999999852 23589999999999988877631 2488999999999987 44567888999999
Q ss_pred EeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCC
Q 011842 211 VDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAP 290 (476)
Q Consensus 211 v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~ 290 (476)
+|+++++.+|+++|++++.++++ +|+++++++++|.+.|+++|+++|++||+ ++++|++|+.+..+
T Consensus 137 v~~~~~~~~~~~~l~~~i~~~t~---lv~i~~~~n~tG~~~~~~~i~~~~~~~~~-----~~ivD~a~~~~~~~------ 202 (398)
T TIGR03392 137 LPIGADLLPDIRQLPELLTPRTR---ILALGQMSNVTGGCPDLARAITLAHQYGA-----VVVVDGAQGVVHGP------ 202 (398)
T ss_pred EecCCCCCcCHHHHHHHhccCce---EEEEECccccccccCCHHHHHHHHHHcCC-----EEEEEhhhhcCCCC------
Confidence 99988888999999999977664 88889999999999999999999999999 99999999765544
Q ss_pred CCCCcc-cccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCcc------------ccCCCC-Ccc-cCCCCChhHHHHH
Q 011842 291 KVSFKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVE------------YLASRD-ATI-MGSRNGHAPIFLW 355 (476)
Q Consensus 291 ~~~~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~------------yl~~~~-~~~-~~sr~~~~~l~~~ 355 (476)
++... .+|++++|+||+++ |.|+|++++++++++.+..... |..... ..+ .|+.+....+++.
T Consensus 203 -~~~~~~~~d~~~~s~~K~~g-p~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~ 280 (398)
T TIGR03392 203 -PDVQALDIDFYAFSGHKLYG-PTGIGVLYGKTELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLS 280 (398)
T ss_pred -CChhhcCCCEEEEecccccC-CCceEEEEEcHHHHhhCCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHH
Confidence 23333 38999999999665 8899999999887665522110 000000 111 3566555667788
Q ss_pred HHHHHhChhcHHHHHHHHHHHHHHHHHHHHhc-CCeEeecCCeeEEEEecCC--cHHHh-----hceeec----cc----
Q 011842 356 YTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDA-GISAMLNELSSTVVFERPQ--DEEFV-----RRWQLA----CQ---- 419 (476)
Q Consensus 356 ~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~-g~~~~~~~~~~iv~f~~~~--~~~~~-----~~~~l~----~~---- 419 (476)
++++.+...|++++.++..++++++.+.|++. |+....++..+++.|..++ ..++. +++.+. |.
T Consensus 281 ~al~~l~~~g~~~i~~~~~~l~~~l~~~l~~l~g~~~~~~~~~~i~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~ 360 (398)
T TIGR03392 281 AALEWLTDIDIAAAEAWSVSLADLAEERLAQLPGFRSFRCPGSSLLAFDFAGVHHSDLAALLAESGIALRAGQHCAQPLM 360 (398)
T ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCCcEEEEEeCCcCHHHHHHHHHhCCEEEecCccchHHHH
Confidence 88888767788888899999999999999987 4443334556788877653 23332 233332 11
Q ss_pred -----CCEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Q 011842 420 -----GNIAHVVVMPNVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 420 -----~~~lRv~~~~~~T~edid~~~~~l~~~~~~ 449 (476)
.+.+|++++.++|++|||+|+++|+++.+.
T Consensus 361 ~~~g~~~~iRvS~~~~~t~~ei~~l~~~l~~~~~~ 395 (398)
T TIGR03392 361 AALGVSGTLRASFAPYNTQQDVDALVDAVGAALEL 395 (398)
T ss_pred HHhCCCCEEEEEeeccCCHHHHHHHHHHHHHHHHH
Confidence 368999999999999999999999988764
No 21
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.97 E-value=1.7e-28 Score=253.02 Aligned_cols=292 Identities=15% Similarity=0.136 Sum_probs=216.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHh--hCCCcEEEecCCCchHHHHHHH---HcCCeEEEEe
Q 011842 138 RQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGRE--VFPDGILYASRESHYSVFKAAR---MYRMECVKVD 212 (476)
Q Consensus 138 ~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~--~~p~~~Vl~s~~~H~S~~~~~~---~~G~~v~~v~ 212 (476)
.+..+++++.+++++|.+++ .+++|+|+|+++..++.++.. ..+++.|+++..+|.|+...++ ..|++++.++
T Consensus 46 ~~~~~~~r~~la~~~g~~~~--~v~~~~g~t~a~~~~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v~ 123 (402)
T TIGR02006 46 EEAVENARNQVAELIGADSR--EIVFTSGATESNNLAIKGIAHFYKSKGNHIITSKTEHKAVLDTCRYLEREGFEVTYLP 123 (402)
T ss_pred HHHHHHHHHHHHHHhCCCCC--eEEEeCCHHHHHHHHHHHHHHhhcCCCCEEEECCCccHHHHHHHHHHHhcCCEEEEEc
Confidence 45677888999999998754 499999999999988877642 2478999999999999876553 4599999999
Q ss_pred CCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCC
Q 011842 213 CLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKV 292 (476)
Q Consensus 213 ~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~ 292 (476)
+++++.+|+++|++++.++++ +|+++++++++|.+.|+++|.++|+++|+ ++|+|++|+.+..+ +
T Consensus 124 ~~~~~~~d~~~l~~~l~~~~~---lv~v~~~~n~tG~~~~~~~I~~l~~~~g~-----~livD~a~a~g~~~-------~ 188 (402)
T TIGR02006 124 PKSNGLIDLEELKAAIRDDTI---LVSIMHVNNEIGVIQDIAAIGEICRERKV-----FFHVDAAQSVGKIP-------I 188 (402)
T ss_pred cCCCCcCCHHHHHHhcCCCCE---EEEEECCCcCceecccHHHHHHHHHHcCC-----EEEEEcchhcCCcc-------c
Confidence 988899999999999976654 88889999999999999999999999999 99999999877665 3
Q ss_pred CCcc-cccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCC--CCcccCCCCChhHHHHHHHHHHhChhcHHHH
Q 011842 293 SFKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASR--DATIMGSRNGHAPIFLWYTLNRKGYKGFQKE 369 (476)
Q Consensus 293 ~~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~--~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~ 369 (476)
++.+ .+|++++++||+++ |.|+|+++++++....+.. .+.... .....++.+....+++..+++.+. ++++++
T Consensus 189 ~~~~~~~D~~~~s~~K~~g-p~G~G~l~~~~~~~~~~~~--~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~-~~~~~~ 264 (402)
T TIGR02006 189 NVNELKVDLMSISGHKIYG-PKGIGALYVRRKPRVRLEA--LIHGGGHERGMRSGTLPTHQIVGMGEAFRIAK-EEMAQD 264 (402)
T ss_pred CccccCCCEEEEehhhhcC-CCceEEEEEccCCCCCCCc--eecCCCccCCccCCCccHHHHHHHHHHHHHHH-HhHHHH
Confidence 4433 49999999999765 9999999999764332211 111100 011234554444455556666653 467888
Q ss_pred HHHHHHHHHHHHHHHHhcCCeEeec-C--C---eeEEEEecCCcHHHhh---ceeec----c------------------
Q 011842 370 VQKCLRNAHYLKDRLLDAGISAMLN-E--L---SSTVVFERPQDEEFVR---RWQLA----C------------------ 418 (476)
Q Consensus 370 ~~~~~~~a~~l~~~L~~~g~~~~~~-~--~---~~iv~f~~~~~~~~~~---~~~l~----~------------------ 418 (476)
.++..++++++.+.|++.+...+.. + . ..++.|...+.+.+.. +..+. |
T Consensus 265 ~~~~~~l~~~l~~~l~~~~~v~~~~~~~~~~p~~~~v~f~~~~~~~~~~~l~~i~v~~G~~c~~~~~~~~~~l~~lg~~~ 344 (402)
T TIGR02006 265 TAHVLALRDRLLNGIKSIEEVYLNGDLEHRVPGNLNVSFNYVEGESLIMALKDLAVSSGSACTSASLEPSYVLRALGIND 344 (402)
T ss_pred HHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCeEEEEEeCcCHHHHHHhcCCEEEechhhcCCCCCCccHHHHHcCCCh
Confidence 8999999999999998865433321 1 1 1246666323233322 22211 1
Q ss_pred --cCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 011842 419 --QGNIAHVVVMPNVTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 419 --~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~ 450 (476)
..+.+|+++++++|++|||+|+++|+++.+.+
T Consensus 345 ~~~~~~vR~S~~~~~t~edid~l~~~l~~~~~~~ 378 (402)
T TIGR02006 345 ELAHSSIRFTIGRFTTEEEIDYAVKLVKSAIDKL 378 (402)
T ss_pred hhcCceEEEEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 13689999999999999999999999988765
No 22
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.97 E-value=2.7e-28 Score=251.54 Aligned_cols=297 Identities=18% Similarity=0.128 Sum_probs=226.3
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHh--hCCCcEEEecCCCchH----HHHHHHHcCCeEE
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGRE--VFPDGILYASRESHYS----VFKAARMYRMECV 209 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~--~~p~~~Vl~s~~~H~S----~~~~~~~~G~~v~ 209 (476)
...+..+++++.+++++|.+. ...+++|+|+|+++..++.+... ..||+.|++++++|+| +...++..|++++
T Consensus 60 ~~~~~~~~~r~~la~~~g~~~-~~~i~~~~~~t~~i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~ 138 (401)
T PRK10874 60 RLTARYEAAREQVAQLLNAPD-AKNIVWTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVV 138 (401)
T ss_pred HHHHHHHHHHHHHHHHcCCCC-CCEEEEECCHHHHHHHHHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEE
Confidence 445777888999999999942 23589999999999888777632 2488999999999976 4566788899999
Q ss_pred EEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccC
Q 011842 210 KVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKA 289 (476)
Q Consensus 210 ~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~ 289 (476)
.+|.+.++.+|+++|++.+.++++ +|++++++++||.+.|+++|+++|+++|+ ++++|++|+.+..+
T Consensus 139 ~v~~~~~~~~d~~~l~~~i~~~t~---lv~i~~~~n~tG~~~~~~~i~~l~~~~g~-----~~ivD~a~~~g~~~----- 205 (401)
T PRK10874 139 KLPLGADRLPDVDLLPELITPRTR---ILALGQMSNVTGGCPDLARAITLAHQAGM-----VVMVDGAQGAVHFP----- 205 (401)
T ss_pred EEecCCCCcCCHHHHHHhcCcCcE---EEEEeCCcccccCcCCHHHHHHHHHHcCC-----EEEEECCccccccc-----
Confidence 999988889999999999977665 88899999999999999999999999999 99999999765554
Q ss_pred CCCCCcc-cccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCc---------c---ccCCC-CCc-ccCCCCChhHHHH
Q 011842 290 PKVSFKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNV---------E---YLASR-DAT-IMGSRNGHAPIFL 354 (476)
Q Consensus 290 ~~~~~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~---------~---yl~~~-~~~-~~~sr~~~~~l~~ 354 (476)
++... .+|++++++||++ +|.|+|+++++++.++.+.... . |-... ... ..|+.+....+++
T Consensus 206 --~~~~~~~~d~~~~s~~K~~-gp~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al 282 (401)
T PRK10874 206 --ADVQALDIDFYAFSGHKLY-GPTGIGVLYGKSELLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGL 282 (401)
T ss_pred --CCchhcCCCEEEEeccccc-CCCccEEEEEchHHHhcCCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHH
Confidence 23322 3899999999965 4889999999988766543211 0 00000 011 1355555566778
Q ss_pred HHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhc-CCeEeecCCeeEEEEecCC--cHHHh-----hceeec----cc---
Q 011842 355 WYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDA-GISAMLNELSSTVVFERPQ--DEEFV-----RRWQLA----CQ--- 419 (476)
Q Consensus 355 ~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~-g~~~~~~~~~~iv~f~~~~--~~~~~-----~~~~l~----~~--- 419 (476)
.++++.+...++.+..++..++++++.+.|++. |+....++.+++++|..++ ..++. +++.+. |.
T Consensus 283 ~~al~~l~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~L~~~gI~v~~g~~~~~~~ 362 (401)
T PRK10874 283 SAALEWLADIDINQAESWSRSLATLAEDALAKLPGFRSFRCQDSSLLAFDFAGVHHSDLVTLLAEYGIALRAGQHCAQPL 362 (401)
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCcEEEEEECCcCHHHHHHHHHHCCcEEeccccchHHH
Confidence 888888777788888899999999999999987 5544444566788887653 22222 223331 11
Q ss_pred ------CCEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Q 011842 420 ------GNIAHVVVMPNVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 420 ------~~~lRv~~~~~~T~edid~~~~~l~~~~~~ 449 (476)
.+.+|++++.++|++|||+|+++|+++.+.
T Consensus 363 ~~~~g~~~~iRiS~~~~nt~edid~ll~al~~~~~~ 398 (401)
T PRK10874 363 LAALGVTGTLRASFAPYNTQSDVDALVNAVDRALEL 398 (401)
T ss_pred HHHhCCCCEEEEEecccCCHHHHHHHHHHHHHHHHH
Confidence 368999999999999999999999998764
No 23
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.97 E-value=4.9e-28 Score=247.74 Aligned_cols=294 Identities=15% Similarity=0.129 Sum_probs=216.1
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhh-CCCcEEEecCCCchHHHHHHH---HcCCeEEEE
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREV-FPDGILYASRESHYSVFKAAR---MYRMECVKV 211 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~-~p~~~Vl~s~~~H~S~~~~~~---~~G~~v~~v 211 (476)
...++.+++++++++++|.+++ ++++|+|+|+++..++.++... .++++|+++..+|+++..... ..|++++.+
T Consensus 39 ~~~~~~~~~r~~la~~~g~~~~--~i~~t~~~t~a~~~al~~~~~~~~~~~~vv~~~~~~~s~~~~~~~~~~~G~~v~~v 116 (379)
T TIGR03402 39 EVGKAVEEAREQVAKLLGAEPD--EIIFTSGGTESDNTAIKSALAAQPEKRHIITTAVEHPAVLSLCQHLEKQGYKVTYL 116 (379)
T ss_pred HHHHHHHHHHHHHHHHhCCCCC--eEEEeCcHHHHHHHHHHHHHHhcCCCCeEEEcccccHHHHHHHHHHHHcCCEEEEE
Confidence 3457778899999999999753 5999999999999998876532 256899999999998765443 359999999
Q ss_pred eCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCC
Q 011842 212 DCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPK 291 (476)
Q Consensus 212 ~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~ 291 (476)
|.+.+|.+|+++|++++.++++ +++++++++++|.+.|+++|.++|++||+ ++|+|++|+.+..+
T Consensus 117 ~~~~~g~~~~~~l~~~i~~~~~---lv~i~~~~n~tG~~~~~~~I~~l~~~~g~-----~vivD~~~~~g~~~------- 181 (379)
T TIGR03402 117 PVDEEGRLDLEELRAAITDDTA---LVSVMWANNETGTIFPIEEIGEIAKERGA-----LFHTDAVQAVGKIP------- 181 (379)
T ss_pred ccCCCCcCCHHHHHHhcCCCcE---EEEEEcccCCeeecccHHHHHHHHHHcCC-----EEEEECcccccccc-------
Confidence 9988899999999999976654 88888999999999999999999999999 99999999876554
Q ss_pred CCCcc-cccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCC--CCcccCCCCChhHHHHHHHHHHhChhcHHH
Q 011842 292 VSFKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASR--DATIMGSRNGHAPIFLWYTLNRKGYKGFQK 368 (476)
Q Consensus 292 ~~~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~--~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~ 368 (476)
++..+ .+|++++++|| +++|.|+|+++++++.. + .+.+.... ...-.++.+....+++.++++.. .+.+++
T Consensus 182 ~~~~~~~~D~~~~s~~K-~~gp~G~g~l~v~~~~~--~--~p~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~-~~~~~~ 255 (379)
T TIGR03402 182 IDLKEMNIDMLSLSGHK-LHGPKGVGALYIRKGTR--F--RPLLRGGHQERGRRAGTENVPGIVGLGKAAELA-TEHLEE 255 (379)
T ss_pred cCcccCCCCEEEEcHHH-cCCCCceEEEEECCCCC--C--CCcccCCccCCCcCCCCccHHHHHHHHHHHHHH-HHhHHH
Confidence 44444 49999999999 56699999999987631 1 11111110 11123444444445555666554 346777
Q ss_pred HHHHHHHHHHHHHHHHHh-cCCeEeecC-C---eeEEEEecC--CcHHHhh-----ceeec----c--------------
Q 011842 369 EVQKCLRNAHYLKDRLLD-AGISAMLNE-L---SSTVVFERP--QDEEFVR-----RWQLA----C-------------- 418 (476)
Q Consensus 369 ~~~~~~~~a~~l~~~L~~-~g~~~~~~~-~---~~iv~f~~~--~~~~~~~-----~~~l~----~-------------- 418 (476)
+.++..++++++++.|++ .+...+..+ . +.++.|..+ +..++.. +..+. |
T Consensus 256 ~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~v~~g~~c~~~~~~~~~~~~~l 335 (379)
T TIGR03402 256 ENTRVRALRDRLEAGLLARIPDARLNGDPTKRLPNTVNISFEYIEGEAILLLLDMEGICASSGSACTSGSLEPSHVLRAM 335 (379)
T ss_pred HHHHHHHHHHHHHHHHHhhCCCEEEeCCCccCCCCEEEEEecCCCHHHHHHhhccCCEEEEchhhcCCCCCCcCHHHHHc
Confidence 788899999999999985 544344332 1 235555433 3333332 22221 1
Q ss_pred ------cCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHh
Q 011842 419 ------QGNIAHVVVMPNVTIDKLDDFLNELIENRSTWYE 452 (476)
Q Consensus 419 ------~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~~ 452 (476)
..+.+|++++.++|++|||++++.|+++.+++.+
T Consensus 336 g~~~~~~~~~vR~S~~~~~t~~di~~~~~~l~~~~~~~~~ 375 (379)
T TIGR03402 336 GVPHTAAHGSIRFSLSRYNTEEDIDYVLEVLPPIIARLRA 375 (379)
T ss_pred CCChhhcCceEEEEcCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 0257999999999999999999999999877553
No 24
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.97 E-value=3.4e-28 Score=251.26 Aligned_cols=295 Identities=14% Similarity=0.071 Sum_probs=223.2
Q ss_pred hHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHH--hhCCCcEEEecCCCchHH----HHHHHHcCCeEEE
Q 011842 137 SRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGR--EVFPDGILYASRESHYSV----FKAARMYRMECVK 210 (476)
Q Consensus 137 ~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~--~~~p~~~Vl~s~~~H~S~----~~~~~~~G~~v~~ 210 (476)
..+..+++++.+++++|..+ +.++++|+|+|+++..++.+.. ...+++.|++++.+|.+. ...++..|++++.
T Consensus 65 ~~~~~~~~r~~la~~~~~~~-~~~v~~t~g~t~~l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~ 143 (406)
T PRK09295 65 ATEKMENVRKQAALFINARS-AEELVFVRGTTEGINLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRV 143 (406)
T ss_pred HHHHHHHHHHHHHHHcCcCC-CCeEEEeCCHHHHHHHHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEE
Confidence 45667778899999999842 2359999999999888776642 224889999999999763 5566778999999
Q ss_pred EeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCC
Q 011842 211 VDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAP 290 (476)
Q Consensus 211 v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~ 290 (476)
++.+.++.+|+++|++++.++++ +|++++++|++|.+.|+++|.++|+++|+ ++++|++|+.+..+
T Consensus 144 v~~~~~~~~d~~~l~~~i~~~t~---lv~l~~~~n~tG~~~~~~~i~~~~~~~~~-----~vivD~a~~~g~~~------ 209 (406)
T PRK09295 144 IPLNPDGTLQLETLPALFDERTR---LLAITHVSNVLGTENPLAEMIALAHQHGA-----KVLVDGAQAVMHHP------ 209 (406)
T ss_pred EecCCCCCCCHHHHHHhcCCCcE---EEEEecchhcccccCCHHHHHHHHHHcCC-----EEEEEcccccCccc------
Confidence 99988899999999999976654 88899999999999999999999999999 99999999876554
Q ss_pred CCCCcc-cccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCc------ccc-------CCC--CCcccCCCCChhHHHH
Q 011842 291 KVSFKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNV------EYL-------ASR--DATIMGSRNGHAPIFL 354 (476)
Q Consensus 291 ~~~~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~------~yl-------~~~--~~~~~~sr~~~~~l~~ 354 (476)
+++.+ .+|++++|+||+++ |.|+|++++++++++.+.... .+. ... ..-..|+++....+++
T Consensus 210 -~~~~~~~~D~~~~s~~K~~g-p~G~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l 287 (406)
T PRK09295 210 -VDVQALDCDFYVFSGHKLYG-PTGIGILYVKEALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGL 287 (406)
T ss_pred -cCchhcCCCEEEeehhhccC-CCCcEEEEEchHhHhhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHH
Confidence 44433 38999999999554 889999999988765442100 000 000 0112456666666778
Q ss_pred HHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecC--CeeEEEEecCC--cHHHh---h--ceeec----cc--
Q 011842 355 WYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNE--LSSTVVFERPQ--DEEFV---R--RWQLA----CQ-- 419 (476)
Q Consensus 355 ~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~--~~~iv~f~~~~--~~~~~---~--~~~l~----~~-- 419 (476)
+.+++.+...|++++.++..++++++.+.|++.+...+..+ ..+++.|..+. ..++. . ++.+. |.
T Consensus 288 ~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~~~L~~~gI~v~~g~~c~~~ 367 (406)
T PRK09295 288 GAALDYVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQNRLGVIAFNLGKHHAYDVGSFLDNYGIAVRTGHHCAMP 367 (406)
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCceEEEEEECCcCHHHHHHHHHhCCeEEeccccchHH
Confidence 88888887778899999999999999999998754344333 25788887663 22222 1 22231 11
Q ss_pred -------CCEEEEEEcCCCCHHHHHHHHHHHHHHHH
Q 011842 420 -------GNIAHVVVMPNVTIDKLDDFLNELIENRS 448 (476)
Q Consensus 420 -------~~~lRv~~~~~~T~edid~~~~~l~~~~~ 448 (476)
.+.+|+|++.++|++|||+|+++|+++.+
T Consensus 368 ~~~~~~~~~~iRiS~~~ynt~~did~l~~~l~~i~~ 403 (406)
T PRK09295 368 LMAYYNVPAMCRASLAMYNTHEEVDRLVAGLQRIHR 403 (406)
T ss_pred HHHHHCCCCEEEEEccCCCCHHHHHHHHHHHHHHHH
Confidence 24799999999999999999999998754
No 25
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.97 E-value=7e-28 Score=248.58 Aligned_cols=296 Identities=15% Similarity=0.094 Sum_probs=221.7
Q ss_pred HHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHh--hCCCcEEEecCCCchHH----HHHHHHcCCeEEEE
Q 011842 138 RQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGRE--VFPDGILYASRESHYSV----FKAARMYRMECVKV 211 (476)
Q Consensus 138 ~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~--~~p~~~Vl~s~~~H~S~----~~~~~~~G~~v~~v 211 (476)
.+..+++++.+++++|.+.. ..+++|+|+|+++..++.+... ..+++.|++++.+|.|. ...++..|++++.+
T Consensus 61 ~~~~~~~r~~ia~~~~~~~~-~~v~~~~g~t~~l~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v 139 (403)
T TIGR01979 61 TEAYEAVREKVAKFINAASD-EEIVFTRGTTESINLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFI 139 (403)
T ss_pred HHHHHHHHHHHHHHhCcCCC-CeEEEeCCHHHHHHHHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEE
Confidence 45666788889999999732 3599999999998877765421 24789999999999874 45667789999999
Q ss_pred eCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCC
Q 011842 212 DCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPK 291 (476)
Q Consensus 212 ~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~ 291 (476)
+++++|.+|+++|++++.++++ +|+++++++++|.+.|+++|.++|++||+ ++|+|++|+.+..+
T Consensus 140 ~~~~~~~~~~~~l~~~i~~~~~---lv~~~~~~~~tG~~~~~~~i~~~~~~~~~-----~~ivD~a~~~g~~~------- 204 (403)
T TIGR01979 140 PLDDDGTLDLDDLEKLLTEKTK---LVAITHVSNVLGTVNPVEEIAKLAHQVGA-----KVLVDGAQAVPHMP------- 204 (403)
T ss_pred ecCCCCCCCHHHHHHHhccCCe---EEEEEcccccccccCCHHHHHHHHHHcCC-----EEEEEchhhcCccc-------
Confidence 9998899999999999976554 88899999999999999999999999999 99999999876554
Q ss_pred CCCcc-cccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCc------ccc-C-C-----CCCcc-cCCCCChhHHHHHH
Q 011842 292 VSFKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNV------EYL-A-S-----RDATI-MGSRNGHAPIFLWY 356 (476)
Q Consensus 292 ~~~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~------~yl-~-~-----~~~~~-~~sr~~~~~l~~~~ 356 (476)
+++.+ .+|+++.++||+++ |.|+|++++++++++.+.... .+. . . ....+ .++++....++++.
T Consensus 205 ~~~~~~~~d~~~~s~~K~~g-p~G~g~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~ 283 (403)
T TIGR01979 205 VDVQALDCDFYVFSGHKMYG-PTGIGVLYGKEELLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGA 283 (403)
T ss_pred cCccccCCCEEEEecccccC-CCCceEEEEchHHHhcCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHH
Confidence 33333 38999999999875 889999999987665542110 000 0 0 00011 24555455667778
Q ss_pred HHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCCeEee-cC----CeeEEEEecCC--cHHHhh-----ceeecc------
Q 011842 357 TLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAML-NE----LSSTVVFERPQ--DEEFVR-----RWQLAC------ 418 (476)
Q Consensus 357 ~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~-~~----~~~iv~f~~~~--~~~~~~-----~~~l~~------ 418 (476)
+++.+...|++++.++..++++++.+.|++.+...+. ++ .+++++|..++ ..++.+ ++.+..
T Consensus 284 al~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~v~~g~~~~~ 363 (403)
T TIGR01979 284 AIDYLEAIGLENIEAHEHELTAYALERLGEIPGLRIYGPRDAEDRGGIISFNVEGVHPHDVGTILDEEGIAVRSGHHCAQ 363 (403)
T ss_pred HHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccccCceEEEEeCCcCHHHHHHHHhhCCEEEcchhhhhH
Confidence 8877766688899999999999999999987433343 32 25788887653 222221 222211
Q ss_pred -------cCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 011842 419 -------QGNIAHVVVMPNVTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 419 -------~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~ 450 (476)
..+.+|++++.++|++||++|+++|+++.+.+
T Consensus 364 ~~~~~~~~~~~iRiS~~~~~t~~di~~l~~~l~~~~~~~ 402 (403)
T TIGR01979 364 PLMRRFGVPATCRASFYIYNTEEDIDALVEALKKVRKFF 402 (403)
T ss_pred HHHHHhCCCCEEEEEeccCCCHHHHHHHHHHHHHHHHHh
Confidence 13579999999999999999999999887654
No 26
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.97 E-value=1.1e-27 Score=244.84 Aligned_cols=290 Identities=18% Similarity=0.143 Sum_probs=219.1
Q ss_pred HHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHH----HHHHHcCCeEEEEeC
Q 011842 138 RQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVF----KAARMYRMECVKVDC 213 (476)
Q Consensus 138 ~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~----~~~~~~G~~v~~v~~ 213 (476)
.....++++++++++|.+.. ..+++|+|+|+++..++.+... +++.|+++..+|.++. ..++..|++++.++.
T Consensus 43 ~~~~~~~~~~la~~~~~~~~-~~v~~~~g~t~al~~~~~~~~~--~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~ 119 (376)
T TIGR01977 43 SREVEETRQLLAKLFNAPSS-AHVVFTNNATTALNIALKGLLK--EGDHVITTPMEHNSVARPLECLKEQIGVEITIVKC 119 (376)
T ss_pred HHHHHHHHHHHHHHhCcCCC-CeEEEeCCHHHHHHHHHHhccC--CCCEEEECcchhhHHHHHHHHHHHHcCcEEEEEec
Confidence 46677788899999998643 3589999999999888777443 8999999999998864 455666999999999
Q ss_pred CCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCC
Q 011842 214 LISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVS 293 (476)
Q Consensus 214 ~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~ 293 (476)
++++.+|+++|++++.+++ .+|++++++|++|.+.|+++|.++|+++|+ ++++|++|+.+..+ ++
T Consensus 120 ~~~~~~d~~~l~~~~~~~~---~~v~~~~~~n~tG~~~~~~~i~~l~~~~~~-----~livD~a~~~g~~~-------~~ 184 (376)
T TIGR01977 120 DNEGLISPERIKRAIKTNT---KLIVVSHASNVTGTILPIEEIGELAQENGI-----FFILDAAQTAGVIP-------ID 184 (376)
T ss_pred CCCCCcCHHHHHHhcCCCC---eEEEEECCCCCccccCCHHHHHHHHHHcCC-----EEEEEhhhccCccC-------CC
Confidence 8888999999999996554 488899999999999999999999999999 99999999877665 33
Q ss_pred Ccc-cccEEEEcCCCCCCCCCCceeEEeehhh-hhhhcCC-----ccccCCC----CCcccCCCCChhHHHHHHHHHHhC
Q 011842 294 FKK-PIGSVSVSGHKFVGCPMPCGVQITRMEH-INVLSSN-----VEYLASR----DATIMGSRNGHAPIFLWYTLNRKG 362 (476)
Q Consensus 294 ~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~-~~~l~~~-----~~yl~~~----~~~~~~sr~~~~~l~~~~~l~~~g 362 (476)
+.. .+|++++++|||+++|.++|+++++++. ++.+... ..+.... ..-..++.+....++++.+++.+.
T Consensus 185 ~~~~~~D~~~~s~~K~l~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~t~~~~~~~a~~~al~~~~ 264 (376)
T TIGR01977 185 MTELAIDMLAFTGHKGLLGPQGTGGLYIREGIKLKPLKSGGTGSHSALIDQPSELPDRFESGTLNTPGIAGLNAGIKFIE 264 (376)
T ss_pred chhcCCCEEEecccccccCCCCceEEEEcCCcCcCceecCCCccccccccccccchhhccCCCCCHHHHHHHHHHHHHHH
Confidence 333 4999999999999999999999998764 2222110 0011000 001124555555667778888888
Q ss_pred hhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecC-----CeeEEEEecCC-c-HHHh----h--ceeec----c-------
Q 011842 363 YKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNE-----LSSTVVFERPQ-D-EEFV----R--RWQLA----C------- 418 (476)
Q Consensus 363 ~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~-----~~~iv~f~~~~-~-~~~~----~--~~~l~----~------- 418 (476)
..|.+++.++.+++++++.+.|++.+...+..+ ..++++|..++ + .++. + ++.+. +
T Consensus 265 ~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~~ 344 (376)
T TIGR01977 265 KIGIANIAKKECMLTEKLLNGLREINKVKIYGPADPANRVGVVSFTVEGIDSEEVADILDEKFDIATRTGLHCAPLAHKT 344 (376)
T ss_pred HhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCccccCCeEEEEECCCCHHHHHHHHhccCCEEEEcccccchHHHHH
Confidence 889999999999999999999998654444332 24677777653 2 2222 1 22221 1
Q ss_pred ----cCCEEEEEEcCCCCHHHHHHHHHHHHH
Q 011842 419 ----QGNIAHVVVMPNVTIDKLDDFLNELIE 445 (476)
Q Consensus 419 ----~~~~lRv~~~~~~T~edid~~~~~l~~ 445 (476)
..+.+|++++.++|.+||++++++|++
T Consensus 345 ~g~~~~~~iRis~~~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 345 IGTFATGTIRLSLGYFNTEEEIEKLLEALSE 375 (376)
T ss_pred hCCCCCCeEEEecCCCCCHHHHHHHHHHHhh
Confidence 236899999999999999999999975
No 27
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.97 E-value=3.3e-27 Score=247.93 Aligned_cols=356 Identities=14% Similarity=0.136 Sum_probs=242.2
Q ss_pred CcHHHHHHHHHHHHhcccc---cc--cCCCCcCCcchHHHHHHHHHhhCCCCCCcccCccchhhHHHHHHHHHHHHHHcC
Q 011842 79 AYMAGVLARYRKTLMERTK---HH--LGYPYNLDFDYGALAQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWE 153 (476)
Q Consensus 79 ~~~~~il~~~~~~~~~~~~---~~--~g~p~~~~~~~~~l~~~l~~~~n~~g~~~~~~~~~~~~~~le~~~~~~la~l~g 153 (476)
.+-.++++.+++....+.. .+ .|+|++. +++.....++.......-.++.......+..+++.++.+++++++|
T Consensus 49 ~se~~~~~~~~~l~~~n~~~~~~~~g~G~~~~~-~~p~i~~~~~~~~~~~~~tpYq~e~~sqG~lel~~~~~~~la~l~G 127 (481)
T PRK04366 49 VSELEVVRHYTRLSQKNYGVDTGFYPLGSCTMK-YNPKINEKVARLPGFAELHPLQPEETVQGALELMYELQEWLKEITG 127 (481)
T ss_pred CCHHHHHHHHHHHHhcCCCCCcceecCcccCCC-CCHHHHHHHHhCcchhcCCCCCChhhhhHHHHHHHHHHHHHHHHhC
Confidence 4567888888877655432 22 3444433 2334444444431111112231112344677999999999999999
Q ss_pred CCCCcccEEEcCCchhHHHHHHHHHHh--hCCCc----EEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccCHHHHHHH
Q 011842 154 LENNEYWGYITNCGTEGNLHGILVGRE--VFPDG----ILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCADFKAK 227 (476)
Q Consensus 154 ~~~~~~~g~~t~ggt~An~~al~aa~~--~~p~~----~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~~~Le~~ 227 (476)
++. ..+..++|+.+.+.++.+++. ..+++ .|+++++.|.++...++..|++++.+|++.++.+|+++|+++
T Consensus 128 ~~~---~~l~~~~GA~a~~~~l~~~r~~~~~~Gd~~~~~Vlv~~~~hp~~~~~~~~~G~~vv~v~~~~~~~~D~e~L~~~ 204 (481)
T PRK04366 128 MDA---VTLQPAAGAHGELTGLLMIRAYHEARGDTKRTEVIVPDSAHGTNPASAAMAGFKVVEIPSNEDGLVDLEALKAA 204 (481)
T ss_pred CCc---eEEEeCcHHHHHHHHHHHHHHHhhccCcCCCCEEEEcCCccHhHHHHHHHcCCEEEEeecCCCCCcCHHHHHhh
Confidence 973 245556666777665544332 12444 899999999999999999999999999988899999999999
Q ss_pred HHcCCCCcEEEEEeeCCCccccc-cCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCcccccEEEEcCC
Q 011842 228 LLQNKDKPAIINVNIGTTVKGAV-DDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKPIGSVSVSGH 306 (476)
Q Consensus 228 l~~~~~~p~~vv~t~gtt~tG~i-d~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~~Dsi~~s~h 306 (476)
+.++++ +|++++++ ++|.+ +|+++|+++|+++|+ |+|||+|+..+.+.... ....++|++++++|
T Consensus 205 i~~~t~---~V~v~~Pn-~tG~~~~dl~eI~~~a~~~ga-----l~iVD~a~~~~~~g~~~-----~~~~GaD~~~~~~h 270 (481)
T PRK04366 205 VGEDTA---ALMLTNPN-TLGLFERNILEIAEIVHEAGG-----LLYYDGANLNAILGKAR-----PGDMGFDVVHLNLH 270 (481)
T ss_pred cccCCe---EEEEeCCC-CccccchHHHHHHHHHHHcCC-----EEEEEecChhhhcccCC-----ccccCCCEEEEech
Confidence 977664 67777776 89988 589999999999999 99999998644332111 01124999999999
Q ss_pred CCCCCCCCc-----eeEEeehhhhhhhcCC------ccccCCCC--Cc----ccCCCCChhHHHHHHHHHHhChhcHHHH
Q 011842 307 KFVGCPMPC-----GVQITRMEHINVLSSN------VEYLASRD--AT----IMGSRNGHAPIFLWYTLNRKGYKGFQKE 369 (476)
Q Consensus 307 K~l~~p~~~-----G~l~~~~~~~~~l~~~------~~yl~~~~--~~----~~~sr~~~~~l~~~~~l~~~g~~g~~~~ 369 (476)
||+++|.++ |++++++++.+.+... ..|....+ .. -.++.+...+++.|..+..+|.+|++++
T Consensus 271 K~l~~P~g~Ggp~~G~l~~~~~~~~~lp~~~v~~~g~~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~G~~Gl~~~ 350 (481)
T PRK04366 271 KTFSTPHGGGGPGSGPVGVKEELAPFLPVPVVEKDGDRYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRSLGAEGLREV 350 (481)
T ss_pred hhcCCCCCCCCCCeeeeeehhhhHhhCCCCeeeccCCceeecccccccCCCcccccCchHHHHHHHHHHHHHHHHHHHHH
Confidence 999988655 5899998876655311 01211110 00 1122223446788889999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCeEeec-CCeeEEEEecC-------CcHHHh-----hceeec-----c-cCCEEEEEEcCC
Q 011842 370 VQKCLRNAHYLKDRLLDAGISAMLN-ELSSTVVFERP-------QDEEFV-----RRWQLA-----C-QGNIAHVVVMPN 430 (476)
Q Consensus 370 ~~~~~~~a~~l~~~L~~~g~~~~~~-~~~~iv~f~~~-------~~~~~~-----~~~~l~-----~-~~~~lRv~~~~~ 430 (476)
.++...+++||+++|++. +..... +..+.++|..+ ...++. +++.+. . ..+.+|++++..
T Consensus 351 a~~~~~~a~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~L~~~Gi~~~~~~~p~~~~~~l~is~~e~ 429 (481)
T PRK04366 351 SEDAVLNANYLKARLKDI-YDLPYDRPCMHEFVLSGKKLKETGVRTLDIAKRLLDYGFHPPTIYFPLIVPEALMIEPTET 429 (481)
T ss_pred HHHHHHHHHHHHHHhHhh-CcccCCCCeeEEEEEECccccccCCCHHHHHHHHHHCCccCCccccccccCCeEEEcccCC
Confidence 999999999999999986 322222 22233444321 122222 233332 1 246899999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhc
Q 011842 431 VTIDKLDDFLNELIENRSTWYED 453 (476)
Q Consensus 431 ~T~edid~~~~~l~~~~~~~~~~ 453 (476)
+|++|||+|+++|+++.++.+++
T Consensus 430 ~t~edid~l~~~l~~i~~~~~~~ 452 (481)
T PRK04366 430 ESKETLDAFIAAMKQIAEEAKEN 452 (481)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999888764
No 28
>PRK02948 cysteine desulfurase; Provisional
Probab=99.97 E-value=2.4e-27 Score=242.81 Aligned_cols=295 Identities=15% Similarity=0.131 Sum_probs=218.3
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhh--CCCcEEEecCCCchHHHHH---HHHcCCeEEE
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREV--FPDGILYASRESHYSVFKA---ARMYRMECVK 210 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~--~p~~~Vl~s~~~H~S~~~~---~~~~G~~v~~ 210 (476)
...++.+++++.+++++|.+++ ++++|+|+|+++..++.++... .+++.|+++..+|+|+... ++..|++++.
T Consensus 40 ~~~~~~~~~r~~la~~~g~~~~--~i~~~~g~t~a~~~~~~~~~~~~~~~g~~vv~~~~~h~s~~~~~~~~~~~g~~v~~ 117 (381)
T PRK02948 40 TASSLLQVCRKTFAEMIGGEEQ--GIYFTSGGTESNYLAIQSLLNALPQNKKHIITTPMEHASIHSYFQSLESQGYTVTE 117 (381)
T ss_pred HHHHHHHHHHHHHHHHhCCCCC--eEEEeCcHHHHHHHHHHHHHHhccCCCCEEEECCcccHHHHHHHHHHHhCCCEEEE
Confidence 3457788899999999998754 4899999999999888777542 3678999999999987654 4556999999
Q ss_pred EeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCC
Q 011842 211 VDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAP 290 (476)
Q Consensus 211 v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~ 290 (476)
+++++++.+|+++|++.+.++++ +|++++++|+||.+.|+++|.++|+++|+ ++|+|++++.+..+
T Consensus 118 v~~~~~~~~d~~~l~~~l~~~~~---lv~~~~~~n~tG~~~~~~~I~~l~~~~~~-----~vivD~~~~~g~~~------ 183 (381)
T PRK02948 118 IPVDKSGLIRLVDLERAITPDTV---LASIQHANSEIGTIQPIAEIGALLKKYNV-----LFHSDCVQTFGKLP------ 183 (381)
T ss_pred EeeCCCCCCCHHHHHHhcCCCCE---EEEEECCcCCcEeehhHHHHHHHHHHcCC-----EEEEEChhhccccc------
Confidence 99988899999999999876553 89899999999999999999999999999 99999998755444
Q ss_pred CCCCcc-cccEEEEcCCCCCCCCCCceeEEeehhh-hhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHH
Q 011842 291 KVSFKK-PIGSVSVSGHKFVGCPMPCGVQITRMEH-INVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQK 368 (476)
Q Consensus 291 ~~~~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~-~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~ 368 (476)
++..+ .+|+++.++||+++ |.|+|+++++++. +..+.. ..........++.+....+++.++++.+. +..++
T Consensus 184 -~~~~~~~~d~~~~s~~K~~g-p~G~G~l~~~~~~~~~~~~~---~~~~~~~~~~~t~~~~~~~a~~~al~~~~-~~~~~ 257 (381)
T PRK02948 184 -IDVFEMGIDSLSVSAHKIYG-PKGVGAVYINPQVRWKPVFP---GTTHEKGFRPGTVNVPGIAAFLTAAENIL-KNMQE 257 (381)
T ss_pred -cCcccCCCCEEEecHHhcCC-CCcEEEEEEcCCCCCCCccc---CCCCCCCcCCCCccHHHHHHHHHHHHHHH-HHHHH
Confidence 23333 38999999999876 8899999998764 111100 00001111234554444555556666542 45788
Q ss_pred HHHHHHHHHHHHHHHHHhcCCeEeecC-C----eeEEEEecCC--cHHHh-----hceeec----c--------------
Q 011842 369 EVQKCLRNAHYLKDRLLDAGISAMLNE-L----SSTVVFERPQ--DEEFV-----RRWQLA----C-------------- 418 (476)
Q Consensus 369 ~~~~~~~~a~~l~~~L~~~g~~~~~~~-~----~~iv~f~~~~--~~~~~-----~~~~l~----~-------------- 418 (476)
..++..++++++.+.|++.|+...... . ..++.|..+. ..++. +++.+. |
T Consensus 258 ~~~~~~~~~~~l~~~L~~~~~~v~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~gI~v~~g~~c~~~~~~p~~~~~~~ 337 (381)
T PRK02948 258 ESLRFKELRSYFLEQIQTLPLPIEVEGHSTSCLPHIIGVTIKGIEGQYTMLECNRRGIAISTGSACQVGKQEPSKTMLAI 337 (381)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCEEEeCCCccCcCCEEEEEeCCCCHHHHHHhcccCCEEEEchHhcCCCCCCCCHHHHHc
Confidence 889999999999999999886443321 1 2355565442 22222 222232 1
Q ss_pred ------cCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHh
Q 011842 419 ------QGNIAHVVVMPNVTIDKLDDFLNELIENRSTWYE 452 (476)
Q Consensus 419 ------~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~~ 452 (476)
.++.+|++++.++|++|||+++++|+++.+.+++
T Consensus 338 ~~~~~~~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~~~ 377 (381)
T PRK02948 338 GKTYEEAKQFVRFSFGQQTTKDQIDTTIHALETIGNQFYR 377 (381)
T ss_pred CCChHHhCceEEEEcCCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 1368999999999999999999999999988875
No 29
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.97 E-value=2.3e-27 Score=242.18 Aligned_cols=291 Identities=16% Similarity=0.119 Sum_probs=219.0
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhh-CCCcEEEecCCCchHH----HHHHHHcCCeEEE
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREV-FPDGILYASRESHYSV----FKAARMYRMECVK 210 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~-~p~~~Vl~s~~~H~S~----~~~~~~~G~~v~~ 210 (476)
...+...++++++++++|.+. +..+++|+|+|+++..++.++... .+++.|+++.++|++. ...++..|++++.
T Consensus 40 ~~~~~~~~~~~~la~~~~~~~-~~~v~~~~g~t~a~~~~~~~l~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~ 118 (373)
T cd06453 40 RATDAYEAAREKVARFINAPS-PDEIIFTRNTTEAINLVAYGLGRANKPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKV 118 (373)
T ss_pred HHHHHHHHHHHHHHHHhCCCC-CCeEEEeCCHHHHHHHHHHHhhhcCCCCCEEEECcchhHHHHHHHHHHHhhcCcEEEE
Confidence 345777788899999999872 235889999999998888776541 2788999999999984 4456678999999
Q ss_pred EeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCC
Q 011842 211 VDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAP 290 (476)
Q Consensus 211 v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~ 290 (476)
|+.+.++.+|+++|++++.+++ .+|++++++|++|.+.|+++|.++|++||+ |+|+|++|+.+..+
T Consensus 119 v~~~~~~~~d~~~l~~~l~~~~---~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~-----~li~D~a~~~~~~~------ 184 (373)
T cd06453 119 VPVDDDGQLDLEALEKLLTERT---KLVAVTHVSNVLGTINPVKEIGEIAHEAGV-----PVLVDGAQSAGHMP------ 184 (373)
T ss_pred eecCCCCCcCHHHHHHHhcCCc---eEEEEeCcccccCCcCCHHHHHHHHHHcCC-----EEEEEhhhhcCcee------
Confidence 9998889999999999997654 388889999999999999999999999999 99999999866554
Q ss_pred CCCCcc-cccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCc-c-------ccCCCC-----Ccc-cCCCCChhHHHHH
Q 011842 291 KVSFKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNV-E-------YLASRD-----ATI-MGSRNGHAPIFLW 355 (476)
Q Consensus 291 ~~~~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~-~-------yl~~~~-----~~~-~~sr~~~~~l~~~ 355 (476)
+++.+ ++|++++++|||++. .++|+++++++.++.+.... . +..... ..+ .++.+....+++|
T Consensus 185 -~~~~~~~~d~~~~s~~K~~~~-~g~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~ 262 (373)
T cd06453 185 -VDVQDLGCDFLAFSGHKMLGP-TGIGVLYGKEELLEEMPPYGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLG 262 (373)
T ss_pred -eeccccCCCEEEeccccccCC-CCcEEEEEchHHhhcCCCeecCCCccccccccccccCCCccccCCCCCCHHHHHHHH
Confidence 22323 489999999999986 88999999988765543210 0 000000 011 2345555677889
Q ss_pred HHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcC-CeEeecC--CeeEEEEecCC--cHHHh-----hceeec----c---
Q 011842 356 YTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAG-ISAMLNE--LSSTVVFERPQ--DEEFV-----RRWQLA----C--- 418 (476)
Q Consensus 356 ~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g-~~~~~~~--~~~iv~f~~~~--~~~~~-----~~~~l~----~--- 418 (476)
.+++.+...+++++.++..++++++.+.|++.+ +..+.++ ..++++|..+. ..++. +++.+. |
T Consensus 263 ~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~gi~i~~g~~~~~~ 342 (373)
T cd06453 263 AAIDYLEKIGMEAIAAHEHELTAYALERLSEIPGVRVYGDAEDRAGVVSFNLEGIHPHDVATILDQYGIAVRAGHHCAQP 342 (373)
T ss_pred HHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCeEEEEECCcCHHHHHHHHHHCCEEeccCccchhH
Confidence 999988888999999999999999999999985 4333222 24677777553 22222 233332 1
Q ss_pred ------cCCEEEEEEcCCCCHHHHHHHHHHH
Q 011842 419 ------QGNIAHVVVMPNVTIDKLDDFLNEL 443 (476)
Q Consensus 419 ------~~~~lRv~~~~~~T~edid~~~~~l 443 (476)
..+.+|++++..+|.+|||+|+++|
T Consensus 343 ~~~~~~~~~~iRis~~~~~t~~di~~~~~~l 373 (373)
T cd06453 343 LMRRLGVPGTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred HHHHhCCCCeEEEEecCCCCHHHHHHHHhhC
Confidence 1368999999999999999999864
No 30
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.97 E-value=3.3e-27 Score=245.25 Aligned_cols=296 Identities=14% Similarity=0.096 Sum_probs=222.0
Q ss_pred HHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHH--hhCCCcEEEecCCCchHH----HHHHHHcCCeEEEE
Q 011842 138 RQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGR--EVFPDGILYASRESHYSV----FKAARMYRMECVKV 211 (476)
Q Consensus 138 ~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~--~~~p~~~Vl~s~~~H~S~----~~~~~~~G~~v~~v 211 (476)
.+..+++++.+++++|.++ +..+++|+|+|+++...+.+.. ...+|+.|+++..+|.|. ...++..|++++.+
T Consensus 75 ~~~~~~~r~~la~~~~~~~-~~~v~~t~g~t~al~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v 153 (424)
T PLN02855 75 TDAYELARKKVAAFINAST-SREIVFTRNATEAINLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFV 153 (424)
T ss_pred HHHHHHHHHHHHHHcCCCC-CCEEEEeCCHHHHHHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEE
Confidence 4556778899999999963 2359999999999887766531 234789999999999864 45667789999999
Q ss_pred eCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCC
Q 011842 212 DCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPK 291 (476)
Q Consensus 212 ~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~ 291 (476)
+++.++.+|+++|++.|.++++ +|+++++++++|.+.|+++|+++|+++|+ ++++|++|+.+..+
T Consensus 154 ~~~~~~~~~~~~l~~~i~~~t~---lv~i~~~~n~tG~~~~~~~I~~l~~~~g~-----~vivD~a~~~g~~~------- 218 (424)
T PLN02855 154 GLTPDEVLDVEQLKELLSEKTK---LVATHHVSNVLGSILPVEDIVHWAHAVGA-----KVLVDACQSVPHMP------- 218 (424)
T ss_pred ecCCCCCcCHHHHHHHhccCce---EEEEeCccccccccCCHHHHHHHHHHcCC-----EEEEEhhhhcCCcC-------
Confidence 9987788999999999976554 88899999999999999999999999999 99999999765544
Q ss_pred CCCcc-cccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCc--------cccCC------CCCcccCCCCChhHHHHHH
Q 011842 292 VSFKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNV--------EYLAS------RDATIMGSRNGHAPIFLWY 356 (476)
Q Consensus 292 ~~~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~--------~yl~~------~~~~~~~sr~~~~~l~~~~ 356 (476)
+++.+ .+|++++++||++ +|.|+|++++++++++.+.... .|... ...-..||++....+.+++
T Consensus 219 ~~~~~~~~d~~~~s~~K~~-gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~ 297 (424)
T PLN02855 219 VDVQTLGADFLVASSHKMC-GPTGIGFLWGKSDLLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGA 297 (424)
T ss_pred CCchhcCCCEEEeeccccc-CCCccEEEEEchhhhhcCCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHH
Confidence 34433 3899999999965 5889999999988765542110 01000 0111235555555667778
Q ss_pred HHHHhChhcHHHHHHHHHHHHHHHHHHHHhc-CCeEeecC------CeeEEEEecCC--cHHHh----h--ceeec----
Q 011842 357 TLNRKGYKGFQKEVQKCLRNAHYLKDRLLDA-GISAMLNE------LSSTVVFERPQ--DEEFV----R--RWQLA---- 417 (476)
Q Consensus 357 ~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~-g~~~~~~~------~~~iv~f~~~~--~~~~~----~--~~~l~---- 417 (476)
+++.+...|++++.++..++++++++.|++. ++..+.+. ..+++.|..+. ..++. + ++.+.
T Consensus 298 al~~~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~~r~~~v~~~~~~~~~~~v~~~L~~~~gI~v~~g~~ 377 (424)
T PLN02855 298 AIDYLSEIGMDRIHEYEVELGTYLYEKLSSVPGVRIYGPKPSEGVGRAALCAFNVEGIHPTDLSTFLDQQHGVAIRSGHH 377 (424)
T ss_pred HHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCcccccCcccEEEEEECCcCHHHHHHHhcccCCEEEechhh
Confidence 8887767799999999999999999999887 44444321 14688888763 22222 1 23322
Q ss_pred cc---------CCEEEEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 011842 418 CQ---------GNIAHVVVMPNVTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 418 ~~---------~~~lRv~~~~~~T~edid~~~~~l~~~~~~~ 450 (476)
|. ...+|++++.++|.+|||+|+++|+++.+.+
T Consensus 378 c~~~~~~~~g~~~~iRiS~~~ynt~~di~~l~~~l~~~~~~~ 419 (424)
T PLN02855 378 CAQPLHRYLGVNASARASLYFYNTKEEVDAFIHALKDTIAFF 419 (424)
T ss_pred hhHHHHHHhCCCCeEEEEeccCCCHHHHHHHHHHHHHHHHHH
Confidence 10 2579999999999999999999999988764
No 31
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.96 E-value=5.6e-27 Score=240.24 Aligned_cols=289 Identities=16% Similarity=0.121 Sum_probs=207.0
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHh-h--CC-CcEEEecCCCchHHHHH---HHHcCCeEEEE
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGRE-V--FP-DGILYASRESHYSVFKA---ARMYRMECVKV 211 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~-~--~p-~~~Vl~s~~~H~S~~~~---~~~~G~~v~~v 211 (476)
.+++ .++.+.+.+|..+ +.++++|+|+|+++..+++++.. . .+ ++.|+++..+|+++... ++..|++++.+
T Consensus 43 ~l~~-a~~~~~~~~~~~~-~~~i~~t~g~teal~~~~~~~~~~~~~~~~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v 120 (382)
T TIGR03403 43 AIAE-ALDKLYKGINARD-LDDIIITSCATESNNWVLKGVYFDEILKGGKNHIITTEVEHPAVRATCAFLESLGVEVTYL 120 (382)
T ss_pred HHHH-HHHHHHHHcCcCC-CCeEEEeCCHHHHHHHHHHHHHHhhcccCCCCEEEEcCCccHHHHHHHHHHHHCCCEEEEE
Confidence 4444 4444555677631 23599999999999988876531 0 14 56899999999887654 34569999999
Q ss_pred eCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCC
Q 011842 212 DCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPK 291 (476)
Q Consensus 212 ~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~ 291 (476)
|+++++.+|+++|++++.++++ ++++++++|++|.+.|+++|.++|+++|+ ++|+|++++.+..+
T Consensus 121 ~~~~~g~~d~~~l~~~i~~~t~---lv~~~~~~n~tG~~~~~~~I~~la~~~g~-----~~ivD~a~~~g~~~------- 185 (382)
T TIGR03403 121 PINEQGTITAEQVREAITEKTA---LVSVMWANNETGMIFPIKEIGEICKERGV-----LFHTDAVQAIGKIP------- 185 (382)
T ss_pred ecCCCCCCCHHHHHHhcccCCe---EEEEEcccCCCccccCHHHHHHHHHHcCC-----EEEEechhhcCCCc-------
Confidence 9988899999999999977664 78889999999999999999999999999 99999999866554
Q ss_pred CCCcc-cccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCC--CCCcccCCCCChhHHHHHHHHHHhChhcHHH
Q 011842 292 VSFKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLAS--RDATIMGSRNGHAPIFLWYTLNRKGYKGFQK 368 (476)
Q Consensus 292 ~~~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~--~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~ 368 (476)
+++.+ .+|++++++|||++ |.|+|++++|+... + .+.+... ......++.+....+.+..+++.. .+.++.
T Consensus 186 ~~~~~~~~D~~~~s~~K~~g-p~G~g~l~vr~~~~--~--~p~~~g~~~~~~~~~gt~~~~~~~al~~al~~~-~~~~~~ 259 (382)
T TIGR03403 186 VDVQKAGVDFLSFSAHKFHG-PKGVGGLYIRKGVE--L--TPLFHGGEHMGGRRSGTLNVPYIVAMGEAMRLA-NEYLDF 259 (382)
T ss_pred cCccccCCCEEEEcchhhCC-CCceEEEEECCCCC--C--CCcccCCCCCCCcccCCcChHHHHHHHHHHHHH-HHhHHH
Confidence 34444 49999999999865 99999999987641 1 1111100 011123455444444565666544 335677
Q ss_pred HHHHHHHHHHHHHHHHHhcCCeEeecCC----eeEEEEecCC--cHHHhh-----ceeec----c---------------
Q 011842 369 EVQKCLRNAHYLKDRLLDAGISAMLNEL----SSTVVFERPQ--DEEFVR-----RWQLA----C--------------- 418 (476)
Q Consensus 369 ~~~~~~~~a~~l~~~L~~~g~~~~~~~~----~~iv~f~~~~--~~~~~~-----~~~l~----~--------------- 418 (476)
..++..++++++.+.|++.+...+..+. .+++.|..+. ...+.+ ++.+. |
T Consensus 260 ~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~v~~~~g 339 (382)
T TIGR03403 260 EKSHVRRLRDRLEDALLELPDVFVVGDREHRVPNTILISIKGVEGEAMLWDLNKAGIAASTGSACASEDLEANPVMVAIG 339 (382)
T ss_pred HHHHHHHHHHHHHHHHhcCCCEEEECCCCCCcCCEEEEEeCCCCHHHHHHhhccCCEEEEchhccCCCCCCcCHHHHHcC
Confidence 7888999999999999887544444332 3466666542 333322 22221 1
Q ss_pred -----cCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 011842 419 -----QGNIAHVVVMPNVTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 419 -----~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~ 450 (476)
.++.+|++++.++|++|||+|+++|+++.+++
T Consensus 340 ~~~~~~~~~iR~s~~~~~t~~did~~~~~l~~~~~~~ 376 (382)
T TIGR03403 340 ADKELAHTAIRLSLSRFTTEEEIDYTIEVFKKAVQRL 376 (382)
T ss_pred CChHHhCeeEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 12579999999999999999999999988764
No 32
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.96 E-value=4.5e-27 Score=241.23 Aligned_cols=292 Identities=16% Similarity=0.128 Sum_probs=212.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeC--CC
Q 011842 138 RQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDC--LI 215 (476)
Q Consensus 138 ~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~--~~ 215 (476)
.....++++.+++++|.+. .++|+|+|+||..++.+... +++.|+++..+|+|...+++..|++++.+++ ++
T Consensus 62 ~~~~~~l~~~lA~~~g~~~----~~~~~g~t~a~~~al~~l~~--~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~ 135 (387)
T PRK09331 62 KPPIADFHEDLAEFLGMDE----ARVTHGAREGKFAVMHSLCK--KGDYVVLDGLAHYTSYVAAERAGLNVREVPKTGYP 135 (387)
T ss_pred ChHHHHHHHHHHHHhCCCc----EEEeCCHHHHHHHHHHHhcC--CCCEEEECCCchHHHHHHHHHcCCEEEEEeCccCc
Confidence 3457778888999999863 78899999999999888765 8999999999999999999999999999998 67
Q ss_pred CCccCHHHHHHHHHcC----CCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCC
Q 011842 216 SGEIDCADFKAKLLQN----KDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPK 291 (476)
Q Consensus 216 ~g~~D~~~Le~~l~~~----~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~ 291 (476)
++.+|+++|+++|.+. ...+.+|+++++++++|.+.|+++|+++|++||+ ++|+|++|+.+.+|
T Consensus 136 ~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~~l~~I~~la~~~g~-----~livD~a~~~g~~~------- 203 (387)
T PRK09331 136 EYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLADAKKVAKVAHEYGI-----PFLLNGAYTVGRMP------- 203 (387)
T ss_pred CCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCcccccHHHHHHHHHHcCC-----EEEEECCcccCCcC-------
Confidence 7889999999999753 2346688899999999999999999999999999 99999999877665
Q ss_pred CCCcc-cccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCC-ccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHH
Q 011842 292 VSFKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSN-VEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKE 369 (476)
Q Consensus 292 ~~~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~-~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~ 369 (476)
+++.. ++|+++.++|||+++|.++|+++++++.++.+... ..|.......+.++.+...++.+++++..+. ...++
T Consensus 204 ~~~~~~g~D~~~~s~~K~l~~~~~~G~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aal~~~~--~~~~~ 281 (387)
T PRK09331 204 VDGKKLGADFIVGSGHKSMAASAPSGVLATTEEYADKVFRTSRKFGVKEVELLGCTLRGAPLVTLMASFPHVV--ERVKR 281 (387)
T ss_pred CCHHHcCCCEEEeeCcccccCCCCEEEEEECHHHHhhcccccCCCcccceeeeceecCchHHHHHHHHHHHHH--HHHHH
Confidence 33333 38999999999999999999999998876655322 2222111011222222233455555554432 12245
Q ss_pred HHHHHHHHHHHHHHHHhc-CCeEee--cCCeeEEEEecCCc-----------HHHhh-----cee-ecccCCEEEEEEcC
Q 011842 370 VQKCLRNAHYLKDRLLDA-GISAML--NELSSTVVFERPQD-----------EEFVR-----RWQ-LACQGNIAHVVVMP 429 (476)
Q Consensus 370 ~~~~~~~a~~l~~~L~~~-g~~~~~--~~~~~iv~f~~~~~-----------~~~~~-----~~~-l~~~~~~lRv~~~~ 429 (476)
+++.+++++++++.|++. |+..+. +..++++.+..+.- .++.+ ++. +......+|.+.+.
T Consensus 282 ~~~~~~~~~~l~~~L~~l~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~~~~~~~~i~ri~~~ 361 (387)
T PRK09331 282 WDEEVKKARWFVDELEKIEGFKQLGEKPRNHDLMKFETPSFDEIAKKHKRRGFFLYEELKKRGIHGIKPGATKEFKLSTY 361 (387)
T ss_pred HHHHHHHHHHHHHHHhcCCCEEEeccCcCcCCeEEEeCCchhHHhhhccccchhHHHHHHHcCceEEccCCceEEEEEec
Confidence 667788999999999998 665543 22356666654410 11211 222 12233344444445
Q ss_pred CCCHHHHHHHHHHHHHHHHH
Q 011842 430 NVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 430 ~~T~edid~~~~~l~~~~~~ 449 (476)
.+|++|+++++++|+++.++
T Consensus 362 g~t~~di~~l~~aL~~i~~~ 381 (387)
T PRK09331 362 GLTWEQVEYVADAFKEIAEK 381 (387)
T ss_pred cCCHHHHHHHHHHHHHHHHh
Confidence 58999999999999998765
No 33
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.96 E-value=6.8e-27 Score=238.66 Aligned_cols=287 Identities=19% Similarity=0.179 Sum_probs=221.1
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHh-hCCCcEEEecCCCchHHH----HHHHHcCCeEEE
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGRE-VFPDGILYASRESHYSVF----KAARMYRMECVK 210 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~-~~p~~~Vl~s~~~H~S~~----~~~~~~G~~v~~ 210 (476)
...++.+++++.+++++|.+++ ...++|+|+|+++..++...+. ..+++.|+++..+|+|.. ..++..|++++.
T Consensus 40 ~~~~~~~~~r~~la~~lg~~~~-~~v~~~~~~t~a~~~~~~~l~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~ 118 (371)
T PF00266_consen 40 EFAEILEEAREALAKLLGAPPD-EEVVFTSNGTEALNAVASSLLNPLKPGDEVLVTSNEHPSNRYPWEEIAKRKGAEVRV 118 (371)
T ss_dssp HHHHHHHHHHHHHHHHHTSSTT-EEEEEESSHHHHHHHHHHHHHHHGTTTCEEEEEESSHHHHHHHHHHHHHHTTEEEEE
T ss_pred hhhHHHHHHHHHHHHhcCCccc-cccccccccchhhhhhhhccccccccccccccccccccccccccccccccchhhhcc
Confidence 4567888999999999999862 4589999999999888888743 348899999999999876 445567999999
Q ss_pred EeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCC
Q 011842 211 VDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAP 290 (476)
Q Consensus 211 v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~ 290 (476)
++.+.++.+|+++++++|.++++ +|++++.+|.+|.+.|+++|.++|+++|+ ++++|++++.+..+
T Consensus 119 i~~~~~~~~~~~~~~~~l~~~~~---lv~~~~~~~~tG~~~pi~~I~~~~~~~~~-----~~~vD~~~~~g~~~------ 184 (371)
T PF00266_consen 119 IPADPGGSLDLEDLEEALNPDTR---LVSISHVENSTGVRNPIEEIAKLAHEYGA-----LLVVDAAQSAGCVP------ 184 (371)
T ss_dssp EEEGTTSSCSHHHHHHHHHTTES---EEEEESBETTTTBBSSHHHHHHHHHHTTS-----EEEEE-TTTTTTSS------
T ss_pred ccccccchhhhhhhhhhhccccc---eEEeecccccccEEeeeceehhhhhccCC-----ceeEechhcccccc------
Confidence 99988899999999999987665 99999999999999999999999999999 99999999988777
Q ss_pred CCCCccc-ccEEEEcCCCCCCCCCCceeEEeehhhhhhhcC---CccccC----------CCCCcc-cCCCCChhHHHHH
Q 011842 291 KVSFKKP-IGSVSVSGHKFVGCPMPCGVQITRMEHINVLSS---NVEYLA----------SRDATI-MGSRNGHAPIFLW 355 (476)
Q Consensus 291 ~~~~~~~-~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~---~~~yl~----------~~~~~~-~~sr~~~~~l~~~ 355 (476)
+++.+. +|++++++|| +++|.|+|+++++++.++.+.. ...|.. .....+ .|+.+....+++.
T Consensus 185 -id~~~~~~D~~~~s~~K-l~gp~G~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~ 262 (371)
T PF00266_consen 185 -IDLDELGADFLVFSSHK-LGGPPGLGFLYVRPEAIERLRPAKPGGGYLDFPSLQEYGLADDARRFEGGTPNVPAIYALN 262 (371)
T ss_dssp ---TTTTTESEEEEESTS-TTSSSTEEEEEEEHHHHHHHHTSSSSSSTTTHHHHHHHCHHSTTTGSSSSS--HHHHHHHH
T ss_pred -ccccccccceeeecccc-cCCCCchhhheehhhhhhccccccccccccccccchhcccccccccccccceeeehhhhHH
Confidence 566553 9999999999 7779999999999987665521 111110 011112 3455555556677
Q ss_pred HHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecC-----CeeEEEEecCC--cHHHh-----hceeecc----c
Q 011842 356 YTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNE-----LSSTVVFERPQ--DEEFV-----RRWQLAC----Q 419 (476)
Q Consensus 356 ~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~-----~~~iv~f~~~~--~~~~~-----~~~~l~~----~ 419 (476)
.+++.+...|++++.++..++++++.+.|.+.+...+..+ ..++++|..+. ...+. ++..+.. .
T Consensus 263 ~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~L~~~~I~~~~G~~~~ 342 (371)
T PF00266_consen 263 EALKLLEEIGIERIRERIRELAEYLREALEELPGIEVLGPDDEPRRPSIVSFNLPGSDADDVVKYLEERGIAVSTGSACA 342 (371)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTEEESSSSCGGBGTTEEEEEETTSSHHHHHHHHHHHTEEEEESTTTC
T ss_pred HHHhhhhccccccchhhhhhHHHHHHhhhhcCCceeEeeecccccccceEEEeecCCCHHHHHHHHhhcCEEEeccCccc
Confidence 7888887778999999999999999999999987666432 24677777654 22221 2333322 1
Q ss_pred ---------CCEEEEEEcCCCCHHHHHHH
Q 011842 420 ---------GNIAHVVVMPNVTIDKLDDF 439 (476)
Q Consensus 420 ---------~~~lRv~~~~~~T~edid~~ 439 (476)
++.+|++++.++|++|||+|
T Consensus 343 ~~~~~~~~~~~~iRvS~~~~nt~~dv~~l 371 (371)
T PF00266_consen 343 GPSLDILGMGGVIRVSLHYYNTEEDVDRL 371 (371)
T ss_dssp HHHHHHHHTTTEEEEE-GTTSSHHHHHHH
T ss_pred HHHHHHhCCCCEEEEeccCCCCHHHHhhC
Confidence 37999999999999999986
No 34
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.96 E-value=6.3e-27 Score=237.42 Aligned_cols=294 Identities=14% Similarity=0.122 Sum_probs=220.0
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchH--HHHHHHHcCCeEEEEeC
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYS--VFKAARMYRMECVKVDC 213 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S--~~~~~~~~G~~v~~v~~ 213 (476)
...++.+++++++++++|.+. +...++|+|||+|+..++.+... +++.|+++...|++ +...++..|++++.+|.
T Consensus 29 ~~~~~~~~~~~~la~~~g~~~-~~~~~~~~~~t~al~~~~~~~~~--~g~~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~ 105 (356)
T cd06451 29 EFLALMDEILEGLRYVFQTEN-GLTFLLSGSGTGAMEAALSNLLE--PGDKVLVGVNGVFGDRWADMAERYGADVDVVEK 105 (356)
T ss_pred HHHHHHHHHHHHHHHHhcCCC-CCEEEEecCcHHHHHHHHHHhCC--CCCEEEEecCCchhHHHHHHHHHhCCCeEEeec
Confidence 456778899999999999953 23477899999999988887754 89999999888887 46778889999999999
Q ss_pred CCCCccCHHHHHHHHHc-CCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCC
Q 011842 214 LISGEIDCADFKAKLLQ-NKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKV 292 (476)
Q Consensus 214 ~~~g~~D~~~Le~~l~~-~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~ 292 (476)
++++.+|+++|++.+.+ +++ +|+++++.|++|.+.|+++|.++|+++|+ ++++|++|+.+..+ +
T Consensus 106 ~~~~~~~~~~l~~~i~~~~~~---~v~i~~~~~~~G~~~~~~~i~~~a~~~~~-----~li~D~~~~~g~~~-------~ 170 (356)
T cd06451 106 PWGEAVSPEEIAEALEQHDIK---AVTLTHNETSTGVLNPLEGIGALAKKHDA-----LLIVDAVSSLGGEP-------F 170 (356)
T ss_pred CCCCCCCHHHHHHHHhccCCC---EEEEeccCCCcccccCHHHHHHHHHhcCC-----EEEEeeehhccCcc-------c
Confidence 87789999999999976 443 88888899999999999999999999999 99999998754333 2
Q ss_pred CCcc-cccEEEEcCCCCCCCCCCceeEEeehhhhhhhcC---CccccCC---------CCCcccCCCCChhHHHHHHHHH
Q 011842 293 SFKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSS---NVEYLAS---------RDATIMGSRNGHAPIFLWYTLN 359 (476)
Q Consensus 293 ~~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~---~~~yl~~---------~~~~~~~sr~~~~~l~~~~~l~ 359 (476)
+... .+|+++.++|||+++|.++|++++++++++.+.. ...+... ......++.+......+.++++
T Consensus 171 ~~~~~~~d~~~~s~~K~l~~p~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~aal~ 250 (356)
T cd06451 171 RMDEWGVDVAYTGSQKALGAPPGLGPIAFSERALERIKKKTKPKGFYFDLLLLLKYWGEGYSYPHTPPVNLLYALREALD 250 (356)
T ss_pred cccccCccEEEecCchhccCCCCcceeEECHHHHHHHHhcCCCCceeecHHHHHhhhcccCCCCCCChHHHHHHHHHHHH
Confidence 2222 3799999999999999999999999887665532 1111110 0001122332222345667777
Q ss_pred HhChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCC--eeEE-EEecCC---cHHH----h-h-ceeec-----ccCCE
Q 011842 360 RKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNEL--SSTV-VFERPQ---DEEF----V-R-RWQLA-----CQGNI 422 (476)
Q Consensus 360 ~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~--~~iv-~f~~~~---~~~~----~-~-~~~l~-----~~~~~ 422 (476)
.+...+++++.++..++++++.+.|++.|+....++. .+++ ++..+. ...+ . + ++.+. ..+++
T Consensus 251 ~l~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~gI~~~~g~~~~~~~~ 330 (356)
T cd06451 251 LILEEGLENRWARHRRLAKALREGLEALGLKLLAKPELRSPTVTAVLVPEGVDGDEVVRRLMKRYNIEIAGGLGPTAGKV 330 (356)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCcccCCCceEEEECCCCCCHHHHHHHHHHhCCEEEecccccccCCE
Confidence 7777788999999999999999999998875543322 3343 344442 1222 2 2 33332 13468
Q ss_pred EEEEEcCCCCHHHHHHHHHHHHHHH
Q 011842 423 AHVVVMPNVTIDKLDDFLNELIENR 447 (476)
Q Consensus 423 lRv~~~~~~T~edid~~~~~l~~~~ 447 (476)
+|+++++++|++||++|+++|+++.
T Consensus 331 iRis~~~~~~~e~v~~~~~~l~~~~ 355 (356)
T cd06451 331 FRIGHMGEATREDVLGVLSALEEAL 355 (356)
T ss_pred EEEecCCCCCHHHHHHHHHHHHHHh
Confidence 9999999999999999999998764
No 35
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.96 E-value=9.4e-27 Score=239.70 Aligned_cols=289 Identities=17% Similarity=0.119 Sum_probs=212.0
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHh-hCCCcEEEecCCCchHHH----HHHHHcCCeEEE
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGRE-VFPDGILYASRESHYSVF----KAARMYRMECVK 210 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~-~~p~~~Vl~s~~~H~S~~----~~~~~~G~~v~~ 210 (476)
+..++.+++++.+++++|.+++ ..++++|+|+++...+.+... ..||+.|++++++|+|.. ..++..|++++.
T Consensus 57 ~~~~~~~~l~~~ia~~~~~~~~--~v~~~~~~t~~l~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~ 134 (397)
T TIGR01976 57 RADQVVDDAREAVADLLNADPP--EVVFGANATSLTFLLSRAISRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKW 134 (397)
T ss_pred HHHHHHHHHHHHHHHHcCCCCC--eEEEeCCHHHHHHHHHHHHHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEE
Confidence 3456778899999999999754 488999999998766655422 248899999999998754 556778999999
Q ss_pred EeCCC-CCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccC
Q 011842 211 VDCLI-SGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKA 289 (476)
Q Consensus 211 v~~~~-~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~ 289 (476)
++.++ ++.+|+++|++++.++++ +|++++++|++|.+.|+++|+++|++||+ ++++|++|+.+..+
T Consensus 135 ~~~~~~~~~~~~~~l~~~i~~~~~---lv~i~~~~n~tG~~~~~~~i~~~~~~~~~-----~~ivD~a~~~~~~~----- 201 (397)
T TIGR01976 135 ARVDEATGELHPDDLASLLSPRTR---LVAVTAASNTLGSIVDLAAITELVHAAGA-----LVVVDAVHYAPHGL----- 201 (397)
T ss_pred EeccccCCCcCHHHHHHhcCCCce---EEEEeCCCCCCCccCCHHHHHHHHHHcCC-----EEEEehhhhccccC-----
Confidence 99875 688999999999976554 88899999999999999999999999999 99999998654332
Q ss_pred CCCCCcc-cccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCC-ccccCCCC--CcccCCCCChhHHHHHHHHHHhChhc
Q 011842 290 PKVSFKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSN-VEYLASRD--ATIMGSRNGHAPIFLWYTLNRKGYKG 365 (476)
Q Consensus 290 ~~~~~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~-~~yl~~~~--~~~~~sr~~~~~l~~~~~l~~~g~~g 365 (476)
++..+ .+|+++.++|||++ | ++|+++++++.++.+... ..|..... .--.|+++....+.+..+++.+...|
T Consensus 202 --~~~~~~~~d~~~~s~~K~~g-~-~~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g 277 (397)
T TIGR01976 202 --IDVQATGADFLTCSAYKFFG-P-HMGILWGRPELLMNLPPYKLTFSYDTGPERFELGTPQYELLAGVVAAVDYLAGLG 277 (397)
T ss_pred --CCHHHcCCCEEEEechhhcC-C-ceEEEEEcHHHHhhCCCccccCccCCCcchhcCCCCCHHHHHHHHHHHHHHHHhC
Confidence 33333 38999999999986 3 599999998876655321 12221111 11235666555566777777653332
Q ss_pred --------------HHHHHHHHHHHHHHHHHHHHhcC-CeEeec----CCeeEEEEecCC--cHHHhh-----ceeec--
Q 011842 366 --------------FQKEVQKCLRNAHYLKDRLLDAG-ISAMLN----ELSSTVVFERPQ--DEEFVR-----RWQLA-- 417 (476)
Q Consensus 366 --------------~~~~~~~~~~~a~~l~~~L~~~g-~~~~~~----~~~~iv~f~~~~--~~~~~~-----~~~l~-- 417 (476)
+++..++..++++++++.|++.+ +..+.+ ..++++.|..++ ..++.+ ++.+.
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~ 357 (397)
T TIGR01976 278 ESANGSRRERLVASFQAIDAYENRLAEYLLVGLSDLPGVTLYGVARLAARVPTVSFTVHGLPPQRVVRRLADQGIDAWAG 357 (397)
T ss_pred cccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccCCCceEEEEeCCcCHHHHHHHHHHCCeEEEeC
Confidence 56778888899999999999886 433332 135777776553 233332 22222
Q ss_pred --------------ccCCEEEEEEcCCCCHHHHHHHHHHH
Q 011842 418 --------------CQGNIAHVVVMPNVTIDKLDDFLNEL 443 (476)
Q Consensus 418 --------------~~~~~lRv~~~~~~T~edid~~~~~l 443 (476)
..++++|++++.++|++|||+|+++|
T Consensus 358 ~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l 397 (397)
T TIGR01976 358 HFYAVRLLRRLGLNDEGGVVRVGLAHYNTAEEVDRLLEAL 397 (397)
T ss_pred ccchHHHHHHhCCCCCCCeEEEEeeccCCHHHHHHHHHhC
Confidence 12468999999999999999999875
No 36
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.96 E-value=1.5e-26 Score=238.27 Aligned_cols=300 Identities=13% Similarity=0.087 Sum_probs=229.3
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHH--HHHHHHcCCeEEEEeC
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSV--FKAARMYRMECVKVDC 213 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~--~~~~~~~G~~v~~v~~ 213 (476)
...++.+++++++++++|.+.+ ...+++++||.++..++..... ||+.|++++..|++. ...++..|++++.++.
T Consensus 39 ~~~~~~~~~~~~l~~~~g~~~~-~~vi~~~~gt~a~~~a~~~~~~--~Gd~Vlv~~~~~~~~~~~~~~~~~g~~v~~v~~ 115 (401)
T PLN02409 39 AFPALTKELLEDVKYIFKTKSG-TPFIFPTTGTGAWESALTNTLS--PGDKVVSFRIGQFSLLWIDQMQRLNFDVDVVES 115 (401)
T ss_pred HHHHHHHHHHHHHHHHhCCCCC-CEEEEeCCcHHHHHHHHHhcCC--CCCEEEEeCCCchhHHHHHHHHHcCCceEEEEC
Confidence 5568899999999999999743 3578889999998887766544 899999999999775 5777888999999998
Q ss_pred CCCCccCHHHHHHHHHcCC-CCcEEEEEeeCCCccccccCHHHHHHH--HHHhCCCCCceEEEEecCcccccccccccCC
Q 011842 214 LISGEIDCADFKAKLLQNK-DKPAIINVNIGTTVKGAVDDLDLVIQT--LEESGFTQDRFYIHCDGALFGLMMPFVKKAP 290 (476)
Q Consensus 214 ~~~g~~D~~~Le~~l~~~~-~~p~~vv~t~gtt~tG~id~l~~I~~i--a~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~ 290 (476)
+.++.+|+++|++++++++ .++.+|++++++|+||.+.|+++|.++ |+++|+ +++||++++.+..+
T Consensus 116 ~~~~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~~~~i~~l~~~~~~g~-----~~vvD~v~s~g~~~------ 184 (401)
T PLN02409 116 PWGQGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTNDLAGVRKLLDCAQHPA-----LLLVDGVSSIGALD------ 184 (401)
T ss_pred CCCCCCCHHHHHHHHhhCcCCCccEEEEEeecccccccCCHHHHHHHHhhhccCc-----EEEEEcccccCCcc------
Confidence 8666789999999998732 234588899999999999999999999 999999 99999999865555
Q ss_pred CCCCcc-cccEEEEcCCCCCCCCCCceeEEeehhhhhhhcC---CccccCC-------CCCcc-cCCCCChhHHHHHHHH
Q 011842 291 KVSFKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSS---NVEYLAS-------RDATI-MGSRNGHAPIFLWYTL 358 (476)
Q Consensus 291 ~~~~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~---~~~yl~~-------~~~~~-~~sr~~~~~l~~~~~l 358 (476)
++..+ ++|++++++|||+++|.|+|+++++++.++.+.. ...|+.- ...+. .++.+....+++..++
T Consensus 185 -id~~~~~~D~~~~s~~K~l~~P~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~Tp~~~~~~al~~al 263 (401)
T PLN02409 185 -FRMDEWGVDVALTGSQKALSLPTGLGIVCASPKALEASKTAKSPRVFFDWADYLKFYKLGTYWPYTPSIQLLYGLRAAL 263 (401)
T ss_pred -ccccccCccEEEEcCccccCcCCCcceeEECHHHHHHHhcCCCCCeecCHHHHHHHHhcCCCCCCCccHHHHHHHHHHH
Confidence 45544 4899999999999999999999999887665532 1122210 00011 2344433445666777
Q ss_pred HHhChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecC-C--e-eEEEEecCC---cHHHh----hcee--ec-----ccC
Q 011842 359 NRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNE-L--S-STVVFERPQ---DEEFV----RRWQ--LA-----CQG 420 (476)
Q Consensus 359 ~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~-~--~-~iv~f~~~~---~~~~~----~~~~--l~-----~~~ 420 (476)
+.+...|++++.++..++++++++.|++.|+..+.++ . + .+++|..|. ...+. +++. +. ..+
T Consensus 264 ~~~~~~G~e~i~~~~~~l~~~l~~~L~~~g~~~~~~~~~~~s~~v~~~~~p~~~~~~~l~~~l~~~~~i~i~~G~~~~~~ 343 (401)
T PLN02409 264 DLIFEEGLENVIARHARLGEATRLAVEAWGLKLCTKKPEWRSDTVTAVVVPEGIDSAEIVKNAWKKYNLSLGLGLNKVAG 343 (401)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCChhhcccceEEEeCCCCCCHHHHHHHHHHhCCEEEEcCCCcccC
Confidence 7777789999999999999999999999987665432 2 3 345566553 12232 2322 22 246
Q ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 011842 421 NIAHVVVMPNVTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 421 ~~lRv~~~~~~T~edid~~~~~l~~~~~~~ 450 (476)
..+||+.+.++|.+||..++++|.++.+.+
T Consensus 344 ~~~Rig~~g~~~~~~~~~~~~~~~~~l~~~ 373 (401)
T PLN02409 344 KVFRIGHLGNVNELQLLGALAGVEMVLKDV 373 (401)
T ss_pred CEEEEcCCCCCCHHHHHHHHHHHHHHHHHc
Confidence 789999999999999999999999987654
No 37
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.96 E-value=2.7e-26 Score=234.13 Aligned_cols=290 Identities=16% Similarity=0.179 Sum_probs=209.2
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCC--CC
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCL--IS 216 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~--~~ 216 (476)
....++++.+++++|.+. ..+++|+++++..++.+... +++.|+++...|+|...+++..|++++.+|++ ++
T Consensus 51 ~~~~~~~e~lA~~~g~~~----~~i~~g~~~a~~~~~~~l~~--~gd~Vl~~~~~h~s~~~~~~~~g~~~~~~~~~~~~~ 124 (370)
T TIGR02539 51 PPIHDFLEDLAEFLGMDE----ARVTHGAREGKFAVMHALCK--EGDWVVLDGLAHYTSYVAAERAGLNVKEVPHTGHPE 124 (370)
T ss_pred hHHHHHHHHHHHHhCCCc----eEEECChHHHHHHHHHHhhC--CCCEEEECCcccHHHHHHHHHcCCEEEEEecCCccc
Confidence 344455667999999974 67899999999988887765 89999999999999999999999999999986 35
Q ss_pred CccCHHHHHHHHHcCC----CCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCC
Q 011842 217 GEIDCADFKAKLLQNK----DKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKV 292 (476)
Q Consensus 217 g~~D~~~Le~~l~~~~----~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~ 292 (476)
+.+|+++|+++|.+.+ ..+.+|+++++++++|.+.|+++|+++|++||+ ++++|+||+.+.++ .
T Consensus 125 ~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~l~~i~~la~~~~~-----~livDea~~~g~~~-------~ 192 (370)
T TIGR02539 125 YKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPDAGKVAKVCREKGV-----PLLLNCAYTVGRMP-------V 192 (370)
T ss_pred CCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccCHHHHHHHHHHcCC-----eEEEECccccCCcC-------C
Confidence 7899999999997521 234588888999999999999999999999999 99999999865433 1
Q ss_pred CCcc-cccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCC-cccCCCCChhHHHHHHHHHHhChhcHHHHH
Q 011842 293 SFKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDA-TIMGSRNGHAPIFLWYTLNRKGYKGFQKEV 370 (476)
Q Consensus 293 ~~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~-~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~ 370 (476)
++.. .+|+++.++|||++.+.++|++++++++++.+.....|..-... .+.++.....+..+++++... .+.+ +..
T Consensus 193 ~~~~~~~di~v~s~sK~~~~~g~~G~l~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~-~~~l-~~~ 270 (370)
T TIGR02539 193 SAKEIGADFIVGSGHKSMAASGPCGVLGMSEEWEDIVLRKSRYSPVKEVELLGCTSRGAPIVTMMASFPHV-VERV-KRW 270 (370)
T ss_pred CHHHcCCCEEEeeCcccccCCCCEEEEEECHHHHhhhcccccCCccceeeeecccccccHHHHHHHHHHHH-HHHH-HHH
Confidence 2222 37999999999999888899999998887766443332211111 122233223344455555432 1222 233
Q ss_pred HHHHHHHHHHHHHHHhcCCeEe--ecCCeeEEEEecCCc-----------HHHh-----hcee-ecc-cCCEEEEEEcCC
Q 011842 371 QKCLRNAHYLKDRLLDAGISAM--LNELSSTVVFERPQD-----------EEFV-----RRWQ-LAC-QGNIAHVVVMPN 430 (476)
Q Consensus 371 ~~~~~~a~~l~~~L~~~g~~~~--~~~~~~iv~f~~~~~-----------~~~~-----~~~~-l~~-~~~~lRv~~~~~ 430 (476)
.+..+++++|++.|++.|+..+ .+..++++++..+.. ..+. +++. +.. ..+++|++++ .
T Consensus 271 ~~~~~~~~~l~~~L~~~g~~~~~~~~s~t~~v~~~~~~~~~~~~~~~~~~~~~~~~L~e~GI~~ir~~~~~~iRis~~-~ 349 (370)
T TIGR02539 271 DEEVKKTRWFVAELEDIGFIQLGQKPKEHDLVKFETPGFHEIAQKHKRRGYFLYEELKKRGIHGIRSGQTKYFKLSVY-G 349 (370)
T ss_pred HHHHHHHHHHHHHHHhCCcEEEccCCCcCceEEEECCchhHHhhhhccccHHHHHHHHhCCCccccCCcceEEEEEec-C
Confidence 4456667899999999997653 245678888876521 1122 1222 211 2358999985 6
Q ss_pred CCHHHHHHHHHHHHHHHHH
Q 011842 431 VTIDKLDDFLNELIENRST 449 (476)
Q Consensus 431 ~T~edid~~~~~l~~~~~~ 449 (476)
.|++|+++++++|+++.++
T Consensus 350 ~t~e~i~~l~~~L~~~~~~ 368 (370)
T TIGR02539 350 LTKEQVEYVVDSFEEIVEE 368 (370)
T ss_pred CCHHHHHHHHHHHHHHHHh
Confidence 7999999999999987654
No 38
>PRK14012 cysteine desulfurase; Provisional
Probab=99.96 E-value=3.4e-26 Score=236.16 Aligned_cols=291 Identities=15% Similarity=0.135 Sum_probs=209.8
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHh--hCCCcEEEecCCCchHHHHHHHH---cCCeEEEEeC
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGRE--VFPDGILYASRESHYSVFKAARM---YRMECVKVDC 213 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~--~~p~~~Vl~s~~~H~S~~~~~~~---~G~~v~~v~~ 213 (476)
+..+++++++++++|.+++ .+++|+|+|+|+.+++.++.. ..+++.|+++..+|+++...++. .|++++.++.
T Consensus 49 ~~~~~~r~~ia~~~g~~~~--~v~~~~g~t~al~~~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~ 126 (404)
T PRK14012 49 EAVDIARNQIADLIGADPR--EIVFTSGATESDNLAIKGAAHFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLDP 126 (404)
T ss_pred HHHHHHHHHHHHHcCcCcC--eEEEeCCHHHHHHHHHHHHHHhhcCCCCEEEEecCccHHHHHHHHHHHhCCCEEEEEcc
Confidence 4556778899999999754 489999999999998877652 24789999999999998665544 4999999999
Q ss_pred CCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCC
Q 011842 214 LISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVS 293 (476)
Q Consensus 214 ~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~ 293 (476)
+++|.+|+++|+++|.++++ +|++++.++++|.+.|+++|.++|+++|+ ++|+|++|+.+..+ ++
T Consensus 127 ~~~g~~d~~~l~~~i~~~t~---lv~~~~~~n~tG~~~~~~~I~~la~~~g~-----~vivD~a~~~g~~~-------~~ 191 (404)
T PRK14012 127 QSNGIIDLEKLEAAMRDDTI---LVSIMHVNNEIGVIQDIAAIGEICRERGI-----IFHVDAAQSVGKVP-------ID 191 (404)
T ss_pred CCCCcCCHHHHHHhcCCCCE---EEEEECcCCCccchhhHHHHHHHHHHcCC-----EEEEEcchhcCCcc-------cC
Confidence 88899999999999987664 88899999999999999999999999999 99999999876554 23
Q ss_pred Ccc-cccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCC-CCcc-cCCCCChhHHHHHHHHHHhChhcHHHHH
Q 011842 294 FKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASR-DATI-MGSRNGHAPIFLWYTLNRKGYKGFQKEV 370 (476)
Q Consensus 294 ~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~-~~~~-~~sr~~~~~l~~~~~l~~~g~~g~~~~~ 370 (476)
+.. .+|++++++||+++ |.++|+++++++....+. +.+.... ...+ .++.+....+.+.+++... ..+..+..
T Consensus 192 ~~~~~~D~~~~s~~K~~g-p~g~G~l~~~~~~~~~~~--~~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~-~~~~~~~~ 267 (404)
T PRK14012 192 LSKLKVDLMSFSAHKIYG-PKGIGALYVRRKPRVRLE--AQMHGGGHERGMRSGTLPTHQIVGMGEAARIA-KEEMATEN 267 (404)
T ss_pred cccCCCCEEEEehhhccC-CCceEEEEEecCCCCCCC--ceecCCCccCCccCCCcCHHHHHHHHHHHHHH-HhhHHHHH
Confidence 333 38999999999665 789999999976432221 1111111 0111 2333333333444455443 23566678
Q ss_pred HHHHHHHHHHHHHHHhcCCeEeecC------CeeEEEEecCCcHHHhh---ceeec----c-------------------
Q 011842 371 QKCLRNAHYLKDRLLDAGISAMLNE------LSSTVVFERPQDEEFVR---RWQLA----C------------------- 418 (476)
Q Consensus 371 ~~~~~~a~~l~~~L~~~g~~~~~~~------~~~iv~f~~~~~~~~~~---~~~l~----~------------------- 418 (476)
++..++++++.+.|++.+...+.++ ....+.|...+.+.+.. +..+. |
T Consensus 268 ~~~~~l~~~l~~~L~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~ 347 (404)
T PRK14012 268 ERIRALRDRLWNGIKDIEEVYLNGDLEQRVPGNLNVSFNYVEGESLIMALKDLAVSSGSACTSASLEPSYVLRALGLNDE 347 (404)
T ss_pred HHHHHHHHHHHHHHhcCCCEEEeCCccccCCCEEEEEEeCcCHHHHHHhCCCeEEEchhhhCCCCCCCCHHHHHcCCChh
Confidence 8889999999999988653333211 12245555433233322 21110 0
Q ss_pred -cCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 011842 419 -QGNIAHVVVMPNVTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 419 -~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~ 450 (476)
..+.+|+++++++|++|||+++++|+++.+.+
T Consensus 348 ~~~~~iRls~~~~~t~~dvd~~~~~l~~~~~~~ 380 (404)
T PRK14012 348 LAHSSIRFSLGRFTTEEEIDYAIELVRKSIGKL 380 (404)
T ss_pred hcCceEEEEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 13678999999999999999999999988765
No 39
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.96 E-value=1.4e-26 Score=236.57 Aligned_cols=292 Identities=14% Similarity=0.093 Sum_probs=219.3
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCccc-EEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCC
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYW-GYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCL 214 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~-g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~ 214 (476)
+..++++++.+++.+..|++.+... +++|+|+++|++.++.+..+ |||+|+++++.|.++....+++|++++.++++
T Consensus 66 G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al~~~~~a~~~--pGDeVlip~P~Y~~y~~~~~~~gg~~v~v~l~ 143 (393)
T COG0436 66 GIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEALFLAFLALLN--PGDEVLIPDPGYPSYEAAVKLAGGKPVPVPLD 143 (393)
T ss_pred CCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHHHHHHHHhcC--CCCEEEEeCCCCcCHHHHHHhcCCEEEEEeCC
Confidence 4569999999999999997654444 99999999999999999988 99999999999999999999999999999975
Q ss_pred ---CCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCccccccccccc
Q 011842 215 ---ISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKK 288 (476)
Q Consensus 215 ---~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~ 288 (476)
.++.+|++.|+++++++++ +|++|+|+|+||++.+ +++|+++|++||+ ||++|++|..+.+....+
T Consensus 144 ~~~~~f~~d~~~l~~~i~~ktk---~i~ln~P~NPTGav~~~~~l~~i~~~a~~~~i-----~ii~DEiY~~l~yd~~~~ 215 (393)
T COG0436 144 EEENGFKPDLEDLEAAITPKTK---AIILNSPNNPTGAVYSKEELKAIVELAREHDI-----IIISDEIYEELVYDGAEH 215 (393)
T ss_pred cCccCCcCCHHHHHhhcCccce---EEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCe-----EEEEehhhhhcccCCCCc
Confidence 3789999999999998776 9999999999999954 8999999999999 999999999988865434
Q ss_pred CCCCCCcc---cccEEEEcCCCCCCCCCCceeEEee-hhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhCh-
Q 011842 289 APKVSFKK---PIGSVSVSGHKFVGCPMPCGVQITR-MEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGY- 363 (476)
Q Consensus 289 ~~~~~~~~---~~Dsi~~s~hK~l~~p~~~G~l~~~-~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~- 363 (476)
.+.+.... .+-++.+-++-+.+++|++||++++ .++++.+....+|+..+ ...+.|.++..++..
T Consensus 216 ~s~~~~~~~~~~~i~i~s~SK~~~mtGwRvG~~v~~~~~l~~~~~~~~~~~~~~----------~~~~~Q~aa~~aL~~~ 285 (393)
T COG0436 216 PSILELAGARDRTITINSFSKTYGMTGWRIGWVVGPPEELIAALRKLKSYLTSC----------APTPAQYAAIAALNGP 285 (393)
T ss_pred CCHhhcCCCcceEEEEecccccccccccceeEeecChHHHHHHHHHHHHhcccC----------CCHHHHHHHHHHhcCc
Confidence 43333332 2333333344466799999999999 55665554334443221 234666666666642
Q ss_pred ---hcHHHHHHHHHHHHHHHHHHHHhcC-CeEeecC-CeeEEEEecCC---cHHHhh----ceee---c-------ccCC
Q 011842 364 ---KGFQKEVQKCLRNAHYLKDRLLDAG-ISAMLNE-LSSTVVFERPQ---DEEFVR----RWQL---A-------CQGN 421 (476)
Q Consensus 364 ---~g~~~~~~~~~~~a~~l~~~L~~~g-~~~~~~~-~~~iv~f~~~~---~~~~~~----~~~l---~-------~~~~ 421 (476)
...+...+...++++.+.+.|.+.+ +....+| ++..++...+. +.+|.. +..| | ...+
T Consensus 286 ~~~~~~~~~~~~~~~rrd~l~~~l~~~~g~~~~~~p~Ga~Y~~~~i~~~~d~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~ 365 (393)
T COG0436 286 QSDEVVEEMREEYRERRDLLVEALNEIGGLSVVKPPEGAFYLFPKIPELLDSEEFAKKLLEEAGVAVVPGSGFGEPPGEG 365 (393)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccCCCeeEEEEeecCCCCCHHHHHHHHHHhCCEEEecccccCCCCCCC
Confidence 2456666788899999999999886 5555535 55666666653 234433 2222 1 1236
Q ss_pred EEEEEEcCCCCHHHHHHHHHHHHHHHHH
Q 011842 422 IAHVVVMPNVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 422 ~lRv~~~~~~T~edid~~~~~l~~~~~~ 449 (476)
.+|++.. .+.++++..++.|.+..+.
T Consensus 366 ~vRis~~--~~~~~l~~a~~rl~~~~~~ 391 (393)
T COG0436 366 YVRLSLA--TSEETLEEALRRLARFLAE 391 (393)
T ss_pred eEEEEEe--cCHHHHHHHHHHHHHHHHh
Confidence 8998875 4448888888888877654
No 40
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.96 E-value=1e-26 Score=230.32 Aligned_cols=292 Identities=14% Similarity=0.103 Sum_probs=206.1
Q ss_pred hHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCc----EEEecCCCchHHHHHHHHc---CCeEE
Q 011842 137 SRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDG----ILYASRESHYSVFKAARMY---RMECV 209 (476)
Q Consensus 137 ~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~----~Vl~s~~~H~S~~~~~~~~---G~~v~ 209 (476)
....-++.++.+|+|+|+++++ ++||+|+|+||.++++.... ++++ .|++.+.+|.++...++.+ |++++
T Consensus 83 ~~~~~E~aR~~VAklInAd~~d--IiFts~ATEs~Nlvl~~v~~-~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt 159 (428)
T KOG1549|consen 83 AEDAVEAAREQVAKLINADPSD--IVFTSGATESNNLVLKGVAR-FFGDKTKKHIITLQTEHPCVLDSCRALQEEGLEVT 159 (428)
T ss_pred hhHHHHHHHHHHHHHhCCCCCc--EEEeCCchHHHHHHHHHhhc-cccccccceEEEecccCcchhHHHHHHHhcCeEEE
Confidence 3444557889999999999765 99999999999999887543 2444 8999999999999888877 89999
Q ss_pred EEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccC
Q 011842 210 KVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKA 289 (476)
Q Consensus 210 ~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~ 289 (476)
.+|++.+|..|.+.|++.|+++|+ +|.+.+.+++.|.+.|++||.++|+++|+ .+|+|+||+.+..+
T Consensus 160 ~lpv~~~~~~d~~~~~~~i~~~T~---lv~I~~Vnn~~gv~~Pv~EI~~icr~~~v-----~v~~DaAQavG~i~----- 226 (428)
T KOG1549|consen 160 YLPVEDSGLVDISKLREAIRSKTR---LVSIMHVNNEIGVLQPVKEIVKICREEGV-----QVHVDAAQAVGKIP----- 226 (428)
T ss_pred EeccCccccccHHHHHHhcCCCce---EEEEEecccCccccccHHHHHHHhCcCCc-----EEEeehhhhcCCcc-----
Confidence 999998899999999999999887 89999999999999999999999999999 99999999988887
Q ss_pred CCCCCccc-ccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCC-Cc-ccCCCCChhHHHHHHHHHHhCh--h
Q 011842 290 PKVSFKKP-IGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRD-AT-IMGSRNGHAPIFLWYTLNRKGY--K 364 (476)
Q Consensus 290 ~~~~~~~~-~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~-~~-~~~sr~~~~~l~~~~~l~~~g~--~ 364 (476)
+|+.+. +|++++++|||+++|. +|+||+|.. ...+...+.+.++.. .. -.|++.-..++.+-.+.+.... .
T Consensus 227 --vDV~eln~D~~s~s~HK~ygp~~-iGaLYvr~~-~~~~~~~p~~~GGgq~r~~rsGT~~~~~~~~~gsA~e~~~~~~~ 302 (428)
T KOG1549|consen 227 --VDVQELNADFLSISAHKIYGPPG-IGALYVRRK-RPRLRVEPPLSGGGQERGLRSGTVATPLAVGLGSAAEFVNKEMA 302 (428)
T ss_pred --ccHHHcCchheeeecccccCCCc-ceEEEEccC-CCcccccCcccCCccccccccCCcCchhhhhhHHHHHHHHhhcc
Confidence 788775 9999999999999555 999999972 112233344544321 11 2344443344444455544421 2
Q ss_pred cHHHHHHHHHHHHHHHHHHHHh-cCCeEeec-CC---eeEEEEecC--CcHHH----------------hhc--ee--e-
Q 011842 365 GFQKEVQKCLRNAHYLKDRLLD-AGISAMLN-EL---SSTVVFERP--QDEEF----------------VRR--WQ--L- 416 (476)
Q Consensus 365 g~~~~~~~~~~~a~~l~~~L~~-~g~~~~~~-~~---~~iv~f~~~--~~~~~----------------~~~--~~--l- 416 (476)
....++.+ +-..+...+.. .....+.. +. .+.+.|..+ .+... .+. +. +
T Consensus 303 ~~~~~~~~---~~~~ll~~i~~~~~~~~~~G~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~s~~a~~~~~~epsy~l~ 379 (428)
T KOG1549|consen 303 YDEAIIKR---LSEKLLMGIGQSLPEVTLNGSGKSRYPGLVSLSFPYVEGESLLMDLKDVALSSGSACTSASLEPSYVLR 379 (428)
T ss_pred hhHHHHHH---HHHHHHHHHhhhCchhhccCCcccccccceeeecccccCcchhhhhhhhhhcccchhhcCCCCcchhhh
Confidence 23333333 33444444433 22222211 11 133333332 11100 000 00 0
Q ss_pred ------cccCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 011842 417 ------ACQGNIAHVVVMPNVTIDKLDDFLNELIENRSTWY 451 (476)
Q Consensus 417 ------~~~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~ 451 (476)
..-...+|+++..++|++|++++++.+++..+.+.
T Consensus 380 ~~G~~~~~~~~~iRis~G~y~t~~di~~~~~~i~~~v~~~~ 420 (428)
T KOG1549|consen 380 AIGVDEDLAHSSIRISIGRYTTEEDIDYLVDAIKKLVSLLR 420 (428)
T ss_pred hcCcchhhhcceeEEeeeeeCcHHHHHHHHHHHHHHHHhcc
Confidence 01136799999999999999999999999887665
No 41
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.96 E-value=4.6e-26 Score=248.51 Aligned_cols=357 Identities=17% Similarity=0.193 Sum_probs=250.6
Q ss_pred cHHHHHHHHHHHHhcccc---cccCCCCcCCcchHHHHHHHHHhhCCCCC--CcccCccchhhHHHHHHHHHHHHHHcCC
Q 011842 80 YMAGVLARYRKTLMERTK---HHLGYPYNLDFDYGALAQLQHFSINNLGD--PFIESNYGVHSRQFEVGVLDWFARLWEL 154 (476)
Q Consensus 80 ~~~~il~~~~~~~~~~~~---~~~g~p~~~~~~~~~l~~~l~~~~n~~g~--~~~~~~~~~~~~~le~~~~~~la~l~g~ 154 (476)
+-.+++..++++...+.. .++|--... ..+..+.+++....+.+.. ++.......+..+++.++.+|+++++|+
T Consensus 467 sE~e~~r~~~~L~~kn~~~~~~fi~lGsct-mk~na~v~~l~~s~~ef~t~hPyqPe~~sqG~lq~i~elq~~l~eltGm 545 (939)
T TIGR00461 467 SETEMLRYLHRLESKDLALNNSMIPLGSCT-MKLNATAEMMPITWPEFSNIHPFQPSNQVEGYQELIAQLEKWLCSITGF 545 (939)
T ss_pred CHHHHHHHHHHHHhcCCCccccCCCCccCC-CccCHHHHHHHhcchhhcCcCCCCchHHhHHHHHHHHHHHHHHHHHHCC
Confidence 445777777776555422 122211111 1234555555444443322 2221112335779999999999999999
Q ss_pred CCCcccEEEcCCchhHHHHHHHHHHhh------CCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccCHHHHHHHH
Q 011842 155 ENNEYWGYITNCGTEGNLHGILVGREV------FPDGILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCADFKAKL 228 (476)
Q Consensus 155 ~~~~~~g~~t~ggt~An~~al~aa~~~------~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~~~Le~~l 228 (476)
+. .++..++|++|++++++++|.+ ..+.+|+++...|.+..+.+++.|++++.||++++|.+|+++|++++
T Consensus 546 d~---~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPasa~~~G~~Vv~V~~d~~G~iDle~L~~~i 622 (939)
T TIGR00461 546 DA---ISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPASAAMAGMQVVPVNCDQDGNIDLVDLKNKA 622 (939)
T ss_pred CC---cccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHHHHHHCCCEEEEeccCCCCCcCHHHHHHHH
Confidence 84 3788899999999988888762 24578999999999998889999999999999999999999999999
Q ss_pred HcCCCCcEEEEEeeCCCccccccC-HHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCcccccEEEEcCCC
Q 011842 229 LQNKDKPAIINVNIGTTVKGAVDD-LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKPIGSVSVSGHK 307 (476)
Q Consensus 229 ~~~~~~p~~vv~t~gtt~tG~id~-l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~~Dsi~~s~hK 307 (476)
+++..++.+|++++++| +|.++| +++|+++|+++|. ++++|+|+......... ....++|++++|.||
T Consensus 623 ~~~~~~taaV~iT~pst-~G~~e~~I~eI~~iah~~G~-----~v~VDgAq~~al~~l~~-----Pg~~GaDi~~~s~HK 691 (939)
T TIGR00461 623 EQHGDELAAVMVTYPST-HGVFEPTIQHACDIVHSFGG-----QVYLDGANMNAQVGLTS-----PGDLGADVCHLNLHK 691 (939)
T ss_pred hhcCCceEEEEEEeCCc-CceecccHHHHHHHHHHcCC-----EEEEEecChhhCCCCCC-----ccccCCCEEEecCCc
Confidence 87545667999999998 699977 9999999999999 99999999543222111 122349999999999
Q ss_pred CCCCCCC-----ceeEEeehhhhhhhcCCcc---c-cCCCC----Ccc-cCCCCChhHHHHHHHHHHhChhcHHHHHHHH
Q 011842 308 FVGCPMP-----CGVQITRMEHINVLSSNVE---Y-LASRD----ATI-MGSRNGHAPIFLWYTLNRKGYKGFQKEVQKC 373 (476)
Q Consensus 308 ~l~~p~~-----~G~l~~~~~~~~~l~~~~~---y-l~~~~----~~~-~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~ 373 (476)
+++.|.+ +|++++++++...++...- + ..+.. .+. .++++...++..|+.++.+|.+|+++..+..
T Consensus 692 tf~~P~G~GGPg~G~i~vr~~L~~~lPg~~v~~t~d~~greq~Iga~s~~~~g~a~~~l~a~~yi~~lG~~GL~~~a~~a 771 (939)
T TIGR00461 692 TFCIPHGGGGPGMGPIGVKSHLIPFLPKHDVVSMITGIGGSKSIGSVSAAPYGSASILPISWMYIKMMGNEGLPKASVVA 771 (939)
T ss_pred cCCCCCCCCCCCeEEEEEhhhchhhcCCCcccccccCCCCccccccccccccCcHHHHHHHHHHHHHHCHHHHHHHHHHH
Confidence 9995554 5999999876544432110 0 00000 011 2344445568899999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCeEeecC----CeeEEEEecCC--------cHHHhh-----ceeecc----cCCEEEEEEcCCCC
Q 011842 374 LRNAHYLKDRLLDAGISAMLNE----LSSTVVFERPQ--------DEEFVR-----RWQLAC----QGNIAHVVVMPNVT 432 (476)
Q Consensus 374 ~~~a~~l~~~L~~~g~~~~~~~----~~~iv~f~~~~--------~~~~~~-----~~~l~~----~~~~lRv~~~~~~T 432 (476)
..+|+|+.++|++ ++..+.+. ..+-++|+.+. ..++.+ ++.-+. ..+.+-+.++..+|
T Consensus 772 ilnAnYl~~rL~~-~~~~l~~~~~~~~~hEfv~~~~~~~~~~g~~~~dIakrL~d~G~hapt~~~pv~g~lmiepTE~es 850 (939)
T TIGR00461 772 ILNANYMATRLKD-HYPILFVGTLKHVAHECILDLRPLKAKTGIEAIDVAKRLQDYGFHAPTLSFPVPGTLMVEPTESES 850 (939)
T ss_pred HHHHHHHHHHhhc-cCcccccCCCCceeEEEEEeccchhhhcCCCHHHHHHHHHhCCeeccccCCccCCeEEEEeeccCC
Confidence 9999999999987 44433332 12345555542 122222 222221 12366777888999
Q ss_pred HHHHHHHHHHHHHHHHHHHh
Q 011842 433 IDKLDDFLNELIENRSTWYE 452 (476)
Q Consensus 433 ~edid~~~~~l~~~~~~~~~ 452 (476)
++|||+|+++|.++.+++.+
T Consensus 851 keelD~f~~al~~I~~e~~~ 870 (939)
T TIGR00461 851 LEELDRFCDAMIAIKEEINA 870 (939)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998876
No 42
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.96 E-value=8.9e-27 Score=233.87 Aligned_cols=325 Identities=15% Similarity=0.104 Sum_probs=229.3
Q ss_pred HHHHHhcccccccCCCCcCCcchHHHHHHHHHhhCCCCCCcccCccchhhHHHHHHHHHHHHHHcCCCCCcccEEEcCCc
Q 011842 88 YRKTLMERTKHHLGYPYNLDFDYGALAQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELENNEYWGYITNCG 167 (476)
Q Consensus 88 ~~~~~~~~~~~~~g~p~~~~~~~~~l~~~l~~~~n~~g~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~g~~t~gg 167 (476)
-++.++..+++|+| +...+.....+. ..+...|.+...++.-.+...+..++.+.+++++|.+. .++.++|
T Consensus 38 ~~~~~nf~SNdYLG----La~~~~~~~a~~-~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~g~e~----al~f~SG 108 (388)
T COG0156 38 GRKVLNFCSNDYLG----LASHPELIEAAK-AAIRRYGVGAGGSRLISGTSDLHVELEEELADFLGAEA----ALLFSSG 108 (388)
T ss_pred CceeEeeeccCccc----ccCCHHHHHHHH-HHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHhCCCc----EEEEccc
Confidence 45567888999999 444423222222 22222222222333333456788888888999999985 7888999
Q ss_pred hhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccCHHHHHHHHHcC---CCCcEEEEEeeCC
Q 011842 168 TEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCADFKAKLLQN---KDKPAIINVNIGT 244 (476)
Q Consensus 168 t~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~~~Le~~l~~~---~~~p~~vv~t~gt 244 (476)
..||+..+.+... +++.|+.++..|.|+.+++++.+++++.++++ |+++||+.|++. ..++.+|++....
T Consensus 109 y~AN~~~i~~l~~--~~dli~~D~lnHASiidG~rls~a~~~~f~Hn-----D~~~Le~~l~~~~~~~~~~~~IvtegVf 181 (388)
T COG0156 109 FVANLGLLSALLK--KGDLIFSDELNHASIIDGIRLSRAEVRRFKHN-----DLDHLEALLEEARENGARRKLIVTEGVF 181 (388)
T ss_pred chhHHHHHHHhcC--CCcEEEEechhhhhHHHHHHhCCCcEEEecCC-----CHHHHHHHHHhhhccCCCceEEEEeccc
Confidence 9999999988877 79999999999999999999999999999987 999999999873 1134567666779
Q ss_pred CccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccc-cccccCCCCCCcc-c-ccEEEEcCCCCCCCCCCceeEEee
Q 011842 245 TVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMM-PFVKKAPKVSFKK-P-IGSVSVSGHKFVGCPMPCGVQITR 321 (476)
Q Consensus 245 t~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~-~~~~~~~~~~~~~-~-~Dsi~~s~hK~l~~p~~~G~l~~~ 321 (476)
+|.|.+.||++|++++++|++ |++||+||+.+++ +..++.....+.. . +|+++.++.|.+++ ..|++..+
T Consensus 182 SMdGdiApL~~l~~L~~ky~a-----~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlGs--~Gg~v~g~ 254 (388)
T COG0156 182 SMDGDIAPLPELVELAEKYGA-----LLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALGS--SGGYIAGS 254 (388)
T ss_pred cCCCCcCCHHHHHHHHHHhCc-----EEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhhcc--cCceeeCc
Confidence 999999999999999999999 9999999996554 3444432122222 3 79999999999994 23444444
Q ss_pred hhhhhhhcC-CccccCCCCCcccCCCCChhHHH--HHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCee
Q 011842 322 MEHINVLSS-NVEYLASRDATIMGSRNGHAPIF--LWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSS 398 (476)
Q Consensus 322 ~~~~~~l~~-~~~yl~~~~~~~~~sr~~~~~l~--~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~ 398 (476)
..+.+.+.. ...|+++. ...++.. ...+++.+ +...++.+++.++..++++.++..++.. .+..++
T Consensus 255 ~~~~d~L~~~ar~~ifSt--------alpP~~aaa~~~al~~l--~~~~~~r~~L~~~~~~~~~~~~~~~~~~-~~s~s~ 323 (388)
T COG0156 255 AALIDYLRNRARPFIFST--------ALPPAVAAAALAALRIL--EEGPERRERLQELAAFFRSLLKALGLVL-LPSESP 323 (388)
T ss_pred HHHHHHHHHhCCceeccC--------CCCHHHHHHHHHHHHHH--HhCHHHHHHHHHHHHHHHHHHHhcCCcc-CCCCCC
Confidence 545554432 34555443 2222222 22334433 3457788999999999998777777643 456677
Q ss_pred EEEEecCCcH---HH-----hhcee--------ecccCCEEEEEEcCCCCHHHHHHHHHHHHHH
Q 011842 399 TVVFERPQDE---EF-----VRRWQ--------LACQGNIAHVVVMPNVTIDKLDDFLNELIEN 446 (476)
Q Consensus 399 iv~f~~~~~~---~~-----~~~~~--------l~~~~~~lRv~~~~~~T~edid~~~~~l~~~ 446 (476)
|+.+...+.. ++ .+++. +|....++|++++..+|++||++++++|.++
T Consensus 324 I~pv~~gd~~~a~~~s~~l~~~Gi~v~~i~~PTVp~gtarlRi~lta~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 324 IIPVILGDEERALEASRALLEEGIYVSAIRPPTVPKGTARLRITLTAAHTEEDIDRLAEALSEV 387 (388)
T ss_pred eeeeEeCCHHHHHHHHHHHHHCCeeEeeecCCCCCCCcceEEEEecCCCCHHHHHHHHHHHHhh
Confidence 8877766532 11 12333 2345678999999999999999999999764
No 43
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.95 E-value=8.8e-26 Score=250.39 Aligned_cols=352 Identities=16% Similarity=0.185 Sum_probs=241.8
Q ss_pred cHHHHHHHHHHHHhcccc-----cccCCCCcCCcchHHHHHHHHHhhCCCCCCcccCccc-----hhhHHHHHHHHHHHH
Q 011842 80 YMAGVLARYRKTLMERTK-----HHLGYPYNLDFDYGALAQLQHFSINNLGDPFIESNYG-----VHSRQFEVGVLDWFA 149 (476)
Q Consensus 80 ~~~~il~~~~~~~~~~~~-----~~~g~p~~~~~~~~~l~~~l~~~~n~~g~~~~~~~~~-----~~~~~le~~~~~~la 149 (476)
+-.++++.++++-..+.. ..+|+ ..+.+++.....+ ...+.+.. .+|+. .+..+++.++.+|++
T Consensus 479 sE~e~~r~~~~l~~kn~~~~~~~i~lGs-ct~~~~p~~~~~~--~~~~~f~~---~hP~qp~e~~qG~l~~i~e~q~~l~ 552 (954)
T PRK05367 479 SETEMMRYLRRLEDKDLALDRSMIPLGS-CTMKLNAAAEMIP--ITWPEFAN---LHPFAPAEQAAGYRELIDQLEAWLA 552 (954)
T ss_pred CHHHHHHHHHHHHhcCcCcccceeeCCc-CCCcCCHHHHHHH--HhCccccc---cCCCChHHHHHHHHHHHHHHHHHHH
Confidence 445788887777655432 23554 3333332222222 22222211 23333 346789999999999
Q ss_pred HHcCCCCCcccEEEcCCchhHHHHHHHHHHhh--CCC----cEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccCHHH
Q 011842 150 RLWELENNEYWGYITNCGTEGNLHGILVGREV--FPD----GILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCAD 223 (476)
Q Consensus 150 ~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~--~p~----~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~~~ 223 (476)
+++|++. ..+..++|++|++.+++++|.. .++ .+|++++..|.|..+.+.++|++++.++++.+|.+|+++
T Consensus 553 eltG~d~---~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~~~G~~vv~v~~d~~G~iD~~~ 629 (954)
T PRK05367 553 EITGYDA---VSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPASAVMAGMKVVVVACDENGNIDLDD 629 (954)
T ss_pred HHHCCCC---EEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHHHHHCCCEEEEECCCCCCCcCHHH
Confidence 9999973 2444567889998888777742 233 479999999999999999999999999999889999999
Q ss_pred HHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCcccccEEEE
Q 011842 224 FKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKPIGSVSV 303 (476)
Q Consensus 224 Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~~Dsi~~ 303 (476)
|+++++++..+++.|+++++++..+..+|+++|+++|+++|+ |+|||+|+.++...... ....++|++++
T Consensus 630 L~~~i~~~~~~la~V~it~pst~G~~e~~I~eI~~i~h~~G~-----~v~VDgA~~~al~~l~~-----pg~~GADi~~~ 699 (954)
T PRK05367 630 LRAKAEEHADNLAAIMITYPSTHGVFEETIREICEIVHEHGG-----QVYLDGANMNAQVGLAR-----PGDIGADVSHL 699 (954)
T ss_pred HHHHHhccCCCeEEEEEEcCCCCeeecCCHHHHHHHHHHcCC-----EEEEECcChhhccCCCC-----hhhcCCCEEEe
Confidence 999998765567788999998884445899999999999999 99999999755443221 11234999999
Q ss_pred cCCCCCCCCCCce-----eEEeehhhhhhhcCCc---cccCCCCCcccCCCCC---hhHHHHHHHHHHhChhcHHHHHHH
Q 011842 304 SGHKFVGCPMPCG-----VQITRMEHINVLSSNV---EYLASRDATIMGSRNG---HAPIFLWYTLNRKGYKGFQKEVQK 372 (476)
Q Consensus 304 s~hK~l~~p~~~G-----~l~~~~~~~~~l~~~~---~yl~~~~~~~~~sr~~---~~~l~~~~~l~~~g~~g~~~~~~~ 372 (476)
++|||+++|.++| +++++..+...+.... ..... ......+.+. ..++..|..++.+|.+|++++.++
T Consensus 700 s~HK~f~~P~G~GGPg~G~l~vr~~l~p~lpg~~v~~~~~~~-~~g~v~ta~~g~al~~~~a~~yi~~~G~~Glr~~a~~ 778 (954)
T PRK05367 700 NLHKTFCIPHGGGGPGVGPIGVKAHLAPFLPGHPVQIAGGET-GIGAVSAAPFGSASILPISWMYIRMMGAEGLRQATEV 778 (954)
T ss_pred cCcccCCCCcCCCCCceEEEeecccccccCCCCccCcCCCCC-CcCcchhHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
Confidence 9999998887755 9999876543332211 01000 0011111111 234558899999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCeEee-cC---Ce--eEEEEe-cCC-----cHHHhh-----ceeecc----cCCEEEEEEcCCC
Q 011842 373 CLRNAHYLKDRLLDAGISAML-NE---LS--STVVFE-RPQ-----DEEFVR-----RWQLAC----QGNIAHVVVMPNV 431 (476)
Q Consensus 373 ~~~~a~~l~~~L~~~g~~~~~-~~---~~--~iv~f~-~~~-----~~~~~~-----~~~l~~----~~~~lRv~~~~~~ 431 (476)
...+|+|+.++|++. +.... .+ .. .++.++ .+. ..++.+ ++..+. ..+.+|++++..+
T Consensus 779 ~~~~A~Yl~~~L~~~-~~~~~~~~~~~~~~e~i~~~~~~~~~~g~~~~di~krL~d~G~~~~t~~~pv~~~l~i~ptE~~ 857 (954)
T PRK05367 779 AILNANYIAKRLKDH-YPVLYTGANGRVAHECILDLRPLKESTGITVDDIAKRLIDYGFHAPTMSFPVAGTLMVEPTESE 857 (954)
T ss_pred HHHHHHHHHHHHHhh-cCccccCCCCCcccceEEEeecccccCCCCHHHHHHHHHHCCCeEeecCCccCCEEEEEeeecC
Confidence 999999999999873 22222 11 12 333332 111 122322 233332 2568999999999
Q ss_pred CHHHHHHHHHHHHHHHHHHHh
Q 011842 432 TIDKLDDFLNELIENRSTWYE 452 (476)
Q Consensus 432 T~edid~~~~~l~~~~~~~~~ 452 (476)
|++|||+|+++|+++.+++.+
T Consensus 858 s~~elDr~~~al~~i~~e~~~ 878 (954)
T PRK05367 858 SKAELDRFCDAMIAIRAEIDE 878 (954)
T ss_pred CHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998876
No 44
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.95 E-value=1.4e-25 Score=228.25 Aligned_cols=287 Identities=16% Similarity=0.145 Sum_probs=206.0
Q ss_pred HHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCC--
Q 011842 140 FEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISG-- 217 (476)
Q Consensus 140 le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g-- 217 (476)
..+++.+.+++++|.+ .+++|+|+|+++..++.+... |++.|+++..+|++...+++..|++++.++.+.++
T Consensus 45 ~~~~l~~~la~~~g~~----~i~~~~g~t~al~~~l~~~~~--~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~ 118 (361)
T cd06452 45 PIKDFHHDLAEFLGMD----EARVTPGAREGKFAVMHSLCE--KGDWVVVDGLAHYTSYVAAERAGLNVREVPNTGHPEY 118 (361)
T ss_pred hHHHHHHHHHHHcCCc----eEEEeCCHHHHHHHHHHHhcC--CCCEEEEcCCcchHHHHHHHhcCCEEEEEecCCCCCc
Confidence 4456667788899983 288999999999998888765 89999999999999998899999999999998654
Q ss_pred ccCHHHHHHHHHcCC----CCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCC
Q 011842 218 EIDCADFKAKLLQNK----DKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVS 293 (476)
Q Consensus 218 ~~D~~~Le~~l~~~~----~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~ 293 (476)
.+|+++|++++.+.. .++.+|+++++++++|.+.|+++|+++|+++|+ ++|+|+||+.+..+ ++
T Consensus 119 ~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~~~~i~~~~~~~~~-----~vivD~a~~~g~~~-------~~ 186 (361)
T cd06452 119 HITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHDAKKIAKVCHEYGV-----PLLLNGAYTVGRMP-------VS 186 (361)
T ss_pred ccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeeccHHHHHHHHHHcCC-----eEEEECCcccCCcC-------CC
Confidence 899999999997421 245688889999999999999999999999999 99999999865443 22
Q ss_pred Ccc-cccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCccc-CCCCChhHHHHHHHHHHhChhcHHHHHH
Q 011842 294 FKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIM-GSRNGHAPIFLWYTLNRKGYKGFQKEVQ 371 (476)
Q Consensus 294 ~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~-~sr~~~~~l~~~~~l~~~g~~g~~~~~~ 371 (476)
..+ .+|+++.++||++++|.++|++++++++++.+.....++.....+.. ++.+......+++++... .+ ..+.++
T Consensus 187 ~~~~~~d~~~~s~~K~l~~~~~~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~-~~-~~~~~~ 264 (361)
T cd06452 187 GKELGADFIVGSGHKSMAASAPIGVLATTEEWADIVFRTSQMFKIKEVELLGCTLRGAPLVTLMASFPHV-KE-RVKRWD 264 (361)
T ss_pred HHHcCCCEEEecCCccccCCCCeEEEEECHHHHHHHhccccccccceeeeeccccCchHHHHHHHHHHHH-HH-HHHHHH
Confidence 222 37999999999999899999999998877666443333221111212 222222344455555443 12 234455
Q ss_pred HHHHHHHHHHHHHHhc-CCeEee--cCCeeEEEEecCCc-----------HHHh-----hceee--cccCCEEEEEEcCC
Q 011842 372 KCLRNAHYLKDRLLDA-GISAML--NELSSTVVFERPQD-----------EEFV-----RRWQL--ACQGNIAHVVVMPN 430 (476)
Q Consensus 372 ~~~~~a~~l~~~L~~~-g~~~~~--~~~~~iv~f~~~~~-----------~~~~-----~~~~l--~~~~~~lRv~~~~~ 430 (476)
+..++++++.+.|++. |+..+. +..++++.|..+.- .++. +++.. +..++.+|+++ ..
T Consensus 265 ~~~~~~~~l~~~L~~l~g~~v~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~~~~~~~~~~ri~~-~g 343 (361)
T cd06452 265 EEVEKARWFVAELEKIEGIKQLGEKPKNHDLMFFETPSFDEIAKKHKRRGYFLYSELKKRGIHGIKPGLTRYFKLST-YG 343 (361)
T ss_pred HHHHHHHHHHHHHhcCCCeEEECCCCCCCceEEEEcCCcchhhhhccccchhHHHHHHHcCceEEcCCCceEEEEEe-cC
Confidence 5567789999999998 665442 23456777765410 0121 12221 12235678877 44
Q ss_pred CCHHHHHHHHHHHHHHH
Q 011842 431 VTIDKLDDFLNELIENR 447 (476)
Q Consensus 431 ~T~edid~~~~~l~~~~ 447 (476)
.|++|++.++++|+++.
T Consensus 344 ~~~e~~~~l~~al~~~~ 360 (361)
T cd06452 344 LTWEQVEYVVDAFKEIA 360 (361)
T ss_pred CCHHHHHHHHHHHHHHh
Confidence 79999999999998653
No 45
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.95 E-value=2.1e-25 Score=226.98 Aligned_cols=296 Identities=15% Similarity=0.101 Sum_probs=217.1
Q ss_pred hHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCc-EEEecCCCchH-HHHHHHHcCCeEEEEeCC
Q 011842 137 SRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDG-ILYASRESHYS-VFKAARMYRMECVKVDCL 214 (476)
Q Consensus 137 ~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~-~Vl~s~~~H~S-~~~~~~~~G~~v~~v~~~ 214 (476)
..++.+++++.+++++|.+++...+++|+|||+|+..++.+... +++ +|+++...|.+ +...++..|++++.++.+
T Consensus 33 ~~~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l~~--~~~~vlv~~~~~~~~~~~~~a~~~g~~~~~v~~~ 110 (363)
T TIGR02326 33 YNIVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSAVP--KDGKLLVVINGAYGARIVQIAEYLGIPHHVVDTG 110 (363)
T ss_pred HHHHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhcCC--CCCeEEEEeCChhhHHHHHHHHHcCCceEEEeCC
Confidence 45677788999999999975433588999999999988877654 555 45555555555 357788899999999998
Q ss_pred CCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCC
Q 011842 215 ISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSF 294 (476)
Q Consensus 215 ~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~ 294 (476)
+++.+|+++|++++.++++ +.+|.+++..|+||.+.|+++|+++|++||+ ++++|++|+.+..+ +++
T Consensus 111 ~~~~~d~~~l~~~l~~~~~-~~~v~~~~~~~~tG~~~~i~~I~~l~~~~g~-----~livD~~~~~g~~~-------~~~ 177 (363)
T TIGR02326 111 EVEPPDVVEVEAILAADPA-ITHIALVHCETTTGILNPIEAVAKLAHRHGK-----VTIVDAMSSFGGIP-------IDI 177 (363)
T ss_pred CCCCCCHHHHHHHHhhCCC-ccEEEEEeecCCccccCcHHHHHHHHHHcCC-----EEEEEccccccCcc-------cch
Confidence 8889999999999987543 2367777889999999999999999999999 99999998765544 344
Q ss_pred cc-cccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCC-cc-ccC---------CCCCcccCCCCChhHHHHHHHHHHhC
Q 011842 295 KK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSN-VE-YLA---------SRDATIMGSRNGHAPIFLWYTLNRKG 362 (476)
Q Consensus 295 ~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~-~~-yl~---------~~~~~~~~sr~~~~~l~~~~~l~~~g 362 (476)
.+ .+|++++++|||+++|.|+|+++++++.++.+... .. |+. .......++.+....+++..+++.+.
T Consensus 178 ~~~~~D~~~~s~~K~l~~p~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~~~~~~~al~~al~~l~ 257 (363)
T TIGR02326 178 AELHIDYLISSANKCIQGVPGFGFVIARQAELAACKGNARSLSLDLYDQWRCMEDNHGKWRFTSPTHVVHAFAQALLELE 257 (363)
T ss_pred hhcCccEEEecCccccccCCcceEEEECHHHHHHhhcCCCceeecHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHH
Confidence 33 38999999999999999999999998866543211 11 110 00011223444445566667777764
Q ss_pred hh-cHHHHHHHHHHHHHHHHHHHHhcCCeEeecC--CeeE-EEEecCCc-----HHHh-----hceeecc----cCCEEE
Q 011842 363 YK-GFQKEVQKCLRNAHYLKDRLLDAGISAMLNE--LSST-VVFERPQD-----EEFV-----RRWQLAC----QGNIAH 424 (476)
Q Consensus 363 ~~-g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~--~~~i-v~f~~~~~-----~~~~-----~~~~l~~----~~~~lR 424 (476)
.+ +++++.+++.++++++++.|++.|+..+.++ .+++ +.|..++. ..+. +++.+.. ..+.+|
T Consensus 258 ~~g~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~L~~~gi~v~~g~~~~~~~iR 337 (363)
T TIGR02326 258 KEGGVAARHQRYQQNQKTLVAGMRALGFEPLLDDEIQSPIITSFYSPEDPDYRFADFYQRLKEQGFVIYPGKVSQVDCFR 337 (363)
T ss_pred HhhCHHHHHHHHHHHHHHHHHHHHHcCCeeccCcccCCceEEEEECCCCCCCCHHHHHHHHHHCCEEEECCcCCCCCEEE
Confidence 44 5888999999999999999999987655433 2443 44555431 2222 2333322 246899
Q ss_pred EEEcCCCCHHHHHHHHHHHHHHH
Q 011842 425 VVVMPNVTIDKLDDFLNELIENR 447 (476)
Q Consensus 425 v~~~~~~T~edid~~~~~l~~~~ 447 (476)
++++.++|.+|+++++++|+++.
T Consensus 338 i~~~~~~~~edv~~~l~~l~~~l 360 (363)
T TIGR02326 338 IGNIGEVDAADITRLLTAIGKAM 360 (363)
T ss_pred EecCCCCCHHHHHHHHHHHHHHh
Confidence 99988999999999999998865
No 46
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.95 E-value=1.8e-25 Score=230.16 Aligned_cols=292 Identities=16% Similarity=0.150 Sum_probs=206.3
Q ss_pred hhhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHH-HhhCCCcEEEecCCCchHHHHHHHHcC----CeEE
Q 011842 135 VHSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVG-REVFPDGILYASRESHYSVFKAARMYR----MECV 209 (476)
Q Consensus 135 ~~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa-~~~~p~~~Vl~s~~~H~S~~~~~~~~G----~~v~ 209 (476)
.+..++++++++++++++|.+.+ ..+++++|+.+...++.++ ....++++|+++++.|.++..++..+| ++++
T Consensus 60 ~g~~~~~~~~~~~la~~~g~~~~--~v~~~~~g~~~~~~~~~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~ 137 (398)
T cd00613 60 QGRLQALFELQTMLCELTGMDVA--NASLQDEATAAAEAAGLAAIRAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVV 137 (398)
T ss_pred hhHHHHHHHHHHHHHHHHCCCcc--ceeccCchHHHHHHHHHHHHhcccCCCEEEEcCccCcchHHHHHHhcccCCcEEE
Confidence 36679999999999999998753 3667776665544444443 331248999999999999998888887 8999
Q ss_pred EEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCH-HHHHHHHHHhCCCCCceEEEEecCccccccccccc
Q 011842 210 KVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDL-DLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKK 288 (476)
Q Consensus 210 ~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l-~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~ 288 (476)
.+++++++.+|+++|++++.++++ +|++++++ ++|.+.|+ ++|+++|++||+ |+++|++|+.+..+....
T Consensus 138 ~v~~~~~~~~d~~~l~~~i~~~t~---~viv~~~~-~~G~~~~~l~~i~~la~~~g~-----~livD~~~~~~~~~~~~~ 208 (398)
T cd00613 138 EVPSDEGGTVDLEALKEEVSEEVA---ALMVQYPN-TLGVFEDLIKEIADIAHSAGA-----LVYVDGDNLNLTGLKPPG 208 (398)
T ss_pred EeccCCCCCcCHHHHHHhcCCCeE---EEEEECCC-CCceecchHHHHHHHHHhcCC-----EEEEEeccccccCCCChH
Confidence 999987788999999999976553 77788775 78999885 999999999999 999999986544331111
Q ss_pred CCCCCCcccccEEEEcCCCCCCC----CCCceeEEeehhhhhhhcCCcc------------ccC-C---------CCCcc
Q 011842 289 APKVSFKKPIGSVSVSGHKFVGC----PMPCGVQITRMEHINVLSSNVE------------YLA-S---------RDATI 342 (476)
Q Consensus 289 ~~~~~~~~~~Dsi~~s~hK~l~~----p~~~G~l~~~~~~~~~l~~~~~------------yl~-~---------~~~~~ 342 (476)
...+|+++.++|||++. ++++|++++++++++.+..... |+. . .....
T Consensus 209 ------~~~~d~~~~s~~K~~~p~g~Ggp~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~ 282 (398)
T cd00613 209 ------EYGADIVVGNLQKTGVPHGGGGPGAGFFAVKKELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSN 282 (398)
T ss_pred ------HcCCCEEEeeccccCCCCCCCCCceeEEEEhhhhHhhCCCCeeccccccCCCcceEEecccchhhccccccccc
Confidence 12389999999999932 4778899998877665422100 000 0 00000
Q ss_pred cCCCCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeec-CCeeEEEEecCC-----cHHHhh----
Q 011842 343 MGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLN-ELSSTVVFERPQ-----DEEFVR---- 412 (476)
Q Consensus 343 ~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~-~~~~iv~f~~~~-----~~~~~~---- 412 (476)
..+.+.......|+++..++.++++++.++..+++++++++|++.+...... +...+++|..+. ..++.+
T Consensus 283 ~~~~~~~~~~~a~~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~L~~ 362 (398)
T cd00613 283 ICTGQALLALMAAMYIVYLGPEGLKEIAERAHLNANYLAKRLKEVGGVLPFNGPFFHEFVLRLPPLYGIRAEDLAKALID 362 (398)
T ss_pred ceecHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCeeEEEEEEcCCcchHHHHHHHHhhhh
Confidence 1111122344566667777888999999999999999999999987654211 223556676653 122222
Q ss_pred -ceeecc----cCCEEEEEEcCCCCHHHHHHHHHHH
Q 011842 413 -RWQLAC----QGNIAHVVVMPNVTIDKLDDFLNEL 443 (476)
Q Consensus 413 -~~~l~~----~~~~lRv~~~~~~T~edid~~~~~l 443 (476)
++.+.. ..+.+|++++.++|++|||+++++|
T Consensus 363 ~gi~~~~~~~~~~~~lRis~~~~~t~edid~~~~~L 398 (398)
T cd00613 363 GGFHAPTMYLPVDGTLMIEPTETETKEELDALLEAL 398 (398)
T ss_pred cCccccccccCCCCeEEEEcCCCCCHHHHHHHHHhC
Confidence 222222 4578999999999999999999864
No 47
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.95 E-value=2e-25 Score=233.49 Aligned_cols=349 Identities=14% Similarity=0.118 Sum_probs=227.7
Q ss_pred ccCCCCCcHHHHHHHHHHHHhccc-----ccccC--CCCcCCcchHHHHHHHHH--hhCCCCCCcccCccchhhHHHHHH
Q 011842 73 FTGDKEAYMAGVLARYRKTLMERT-----KHHLG--YPYNLDFDYGALAQLQHF--SINNLGDPFIESNYGVHSRQFEVG 143 (476)
Q Consensus 73 ~~~~~~~~~~~il~~~~~~~~~~~-----~~~~g--~p~~~~~~~~~l~~~l~~--~~n~~g~~~~~~~~~~~~~~le~~ 143 (476)
++|+.+ +.+++++.+.+....+. ..++| .|++ ..+....+.+.. .++.. .++.. ....+..+...+
T Consensus 42 ~lp~~~-~~~~v~~~~~~~~~~~~~~~~~~~~lg~g~~~~--~~p~~~~~~~~~~~~~~~y-~~~~~-~~~~g~~~~~~e 116 (447)
T PRK00451 42 DLPPGL-SEMELLRHLRELAAKNKTAEEYPSFLGAGAYDH--YIPAVVDHIISRSEFYTAY-TPYQP-EISQGTLQAIFE 116 (447)
T ss_pred CCCCCC-CHHHHHHHHHHHHhcCCCcCcCcccCcccccCC--cCcHHHHHHHhchhHHHhc-CCCCC-ccchHHHHHHHH
Confidence 577765 88899999988774442 12333 1211 112333333211 11110 01000 112245667777
Q ss_pred HHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHH----cCCeEEEEeCCCCCcc
Q 011842 144 VLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARM----YRMECVKVDCLISGEI 219 (476)
Q Consensus 144 ~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~----~G~~v~~v~~~~~g~~ 219 (476)
..+++++++|++.+ .+++|+|||+++..++++.+ ..+++.|++++..|.++.++++. .|++++.+|++++ .+
T Consensus 117 ~~~~la~l~g~~~~--~v~~~~g~t~~~~~~~~a~~-~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~-~~ 192 (447)
T PRK00451 117 YQTMICELTGMDVA--NASMYDGATALAEAALMAVR-ITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYEDG-VT 192 (447)
T ss_pred HHHHHHHHhCCCcc--eEEecCcHHHHHHHHHHHHH-hcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCCCC-CC
Confidence 77899999999864 48899999986655554433 23889999999999998887665 5999999999877 99
Q ss_pred CHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEE--ecCcccccccccccCCCCCCccc
Q 011842 220 DCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHC--DGALFGLMMPFVKKAPKVSFKKP 297 (476)
Q Consensus 220 D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhv--D~a~~g~~~~~~~~~~~~~~~~~ 297 (476)
|+++|+++|+++++ +|+++++ |++|.++|+++|+++|+++|+ |+++ |.+..+ ... ......
T Consensus 193 d~~~l~~~i~~~t~---~v~l~~p-n~tG~v~~l~~I~~~a~~~~~-----~~iv~~d~~~~g-~~~-------~~~~~~ 255 (447)
T PRK00451 193 DLEALEAAVDDDTA---AVVVQYP-NFFGVIEDLEEIAEIAHAGGA-----LFIVGVDPVSLG-LLK-------PPGEYG 255 (447)
T ss_pred CHHHHHHhcCCCeE---EEEEECC-CCCCeeCCHHHHHHHHHHCCC-----EEEEEcChHHhc-cCC-------CcccCC
Confidence 99999999976654 7778877 889999999999999999999 9998 544222 111 011224
Q ss_pred ccEEEEcCCCC----CCCCCCceeEEeehhhhhhhcCC-----------cccc----------CCCC-CcccCCCCChhH
Q 011842 298 IGSVSVSGHKF----VGCPMPCGVQITRMEHINVLSSN-----------VEYL----------ASRD-ATIMGSRNGHAP 351 (476)
Q Consensus 298 ~Dsi~~s~hK~----l~~p~~~G~l~~~~~~~~~l~~~-----------~~yl----------~~~~-~~~~~sr~~~~~ 351 (476)
+|+++.++||| .++++++|++++++++++.+... ..|. .... ....+++....+
T Consensus 256 ~D~~~~s~~k~~~~~~~~Gpg~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (447)
T PRK00451 256 ADIVVGEGQPLGIPLSFGGPYLGFFATRKKLVRQMPGRLVGETVDADGKRGFVLTLQAREQHIRREKATSNICTNQALNA 335 (447)
T ss_pred CCEEEECCCcCCCCCCCCCCCchHHHhhHHHHhhCCCCEeeeecccCCCeeeEeeccccccccccccccccccccHHHHH
Confidence 89999999997 34467999999998876654210 0111 0000 001111111222
Q ss_pred HHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCC-eeEEEEecC-CcHHHhhcee---------e----
Q 011842 352 IFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNEL-SSTVVFERP-QDEEFVRRWQ---------L---- 416 (476)
Q Consensus 352 l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~-~~iv~f~~~-~~~~~~~~~~---------l---- 416 (476)
+..+.+++.++.++++++.++..++++++.++|++.+...+.... ...+++..+ ...++.+++. .
T Consensus 336 ~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~v~~~~~~~~~~~~L~~~gi~~~~~~~~~~ 415 (447)
T PRK00451 336 LAAAIYMSLLGPEGLRELAEQNHQKAHYLAERLAEIGGVELFDGPFFNEFVVRLPKPAEEVNEALLEKGILGGYDLGRYY 415 (447)
T ss_pred HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhhcCCEEecCCCeEEEEEEecCCCHHHHHHHHHhcCCCCCccccccc
Confidence 445555677888899999999999999999999998644443222 233345543 3333332211 1
Q ss_pred cccCCEEEEEEcCCCCHHHHHHHHHHHHHHH
Q 011842 417 ACQGNIAHVVVMPNVTIDKLDDFLNELIENR 447 (476)
Q Consensus 417 ~~~~~~lRv~~~~~~T~edid~~~~~l~~~~ 447 (476)
+...+.+|++++.++|++|||+|+++|+++.
T Consensus 416 ~~~~~~~rvs~~~~~t~e~i~~l~~~L~~~~ 446 (447)
T PRK00451 416 PELGNHLLVCVTEKRTKEDIDALVAALGEVL 446 (447)
T ss_pred CCcCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 1113589999999999999999999998763
No 48
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.95 E-value=2e-25 Score=230.59 Aligned_cols=292 Identities=12% Similarity=0.050 Sum_probs=206.4
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhC-CCcEEEecCCCchHHH----HHHHHcCCeE----E
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVF-PDGILYASRESHYSVF----KAARMYRMEC----V 209 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~-p~~~Vl~s~~~H~S~~----~~~~~~G~~v----~ 209 (476)
.++++..+ + +++|.+++ ..+||+|+|+++..++....... ++++|+++..+|.|.. ..++..|+++ +
T Consensus 71 ~~~~~~~~-~-~l~g~~~~--~v~~~~~~t~~l~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~ 146 (406)
T TIGR01814 71 TLDESLLK-L-RLVGAKED--EVVVMNTLTINLHLLLASFYKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMV 146 (406)
T ss_pred hhhhhhcc-c-cccCCCCC--cEEEeCCchHHHHHHHHHhcCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceE
Confidence 33444433 4 89998754 48999999999888877653211 2347889999998843 3456678887 5
Q ss_pred EEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccC
Q 011842 210 KVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKA 289 (476)
Q Consensus 210 ~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~ 289 (476)
.++.+.+|.+|++++++.++..+.++.+|++++.++.+|.+.|+++|+++|+++|+ +++||++|+.+..|
T Consensus 147 ~~~~~~~g~~~~~~l~~~~~~~~~~t~lv~~~~v~~~tG~~~~~~~i~~~~~~~g~-----~~~vD~aq~~G~~~----- 216 (406)
T TIGR01814 147 QIEPREEETLRLEDILDTIEKNGDDIAVILLSGVQYYTGQLFDMAAITRAAHAKGA-----LVGFDLAHAVGNVP----- 216 (406)
T ss_pred EeccCCCCccCHHHHHHHHHhcCCCeEEEEEeccccccceecCHHHHHHHHHHcCC-----EEEEEcccccCCcc-----
Confidence 67766678899999999987544445589999999999999999999999999999 99999999988776
Q ss_pred CCCCCcc-cccEEEEcCCCCCCCCCCceeEEeehhhhhhh-cCCccccCC---------------CCCcccCCCCChhHH
Q 011842 290 PKVSFKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVL-SSNVEYLAS---------------RDATIMGSRNGHAPI 352 (476)
Q Consensus 290 ~~~~~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l-~~~~~yl~~---------------~~~~~~~sr~~~~~l 352 (476)
+++.+ ++|++++++|||+++|+| |+++++.+....+ +....|... .+.-..|+.+....+
T Consensus 217 --id~~~~gvD~~~~s~hK~l~g~pG-~~l~v~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~ 293 (406)
T TIGR01814 217 --LDLHDWGVDFACWCTYKYLNAGPG-AGAFVHEKHAHTERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVA 293 (406)
T ss_pred --cccccCCCCEEEEcCccccCCCCC-eEEEEehhhhhhcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHH
Confidence 45444 499999999999987778 6666655432222 111111100 000112455544555
Q ss_pred HHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhc-C----CeEeecC----CeeEEEEecC-CcHHHh-----hceeec
Q 011842 353 FLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDA-G----ISAMLNE----LSSTVVFERP-QDEEFV-----RRWQLA 417 (476)
Q Consensus 353 ~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~-g----~~~~~~~----~~~iv~f~~~-~~~~~~-----~~~~l~ 417 (476)
.+.++++.+...|++++.++..++++++++.|++. + +..+.+. ..++++|..+ +...+. +++.+.
T Consensus 294 ~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~i~~~~~~~~r~~~v~~~~~~~~~~~~~~L~~~gi~v~ 373 (406)
T TIGR01814 294 ALRGSLDIFDQAGMEALRKKSLLLTDYLEELIKARCGGPPVLTIITPRDHAQRGCQLSLTHPVPGKAVFQALIKRGVIGD 373 (406)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCceEEeCCCChhhcCCeEEEEecCCHHHHHHHHHHCCEEEe
Confidence 66677887767789999999999999999999875 2 4333322 1357888776 433332 233333
Q ss_pred cc-CCEEEEEE-cCCCCHHHHHHHHHHHHHHH
Q 011842 418 CQ-GNIAHVVV-MPNVTIDKLDDFLNELIENR 447 (476)
Q Consensus 418 ~~-~~~lRv~~-~~~~T~edid~~~~~l~~~~ 447 (476)
.. .+.+|+++ +.++|++|||+++++|+++.
T Consensus 374 ~~~~~~iRiS~~~~~nt~~did~l~~~l~~~~ 405 (406)
T TIGR01814 374 KREPSVIRVAPVPLYNTFVDVYDAVNVLEEIL 405 (406)
T ss_pred ccCCCeEEEechhccCCHHHHHHHHHHHHHHh
Confidence 22 36899998 57999999999999998763
No 49
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.95 E-value=2.9e-25 Score=227.83 Aligned_cols=295 Identities=14% Similarity=0.069 Sum_probs=208.3
Q ss_pred ccCCCCCcHHHHHHHHHHHHhcccccccCCCCcCCc------chHHHHHHHH----HhhCCCCCCcccCccchh---hHH
Q 011842 73 FTGDKEAYMAGVLARYRKTLMERTKHHLGYPYNLDF------DYGALAQLQH----FSINNLGDPFIESNYGVH---SRQ 139 (476)
Q Consensus 73 ~~~~~~~~~~~il~~~~~~~~~~~~~~~g~p~~~~~------~~~~l~~~l~----~~~n~~g~~~~~~~~~~~---~~~ 139 (476)
.+|++|-+-+.|...+.++-...+++ +|.+.+. .++.+-.=.. .++...|+-....|-..+ ...
T Consensus 29 ~~p~~g~~~~~i~~~l~~l~~~~~~~---~~~~~~~gere~rv~~~~~~~~~~~~~hgigr~~~l~~~q~ka~gss~~~~ 105 (444)
T TIGR03531 29 KIPEEGWDDETIELFLHELSVMDTNN---FPNNVGVGEREGRVFSKLVARRHYRFCHGIGRSGDLVAPQPKAAGSSLLYK 105 (444)
T ss_pred cCCccCCCHHHHHHHHHHHhcCCcCC---CccccCcCcccceeechhhhhcccceecCCCCcccccccCccccCccHHHH
Confidence 68899988888877777665444442 3433322 2222222111 222223332222222222 568
Q ss_pred HHHHHHHHHHHHcCCCCCcccEEEcCCch-hHHHHHHHHHHhhC-CCcEEEecCCCchHHHHHHHHcCCeEEEEeC---C
Q 011842 140 FEVGVLDWFARLWELENNEYWGYITNCGT-EGNLHGILVGREVF-PDGILYASRESHYSVFKAARMYRMECVKVDC---L 214 (476)
Q Consensus 140 le~~~~~~la~l~g~~~~~~~g~~t~ggt-~An~~al~aa~~~~-p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~---~ 214 (476)
+..++.+++++++|.+.- ..+++++||| +++.+++.+++... +++.|+++..+|.|+.+++.++|++++.+++ +
T Consensus 106 l~~~~e~~~~~~~G~~~~-~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~kAi~~~G~~pv~Vd~~~d~ 184 (444)
T TIGR03531 106 LTNKLVKDFLKLLGLRSI-KSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKAISTAGFEPRVIETVLDG 184 (444)
T ss_pred HHHHHHHHHHHHcCCCCC-CEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHHHHHHcCCeEEEeeeeecC
Confidence 899999999999999732 2388899999 78888888877532 5789999999999999999999999999995 3
Q ss_pred CCCccCHHHHHHHHHcCC-CCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCC
Q 011842 215 ISGEIDCADFKAKLLQNK-DKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVS 293 (476)
Q Consensus 215 ~~g~~D~~~Le~~l~~~~-~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~ 293 (476)
+++.+|+++|+++|++.+ +.+.+|+.+.+++..|..+|+++|+++|++||+ |+|+|+||+.... ...+...-.
T Consensus 185 ~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI-----~lIvDaAyg~~~~-~~~~~~~~g 258 (444)
T TIGR03531 185 DELTTDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPDDIEEIAKICANYDI-----PHIVNNAYGLQSN-KYMELINKA 258 (444)
T ss_pred cCCCcCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCC-----EEEEECcCcCcCh-hhhhhhhcc
Confidence 568899999999998765 333344444445666789999999999999999 9999999985321 111110011
Q ss_pred Ccc-cccEEEEcCCCCCCCCCCceeEEeehh-hhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHH
Q 011842 294 FKK-PIGSVSVSGHKFVGCPMPCGVQITRME-HINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQ 371 (476)
Q Consensus 294 ~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~-~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~ 371 (476)
... .+|++++++||++++|.++|+++++++ +.+.+.. .|.. .......+.+|+++..+|.++++++++
T Consensus 259 ~~~Grad~vv~s~hK~l~~pg~Gg~I~~~d~el~~~i~~--~y~g--------~~~~s~~~~~~~~ll~~G~~g~~~li~ 328 (444)
T TIGR03531 259 IKVGRVDAVVSSTDKNFMVPVGGAIIYSFDENFIQEISK--SYPG--------RASASPSLDVLITLLSLGSKGYLELLK 328 (444)
T ss_pred ccccCCCeEEEeCccCCCCCCCEEEEEECCHHHHHHHHH--hccC--------CCCChHHHHHHHHHHHhCHHHHHHHHH
Confidence 112 379999999999999888888888655 5555432 2321 112234678999999999999999999
Q ss_pred HHHHHHHHHHHHHHhc
Q 011842 372 KCLRNAHYLKDRLLDA 387 (476)
Q Consensus 372 ~~~~~a~~l~~~L~~~ 387 (476)
+..++++++.+.|++.
T Consensus 329 ~~~~~a~~l~~~L~~l 344 (444)
T TIGR03531 329 ERKEMYKYLKELLQKL 344 (444)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999999874
No 50
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.95 E-value=5.4e-25 Score=243.04 Aligned_cols=303 Identities=14% Similarity=0.106 Sum_probs=228.9
Q ss_pred chhhHHHHHHHHHHHHHHcCCCCCcccEEEcCCch----hHHHHHHHHHHhhCCCc----EEEecCCCchHHHHHHHHcC
Q 011842 134 GVHSRQFEVGVLDWFARLWELENNEYWGYITNCGT----EGNLHGILVGREVFPDG----ILYASRESHYSVFKAARMYR 205 (476)
Q Consensus 134 ~~~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt----~An~~al~aa~~~~p~~----~Vl~s~~~H~S~~~~~~~~G 205 (476)
..+..++..++++++++++|++. +.|++++| +|+++++++..+. +|+ +|+++..+|.+....+.+.|
T Consensus 563 ~~g~~~~~~~~r~~la~i~g~~~----v~f~pnaga~ge~a~~~vi~~~~~~-~Gd~~r~~vli~~~aH~sn~a~a~~~G 637 (993)
T PLN02414 563 AQGYQEMFEDLGDLLCEITGFDS----FSLQPNAGAAGEYAGLMVIRAYHLS-RGDHHRNVCIIPVSAHGTNPASAAMCG 637 (993)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCe----EEEcCCCcHHHHHHHHHHHHHHHhc-cCCCCCCEEEeCCCcCccCHHHHHHCC
Confidence 34566888899999999999953 89999999 8999998888652 355 89999999999999999999
Q ss_pred CeEEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccc
Q 011842 206 MECVKVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPF 285 (476)
Q Consensus 206 ~~v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~ 285 (476)
++++.||++++|.+|+++|+++|++++++..+|++++++|..|..+|+++|+++|+++|+ ++++|+|+..+....
T Consensus 638 ~~vv~v~~d~~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Ga-----lv~vDgAq~~a~~~l 712 (993)
T PLN02414 638 MKIVVVGTDAKGNINIEELRKAAEAHKDNLAALMVTYPSTHGVYEEGIDEICDIIHDNGG-----QVYMDGANMNAQVGL 712 (993)
T ss_pred CEEEEeccCCCCCcCHHHHHHHHhccCCCeEEEEEECCCccccccchHHHHHHHHHHcCC-----EEEEEecCHHhccCc
Confidence 999999999999999999999999765555699999999999999999999999999999 999999996544221
Q ss_pred cccCCCCCCcccccEEEEcCCCCCCCCCC-----ceeEEeehhhhhhhcCCc-----cccCCCCCcccCCCCC------h
Q 011842 286 VKKAPKVSFKKPIGSVSVSGHKFVGCPMP-----CGVQITRMEHINVLSSNV-----EYLASRDATIMGSRNG------H 349 (476)
Q Consensus 286 ~~~~~~~~~~~~~Dsi~~s~hK~l~~p~~-----~G~l~~~~~~~~~l~~~~-----~yl~~~~~~~~~sr~~------~ 349 (476)
.. ....++|+++++.|||++.|.+ +|++++++++...++... .++.....+-.|+++. .
T Consensus 713 ~~-----p~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~L~p~lPg~~v~~~~~~~~r~~~s~iGt~~~a~~g~al 787 (993)
T PLN02414 713 TS-----PGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVPTGGIPRPEKTQPLGTISAAPWGSAL 787 (993)
T ss_pred CC-----ccccCCCEEEecCCccCCcCcccCCCCeeeEEEchhhcccCCCCccccCCCcccccCCCCcCCccchhhhhHH
Confidence 11 1123499999999999987765 999999988765543221 1111111122355432 2
Q ss_pred hHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCCeEee-cC--C---eeEEEEe-cC----C-cHHHhh-----
Q 011842 350 APIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAML-NE--L---SSTVVFE-RP----Q-DEEFVR----- 412 (476)
Q Consensus 350 ~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~-~~--~---~~iv~f~-~~----~-~~~~~~----- 412 (476)
..+..|..+..+|.+|+++..++.+.+++|++++|.+ ++.... .+ . -.++.++ .+ . ..++.+
T Consensus 788 ~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~-~~~~~~~~~~~~~~hEfv~~~~~l~~~~g~~~~di~krL~d~ 866 (993)
T PLN02414 788 ILPISYTYIAMMGSEGLTDASKIAILNANYMAKRLEG-HYPVLFRGKNGTCAHEFIIDLRPFKNTAGIEPEDVAKRLMDY 866 (993)
T ss_pred HHHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHh-hCCccccCCCCCeeeeEEEeccccccccCCCHHHHHHHHHHc
Confidence 3456778888999999999999999999999999987 333222 21 1 1223333 11 1 122222
Q ss_pred ceeec----ccCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHh
Q 011842 413 RWQLA----CQGNIAHVVVMPNVTIDKLDDFLNELIENRSTWYE 452 (476)
Q Consensus 413 ~~~l~----~~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~~ 452 (476)
++..+ ...+.+|++.+...|++|||+|+++|+++.+++.+
T Consensus 867 Gihapt~~~pv~~~lmiepTE~~skeelDrf~~al~~i~~e~~~ 910 (993)
T PLN02414 867 GFHAPTMSWPVPGTLMIEPTESESKAELDRFCDALISIREEIAD 910 (993)
T ss_pred CcEEeeeccccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHHH
Confidence 22222 23678999999999999999999999999998875
No 51
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.94 E-value=2.5e-24 Score=217.88 Aligned_cols=294 Identities=15% Similarity=0.147 Sum_probs=212.9
Q ss_pred HHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEE-ecCCCchH-HHHHHHHcCCeEEEEeCCC
Q 011842 138 RQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILY-ASRESHYS-VFKAARMYRMECVKVDCLI 215 (476)
Q Consensus 138 ~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl-~s~~~H~S-~~~~~~~~G~~v~~v~~~~ 215 (476)
.++.+++++.+++++|.+++...+++++|||+++..++..... +++.++ ++...|.+ +...++..|++++.++.+.
T Consensus 30 ~~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~~--~~~~vi~~~~~~~~~~~~~~a~~~g~~~~~i~~~~ 107 (355)
T TIGR03301 30 NDVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLVP--RDGKLLVLINGAYGERLAKICEYLGIPHTDLNFSE 107 (355)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhccC--CCCeEEEECCCchhhHHHHHHHHcCCceEEEecCC
Confidence 4778889999999999986433577899999999998887654 555544 44444443 5677888999999999887
Q ss_pred CCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCc
Q 011842 216 SGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFK 295 (476)
Q Consensus 216 ~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~ 295 (476)
++.+|+++|++.+.+++ +..+++.+++.|++|.+.|+++|+++|++||+ ++++|++++.+..+ +++.
T Consensus 108 ~~~~d~~~l~~~l~~~~-~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~-----~livD~~~s~g~~~-------~~~~ 174 (355)
T TIGR03301 108 YEPPDLNRIEEALAADP-DITHVATVHHETTTGILNPLEAIAKVARSHGA-----VLIVDAMSSFGAIP-------IDIE 174 (355)
T ss_pred CCCCCHHHHHHHHHhCC-CceEEEEEecCCcccchhHHHHHHHHHHHcCC-----EEEEEeccccCCcc-------cchh
Confidence 78999999999998654 33466677889999999999999999999999 99999988654433 3333
Q ss_pred c-cccEEEEcCCCCCCCCCCceeEEeehhhhhhhcC-CccccCC---------CCCcccCCCCChhHHHHHHHHHHhChh
Q 011842 296 K-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSS-NVEYLAS---------RDATIMGSRNGHAPIFLWYTLNRKGYK 364 (476)
Q Consensus 296 ~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~-~~~yl~~---------~~~~~~~sr~~~~~l~~~~~l~~~g~~ 364 (476)
+ .+|+++.++|||+++|.|+|+++++++.++.+.. ...|..+ ......++.+.....++..+++.+..+
T Consensus 175 ~~~~d~~~~s~~K~l~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~ 254 (355)
T TIGR03301 175 ELDVDALIASANKCLEGVPGFGFVIARRDLLEASAGNARSLYLDLYDQWAYMEKTGKWRFTPPTHTVYAFAQALEELEAE 254 (355)
T ss_pred hcCccEEEecCCcccccCCceeEEEECHHHHHHhhCCCCCceeeHHHHHHHhhhcCCCCCCCcHHHHHHHHHHHHHHHHc
Confidence 3 3899999999999888999999999987665531 1111110 001112233333344556677766556
Q ss_pred c-HHHHHHHHHHHHHHHHHHHHhcCCeEeecCC--ee-EEEEecCC----c-HHHh-----hceeeccc----CCEEEEE
Q 011842 365 G-FQKEVQKCLRNAHYLKDRLLDAGISAMLNEL--SS-TVVFERPQ----D-EEFV-----RRWQLACQ----GNIAHVV 426 (476)
Q Consensus 365 g-~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~--~~-iv~f~~~~----~-~~~~-----~~~~l~~~----~~~lRv~ 426 (476)
+ +++..++..++++++.+.|++.|+..+.++. .+ ++.|..+. + .++. +++.+... .+.+|++
T Consensus 255 g~~~~~~~~~~~~~~~~~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~i~~~~~~~~~~iRis 334 (355)
T TIGR03301 255 GGVPARIARYRRNRELLVDGLRALGFQPLLPERWQSPIIVSFLYPDDPDFDFDDFYQELKERGFVIYPGKLTLADTFRIG 334 (355)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHcCCeeecCCCCCCCcEEEEECCCCCcchHHHHHHHHHHCCEEEECCccccccEEEEe
Confidence 5 8889999999999999999998876444332 23 34565553 1 1222 22333221 2689999
Q ss_pred EcCCCCHHHHHHHHHHHHHH
Q 011842 427 VMPNVTIDKLDDFLNELIEN 446 (476)
Q Consensus 427 ~~~~~T~edid~~~~~l~~~ 446 (476)
++.++|++|++++++.|+++
T Consensus 335 ~~~~~~~~~i~~~~~~l~~~ 354 (355)
T TIGR03301 335 TIGEIDAADIERLLEAIKDA 354 (355)
T ss_pred cCCCCCHHHHHHHHHHHHhh
Confidence 99999999999999999864
No 52
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.94 E-value=4.5e-24 Score=217.59 Aligned_cols=299 Identities=15% Similarity=0.118 Sum_probs=218.5
Q ss_pred hHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHH--HHHHHHcCCeEEEEeCC
Q 011842 137 SRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSV--FKAARMYRMECVKVDCL 214 (476)
Q Consensus 137 ~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~--~~~~~~~G~~v~~v~~~ 214 (476)
..+...++++.+++++|.+++....++|++||.++..++.+... +++.|++....++.. ...++..|++++.+|.+
T Consensus 35 ~~~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l~~--~~~~vlv~~~~~~~~~~~~~~~~~g~~~~~i~~~ 112 (368)
T PRK13479 35 FNALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSLVP--RDGKVLVPDNGAYGARIAQIAEYLGIAHVVLDTG 112 (368)
T ss_pred HHHHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhccC--CCCeEEEEeCCchHHHHHHHHHHcCCcEEEEECC
Confidence 34677889999999999865434577899999999998888754 777777766776654 47788899999999998
Q ss_pred CCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCC
Q 011842 215 ISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSF 294 (476)
Q Consensus 215 ~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~ 294 (476)
.++.+|+++|+++++++++ ..+|.+++++|++|.+.|+++|.++|+++|+ ++++|++++.+..+ ++.
T Consensus 113 ~~~~~d~~~l~~~l~~~~~-~~~v~~~~~~~~tG~~~~~~~i~~l~~~~~~-----~livDa~~~~g~~~-------~~~ 179 (368)
T PRK13479 113 EDEPPDAAEVEAALAADPR-ITHVALVHCETTTGILNPLDEIAAVAKRHGK-----RLIVDAMSSFGAIP-------IDI 179 (368)
T ss_pred CCCCCCHHHHHHHHHhCCC-CcEEEEEcccCccccccCHHHHHHHHHHcCC-----EEEEEcccccCCcc-------ccc
Confidence 7788999999999976542 3367788999999999999999999999999 99999887644333 343
Q ss_pred cc-cccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCC-ccc-cCC--------CCCcccCCCCChhHHHHHHHHHHhCh
Q 011842 295 KK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSN-VEY-LAS--------RDATIMGSRNGHAPIFLWYTLNRKGY 363 (476)
Q Consensus 295 ~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~-~~y-l~~--------~~~~~~~sr~~~~~l~~~~~l~~~g~ 363 (476)
.+ .+|++++++|||+++|.|+|+++++++.++.+... ..| +.. .......+.+....+.+.++++.+..
T Consensus 180 ~~~~~d~~v~s~~K~l~g~~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~l~~al~~l~~ 259 (368)
T PRK13479 180 AELGIDALISSANKCIEGVPGFGFVIARRSELEACKGNSRSLSLDLYDQWAYMEKTGQWRFTPPTHVVAAFYQALLELEE 259 (368)
T ss_pred cccCceEEEecCccccccCCCceEEEECHHHHHHhhcCCCCeeecHHHHHhhhcccCCCCCCCcHHHHHHHHHHHHHHHH
Confidence 33 38999999999999899999999998876655321 111 110 00111124443444566677776644
Q ss_pred h-cHHHHHHHHHHHHHHHHHHHHhcCCeEeecCC--e-eEEEEecCC-----cHHHh-----hceeeccc----CCEEEE
Q 011842 364 K-GFQKEVQKCLRNAHYLKDRLLDAGISAMLNEL--S-STVVFERPQ-----DEEFV-----RRWQLACQ----GNIAHV 425 (476)
Q Consensus 364 ~-g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~--~-~iv~f~~~~-----~~~~~-----~~~~l~~~----~~~lRv 425 (476)
. ++++++++..++++++++.|++.|+..+.++. + .++.|..+. ..++. +++.+... .+.+|+
T Consensus 260 ~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~g~~~~~~~iRi 339 (368)
T PRK13479 260 EGGVPARGARYANNQRTLVAGMRALGFEPLLDAEIQSPIIVTFHAPADPAYDFKEFYERLKEQGFVIYPGKLTQVDTFRI 339 (368)
T ss_pred hhCHHHHHHHHHHHHHHHHHHHHHcCCcccCCchhcCceEEEEECCCCCCcCHHHHHHHHHHCCEEEecCCCCCCCEEEE
Confidence 4 57888899999999999999999876544322 2 234555432 12222 33334221 357899
Q ss_pred EEcCCCCHHHHHHHHHHHHHHHHHH
Q 011842 426 VVMPNVTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 426 ~~~~~~T~edid~~~~~l~~~~~~~ 450 (476)
+++.++|.+|+++++++|+++.+++
T Consensus 340 s~~~~~t~edi~~~l~~L~~~l~~~ 364 (368)
T PRK13479 340 GCIGDVDAADIRRLVAAIAEALYWM 364 (368)
T ss_pred ecCCCCCHHHHHHHHHHHHHHHHHc
Confidence 9888999999999999999887653
No 53
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.94 E-value=2.1e-24 Score=221.93 Aligned_cols=286 Identities=13% Similarity=0.101 Sum_probs=200.3
Q ss_pred HHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCC
Q 011842 138 RQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISG 217 (476)
Q Consensus 138 ~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g 217 (476)
..+..++++.+++++|.+. .++++||++|+..++.+... |+|.|++++++|.++..++++.+.+.+.++
T Consensus 82 ~~~~~~le~~ia~~~g~~~----~ii~~~~~~a~~~~~~~l~~--~gd~vi~~~~~~~s~~~~~~~~~~~~~~~~----- 150 (393)
T TIGR01822 82 QDIHKELEAKIAAFLGTED----TILYASCFDANGGLFETLLG--AEDAIISDALNHASIIDGVRLCKAKRYRYA----- 150 (393)
T ss_pred hHHHHHHHHHHHHHhCCCc----EEEECchHHHHHHHHHHhCC--CCCEEEEeccccHHHHHHHHhcCCceEEeC-----
Confidence 4556667778889999753 78889999999977776654 999999999999999999999888776554
Q ss_pred ccCHHHHHHHHHcC---CCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccc-cccC-CCC
Q 011842 218 EIDCADFKAKLLQN---KDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPF-VKKA-PKV 292 (476)
Q Consensus 218 ~~D~~~Le~~l~~~---~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~-~~~~-~~~ 292 (476)
.+|+++|+++|.+. +.++.+|++++..+++|.+.|+++|+++|++||+ |+++|++|+.+.+.. .... ...
T Consensus 151 ~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~l~~i~~la~~~~~-----~li~De~~~~g~~~~~~~~~~~~~ 225 (393)
T TIGR01822 151 NNDMADLEAQLKEARAAGARHRLIATDGVFSMDGVIAPLDEICDLADKYDA-----LVMVDECHATGFLGPTGRGSHELC 225 (393)
T ss_pred CCCHHHHHHHHHhhhhcCCCceEEEEeCCccCCCCcCCHHHHHHHHHHcCC-----EEEEECCccccCcCCCCCchHHhc
Confidence 36999999999853 1144577777788999999999999999999999 999999997544321 1110 012
Q ss_pred CCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcC-CccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHH
Q 011842 293 SFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSS-NVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQ 371 (476)
Q Consensus 293 ~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~-~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~ 371 (476)
+....+|+++.++||+++ +++.|+++.++++++.+.. ...|. +.++.+.....+...+++.+ +..++..+
T Consensus 226 ~~~~~~di~~~s~sK~l~-g~r~G~~~~~~~~~~~l~~~~~~~~------~~~~~~~~~~~a~~~al~~~--~~~~~~~~ 296 (393)
T TIGR01822 226 GVMGRVDIITGTLGKALG-GASGGFTTARKEVVELLRQRSRPYL------FSNSLPPAVVGASIKVLEML--EASNELRD 296 (393)
T ss_pred CCCCCCeEEEEEChHHhh-CCCcEEEEeCHHHHHHHHHhCccce------ecCCCCHHHHHHHHHHHHHH--hcCHHHHH
Confidence 222248999999999987 4688999988877665532 12222 12232211122233344333 33566778
Q ss_pred HHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecCC---cHHHh-----hceeec--------ccCCEEEEEEcCCCCHHH
Q 011842 372 KCLRNAHYLKDRLLDAGISAMLNELSSTVVFERPQ---DEEFV-----RRWQLA--------CQGNIAHVVVMPNVTIDK 435 (476)
Q Consensus 372 ~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~---~~~~~-----~~~~l~--------~~~~~lRv~~~~~~T~ed 435 (476)
+..++++++.+.|++.|+... ++..+++.+..++ ..++. ++..+. .....+|++++..+|++|
T Consensus 297 ~~~~~~~~l~~~L~~~g~~~~-~~~~~~~~i~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~iRis~~~~~t~ed 375 (393)
T TIGR01822 297 RLWANTRYFRERMEAAGFDIK-PADHPIIPVMLYDAVLAQRFARRLLEEGIYVTGFFYPVVPKGQARIRVQISAAHTEEQ 375 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCCC-CCCCCEEEEEeCCHHHHHHHHHHHHHCCeeEeeeCCCCCCCCCceEEEEECCCCCHHH
Confidence 889999999999998876533 3344555555443 22232 222222 122468999999999999
Q ss_pred HHHHHHHHHHHHHH
Q 011842 436 LDDFLNELIENRST 449 (476)
Q Consensus 436 id~~~~~l~~~~~~ 449 (476)
|++++++|+++.++
T Consensus 376 i~~~~~~l~~~~~~ 389 (393)
T TIGR01822 376 LDRAVEAFTRIGRE 389 (393)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999988764
No 54
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.94 E-value=1.5e-24 Score=219.88 Aligned_cols=250 Identities=16% Similarity=0.104 Sum_probs=189.8
Q ss_pred hHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhh--CCC-cEEEecCCCchHHHHHH---HHcCCeEEE
Q 011842 137 SRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREV--FPD-GILYASRESHYSVFKAA---RMYRMECVK 210 (476)
Q Consensus 137 ~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~--~p~-~~Vl~s~~~H~S~~~~~---~~~G~~v~~ 210 (476)
..++.+++++++++++|.+++ .+++|+|+|+++..++.+.... .++ +.|+++..+|+|+.... +..|++++.
T Consensus 40 ~~~~~~~~r~~la~~~g~~~~--~v~~~~g~t~a~~~~l~~l~~~~~~~g~~~vi~~~~~~~s~~~~~~~~~~~G~~v~~ 117 (353)
T TIGR03235 40 AKKAVERARKQVAEALGADTE--EVIFTSGATESNNLAILGLARAGEQKGKKHIITSAIEHPAVLEPIRALERNGFTVTY 117 (353)
T ss_pred HHHHHHHHHHHHHHHhCCCCC--eEEEeCCHHHHHHHHHHHHHHhcccCCCCeeeEcccccHHHHHHHHHHHhcCCEEEE
Confidence 446778899999999999754 4999999999999888776532 244 78999999999876543 446999999
Q ss_pred EeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCC
Q 011842 211 VDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAP 290 (476)
Q Consensus 211 v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~ 290 (476)
++.++++.+|+++|++++.+++ .+|++++++|++|.+.|+++|.++|+++|+ |+|+|++|+.+..+
T Consensus 118 v~~~~~~~~d~~~l~~~l~~~~---~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~-----~~ivD~a~~~g~~~------ 183 (353)
T TIGR03235 118 LPVDESGRIDVDELADAIRPDT---LLVSIMHVNNETGSIQPIREIAEVLEAHEA-----FFHVDAAQVVGKIT------ 183 (353)
T ss_pred EccCCCCcCCHHHHHHhCCCCC---EEEEEEcccCCceeccCHHHHHHHHHHcCC-----EEEEEchhhcCCcc------
Confidence 9998889999999999997654 488899999999999999999999999999 99999999877665
Q ss_pred CCCCcc-cccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCC--CCcccCCCCChhHHHHHHHHHHhChhcHH
Q 011842 291 KVSFKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASR--DATIMGSRNGHAPIFLWYTLNRKGYKGFQ 367 (476)
Q Consensus 291 ~~~~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~--~~~~~~sr~~~~~l~~~~~l~~~g~~g~~ 367 (476)
++..+ .+|++++++|||+ +|.++|+++++++........+.+.... .....++.+....+++..+++.+ .++.+
T Consensus 184 -~~~~~~~~D~~~~s~~K~~-gp~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~-~~~~~ 260 (353)
T TIGR03235 184 -VDLSADRIDLISCSGHKIY-GPKGIGALVIRKRGKPKAPLKPIMFGGGQERGLRPGTLPVHLIVGMGEAAEIA-RRNAQ 260 (353)
T ss_pred -ccccccCCCEEEeehhhcC-CCCceEEEEEccCcccccccCceeeCCCCcCccccCCCChHHHHHHHHHHHHH-HhhHH
Confidence 34443 3999999999996 5999999999987432211122222111 11123555545556666677665 35788
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCeEeecCC---eeEEEEecC
Q 011842 368 KEVQKCLRNAHYLKDRLLDAGISAMLNEL---SSTVVFERP 405 (476)
Q Consensus 368 ~~~~~~~~~a~~l~~~L~~~g~~~~~~~~---~~iv~f~~~ 405 (476)
++.++..++++++++.|++.|+..+.++. ..++.|..+
T Consensus 261 ~~~~~~~~l~~~l~~~l~~~g~~~~~~~~~~~~~i~~~~~~ 301 (353)
T TIGR03235 261 AWEVKLRAMRNQLRDALQTLGVKLNGDPAETIPHILNFSID 301 (353)
T ss_pred HHHHHHHHHHHHHHHHhccCCeEEeCCcccccCCEEEEEeC
Confidence 89999999999999999887776553332 346667655
No 55
>PRK07179 hypothetical protein; Provisional
Probab=99.94 E-value=4.1e-24 Score=220.85 Aligned_cols=280 Identities=16% Similarity=0.135 Sum_probs=200.2
Q ss_pred HHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCcc
Q 011842 140 FEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGEI 219 (476)
Q Consensus 140 le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~ 219 (476)
...++.+.+++++|.+. .++|+||++||..++.+... +++.|+++...|.|+...++..|++++.++. .
T Consensus 100 ~~~~le~~la~~~g~~~----~~~~~sG~~An~~~l~~l~~--~g~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-----~ 168 (407)
T PRK07179 100 PKPQFEKKLAAFTGFES----CLLCQSGWAANVGLLQTIAD--PNTPVYIDFFAHMSLWEGVRAAGAQAHPFRH-----N 168 (407)
T ss_pred HHHHHHHHHHHHhCCCc----EEEECCHHHHHHHHHHHhCC--CCCEEEEECCcCHHHHHHHHHCCCeEEEecC-----C
Confidence 44555567888888863 68899999999999988765 7899999999999999999999998877654 4
Q ss_pred CHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCccccccc-cccc-CCCCCCccc
Q 011842 220 DCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMP-FVKK-APKVSFKKP 297 (476)
Q Consensus 220 D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~-~~~~-~~~~~~~~~ 297 (476)
|+++|+++|.+++ +.+|++.++.+++|.+.|+++|.++|++||+ ++|+|++|+.+... .... ...++....
T Consensus 169 d~~~l~~~l~~~~--~~lV~v~~v~n~tG~i~pl~~I~~l~~~~~~-----~livDea~~~g~~g~~g~g~~~~~~~~~~ 241 (407)
T PRK07179 169 DVDHLRRQIERHG--PGIIVVDSVYSTTGTIAPLADIVDIAEEFGC-----VLVVDESHSLGTHGPQGAGLVAELGLTSR 241 (407)
T ss_pred CHHHHHHHHHhcC--CeEEEECCCCCCCCccccHHHHHHHHHHcCC-----EEEEECcccccCcCCCCCchHHhcCCCCC
Confidence 9999999997642 3478788899999999999999999999999 99999999754331 1111 001222234
Q ss_pred ccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCc-cccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHHHH
Q 011842 298 IGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNV-EYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRN 376 (476)
Q Consensus 298 ~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~-~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~ 376 (476)
+|+++.|+||+++. ++|++++++++++.+.... .+. +.++........+.++++.+ ....+..++..++
T Consensus 242 vdi~~~S~sK~~g~--~~G~l~~~~~~~~~~~~~~~~~~------~~~t~~~~~~aa~~aal~~~--~~~~~~~~~l~~~ 311 (407)
T PRK07179 242 VHFITASLAKAFAG--RAGIITCPRELAEYVPFVSYPAI------FSSTLLPHEIAGLEATLEVI--ESADDRRARLHAN 311 (407)
T ss_pred CCEEEeechHhhhc--cCeEEEeCHHHHHHHHHhCcCee------eCCCCCHHHHHHHHHHHHHH--hcCHHHHHHHHHH
Confidence 79999999999973 5999999887655442211 111 12222222222333445544 2235677889999
Q ss_pred HHHHHHHHHhcCCeEeecCCeeEEEEecCCc---HHHh-----hceee-----cc---cCCEEEEEEcCCCCHHHHHHHH
Q 011842 377 AHYLKDRLLDAGISAMLNELSSTVVFERPQD---EEFV-----RRWQL-----AC---QGNIAHVVVMPNVTIDKLDDFL 440 (476)
Q Consensus 377 a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~~---~~~~-----~~~~l-----~~---~~~~lRv~~~~~~T~edid~~~ 440 (476)
+++|++.|++.|+... ..++++.+..+.. ..+. +++.. +. ..+.+|++++..+|++||++++
T Consensus 312 ~~~l~~~L~~~g~~v~--~~~~i~~l~~~~~~~~~~~~~~L~~~GI~~~~~~~p~~~~~~~~lRis~~~~~t~edi~~~~ 389 (407)
T PRK07179 312 ARFLREGLSELGYNIR--SESQIIALETGSERNTEVLRDALEERNVFGAVFCAPATPKNRNLIRLSLNADLTASDLDRVL 389 (407)
T ss_pred HHHHHHHHHHcCCCCC--CCCCEEEEEeCCHHHHHHHHHHHHHCCceEeeecCCCCCCCCceEEEEECCCCCHHHHHHHH
Confidence 9999999999876433 3356666665431 2221 22221 11 2468999999999999999999
Q ss_pred HHHHHHHHH
Q 011842 441 NELIENRST 449 (476)
Q Consensus 441 ~~l~~~~~~ 449 (476)
++|+++.++
T Consensus 390 ~~l~~~~~~ 398 (407)
T PRK07179 390 EVCREARDE 398 (407)
T ss_pred HHHHHHHHh
Confidence 999988765
No 56
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.94 E-value=2.4e-24 Score=238.90 Aligned_cols=339 Identities=15% Similarity=0.102 Sum_probs=230.9
Q ss_pred ccCCCCcCCcchHHHHHHHHHhh-CCCCCCcccCccchhhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHH
Q 011842 99 HLGYPYNLDFDYGALAQLQHFSI-NNLGDPFIESNYGVHSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILV 177 (476)
Q Consensus 99 ~~g~p~~~~~~~~~l~~~l~~~~-n~~g~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~a 177 (476)
|+-|..........+.+++.... +..+++...+..+..+.++.+++++.+++++|.+++++.++||+|+|+|+.++...
T Consensus 37 YLD~Aatt~~~~~~V~~~~~~~~~~~~~np~s~~~~s~~~~~~~e~aR~~ia~~lga~~~~~~VvFtsnaT~alnlva~~ 116 (805)
T PLN02724 37 YLDHAGATLYSESQLEAALADFSSNVYGNPHSQSDSSMRSSDTIESARQQVLEYFNAPPSDYACVFTSGATAALKLVGET 116 (805)
T ss_pred eEeCCCCCCCCHHHHHHHHHHHHhhccCCCCcCcchhhhHHHHHHHHHHHHHHHhCCCccceEEEEeCChHHHHHHHHHH
Confidence 44433332223345555554332 22333332233344567788899999999999976555689999999998877655
Q ss_pred HHhhCCCcEEEecCCCchHHHH---HHHHcCCeEEEEeCC--------CCCccCH--HHHHHHHHc----C---CCCcEE
Q 011842 178 GREVFPDGILYASRESHYSVFK---AARMYRMECVKVDCL--------ISGEIDC--ADFKAKLLQ----N---KDKPAI 237 (476)
Q Consensus 178 a~~~~p~~~Vl~s~~~H~S~~~---~~~~~G~~v~~v~~~--------~~g~~D~--~~Le~~l~~----~---~~~p~~ 237 (476)
.. ..++++|+++...|.|+.. .++..|++++.++.+ ..+.+|+ ++|++.+.. . +.+..+
T Consensus 117 l~-~~~gd~Iv~t~~eH~svl~~~~~a~~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t~L 195 (805)
T PLN02724 117 FP-WSSESHFCYTLENHNSVLGIREYALEKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAYNL 195 (805)
T ss_pred CC-CCCCCeEEEeeccccchHHHHHHHHHcCCeEEeccchhccccccccccccccchhhhhhhhhhhhccccccCCCcce
Confidence 42 3478999999999988653 334459999999876 3455554 667776421 0 122349
Q ss_pred EEEeeCCCccccccCHHHHHHHHHHhCCC--C-CceEEEEecCcccccccccccCCCCCCccc-ccEEEEcCCCCCCCCC
Q 011842 238 INVNIGTTVKGAVDDLDLVIQTLEESGFT--Q-DRFYIHCDGALFGLMMPFVKKAPKVSFKKP-IGSVSVSGHKFVGCPM 313 (476)
Q Consensus 238 vv~t~gtt~tG~id~l~~I~~ia~~~g~~--~-~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~-~Dsi~~s~hK~l~~p~ 313 (476)
|++++.++.+|.+.|+++|.++++..+.. . ...++++|+||+.+..| +++.+. +|++++|+|||++.|.
T Consensus 196 Va~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~g~~p-------iDv~~~~~Dfl~~S~HK~~GgP~ 268 (805)
T PLN02724 196 FAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGCGTSP-------PDLSRYPADFVVVSFYKIFGYPT 268 (805)
T ss_pred EEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhcCCCC-------CChhhcCCCEEEEecceeccCCC
Confidence 99999999999999999876555533100 0 01279999999988877 666554 9999999999999999
Q ss_pred CceeEEeehhhhhhhcCCccccCCC-------------------CCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHH
Q 011842 314 PCGVQITRMEHINVLSSNVEYLASR-------------------DATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCL 374 (476)
Q Consensus 314 ~~G~l~~~~~~~~~l~~~~~yl~~~-------------------~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~ 374 (476)
|+|+|++++++.+.+.. .|.++. ..--.||.+....+++.++++.+...|++++.++..
T Consensus 269 G~G~L~vr~~~~~~l~p--~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~aal~~l~~ig~~~I~~~~~ 346 (805)
T PLN02724 269 GLGALLVRRDAAKLLKK--KYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALRHGFKLLNRLTISAIAMHTW 346 (805)
T ss_pred CceEEEEehhhhhhhcC--CccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHHHHHHHHHHhChHHHHHHHH
Confidence 99999999886554421 122110 011246676666777888888887778999999999
Q ss_pred HHHHHHHHHHHhcC------CeEeecC---------CeeEEEEecCCc-------H---HHhh--ceee----cc-----
Q 011842 375 RNAHYLKDRLLDAG------ISAMLNE---------LSSTVVFERPQD-------E---EFVR--RWQL----AC----- 418 (476)
Q Consensus 375 ~~a~~l~~~L~~~g------~~~~~~~---------~~~iv~f~~~~~-------~---~~~~--~~~l----~~----- 418 (476)
+++++|.+.|++.+ ...+..+ ..++|+|...+. . .+.. ++.+ .|
T Consensus 347 ~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~~~~v~~~~v~~l~~~~gI~vR~G~~Ca~~~~ 426 (805)
T PLN02724 347 ALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRADGSWVGHREVEKLASLSGIQLRTGCFCNPGAC 426 (805)
T ss_pred HHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCcccccCEEEEEEEcCCCCEeCHHHHHHHHHhcCcEEeeccccCchHH
Confidence 99999999999874 2333322 247888875421 1 1111 1111 00
Q ss_pred -------------------------------cCCEEEEEEcCCCCHHHHHHHHHHHHHHH
Q 011842 419 -------------------------------QGNIAHVVVMPNVTIDKLDDFLNELIENR 447 (476)
Q Consensus 419 -------------------------------~~~~lRv~~~~~~T~edid~~~~~l~~~~ 447 (476)
..+.+|+|+.+++|.+|||+|+++|++..
T Consensus 427 ~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~~~ 486 (805)
T PLN02724 427 AKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFIISSF 486 (805)
T ss_pred HHHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcCccCCHHHHHHHHHHHHHHh
Confidence 12679999999999999999999998865
No 57
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.94 E-value=6.2e-24 Score=214.60 Aligned_cols=325 Identities=13% Similarity=0.057 Sum_probs=218.4
Q ss_pred HHhcccccccCCCCcCCcchHHHHHHHHHhhCCCCCCcccCccchhhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhH
Q 011842 91 TLMERTKHHLGYPYNLDFDYGALAQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELENNEYWGYITNCGTEG 170 (476)
Q Consensus 91 ~~~~~~~~~~g~p~~~~~~~~~l~~~l~~~~n~~g~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~A 170 (476)
++.++.+.|+|++..... .+++.+.+....++.++ ++...+......++++.+++++|.+. .+++++|+++
T Consensus 3 ~~~~~~~~~~~~~~~~~v-~~a~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~la~~~~~~~----~iv~~sg~~a 73 (349)
T cd06454 3 VLNFCSNDYLGLANHPEV-IEAAKEALDKYGVGAGG----SRLISGTSDLHEELEEELAEFHGKEA----ALVFSSGYAA 73 (349)
T ss_pred ceecccCCccccCCCHHH-HHHHHHHHHHhCCCCCC----cCeecCCchHHHHHHHHHHHHhCCCC----EEEeccHHHH
Confidence 456777889997766332 24444444432222221 11111334677788888999999853 6777888999
Q ss_pred HHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccCHHHHHHHHHcCC--CCcEEEEEeeCCCccc
Q 011842 171 NLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCADFKAKLLQNK--DKPAIINVNIGTTVKG 248 (476)
Q Consensus 171 n~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~~~Le~~l~~~~--~~p~~vv~t~gtt~tG 248 (476)
+..++.++.. ||+.|+++++.|+++...++..|++++.++. +|++++++++.+.. .++.+|+++++++++|
T Consensus 74 ~~~~~~~~~~--~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-----~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG 146 (349)
T cd06454 74 NDGVLSTLAG--KGDLIISDSLNHASIIDGIRLSGAKKRIFKH-----NDMEDLEKLLREARRPYGKKLIVTEGVYSMDG 146 (349)
T ss_pred HHHHHHHhcC--CCCEEEEehhhhHHHHHHHHHcCCceEEecC-----CCHHHHHHHHHHhhccCCCeEEEEeccccCCC
Confidence 9988877664 8999999999999999999999999888763 48889999997642 3456888888899999
Q ss_pred cccCHHHHHHHHHHhCCCCCceEEEEecCccccccc-ccccCCCCCCc-ccccEEEEcCCCCCCCCCCceeEEeehhhhh
Q 011842 249 AVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMP-FVKKAPKVSFK-KPIGSVSVSGHKFVGCPMPCGVQITRMEHIN 326 (476)
Q Consensus 249 ~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~-~~~~~~~~~~~-~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~ 326 (476)
.+.|+++|+++|++||+ ++++|++|+.+.++ .......+... ...|+++.++||+++. ..|+++.+++..+
T Consensus 147 ~~~~~~~i~~~~~~~~~-----~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~--~gG~i~~~~~~~~ 219 (349)
T cd06454 147 DIAPLPELVDLAKKYGA-----ILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGA--VGGYIAGSKELID 219 (349)
T ss_pred CccCHHHHHHHHHHcCC-----EEEEEccccccccCCCCCChhhhccccccCcEEEeechhhhcc--cCCEEECCHHHHH
Confidence 99999999999999999 99999999754332 11111112222 2479999999999985 3388888877655
Q ss_pred hhcCC-ccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecC
Q 011842 327 VLSSN-VEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERP 405 (476)
Q Consensus 327 ~l~~~-~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~ 405 (476)
.+... ..|. ..++.+......+.++++.... ..+..++..++++++.+.|++.|+..+.++...+..+..+
T Consensus 220 ~~~~~~~~~~------~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~ 291 (349)
T cd06454 220 YLRSYARGFI------FSTSLPPAVAAAALAALEVLQG--GPERRERLQENVRYLRRGLKELGFPVGGSPSHIIPPLIGD 291 (349)
T ss_pred HHHHhchhhh------ccCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCcEEEEeCC
Confidence 44321 1121 1122222223344455554422 4667888889999999999988765544444444444433
Q ss_pred C---cHHHh-----hceeecc--------cCCEEEEEEcCCCCHHHHHHHHHHHHHH
Q 011842 406 Q---DEEFV-----RRWQLAC--------QGNIAHVVVMPNVTIDKLDDFLNELIEN 446 (476)
Q Consensus 406 ~---~~~~~-----~~~~l~~--------~~~~lRv~~~~~~T~edid~~~~~l~~~ 446 (476)
+ ..++. ++..+.. .++.+|++++.++|+++|++++++|+++
T Consensus 292 ~~~~~~~~~~~L~~~gI~~~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 292 DPAKAVAFSDALLERGIYVQAIRYPTVPRGTARLRISLSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred ChHHHHHHHHHHHhCCceEEEecCCccCCCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 1 12222 2222211 1368999999999999999999999865
No 58
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.93 E-value=3.1e-24 Score=220.28 Aligned_cols=324 Identities=12% Similarity=0.105 Sum_probs=221.0
Q ss_pred HHHHHhcccccccCCCCcCCcchHHHHHHHHHhhCCCCCCcccCccchhhHHHHHHHHHHHHHHcCCCCCcccEEEcCCc
Q 011842 88 YRKTLMERTKHHLGYPYNLDFDYGALAQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELENNEYWGYITNCG 167 (476)
Q Consensus 88 ~~~~~~~~~~~~~g~p~~~~~~~~~l~~~l~~~~n~~g~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~g~~t~gg 167 (476)
.++.+.+++++|+| +...+. +.+.....+...|.....++.-.+...+++++.+.+++++|.+. .+++++|
T Consensus 101 ~r~~l~FsSndYLG----L~~~p~-v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~g~e~----all~sSG 171 (476)
T PLN02955 101 FKKLLLFSGNDYLG----LSSHPT-ISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLKKKED----CLVCPTG 171 (476)
T ss_pred CceEEEeeccCccC----CCCCHH-HHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHHCCCc----EEEECCh
Confidence 34567788888999 444322 22222222233333333333333456788888888999999875 8899999
Q ss_pred hhHHHHHHHHHHh------------hCCCcEEEecCCCchHHHHHHHHc----CCeEEEEeCCCCCccCHHHHHHHHHcC
Q 011842 168 TEGNLHGILVGRE------------VFPDGILYASRESHYSVFKAARMY----RMECVKVDCLISGEIDCADFKAKLLQN 231 (476)
Q Consensus 168 t~An~~al~aa~~------------~~p~~~Vl~s~~~H~S~~~~~~~~----G~~v~~v~~~~~g~~D~~~Le~~l~~~ 231 (476)
..||+.++.+... ..+++.|++++..|.|+..++++. +++++.++++ |+++|+++|+..
T Consensus 172 y~AN~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f~HN-----D~~~Le~~L~~~ 246 (476)
T PLN02955 172 FAANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQGNVEVFVYRHC-----DMYHLNSLLSSC 246 (476)
T ss_pred HHHHHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhccccCCceEEEeCCC-----CHHHHHHHHHhC
Confidence 9999998877520 125678999999999999999988 5788889988 999999999876
Q ss_pred CCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccc-cccccCC-CCCCcccccEEEEcCCCCC
Q 011842 232 KDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMM-PFVKKAP-KVSFKKPIGSVSVSGHKFV 309 (476)
Q Consensus 232 ~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~-~~~~~~~-~~~~~~~~Dsi~~s~hK~l 309 (476)
++...+|++....++.|.+.|+++|.++|++||+ ++++|+||+.+++ +..++.. .+.....+|+++.++.|.+
T Consensus 247 ~~~~~~Vv~EgV~SmdGdiapL~eL~~L~~~~ga-----~LiVDEAH~~Gv~G~~G~G~~e~~g~~~di~ii~~TLsKA~ 321 (476)
T PLN02955 247 KMKRKVVVTDSLFSMDGDFAPMEELSQLRKKYGF-----LLVIDDAHGTFVCGENGGGVAEEFNCEADVDLCVGTLSKAA 321 (476)
T ss_pred CCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCc-----EEEEcccccCceecCCCCcHHHHhCCCCCCcEEEEeCccch
Confidence 5545566666669999999999999999999999 9999999986654 3222221 1222234899999999998
Q ss_pred CCCCCceeEEeehhhhhhhc-CCccccCCCCCcccCCCCChhHH--HHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHh
Q 011842 310 GCPMPCGVQITRMEHINVLS-SNVEYLASRDATIMGSRNGHAPI--FLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLD 386 (476)
Q Consensus 310 ~~p~~~G~l~~~~~~~~~l~-~~~~yl~~~~~~~~~sr~~~~~l--~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~ 386 (476)
++ ..|+++++++.++.+. ....|+++. +...++ +..++++.+- . .+.+.++++++.++|++.
T Consensus 322 G~--~GGfi~gs~~~~~~l~~~~~~~ifSt--------alpp~~aaa~laal~l~~-~-~~~~r~~L~~n~~~fr~~--- 386 (476)
T PLN02955 322 GC--HGGFIACSKKWKQLIQSRGRSFIFST--------AIPVPMAAAAYAAVVVAR-K-EKWRRKAIWERVKEFKAL--- 386 (476)
T ss_pred hc--cCceeecHHHHHHHHHHhCCCCeecc--------cccHHHHHHHHHHHHHHh-c-CHHHHHHHHHHHHHHHHh---
Confidence 74 4677777776655442 233444332 111111 1222333331 1 235678888999999874
Q ss_pred cCCeEeecCCeeEEEEecCCcHH---H-----hhceee--------cccCCEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Q 011842 387 AGISAMLNELSSTVVFERPQDEE---F-----VRRWQL--------ACQGNIAHVVVMPNVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 387 ~g~~~~~~~~~~iv~f~~~~~~~---~-----~~~~~l--------~~~~~~lRv~~~~~~T~edid~~~~~l~~~~~~ 449 (476)
.|+.. .++|+.+..++... + .+++.+ +....++|++++..+|++|||+++++|.++...
T Consensus 387 ~G~~~----~sPI~pI~ig~~~~a~~~~~~L~~~Gi~v~~i~yPtVP~g~~rLRi~lsA~Ht~edId~lv~~L~~~~~~ 461 (476)
T PLN02955 387 SGVDI----SSPIISLVVGNQEKALKASRYLLKSGFHVMAIRPPTVPPNSCRLRVTLSAAHTTEDVKKLITALSSCLDF 461 (476)
T ss_pred cCCCC----CCCEEEEEeCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCceEEEeeCCCCCHHHHHHHHHHHHHHHhh
Confidence 35431 36777777664321 1 233433 334568999999999999999999999888654
No 59
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.93 E-value=9.8e-24 Score=220.53 Aligned_cols=293 Identities=13% Similarity=0.064 Sum_probs=204.3
Q ss_pred hHHHHHHHHHHHHHHcCCCCCcccEEEc---CCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHH----------
Q 011842 137 SRQFEVGVLDWFARLWELENNEYWGYIT---NCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARM---------- 203 (476)
Q Consensus 137 ~~~le~~~~~~la~l~g~~~~~~~g~~t---~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~---------- 203 (476)
...+|+.+++.+++++|.++++ .+++ ++||+||+.++.+... |++.|++++..|.+....+..
T Consensus 78 ~~~iE~~ar~~~a~lf~a~~~~--~~~~~~~~sgt~an~~v~~al~~--~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~ 153 (452)
T PTZ00094 78 VDKIENLCQKRALEAFGLDPEE--WGVNVQPYSGSPANFAVYTALLQ--PHDRIMGLDLPSGGHLTHGFYTAKKKVSATS 153 (452)
T ss_pred HHHHHHHHHHHHHHHhCCCccc--ceeecCCCchHHHHHHHHHHhcC--CCCEEEecccccCCcccccccccccccccce
Confidence 3566667889999999997543 4455 7899999998888754 899999999999876543321
Q ss_pred cCCeEEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccc
Q 011842 204 YRMECVKVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMM 283 (476)
Q Consensus 204 ~G~~v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~ 283 (476)
.++++..++++.+|.+|+++|++++.+.. |.+|+++ .+.+|.+.|+++|.++|+++|+ ++|||++|+.+.+
T Consensus 154 ~~~~~~~~~~~~~g~id~~~L~~~l~~~~--~~lvi~~--~s~~g~~~di~~I~~i~~~~ga-----~l~vDaaq~~G~i 224 (452)
T PTZ00094 154 IYFESLPYQVNEKGLIDYDKLEELAKAFR--PKLIIAG--ASAYPRDIDYKRFREICDSVGA-----YLMADIAHTSGLV 224 (452)
T ss_pred eeeeeeecccCCCCCcCHHHHHHHHHHhC--CCEEEEe--CCCCCCccCHHHHHHHHHHcCC-----EEEEeccchhccc
Confidence 12345566677779999999999997532 2255442 3468999999999999999999 9999999998877
Q ss_pred cccccCCCCCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCc-cccCCCCCcccCCCCChhHHHHHHHHHHhC
Q 011842 284 PFVKKAPKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNV-EYLASRDATIMGSRNGHAPIFLWYTLNRKG 362 (476)
Q Consensus 284 ~~~~~~~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~-~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g 362 (476)
+..... ... ..+|++++++|||+++|.+ |+++++++..+.+.... ..++ ..+.|+.+.....++.++++.+.
T Consensus 225 ~~~~~~--~~~-~~~D~l~~S~hK~l~GP~G-g~l~~~~~~~~~l~~~~~~~~~---p~~~G~~~~~~iaal~~al~~~~ 297 (452)
T PTZ00094 225 AAGVLP--SPF-PYADVVTTTTHKSLRGPRS-GLIFYRKKVKPDIENKINEAVF---PGLQGGPHNHQIAAIAVQLKEVQ 297 (452)
T ss_pred cCCCCC--CCC-CCCcEEEcCCccCCCCCCc-eEEEEecccchHHHHhhccccC---CCCCCCchHHHHHHHHHHHHHHh
Confidence 532211 111 2589999999999998997 88888765433221110 1111 12334444344556667777775
Q ss_pred hhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecC-Ce--eEEEEecCC-c-HHH---hh--ceeec-----c-----cCCE
Q 011842 363 YKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNE-LS--STVVFERPQ-D-EEF---VR--RWQLA-----C-----QGNI 422 (476)
Q Consensus 363 ~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~-~~--~iv~f~~~~-~-~~~---~~--~~~l~-----~-----~~~~ 422 (476)
..+++++.++..+++++|.+.|++.|+.+..+. .+ .++.|..++ + ..+ .+ ++.+. + ..+.
T Consensus 298 ~~~~~~~~~~i~~l~~~l~~~L~~~g~~v~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~vs~~~~p~~~~~~~~~~ 377 (452)
T PTZ00094 298 SPEWKEYAKQVLKNAKALAAALEKRGYDLVTGGTDNHLVLVDLRPFGITGSKMEKLLDAVNISVNKNTIPGDKSALNPSG 377 (452)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHhCCcEEecCCCCCceEeecCCcCCCCHHHHHHHHHHCCcEEecccCCCCCcCCCCCe
Confidence 667888899999999999999988887655422 12 344454332 2 222 12 33332 2 2368
Q ss_pred EEEEEcCCCC----HHHHHHHHHHHHHHHHH
Q 011842 423 AHVVVMPNVT----IDKLDDFLNELIENRST 449 (476)
Q Consensus 423 lRv~~~~~~T----~edid~~~~~l~~~~~~ 449 (476)
+|++++..+| ++||+++++.|.++++.
T Consensus 378 vRis~~~~tt~g~~~~di~~l~~~l~~~~~~ 408 (452)
T PTZ00094 378 VRLGTPALTTRGAKEKDFKFVADFLDRAVKL 408 (452)
T ss_pred EEECCHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 9999977776 99999999999998864
No 60
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.93 E-value=3e-23 Score=214.13 Aligned_cols=331 Identities=14% Similarity=0.100 Sum_probs=216.8
Q ss_pred HHHhcccccccCCCCcCCcchHHHHHHHHHhhCCCCCCcccCccchhhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchh
Q 011842 90 KTLMERTKHHLGYPYNLDFDYGALAQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELENNEYWGYITNCGTE 169 (476)
Q Consensus 90 ~~~~~~~~~~~g~p~~~~~~~~~l~~~l~~~~n~~g~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~ 169 (476)
+.+...+++|+|... ++.....+.. .++..|.....++.-.+......++.+.+++++|.+. .+++++|++
T Consensus 46 ~~~~~~sn~ylgl~~----~p~v~~a~~~-~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~g~~~----~l~~~sG~~ 116 (402)
T TIGR01821 46 DVTVWCSNDYLGMGQ----HPEVLQAMHE-TLDKYGAGAGGTRNISGTNIPHVELEAELADLHGKES----ALVFTSGYV 116 (402)
T ss_pred eEEEeEccCcCCCCC----CHHHHHHHHH-HHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHhCCCe----EEEECchHH
Confidence 356778888999443 3233333322 2222221111111111223556677788889898642 678888999
Q ss_pred HHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccCHHHHHHHHHcCC-CCcEEEEEeeCCCccc
Q 011842 170 GNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCADFKAKLLQNK-DKPAIINVNIGTTVKG 248 (476)
Q Consensus 170 An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~~~Le~~l~~~~-~~p~~vv~t~gtt~tG 248 (476)
||..++.++....++++|+++...|.++...++..|+++..++++ |+++|++.+.... +++.+|+++++.+++|
T Consensus 117 an~~ai~~l~~~~~~~~v~~~~~~h~s~~~~~~~~g~~~~~~~~~-----d~~~l~~~l~~~~~~~~~~v~~e~~~~~~G 191 (402)
T TIGR01821 117 ANDATLATLAKIIPGCVIFSDELNHASMIEGIRHSGAEKFIFRHN-----DVAHLEKLLQSVDPNRPKIIAFESVYSMDG 191 (402)
T ss_pred HHHHHHHHhhCCCCCCEEEEcchHhHHHHHHHHHcCCeEEEECCC-----CHHHHHHHHHhccCCCCeEEEEcCCCCCCC
Confidence 999999887654478888888889999999999999988777654 8889999887432 2456888889999999
Q ss_pred cccCHHHHHHHHHHhCCCCCceEEEEecCccccc-ccccccCC-CCCCcccccEEEEcCCCCCCCCCCceeEEeehhhhh
Q 011842 249 AVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLM-MPFVKKAP-KVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHIN 326 (476)
Q Consensus 249 ~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~-~~~~~~~~-~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~ 326 (476)
.+.|+++|.++|++||+ ++++|+||+.+. .+...... .......+|++..++.|.++.+ .|+++.++++++
T Consensus 192 ~~~~l~~i~~l~~~~~~-----~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~--GG~i~~~~~~~~ 264 (402)
T TIGR01821 192 DIAPIEEICDLADKYGA-----LTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAFGVV--GGYIAASRKLID 264 (402)
T ss_pred CccCHHHHHHHHHHcCC-----EEEEeCcccccccCCCCCccchhccCCCCCeEEEEechhhhccC--CceeecCHHHHH
Confidence 99999999999999999 999999998443 23222211 1122223688888999999852 277877877665
Q ss_pred hhcC-CccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecC
Q 011842 327 VLSS-NVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERP 405 (476)
Q Consensus 327 ~l~~-~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~ 405 (476)
.+.. ...|. +..+.+.....+..++++.+... ....++..+++++|.+.|++.|+..+ ++.++++.+..+
T Consensus 265 ~l~~~~~~~~------~t~~~~~~~~aaa~aaL~~~~~~--~~~~~~~~~~~~~l~~~L~~~g~~~~-~~~~~i~~i~~~ 335 (402)
T TIGR01821 265 AIRSYAPGFI------FTTSLPPAIAAGATASIRHLKES--QDLRRAHQENVKRLKNLLEALGIPVI-PNPSHIVPVIIG 335 (402)
T ss_pred HHHHhCcCce------ecCcCCHHHHHHHHHHHHHhhcC--HHHHHHHHHHHHHHHHHHHHcCCCcC-CCCCCEEEEEeC
Confidence 5532 11221 11122211222233444443222 44556667899999999999886533 445667666554
Q ss_pred Cc---HHH----h-h-ceeec--------ccCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 011842 406 QD---EEF----V-R-RWQLA--------CQGNIAHVVVMPNVTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 406 ~~---~~~----~-~-~~~l~--------~~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~ 450 (476)
.. .++ . + ++.+. ....++|++++..+|++|||+++++|+++.+++
T Consensus 336 ~~~~a~~~~~~L~~~~Gi~v~~~~~p~~~~g~~~lRis~~~~~t~edi~~~~~~l~~~~~~~ 397 (402)
T TIGR01821 336 DAALCKKVSDLLLNKHGIYVQPINYPTVPRGTERLRITPTPAHTDKMIDDLVEALLLVWDRL 397 (402)
T ss_pred CHHHHHHHHHHHHhcCCEEEEeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Confidence 31 222 1 2 33332 123689999999999999999999999987653
No 61
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.93 E-value=7.7e-23 Score=203.73 Aligned_cols=301 Identities=15% Similarity=0.146 Sum_probs=238.6
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchH--HHHHHHHcCCeEEEEeC
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYS--VFKAARMYRMECVKVDC 213 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S--~~~~~~~~G~~v~~v~~ 213 (476)
....+.+++.+.+..+++.+. ....+++++||.|+-.++..... ||+.|++....-++ |.+.++.+|++++.+..
T Consensus 35 ~F~~~~~~~~~~L~~v~~t~~-~~~~ll~gsGt~amEAav~sl~~--pgdkVLv~~nG~FG~R~~~ia~~~g~~v~~~~~ 111 (383)
T COG0075 35 DFVGIMKEVLEKLRKVFGTEN-GDVVLLSGSGTLAMEAAVASLVE--PGDKVLVVVNGKFGERFAEIAERYGAEVVVLEV 111 (383)
T ss_pred HHHHHHHHHHHHHHHHhcCCC-CcEEEEcCCcHHHHHHHHHhccC--CCCeEEEEeCChHHHHHHHHHHHhCCceEEEeC
Confidence 466888999999999999873 23356667888888888877776 89999888887766 67899999999999998
Q ss_pred CCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCC
Q 011842 214 LISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVS 293 (476)
Q Consensus 214 ~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~ 293 (476)
.+.-.+|+++++++|++++. ..+|.++|..|.||...|+++|+++|++||. +++||++-+.+..+ ++
T Consensus 112 ~wg~~v~p~~v~~~L~~~~~-~~~V~~vH~ETSTGvlnpl~~I~~~~k~~g~-----l~iVDaVsS~Gg~~-------~~ 178 (383)
T COG0075 112 EWGEAVDPEEVEEALDKDPD-IKAVAVVHNETSTGVLNPLKEIAKAAKEHGA-----LLIVDAVSSLGGEP-------LK 178 (383)
T ss_pred CCCCCCCHHHHHHHHhcCCC-ccEEEEEeccCcccccCcHHHHHHHHHHcCC-----EEEEEecccCCCcc-------cc
Confidence 87778999999999996643 3478899999999999999999999999999 99999998755555 55
Q ss_pred Cccc-ccEEEEcCCCCCCCCCCceeEEeehhhhhhhcC--Cc-cccCC-------CC-CcccCCCCChhHHHHHHHHHHh
Q 011842 294 FKKP-IGSVSVSGHKFVGCPMPCGVQITRMEHINVLSS--NV-EYLAS-------RD-ATIMGSRNGHAPIFLWYTLNRK 361 (476)
Q Consensus 294 ~~~~-~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~--~~-~yl~~-------~~-~~~~~sr~~~~~l~~~~~l~~~ 361 (476)
..+. +|++...++|.+++|+|.|++.++++.++.+.. .+ -|+.- .+ ..+..|.+....+++..+++.+
T Consensus 179 vd~wgiDv~itgSQK~l~~PPGla~v~~S~~a~e~~~~~~~~~~ylDL~~~~~~~~~~~~~p~Tppv~~i~aL~~al~~i 258 (383)
T COG0075 179 VDEWGIDVAITGSQKALGAPPGLAFVAVSERALEAIEERKHPSFYLDLKKWLKYMEKKGSTPYTPPVNLIYALREALDLI 258 (383)
T ss_pred hhhcCccEEEecCchhccCCCccceeEECHHHHHHHhcCCCCceeecHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHH
Confidence 5554 999999999999999999999999987665532 22 34331 11 3455666666667788889999
Q ss_pred ChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCC--e-eEEEEecCCc---HHH----hhceee-------cccCCEEE
Q 011842 362 GYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNEL--S-STVVFERPQD---EEF----VRRWQL-------ACQGNIAH 424 (476)
Q Consensus 362 g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~--~-~iv~f~~~~~---~~~----~~~~~l-------~~~~~~lR 424 (476)
..+|++++++|.+.+++++++.+++.|+..+..+. + .+.++..|.+ ... .+++.+ +..+..+|
T Consensus 259 ~~EGle~r~~RH~~~~~a~r~~~~alGl~~~~~~~~~s~tvta~~~P~g~~~~~~~~~~~~~~g~~i~gg~~~l~gkifR 338 (383)
T COG0075 259 LEEGLEARIARHRRLAEALRAGLEALGLELFADPERRSPTVTAIKVPEGVDDKKVRRALLKEYGVEIAGGQGPLKGKIFR 338 (383)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHcCCccccCcccCCCceEEEECCCCCCcHHHHHHHHHhCCEEecccccccCccEEE
Confidence 89999999999999999999999999998776332 3 4455666642 111 223332 23457999
Q ss_pred EEEcCCCCHHHHHHHHHHHHHHHHHHHh
Q 011842 425 VVVMPNVTIDKLDDFLNELIENRSTWYE 452 (476)
Q Consensus 425 v~~~~~~T~edid~~~~~l~~~~~~~~~ 452 (476)
|..|-+.+.+|+...+.+|+.+.+++..
T Consensus 339 IGhMG~~~~~dv~~~l~ale~~L~~~g~ 366 (383)
T COG0075 339 IGHMGNVRPEDVLAALAALEAALRELGV 366 (383)
T ss_pred EecCccCCHHHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999999999887643
No 62
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.92 E-value=7.8e-23 Score=211.34 Aligned_cols=331 Identities=14% Similarity=0.106 Sum_probs=217.8
Q ss_pred HHHhcccccccCCCCcCCcchHHHHHHHHHhhCCCCCCcccCccchhhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchh
Q 011842 90 KTLMERTKHHLGYPYNLDFDYGALAQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELENNEYWGYITNCGTE 169 (476)
Q Consensus 90 ~~~~~~~~~~~g~p~~~~~~~~~l~~~l~~~~n~~g~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~ 169 (476)
+.+...+++|+|++.++ .....+.. .+...+.....++...+......++.+.+++++|.+. .+++++|++
T Consensus 47 ~~~~~~s~dylgl~~~p----~v~~a~~~-~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~g~~~----~~~~~sG~~ 117 (407)
T PRK09064 47 EVTVWCSNDYLGMGQHP----KVIEAMIE-ALDRCGAGAGGTRNISGTNHYHVELERELADLHGKEA----ALVFTSGYV 117 (407)
T ss_pred eEEEEECCCCcCCCCCH----HHHHHHHH-HHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHhCCCc----EEEECcHHH
Confidence 35677788899955543 22222222 2222221111111111224566777788888888542 677788899
Q ss_pred HHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccCHHHHHHHHHcCC-CCcEEEEEeeCCCccc
Q 011842 170 GNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCADFKAKLLQNK-DKPAIINVNIGTTVKG 248 (476)
Q Consensus 170 An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~~~Le~~l~~~~-~~p~~vv~t~gtt~tG 248 (476)
||..++..++...+++.|+.+...|.|+...++..|+++..++.+ |+++|++.++..+ .++.+|+++++.+++|
T Consensus 118 an~~ai~~l~~~~~~~~i~~~~~~h~s~~~~~~~~~~~~~~~~~~-----d~~~le~~l~~~~~~~~~~v~~~~v~s~~G 192 (407)
T PRK09064 118 SNDATLSTLAKLIPDCVIFSDELNHASMIEGIRRSRCEKHIFRHN-----DVAHLEELLAAADPDRPKLIAFESVYSMDG 192 (407)
T ss_pred HHHHHHHHHhCCCCCCEEEEeCcchHHHHHHHHHcCCcEEEECCC-----CHHHHHHHHHhccCCCCeEEEEeCCCCCCc
Confidence 999988876654578888888889999998999899988777764 8899999987432 3456888888999999
Q ss_pred cccCHHHHHHHHHHhCCCCCceEEEEecCcccc-cccccccCC-CCCCcccccEEEEcCCCCCCCCCCceeEEeehhhhh
Q 011842 249 AVDDLDLVIQTLEESGFTQDRFYIHCDGALFGL-MMPFVKKAP-KVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHIN 326 (476)
Q Consensus 249 ~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~-~~~~~~~~~-~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~ 326 (476)
.+.|+++|.++|++||+ ++++|+||+.+ +.+...... .....+..|+++.+++|.++.+ .|+++.++++++
T Consensus 193 ~~~~l~~i~~l~~~~~~-----~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~--GG~~~~~~~~~~ 265 (407)
T PRK09064 193 DIAPIAEICDLADKYNA-----LTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKAFGVM--GGYIAGSAALVD 265 (407)
T ss_pred cccCHHHHHHHHHHcCC-----EEEEECCCcccccCCCCCChHHhcCCCCCCeEEEEecchhhhcc--CceEecCHHHHH
Confidence 99999999999999999 99999999833 333222111 1122223688888999998742 388888877665
Q ss_pred hhcC-CccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecC
Q 011842 327 VLSS-NVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERP 405 (476)
Q Consensus 327 ~l~~-~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~ 405 (476)
.+.. ...|.+ ..+.+........++++.+... ....++..+++++|.+.|++.|+.. .++.++++.+..+
T Consensus 266 ~l~~~~~~~~~------t~~~~~~~~~aa~~al~~~~~~--~~~~~~~~~~~~~l~~~L~~~g~~~-~~~~~~iv~i~~~ 336 (407)
T PRK09064 266 AVRSYAPGFIF------TTSLPPAIAAAALASIRHLKES--NEERERHQERAAKLKAALDAAGIPV-MPNESHIVPVMVG 336 (407)
T ss_pred HHHHhCccccc------cCcCCHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHcCCCC-CCCCCCEEEEEeC
Confidence 5422 112221 1122212223334455544322 3446788899999999999988653 3455677776654
Q ss_pred Cc---HHH----h-h-ceeec--------ccCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 011842 406 QD---EEF----V-R-RWQLA--------CQGNIAHVVVMPNVTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 406 ~~---~~~----~-~-~~~l~--------~~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~ 450 (476)
.. .++ . + ++.+. ....++|++++..+|++||++++++|+++.+++
T Consensus 337 ~~~~~~~l~~~L~~~~gi~v~~~~~p~~~~~~~~lRis~~~~~t~edi~~l~~~l~~~~~~~ 398 (407)
T PRK09064 337 DPEKCKKASDMLLEEHGIYVQPINYPTVPRGTERLRITPTPFHTDEMIDHLVEALVEVWARL 398 (407)
T ss_pred CHHHHHHHHHHHHHhCCEEEeeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Confidence 31 122 2 2 33332 123679999999999999999999999987653
No 63
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.92 E-value=2.9e-23 Score=212.21 Aligned_cols=289 Identities=14% Similarity=0.055 Sum_probs=208.6
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcC-CchhHHHHHHHHHHhhCC-CcEEEecCCCchHHH-H-HHHHcCC-eEEE
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITN-CGTEGNLHGILVGREVFP-DGILYASRESHYSVF-K-AARMYRM-ECVK 210 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~-ggt~An~~al~aa~~~~p-~~~Vl~s~~~H~S~~-~-~~~~~G~-~v~~ 210 (476)
...++.+++++.+++++|.+. ++..++++ +||.++..++..... + +..|++ .-.|.+-. . +++.+|+ +++.
T Consensus 45 ~f~~~~~~~r~~l~~l~~~~~-~~~v~~~~gs~T~~~~~~~~~l~~--~~~~~vi~-~g~f~~~~~~~~~~~~g~~~v~~ 120 (378)
T PRK03080 45 PVKALLKRVIEGTRELLSLPE-GYEVGIVPGSDTGAWEMALWSLLG--ARRVDHLA-WESFGSKWATDVVKQLKLEDPRV 120 (378)
T ss_pred HHHHHHHHHHHHHHHHhCCCC-CceEEEECCchHHHHHHHHHhcCC--CCcceEEE-eCHHHHHHHHHHHhhcCCCCceE
Confidence 456888899999999999963 34577775 888888877766532 3 445554 45776633 3 3467899 9999
Q ss_pred EeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCC
Q 011842 211 VDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAP 290 (476)
Q Consensus 211 v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~ 290 (476)
++.+.++.+|+++++ . ++ .|.+++.+|.+|.+.|+++|++ ++||+ +++||++++.+..|
T Consensus 121 ~~~~~g~~~d~~~i~----~-~~---~V~~~h~~t~tG~~~pi~~I~~--~~~g~-----~~vVDa~qs~G~~p------ 179 (378)
T PRK03080 121 LEADYGSLPDLSAVD----F-DR---DVVFTWNGTTTGVRVPVARWIG--ADREG-----LTICDATSAAFALP------ 179 (378)
T ss_pred eccCCCCCCCHhhcC----C-CC---CEEEEecCCccceeccchhhcc--ccCCC-----eEEEecccccccCC------
Confidence 998777778877643 2 33 5888999999999999999999 88999 99999999988887
Q ss_pred CCCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCC------ccccCCCC------Cccc----CCCCChhHHHH
Q 011842 291 KVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSN------VEYLASRD------ATIM----GSRNGHAPIFL 354 (476)
Q Consensus 291 ~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~------~~yl~~~~------~~~~----~sr~~~~~l~~ 354 (476)
+++.+ +|++.+++|||+++|.|+|+++++++.++.+... +.|+.-.. ..+. ++.+......+
T Consensus 180 -idv~~-iD~~~~s~~K~l~~P~G~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l 257 (378)
T PRK03080 180 -LDWSK-LDVYTFSWQKVLGGEGGHGMAILSPRAVERLESYTPARPIPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDY 257 (378)
T ss_pred -CCHHH-CcEEEEehhhhCCCCCceEEEEECHHHHHhhhcccCCCCCchhheeccchHHhhhhhcCCcccCchHHHHHHH
Confidence 66654 7999999999999999999999999876554221 11221000 0111 22222233445
Q ss_pred HHHHHHhChh-cHHHHHHHHHHHHHHHHHHHHhcCCeEeec--C--Ce-eEEEEecCC-----cHHHh-----hceeecc
Q 011842 355 WYTLNRKGYK-GFQKEVQKCLRNAHYLKDRLLDAGISAMLN--E--LS-STVVFERPQ-----DEEFV-----RRWQLAC 418 (476)
Q Consensus 355 ~~~l~~~g~~-g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~--~--~~-~iv~f~~~~-----~~~~~-----~~~~l~~ 418 (476)
..+++.+... |++++.++..++++++++.|++.+...+.. + .+ .+++|..++ +..+. ++..+..
T Consensus 258 ~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~i~~~~~~~~~~~~~~~~~~~l~~~~i~v~~ 337 (378)
T PRK03080 258 LDQLDWANSIGGLDALIARTAANASVLYDWAEKTPWATPLVADPATRSNTSVTLDFVDAQAAVDAAAVAKLLRENGAVDI 337 (378)
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccCccEEEEEcCCchHHHHHHHHHHHHHcCCeecc
Confidence 6688888776 899999999999999999999988543331 2 13 477887765 11221 1222211
Q ss_pred -----cCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 011842 419 -----QGNIAHVVVMPNVTIDKLDDFLNELIENRSTWY 451 (476)
Q Consensus 419 -----~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~ 451 (476)
..+.+|++++.++|.+|||+|+++|+++.+.+.
T Consensus 338 g~~~~~~~~vRis~~~~~t~~di~~l~~al~~~~~~~~ 375 (378)
T PRK03080 338 EPYRDAPNGLRIWCGPTVEPADVEALTPWLDWAFERLK 375 (378)
T ss_pred ccccCCCCcEEEecCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 246899999999999999999999999877543
No 64
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.92 E-value=1.1e-22 Score=208.27 Aligned_cols=289 Identities=15% Similarity=0.080 Sum_probs=204.7
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCC
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLI 215 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~ 215 (476)
+..++++++.+++.+++|...++.++++|+|+++++..++.+... |++.|++++++|..+...++.+|++++.+|.+.
T Consensus 62 G~~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~--~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~ 139 (382)
T PRK06108 62 GIPELREALARYVSRLHGVATPPERIAVTSSGVQALMLAAQALVG--PGDEVVAVTPLWPNLVAAPKILGARVVCVPLDF 139 (382)
T ss_pred CCHHHHHHHHHHHHHHhCCCcCcceEEEeCChHHHHHHHHHHhcC--CCCEEEEeCCCccchHHHHHHCCCEEEEeeCCC
Confidence 456999999999999989543345699999999999888887765 899999999999999999999999999999863
Q ss_pred ---CCccCHHHHHHHHHcCCCCcEEEEEeeCCCcccccc---CHHHHHHHHHHhCCCCCceEEEEecCccccccc-cccc
Q 011842 216 ---SGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVD---DLDLVIQTLEESGFTQDRFYIHCDGALFGLMMP-FVKK 288 (476)
Q Consensus 216 ---~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id---~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~-~~~~ 288 (476)
++.+|+++|++.+.++++ ++++++++|+||.+- ++++|+++|+++|+ |+++|++|+.+.+. ....
T Consensus 140 ~~~~~~~d~~~l~~~~~~~~~---~i~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~-----~li~De~y~~~~~~~~~~~ 211 (382)
T PRK06108 140 GGGGWTLDLDRLLAAITPRTR---ALFINSPNNPTGWTASRDDLRAILAHCRRHGL-----WIVADEVYERLYYAPGGRA 211 (382)
T ss_pred CCCCccCCHHHHHHhcCccce---EEEEECCCCCCCcccCHHHHHHHHHHHHHCCc-----EEEEehhhhhhccCCCCCC
Confidence 346999999998865443 777888999999775 57889999999999 99999999877653 1111
Q ss_pred CCCCCCcc--cccEEEEcCCCCCC-CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHh--Ch
Q 011842 289 APKVSFKK--PIGSVSVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRK--GY 363 (476)
Q Consensus 289 ~~~~~~~~--~~Dsi~~s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~--g~ 363 (476)
.+..+... .-.++..+++|.++ .++++|++++++++++.+.....|.. .+ ...+.+.++...+ +.
T Consensus 212 ~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~~~~~~~~~~~~~~~~-------~~---~~~~~q~a~~~~l~~~~ 281 (382)
T PRK06108 212 PSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWLVAPPALGQVLEKLIEYNT-------SC---VAQFVQRAAVAALDEGE 281 (382)
T ss_pred CCHhhcCCCcCCEEEEeechhhccCcccceeeeeCCHHHHHHHHHHHHhcc-------cC---CChHHHHHHHHHHhCCh
Confidence 11122221 13467788999764 68899999998887665532222211 11 1123333333333 23
Q ss_pred hcHHHHHHHHHHHHHHHHHHHHhc-CCeEeecCC-eeEEEEecCC---cHHH----hh--ceeecc-------cCCEEEE
Q 011842 364 KGFQKEVQKCLRNAHYLKDRLLDA-GISAMLNEL-SSTVVFERPQ---DEEF----VR--RWQLAC-------QGNIAHV 425 (476)
Q Consensus 364 ~g~~~~~~~~~~~a~~l~~~L~~~-g~~~~~~~~-~~iv~f~~~~---~~~~----~~--~~~l~~-------~~~~lRv 425 (476)
+.+++..++..++++++.+.|++. ++. +.++. ..++.+..+. ..++ .+ +..+.. ..+++|+
T Consensus 282 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~p~~g~~~~~~l~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ri 360 (382)
T PRK06108 282 DFVAELVARLRRSRDHLVDALRALPGVE-VAKPDGAMYAFFRIPGVTDSLALAKRLVDEAGLGLAPGTAFGPGGEGFLRW 360 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCc-ccCCCeeEEEEEeCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEE
Confidence 345777888888999999999886 443 33444 4444555542 2222 22 233311 2468999
Q ss_pred EEcCCCCHHHHHHHHHHHHHHH
Q 011842 426 VVMPNVTIDKLDDFLNELIENR 447 (476)
Q Consensus 426 ~~~~~~T~edid~~~~~l~~~~ 447 (476)
++.. +.++++..++.|.+..
T Consensus 361 s~~~--~~~~l~~~l~~l~~~l 380 (382)
T PRK06108 361 CFAR--DPARLDEAVERLRRFL 380 (382)
T ss_pred EecC--CHHHHHHHHHHHHHHH
Confidence 9886 8999999999887754
No 65
>PLN02483 serine palmitoyltransferase
Probab=99.92 E-value=9.5e-23 Score=214.43 Aligned_cols=333 Identities=13% Similarity=0.060 Sum_probs=215.2
Q ss_pred HHHHhcccccccCCCCcCCcchHHHHHHH-HHhhCCCCCCcccCccchhhHHHHHHHHHHHHHHcCCCCCcccEEEcCCc
Q 011842 89 RKTLMERTKHHLGYPYNLDFDYGALAQLQ-HFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELENNEYWGYITNCG 167 (476)
Q Consensus 89 ~~~~~~~~~~~~g~p~~~~~~~~~l~~~l-~~~~n~~g~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~g~~t~gg 167 (476)
++.++.++++|+|...+.......+.+.+ .+..+..+....+ +.....+++++.+++++|.+. .+++++|
T Consensus 100 ~~~~n~~s~~YLgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~-----g~~~~~~ele~~lA~~~g~~~----ai~~~~G 170 (489)
T PLN02483 100 RRCLNLGSYNYLGFAAADEYCTPRVIESLKKYSASTCSSRVDG-----GTTKLHRELEELVARFVGKPA----AIVFGMG 170 (489)
T ss_pred ceEEEeecCCccCcCCCCHHHHHHHHHHHHHhCCCCCcccccc-----CCcHHHHHHHHHHHHHhCCCc----EEEECCH
Confidence 34667788889995543222222333333 3332222222222 334677778888999999653 5556667
Q ss_pred hhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccCHHHHHHHHHc-------CCCCc---EE
Q 011842 168 TEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCADFKAKLLQ-------NKDKP---AI 237 (476)
Q Consensus 168 t~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~~~Le~~l~~-------~~~~p---~~ 237 (476)
+.+|+.++.+... ||+.|++++++|.|+..+++..|++++.++++ |+++|++.|++ ++.+| .+
T Consensus 171 ~~an~~~i~al~~--~Gd~Vi~d~~~h~s~~~~~~~~Ga~v~~~~~~-----d~~~le~~l~~~i~~~~p~t~~p~~k~l 243 (489)
T PLN02483 171 YATNSTIIPALIG--KGGLIISDSLNHNSIVNGARGSGATIRVFQHN-----TPSHLEEVLREQIAEGQPRTHRPWKKII 243 (489)
T ss_pred HHHHHHHHHHhCC--CCCEEEEcchhhHHHHHHHHHcCCeEEEEeCC-----CHHHHHHHHHhhhhccccccccCCceEE
Confidence 8888877776655 99999999999999999999999999999976 67888777753 12112 34
Q ss_pred EEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccc-cccccC-CCCCCc-ccccEEEEcCCCCCCCCCC
Q 011842 238 INVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMM-PFVKKA-PKVSFK-KPIGSVSVSGHKFVGCPMP 314 (476)
Q Consensus 238 vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~-~~~~~~-~~~~~~-~~~Dsi~~s~hK~l~~p~~ 314 (476)
|+++...+++|.+.++++|+++|++||+ ++++|++|+.+.. +..+.. +.+... ..+|+++.+++|+++. .
T Consensus 244 ivve~v~s~~G~~~~l~~I~~la~~~~~-----~livDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~g~-~- 316 (489)
T PLN02483 244 VIVEGIYSMEGELCKLPEIVAVCKKYKA-----YVYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFGS-C- 316 (489)
T ss_pred EEECCCCCCCCcccCHHHHHHHHHHcCC-----EEEEECcCccCccCCCCCchHHhcCCCcccCcEEEEecchhccc-C-
Confidence 5454557999999999999999999999 9999999974332 111111 112222 2379999999999974 3
Q ss_pred ceeEEeehhhhhhhcCC-ccccCCCCCcccCCCCChhHHHHHHHHHHhC----hhcHHHHHHHHHHHHHHHHHHHHhcCC
Q 011842 315 CGVQITRMEHINVLSSN-VEYLASRDATIMGSRNGHAPIFLWYTLNRKG----YKGFQKEVQKCLRNAHYLKDRLLDAGI 389 (476)
Q Consensus 315 ~G~l~~~~~~~~~l~~~-~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g----~~g~~~~~~~~~~~a~~l~~~L~~~g~ 389 (476)
.|+++.++++++.+... ..+.. .++.+........++++.+- .+...++++++.+++++|++.|++.|+
T Consensus 317 GG~i~~~~~li~~l~~~~~~~~~------~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~~~G~ 390 (489)
T PLN02483 317 GGYIAGSKELIQYLKRTCPAHLY------ATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFFRSELQKMGF 390 (489)
T ss_pred ceEEEcCHHHHHHHHHhCccccc------cCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHHHCCC
Confidence 48888888777665422 11211 11111111112223444331 122355678899999999999999987
Q ss_pred eEeecCCeeEEEEecCC---cHHHh-----hceeec--------ccCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 011842 390 SAMLNELSSTVVFERPQ---DEEFV-----RRWQLA--------CQGNIAHVVVMPNVTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 390 ~~~~~~~~~iv~f~~~~---~~~~~-----~~~~l~--------~~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~ 450 (476)
....+..++++.+.... ...+. ++..+. .....+|++++..+|+||||+++++|+++.+.+
T Consensus 391 ~v~~~~~sp~~~l~l~~~~~~~~~~~~Ll~~GI~v~~~~fp~~p~~~~~vRi~isa~~t~edId~~l~~L~~~~~~~ 467 (489)
T PLN02483 391 EVLGDNDSPVMPIMLYNPAKIPAFSRECLKQNVAVVVVGFPATPLLLARARICISASHSREDLIKALEVISEVGDLV 467 (489)
T ss_pred cccCCCCCCEEEEEECCHHHHHHHHHHHHHCCcEEeeeCCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHh
Confidence 54434444555443322 11222 222221 122679999999999999999999999987665
No 66
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.92 E-value=1.9e-22 Score=208.34 Aligned_cols=331 Identities=15% Similarity=0.108 Sum_probs=215.5
Q ss_pred HHHHhcccccccCCCCcCCcchHHHHHHHHHhhCCCCCCcccCccchhhHHHHHHHHHHHHHHcCCCCCcccEEEcCCch
Q 011842 89 RKTLMERTKHHLGYPYNLDFDYGALAQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELENNEYWGYITNCGT 168 (476)
Q Consensus 89 ~~~~~~~~~~~~g~p~~~~~~~~~l~~~l~~~~n~~g~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt 168 (476)
++.+++.+++|||...+. .....+ ...+...|.....++...+.....+++.+.+++++|.+. .+++++|+
T Consensus 45 ~~~~~~~sn~ylgl~~~p----~v~~a~-~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~~~----~~~~~SG~ 115 (406)
T PRK13393 45 REVTVWCSNDYLGMGQHP----AVLAAM-HEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHGKEA----ALLFTSGY 115 (406)
T ss_pred ccEEEeecccccCCCCCH----HHHHHH-HHHHHHcCCCCcccccccCChHHHHHHHHHHHHHhCCCc----EEEeCCcH
Confidence 346778888899843332 222222 222222222111121111223567778888999998643 77788888
Q ss_pred hHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccCHHHHHHHHHcCC-CCcEEEEEeeCCCcc
Q 011842 169 EGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCADFKAKLLQNK-DKPAIINVNIGTTVK 247 (476)
Q Consensus 169 ~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~~~Le~~l~~~~-~~p~~vv~t~gtt~t 247 (476)
+||..++.+.....++++|+++...|.|+..+++..|.+++.++.+ |+++|++.+...+ .++.+|+++++++++
T Consensus 116 ~An~~ai~~l~~~~~g~~I~~~~~~H~s~~~~~~~~g~~~~~~~~~-----d~~~l~~~l~~~~~~~~~~v~~~~v~~~~ 190 (406)
T PRK13393 116 VSNWAALSTLGSRLPGCVILSDELNHASMIEGIRHSRAEKRIFRHN-----DPADLERKLSDLDPHRPKLVAFESVYSMD 190 (406)
T ss_pred HHHHHHHHHhhcCCCCCEEEEccchhHHHHHHHHHcCCeEEEeCCC-----CHHHHHHHHHhccCCCCEEEEEcCCCCCC
Confidence 9999998865443478899999999999999999999988888764 8889998886432 234578888899999
Q ss_pred ccccCHHHHHHHHHHhCCCCCceEEEEecCccccc-ccccccC-CCCCCcccccEEEEcCCCCCCCCCCceeEEeehhhh
Q 011842 248 GAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLM-MPFVKKA-PKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHI 325 (476)
Q Consensus 248 G~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~-~~~~~~~-~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~ 325 (476)
|.+.|+++|.++|++||+ ++++|++|+.++ .+..... .........|++..++.|.++.+ .|+++.++++.
T Consensus 191 G~~~~l~~i~~l~~~~~~-----~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~tlsKa~g~~--GG~~~~~~~~~ 263 (406)
T PRK13393 191 GDIAPIAEICDVAEKHGA-----MTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEGTLAKAFGVM--GGYITGSAALC 263 (406)
T ss_pred CchhCHHHHHHHHHHcCC-----EEEEECCccccccCCCCCchhhhcCCCCCCeEEEEeCchhhccc--CceeeCCHHHH
Confidence 999999999999999999 999999998443 3332211 01122223688888899999853 27777777765
Q ss_pred hhhcCC-ccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEec
Q 011842 326 NVLSSN-VEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFER 404 (476)
Q Consensus 326 ~~l~~~-~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~ 404 (476)
+.+... ..|. +.++.+........++++.+...+ ...++..+++++|.+.|++.|+..+ ++.++++.+..
T Consensus 264 ~~l~~~~~~~~------~t~~~~p~~~aa~~aaL~~~~~~~--~~~~~~~~~~~~l~~~L~~~g~~~~-~~~~~i~~v~~ 334 (406)
T PRK13393 264 DFIRSFASGFI------FTTSLPPAVAAGALASVRHLKASS--AERERHQDRVARLRARLDKAGIPHL-PNPSHIVPVMV 334 (406)
T ss_pred HHHHHhCcCce------ecCccCHHHHHHHHHHHHHHhhCH--HHHHHHHHHHHHHHHHHHHcCCCcC-CCCCCeEEEEe
Confidence 544321 1121 122222122333445555442222 2345667889999999998876433 44556666554
Q ss_pred CCc---HHH----hh--ceeec--------ccCCEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Q 011842 405 PQD---EEF----VR--RWQLA--------CQGNIAHVVVMPNVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 405 ~~~---~~~----~~--~~~l~--------~~~~~lRv~~~~~~T~edid~~~~~l~~~~~~ 449 (476)
++. ..+ .+ ++.+. .....+|++++..+|++|||+++++|+++.+.
T Consensus 335 ~~~~~~~~l~~~L~~~~Gi~v~~~~~p~~p~g~~~iRis~~~~~t~edid~l~~~l~~~~~~ 396 (406)
T PRK13393 335 GDPVLCKQISDELLDRYGIYVQPINYPTVPRGTERLRITPSPLHTDADIEHLVQALSEIWAR 396 (406)
T ss_pred CCHHHHHHHHHHHHHhCCEEEEeECCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHh
Confidence 431 122 22 44432 12368999999999999999999999988754
No 67
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.92 E-value=2.3e-22 Score=202.39 Aligned_cols=289 Identities=15% Similarity=0.080 Sum_probs=206.9
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCC
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLI 215 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~ 215 (476)
+..++++.+.+++...+|.+......++++|+|+++..++.++.. +++.|+++.+.|.++..+++..|++++.++.++
T Consensus 37 ~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~--~g~~vl~~~~~~~~~~~~~~~~~~~~~~i~~~~ 114 (350)
T cd00609 37 GLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALLN--PGDEVLVPDPTYPGYEAAARLAGAEVVPVPLDE 114 (350)
T ss_pred CcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhCC--CCCEEEEcCCCchhHHHHHHHCCCEEEEEeccc
Confidence 567999999999999887543344589999999999988887765 789999999999999999999999999999987
Q ss_pred CCccCH--HHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHH---HHHHHHhCCCCCceEEEEecCcccccccccccCC
Q 011842 216 SGEIDC--ADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLV---IQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAP 290 (476)
Q Consensus 216 ~g~~D~--~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I---~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~ 290 (476)
++.++. +.+++.+.+ .+.+|+++++++++|.+.|++++ .++|+++|+ ++++|++|+++.........
T Consensus 115 ~~~~~~~~~~~~~~~~~---~~~~v~i~~~~~~tG~~~~~~~l~~l~~~~~~~~~-----~~ivD~a~~~~~~~~~~~~~ 186 (350)
T cd00609 115 EGGFLLDLELLEAAKTP---KTKLLYLNNPNNPTGAVLSEEELEELAELAKKHGI-----LIISDEAYAELVYDGEPPPA 186 (350)
T ss_pred ccCCccCHHHHHhhcCc---cceEEEEECCCCCCCcccCHHHHHHHHHHHHhCCe-----EEEEecchhhceeCCccccc
Confidence 777765 555555433 34588888899999999886555 589999999 99999999876543221110
Q ss_pred CCCCcc-cccEEEEcCCCCCC-CCCCceeEEeeh-hhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHH
Q 011842 291 KVSFKK-PIGSVSVSGHKFVG-CPMPCGVQITRM-EHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQ 367 (476)
Q Consensus 291 ~~~~~~-~~Dsi~~s~hK~l~-~p~~~G~l~~~~-~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~ 367 (476)
...... ..|++..++||+++ .+.++|++++++ ++.+.+.....+. ..+.+......++.+++... ++++
T Consensus 187 ~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~l~~~~-~~~~ 258 (350)
T cd00609 187 LALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEELLERLKKLLPYT-------TSGPSTLSQAAAAAALDDGE-EHLE 258 (350)
T ss_pred ccCcCccCcEEEEeecccccCCcccceEEEecCHHHHHHHHHHHHHhc-------ccCCChHHHHHHHHHHhCcH-HHHH
Confidence 111222 37888999999998 678899999998 5665553322221 12222233333444444332 5778
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCeEe-ecCCeeEEEEecCCc--HH-H---hh--ceeec-c------cCCEEEEEEcCCC
Q 011842 368 KEVQKCLRNAHYLKDRLLDAGISAM-LNELSSTVVFERPQD--EE-F---VR--RWQLA-C------QGNIAHVVVMPNV 431 (476)
Q Consensus 368 ~~~~~~~~~a~~l~~~L~~~g~~~~-~~~~~~iv~f~~~~~--~~-~---~~--~~~l~-~------~~~~lRv~~~~~~ 431 (476)
+..++..++++++.+.|++.+...+ .+...+++++..+.. .. + .. ++.+. . ....+|++++..
T Consensus 259 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~gi~i~~~~~~~~~~~~~iRi~~~~~- 337 (350)
T cd00609 259 ELRERYRRRRDALLEALKELGPLVVVKPSGGFFLWLDLPEGDDEEFLERLLLEAGVVVRPGSAFGEGGEGFVRLSFATP- 337 (350)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCccccCCCccEEEEEecCCCChHHHHHHHHHhCCEEEecccccccCCCCeEEEEeeCC-
Confidence 8889999999999999999876543 333445666665542 21 1 12 22222 1 456899999877
Q ss_pred CHHHHHHHHHHHH
Q 011842 432 TIDKLDDFLNELI 444 (476)
Q Consensus 432 T~edid~~~~~l~ 444 (476)
++||++++++|+
T Consensus 338 -~~~i~~~~~al~ 349 (350)
T cd00609 338 -EEELEEALERLA 349 (350)
T ss_pred -HHHHHHHHHHhh
Confidence 999999999986
No 68
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.92 E-value=1.9e-23 Score=210.20 Aligned_cols=284 Identities=15% Similarity=0.158 Sum_probs=197.6
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHH---HHHHcCCeEEEEeCCC
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFK---AARMYRMECVKVDCLI 215 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~---~~~~~G~~v~~v~~~~ 215 (476)
...+++++++++++| +. +.++|+|||+++..++.+... |++.|+++.++|+++.. .+++.|++++.++.+.
T Consensus 32 ~~~~~l~~~~a~~~g-~~---~~~~~~~gt~a~~~~~~~l~~--~gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 105 (338)
T cd06502 32 PTTAKLEARAAELFG-KE---AALFVPSGTAANQLALAAHTQ--PGGSVICHETAHIYTDEAGAPEFLSGVKLLPVPGEN 105 (338)
T ss_pred HHHHHHHHHHHHHhC-CC---eEEEecCchHHHHHHHHHhcC--CCCeEEEecCcceeeecCCcHHHHcCceEEeecCCC
Confidence 456677788999999 32 489999999999988887764 89999999999988654 3566899999999864
Q ss_pred CCccCHHHHHHHHHcCC----CCcEEEEEeeCCCccc--cccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccC
Q 011842 216 SGEIDCADFKAKLLQNK----DKPAIINVNIGTTVKG--AVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKA 289 (476)
Q Consensus 216 ~g~~D~~~Le~~l~~~~----~~p~~vv~t~gtt~tG--~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~ 289 (476)
+.+|+++|++++.+.. .++.+|++++++++.| ..+++++|+++|++||+ ++|+|+||..+.......
T Consensus 106 -~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~g~~~~~~~l~~i~~~~~~~~~-----~livDea~~~~~~~~~~~- 178 (338)
T cd06502 106 -GKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEGGTVYPLDELKAISALAKENGL-----PLHLDGARLANAAAALGV- 178 (338)
T ss_pred -CcCCHHHHHHHhhccCCCcCCcceEEEEEeecCCccccCHHHHHHHHHHHHHcCC-----eEeechHHHHHHHHhcCC-
Confidence 7899999999997531 2345788888887633 34678899999999999 999999985322110000
Q ss_pred CCCCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHH
Q 011842 290 PKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKE 369 (476)
Q Consensus 290 ~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~ 369 (476)
+.......+|+++.++|||++.|. .++++.++++++.+....... .++.+ ...+.+++++..+...++.++
T Consensus 179 ~~~~~~~~~d~~~~s~sK~~~~~~-g~~~~~~~~~~~~~~~~~~~~-------~~~~~-~~~~~~~a~~~~L~~~~~~~~ 249 (338)
T cd06502 179 ALKTYKSGVDSVSFCLSKGGGAPV-GAVVVGNRDFIARARRRRKQA-------GGGMR-QSGFLAAAGLAALENDLWLRR 249 (338)
T ss_pred CHHHHHhcCCEEEEeccccCCCcc-ceEEECCHHHHHHHHHHHHHh-------CCChh-hHHHHHHHHHHHhcCchHHHH
Confidence 101111247899999999999764 334556666665543211110 01111 223445555565554567778
Q ss_pred HHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecCCcH----HHh--------hceeec-ccCCEEEEEEcCCCCHHHH
Q 011842 370 VQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERPQDE----EFV--------RRWQLA-CQGNIAHVVVMPNVTIDKL 436 (476)
Q Consensus 370 ~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~~~----~~~--------~~~~l~-~~~~~lRv~~~~~~T~edi 436 (476)
+++..++++++.+.|++.|+. ..++.++++.+..+... .+. +++.+. ...+.+|++++..+|++|+
T Consensus 250 ~~~~~~~~~~l~~~L~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~l~~~~~~gi~~~~~~~~~lRi~~~~~~~~~~i 328 (338)
T cd06502 250 LRHDHEMARRLAEALEELGGL-ESEVQTNIVLLDPVEANAVFVELSKEAIERRGEGVLFYAWGEGGVRFVTHWDTTEEDV 328 (338)
T ss_pred HHHHHHHHHHHHHHHHhcCCC-cccccCCeEEEecCCccHHHHHHHHHHHHhhhCCEEEEecCCCeEEEEeecCCCHHHH
Confidence 889999999999999998873 44556788777764321 222 233332 2347899999999999999
Q ss_pred HHHHHHHHH
Q 011842 437 DDFLNELIE 445 (476)
Q Consensus 437 d~~~~~l~~ 445 (476)
++++++|++
T Consensus 329 ~~~~~~l~~ 337 (338)
T cd06502 329 DELLSALKA 337 (338)
T ss_pred HHHHHHHhc
Confidence 999999864
No 69
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.92 E-value=2.1e-22 Score=208.37 Aligned_cols=287 Identities=14% Similarity=0.096 Sum_probs=195.1
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCc
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGE 218 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~ 218 (476)
....++.+.+++++|.+. .+++++|++||..++.......++++|+++...|.++..+++..|++++.++.+
T Consensus 91 ~~~~~Le~~la~~~g~~~----~i~~~sG~~a~~~~i~~l~~~~~g~~vi~~~~~h~s~~~~~~~~g~~~~~~~~~---- 162 (410)
T PRK13392 91 HPHVLLERELADLHGKES----ALLFTSGYVSNDAALSTLGKLLPGCVILSDALNHASMIEGIRRSGAEKQVFRHN---- 162 (410)
T ss_pred HHHHHHHHHHHHHhCCCC----EEEECcHHHHHHHHHHHHhcCCCCCEEEEehhhhHHHHHHHHHcCCeEEEEeCC----
Confidence 345577777888999642 566777789998888765433478899999889999988999999998887654
Q ss_pred cCHHHHHHHHHcC-CCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccc-cccccCC-CCCCc
Q 011842 219 IDCADFKAKLLQN-KDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMM-PFVKKAP-KVSFK 295 (476)
Q Consensus 219 ~D~~~Le~~l~~~-~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~-~~~~~~~-~~~~~ 295 (476)
|.+++++.+.+. +.++.+|+++++++++|.+.|+++|.++|++||+ ++++|++|+.+.+ +...... .....
T Consensus 163 -d~~~l~~~l~~~~~~~t~~v~i~~~~n~tG~~~~l~~i~~l~~~~~~-----~livDea~~~g~~g~~g~g~~~~~~~~ 236 (410)
T PRK13392 163 -DLADLEEQLASVDPDRPKLIAFESVYSMDGDIAPIEAICDLADRYNA-----LTYVDEVHAVGLYGARGGGIAERDGLM 236 (410)
T ss_pred -CHHHHHHHHHhccCCCCEEEEEeCCCCCCcccccHHHHHHHHHHcCC-----EEEEECCccccCcCCCCCchhhhccCC
Confidence 677788877643 2345588899999999999999999999999999 9999999984433 2211110 11222
Q ss_pred ccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcC-CccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHH
Q 011842 296 KPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSS-NVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCL 374 (476)
Q Consensus 296 ~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~-~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~ 374 (476)
+.+|+++.+++|+++.+. |+++.+++.++.+.. ...|.. ..+.+.....++.++++.+. ......+++.
T Consensus 237 ~~~div~~tlsK~~g~~G--G~~~~~~~~~~~l~~~~~~~~~------s~~~~~~~~~a~~aaL~~~~--~~~~~~~~~~ 306 (410)
T PRK13392 237 DRIDMIQGTLAKAFGCLG--GYIAASADLIDFVRSFAPGFIF------TTALPPAVAAGATAAIRHLK--TSQTERDAHQ 306 (410)
T ss_pred CCCcEEEEEChHhhhccc--chhhcCHHHHHHHHHhCcchhc------cCcCCHHHHHHHHHHHHHHh--cCHHHHHHHH
Confidence 347888889999988642 777777776654432 112221 11111112233334454432 2234557788
Q ss_pred HHHHHHHHHHHhcCCeEeecCCeeEEEEecCCc---HHHh------hceeec--------ccCCEEEEEEcCCCCHHHHH
Q 011842 375 RNAHYLKDRLLDAGISAMLNELSSTVVFERPQD---EEFV------RRWQLA--------CQGNIAHVVVMPNVTIDKLD 437 (476)
Q Consensus 375 ~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~~---~~~~------~~~~l~--------~~~~~lRv~~~~~~T~edid 437 (476)
++++++.+.|++.|+.. .++.++++.+..+.. .++. +++.+. ....++|++++..+|++|+|
T Consensus 307 ~~~~~l~~~L~~~g~~~-~~~~~~~~~i~~~~~~~~~~~~~~L~~~~GI~v~~~~~p~~~~~~~~lRis~~~~~t~edid 385 (410)
T PRK13392 307 DRVAALKAKLNANGIPV-MPSPSHIVPVMVGDPTLCKAISDRLMSEHGIYIQPINYPTVPRGTERLRITPTPLHDDEDID 385 (410)
T ss_pred HHHHHHHHHHHHcCCCC-CCCCCCEEEEEeCCHHHHHHHHHHHHHhCCEEEeeeCCCCCCCCCceEEEEECCCCCHHHHH
Confidence 89999999999988653 345566665544431 1222 233332 12368999999999999999
Q ss_pred HHHHHHHHHHHHH
Q 011842 438 DFLNELIENRSTW 450 (476)
Q Consensus 438 ~~~~~l~~~~~~~ 450 (476)
+++++|+++.+++
T Consensus 386 ~l~~aL~~~~~~~ 398 (410)
T PRK13392 386 ALVAALVAIWDRL 398 (410)
T ss_pred HHHHHHHHHHHHc
Confidence 9999999887653
No 70
>PLN00175 aminotransferase family protein; Provisional
Probab=99.91 E-value=5.4e-22 Score=205.23 Aligned_cols=291 Identities=13% Similarity=0.040 Sum_probs=208.8
Q ss_pred hhhHHHHHHHHHHHHHHcCCCCCcc-cEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeC
Q 011842 135 VHSRQFEVGVLDWFARLWELENNEY-WGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDC 213 (476)
Q Consensus 135 ~~~~~le~~~~~~la~l~g~~~~~~-~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~ 213 (476)
.+..++++++.+++.+..|++.++. .+++|+|+++|+..++.+..+ ||+.|++.++.|..+...++..|++++.+++
T Consensus 91 ~G~~~Lr~aia~~~~~~~g~~~~~~~~I~vt~G~~~al~~~~~~l~~--~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~ 168 (413)
T PLN00175 91 FGVPELNSAIAERFKKDTGLVVDPEKEVTVTSGCTEAIAATILGLIN--PGDEVILFAPFYDSYEATLSMAGAKIKTVTL 168 (413)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCHHHHHHHHHHHhCC--CCCEEEEeCCCchhHHHHHHHcCCEEEEEEC
Confidence 3577999999999999888764333 588999999999888877665 9999999999999999999999999999999
Q ss_pred CC-CCccCHHHHHHHHHcCCCCcEEEEEeeCCCcccccc---CHHHHHHHHHHhCCCCCceEEEEecCcccccccccccC
Q 011842 214 LI-SGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVD---DLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKA 289 (476)
Q Consensus 214 ~~-~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id---~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~ 289 (476)
++ ++.+|++.|++.+.++++ +|+++++.|+||.+- .+++|+++|++|++ |+++|++|..+.+.. .+.
T Consensus 169 ~~~~~~~~~~~l~~~~~~~~k---~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~-----~ii~De~Y~~l~~~~-~~~ 239 (413)
T PLN00175 169 RPPDFAVPEDELKAAFTSKTR---AILINTPHNPTGKMFTREELELIASLCKENDV-----LAFTDEVYDKLAFEG-DHI 239 (413)
T ss_pred CcccCCCCHHHHHHhcCcCce---EEEecCCCCCCCcCCCHHHHHHHHHHHHHcCc-----EEEEecccCccccCC-ccc
Confidence 74 578999999999976554 777889999999985 57889999999999 999999998765532 222
Q ss_pred CCCCCcc--cccEEEEcCCCCCC-CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhC--hh
Q 011842 290 PKVSFKK--PIGSVSVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKG--YK 364 (476)
Q Consensus 290 ~~~~~~~--~~Dsi~~s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g--~~ 364 (476)
+...+.. .-.++..|+.|.++ +++++|++++++++++.+.....+.. +. ...+.++++...+. ..
T Consensus 240 s~~~~~~~~~~vi~i~SfSK~~~~~G~RiG~~v~~~~l~~~l~~~~~~~~-----~~-----~s~~~Q~a~~~~l~~~~~ 309 (413)
T PLN00175 240 SMASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLT-----FA-----TATPMQWAAVAALRAPES 309 (413)
T ss_pred ChhhCCCCcCcEEEEecchhhccCcchheeeeEeCHHHHHHHHHHHhhcc-----CC-----CCHHHHHHHHHHHhCCHH
Confidence 2122211 12456678889886 88999999999887665533222211 11 11344555555442 23
Q ss_pred cHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecC-----CcHHHhh------ceee-cc---------cCCEE
Q 011842 365 GFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERP-----QDEEFVR------RWQL-AC---------QGNIA 423 (476)
Q Consensus 365 g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~-----~~~~~~~------~~~l-~~---------~~~~l 423 (476)
.+++..+++.++++++.+.|++.|+....++....++++.+ .+.++.+ +..+ +. ..+.+
T Consensus 310 ~~~~~~~~~~~~~~~l~~~L~~~g~~~~~p~g~~f~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~i 389 (413)
T PLN00175 310 YYEELKRDYSAKKDILVEGLKEVGFKVYPSSGTYFVMVDHTPFGFENDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLV 389 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCeecCCCeeEEEEEeccccCCCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEE
Confidence 46777888888999999999998865433333444555432 1223322 2222 11 13589
Q ss_pred EEEEcCCCCHHHHHHHHHHHHHHHH
Q 011842 424 HVVVMPNVTIDKLDDFLNELIENRS 448 (476)
Q Consensus 424 Rv~~~~~~T~edid~~~~~l~~~~~ 448 (476)
|+++. .++++++..++.|.+..+
T Consensus 390 Rls~~--~~~e~l~~~~~rL~~~~~ 412 (413)
T PLN00175 390 RFAFC--KDEETLRAAVERMKTKLK 412 (413)
T ss_pred EEEEc--CCHHHHHHHHHHHHHHHh
Confidence 99987 379999999998887654
No 71
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.91 E-value=3.4e-22 Score=205.48 Aligned_cols=291 Identities=11% Similarity=0.103 Sum_probs=206.5
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCC
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLI 215 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~ 215 (476)
+..++++++++++.+.+|...+...+++|+|+++|+..++.+... |++.|++++++|.++...++..|++++.+|+++
T Consensus 71 g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~--~g~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~ 148 (391)
T PRK08361 71 GIPELREAIAEYYKKFYGVDVDVDNVIVTAGAYEATYLAFESLLE--EGDEVIIPDPAFVCYVEDAKIAEAKPIRIPLRE 148 (391)
T ss_pred CcHHHHHHHHHHHHHHhCCCCCcccEEEeCChHHHHHHHHHHhcC--CCCEEEEcCCCCcccHHHHHHcCCEEEEEecCC
Confidence 567999999999988887654445699999999999988887755 899999999999999999999999999999975
Q ss_pred C--CccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCcccccccccccCC
Q 011842 216 S--GEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAP 290 (476)
Q Consensus 216 ~--g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~ 290 (476)
+ +.+|+++|++.+.++++ +|++++++|+||.+.| +++|+++|+++++ ++++|++|+.+.++.....+
T Consensus 149 ~~~~~~d~~~l~~~i~~~~~---~v~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~-----~ii~De~y~~~~~~~~~~~~ 220 (391)
T PRK08361 149 ENEFQPDPDELLELITKRTR---MIVINYPNNPTGATLDKEVAKAIADIAEDYNI-----YILSDEPYEHFLYEGAKHYP 220 (391)
T ss_pred ccCCCCCHHHHHHhcccccE---EEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCe-----EEEEEcccccceeCCCCCCC
Confidence 3 57999999999976654 7778889999999988 8899999999999 99999999876543222222
Q ss_pred CCCCcccccEEEEcCCCCCC-CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhCh----hc
Q 011842 291 KVSFKKPIGSVSVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGY----KG 365 (476)
Q Consensus 291 ~~~~~~~~Dsi~~s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~----~g 365 (476)
........++++.|++|.++ .++++|++++++++++.+.....+.. ++- ..+.+.++...+.. +.
T Consensus 221 ~~~~~~~~~i~~~s~SK~~~~~GlRiG~~~~~~~~~~~~~~~~~~~~-------~~~---~~~~q~~~~~~l~~~~~~~~ 290 (391)
T PRK08361 221 MIKYAPDNTILANSFSKTFAMTGWRLGFVIAPEQVIKDMIKLHAYII-------GNV---ASFVQIAGIEALRSKESWKA 290 (391)
T ss_pred HhhcCCCCEEEEecCchhcCCcHhhhhhhccCHHHHHHHHHHHhhhc-------cCC---ChHHHHHHHHHhcCCcccHH
Confidence 22221224678899999886 67789999998877665432222211 111 12344444444422 23
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeE-EEEecCC----cHHHh----h--ceeecc-------cCCEEEEEE
Q 011842 366 FQKEVQKCLRNAHYLKDRLLDAGISAMLNELSST-VVFERPQ----DEEFV----R--RWQLAC-------QGNIAHVVV 427 (476)
Q Consensus 366 ~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~i-v~f~~~~----~~~~~----~--~~~l~~-------~~~~lRv~~ 427 (476)
+++..++..++++.+.+.|++.+...+.++..+. +.+..++ +.++. + ++.+.. ..+++|+++
T Consensus 291 ~~~~~~~~~~~~~~~~~~L~~~~~~~~~~p~g~~~~~~~l~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~ 370 (391)
T PRK08361 291 VEEMRKEYNERRKLVLKRLKEMPHIKVFEPKGAFYVFANIDETGMSSEDFAEWLLEKARVVVIPGTAFGKAGEGYIRISY 370 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCeecCCCEEEEEEEECCCCCCCHHHHHHHHHHhCCEEEcCchhhCCCCCCEEEEEe
Confidence 5677777788889999999887433444455444 3334442 22322 1 333321 236899998
Q ss_pred cCCCCHHHHHHHHHHHHHHHH
Q 011842 428 MPNVTIDKLDDFLNELIENRS 448 (476)
Q Consensus 428 ~~~~T~edid~~~~~l~~~~~ 448 (476)
.. ++++++..++.|++..+
T Consensus 371 ~~--~~~~l~~al~~l~~~l~ 389 (391)
T PRK08361 371 AT--SKEKLIEAMERMEKALE 389 (391)
T ss_pred cC--CHHHHHHHHHHHHHHHh
Confidence 73 67788888887777654
No 72
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.91 E-value=4.7e-23 Score=192.04 Aligned_cols=327 Identities=13% Similarity=0.088 Sum_probs=229.9
Q ss_pred HHHHHhcccccccCCCCcCCcchHHHHHHHHHhhCCCCCCcccCccchhhHHHHHHHHHHHHHHcCCCCCcccEEEcCCc
Q 011842 88 YRKTLMERTKHHLGYPYNLDFDYGALAQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELENNEYWGYITNCG 167 (476)
Q Consensus 88 ~~~~~~~~~~~~~g~p~~~~~~~~~l~~~l~~~~n~~g~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~g~~t~gg 167 (476)
.++.++++.++|+|...++...-.....+- ..|.+..+..+-.+...+++.+...++++.+-++ .++.+++
T Consensus 66 ~k~ilnFcaNnYLGLsshPeii~a~~~ale-----eyGaGlssvrfIcGtq~iHk~LE~kiAqfh~rED----~ilypsc 136 (417)
T KOG1359|consen 66 DKKILNFCANNYLGLSSHPEIINAGQKALE-----EYGAGLSSVRFICGTQDIHKLLESKIAQFHGRED----TILYPSC 136 (417)
T ss_pred ccceeeecccccccccCChHHHHHHHHHHH-----HhCCCccceeEEecchHHHHHHHHHHHHHhCCCc----eEEeccc
Confidence 455677888889995444432212222222 3333333444445667999999999999988764 7888999
Q ss_pred hhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeC-CCc
Q 011842 168 TEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCADFKAKLLQNKDKPAIINVNIG-TTV 246 (476)
Q Consensus 168 t~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~g-tt~ 246 (476)
-.||..++-+.+. |.+.|+.++..|.|+....++.. ..+.+|+-+|+..+.+..+...-+++|.+ .+|
T Consensus 137 fdANag~feail~--pedAvfSDeLNhASIIdGirLck---------ry~h~dv~~l~~~l~~a~k~r~klv~TDg~FSM 205 (417)
T KOG1359|consen 137 FDANAGAFEAILT--PEDAVFSDELNHASIIDGIRLCK---------RYRHVDVFDLEHCLISACKMRLKLVVTDGVFSM 205 (417)
T ss_pred cccchHHHHHhcC--hhhhhhccccccchhhhhhHHHh---------hhccchhHHHHHHHHHhhhheEEEEEecceecc
Confidence 9999888888776 99999999999999999888765 34667999999988766443345666655 999
Q ss_pred cccccCHHHHHHHHHHhCCCCCceEEEEecCcccc-cccccccCCCCCCcc-cccEEEEcCCCCCCCCCCceeEEeehhh
Q 011842 247 KGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGL-MMPFVKKAPKVSFKK-PIGSVSVSGHKFVGCPMPCGVQITRMEH 324 (476)
Q Consensus 247 tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~-~~~~~~~~~~~~~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~ 324 (476)
.|.+.|+++|.+++++||+ ++.+|++|+-+ ..+..+......... .+|.++.+..|.+++ ...|+...+.++
T Consensus 206 DGdiaPl~ei~~La~kYga-----LlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlGg-a~GGyttgp~~l 279 (417)
T KOG1359|consen 206 DGDIAPLEEISQLAKKYGA-----LLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALGG-ASGGYTTGPKPL 279 (417)
T ss_pred CCCcccHHHHHHHHHhcCc-----EEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhhhhcC-CCCCCccCChhH
Confidence 9999999999999999999 99999999844 444444443333333 499999999999983 456777777777
Q ss_pred hhhh-cCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEe
Q 011842 325 INVL-SSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFE 403 (476)
Q Consensus 325 ~~~l-~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~ 403 (476)
++-+ .+..+|+++......--. .+.+ ++..+ -.-...+.+...+.++|++.++..|+. +....++|+.+.
T Consensus 280 i~llrqr~RpylFSnslppavV~---~a~k---a~dll--m~s~~~i~~~~a~~qrfr~~me~aGft-Isg~~hPI~pv~ 350 (417)
T KOG1359|consen 280 ISLLRQRSRPYLFSNSLPPAVVG---MAAK---AYDLL--MVSSKEIQSRQANTQRFREFMEAAGFT-ISGASHPICPVM 350 (417)
T ss_pred HHHHHhcCCceeecCCCChhhhh---hhHH---HHHHH--HhhHHHHHHHHHHHHHHHHHHHhcCce-ecCCCCCcccee
Confidence 6655 445678876532111000 0111 12221 223566777788899999999989975 444446666665
Q ss_pred cCCcH--------HHhhceee--------cccCCEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Q 011842 404 RPQDE--------EFVRRWQL--------ACQGNIAHVVVMPNVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 404 ~~~~~--------~~~~~~~l--------~~~~~~lRv~~~~~~T~edid~~~~~l~~~~~~ 449 (476)
..+.. .+.+++.+ |...-++|+.++..+|+||||++++++.++.+.
T Consensus 351 lGda~lA~~~ad~lLk~Gi~Vigfs~PvVP~gkariRVqiSAaHt~edid~~i~Af~~vgr~ 412 (417)
T KOG1359|consen 351 LGDARLASKMADELLKRGIYVIGFSYPVVPKGKARIRVQISAAHTEEDIDRLIEAFSEVGRF 412 (417)
T ss_pred cccHHHHHHHHHHHHhcCceEEeecCCcCCCCceEEEEEEehhcCHHHHHHHHHHHHHHHHh
Confidence 54421 12334442 456678999999999999999999999998764
No 73
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.91 E-value=4.4e-22 Score=203.11 Aligned_cols=327 Identities=13% Similarity=0.041 Sum_probs=204.2
Q ss_pred HHhcccccccCCCCcCCcchHHHHHHHHHhhCC--CCCCcccCccchhhHHHHHHHHHHHHHHcCCCCCcccEEEcCCch
Q 011842 91 TLMERTKHHLGYPYNLDFDYGALAQLQHFSINN--LGDPFIESNYGVHSRQFEVGVLDWFARLWELENNEYWGYITNCGT 168 (476)
Q Consensus 91 ~~~~~~~~~~g~p~~~~~~~~~l~~~l~~~~n~--~g~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt 168 (476)
.+++.+++|+|+........+.+..+..+..+. .|.....+..-.+..++.+++++.+++++|.+. .++.++|+
T Consensus 6 ~~~~~s~~YL~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~~~----~l~~~sG~ 81 (370)
T PRK05937 6 SIDFVTNDFLGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGAPE----AFIVPSGY 81 (370)
T ss_pred eEEeECCCccCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCCCe----EEEECChH
Confidence 456778888887766544433333333332111 012222233223456888899999999999963 56667777
Q ss_pred hHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccCHHHHHHHHHcCC---CCcEEEEEeeCCC
Q 011842 169 EGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCADFKAKLLQNK---DKPAIINVNIGTT 245 (476)
Q Consensus 169 ~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~~~Le~~l~~~~---~~p~~vv~t~gtt 245 (476)
.+|+..+..... +++.|+++...|.|+..+++.+....+.++. .|+++|+++|++.. +...+|+++++++
T Consensus 82 ~a~~~~~~~~~~--~~d~ii~d~~~H~sv~~~~~~~~~~~~~~~~-----~d~~~l~~~l~~~~~~~~~~~~v~v~~v~s 154 (370)
T PRK05937 82 MANLGLCAHLSS--VTDYVLWDEQVHISVVYSLSVISGWHQSFRH-----NDLDHLESLLESCRQRSFGRIFIFVCSVYS 154 (370)
T ss_pred HHHHHHHHHhCC--CCCEEEEEhhhhHHHHHHHHHcCCceEEecC-----CCHHHHHHHHHhhhccCCCcEEEEEecCCC
Confidence 888643333222 6789999999999999998887544444543 48999999997531 2234667788999
Q ss_pred ccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccc-cccC-CCCCCcccccEEEEcCCCCCCCCCCceeEEeehh
Q 011842 246 VKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPF-VKKA-PKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRME 323 (476)
Q Consensus 246 ~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~-~~~~-~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~ 323 (476)
++|.+.|+++|.++|+++|+ ++|+|++|+.+.++. .... ..+.. ...+.+..+++|+++ |.|+|+++.+ +
T Consensus 155 ~~G~i~pl~eI~~l~~~~~~-----~livDea~~~G~~g~~g~g~~~~~~~-~~~~~~~~tlsK~~g-~~G~~vl~~~-~ 226 (370)
T PRK05937 155 FKGTLAPLEQIIALSKKYHA-----HLIVDEAHAMGIFGDDGKGFCHSLGY-ENFYAVLVTYSKALG-SMGAALLSSS-E 226 (370)
T ss_pred CCCCccCHHHHHHHHHHcCC-----EEEEECCccccccCCCCCchHHhhCC-CCCcEEEEechhhhh-cCceEEEcCH-H
Confidence 99999999999999999999 999999998654431 1110 00111 112355677889887 6777776653 3
Q ss_pred hhhhhc-CCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEE
Q 011842 324 HINVLS-SNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVF 402 (476)
Q Consensus 324 ~~~~l~-~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f 402 (476)
....+. ....|.+ .++-+.....++.++++.+...+ +...+++.+++++|.+.|...+. . .++.+
T Consensus 227 ~~~~~~~~~~~~~~------s~~~~~~~~~a~~aal~~l~~~~-~~~~~~l~~l~~~l~~~l~~~~~------~-~~~~i 292 (370)
T PRK05937 227 VKQDLMLNSPPLRY------STGLPPHLLISIQVAYDFLSQEG-ELARKQLFRLKEYFAQKFSSAAP------G-CVQPI 292 (370)
T ss_pred HHHHHHHhCCCCee------cCCCCHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHhcCCCCC------C-CEEEE
Confidence 322221 1122322 22222223344445666554444 45667888888999888764321 0 11223
Q ss_pred ecCC--cHHHh-----hceeec----ccCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 011842 403 ERPQ--DEEFV-----RRWQLA----CQGNIAHVVVMPNVTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 403 ~~~~--~~~~~-----~~~~l~----~~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~ 450 (476)
..+. ...+. +++.+. .....+|++++.++|+||||+|+++|+++.++.
T Consensus 293 ~~~~~~~~~~~~~L~~~gi~v~~~~~~~~~~iRis~~~~~t~edid~l~~~L~~~~~~~ 351 (370)
T PRK05937 293 FLPGISEQELYSKLVETGIRVGVVCFPTGPFLRVNLHAFNTEDEVDILVSVLATYLEKY 351 (370)
T ss_pred EeCChhHHHHHHHHHHCCeeEEeeCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHh
Confidence 3332 22222 233332 124689999999999999999999999987653
No 74
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.91 E-value=1.9e-21 Score=200.79 Aligned_cols=292 Identities=8% Similarity=-0.056 Sum_probs=206.9
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCc-ccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCC
Q 011842 136 HSRQFEVGVLDWFARLWELENNE-YWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCL 214 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~-~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~ 214 (476)
+..++++++++|+++.+|.+.++ .++++|+|+++++..++.+..+ ||+.|++..++|..+...++.+|++++.++++
T Consensus 79 G~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~al~~~~~~l~~--~Gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~ 156 (405)
T PRK06207 79 GDADIRELLAARLAAFTGAPVDAADELIITPGTQGALFLAVAATVA--RGDKVAIVQPDYFANRKLVEFFEGEMVPVQLD 156 (405)
T ss_pred CCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHHHHHHhcC--CCCEEEEeCCCchhHHHHHHHcCCEEEEEecc
Confidence 45689999999999999976443 5699999999999988888765 99999999999999999999999999999885
Q ss_pred -----CCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCccccccccc
Q 011842 215 -----ISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFV 286 (476)
Q Consensus 215 -----~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~ 286 (476)
.++.+|++.|++++.++++ +|++++++|+||.+-+ +++|+++|++||+ ||++|++|+.+.+...
T Consensus 157 ~~~~~~~~~~d~~~l~~~~~~~~k---~v~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~-----~iI~De~Y~~~~~~~~ 228 (405)
T PRK06207 157 YLSADKRAGLDLDQLEEAFKAGVR---VFLFSNPNNPAGVVYSAEEIAQIAALARRYGA-----TVIVDQLYSRLLYDGT 228 (405)
T ss_pred ccCcccCCCcCHHHHHHhhhhcCe---EEEECCCCCCCCcCCCHHHHHHHHHHHHHcCC-----EEEEeccccccccCCC
Confidence 2477999999999976654 7888899999999976 7889999999999 9999999987655322
Q ss_pred ccCCCCCC--cccccEEEEcCCCCCC-CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhC-
Q 011842 287 KKAPKVSF--KKPIGSVSVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKG- 362 (476)
Q Consensus 287 ~~~~~~~~--~~~~Dsi~~s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g- 362 (476)
...+.... ...--+++.|+.|.++ .++++|+++.++++++.+.....+... +.+ .+.+.++...+.
T Consensus 229 ~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlRiG~ii~~~~l~~~~~~~~~~~~~-------~~~---~~~q~a~~~~l~~ 298 (405)
T PRK06207 229 SYTHLRALPIDPENVITIMGPSKTESLSGYRLGVAFGSPAIIDRMEKLQAIVSL-------RAA---GYSQAVLRTWFSE 298 (405)
T ss_pred CCCchhcCCCCcCcEEEEecchhhccCcccceEEEEcCHHHHHHHHHHHhHhcc-------CCC---HHHHHHHHHHHhC
Confidence 22111111 1112256678889886 889999999988877665432222110 111 123333333332
Q ss_pred -hhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecC-CeeEEEEecCC----cHHHhh------ceeecc-------cCCEE
Q 011842 363 -YKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNE-LSSTVVFERPQ----DEEFVR------RWQLAC-------QGNIA 423 (476)
Q Consensus 363 -~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~-~~~iv~f~~~~----~~~~~~------~~~l~~-------~~~~l 423 (476)
..-+++.+++..++++++.+.|++.+...+.++ .++.+.++.+. ..++.+ +..+.. ..+++
T Consensus 299 ~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~gg~fl~~~l~~~~~~~~~~~~~l~~~~gV~v~pG~~F~~~~~~~~ 378 (405)
T PRK06207 299 PDGWMKDRIARHQAIRDDLLRVLRGVEGVFVRAPQAGSYLFPRLPRLAVSLHDFVKILRLQAGVIVTPGTEFSPHTADSI 378 (405)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCeeEEEEEeCcccCCCHHHHHHHHHHhcCEEEeCchHhCCCCCCeE
Confidence 123567777888888889999987632334434 45666666542 233322 233321 24689
Q ss_pred EEEEcCCCCHHHHHHHHHHHHHHHHH
Q 011842 424 HVVVMPNVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 424 Rv~~~~~~T~edid~~~~~l~~~~~~ 449 (476)
|+++.. +.++++.-++.|.+..++
T Consensus 379 Ris~~~--~~~~l~~al~rl~~~l~~ 402 (405)
T PRK06207 379 RLNFSQ--DHAAAVAAAERIAQLIER 402 (405)
T ss_pred EEEecC--CHHHHHHHHHHHHHHHHH
Confidence 999874 688888888888877654
No 75
>PLN02721 threonine aldolase
Probab=99.91 E-value=1.3e-22 Score=205.39 Aligned_cols=285 Identities=17% Similarity=0.171 Sum_probs=185.2
Q ss_pred HHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHH---HHHHcCCeEEEEeCCCCCc
Q 011842 142 VGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFK---AARMYRMECVKVDCLISGE 218 (476)
Q Consensus 142 ~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~---~~~~~G~~v~~v~~~~~g~ 218 (476)
.++++.+++++|.+. ++++++||++++.++.+... .+++.|++++++|+++.+ .+...|++++.+|.++++.
T Consensus 43 ~~l~~~la~~~~~~~----~~~~~~Gs~a~~~~l~~~~~-~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 117 (353)
T PLN02721 43 LRLEEEMAKIFGKEA----ALFVPSGTMGNLISVLVHCD-VRGSEVILGDNSHIHLYENGGISTLGGVHPRTVKNNEDGT 117 (353)
T ss_pred HHHHHHHHHHhCCce----eEEecCccHHHHHHHHHHcc-CCCCeEEEcCccceehhcccchhhhcCceeEecCCCcCCC
Confidence 344555677777753 78888999999888777543 289999999999988776 5678899999999888889
Q ss_pred cCHHHHHHHHHcCC----CCcEEEEEeeC-CCccccccC---HHHHHHHHHHhCCCCCceEEEEecCcccccccccccCC
Q 011842 219 IDCADFKAKLLQNK----DKPAIINVNIG-TTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAP 290 (476)
Q Consensus 219 ~D~~~Le~~l~~~~----~~p~~vv~t~g-tt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~ 290 (476)
+|+++|++.|.+.. +++.+|++++. ++++|.+.| +++|+++|++||+ ++|+|++|..+.. ...+..
T Consensus 118 ~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~l~~l~~~~g~-----~livD~a~~~~~~-~~~~~~ 191 (353)
T PLN02721 118 MDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTDKVGELAKRHGL-----KLHIDGARIFNAS-VALGVP 191 (353)
T ss_pred cCHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHHHHHHHHHHcCC-----EEEEEchhhhcch-hhhCCC
Confidence 99999999997421 12346666554 567887654 8899999999999 9999999753221 101111
Q ss_pred CCCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHH
Q 011842 291 KVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEV 370 (476)
Q Consensus 291 ~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~ 370 (476)
.......+|++++++|||+++|.+ ++++.++++++.+.....+. .++.... .....+++..+ +...+.+
T Consensus 192 ~~~~~~~~d~~~~s~sK~l~~~~G-~~~~~~~~~~~~~~~~~~~~-------~~~~~~~-~~~~~~~~~~l--~~~~~~~ 260 (353)
T PLN02721 192 VHRLVKAADSVSVCLSKGLGAPVG-SVIVGSKSFIRKAKRLRKTL-------GGGMRQV-GVLAAAALVAL--QENVPKL 260 (353)
T ss_pred HHHHhhhCCEEEEecccccCCcee-eEEecCHHHHHhHHHHHHhc-------CCCeehh-HHHHHHHHHHH--HHHHHHH
Confidence 111223589999999999986533 23555666655432211111 1111111 11111122211 2222334
Q ss_pred HHHHHHHHHHHHHHHhc-CCeE-eecCCeeEEEEecCC-----cHHHhh-----ceee-cccCCEEEEEEcCCCCHHHHH
Q 011842 371 QKCLRNAHYLKDRLLDA-GISA-MLNELSSTVVFERPQ-----DEEFVR-----RWQL-ACQGNIAHVVVMPNVTIDKLD 437 (476)
Q Consensus 371 ~~~~~~a~~l~~~L~~~-g~~~-~~~~~~~iv~f~~~~-----~~~~~~-----~~~l-~~~~~~lRv~~~~~~T~edid 437 (476)
++..++++++.+.|++. ++.. +.++.++++.++.+. ...+.+ ++.+ +.....+|++++..+|++||+
T Consensus 261 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gi~v~~~~~~~lR~~~~~~~~~~~i~ 340 (353)
T PLN02721 261 EDDHKKAKLLAEGLNQIKGLRVNVAAVETNIVYFDITDGSRITAEKLCKSLEEHGVLLMPGNSSRIRVVTHHQISDSDVQ 340 (353)
T ss_pred HHHHHHHHHHHHHHHhCCCcEEecCCccceEEEEEccCCccccHHHHHHHHHhCCcEEecCCCceEEEEecCcCCHHHHH
Confidence 55567888999999987 4433 344556777777653 222322 2223 233478999999999999999
Q ss_pred HHHHHHHHHHH
Q 011842 438 DFLNELIENRS 448 (476)
Q Consensus 438 ~~~~~l~~~~~ 448 (476)
+++++|+++..
T Consensus 341 ~~~~~l~~~~~ 351 (353)
T PLN02721 341 YTLSCFQQAAL 351 (353)
T ss_pred HHHHHHHHHhh
Confidence 99999988754
No 76
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.91 E-value=2.4e-21 Score=199.78 Aligned_cols=289 Identities=12% Similarity=0.016 Sum_probs=206.4
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCc-ccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCC
Q 011842 136 HSRQFEVGVLDWFARLWELENNE-YWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCL 214 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~-~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~ 214 (476)
+..++++++.+++.+..|.+.++ .++++|+|+++++...+.+..+ ||+.|++++++|..+...++.+|++++.+|++
T Consensus 70 G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~~~~--~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~ 147 (399)
T PRK07681 70 GIQEFHEAVTEYYNNTHNVILNADKEVLLLMGSQDGLVHLPMVYAN--PGDIILVPDPGYTAYETGIQMAGATSYYMPLK 147 (399)
T ss_pred CcHHHHHHHHHHHHHHhCCCCCCCCeEEECCCcHHHHHHHHHHhCC--CCCEEEECCCCccchHHHHHhcCCEEEEEecC
Confidence 56789999999999888876444 5699999999999888877765 89999999999999999999999999999997
Q ss_pred CC--CccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCcccccccccccC
Q 011842 215 IS--GEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKA 289 (476)
Q Consensus 215 ~~--g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~ 289 (476)
++ +.+|+++|++++.++++ +|++++|+|+||.+-+ +++|+++|++||+ ||++|++|+.+.+......
T Consensus 148 ~~~~~~~d~~~l~~~~~~~~k---~v~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~-----~iI~De~y~~~~~~~~~~~ 219 (399)
T PRK07681 148 KENDFLPDLELIPEEIADKAK---MMILNFPGNPVPAMAHEDFFKEVIAFAKKHNI-----IVVHDFAYAEFYFDGNKPI 219 (399)
T ss_pred CCCCCcCCHHHHHHhccccce---EEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCe-----EEEEeccchhheeCCCCCC
Confidence 54 46799999998865443 7888899999999977 7889999999999 9999999987655322222
Q ss_pred CCCCCcc--cccEEEEcCCCCCC-CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHh--Chh
Q 011842 290 PKVSFKK--PIGSVSVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRK--GYK 364 (476)
Q Consensus 290 ~~~~~~~--~~Dsi~~s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~--g~~ 364 (476)
+...... ...++..|++|.++ .++++||++.++++++.+.....+. ..+. ..+.+.++...+ +..
T Consensus 220 ~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~~i~~~~l~~~~~~~~~~~-------~~~~---s~~~q~~~~~~l~~~~~ 289 (399)
T PRK07681 220 SFLSVPGAKEVGVEINSLSKSYSLAGSRIGYMIGNEEIVRALTQFKSNT-------DYGV---FLPIQKAACAALRNGAA 289 (399)
T ss_pred ChhhCCCCcccEEEEeecccccCCccceeEEEecCHHHHHHHHHHHhhc-------ccCC---CHHHHHHHHHHHhCcHH
Confidence 2122211 12456678899885 8899999999887776653322221 0111 123344444443 223
Q ss_pred cHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecCC---cHHH----hh--ceeecc-------cCCEEEEEEc
Q 011842 365 GFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERPQ---DEEF----VR--RWQLAC-------QGNIAHVVVM 428 (476)
Q Consensus 365 g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~---~~~~----~~--~~~l~~-------~~~~lRv~~~ 428 (476)
-+++..+.+.++++++.+.|++.|+....++.++.+.+..++ +.++ .+ +..+.. ..+.+|+++.
T Consensus 290 ~~~~~~~~~~~~~~~l~~~L~~~g~~~~~p~~g~f~~~~l~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~ 369 (399)
T PRK07681 290 FCEKNRGIYQERRDTLVDGFRTFGWNVDKPAGSMFVWAEIPKGWTSLSFAYALMDRANVVVTPGHAFGPHGEGFVRIALV 369 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCcccCCCeeeEEEEECCCCCCHHHHHHHHHHhCCEEEeCChhhCcCCCCeEEEEec
Confidence 356666777888889999999988643344455666666553 2222 22 333311 1368999987
Q ss_pred CCCCHHHHHHHHHHHHHH
Q 011842 429 PNVTIDKLDDFLNELIEN 446 (476)
Q Consensus 429 ~~~T~edid~~~~~l~~~ 446 (476)
.+.++++.+++.|+++
T Consensus 370 --~~~~~~~~~l~~l~~~ 385 (399)
T PRK07681 370 --QDEEVLQQAVENIRNS 385 (399)
T ss_pred --CCHHHHHHHHHHHHHh
Confidence 4689999999999874
No 77
>PRK09082 methionine aminotransferase; Validated
Probab=99.91 E-value=7.8e-22 Score=202.45 Aligned_cols=287 Identities=14% Similarity=0.062 Sum_probs=203.2
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcc-cEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCC
Q 011842 136 HSRQFEVGVLDWFARLWELENNEY-WGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCL 214 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~-~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~ 214 (476)
+..++++++.+++.+++|.+.+.. .+++|+|+++|+..++.+... |++.|++++++|.++..+++..|++++.++++
T Consensus 68 G~~~lr~~~a~~l~~~~~~~~~~~~~i~~t~G~~~al~~~~~~~~~--~gd~Vli~~p~y~~~~~~~~~~g~~~~~~~~~ 145 (386)
T PRK09082 68 GVAALREAIAAKTARLYGRQYDADSEITVTAGATEALFAAILALVR--PGDEVIVFDPSYDSYAPAIELAGGRAVRVALQ 145 (386)
T ss_pred CcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCHHHHHHHHHHHHcC--CCCEEEEeCCCchhhHHHHHHcCCEEEEEecC
Confidence 567999999999999999864332 589999999999998887765 89999999999999999999999999999997
Q ss_pred -CCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccc---cCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCC
Q 011842 215 -ISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAV---DDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAP 290 (476)
Q Consensus 215 -~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~i---d~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~ 290 (476)
+++.+|++++++.+.++++ +|++++++++||.+ +++++|+++|++|++ ++++|++|+.+.+......+
T Consensus 146 ~~~~~~d~~~l~~~~~~~~~---~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i-----~li~De~y~~~~~~~~~~~s 217 (386)
T PRK09082 146 PPDFRVDWQRFAAAISPRTR---LIILNTPHNPSGTVWSAADMRALWQLIAGTDI-----YVLSDEVYEHIVFDGAGHAS 217 (386)
T ss_pred cccccCCHHHHHHhcCccce---EEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCE-----EEEEehhhhhhccCCCCCCC
Confidence 4578999999999865443 77788899999977 679999999999999 99999999866553222221
Q ss_pred CCCCc--ccccEEEEcCCCCC-CCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHh--Chhc
Q 011842 291 KVSFK--KPIGSVSVSGHKFV-GCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRK--GYKG 365 (476)
Q Consensus 291 ~~~~~--~~~Dsi~~s~hK~l-~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~--g~~g 365 (476)
..... ..-.++..|+.|.+ ..++++|+++.++++++.+.....+.. +. . ..+.++++...+ ..+.
T Consensus 218 ~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~iv~~~~l~~~~~~~~~~~~-----~~--~---~~~~q~~~~~~l~~~~~~ 287 (386)
T PRK09082 218 VLRHPELRERAFVVSSFGKTYHVTGWKVGYCVAPAALSAEFRKVHQYNT-----FT--V---NTPAQLALADYLRAEPEH 287 (386)
T ss_pred hhhCcCccCcEEEEeechhhccchhhhhhhhhCCHHHHHHHHHHHhhhc-----CC--C---ChHHHHHHHHHHhCChHH
Confidence 11111 12346667889988 478999999999887666543322211 01 1 123333333333 2344
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCeEeecCCee-EEEEecC-----CcHHHhh------ceee-c--------ccCCEEE
Q 011842 366 FQKEVQKCLRNAHYLKDRLLDAGISAMLNELSS-TVVFERP-----QDEEFVR------RWQL-A--------CQGNIAH 424 (476)
Q Consensus 366 ~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~-iv~f~~~-----~~~~~~~------~~~l-~--------~~~~~lR 424 (476)
+++..+.+.++++++.+.|++.++.. .++.++ .+.+..+ ...++.. +..+ + ...+.+|
T Consensus 288 ~~~~~~~~~~~~~~~~~~L~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~R 366 (386)
T PRK09082 288 YLELPAFYQAKRDRFRAALANSRFKL-LPCEGTYFQLVDYSAISDLDDVEFCQWLTREHGVAAIPLSVFYADPFPHRLVR 366 (386)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCcc-cCCCeeEEEEEeccccCCCCHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEE
Confidence 56667777889999999999877643 344444 3444543 1223322 2222 1 1136899
Q ss_pred EEEcCCCCHHHHHHHHHHHHH
Q 011842 425 VVVMPNVTIDKLDDFLNELIE 445 (476)
Q Consensus 425 v~~~~~~T~edid~~~~~l~~ 445 (476)
+++.. ++++++..++.|++
T Consensus 367 i~~~~--~~~~l~~~~~rl~~ 385 (386)
T PRK09082 367 LCFAK--QEETLDAAAERLCQ 385 (386)
T ss_pred EEecC--CHHHHHHHHHHHhh
Confidence 99874 68888888887764
No 78
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.90 E-value=1.3e-21 Score=201.16 Aligned_cols=295 Identities=14% Similarity=0.063 Sum_probs=204.3
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhh---CC--------------------------CcE
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREV---FP--------------------------DGI 186 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~---~p--------------------------~~~ 186 (476)
...++|..+.+...++||.+.. -+-..+|+.||+.+..+.... .| +|.
T Consensus 92 ~~d~ie~l~~~ra~~lf~a~~a---nvqp~Sg~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~ 168 (493)
T PRK13580 92 NVDTVEWEAAEHAKELFGAEHA---YVQPHSGADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQR 168 (493)
T ss_pred hHHHHHHHHHHHHHHHhCCCcc---cccCCCcHHHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCE
Confidence 3568999999999999998753 344569999999998887751 11 677
Q ss_pred EEecCCC---chHHHHHHHHcC--CeEEEEeCC-CCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHH
Q 011842 187 LYASRES---HYSVFKAARMYR--MECVKVDCL-ISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTL 260 (476)
Q Consensus 187 Vl~s~~~---H~S~~~~~~~~G--~~v~~v~~~-~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia 260 (476)
|+.-... |.+......+.| .+++.++++ ++|.+|++++++.+.+.++ .|++++.++. +...|+++|.++|
T Consensus 169 i~~l~l~~GGHlthg~~~n~~~~~~~~~~y~vd~~~g~iD~d~l~~~~~~~~p---lvii~g~S~~-~~~~dl~~i~eia 244 (493)
T PRK13580 169 LLGMSLDSGGHLTHGFRPNISGKMFHQRSYGVDPDTGLLDYDEIAALAREFKP---LILVAGYSAY-PRRVNFAKLREIA 244 (493)
T ss_pred EEeecCCCCCeeecCcccchhhheeeeEecccCcccCccCHHHHHHHHhhcCC---EEEEeCcccc-CCCcCHHHHHHHH
Confidence 7765443 333322223334 356667776 4689999999999988765 6666666777 5577999999999
Q ss_pred HHhCCCCCceEEEEecCcccccccccccCCCCCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCC
Q 011842 261 EESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDA 340 (476)
Q Consensus 261 ~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~ 340 (476)
++||+ ++++|+||+.++++.............+|++++++||++++|. .|++++++++.+.+....+|+++
T Consensus 245 ~~~gA-----~L~VD~AH~~Gligg~~~~~~~~~~~~~D~vtgT~hKaL~GP~-GG~I~~~~~l~~~L~~a~P~i~g--- 315 (493)
T PRK13580 245 DEVGA-----VLMVDMAHFAGLVAGKVFTGDEDPVPHADIVTTTTHKTLRGPR-GGLVLAKKEYADAVDKGCPLVLG--- 315 (493)
T ss_pred HHcCC-----EEEEECchhhceeccccchhhcCCCCCCcEEEeCChhhccCCC-eEEEEecHHHHHHHhhCCCcccC---
Confidence 99999 9999999997777533221111222359999999999997777 48999988876655333345433
Q ss_pred cccCCCCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeec-CCeeEEEEecCCcH----HHh----
Q 011842 341 TIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLN-ELSSTVVFERPQDE----EFV---- 411 (476)
Q Consensus 341 ~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~-~~~~iv~f~~~~~~----~~~---- 411 (476)
+.......+...++.......++++.++.++++++|++.|.+.|+.++.. ..+.++.+..++.. ...
T Consensus 316 ----g~l~p~iAA~avAl~e~~~~ef~~y~~~l~~Na~~La~~L~~~G~~vv~ggTdshIV~V~lg~~~~~g~~a~~~L~ 391 (493)
T PRK13580 316 ----GPLPHVMAAKAVALAEARTPEFQKYAQQVVDNARALAEGFLKRGARLVTGGTDNHLVLIDVTSFGLTGRQAESALL 391 (493)
T ss_pred ----CCccHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHhcCCCccCCCCCCCEEEEEeCCHHHHHHHHHHHHH
Confidence 22222223333344444344567889999999999999999999876532 34677777765421 111
Q ss_pred -hceee-----c---cc---CCEEEEEEcC----CCCHHHHHHHHHHHHHHHHHH
Q 011842 412 -RRWQL-----A---CQ---GNIAHVVVMP----NVTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 412 -~~~~l-----~---~~---~~~lRv~~~~----~~T~edid~~~~~l~~~~~~~ 450 (476)
.++.+ | .+ ...+|++++. .++++||+++++.|.++.+..
T Consensus 392 e~GI~vn~i~~Ptvp~g~~~~srLRIg~~A~ttrg~teedi~~iad~l~~~l~~~ 446 (493)
T PRK13580 392 DAGIVTNRNSIPSDPNGAWYTSGIRLGTPALTTLGMGSDEMDEVAELIVKVLSNT 446 (493)
T ss_pred HCCeEEccccCCCCCCCCCCCceEEeccchhhhcCCCHHHHHHHHHHHHHHHHhh
Confidence 22222 2 22 4679999887 557999999999999887643
No 79
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.90 E-value=3.2e-21 Score=198.28 Aligned_cols=288 Identities=13% Similarity=0.087 Sum_probs=197.8
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCC
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLI 215 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~ 215 (476)
+..++++++.+++++++|.+. ..++|+ |++++..++.+... |++.|+++++.|+++...++..|++++.++.
T Consensus 84 G~~~l~~~l~~~la~~~g~~~---~i~~ts-G~~a~~~~~~~l~~--~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~-- 155 (397)
T PRK06939 84 GTQDLHKELEEKLAKFLGTED---AILYSS-CFDANGGLFETLLG--KEDAIISDALNHASIIDGVRLCKAKRYRYAN-- 155 (397)
T ss_pred CCcHHHHHHHHHHHHHhCCCc---EEEEcC-hHHHHHHHHHHhCC--CCCEEEEEhhhhHHHHHHHHhcCCceEEeCC--
Confidence 345788899999999999752 245555 58898888777655 9999999999999999999999999888775
Q ss_pred CCccCHHHHHHHHHcC---CCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccc-cc-cCC
Q 011842 216 SGEIDCADFKAKLLQN---KDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPF-VK-KAP 290 (476)
Q Consensus 216 ~g~~D~~~Le~~l~~~---~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~-~~-~~~ 290 (476)
.|+++|++.+++. ..++.+|+..+..+++|.+.++++|.++|++||+ |+++|++|+.+.... .. ...
T Consensus 156 ---~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~~~~l~~la~~~~~-----~li~De~~~~g~~~~~~~~~~~ 227 (397)
T PRK06939 156 ---NDMADLEAQLKEAKEAGARHKLIATDGVFSMDGDIAPLPEICDLADKYDA-----LVMVDDSHAVGFVGENGRGTVE 227 (397)
T ss_pred ---CCHHHHHHHHHhhhccCCCCeEEEEecCcCCCCCcCCHHHHHHHHHHhCC-----EEEEECcccccCcCCCCCCHHH
Confidence 4899999988752 1244566666678899999999999999999999 999999996333221 11 001
Q ss_pred CCCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCC-ccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHH
Q 011842 291 KVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSN-VEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKE 369 (476)
Q Consensus 291 ~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~-~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~ 369 (476)
.......+|+++.|+||+++ |+++|+++.++++++.+... ..|. ..++.......++.++++.+. ...+.
T Consensus 228 ~~~~~~~~~i~~~S~sK~~~-g~r~G~v~~~~~~~~~l~~~~~~~~------~~~~~~~~~~~a~~~al~~~~--~~~~~ 298 (397)
T PRK06939 228 HFGVMDRVDIITGTLGKALG-GASGGYTAGRKEVIDWLRQRSRPYL------FSNSLAPAIVAASIKVLELLE--ESDEL 298 (397)
T ss_pred HcCCCCCCcEEEEECHHHhC-ccCceEEEeCHHHHHHHHHhCcccc------ccCCCCHHHHHHHHHHHHHHh--cCHHH
Confidence 12222347899999999996 45789999988877665321 1121 112221111222333444432 23567
Q ss_pred HHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecCC---cHHHh-----hceeec--------ccCCEEEEEEcCCCCH
Q 011842 370 VQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERPQ---DEEFV-----RRWQLA--------CQGNIAHVVVMPNVTI 433 (476)
Q Consensus 370 ~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~---~~~~~-----~~~~l~--------~~~~~lRv~~~~~~T~ 433 (476)
.++..++++++.+.|++.++... ++...++.+..+. ..++. +++.+. .....+|++++..+|+
T Consensus 299 ~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~~~~iRi~~~~~~~~ 377 (397)
T PRK06939 299 RDRLWENARYFREGMTAAGFTLG-PGEHPIIPVMLGDAKLAQEFADRLLEEGVYVIGFSFPVVPKGQARIRTQMSAAHTK 377 (397)
T ss_pred HHHHHHHHHHHHHHHHHcCCCcC-CCCCCEEEEEECCHHHHHHHHHHHHHCCceEeeeCCCCCCCCCceEEEEECCCCCH
Confidence 78888899999999998876433 3334444433332 22232 233221 1235799999998999
Q ss_pred HHHHHHHHHHHHHHHH
Q 011842 434 DKLDDFLNELIENRST 449 (476)
Q Consensus 434 edid~~~~~l~~~~~~ 449 (476)
++|+++++.|+++.++
T Consensus 378 ~~i~~~l~~L~~~~~~ 393 (397)
T PRK06939 378 EQLDRAIDAFEKVGKE 393 (397)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999988765
No 80
>PRK08912 hypothetical protein; Provisional
Probab=99.90 E-value=2.8e-21 Score=198.41 Aligned_cols=291 Identities=14% Similarity=0.072 Sum_probs=203.2
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcc-cEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCC
Q 011842 136 HSRQFEVGVLDWFARLWELENNEY-WGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCL 214 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~-~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~ 214 (476)
+..++++++.+++.+..|++.++. .+++|+|+++|+..++.+... +++.|++++++|..+...++.+|++++.++++
T Consensus 64 G~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~~~~--~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~ 141 (387)
T PRK08912 64 GLPELRQAVAAHYARFQGLDLDPETEVMVTSGATEALAAALLALVE--PGDEVVLFQPLYDAYLPLIRRAGGVPRLVRLE 141 (387)
T ss_pred CcHHHHHHHHHHHHHHhCCCCCCcccEEEeCCcHHHHHHHHHHhcC--CCCEEEEeCCCchhhHHHHHHcCCEEEEEecC
Confidence 457999999999998888764444 699999999999888777655 89999999999999999999999999999986
Q ss_pred C-CCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCcccccccccccCC
Q 011842 215 I-SGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAP 290 (476)
Q Consensus 215 ~-~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~ 290 (476)
+ ++.+|++.|++.+.++++ ++++++++|+||.+-+ +++|+++|++|++ ++++|++|+.+.+....+.+
T Consensus 142 ~~~~~~~~~~l~~~~~~~~~---~v~l~~p~NPtG~~~s~~~~~~i~~~~~~~~~-----~ii~De~y~~~~~~~~~~~~ 213 (387)
T PRK08912 142 PPHWRLPRAALAAAFSPRTK---AVLLNNPLNPAGKVFPREELALLAEFCQRHDA-----VAICDEVWEHVVFDGRRHIP 213 (387)
T ss_pred cccCcCCHHHHHHHhCccce---EEEEeCCCCCcCcccCHHHHHHHHHHHHHCCe-----EEEEhhhhhhcccCCCCCcC
Confidence 4 578999999998866544 7777899999999865 7789999999999 99999999765543212222
Q ss_pred CCCC--cccccEEEEcCCCCCC-CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhC--hhc
Q 011842 291 KVSF--KKPIGSVSVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKG--YKG 365 (476)
Q Consensus 291 ~~~~--~~~~Dsi~~s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g--~~g 365 (476)
.... ....+++..|++|.++ .++++|++++++++++.+.....+. .+..+. ..+.++...+. .+-
T Consensus 214 ~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~~~~l~~~~~~~-----~~~~~~-----~~q~~~~~~l~~~~~~ 283 (387)
T PRK08912 214 LMTLPGMRERTVKIGSAGKIFSLTGWKVGFVCAAPPLLRVLAKAHQFL-----TFTTPP-----NLQAAVAYGLGKPDDY 283 (387)
T ss_pred hhhCCCccCceEEEeechhhccCcCceeEEEecCHHHHHHHHHHHhhc-----cccCCh-----HHHHHHHHHHhCCHHH
Confidence 1221 1124678899999987 7899999999988766553221111 011111 11222222221 233
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecCC------cHHHhh------ceee-cc--------cCCEEE
Q 011842 366 FQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERPQ------DEEFVR------RWQL-AC--------QGNIAH 424 (476)
Q Consensus 366 ~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~------~~~~~~------~~~l-~~--------~~~~lR 424 (476)
+++..++..++++++.+.|++.|+....+....++.+..+. +.++.+ ++.+ +. ..+++|
T Consensus 284 ~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~g~~~l~~~l~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~iR 363 (387)
T PRK08912 284 FEGMRADLARSRDRLAAGLRRIGFPVLPSQGTYFLTVDLAPLGLAEDDVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVR 363 (387)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEecccccCCCCCHHHHHHHHHhcCCEEEecchhhCCCCCCCCEEE
Confidence 46667778889999999999988643333334444444432 222322 2322 11 136899
Q ss_pred EEEcCCCCHHHHHHHHHHHHHHHH
Q 011842 425 VVVMPNVTIDKLDDFLNELIENRS 448 (476)
Q Consensus 425 v~~~~~~T~edid~~~~~l~~~~~ 448 (476)
+++.. .++.++..++.|.+..+
T Consensus 364 l~~~~--~~~~l~~~l~rl~~~l~ 385 (387)
T PRK08912 364 FCFAK--RDATLDEAVERLAAARR 385 (387)
T ss_pred EEEeC--CHHHHHHHHHHHHHHHh
Confidence 99884 47888888888876543
No 81
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.90 E-value=2.5e-21 Score=199.97 Aligned_cols=292 Identities=13% Similarity=0.051 Sum_probs=207.7
Q ss_pred hhHHHHHHHHHHHHHHcCCC-CCcc-cEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeC
Q 011842 136 HSRQFEVGVLDWFARLWELE-NNEY-WGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDC 213 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~-~~~~-~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~ 213 (476)
+..++++++++|+.+..|++ .++. ++++|+|+++++..++.+..+ +|+.|+++.++|..+...++..|++++.+|+
T Consensus 82 G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs~~al~~~~~~~~~--~gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~ 159 (410)
T PRK06290 82 GIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGSKPALAMLPSCFIN--PGDVTLMTVPGYPVTGTHTKYYGGEVYNLPL 159 (410)
T ss_pred CcHHHHHHHHHHHHHHcCCCcCCCcceEEEccCHHHHHHHHHHHhCC--CCCEEEEeCCCCccHHHHHHHcCCEEEEEec
Confidence 56799999999999888875 4433 599999999999888877765 8999999999999999999999999999999
Q ss_pred CCC--CccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCccccccccccc
Q 011842 214 LIS--GEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKK 288 (476)
Q Consensus 214 ~~~--g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~ 288 (476)
+++ +.+|++.|++.+.++++ +|++++|+|+||.+-+ +++|+++|++||+ ||++|++|+.+.+.. ..
T Consensus 160 ~~~~~~~~d~~~l~~~~~~~~k---~i~l~nP~NPTG~v~s~e~l~~l~~la~~~~~-----~iI~DEaY~~~~~~~-~~ 230 (410)
T PRK06290 160 LEENNFLPDLDSIPKDIKEKAK---LLYLNYPNNPTGAVATKEFYEEVVDFAKENNI-----IVVQDAAYAALTFDG-KP 230 (410)
T ss_pred CCCcCCcCCHHHHHHhhcccce---EEEEECCCCCCCcCCCHHHHHHHHHHHHHcCe-----EEEEecchhhceeCC-CC
Confidence 753 56799999998865443 7888889999999977 6788888999999 999999998665422 11
Q ss_pred CCCCCCc--ccccEEEEcCCCCC-CCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhCh-h
Q 011842 289 APKVSFK--KPIGSVSVSGHKFV-GCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGY-K 364 (476)
Q Consensus 289 ~~~~~~~--~~~Dsi~~s~hK~l-~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~-~ 364 (476)
.+..... ...+++..|+.|.+ ++++++|+++.++++++.+.....+... + ...+.+.++...+.. +
T Consensus 231 ~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ii~~~~l~~~l~~~~~~~~~-------~---~~~~~q~aa~~~l~~~~ 300 (410)
T PRK06290 231 LSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAFVVGNELIVKAFATVKDNNDS-------G---QFIAIQKAGIYALDHPE 300 (410)
T ss_pred cChhcCCCccccEEEEeechhhcCCchhheEeEEeCHHHHHHHHHHHhcccc-------C---CcHHHHHHHHHHhhCcH
Confidence 1212221 12457788899988 5889999999988776655332222110 1 112333334444322 2
Q ss_pred cHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEE-EecCC----------cHHHhhc------ee-ec--ccCCEEE
Q 011842 365 GFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVV-FERPQ----------DEEFVRR------WQ-LA--CQGNIAH 424 (476)
Q Consensus 365 g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~-f~~~~----------~~~~~~~------~~-l~--~~~~~lR 424 (476)
-.++..++..++++++.+.|++.|+. +.++..+.+. +..++ ..++.+. +. ++ .-++++|
T Consensus 301 ~~~~~~~~~~~~~~~l~~~L~~~g~~-~~~p~g~f~l~v~lp~~~~~~~~~~~~~~~~~~Ll~~~~v~~~p~~~~~~~lR 379 (410)
T PRK06290 301 ITEKIREKYSRRLDKLVKILNEVGFK-AEMPGGTFYLYVKAPKGTKSGIKFENAEEFSQYLIKEKLISTVPWDDAGHFLR 379 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCe-ecCCCeeeEEEEECCCccccCCCCCCHHHHHHHHHHhCCEEEECCccccCeEE
Confidence 25566777888999999999998764 3344444444 35542 2222221 11 12 1246899
Q ss_pred EEEc-CCCCHHHHHHHHHHHHHHHHH
Q 011842 425 VVVM-PNVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 425 v~~~-~~~T~edid~~~~~l~~~~~~ 449 (476)
+++. +..++|+.++++++|++.+.+
T Consensus 380 i~~~~~~~~~~~~~~~~~~l~~~~~~ 405 (410)
T PRK06290 380 FSVTFEAKDEEEEDRILEEIKRRLSD 405 (410)
T ss_pred EEEEcccccccchhHHHHHHHHHHhh
Confidence 9874 666999999999999888754
No 82
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.90 E-value=4.2e-21 Score=197.38 Aligned_cols=295 Identities=11% Similarity=0.114 Sum_probs=204.6
Q ss_pred hhHHHHHHHHHHHHHHcCCCCC-cccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCC
Q 011842 136 HSRQFEVGVLDWFARLWELENN-EYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCL 214 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~-~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~ 214 (476)
+..++++.+.+++.+..|+..+ +..+++|+|+++|+..++.+... +++.|++..++|..+...++.+|++++.++.+
T Consensus 68 g~~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~--~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~ 145 (391)
T PRK07309 68 GLLELRQAAADFVKEKYNLDYAPENEILVTIGATEALSASLTAILE--PGDKVLLPAPAYPGYEPIVNLVGAEIVEIDTT 145 (391)
T ss_pred CcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhcC--CCCEEEEeCCCCcchHHHHHHcCCEEEEEecC
Confidence 5679999999999888887532 23599999999999998887755 89999999999999999999999999999986
Q ss_pred CC-CccCHHHHHHHHHcCCCCcEEEEEeeCCCcccccc---CHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCC
Q 011842 215 IS-GEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVD---DLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAP 290 (476)
Q Consensus 215 ~~-g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id---~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~ 290 (476)
++ +.+|++.|++++.+...++.++++++++|+||.+- ++++|+++|++|++ ++++|++|+.+.+......+
T Consensus 146 ~~~~~~d~~~l~~~~~~~~~~~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~-----~ii~D~~y~~~~~~~~~~~~ 220 (391)
T PRK07309 146 ENDFVLTPEMLEKAILEQGDKLKAVILNYPANPTGVTYSREQIKALADVLKKYDI-----FVISDEVYSELTYTGEPHVS 220 (391)
T ss_pred CcCCcCCHHHHHHHhhccCCCeEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCc-----EEEEEccccceeeCCCCCCC
Confidence 54 57999999999976433455788888999999874 48999999999999 99999999876543212111
Q ss_pred CCCCcccccEEEEcCCCCCC-CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhCh--hcHH
Q 011842 291 KVSFKKPIGSVSVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGY--KGFQ 367 (476)
Q Consensus 291 ~~~~~~~~Dsi~~s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~--~g~~ 367 (476)
.......-.++..|++|.++ .++++|+++.++++++.+.....|... +. ..+.+.++...+.. ....
T Consensus 221 ~~~~~~~~~i~~~S~SK~~g~~GlRvG~~v~~~~~~~~~~~~~~~~~~-------~~---~~~~q~~~~~~l~~~~~~~~ 290 (391)
T PRK07309 221 IAEYLPDQTILINGLSKSHAMTGWRIGLIFAPAEFTAQLIKSHQYLVT-------AA---TTMAQFAAVEALTNGKDDAL 290 (391)
T ss_pred HHHhccCCEEEEecChhhccCccceeEEEEeCHHHHHHHHHHHhhccc-------CC---ChHHHHHHHHHHhCChhHHH
Confidence 11111112356678899885 889999999998877665432223211 11 12333333333321 1123
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCeEeecCCee-EEEEecCC-----cHHHh------hceeec-c------cCCEEEEEEc
Q 011842 368 KEVQKCLRNAHYLKDRLLDAGISAMLNELSS-TVVFERPQ-----DEEFV------RRWQLA-C------QGNIAHVVVM 428 (476)
Q Consensus 368 ~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~-iv~f~~~~-----~~~~~------~~~~l~-~------~~~~lRv~~~ 428 (476)
...++..++++++.+.|++.++. +.++..+ .+.++.+. +.++. +++.+. . ..+++|+++.
T Consensus 291 ~~~~~~~~~~~~~~~~l~~~~~~-~~~p~gg~~~~~~l~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~ 369 (391)
T PRK07309 291 PMKKEYIKRRDYIIEKMTDLGFK-IIKPDGAFYIFAKIPAGYNQDSFKFLQDFARKKAVAFIPGAAFGPYGEGYVRLSYA 369 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCe-ecCCCeeEEEEEECCCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEec
Confidence 44566677888899999988764 3344443 34445442 12222 233332 1 2468999987
Q ss_pred CCCCHHHHHHHHHHHHHHHHHH
Q 011842 429 PNVTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 429 ~~~T~edid~~~~~l~~~~~~~ 450 (476)
. +.++++..++.|.++.+++
T Consensus 370 ~--~~~~l~~~i~~l~~~~~~~ 389 (391)
T PRK07309 370 A--SMETIKEAMKRLKEYMEEH 389 (391)
T ss_pred C--CHHHHHHHHHHHHHHHHhh
Confidence 4 6789999999998877553
No 83
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.90 E-value=8.9e-21 Score=194.83 Aligned_cols=297 Identities=13% Similarity=0.037 Sum_probs=208.3
Q ss_pred hhhHHHHHHHHHHHHHHcCCCCC-cccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeC
Q 011842 135 VHSRQFEVGVLDWFARLWELENN-EYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDC 213 (476)
Q Consensus 135 ~~~~~le~~~~~~la~l~g~~~~-~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~ 213 (476)
.+..++++++++++++++|.+.+ +..+++|+|+++++..++.+... |++.|+++.+.|..+...++..|++++.+|.
T Consensus 65 ~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~~~~~~~~~--~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~ 142 (389)
T PRK05957 65 QGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFMNAILAITD--PGDEIILNTPYYFNHEMAITMAGCQPILVPT 142 (389)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHHHHHHHHhcC--CCCEEEEeCCCCcCHHHHHHhcCCEEEEeec
Confidence 35679999999999999998533 34589999999999888777655 8999999999998888888889999999999
Q ss_pred CCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCcccccccccccCC
Q 011842 214 LISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAP 290 (476)
Q Consensus 214 ~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~ 290 (476)
+.++.+|+++|++++.++++ +|++++++|+||.+.+ +++|+++|++||+ ++++|++|+.+.+......+
T Consensus 143 ~~~~~~d~~~l~~~i~~~~k---lv~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~-----~li~De~y~~~~~~~~~~~~ 214 (389)
T PRK05957 143 DDNYQLQPEAIEQAITPKTR---AIVTISPNNPTGVVYPEALLRAVNQICAEHGI-----YHISDEAYEYFTYDGVKHFS 214 (389)
T ss_pred CCCCCcCHHHHHHhcCcCce---EEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCc-----EEEEeccchhccCCCCCccC
Confidence 87789999999999976554 7778889999999987 8999999999999 99999999866543222111
Q ss_pred CCCCc-cc-ccEEEEcCCCCCC-CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhC--hhc
Q 011842 291 KVSFK-KP-IGSVSVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKG--YKG 365 (476)
Q Consensus 291 ~~~~~-~~-~Dsi~~s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g--~~g 365 (476)
..... .. -.++..|+.|.++ .++++|++++++++++.+.....+. ..+.+ .+.+.++...+. ..-
T Consensus 215 ~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~~~~~~~~~~~~-------~~~~~---~~~q~~~~~~l~~~~~~ 284 (389)
T PRK05957 215 PGSIPGSGNHTISLYSLSKAYGFASWRIGYMVIPIHLLEAIKKIQDTI-------LICPP---VVSQYAALGALQVGKSY 284 (389)
T ss_pred hhhCCCccCcEEEEecchhhccCccceeEEEecCHHHHHHHHHHHhhc-------ccCCC---cHHHHHHHHHHhCChHH
Confidence 11111 11 2355667789885 7789999999888776664322111 11111 234444444442 223
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCC-eEeecCCee-EEEEecCC---cHHHh----h--ceeecc-------cCCEEEEEE
Q 011842 366 FQKEVQKCLRNAHYLKDRLLDAGI-SAMLNELSS-TVVFERPQ---DEEFV----R--RWQLAC-------QGNIAHVVV 427 (476)
Q Consensus 366 ~~~~~~~~~~~a~~l~~~L~~~g~-~~~~~~~~~-iv~f~~~~---~~~~~----~--~~~l~~-------~~~~lRv~~ 427 (476)
+++..++..++++++.+.|++.+. ..+.++..+ .+.+..+. +.++. + ++.+.. .++++|+++
T Consensus 285 ~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~ 364 (389)
T PRK05957 285 CQQHLPEIAQVRQILLKSLGQLQDRCTLHPANGAFYCFLKVNTDLNDFELVKQLIREYRVAVIPGTTFGMKNGCYLRIAY 364 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCccccCCCeeEEEEEeCCCCCChHHHHHHHHHHCCEEEccchhhCCCCCCEEEEEE
Confidence 577777888899999999988643 234444443 34444432 22332 2 233321 135899998
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHHHh
Q 011842 428 MPNVTIDKLDDFLNELIENRSTWYE 452 (476)
Q Consensus 428 ~~~~T~edid~~~~~l~~~~~~~~~ 452 (476)
.. .++++++..++.|.+..+++.+
T Consensus 365 ~~-~~~~~l~~~~~~l~~~~~~~~~ 388 (389)
T PRK05957 365 GA-LQKATAKEGIERLVQGLKTIVQ 388 (389)
T ss_pred ec-CCHHHHHHHHHHHHHHHHhhhc
Confidence 53 4688888888888887776654
No 84
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.90 E-value=2.8e-21 Score=203.78 Aligned_cols=298 Identities=10% Similarity=-0.017 Sum_probs=202.8
Q ss_pred hhhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHH-hhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeC
Q 011842 135 VHSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGR-EVFPDGILYASRESHYSVFKAARMYRMECVKVDC 213 (476)
Q Consensus 135 ~~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~-~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~ 213 (476)
.+..++++++.+|+.+..|++.++.++++|+|+++++..++.+.. + |||.|+++.++|.++...++..|++++.+++
T Consensus 115 ~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~--~gD~Vlv~~P~y~~y~~~~~~~g~~~v~v~~ 192 (481)
T PTZ00377 115 AGYPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIGD--PSDGVMIPIPQYPLYSAAITLLGGKQVPYYL 192 (481)
T ss_pred cCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhccC--CCCEEEECCCCchhHHHHHHHcCCEEEEEEe
Confidence 367899999999999888877655679999999999999988876 5 8999999999999999999999999999998
Q ss_pred CCC--CccCHHHHHHHHHcC---CCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCcccccccc
Q 011842 214 LIS--GEIDCADFKAKLLQN---KDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPF 285 (476)
Q Consensus 214 ~~~--g~~D~~~Le~~l~~~---~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~ 285 (476)
+++ +.+|+++|++++.+. ..++.++++++++|+||.+-+ +++|+++|++|++ ||++|++|+...+..
T Consensus 193 ~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~~-----~iI~De~Y~~l~~~~ 267 (481)
T PTZ00377 193 DEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYEKGI-----VLMADEVYQENIYDG 267 (481)
T ss_pred ccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCC-----EEEEehhhHhhccCC
Confidence 743 579999999999752 113447777789999999977 8999999999999 999999998665421
Q ss_pred c-ccCCCC----CCcc----ccc-EEEEcCCCCC--CCCCCceeEEe---ehhhhhhhcCCccccCCCCCcccCCCCChh
Q 011842 286 V-KKAPKV----SFKK----PIG-SVSVSGHKFV--GCPMPCGVQIT---RMEHINVLSSNVEYLASRDATIMGSRNGHA 350 (476)
Q Consensus 286 ~-~~~~~~----~~~~----~~D-si~~s~hK~l--~~p~~~G~l~~---~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~ 350 (476)
. ...+.. +... ... ++..|+.|.+ ++++++||+++ ++++++.+...... . .+ . .
T Consensus 268 ~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p~~li~~l~~~~~~------~-~~-~---~ 336 (481)
T PTZ00377 268 EKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIPPEVREQIYKLASI------N-LC-S---N 336 (481)
T ss_pred CCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEEEEEeCCCHHHHHHHHHHhhe------e-cC-C---C
Confidence 1 111100 1111 011 3445788953 37999999987 56666655322111 0 01 1 1
Q ss_pred HHHHHHHHHHhC-----hhc---H----HHHHHHHHHHHHHHHHHHHhcCCeEeecCCe-eEEEEecC--C---------
Q 011842 351 PIFLWYTLNRKG-----YKG---F----QKEVQKCLRNAHYLKDRLLDAGISAMLNELS-STVVFERP--Q--------- 406 (476)
Q Consensus 351 ~l~~~~~l~~~g-----~~g---~----~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~-~iv~f~~~--~--------- 406 (476)
.+.+.++...+. ... + ++..+++.++++++.+.|++.+...+..|.. ..+++..+ .
T Consensus 337 ~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~g~~~~~p~gg~fl~~~~~l~~~~~~~~~~~ 416 (481)
T PTZ00377 337 VVGQLMTGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNKIEGVSCQPVEGAMYAFPRIELPEKAIQEAKER 416 (481)
T ss_pred hHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCeeEEEEeeccCchhhHHHHHhc
Confidence 244444444431 111 2 2223345677888999998873334444544 44443322 1
Q ss_pred ----cHHH----hh--ceee-cc-------cCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHh
Q 011842 407 ----DEEF----VR--RWQL-AC-------QGNIAHVVVMPNVTIDKLDDFLNELIENRSTWYE 452 (476)
Q Consensus 407 ----~~~~----~~--~~~l-~~-------~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~~ 452 (476)
+..+ .+ +..+ +. ..+.+|+++. .+.++++..++.|.+..+.+++
T Consensus 417 ~~~~~~~~~~~ll~~~gV~v~pG~~F~~~~~~~~~Rls~~--~~~e~l~~~l~rl~~~~~~~~~ 478 (481)
T PTZ00377 417 GLAPDVLYCLELLESTGIVVVPGSGFGQKPGTYHFRITIL--PPEEQIEEMVKKIKEFHESFMK 478 (481)
T ss_pred CCCcHHHHHHHHHHHcCEEEeCCcccCCCCCCCEEEEEEC--CCHHHHHHHHHHHHHHHHHHHH
Confidence 1111 11 2222 11 1258999987 7789999999999999888775
No 85
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.90 E-value=2.9e-21 Score=200.67 Aligned_cols=295 Identities=16% Similarity=0.025 Sum_probs=201.6
Q ss_pred hHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCC--
Q 011842 137 SRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCL-- 214 (476)
Q Consensus 137 ~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~-- 214 (476)
..++++++.+++.+..|.+.+...+++|+|+++|+.+++.+..+ ||+.|++++++|..+...+.+.|++++.+++.
T Consensus 96 ~~~lr~aia~~~~~~~~~~~~~~~v~it~G~~~al~l~~~~l~~--~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~ 173 (430)
T PLN00145 96 LLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQAIEIIMSVLAQ--PGANILLPRPGYPLYEARAVFSGLEVRHFDLLPE 173 (430)
T ss_pred CHHHHHHHHHHHhhccCCCCChhhEEEeCCHHHHHHHHHHHhcC--CCCEEEEcCCCCccHHHHHHHcCCEEEEeeCCcc
Confidence 45899999999888777765556799999999999998888765 99999999999999999999999999999874
Q ss_pred CCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCC
Q 011842 215 ISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPK 291 (476)
Q Consensus 215 ~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~ 291 (476)
.++.+|+++|++.+.++++ ++++++|+|+||.+.+ +++|+++|++||+ ++++|++|+.+.+......+.
T Consensus 174 ~~~~~d~~~l~~~~~~~~~---~i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i-----~ii~De~Y~~~~~~~~~~~~~ 245 (430)
T PLN00145 174 RGWEVDLEGVEALADENTV---AMVIINPNNPCGSVYSYEHLAKIAETARKLGI-----LVIADEVYDHLTFGSKPFVPM 245 (430)
T ss_pred cCCcCCHHHHHHHhCcCce---EEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCC-----EEEEeccchhhccCCCCccch
Confidence 3578999999998877664 7888889999999987 8889999999999 999999998765532222221
Q ss_pred CCCccc-ccEEEEcCCC-CCCCCCCceeEEeeh--hhhhhh---cCCccccCCCCCcccCCCCChhHHHHHHHHHHhC--
Q 011842 292 VSFKKP-IGSVSVSGHK-FVGCPMPCGVQITRM--EHINVL---SSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKG-- 362 (476)
Q Consensus 292 ~~~~~~-~Dsi~~s~hK-~l~~p~~~G~l~~~~--~~~~~l---~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g-- 362 (476)
..+... --++..|+.| |++++|++||+++.+ .+++.. .....+. .+..+. ..+.++++...+.
T Consensus 246 ~~~~~~~~vi~~~S~SK~~~~pG~RlG~iv~~~~~~~~~~~~~~~~~~~~~-----~~~~~~---~~~~Q~a~~~~l~~~ 317 (430)
T PLN00145 246 GVFGEVAPVLTLGSISKRWVVPGWRLGWIATCDPNGILKETKVVDSIRNYL-----NISTDP---ATFVQGAIPQIIANT 317 (430)
T ss_pred hhhcccCcEEEEeccccccCCCCeeEEEEEEecchhhhhhhHHHHHHHHHh-----cccCCC---CHHHHHHHHHHHhcC
Confidence 111111 1234445666 588999999999742 222210 0001111 011111 1344444444442
Q ss_pred -hhcHHHHHHHHHHHHHHHHHHHHhc-CCeEe-ecCCeeEEEEecC--------CcHHHhh------ceee-cc----cC
Q 011842 363 -YKGFQKEVQKCLRNAHYLKDRLLDA-GISAM-LNELSSTVVFERP--------QDEEFVR------RWQL-AC----QG 420 (476)
Q Consensus 363 -~~g~~~~~~~~~~~a~~l~~~L~~~-g~~~~-~~~~~~iv~f~~~--------~~~~~~~------~~~l-~~----~~ 420 (476)
..-+++.+++.+++++++.+.|++. ++... .+..++.+.+..+ ++.++.. +..+ +. ..
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~P~ga~y~~v~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~ 397 (430)
T PLN00145 318 KEEFFTKTLGLLKETADICYEKIKEIKCITCPHKPEGSMFVMVKLDLSCLSGIKDDMDFCCKLAKEESVVVLPGSALGMK 397 (430)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcCCCeeeEEEeccChhhcCCCCCHHHHHHHHHHhCCEEEeCccccCCC
Confidence 2346778888889999999999886 44333 3445566665543 1223332 1222 21 23
Q ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 011842 421 NIAHVVVMPNVTIDKLDDFLNELIENRSTWY 451 (476)
Q Consensus 421 ~~lRv~~~~~~T~edid~~~~~l~~~~~~~~ 451 (476)
+++|+++. ...++++..++.|.+...+..
T Consensus 398 ~~lRis~~--~~~~~l~~al~rl~~~~~~~~ 426 (430)
T PLN00145 398 NWLRITFA--IDPPSLEDGLERLKSFCLRHA 426 (430)
T ss_pred CeEEEEeC--CCHHHHHHHHHHHHHHHHHhc
Confidence 79999987 367888888888877766544
No 86
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.90 E-value=4.2e-21 Score=200.44 Aligned_cols=299 Identities=14% Similarity=0.118 Sum_probs=201.5
Q ss_pred hHHHHHHHHHHHHHHcCCCCCcccEEE-cCCchhHHHHHHHHHHhhCCCcEEEecC------CCchHHHHHHHHcCCeEE
Q 011842 137 SRQFEVGVLDWFARLWELENNEYWGYI-TNCGTEGNLHGILVGREVFPDGILYASR------ESHYSVFKAARMYRMECV 209 (476)
Q Consensus 137 ~~~le~~~~~~la~l~g~~~~~~~g~~-t~ggt~An~~al~aa~~~~p~~~Vl~s~------~~H~S~~~~~~~~G~~v~ 209 (476)
..++|+.+.+...++|+...+....-+ +.+|+.||+.++.+... |++.|+..+ .+|.+.....++.+....
T Consensus 78 ~d~lE~~~~~~~~~~f~~~~~~~~~nv~~~SG~~AN~av~~aL~~--pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~ 155 (475)
T PLN03226 78 IDQIETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFAVYTALLQ--PHDRIMGLDLPHGGHLSHGYQTDGKKISATSIY 155 (475)
T ss_pred HHHHHHHHHHHHHHHhCCCcceeEEecCcCchHHHHHHHHHHhCC--CCCEEEECCCCcCcchhhhhhhcccccccceEE
Confidence 467888788888999998754211111 37999999999988876 999999844 455555555544444322
Q ss_pred ----EEeCC-CCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCccccccc
Q 011842 210 ----KVDCL-ISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMP 284 (476)
Q Consensus 210 ----~v~~~-~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~ 284 (476)
.++++ ++|.+|+++|++.+.+.. |.+|++ +.+.+|..-|+++|.++|++||+ ++++|+||+.++++
T Consensus 156 ~~~~~y~~~~~~g~iD~d~Le~~l~~~~--pklIv~--~~S~~s~~~D~a~i~~ia~~~ga-----~LlvD~AH~~Gli~ 226 (475)
T PLN03226 156 FESMPYRLDESTGLIDYDKLEKKAMLFR--PKLIIA--GASAYPRDWDYARMRKIADKVGA-----LLMCDMAHISGLVA 226 (475)
T ss_pred EEeeeeeecCCCCCcCHHHHHHHHhhcC--CeEEEE--ecCcCCCccCHHHHHHHHHHcCC-----EEEEEchhhhCccc
Confidence 44555 468999999999997542 335544 23457788899999999999999 99999999877664
Q ss_pred ccccCCCCCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCC----ccc--cCCC--CCcccCCCCChhHHHHHH
Q 011842 285 FVKKAPKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSN----VEY--LASR--DATIMGSRNGHAPIFLWY 356 (476)
Q Consensus 285 ~~~~~~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~----~~y--l~~~--~~~~~~sr~~~~~l~~~~ 356 (476)
.......+ +.+|++++++||||++|.| |+++++++..+.+... .+| .... ...+.++.+.....++.+
T Consensus 227 ~~~~~~p~---~~~Div~~t~hK~L~GP~G-g~I~~~~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~a 302 (475)
T PLN03226 227 AQEAASPF---EYCDVVTTTTHKSLRGPRG-GMIFFRKGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAV 302 (475)
T ss_pred CCCCCCCC---CCCeEEEecCcccccCCCc-eEEEEchhhcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHH
Confidence 33222112 2499999999999988888 8888887543211000 011 0010 112344444344556777
Q ss_pred HHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeec-CCeeEEEEec-C---CcHHH---hhcee-------ecc---
Q 011842 357 TLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLN-ELSSTVVFER-P---QDEEF---VRRWQ-------LAC--- 418 (476)
Q Consensus 357 ~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~-~~~~iv~f~~-~---~~~~~---~~~~~-------l~~--- 418 (476)
+++.+...+++++.++..+++++|++.|++.|+.++.+ ..++++.+.. + ...+. +.... +|.
T Consensus 303 Al~~i~~~~~~~~~~~~~~na~~L~~~L~~~G~~l~~~~t~~hi~lv~~~~~gi~~~~~~~~L~~~~I~~nk~~~p~~~~ 382 (475)
T PLN03226 303 ALKQAMTPEFKAYQKQVKANAAALANRLMSKGYKLVTGGTDNHLVLWDLRPLGLTGSRVEKVLDLAHITLNKNAVPGDSS 382 (475)
T ss_pred HHHHHhCcCHHHHHHHHHHHHHHHHHHHHhCCCEEEcCCCCCCEEEEEccCCCCCHHHHHHHHHHCCCEECCCCCCCCcc
Confidence 78877667888999999999999999999999876653 2245555543 2 12112 22111 111
Q ss_pred --cCCEEEE----EEcCCCCHHHHHHHHHHHHHHHHHH
Q 011842 419 --QGNIAHV----VVMPNVTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 419 --~~~~lRv----~~~~~~T~edid~~~~~l~~~~~~~ 450 (476)
....+|+ .++..++++|++++.+.|.++++..
T Consensus 383 ~~~~~giRiGt~~lt~~g~~~~d~~~ia~~i~~~~~~~ 420 (475)
T PLN03226 383 ALVPGGVRIGTPAMTSRGLVEKDFEKVAEFLHRAVTIA 420 (475)
T ss_pred cCCCCCcccCcHHHHHCCCCHHHHHHHHHHHHHHHHHh
Confidence 2345887 5788889999999999999988753
No 87
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.90 E-value=6.1e-22 Score=200.84 Aligned_cols=287 Identities=14% Similarity=0.087 Sum_probs=202.8
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCC-chhHHHHHHHHHHh-hCCCcEEEecCCCchHHHHHHHHcCCeEEEEeC
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNC-GTEGNLHGILVGRE-VFPDGILYASRESHYSVFKAARMYRMECVKVDC 213 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~g-gt~An~~al~aa~~-~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~ 213 (476)
...++.+++++.+++++|.+. ++..+||+| +|+|+..++..... ..++++|++....|.+ .+.++..|++++.++.
T Consensus 41 ~~~~~~~~~r~~l~~l~~~~~-~~~vvf~~gs~T~a~~~~~~~l~~~~~~~~~i~~g~~~~~~-~~~a~~~g~~~~~~~~ 118 (355)
T cd00611 41 DFEAIVNEAESDLRELLNIPD-NYKVLFLQGGATGQFAAVPLNLLGDKGTADYVVTGAWSAKA-AKEAKRYGGVVVIVAA 118 (355)
T ss_pred HHHHHHHHHHHHHHHHhCCCC-CceEEEEcCCchHHHHHHHHhcCCCCCeEEEEECCHHHHHH-HHHHHhcCCCcEEEec
Confidence 455788899999999999853 456889988 99998887777532 1256677776555544 4466778999999998
Q ss_pred CCCCcc-C-HHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCC
Q 011842 214 LISGEI-D-CADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPK 291 (476)
Q Consensus 214 ~~~g~~-D-~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~ 291 (476)
+++|.. + ++..+..+.++++ +|.+++.+|.+|.+- . ++++.||+ +++||++++.+..|
T Consensus 119 ~~~g~~~~~~~~~~~~~~~~~~---lV~~~h~~t~tG~~~--~---~i~~~~g~-----~~~VDa~qs~g~~~------- 178 (355)
T cd00611 119 KEEGKYTKIPDVETWDLAPDAA---YVHYCSNETIHGVEF--D---EVPDTGGV-----PLVADMSSNILSRP------- 178 (355)
T ss_pred ccccCCCCCCCHhhcCCCCCCC---EEEEeCCcccccEEc--c---eecccCCC-----eEEEEccccccCCC-------
Confidence 655433 4 2323333444444 899999999999982 2 44556999 99999999988777
Q ss_pred CCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCC-ccccCC----CCCcccCCCCChhHHHHHHHHHHhChh-c
Q 011842 292 VSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSN-VEYLAS----RDATIMGSRNGHAPIFLWYTLNRKGYK-G 365 (476)
Q Consensus 292 ~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~-~~yl~~----~~~~~~~sr~~~~~l~~~~~l~~~g~~-g 365 (476)
+++.+ .|...+++||+++ |.|+|+++++++.++.+... +.+... ......++.+....+++.++++++..+ |
T Consensus 179 idv~~-~~~~~ss~~K~lG-P~G~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tpn~~~i~~L~aal~~l~~~gg 256 (355)
T cd00611 179 IDVSK-FGVIYAGAQKNLG-PAGVTVVIVRKDLLGKARKITPSMLNYKTHADNNSLYNTPPTFAIYMMGLVLKWLKEQGG 256 (355)
T ss_pred CCHHH-hCEEEeecccccC-CCceEEEEECHHHHhhcccCCCCcccHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHcCC
Confidence 55543 3555566999886 99999999999877654322 122210 111124677666677888999998777 7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhc-CCeEe-ecC--Ce-eEEEEecCC---cHHHh-----hceeecc---cCCEEEEEEcC
Q 011842 366 FQKEVQKCLRNAHYLKDRLLDA-GISAM-LNE--LS-STVVFERPQ---DEEFV-----RRWQLAC---QGNIAHVVVMP 429 (476)
Q Consensus 366 ~~~~~~~~~~~a~~l~~~L~~~-g~~~~-~~~--~~-~iv~f~~~~---~~~~~-----~~~~l~~---~~~~lRv~~~~ 429 (476)
++++.++..++++++++.|++. |+... ..+ .+ .+++|..++ ..++. +++.... ..+.+|+++++
T Consensus 257 ~e~i~~~~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~vvsf~~~~~~l~~~~~~~~~r~G~~~~~~~~~~g~vR~S~~~ 336 (355)
T cd00611 257 VEAMEKRNRQKAQLLYDTIDNSNGFYRGPVDKRARSRMNVPFRLGKEELEKEFLKEAEAAGMIGLKGHRSVGGIRASIYN 336 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCccccccCCCHHHcCceEEEEEcCChhhhHHHHHHHHHCCCcccCCCcccCeEEEEccC
Confidence 9999999999999999999998 64212 111 23 458888665 22221 3333221 13689999999
Q ss_pred CCCHHHHHHHHHHHHHH
Q 011842 430 NVTIDKLDDFLNELIEN 446 (476)
Q Consensus 430 ~~T~edid~~~~~l~~~ 446 (476)
++|.+|||+|+++|+++
T Consensus 337 ~nt~edi~~l~~al~~~ 353 (355)
T cd00611 337 ALSLEGVQALADFMKEF 353 (355)
T ss_pred CCCHHHHHHHHHHHHHH
Confidence 99999999999999875
No 88
>PRK07682 hypothetical protein; Validated
Probab=99.90 E-value=2.9e-21 Score=197.65 Aligned_cols=290 Identities=9% Similarity=0.049 Sum_probs=206.8
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCc-ccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCC
Q 011842 136 HSRQFEVGVLDWFARLWELENNE-YWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCL 214 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~-~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~ 214 (476)
+..++++++.+|+.+.+|.+.+. ..+++|+|+++|+..++.+..+ |++.|++++++|..+...++..|.+++.++.+
T Consensus 58 g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~l~~--~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~ 135 (378)
T PRK07682 58 GLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQALDVAMRAIIN--PGDEVLIVEPSFVSYAPLVTLAGGVPVPVATT 135 (378)
T ss_pred CcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhCC--CCCEEEEeCCCchhhHHHHHHcCCEEEEeecC
Confidence 56799999999999988875433 2599999999999988877765 89999999999999999999999999999875
Q ss_pred C--CCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCcccccccccccC
Q 011842 215 I--SGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKA 289 (476)
Q Consensus 215 ~--~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~ 289 (476)
. ++.+|+++|++++.++++ +++++++.|+||.+-+ +++|+++|++|++ ++++|++|+.+.+.. ...
T Consensus 136 ~~~~~~~d~~~l~~~~~~~~~---~v~~~~p~NPtG~~~s~~~~~~l~~~~~~~~~-----~ii~De~y~~~~~~~-~~~ 206 (378)
T PRK07682 136 LENEFKVQPAQIEAAITAKTK---AILLCSPNNPTGAVLNKSELEEIAVIVEKHDL-----IVLSDEIYAELTYDE-AYT 206 (378)
T ss_pred CccCCCCCHHHHHhhcCcccE---EEEEECCCCCcCcCcCHHHHHHHHHHHHHcCc-----EEEEehhhhhcccCC-CCC
Confidence 3 568999999998866543 6777889999999854 8899999999999 999999998765432 111
Q ss_pred C--CCCCcccccEEEEcCCCCCC-CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHh--Chh
Q 011842 290 P--KVSFKKPIGSVSVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRK--GYK 364 (476)
Q Consensus 290 ~--~~~~~~~~Dsi~~s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~--g~~ 364 (476)
+ .+.....-.++..|+.|.++ +++++|++++++++++.+.....+.. .+ ...+.+.++...+ +..
T Consensus 207 ~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~~~i~~l~~~~~~~~-------~~---~~~~~q~a~~~~l~~~~~ 276 (378)
T PRK07682 207 SFASIKGMRERTILISGFSKGFAMTGWRLGFIAAPVYFSEAMLKIHQYSM-------MC---APTMAQFAALEALRAGND 276 (378)
T ss_pred ChhhcccccCCEEEEecCcccccChhhhhhhhhcCHHHHHHHHHHHHhhc-------cC---CCHHHHHHHHHHHhCChH
Confidence 1 11111123467778899987 78899999999887766543222210 01 1234444444444 223
Q ss_pred cHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEE-ecC----CcHHHh------hceeecc-------cCCEEEEE
Q 011842 365 GFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVF-ERP----QDEEFV------RRWQLAC-------QGNIAHVV 426 (476)
Q Consensus 365 g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f-~~~----~~~~~~------~~~~l~~-------~~~~lRv~ 426 (476)
.+++..+++.++++++.+.|++.|+.. ..+..+.+.| ..+ ++.++. +++.+.. ..+++|++
T Consensus 277 ~~~~~~~~~~~~~~~~~~~L~~~~~~~-~~p~g~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~iRis 355 (378)
T PRK07682 277 DVIRMRDSYRKRRNFFVTSFNEIGLTC-HVPGGAFYAFPSISSTGLSSEEFAEQLLLEEKVAVVPGSVFGESGEGFIRCS 355 (378)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCcc-CCCCeeEEEEEeccCCCCCHHHHHHHHHHhCCEEEcCchhhCcCCCCeEEEE
Confidence 466777888899999999999987643 3444444433 331 122222 1333321 24789999
Q ss_pred EcCCCCHHHHHHHHHHHHHHHHH
Q 011842 427 VMPNVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 427 ~~~~~T~edid~~~~~l~~~~~~ 449 (476)
+.. +.++++..++.|++..++
T Consensus 356 ~~~--~~~~l~~~l~~l~~~l~~ 376 (378)
T PRK07682 356 YAT--SLEQLQEAMKRMKRFVEN 376 (378)
T ss_pred eCC--CHHHHHHHHHHHHHHHhh
Confidence 874 689999999999887653
No 89
>PLN02187 rooty/superroot1
Probab=99.90 E-value=3.5e-21 Score=201.59 Aligned_cols=298 Identities=17% Similarity=0.027 Sum_probs=205.1
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCC-
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCL- 214 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~- 214 (476)
+..++++++++|+.+.+|.+.++.++++|+|+++++..++.+..+ ||+.|++++++|..+...++..|++++.+++.
T Consensus 109 G~~~lR~aiA~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~--pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~~l~~ 186 (462)
T PLN02187 109 GILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQGIEIVFESLAR--PNANILLPRPGFPHYDARAAYSGLEVRKFDLLP 186 (462)
T ss_pred ChHHHHHHHHHHHHHhcCCCCCcccEEEeCCHHHHHHHHHHHhcC--CCCEEEEeCCCCccHHHHHHHcCCEEEEEeCcc
Confidence 567899999999988777654555799999999999999888765 99999999999999999999999999999884
Q ss_pred -CCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCcccccccccccCC
Q 011842 215 -ISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAP 290 (476)
Q Consensus 215 -~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~ 290 (476)
.++.+|+++|++++.++++ ++++++|+|+||.+-+ +++|+++|++||+ ||++|++|+.+.+......+
T Consensus 187 ~~~~~~d~~~l~~~~~~~~~---~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i-----~iI~DE~Y~~l~f~~~~~~s 258 (462)
T PLN02187 187 EKEWEIDLEGIEAIADENTV---AMVVINPNNPCGNVYSHDHLKKVAETARKLGI-----MVISDEVYDRTIFGDNPFVS 258 (462)
T ss_pred ccCCccCHHHHHHhcCCCcE---EEEEeCCCCCCCCccCHHHHHHHHHHHHHCCC-----EEEEeccccccccCCCCcee
Confidence 3578999999998866554 7888889999999866 8899999999999 99999999876553211111
Q ss_pred CCCCcccc-cEEEEcCCCC-CCCCCCceeEEeeh-h-h---hhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhC-
Q 011842 291 KVSFKKPI-GSVSVSGHKF-VGCPMPCGVQITRM-E-H---INVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKG- 362 (476)
Q Consensus 291 ~~~~~~~~-Dsi~~s~hK~-l~~p~~~G~l~~~~-~-~---~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g- 362 (476)
...+.... -++..|+.|. +.+++++||+++.+ + . ++.+.....+. .+..+. ..+.++++...+.
T Consensus 259 ~~~~~~~~~vi~l~SfSK~f~~pGlRiG~~v~~~p~~~~~~~~~~~~~~~~~-----~~~~~~---s~~~Q~a~~~~L~~ 330 (462)
T PLN02187 259 MGKFASIVPVLTLAGISKGWVVPGWKIGWIALNDPEGVFETTKVLQSIKQNL-----DVTPDP---ATIIQAALPAILEK 330 (462)
T ss_pred HHHhccCCcEEEEecchhhcCCccceeEEEEecCchhHHHHHHHHHHHHHhc-----cccCCC---CHHHHHHHHHHHhc
Confidence 11111111 2344567776 88899999999853 2 2 12222111111 011111 1344444444442
Q ss_pred --hhcHHHHHHHHHHHHHHHHHHHHhcCCeE-eecC-CeeEEEEecC--------CcHHHhh------ceee-cc----c
Q 011842 363 --YKGFQKEVQKCLRNAHYLKDRLLDAGISA-MLNE-LSSTVVFERP--------QDEEFVR------RWQL-AC----Q 419 (476)
Q Consensus 363 --~~g~~~~~~~~~~~a~~l~~~L~~~g~~~-~~~~-~~~iv~f~~~--------~~~~~~~------~~~l-~~----~ 419 (476)
.+-+++..+.+.++++++.+.|++.+... ...| .++.+.+..+ ++.++.. +..+ +. .
T Consensus 331 ~~~~~l~~~~~~l~~~r~~l~~~L~~~~~~~~~~~P~gg~fl~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~ 410 (462)
T PLN02187 331 ADKNFFAKKNKILKHNVDLVCDRLKDIPCVVCPKKPESCTYLLTKLELSLMDNIKDDIDFCVKLAREENLVFLPGDALGL 410 (462)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCCCCCEeEEEEeecChhhCCCCCCHHHHHHHHHhhCCEEEECccccCC
Confidence 23467777888889999999999876543 2234 4455555432 1222221 2222 21 2
Q ss_pred CCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhc
Q 011842 420 GNIAHVVVMPNVTIDKLDDFLNELIENRSTWYED 453 (476)
Q Consensus 420 ~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~~~ 453 (476)
.+++|+++. +.++.++..++.|.+..++.+|.
T Consensus 411 ~~~iRis~~--~~~e~l~~al~rL~~~l~~~~~~ 442 (462)
T PLN02187 411 KNWMRITIG--VEAHMLEDALERLKGFCTRHAKK 442 (462)
T ss_pred CCeEEEEeC--CCHHHHHHHHHHHHHHHHHhhhc
Confidence 478999986 46899999999999988776653
No 90
>PRK07324 transaminase; Validated
Probab=99.90 E-value=2.5e-21 Score=197.81 Aligned_cols=284 Identities=14% Similarity=0.075 Sum_probs=192.3
Q ss_pred hHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCC
Q 011842 137 SRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLIS 216 (476)
Q Consensus 137 ~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~ 216 (476)
..++++++.+++. ++++ ..+++|+|+++|+..++.+... ||+.|+++.++|.++...++..|++++.+|++.+
T Consensus 64 ~~~lr~~ia~~~~---~~~~--~~vi~t~G~~~al~~~~~~l~~--~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~ 136 (373)
T PRK07324 64 SPEFKEAVASLYQ---NVKP--ENILQTNGATGANFLVLYALVE--PGDHVISVYPTYQQLYDIPESLGAEVDYWQLKEE 136 (373)
T ss_pred CHHHHHHHHHHhc---CCCh--hhEEEcCChHHHHHHHHHHhCC--CCCEEEEcCCCchhHHHHHHHcCCEEEEEecccc
Confidence 4577777766653 3443 3589999999999999888765 8999999999999999999999999999998743
Q ss_pred --CccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCC
Q 011842 217 --GEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPK 291 (476)
Q Consensus 217 --g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~ 291 (476)
+.+|+++|++.+.++++ +|++++++|+||.+-+ +++|+++|++||+ ++++|++|...... ....+.
T Consensus 137 ~~~~~d~~~l~~~~~~~~k---li~i~~p~NPtG~~~~~~~l~~i~~~a~~~~~-----~ii~De~y~~l~~~-~~~~s~ 207 (373)
T PRK07324 137 NGWLPDLDELRRLVRPNTK---LICINNANNPTGALMDRAYLEEIVEIARSVDA-----YVLSDEVYRPLDED-GSTPSI 207 (373)
T ss_pred cCCCCCHHHHHHhCCCCCc---EEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCC-----EEEEEccccccccC-CCCCCh
Confidence 45899999998876655 8888999999999977 8999999999999 99999999765442 111111
Q ss_pred CCCcccccEEEEcCCCCCC-CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhC--hhcHHH
Q 011842 292 VSFKKPIGSVSVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKG--YKGFQK 368 (476)
Q Consensus 292 ~~~~~~~Dsi~~s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g--~~g~~~ 368 (476)
.+..+. .+...++.|.++ +++++|++++++++++.+.....|. ++.. ..+.++++...+. ..-+++
T Consensus 208 ~~~~~~-~I~~~s~SK~~~~~G~RiG~i~~~~~li~~~~~~~~~~-----~~~~-----~~~~q~~a~~~l~~~~~~l~~ 276 (373)
T PRK07324 208 ADLYEK-GISTNSMSKTYSLPGIRVGWIAANEEVIDILRKYRDYT-----MICA-----GVFDDMLASLALEHRDAILER 276 (373)
T ss_pred hhccCC-EEEEecchhhcCCccceeEEEecCHHHHHHHHHHhCcE-----EecC-----ChHHHHHHHHHHcCHHHHHHH
Confidence 222122 245567889876 7899999999877766664333331 1111 1244444444432 122444
Q ss_pred HHHHHHHHHHHHHHHHHhcCCeEeecC-CeeEEEEecC---CcHHHhh------ceee-cc----cCCEEEEEEcCCCCH
Q 011842 369 EVQKCLRNAHYLKDRLLDAGISAMLNE-LSSTVVFERP---QDEEFVR------RWQL-AC----QGNIAHVVVMPNVTI 433 (476)
Q Consensus 369 ~~~~~~~~a~~l~~~L~~~g~~~~~~~-~~~iv~f~~~---~~~~~~~------~~~l-~~----~~~~lRv~~~~~~T~ 433 (476)
..+...++++.+.+.|++.+......| .++..++..+ +..++.+ +..+ +. ..+.+|+++. .++
T Consensus 277 ~~~~~~~~~~~l~~~l~~~~~~~~~~p~gg~~~~i~~~~~~~~~~~~~~ll~~~gv~v~pg~~F~~~~~iRis~~--~~~ 354 (373)
T PRK07324 277 NRKIVRTNLAILDEWVAKEPRVSYVKPKAVSTSFVKLDVDMPSEDFCLKLLKETGVLLVPGNRFDLEGHVRIGYC--CDT 354 (373)
T ss_pred HHHHHHHHHHHHHHHHhcCCCceEECCCceEEEEEEeCCCCCHHHHHHHHHHhcCEEEECccccCCCCeEEEEec--CCH
Confidence 555566677888888887643333334 3333333332 2233332 2222 21 1368999886 357
Q ss_pred HHHHHHHHHHHHHHHH
Q 011842 434 DKLDDFLNELIENRST 449 (476)
Q Consensus 434 edid~~~~~l~~~~~~ 449 (476)
+.++..++.|.+..++
T Consensus 355 ~~l~~~l~rl~~~l~~ 370 (373)
T PRK07324 355 ETLKKGLKKLSEFLRE 370 (373)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 8888888888776653
No 91
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.90 E-value=2.1e-21 Score=187.66 Aligned_cols=288 Identities=14% Similarity=0.137 Sum_probs=209.7
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCc
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGE 218 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~ 218 (476)
.....+.+.+++|.+-+. ..+.++...||-..+...-...|+.+|+.++-.|.|+...+|-.++.-..+.++
T Consensus 216 ~~hv~LE~eLA~LHqK~a----ALlFsSCfVANDstLftLak~lpgcei~SD~gNHASMI~GIrns~v~K~IFrHN---- 287 (570)
T KOG1360|consen 216 KHHVRLEAELADLHQKEA----ALLFSSCFVANDSTLFTLAKKLPGCEIFSDEGNHASMIQGIRNSRVPKHIFRHN---- 287 (570)
T ss_pred chhhhHHHHHHHHhcCcc----eeeeeeeeeccchHHHHHHHHCCCcEEeccccchHHHHHHhhhcCCcceeeccC----
Confidence 455555666888877664 566667777877776666566799999999999999999999999988888888
Q ss_pred cCHHHHHHHHHcC-CCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccc-cccccCCCCCCcc
Q 011842 219 IDCADFKAKLLQN-KDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMM-PFVKKAPKVSFKK 296 (476)
Q Consensus 219 ~D~~~Le~~l~~~-~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~-~~~~~~~~~~~~~ 296 (476)
|+++|+++|+.. ...|.+|.+....+|+|++-||+||++++++||+ +..+|++|+.+.+ |-..+...-++..
T Consensus 288 -D~~hL~~lL~~~~~svPKivAFEtVhSM~GavcpleelcDvah~yGA-----iTFlDEVHAVGlYG~rGaGvgerdGvm 361 (570)
T KOG1360|consen 288 -DLDHLEQLLQSSPKSVPKIVAFETVHSMDGAVCPLEELCDVAHKYGA-----ITFLDEVHAVGLYGPRGAGVGERDGVM 361 (570)
T ss_pred -CHHHHHHHHHhCCCCCCceEEEeeeeccCCCcCCHHHHHHHHHHhCc-----eeeeehhhhhccccCCCCCccccCCcc
Confidence 999999999875 5578899999999999999999999999999999 9999999985544 4333433345543
Q ss_pred -cccEEEEcCCCCCCCCCCceeEEeehhhhhhhc-CCccccCCCCCcccCCCCChhHHHHHHHHHHhC-hhcHHHHHHHH
Q 011842 297 -PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLS-SNVEYLASRDATIMGSRNGHAPIFLWYTLNRKG-YKGFQKEVQKC 373 (476)
Q Consensus 297 -~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~-~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g-~~g~~~~~~~~ 373 (476)
.+|+|+.+..|.+|+ -.|++.....+++.+. ..+-|++... -+..-......+.+.+. .+| +...+..
T Consensus 362 ~kvDiIsGTLgKafGc--VGGYIAat~~LvDmiRSyAaGFIFTTS------LPP~vl~GAleaVr~lk~~eg-~~lR~~h 432 (570)
T KOG1360|consen 362 HKVDIISGTLGKAFGC--VGGYIAATRKLVDMIRSYAAGFIFTTS------LPPMVLAGALEAVRILKSEEG-RVLRRQH 432 (570)
T ss_pred hhhhhcccchhhhccc--ccceehhhhhHHHHHHHhcCceEEecC------CChHHHHhHHHHHHHHhhhhh-HHHHHHH
Confidence 499999999999885 2456666666766552 2334444322 11111112223333332 233 4455666
Q ss_pred HHHHHHHHHHHHhcCCeEeecCCeeEEEEecCCc-------HHHhhcee----------ecccCCEEEEEEcCCCCHHHH
Q 011842 374 LRNAHYLKDRLLDAGISAMLNELSSTVVFERPQD-------EEFVRRWQ----------LACQGNIAHVVVMPNVTIDKL 436 (476)
Q Consensus 374 ~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~~-------~~~~~~~~----------l~~~~~~lRv~~~~~~T~edi 436 (476)
+++.+|+++.|.+.|+.++. -.+.|+..++.+. +.++.+.+ ++.+...+|+..+|++|++.+
T Consensus 433 qrnv~~~kq~l~~~GiPVi~-~pSHIiPv~vgda~l~~~~sd~Li~~h~iYvQaINyPTV~rG~E~LRiaPTP~HT~~mm 511 (570)
T KOG1360|consen 433 QRNVKYVKQLLMELGIPVIP-NPSHIIPVRVGDAALAKQASDILISKHNIYVQAINYPTVARGTERLRIAPTPHHTPQMM 511 (570)
T ss_pred HHHHHHHHHHHHHcCCcccC-CCcceeeeeccCHHHHHHHHHHHHHhcCeEEEeccCCcccccceeeecCCCCCCCHHHH
Confidence 77899999999999987654 4466777777653 23333332 233457899999999999999
Q ss_pred HHHHHHHHHHHHHH
Q 011842 437 DDFLNELIENRSTW 450 (476)
Q Consensus 437 d~~~~~l~~~~~~~ 450 (476)
+.|+++|..+.++.
T Consensus 512 ~~lv~~l~~vw~~v 525 (570)
T KOG1360|consen 512 NILVNALLDVWNEV 525 (570)
T ss_pred HHHHHHHHHHHHHc
Confidence 99999999887765
No 92
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.90 E-value=6.5e-21 Score=207.13 Aligned_cols=303 Identities=15% Similarity=0.166 Sum_probs=213.4
Q ss_pred hhhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhh------CCCcEEEecCCCchHHHHHHHHcCCeE
Q 011842 135 VHSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREV------FPDGILYASRESHYSVFKAARMYRMEC 208 (476)
Q Consensus 135 ~~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~------~p~~~Vl~s~~~H~S~~~~~~~~G~~v 208 (476)
.+.-++-.++.+++++++|++.. .+.-.+|+++++.++++.|.+ ..+.+|+++...|.+....+...|+++
T Consensus 539 QG~lq~i~elq~~l~eLtGmd~~---Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNpasa~~~GieV 615 (954)
T PRK12566 539 EGYRAMIDELEAWLCAITGFDAI---CMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNPASAQMAGMRV 615 (954)
T ss_pred cCHHHHHHHHHHHHHHHHCCCeE---eecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCHHHHHHCCCEE
Confidence 36677888888999999999852 344458889998888887652 135689999999977777788899999
Q ss_pred EEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCccccccccccc
Q 011842 209 VKVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKK 288 (476)
Q Consensus 209 ~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~ 288 (476)
+.||++++|.+|+++|++++++...+...|.++++++..+..+|+++|+++++++|+ ++++|+|+.........
T Consensus 616 v~Vp~D~~G~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Ga-----lv~vDgA~~~a~~~l~~- 689 (954)
T PRK12566 616 VIVECDPDGNVDLDDLKAKAAAAGDRLSCLMITYPSTHGVYEEGIREICEVVHQHGG-----QVYMDGANLNAQVGLAR- 689 (954)
T ss_pred EEeccCCCCCcCHHHHHHHhhccCCCEEEEEEEecCcCceecchHHHHHHHHHHcCC-----EEEEEeeChhhccCCCC-
Confidence 999999899999999999998544455678888998887777889999999999999 99999998643332111
Q ss_pred CCCCCCcccccEEEEcCCCCCCCCCCceeEEeeh-hhhh----hhcCCccc-cCCC---CCc--ccCCCCChhHHHHHHH
Q 011842 289 APKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRM-EHIN----VLSSNVEY-LASR---DAT--IMGSRNGHAPIFLWYT 357 (476)
Q Consensus 289 ~~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~-~~~~----~l~~~~~y-l~~~---~~~--~~~sr~~~~~l~~~~~ 357 (476)
....++|++++++|||++.|.+.|..++.. ...+ .+...+.. ..+. ..+ -.++-++...+..|..
T Consensus 690 ----Pg~~GADi~~~s~HKtf~~P~G~GGP~vG~iav~~~L~pfLp~~P~~d~~G~~~r~ga~S~~~~gsa~~l~~A~~Y 765 (954)
T PRK12566 690 ----PADIGADVSHMNLHKTFCIPHGGGGPGMGPIGVRAHLAPFVANHPVVPVEGPDPNNGAVSAAPWGSASILPISWMY 765 (954)
T ss_pred ----hhhcCCCEEEecCCcccCcCccCCCCccchhhhhhhhhhhccCCCCcCCCCCCCCCCceeecccchHHHHHHHHHH
Confidence 122349999999999999999988887765 2222 11211100 0000 000 1111111224567777
Q ss_pred HHHhChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecC---C---eeEEEEe-cCC----c-HHHhh-----ceeec---
Q 011842 358 LNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNE---L---SSTVVFE-RPQ----D-EEFVR-----RWQLA--- 417 (476)
Q Consensus 358 l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~---~---~~iv~f~-~~~----~-~~~~~-----~~~l~--- 417 (476)
++.+|.+ +.+.....+.+++|+.++|.+ ++.....+ . ..++.++ .++ + .++.+ ++..+
T Consensus 766 i~~lG~e-Lk~aa~~ailnAnYla~rL~~-~~~v~~~~~~~~~~hEfii~~~~l~~~~g~~~~dvakRL~d~Gihapt~~ 843 (954)
T PRK12566 766 IAMMGPQ-LADASEVAILSANYLANQLGG-AFPVLYRGRNERVAHECILDLRPLKAQTGISEEDVAKRLMDYGFHAPTMS 843 (954)
T ss_pred HHHHCHH-HHHHHHHHHHHHHHHHHHhHh-hCCCCcCCCCCCeeeEEEEEccccccccCCCHHHHHHHHHHCCcEEeEEe
Confidence 8888988 888888889999999999987 33333222 1 1222222 221 1 22322 22222
Q ss_pred -ccCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHh
Q 011842 418 -CQGNIAHVVVMPNVTIDKLDDFLNELIENRSTWYE 452 (476)
Q Consensus 418 -~~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~~ 452 (476)
...+.+|++.+...|++|||+|+++|+++.+++.+
T Consensus 844 fPv~~~LmIepTE~eskeEIDrf~eAL~~I~~e~~~ 879 (954)
T PRK12566 844 FPVPGTLMVEPTESESKAELDRFVEAMLSIRAEIGK 879 (954)
T ss_pred eccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHHH
Confidence 23678999999999999999999999999988754
No 93
>PLN02656 tyrosine transaminase
Probab=99.90 E-value=6.2e-21 Score=197.25 Aligned_cols=291 Identities=15% Similarity=0.033 Sum_probs=200.6
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCC
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLI 215 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~ 215 (476)
+..++++++.+++.+..|...++..+++|+|+++|+..++.+... ||+.|++++++|..+...++..|++++.+++++
T Consensus 74 G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~--~gd~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~ 151 (409)
T PLN02656 74 GLPQARRAIAEYLSRDLPYKLSLDDVFITSGCTQAIDVALSMLAR--PGANILLPRPGFPIYELCAAFRHLEVRYVDLLP 151 (409)
T ss_pred CCHHHHHHHHHHHHHhcCCCCCcccEEEeCChHHHHHHHHHHHhC--CCCeEEEeCCCCCcHHHHHHHcCCEEEEEeCCC
Confidence 345899999999988777654445699999999999988887765 999999999999988888899999999999853
Q ss_pred --CCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccc---cCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCC
Q 011842 216 --SGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAV---DDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAP 290 (476)
Q Consensus 216 --~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~i---d~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~ 290 (476)
++.+|+++|++++.++++ ++++++++|+||.+ +++++|+++|++||+ ||++|++|+.+.+......+
T Consensus 152 ~~~~~~d~~~l~~~~~~~~~---~v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~-----~ii~De~y~~~~~~~~~~~~ 223 (409)
T PLN02656 152 EKGWEVDLDAVEALADQNTV---ALVIINPGNPCGNVYSYQHLKKIAETAEKLKI-----LVIADEVYGHLAFGSNPFVP 223 (409)
T ss_pred cCCCCCCHHHHHHHhccCce---EEEEECCCCCCCCCCCHHHHHHHHHHHHHcCC-----EEEEehhhhhcccCCCCccc
Confidence 357999999998876554 77788899999999 579999999999999 99999999876553222111
Q ss_pred CCCCccc-ccEEEEcCCCC-CCCCCCceeEEeeh--------hhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHH
Q 011842 291 KVSFKKP-IGSVSVSGHKF-VGCPMPCGVQITRM--------EHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNR 360 (476)
Q Consensus 291 ~~~~~~~-~Dsi~~s~hK~-l~~p~~~G~l~~~~--------~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~ 360 (476)
...+... --++..|+.|. +.+++++|+++.++ ++++.+....... .+. ..+.++++...
T Consensus 224 ~~~~~~~~~vi~~~SfSK~f~~pGlRiG~~i~~~~~~~~~~~~~~~~~~~~~~~~--------~~~---s~~~q~a~~~~ 292 (409)
T PLN02656 224 MGVFGSIVPVLTLGSLSKRWIVPGWRLGWFVTTDPSGSFRDPKIVERIKKYFDIL--------GGP---ATFIQAAVPTI 292 (409)
T ss_pred HHHhcccCcEEEEcccchhccCcceeEEEEEEeCcccccccHHHHHHHHHHHhhh--------cCC---CHHHHHHHHHH
Confidence 1111111 12455677885 88899999999852 3444442211111 111 13444444444
Q ss_pred hC---hhcHHHHHHHHHHHHHHHHHHHHhcCCeE-eecC-CeeEEEEecC--------CcHHHh------hceee-cc--
Q 011842 361 KG---YKGFQKEVQKCLRNAHYLKDRLLDAGISA-MLNE-LSSTVVFERP--------QDEEFV------RRWQL-AC-- 418 (476)
Q Consensus 361 ~g---~~g~~~~~~~~~~~a~~l~~~L~~~g~~~-~~~~-~~~iv~f~~~--------~~~~~~------~~~~l-~~-- 418 (476)
+. ...+++..++..++++++.+.|++.+... ...| .+..+.++.+ ++.++. ++..+ +.
T Consensus 293 l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~ 372 (409)
T PLN02656 293 LEQTDESFFKKTINILKQSSDICCDRIKEIPCITCPHKPEGSMAVMVKLNLSLLEDISDDIDFCFKLAREESVIILPGTA 372 (409)
T ss_pred HhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCcCCCeEEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEecchh
Confidence 42 23467777888888999999998875432 2234 3444554443 122222 12222 21
Q ss_pred --cCCEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Q 011842 419 --QGNIAHVVVMPNVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 419 --~~~~lRv~~~~~~T~edid~~~~~l~~~~~~ 449 (476)
..+++|+++.. +.++++..+..|+++...
T Consensus 373 fg~~~~iRi~~~~--~~e~l~eal~rl~~~~~~ 403 (409)
T PLN02656 373 VGLKNWLRITFAA--DPSSLEEALGRIKSFYLR 403 (409)
T ss_pred cCCCCeEEEEeCC--CHHHHHHHHHHHHHHHHH
Confidence 23689999984 688888888888776654
No 94
>PRK12414 putative aminotransferase; Provisional
Probab=99.90 E-value=3.5e-21 Score=197.49 Aligned_cols=287 Identities=12% Similarity=0.058 Sum_probs=200.4
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCc-ccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCC
Q 011842 136 HSRQFEVGVLDWFARLWELENNE-YWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCL 214 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~-~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~ 214 (476)
+..++++++++++++++|++.+. ..+++|+|+++++..++++... ||+.|++++++|..+...++..|++++.+|.+
T Consensus 67 G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~al~~~~~~l~~--~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~ 144 (384)
T PRK12414 67 GIAALREALAEKTERLYGARYDPASEVTVIASASEGLYAAISALVH--PGDEVIYFEPSFDSYAPIVRLQGATPVAIKLS 144 (384)
T ss_pred CcHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHHHHHHHHHhcC--CCCEEEEeCCCccchHHHHHHcCCEEEEEecC
Confidence 56799999999999999986322 3599999999999988887765 99999999999999999999999999999987
Q ss_pred C-CCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccc---cCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCC
Q 011842 215 I-SGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAV---DDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAP 290 (476)
Q Consensus 215 ~-~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~i---d~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~ 290 (476)
. ++.+|++.|++++.+++ .+|++++++|+||.+ +++++|+++|++||+ ++++|++|+-+.+......+
T Consensus 145 ~~~~~~d~~~l~~~l~~~~---~~v~i~~p~NPTG~~~s~~~~~~i~~~a~~~~~-----~ii~De~Y~~~~~~~~~~~~ 216 (384)
T PRK12414 145 PEDFRVNWDEVAAAITPRT---RMIIVNTPHNPSATVFSAADLARLAQLTRNTDI-----VILSDEVYEHVVFDGARHHS 216 (384)
T ss_pred ccccccCHHHHHhhcCccc---EEEEEcCCCCCCCcCCCHHHHHHHHHHHHHCCe-----EEEEhhhhhhccCCCCCccC
Confidence 4 56799999999986544 377788999999997 568999999999999 99999999865543211111
Q ss_pred CCCCc--ccccEEEEcCCCCCC-CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhCh-hcH
Q 011842 291 KVSFK--KPIGSVSVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGY-KGF 366 (476)
Q Consensus 291 ~~~~~--~~~Dsi~~s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~-~g~ 366 (476)
..... ..-.++..|++|.++ .++++|++++++++++.+.....+. .+..+ .+.++++...+.. ..+
T Consensus 217 ~~~~~~~~~~~i~~~SfSK~~~~pGlRiG~~v~~~~l~~~l~~~~~~~-----~~~~s-----~~~q~a~~~~l~~~~~~ 286 (384)
T PRK12414 217 MARHRELAERSVIVSSFGKSYHVTGWRVGYCLAPAELMDEIRKVHQFM-----VFSAD-----TPMQHAFAEALAEPASY 286 (384)
T ss_pred cccCcCccCcEEEEecccccccCccceEEEEecCHHHHHHHHHHHhhe-----ecCCC-----cHHHHHHHHHhcCChHH
Confidence 11111 112367788999884 8899999999988766553322221 01111 2344444444422 223
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEE-ecCC-----cHHHh------hceee-cc--------cCCEEEE
Q 011842 367 QKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVF-ERPQ-----DEEFV------RRWQL-AC--------QGNIAHV 425 (476)
Q Consensus 367 ~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f-~~~~-----~~~~~------~~~~l-~~--------~~~~lRv 425 (476)
.+..+.+.++++++.+.|++.|+. +.++..+.+.| +.+. +.++. ++..+ +. ..+++|+
T Consensus 287 ~~~~~~~~~~r~~l~~~L~~~g~~-~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRi 365 (384)
T PRK12414 287 LGLGAFYQRKRDLLARELAGSRFE-LLPSEGSFFMLARFRHFSDESDSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRL 365 (384)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCe-ecCCCcceEEEEcccccCCCCHHHHHHHHHHhCCEEEecchhhcCCCCCCCEEEE
Confidence 455667778889999999998754 34454444444 4321 22222 12222 11 1368999
Q ss_pred EEcCCCCHHHHHHHHHHHHH
Q 011842 426 VVMPNVTIDKLDDFLNELIE 445 (476)
Q Consensus 426 ~~~~~~T~edid~~~~~l~~ 445 (476)
++.. ++++++..++.|.+
T Consensus 366 s~~~--~~~~~~~~~~rl~~ 383 (384)
T PRK12414 366 SFSK--DDATLVEGARRLCS 383 (384)
T ss_pred EecC--CHHHHHHHHHHHhh
Confidence 9884 57888877777653
No 95
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.90 E-value=9.6e-21 Score=194.38 Aligned_cols=326 Identities=13% Similarity=0.096 Sum_probs=210.7
Q ss_pred hcccccccCCCCcCCcchHHHHHHHHHhhCCCCCCcccCccchhhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHH
Q 011842 93 MERTKHHLGYPYNLDFDYGALAQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNL 172 (476)
Q Consensus 93 ~~~~~~~~g~p~~~~~~~~~l~~~l~~~~n~~g~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~ 172 (476)
+..+++|+|..............+..++.+..+....+++ .....++.+.+++++|.+. .+++++|+.++.
T Consensus 2 ~f~s~dyLgl~~~~~~~~~~~~a~~~~g~~~~~sr~~yg~-----~~~~~~LE~~lA~~~g~e~----al~~~sG~~a~~ 72 (392)
T PLN03227 2 NFATHDFLSTSSSPTLRQTALESLSHYGCGSCGPRGFYGT-----IDAHLELEQCMAEFLGTES----AILYSDGASTTS 72 (392)
T ss_pred CCcCcCccCCCCCHHHHHHHHHHHHHhCCCCcccccccCC-----hHHHHHHHHHHHHHhCCCc----EEEecCcHHHHH
Confidence 4566778884443322212222233444444444333332 2356677777888898863 788889999998
Q ss_pred HHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccCHHHHHHHHHc---C--------CCCcEEEEEe
Q 011842 173 HGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCADFKAKLLQ---N--------KDKPAIINVN 241 (476)
Q Consensus 173 ~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~~~Le~~l~~---~--------~~~p~~vv~t 241 (476)
.++.+... |+|.|++++..|.|+...+++.+++++.++++ |++++++.++. . +.++.+|++.
T Consensus 73 ~~i~~l~~--~GD~Vl~~~~~h~s~~~~~~l~~~~~~~~~~~-----d~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E 145 (392)
T PLN03227 73 STVAAFAK--RGDLLVVDRGVNEALLVGVSLSRANVRWFRHN-----DMKDLRRVLEQVRAQDVALKRKPTDQRRFLVVE 145 (392)
T ss_pred HHHHHhCC--CCCEEEEeccccHHHHHHHHHcCCeEEEeCCC-----CHHHHHHHHHHhhhhccccccccCCCcEEEEEc
Confidence 88777654 99999999999999999988889988888875 55555554422 1 1234578888
Q ss_pred eCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccc-cccccC-CCCCC--cccccEEEEcCCCCCCCCCCcee
Q 011842 242 IGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMM-PFVKKA-PKVSF--KKPIGSVSVSGHKFVGCPMPCGV 317 (476)
Q Consensus 242 ~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~-~~~~~~-~~~~~--~~~~Dsi~~s~hK~l~~p~~~G~ 317 (476)
..++++|.+.|+++|.++|++||+ ++++|++|+.+.. ...+.. ..+.. ...+|+++.+.+|+++ +..|+
T Consensus 146 ~v~~~~G~i~~l~~i~~l~~~~g~-----~livDe~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~g--~~gg~ 218 (392)
T PLN03227 146 GLYKNTGTLAPLKELVALKEEFHY-----RLILDESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAFG--SVGGM 218 (392)
T ss_pred CCcCCCCcccCHHHHHHHHHHcCC-----EEEEECcccccccCCCCCcHHHHcCCCCCCCceEEEeechhhhh--ccCcE
Confidence 889999999999999999999999 9999999973322 111111 00111 2247999999999876 44577
Q ss_pred EEeehhhhhhhcC-CccccCCCCCcccCCCCChhHHHHHHHHHHh-ChhcHHHHHHHHHHHHHHHHHHHHhcCCeE----
Q 011842 318 QITRMEHINVLSS-NVEYLASRDATIMGSRNGHAPIFLWYTLNRK-GYKGFQKEVQKCLRNAHYLKDRLLDAGISA---- 391 (476)
Q Consensus 318 l~~~~~~~~~l~~-~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~-g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~---- 391 (476)
++.+.+.++.+.. ...+ ++.++- .++.+|+++..+ .....++++++..+++++|+++|++.++..
T Consensus 219 v~~~~~~~~~~~~~~~~~------~~~~~~---~p~~~~aa~~al~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~ 289 (392)
T PLN03227 219 TVGSEEVVDHQRLSGSGY------CFSASA---PPFLAKADATATAGELAGPQLLNRLHDSIANLYSTLTNSSHPYALKL 289 (392)
T ss_pred EecCHHHHHHHHHhCcCc------cccCCC---CHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCcccccc
Confidence 7777776544321 1111 222221 133444444333 112235678889999999999998754321
Q ss_pred ------eecCCeeEEEEecCCcH------------HH-----hhceeecc-c-----------CCEEEEEEcCCCCHHHH
Q 011842 392 ------MLNELSSTVVFERPQDE------------EF-----VRRWQLAC-Q-----------GNIAHVVVMPNVTIDKL 436 (476)
Q Consensus 392 ------~~~~~~~iv~f~~~~~~------------~~-----~~~~~l~~-~-----------~~~lRv~~~~~~T~edi 436 (476)
.....++++.+...+.. .+ .+++.+.. . ...+|++++..+|+|||
T Consensus 290 rg~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~~~~~~~~P~~~iR~~~~~~~t~eei 369 (392)
T PLN03227 290 RNRLVITSDPISPIIYLRLSDQEATRRTDETLILDQIAHHSLSEGVAVVSTGGHVKKFLQLVPPPCLRVVANASHTREDI 369 (392)
T ss_pred ccccccCCCCCCCEEEEEeCCHHHhhhhhhhhHHHHHHHHHHHCCCEEEecccccCCcCCCCCCceEEEEecCCCCHHHH
Confidence 11234667777654310 22 12333311 0 35689999999999999
Q ss_pred HHHHHHHHHHHHHH
Q 011842 437 DDFLNELIENRSTW 450 (476)
Q Consensus 437 d~~~~~l~~~~~~~ 450 (476)
|+++++|+++.+.+
T Consensus 370 ~~~~~~l~~~~~~~ 383 (392)
T PLN03227 370 DKLLTVLGEAVEAI 383 (392)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998775
No 96
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.90 E-value=1.2e-20 Score=193.19 Aligned_cols=281 Identities=12% Similarity=0.094 Sum_probs=194.0
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCc
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGE 218 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~ 218 (476)
.+..++++++++++|.+ ..+++++|+++++.++.+... |++.|+++++.|.++..++++.|++++.++..
T Consensus 84 ~~~~~l~~~la~~~~~~----~~i~~~~g~~~~~~~l~~~~~--~gd~V~~~~~~~~~~~~~~~~~g~~~~~~~~~---- 153 (385)
T PRK05958 84 PAHEALEEELAEWFGAE----RALLFSSGYAANLAVLTALAG--KGDLIVSDKLNHASLIDGARLSRARVRRYPHN---- 153 (385)
T ss_pred HHHHHHHHHHHHHhCCC----cEEEECcHHHHHHHHHHHhCC--CCCEEEEeCccCHHHHHHHHhcCCceEEeCCC----
Confidence 56677888888888853 267777888998877766544 89999999999999999999999999888764
Q ss_pred cCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCccccccc-cccc-CCCCCCcc
Q 011842 219 IDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMP-FVKK-APKVSFKK 296 (476)
Q Consensus 219 ~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~-~~~~-~~~~~~~~ 296 (476)
|++.+++.+++..+...+++++...+++|.+.|+++|+++|++||+ |+++|++|+.+.+. .... ........
T Consensus 154 -d~~~l~~~i~~~~~~~~lvi~~~~~~~~G~~~~l~~i~~ia~~~~~-----~li~De~~~~g~~~~~g~~~~~~~~~~~ 227 (385)
T PRK05958 154 -DVDALEALLAKWRAGRALIVTESVFSMDGDLAPLAELVALARRHGA-----WLLVDEAHGTGVLGPQGRGLAAEAGLAG 227 (385)
T ss_pred -CHHHHHHHHHhccCCCeEEEEEecccCCCCcCCHHHHHHHHHHhCC-----EEEEECcccccccCCCCCchHHhhCCCC
Confidence 8999999997642234566676778899999999999999999999 99999999755432 1111 10011112
Q ss_pred c-ccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCC-ccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHH
Q 011842 297 P-IGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSN-VEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCL 374 (476)
Q Consensus 297 ~-~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~-~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~ 374 (476)
. .+++..++||+++. .+ |+++.++++.+.+... ..|.. .++.+.......+++++.+.. . .+..+++.
T Consensus 228 ~~~~i~~~s~sK~~~~-~G-g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~aa~~aal~~~~~-~-~~~~~~~~ 297 (385)
T PRK05958 228 EPDVILVGTLGKALGS-SG-AAVLGSETLIDYLINRARPFIF------TTALPPAQAAAARAALRILRR-E-PERRERLA 297 (385)
T ss_pred CCceEEEEechhhccc-CC-cEEEcCHHHHHHHHHhCcccee------cCCCCHHHHHHHHHHHHHHhc-C-HHHHHHHH
Confidence 2 34677889999974 34 7887777665544211 12211 111211222234445554422 2 56778889
Q ss_pred HHHHHHHHHHHhcCCeEeecCCeeEEEEecCCc---HHHh-----hceeecc--------cCCEEEEEEcCCCCHHHHHH
Q 011842 375 RNAHYLKDRLLDAGISAMLNELSSTVVFERPQD---EEFV-----RRWQLAC--------QGNIAHVVVMPNVTIDKLDD 438 (476)
Q Consensus 375 ~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~~---~~~~-----~~~~l~~--------~~~~lRv~~~~~~T~edid~ 438 (476)
++++++.+.|++.++. +.++.++++.|..+.. .++. ++..+.. ..+.+|++++..+|++++++
T Consensus 298 ~~~~~l~~~L~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~v~~~~~~~~~~~~~~lRis~~~~~~~~~i~~ 376 (385)
T PRK05958 298 ALIARLRAGLRALGFQ-LMDSQSAIQPLIVGDNERALALAAALQEQGFWVGAIRPPTVPAGTSRLRITLTAAHTEADIDR 376 (385)
T ss_pred HHHHHHHHHHHHcCCC-cCCCCCCEEEEEeCCHHHHHHHHHHHHHCCceEecccCCCCCCCCceEEEEecCCCCHHHHHH
Confidence 9999999999988764 3445566777766531 2232 2223321 13689999999999999999
Q ss_pred HHHHHHHH
Q 011842 439 FLNELIEN 446 (476)
Q Consensus 439 ~~~~l~~~ 446 (476)
+++.|+++
T Consensus 377 ~l~~l~~~ 384 (385)
T PRK05958 377 LLEALAEA 384 (385)
T ss_pred HHHHHHhc
Confidence 99999765
No 97
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.90 E-value=8.4e-21 Score=195.22 Aligned_cols=291 Identities=11% Similarity=0.042 Sum_probs=204.1
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCC
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLI 215 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~ 215 (476)
+..++++++.+++.+..|...+...+++|+|+++|+..++.+... +++.|+++++.|..+..+++.+|++++.+++++
T Consensus 69 g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~~~--~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~ 146 (393)
T PRK05764 69 GIPELREAIAAKLKRDNGLDYDPSQVIVTTGAKQALYNAFMALLD--PGDEVIIPAPYWVSYPEMVKLAGGVPVFVPTGE 146 (393)
T ss_pred ChHHHHHHHHHHHHHHhCCCCCHHHEEEeCCcHHHHHHHHHHhcC--CCCEEEecCCCCcchHHHHHHcCCEEEEEecCc
Confidence 567899999999988877644445699999999999988887755 899999999999999999999999999999874
Q ss_pred --CCccCHHHHHHHHHcCCCCcEEEEEeeCCCcccccc---CHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCC
Q 011842 216 --SGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVD---DLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAP 290 (476)
Q Consensus 216 --~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id---~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~ 290 (476)
++.+|++.|++++.+.++ +|++++++|++|.+- ++++|+++|++||+ |+++|++|+.+.+......+
T Consensus 147 ~~~~~~d~~~l~~~l~~~~~---~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~-----~ii~De~y~~~~~~~~~~~~ 218 (393)
T PRK05764 147 ENGFKLTVEQLEAAITPKTK---ALILNSPSNPTGAVYSPEELEAIADVAVEHDI-----WVLSDEIYEKLVYDGAEFTS 218 (393)
T ss_pred ccCCcCCHHHHHHhhCccce---EEEEECCCCCCCcccCHHHHHHHHHHHHHCCc-----EEEEeccccceeeCCCCccc
Confidence 357899999999865543 777888999999984 58899999999999 99999999865542111111
Q ss_pred CCCC--c-ccccEEEEcCCCCCC-CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhC--hh
Q 011842 291 KVSF--K-KPIGSVSVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKG--YK 364 (476)
Q Consensus 291 ~~~~--~-~~~Dsi~~s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g--~~ 364 (476)
.... . ...+++..++.|.++ .++++|+++.++++++.+.....+. ... ...+.++++.+.+. ..
T Consensus 219 ~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~i~~~~~~~~~~~~~~~~~-------~~~---~~~~~q~~~~~~l~~~~~ 288 (393)
T PRK05764 219 IASLSPELRDRTITVNGFSKAYAMTGWRLGYAAGPKELIKAMSKLQSHS-------TSN---PTSIAQYAAVAALNGPQD 288 (393)
T ss_pred HHHcCCCCcCCEEEEecCcccccCccceeEEEecCHHHHHHHHHHHhhc-------ccC---CChHHHHHHHHHHcCChH
Confidence 1111 1 124567788899987 6778999998887766553211110 001 12345555555542 33
Q ss_pred cHHHHHHHHHHHHHHHHHHHHhc-CCeEeecCCe-eEEEEecCC--------cHHHh----h--ceeecc-----cCCEE
Q 011842 365 GFQKEVQKCLRNAHYLKDRLLDA-GISAMLNELS-STVVFERPQ--------DEEFV----R--RWQLAC-----QGNIA 423 (476)
Q Consensus 365 g~~~~~~~~~~~a~~l~~~L~~~-g~~~~~~~~~-~iv~f~~~~--------~~~~~----~--~~~l~~-----~~~~l 423 (476)
.+++..++..++++++.+.|++. |+.. .++.. ..+.+..+. +.++. + ++.+.. ..+++
T Consensus 289 ~~~~~~~~~~~~~~~l~~~L~~~~g~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~v 367 (393)
T PRK05764 289 EVEEMRQAFEERRDLMVDGLNEIPGLEC-PKPEGAFYVFPNVSKLLGKSITDSLEFAEALLEEAGVAVVPGIAFGAPGYV 367 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCCcc-cCCCcceEEEEecccccccccCCHHHHHHHHHHhCCEEEccccccCCCCEE
Confidence 45566777778888999999987 6543 33443 344333332 12322 2 233321 14789
Q ss_pred EEEEcCCCCHHHHHHHHHHHHHHHHH
Q 011842 424 HVVVMPNVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 424 Rv~~~~~~T~edid~~~~~l~~~~~~ 449 (476)
|+++. .++++++..++.|.+..++
T Consensus 368 Ris~~--~~~~~~~~~i~~l~~~~~~ 391 (393)
T PRK05764 368 RLSYA--TSLEDLEEGLERIERFLES 391 (393)
T ss_pred EEEec--CCHHHHHHHHHHHHHHHHh
Confidence 99876 4799999999999887653
No 98
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.89 E-value=1.1e-20 Score=195.45 Aligned_cols=288 Identities=14% Similarity=0.112 Sum_probs=186.7
Q ss_pred hHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchH-HHHHHHH--cCCeE--EEE
Q 011842 137 SRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYS-VFKAARM--YRMEC--VKV 211 (476)
Q Consensus 137 ~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S-~~~~~~~--~G~~v--~~v 211 (476)
..++|+.+.+.+++++|.+. ..+++++|+.||+.++.+... ||+.|+++...|.+ +...++. .+... +.+
T Consensus 72 ~~~lE~~~~~~la~l~g~~~---alv~~~SG~~A~~~~l~al~~--~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 146 (416)
T PRK13034 72 VDEVEALAIERAKQLFGCDY---ANVQPHSGSQANGAVYLALLK--PGDTILGMSLSHGGHLTHGAKVSLSGKWYNAVQY 146 (416)
T ss_pred HHHHHHHHHHHHHHHhCCCc---eEEecCCcHHHHHHHHHHhcC--CCCEEEEcCccceeeeecCCcceeccceeeeEEc
Confidence 45666656669999999874 135578999999999888765 99999999999987 3333332 12222 345
Q ss_pred eCCC-CCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCC
Q 011842 212 DCLI-SGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAP 290 (476)
Q Consensus 212 ~~~~-~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~ 290 (476)
+++. ++.+|+++|++.+... +|.+|++. .+..|..-|+++|.++|++||+ ++++|+||+.+........
T Consensus 147 ~~~~~~~~~d~~~le~~l~~~--~~klVi~~--~~~~g~~~dl~~l~~la~~~g~-----~livD~Aha~G~~~~g~~~- 216 (416)
T PRK13034 147 GVDRLTGLIDYDEVEELAKEH--KPKLIIAG--FSAYPRELDFARFREIADEVGA-----LLMVDMAHIAGLVAAGEHP- 216 (416)
T ss_pred ccccccCCcCHHHHHHHHhhc--CCeEEEEC--CCccccccCHHHHHHHHHHcCC-----EEEEeCcccccCcccCCCC-
Confidence 5542 4679999999998653 23466553 2446777899999999999999 9999999986655322211
Q ss_pred CCCCcccccEEEEcCCCCCCCCCCceeEEeehhhh-hhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHH
Q 011842 291 KVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHI-NVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKE 369 (476)
Q Consensus 291 ~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~-~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~ 369 (476)
... ..+|++++++|||+++|.| |+++++++.+ ..+.. +++. ++..+.......++..++...-..+..++
T Consensus 217 -~~~-~~~Di~~~s~~K~l~g~~G-G~v~~~~~~~~~~~~~---~~~~---~~~~~~~~~~~aa~~~al~~~~~~~~~~~ 287 (416)
T PRK13034 217 -NPF-PHAHVVTTTTHKTLRGPRG-GMILTNDEEIAKKINS---AVFP---GLQGGPLMHVIAAKAVAFGEALQPEFKTY 287 (416)
T ss_pred -CCC-CCceEEEEeCcccCCCCCC-eEEEECcHHHHHHHHh---hcCC---cccCCccHHHHHHHHHHHHHHhChhHHHH
Confidence 111 2489999999999987775 6666665433 22211 1111 11111111111222223332212334567
Q ss_pred HHHHHHHHHHHHHHHHhcCCeEeec-CCeeEEEEecCC---c-HHH---h--hceeecc-----------cCCEEEEEEc
Q 011842 370 VQKCLRNAHYLKDRLLDAGISAMLN-ELSSTVVFERPQ---D-EEF---V--RRWQLAC-----------QGNIAHVVVM 428 (476)
Q Consensus 370 ~~~~~~~a~~l~~~L~~~g~~~~~~-~~~~iv~f~~~~---~-~~~---~--~~~~l~~-----------~~~~lRv~~~ 428 (476)
.++.++++++|+++|++.|+..+.+ ..++++.+...+ . ..+ . +++.+.. ....+|++++
T Consensus 288 ~~~l~~~a~~l~~~L~~~G~~~~~~~~~t~i~~v~~~~~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~p~~~~~lR~~~~ 367 (416)
T PRK13034 288 AKQVIANAQALAEVLKERGYDLVSGGTDNHLLLVDLRPKGLSGKDAEQALERAGITVNKNTVPGDTESPFVTSGIRIGTP 367 (416)
T ss_pred HHHHHHHHHHHHHHHHHcCCEeccCCCCCcEEEEEcCCCCCCHHHHHHHHHhCCcEEeccCCCCCCcCCCCCCeeEeCcH
Confidence 8999999999999999998866532 346666655432 2 112 1 2333321 2357999988
Q ss_pred C----CCCHHHHHHHHHHHHHHHH
Q 011842 429 P----NVTIDKLDDFLNELIENRS 448 (476)
Q Consensus 429 ~----~~T~edid~~~~~l~~~~~ 448 (476)
. .+|++||++++++|.++..
T Consensus 368 ~~t~~~~~~~di~~l~~~l~~~~~ 391 (416)
T PRK13034 368 AGTTRGFGEAEFREIANWILDVLD 391 (416)
T ss_pred HHHhCCCCHHHHHHHHHHHHHHHh
Confidence 7 7789999999999998865
No 99
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.89 E-value=5.5e-21 Score=193.71 Aligned_cols=279 Identities=12% Similarity=0.077 Sum_probs=190.2
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCc
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGE 218 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~ 218 (476)
.+..++++.+++++|.+. .+++++|+++++.++.++.. |++.|+++++.|.++...+++.|++++.++.
T Consensus 61 ~~~~~l~~~la~~~~~~~----~i~~~~G~~~~~~~l~~~~~--~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~----- 129 (360)
T TIGR00858 61 PLHEELEEELAEWKGTEA----ALLFSSGYLANVGVISALVG--KGDLILSDALNHASLIDGCRLSGARVRRYRH----- 129 (360)
T ss_pred HHHHHHHHHHHHHhCCCC----EEEECchHHHHHHHHHHhCC--CCCEEEEEccccHHHHHHHHhcCCceEEecC-----
Confidence 455566677777777542 55556668888877666544 8999999999999999999999999988874
Q ss_pred cCHHHHHHHHHcCC-CCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCccccccccc-cc-CCCCCCc
Q 011842 219 IDCADFKAKLLQNK-DKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFV-KK-APKVSFK 295 (476)
Q Consensus 219 ~D~~~Le~~l~~~~-~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~-~~-~~~~~~~ 295 (476)
+|+++|++.+.+.+ .++.+|++.+..+++|.+.|+++|.++|++||+ ++++|++|+.+.++.. .. .......
T Consensus 130 ~d~~~l~~~~~~~~~~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~-----~li~De~~~~~~~~~~~~~~~~~~~~~ 204 (360)
T TIGR00858 130 NDVEHLERLLEKNRGERRKLIVTDGVFSMDGDIAPLPQLVALAERYGA-----WLMVDDAHGTGVLGEDGRGTLEHFGLK 204 (360)
T ss_pred CCHHHHHHHHHHcccCCCeEEEEeCCccCCCCCcCHHHHHHHHHHcCc-----EEEEECcccccCcCCCCCchHHhcCCC
Confidence 48999999997643 233567677778999999999999999999999 9999999975443211 10 1111222
Q ss_pred -ccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCC-ccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHH
Q 011842 296 -KPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSN-VEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKC 373 (476)
Q Consensus 296 -~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~-~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~ 373 (476)
...+++..+++|+++. .+ |+++.++++.+.+... ..+. ..++.+.....+..++++.+. ..++..++.
T Consensus 205 ~~~~~i~i~s~sK~~~~-~g-G~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~a~~~al~~~~--~~~~~~~~~ 274 (360)
T TIGR00858 205 PEPVDIQVGTLSKALGS-YG-AYVAGSQALIDYLINRARTLI------FSTALPPAVAAAALAALELIQ--EEPWRREKL 274 (360)
T ss_pred ccCCcEEEEechhhhhc-cC-cEEEcCHHHHHHHHHhCccce------ecCCCCHHHHHHHHHHHHHHh--hCHHHHHHH
Confidence 2368888999999984 33 8888887766554321 1111 111121121223334444332 235677889
Q ss_pred HHHHHHHHHHHHhcCCeEeecCCeeEEEEecCC---cHHHh-----hceeec--------ccCCEEEEEEcCCCCHHHHH
Q 011842 374 LRNAHYLKDRLLDAGISAMLNELSSTVVFERPQ---DEEFV-----RRWQLA--------CQGNIAHVVVMPNVTIDKLD 437 (476)
Q Consensus 374 ~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~---~~~~~-----~~~~l~--------~~~~~lRv~~~~~~T~edid 437 (476)
.++++++.+.|++.++. +.++.++++.+..+. ..++. +++.+. ...+.+|++++..+|++|++
T Consensus 275 ~~~~~~l~~~L~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~v~~~~~~~~~~~~~~iRis~~~~~~~~~i~ 353 (360)
T TIGR00858 275 LALIARLRAGLEALGFT-LMPSCTPIVPVIIGDNASALALAEELQQQGIFVGAIRPPTVPAGTSRLRLTLSAAHTPGDID 353 (360)
T ss_pred HHHHHHHHHHHHHcCCc-cCCCCCCEEEEEeCCHHHHHHHHHHHHHCCeeEeeeCCCCCCCCCceEEEEEcCCCCHHHHH
Confidence 99999999999998764 335556677666553 22232 233331 12358999999999999999
Q ss_pred HHHHHHH
Q 011842 438 DFLNELI 444 (476)
Q Consensus 438 ~~~~~l~ 444 (476)
+++++|+
T Consensus 354 ~~l~~l~ 360 (360)
T TIGR00858 354 RLAEALK 360 (360)
T ss_pred HHHHhhC
Confidence 9999873
No 100
>PRK08960 hypothetical protein; Provisional
Probab=99.89 E-value=1.2e-20 Score=193.64 Aligned_cols=287 Identities=12% Similarity=0.052 Sum_probs=196.9
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCC
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLI 215 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~ 215 (476)
+..++++.+.+++.+..|++.++.++++|+|+++|+..++.+... ||+.|++++++|.++...++..|.+++.+|++.
T Consensus 70 g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~~~~--~gd~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~ 147 (387)
T PRK08960 70 GLPALREAIAGFYAQRYGVDVDPERILVTPGGSGALLLASSLLVD--PGKHWLLADPGYPCNRHFLRLVEGAAQLVPVGP 147 (387)
T ss_pred CCHHHHHHHHHHHHHHhCCCCChhhEEEccCcHHHHHHHHHHhcC--CCCEEEEcCCCCcchHHHHHhcCCeEEEEecCc
Confidence 567899999999988878765556799999999999988877755 999999999999999999999999999999875
Q ss_pred C--CccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCcccccccccccCC
Q 011842 216 S--GEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAP 290 (476)
Q Consensus 216 ~--g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~ 290 (476)
+ +.+|++.|++.+.++++ ++++++++|+||.+-+ +++|+++|++||+ ++++|++|..+.+.. ...+
T Consensus 148 ~~~~~~d~~~l~~~~~~~~~---~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~-----~li~De~Y~~~~~~~-~~~~ 218 (387)
T PRK08960 148 DSRYQLTPALVERHWNADTV---GALVASPANPTGTLLSRDELAALSQALRARGG-----HLVVDEIYHGLTYGV-DAAS 218 (387)
T ss_pred ccCCCCCHHHHHHHhCccce---EEEEECCCCCCCcCcCHHHHHHHHHHHHHcCC-----EEEEEccccccccCC-CCCC
Confidence 4 47999999998876654 6778889999999876 5677778999999 999999997654421 1112
Q ss_pred CCCCcccccEEEEcCCCCCC-CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhC---hhcH
Q 011842 291 KVSFKKPIGSVSVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKG---YKGF 366 (476)
Q Consensus 291 ~~~~~~~~Dsi~~s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g---~~g~ 366 (476)
.....+ -.++..|++|.++ .++++|++++++++++.+.....+.. ...+ .+.+.++...+. ...+
T Consensus 219 ~~~~~~-~vi~~~S~SK~~g~~GlRiG~~~~~~~~~~~~~~~~~~~~-----~~~s-----~~~q~a~~~~l~~~~~~~l 287 (387)
T PRK08960 219 VLEVDD-DAFVLNSFSKYFGMTGWRLGWLVAPPAAVPELEKLAQNLY-----ISAS-----TPAQHAALACFEPETLAIL 287 (387)
T ss_pred hhhccC-CEEEEeecccccCCcccEEEEEEcCHHHHHHHHHHHhhhc-----cCCC-----HHHHHHHHHHhhcCcHHHH
Confidence 122211 2256678999884 88999999999887665532222110 1111 233333333331 2335
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCeEee-cCCeeEEEEecCC----cHHHh------hceeecc--------cCCEEEEEE
Q 011842 367 QKEVQKCLRNAHYLKDRLLDAGISAML-NELSSTVVFERPQ----DEEFV------RRWQLAC--------QGNIAHVVV 427 (476)
Q Consensus 367 ~~~~~~~~~~a~~l~~~L~~~g~~~~~-~~~~~iv~f~~~~----~~~~~------~~~~l~~--------~~~~lRv~~ 427 (476)
++..+...++++.+.+.|++.|+.... +...+.+.+..++ +.++. .+..+.. ..+++|+++
T Consensus 288 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~f~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~~ 367 (387)
T PRK08960 288 EARRAEFARRRDFLLPALRELGFGIAVEPQGAFYLYADISAFGGDAFAFCRHFLETEHVAFTPGLDFGRHQAGQHVRFAY 367 (387)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCcCCcCCCeeEEEEEeccccCCCHHHHHHHHHHhCCEEEcCchHhCCCCCCCeEEEEe
Confidence 556667777888899999988765433 3344555555432 22222 1333321 136899998
Q ss_pred cCCCCHHHHHHHHHHHHHH
Q 011842 428 MPNVTIDKLDDFLNELIEN 446 (476)
Q Consensus 428 ~~~~T~edid~~~~~l~~~ 446 (476)
.. +.+.+...++.|.+.
T Consensus 368 ~~--~~~~l~~al~~l~~~ 384 (387)
T PRK08960 368 TQ--SLPRLQEAVERIARG 384 (387)
T ss_pred cC--CHHHHHHHHHHHHHH
Confidence 84 456655555555443
No 101
>PLN02822 serine palmitoyltransferase
Probab=99.89 E-value=5e-21 Score=200.99 Aligned_cols=288 Identities=14% Similarity=0.067 Sum_probs=199.0
Q ss_pred hHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCC
Q 011842 137 SRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLIS 216 (476)
Q Consensus 137 ~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~ 216 (476)
..+.+.++++.+++++|.+. ..++++|++ ++..++.+... ++++|+++...|+++..++++.|.+++.++++
T Consensus 152 ~~~~~~~Lee~La~~~~~~~---~i~~s~G~~-a~~sai~a~~~--~gd~Ii~d~~~H~s~~~~~~ls~~~~~~~~~n-- 223 (481)
T PLN02822 152 TIDVHLDCETKIAKFLGTPD---SILYSYGLS-TIFSVIPAFCK--KGDIIVADEGVHWGIQNGLYLSRSTIVYFKHN-- 223 (481)
T ss_pred CHHHHHHHHHHHHHHhCCCC---EEEECCHHH-HHHHHHHHhCC--CCCEEEEeCCccHHHHHHHHHcCCeEEEECCC--
Confidence 45777888888999998653 266666555 77777776655 89999999999999999999999999999987
Q ss_pred CccCHHHHHHHHHcC------CCCc-EEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCccccccc-cccc
Q 011842 217 GEIDCADFKAKLLQN------KDKP-AIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMP-FVKK 288 (476)
Q Consensus 217 g~~D~~~Le~~l~~~------~~~p-~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~-~~~~ 288 (476)
|.++|+..+++. ++++ .+|+++...+++|.+.|+++|.++|++||+ ++++|++|+.+++. ..+.
T Consensus 224 ---d~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G~i~~L~~i~~l~~k~~~-----~LIvDEa~s~gvlG~~G~G 295 (481)
T PLN02822 224 ---DMESLRNTLEKLTAENKRKKKLRRYIVVEAIYQNSGQIAPLDEIVRLKEKYRF-----RVLLDESNSFGVLGKSGRG 295 (481)
T ss_pred ---CHHHHHHHHHHHhhhhcccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCC-----EEEEECCccccccCCCCCC
Confidence 677777766531 1122 477777788999999999999999999999 99999999855432 1111
Q ss_pred C-CCCCCc-ccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcC-CccccCCCCCcccCCCCChhHHHHHHHHHHhC-hh
Q 011842 289 A-PKVSFK-KPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSS-NVEYLASRDATIMGSRNGHAPIFLWYTLNRKG-YK 364 (476)
Q Consensus 289 ~-~~~~~~-~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~-~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g-~~ 364 (476)
. ..+... ..+|+++.++.|.++. . .|+++.+.+.++.+.. ...|. +.++.+ +..+.+++..+. .+
T Consensus 296 ~~e~~~v~~~~~dii~~s~sKalg~-~-GG~i~g~~~ii~~~~~~~~~~~------fsa~lP---p~~~~Aa~~aL~~l~ 364 (481)
T PLN02822 296 LSEHFGVPIEKIDIITAAMGHALAT-E-GGFCTGSARVVDHQRLSSSGYV------FSASLP---PYLASAAITAIDVLE 364 (481)
T ss_pred hHHHcCCCCCCCeEEEecchhhhhh-C-CeEEEcCHHHHHHHHhcCCcee------eccccC---HHHHHHHHHHHHHHH
Confidence 1 012221 2379999999999873 2 3888888877665532 22222 222221 233333333321 12
Q ss_pred cHHHHHHHHHHHHHHHHHHHHhc-CCeEeecCCeeEEEEecCC-------c----HHHhh------ceeeccc-------
Q 011842 365 GFQKEVQKCLRNAHYLKDRLLDA-GISAMLNELSSTVVFERPQ-------D----EEFVR------RWQLACQ------- 419 (476)
Q Consensus 365 g~~~~~~~~~~~a~~l~~~L~~~-g~~~~~~~~~~iv~f~~~~-------~----~~~~~------~~~l~~~------- 419 (476)
...+.++++++++++|.+.|++. |+....++.++++.+..++ + .++.+ ++.+...
T Consensus 365 ~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~spi~~l~l~~~~~~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~ 444 (481)
T PLN02822 365 DNPSVLAKLKENIALLHKGLSDIPGLSIGSNTLSPIVFLHLEKSTGSAKEDLSLLEHIADRMLKEDSVLVVVSKRSTLDK 444 (481)
T ss_pred hCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEEEEeCCCcccccchHHHHHHHHHHHHhcCCEEEEeeCCCCcCC
Confidence 23578889999999999999986 6554445667777766542 1 12222 2222211
Q ss_pred ---CCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 011842 420 ---GNIAHVVVMPNVTIDKLDDFLNELIENRSTWY 451 (476)
Q Consensus 420 ---~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~ 451 (476)
...+|++++..+|++||++++++|+++.+...
T Consensus 445 ~~~~~~lRi~is~~~t~edI~~~~~~l~~~~~~~~ 479 (481)
T PLN02822 445 CRLPVGIRLFVSAGHTESDILKASESLKRVAASVL 479 (481)
T ss_pred CCCCCcEEEEECCCCCHHHHHHHHHHHHHHHHHHh
Confidence 23699999999999999999999999877654
No 102
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.89 E-value=1.6e-20 Score=192.45 Aligned_cols=287 Identities=14% Similarity=0.087 Sum_probs=196.6
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcc-cEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCC
Q 011842 136 HSRQFEVGVLDWFARLWELENNEY-WGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCL 214 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~-~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~ 214 (476)
+..++++++.+|+.+.+|.+.+.. .+++|+|+++++..++.+... +|+.|++++++|..+...++.+|++++.+|++
T Consensus 68 G~~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~~l~~~~~~~~~--~gd~vlv~~P~y~~~~~~~~~~G~~v~~v~~~ 145 (383)
T TIGR03540 68 GMLAYRQAVADWYKRRFGVELDPETEVLSLIGSKEGIAHIPLAFVN--PGDIVLVPDPGYPVYRIGTLFAGGEPYEMPLK 145 (383)
T ss_pred CCHHHHHHHHHHHHHhhCCCCCCCCeEEECCCcHHHHHHHHHHhCC--CCCEEEEeCCCCcchHHHHHhcCCEEEEEecC
Confidence 456899999999998888764333 477899999999988877765 89999999999999999999999999999997
Q ss_pred CC--CccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCcccccccccccC
Q 011842 215 IS--GEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKA 289 (476)
Q Consensus 215 ~~--g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~ 289 (476)
.+ ..+|+++|++.+.++++ +|++++++|+||.+-+ +++|+++|++||+ ++++|++|+.+.+......
T Consensus 146 ~~~g~~~d~~~l~~~~~~~~~---~v~i~~P~NPtG~~~~~~~~~~i~~~a~~~~~-----~ii~De~y~~l~~~~~~~~ 217 (383)
T TIGR03540 146 EENGFLPDFDAIPEDIAKKAK---LMFINYPNNPTGAVAPLKFFKELVEFAKEYNI-----IVCHDNAYSEITFDGYKAP 217 (383)
T ss_pred cccCCccCHHHHHhhccccce---EEEEeCCCCCcCccCCHHHHHHHHHHHHHcCE-----EEEEecchhhhccCCCCCc
Confidence 43 45799999998865443 7888889999999977 7899999999999 9999999986554322222
Q ss_pred CCCCCc--ccccEEEEcCCCCCC-CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHh--Chh
Q 011842 290 PKVSFK--KPIGSVSVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRK--GYK 364 (476)
Q Consensus 290 ~~~~~~--~~~Dsi~~s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~--g~~ 364 (476)
+..... ....++..++.|.++ .++++|+++.++++++.+.....+.. .+.+ .+.+.++...+ +.+
T Consensus 218 ~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~i~~~~l~~~~~~~~~~~~-------~~~~---~~~q~~~~~~l~~~~~ 287 (383)
T TIGR03540 218 SFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMAVGNADLIAGLGKVKTNVD-------SGVF---QAIQYAAIAALNGPQD 287 (383)
T ss_pred CcccCCCcccCEEEEEecccccCCccceeeEEeCCHHHHHHHHHHHHhcc-------cCCC---hHHHHHHHHHHhCCHH
Confidence 111211 123456678889885 77899999998877665532211110 0111 12223333333 234
Q ss_pred cHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecCC---cHHH----h--hceeecc-------cCCEEEEEEc
Q 011842 365 GFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERPQ---DEEF----V--RRWQLAC-------QGNIAHVVVM 428 (476)
Q Consensus 365 g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~---~~~~----~--~~~~l~~-------~~~~lRv~~~ 428 (476)
.+++..+++.++++.+.+.|++.|+....+.....+.+..++ ..++ . +++.+.. ..+.+|+++.
T Consensus 288 ~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~ 367 (383)
T TIGR03540 288 VVKEIRKIYQRRRDLLLEALKKIGIDVEKPKATFYVWVPVPEGYTSAEFAARLLEETGVVVTPGVGFGEYGEGYIRISLT 367 (383)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEecCCCcceEEEEECCCCCCHHHHHHHHHHHCCEEEecchhhCccCCCeEEEEec
Confidence 456667778889999999999987644433334445555543 2222 2 2333321 1368999986
Q ss_pred CCCCHHHHHHHHHHHH
Q 011842 429 PNVTIDKLDDFLNELI 444 (476)
Q Consensus 429 ~~~T~edid~~~~~l~ 444 (476)
.+.++++..++.|.
T Consensus 368 --~~~~~l~~~l~~l~ 381 (383)
T TIGR03540 368 --VPDERLEEAVARIK 381 (383)
T ss_pred --CCHHHHHHHHHHHh
Confidence 45666666665553
No 103
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.89 E-value=3.4e-21 Score=188.92 Aligned_cols=256 Identities=13% Similarity=-0.009 Sum_probs=188.7
Q ss_pred chhhHHHHHHHHHHHHHHcCCCC-CcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEe
Q 011842 134 GVHSRQFEVGVLDWFARLWELEN-NEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVD 212 (476)
Q Consensus 134 ~~~~~~le~~~~~~la~l~g~~~-~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~ 212 (476)
+.+.+++.+.+++.++.++|... ...++.+|.|+.+|++.++++..+ +||+|++-++.+.++....++.|...+.|+
T Consensus 68 ~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~~l~~--~GDeVii~eP~fd~Y~~~~~maG~tpv~v~ 145 (420)
T KOG0257|consen 68 GYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALLGLLN--PGDEVIVFEPFFDCYIPQVVMAGGTPVFVP 145 (420)
T ss_pred cCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHHHHcC--CCCEEEEecCcchhhhhHHhhcCCcceeec
Confidence 44678999999999999887652 234599999999999999999988 999999999999999999999999999988
Q ss_pred CC--------CCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCcccc
Q 011842 213 CL--------ISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGL 281 (476)
Q Consensus 213 ~~--------~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~ 281 (476)
.. +++.+|.+.||.++.++|+ +|++++|.|++|.+.+ |++|++||++||+ |+++|++|...
T Consensus 146 ~~~~~g~~~s~~~~~D~~~le~~~t~kTk---~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~-----lvisDevYe~~ 217 (420)
T KOG0257|consen 146 LKPKEGNVSSSDWTLDPEELESKITEKTK---AIILNTPHNPTGKVFSREELERIAELCKKHGL-----LVISDEVYEWL 217 (420)
T ss_pred cccccccccCccccCChHHHHhhccCCcc---EEEEeCCCCCcCcccCHHHHHHHHHHHHHCCE-----EEEEhhHhHHH
Confidence 76 3578999999999999887 8999999999999965 8999999999999 99999999988
Q ss_pred cccccccCCCCC--C-cccccEEEEcCCC-CCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChh--HHHHH
Q 011842 282 MMPFVKKAPKVS--F-KKPIGSVSVSGHK-FVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHA--PIFLW 355 (476)
Q Consensus 282 ~~~~~~~~~~~~--~-~~~~Dsi~~s~hK-~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~--~l~~~ 355 (476)
+++..++..... + -++.-.+ .|+.| +.+++|++||++.++.++..+...+++. .+.++.+... +.++.
T Consensus 218 v~d~~~h~r~aslPgm~ertitv-gS~gKtf~~TGWrlGW~igp~~L~~~~~~vh~~~-----~~~~~Tp~q~A~a~a~~ 291 (420)
T KOG0257|consen 218 VYDGNKHIRIASLPGMYERTITV-GSFGKTFGVTGWRLGWAIGPKHLYSALFPVHQNF-----VFTCPTPIQEASAAAFA 291 (420)
T ss_pred hhCCCcceeeecCCchhheEEEe-ccccceeeeeeeeeeeeechHHhhhhHHHHhhcc-----ccccCcHHHHHHHHHHh
Confidence 876554432111 1 1223333 44555 5578999999999555555443333332 1222222111 12222
Q ss_pred HHHHHhCh---hcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecC
Q 011842 356 YTLNRKGY---KGFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERP 405 (476)
Q Consensus 356 ~~l~~~g~---~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~ 405 (476)
..+..... .-.+.+.+.+.++++.|.+.|.+.|+....++++..+....+
T Consensus 292 ~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~lg~~v~~p~gayyl~adfs 344 (420)
T KOG0257|consen 292 LELACLQPGGSYFITELVKEYKEKRDILAKALEELGLKVTGPEGAYYLWADFS 344 (420)
T ss_pred hhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCceEEEEecc
Confidence 22221111 223447888999999999999999988777777766654443
No 104
>PRK07777 aminotransferase; Validated
Probab=99.89 E-value=1.5e-20 Score=193.03 Aligned_cols=292 Identities=15% Similarity=0.079 Sum_probs=201.6
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcc-cEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCC
Q 011842 136 HSRQFEVGVLDWFARLWELENNEY-WGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCL 214 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~-~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~ 214 (476)
+..++++++.+++.+.+|.+.+.. .+++|+|+++|+..++.+... +++.|++..+.|.++..+++..|++++.++.+
T Consensus 62 g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~~~~--~gd~vli~~p~y~~~~~~~~~~g~~~~~~~~~ 139 (387)
T PRK07777 62 GIPELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEAIAAAVLGLVE--PGDEVLLIEPYYDSYAAVIAMAGAHRVPVPLV 139 (387)
T ss_pred CCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHHHHhcC--CCCEEEEeCCCchhhHHHHHHCCCEEEEeecC
Confidence 567999999999998888864332 489999999999888876654 88999999999999999999999999999986
Q ss_pred CC---CccCHHHHHHHHHcCCCCcEEEEEeeCCCcccccc---CHHHHHHHHHHhCCCCCceEEEEecCccccccccccc
Q 011842 215 IS---GEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVD---DLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKK 288 (476)
Q Consensus 215 ~~---g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id---~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~ 288 (476)
++ +.+|+++|++.+.++++ +|+++++.++||.+- ++++|+++|++|++ ++++|++|+.+.+....+
T Consensus 140 ~~~~~~~~d~~~l~~~~~~~~~---~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~-----~li~De~y~~~~~~~~~~ 211 (387)
T PRK07777 140 PDGRGFALDLDALRAAVTPRTR---ALIVNSPHNPTGTVLTAAELAAIAELAVEHDL-----LVITDEVYEHLVFDGARH 211 (387)
T ss_pred CccCCCcCCHHHHHHhcCcccE---EEEEcCCCCCCCccCCHHHHHHHHHHHHhcCc-----EEEEeccchhcccCCCCc
Confidence 53 46999999998866543 777888999999974 58899999999999 999999998765432222
Q ss_pred CCCCCCc--ccccEEEEcCCCCCC-CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhc
Q 011842 289 APKVSFK--KPIGSVSVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKG 365 (476)
Q Consensus 289 ~~~~~~~--~~~Dsi~~s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g 365 (476)
.+..... ...+++..|++|.++ .++++|+++.++++++.+.....|.. ...+. .....+..++.. +..-
T Consensus 212 ~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~l~~~~~~~~~~~~-----~~~~~--~~q~~~~~~l~~-~~~~ 283 (387)
T PRK07777 212 LPLATLPGMRERTVTISSAAKTFNVTGWKIGWACGPAPLIAAVRAAKQYLT-----YVGGA--PFQPAVAHALDH-EDAW 283 (387)
T ss_pred ccHhhCCCCcCcEEEEeechhhccCcCceeEEEecCHHHHHHHHHHHhhcc-----cCCCC--HHHHHHHHHHhC-CcHH
Confidence 1111111 225678899999987 68899999998887665543222221 11111 111111112221 2334
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecC-----CcHHHhh------ceee-cc---------cCCEEE
Q 011842 366 FQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERP-----QDEEFVR------RWQL-AC---------QGNIAH 424 (476)
Q Consensus 366 ~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~-----~~~~~~~------~~~l-~~---------~~~~lR 424 (476)
+++..+...++++++.+.|++.++....++....+++..+ ++.++.+ +..+ +. ..+.+|
T Consensus 284 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~R 363 (387)
T PRK07777 284 VAALRDSLQAKRDRLAAGLAEAGFEVHDSAGTYFLCADPRPLGYDDGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVR 363 (387)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCccCCCcceEEEecccccCCCCHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEE
Confidence 5666778888999999999988755433333444444432 2233322 2222 11 135799
Q ss_pred EEEcCCCCHHHHHHHHHHHHHHH
Q 011842 425 VVVMPNVTIDKLDDFLNELIENR 447 (476)
Q Consensus 425 v~~~~~~T~edid~~~~~l~~~~ 447 (476)
+++.. ++++++..++.|.+..
T Consensus 364 i~~~~--~~~~l~~~l~~l~~~~ 384 (387)
T PRK07777 364 FAFCK--RDDTLDEAIRRLRALR 384 (387)
T ss_pred EEecC--CHHHHHHHHHHHHHHh
Confidence 98863 6889888888887643
No 105
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.89 E-value=5.8e-21 Score=203.02 Aligned_cols=325 Identities=12% Similarity=0.032 Sum_probs=212.1
Q ss_pred cccCCCCcCCc--chHHHHHHHHHhhCCCCCCcccCccchhhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHH
Q 011842 98 HHLGYPYNLDF--DYGALAQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGI 175 (476)
Q Consensus 98 ~~~g~p~~~~~--~~~~l~~~l~~~~n~~g~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al 175 (476)
...|-|...++ +...+..+....... .. ++...+..++++++.+++.+..+.+.+..++++|+|+++++..++
T Consensus 151 l~~G~p~~~~~~~p~~~~~~~~~~~~~~--~~---Y~~~~G~~~lReaia~~~~~~~~~~~~~~~I~it~G~~eal~~~~ 225 (517)
T PRK13355 151 LNIGNPAPFGFRTPDEVVYDMAQQLTDT--EG---YSDSKGLFSARKAIMQYAQLKGLPNVDVDDIYTGNGVSELINLSM 225 (517)
T ss_pred ecCcCCCcCCCCCCHHHHHHHHHHhhcC--CC---CCCCcChHHHHHHHHHHHHhcCCCCCChhHEEEeCcHHHHHHHHH
Confidence 35567765555 444455544433221 11 222336789999999998775543333346999999999999988
Q ss_pred HHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCC--CCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC-
Q 011842 176 LVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLI--SGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD- 252 (476)
Q Consensus 176 ~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~--~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~- 252 (476)
.+..+ ||+.|+++.++|..+...+++.|++++.+++++ ++.+|+++|++++.++++ +|++++|+|+||.+-+
T Consensus 226 ~~l~~--~Gd~Vli~~P~y~~y~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~k---~i~i~nP~NPTG~v~~~ 300 (517)
T PRK13355 226 SALLD--DGDEVLIPSPDYPLWTACVNLAGGTAVHYRCDEQSEWYPDIDDIRSKITSRTK---AIVIINPNNPTGALYPR 300 (517)
T ss_pred HHhCC--CCCEEEEcCCCCcCHHHHHHHCCCEEEEeecCcccCCCCCHHHHHHhcCcCce---EEEEECCCCCCCcCcCH
Confidence 88765 999999999999999999999999999999874 467999999999876665 7888899999999977
Q ss_pred --HHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCcccccEE-EEcCCCC-CCCCCCceeEEee--hhh--
Q 011842 253 --LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKPIGSV-SVSGHKF-VGCPMPCGVQITR--MEH-- 324 (476)
Q Consensus 253 --l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~~Dsi-~~s~hK~-l~~p~~~G~l~~~--~~~-- 324 (476)
+++|+++|++|++ +|++|++|..+.+....+.+.........++ ..++.|. .++++++||++++ .++
T Consensus 301 ~~l~~i~~~a~~~~~-----~ii~DE~Y~~~~~~~~~~~s~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~i~~~~~~~~~ 375 (517)
T PRK13355 301 EVLQQIVDIAREHQL-----IIFSDEIYDRLVMDGLEHTSIASLAPDLFCVTFSGLSKSHMIAGYRIGWMILSGNKRIAK 375 (517)
T ss_pred HHHHHHHHHHHHcCc-----EEEEehhhhhhcCCCCCcccHHHhCCCCeEEEEecchhhccCcccceEEEEeeCchhhHH
Confidence 8899999999999 9999999987665432222211221122233 3567786 5789999999964 322
Q ss_pred --hhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhCh-hcHHHHH---HHHHHHHHHHHHHHHhcCCeEeecCCee
Q 011842 325 --INVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGY-KGFQKEV---QKCLRNAHYLKDRLLDAGISAMLNELSS 398 (476)
Q Consensus 325 --~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~-~g~~~~~---~~~~~~a~~l~~~L~~~g~~~~~~~~~~ 398 (476)
++.+... ... ..+ ...+.++++..++.. ..+++.+ ++..+.++++.+.|++.+...+.+|..+
T Consensus 376 ~~~~~l~~~-~~~-------~~~---~~~~~q~a~~~aL~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~~p~g~ 444 (517)
T PRK13355 376 DYIEGLNML-ANM-------RLC---SNVPAQSIVQTALGGHQSVKDYLVPGGRVYEQRELVYNALNAIPGISAVKPKAA 444 (517)
T ss_pred HHHHHHHHH-hcC-------cCC---cChHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCCCee
Confidence 2222110 010 001 123455555555532 1223332 3455677889999988733344455555
Q ss_pred EEEE-ecCC-------cHHHhh------ceee-cc------cCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 011842 399 TVVF-ERPQ-------DEEFVR------RWQL-AC------QGNIAHVVVMPNVTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 399 iv~f-~~~~-------~~~~~~------~~~l-~~------~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~ 450 (476)
.++| +.+. +.++.. +..+ +. ..+++|+++. .+.++|+..++.|.+..+..
T Consensus 445 fy~~~~l~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~Ris~~--~~~~~l~~a~~rl~~~~~~~ 515 (517)
T PRK13355 445 FYIFPKIDVKKFNIHDDEQFALDLLHDKKVLIVQGTGFNWDKPDHFRVVYL--PRLEDLEDAMDRLADFFSYY 515 (517)
T ss_pred eEEEeecCcccCCCCCHHHHHHHHHHhCCEEEeCcchhCCCCcCEEEEEeC--CCHHHHHHHHHHHHHHHHHh
Confidence 5555 4431 223221 2222 11 2468999984 67899999888888876543
No 106
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.89 E-value=1.6e-20 Score=193.29 Aligned_cols=285 Identities=12% Similarity=0.072 Sum_probs=195.1
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcc-cEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCC
Q 011842 136 HSRQFEVGVLDWFARLWELENNEY-WGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCL 214 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~-~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~ 214 (476)
+..++++++++|+.+.+|.+.++. .+++|+|+++++..++.+..+ ||+.|++++++|..+...++..|++++.+|++
T Consensus 74 G~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~~~al~~~~~~~~~--~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~ 151 (394)
T PRK05942 74 GTASFRQAITDWYHRRYGVELDPDSEALPLLGSKEGLTHLALAYVN--PGDVVLVPSPAYPAHFRGPLIAGAQIYPIILK 151 (394)
T ss_pred CCHHHHHHHHHHHHHHHCCCcCCCCeEEEccChHHHHHHHHHHhCC--CCCEEEEcCCCCcchHHHHHHcCCEEEEeecC
Confidence 456999999999998888654333 478899999999988877765 99999999999999988889999999999987
Q ss_pred CC--CccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCcccccccccccC
Q 011842 215 IS--GEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKA 289 (476)
Q Consensus 215 ~~--g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~ 289 (476)
.+ +.+|+++|++.+.++++ ++++++++|+||.+-+ +++|+++|++||+ ++++|++|+.+.+......
T Consensus 152 ~~~~~~~d~~~l~~~~~~~~k---~i~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~-----~iI~De~y~~~~~~~~~~~ 223 (394)
T PRK05942 152 PENDWLIDLSSIPEEVAQQAK---ILYFNYPSNPTTATAPREFFEEIVAFARKYEI-----MLVHDLCYAELAFDGYQPT 223 (394)
T ss_pred CccCCccCHHHHHHhccccce---EEEEcCCCCCCCCcCCHHHHHHHHHHHHHcCe-----EEEEeccchhhccCCCCCC
Confidence 43 46999999998875544 7888889999999977 8899999999999 9999999986554322111
Q ss_pred CCCCCc--ccccEEEEcCCCCC-CCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHh--Chh
Q 011842 290 PKVSFK--KPIGSVSVSGHKFV-GCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRK--GYK 364 (476)
Q Consensus 290 ~~~~~~--~~~Dsi~~s~hK~l-~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~--g~~ 364 (476)
+..++. ....++..++.|.+ ..++++|++++++++++.+.....+.. .+.+ .+.+.++...+ ..+
T Consensus 224 ~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i~~~~~l~~~l~~~~~~~~-------~~~~---~~~q~~~~~~l~~~~~ 293 (394)
T PRK05942 224 SLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVVGNRHIIQGLRTLKTNLD-------YGIF---SALQKAAETALQLPDS 293 (394)
T ss_pred ChhhCCCccccEEEEecchhccCChhhheeeeecCHHHHHHHHHHHhhcc-------cCCC---HHHHHHHHHHHhCcHH
Confidence 112221 12335567788966 578999999998887766543222210 1111 12222222332 234
Q ss_pred cHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCee-EEEEecCC---cHHHh------hceee-c------ccCCEEEEEE
Q 011842 365 GFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSS-TVVFERPQ---DEEFV------RRWQL-A------CQGNIAHVVV 427 (476)
Q Consensus 365 g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~-iv~f~~~~---~~~~~------~~~~l-~------~~~~~lRv~~ 427 (476)
.+++..+++.++++++.+.|++.|+. +.++.++ .+.+..+. +.++. .+..+ + ...+++|+++
T Consensus 294 ~~~~~~~~~~~~~~~~~~~L~~~~~~-~~~~~~~~f~~~~~~~~~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~ 372 (394)
T PRK05942 294 YLQQVQERYRTRRDFLIQGLGELGWN-IPPTKATMYLWVPCPVGMGSTDFALNVLQKTGVVVTPGNAFGEGGEGYVRISL 372 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCe-ecCCCeeeEEEEECCCCCCHHHHHHHHHHHCCEEEeCChhhCcCCCCeEEEEe
Confidence 45667777888899999999888764 3444554 44455542 22222 23333 2 1246899998
Q ss_pred cCCCCHHHHHHHHHHHHHH
Q 011842 428 MPNVTIDKLDDFLNELIEN 446 (476)
Q Consensus 428 ~~~~T~edid~~~~~l~~~ 446 (476)
. . +.+++.++|+++
T Consensus 373 ~--~---~~~~l~~~l~~l 386 (394)
T PRK05942 373 I--A---DCDRLGEALDRL 386 (394)
T ss_pred c--C---CHHHHHHHHHHH
Confidence 5 2 345555555544
No 107
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.89 E-value=8.2e-21 Score=191.63 Aligned_cols=285 Identities=14% Similarity=0.078 Sum_probs=203.8
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCC-chhHHHHHHHHHHhhCCCcEEEecCCCchH--HHHHHHHcCCeEEEEe
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNC-GTEGNLHGILVGREVFPDGILYASRESHYS--VFKAARMYRMECVKVD 212 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~g-gt~An~~al~aa~~~~p~~~Vl~s~~~H~S--~~~~~~~~G~~v~~v~ 212 (476)
...++.+++++.++++++.+. ++..++++| ||+|+-.++..... +++.+++-....++ +.+.++.+|+ +..+.
T Consensus 34 ~f~~~~~~~~~~l~~l~~~~~-~~~v~~~~gsgT~a~ea~~~nl~~--~~~~~l~i~~G~fg~r~~~~a~~~g~-~~~~~ 109 (349)
T TIGR01364 34 EFEAVANEAESDLRELLNIPD-NYEVLFLQGGATGQFAAVPLNLLA--EGKVADYIVTGAWSKKAAKEAKKYGV-VNVVA 109 (349)
T ss_pred HHHHHHHHHHHHHHHHhCCCC-CceEEEEcCCchHHHHHHHHhcCC--CCCeEEEEECCHHHHHHHHHHHHhCC-cEEEe
Confidence 345888899999999999853 355777766 89998888777654 55544443334433 4678888899 77777
Q ss_pred CCCCC----ccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCccccccccccc
Q 011842 213 CLISG----EIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKK 288 (476)
Q Consensus 213 ~~~~g----~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~ 288 (476)
.++.+ .+|+++++. .+ .+.+|.+++..|.||...| ++++.+++ +++||++++.+..|
T Consensus 110 ~~~~~~~~~~~~~~~~~~--~~---~~~~v~~th~ETstGv~~~-----~l~~~~~~-----l~iVDavss~g~~~---- 170 (349)
T TIGR01364 110 SGKEGNYTKIPDPSTWEI--SE---DAAYVHYCANETIHGVEFR-----ELPDVKNA-----PLVADMSSNILSRP---- 170 (349)
T ss_pred ccccCCCCCCCCHHhcCC--CC---CCCEEEEcCCCCcccEecc-----eecccCCC-----eEEEEccccccCcc----
Confidence 65322 356665542 22 3458999999999999876 66777899 99999999887776
Q ss_pred CCCCCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCC-ccccCC----CCCcccCCCCChhHHHHHHHHHHhCh
Q 011842 289 APKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSN-VEYLAS----RDATIMGSRNGHAPIFLWYTLNRKGY 363 (476)
Q Consensus 289 ~~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~-~~yl~~----~~~~~~~sr~~~~~l~~~~~l~~~g~ 363 (476)
+++.+ .|++++++||+++ |.|.|+++++++.++.+... ..|... ......+|.+....+++..+++.+..
T Consensus 171 ---id~~~-~d~~~~ssqK~lg-P~Glg~l~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~al~~al~~l~~ 245 (349)
T TIGR01364 171 ---IDVSK-FGLIYAGAQKNIG-PAGLTVVIVRKDLLGRASRITPSMLNYKIHAENDSMYNTPPTFAIYVSGLVFKWLKE 245 (349)
T ss_pred ---CCHHH-ccEEEEecccccC-CCceEEEEECHHHHhhcccCCCCcchHHHHHhcCCCCCCCcHHHHHHHHHHHHHHHH
Confidence 55543 6799999999997 99999999999987655322 222210 11223467776667788889999888
Q ss_pred h-cHHHHHHHHHHHHHHHHHHHHhcC-CeEeec-C--Ce-eEEEEecCCc---HHHh-----hceeeccc---CCEEEEE
Q 011842 364 K-GFQKEVQKCLRNAHYLKDRLLDAG-ISAMLN-E--LS-STVVFERPQD---EEFV-----RRWQLACQ---GNIAHVV 426 (476)
Q Consensus 364 ~-g~~~~~~~~~~~a~~l~~~L~~~g-~~~~~~-~--~~-~iv~f~~~~~---~~~~-----~~~~l~~~---~~~lRv~ 426 (476)
+ |++++.++..++++++++.|++.+ +..... + .+ .+++|..++. .++. +++.+... .+.+|++
T Consensus 246 ~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~sf~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~g~vRvS 325 (349)
T TIGR01364 246 QGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNVVFTLGNEELEKRFLKEAEERGLVSLKGHRSVGGMRAS 325 (349)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEEEEecCChhHhHHHHHHHHHCCCcccCCccccCeeEEE
Confidence 8 799999999999999999999995 433322 1 23 5677887642 2221 23322211 3689999
Q ss_pred EcCCCCHHHHHHHHHHHHHHHH
Q 011842 427 VMPNVTIDKLDDFLNELIENRS 448 (476)
Q Consensus 427 ~~~~~T~edid~~~~~l~~~~~ 448 (476)
++.++|.||||+|+++|+++.+
T Consensus 326 ~~~~nt~edid~l~~al~~~~~ 347 (349)
T TIGR01364 326 IYNAMPLEGVQALVDFMKEFQK 347 (349)
T ss_pred CcCCCCHHHHHHHHHHHHHHHH
Confidence 9999999999999999998654
No 108
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.89 E-value=1.6e-20 Score=191.43 Aligned_cols=286 Identities=13% Similarity=-0.007 Sum_probs=204.5
Q ss_pred hHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCC
Q 011842 137 SRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLIS 216 (476)
Q Consensus 137 ~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~ 216 (476)
..++++++.+|+.+..|.+.+..++++|+|+++++...+.+..+ ||+.|++..++|..+...++..|++++.++.+++
T Consensus 67 ~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~l~~~~~~~~~--~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~ 144 (368)
T PRK03317 67 AVALRADLAAYLTAQTGVGLTVENVWAANGSNEILQQLLQAFGG--PGRTALGFVPSYSMHPIIARGTHTEWVEGPRAAD 144 (368)
T ss_pred hHHHHHHHHHHhhhhccCCCChhhEEECCCHHHHHHHHHHHhcC--CCCEEEEeCCChHHHHHHHHhcCCeeEEcccCCC
Confidence 45899999999988887765556799999999999998888776 8999999999999999999999999988887767
Q ss_pred CccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCcc
Q 011842 217 GEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKK 296 (476)
Q Consensus 217 g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~ 296 (476)
+.+|+++|++++.+.. +.+++++++.|+||.+.+.+++.++++.+++ ++++|++|+.+..... .+......
T Consensus 145 ~~~d~~~l~~~~~~~~--~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~-----~lI~DE~y~~~~~~~~--~~~~~~~~ 215 (368)
T PRK03317 145 FTLDVDAAVAAIAEHR--PDVVFLTSPNNPTGTALPLDDVEAILDAAPG-----IVVVDEAYAEFRRSGT--PSALTLLP 215 (368)
T ss_pred CCCCHHHHHHHHhccC--CCEEEEeCCCCCCCCCCCHHHHHHHHHHCCc-----eEEEeCCchhhcccCC--cCHHHHHH
Confidence 8899999999997532 2266778999999999999999999999999 9999999986543211 11111111
Q ss_pred -ccc-EEEEcCCCCCC-CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhC-hhcHHHHHHH
Q 011842 297 -PIG-SVSVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKG-YKGFQKEVQK 372 (476)
Q Consensus 297 -~~D-si~~s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g-~~g~~~~~~~ 372 (476)
.-+ ++..++.|.++ +++++|+++.++++++.+..... ++..+ .+.+.++...+. .+.+.+.+++
T Consensus 216 ~~~~~i~~~SfSK~~g~~GlRiG~~~~~~~~~~~l~~~~~-------~~~~s-----~~~~~a~~~~l~~~~~~~~~~~~ 283 (368)
T PRK03317 216 EYPRLVVSRTMSKAFAFAGGRLGYLAAAPAVVDALRLVRL-------PYHLS-----AVTQAAARAALRHADELLASVAA 283 (368)
T ss_pred hCCCEEEEEechhhhccchhhhhhhhCCHHHHHHHHhcCC-------CCCCC-----HHHHHHHHHHhhCHHHHHHHHHH
Confidence 113 45568999886 68999999998887766642110 11111 233434333332 2334555667
Q ss_pred HHHHHHHHHHHHHhcCCeEeecCCeeEEEEe-cCCcHHHh-----hceeecc--cCCEEEEEEcCCCCHHHHHHHHHHHH
Q 011842 373 CLRNAHYLKDRLLDAGISAMLNELSSTVVFE-RPQDEEFV-----RRWQLAC--QGNIAHVVVMPNVTIDKLDDFLNELI 444 (476)
Q Consensus 373 ~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~-~~~~~~~~-----~~~~l~~--~~~~lRv~~~~~~T~edid~~~~~l~ 444 (476)
..++++++.+.|++.|+. +.++..+.+.|. .++..++. +++.+.. ..+++|++++ +.+++++++++|+
T Consensus 284 ~~~~~~~l~~~L~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~iRi~~~---~~~~~~~~~~~l~ 359 (368)
T PRK03317 284 LRAERDRVVAWLRELGLR-VAPSDANFVLFGRFADRHAVWQGLLDRGVLIRDVGIPGWLRVTIG---TPEENDAFLAALA 359 (368)
T ss_pred HHHHHHHHHHHHHHCCCE-eCCCCCcEEEEeccCCHHHHHHHHHHCCEEEEeCCCCCeEEEecC---CHHHHHHHHHHHH
Confidence 778888899999988864 344555555553 33333332 2333332 2368999874 7899999999999
Q ss_pred HHHHH
Q 011842 445 ENRST 449 (476)
Q Consensus 445 ~~~~~ 449 (476)
++.+.
T Consensus 360 ~~~~~ 364 (368)
T PRK03317 360 EVLAT 364 (368)
T ss_pred HHHHH
Confidence 87653
No 109
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.89 E-value=1.1e-20 Score=194.84 Aligned_cols=287 Identities=15% Similarity=0.109 Sum_probs=191.1
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHH-----HHHcCCeEEE
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKA-----ARMYRMECVK 210 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~-----~~~~G~~v~~ 210 (476)
...++|+.+++++++++|.+.. .++++|||+|+..++.+... ||+.|++++++|.++... ++..|++++.
T Consensus 62 ~~~~l~~~~~~~~~~~~g~~~~---~v~~~sgt~a~~~~l~~l~~--~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~ 136 (402)
T cd00378 62 YVDEIEDLAIERAKKLFGAEYA---NVQPHSGSQANLAVYFALLE--PGDTIMGLDLSHGGHLTHGSFTKVSASGKLFES 136 (402)
T ss_pred HHHHHHHHHHHHHHHHhCCCce---eeecCCcHHHHHHHHHHhcC--CCCEEEEecCccCccccccccccccccceeEEE
Confidence 3457777788999999999742 34545789999988888765 999999999998765332 5667887777
Q ss_pred EeCCC---CCccCHHHHHHHHHc-CCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCccccccccc
Q 011842 211 VDCLI---SGEIDCADFKAKLLQ-NKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFV 286 (476)
Q Consensus 211 v~~~~---~g~~D~~~Le~~l~~-~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~ 286 (476)
++.+. ++.+|+++|++++.+ +++ +++++++. +|...|+++|+++|++||+ ++++|++|..+.....
T Consensus 137 ~~~~~~~~~~~id~~~l~~~i~~~~~~---~v~~~~~~--~~~~~~~~~I~~l~~~~~~-----~li~D~a~~~g~~~~g 206 (402)
T cd00378 137 VPYGVDPETGLIDYDALEKMALEFKPK---LIVAGASA--YPRPIDFKRFREIADEVGA-----YLLVDMAHVAGLVAGG 206 (402)
T ss_pred ecCCcCcccCCcCHHHHHHHHHhCCCC---EEEecCcc--cCCCcCHHHHHHHHHhcCC-----EEEEEccchhhhhhcc
Confidence 76642 589999999999964 333 66665543 4677899999999999999 9999999754332111
Q ss_pred ccCCCCCCcccccEEEEcCCCCCCCCCCceeEEeeh-hhhhhhcCCc-cccCCCCCcccCCCCChhHHHHHHHHHHhChh
Q 011842 287 KKAPKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRM-EHINVLSSNV-EYLASRDATIMGSRNGHAPIFLWYTLNRKGYK 364 (476)
Q Consensus 287 ~~~~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~-~~~~~l~~~~-~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~ 364 (476)
... .... .+|+++.++|||+.+ ++.|++++++ ++.+.+.... .+. .++........+..++......
T Consensus 207 ~~~--~~~~-~~dv~~~s~sK~l~G-~~gg~i~~~~~~~~~~l~~~~~~~~-------~~~~~~~~~~a~~~al~~~~~~ 275 (402)
T cd00378 207 VFP--NPLP-GADVVTTTTHKTLRG-PRGGLILTRKGELAKKINSAVFPGL-------QGGPHLHVIAAKAVALKEALEP 275 (402)
T ss_pred cCC--Cccc-CCcEEEeccccCCCC-CCceEEEeccHHHHHHHHHHhCccc-------cCCchHHHHHHHHHHHHHHhhH
Confidence 111 1122 478999999999954 5678888776 6655553211 111 1111111122222333333223
Q ss_pred cHHHHHHHHHHHHHHHHHHHHhcCCeEee-cCCeeEEEEecCC---c-HHH---hh--ceeec-----------ccCCEE
Q 011842 365 GFQKEVQKCLRNAHYLKDRLLDAGISAML-NELSSTVVFERPQ---D-EEF---VR--RWQLA-----------CQGNIA 423 (476)
Q Consensus 365 g~~~~~~~~~~~a~~l~~~L~~~g~~~~~-~~~~~iv~f~~~~---~-~~~---~~--~~~l~-----------~~~~~l 423 (476)
.+++++++..++++++.+.|++.|+.... +..++++.+..++ + ..+ .+ +..+. .....+
T Consensus 276 ~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~l~~~gI~v~~~~~p~~~~~~~~~~~l 355 (402)
T cd00378 276 EFKAYAKQVVENAKALAEALKERGFKVVSGGTDNHLVLVDLRPKGITGKAAEDALEEAGITVNKNTLPWDPSSPFVPSGI 355 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCeEeecCCCCeEEEEeCCccCCCHHHHHHHHHHcCcEEcCCcCCCCCCCCCCCCee
Confidence 56778888999999999999999876543 3356666666542 1 111 11 22221 123578
Q ss_pred EEEEcC----CCCHHHHHHHHHHHHHHHH
Q 011842 424 HVVVMP----NVTIDKLDDFLNELIENRS 448 (476)
Q Consensus 424 Rv~~~~----~~T~edid~~~~~l~~~~~ 448 (476)
|++++. ..+.+||+.+++.|+++.+
T Consensus 356 Ri~~~~~~~~~~~~~di~~~~~~l~~~~~ 384 (402)
T cd00378 356 RIGTPAMTTRGMGEEEMEEIADFIARALK 384 (402)
T ss_pred EecCHHHHHhCCCHHHHHHHHHHHHHHHh
Confidence 998765 4589999999999988664
No 110
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.89 E-value=3.5e-20 Score=191.30 Aligned_cols=295 Identities=13% Similarity=0.096 Sum_probs=203.2
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcc-cEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCC
Q 011842 136 HSRQFEVGVLDWFARLWELENNEY-WGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCL 214 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~-~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~ 214 (476)
+..++++++++|+.+..|++.+.. .+++|+|+++|+..++.+..+ |++.|++++++|..+...++..|++++.||++
T Consensus 72 G~~~lR~~ia~~l~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~--~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~ 149 (403)
T PRK08636 72 GIYKLRLAICNWYKRKYNVDLDPETEVVATMGSKEGYVHLVQAITN--PGDVAIVPDPAYPIHSQAFILAGGNVHKMPLE 149 (403)
T ss_pred CCHHHHHHHHHHHHHHhCCCCCCCCeEEECCChHHHHHHHHHHhCC--CCCEEEEcCCCCcchHHHHHhcCCEEEEEecc
Confidence 567999999999999888764444 599999999999999888776 99999999999999999999999999999885
Q ss_pred --CCCccCHHHH----HHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCcccccccc
Q 011842 215 --ISGEIDCADF----KAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPF 285 (476)
Q Consensus 215 --~~g~~D~~~L----e~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~ 285 (476)
+++.+|++.| ++++.+...+..++++++|.|+||.+-+ +++|+++|++|++ ||++|++|+.+.+..
T Consensus 150 ~~~~~~~d~~~l~~~l~~~~~~~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~-----~II~De~Y~~l~~~~ 224 (403)
T PRK08636 150 YNEDFELDEDQFFENLEKALRESSPKPKYVVVNFPHNPTTATVEKSFYERLVALAKKERF-----YIISDIAYADITFDG 224 (403)
T ss_pred ccccCccChhhhhhHHHHHHhhccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCc-----EEEEeccchhhccCC
Confidence 3468998855 5555543334568888889999999855 6888899999999 999999998665432
Q ss_pred cccCCCCCCcc--cccEEEEcCCCCC-CCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHh-
Q 011842 286 VKKAPKVSFKK--PIGSVSVSGHKFV-GCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRK- 361 (476)
Q Consensus 286 ~~~~~~~~~~~--~~Dsi~~s~hK~l-~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~- 361 (476)
....+...... ...+.+.|+.|.+ .+++++|+++.++++++.+.....+.. ...+ ...+.++...+
T Consensus 225 ~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~iv~~~~li~~~~~~~~~~~-----~~~~-----~~~q~~~~~~~~ 294 (403)
T PRK08636 225 YKTPSILEVEGAKDVAVESYTLSKSYNMAGWRVGFVVGNKKLVGALKKIKSWLD-----YGMF-----TPIQVAATIALD 294 (403)
T ss_pred CCCCChhcCCCccccEEEEEecccccCCccceeeeeeCCHHHHHHHHHHHHHhc-----ccCC-----hHHHHHHHHHHh
Confidence 11111122211 1223467899998 589999999998887765543222210 0111 11122222222
Q ss_pred -ChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecCC------cHHHhh------ceeecc-------cCC
Q 011842 362 -GYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERPQ------DEEFVR------RWQLAC-------QGN 421 (476)
Q Consensus 362 -g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~------~~~~~~------~~~l~~-------~~~ 421 (476)
....+++..+...++++++.+.|++.++....+.....+.++.++ +.++.+ ++.+.. ..+
T Consensus 295 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~p~~g~~~~~~l~~~~~~~~~~~l~~~ll~~~gV~v~pg~~f~~~~~~ 374 (403)
T PRK08636 295 GDQSCVEEIRETYRKRRDVLIESFANAGWELQKPRASMFVWAKIPEPARHLGSLEFSKQLLTEAKVAVSPGIGFGEYGDE 374 (403)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCcceEEEEECCCccCCCCHHHHHHHHHHhCCEEEecchhhCcCCCC
Confidence 123355666777788888999999887643334455666666552 123321 233311 136
Q ss_pred EEEEEEcCCCCHHHHHHHHHHHHHHHHH
Q 011842 422 IAHVVVMPNVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 422 ~lRv~~~~~~T~edid~~~~~l~~~~~~ 449 (476)
.+|+++. .+.++++..++.|.+..+.
T Consensus 375 ~iRi~~~--~~~~~l~~~~~rl~~~l~~ 400 (403)
T PRK08636 375 YVRIALI--ENENRIRQAARNIKKFLKE 400 (403)
T ss_pred eEEEEec--CCHHHHHHHHHHHHHHHHh
Confidence 8999986 5788888888888777654
No 111
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.89 E-value=2e-20 Score=191.93 Aligned_cols=287 Identities=13% Similarity=0.061 Sum_probs=196.1
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcc-cEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCC
Q 011842 136 HSRQFEVGVLDWFARLWELENNEY-WGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCL 214 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~-~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~ 214 (476)
+..++++++.+|+.+.+|.+.++. ..++|+|+++++..++.+..+ ||+.|++++++|..+...++..|++++.+|.+
T Consensus 70 G~~~lr~aia~~~~~~~g~~~~~~~~ii~t~G~~~~i~~~~~~~~~--~gd~Vl~~~P~y~~~~~~~~~~g~~~~~v~~~ 147 (385)
T PRK09276 70 GMLEFRKAVADWYKRRFGVELDPETEVISLIGSKEGIAHIPLAFVN--PGDVVLVPDPGYPVYKIGTIFAGGEPYFMPLK 147 (385)
T ss_pred CcHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHHHHHHHHhCC--CCCEEEEcCCCCcChHHHHHHcCCEEEEEecC
Confidence 456899999999998888754333 478889999999988877765 89999999999999999999999999999986
Q ss_pred CC--CccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCcccccccccccC
Q 011842 215 IS--GEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKA 289 (476)
Q Consensus 215 ~~--g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~ 289 (476)
.+ +.+|++++++.+.++++ +|++++++|+||.+-+ +++|+++|++||+ |+++|++|+.+.+......
T Consensus 148 ~~~g~~~d~~~l~~~~~~~~~---~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~-----~ii~De~y~~~~~~~~~~~ 219 (385)
T PRK09276 148 EENGFLPDLDAIPEDVAKKAK---LMFINYPNNPTGAVADLEFFEEVVDFAKKYDI-----IVCHDAAYSEIAYDGYKPP 219 (385)
T ss_pred CCCCCcCCHHHHHHhccccce---EEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCc-----EEEEecchhheecCCCCCC
Confidence 43 45899999888865544 7888889999999976 6889999999999 9999999986654321221
Q ss_pred CCCCCc--ccccEEEEcCCCCC-CCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhC--hh
Q 011842 290 PKVSFK--KPIGSVSVSGHKFV-GCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKG--YK 364 (476)
Q Consensus 290 ~~~~~~--~~~Dsi~~s~hK~l-~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g--~~ 364 (476)
+..... ....++..|+.|.+ ..++++|+++.++++++.+.....++.. +. ..+.+.++...+. ..
T Consensus 220 ~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~i~~~~l~~~~~~~~~~~~~-------~~---~~~~q~~~~~~l~~~~~ 289 (385)
T PRK09276 220 SFLEVPGAKDVGIEFHSLSKTYNMTGWRIGFAVGNADLIAGLGKVKSNVDS-------GV---FQAIQEAGIAALNGPQE 289 (385)
T ss_pred ChhccCCCcCCEEEEecchhhcCCcchhheeeeCCHHHHHHHHHHHhhccC-------CC---CHHHHHHHHHHHcCcHH
Confidence 111221 12345667888988 4778999999988776665432222111 01 1223333333332 23
Q ss_pred cHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecCC---cHHH----hh--ceeecc-------cCCEEEEEEc
Q 011842 365 GFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERPQ---DEEF----VR--RWQLAC-------QGNIAHVVVM 428 (476)
Q Consensus 365 g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~---~~~~----~~--~~~l~~-------~~~~lRv~~~ 428 (476)
.+++..++..++++++.+.|++.++....+.....+.+..++ ..++ .+ +..+.. ..+++|+++.
T Consensus 290 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~ 369 (385)
T PRK09276 290 VVEELRKIYQERRDILVEGLRKLGLEVEPPKATFYVWAPVPKGYTSAEFATLLLDKAGVVVTPGNGFGEYGEGYFRIALT 369 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEEECCCCCCHHHHHHHHHHhCCEEECCchhhCCCCCCeEEEEeC
Confidence 356667777888999999999987543333333445555543 2222 21 333321 1368999986
Q ss_pred CCCCHHHHHHHHHHHH
Q 011842 429 PNVTIDKLDDFLNELI 444 (476)
Q Consensus 429 ~~~T~edid~~~~~l~ 444 (476)
.+++++...++.|.
T Consensus 370 --~~~~~l~~~l~~l~ 383 (385)
T PRK09276 370 --VPDERIEEAVERIK 383 (385)
T ss_pred --CCHHHHHHHHHHHh
Confidence 46676666666554
No 112
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.89 E-value=1.6e-21 Score=189.00 Aligned_cols=287 Identities=15% Similarity=0.149 Sum_probs=195.0
Q ss_pred HHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHH--HHHHcC-CeEEEEeCC
Q 011842 138 RQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFK--AARMYR-MECVKVDCL 214 (476)
Q Consensus 138 ~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~--~~~~~G-~~v~~v~~~ 214 (476)
.+.-+++.+++++++|... ++|+++||+||.+++.+..+ |+..||+.+.+|..... +...++ +..+.+...
T Consensus 34 D~~~~~~e~~~ae~~g~~a----~~Fv~sGT~aN~lal~~~~~--~~~~vi~~~~aHi~~~E~Ga~~~~~~~~~~~~~~g 107 (342)
T COG2008 34 DPTTNALEQRIAELFGKEA----ALFVPSGTQANQLALAAHCQ--PGESVICHETAHIYTDECGAPEFFGGGQKLPIVPG 107 (342)
T ss_pred CHHHHHHHHHHHHHhCCce----EEEecCccHHHHHHHHHhcC--CCCeEEEeccccceecccCcHHHHcCCceeccCCC
Confidence 3667778888999999832 99999999999999999886 99999999999987764 334443 444444444
Q ss_pred CCCccCHHHHHHHHHcC----CCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCcccccccccc
Q 011842 215 ISGEIDCADFKAKLLQN----KDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVK 287 (476)
Q Consensus 215 ~~g~~D~~~Le~~l~~~----~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~ 287 (476)
++|.|++++++..|..+ ..+|.+++.|..+ ..|++-| |++|.++||+||+ .||+|||--+-......
T Consensus 108 ~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~t-e~GtVy~l~el~~i~~~~k~~~l-----~LHmDGAR~~nA~valg 181 (342)
T COG2008 108 ADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTAT-EGGTVYPLDELEAISAVCKEHGL-----PLHMDGARLANALVALG 181 (342)
T ss_pred CCCCcCHHHHHHhhcCCCcccCCCceEEEeeccC-CCceecCHHHHHHHHHHHHHhCC-----ceeechHHHHHHHHHcC
Confidence 78999999999999753 3456677776555 7788855 6778899999999 99999995332222211
Q ss_pred cCCCCCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCC-ccccCCCCCcccCCCCChhHHHHHHHHHHhChhcH
Q 011842 288 KAPKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSN-VEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGF 366 (476)
Q Consensus 288 ~~~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~-~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~ 366 (476)
.+..+....+|++++++.|.++.|. -++++.+.++++.+... ..| ++ ..+..++. .++| +-++...-.
T Consensus 182 -~~~~~~~~~~D~v~~~~tK~g~~~~-gAiv~gn~~~~~~a~~~rK~~-Gg-----l~~k~r~l-aA~~--~~~l~~~~~ 250 (342)
T COG2008 182 -VALKTIKSYVDSVSFCLTKGGGAPV-GAIVFGNRDFAKRARRWRKRA-GG-----LMRKARFL-AAQG--LYALEDDVW 250 (342)
T ss_pred -CCHHHHHhhCCEEEEecccCCccee-eeEEEcCHHHHHHHHHHHHHh-cc-----cHhhhhHH-HHHH--HHHHhccHH
Confidence 2223444569999999999999653 34555566565544221 111 00 01111121 1222 222222334
Q ss_pred HHHHHHHHHHHHHHHHHHHhc-CCeEeecCCeeEEEEecCCc--HHH-hhceee------cccCCEEEEEEcCCCCHHHH
Q 011842 367 QKEVQKCLRNAHYLKDRLLDA-GISAMLNELSSTVVFERPQD--EEF-VRRWQL------ACQGNIAHVVVMPNVTIDKL 436 (476)
Q Consensus 367 ~~~~~~~~~~a~~l~~~L~~~-g~~~~~~~~~~iv~f~~~~~--~~~-~~~~~l------~~~~~~lRv~~~~~~T~edi 436 (476)
...-++..++|++|.+.|.+. |..+..++.+|+|+++.+.. +.+ ..+|.. ...+..+|++++..+|++||
T Consensus 251 ~~~~~Han~mA~~La~~~~~~~G~~~~~~~~tN~vf~~l~~~~i~~l~~~~~~~~~~~~~~~~~~~vRfvts~a~~~edv 330 (342)
T COG2008 251 RLAADHANAMAARLAEGLEAKPGVKLAFPVETNMVFVRLPESAIEALRLAGALFYRGVLIGAHGEIVRFVTSWATSEEDV 330 (342)
T ss_pred HHHHHHHHHHHHHHHHhhhhcCCceeccCCcccEEEEECChHHHHHHHhhchhheeeeeccCCCceEEEEeeccCCHHHH
Confidence 555566667799999999964 77766677899999988753 111 112211 11224799999999999999
Q ss_pred HHHHHHHHHHH
Q 011842 437 DDFLNELIENR 447 (476)
Q Consensus 437 d~~~~~l~~~~ 447 (476)
|+|+..+++..
T Consensus 331 ~~~~~~~~~~~ 341 (342)
T COG2008 331 DELVAAIKALL 341 (342)
T ss_pred HHHHHHHHHhh
Confidence 99999998753
No 113
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.89 E-value=8.2e-21 Score=192.54 Aligned_cols=285 Identities=12% Similarity=0.068 Sum_probs=204.5
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHH-HHHHHhhCCCc---EEEecCCCchHHHHHHHHcCCeEEEE
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHG-ILVGREVFPDG---ILYASRESHYSVFKAARMYRMECVKV 211 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~a-l~aa~~~~p~~---~Vl~s~~~H~S~~~~~~~~G~~v~~v 211 (476)
...++.+++++.+++++|.+. +++.++++|++++.+.+ ++.... +++ +|+....+|. +.+.++.+|.. ..+
T Consensus 45 ~f~~~~~~~~~~l~~l~~~~~-~~~v~~~~gsgt~~~Ea~~~nl~~--~g~~~l~i~~G~fg~r-~~~~a~~~g~~-~~~ 119 (360)
T PRK05355 45 EFEAVAEEAEADLRELLNIPD-NYKVLFLQGGASLQFAMVPMNLLG--GGKKADYVDTGSWSKK-AIKEAKKYGEV-NVA 119 (360)
T ss_pred HHHHHHHHHHHHHHHHhCCCC-CcEEEEEcCCchHHHHHHHHhcCC--CCCeEEEEECCHHHHH-HHHHHHHhCCc-eEE
Confidence 345888999999999999843 35577776666665544 444433 443 4444444454 36777888865 666
Q ss_pred eCCC-CCccCHHHHHH-HHHcCCCCcEEEEEeeCCCcccccc-CHHHHHHHHHHhCCCCCceEEEEecCccccccccccc
Q 011842 212 DCLI-SGEIDCADFKA-KLLQNKDKPAIINVNIGTTVKGAVD-DLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKK 288 (476)
Q Consensus 212 ~~~~-~g~~D~~~Le~-~l~~~~~~p~~vv~t~gtt~tG~id-~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~ 288 (476)
..++ .|..+..++++ .|.++. .+|.+++..|.||... ||++| ||+ +++||++++.+..+
T Consensus 120 ~~~~~~g~~~~~~~~~~~l~~~~---~~V~~th~eTstGv~~~~i~~i------~g~-----l~vVDavss~g~~~---- 181 (360)
T PRK05355 120 ASSEDDGFTYIPPLDEWQLSDDA---AYVHYTSNETIDGTEFHELPDT------GDV-----PLVADMSSDILSRP---- 181 (360)
T ss_pred ecccccCCCCCCChhhccCCCCC---CEEEEccCCCcceEecCccccc------CCC-----cEEEEcCccccCcc----
Confidence 6553 56666666666 665544 4899999999999997 77776 899 99999999887776
Q ss_pred CCCCCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcC-CccccCC----CCCcccCCCCChhHHHHHHHHHHhCh
Q 011842 289 APKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSS-NVEYLAS----RDATIMGSRNGHAPIFLWYTLNRKGY 363 (476)
Q Consensus 289 ~~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~-~~~yl~~----~~~~~~~sr~~~~~l~~~~~l~~~g~ 363 (476)
+++.+ .|++++++||+++ |.|.|+++++++.++.+.. ...|+.. ......+|.+....+++..+++.+..
T Consensus 182 ---idv~~-~d~~~~ssqK~lg-P~Glg~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~aL~~aL~~i~~ 256 (360)
T PRK05355 182 ---IDVSK-FGLIYAGAQKNIG-PAGLTIVIVREDLLGRALPSIPSMLDYKTHADNDSMYNTPPTFAIYLAGLVFKWLKE 256 (360)
T ss_pred ---CCHHH-ccEEEEecccccc-CCceEEEEECHHHHhhcccCCChHHHHHHHHhcCCccCCCcHHHHHHHHHHHHHHHH
Confidence 55543 5899999999997 9999999999998766543 2223221 11123477777777888899999888
Q ss_pred h-cHHHHHHHHHHHHHHHHHHHHhcCCeEe-ecC--Ce-eEEEEecCCc---HHHh-----hceeecc---cCCEEEEEE
Q 011842 364 K-GFQKEVQKCLRNAHYLKDRLLDAGISAM-LNE--LS-STVVFERPQD---EEFV-----RRWQLAC---QGNIAHVVV 427 (476)
Q Consensus 364 ~-g~~~~~~~~~~~a~~l~~~L~~~g~~~~-~~~--~~-~iv~f~~~~~---~~~~-----~~~~l~~---~~~~lRv~~ 427 (476)
+ |++++.++..++++++++.|++.|+... .++ .+ .+++|..++. .++. +++.... ..+.+|+|+
T Consensus 257 ~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~v~sf~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~g~vRiS~ 336 (360)
T PRK05355 257 QGGVAAMEKRNQEKAALLYDAIDSSDFYRNPVAPEDRSRMNVPFTLADEELDKKFLAEAKAAGLVGLKGHRSVGGMRASI 336 (360)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCChhhcCCcEEEEEcCChHHHHHHHHHHHHCCCcccCCCCccCcEEEEC
Confidence 8 8999999999999999999999986433 221 24 5688887653 2221 2222211 136799999
Q ss_pred cCCCCHHHHHHHHHHHHHHHH
Q 011842 428 MPNVTIDKLDDFLNELIENRS 448 (476)
Q Consensus 428 ~~~~T~edid~~~~~l~~~~~ 448 (476)
+.++|.+|||+|+++|+++..
T Consensus 337 ~~~nt~eei~~l~~~l~~~~~ 357 (360)
T PRK05355 337 YNAMPLEGVQALVDFMKEFER 357 (360)
T ss_pred CCCCCHHHHHHHHHHHHHHHH
Confidence 999999999999999998654
No 114
>PRK09148 aminotransferase; Validated
Probab=99.89 E-value=5.1e-20 Score=190.16 Aligned_cols=296 Identities=13% Similarity=0.013 Sum_probs=203.1
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcc-cEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCC
Q 011842 136 HSRQFEVGVLDWFARLWELENNEY-WGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCL 214 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~-~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~ 214 (476)
+..++++++++++.+.+|.+.+.. .+++|+|+++++..++.+..+ +|+.|++++++|..+...++..|++++.+|++
T Consensus 69 G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~l~~--~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~ 146 (405)
T PRK09148 69 GIPGLRRAQAAYYARRFGVKLNPDTQVVATLGSKEGFANMAQAITA--PGDVILCPNPSYPIHAFGFIMAGGVIRSVPAE 146 (405)
T ss_pred CCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHhcC--CCCEEEEcCCCCcccHHHHHhcCCEEEEEeCC
Confidence 567999999999998878753333 599999999999988888766 89999999999999988889999999999987
Q ss_pred CCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCH---HHHHHHHHHhCCCCCceEEEEecCcccccccccccCCC
Q 011842 215 ISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDL---DLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPK 291 (476)
Q Consensus 215 ~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l---~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~ 291 (476)
.++. +++++++.+.....++.++++++|+|+||.+-+. ++|+++|++||+ +|++|++|+.+.+......+.
T Consensus 147 ~~~~-~~~~l~~~~~~~~~~~~~v~l~~P~NPtG~~~s~~~l~~l~~~a~~~~~-----~ii~De~Y~~~~~~~~~~~s~ 220 (405)
T PRK09148 147 PDEE-FFPALERAVRHSIPKPIALIVNYPSNPTAYVADLDFYKDVVAFAKKHDI-----IILSDLAYSEIYFDGNPPPSV 220 (405)
T ss_pred CCCC-CccCHHHHHhhccccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCe-----EEEEeccchhhhcCCCCCCCh
Confidence 5443 3556677665443345688899999999999775 688899999999 999999998765432111111
Q ss_pred CCCc--ccccEEEEcCCCCCC-CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhC--hhcH
Q 011842 292 VSFK--KPIGSVSVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKG--YKGF 366 (476)
Q Consensus 292 ~~~~--~~~Dsi~~s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g--~~g~ 366 (476)
.... ....++..|+.|.++ .++++||++.+.++++.+.....++.. +. ..+.+.++...+. ..-+
T Consensus 221 ~~~~~~~~~~i~~~SfSK~~~~pGlR~G~~v~~~~~i~~l~~~~~~~~~-------~~---~~~~q~~~~~~L~~~~~~~ 290 (405)
T PRK09148 221 LQVPGAKDVTVEFTSMSKTFSMAGWRMGFAVGNERLIAALTRVKSYLDY-------GA---FTPIQVAATAALNGPQDCI 290 (405)
T ss_pred hhCCCccCcEEEEeccccccCCcchheeeeeCCHHHHHHHHHHHHHhcc-------CC---ChHHHHHHHHHHhCcHHHH
Confidence 1111 112345788999886 889999999988777666433333211 11 1233344444442 2335
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecCC------cHHHh------hceeecc-------cCCEEEEEE
Q 011842 367 QKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERPQ------DEEFV------RRWQLAC-------QGNIAHVVV 427 (476)
Q Consensus 367 ~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~------~~~~~------~~~~l~~-------~~~~lRv~~ 427 (476)
++..++..++++++.+.|++.++....+...+.+.++.+. ..++. ++..+.. ..+++|+++
T Consensus 291 ~~~~~~~~~~r~~l~~~L~~~~~~~~~p~~g~f~~~~l~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ri~~ 370 (405)
T PRK09148 291 AEMRELYKKRRDVLVESFGRAGWDIPPPAASMFAWAPIPEAFRHLGSLEFSKLLVEKADVAVAPGVGFGEHGDGYVRIAL 370 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCccCCCCeeEEEEEECCCccCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEe
Confidence 6667777888999999999887643333344555555543 12232 1222211 136899988
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHHH
Q 011842 428 MPNVTIDKLDDFLNELIENRSTWY 451 (476)
Q Consensus 428 ~~~~T~edid~~~~~l~~~~~~~~ 451 (476)
. .+.+.++..++.|.+..+.+-
T Consensus 371 ~--~~~~~l~~al~~l~~~l~~~~ 392 (405)
T PRK09148 371 V--ENEQRIRQAARNIKRFLSSAD 392 (405)
T ss_pred c--CCHHHHHHHHHHHHHHHHHHH
Confidence 5 467888888888877766543
No 115
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.88 E-value=3.1e-20 Score=190.41 Aligned_cols=287 Identities=14% Similarity=0.086 Sum_probs=195.8
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCC
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLI 215 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~ 215 (476)
+..++.+++.+++++++|.+. .+++++|+++++.++.+... |++.|+++.+.|.++..++++.|+++..++
T Consensus 75 g~~~l~~~l~~~l~~~~g~~~----~i~~~sG~~a~~~a~~~~~~--~gd~vi~~~~~~~~~~~~~~~~g~~~~~~~--- 145 (385)
T TIGR01825 75 GTLRLHEELEEKLAKFKKTEA----ALVFQSGFNTNQGVLSALLR--KGDIVLSDELNHASIIDGLRLTKATKKIYK--- 145 (385)
T ss_pred CCcHHHHHHHHHHHHHhCCCc----EEEECcHHHHHHHHHHHhCC--CCCEEEEEccccHHHHHHHHhcCCceEEeC---
Confidence 345888999999999998642 34445558899988877765 899999999999999988888898877664
Q ss_pred CCccCHHHHHHHHHcCC-CCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccc-ccc-CCCC
Q 011842 216 SGEIDCADFKAKLLQNK-DKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPF-VKK-APKV 292 (476)
Q Consensus 216 ~g~~D~~~Le~~l~~~~-~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~-~~~-~~~~ 292 (476)
.+|++++++.+.+.. .+..+|+++...+++|.+.|+++|.++|++||+ |+++|++|+.+.++. ... ...+
T Consensus 146 --~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~tG~~~~~~~i~~l~~~~~~-----~li~De~~~~~~~~~~~~~~~~~~ 218 (385)
T TIGR01825 146 --HADMDDLDRVLRENPSYGKKLIVTDGVFSMDGDVAPLPEIVELAERYGA-----VTYVDDAHGSGVMGEAGRGTVHHF 218 (385)
T ss_pred --CCCHHHHHHHHHhhccCCCeEEEEecCCcCCCCccCHHHHHHHHHHhCC-----EEEEECcccccCcCCCCCccHhhc
Confidence 468999999887542 234577777778999999999999999999999 999999997654431 110 0112
Q ss_pred CCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCC-ccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHH
Q 011842 293 SFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSN-VEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQ 371 (476)
Q Consensus 293 ~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~-~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~ 371 (476)
......|++..+++|+++. ..|+++.+++.++.+... ..|.. .+..+.....++.++++.+.. ..+..+
T Consensus 219 ~~~~~~~i~~~s~sK~~~~--~gG~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~a~~~al~~~~~--~~~~~~ 288 (385)
T TIGR01825 219 GLEDKVDIQVGTLSKAIGV--VGGYAAGHKELIEYLKNRARPFLF------STAQPPAVVAALAAAVDELQR--SPELME 288 (385)
T ss_pred CCCcCCcEEEEeccHHhhc--CCCEEecCHHHHHHHHHhCccccc------cCCCCHHHHHHHHHHHHHHhc--CHHHHH
Confidence 2223478889999999974 348888887776655322 12321 111111112233334443311 235677
Q ss_pred HHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecCC---cHHHh-----hceeecc--------cCCEEEEEEcCCCCHHH
Q 011842 372 KCLRNAHYLKDRLLDAGISAMLNELSSTVVFERPQ---DEEFV-----RRWQLAC--------QGNIAHVVVMPNVTIDK 435 (476)
Q Consensus 372 ~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~---~~~~~-----~~~~l~~--------~~~~lRv~~~~~~T~ed 435 (476)
+..++++++.+.|++.|+... .+..+++.+..+. ..++. +++.+.. ....+|++++..+|+++
T Consensus 289 ~~~~~~~~l~~~L~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~L~~~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~e~ 367 (385)
T TIGR01825 289 RLWDNTRFFKAGLGKLGYDTG-GSETPITPVVIGDEKAAQEFSRRLFDEGIFAQSIVFPTVPRGTARIRNIPTAEHTKDD 367 (385)
T ss_pred HHHHHHHHHHHHHHHcCCCCC-CCCCCEEEEEECCHHHHHHHHHHHHHCCcEEcccCCCCCCCCCceEEEEEcCCCCHHH
Confidence 778899999999998876543 3434455554432 12222 2333321 22678999998999999
Q ss_pred HHHHHHHHHHHHHH
Q 011842 436 LDDFLNELIENRST 449 (476)
Q Consensus 436 id~~~~~l~~~~~~ 449 (476)
|++++++|+++.+.
T Consensus 368 i~~~~~~l~~~~~~ 381 (385)
T TIGR01825 368 LDQALDAYEKVGKE 381 (385)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999988754
No 116
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.88 E-value=2.4e-20 Score=191.54 Aligned_cols=289 Identities=12% Similarity=0.040 Sum_probs=200.6
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcc-cEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCC
Q 011842 136 HSRQFEVGVLDWFARLWELENNEY-WGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCL 214 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~-~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~ 214 (476)
+..++++++.+|+.+..|.+.+.. ++++|+|+++++..++.+... ||+.|++.+++|..+...++..|++++.+|++
T Consensus 69 G~~~lr~aia~~~~~~~g~~~~~~~~I~it~Gs~~al~~~~~~l~~--~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~ 146 (388)
T PRK07366 69 GTLDFREAAAQWYEQRFGLAVDPETEVLPLIGSQEGTAHLPLAVLN--PGDFALLLDPGYPSHAGGVYLAGGQIYPMPLR 146 (388)
T ss_pred CCHHHHHHHHHHHHHhhCCcCCCcCeEEECCCcHHHHHHHHHHhCC--CCCEEEEcCCCCcchHHHHHhcCCEEEEEECC
Confidence 456899999999988888654444 588999999999988887766 99999999999999999999999999999997
Q ss_pred CC--CccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCcccccccccc-c
Q 011842 215 IS--GEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVK-K 288 (476)
Q Consensus 215 ~~--g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~-~ 288 (476)
++ ..+|++++++.+.++++ ++++++++|+||.+-+ +++|+++|++||+ ||++|++|.-+.+.... .
T Consensus 147 ~~~~~~~d~~~l~~~~~~~~k---~i~l~~p~NPTG~~~s~~~~~~l~~~a~~~~~-----~ii~De~Y~~~~~~~~~~~ 218 (388)
T PRK07366 147 AENDFLPVFADIPTEVLAQAR---LMVLSYPHNPTTAIAPLSFFQEAVAFCQQHDL-----VLVHDFPYVDLVFDGEVEP 218 (388)
T ss_pred CccCCCCCHHHHHHhhcccce---EEEEeCCCCCCCccCCHHHHHHHHHHHHHcCe-----EEEEecchhhcccCCCCCC
Confidence 54 45788898887755443 7778889999999955 6778889999999 99999999876543211 1
Q ss_pred CCCCCCcc-c-ccEEEEcCCCCC-CCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHh--Ch
Q 011842 289 APKVSFKK-P-IGSVSVSGHKFV-GCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRK--GY 363 (476)
Q Consensus 289 ~~~~~~~~-~-~Dsi~~s~hK~l-~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~--g~ 363 (476)
.+...... . .-+++.|+.|.+ ..++++|+++.++++++.+.....+... +. ...+ +.+++..+ ..
T Consensus 219 ~~~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~~li~~l~~~~~~~~~-------~~--~~~~-~~~a~~~l~~~~ 288 (388)
T PRK07366 219 PSILQADPEKSVSIEFFTLSKSYNMGGFRIGFAIGNAQLIQALRQVKAVVDF-------NQ--YRGI-LNGAIAALTGPQ 288 (388)
T ss_pred CChhhCCCCcccEEEEeecccccCCcchhheehcCCHHHHHHHHHHHhhccc-------CC--CHHH-HHHHHHHHhCcH
Confidence 11122211 1 234567899988 5889999999988877665432222110 01 0111 11222222 13
Q ss_pred hcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecCC-----cHHHh----h--ceeecc-------cCCEEEE
Q 011842 364 KGFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERPQ-----DEEFV----R--RWQLAC-------QGNIAHV 425 (476)
Q Consensus 364 ~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~-----~~~~~----~--~~~l~~-------~~~~lRv 425 (476)
+.+++..+...++++++.+.|++.|+....+..++.+.+..++ +.++. + +..+.. ..+++|+
T Consensus 289 ~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi 368 (388)
T PRK07366 289 ATVQQTVQIFRQRRDAFINALHQIGWPVPLPEATMYVWAKLPEPWQGNSVEFCTQLVAQTGVAASPGSGFGKSGEGYVRF 368 (388)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCeeEEEEEECCcccCCCHHHHHHHHHHhCCEEEeCchHhCcCCCCeEEE
Confidence 4466777888889999999999887643344556666666553 22222 2 232311 1368999
Q ss_pred EEcCCCCHHHHHHHHHHHHHH
Q 011842 426 VVMPNVTIDKLDDFLNELIEN 446 (476)
Q Consensus 426 ~~~~~~T~edid~~~~~l~~~ 446 (476)
++. .+.++++..++.|.+.
T Consensus 369 ~~~--~~~~~l~~~l~rl~~~ 387 (388)
T PRK07366 369 ALV--HDPDILEEAVERIAAF 387 (388)
T ss_pred Eec--CCHHHHHHHHHHHHHh
Confidence 986 3688888888887653
No 117
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.88 E-value=3.5e-20 Score=187.83 Aligned_cols=272 Identities=12% Similarity=0.022 Sum_probs=193.7
Q ss_pred HHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccCHHHH
Q 011842 145 LDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCADF 224 (476)
Q Consensus 145 ~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~~~L 224 (476)
++.++++++++++ .+++|+|+++++..++.+..+ ||+.|+++.++|..+...++..|++++.++.++++.+|++++
T Consensus 65 r~~ia~~~~~~~~--~i~it~G~~~~l~~~~~~l~~--~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l 140 (351)
T PRK14807 65 REELARYCSVVPT--NIFVGNGSDEIIHLIMLAFIN--KGDVVIYPHPSFAMYSVYSKIAGAVEIPVKLKEDYTYDVGSF 140 (351)
T ss_pred HHHHHHHhCCCcc--cEEEecCHHHHHHHHHHHhcC--CCCEEEEeCCChHHHHHHHHHcCCeEEEeecCCCCCCCHHHH
Confidence 3445555677653 489999999998888777655 899999999999988888999999999999987788999999
Q ss_pred HHHHHc-CCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCcccccEEEE
Q 011842 225 KAKLLQ-NKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKPIGSVSV 303 (476)
Q Consensus 225 e~~l~~-~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~~Dsi~~ 303 (476)
++++.+ +++ +|++++++|+||.+-+.+++.+++++++. ++++|++|+.+. . ....+.++..+ -.++..
T Consensus 141 ~~~~~~~~~k---~v~l~~p~NPtG~~~~~~~l~~l~~~~~~-----~~ivDe~y~~~~-~-~~~~~~~~~~~-~vi~~~ 209 (351)
T PRK14807 141 IKVIEKYQPK---LVFLCNPNNPTGSVIEREDIIKIIEKSRG-----IVVVDEAYFEFY-G-NTIVDVINEFE-NLIVLR 209 (351)
T ss_pred HHHhhccCCC---EEEEeCCCCCCCCCCCHHHHHHHHHhCCC-----EEEEeCcchhhc-c-cchHHHhhhCC-CEEEEe
Confidence 999975 444 77778999999999999999999999888 999999997542 1 11111111111 236668
Q ss_pred cCCCCCC-CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHH
Q 011842 304 SGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKD 382 (476)
Q Consensus 304 s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~ 382 (476)
|++|.++ .++++|+++.+.++++.+....... . ...+.+.++...+....+++.+++..++++++.+
T Consensus 210 S~SK~~~~~GlRiG~~v~~~~~~~~~~~~~~~~-------~-----~~~~~q~~~~~~l~~~~~~~~~~~~~~~r~~l~~ 277 (351)
T PRK14807 210 TLSKAFGLAGLRVGYAVANENILKYLNLVKSPY-------N-----INSLSQVIALKVLRTGVLKERVNYILNERERLIK 277 (351)
T ss_pred cchHhcccchhceeeeecCHHHHHHHHHccCCC-------C-----cCHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 8899886 8899999999887776653221110 0 1234455555555434467777778888888999
Q ss_pred HHHhcCCeEeecCCeeEEEEecCCcHHHh-----hceeec-c-----cCCEEEEEEcCCCCHHHHHHHHHHHHHH
Q 011842 383 RLLDAGISAMLNELSSTVVFERPQDEEFV-----RRWQLA-C-----QGNIAHVVVMPNVTIDKLDDFLNELIEN 446 (476)
Q Consensus 383 ~L~~~g~~~~~~~~~~iv~f~~~~~~~~~-----~~~~l~-~-----~~~~lRv~~~~~~T~edid~~~~~l~~~ 446 (476)
.|++.+...+.++.++.+.+..++...+. ++..+. . ..+.+|+++. +.++.++|+++|+++
T Consensus 278 ~l~~~~g~~~~~~~~~~~~i~~~~~~~~~~~l~~~gV~v~~~~~~~~~~~~iRis~~---~~~~~~~l~~~l~~~ 349 (351)
T PRK14807 278 ELSKIPGIKVYPSKTNFILVKFKDADYVYQGLLERGILVRDFSKVEGLEGALRITVS---SCEANDYLINGLKEL 349 (351)
T ss_pred HHHhCCCcEECcCCccEEEEEcCCHHHHHHHHHHCCEEEEECCCCCCCCCeEEEEcC---CHHHHHHHHHHHHHh
Confidence 99875323445556666666665543332 223331 1 1367999875 688999999999765
No 118
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.88 E-value=4.3e-20 Score=190.90 Aligned_cols=299 Identities=14% Similarity=-0.005 Sum_probs=201.1
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCC-
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCL- 214 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~- 214 (476)
+..++++++.+|+.+..|++.++.++++|+|+++++..++.+..+ ||+.|++++++|..+...++..|++++.++++
T Consensus 75 G~~~lr~aia~~~~~~~g~~~~~~~I~it~G~~~al~~~~~~l~~--~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~ 152 (409)
T PLN00143 75 GILPARRAIADYLSNDLPYQLSPDDVYLTLGCKHAAEIIIKVLAR--PEANILLPRPGFPDVETYAIFHHLEIRHFDLLP 152 (409)
T ss_pred CCHHHHHHHHHHHHhhcCCCCCHhhEEEecChHHHHHHHHHHHcC--CCCEEEEcCCCCcCHHHHHHHcCCEEEEEeccC
Confidence 456899999999988877665556799999999999999888776 99999999999999999999999999999985
Q ss_pred -CCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCcccccccccccCC
Q 011842 215 -ISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAP 290 (476)
Q Consensus 215 -~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~ 290 (476)
.++.+|+++|++++.++++ ++++++|+|+||.+-+ +++|+++|++|++ +|++|++|..+.+......+
T Consensus 153 ~~~~~~d~~~l~~~~~~~~~---~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~-----~ii~De~Y~~l~~~~~~~~~ 224 (409)
T PLN00143 153 EKGWEVDLDAVEAIADENTI---AMVIINPGNPCGSVYSYEHLNKIAETARKLGI-----LVIADEVYGHIVFGSKPFVP 224 (409)
T ss_pred CCCCcCCHHHHHHhcccCCE---EEEEECCCCCCCCccCHHHHHHHHHHHHHcCC-----eEEEEccccccccCCCCCcc
Confidence 3457999999998865543 6777789999999976 7888899999999 99999999876553211111
Q ss_pred CCCCccc-ccEEEEcCCCC-CCCCCCceeEEee-h-hhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhC---h
Q 011842 291 KVSFKKP-IGSVSVSGHKF-VGCPMPCGVQITR-M-EHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKG---Y 363 (476)
Q Consensus 291 ~~~~~~~-~Dsi~~s~hK~-l~~p~~~G~l~~~-~-~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g---~ 363 (476)
...+... --++..|+.|. +..++++||+++. + .+++.+.....+....... .++ ..+.+.++...+. .
T Consensus 225 ~~~~~~~~~vi~~~SfSK~f~~pGlRvG~~v~~~p~~~~~~~~~~~~~~~~~~~~-~~~----~~~~q~a~~~~l~~~~~ 299 (409)
T PLN00143 225 MGLFASIVPVITLGSISKRWMIPGWGLGWLVTCDPSGLLQICEIADSIKKALNPA-PFP----PTFIQAAIPEILEKTTE 299 (409)
T ss_pred hhhhcccCcEEEEccchhhcCCCccceEEEEeeCchhhhhhHHHHHHHHHHHhcc-CCC----CchHHHHHHHHHhcChH
Confidence 1111111 12456677887 7889999999984 3 2221110000000000000 011 1233444444332 2
Q ss_pred hcHHHHHHHHHHHHHHHHHHHHhcCCeEe-ecC-CeeEEEEecCC--------cHHHh----h--ceee-cc----cCCE
Q 011842 364 KGFQKEVQKCLRNAHYLKDRLLDAGISAM-LNE-LSSTVVFERPQ--------DEEFV----R--RWQL-AC----QGNI 422 (476)
Q Consensus 364 ~g~~~~~~~~~~~a~~l~~~L~~~g~~~~-~~~-~~~iv~f~~~~--------~~~~~----~--~~~l-~~----~~~~ 422 (476)
.-+++.+++..+..+++.+.|++.+.... ..| .++.+.++.+. +.++. . +..+ +. ..++
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~p~gg~f~w~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~ 379 (409)
T PLN00143 300 DFFSKTINILRAALAFCYDKLKEIPCIMCPQKAEGAFFALVKLNLLLLEDIEDDMEFCLKLAKEESLIILPGVTVGLKNW 379 (409)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCeeEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEeCccccCCCCe
Confidence 34677788888888889999988764332 233 45666666541 22332 1 2222 21 2468
Q ss_pred EEEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 011842 423 AHVVVMPNVTIDKLDDFLNELIENRSTWY 451 (476)
Q Consensus 423 lRv~~~~~~T~edid~~~~~l~~~~~~~~ 451 (476)
+|+++. ++.++++.-++.|.+..+...
T Consensus 380 iRi~~~--~~~~~l~~al~rl~~~l~~~~ 406 (409)
T PLN00143 380 LRITFA--VEQSSLEDGLGRLKSFCGRHA 406 (409)
T ss_pred EEEEEc--CCHHHHHHHHHHHHHHHHHhc
Confidence 999987 468999999998888776543
No 119
>PRK07337 aminotransferase; Validated
Probab=99.88 E-value=5.6e-20 Score=188.84 Aligned_cols=285 Identities=12% Similarity=0.048 Sum_probs=199.1
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCC
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLI 215 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~ 215 (476)
+..++++++.+|+.+..|.+.++.++++|+|+++|+..++.+..+ +|+.|++++++|.++...++..|++++.+|++.
T Consensus 68 g~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~--~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~ 145 (388)
T PRK07337 68 GLAPLREAIAAWYARRFGLDVAPERIVVTAGASAALLLACLALVE--RGDEVLMPDPSYPCNRHFVAAAEGRPVLVPSGP 145 (388)
T ss_pred CCHHHHHHHHHHHHHHhCCCCChHhEEEecCcHHHHHHHHHHhcC--CCCEEEEeCCCchhhHHHHHHcCCEEEEeecCC
Confidence 467999999999998888754445699999999999888877655 899999999999999999999999999999874
Q ss_pred --CCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCcccccccccccCC
Q 011842 216 --SGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAP 290 (476)
Q Consensus 216 --~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~ 290 (476)
++.+|+++|++.+.++++ +|++++++|+||.+.+ +++|+++|+++++ |+++|++|..+.+.. ...+
T Consensus 146 ~~~~~~~~~~l~~~~~~~~~---~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~~-----~ii~De~y~~~~~~~-~~~~ 216 (388)
T PRK07337 146 AERFQLTAADVEAAWGERTR---GVLLASPSNPTGTSIAPDELRRIVEAVRARGG-----FTIVDEIYQGLSYDA-APVS 216 (388)
T ss_pred ccCCcCCHHHHHhhcCccce---EEEEECCCCCCCcCcCHHHHHHHHHHHHHCCC-----EEEEeccccccccCC-CCcC
Confidence 468999999998876554 6777889999999765 7889999999999 999999997654321 1111
Q ss_pred CCCCcccccEE-EEcCCCCC-CCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhCh---hc
Q 011842 291 KVSFKKPIGSV-SVSGHKFV-GCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGY---KG 365 (476)
Q Consensus 291 ~~~~~~~~Dsi-~~s~hK~l-~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~---~g 365 (476)
.... ..+++ ..|++|.+ ..++++|++++++++++.+.....+.. .+. ..+.++++...+.. ..
T Consensus 217 ~~~~--~~~vi~~~S~SK~~~~~G~RiG~~~~~~~l~~~l~~~~~~~~-------~~~---s~~~q~~~~~~l~~~~~~~ 284 (388)
T PRK07337 217 ALSL--GDDVITINSFSKYFNMTGWRLGWLVVPEALVGTFEKLAQNLF-------ICA---SALAQHAALACFEPDTLAI 284 (388)
T ss_pred hhhc--cCCEEEEEechhhcCCchhheeeeecCHHHHHHHHHHHHHhc-------cCC---ChHHHHHHHHHhccCchHH
Confidence 1111 12444 45889988 478899999999887665533222211 011 12344444444422 23
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCeEe-ecCCeeEEEEecC--------CcHHHh------hceeecc--------cCCE
Q 011842 366 FQKEVQKCLRNAHYLKDRLLDAGISAM-LNELSSTVVFERP--------QDEEFV------RRWQLAC--------QGNI 422 (476)
Q Consensus 366 ~~~~~~~~~~~a~~l~~~L~~~g~~~~-~~~~~~iv~f~~~--------~~~~~~------~~~~l~~--------~~~~ 422 (476)
+++..++..++++++.+.|++.++... .+..++.+.+..+ ++.++. +++.+.. ..++
T Consensus 285 ~~~~~~~~~~~r~~~~~~L~~~~~~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~ 364 (388)
T PRK07337 285 YERRRAEFKRRRDFIVPALESLGFKVPVMPDGAFYVYADCRGVAHPAAGDSAALTQAMLHDAGVVLVPGRDFGPHAPRDY 364 (388)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCccccCCCeeEEEEEecccccCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCCE
Confidence 556667778888999999998876543 3444555555543 122322 2333321 2368
Q ss_pred EEEEEcCCCCHHHHHHHHHHHHH
Q 011842 423 AHVVVMPNVTIDKLDDFLNELIE 445 (476)
Q Consensus 423 lRv~~~~~~T~edid~~~~~l~~ 445 (476)
+|+++.. +.++++..++.|.+
T Consensus 365 ~Ri~~~~--~~~~l~~~l~rl~~ 385 (388)
T PRK07337 365 IRLSYAT--SMSRLEEAVARLGK 385 (388)
T ss_pred EEEEecC--CHHHHHHHHHHHHH
Confidence 9999974 57777777666654
No 120
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.88 E-value=9.1e-20 Score=187.04 Aligned_cols=288 Identities=12% Similarity=0.038 Sum_probs=199.9
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCC-
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCL- 214 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~- 214 (476)
+..++++++++++.+..|+..++.++++|+|+++|+..++.+... |++.|+++.++|..+..+++.+|++++.+|.+
T Consensus 67 G~~~lr~~ia~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~--~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~ 144 (384)
T PRK06348 67 GDVELIEEIIKYYSKNYDLSFKRNEIMATVGACHGMYLALQSILD--PGDEVIIHEPYFTPYKDQIEMVGGKPIILETYE 144 (384)
T ss_pred CcHHHHHHHHHHHHHHhCCCCChhhEEEcCChHHHHHHHHHHhcC--CCCEEEEeCCCCcchHHHHHHcCCEEEEecCCc
Confidence 456899999999988877765556799999999999998888765 89999999999999999999999999999874
Q ss_pred -CCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCcccccccccccCC
Q 011842 215 -ISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAP 290 (476)
Q Consensus 215 -~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~ 290 (476)
.++.+|+++|++.+.++++ +|++++++|+||.+-+ +++|+++|++|++ +|++|++|+.+.+.. ...+
T Consensus 145 ~~~~~~d~~~l~~~~~~~~~---~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~-----~ii~De~y~~~~~~~-~~~~ 215 (384)
T PRK06348 145 EDGFQINVKKLEALITSKTK---AIILNSPNNPTGAVFSKETLEEIAKIAIEYDL-----FIISDEVYDGFSFYE-DFVP 215 (384)
T ss_pred CcCCcCCHHHHHHhhCcCcc---EEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCe-----EEEEecccccceeCC-Cccc
Confidence 2456999999998865544 6677789999999864 7889999999999 999999998765432 2211
Q ss_pred CCCCc--ccccEEEEcCCCCCC-CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhC--hhc
Q 011842 291 KVSFK--KPIGSVSVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKG--YKG 365 (476)
Q Consensus 291 ~~~~~--~~~Dsi~~s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g--~~g 365 (476)
...+. ..-.++..|+.|.++ .++++|++++++++++.+.....+. ..+. ..+.+.++...+. .+-
T Consensus 216 ~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~v~~~~~~~~~~~~~~~~-------~~~~---~~~~q~~~~~~l~~~~~~ 285 (384)
T PRK06348 216 MATLAGMPERTITFGSFSKDFAMTGWRIGYVIAPDYIIETAKIINEGI-------CFSA---PTISQRAAIYALKHRDTI 285 (384)
T ss_pred hhhcCCCcCcEEEEecchhccCCccccceeeecCHHHHHHHHHHHHhc-------cCCC---CHHHHHHHHHHHhCcHHH
Confidence 11221 112356678899887 8899999999887765543222111 0111 1233333333332 223
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEE-EEecC----CcHHHh----h--ceeec-------ccCCEEEEEE
Q 011842 366 FQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTV-VFERP----QDEEFV----R--RWQLA-------CQGNIAHVVV 427 (476)
Q Consensus 366 ~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv-~f~~~----~~~~~~----~--~~~l~-------~~~~~lRv~~ 427 (476)
.++..+...++++++.+.|++.+...+.++..+.+ .+..+ ++.++. + ++.+. ...+.+|+++
T Consensus 286 ~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p~gg~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~ 365 (384)
T PRK06348 286 VPLIKEEFQKRLEYAYKRIESIPNLSLHPPKGSIYAFINIKKTGLSSVEFCEKLLKEAHVLVIPGKAFGESGEGYIRLAC 365 (384)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCceeccCCeeEEEEEecccCCCCHHHHHHHHHHhCCEEEcCchhhccCCCCeEEEEe
Confidence 45566677778888999998864334445555444 34443 122222 2 23332 1236899998
Q ss_pred cCCCCHHHHHHHHHHHHHH
Q 011842 428 MPNVTIDKLDDFLNELIEN 446 (476)
Q Consensus 428 ~~~~T~edid~~~~~l~~~ 446 (476)
. .+.++++..++.|+++
T Consensus 366 ~--~~~~~l~~al~~l~~~ 382 (384)
T PRK06348 366 T--VGIEVLEEAFNRIEKM 382 (384)
T ss_pred c--CCHHHHHHHHHHHHhh
Confidence 5 5788888888877654
No 121
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.88 E-value=3.3e-20 Score=188.02 Aligned_cols=274 Identities=15% Similarity=0.069 Sum_probs=193.8
Q ss_pred HHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccCHH
Q 011842 143 GVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCA 222 (476)
Q Consensus 143 ~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~~ 222 (476)
++++.++++++++++ .+++|+|+++++..++.+..+ ||+.|++++++|..+...++..|++++.+|.++++.+|++
T Consensus 64 ~lr~aia~~~~~~~~--~I~it~G~~~al~~~~~~l~~--~gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~ 139 (353)
T PRK05387 64 ALRQAIAAYYGLDPE--QVFVGNGSDEVLAHAFLAFFN--HDRPLLFPDITYSFYPVYAGLYGIPYEEIPLDDDFSIDVE 139 (353)
T ss_pred HHHHHHHHHhCCCHH--HEEEcCCHHHHHHHHHHHhcC--CCCEEEEeCCCHHHHHHHHHHcCCEEEEeecCCCCCCCHH
Confidence 344445666677653 599999999999999888766 9999999999998888889999999999999888899999
Q ss_pred HHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHh-CCCCCceEEEEecCcccccccccccCCCCCCcccccEE
Q 011842 223 DFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEES-GFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKPIGSV 301 (476)
Q Consensus 223 ~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~-g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~~Dsi 301 (476)
+|++ .++ +|++++++|+||.+.+.+++.++++.+ ++ ++++|++|+.+... ...+..+.. .-.++
T Consensus 140 ~l~~----~~~---~v~~~~P~NPtG~~~~~~~~~~l~~~~~~~-----~livDe~y~~~~~~--~~~~~~~~~-~~~i~ 204 (353)
T PRK05387 140 DYLR----PNG---GIIFPNPNAPTGIALPLAEIERILAANPDS-----VVVIDEAYVDFGGE--SAIPLIDRY-PNLLV 204 (353)
T ss_pred HHHh----cCC---EEEEeCCCCCCCCCCCHHHHHHHHHhCCCc-----EEEEeCcccccCCc--chHHHHhhC-CCEEE
Confidence 9863 232 677889999999999999999999876 88 99999999643211 111111111 13578
Q ss_pred EEcCCCCCC-CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhCh-hcHHHHHHHHHHHHHH
Q 011842 302 SVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGY-KGFQKEVQKCLRNAHY 379 (476)
Q Consensus 302 ~~s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~-~g~~~~~~~~~~~a~~ 379 (476)
+.|++|.++ .++++|+++.++++++.+........ ..+ ...+.++++...+.. +.+++..++..+++++
T Consensus 205 ~~S~SK~~~~~GlR~G~~~~~~~~~~~l~~~~~~~~------~~~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 275 (353)
T PRK05387 205 VQTFSKSRSLAGLRVGFAIGHPELIEALNRVKNSFN------SYP---LDRLAQAGAIAAIEDEAYFEETRAKVIATRER 275 (353)
T ss_pred EEehhHhhcchhhhceeeecCHHHHHHHHHhhccCC------CCC---cCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 889999886 77999999998877665532211110 011 113444444444432 3466778888889999
Q ss_pred HHHHHHhcCCeEeecCCeeEEEEecCC--cHHHhh-----ceee-----cccCCEEEEEEcCCCCHHHHHHHHHHHHHHH
Q 011842 380 LKDRLLDAGISAMLNELSSTVVFERPQ--DEEFVR-----RWQL-----ACQGNIAHVVVMPNVTIDKLDDFLNELIENR 447 (476)
Q Consensus 380 l~~~L~~~g~~~~~~~~~~iv~f~~~~--~~~~~~-----~~~l-----~~~~~~lRv~~~~~~T~edid~~~~~l~~~~ 447 (476)
+.+.|++.|+. +.++.++++++..++ ..++.+ ++.+ +...+.+|++++ +.+++++++++|+++.
T Consensus 276 l~~~L~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~iRis~~---~~~~~~~~~~~L~~~~ 351 (353)
T PRK05387 276 LVEELEALGFE-VLPSKANFVFARHPSHDAAELAAKLRERGIIVRHFNKPRIDQFLRITIG---TDEEMEALVDALKEIL 351 (353)
T ss_pred HHHHHHHCCCe-ECCCcCcEEEEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCeEEEEeC---CHHHHHHHHHHHHHHh
Confidence 99999998864 445566676666553 233322 3333 112468999885 6799999999998865
Q ss_pred H
Q 011842 448 S 448 (476)
Q Consensus 448 ~ 448 (476)
.
T Consensus 352 ~ 352 (353)
T PRK05387 352 A 352 (353)
T ss_pred h
Confidence 3
No 122
>PRK07550 hypothetical protein; Provisional
Probab=99.88 E-value=8.7e-20 Score=187.30 Aligned_cols=290 Identities=10% Similarity=-0.039 Sum_probs=199.0
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCC
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLI 215 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~ 215 (476)
+..++++++.+++.+..|...+...+++|+|+++|+..++.+... ||+.|+++++.|..+...++..|++++.++.++
T Consensus 68 G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~--~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~ 145 (386)
T PRK07550 68 GLPELREAYAAHYSRLYGAAISPEQVHITSGCNQAFWAAMVTLAG--AGDEVILPLPWYFNHKMWLDMLGIRPVYLPCDE 145 (386)
T ss_pred CCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhcC--CCCEEEEcCCCCcchHHHHHhcCCEEEEEecCC
Confidence 567999999999999888764455699999999999888877765 899999999999988888899999999999974
Q ss_pred --CCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCcccccccccccCC
Q 011842 216 --SGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAP 290 (476)
Q Consensus 216 --~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~ 290 (476)
++.+|+++|++.++++++ +|++++++++||.+-+ +++|+++|++||+ ++++|++|+.+........+
T Consensus 146 ~~~~~~~~~~l~~~~~~~~~---~v~~~~P~NPtG~~~~~~~~~~i~~~~~~~~~-----~iI~Dd~y~~~~~~~~~~~~ 217 (386)
T PRK07550 146 GPGLLPDPAAAEALITPRTR---AIALVTPNNPTGVVYPPELLHELYDLARRHGI-----ALILDETYRDFDSGGGAPHD 217 (386)
T ss_pred CcCCCCCHHHHHHHhcccCc---EEEEeCCCCCCCcccCHHHHHHHHHHHHHcCe-----EEEEeccchhhccCCCCCcc
Confidence 356899999999976554 6667779999998865 8899999999999 99999999765322111111
Q ss_pred CCCCcc-c-ccEEEEcCCCCCC-CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhC--hhc
Q 011842 291 KVSFKK-P-IGSVSVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKG--YKG 365 (476)
Q Consensus 291 ~~~~~~-~-~Dsi~~s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g--~~g 365 (476)
.+.... . -.++..|++|.++ .++++|+++++++.++.+.....+. +...+ .+.++++...+. .+.
T Consensus 218 ~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~~-----~~~~s-----~~~q~~~~~~l~~~~~~ 287 (386)
T PRK07550 218 LFADPDWDDTLVHLYSFSKSYALTGHRVGAVVASPARIAEIEKFMDTV-----AICAP-----RIGQIAVAWGLPNLADW 287 (386)
T ss_pred hhhCCCccccEEEEecchhhccCcccceEeeecCHHHHHHHHHHHhhc-----ccCCC-----cHHHHHHHHHhccHHHH
Confidence 111111 1 1345778999886 7899999999887665543211111 11111 233333333332 122
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecCC----cHHHh----h--ceeecc-------cCCEEEEEEc
Q 011842 366 FQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERPQ----DEEFV----R--RWQLAC-------QGNIAHVVVM 428 (476)
Q Consensus 366 ~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~----~~~~~----~--~~~l~~-------~~~~lRv~~~ 428 (476)
.++..+++.++++++.+.|+..+...+.+...+.+.+..+. ..++. + ++.+.. ..+++|+++.
T Consensus 288 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~ 367 (386)
T PRK07550 288 RAGNRAEIARRRDAFRAVFARLPGWELLASGAYFAYVRHPFPDRPSREVARRLAKEAGILCLPGTMFGPGQEGYLRLAFA 367 (386)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCceeCCCceEEEEecCCCCCCCHHHHHHHHHHhcCEEEeCchhhCCCCCCEEEEEee
Confidence 34455667778888999998863223334445555555442 23322 2 333321 2468999985
Q ss_pred CCCCHHHHHHHHHHHHHH
Q 011842 429 PNVTIDKLDDFLNELIEN 446 (476)
Q Consensus 429 ~~~T~edid~~~~~l~~~ 446 (476)
..+++++++.++.|.+.
T Consensus 368 -~~~~~~~~~~~~~l~~~ 384 (386)
T PRK07550 368 -NADVAGIGELVERLRAF 384 (386)
T ss_pred -cCCHHHHHHHHHHHHhh
Confidence 35689999999888653
No 123
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.88 E-value=4.4e-20 Score=187.44 Aligned_cols=273 Identities=13% Similarity=0.016 Sum_probs=193.2
Q ss_pred HHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccCHHH
Q 011842 144 VLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCAD 223 (476)
Q Consensus 144 ~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~~~ 223 (476)
+++.+++++|.+.+ ..+++|+|+++++..++.+..+ ||+.|++++++|..+...++..|++++.+|+++++.+|++.
T Consensus 68 lr~~ia~~~~~~~~-~~I~~t~G~~~~i~~~~~~~~~--~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~d~~~ 144 (356)
T PRK04870 68 LKAALRAAMGVPAG-ADVLLGNGSDELIQLLALACAK--PGATVLAPEPGFVMYRMSAKLAGLEFVGVPLTADFTLDLPA 144 (356)
T ss_pred HHHHHHHHhCcCCC-CcEEEcCCHHHHHHHHHHHhcC--CCCEEEECCCCHHHHHHHHHHcCCEEEEecCCCCCCCCHHH
Confidence 33445556677532 2588999999998887777655 89999999999999999999999999999998788999999
Q ss_pred HHHHHHc-CCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCcccccEEE
Q 011842 224 FKAKLLQ-NKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKPIGSVS 302 (476)
Q Consensus 224 Le~~l~~-~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~~Dsi~ 302 (476)
|++++.. +++ +|+++++.|+||.+-+.+++.++++..+. ++++|++|..+... ...+.+.-.+ -..+.
T Consensus 145 l~~~~~~~~~~---~v~l~~p~NPtG~~~~~~~~~~i~~~~~~-----~ii~De~y~~~~~~--~~~~~~~~~~-~vi~~ 213 (356)
T PRK04870 145 MLAAIAEHRPA---LVFLAYPNNPTGNLFDDADVERIIEAAPG-----LVVVDEAYQPFAGD--SWLPRLARFP-NLLVM 213 (356)
T ss_pred HHHHhhcCCCC---EEEEcCCCCCCCCCCCHHHHHHHHHHCCC-----EEEEECCchhhcCc--chHHHHhhCC-CEEEE
Confidence 9999975 343 77778899999999999999998888788 99999999754321 1111111111 23567
Q ss_pred EcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhC-hhcHHHHHHHHHHHHHHHH
Q 011842 303 VSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKG-YKGFQKEVQKCLRNAHYLK 381 (476)
Q Consensus 303 ~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~ 381 (476)
.|++|++..++++|+++.++++++.+....... . ...+.+.++...+. .+.+++..++..++++++.
T Consensus 214 ~S~SK~~~~GlRiG~~i~~~~~i~~~~~~~~~~-------~-----~~~~~q~~a~~~l~~~~~~~~~~~~~~~~~~~l~ 281 (356)
T PRK04870 214 RTVSKLGLAGLRLGYLAGHPAWIAELDKVRPPY-------N-----VNVLTQATALFALEHVDVLDAQAAQLRAERTRLA 281 (356)
T ss_pred ecchhhhhHHHhhhhhhCCHHHHHHHHHccCCC-------c-----CCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 888998777899999999888776653321110 1 11233333333322 2336777788888999999
Q ss_pred HHHHhc-CCeEeecCCeeEEEEecCCcHHHhh-----ceeec-c------cCCEEEEEEcCCCCHHHHHHHHHHHHHH
Q 011842 382 DRLLDA-GISAMLNELSSTVVFERPQDEEFVR-----RWQLA-C------QGNIAHVVVMPNVTIDKLDDFLNELIEN 446 (476)
Q Consensus 382 ~~L~~~-g~~~~~~~~~~iv~f~~~~~~~~~~-----~~~l~-~------~~~~lRv~~~~~~T~edid~~~~~l~~~ 446 (476)
+.|++. ++ .+.++.++.+.+..+....+.+ ++.+. . ..+.+|+++. +.+++++|+++|+++
T Consensus 282 ~~L~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis~~---~~~~~~~l~~al~~~ 355 (356)
T PRK04870 282 AALAALPGV-TVFPSAANFILVRVPDAAAVFDGLKTRGVLVKNLSGMHPLLANCLRVTVG---TPEENAQFLAALKAA 355 (356)
T ss_pred HHHHhCCCc-EECCCCCeEEEEECCCHHHHHHHHHHCCEEEEECCCCCCCCCCeEEEeCC---CHHHHHHHHHHHHHh
Confidence 999887 54 4455666777777764333322 23331 1 1368999886 799999999999865
No 124
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.88 E-value=6.2e-20 Score=189.04 Aligned_cols=289 Identities=11% Similarity=0.039 Sum_probs=198.3
Q ss_pred hhHHHHHHHHHHHHHHcCCC-CCcc-cEEEcCCchhHHHHHHHHHHhhCC---CcEEEecCCCchHHHHHHHHcCCeEEE
Q 011842 136 HSRQFEVGVLDWFARLWELE-NNEY-WGYITNCGTEGNLHGILVGREVFP---DGILYASRESHYSVFKAARMYRMECVK 210 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~-~~~~-~g~~t~ggt~An~~al~aa~~~~p---~~~Vl~s~~~H~S~~~~~~~~G~~v~~ 210 (476)
+..++++++.+|+.+..|++ .++. .+++|+|+++++..++.+..+ | ++.|+++.+.|..+..+++.+|++++.
T Consensus 66 G~~~lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~--~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~ 143 (396)
T PRK09147 66 GLPALREAIAAWLERRYGLPALDPATQVLPVNGSREALFAFAQTVID--RDGPGPLVVCPNPFYQIYEGAALLAGAEPYF 143 (396)
T ss_pred CCHHHHHHHHHHHHHHhCCCcCCccceEEECCChHHHHHHHHHHHcC--CCCCCCEEEEcCCCccchHHHHHhcCCEEEE
Confidence 45689999999999888865 3332 588999999999988888776 7 889999999999999999999999999
Q ss_pred EeCCCC--CccCHHHHHHHHHcCCCCcEEEEEeeCCCcccccc---CHHHHHHHHHHhCCCCCceEEEEecCcccccccc
Q 011842 211 VDCLIS--GEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVD---DLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPF 285 (476)
Q Consensus 211 v~~~~~--g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id---~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~ 285 (476)
||++++ +.+|++.|++.+.++++ +++++++.|+||.+- .+++|+++|++|++ ||++|++|+.+.+..
T Consensus 144 vp~~~~~~~~~d~~~l~~~~~~~~k---~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~-----~ii~De~y~~~~~~~ 215 (396)
T PRK09147 144 LNCDPANNFAPDFDAVPAEVWARTQ---LLFVCSPGNPTGAVLPLDDWKKLFALSDRYGF-----VIASDECYSEIYFDE 215 (396)
T ss_pred eccCccccCccCHHHHHHHHhhccE---EEEEcCCCCCcCccCCHHHHHHHHHHHHHcCe-----EEEeeccccccccCC
Confidence 999743 57999999988865544 777789999999985 57888899999999 999999998765432
Q ss_pred cccC-CCCC----C--cc-cccEEEEcCCC-CCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHH
Q 011842 286 VKKA-PKVS----F--KK-PIGSVSVSGHK-FVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWY 356 (476)
Q Consensus 286 ~~~~-~~~~----~--~~-~~Dsi~~s~hK-~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~ 356 (476)
.... +.+. . .. .--++..|+.| ++++++++|+++.++++++.+.....+.. .+. ..+.+.+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~~~~~~l~~~~~~~~~~~~-------~~~---~~~~q~a 285 (396)
T PRK09147 216 AAPPLGLLEAAAELGRDDFKRLVVFHSLSKRSNVPGLRSGFVAGDAALLKKFLLYRTYHG-------CAM---PPAVQAA 285 (396)
T ss_pred CCCCchhhhhccccCccccccEEEEeccccccCCccceeeeecCCHHHHHHHHHHhhhcc-------cCC---CHHHHHH
Confidence 1010 0010 0 00 11256678889 56888999999998887766543222211 011 1233333
Q ss_pred HHHHhC-hhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecC-CcHHHhh------ceee-cc---------
Q 011842 357 TLNRKG-YKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERP-QDEEFVR------RWQL-AC--------- 418 (476)
Q Consensus 357 ~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~-~~~~~~~------~~~l-~~--------- 418 (476)
++..+. ...+++..+...++++.+.+.|++. +....++.++.+.+..+ .+.++.+ +..+ +.
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~p~~g~f~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~ 364 (396)
T PRK09147 286 SIAAWNDEAHVRENRALYREKFDAVTPILAPV-LDVQLPDAGFYLWAKVPGDDTEFARRLYADYNVTVLPGSYLAREAHG 364 (396)
T ss_pred HHHHhcchhHHHHHHHHHHHHHHHHHHHHHHh-cCCCCCCeeEEEEEECCCCHHHHHHHHHHhCCEEEeCCccccccccC
Confidence 333332 2345666777788888888888874 32223445566666665 3333321 3332 10
Q ss_pred ---cCCEEEEEEcCCCCHHHHHHHHHHHHHHH
Q 011842 419 ---QGNIAHVVVMPNVTIDKLDDFLNELIENR 447 (476)
Q Consensus 419 ---~~~~lRv~~~~~~T~edid~~~~~l~~~~ 447 (476)
..+++|+++.. ++++++..++.|.+..
T Consensus 365 ~~~~~~~iRi~~~~--~~~~l~~~l~rl~~~~ 394 (396)
T PRK09147 365 VNPGAGRVRIALVA--PLAECVEAAERIVDFC 394 (396)
T ss_pred CCCCCCeEEEEecC--CHHHHHHHHHHHHHHh
Confidence 13689998863 5778888888776654
No 125
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.88 E-value=1.2e-20 Score=190.77 Aligned_cols=272 Identities=16% Similarity=0.083 Sum_probs=191.9
Q ss_pred HHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccCHH
Q 011842 143 GVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCA 222 (476)
Q Consensus 143 ~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~~ 222 (476)
++++.+++++|++++ .+++|+|+++++..++.+... +++.|++++++|..+...++..|++++.+++++++.+|++
T Consensus 58 ~lr~~ia~~~~~~~~--~i~~~~G~~~~l~~~~~~l~~--~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~d~~ 133 (346)
T TIGR01141 58 ELKQALADYYGVDPE--QILLGNGSDEIIELLIRAFLE--PGDAVLVPPPTYSMYEISAKIHGAEVVKVPLDEDGQLDLE 133 (346)
T ss_pred HHHHHHHHHhCcChH--HEEEcCCHHHHHHHHHHHhcC--CCCEEEEcCCCHHHHHHHHHHcCCeEEEeccCCCCCCCHH
Confidence 344556777777643 489999999998777776654 8899999999998888888999999999999888889999
Q ss_pred HHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHh--CCCCCceEEEEecCcccccccccccCCCCCCcccccE
Q 011842 223 DFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEES--GFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKPIGS 300 (476)
Q Consensus 223 ~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~--g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~~Ds 300 (476)
.|++++.++++ +|++++++|++|.+.|++++.++++.+ ++ ++++|++|+.+.... ......... ..++
T Consensus 134 ~l~~~~~~~~~---~v~l~~p~NptG~~~~~~~~~~l~~~~~~~~-----~ii~D~~y~~~~~~~-~~~~~~~~~-~~~i 203 (346)
T TIGR01141 134 DILVAIDDKPK---LVFLCSPNNPTGNLLSRSDIEAVLERTPEDA-----LVVVDEAYGEFSGEP-STLPLLAEY-PNLI 203 (346)
T ss_pred HHHHhcCCCCC---EEEEeCCCCCCCCCCCHHHHHHHHHhCCCCc-----EEEEECchhhhcCCc-cHHHHHhhC-CCEE
Confidence 99998765554 778889999999999999999999987 88 999999997533210 110001101 1246
Q ss_pred EEEcCCCCCC-CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChh-cHHHHHHHHHHHHH
Q 011842 301 VSVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYK-GFQKEVQKCLRNAH 378 (476)
Q Consensus 301 i~~s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~-g~~~~~~~~~~~a~ 378 (476)
+..|++|+++ .++++|++++++++++.+...... ... ..+.+.++...+... .+.+..++..++++
T Consensus 204 ~~~S~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~-------~~~-----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 271 (346)
T TIGR01141 204 VLRTLSKAFGLAGLRIGYAIANAEIIDALNKVRAP-------FNL-----SRLAQAAAIAALRDDDFIEKTVEEINAERE 271 (346)
T ss_pred EEehhhHhhhchhhhceeeecCHHHHHHHHhccCC-------CCC-----CHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 6788899994 567899999988776655322111 111 123444444444322 36777888889999
Q ss_pred HHHHHHHhc-CCeEeecCCeeEEEEecCC-cHHHhh-----ceeec-cc-----CCEEEEEEcCCCCHHHHHHHHHHHH
Q 011842 379 YLKDRLLDA-GISAMLNELSSTVVFERPQ-DEEFVR-----RWQLA-CQ-----GNIAHVVVMPNVTIDKLDDFLNELI 444 (476)
Q Consensus 379 ~l~~~L~~~-g~~~~~~~~~~iv~f~~~~-~~~~~~-----~~~l~-~~-----~~~lRv~~~~~~T~edid~~~~~l~ 444 (476)
++.+.|++. |+. +.++.+.++.+..+. ..++.+ ++.+. .. .+.+|++++ |++|+++++++|+
T Consensus 272 ~l~~~L~~~~g~~-~~~~~g~~~~~~~~~~~~~~~~~L~~~gI~v~~g~~f~~~~~~iRls~~---~~~~i~~~~~~l~ 346 (346)
T TIGR01141 272 RLYDGLKKLPGLE-VYPSDANFVLIRFPRDADALFEALLEKGIIVRDLNSYPGLPNCLRITVG---TREENDRFLAALR 346 (346)
T ss_pred HHHHHHHhcCCCE-ECCCcCCEEEEecCCCHHHHHHHHHHCCeEEEeCCCcCCCCCeEEEecC---CHHHHHHHHHHhC
Confidence 999999987 554 445556677777653 333322 22221 11 478999865 8999999998873
No 126
>PRK08068 transaminase; Reviewed
Probab=99.88 E-value=6.8e-20 Score=188.30 Aligned_cols=286 Identities=10% Similarity=0.033 Sum_probs=195.5
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcc-cEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCC
Q 011842 136 HSRQFEVGVLDWFARLWELENNEY-WGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCL 214 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~-~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~ 214 (476)
+..++++++++++.+.+|.+.+.. ++++|+|+++++..++.+... +++.|++++++|..+...++..|++++.+|++
T Consensus 71 g~~~lr~aia~~~~~~~g~~~~~~~~i~it~G~~~~l~~~~~~~~~--~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~ 148 (389)
T PRK08068 71 GYPFLKEAAADFYKREYGVTLDPETEVAILFGGKAGLVELPQCLMN--PGDTILVPDPGYPDYLSGVALARAQFETMPLI 148 (389)
T ss_pred CCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHHHHHHhCC--CCCEEEEcCCCCcchHHHHHhcCCEEEEeecc
Confidence 567999999999988788654333 588999999999887777655 89999999999999999999999999999997
Q ss_pred C--CCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCcccccccccccC
Q 011842 215 I--SGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKA 289 (476)
Q Consensus 215 ~--~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~ 289 (476)
+ +..+|+++|++.+.++++ +|++++|+|+||.+-+ +++|+++|++|++ ++++|++|+.+.+......
T Consensus 149 ~~~~~~~d~~~l~~~~~~~~~---~v~l~~P~NPTG~~~s~~~~~~l~~la~~~~~-----~ii~Deay~~~~~~~~~~~ 220 (389)
T PRK08068 149 AENNFLPDYTKIPEEVAEKAK---LMYLNYPNNPTGAVATKAFFEETVAFAKKHNI-----GVVHDFAYGAIGFDGQKPV 220 (389)
T ss_pred cccCCCCCHHHHHHhccccce---EEEEECCCCCCCCcCCHHHHHHHHHHHHHcCe-----EEEEehhhhhhccCCCCCc
Confidence 4 356899999998865443 7778889999999976 4688889999999 9999999976543211111
Q ss_pred CCCCCc--ccccEEEEcCCCCC-CCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHh--Chh
Q 011842 290 PKVSFK--KPIGSVSVSGHKFV-GCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRK--GYK 364 (476)
Q Consensus 290 ~~~~~~--~~~Dsi~~s~hK~l-~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~--g~~ 364 (476)
+..... ....+++.|+.|.+ .+++++|+++.++++++.+.....+. ..+.. +..+.++...+ +..
T Consensus 221 s~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~l~~~l~~~~~~~-------~~~~~---~~~q~~~~~~l~~~~~ 290 (389)
T PRK08068 221 SFLQTPGAKDVGIELYTLSKTFNMAGWRVAFAVGNESVIEAINLLQDHL-------FVSLF---GAIQDAAIEALLSDQS 290 (389)
T ss_pred ChhhCCCccCCEEEEecchhccCCccceeEeEecCHHHHHHHHHHHhhc-------cCCCC---hHHHHHHHHHHhCcHH
Confidence 111111 11235667888988 48899999999887766653222211 11111 11222223332 234
Q ss_pred cHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCe-eEEEEecCC---cHHH----hh--ceeecc-------cCCEEEEEE
Q 011842 365 GFQKEVQKCLRNAHYLKDRLLDAGISAMLNELS-STVVFERPQ---DEEF----VR--RWQLAC-------QGNIAHVVV 427 (476)
Q Consensus 365 g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~-~iv~f~~~~---~~~~----~~--~~~l~~-------~~~~lRv~~ 427 (476)
.+++.+++..++++++.+.|++.|+. +.++.. ..+.+..++ ..++ .+ ++.+.. ..+++|+++
T Consensus 291 ~~~~~~~~~~~~r~~~~~~L~~~g~~-~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~ 369 (389)
T PRK08068 291 CVAELVARYESRRNAFISACREIGWE-VDAPKGSFFAWMPVPKGYTSEQFADLLLEKAHVAVAPGNGFGEHGEGYVRVGL 369 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCc-ccCCCeeEEEEEECCCCCCHHHHHHHHHHhCCEEEecchHhCccCCCeEEEEE
Confidence 46777888888999999999998864 334444 445556553 2233 21 344421 246899998
Q ss_pred cCCCCHHHHHHHHHHHH
Q 011842 428 MPNVTIDKLDDFLNELI 444 (476)
Q Consensus 428 ~~~~T~edid~~~~~l~ 444 (476)
. ..++.+...++.|.
T Consensus 370 ~--~~~~~l~~al~~l~ 384 (389)
T PRK08068 370 L--TDEERLREAVERIG 384 (389)
T ss_pred c--CCHHHHHHHHHHHH
Confidence 5 34555555555554
No 127
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.88 E-value=6e-20 Score=191.21 Aligned_cols=286 Identities=8% Similarity=0.001 Sum_probs=203.0
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCC
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLI 215 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~ 215 (476)
+..++++.+.+|+.+..+. +.++++|+|+++++..++.+..+ ||+.|++.+++|..+...++..|++++.+|+++
T Consensus 122 g~~~lr~~ia~~~~~~~~~---~~~Iiit~G~~~al~~~~~~l~~--pgd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~ 196 (431)
T PRK15481 122 VSPELHAWAARWLRDDCPV---AFEIDLTSGAIDAIERLLCAHLL--PGDSVAVEDPCFLSSINMLRYAGFSASPVSVDA 196 (431)
T ss_pred CCHHHHHHHHHHHhhccCC---cCeEEEecCcHHHHHHHHHHhCC--CCCEEEEeCCCcHHHHHHHHHcCCeEEeeccCC
Confidence 4467888888887664332 23599999999999999888776 999999999999999999999999999999976
Q ss_pred CCccCHHHHHHHHHcCCCCcEEEEEe-eCCCccccccCHH---HHHHHHHHh-CCCCCceEEEEecCcccccccccccCC
Q 011842 216 SGEIDCADFKAKLLQNKDKPAIINVN-IGTTVKGAVDDLD---LVIQTLEES-GFTQDRFYIHCDGALFGLMMPFVKKAP 290 (476)
Q Consensus 216 ~g~~D~~~Le~~l~~~~~~p~~vv~t-~gtt~tG~id~l~---~I~~ia~~~-g~~~~~~~lhvD~a~~g~~~~~~~~~~ 290 (476)
+| +|++.|+++++.+++ +++++ ++.||||.+-+.+ +|.++|++| ++ ||++|++|+.+.... ..+
T Consensus 197 ~g-~~~~~l~~~~~~~~k---~i~~~p~p~NPTG~~~s~~~~~~l~~la~~~~~~-----~ii~De~Y~~~~~~~--~~~ 265 (431)
T PRK15481 197 EG-MQPEKLERALAQGAR---AVILTPRAHNPTGCSLSARRAAALRNLLARYPQV-----LVIIDDHFALLSSSP--YHS 265 (431)
T ss_pred CC-CCHHHHHHHHhcCCC---EEEECCCCCCCCCccCCHHHHHHHHHHHHhcCCc-----eEEecCchhhhccCC--CCC
Confidence 54 899999999976544 55565 8999999998765 999999999 99 999999998654321 111
Q ss_pred CCCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhc----H
Q 011842 291 KVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKG----F 366 (476)
Q Consensus 291 ~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g----~ 366 (476)
.+.....-.++..|+.|.+++++++|+++.++++++.+.....+.. .+ ...+.++++..++.... +
T Consensus 266 ~~~~~~~~vi~~~SfSK~~~~GlRiG~~i~~~~~~~~~~~~~~~~~-------~~---~s~~~q~a~~~~l~~~~~~~~l 335 (431)
T PRK15481 266 VIPQTTQRWALIRSVSKALGPDLRLAFVASDSATSARLRLRLNSGT-------QW---VSHLLQDLVYACLTDPEYQARL 335 (431)
T ss_pred CCcCCCCCEEEEeeeccccCCCceeEEEeCCHHHHHHHHHHHhccc-------cC---CCHHHHHHHHHHHhCccHHHHH
Confidence 1221112235667889988899999999998877665532212110 01 12345555555553222 4
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecCC-cHHHhh-----ceeec--------ccCCEEEEEEcCCCC
Q 011842 367 QKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERPQ-DEEFVR-----RWQLA--------CQGNIAHVVVMPNVT 432 (476)
Q Consensus 367 ~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~-~~~~~~-----~~~l~--------~~~~~lRv~~~~~~T 432 (476)
++..+.+.++++++.+.|++.++....+..++.+.+..+. ..++.+ +..+. ..++.+|+++.. .+
T Consensus 336 ~~~~~~~~~~r~~~~~~L~~~~~~~~~p~gg~f~~~~l~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~iRis~~~-~~ 414 (431)
T PRK15481 336 AQARLFYAQRRQKLARALQQYGIAIPSPGDGLNLWLPLDTDSQATALTLAKSGWLVREGEAFGVSAPSHGLRITLST-LN 414 (431)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCccccCCCeEEEEEECCCCHHHHHHHHHHCCcEEecCCccccCCCCCeEEEEcCC-CC
Confidence 5667778888899999999887644345566777777653 233322 22221 113579998864 46
Q ss_pred HHHHHHHHHHHHHHHH
Q 011842 433 IDKLDDFLNELIENRS 448 (476)
Q Consensus 433 ~edid~~~~~l~~~~~ 448 (476)
.++++.+++.|.++.+
T Consensus 415 ~~~i~~~~~~l~~~~~ 430 (431)
T PRK15481 415 DAEINRLAADLHQALN 430 (431)
T ss_pred hHHHHHHHHHHHHHhc
Confidence 8999999999988754
No 128
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.88 E-value=9e-20 Score=188.78 Aligned_cols=292 Identities=10% Similarity=0.024 Sum_probs=198.2
Q ss_pred hHHHHHHHHHHHHHHcC------CCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEE
Q 011842 137 SRQFEVGVLDWFARLWE------LENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVK 210 (476)
Q Consensus 137 ~~~le~~~~~~la~l~g------~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~ 210 (476)
..++++++.+|+.+.++ ...++.++++|+|+++++..++.+... |++.|+++.++|..+...++..|++++.
T Consensus 77 ~~~Lr~aia~~~~~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~--~gd~vlv~~P~y~~~~~~~~~~g~~~~~ 154 (412)
T PTZ00433 77 SPEAREAVATYWRNSFVHKESLKSTIKKDNVVLCSGVSHAILMALTALCD--EGDNILVPAPGFPHYETVCKAYGIEMRF 154 (412)
T ss_pred cHHHHHHHHHHHHhhccccccccCCCChhhEEEeCChHHHHHHHHHHhcC--CCCEEEEccCCcccHHHHHHHcCCEEEE
Confidence 45889999998887553 322334699999999999999888765 8999999999999999999999999999
Q ss_pred EeCCC--CCccCHHHHHHHHHcCCCCcEEEEEeeCCCcccccc---CHHHHHHHHHHhCCCCCceEEEEecCcccccccc
Q 011842 211 VDCLI--SGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVD---DLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPF 285 (476)
Q Consensus 211 v~~~~--~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id---~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~ 285 (476)
+|.++ ++.+|+++|++.+.++++ +|++++++|+||.+- .+++|+++|++||+ +|++|++|..+.+..
T Consensus 155 i~~~~~~~~~~d~~~l~~~~~~~~~---~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~-----~ii~De~y~~~~~~~ 226 (412)
T PTZ00433 155 YNCRPEKDWEADLDEIRRLVDDRTK---ALIMTNPSNPCGSNFSRKHVEDIIRLCEELRL-----PLISDEIYAGMVFNG 226 (412)
T ss_pred EecCccccCcCCHHHHHHHhccCce---EEEEeCCCCCCCcccCHHHHHHHHHHHHHcCC-----eEEEeccccccccCC
Confidence 99863 468999999998876544 677889999999864 58888999999999 999999998665432
Q ss_pred cccCCCCCCccc-ccEEEEcCCCCC-CCCCCceeEEee------hhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHH
Q 011842 286 VKKAPKVSFKKP-IGSVSVSGHKFV-GCPMPCGVQITR------MEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYT 357 (476)
Q Consensus 286 ~~~~~~~~~~~~-~Dsi~~s~hK~l-~~p~~~G~l~~~------~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~ 357 (476)
....+...+... --++..|+.|.+ ..++++|++++. +++++.+...... ..+ ...+.+.++
T Consensus 227 ~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRlG~~i~~~p~~~~~~~~~~~~~~~~~--------~~~---~~~~~q~a~ 295 (412)
T PTZ00433 227 ATFTSVADFDTTVPRVILGGTAKNLVVPGWRLGWLLLVDPHGNGGDFLDGMKRLGML--------VCG---PCSVVQAAL 295 (412)
T ss_pred CCccchhhccCCCceEEEccchhhcCCCCeeEEEEEEeCCcccHHHHHHHHHHHhhc--------cCC---CChHHHHHH
Confidence 111111222211 125667889987 788999999972 2344433221110 001 112333333
Q ss_pred HHHhC---hhcHHHHHHHHHHHHHHHHHHHHhc-CCeEeecCCeeEEEEecCC--------cHHHh----h--ceeecc-
Q 011842 358 LNRKG---YKGFQKEVQKCLRNAHYLKDRLLDA-GISAMLNELSSTVVFERPQ--------DEEFV----R--RWQLAC- 418 (476)
Q Consensus 358 l~~~g---~~g~~~~~~~~~~~a~~l~~~L~~~-g~~~~~~~~~~iv~f~~~~--------~~~~~----~--~~~l~~- 418 (476)
...+. ..-+++..+++.++++.+.+.|++. ++....+...+.+.++.+. +.++. + +..+..
T Consensus 296 ~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~gg~f~~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg 375 (412)
T PTZ00433 296 GEALLNTPQEHLEQIVAKLEEGAMVLYNHIGECIGLSPTMPRGSMFLMSRLDLEKFRDIKSDVEFYEKLLEEENVQVLPG 375 (412)
T ss_pred HHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCeeEEEEEEechhhcCCCCCHHHHHHHHHHhcCEEEeCc
Confidence 33332 2345666777888889999999875 4432333345555554432 22222 1 233321
Q ss_pred ----cCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 011842 419 ----QGNIAHVVVMPNVTIDKLDDFLNELIENRSTWY 451 (476)
Q Consensus 419 ----~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~ 451 (476)
..+++|+++.. .+++++..++.|.+..+.+.
T Consensus 376 ~~f~~~~~iRis~~~--~~e~l~~al~~l~~~~~~~~ 410 (412)
T PTZ00433 376 EIFHMPGFTRLTISR--PVEVLREAVERIKAFCERHK 410 (412)
T ss_pred cccCCCCeEEEEecC--CHHHHHHHHHHHHHHHHHhc
Confidence 14689999864 48889999999988776543
No 129
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.88 E-value=7.2e-20 Score=189.76 Aligned_cols=286 Identities=13% Similarity=0.092 Sum_probs=187.7
Q ss_pred hHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHH---H--HHHcCCeEEEE
Q 011842 137 SRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFK---A--ARMYRMECVKV 211 (476)
Q Consensus 137 ~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~---~--~~~~G~~v~~v 211 (476)
...+|+.+++++++++|.+.. -+++++||+|+..++.+... ||+.|+++.++|.++.. . ....|++++.+
T Consensus 69 ~~~~e~~~~~~la~~~g~~~~---~i~~~sgt~al~~~l~~l~~--~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 143 (416)
T PRK00011 69 VDVVEQLAIDRAKELFGAEYA---NVQPHSGSQANAAVYFALLK--PGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSY 143 (416)
T ss_pred HHHHHHHHHHHHHHHhCCCce---eeecCCchHHHHHHHHHhcC--CCCEEEEeccccCCccccccccccccceeeEeec
Confidence 445666678899999999753 24445678999888877754 89999999999976421 1 12335788888
Q ss_pred eCC-CCCccCHHHHHHHHHc-CCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccC
Q 011842 212 DCL-ISGEIDCADFKAKLLQ-NKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKA 289 (476)
Q Consensus 212 ~~~-~~g~~D~~~Le~~l~~-~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~ 289 (476)
+.+ +++.+|+++|++++.+ +++ +|+++. +.+|...|+++|.++|++||+ ++++|++|+.+........
T Consensus 144 ~~~~~~~~~d~~~l~~~i~~~~~k---~v~~~~--~~~~~~~~~~~I~~la~~~~~-----~livD~a~~~g~~~~g~~~ 213 (416)
T PRK00011 144 GVDEETGLIDYDEVEKLALEHKPK---LIIAGA--SAYSRPIDFKRFREIADEVGA-----YLMVDMAHIAGLVAAGVHP 213 (416)
T ss_pred CcCcccCCcCHHHHHHHHHhcCCC---EEEECC--CcCCCccCHHHHHHHHHHcCC-----EEEEECcchhcccccCccC
Confidence 887 3588999999999975 343 555532 355777899999999999999 9999999864433211111
Q ss_pred CCCCCcccccEEEEcCCCCCCCCCCceeEEeeh-hhhhhhcCC-ccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHH
Q 011842 290 PKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRM-EHINVLSSN-VEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQ 367 (476)
Q Consensus 290 ~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~-~~~~~l~~~-~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~ 367 (476)
..+. .+|+++.|+||++++ ++.|++++++ ++.+.+... ..+. .++.......+++.++.....++++
T Consensus 214 --~~~~-~~di~~~S~~K~l~g-~~gg~i~~~~~~~~~~l~~~~~~~~-------~~~~~~~~~aa~~~a~~~~~~~~~~ 282 (416)
T PRK00011 214 --SPVP-HADVVTTTTHKTLRG-PRGGLILTNDEELAKKINSAVFPGI-------QGGPLMHVIAAKAVAFKEALEPEFK 282 (416)
T ss_pred --CCCC-CCcEEEecCCcCCCC-CCceEEEeCCHHHHHHHHHHhCccc-------cCCccHHHHHHHHHHHHHHHhhhHH
Confidence 1222 579999999999965 5567888864 555544221 1111 1122111222333444343345678
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCeEeec-CCeeEEEEecCC----cHHHh-----hceeec-----c------cCCEEEEE
Q 011842 368 KEVQKCLRNAHYLKDRLLDAGISAMLN-ELSSTVVFERPQ----DEEFV-----RRWQLA-----C------QGNIAHVV 426 (476)
Q Consensus 368 ~~~~~~~~~a~~l~~~L~~~g~~~~~~-~~~~iv~f~~~~----~~~~~-----~~~~l~-----~------~~~~lRv~ 426 (476)
+++++..++++++++.|++.|+..... ..++++.+..++ ...+. +++.+. . ....+|++
T Consensus 283 ~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~~~~~~~~Ri~ 362 (416)
T PRK00011 283 EYAQQVVKNAKALAEALAERGFRVVSGGTDNHLVLVDLRSKGLTGKEAEAALEEANITVNKNAVPFDPRSPFVTSGIRIG 362 (416)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCeeeecCCCCeEEEEeCcccCCCHHHHHHHHHHcCcEEccCcCCCCCCCCCCCCceEec
Confidence 899999999999999999988754421 234666666532 12221 222221 1 12458885
Q ss_pred EcC----CCCHHHHHHHHHHHHHHHH
Q 011842 427 VMP----NVTIDKLDDFLNELIENRS 448 (476)
Q Consensus 427 ~~~----~~T~edid~~~~~l~~~~~ 448 (476)
.+. ..|.+|+++++++|+++..
T Consensus 363 ~~~~~~~~~t~~di~~l~~~l~~~~~ 388 (416)
T PRK00011 363 TPAITTRGFKEAEMKEIAELIADVLD 388 (416)
T ss_pred CHHHhhcCcCHHHHHHHHHHHHHHHh
Confidence 433 5689999999999988754
No 130
>PRK08363 alanine aminotransferase; Validated
Probab=99.87 E-value=8.2e-20 Score=188.26 Aligned_cols=295 Identities=13% Similarity=0.054 Sum_probs=199.7
Q ss_pred hhhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEE-eC
Q 011842 135 VHSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKV-DC 213 (476)
Q Consensus 135 ~~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v-~~ 213 (476)
.+..++++++.+++.+..|...++.++++|+|+++|+..++.+..+ +++.|++++++|.++...++..|++++.+ +.
T Consensus 70 ~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~~~~--~gd~Vl~~~p~y~~~~~~~~~~g~~~v~~~~~ 147 (398)
T PRK08363 70 EGLPELREAIVKREKRKNGVDITPDDVRVTAAVTEALQLIFGALLD--PGDEILIPGPSYPPYTGLVKFYGGVPVEYRTI 147 (398)
T ss_pred CCcHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHhCC--CCCEEEEcCCCCcchHHHHHHcCCEEEEeccc
Confidence 3567999999999988777654445699999999999988887755 99999999999999999999999988888 45
Q ss_pred CCC-CccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCcccccccccccC
Q 011842 214 LIS-GEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKA 289 (476)
Q Consensus 214 ~~~-g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~ 289 (476)
+++ +.+|++.|++.+.++++ +|++++++|+||.+-+ +++|+++|+++|+ ++++|++|+.+.+.. ...
T Consensus 148 ~~~~~~~d~~~l~~~~~~~~~---~v~l~~p~NPtG~~~~~~~~~~l~~~a~~~~~-----~li~Deay~~~~~~~-~~~ 218 (398)
T PRK08363 148 EEEGWQPDIDDIRKKITEKTK---AIAVINPNNPTGALYEKKTLKEILDIAGEHDL-----PVISDEIYDLMTYEG-KHV 218 (398)
T ss_pred cccCCcCCHHHHHhhCCcceE---EEEEECCCCCCCcCcCHHHHHHHHHHHHHcCe-----EEEEhhhhhhhccCC-ccc
Confidence 543 57999999998865543 7777899999999866 8999999999999 999999998654421 111
Q ss_pred CCCCCcccc-cEEEEcCCCC-CCCCCCceeEEe--ehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHh--Ch
Q 011842 290 PKVSFKKPI-GSVSVSGHKF-VGCPMPCGVQIT--RMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRK--GY 363 (476)
Q Consensus 290 ~~~~~~~~~-Dsi~~s~hK~-l~~p~~~G~l~~--~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~--g~ 363 (476)
+........ -++..|++|+ +..++++|++++ ++++++.+......+.. ..+..+ .+.+.++...+ ..
T Consensus 219 ~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~~~~~l~~~~~~~~~--~~~~~s-----~~~q~~~~~~l~~~~ 291 (398)
T PRK08363 219 SPGSLTKDVPVIVMNGLSKVYFATGWRLGYIYFVDPEGKLAEVREAIDKLAR--IRLCPN-----TPAQFAAIAGLTGPM 291 (398)
T ss_pred CHHHcCcCCcEEEEecchhccCCccceEEEEEEeCcHHHHHHHHHHHHHHhc--ccccCC-----hHHHHHHHHHHhCCh
Confidence 111111111 2445788997 678899999998 44444333211111000 011111 22333333333 23
Q ss_pred hcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEE-ecCC-----cHHHh------hceeecc-------cCCEEE
Q 011842 364 KGFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVF-ERPQ-----DEEFV------RRWQLAC-------QGNIAH 424 (476)
Q Consensus 364 ~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f-~~~~-----~~~~~------~~~~l~~-------~~~~lR 424 (476)
+.+++..++..++++++.+.|++.+...+.++..+++.| ..+. +.++. ++..+.. ..+++|
T Consensus 292 ~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~~~~~~l~~~~~~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iR 371 (398)
T PRK08363 292 DYLEEYMKKLKERRDYIYKRLNEIPGISTTKPQGAFYIFPRIEEGPWKDDKEFVLDVLHEAHVLFVHGSGFGEYGAGHFR 371 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCEecCCCeEEEEEEEeccCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEE
Confidence 456677788888999999999887433444555555554 3432 22221 1233311 136899
Q ss_pred EEEcCCCCHHHHHHHHHHHHHHHHH
Q 011842 425 VVVMPNVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 425 v~~~~~~T~edid~~~~~l~~~~~~ 449 (476)
+++. .+.++++..++.|.+..+.
T Consensus 372 is~~--~~~~~l~~~l~~l~~~~~~ 394 (398)
T PRK08363 372 LVFL--PPVEILEEAMDRFEEFMRE 394 (398)
T ss_pred EEec--CCHHHHHHHHHHHHHHHHH
Confidence 9985 4688999999988876654
No 131
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.87 E-value=4.2e-19 Score=183.27 Aligned_cols=290 Identities=14% Similarity=0.004 Sum_probs=194.4
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCC
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLI 215 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~ 215 (476)
+..++++++.+++....|.+.+...+++|+|+|+|+.+++.+... +++.|++++++|..+...++..|++++.++.+.
T Consensus 74 g~~~lr~~ia~~l~~~~~~~~~~~~ii~t~G~t~al~~~~~~l~~--~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~ 151 (403)
T TIGR01265 74 GALAAREAVAEYLSSDLPGKLTADDVVLTSGCSQAIEICIEALAN--PGANILVPRPGFPLYDTRAAFSGLEVRLYDLLP 151 (403)
T ss_pred CCHHHHHHHHHHHHhhcCCCCCHHHEEEecChHHHHHHHHHHhCC--CCCEEEEeCCCchhHHHHHHHcCCEEEEecCCc
Confidence 556788888888776555543345699999999999999888765 899999999999999999999999999998753
Q ss_pred --CCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCcccccccccccCC
Q 011842 216 --SGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAP 290 (476)
Q Consensus 216 --~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~ 290 (476)
++.+|++.+++.+.++++ ++++++++|++|.+-+ +++|+++|+++|+ ++++|++|+.+........+
T Consensus 152 ~~~~~~d~~~l~~~~~~~~~---~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~-----~ii~De~y~~~~~~~~~~~~ 223 (403)
T TIGR01265 152 EKDWEIDLDGLEALADEKTV---AIVVINPSNPCGSVFSRDHLQKIAEVARKLGI-----PIIADEIYGHMVFGDAPFIP 223 (403)
T ss_pred ccCCccCHHHHHHHhCcCcc---EEEEecCCCCCCCCCCHHHHHHHHHHHHHCCC-----EEEEEccccccccCCCCccc
Confidence 467999999998876554 7778889999999954 8999999999999 99999999876543222111
Q ss_pred CCCCcccc-cEEEEcCCCC-CCCCCCceeEEeeh--hh-----hhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHh
Q 011842 291 KVSFKKPI-GSVSVSGHKF-VGCPMPCGVQITRM--EH-----INVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRK 361 (476)
Q Consensus 291 ~~~~~~~~-Dsi~~s~hK~-l~~p~~~G~l~~~~--~~-----~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~ 361 (476)
........ -+++.|+.|. +..++++|++++.+ +. ++.+.....+ .. +.+ .+.+.++...+
T Consensus 224 ~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~~~~~~~~~~~~~------~~--~~~---~~~q~~~~~~l 292 (403)
T TIGR01265 224 MASFASIVPVLSLGGISKRWVVPGWRLGWIIIHDPHGIFRDTVLQGLKNLLQR------IL--GPA---TIVQGALPDIL 292 (403)
T ss_pred hhhhccCCcEEEEeecccccCCCcceEEEEEEeCchhhhHHHHHHHHHHHhhh------hc--CCC---hHHHHHHHHHH
Confidence 11221111 2455678896 67789999999853 22 2222111100 00 111 22222222222
Q ss_pred ---ChhcHHHHHHHHHHHHHHHHHHHHhc-CCeEeecCCeeEEEEecCC--------cHHHhh------ceeecc-----
Q 011842 362 ---GYKGFQKEVQKCLRNAHYLKDRLLDA-GISAMLNELSSTVVFERPQ--------DEEFVR------RWQLAC----- 418 (476)
Q Consensus 362 ---g~~g~~~~~~~~~~~a~~l~~~L~~~-g~~~~~~~~~~iv~f~~~~--------~~~~~~------~~~l~~----- 418 (476)
...-+++..+++.++++++.+.|+.. ++....++.++.+.++.+. +.++.+ +..+..
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~ 372 (403)
T TIGR01265 293 ENTPQEFFDGKISVLKSNAELCYEELKDIPGLVCPKPEGAMYLMVKLELELFPEIKDDVDFCEKLVREESVICLPGSAFG 372 (403)
T ss_pred HhChHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCceeEEEEeccccccCCCCCHHHHHHHHHHhCCEEEeCccccC
Confidence 12345667778888889999999887 4432334456666665542 222222 222321
Q ss_pred cCCEEEEEEcCCCCHHHHHHHHHHHHHHHH
Q 011842 419 QGNIAHVVVMPNVTIDKLDDFLNELIENRS 448 (476)
Q Consensus 419 ~~~~lRv~~~~~~T~edid~~~~~l~~~~~ 448 (476)
..+++|+++.. .++.++..++.|.++.+
T Consensus 373 ~~~~iRis~~~--~~~~l~~~l~~l~~~~~ 400 (403)
T TIGR01265 373 LPNWVRITITV--PESMLEEACSRIKEFCE 400 (403)
T ss_pred CCCeEEEEecC--CHHHHHHHHHHHHHHHH
Confidence 24689999873 47777777777766654
No 132
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.87 E-value=8.1e-20 Score=185.72 Aligned_cols=279 Identities=14% Similarity=0.147 Sum_probs=187.8
Q ss_pred hHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCc---------------EEEecCCCchH----H
Q 011842 137 SRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDG---------------ILYASRESHYS----V 197 (476)
Q Consensus 137 ~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~---------------~Vl~s~~~H~S----~ 197 (476)
..++.+++.+++++++|.+. +++|+|+|.|++.++.++.. +|+ +|+++.+.++. +
T Consensus 43 ~~~~~~~~~~~~a~~~g~~~----~~~~~g~t~al~~al~al~~--~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~ 116 (363)
T TIGR01437 43 IKELVNKTGEYIANLLGVED----AVIVSSASAGIAQSVAAVIT--RGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPV 116 (363)
T ss_pred HHHHHHHHHHHHHHhhCCCe----EEEEcCHHHHHHHHHHHHhc--CCCcchhhcccccccccceEEEECccchhcCCch
Confidence 45888899999999999863 79999999999999988765 665 88887743332 3
Q ss_pred HHHHHHcCCeEEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecC
Q 011842 198 FKAARMYRMECVKVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGA 277 (476)
Q Consensus 198 ~~~~~~~G~~v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a 277 (476)
..++++.|++++.++. ++.+|+++|+++|.++++ .++.++++.+++|.+.|+++|+++|++||+ ++|+|++
T Consensus 117 ~~~~~~~g~~~v~v~~--~~~~d~~~le~ai~~~t~--ai~~v~~~~~~~g~~~~~~~i~~~a~~~gi-----~vivD~a 187 (363)
T TIGR01437 117 ETMVRLGGGKVVEAGY--ANECSAEQLEAAITEKTA--AILYIKSHHCVQKSMLSVEDAAQVAQEHNL-----PLIVDAA 187 (363)
T ss_pred HHHHHhcCCeEEEEcC--CCCCCHHHHHHhcChhce--EEEEEecCCCCcCCcCCHHHHHHHHHHcCC-----eEEEECC
Confidence 5677888999998876 457999999999988775 345567778899999999999999999999 9999999
Q ss_pred cccccccccccCCCCCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHH
Q 011842 278 LFGLMMPFVKKAPKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYT 357 (476)
Q Consensus 278 ~~g~~~~~~~~~~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~ 357 (476)
|+... ... .. .++|++++|+||++.+|. .|+++.++++++.+.....-+ ...+..+. ...+++.++
T Consensus 188 ~~~~~----~~~--~~--~g~D~~~~S~~K~l~gp~-~G~l~~~~~~i~~~~~~~~~~---~~~~~~~~--~~~~gl~aA 253 (363)
T TIGR01437 188 AEEDL----QKY--YR--LGADLVIYSGAKAIEGPT-SGLVLGKKKYIEWVKLQSKGI---GRAMKVGK--ENILGLTAA 253 (363)
T ss_pred CCCch----HHH--HH--cCCCEEEEeCCcccCCCc-eEEEEEcHHHHHHHHhccCCC---cceeccCH--HHHHHHHHH
Confidence 97211 000 01 137999999999998775 899888777665442111100 01111111 123556666
Q ss_pred HHHhChhcHHHHHHHHHHHHHHHHHHHHhc-CCeEeecC-C------eeEEEEecC----CcHHHhhcee-----ec---
Q 011842 358 LNRKGYKGFQKEVQKCLRNAHYLKDRLLDA-GISAMLNE-L------SSTVVFERP----QDEEFVRRWQ-----LA--- 417 (476)
Q Consensus 358 l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~-g~~~~~~~-~------~~iv~f~~~----~~~~~~~~~~-----l~--- 417 (476)
+..+...+. +.+++..++++++.++|++. |+....++ . ...+.|... ...++.+.+. +.
T Consensus 254 l~~~~~~~~-~~~~~~~~~~~~l~~~L~~i~g~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~l~~~L~~~~~~I~~r~ 332 (363)
T TIGR01437 254 LEQYLSTGK-ESGAEMVAKLTPFIEALNTLKGVSASIVQDEAGRDIARAEIRFDESELGMTAADVVQALRQGEPAIYTRG 332 (363)
T ss_pred HHHHHccCc-ccHHHHHHHHHHHHHHHhcCCCeEEEEecCCCCCcCceEEEEEeccCCCCCHHHHHHHHhcCCCCEEEee
Confidence 665533232 33334445677899999987 44333221 1 244555531 2233333221 21
Q ss_pred --ccCCEEEEEEcCCCCHHHHHHHHHHHHHH
Q 011842 418 --CQGNIAHVVVMPNVTIDKLDDFLNELIEN 446 (476)
Q Consensus 418 --~~~~~lRv~~~~~~T~edid~~~~~l~~~ 446 (476)
...+.+|+.... ++++|+|.++++|+++
T Consensus 333 ~~~~~~~~~l~~~~-~~~~e~~~~~~~l~~~ 362 (363)
T TIGR01437 333 YKANEGIIEIDPRS-VTGGQLDIIVERIREI 362 (363)
T ss_pred eeecCCeEEEEeec-CCHHHHHHHHHHHHHh
Confidence 134567776654 6699999999999875
No 133
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.87 E-value=6.9e-20 Score=189.04 Aligned_cols=292 Identities=10% Similarity=-0.007 Sum_probs=199.3
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCC
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLI 215 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~ 215 (476)
+..++++++.+++++.+|.+.+..++++|+|+++|+..++.+... +|+.|+++++.|..+...+...+..++.++++.
T Consensus 71 G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~~~~--~gd~vl~~~p~y~~y~~~~~~~~~~~~~v~~~~ 148 (402)
T PRK06107 71 GTPALRKAIIAKLERRNGLHYADNEITVGGGAKQAIFLALMATLE--AGDEVIIPAPYWVSYPDMVLANDGTPVIVACPE 148 (402)
T ss_pred CCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHhcC--CCCEEEEecCCCcCHHHHHHHcCCEEEEecCCc
Confidence 567999999999999989865455799999999999988876654 899999999988888888888898888888753
Q ss_pred --CCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHh-CCCCCceEEEEecCcccccccccccC
Q 011842 216 --SGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEES-GFTQDRFYIHCDGALFGLMMPFVKKA 289 (476)
Q Consensus 216 --~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~-g~~~~~~~lhvD~a~~g~~~~~~~~~ 289 (476)
++.+|+++|++.+.+++ .+|++++++|+||.+-+ +++|+++|++| ++ ++++|++|+...+......
T Consensus 149 ~~~~~~~~~~l~~~~~~~~---~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~-----~iI~De~y~~l~~~~~~~~ 220 (402)
T PRK06107 149 EQGFKLTPEALEAAITPRT---RWLILNAPSNPTGAVYSRAELRALADVLLRHPHV-----LVLTDDIYDHIRFDDEPTP 220 (402)
T ss_pred ccCCCCCHHHHHhhcCcCc---eEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCe-----EEEEehhccccccCCCCCC
Confidence 35699999999886544 37778889999998864 67888889998 99 9999999985543221111
Q ss_pred CCCCCcc---cccEEEEcCCCCCC-CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHh--Ch
Q 011842 290 PKVSFKK---PIGSVSVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRK--GY 363 (476)
Q Consensus 290 ~~~~~~~---~~Dsi~~s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~--g~ 363 (476)
+...... .-.++..|++|.++ .++++|+++.++++++.+.....+.. .. ...+.++++...+ +.
T Consensus 221 ~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~~~~~~~~~~~~~~~~~~~-----~~-----~s~~~q~~~~~~l~~~~ 290 (402)
T PRK06107 221 HLLAAAPELRDRVLVTNGVSKTYAMTGWRIGYAAGPADLIAAINKLQSQSS-----SC-----PSSISQAAAAAALNGDQ 290 (402)
T ss_pred CHHHhCcCccCCEEEEeccchhhcCcccceeeeecCHHHHHHHHHHHHhcc-----cC-----CChHHHHHHHHHhcCCh
Confidence 1111111 12345567799886 88999999998887665543222211 01 1234455555444 23
Q ss_pred hcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeE-EEEec--------C------CcHHHh----h--ceeecc----
Q 011842 364 KGFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSST-VVFER--------P------QDEEFV----R--RWQLAC---- 418 (476)
Q Consensus 364 ~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~i-v~f~~--------~------~~~~~~----~--~~~l~~---- 418 (476)
..+++..+++.++++++.+.|++.+...+.++..+. +.++. + ++.++. + ++.+..
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~p~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~F 370 (402)
T PRK06107 291 SFVTESVAVYKQRRDYALALLNAIPGLSCLVPDGAFYLYVNCAGLIGKTTPEGKVLETDQDVVLYLLDSAGVAVVQGTAY 370 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCcceEEeeecccccccccccccCCCCHHHHHHHHHHhCCEEEeCcccc
Confidence 345666777788888899999886332333444443 33332 1 112222 2 233321
Q ss_pred -cCCEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Q 011842 419 -QGNIAHVVVMPNVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 419 -~~~~lRv~~~~~~T~edid~~~~~l~~~~~~ 449 (476)
..+++|+++. .+.|+++..++.|.+..++
T Consensus 371 g~~~~iRis~~--~~~e~l~~~l~~l~~~l~~ 400 (402)
T PRK06107 371 GLSPYFRLSIA--TSLETLEEACARIERAVAA 400 (402)
T ss_pred CCCCeEEEEeC--CCHHHHHHHHHHHHHHHHh
Confidence 1368999988 3699999999988877654
No 134
>PRK07683 aminotransferase A; Validated
Probab=99.87 E-value=1.5e-19 Score=185.52 Aligned_cols=290 Identities=11% Similarity=0.067 Sum_probs=202.2
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcc-cEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCC
Q 011842 136 HSRQFEVGVLDWFARLWELENNEY-WGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCL 214 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~-~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~ 214 (476)
+..++++++.+++.+..|++.++. .+++|+|+++|+..++.+... +|+.|+++.+.|..+...++.+|++++.++.+
T Consensus 66 g~~~lr~~ia~~l~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~ 143 (387)
T PRK07683 66 GLLELRKAACNFVKDKYDLHYSPESEIIVTIGASEAIDIAFRTILE--PGTEVILPAPIYPGYEPIIRLCGAKPVFIDTR 143 (387)
T ss_pred CCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhCC--CCCEEEEcCCCccchHHHHHHcCCEEEEeecC
Confidence 567999999999988777753333 599999999999988877655 89999999999999999999999999999987
Q ss_pred C-CCccCHHHHHHHHHcCCCCcEEEEEeeCCCcccccc---CHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCC
Q 011842 215 I-SGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVD---DLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAP 290 (476)
Q Consensus 215 ~-~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id---~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~ 290 (476)
+ +..+|+++|++.+.++++ ++++++++|+||.+- ++++|+++|+++|+ ++++|++|..+.+.. ...+
T Consensus 144 ~~~~~~~~~~l~~~~~~~~~---~i~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~-----~ii~De~y~~~~~~~-~~~~ 214 (387)
T PRK07683 144 STGFRLTAEALENAITEKTR---CVVLPYPSNPTGVTLSKEELQDIADVLKDKNI-----FVLSDEIYSELVYEQ-PHTS 214 (387)
T ss_pred cccCCCCHHHHHHhcCcCce---EEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCe-----EEEEecccccceeCC-CcCC
Confidence 4 456899999998876543 677889999999984 48899999999999 999999998665432 1212
Q ss_pred CCCCcc--cccEEEEcCCCCCC-CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHh--Chhc
Q 011842 291 KVSFKK--PIGSVSVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRK--GYKG 365 (476)
Q Consensus 291 ~~~~~~--~~Dsi~~s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~--g~~g 365 (476)
.....+ .-.++..++.|.++ .++++|+++++.++++.+.....|.. .+ . ..+.+.++...+ +...
T Consensus 215 ~~~~~~~~~~vi~~~s~SK~~~~pGlRiG~i~~~~~l~~~~~~~~~~~~------~~-~---~~~~q~~~~~~l~~~~~~ 284 (387)
T PRK07683 215 IAHFPEMREKTIVINGLSKSHSMTGWRIGFLFAPSYLAKHILKVHQYNV------TC-A---SSISQYAALEALTAGKDD 284 (387)
T ss_pred hhhccCCcCCeEEEeeccccccCccceeEEEEcCHHHHHHHHHHHHhcc------CC-C---ChHHHHHHHHHHhCChHH
Confidence 122211 12456688899887 88999999999887666543222211 11 1 122333333333 3334
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEE-ecCC----cHHHh------hceeecc-------cCCEEEEEE
Q 011842 366 FQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVF-ERPQ----DEEFV------RRWQLAC-------QGNIAHVVV 427 (476)
Q Consensus 366 ~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f-~~~~----~~~~~------~~~~l~~-------~~~~lRv~~ 427 (476)
+++..++..++++++.+.|++.++. +.++..+.+.| ..+. +.++. +++.+.. ..+++|+++
T Consensus 285 ~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~Ri~~ 363 (387)
T PRK07683 285 AKMMRHQYKKRRDYVYNRLISMGLD-VEKPTGAFYLFPSIGHFTMSSFDFALDLVEEAGLAVVPGSAFSEYGEGYVRLSY 363 (387)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCc-ccCCCeeEEEEEecccCCCCHHHHHHHHHHhCCEEEcCchhhCCCCCCeEEEEe
Confidence 5566777788889999999887754 33444444333 3332 22221 1333321 247899998
Q ss_pred cCCCCHHHHHHHHHHHHHHHHH
Q 011842 428 MPNVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 428 ~~~~T~edid~~~~~l~~~~~~ 449 (476)
.. +++++...++.|.++.++
T Consensus 364 ~~--~~~~~~~al~~l~~~l~~ 383 (387)
T PRK07683 364 AY--SIETLKEGLDRLEAFLQQ 383 (387)
T ss_pred cC--CHHHHHHHHHHHHHHHHh
Confidence 74 688888888888876653
No 135
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.87 E-value=6.4e-20 Score=169.52 Aligned_cols=285 Identities=16% Similarity=0.145 Sum_probs=217.2
Q ss_pred HHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCC--CCCccCH
Q 011842 144 VLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCL--ISGEIDC 221 (476)
Q Consensus 144 ~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~--~~g~~D~ 221 (476)
..+.+++++|++. .=+|.|+-+|-+.+|.+... +||.|+++..+||+-.-++...|+++..||.. ++..+++
T Consensus 66 F~~dlaeFlg~D~----~R~t~GARe~KfavMhal~~--~gd~vV~D~~aHYttyvAAEragl~v~eVp~tg~Pey~i~~ 139 (382)
T COG1103 66 FLEDLAEFLGMDE----VRVTAGAREAKFAVMHALCK--EGDWVVVDSLAHYTTYVAAERAGLNVAEVPNTGYPEYKITP 139 (382)
T ss_pred HHHHHHHHhCCce----eeecccchhhHHHHHHHhcc--CCCEEEEcCcchHHHHHHHHhcCCeEEecCCCCCCceEecH
Confidence 3444899999985 66999999999999999887 99999999999999999999999999999964 5688999
Q ss_pred HHHHHHHHcC----CCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCccc
Q 011842 222 ADFKAKLLQN----KDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKP 297 (476)
Q Consensus 222 ~~Le~~l~~~----~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~ 297 (476)
+...+.|++- ++-|.+.++|++....|.+.|-+.++++|+++|+ .++..+||..+-+| ++..+.
T Consensus 140 e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~Dakkva~ic~e~gv-----PlllN~AYt~Grmp-------vs~ke~ 207 (382)
T COG1103 140 EGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLADAKKVAKICREYGV-----PLLLNCAYTVGRMP-------VSGKEI 207 (382)
T ss_pred HHHHHHHHHHHhccCCCceEEEEeccCCCcCCchhhHHHHHHHHHcCC-----ceEeecceeecccc-------cccccc
Confidence 9998888653 2447899999999999999999999999999999 99999999988777 666664
Q ss_pred -ccEEEEcCCCCCCCCCCceeEEeehhhhhhh-cCCccccCC-CCCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHH
Q 011842 298 -IGSVSVSGHKFVGCPMPCGVQITRMEHINVL-SSNVEYLAS-RDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCL 374 (476)
Q Consensus 298 -~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l-~~~~~yl~~-~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~ 374 (476)
+|+|+.|+||.+.+.-+||++.++.++.+.. ..+-.+... .-.-+.||..+.+.+.+.+++-..- + --.+++...
T Consensus 208 g~DFiVgSGHKsmAAs~PiGvl~~~eE~ae~V~r~Sg~~~~~KEvellGCT~rGapivTlmASfP~V~-e-RVkrWdeEv 285 (382)
T COG1103 208 GADFIVGSGHKSMAASAPIGVLAMSEEWAEIVLRRSGRAFPKKEVELLGCTVRGAPIVTLMASFPHVV-E-RVKRWDEEV 285 (382)
T ss_pred CCCEEEecCccchhccCCeeEEeehhHHHHHHHhhcccccccceeeeecccccCchHHHHHhcCHHHH-H-HHHHHHHHH
Confidence 9999999999999989999999999875543 222222221 1233567777776666666654431 1 133556677
Q ss_pred HHHHHHHHHHHhcCCeEee---cCCeeEEEEecCCcHHHh-----hceeec-------------ccCCEEEEEEcCCCCH
Q 011842 375 RNAHYLKDRLLDAGISAML---NELSSTVVFERPQDEEFV-----RRWQLA-------------CQGNIAHVVVMPNVTI 433 (476)
Q Consensus 375 ~~a~~l~~~L~~~g~~~~~---~~~~~iv~f~~~~~~~~~-----~~~~l~-------------~~~~~lRv~~~~~~T~ 433 (476)
+.+++|.+.|+.+|....+ |..+-.+.|..|.-.++. ++|.+- .....+.+++ ...|.
T Consensus 286 ~kaR~fv~elEkigg~~qlG~rPk~HdLm~Fetp~f~eIakk~~r~gyFlY~ELK~RgI~GI~~G~Tk~~K~sv-yGl~~ 364 (382)
T COG1103 286 EKARWFVAELEKIGGVKQLGERPKNHDLMKFETPVFHEIAKKHKRKGYFLYEELKKRGIHGIQPGQTKYFKLSV-YGLSW 364 (382)
T ss_pred HHHHHHHHHHHHhhhHHHhCCCCcccceeeecCchHHHHHHhCcCCceeeHHHHHhcCccccccCceeEEEEEe-ecCCH
Confidence 8999999999998743332 334567778777533332 233321 1123455554 46799
Q ss_pred HHHHHHHHHHHHHHHH
Q 011842 434 DKLDDFLNELIENRST 449 (476)
Q Consensus 434 edid~~~~~l~~~~~~ 449 (476)
|+++.++++++++.++
T Consensus 365 Eqve~V~~afkeI~ek 380 (382)
T COG1103 365 EQVEYVVDAFKEIAEK 380 (382)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999999865
No 136
>PRK08175 aminotransferase; Validated
Probab=99.87 E-value=3.1e-19 Score=183.79 Aligned_cols=293 Identities=11% Similarity=0.075 Sum_probs=199.4
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcc-cEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCC
Q 011842 136 HSRQFEVGVLDWFARLWELENNEY-WGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCL 214 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~-~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~ 214 (476)
+..++++++.+++.+.+|+..++. ..++|+|+++++...+.+... ||+.|++++++|..+...++..|++++.++.+
T Consensus 68 G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~~l~~~~~~~~~--~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~ 145 (395)
T PRK08175 68 GIPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKEGLAHLMLATLD--HGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLV 145 (395)
T ss_pred CCHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHHHHHHHHhCC--CCCEEEEcCCCCcchHHHHHHcCCeEEEEecc
Confidence 567999999999998878764333 589999999998877766655 89999999999999888889999999999987
Q ss_pred CCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCH---HHHHHHHHHhCCCCCceEEEEecCcccccccccccCCC
Q 011842 215 ISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDL---DLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPK 291 (476)
Q Consensus 215 ~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l---~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~ 291 (476)
+++ .+.++|++++.....++.++++++++|+||.+-+. ++|+++|++||+ ++++|++|+.+.+......+.
T Consensus 146 ~~~-~~~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~i-----~ii~De~y~~l~~~~~~~~~~ 219 (395)
T PRK08175 146 EGV-DFFNELERAIRESYPKPKMMILGFPSNPTAQCVELEFFEKVVALAKRYDV-----LVVHDLAYADIVYDGWKAPSI 219 (395)
T ss_pred cCC-CcHHHHHHHHhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCc-----EEEEecchHhhccCCCCCcch
Confidence 543 35889999887543334577788899999998775 799999999999 999999997655422111111
Q ss_pred CCCcc--cccEEEEcCCCCCC-CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHh--ChhcH
Q 011842 292 VSFKK--PIGSVSVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRK--GYKGF 366 (476)
Q Consensus 292 ~~~~~--~~Dsi~~s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~--g~~g~ 366 (476)
..... ...+++.|+.|.++ .++++|+++.++++++.+.....+.. .+.+. ..+.++...+ ....+
T Consensus 220 ~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~~~~~l~~~~~~~~~~~~-------~~~~~---~~q~~~~~~l~~~~~~~ 289 (395)
T PRK08175 220 MQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVGNPELVSALARIKSYHD-------YGTFT---PLQVAAIAALEGDQQCV 289 (395)
T ss_pred hcCCCcccCEEEEeeccccccCcchhheeeeCCHHHHHHHHHHHhhcc-------cCCCc---HHHHHHHHHHhCcHHHH
Confidence 11111 12356688999984 67899999988877665543222211 11111 1222222222 12335
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecCCc------HHHhh------ceeecc-------cCCEEEEEE
Q 011842 367 QKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERPQD------EEFVR------RWQLAC-------QGNIAHVVV 427 (476)
Q Consensus 367 ~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~~------~~~~~------~~~l~~-------~~~~lRv~~ 427 (476)
++..++..++++++.+.|++.|+....+..++.+.+..++. .++.+ +..+.. ..+.+|+++
T Consensus 290 ~~~~~~~~~~~~~~~~~L~~~~~~~~~p~~g~~i~i~l~~~~~~~~~~~~~~~l~~~~gv~v~p~~~f~~~~~~~lRis~ 369 (395)
T PRK08175 290 RDIAEQYKRRRDVLVKGLHEAGWMVEMPKASMYVWAKIPEPYAAMGSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFAL 369 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCcccCCCEEEEEEEECCcccCCCCHHHHHHHHHHhCCEEEeCchhhCcCCCCeEEEEe
Confidence 66667777888999999999876433344567777766532 22321 333321 235899988
Q ss_pred cCCCCHHHHHHHHHHHHHHHH
Q 011842 428 MPNVTIDKLDDFLNELIENRS 448 (476)
Q Consensus 428 ~~~~T~edid~~~~~l~~~~~ 448 (476)
. .+.+.+...++.|.++.+
T Consensus 370 ~--~~~~~~~~al~~l~~~l~ 388 (395)
T PRK08175 370 I--ENRDRIRQAIRGIKAMFR 388 (395)
T ss_pred C--CCHHHHHHHHHHHHHHHH
Confidence 5 467777777777766554
No 137
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.87 E-value=2.1e-19 Score=182.05 Aligned_cols=286 Identities=12% Similarity=0.048 Sum_probs=196.6
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcc-cEEEcCCchhHHHHHHHHHHhhCCC---cEEEecCCCchHHHHHHHHcCCeEEEE
Q 011842 136 HSRQFEVGVLDWFARLWELENNEY-WGYITNCGTEGNLHGILVGREVFPD---GILYASRESHYSVFKAARMYRMECVKV 211 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~-~g~~t~ggt~An~~al~aa~~~~p~---~~Vl~s~~~H~S~~~~~~~~G~~v~~v 211 (476)
+..++++++.+++.+..|++.+.. .+++|+|++++++.++.+... ++ +.|+++.++|..+...++.+|++++.+
T Consensus 37 G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~~~~~~~~--~g~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~v 114 (350)
T TIGR03537 37 GTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHFPLVFID--PEEDRRRVIFGTPGYPVYERGALFAGGEPTAV 114 (350)
T ss_pred CCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHHcC--CCCCCceEEEcCCCCcchHHHHHhcCCEEEEc
Confidence 456999999999998888764444 699999999999988877765 55 699999999999999999999999999
Q ss_pred eCCC--CCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCccccccccc
Q 011842 212 DCLI--SGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFV 286 (476)
Q Consensus 212 ~~~~--~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~ 286 (476)
+++. +..+|+++|++++.++++ ++++++++|+||.+-+ +++|+++|++||+ ++++|++|+......
T Consensus 115 ~~~~~~~~~~d~~~l~~~~~~~~~---~i~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~-----~ii~De~y~~~~~~~- 185 (350)
T TIGR03537 115 KLKKEDGFLLRLEKVEKSILEETK---IVWINYPHNPTGATAPRSYLKETIAMCREHGI-----ILCSDECYTEIYFGE- 185 (350)
T ss_pred ccCcccCCccCHHHHHHhhhhccE---EEEEeCCCCCcCcccCHHHHHHHHHHHHHcCc-----EEEEeccccccccCC-
Confidence 9863 345899999999877554 7778889999999877 8999999999999 999999997554321
Q ss_pred ccCCCCCCcccccEEEEcCCCCC-CCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhC-hh
Q 011842 287 KKAPKVSFKKPIGSVSVSGHKFV-GCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKG-YK 364 (476)
Q Consensus 287 ~~~~~~~~~~~~Dsi~~s~hK~l-~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g-~~ 364 (476)
...+.......-.++..|++|.+ .+++++|+++.++++.+.+.....+. ..+.+ .+.+.++...+. .+
T Consensus 186 ~~~~~~~~~~~~~i~~~s~SK~~g~~GlRiG~~~~~~~~~~~~~~~~~~~-------~~~~~---~~~q~~~~~~l~~~~ 255 (350)
T TIGR03537 186 PPHSALEVGIENVLAFHSLSKRSGMTGYRSGFVAGDEKLISFLRKLRANF-------GVASP---DFVQAAAKAAWSDDN 255 (350)
T ss_pred CCCchhhcCcCCEEEEeecccccCCccccceeeecCHHHHHHHHHHHHhh-------ccCCC---HHHHHHHHHHhCCcH
Confidence 11111111111135556889987 57889999998776665553222121 11111 122222222222 23
Q ss_pred cHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCe-eEEEEecCC---cHHHh-----hceeec-------ccCCEEEEEEc
Q 011842 365 GFQKEVQKCLRNAHYLKDRLLDAGISAMLNELS-STVVFERPQ---DEEFV-----RRWQLA-------CQGNIAHVVVM 428 (476)
Q Consensus 365 g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~-~iv~f~~~~---~~~~~-----~~~~l~-------~~~~~lRv~~~ 428 (476)
..++..+++.++.+.+.+.|++.|+. +.++.. ..+.+..+. ...+. ++..+. ...+.+|+++.
T Consensus 256 ~~~~~r~~l~~~~~~~~~~l~~~g~~-~~~~~g~~~~~~~~~~~~~~~~l~~~L~~~gv~v~~g~~f~~~~~~~~Ri~~~ 334 (350)
T TIGR03537 256 HVLERRKIFKRKRDLFIEFFNKVGLE-YLYPDATFYLWVKVPSGIDAKDYALRLLENGIVVAPGENFGSGEEGYVRVALV 334 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCc-ccCCCeEEEEEEECCCCCCHHHHHHHHHHCCEEEcCchhhCCCCCCEEEEEec
Confidence 45666777788888899999988764 334443 445455553 22232 223332 11468999875
Q ss_pred CCCCHHHHHHHHHHHHH
Q 011842 429 PNVTIDKLDDFLNELIE 445 (476)
Q Consensus 429 ~~~T~edid~~~~~l~~ 445 (476)
.+.++++..+..|++
T Consensus 335 --~~~~~~~~~l~~~~~ 349 (350)
T TIGR03537 335 --PTLEECEEALRLWER 349 (350)
T ss_pred --CCHHHHHHHHHHHhc
Confidence 568888888877654
No 138
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.87 E-value=1.6e-19 Score=188.24 Aligned_cols=292 Identities=13% Similarity=0.073 Sum_probs=188.7
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCC
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLI 215 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~ 215 (476)
+..++++++.++ +|.+. +++|+|||+|+..++.+..+ ||| |+++++.+.++...+++.|++++.+++++
T Consensus 79 g~~~Lreaia~~----~~~~~----vv~t~ggt~A~~~~~~all~--pGD-Vii~~p~~~~~~~~i~~~G~~~v~v~~~~ 147 (460)
T PRK13238 79 SYYRLEDAVKDI----FGYPY----TIPTHQGRAAEQILFPVLIK--KGD-VVPSNYHFDTTRAHIELNGATAVDLVIDE 147 (460)
T ss_pred CHHHHHHHHHHH----hCCCc----EEECCCHHHHHHHHHHHhCC--CCC-EEccCCcccchHHHHHHcCCEEEEEeccc
Confidence 456777775554 55542 89999999999999888766 899 88888766677777889999999999853
Q ss_pred ----------CCccCHHHHHHHHHcCC-CCcEEEEEeeCCCccc-cc---cCHHHHHHHHHHhCCCCCceEEEEecCccc
Q 011842 216 ----------SGEIDCADFKAKLLQNK-DKPAIINVNIGTTVKG-AV---DDLDLVIQTLEESGFTQDRFYIHCDGALFG 280 (476)
Q Consensus 216 ----------~g~~D~~~Le~~l~~~~-~~p~~vv~t~gtt~tG-~i---d~l~~I~~ia~~~g~~~~~~~lhvD~a~~g 280 (476)
.|.+|+++|++.|.+.+ .++.+|++++++|++| .+ +++++|+++|++||+ ++++|+++..
T Consensus 148 ~~~~~~~~~f~g~id~e~Le~~i~~~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi-----~li~Daa~~~ 222 (460)
T PRK13238 148 ALDTGSRHPFKGNFDLEKLEALIEEVGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGI-----PVVIDAARFA 222 (460)
T ss_pred cccccccccccCCcCHHHHHHHHhhcCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCC-----EEEEECcchh
Confidence 24599999999998643 2355888999999998 44 567899999999999 9999998742
Q ss_pred --ccccc-----cccCCCCC----CcccccEEEEcCCCCCCCCCCceeEEeeh-hhhhhhcCCccccCCCCCcccCCCCC
Q 011842 281 --LMMPF-----VKKAPKVS----FKKPIGSVSVSGHKFVGCPMPCGVQITRM-EHINVLSSNVEYLASRDATIMGSRNG 348 (476)
Q Consensus 281 --~~~~~-----~~~~~~~~----~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~-~~~~~l~~~~~yl~~~~~~~~~sr~~ 348 (476)
.++.. ..+.+..+ .....|++++|+||.+.+|.| |++++++ ++.+.+...... ...-.++ ++-+.
T Consensus 223 e~a~f~~~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~g~~~~G-G~i~~~d~~l~~~~~~~~~~-~~g~~t~-~g~~~ 299 (460)
T PRK13238 223 ENAYFIKQREPGYKDKSIKEIAREMFSYADGLTMSAKKDAMVNIG-GLLCFRDEDLFTECRTLCIL-YEGFPTY-GGLAG 299 (460)
T ss_pred hhhhhhhhccccccCCCHHHHhhhhcccCcEEEEecccCCCCcce-eEEEcChHHHHHHhhhcccc-cCCcccc-cCcHH
Confidence 22211 11111000 012389999999999998875 8888885 455544322100 0000011 11111
Q ss_pred hhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecC-----------CcHHHhhce---
Q 011842 349 HAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERP-----------QDEEFVRRW--- 414 (476)
Q Consensus 349 ~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~-----------~~~~~~~~~--- 414 (476)
....++..++...-. +..++...+++++|.+.|++.|+..+.+.....++.... ++..+...+
T Consensus 300 ~~~~Ala~~l~e~~~---~~~~~~~~~~~~~l~~~L~~~G~~~~~p~Gg~~v~~d~~~~~~~~~~~~~~~~~~a~~L~~e 376 (460)
T PRK13238 300 RDMEALAVGLYEGMD---EDYLAYRIGQVEYLGEGLEEAGVPIQTPAGGHAVFVDAGKFLPHIPAEQFPAQALACELYLE 376 (460)
T ss_pred HHHHHHHhhHHHhhC---hHHHHHHHHHHHHHHHHHHHCCCCeEccCCceEEEEEchhcCCCCCCCCCchHHHHHHHHHH
Confidence 111222222221111 234444555789999999999988776666666655431 112222111
Q ss_pred -ee---c-------c----------cCCEEEEEEcC-CCCHHHHHHHHHHHHHHHHH
Q 011842 415 -QL---A-------C----------QGNIAHVVVMP-NVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 415 -~l---~-------~----------~~~~lRv~~~~-~~T~edid~~~~~l~~~~~~ 449 (476)
.+ + . ..+.+|+.+.. ..|.+++|.+++.|+++.+.
T Consensus 377 ~GV~~~~~~~f~~~~~~~~~~~~~~~~~~~Rla~~rr~~~~~~~~~~~~~l~~~~~~ 433 (460)
T PRK13238 377 AGIRGVEIGSLLLGRDPKTGEQLPAPAELLRLAIPRRVYTQSHMDYVAEALKAVKEN 433 (460)
T ss_pred cCeeeecccceecccCCCCccccCCccceEEEecccccCCHHHHHHHHHHHHHHHHh
Confidence 11 1 0 13678998764 44999999999999887643
No 139
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.87 E-value=2.3e-19 Score=184.68 Aligned_cols=287 Identities=12% Similarity=0.036 Sum_probs=196.9
Q ss_pred hhHHHHHHHHHHHHHHcCCC--CCc-ccEEEcCCchhHHHHHHHHHHhhCCCcE--EEecCCCchHHHHHHHHcCCeEEE
Q 011842 136 HSRQFEVGVLDWFARLWELE--NNE-YWGYITNCGTEGNLHGILVGREVFPDGI--LYASRESHYSVFKAARMYRMECVK 210 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~--~~~-~~g~~t~ggt~An~~al~aa~~~~p~~~--Vl~s~~~H~S~~~~~~~~G~~v~~ 210 (476)
+..++++++++|+.+..|++ .+. .++++|+|+++++..++.+..+ ||+. |+++.+.|..+...++..|++++.
T Consensus 65 G~~~lr~aia~~~~~~~~~~~~~~~~~~i~it~Ga~~al~~~~~~l~~--~gd~~~vlv~~P~y~~~~~~~~~~g~~~~~ 142 (393)
T TIGR03538 65 GLPELRQAIARWLERRFDLPTGVDPERHVLPVNGTREALFAFAQAVIN--PGQAPLVVMPNPFYQIYEGAALLAGAEPYF 142 (393)
T ss_pred CCHHHHHHHHHHHHHhhCCcccCCCCceEEECCCcHHHHHHHHHHHcC--CCCcceEEecCCCCcchHHHHHhcCCeEEE
Confidence 45689999999998887765 233 2588999999999988888766 7774 999999999999999999999999
Q ss_pred EeCCCC--CccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCcccccccc
Q 011842 211 VDCLIS--GEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPF 285 (476)
Q Consensus 211 v~~~~~--g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~ 285 (476)
+|++++ +.+|+++|++++.++++ ++++++++|+||.+-+ +++|+++|++|++ +|++|++|..+.+..
T Consensus 143 v~~~~~~~~~~d~~~l~~~~~~~~k---~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~-----~ii~De~Y~~~~~~~ 214 (393)
T TIGR03538 143 LNCTAENGFLPDFDAVPESVWRRCQ---LLFVCSPGNPTGAVLSLDTLKKLIELADQYGF-----IIASDECYSELYFDE 214 (393)
T ss_pred eeccccCCCCCCHHHHHHHHhhcce---EEEEeCCCCCcCcccCHHHHHHHHHHHHHCCE-----EEEECcchhhcccCC
Confidence 999643 46899999998876554 7777899999999866 7899999999999 999999998654421
Q ss_pred c-ccCCCC----CCc--c-cccEEEEcCCC-CCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHH
Q 011842 286 V-KKAPKV----SFK--K-PIGSVSVSGHK-FVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWY 356 (476)
Q Consensus 286 ~-~~~~~~----~~~--~-~~Dsi~~s~hK-~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~ 356 (476)
. ...+.+ ... . .--+++.|+.| |+++++++|+++.++++++.+.....+.. .+ ...+.+++
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~~~GlRvG~~i~~~~l~~~~~~~~~~~~-------~~---~~~~~q~~ 284 (393)
T TIGR03538 215 GNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNLPGLRSGFVAGDAEILKAFLRYRTYHG-------CA---MPIPTQLA 284 (393)
T ss_pred CCCCcCHHHhcccccccccccEEEEecchhhcCCcccceEEEecCHHHHHHHHHHHHhhc-------cC---cCHHHHHH
Confidence 1 111100 000 0 11256788899 67889999999998877665532222211 01 11334444
Q ss_pred HHHHhC-hhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecC-CcHHHh----h--ceeec-c---------
Q 011842 357 TLNRKG-YKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERP-QDEEFV----R--RWQLA-C--------- 418 (476)
Q Consensus 357 ~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~-~~~~~~----~--~~~l~-~--------- 418 (476)
++..+. .+.+++..++..++++.+.+.|++. +....+..++.+.+..+ ++.++. + +..+. .
T Consensus 285 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~p~gg~f~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~ 363 (393)
T TIGR03538 285 SIAAWNDEQHVRENRALYREKFAAVLEILGQV-LDLELPDAGFYLWPKVPGDDEAFARALYEEENVTVLPGRFLAREAEG 363 (393)
T ss_pred HHHHhcChHHHHHHHHHHHHHHHHHHHHHHhh-CcccCCCeeEEEEEECCCCHHHHHHHHHHHCCEEEeCCccccccccC
Confidence 444442 2345666777788888888888765 22223445566666666 333332 1 33331 0
Q ss_pred ---cCCEEEEEEcCCCCHHHHHHHHHHHHH
Q 011842 419 ---QGNIAHVVVMPNVTIDKLDDFLNELIE 445 (476)
Q Consensus 419 ---~~~~lRv~~~~~~T~edid~~~~~l~~ 445 (476)
..+++|+++.. ++++++..++.|.+
T Consensus 364 ~~~~~~~~Ris~~~--~~~~l~~~l~~l~~ 391 (393)
T TIGR03538 364 VNPGEGRVRIALVA--PLEECVEAAERIRS 391 (393)
T ss_pred CCCCCCEEEEEecC--CHHHHHHHHHHHHH
Confidence 13679998864 57888888877765
No 140
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.87 E-value=1.2e-20 Score=186.48 Aligned_cols=227 Identities=15% Similarity=0.084 Sum_probs=160.9
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCC--
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLIS-- 216 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~-- 216 (476)
.+.+++.+.+++++|.+. ..++|+|+|.++..++.+... |++.|+++++.|.|+..++.+.|++++.++.+.+
T Consensus 59 g~i~~~~~~~A~~~ga~~---~~~~~~Gst~a~~~~l~al~~--~gd~Vlv~~~~h~s~~~~~~~~g~~~~~v~~~~~~~ 133 (294)
T cd00615 59 GPIKEAQELAARAFGAKH---TFFLVNGTSSSNKAVILAVCG--PGDKILIDRNCHKSVINGLVLSGAVPVYLKPERNPY 133 (294)
T ss_pred hHHHHHHHHHHHHhCCCC---EEEEcCcHHHHHHHHHHHcCC--CCCEEEEeCCchHHHHHHHHHCCCEEEEecCccCcc
Confidence 455677778899999763 245589999999998887765 9999999999999999999999999998877532
Q ss_pred ----CccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCC
Q 011842 217 ----GEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKV 292 (476)
Q Consensus 217 ----g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~ 292 (476)
+.+|+++|++++.+++ .+.+|+++++ |++|.+.|+++|+++|++||+ +++||+||++.... ....+ .
T Consensus 134 ~~~~~~i~~~~l~~~l~~~~-~~k~v~l~~p-~~~G~~~dl~~I~~~~~~~g~-----~livDeA~~~~~~~-~~~~~-~ 204 (294)
T cd00615 134 YGIAGGIPPETFKKALIEHP-DAKAAVITNP-TYYGICYNLRKIVEEAHHRGL-----PVLVDEAHGAHFRF-HPILP-S 204 (294)
T ss_pred cCcCCCCCHHHHHHHHHhCC-CceEEEEECC-CCCCEecCHHHHHHHHHhcCC-----eEEEECcchhhhcc-CcccC-c
Confidence 4799999999997643 2457777776 689999999999999999999 99999999864321 11111 1
Q ss_pred CCc-ccccEEEEcCCCCCCCCCCceeEEeehhhh--hhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHH
Q 011842 293 SFK-KPIGSVSVSGHKFVGCPMPCGVQITRMEHI--NVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKE 369 (476)
Q Consensus 293 ~~~-~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~--~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~ 369 (476)
... ..+|+++.|+||+++++.++|++.++++.. +.+......+. ..|.+.....++-.+++.+...| ++.
T Consensus 205 ~~~~~~~div~~S~hK~l~g~~~~~~l~~~~~~~~~~~~~~~~~~~~------ttsps~~~~asl~~a~~~~~~~g-~~~ 277 (294)
T cd00615 205 SAAMAGADIVVQSTHKTLPALTQGSMIHVKGDLVNPDRVNEALNLHQ------STSPSYLILASLDVARAMMALEG-KEL 277 (294)
T ss_pred chhhcCCcEEEEchhcccchHhHHHHHHhCCCcCCHHHHHHHHHHHC------CCCcHHHHHHHHHHHHHHHHHHh-HHH
Confidence 222 248999999999998777788888876521 11211111110 12222122223334444443334 556
Q ss_pred HHHHHHHHHHHHHHHHh
Q 011842 370 VQKCLRNAHYLKDRLLD 386 (476)
Q Consensus 370 ~~~~~~~a~~l~~~L~~ 386 (476)
+++..+++++++++|++
T Consensus 278 ~~~~~~~~~~~r~~l~~ 294 (294)
T cd00615 278 VEELIELALYARQEINK 294 (294)
T ss_pred HHHHHHHHHHHHHHHhC
Confidence 88889999999988763
No 141
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.87 E-value=3.6e-19 Score=182.38 Aligned_cols=281 Identities=13% Similarity=0.108 Sum_probs=188.0
Q ss_pred HHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCC---CCcc
Q 011842 143 GVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLI---SGEI 219 (476)
Q Consensus 143 ~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~---~g~~ 219 (476)
++++++++++|++++ ++++|+|+|+|+..++.+... +++.|+++++.|..+...++..|++++.++++. ++.+
T Consensus 70 ~lr~~ia~~l~~~~~--~v~~~~g~t~al~~~~~~~~~--~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~ 145 (380)
T PRK06225 70 ELRELILKDLGLDDD--EALITAGATESLYLVMRAFLS--PGDNAVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKL 145 (380)
T ss_pred HHHHHHHHhcCCCCC--cEEEeCCHHHHHHHHHHHhcC--CCCEEEEcCCCCcchHHHHHHhCceEEeeccccccCCccC
Confidence 455556777888754 599999999999999888765 889999999999888888899999999999742 3579
Q ss_pred CHHHHHHHHHcCCCCcEEEEEeeCCCcccccc---CHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCcc
Q 011842 220 DCADFKAKLLQNKDKPAIINVNIGTTVKGAVD---DLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKK 296 (476)
Q Consensus 220 D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id---~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~ 296 (476)
|+++|++.+.++++ +++++++++++|.+- ++++|+++|++||+ ++++|++|+.+.... ........
T Consensus 146 d~~~l~~~~~~~~~---~v~l~~p~NptG~~~~~~~~~~i~~~a~~~~~-----~ii~De~y~~~~~~~---~~~~~~~~ 214 (380)
T PRK06225 146 TPELVKENMDENTR---LIYLIDPLNPLGSSYTEEEIKEFAEIARDNDA-----FLLHDCTYRDFAREH---TLAAEYAP 214 (380)
T ss_pred CHHHHHhhcCCCce---EEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCc-----EEEEehhHHHHhccC---CchhhcCC
Confidence 99999999876554 777778999999874 59999999999999 999999986443211 11011111
Q ss_pred cccEEEEcCCCCCC-CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhC--hhcHHHHHHHH
Q 011842 297 PIGSVSVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKG--YKGFQKEVQKC 373 (476)
Q Consensus 297 ~~Dsi~~s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g--~~g~~~~~~~~ 373 (476)
...++..+++|+++ .++++|++++++++++.+.... . .+.. .+ .+.+.++...+. ..-+++..+..
T Consensus 215 ~~~i~~~s~SK~~g~~G~RiG~i~~~~~l~~~~~~~~-~-----~~~~--~~---~~~~~~a~~~l~~~~~~~~~~~~~~ 283 (380)
T PRK06225 215 EHTVTSYSFSKIFGMAGLRIGAVVATPDLIEVVKSIV-I-----NDLG--TN---VIAQEAAIAGLKVKDEWIDRIRRTT 283 (380)
T ss_pred CCEEEEeechhhcCCccceeEEEecCHHHHHHHHHHH-h-----cccC--CC---HHHHHHHHHHHhcchHHHHHHHHHH
Confidence 23455667889996 6688999999888766543211 0 0111 11 222222222221 12234444455
Q ss_pred HHHHHHHHHHHHhc-CCeE-eecCCeeEEEEecCC----cHHHh-----hceeecc--------cCCEEEEEEcCCCCHH
Q 011842 374 LRNAHYLKDRLLDA-GISA-MLNELSSTVVFERPQ----DEEFV-----RRWQLAC--------QGNIAHVVVMPNVTID 434 (476)
Q Consensus 374 ~~~a~~l~~~L~~~-g~~~-~~~~~~~iv~f~~~~----~~~~~-----~~~~l~~--------~~~~lRv~~~~~~T~e 434 (476)
.++++++.+.|++. +... ..++.++++.+..+. ..++. +++.+.. ..+.+|+++. .++|
T Consensus 284 ~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~iR~s~~--~~~e 361 (380)
T PRK06225 284 FKNQKLIKEAVDEIEGVFLPVYPSHGNMMVIDISEAGIDPEDLVEYLLERKIFVRQGTYTSKRFGDRYIRVSFS--IPRE 361 (380)
T ss_pred HHHHHHHHHHHHhCcCCccccCCCCCeEEEEEcccccCCHHHHHHHHHHCCEEEcCCcccCcCCCCceEEEEeC--CCHH
Confidence 56677788888874 4322 234455566555432 22222 2333321 1257999876 4799
Q ss_pred HHHHHHHHHHHHHHHHH
Q 011842 435 KLDDFLNELIENRSTWY 451 (476)
Q Consensus 435 did~~~~~l~~~~~~~~ 451 (476)
+++.+++.|+++.+.+.
T Consensus 362 ~l~~~~~~l~~~~~~~~ 378 (380)
T PRK06225 362 QVEVFCEEFPDVVETLR 378 (380)
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 99999999999887654
No 142
>PLN02368 alanine transaminase
Probab=99.87 E-value=5e-20 Score=189.50 Aligned_cols=327 Identities=9% Similarity=-0.065 Sum_probs=207.7
Q ss_pred CCcccccccccCCCccccccCCCCCc-HHHHHHHHHHHHhcccccccCCCCcC-CcchHHHHHHHHHhhCCCCCCcccCc
Q 011842 55 KNVHASCFSVTEPEADDEFTGDKEAY-MAGVLARYRKTLMERTKHHLGYPYNL-DFDYGALAQLQHFSINNLGDPFIESN 132 (476)
Q Consensus 55 ~~~~~~~~~~~~p~~~~~~~~~~~~~-~~~il~~~~~~~~~~~~~~~g~p~~~-~~~~~~l~~~l~~~~n~~g~~~~~~~ 132 (476)
++.+...+.+++|++.- +++.. +..++.-+.. . ...+.|... .+++..+.+.+.......+. ...++
T Consensus 36 ~g~~vi~l~iG~Pd~~~----~~~~~~~~~~~~~~~~----~--~~~~~p~~~~~~p~~~i~~a~~~l~~~~~~-~~~Y~ 104 (407)
T PLN02368 36 EGKKIIFTNVGNPHALG----QKPLTFPRQVVALCQA----P--FLLDDPNVGLLFPADAIARAKHYLSLTSGG-LGAYS 104 (407)
T ss_pred HhhhhhcccCCChhHcC----CCCchHHHHHHHHhcC----c--hhcCCccccccCCHHHHHHHHHHHhcCCCC-CCCCC
Confidence 34567889999998741 11111 2334433322 1 123455421 12334444444432111111 11222
Q ss_pred cchhhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHH-hhCCCcEEEecCCCchHHHHHHHHcCCeEEEE
Q 011842 133 YGVHSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGR-EVFPDGILYASRESHYSVFKAARMYRMECVKV 211 (476)
Q Consensus 133 ~~~~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~-~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v 211 (476)
...+..++++++.+|+.+..|++.++.++++|+|+++++..++.+.. + ||+.|++++++|..+...++..|++++.+
T Consensus 105 ~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~--pGd~Vli~~P~Y~~y~~~~~~~g~~~v~v 182 (407)
T PLN02368 105 DSRGLPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVIRG--EKDGVLVPVPQYPLYSATISLLGGTLVPY 182 (407)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHcCC--CCCEEEEeCCCCccHHHHHHHcCCEEEEE
Confidence 23356799999999999988876445579999999999998888765 4 89999999999999999999999999999
Q ss_pred eCCC--CCccCHHHHHHHHHcC---CCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCcccccc
Q 011842 212 DCLI--SGEIDCADFKAKLLQN---KDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMM 283 (476)
Q Consensus 212 ~~~~--~g~~D~~~Le~~l~~~---~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~ 283 (476)
++++ ++.+|++.|++.+++. ..++.++++++|.|+||.+-+ +++|+++|++||+ ||++|++|+.+.+
T Consensus 183 ~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~-----~II~DE~Y~~l~y 257 (407)
T PLN02368 183 YLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERL-----VLLGDEVYQQNIY 257 (407)
T ss_pred ecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCC-----EEEEEcccccccc
Confidence 9874 3689999999999742 113457888899999999954 7788889999999 9999999987765
Q ss_pred ccc-ccCCCCC----C----ccc-ccEEEEcCCCCC--CCCCCceeEEe---ehhhhhhhcCCccccCCCCCcccCCCCC
Q 011842 284 PFV-KKAPKVS----F----KKP-IGSVSVSGHKFV--GCPMPCGVQIT---RMEHINVLSSNVEYLASRDATIMGSRNG 348 (476)
Q Consensus 284 ~~~-~~~~~~~----~----~~~-~Dsi~~s~hK~l--~~p~~~G~l~~---~~~~~~~l~~~~~yl~~~~~~~~~sr~~ 348 (476)
... .+.+... . .+. --++..|+.|.+ +++|++||+++ +.++++.+.... .. ..+.
T Consensus 258 ~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~li~~~~~~~-~~-------~~~~-- 327 (407)
T PLN02368 258 QDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVEEIYKVA-SI-------ALSP-- 327 (407)
T ss_pred CCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCHHHHHHHHHHh-cc-------cCCC--
Confidence 321 1111111 1 011 124456778875 48999999995 556665553321 11 0111
Q ss_pred hhHHHHHHHHHHhCh------------hcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCC-eeEEEEecCCcHHH
Q 011842 349 HAPIFLWYTLNRKGY------------KGFQKEVQKCLRNAHYLKDRLLDAGISAMLNEL-SSTVVFERPQDEEF 410 (476)
Q Consensus 349 ~~~l~~~~~l~~~g~------------~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~-~~iv~f~~~~~~~~ 410 (476)
..+.++++..++.. +..+++++.+.++++++.+.|++.+...+..|. +..++.+++-++..
T Consensus 328 -~~~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g~~~~~P~Gafy~~~~i~lp~~~ 401 (407)
T PLN02368 328 -NVSGQIFMGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSCKNVVCNFTEGAMYSFPQIKLPPKA 401 (407)
T ss_pred -CcHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEeCCCCeeeEeccCCCCCHHH
Confidence 13455555555421 112345677888999999999997433344444 44444444433333
No 143
>PRK09105 putative aminotransferase; Provisional
Probab=99.86 E-value=1.8e-19 Score=183.75 Aligned_cols=270 Identities=14% Similarity=0.036 Sum_probs=190.0
Q ss_pred HHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccCHHH
Q 011842 144 VLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCAD 223 (476)
Q Consensus 144 ~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~~~ 223 (476)
+++.+++.+|++++ ++++|+|+++++..++.+..+ +++.|++++++|..+...++..|++++.+|.++++.+|++.
T Consensus 83 Lr~aia~~~~v~~e--~I~it~Gs~~ai~~~~~~l~~--~gd~Vli~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~d~~~ 158 (370)
T PRK09105 83 LRTLFAAQEGLPAD--HVMAYAGSSEPLNYAVLAFTS--PTAGLVTADPTYEAGWRAADAQGAPVAKVPLRADGAHDVKA 158 (370)
T ss_pred HHHHHHHHhCcChh--hEEEcCChHHHHHHHHHHHcC--CCCEEEEeCCChHHHHHHHHHcCCeEEEecCCCCCCCCHHH
Confidence 33345667788754 599999999999998887765 89999999999999999999999999999998788899999
Q ss_pred HHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHH--hCCCCCceEEEEecCcccccccccccCCCCCCcc-cccE
Q 011842 224 FKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEE--SGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKK-PIGS 300 (476)
Q Consensus 224 Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~--~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~-~~Ds 300 (476)
|++. .++++ ++++++++|+||.+.+.++|.++++. +++ |+++|++|..+.. . .+..+... ..++
T Consensus 159 l~~~-~~~~~---~v~l~nP~NPTG~~~~~~~l~~l~~~~~~~~-----~lIvDEaY~~f~~-~---~s~~~~~~~~~~v 225 (370)
T PRK09105 159 MLAA-DPNAG---LIYICNPNNPTGTVTPRADIEWLLANKPAGS-----VLLVDEAYIHFSD-A---PSVVDLVAQRKDL 225 (370)
T ss_pred HHhc-CCCCC---EEEEeCCCCCCCcCcCHHHHHHHHHhCCCCc-----EEEEECchHHhcc-C---cchHHHHhhCCCE
Confidence 9876 33333 77888999999999999988888764 367 9999999954321 1 11112211 2344
Q ss_pred -EEEcCCCCCC-CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhCh-hcHHHHHHHHHHHH
Q 011842 301 -VSVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGY-KGFQKEVQKCLRNA 377 (476)
Q Consensus 301 -i~~s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~-~g~~~~~~~~~~~a 377 (476)
+..|++|.++ .++++|+++.++++++.+... .+ .+ .....++++...+.. +.+++..++..+++
T Consensus 226 i~~~SfSK~~g~~GlRiG~~v~~~~~i~~l~~~-~~---------~~---~~~~~~~aa~~~L~~~~~~~~~~~~~~~~r 292 (370)
T PRK09105 226 IVLRTFSKLYGMAGMRLGLAAARPDLLAKLARF-GH---------NP---LPVPAAAAGLASLRDPKLVPQRRAENAAVR 292 (370)
T ss_pred EEEecccHhhcCCccceeeeecCHHHHHHHHhc-CC---------CC---cCHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 4457889874 889999999988877665322 11 01 112344445544432 33566667788899
Q ss_pred HHHHHHHHhcCCeEeecCCeeEEEEecCC-cHHHh-----hceeec----ccCCEEEEEEcCCCCHHHHHHHHHHHHHHH
Q 011842 378 HYLKDRLLDAGISAMLNELSSTVVFERPQ-DEEFV-----RRWQLA----CQGNIAHVVVMPNVTIDKLDDFLNELIENR 447 (476)
Q Consensus 378 ~~l~~~L~~~g~~~~~~~~~~iv~f~~~~-~~~~~-----~~~~l~----~~~~~lRv~~~~~~T~edid~~~~~l~~~~ 447 (476)
+++.+.|++.|+. +.++..+.+.+..+. ..++. +++.+. ...+++|+++. +++++++|+++|+++.
T Consensus 293 ~~l~~~L~~~g~~-~~~~~~~f~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~Ris~~---~~~~~~~l~~al~~~~ 368 (370)
T PRK09105 293 EDTIAWLKKKGYK-CTPSQANCFMVDVKRPAKAVADAMAKQGVFIGRSWPIWPNWVRVTVG---SEEEMAAFRSAFAKVM 368 (370)
T ss_pred HHHHHHHHHCCCC-cCCCCCcEEEEeCCCCHHHHHHHHHHCCcEEecCCCCCCCeEEEEcC---CHHHHHHHHHHHHHHh
Confidence 9999999998764 334555555565542 23332 233331 12478999876 6899999999998764
No 144
>PLN02231 alanine transaminase
Probab=99.86 E-value=7e-19 Score=186.55 Aligned_cols=331 Identities=10% Similarity=-0.030 Sum_probs=216.6
Q ss_pred CCcCCcchHHHHHHHHHhhCCCCCCcccCccchhhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhC
Q 011842 103 PYNLDFDYGALAQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVF 182 (476)
Q Consensus 103 p~~~~~~~~~l~~~l~~~~n~~g~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~ 182 (476)
|....|+...+..+.....+..+.....+....|..++++.+.+|+.+..|++.+..++++|+|+++|+..++.+... .
T Consensus 136 ~~~~~fp~~~i~~a~~~l~~~~~~~~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~~ai~~~~~~l~~-~ 214 (534)
T PLN02231 136 ETHGLFSADAIERAWQILDQIPGRATGAYSHSQGIKGLRDAIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIR-S 214 (534)
T ss_pred CccccCCHHHHHHHHHHHHhcCCccccCcCCCCCcHHHHHHHHHHHHhccCCCCCcccEEEeCCHHHHHHHHHHHhcc-C
Confidence 444556656666655543333232222223344788999999999999888776566799999999999998887753 2
Q ss_pred CCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCC--CccCHHHHHHHHHcCC---CCcEEEEEeeCCCcccccc---CHH
Q 011842 183 PDGILYASRESHYSVFKAARMYRMECVKVDCLIS--GEIDCADFKAKLLQNK---DKPAIINVNIGTTVKGAVD---DLD 254 (476)
Q Consensus 183 p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~--g~~D~~~Le~~l~~~~---~~p~~vv~t~gtt~tG~id---~l~ 254 (476)
+++.|+++.+.|..+...++..|++++.++++++ +.+|+++|++++++.. .++.+++++++.|+||.+- .++
T Consensus 215 ~gd~Vli~~P~Y~~y~~~~~~~g~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~vls~e~l~ 294 (534)
T PLN02231 215 EKDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALVVINPGNPTGQVLAEENQR 294 (534)
T ss_pred CCCEEEEeCCCChhHHHHHHHcCCEEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCCcCCCHHHHH
Confidence 7899999999999999999999999999999753 6899999999997521 1345777788999999985 578
Q ss_pred HHHHHHHHhCCCCCceEEEEecCccccccccc-ccCCCCCC------cc-cccEE-EEcCCCCC--CCCCCceeEEe---
Q 011842 255 LVIQTLEESGFTQDRFYIHCDGALFGLMMPFV-KKAPKVSF------KK-PIGSV-SVSGHKFV--GCPMPCGVQIT--- 320 (476)
Q Consensus 255 ~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~-~~~~~~~~------~~-~~Dsi-~~s~hK~l--~~p~~~G~l~~--- 320 (476)
+|+++|++||+ ||++|++|....+... ...+.... .+ ....+ ..|+.|.+ .+++++||+.+
T Consensus 295 ~Iv~~a~~~~l-----~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy~~~~~~ 369 (534)
T PLN02231 295 DIVEFCKQEGL-----VLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGF 369 (534)
T ss_pred HHHHHHHHcCC-----EEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccceEEEEEecC
Confidence 99999999999 9999999987665321 11111111 01 12233 44788943 47999999986
Q ss_pred ehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHh-----ChhcHH-------HHHHHHHHHHHHHHHHHHhcC
Q 011842 321 RMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRK-----GYKGFQ-------KEVQKCLRNAHYLKDRLLDAG 388 (476)
Q Consensus 321 ~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~-----g~~g~~-------~~~~~~~~~a~~l~~~L~~~g 388 (476)
++++++.+...... . .++. .+.+.++...+ |...+. ++.+.+.++++++.+.|++.+
T Consensus 370 ~~~l~~~l~k~~~~------~-~~s~----~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~~ 438 (534)
T PLN02231 370 TSDVREQIYKVASV------N-LCSN----ISGQILASLVMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALNSLE 438 (534)
T ss_pred CHHHHHHHHHHHhh------h-cCCC----hHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 34455544321111 0 1111 12333332222 112222 345677888999999999873
Q ss_pred CeEeecCCeeEEEE-ec--CCc------------HH-H----hh--ceee-ccc-------CCEEEEEEcCCCCHHHHHH
Q 011842 389 ISAMLNELSSTVVF-ER--PQD------------EE-F----VR--RWQL-ACQ-------GNIAHVVVMPNVTIDKLDD 438 (476)
Q Consensus 389 ~~~~~~~~~~iv~f-~~--~~~------------~~-~----~~--~~~l-~~~-------~~~lRv~~~~~~T~edid~ 438 (476)
...+.++..+.+.| +. +.. +. + .+ +..+ +.. ...+|+++ ..++++|+.
T Consensus 439 gi~~~~p~Ggfylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~~g~~~~Rit~--~~~~e~l~e 516 (534)
T PLN02231 439 GVTCNKAEGAMYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQVPGTWHFRCTI--LPQEDKIPA 516 (534)
T ss_pred CceecCCCeeeEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCCCCCCCeEEEEe--CCCHHHHHH
Confidence 33445555555555 22 211 11 1 11 2222 211 23588877 478999999
Q ss_pred HHHHHHHHHHHHHh
Q 011842 439 FLNELIENRSTWYE 452 (476)
Q Consensus 439 ~~~~l~~~~~~~~~ 452 (476)
.++.|.+..+.+++
T Consensus 517 al~RL~~~~~~~~~ 530 (534)
T PLN02231 517 IVSRLTEFHKSFMD 530 (534)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999998888775
No 145
>PRK09265 aminotransferase AlaT; Validated
Probab=99.86 E-value=3.3e-19 Score=184.09 Aligned_cols=294 Identities=12% Similarity=0.033 Sum_probs=190.2
Q ss_pred hhHHHHHHHHHHHHHHc--CCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeC
Q 011842 136 HSRQFEVGVLDWFARLW--ELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDC 213 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~--g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~ 213 (476)
+..++++++.+++.+.. ++++ .++++|+|+++++..++.+... ||+.|++++++|..+..+++..|++++.+++
T Consensus 73 G~~~lr~~ia~~~~~~~~~~~~~--~~i~~t~G~~~~l~~~~~~~~~--~gd~Vlv~~p~y~~~~~~~~~~g~~~v~~~~ 148 (404)
T PRK09265 73 GLFSARKAIMQYYQQKGIPDVDV--DDIYIGNGVSELIVMAMQALLN--NGDEVLVPAPDYPLWTAAVSLSGGKPVHYLC 148 (404)
T ss_pred CcHHHHHHHHHHHhccCCCCCCc--ccEEEeCChHHHHHHHHHHhCC--CCCEEEEeCCCCcChHHHHHHcCCEEEEEec
Confidence 45688888888876432 3443 4589999999999888877755 8999999999999999999999999998887
Q ss_pred CC--CCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCccccccccccc
Q 011842 214 LI--SGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKK 288 (476)
Q Consensus 214 ~~--~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~ 288 (476)
+. ++.+|+++|++.+.++++ +|++++++|+||.+.+ +++|+++|++||+ ++++|++|+.+.+.....
T Consensus 149 ~~~~~~~~d~~~l~~~~~~~~~---~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~-----~ii~De~y~~~~~~~~~~ 220 (404)
T PRK09265 149 DEEAGWFPDLDDIRSKITPRTK---AIVIINPNNPTGAVYSKELLEEIVEIARQHNL-----IIFADEIYDKILYDGAVH 220 (404)
T ss_pred ccccCCCCCHHHHHHhccccce---EEEEECCCCCCCcCCCHHHHHHHHHHHHHCCC-----EEEEehhhhhccCCCCCc
Confidence 63 457999999998865554 7788899999999988 8999999999999 999999998665432211
Q ss_pred CCCCCCcccccEE-EEcCCCCC-CCCCCceeEEee-hh-hhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhCh-
Q 011842 289 APKVSFKKPIGSV-SVSGHKFV-GCPMPCGVQITR-ME-HINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGY- 363 (476)
Q Consensus 289 ~~~~~~~~~~Dsi-~~s~hK~l-~~p~~~G~l~~~-~~-~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~- 363 (476)
.+.........++ ..|+.|.+ ++++++|++++. ++ ..+.+......+.. .... ...+.+.++...+..
T Consensus 221 ~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~~~~~~~~~~~--~~~~-----~~~~~q~~~~~~l~~~ 293 (404)
T PRK09265 221 ISIASLAPDLLCVTFNGLSKAYRVAGFRVGWMVLSGPKKHAKGYIEGLDMLAS--MRLC-----ANVPAQHAIQTALGGY 293 (404)
T ss_pred CCHHHcCCCceEEEEecchhhccCcccceEEEEEeCchHHHHHHHHHHHHHhc--cccC-----CCcHHHHHHHHHhcCc
Confidence 1111111222333 45668987 678999999974 22 21111100001100 0011 112334444444432
Q ss_pred hcHHHH---HHHHHHHHHHHHHHHHhcCCeEeecCC-eeEEEEecCC-------cHHHh------hceee-c------cc
Q 011842 364 KGFQKE---VQKCLRNAHYLKDRLLDAGISAMLNEL-SSTVVFERPQ-------DEEFV------RRWQL-A------CQ 419 (476)
Q Consensus 364 ~g~~~~---~~~~~~~a~~l~~~L~~~g~~~~~~~~-~~iv~f~~~~-------~~~~~------~~~~l-~------~~ 419 (476)
+.+.+. .++..++++++.+.|++.+...+.++. .+.+.+..+. +.++. +++.+ + ..
T Consensus 294 ~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~p~~g~~l~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~pg~~F~~~~ 373 (404)
T PRK09265 294 QSINELILPGGRLYEQRDRAWELLNAIPGVSCVKPKGALYAFPKLDPKVYPIHDDEQFVLDLLLQEKVLLVQGTGFNWPE 373 (404)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCcceEEEEEecccccCCCCHHHHHHHHHHhCCEEEECchhhCCCC
Confidence 122222 235667788888899876333334444 4455444432 22221 22323 1 12
Q ss_pred CCEEEEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 011842 420 GNIAHVVVMPNVTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 420 ~~~lRv~~~~~~T~edid~~~~~l~~~~~~~ 450 (476)
.+.+|+++. .+.++++..++.|.+..+..
T Consensus 374 ~~~~Ri~~~--~~~e~l~~~l~rl~~~l~~~ 402 (404)
T PRK09265 374 PDHFRIVTL--PRVDDLEEAIGRIGRFLSGY 402 (404)
T ss_pred CCeEEEEeC--CCHHHHHHHHHHHHHHHHHh
Confidence 468999984 68999999999998877643
No 146
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.86 E-value=1.3e-19 Score=183.46 Aligned_cols=280 Identities=15% Similarity=0.052 Sum_probs=184.4
Q ss_pred HHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCC-CCcc
Q 011842 141 EVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLI-SGEI 219 (476)
Q Consensus 141 e~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~-~g~~ 219 (476)
..++.+.+++++|.+. .++|+|||+|+..++.+.+. .|++.|+++..+|.+...++...|++++.+++++ ++.+
T Consensus 20 ~~~~~~~la~~~~~~~----~~~~~sgt~al~~~l~~l~~-~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 94 (352)
T cd00616 20 VREFEKAFAEYLGVKY----AVAVSSGTAALHLALRALGI-GPGDEVIVPSFTFVATANAILLLGATPVFVDIDPDTYNI 94 (352)
T ss_pred HHHHHHHHHHHhCCCe----EEEECCHHHHHHHHHHHcCC-CCCCEEEeCCcchHHHHHHHHHcCCeEEEEecCCCcCCc
Confidence 3445556777888642 88899999999998887632 3899999999999999999999999999999987 7889
Q ss_pred CHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCccccc
Q 011842 220 DCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKPIG 299 (476)
Q Consensus 220 D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~~D 299 (476)
|+++|++.+.++++ +|++++ ++|.+.|+++|.++|+++|+ ++++|++|+.+.....+. + ....|
T Consensus 95 d~~~l~~~i~~~~~---~v~~~~---~~G~~~~~~~i~~l~~~~~i-----~li~D~a~~~g~~~~~~~---~--~~~~d 158 (352)
T cd00616 95 DPELIEAAITPRTK---AIIPVH---LYGNPADMDAIMAIAKRHGL-----PVIEDAAQALGATYKGRK---V--GTFGD 158 (352)
T ss_pred CHHHHHHhcCcCCe---EEEEEC---CCCCcCCHHHHHHHHHHcCC-----eEEEECCCCCCCeECCEE---c--ccCcc
Confidence 99999999865553 666654 57999999999999999999 999999998554322111 1 11135
Q ss_pred EEEEc--CCCCCCCCCCceeEEeeh-hhhhhhcCCccccCCC-----CCcccCCCCChhHHHHHHHHHHhChhcHHHHHH
Q 011842 300 SVSVS--GHKFVGCPMPCGVQITRM-EHINVLSSNVEYLASR-----DATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQ 371 (476)
Q Consensus 300 si~~s--~hK~l~~p~~~G~l~~~~-~~~~~l~~~~~yl~~~-----~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~ 371 (476)
..++| .|||+++| ..|++++++ ++.+.+.....+.... .....+...+...+..+..+. ..+++++..+
T Consensus 159 ~~~~S~~~~K~~~~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~--~l~~~~~~~~ 235 (352)
T cd00616 159 AGAFSFHPTKNLTTG-EGGAVVTNDEELAERARLLRNHGRDRDRFKYEHEILGYNYRLSEIQAAIGLA--QLEKLDEIIA 235 (352)
T ss_pred eeEEcCCCCCCCccc-CceEEEECCHHHHHHHHHHHHcCCCCCCCccccceeeeccCcCHHHHHHHHH--HHHhhHHHHH
Confidence 55555 55999644 457777765 4443321100000000 000011111122233333332 2356788888
Q ss_pred HHHHHHHHHHHHHHhc-CCeEeecCC-----eeEEEEecCC-----cHHHhh-----ceee-----cc------------
Q 011842 372 KCLRNAHYLKDRLLDA-GISAMLNEL-----SSTVVFERPQ-----DEEFVR-----RWQL-----AC------------ 418 (476)
Q Consensus 372 ~~~~~a~~l~~~L~~~-g~~~~~~~~-----~~iv~f~~~~-----~~~~~~-----~~~l-----~~------------ 418 (476)
+..++++++++.|++. |+..+.++. ..+++|..++ ..++.+ +..+ +.
T Consensus 236 ~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~ 315 (352)
T cd00616 236 RRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPEAGESRDELIEALKEAGIETRVHYPPLHHQPPYKKLLGY 315 (352)
T ss_pred HHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECCcCCCCHHHHHHHHHHCCCCeeeecCccccCHhhhhccCC
Confidence 8899999999999986 444332221 2466666542 222222 1111 10
Q ss_pred -----------cCCEEEEEEcCCCCHHHHHHHHHHHH
Q 011842 419 -----------QGNIAHVVVMPNVTIDKLDDFLNELI 444 (476)
Q Consensus 419 -----------~~~~lRv~~~~~~T~edid~~~~~l~ 444 (476)
..+.+|+++++.+|++||++++++|+
T Consensus 316 ~~~~~~~a~~~~~~~l~l~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 316 PPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred CcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence 02579999999999999999999874
No 147
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.86 E-value=1.8e-19 Score=184.48 Aligned_cols=274 Identities=11% Similarity=-0.020 Sum_probs=196.0
Q ss_pred HHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccCHH
Q 011842 143 GVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCA 222 (476)
Q Consensus 143 ~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~~ 222 (476)
++++.+++++|++++ ++++|+|+++++..++.+... ||+.|++++++|..+...++..|++++.+|.++++.+|++
T Consensus 90 ~lr~~ia~~~~~~~~--~I~~t~Ga~~~i~~~~~~~~~--~gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~d~~ 165 (380)
T PLN03026 90 RLRAALAEDSGLESE--NILVGCGADELIDLLMRCVLD--PGDKIIDCPPTFGMYVFDAAVNGAEVIKVPRTPDFSLDVP 165 (380)
T ss_pred HHHHHHHHHhCcChh--hEEEcCCHHHHHHHHHHHhcC--CCCEEEEcCCChHHHHHHHHHcCCEEEEeecCCCCCcCHH
Confidence 355556677788754 489999999999888877655 8999999999998888888999999999999877889999
Q ss_pred HHHHHH-HcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCcccccEE
Q 011842 223 DFKAKL-LQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKPIGSV 301 (476)
Q Consensus 223 ~Le~~l-~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~~Dsi 301 (476)
+|++++ .++++ +|++++++|+||.+.+.+++.++++.. + |+++|++|..+.... .....+. ...-.++
T Consensus 166 ~l~~~~~~~~~~---~v~l~~P~NPTG~~~~~~~l~~l~~~~-~-----~vi~DeaY~~~~~~~-~~~~~~~-~~~~viv 234 (380)
T PLN03026 166 RIVEAVETHKPK---LLFLTSPNNPDGSIISDDDLLKILELP-I-----LVVLDEAYIEFSTQE-SRMKWVK-KYDNLIV 234 (380)
T ss_pred HHHHHHhccCCc---EEEEeCCCCCCCCCCCHHHHHHHHhcC-C-----EEEEECcchhhcCCc-chHHHHH-hCCCEEE
Confidence 999998 44444 788889999999999999999999865 7 999999997543211 1111011 0112466
Q ss_pred EEcCCCCCC-CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhCh-hcHHHHHHHHHHHHHH
Q 011842 302 SVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGY-KGFQKEVQKCLRNAHY 379 (476)
Q Consensus 302 ~~s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~-~g~~~~~~~~~~~a~~ 379 (476)
..++.|.++ +++++|+++.++++++.+...... .. ...+.+.++...+.. +-+++..++..+.+++
T Consensus 235 ~~SfSK~~glaGlRiGy~~~~~~~i~~l~~~~~~-------~~-----~~~~~q~aa~~aL~~~~~~~~~~~~~~~~r~~ 302 (380)
T PLN03026 235 LRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQP-------YN-----VSVAAEVAACAALSNPKYLEDVKNALVEERER 302 (380)
T ss_pred EecchHhhcCccccceeeecCHHHHHHHHHhcCC-------CC-----CCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHH
Confidence 788889886 899999999998877665322111 01 113344444444422 2356667778888999
Q ss_pred HHHHHHhcCCeEeecCCeeEEEEecCC---cHHHh-----hceeec-c----cCCEEEEEEcCCCCHHHHHHHHHHHHHH
Q 011842 380 LKDRLLDAGISAMLNELSSTVVFERPQ---DEEFV-----RRWQLA-C----QGNIAHVVVMPNVTIDKLDDFLNELIEN 446 (476)
Q Consensus 380 l~~~L~~~g~~~~~~~~~~iv~f~~~~---~~~~~-----~~~~l~-~----~~~~lRv~~~~~~T~edid~~~~~l~~~ 446 (476)
+.+.|++.++....++.++.+.+..+. ..++. +++.+. + ..+.+|+++. +.+++++|+++|+++
T Consensus 303 l~~~L~~~~~~~~~p~~~~f~~~~~~~~~~~~~~~~~l~~~gI~v~~~~~~~~~~~lRis~~---~~~~~~~l~~al~~~ 379 (380)
T PLN03026 303 LFGLLKEVPFLEPYPSDANFILCRVTSGRDAKKLKEDLAKMGVMVRHYNSKELKGYIRVSVG---KPEHTDALMEALKQL 379 (380)
T ss_pred HHHHHHHCCCCeECCCCCeEEEEECCCCCCHHHHHHHHHHCCeEEEECCCCCCCCEEEEecC---CHHHHHHHHHHHHHh
Confidence 999999887655556677888887652 23332 233331 1 2368999986 788999999999753
No 148
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.86 E-value=6.9e-19 Score=181.58 Aligned_cols=290 Identities=12% Similarity=-0.008 Sum_probs=196.5
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCC
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLI 215 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~ 215 (476)
+..++++++.+++.+ .+...+...+++|+|+++++..++.+... +++.|++++++|..+...++..|++++.++++.
T Consensus 74 g~~~lr~aia~~~~~-~~~~~~~~~i~~t~G~~~al~~~~~~l~~--~gd~v~i~~P~y~~~~~~~~~~g~~v~~~~~~~ 150 (401)
T TIGR01264 74 GALSAREAIASYYHN-PDGPIEADDVVLCSGCSHAIEMCIAALAN--AGQNILVPRPGFPLYETLAESMGIEVKLYNLLP 150 (401)
T ss_pred CCHHHHHHHHHHHhh-cCCCCCHHHEEECcChHHHHHHHHHHhCC--CCCEEEEeCCCChhHHHHHHHcCCEEEEeecCC
Confidence 556888888888876 34333344689999999999988887765 899999999999999999999999999998753
Q ss_pred --CCccCHHHHHHHHHcCCCCcEEEEEeeCCCcccccc---CHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCC
Q 011842 216 --SGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVD---DLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAP 290 (476)
Q Consensus 216 --~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id---~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~ 290 (476)
++.+|++.|++.+.++++ +|++++++|+||.+. ++++|+++|+++|+ ++++|++|..+.+......+
T Consensus 151 ~~~~~~d~~~l~~~~~~~~~---~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~-----~ii~De~y~~~~~~~~~~~~ 222 (401)
T TIGR01264 151 DKSWEIDLKQLESLIDEKTA---ALIVNNPSNPCGSVFSRQHLEEILAVAERQCL-----PIIADEIYGDMVFSGATFEP 222 (401)
T ss_pred ccCCCCCHHHHHHHhccCce---EEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCC-----EEEEEhhhhhhccCCccccc
Confidence 468999999998876554 677888999999985 48899999999999 99999999876543211111
Q ss_pred CCCCcccc-cEEEEcCCC-CCCCCCCceeEEeehh------hhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhC
Q 011842 291 KVSFKKPI-GSVSVSGHK-FVGCPMPCGVQITRME------HINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKG 362 (476)
Q Consensus 291 ~~~~~~~~-Dsi~~s~hK-~l~~p~~~G~l~~~~~------~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g 362 (476)
........ -+++.|+.| |+..++++|++++.++ .++.+...... ..+.+ .+.+.++...+.
T Consensus 223 ~~~~~~~~~vi~~~SfSK~~~~~GlRiG~iv~~~~~~~~~~~~~~~~~~~~~--------~~~~~---~~~q~a~~~~l~ 291 (401)
T TIGR01264 223 LASLSSTVPILSCGGLAKRWLVPGWRLGWIIIHDRRGILRDIRDGLVKLSQR--------ILGPC---TIVQGALPSILL 291 (401)
T ss_pred HHHcCCCCcEEEEccCcccCCCccceEEEEEecCcchhHHHHHHHHHHHhhc--------cCCCC---cHHHHHHHHHHH
Confidence 11221111 256678889 5888999999998741 22222111000 00011 233333333331
Q ss_pred ---hhcHHHHHHHHHHHHHHHHHHHHhc-CCeEeecCCeeEEEEecC--------CcHHH----hh--ceeecc-----c
Q 011842 363 ---YKGFQKEVQKCLRNAHYLKDRLLDA-GISAMLNELSSTVVFERP--------QDEEF----VR--RWQLAC-----Q 419 (476)
Q Consensus 363 ---~~g~~~~~~~~~~~a~~l~~~L~~~-g~~~~~~~~~~iv~f~~~--------~~~~~----~~--~~~l~~-----~ 419 (476)
.+-+++.++++.++++++.+.|++. ++....+..++.+.+..+ .+.++ .+ +..+.. .
T Consensus 292 ~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gI~v~pg~~f~~ 371 (401)
T TIGR01264 292 RTPQEYFDGTLSVLESNAMLCYGALAAVPGLRPVMPSGAMYMMVGIEMEHFPEFKNDVEFTERLVAEQSVFCLPGSCFEY 371 (401)
T ss_pred hCcHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeeEEEEEecccccCCCCCHHHHHHHHHHhCCEEEeCchhcCC
Confidence 2446667778888889999999987 433233445555555532 12222 21 233321 2
Q ss_pred CCEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Q 011842 420 GNIAHVVVMPNVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 420 ~~~lRv~~~~~~T~edid~~~~~l~~~~~~ 449 (476)
.+.+|+++.. ..++++..++.|.+..++
T Consensus 372 ~~~iRis~~~--~~~~l~~~l~rl~~~~~~ 399 (401)
T TIGR01264 372 PGFFRVVLTV--PVVMMEEACSRIQEFCER 399 (401)
T ss_pred CCeEEEEEcC--CHHHHHHHHHHHHHHHhc
Confidence 4789999873 578999988888877654
No 149
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.86 E-value=8e-20 Score=185.77 Aligned_cols=271 Identities=12% Similarity=0.053 Sum_probs=185.1
Q ss_pred HHHHHHHHHcCCCCCcccEEE-cCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccCH
Q 011842 143 GVLDWFARLWELENNEYWGYI-TNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGEIDC 221 (476)
Q Consensus 143 ~~~~~la~l~g~~~~~~~g~~-t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~ 221 (476)
++++.+++++|++++ ..++ |+|+++++..++.+... |++.|+++.+.|..+...++..|++++.++.+.++.+|+
T Consensus 73 ~lr~~ia~~~~~~~~--~i~~~~~Ga~~~i~~~~~~~~~--~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~ 148 (361)
T PRK00950 73 ELREALSKYTGVPVE--NIIVGGDGMDEVIDTLMRTFID--PGDEVIIPTPTFSYYEISAKAHGAKPVYAKREEDFSLDV 148 (361)
T ss_pred HHHHHHHHHhCCCHH--HEEEeCCCHHHHHHHHHHHhcC--CCCEEEEcCCChHHHHHHHHHcCCEEEEeecCCCCCcCH
Confidence 344446666788653 4777 66777777777666544 889999999998888888999999999999877779999
Q ss_pred HHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCcccccEE
Q 011842 222 ADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKPIGSV 301 (476)
Q Consensus 222 ~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~~Dsi 301 (476)
++|++.+..+++ ++++++++++||.+.|+++|.++|+++|+ ++++|++|+.+.. ....+....... -++
T Consensus 149 ~~l~~~~~~~~~---~v~~~~p~nptG~~~~~~~l~~l~~~~~~-----~li~De~y~~~~~--~~~~~~~~~~~~-vi~ 217 (361)
T PRK00950 149 DSVLNAITEKTK---VIFLCTPNNPTGNLIPEEDIRKILESTDA-----LVFVDEAYVEFAE--YDYTPLALEYDN-LII 217 (361)
T ss_pred HHHHHHhccCCC---EEEEeCCCCCCCCCcCHHHHHHHHHHCCc-----EEEEECchhhhCc--cchHHHHHhcCC-EEE
Confidence 999999865544 77778999999999999999999999999 9999999975431 111110110011 245
Q ss_pred EEcCCCCCC-CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhc-HHHHHHHHHHHHHH
Q 011842 302 SVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKG-FQKEVQKCLRNAHY 379 (476)
Q Consensus 302 ~~s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g-~~~~~~~~~~~a~~ 379 (476)
..|++|.++ .++++|+++.++++++.+.....+. . ...+.+.+++..+...+ +++..++..+++++
T Consensus 218 ~~S~SK~~g~~GlRiG~~~~~~~~~~~~~~~~~~~-------~-----~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~ 285 (361)
T PRK00950 218 GRTFSKVFGLAGLRIGYGFVPEWLIDYYMRAKTPF-------S-----LTRLSQAAAIAALSDKEYIEKSIEHGIKSREY 285 (361)
T ss_pred EEeehHhhcCchhhcchhcCCHHHHHHHHHhcCCC-------C-----CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 678889886 6789999999888765553221111 1 11344444455443322 55666666677777
Q ss_pred HHHHHHhcCCeEeecCCeeEEEEecCC--cHHHh-----hceee-cc------cCCEEEEEEcCCCCHHHHHHHHHHHHH
Q 011842 380 LKDRLLDAGISAMLNELSSTVVFERPQ--DEEFV-----RRWQL-AC------QGNIAHVVVMPNVTIDKLDDFLNELIE 445 (476)
Q Consensus 380 l~~~L~~~g~~~~~~~~~~iv~f~~~~--~~~~~-----~~~~l-~~------~~~~lRv~~~~~~T~edid~~~~~l~~ 445 (476)
+.+.|+ + .+.++.++++.+..+. ..++. ++..+ ++ ..+.+|++++ +.+++++++++|++
T Consensus 286 l~~~l~---~-~~~~~~~~~i~~~~~~~~~~~~~~~l~~~gv~v~~~~~f~~~~~~~lRis~~---~~~~~~~l~~~L~~ 358 (361)
T PRK00950 286 LYNELP---F-KVYPSEANFVLVDVTPMTAKEFCEELLKRGVIVRDCTSFRGLGDYYIRVSIG---TFEENERFLEILKE 358 (361)
T ss_pred HHhhcC---e-eECCCcceEEEEECCCCCHHHHHHHHHHCCEEEeeCCccCCCCCCeEEEECC---CHHHHHHHHHHHHH
Confidence 776664 2 2345566777666542 23332 23333 11 1357999986 78899999999987
Q ss_pred HH
Q 011842 446 NR 447 (476)
Q Consensus 446 ~~ 447 (476)
+.
T Consensus 359 il 360 (361)
T PRK00950 359 IV 360 (361)
T ss_pred Hh
Confidence 64
No 150
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.86 E-value=1.1e-18 Score=179.73 Aligned_cols=293 Identities=12% Similarity=0.032 Sum_probs=196.1
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCC
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLI 215 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~ 215 (476)
+..++++.+.+++.+..+...++..+++|+|+++++..++.+... +++.|++++++|..+...++..|++++.+++++
T Consensus 74 g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~--~gd~Vli~~p~~~~~~~~~~~~g~~v~~v~~~~ 151 (394)
T PRK06836 74 GYPEVREAIAESLNRRFGTPLTADHIVMTCGAAGALNVALKAILN--PGDEVIVFAPYFVEYRFYVDNHGGKLVVVPTDT 151 (394)
T ss_pred CCHHHHHHHHHHHHHHhCCCCCcCcEEEeCChHHHHHHHHHHhcC--CCCEEEEcCCCCccHHHHHHHcCCEEEEEecCC
Confidence 567888999999988766643344699999999999888877755 899999999999999999999999999999976
Q ss_pred C-CccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHH------hCCCCCceEEEEecCcccccccc
Q 011842 216 S-GEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEE------SGFTQDRFYIHCDGALFGLMMPF 285 (476)
Q Consensus 216 ~-g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~------~g~~~~~~~lhvD~a~~g~~~~~ 285 (476)
+ +.+|+++|++++.++++ +|++++++|+||.+.| +++|+++|++ ||+ ++++|++|..+....
T Consensus 152 ~~~~~d~~~l~~~~~~~~~---~v~~~~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~-----~ii~De~y~~~~~~~ 223 (394)
T PRK06836 152 DTFQPDLDALEAAITPKTK---AVIINSPNNPTGVVYSEETLKALAALLEEKSKEYGRPI-----YLISDEPYREIVYDG 223 (394)
T ss_pred ccCcCCHHHHHhhcCcCce---EEEEeCCCCCCCcCCCHHHHHHHHHHHHHhhhccCCCe-----EEEEeccccccccCC
Confidence 5 78999999999976554 7778889999999866 6777788888 899 999999997654422
Q ss_pred cccCCCCCCcccccEEEEcCCCCCC-CCCCceeEEeehhhhhh--hcCCccccCCCCCcccCCCCChhHHHHHHHHHHhC
Q 011842 286 VKKAPKVSFKKPIGSVSVSGHKFVG-CPMPCGVQITRMEHINV--LSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKG 362 (476)
Q Consensus 286 ~~~~~~~~~~~~~Dsi~~s~hK~l~-~p~~~G~l~~~~~~~~~--l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g 362 (476)
..........+ -.++..|+.|.++ .+.++|+++++++..+. +.....+... . .+.- ....+.+.+....+.
T Consensus 224 ~~~~~~~~~~~-~~i~~~S~SK~~~~pGlRiG~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~-~~~~~~q~~~~~~l~ 297 (394)
T PRK06836 224 AEVPYIFKYYD-NSIVVYSFSKSLSLPGERIGYIAVNPEMEDADDLVAALVFANR--I--LGFV-NAPALMQRVVAKCLD 297 (394)
T ss_pred CCCCChHHccC-cEEEEecchhhccCcceeeEEEecCHHHhhhHHHHHHHHHHhh--c--cccc-cCCHHHHHHHHHHhC
Confidence 11111111111 2467788999887 78899999998764221 1000000000 0 0000 011233444333332
Q ss_pred hhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecCC--cHHHh-----hceeeccc-----CCEEEEEEcCC
Q 011842 363 YKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERPQ--DEEFV-----RRWQLACQ-----GNIAHVVVMPN 430 (476)
Q Consensus 363 ~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~--~~~~~-----~~~~l~~~-----~~~lRv~~~~~ 430 (476)
. + ...++..++++.+.+.|++.|+....+.....++...+. ..++. .++.+... .+.+|+++.
T Consensus 298 ~-~--~~~~~~~~~r~~l~~~L~~~g~~~~~~~gg~~~~~~~~~~~~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~~~-- 372 (394)
T PRK06836 298 A-T--VDVSIYKRNRDLLYDGLTELGFECVKPQGAFYLFPKSPEEDDVAFCEKAKKHNLLLVPGSGFGCPGYFRLSYC-- 372 (394)
T ss_pred C-h--HHHHHHHHHHHHHHHHHHhCCCEeecCCceEEEEEeCCCCCHHHHHHHHHhCCEEEECchhcCCCCeEEEEec--
Confidence 2 2 124455667788888998887643333333344444442 22222 12333222 468999997
Q ss_pred CCHHHHHHHHHHHHHHHHH
Q 011842 431 VTIDKLDDFLNELIENRST 449 (476)
Q Consensus 431 ~T~edid~~~~~l~~~~~~ 449 (476)
.++++++..+..|+++.+.
T Consensus 373 ~~~~~~~~~i~~l~~~l~~ 391 (394)
T PRK06836 373 VDTETIERSLPAFEKLAKE 391 (394)
T ss_pred CCHHHHHHHHHHHHHHHHH
Confidence 5799999999999888754
No 151
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.86 E-value=6.1e-19 Score=179.96 Aligned_cols=278 Identities=11% Similarity=-0.040 Sum_probs=193.4
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCc
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGE 218 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~ 218 (476)
+++++++ ++++++++ ++++|+|+++++..++.+..+ ||+.|++++++|..+...++..|++++.+|.+.+ .
T Consensus 71 ~Lr~~ia----~~~~~~~~--~I~it~G~~~~l~~~~~~~~~--~gd~vlv~~p~y~~~~~~~~~~g~~~~~vp~~~~-~ 141 (369)
T PRK08153 71 DLRHALA----AHHGVAPE--NIMVGEGIDGLLGLIVRLYVE--PGDPVVTSLGAYPTFNYHVAGFGGRLVTVPYRDD-R 141 (369)
T ss_pred HHHHHHH----HHhCCCHH--HEEEcCCHHHHHHHHHHHhcC--CCCEEEECCCcchHHHHHHHHcCCeEEEeeCCCC-C
Confidence 5555544 45577643 599999999998888777665 8999999999999999888999999999998655 4
Q ss_pred cCHHHHHHHHHc-CCCCcEEEEEeeCCCccccccCHHHHHHHHHHh--CCCCCceEEEEecCcccccccccccCCCCCCc
Q 011842 219 IDCADFKAKLLQ-NKDKPAIINVNIGTTVKGAVDDLDLVIQTLEES--GFTQDRFYIHCDGALFGLMMPFVKKAPKVSFK 295 (476)
Q Consensus 219 ~D~~~Le~~l~~-~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~--g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~ 295 (476)
+|++++++.+.. +++ +++++++.|+||.+-+.+++.++++.+ ++ ||++|++|+.+.... ... .+...
T Consensus 142 ~~~~~l~~~~~~~~~~---~i~l~~P~NPtG~~~~~~~l~~l~~~~~~~~-----~lI~DE~y~~~~~~~-~~~-~~~~~ 211 (369)
T PRK08153 142 EDLDALLDAARRENAP---LVYLANPDNPMGSWHPAADIVAFIEALPETT-----LLVLDEAYCETAPAG-AAP-PIDTD 211 (369)
T ss_pred CCHHHHHHHhcccCCc---EEEEeCCCCCCCCCCCHHHHHHHHHhCCCCc-----EEEEeCchhhhcCcc-cch-hhhhc
Confidence 899998877653 343 677788999999999988888888754 77 999999997554321 111 11111
Q ss_pred ccccEEEEcCCCCCC-CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhCh-hcHHHHHHHH
Q 011842 296 KPIGSVSVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGY-KGFQKEVQKC 373 (476)
Q Consensus 296 ~~~Dsi~~s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~-~g~~~~~~~~ 373 (476)
..-.++..++.|.++ +++++|+++.++++++.+.....+. . ...+.++++...+.. +-+++..+..
T Consensus 212 ~~~~i~~~SfSK~~g~~GlRiG~~v~~~~~~~~l~~~~~~~-------~-----~s~~~q~~~~~~l~~~~~~~~~~~~~ 279 (369)
T PRK08153 212 DPNVIRMRTFSKAYGLAGARVGYAIGAPGTIKAFDKVRNHF-------G-----MNRIAQAAALAALKDQAYLAEVVGKI 279 (369)
T ss_pred CCCEEEEecchHhccCcchheeeeecCHHHHHHHHHhhcCC-------C-----CCHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 112356778889886 8899999999887766553322111 1 123455555555532 2355666777
Q ss_pred HHHHHHHHHHHHhcCCeEeecCCeeEEEEecCC----cHHHh-----hceeec-c----cCCEEEEEEcCCCCHHHHHHH
Q 011842 374 LRNAHYLKDRLLDAGISAMLNELSSTVVFERPQ----DEEFV-----RRWQLA-C----QGNIAHVVVMPNVTIDKLDDF 439 (476)
Q Consensus 374 ~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~----~~~~~-----~~~~l~-~----~~~~lRv~~~~~~T~edid~~ 439 (476)
.++++++.+.|++.|+. ..++.++++.+..+. ...+. +++.+. . ..+++|+++. +++++++|
T Consensus 280 ~~~r~~~~~~L~~~g~~-~~p~~~~f~~~~~~~~~~~a~~l~~~l~~~Gi~v~~p~~~~~~~~iRis~~---~~~~~~~~ 355 (369)
T PRK08153 280 AAARDRIAAIARANGLT-PLPSATNFVAIDCGRDGAFARAVLDGLIARDIFVRMPGVAPLDRCIRVSCG---PDEELDLF 355 (369)
T ss_pred HHHHHHHHHHHHHCCCc-cCCCcCcEEEEECCCCcccHHHHHHHHHHCCeEEeeCCCCCCCCeEEEecC---CHHHHHHH
Confidence 78888899999988864 345566776666542 12222 344441 1 2368999886 79999999
Q ss_pred HHHHHHHHHHHH
Q 011842 440 LNELIENRSTWY 451 (476)
Q Consensus 440 ~~~l~~~~~~~~ 451 (476)
+++|+++.....
T Consensus 356 ~~al~~~~~~~~ 367 (369)
T PRK08153 356 AEALPEALEAAR 367 (369)
T ss_pred HHHHHHHHHHhh
Confidence 999999876543
No 152
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.86 E-value=2.5e-19 Score=182.54 Aligned_cols=275 Identities=13% Similarity=0.014 Sum_probs=193.1
Q ss_pred HHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccCHHH
Q 011842 144 VLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCAD 223 (476)
Q Consensus 144 ~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~~~ 223 (476)
+++.+++++|++++ .+++|+|+++++...+.+... +++.|++++++|..+...++..|++++.+|.+ ++.+|+++
T Consensus 72 lr~~ia~~~~~~~~--~i~~t~G~~~~l~~~~~~l~~--~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~-~~~~~~~~ 146 (367)
T PRK02731 72 LKAALAEKFGVDPE--RIILGNGSDEILELLARAYLG--PGDEVIYSEHGFAVYPIAAQAVGAKPVEVPAK-DYGHDLDA 146 (367)
T ss_pred HHHHHHHHhCcCHH--HEEEcCCHHHHHHHHHHHhcC--CCCEEEEecCCHHHHHHHHHHcCCeEEEeccc-CCCCCHHH
Confidence 44446666787643 489999999987776666544 88999999999988888888999999999984 57899999
Q ss_pred HHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHh--CCCCCceEEEEecCcccccccccccCCCCCCcc-c-cc
Q 011842 224 FKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEES--GFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKK-P-IG 299 (476)
Q Consensus 224 Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~--g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~-~-~D 299 (476)
|++.+.++++ +|++++++++||.+.++++|.++++.+ |+ |+++|++|..+........ .+.... . -.
T Consensus 147 l~~~~~~~~~---~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~-----~li~De~y~~~~~~~~~~~-~~~~~~~~~~~ 217 (367)
T PRK02731 147 MLAAVTPRTR---LVFIANPNNPTGTYLPAEEVERFLAGVPPDV-----LVVLDEAYAEYVRRKDYED-GLELVAKFPNV 217 (367)
T ss_pred HHHHhCCCCc---EEEEeCCCCCCCcCCCHHHHHHHHHhCCCCc-----EEEEECcHHHhccCcCccc-HHHHHhhcCCE
Confidence 9999975544 777889999999999999999999875 77 9999999876543211111 111111 1 23
Q ss_pred EEEEcCCCCCC-CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChh-cHHHHHHHHHHHH
Q 011842 300 SVSVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYK-GFQKEVQKCLRNA 377 (476)
Q Consensus 300 si~~s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~-g~~~~~~~~~~~a 377 (476)
++..++.|.++ .++++|++++++++++.+...... +.. ..+.++++...+... .+++..++..++.
T Consensus 218 i~~~S~SK~~g~~G~RiG~l~~~~~~~~~l~~~~~~-------~~~-----~~~~~~~a~~~l~~~~~~~~~~~~~~~~~ 285 (367)
T PRK02731 218 VVTRTFSKAYGLAGLRVGYGIAPPEIIDALNRVRQP-------FNV-----NSLALAAAVAALDDDAFVEKSRALNAEGM 285 (367)
T ss_pred EEEeeehHhhcCcccceeeeeCCHHHHHHHHHccCC-------CCC-----CHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 45567889775 678999999998876655422111 111 235566666655433 3566777778888
Q ss_pred HHHHHHHHhcCCeEeecCCeeEEEEecCC---cHHHh-----hceeeccc-----CCEEEEEEcCCCCHHHHHHHHHHHH
Q 011842 378 HYLKDRLLDAGISAMLNELSSTVVFERPQ---DEEFV-----RRWQLACQ-----GNIAHVVVMPNVTIDKLDDFLNELI 444 (476)
Q Consensus 378 ~~l~~~L~~~g~~~~~~~~~~iv~f~~~~---~~~~~-----~~~~l~~~-----~~~lRv~~~~~~T~edid~~~~~l~ 444 (476)
+++.+.|++.|+.. .++.++++.+..++ ..++. ++..+... .+.+|++++ +.+++++|+++|+
T Consensus 286 ~~l~~~L~~~g~~~-~~~~g~~~~i~~~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~e~~~l~~aL~ 361 (367)
T PRK02731 286 AWLTEFLAELGLEY-IPSVGNFILVDFDDGKDAAEAYQALLKRGVIVRPVAGYGLPNALRITIG---TEEENRRFLAALK 361 (367)
T ss_pred HHHHHHHHHCCCcc-CCCCceEEEEECCCCCCHHHHHHHHHHCCEEEEeCCCCCCCCeEEEecC---CHHHHHHHHHHHH
Confidence 99999999887644 35566777777642 22332 22333211 367999985 7899999999998
Q ss_pred HHHH
Q 011842 445 ENRS 448 (476)
Q Consensus 445 ~~~~ 448 (476)
++.+
T Consensus 362 ~~~~ 365 (367)
T PRK02731 362 EFLA 365 (367)
T ss_pred HHHh
Confidence 8753
No 153
>PRK07908 hypothetical protein; Provisional
Probab=99.85 E-value=5.8e-19 Score=178.73 Aligned_cols=266 Identities=12% Similarity=0.002 Sum_probs=179.8
Q ss_pred HHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccCHHHH
Q 011842 145 LDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCADF 224 (476)
Q Consensus 145 ~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~~~L 224 (476)
++.+++.+|++++ ++++|+|+++++..++. .. |++ +++..+++..+...++..|++++.+|+++++.+|++.+
T Consensus 64 r~aia~~~~~~~~--~I~it~Ga~~al~~~~~--l~--~~~-viv~~P~y~~~~~~~~~~G~~i~~v~~~~~~~~d~~~l 136 (349)
T PRK07908 64 RAAVAARHGRTPD--EVLLLAGAAEGFALLAR--LR--PRR-AAVVHPSFTEPEAALRAAGIPVHRVVLDPPFRLDPAAV 136 (349)
T ss_pred HHHHHHHhCcChh--hEEECCCHHHHHHHHHh--cC--CCe-EEEeCCCChHHHHHHHHcCCEEEeeccCcccCcChhHh
Confidence 3445555677653 59999999999987766 22 654 45567888888889999999999999987788898855
Q ss_pred HHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCcccccEEE-E
Q 011842 225 KAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKPIGSVS-V 303 (476)
Q Consensus 225 e~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~~Dsi~-~ 303 (476)
.++++ ++++++++|+||.+.+.++|.++|++ +. ++++|++|+.++ +. ...+.... ..-+++. .
T Consensus 137 ----~~~~~---~i~l~np~NPTG~~~~~~~l~~l~~~-~~-----~iIvDe~y~~~~-~~-~~~~l~~~-~~~~~i~i~ 200 (349)
T PRK07908 137 ----PDDAD---LVVIGNPTNPTSVLHPAEQLLALRRP-GR-----ILVVDEAFADAV-PG-EPESLAGD-DLPGVLVLR 200 (349)
T ss_pred ----ccCCC---EEEEcCCCCCCCCCcCHHHHHHHHhc-CC-----EEEEECcchhhc-cC-Cccccccc-cCCCEEEEe
Confidence 33343 77778999999999999999999974 77 899999997543 21 11111111 1124444 4
Q ss_pred cCCCCCC-CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHh---ChhcHHHHHHHHHHHHHH
Q 011842 304 SGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRK---GYKGFQKEVQKCLRNAHY 379 (476)
Q Consensus 304 s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~---g~~g~~~~~~~~~~~a~~ 379 (476)
|++|.++ +++++|+++.++++++.+....... ..+ .+.+.+....+ ....+++..++..+++++
T Consensus 201 S~SK~~~l~GlRiG~~~~~~~~~~~~~~~~~~~-------~~~-----~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~ 268 (349)
T PRK07908 201 SLTKTWSLAGLRVGYALGAPDVLARLTRGRAHW-------PVG-----TLQLEAIAACCAPRAVAEAAADAARLAADRAE 268 (349)
T ss_pred ecccccCCccceeeeeecCHHHHHHHHhcCCCC-------Ccc-----HHHHHHHHHHhcccchHHHHHHHHHHHHHHHH
Confidence 8899775 8899999999888776654321111 001 11222211111 123456677888889999
Q ss_pred HHHHHHhcCCeEeecCCeeEEEEecCCcHHHh-----hceeecc-------cCCEEEEEEcCCCCHHHHHHHHHHHHHHH
Q 011842 380 LKDRLLDAGISAMLNELSSTVVFERPQDEEFV-----RRWQLAC-------QGNIAHVVVMPNVTIDKLDDFLNELIENR 447 (476)
Q Consensus 380 l~~~L~~~g~~~~~~~~~~iv~f~~~~~~~~~-----~~~~l~~-------~~~~lRv~~~~~~T~edid~~~~~l~~~~ 447 (476)
+.+.|++.++....++.++.+.+..++.+.+. +++.+.. ..+++|+++ .+++++++|+++|+++.
T Consensus 269 l~~~L~~~~~~~~~p~~g~~~~~~~~~~~~~~~~l~~~gI~v~~g~~f~~~~~~~vRis~---~~~~~~~~l~~al~~~~ 345 (349)
T PRK07908 269 MVAGLRAVGARVVDPAAAPFVLVRVPDAELLRKRLRERGIAVRRGDTFPGLDPDYLRLAV---RPRAEVPVLVQALAEIL 345 (349)
T ss_pred HHHHHHhCCcEeccCCCceEEEEECCcHHHHHHHHHhCCEEEEECCCCCCCCCCeEEEEe---CCCccHHHHHHHHHHHH
Confidence 99999988754444466777777776543332 2233321 246899998 47899999999998764
Q ss_pred H
Q 011842 448 S 448 (476)
Q Consensus 448 ~ 448 (476)
.
T Consensus 346 ~ 346 (349)
T PRK07908 346 K 346 (349)
T ss_pred h
Confidence 3
No 154
>PRK06855 aminotransferase; Validated
Probab=99.85 E-value=1.1e-18 Score=181.61 Aligned_cols=294 Identities=12% Similarity=-0.037 Sum_probs=194.7
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHH-HHcCCeEEEEeCC
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAA-RMYRMECVKVDCL 214 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~-~~~G~~v~~v~~~ 214 (476)
+..++++++.+|+.+..|++.+..++++|+|+++|+..++. +.. ||+.|++.+++|..+..+. ...|++++.+|++
T Consensus 74 G~~~LReaia~~~~~~~g~~~~~~~I~it~G~~~al~~~~~-l~~--~Gd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~ 150 (433)
T PRK06855 74 GVLETREFLAELNNKRGGAQITPDDIIFFNGLGDAIAKIYG-LLR--REARVIGPSPAYSTHSSAEAAHAGYPPVTYRLD 150 (433)
T ss_pred CCHHHHHHHHHHHHhccCCCCCHhHEEEcCcHHHHHHHHHH-hcC--CCCeEEEeCCCCchHHHHHHHhcCCeEEEEecc
Confidence 56799999999999987876555579999999999988764 444 8999999999998766443 3458888999987
Q ss_pred C--CCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCcccccccccccC
Q 011842 215 I--SGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKA 289 (476)
Q Consensus 215 ~--~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~ 289 (476)
+ ++.+|+++|++++....+ +.+++++++.|+||.+-+ +++|+++|++||+ ||++|++|+.+.+......
T Consensus 151 ~~~~~~~d~~~l~~~~~~~~~-~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~-----~II~De~Y~~l~~~~~~~~ 224 (433)
T PRK06855 151 PENNWYPDLDDLENKVKYNPS-IAGILLINPDNPTGAVYPKEILREIVDIAREYDL-----FIICDEIYNNIVYNGKKTV 224 (433)
T ss_pred cccCCCCCHHHHHHHHhcCCC-ceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCC-----EEEEeccccccccCCCCCC
Confidence 4 356899999999974322 236667789999999965 6788888999999 9999999987765322222
Q ss_pred CCCCCc-ccccEEEEcCCCCCC-CCCCceeEEeeh----h----hhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHH
Q 011842 290 PKVSFK-KPIGSVSVSGHKFVG-CPMPCGVQITRM----E----HINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLN 359 (476)
Q Consensus 290 ~~~~~~-~~~Dsi~~s~hK~l~-~p~~~G~l~~~~----~----~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~ 359 (476)
+..... +.-.++..|+.|.++ +++++||+++++ + .++.+. .+.. ...+ ...+.+.++..
T Consensus 225 sl~~~~~~~~~I~~~S~SK~~~~pGlRiG~ii~p~~~~~~~~~~~~~~~~---~~~~-----~~~~---~~~~~Q~a~~~ 293 (433)
T PRK06855 225 PLSEVIGDVPGIALKGISKELPWPGSRCGWIEVYNADKDEVFKKYINSIL---NAKM-----IEVC---STTLPQMAIPR 293 (433)
T ss_pred CHHHHcCcCCeEEEecCccccCCCcceEEEEEEeCCchhhHHHHHHHHHH---Hhhc-----cccC---CChHHHHHHHH
Confidence 211221 111256788899884 899999999842 1 122221 1100 0011 12345555555
Q ss_pred HhCh----hcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCe-eEEEEecCCc---------------------------
Q 011842 360 RKGY----KGFQKEVQKCLRNAHYLKDRLLDAGISAMLNELS-STVVFERPQD--------------------------- 407 (476)
Q Consensus 360 ~~g~----~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~-~iv~f~~~~~--------------------------- 407 (476)
.+.. +-+++..+.+.++++.+.+.|++.+...+.+|.. ..+.+..++.
T Consensus 294 ~l~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (433)
T PRK06855 294 IMSHPEYKNYLKERNKRYEKRSNIAYEKLKDVPGLKVNRTNGAFYMTVVFEDGVLNNKQSLPIENPEVKEYVEGLVKGPV 373 (433)
T ss_pred hhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeccCCCeeEEEeeccccccccccccCCcchhhhHHHHHHHHhcCC
Confidence 5532 2355666677788888999998763333444544 4444444421
Q ss_pred ---HHHh----h--ceee-c-----ccCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 011842 408 ---EEFV----R--RWQL-A-----CQGNIAHVVVMPNVTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 408 ---~~~~----~--~~~l-~-----~~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~ 450 (476)
.++. . +..+ + ..+..+|+++.. .+.++|+..++.|.++.++.
T Consensus 374 ~~~~~~~~~l~~~~gV~v~PG~~F~~~~~~~Rls~~~-~~~~~i~~~~~~l~~~~~~~ 430 (433)
T PRK06855 374 SPDKRFVYYLLASTGICVVPLSSFCTELNGFRVTLLE-RDEEKFEWIYQTLAEKIEEY 430 (433)
T ss_pred CchHHHHHHHHHHcCEEEecCCcCCCCCCceEEEECC-CcHHHHHHHHHHHHHHHHHH
Confidence 1222 1 1222 1 123458999875 57999999999998887653
No 155
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.85 E-value=4.8e-19 Score=180.33 Aligned_cols=276 Identities=11% Similarity=-0.003 Sum_probs=192.3
Q ss_pred HHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCC
Q 011842 138 RQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISG 217 (476)
Q Consensus 138 ~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g 217 (476)
.+++++ +++++|++++ ++++|+|+++++..++.+..+ ||+.|+++.++|..+...++..|++++.||.+ ++
T Consensus 67 ~~Lr~a----ia~~~~~~~~--~I~vt~Gs~e~i~~~~~~l~~--~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~-~~ 137 (366)
T PRK01533 67 TTLRQT----IANKLHVKME--QVLCGSGLDEVIQIISRAVLK--AGDNIVTAGATFPQYRHHAIIEGCEVKEVALN-NG 137 (366)
T ss_pred HHHHHH----HHHHhCCCcc--eEEECCCHHHHHHHHHHHhcC--CCCEEEEcCCcHHHHHHHHHHcCCEEEEeecC-CC
Confidence 355555 4555688754 599999999999988888765 89999999999999999999999999999986 56
Q ss_pred ccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHH---HhCCCCCceEEEEecCcccccccccccCCCCCC
Q 011842 218 EIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLE---ESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSF 294 (476)
Q Consensus 218 ~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~---~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~ 294 (476)
.+|+++|++++.++++ ++++++++|+||.+-+.+++.++++ +++ ++++|++|..+.... ...+.+..
T Consensus 138 ~~d~~~l~~~~~~~~~---~v~i~~P~NPTG~~~~~~~l~~l~~~~~~~~------~~iiDe~y~~~~~~~-~~~~~~~~ 207 (366)
T PRK01533 138 VYDLDEISSVVDNDTK---IVWICNPNNPTGTYVNDRKLTQFIEGISENT------LIVIDEAYYEYVTAK-DFPETLPL 207 (366)
T ss_pred CcCHHHHHHHhCcCCc---EEEEeCCCCCCCCCcCHHHHHHHHHhCCCCC------EEEEEccHHHhhccc-cCcchhHH
Confidence 7999999999876554 7778899999999988777766665 333 577899997543321 11111111
Q ss_pred cc--cccEEEEcCCCCCC-CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhc-HHHHH
Q 011842 295 KK--PIGSVSVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKG-FQKEV 370 (476)
Q Consensus 295 ~~--~~Dsi~~s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g-~~~~~ 370 (476)
.. .-.++..|+.|.++ +++++|++++++++++.+..... . .+ ...+.+.++...+.... .++..
T Consensus 208 ~~~~~~vi~~~SfSK~~~l~GlRiG~~i~~~~~~~~l~~~~~-------~--~~---~~~~~q~aa~~~l~~~~~~~~~~ 275 (366)
T PRK01533 208 LEKHKNILVLRTFSKAYGLASFRVGYAVGHEELIEKLNVVRL-------P--FN---VSSLAQKAATIAFGDDEFIEEIV 275 (366)
T ss_pred hccCCCEEEEeCchHHhcChHHHHhHHhCCHHHHHHHHHhcC-------C--CC---cCHHHHHHHHHHhCCHHHHHHHH
Confidence 11 12356678899875 89999999998877766532211 0 11 22456666666654333 34455
Q ss_pred HHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecCCcHHHh-----hceeecccCCEEEEEEcCCCCHHHHHHHHHHHHH
Q 011842 371 QKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERPQDEEFV-----RRWQLACQGNIAHVVVMPNVTIDKLDDFLNELIE 445 (476)
Q Consensus 371 ~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~~~~~~-----~~~~l~~~~~~lRv~~~~~~T~edid~~~~~l~~ 445 (476)
+...+.++++.+.++..|+. +.++.++.+.+..++..++. +++.+..-.+++|+++ -+.++.++|+++|++
T Consensus 276 ~~~~~~r~~~~~~l~~~g~~-~~~~~~nf~~~~~~~~~~~~~~l~~~GI~Vr~~~~~iRis~---~~~~~~~~l~~al~~ 351 (366)
T PRK01533 276 RVNTEGLRQYESFCKENEIP-FYQSQTNFIFLPVENGGEIYEACAHAGFIIRPFPNGVRITV---GTREQNEGVISVLQQ 351 (366)
T ss_pred HHHHHHHHHHHHHHHhCCCc-cCCCcCcEEEEeCCCHHHHHHHHHHCCcEEccCCCceEEeC---CCHHHHHHHHHHHHH
Confidence 66667788888888888764 44566777777766543332 2333322246789987 578999999999987
Q ss_pred HHH
Q 011842 446 NRS 448 (476)
Q Consensus 446 ~~~ 448 (476)
+.+
T Consensus 352 ~~~ 354 (366)
T PRK01533 352 HFE 354 (366)
T ss_pred HHH
Confidence 643
No 156
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.85 E-value=1.3e-19 Score=183.76 Aligned_cols=270 Identities=11% Similarity=0.017 Sum_probs=187.0
Q ss_pred HHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCC-cEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccCHHH
Q 011842 145 LDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPD-GILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCAD 223 (476)
Q Consensus 145 ~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~-~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~~~ 223 (476)
++.+++++|++++ ++++|+|+++++...+.+... |+ +.|+++.++|..+...++..|++++.+|+++++.+|++.
T Consensus 66 r~aia~~~~~~~~--~I~it~Gs~~~i~~~~~~~~~--~g~d~vlv~~P~y~~y~~~~~~~g~~v~~v~~~~~~~~~~~~ 141 (354)
T PRK04635 66 INAYSAYAGVAPE--QILTSRGADEAIELLIRAFCE--PGQDSIACFGPTYGMYAISAETFNVGVKALPLTADYQLPLDY 141 (354)
T ss_pred HHHHHHHhCcCHH--HEEEeCCHHHHHHHHHHHhcC--CCCCeEEEcCCChHHHHHHHHHcCCEEEEEecCCCCCCCHHH
Confidence 3445566788764 599999999999988887654 77 899999999999999999999999999998778899998
Q ss_pred HHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHh-CCCCCceEEEEecCcccccccccccCCCCCCcccccEEE
Q 011842 224 FKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEES-GFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKPIGSVS 302 (476)
Q Consensus 224 Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~-g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~~Dsi~ 302 (476)
++ .+ ++++ +|++++++|+||.+-+.+++.++++.+ ++ +|++|++|..+... ............+ ++.
T Consensus 142 l~-~~-~~~~---li~i~nP~NPTG~~~~~~~l~~l~~~~~~~-----~vivDeay~~~~~~-~s~~~~~~~~~~~-iv~ 209 (354)
T PRK04635 142 IE-QL-DGAK---LVFICNPNNPTGTVIDRADIEQLIEMTPDA-----IVVVDEAYIEFCPE-YSVADLLASYPNL-VVL 209 (354)
T ss_pred HH-hc-cCCC---EEEEeCCCCCCCccCCHHHHHHHHHhCCCc-----EEEEeCchHhhccC-cchHHHHhhCCCE-EEE
Confidence 87 33 3444 788889999999999999999999874 67 99999999654321 1000000111122 467
Q ss_pred EcCCCCCC-CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhC---hhcHHHHHHHHHHHHH
Q 011842 303 VSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKG---YKGFQKEVQKCLRNAH 378 (476)
Q Consensus 303 ~s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g---~~g~~~~~~~~~~~a~ 378 (476)
.|++|+++ +++++|++++++++++.+...... . +. ....+.+++..+. .+.+++.+++..++++
T Consensus 210 ~S~SK~~~l~GlRlG~~i~~~~~~~~l~~~~~~-------~--~~---~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~ 277 (354)
T PRK04635 210 RTLSKAFALAGARCGFTLANEELIEILMRVIAP-------Y--PV---PLPVSEIATQALSEAGLARMKFQVLDLNAQGA 277 (354)
T ss_pred echHHHhhhhHHHHhhhhCCHHHHHHHHhhcCC-------C--CC---CHHHHHHHHHHHhcccHHHHHHHHHHHHHHHH
Confidence 78999986 789999999998877655321110 0 11 1223333444442 2334556677778889
Q ss_pred HHHHHHHhcCCeEeecCCeeEEEEecCCcHHHhh-----ceeec-c----cCCEEEEEEcCCCCHHHHHHHHHHHHH
Q 011842 379 YLKDRLLDAGISAMLNELSSTVVFERPQDEEFVR-----RWQLA-C----QGNIAHVVVMPNVTIDKLDDFLNELIE 445 (476)
Q Consensus 379 ~l~~~L~~~g~~~~~~~~~~iv~f~~~~~~~~~~-----~~~l~-~----~~~~lRv~~~~~~T~edid~~~~~l~~ 445 (476)
++.+.|++.+...+.++..+.+.++.++..++.+ +..+. . ..+.+|+++ .+.+|+++|+++|++
T Consensus 278 ~l~~~L~~~~~~~~~~~~g~f~~~~~~~~~~~~~~l~~~gv~v~~~~~~~~~~~lRis~---~~~e~~~~l~~al~~ 351 (354)
T PRK04635 278 RLQAALSMYGGAKVLEGNGNYVLAKFDDVDAVFKALWDAGIVARAYKDPRLANCIRFSF---SNRAETDKLIGLIRN 351 (354)
T ss_pred HHHHHHHhCCCceECCCCCcEEEEECCCHHHHHHHHHHCCEEEEECCCCCCCCeEEEEe---CCHHHHHHHHHHHHH
Confidence 9999999887334455556666666654433321 22231 1 246899997 489999999999964
No 157
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.85 E-value=2.7e-19 Score=181.82 Aligned_cols=276 Identities=12% Similarity=0.029 Sum_probs=193.8
Q ss_pred hHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCC
Q 011842 137 SRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLIS 216 (476)
Q Consensus 137 ~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~ 216 (476)
..+++++ +++++++++ ..+++|+|+++++...+.+..+ +++.|++++++|..+...+...|++++.+|++ +
T Consensus 66 ~~~lr~~----ia~~~~~~~--~~i~~t~G~~~~l~~~~~~~~~--~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~-~ 136 (359)
T PRK03158 66 APELRTK----VAKHLGVDE--EQLLFGAGLDEVIQMISRALLN--PGTNTVMAEPTFSQYRHNAIIEGAEVREVPLK-D 136 (359)
T ss_pred HHHHHHH----HHHHhCCCH--HHEEECCCHHHHHHHHHHHHhC--CCCEEEEcCCCHHHHHHHHHHcCCeEEEEecC-C
Confidence 3455555 555567764 3599999999999877766655 89999999999999999999999999999997 6
Q ss_pred CccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHH--hCCCCCceEEEEecCcccccccccccCCCCCC
Q 011842 217 GEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEE--SGFTQDRFYIHCDGALFGLMMPFVKKAPKVSF 294 (476)
Q Consensus 217 g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~--~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~ 294 (476)
+.+|++.|++.+.++++ ++++++++|+||.+-+.++|.++++. +|+ ++++|++|+.+....... +.+..
T Consensus 137 ~~~d~~~l~~~~~~~~~---~v~i~~p~NPtG~~~~~~~l~~~~~~~~~~~-----~ii~De~y~~~~~~~~~~-~~~~~ 207 (359)
T PRK03158 137 GGHDLEAMLKAIDEQTK---IVWICNPNNPTGTYVNHEELLSFLESVPSHV-----LVVLDEAYYEYVTAEDYP-DTLPL 207 (359)
T ss_pred CCcCHHHHHHhcCCCCC---EEEEeCCCCCCCCCCCHHHHHHHHHhCCCCc-----EEEEECchHhhcCCcccc-cHHHH
Confidence 78999999998866554 77778999999999999999999987 477 999999997655422111 11111
Q ss_pred c-c-cccEEEEcCCCCCC-CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhc-HHHHH
Q 011842 295 K-K-PIGSVSVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKG-FQKEV 370 (476)
Q Consensus 295 ~-~-~~Dsi~~s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g-~~~~~ 370 (476)
. . .-.++..++.|.++ +++++|++++++++++.+...... +. ...+.+.++...+.... .++..
T Consensus 208 ~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~~~~~~~~~~~~~-------~~-----~~~~~q~~~~~~l~~~~~~~~~~ 275 (359)
T PRK03158 208 LEKYENLIVLRTFSKAYGLAALRVGYGIASEELIEKLNIARPP-------FN-----TTRIAQYAAIAALEDQAFLKECV 275 (359)
T ss_pred HHhcCCEEEEEechHhhcCcchhhehhcCCHHHHHHHHHhcCC-------CC-----CCHHHHHHHHHHhcCHHHHHHHH
Confidence 1 1 13466678889887 679999999988877665322111 11 12455555555553322 45555
Q ss_pred HHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecCC-cHHHh-----hceeecc-----cCCEEEEEEcCCCCHHHHHHH
Q 011842 371 QKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERPQ-DEEFV-----RRWQLAC-----QGNIAHVVVMPNVTIDKLDDF 439 (476)
Q Consensus 371 ~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~-~~~~~-----~~~~l~~-----~~~~lRv~~~~~~T~edid~~ 439 (476)
+...++++++.+.|++.|+.. .++.++++.+..+. ..++. ++..+.. ..+++|+++. +.+++++|
T Consensus 276 ~~~~~~~~~~~~~l~~~~~~~-~~~~g~~i~~~~~~~~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~~~---~~~~~~~l 351 (359)
T PRK03158 276 EKNAEGLEQYYAFCKEYGLFY-YPSQTNFIFVDTGRDANELFEALLKKGYIVRSGAALGFPTGVRITIG---LKEQNDKI 351 (359)
T ss_pred HHHHHHHHHHHHHHHHCCCee-CCCcCcEEEEECCCCHHHHHHHHHHCCeEEeeCCCCCCCCeEEEecC---CHHHHHHH
Confidence 666778888888998887543 45556666665542 23332 2333322 2468999875 89999999
Q ss_pred HHHHHHH
Q 011842 440 LNELIEN 446 (476)
Q Consensus 440 ~~~l~~~ 446 (476)
+++|+++
T Consensus 352 ~~al~~~ 358 (359)
T PRK03158 352 IELLKEL 358 (359)
T ss_pred HHHHHHh
Confidence 9999875
No 158
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.85 E-value=1.6e-19 Score=184.21 Aligned_cols=267 Identities=16% Similarity=0.141 Sum_probs=191.0
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHH----HHHHHcCCeEEEEeCC
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVF----KAARMYRMECVKVDCL 214 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~----~~~~~~G~~v~~v~~~ 214 (476)
....++.+.++++.|.+. .+++++|+.|+..++.+... +++.|+++...|.+.. ..++..|++++.++.+
T Consensus 40 p~~~~le~~la~l~g~~~----a~~~~sG~~Ai~~~l~~l~~--~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~ 113 (369)
T cd00614 40 PTVDALEKKLAALEGGEA----ALAFSSGMAAISTVLLALLK--AGDHVVASDDLYGGTYRLFERLLPKLGIEVTFVDPD 113 (369)
T ss_pred hhHHHHHHHHHHHHCCCC----EEEEcCHHHHHHHHHHHHcC--CCCEEEECCCCcchHHHHHHHHHhhcCeEEEEeCCC
Confidence 444455566778888753 78899999999999988765 8999999999987754 3455679999988875
Q ss_pred CCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCC
Q 011842 215 ISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSF 294 (476)
Q Consensus 215 ~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~ 294 (476)
|++++++++.++++ +|++.+++|++|.+.|+++|+++|++||+ ++++|++|+.++.. .. +.
T Consensus 114 -----d~~~l~~~i~~~~~---~v~~e~~~np~g~~~dl~~i~~la~~~g~-----~livD~t~~~~~~~--~~---~~- 174 (369)
T cd00614 114 -----DPEALEAAIKPETK---LVYVESPTNPTLKVVDIEAIAELAHEHGA-----LLVVDNTFATPYLQ--RP---LE- 174 (369)
T ss_pred -----CHHHHHHhcCCCCe---EEEEECCCCCCCeecCHHHHHHHHHHcCC-----EEEEECCCcchhcC--Ch---hh-
Confidence 68999999976554 88888999999999999999999999999 99999999765431 00 11
Q ss_pred cccccEEEEcCCCCCCCC--CCceeEEeeh-hhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHH
Q 011842 295 KKPIGSVSVSGHKFVGCP--MPCGVQITRM-EHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQ 371 (476)
Q Consensus 295 ~~~~Dsi~~s~hK~l~~p--~~~G~l~~~~-~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~ 371 (476)
..+|+++.|++|+++++ ...|+++.++ ++.+.+.....++ ++. ..++..|..++.+ +.+..+++
T Consensus 175 -~g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~--------g~~--~~p~~a~~~l~~l--~tl~~r~~ 241 (369)
T cd00614 175 -LGADIVVHSATKYIGGHSDVIAGVVVGSGEALIQRLRFLRLAL--------GTI--LSPFDAWLLLRGL--KTLPLRME 241 (369)
T ss_pred -hCCcEEEeccceeccCCCCceEEEEEeCcHHHHHHHHHHHHhh--------CCC--CCHHHHHHHHcCC--CCHHHHHH
Confidence 24899999999999865 3478888877 5555443222221 111 2245666655544 66778899
Q ss_pred HHHHHHHHHHHHHHhcCCe-EeecC-----------------CeeEEEEecCCc----HHHhhceeecc-----------
Q 011842 372 KCLRNAHYLKDRLLDAGIS-AMLNE-----------------LSSTVVFERPQD----EEFVRRWQLAC----------- 418 (476)
Q Consensus 372 ~~~~~a~~l~~~L~~~g~~-~~~~~-----------------~~~iv~f~~~~~----~~~~~~~~l~~----------- 418 (476)
+..++++++.+.|++.+.. .+..| .+++++|...++ ..+.+.+.+..
T Consensus 242 ~~~~na~~la~~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~~~~~~~~~f~~~l~~~~~~~s~G~~~sl 321 (369)
T cd00614 242 RHSENALKVAEFLEKHPKVERVYYPGLPSHPQHELAKKQMSGYGGVFSFELKGGLEAAKKFLNALKLFSLAVSLGGVESL 321 (369)
T ss_pred HHHHHHHHHHHHHHcCCCccEEECCCCCCCchHHHHHHhcCCCceEEEEEeCCCHHHHHHHHHcCCcceEcccCCCCcee
Confidence 9999999999999998632 22222 257888887522 23333333210
Q ss_pred ----------------------cCCEEEEEEcCCCCHHHHHHHHHHHHHHH
Q 011842 419 ----------------------QGNIAHVVVMPNVTIDKLDDFLNELIENR 447 (476)
Q Consensus 419 ----------------------~~~~lRv~~~~~~T~edid~~~~~l~~~~ 447 (476)
..+.+|+++.- ||+|.++++|+++.
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~g~~~~liR~svGl----E~~~dl~~dl~~al 368 (369)
T cd00614 322 VEHPASMTHSQLPPEERAAAGITPGLVRLSVGI----EDVEDLIADLEQAL 368 (369)
T ss_pred eeCCcccccccCCHHHHHhcCCCCCeEEEEeCc----CCHHHHHHHHHHhh
Confidence 02468888764 78888888887764
No 159
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.85 E-value=8.8e-20 Score=184.86 Aligned_cols=272 Identities=14% Similarity=0.076 Sum_probs=191.7
Q ss_pred HHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCC-cEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccC
Q 011842 142 VGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPD-GILYASRESHYSVFKAARMYRMECVKVDCLISGEID 220 (476)
Q Consensus 142 ~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~-~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D 220 (476)
.++++++++.+|++++ ++++|+|+++++...+.+... ++ +.|+++.++|..+...++..|++++.+|.++++.+|
T Consensus 60 ~~l~~~~a~~~g~~~~--~I~~~~Gs~e~i~~~~~~~~~--~g~~~vli~~P~y~~y~~~~~~~G~~~~~v~~~~~~~~d 135 (351)
T PRK01688 60 KAVIENYAAYAGVKPE--QVLVSRGADEGIELLIRAFCE--PGKDAILYCPPTYGMYSVSAETIGVEIRTVPTLDNWQLD 135 (351)
T ss_pred HHHHHHHHHHhCCCHH--HEEEcCCHHHHHHHHHHHhcC--CCCCEEEEcCCCHHHHHHHHHHcCCEEEEeecCCCCCCC
Confidence 3667778888999764 599999999999888877654 65 899999999999999999999999999998788999
Q ss_pred HHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHh--CCCCCceEEEEecCcccccccccccCCCCCCcccc
Q 011842 221 CADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEES--GFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKPI 298 (476)
Q Consensus 221 ~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~--g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~~ 298 (476)
++.|++++ ++++ +|++++++|+||.+.+.++|.++++.. +. ++++|++|.-+... ......+.... -
T Consensus 136 ~~~l~~~~-~~~~---lv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~-----~vivDEay~~f~~~-~s~~~~~~~~~-n 204 (351)
T PRK01688 136 LPAIADNL-DGVK---VVYVCSPNNPTGNLINPQDLRTLLELTRGKA-----IVVADEAYIEFCPQ-ASLAGWLAEYP-H 204 (351)
T ss_pred HHHHHHhc-cCCc---EEEEeCCCCCCCCCCCHHHHHHHHHhCCCCc-----EEEEECchhhcCCC-CChHHHHhhCC-C
Confidence 99999987 4444 778889999999999888877777643 46 89999999654321 00000011011 1
Q ss_pred cEEEEcCCCCCC-CCCCceeEEeehhhhhhhcCCc-cccCCCCCcccCCCCChhHHHHHHHHHHhC---hhcHHHHHHHH
Q 011842 299 GSVSVSGHKFVG-CPMPCGVQITRMEHINVLSSNV-EYLASRDATIMGSRNGHAPIFLWYTLNRKG---YKGFQKEVQKC 373 (476)
Q Consensus 299 Dsi~~s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~-~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g---~~g~~~~~~~~ 373 (476)
-++.-|++|+++ +++++|++++++++++.+.... .| ..+ .+.+.++...+. .+-+++.++..
T Consensus 205 ~iv~rSfSK~~glaGlRiGy~i~~~~~i~~l~~~~~~~--------~v~-----~~~~~~a~~~L~~~~~~~~~~~~~~~ 271 (351)
T PRK01688 205 LVILRTLSKAFALAGLRCGFTLANEEVINLLLKVIAPY--------PLS-----TPVADIAAQALSPQGIAAMRERVAEI 271 (351)
T ss_pred EEEEecchHhhcCHHHHHhHHhCCHHHHHHHHhccCCC--------CCC-----HHHHHHHHHHHhcchHHHHHHHHHHH
Confidence 256678899776 7899999999888776654321 11 111 122222333332 23456667777
Q ss_pred HHHHHHHHHHHHhcCCe-EeecCCeeEEEEecCCcHHHh-----hceeec-c-----cCCEEEEEEcCCCCHHHHHHHHH
Q 011842 374 LRNAHYLKDRLLDAGIS-AMLNELSSTVVFERPQDEEFV-----RRWQLA-C-----QGNIAHVVVMPNVTIDKLDDFLN 441 (476)
Q Consensus 374 ~~~a~~l~~~L~~~g~~-~~~~~~~~iv~f~~~~~~~~~-----~~~~l~-~-----~~~~lRv~~~~~~T~edid~~~~ 441 (476)
.+.++++.+.|++.+.. .+.++.++.+.+..++..++. +++.+. + ..+++|+++. |.+++++|++
T Consensus 272 ~~~r~~l~~~L~~~~~~~~~~ps~~nfi~~~~~~~~~l~~~L~~~gi~vr~~~~~~~~~~~iRis~~---~~~e~~~l~~ 348 (351)
T PRK01688 272 NANRQWLIAALKEIPCVEQVFDSETNYILARFTASSAVFKSLWDQGIILRDQNKQPGLSNCLRITIG---TREECQRVID 348 (351)
T ss_pred HHHHHHHHHHHHhCCCCCeECCCCCcEEEEEcCCHHHHHHHHHHCCeEEEECCCcCCCCCeEEEeCC---CHHHHHHHHH
Confidence 78889999999987533 355667777777766443332 233332 1 1368999986 7899999999
Q ss_pred HHH
Q 011842 442 ELI 444 (476)
Q Consensus 442 ~l~ 444 (476)
+|+
T Consensus 349 al~ 351 (351)
T PRK01688 349 ALR 351 (351)
T ss_pred hhC
Confidence 873
No 160
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.85 E-value=5.1e-19 Score=178.41 Aligned_cols=270 Identities=13% Similarity=0.063 Sum_probs=179.8
Q ss_pred HHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEec---CCCchHHHHHHHHcCCeEEEEeCC
Q 011842 138 RQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYAS---RESHYSVFKAARMYRMECVKVDCL 214 (476)
Q Consensus 138 ~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s---~~~H~S~~~~~~~~G~~v~~v~~~ 214 (476)
.++++++.+++++++|.+++ ..++++||++||..++.+... |++.|++. .+.|.++...+++.|++++.+ +
T Consensus 53 ~~~~~~Le~~lA~~~g~~~e--~ilv~~gg~~a~~~~~~al~~--~gd~Vli~~~d~p~~~s~~~~~~l~ga~~~~~--~ 126 (346)
T TIGR03576 53 AIFEEKVQELGREHLGGPEE--KILVFNRTSSAILATILALEP--PGRKVVHYLPEKPAHPSIPRSCKLAGAEYFES--D 126 (346)
T ss_pred HHHHHHHHHHHHHHcCCCcc--eEEEECCHHHHHHHHHHHhCC--CCCEEEECCCCCCCchhHHHHHHHcCCEEecc--C
Confidence 48999999999999999654 399999999999999988776 89988853 679999999999999976432 2
Q ss_pred CCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccc---cCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCC
Q 011842 215 ISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAV---DDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPK 291 (476)
Q Consensus 215 ~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~i---d~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~ 291 (476)
|+++|+. . ++ +.+|++ .+++++|.+ .||++|+++|++||+ |+++|+||+.++.......+.
T Consensus 127 -----~l~~l~~-~-~~---~~lIii-tg~s~~G~v~~~~~L~~i~~la~~~~~-----~livDEAy~~~~~~~~~~~~~ 190 (346)
T TIGR03576 127 -----ELSELKK-I-DG---TSLVVI-TGSTMDLKVVSEEDLKRVIKQAKSKEA-----IVLVDDASGARVRRLYGQPPA 190 (346)
T ss_pred -----CHHHHhh-C-cC---ceEEEE-ECCCCCCcccCHHHHHHHHHHHHHcCC-----EEEEECCccccccccCCCCCH
Confidence 4555432 1 22 335555 468999998 799999999999999 999999998654321111111
Q ss_pred CCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCc-cccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHH
Q 011842 292 VSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNV-EYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEV 370 (476)
Q Consensus 292 ~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~-~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~ 370 (476)
.. ..+|+++.+++|++. +++.|+++.++++++.+.... .|. .+. .+..+++++..+.....+...
T Consensus 191 ~~--~~~divv~s~SKala-G~r~G~v~~~~~li~~l~~~~~~~~--------~s~---~~~~~~aa~~aL~~~~~~~~~ 256 (346)
T TIGR03576 191 LD--LGADLVVTSTDKLMD-GPRGGLLAGRKELVDKIKSVGEQFG--------LEA---QAPLLAAVVRALEEFELSRIR 256 (346)
T ss_pred HH--cCCcEEEeccchhcc-ccceEEEEeCHHHHHHHHHhhcCcc--------cCc---cHHHHHHHHHHHhhccHHHHH
Confidence 11 126888899999764 577999999988776664322 222 111 123444444444222234556
Q ss_pred HHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecCC--cHHHh----h--ceee-cc-----cCCEEEEEEcCCC-CHHH
Q 011842 371 QKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERPQ--DEEFV----R--RWQL-AC-----QGNIAHVVVMPNV-TIDK 435 (476)
Q Consensus 371 ~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~--~~~~~----~--~~~l-~~-----~~~~lRv~~~~~~-T~ed 435 (476)
+.+.++++++.+.++..+ +.++..+.+++..+. +.++. + +..+ +. ..+++|+++.... ++.+
T Consensus 257 ~~l~~r~~~~~~~l~~~~---~~~~~~~f~~~~~~~~~~~~~~~~ll~~~gV~v~~~~~f~~~~~~vRis~~~~~~~~~~ 333 (346)
T TIGR03576 257 DAFKRKEEVYLRLFDKLN---VERTPTGFVIKGVEEEKLIEIGLDLLRNYGIITITAVGMPGASKTLRFDLAAKDAERIG 333 (346)
T ss_pred HHHHHHHHHHHHHHHhCC---CCcCCCeEEEEeCCCCCHHHHHHHHHHhCCEEEeCCcccCCCCCeEEEEEecChHHhcC
Confidence 677777777777777433 223456666666643 22222 1 2222 21 1468999886322 3448
Q ss_pred HHHHHHHHHHH
Q 011842 436 LDDFLNELIEN 446 (476)
Q Consensus 436 id~~~~~l~~~ 446 (476)
+++|+++|++.
T Consensus 334 ~~~~~~al~~~ 344 (346)
T TIGR03576 334 DDYLVEAVKDS 344 (346)
T ss_pred HHHHHHHHHhc
Confidence 99999999764
No 161
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.85 E-value=3.2e-18 Score=176.34 Aligned_cols=292 Identities=13% Similarity=0.119 Sum_probs=196.5
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCC
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLI 215 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~ 215 (476)
+..++++++.+++.+ .|...+...+++|+|+++|+..++.+... ||+.|+++++.|..+...++..|++++.++.+.
T Consensus 67 g~~~lr~~ia~~~~~-~~~~~~~~~i~~t~G~~~al~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~ 143 (397)
T PRK07568 67 GIPELREAFAKYYKK-WGIDVEPDEILITNGGSEAILFAMMAICD--PGDEILVPEPFYANYNGFATSAGVKIVPVTTKI 143 (397)
T ss_pred CCHHHHHHHHHHHHH-hCCCCCcceEEEcCChHHHHHHHHHHhcC--CCCEEEEecCCCccHHHHHHHcCCEEEEeecCc
Confidence 456888888888763 45543344699999999999988877654 899999999988888888889999999999863
Q ss_pred -CC-c-cCHHHHHHHHHcCCCCcEEEEEeeCCCcccccc---CHHHHHHHHHHhCCCCCceEEEEecCcccccccccccC
Q 011842 216 -SG-E-IDCADFKAKLLQNKDKPAIINVNIGTTVKGAVD---DLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKA 289 (476)
Q Consensus 216 -~g-~-~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id---~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~ 289 (476)
+| . .|++.|++++.++++ +|++++++|+||.+- ++++|+++|+++|+ ++++|++|+.+.+......
T Consensus 144 ~~g~~~~~~~~l~~~~~~~~~---~v~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~-----~ii~De~y~~~~~~~~~~~ 215 (397)
T PRK07568 144 EEGFHLPSKEEIEKLITPKTK---AILISNPGNPTGVVYTKEELEMLAEIAKKHDL-----FLISDEVYREFVYDGLKYT 215 (397)
T ss_pred ccCCCCCCHHHHHHhcCccce---EEEEECCCCCCCccCCHHHHHHHHHHHHHCCc-----EEEEeccchhcccCCCCcc
Confidence 33 2 367999998876554 777888999999986 48899999999999 9999999987654322122
Q ss_pred CCCCCcc--cccEEEEcCCCCCC-CCCCceeEEeeh-hhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHh--Ch
Q 011842 290 PKVSFKK--PIGSVSVSGHKFVG-CPMPCGVQITRM-EHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRK--GY 363 (476)
Q Consensus 290 ~~~~~~~--~~Dsi~~s~hK~l~-~p~~~G~l~~~~-~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~--g~ 363 (476)
+...+.. .-.++..|++|.++ .++++|++++++ ++++.+...... .+ +.+ .+.+.++...+ +.
T Consensus 216 s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~------~~--~~s---~~~q~~~~~~l~~~~ 284 (397)
T PRK07568 216 SALSLEGLEDRVIIIDSVSKRYSACGARIGCLISKNKELIAAAMKLCQA------RL--SPP---TLEQIGAAALLDTPE 284 (397)
T ss_pred ChhhcCCCcCCEEEEecchhhccCCCcceEEEecCCHHHHHHHHHHhhc------cC--CCC---cHHHHHHHHHhhCCH
Confidence 2222211 11256678899876 689999999864 455443211110 01 111 23333333333 23
Q ss_pred hcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCe-eEEEEecCC--cHHHhh-----------ceeecc----------c
Q 011842 364 KGFQKEVQKCLRNAHYLKDRLLDAGISAMLNELS-STVVFERPQ--DEEFVR-----------RWQLAC----------Q 419 (476)
Q Consensus 364 ~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~-~iv~f~~~~--~~~~~~-----------~~~l~~----------~ 419 (476)
..+++..+...++++.+.+.|++.+...+..|.. ..+.++.+. ..++.+ ++.+.. .
T Consensus 285 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~g~~~~~~~l~~~~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~ 364 (397)
T PRK07568 285 SYFDEVREEYKKRRDILYEELNKIPGVVCEKPKGAFYIIAKLPVDDAEDFAKWLLTDFNYNGETVMVAPASGFYATPGLG 364 (397)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCcceEEEEecCCCCHHHHHHHHHhhcccccceEEEeCchHhcCCCCCC
Confidence 4466677778888999999998874333344444 444555543 233321 232211 1
Q ss_pred CCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 011842 420 GNIAHVVVMPNVTIDKLDDFLNELIENRSTWY 451 (476)
Q Consensus 420 ~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~ 451 (476)
.+.+|+++. .+.++++..++.|.+..++..
T Consensus 365 ~~~iRls~~--~~~~~~~~~~~~l~~~l~~~~ 394 (397)
T PRK07568 365 KNEIRIAYV--LNEEDLKRAMEILKEALEKYN 394 (397)
T ss_pred CCeEEEEEe--CCHHHHHHHHHHHHHHHHHhh
Confidence 258999986 467999999999998887655
No 162
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.85 E-value=9.9e-19 Score=177.55 Aligned_cols=274 Identities=12% Similarity=0.040 Sum_probs=183.3
Q ss_pred HHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCC--CccC
Q 011842 143 GVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLIS--GEID 220 (476)
Q Consensus 143 ~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~--g~~D 220 (476)
.+++.++++++++++ ++++|+|+++++..++.+. . ++++ ++..+.+..+...++..|++++.+|++++ ..+|
T Consensus 59 ~lr~~ia~~~~~~~~--~i~it~Ga~~~l~~~~~~l-~--~g~v-iv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~ 132 (356)
T PRK08056 59 HLHQALARHHQVPAS--WILAGNGETESIFAVVSGL-K--PRRA-MIVTPGFAEYRRALQQVGCEIRRYSLREADGWQLT 132 (356)
T ss_pred HHHHHHHHHhCcChh--hEEECCCHHHHHHHHHHHh-C--CCCE-EEeCCCcHHHHHHHHHcCCeEEEEecccccCCCcc
Confidence 444556666788754 5999999999988877764 3 6664 55578888888899999999999998643 3455
Q ss_pred HHHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCccc
Q 011842 221 CADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKP 297 (476)
Q Consensus 221 ~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~ 297 (476)
+++++.+.++++ +|++++++|+||.+-+ +++|+++|++|++ ++++|++|..+........+.+... .
T Consensus 133 -~~~~~~~~~~~k---~v~l~~p~NPTG~~~~~~~~~~i~~~a~~~~~-----~ii~De~y~~~~~~~~~~~~~~~~~-~ 202 (356)
T PRK08056 133 -DAILEALTPDLD---CLFLCTPNNPTGLLPERQLLQAIAERCKSLNI-----ALILDEAFIDFIPDETGFIPQLADN-P 202 (356)
T ss_pred -HHHHHhccCCCC---EEEEeCCcCCCCCCCCHHHHHHHHHHHHhcCC-----EEEEecchhccCCcchHHHHHhccC-C
Confidence 355555654444 7778899999999988 8889999999999 9999999976543221111112111 2
Q ss_pred ccEEEEcCCCCCC-CCCCceeEEeeh-hhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhCh-hcHHHHHHHHH
Q 011842 298 IGSVSVSGHKFVG-CPMPCGVQITRM-EHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGY-KGFQKEVQKCL 374 (476)
Q Consensus 298 ~Dsi~~s~hK~l~-~p~~~G~l~~~~-~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~-~g~~~~~~~~~ 374 (476)
.++++.|++|+++ +++++|++++++ +.++.+...... .+ ...+.+.++...+.. .-.++..++..
T Consensus 203 ~~i~~~S~SK~~~~~G~RiG~~v~~~~~~~~~l~~~~~~---------~~---~~~~~~~~a~~~l~~~~~~~~~~~~~~ 270 (356)
T PRK08056 203 HLWVLRSLTKFYAIPGLRLGYLVNSDDAAVARMRRQQMP---------WS---INAFAALAGEVILQDRAYQQATWQWLA 270 (356)
T ss_pred CEEEEEechhhccCcchhheeeecCCHHHHHHHHHhCCC---------Cc---hhHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 4577899999998 889999999854 454444321110 01 112344444444422 22455567778
Q ss_pred HHHHHHHHHHHhcCCeEeecCCeeEEEEecCC-cHHHhh-----ceeec-c------cCCEEEEEEcCCCCHHHHHHHHH
Q 011842 375 RNAHYLKDRLLDAGISAMLNELSSTVVFERPQ-DEEFVR-----RWQLA-C------QGNIAHVVVMPNVTIDKLDDFLN 441 (476)
Q Consensus 375 ~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~-~~~~~~-----~~~l~-~------~~~~lRv~~~~~~T~edid~~~~ 441 (476)
++++++.+.|++.+...+.++.++.+.+..+. ..++.+ ++.+. . ..+++|+++. +.++.++|++
T Consensus 271 ~~r~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis~~---~~~~~~~l~~ 347 (356)
T PRK08056 271 EEGARFYQALCALPLLTVWPGRANYLFLRCERPDIDLQRALLTQRILIRSCANYPGLDSRYYRVAIR---SAAENERLLA 347 (356)
T ss_pred HHHHHHHHHHhcCCCcEEcCCCCcEEEEEcCCChHHHHHHHHHCCeEEEECCCCCCCCCCEEEEEEc---CHHHHHHHHH
Confidence 88899999998874334455667777666653 233322 23321 1 1358999985 7899999999
Q ss_pred HHHHHH
Q 011842 442 ELIENR 447 (476)
Q Consensus 442 ~l~~~~ 447 (476)
+|+++.
T Consensus 348 ~l~~~~ 353 (356)
T PRK08056 348 ALRNVL 353 (356)
T ss_pred HHHHHH
Confidence 998653
No 163
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.84 E-value=4.4e-19 Score=180.14 Aligned_cols=286 Identities=12% Similarity=0.009 Sum_probs=193.4
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEc-CCchhHHHHHHHHHHhhCCCcEEEecCCCchH-HHHHHHHc--CCeEEEE
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYIT-NCGTEGNLHGILVGREVFPDGILYASRESHYS-VFKAARMY--RMECVKV 211 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t-~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S-~~~~~~~~--G~~v~~v 211 (476)
...++.+++++.+++++|.++ ++..+|+ ++||.++..++..... + +.++++.-.|.+ +.+.+.+. ..++..+
T Consensus 38 ~f~~~~~~~r~~l~~l~~~~~-~~~v~f~~gs~T~a~~~~~~~l~~--~-~~l~i~~G~~~~~~~~~a~~~~~~~~~~~~ 113 (361)
T TIGR01366 38 PVKNLVGRVREGLAELFSLPD-GYEVILGNGGATAFWDAATFGLIE--K-KSLHLSFGEFSSKFAKAVKLAPWLGEPIIV 113 (361)
T ss_pred HHHHHHHHHHHHHHHHhCCCC-CceEEEECCchhHHHHHHHHhccc--c-cccEEecCHHHHHHHHHHHhhhccCCceEE
Confidence 567888999999999999964 3457776 5589998888776542 2 233333334433 33444442 2367777
Q ss_pred eCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCC
Q 011842 212 DCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPK 291 (476)
Q Consensus 212 ~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~ 291 (476)
+.+....++. .+.+++ .+|++++.+|.+|.+.|+++| ++++|+ +++||++++.+..+
T Consensus 114 ~~~~~~~~~~-----~~~~~~---~lV~~~h~et~tG~~~pi~~I---~~~~g~-----~~iVDavqs~g~~~------- 170 (361)
T TIGR01366 114 TADPGSAPEP-----QADPGV---DVIAWAHNETSTGVAVPVRRP---EGSDDA-----LVVIDATSGAGGLP------- 170 (361)
T ss_pred ecCCCCCCCC-----ccCCCC---CEEEEcccCCccceecccccc---cccCCC-----eEEEEcCccccCCC-------
Confidence 7654443443 233344 489999999999999999988 588999 99999999887776
Q ss_pred CCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCC-------ccccCCC-------CCcccCCCCChhHHHHHHH
Q 011842 292 VSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSN-------VEYLASR-------DATIMGSRNGHAPIFLWYT 357 (476)
Q Consensus 292 ~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~-------~~yl~~~-------~~~~~~sr~~~~~l~~~~~ 357 (476)
+++.+ +|++++++||+++.|.+.++++++++.++.+... +.|+.-. .....++.+....+++..+
T Consensus 171 idv~~-~D~~~~s~~K~lg~~~Gl~~~~~s~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~a 249 (361)
T TIGR01366 171 VDIAE-TDVYYFAPQKNFASDGGLWLAIMSPAALERIEAIAASGRWVPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQ 249 (361)
T ss_pred CCHHH-CCEEEEEchhhcCCCCceEEEEECHHHHhhhhcccCCCCCCchhhhHHHHHhccccCCCCCCchHHHHHHHHHH
Confidence 55544 8999999999999888888888898866444210 1232110 0111234433334467778
Q ss_pred HHHhChh-cHHHHHHHHHHHHHHHHHHHHhcCCeE-eec-C--Ce---eEEEEecC-CcHHHh-----hceeecc-----
Q 011842 358 LNRKGYK-GFQKEVQKCLRNAHYLKDRLLDAGISA-MLN-E--LS---STVVFERP-QDEEFV-----RRWQLAC----- 418 (476)
Q Consensus 358 l~~~g~~-g~~~~~~~~~~~a~~l~~~L~~~g~~~-~~~-~--~~---~iv~f~~~-~~~~~~-----~~~~l~~----- 418 (476)
++++... |++.+.++..++++++++.|++.+... +.. + .+ .++.|..+ +..++. +++.+..
T Consensus 250 l~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~v~~v~~~~g~~~~~v~~~L~~~gI~i~~~~~~l 329 (361)
T TIGR01366 250 IDWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKRSQVVGTIDFVDDIDAATVAKILRANGIVDTEPYRKL 329 (361)
T ss_pred HHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcccceEEEECCCccCHHHHHHHHHHCCCeeccCcccc
Confidence 8888666 699999999999999999999998533 322 1 12 34555321 122221 2222211
Q ss_pred cCCEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Q 011842 419 QGNIAHVVVMPNVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 419 ~~~~lRv~~~~~~T~edid~~~~~l~~~~~~ 449 (476)
....+|++++.++|.+||++|+++|+++.++
T Consensus 330 ~~~~vRis~~~~~t~~di~~l~~al~~~~~~ 360 (361)
T TIGR01366 330 GRNQLRVAMFPAIDPDDVEALTECVDWVVER 360 (361)
T ss_pred CCCcEEEEcCCCCCHHHHHHHHHHHHHHHhh
Confidence 2357999999999999999999999998764
No 164
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.84 E-value=2.7e-19 Score=181.86 Aligned_cols=291 Identities=15% Similarity=0.120 Sum_probs=195.8
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcc-cEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCC
Q 011842 136 HSRQFEVGVLDWFARLWELENNEY-WGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCL 214 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~-~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~ 214 (476)
+..++++++.+++.+-.|.+.+.. ..++++|+++++..++.+.. ..+++.|+++++.|..+...++..|++++.+|++
T Consensus 45 g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~~~~~~~~~~~-~~~~~~vlv~~P~y~~~~~~~~~~g~~~~~~~~~ 123 (363)
T PF00155_consen 45 GYPELREAIADFLGRRYGVPVDPEANILVTSGAQAALFLLLRLLK-INPGDTVLVPDPCYPSYIEAARLLGAEVIPVPLD 123 (363)
T ss_dssp HHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHHHHHHHHHHHHH-SSTTSEEEEEESSSTHHHHHHHHTTSEEEEEEEE
T ss_pred hhHHHHHHHHHHhhhccCcccccceEEEEecccccchhhhhhccc-ccccccceecCCccccccccccccCceeeecccc
Confidence 456899998888886667665444 56666555555555444442 2388999999999999999999999999999965
Q ss_pred --CCCccCHHHHHHHHHcCC-C--CcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCccccccccc
Q 011842 215 --ISGEIDCADFKAKLLQNK-D--KPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFV 286 (476)
Q Consensus 215 --~~g~~D~~~Le~~l~~~~-~--~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~ 286 (476)
.++.+|+++|++.+++.. + ++.+|+++.+.++||..-+ +++|+++|++||+ ++++|++|+.+.....
T Consensus 124 ~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~-----~ii~De~y~~~~~~~~ 198 (363)
T PF00155_consen 124 SENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPTGSVLSLEELRELAELAREYNI-----IIIVDEAYSDLIFGDP 198 (363)
T ss_dssp ETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTTTBB--HHHHHHHHHHHHHTTS-----EEEEEETTTTGBSSSS
T ss_pred ccccccccccccccccccccccccccceeeecccccccccccccccccchhhhhccccc-----ceeeeeceeccccCCC
Confidence 578999999999998741 1 2457888899999999865 5555566999999 9999999987765422
Q ss_pred ccCC-CCCCcccc-cEEEEcCCCCCC-CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhC-
Q 011842 287 KKAP-KVSFKKPI-GSVSVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKG- 362 (476)
Q Consensus 287 ~~~~-~~~~~~~~-Dsi~~s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g- 362 (476)
...+ ........ .+++.|+.|.++ .++++|++++++++++.+....... .. +......+...+...+
T Consensus 199 ~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRvG~i~~~~~~~~~l~~~~~~~-------~~--~~~~~~~~~~~l~~~~~ 269 (363)
T PF00155_consen 199 DFGPIRSLLDEDDNVIVVGSLSKSFGLPGLRVGYIVAPPELIERLRRFQRSG-------LS--SSPMQAAAAAALSDPEL 269 (363)
T ss_dssp HTHHHHGHHTTTSTEEEEEESTTTTTSGGGTEEEEEEEHHHHHHHHHHHHHT-------TS--SHHHHHHHHHHHHHHHH
T ss_pred ccCcccccccccccceeeeeccccccccccccccccchhhhhhhhhhccccc-------cc--cchhhHHHHHhhhcccc
Confidence 1100 01111222 477888999775 5689999999877766553221111 11 1111111222222222
Q ss_pred -hhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecCCc---HHH----hh--ceeecc-----cCCEEEEEE
Q 011842 363 -YKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERPQD---EEF----VR--RWQLAC-----QGNIAHVVV 427 (476)
Q Consensus 363 -~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~~---~~~----~~--~~~l~~-----~~~~lRv~~ 427 (476)
.+.+++..+++.++++++.+.|++.++....++ +++++|...+. .++ .+ ++.+.. ..+++|+++
T Consensus 270 ~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~gi~v~pg~~~~~~~~iRi~~ 348 (363)
T PF00155_consen 270 VEKWLEELRERLRENRDLLREALEEIGITVLPPE-AGFFLWVRLDPNDAEELAQELLEEYGILVRPGSYFGVPGYIRISL 348 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTSEEEHHS-BSSEEEEEESHHHHHHHHHHHHHHHTEEEEEGGGGTSTTEEEEEG
T ss_pred cccccccchhhHHHHHHHHHHHHHHhhhheeecc-CccEEEEEcccchHHHHHHHHHHhCCEEEEecCCCCCCCEEEEEe
Confidence 125677888899999999999999887655444 55555543332 222 22 333321 257899999
Q ss_pred cCCCCHHHHHHHHHHH
Q 011842 428 MPNVTIDKLDDFLNEL 443 (476)
Q Consensus 428 ~~~~T~edid~~~~~l 443 (476)
...+++++++++++|
T Consensus 349 -a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 349 -ASHSEEDLEEALERL 363 (363)
T ss_dssp -GCSCHHHHHHHHHHH
T ss_pred -ccCCHHHHHHHHhhC
Confidence 899999999999875
No 165
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.84 E-value=4.7e-18 Score=173.76 Aligned_cols=289 Identities=10% Similarity=-0.031 Sum_probs=191.6
Q ss_pred hhHHHHHHHHHHHHHHc--CCCCCcccEEEcCCchhHHHHHHHHHHhhCCCc-EEEecCCCchHHHHHHHHcCCeEEEEe
Q 011842 136 HSRQFEVGVLDWFARLW--ELENNEYWGYITNCGTEGNLHGILVGREVFPDG-ILYASRESHYSVFKAARMYRMECVKVD 212 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~--g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~-~Vl~s~~~H~S~~~~~~~~G~~v~~v~ 212 (476)
+..++++++++|+.+.. |++.+..++++|+|+++++..++.+... +++ .|++..++|..+...++.+|++++.++
T Consensus 67 G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga~~al~~~~~~~~~--~g~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~ 144 (374)
T PRK02610 67 GHEALKQAIAEYVNESAAGSSQITPANISVGNGSDELIRSLLIATCL--GGEGSILVAEPTFSMYGILAQTLGIPVVRVG 144 (374)
T ss_pred chHHHHHHHHHHhCccccccCCCCHHHEEEcCChHHHHHHHHHHHcC--CCCCeEEEcCCChHHHHHHHHHcCCEEEEec
Confidence 34588888888887764 3333334699999999999877666544 554 899999999999999999999999999
Q ss_pred CCC-CCccCHHHHHHHHHcC-CCCcEEEEEeeCCCccccccCHHHHHHHHHH-hCCCCCceEEEEecCcccccccccccC
Q 011842 213 CLI-SGEIDCADFKAKLLQN-KDKPAIINVNIGTTVKGAVDDLDLVIQTLEE-SGFTQDRFYIHCDGALFGLMMPFVKKA 289 (476)
Q Consensus 213 ~~~-~g~~D~~~Le~~l~~~-~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~-~g~~~~~~~lhvD~a~~g~~~~~~~~~ 289 (476)
+++ ++.+|+++|++++.+. ..++.+|+++++.|+||.+-+.+++.++++- +++ ||++|++|..+.... ..
T Consensus 145 ~~~~~~~~d~~~l~~~~~~~~~~~~k~i~l~~P~NPTG~~~s~~~l~~l~~~~~~~-----~iI~De~Y~~~~~~~--~~ 217 (374)
T PRK02610 145 RDPETFEIDLAAAQSAIEQTQNPPVRVVFVVHPNSPTGNPLTAAELEWLRSLPEDI-----LVVIDEAYFEFSQTT--LV 217 (374)
T ss_pred CCcccCCCCHHHHHHHHHhhcCCCceEEEEeCCCCCCCCCCCHHHHHHHHhccCCc-----EEEEeccccccCccc--hH
Confidence 875 4789999999998741 1234478788899999999887776666542 477 999999997543210 00
Q ss_pred CCCCCcccccEEEEcCCCCC-CCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhCh-hcHH
Q 011842 290 PKVSFKKPIGSVSVSGHKFV-GCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGY-KGFQ 367 (476)
Q Consensus 290 ~~~~~~~~~Dsi~~s~hK~l-~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~-~g~~ 367 (476)
+.+..... -++..|+.|.+ ++++++|+++.++++++.+....... +. ..+.+.++...+.. +.+.
T Consensus 218 ~~~~~~~~-~ivi~SfSK~~g~~GlRiG~~v~~~~l~~~l~~~~~~~---------~~---~~~~q~a~~~~l~~~~~~~ 284 (374)
T PRK02610 218 GELAQHPN-WVILRTFSKAFRLAAHRVGYAIGHPELIAVLEKVRLPY---------NL---PSFSQLAAQLALEHRQELL 284 (374)
T ss_pred HHHhcCCC-EEEEEecchhccCcccceeeeecCHHHHHHHHHhcCCC---------CC---CHHHHHHHHHHhcCHHHHH
Confidence 11111111 24567889988 68999999999888776653322110 01 12344444444432 2334
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecCC---cHHHhh-----ceeecccCCEEEEEEcCCCCHHHHHHH
Q 011842 368 KEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERPQ---DEEFVR-----RWQLACQGNIAHVVVMPNVTIDKLDDF 439 (476)
Q Consensus 368 ~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~---~~~~~~-----~~~l~~~~~~lRv~~~~~~T~edid~~ 439 (476)
+.+++..+.++.+.+.|++.+.....++.++.+.++.+. ..++.+ +..+....+.+|+++. +.++++++
T Consensus 285 ~~~~~~~~~r~~l~~~L~~~~~~~~~p~~g~f~~~~l~~~~~~~~~~~~l~~~gi~v~~~~~~lRls~~---~~~~~~~~ 361 (374)
T PRK02610 285 AAIPEILQERDRLYQALQELPQLRVWPSAANFLYLRLSQDAALAALHQALKAQGTLVRHTGGGLRITIG---TPEENQRT 361 (374)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCcEeCCCcceEEEEeCCCCCCHHHHHHHHHHCCEEEEeCCCeEEEeCC---CHHHHHHH
Confidence 444555556777888887763333445566666666553 233322 3334334578999875 36788999
Q ss_pred HHHHHHHHHH
Q 011842 440 LNELIENRST 449 (476)
Q Consensus 440 ~~~l~~~~~~ 449 (476)
++.|+++.+.
T Consensus 362 l~~l~~~l~~ 371 (374)
T PRK02610 362 LERLQAALTQ 371 (374)
T ss_pred HHHHHHHHhh
Confidence 9999877653
No 166
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.84 E-value=3.3e-18 Score=180.26 Aligned_cols=294 Identities=9% Similarity=0.050 Sum_probs=198.6
Q ss_pred hhHHHHHHHHHHHHHHcC--CCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHH-HcCCeEEEEe
Q 011842 136 HSRQFEVGVLDWFARLWE--LENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAAR-MYRMECVKVD 212 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g--~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~-~~G~~v~~v~ 212 (476)
+..++++++++|+.+..| .+.++.++++|+|+++|+...+.+..+ ||+.|+++.+.|..+...++ ..|++++.||
T Consensus 95 G~~~LR~aiA~~l~~~~g~~v~v~pe~Ivit~Ga~~al~~l~~~l~~--pGD~Vlv~~P~Y~~~~~~~~~~~G~~vv~v~ 172 (496)
T PLN02376 95 GLKKFRQAIAHFMGKARGGKVTFDPERVVMSGGATGANETIMFCLAD--PGDVFLIPSPYYAAFDRDLRWRTGVEIIPVP 172 (496)
T ss_pred CcHHHHHHHHHHHHHHhCCCCcCChhhEEEccchHHHHHHHHHHhCC--CCCEEEECCCCccchHHHHHhhCCCEEEEEe
Confidence 567999999999999877 333334699999999999998888876 99999999999999988777 4899999999
Q ss_pred CC--CCCccCHHHHHHHHHc---CCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCccccccc
Q 011842 213 CL--ISGEIDCADFKAKLLQ---NKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMP 284 (476)
Q Consensus 213 ~~--~~g~~D~~~Le~~l~~---~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~ 284 (476)
++ +++.+|++.|++++.. .+.++.+|++++|+|+||.+-+ +++|+++|++|++ +|++|++|+...+.
T Consensus 173 ~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i-----~lI~DEiY~~~~f~ 247 (496)
T PLN02376 173 CSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNI-----HLVVDEIYAATVFA 247 (496)
T ss_pred CCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCC-----EEEEEcCccccccC
Confidence 95 3568999999887542 2234557778899999999966 6778899999999 99999999876543
Q ss_pred ccccCCCCCCcc-------ccc--EEEEcCCCCCC-CCCCceeEEeehh-hhhhhcCCccccCCCCCcccCCCCChhHHH
Q 011842 285 FVKKAPKVSFKK-------PIG--SVSVSGHKFVG-CPMPCGVQITRME-HINVLSSNVEYLASRDATIMGSRNGHAPIF 353 (476)
Q Consensus 285 ~~~~~~~~~~~~-------~~D--si~~s~hK~l~-~p~~~G~l~~~~~-~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~ 353 (476)
.....+...... ..+ .+..+++|.++ .++++|+++..++ +.+.+.....+. . ...+.
T Consensus 248 ~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~~~l~~~~~~~~~~~---------~---vs~~~ 315 (496)
T PLN02376 248 GGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFNDSVVSCARKMSSFG---------L---VSSQT 315 (496)
T ss_pred CCCcccHHHhhccccccccCCCeEEEEEeccccCCCCcceEEEEEECCHHHHHHHHHHhhcC---------C---CCHHH
Confidence 222211111100 012 34578999885 7899999999655 333322111110 0 11344
Q ss_pred HHHHHHHhChhcH-----HHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecCC---c-------HHH----hh--
Q 011842 354 LWYTLNRKGYKGF-----QKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERPQ---D-------EEF----VR-- 412 (476)
Q Consensus 354 ~~~~l~~~g~~g~-----~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~---~-------~~~----~~-- 412 (476)
++++...+....+ ++..+++.++.+.+.+.|++.|+....+.....+.+..+. + .++ .+
T Consensus 316 Q~a~~~~L~d~~~~~~~l~~~r~~l~~r~~~l~~~L~~~gi~~~~~~aG~flwi~l~~~~~~~~~~~~e~~l~~~ll~~~ 395 (496)
T PLN02376 316 QLMLASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKKADIACLTSNAGLFAWMDLRHLLRDRNSFESEIELWHIIIDKV 395 (496)
T ss_pred HHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCceEEEEEEchhhhccCCchhHHHHHHHHHHHcC
Confidence 4444444433222 3335566777888889998887654444344555555432 1 112 11
Q ss_pred ceeecc-------cCCEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Q 011842 413 RWQLAC-------QGNIAHVVVMPNVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 413 ~~~l~~-------~~~~lRv~~~~~~T~edid~~~~~l~~~~~~ 449 (476)
+..+.. ..+++|+++.. .+.+.++..++.|.+...+
T Consensus 396 gV~v~pGs~F~~~~~g~~Ri~fa~-~~~~~l~~al~rl~~~l~~ 438 (496)
T PLN02376 396 KLNVSPGSSFRCTEPGWFRICFAN-MDDDTLHVALGRIQDFVSK 438 (496)
T ss_pred CEEEeCccccCCCCCCEEEEEeeC-CCHHHHHHHHHHHHHHHHH
Confidence 333321 24689999863 4568888888888887754
No 167
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.83 E-value=1.3e-18 Score=178.40 Aligned_cols=213 Identities=17% Similarity=0.168 Sum_probs=158.4
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHH----HHHHHcCCeEEEEeCC
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVF----KAARMYRMECVKVDCL 214 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~----~~~~~~G~~v~~v~~~ 214 (476)
...+++++.+++++|.+. .++|+||+.|+..++.+... +|+.|+++...|.+.. ..++.+|++++.++.+
T Consensus 61 p~~~~le~~la~l~g~~~----~v~~ssG~~Ai~~al~al~~--~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~ 134 (390)
T PRK08133 61 PTVTMFQERLAALEGAEA----CVATASGMAAILAVVMALLQ--AGDHVVSSRSLFGSTVSLFEKIFARFGIETTFVDLT 134 (390)
T ss_pred hHHHHHHHHHHHHhCCCc----EEEECCHHHHHHHHHHHHhC--CCCEEEEccCcchhHHHHHHHHHHHcCcEEEEECCC
Confidence 334556777888898763 78999999999998887755 8999999998886543 4566789999999875
Q ss_pred CCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCC
Q 011842 215 ISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSF 294 (476)
Q Consensus 215 ~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~ 294 (476)
|++++++++.++++ +|+++++++++|.+.|+++|+++|++||+ ++++|++|+..... .+ +
T Consensus 135 -----d~~~l~~~i~~~tk---lV~ie~p~NptG~v~dl~~I~~la~~~gi-----~livD~t~~~~~~~----~p-l-- 194 (390)
T PRK08133 135 -----DLDAWRAAVRPNTK---LFFLETPSNPLTELADIAALAEIAHAAGA-----LLVVDNCFCTPALQ----QP-L-- 194 (390)
T ss_pred -----CHHHHHHhcCcCCe---EEEEECCCCCCCCcCCHHHHHHHHHHcCC-----EEEEECCCcccccC----Cc-h--
Confidence 89999999977665 88888999999999999999999999999 99999998654331 11 1
Q ss_pred cccccEEEEcCCCCCCCCC-Cc-eeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHHH
Q 011842 295 KKPIGSVSVSGHKFVGCPM-PC-GVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQK 372 (476)
Q Consensus 295 ~~~~Dsi~~s~hK~l~~p~-~~-G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~ 372 (476)
..++|+++.|++|+++++. .. |+++.+++.++.+.. ++.. .+.. ..++.+|..++ |.+.+..++++
T Consensus 195 ~~g~Divv~S~sK~~~g~g~~~GG~vv~~~~~~~~~~~---~~~~-----~g~~--~~~~~a~~~l~--gl~tl~~R~~~ 262 (390)
T PRK08133 195 KLGADVVIHSATKYLDGQGRVLGGAVVGSKELMEEVFG---FLRT-----AGPT--LSPFNAWVFLK--GLETLSLRMEA 262 (390)
T ss_pred hhCCcEEEeecceeecCCcceEeEEEEcCHHHHHHHHH---HHHH-----hCCC--CCHHHHHHHHc--ccchHHHHHHH
Confidence 1237999999999997543 34 666666665443321 1110 1111 22455555543 45678889999
Q ss_pred HHHHHHHHHHHHHhcCC
Q 011842 373 CLRNAHYLKDRLLDAGI 389 (476)
Q Consensus 373 ~~~~a~~l~~~L~~~g~ 389 (476)
..+++..+.+.|++.+.
T Consensus 263 ~~~~a~~la~~L~~~p~ 279 (390)
T PRK08133 263 HSANALALAEWLEAHPG 279 (390)
T ss_pred HHHHHHHHHHHHHhCCC
Confidence 99999999999998753
No 168
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.83 E-value=1.9e-18 Score=177.10 Aligned_cols=265 Identities=15% Similarity=0.172 Sum_probs=182.1
Q ss_pred HHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHH----HHcCCeEEEEeCCCCC
Q 011842 142 VGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAA----RMYRMECVKVDCLISG 217 (476)
Q Consensus 142 ~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~----~~~G~~v~~v~~~~~g 217 (476)
.++.+.+++++|.+. .+++++|+.|+..++.+... ||+.|+++.+.|.+..... ...|+++..++..
T Consensus 64 ~~Le~~lA~l~G~~~----al~~~sG~~Ai~~~l~al~~--~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi~~~~~~~~--- 134 (386)
T PRK06767 64 KLFEERMAVLEGGEE----ALAFGSGMAAISATLIGFLK--AGDHIICSNGLYGCTYGFLEVLEEKFMITHSFCDME--- 134 (386)
T ss_pred HHHHHHHHHHhCCCc----EEEECCHHHHHHHHHHHHhC--CCCEEEEcCCcHHHHHHHHHHHHhhcCeEEEEeCCC---
Confidence 344555788888653 78888889888887777654 9999999999887654433 3346666666543
Q ss_pred ccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCccc
Q 011842 218 EIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKP 297 (476)
Q Consensus 218 ~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~ 297 (476)
|++++++++.++++ +|++++++|++|.+.|+++|.++|+++|+ ++++|++|+.+... .....+
T Consensus 135 --d~~~l~~~i~~~tk---lV~lesp~NptG~v~dl~~I~~la~~~g~-----~vivD~a~a~~~~~-------~pl~~g 197 (386)
T PRK06767 135 --TEADIENKIRPNTK---LIFVETPINPTMKLIDLKQVIRVAKRNGL-----LVIVDNTFCSPYLQ-------RPLELG 197 (386)
T ss_pred --CHHHHHHhhCcCce---EEEEeCCCCCCceecCHHHHHHHHHHcCC-----EEEEECCCcccccC-------CchhcC
Confidence 88999999977665 88889999999999999999999999999 99999999744332 111234
Q ss_pred ccEEEEcCCCCCCCCCC--ceeEEeehhhhhhhcCC-ccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHH
Q 011842 298 IGSVSVSGHKFVGCPMP--CGVQITRMEHINVLSSN-VEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCL 374 (476)
Q Consensus 298 ~Dsi~~s~hK~l~~p~~--~G~l~~~~~~~~~l~~~-~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~ 374 (476)
+|+++.|++|+++++.. .|+++.+++.+..+... ...+ ++. ..++.+|+.+. +.+.+..++++..
T Consensus 198 ~Div~~S~sK~l~g~g~~~gG~v~~~~~~i~~~~~~~~~~~--------g~~--~~~~~a~l~~~--~L~tl~~r~~~~~ 265 (386)
T PRK06767 198 CDAVVHSATKYIGGHGDVVAGVTICKTRALAEKIRPMRKDI--------GGI--MAPFDAWLLLR--GLKTLAVRMDRHC 265 (386)
T ss_pred CcEEEecCcceecCCCCceeEEEEeChHHHHHHHHHHHHHh--------CCC--CCHHHHHHHHc--CCCcHHHHHHHHH
Confidence 89999999999986543 58888888765443211 1111 111 12455565544 3456778889999
Q ss_pred HHHHHHHHHHHhcCC-eEeecC-----------CeeEEEEecCCc----HHHhhceee----------------cc----
Q 011842 375 RNAHYLKDRLLDAGI-SAMLNE-----------LSSTVVFERPQD----EEFVRRWQL----------------AC---- 418 (476)
Q Consensus 375 ~~a~~l~~~L~~~g~-~~~~~~-----------~~~iv~f~~~~~----~~~~~~~~l----------------~~---- 418 (476)
++++++.+.|++.+. ..+..| ..++++|...++ ..|.+.+.+ +.
T Consensus 266 ~~a~~la~~L~~~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~ 345 (386)
T PRK06767 266 DNAEKIVSFLKNHDAVEGVWYPEGELASRQMKRGGGVISFSIKGGKEETQAFINDLHFITIAVSLGDTETLIQHPATMTH 345 (386)
T ss_pred HHHHHHHHHHHcCCCccEEECCCcHHHHHhCCCCCceEEEEEcCCHHHHHHHHHhCCccEEecCCCCcCccccCCCcccc
Confidence 999999999999854 333322 246888887532 234433321 00
Q ss_pred -------------cCCEEEEEEcCCCCHHHHHHHHHHHHHHHH
Q 011842 419 -------------QGNIAHVVVMPNVTIDKLDDFLNELIENRS 448 (476)
Q Consensus 419 -------------~~~~lRv~~~~~~T~edid~~~~~l~~~~~ 448 (476)
..+.+|+++. -||+|.++++|+++.+
T Consensus 346 ~~~~~~~~~~~gi~~~l~R~svG----lE~~~dl~~dl~~al~ 384 (386)
T PRK06767 346 AAIPAELRQEMGIYDNLIRLSVG----LESWEDIVSDLEQALK 384 (386)
T ss_pred ccCCHHHHHhcCCCCCeEEEEec----cCCHHHHHHHHHHHHh
Confidence 0246888876 4667777777777654
No 169
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.83 E-value=5.8e-18 Score=176.89 Aligned_cols=332 Identities=13% Similarity=0.035 Sum_probs=227.1
Q ss_pred CCCCcCCcchHHHHHHHHHhhCCCCCC-cccCccchhhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHH
Q 011842 101 GYPYNLDFDYGALAQLQHFSINNLGDP-FIESNYGVHSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGR 179 (476)
Q Consensus 101 g~p~~~~~~~~~l~~~l~~~~n~~g~~-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~ 179 (476)
|.|....++.....+.+...+.+.... ...+....+..++++.+.+++....|+..++.++++|+|+++|+.+.+.+..
T Consensus 97 g~p~~~~fp~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q~al~l~~~~l~ 176 (459)
T COG1167 97 GLPDPSLFPLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGAQQALDLLLRLLL 176 (459)
T ss_pred CCCCcccCCHHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEEeCCHHHHHHHHHHHhC
Confidence 556666666667777766665544333 3344444578899999999999788888666689999999999998888877
Q ss_pred hhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEe-eCCCccccccC---HHH
Q 011842 180 EVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCADFKAKLLQNKDKPAIINVN-IGTTVKGAVDD---LDL 255 (476)
Q Consensus 180 ~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t-~gtt~tG~id~---l~~ 255 (476)
+ |||.|++.+++|+....+.+.+|++++.||+| +..||++.|++.+.... |.++.++ +..|+||..-+ -++
T Consensus 177 ~--pGd~v~vE~PtY~~~~~~~~~~g~~~~~vp~d-~~G~~~e~le~~~~~~~--~k~~y~~P~~qNPtG~tms~~rR~~ 251 (459)
T COG1167 177 D--PGDTVLVEDPTYPGALQALEALGARVIPVPVD-EDGIDPEALEEALAQWK--PKAVYVTPTFQNPTGVTMSLERRKA 251 (459)
T ss_pred C--CCCEEEEcCCCcHHHHHHHHHcCCcEEecCCC-CCCCCHHHHHHHHhhcC--CcEEEECCCCCCCCCCccCHHHHHH
Confidence 6 99999999999999999999999999999998 56689999999998752 3344443 55888888865 569
Q ss_pred HHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCcc-cccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccc
Q 011842 256 VIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEY 334 (476)
Q Consensus 256 I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~y 334 (476)
|+++|++||+ ||+.|..|+-+.+......+...... .--++..|+.|.+..+.++||++++.++++.+......
T Consensus 252 Ll~lA~~~~~-----~IIEDD~y~el~~~~~p~~~l~~ld~~~rViy~gSFSK~l~PglRlG~vv~p~~~~~~~~~~k~~ 326 (459)
T COG1167 252 LLALAEKYDV-----LIIEDDYYGELRYDGPPPPPLKALDAPGRVIYLGSFSKTLAPGLRLGYVVAPPELIEKLLRLKQA 326 (459)
T ss_pred HHHHHHHcCC-----eEEeeCcchhhhcCCCCCCChHhhCCCCCEEEEeeehhhcccccceeeeeCCHHHHHHHHHHHHH
Confidence 9999999999 99999999877664333322222222 23577889999999999999999999876655332222
Q ss_pred cCCCCCcccCCCCChhHHHHHHHHHHhC--hhcHHHHHHHHHHHHHHHHHHHHhcC--CeEeecCCeeE-EEEecCCc--
Q 011842 335 LASRDATIMGSRNGHAPIFLWYTLNRKG--YKGFQKEVQKCLRNAHYLKDRLLDAG--ISAMLNELSST-VVFERPQD-- 407 (476)
Q Consensus 335 l~~~~~~~~~sr~~~~~l~~~~~l~~~g--~~g~~~~~~~~~~~a~~l~~~L~~~g--~~~~~~~~~~i-v~f~~~~~-- 407 (476)
.. .+.+......+...+. -| .+.++++...+.+..+.+.+.|.+.. ...+..|...+ +.+..+..
T Consensus 327 ~~-------~~~s~~~Q~~la~~l~-~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~~~~~~~~p~gG~flwl~l~~~~~ 398 (459)
T COG1167 327 AD-------LGPSSLSQAALAAFLL-SGHYDRHLRRLRREYARRRDALLEALAEYLPELATWTRPEGGLFLWLELPEGID 398 (459)
T ss_pred hc-------CCCChHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeecCCceEEEEEEcCCCCC
Confidence 11 1111111122222222 22 22344455555668888888888864 33444455444 33445542
Q ss_pred -HHHh-----hceee-c--------c-cCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 011842 408 -EEFV-----RRWQL-A--------C-QGNIAHVVVMPNVTIDKLDDFLNELIENRSTWY 451 (476)
Q Consensus 408 -~~~~-----~~~~l-~--------~-~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~ 451 (476)
.++. ++..+ + . ..+.+|++++. .+.++|+..+..|.++.++..
T Consensus 399 ~~~l~~~a~~~gv~i~~~g~~f~~~~~~~~~~Rl~~s~-~~~e~i~~gi~~l~~~~~~~~ 457 (459)
T COG1167 399 ARELLAAALEKGVVVTPLGSAFSADGDPRNGLRLSFSS-PSEEEIEEGIKRLAALLREAA 457 (459)
T ss_pred HHHHHHHHHHCCCEEEcCCccccCCCCCCCeEEEEcCC-CCHHHHHHHHHHHHHHHHHHh
Confidence 2222 22222 1 1 23589988864 458999999999888877654
No 170
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.83 E-value=2.2e-18 Score=175.96 Aligned_cols=269 Identities=18% Similarity=0.198 Sum_probs=187.8
Q ss_pred HHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHH----HHHcCCeEEEEeCCCCC
Q 011842 142 VGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKA----ARMYRMECVKVDCLISG 217 (476)
Q Consensus 142 ~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~----~~~~G~~v~~v~~~~~g 217 (476)
..+.+.++++.|.+ .+++|+||++|+..++.+... +|+.|+++.+.|.+.... ....|++++.++.
T Consensus 56 ~~Le~~lA~leg~e----~ivvt~gg~~Ai~~~l~all~--~Gd~Il~~~~~y~~~~~~~~~~~~~~gi~v~~vd~---- 125 (388)
T PRK08861 56 GLLEQTLSELESGK----GAVVTNCGTSALNLWVSALLG--PDDLIVAPHDCYGGTYRLFNTRANKGDFKVQFVDQ---- 125 (388)
T ss_pred HHHHHHHHHHhCCC----eEEEECCHHHHHHHHHHHHcC--CCCEEEEcCCchHHHHHHHHHHHhcCCeEEEEECC----
Confidence 34555577888854 389999999999999887755 999999999998764432 2334677777763
Q ss_pred ccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCccc
Q 011842 218 EIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKP 297 (476)
Q Consensus 218 ~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~ 297 (476)
.|++++++++.++++ +|++++++|++|.+.|+++|.++|+++|+ ++++|++|+.+... .. ++ .+
T Consensus 126 -~d~e~l~~~i~~~tk---lV~lesP~NPtG~v~dl~~I~~la~~~gi-----~vIvDea~~~~~~~--~p---l~--~G 189 (388)
T PRK08861 126 -SDAAALDAALAKKPK---LILLETPSNPLVRVVDIAELCQKAKAVGA-----LVAVDNTFLTPVLQ--KP---LE--LG 189 (388)
T ss_pred -CCHHHHHHhcCcCCe---EEEEECCCCCCCcccCHHHHHHHHHHcCC-----EEEEECCccccccC--CC---cc--cC
Confidence 389999999877665 88899999999999999999999999999 99999999765432 11 22 24
Q ss_pred ccEEEEcCCCCCCCCCC--ceeEEeehh-hhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHH
Q 011842 298 IGSVSVSGHKFVGCPMP--CGVQITRME-HINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCL 374 (476)
Q Consensus 298 ~Dsi~~s~hK~l~~p~~--~G~l~~~~~-~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~ 374 (476)
+|+++.|+|||+++|.. .|+++.+++ +.+.+.....++ |.- ..+...|..+ .|.+.+.-++++..
T Consensus 190 aDivv~S~tK~l~G~~d~~gG~i~~~~~~~~~~~~~~~~~~--------G~~--~~p~~a~l~~--rgl~Tl~lR~~~~~ 257 (388)
T PRK08861 190 ADFVIHSTTKYINGHSDVIGGVLITKTKEHAEELAWWGNCI--------GAT--GTPFDSYMTL--RGIRTLGARMRVHE 257 (388)
T ss_pred CCEEEeecceeccCCCcceeEEEEecHHHHHHHHHHHHhcc--------CCC--CChHHHHHHH--hcCCCHHHHHHHHH
Confidence 89999999999998765 677777654 333332111121 111 2245666444 46678899999999
Q ss_pred HHHHHHHHHHHhcCCeE-eecCC-----------------eeEEEEecCCc----HHHhhceeec---------------
Q 011842 375 RNAHYLKDRLLDAGISA-MLNEL-----------------SSTVVFERPQD----EEFVRRWQLA--------------- 417 (476)
Q Consensus 375 ~~a~~l~~~L~~~g~~~-~~~~~-----------------~~iv~f~~~~~----~~~~~~~~l~--------------- 417 (476)
++|..+.+.|++.+... +..|. ..+++|...++ ..|.+.+.+.
T Consensus 258 ~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~gg~~sf~~~~~~~~~~~f~~~l~l~~~~~s~G~~~sl~~~ 337 (388)
T PRK08861 258 ESAQQILAYLQTQSLVGTIYHPSLPEHPGHEIAKKQQSGFGSMLSFEFAGSFEQLKVFVKALALFSLAESLGGVESLICH 337 (388)
T ss_pred HHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhCCCCCceEEEEeCCCHHHHHHHHhcCCcceEccCCCCCcceeeC
Confidence 99999999999987532 22221 24777876432 2343433320
Q ss_pred -c-----------------cCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHh
Q 011842 418 -C-----------------QGNIAHVVVMPNVTIDKLDDFLNELIENRSTWYE 452 (476)
Q Consensus 418 -~-----------------~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~~ 452 (476)
. ..+.+|+++. -||+|.++++|+++.+++.+
T Consensus 338 p~~~~h~~~~~~~~~~~gi~~~liRlsvG----lE~~~dli~Dl~~al~~~~~ 386 (388)
T PRK08861 338 PASMTHRAMGEEALAEAGVSQQLLRLSVG----LEDAQDLIADLDQAFAKAAE 386 (388)
T ss_pred CCcccccccCHHHHHhcCCCCCeEEEEeC----cCCHHHHHHHHHHHHHHHHh
Confidence 0 0246888876 46677777777777766554
No 171
>PLN02242 methionine gamma-lyase
Probab=99.83 E-value=1.6e-18 Score=178.88 Aligned_cols=220 Identities=15% Similarity=0.081 Sum_probs=161.5
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHH-----HHcCCeEEEEeC
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAA-----RMYRMECVKVDC 213 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~-----~~~G~~v~~v~~ 213 (476)
...+++.+.++++.|.+. .++|+||++|+..++.+... +|+.|+++.+.|......+ +..|++++.++.
T Consensus 76 Pt~~~LE~~lA~l~g~~~----~l~~~sG~~Ai~~al~al~~--~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~~d~ 149 (418)
T PLN02242 76 PTVLNLGRQMAALEGTEA----AYCTASGMSAISSVLLQLCS--SGGHVVASNTLYGGTHALLAHFLPRKCNITTTFVDI 149 (418)
T ss_pred hhHHHHHHHHHHHhCCCe----EEEEccHHHHHHHHHHHHhC--CCCEEEEcCCcHHHHHHHHHHhhhhccCceEEEcCC
Confidence 445556667888898874 78999999999999988766 9999999999887665543 457888877765
Q ss_pred CCCCccCHHHHHHHHHcC-CCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCC
Q 011842 214 LISGEIDCADFKAKLLQN-KDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKV 292 (476)
Q Consensus 214 ~~~g~~D~~~Le~~l~~~-~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~ 292 (476)
+ |+++|++++.++ ++ +|++++++|++|.+.|+++|+++|++||+ ++++|++|+.+.... .
T Consensus 150 ~-----d~e~l~~~i~~~~tk---lV~lesp~NPtG~v~dl~~I~~la~~~gi-----~livDea~~~~~~~~------~ 210 (418)
T PLN02242 150 T-----DLEAVKKAVVPGKTK---VLYFESISNPTLTVADIPELARIAHEKGV-----TVVVDNTFAPMVLSP------A 210 (418)
T ss_pred C-----CHHHHHHhcCcCCCE---EEEEecCCCCCCcccCHHHHHHHHHHhCC-----EEEEECCCCccCCCH------H
Confidence 4 899999999763 44 88899999999999999999999999999 999999996433210 1
Q ss_pred CCcccccEEEEcCCCCCCCCC-C-ceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHH
Q 011842 293 SFKKPIGSVSVSGHKFVGCPM-P-CGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEV 370 (476)
Q Consensus 293 ~~~~~~Dsi~~s~hK~l~~p~-~-~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~ 370 (476)
. ..+|+++.|++|+++++. . .|+++.++++++.+...... . ....|.. ...+.+.+...+...+..++
T Consensus 211 ~--~g~divv~S~SK~l~g~g~~~gG~iv~~~~li~~l~~~~~~---~-~~~~g~~----~~~~~A~l~~~~l~tl~~r~ 280 (418)
T PLN02242 211 R--LGADVVVHSISKFISGGADIIAGAVCGPAELVNSMMDLHHG---A-LMLLGPT----MNPKVAFELSERLPHLSLRM 280 (418)
T ss_pred H--cCCcEEEEeCccccCCCCCceEEEEEcCHHHHHHHHHHhhh---h-hhccCCC----CCHHHHHHHHcCCCcHHHHH
Confidence 1 137999999999987543 3 58888777766554321111 0 0112222 12233334445566778888
Q ss_pred HHHHHHHHHHHHHHHhcCCeEee
Q 011842 371 QKCLRNAHYLKDRLLDAGISAML 393 (476)
Q Consensus 371 ~~~~~~a~~l~~~L~~~g~~~~~ 393 (476)
++..++++++.+.|++.++.+..
T Consensus 281 ~~~~~~a~~la~~L~~~~~~V~y 303 (418)
T PLN02242 281 KEHCRRAMEYAKRMKELGLKVIY 303 (418)
T ss_pred HHHHHHHHHHHHHHHhCCCEEEC
Confidence 99999999999999999865543
No 172
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.83 E-value=6.1e-18 Score=174.23 Aligned_cols=292 Identities=15% Similarity=0.098 Sum_probs=190.2
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCC
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLI 215 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~ 215 (476)
+..+||+++.+ ++|.+. +++|+|||.|+..++.+... ||++| ++.+.+.++...+.+.|++++.+++++
T Consensus 54 g~~~Leeaia~----~~g~~~----vv~t~~Gt~Al~la~~al~~--pGD~V-~~~~~f~~~~~~i~~~Ga~pv~v~i~~ 122 (431)
T cd00617 54 SFYDLEDAVQD----LFGFKH----IIPTHQGRGAENILFSILLK--PGRTV-PSNMHFDTTRGHIEANGAVPVDLVIDE 122 (431)
T ss_pred CHHHHHHHHHH----HHCCCe----EEEcCCHHHHHHHHHHHhCC--CCCEE-ccCCcccchHHHHHhCCCEeEEEeccc
Confidence 45577777554 556653 89999999999999888766 89987 466666677778889999999999863
Q ss_pred ----------CCccCHHHHHHHHHcCC-CCcEEEEEeeCCCcc-cccc---CHHHHHHHHHHhCCCCCceEEEEecCccc
Q 011842 216 ----------SGEIDCADFKAKLLQNK-DKPAIINVNIGTTVK-GAVD---DLDLVIQTLEESGFTQDRFYIHCDGALFG 280 (476)
Q Consensus 216 ----------~g~~D~~~Le~~l~~~~-~~p~~vv~t~gtt~t-G~id---~l~~I~~ia~~~g~~~~~~~lhvD~a~~g 280 (476)
.|.+|+++|+++|++++ +++.+|+++.++|++ |.+- ++++|.++|++||+ +||.|+|+..
T Consensus 123 ~~~~~~~~pf~gniD~e~Le~~I~~~~~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi-----~li~DaAr~~ 197 (431)
T cd00617 123 AHDAQELIPFKGNIDVAKLEKLIDEVGAENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGI-----PVVLDAARFA 197 (431)
T ss_pred ccccccccCCCCCcCHHHHHHHhCcccCCCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCC-----EEEEEchhhH
Confidence 25599999999998762 335578888888887 7764 57788999999999 9999999653
Q ss_pred c--cc-----cccccCCCCC----CcccccEEEEcCCCCCCCCCCceeEEeehh-hhhhhcCCccccCCCCCcccCCCCC
Q 011842 281 L--MM-----PFVKKAPKVS----FKKPIGSVSVSGHKFVGCPMPCGVQITRME-HINVLSSNVEYLASRDATIMGSRNG 348 (476)
Q Consensus 281 ~--~~-----~~~~~~~~~~----~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~-~~~~l~~~~~yl~~~~~~~~~sr~~ 348 (476)
. ++ +.....+..+ .....|++++|+||-+++|. .|+++.+++ +.+.+.... +... .....++-++
T Consensus 198 ~na~~i~~r~~g~~~~si~ei~~e~~s~sd~~~mS~~K~~~~~~-GG~i~~~d~~l~~~~~~~~-~~~~-~~~~~gG~~~ 274 (431)
T cd00617 198 ENAYFIKEREEGYRDKSIAEIAREMFSYADGCTMSAKKDGLVNI-GGFLALRDDELYEEARQRV-VLYE-GFVTYGGMAG 274 (431)
T ss_pred hhhhhhhcccccccCCCHHHHHHHhhccCCEEEEEeecCCCCcc-ceEEEeCcHHHHHHHHHhc-cccC-CccccccccH
Confidence 2 11 1111111111 11248999999999888765 568888874 655543111 1000 0111111111
Q ss_pred hhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecCC-----------cHHHh----hc
Q 011842 349 HAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERPQ-----------DEEFV----RR 413 (476)
Q Consensus 349 ~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~-----------~~~~~----~~ 413 (476)
....++..++... .+ .+.+++..+.+++|.+.|++.|+.+..|.+++.+++..+. +..+. .+
T Consensus 275 r~~~A~A~gL~e~-~~--~~~l~~~~~~r~~l~~~L~~~G~~v~~P~Ggh~v~~d~~~~~~~~~~~~~~~~~la~~L~~e 351 (431)
T cd00617 275 RDMEALAQGLREA-VE--EDYLRHRVEQVRYLGDRLDEAGVPIVEPAGGHAVFIDAREFLPHIPQEQFPAQALAAELYLE 351 (431)
T ss_pred HHHHHHHHHHHhc-cc--HHHHHHHHHHHHHHHHHHHHCCCCccCCCcceEEEEEhHHhcCCCCcccCcHHHHHHHHHHH
Confidence 1111111122211 11 3556666778899999999999877766777777765431 22222 11
Q ss_pred eee-------------cc-------cCCEEEEEEcC-CCCHHHHHHHHHHHHHHHHH
Q 011842 414 WQL-------------AC-------QGNIAHVVVMP-NVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 414 ~~l-------------~~-------~~~~lRv~~~~-~~T~edid~~~~~l~~~~~~ 449 (476)
-.+ +. .-..+|+.+.. ..|.+++|.+++.|..+.+.
T Consensus 352 ~gV~~~~~g~~~~~~~~~~~~~~~~~~~~~rl~~prr~~t~~~~~~~~~~~~~~~~~ 408 (431)
T cd00617 352 AGVRAVELGIFSAGRDPNTGENKYPELELVRLAIPRRVYTQDHMDYVAAAVIALYER 408 (431)
T ss_pred cCeeEEeecceecccCCCCCcccCCccceeEEeccccccCHHHHHHHHHHHHHHHhh
Confidence 111 01 12568987754 55999999999999988765
No 173
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=99.83 E-value=1.3e-17 Score=161.29 Aligned_cols=348 Identities=16% Similarity=0.077 Sum_probs=231.0
Q ss_pred cHHHHHHHHHHHHhcccc-----cccCCCCcCCcc---hHHHHHHHHHhhCCCCCCcccCccchhhHHHHHHHHHHHHHH
Q 011842 80 YMAGVLARYRKTLMERTK-----HHLGYPYNLDFD---YGALAQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARL 151 (476)
Q Consensus 80 ~~~~il~~~~~~~~~~~~-----~~~g~p~~~~~~---~~~l~~~l~~~~n~~g~~~~~~~~~~~~~~le~~~~~~la~l 151 (476)
+...++..+......... ...|-|...+.. ..+..++..+....-+++|..+. +...-++++++++-+-
T Consensus 43 tir~i~~~l~~~~~p~~~k~iipl~~GDPsv~~~~~ts~~a~~Av~~al~Sgk~N~Yaps~---G~~~AR~AVAeYl~~~ 119 (447)
T KOG0259|consen 43 TIRGILSALFDCCDPEKKKPILPLGHGDPSVYPCFRTSQEAEQAVVDALRSGKGNGYAPSV---GILPARRAVAEYLNRD 119 (447)
T ss_pred cHHHHHHHHhhcCCcccCceeccCCCCCCCccccccCCHHHHHHHHHHHhcCCCCCcCCcc---ccHHHHHHHHHHhhcC
Confidence 355666665554443331 133445433321 34444555555555555554333 6677888888887665
Q ss_pred cCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCC--CCCccCHHHHHHHHH
Q 011842 152 WELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCL--ISGEIDCADFKAKLL 229 (476)
Q Consensus 152 ~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~--~~g~~D~~~Le~~l~ 229 (476)
+...-+..+.++|+|.++|+-+++.+..+ |+..|+++++++.-+...+...|++++++..- +++++|++.+|..++
T Consensus 120 l~~kl~a~DV~ltsGC~qAIe~~i~~LA~--p~aNILlPrPGfp~Y~~~a~~~~lEVR~ydlLPe~~weIDL~~veal~D 197 (447)
T KOG0259|consen 120 LPNKLTADDVVLTSGCSQAIELAISSLAN--PGANILLPRPGFPLYDTRAIYSGLEVRYYDLLPEKDWEIDLDGVEALAD 197 (447)
T ss_pred CCCccCcCceEEeccchHHHHHHHHHhcC--CCCceecCCCCCchHHHhhhhcCceeEeecccCcccceechHHHHHhhc
Confidence 55443345699999999999999988765 99999999999999999999999999999874 478999999999999
Q ss_pred cCCCCcEEEEEeeCCCccccc---cCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCcccccEEEEc--
Q 011842 230 QNKDKPAIINVNIGTTVKGAV---DDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKPIGSVSVS-- 304 (476)
Q Consensus 230 ~~~~~p~~vv~t~gtt~tG~i---d~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~~Dsi~~s-- 304 (476)
++|. .+++++|+|++|.+ +-|++|+++|+++++ .++.|++|+..++......+--.+...+=+|+..
T Consensus 198 ENT~---AivviNP~NPcGnVys~~HL~kiae~A~klgi-----~vIaDEVY~~~vfg~~pfvpmg~fssiVPVitlggi 269 (447)
T KOG0259|consen 198 ENTV---AIVVINPNNPCGNVYSEDHLKKIAETAKKLGI-----MVIADEVYGHTVFGDKPFVPMGKFSSIVPVITLGGI 269 (447)
T ss_pred cCee---EEEEeCCCCCCcccccHHHHHHHHHHHHHhCC-----eEEehhhcceeecCCCCccchhhccccCceEeeccc
Confidence 9985 77788999999988 569999999999999 9999999998877655554433444434444433
Q ss_pred CCCCCCCCCCceeEEeehhh--hhh---hcCCccccCCCCCcccCCCCChhHHHHHHHHHHh----ChhcHHHHHHHHHH
Q 011842 305 GHKFVGCPMPCGVQITRMEH--INV---LSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRK----GYKGFQKEVQKCLR 375 (476)
Q Consensus 305 ~hK~l~~p~~~G~l~~~~~~--~~~---l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~----g~~g~~~~~~~~~~ 375 (476)
++-|+-.+|+.||++..+.. .+. +..-..++.- . .+...+-| +++..+ -.+-|.....-+..
T Consensus 270 sKrW~VPGWRlGWi~~hD~~gvf~~~~~~q~~~~~~~~-----~---~~p~TiiQ-~AlP~IL~kTp~efF~k~~~~lk~ 340 (447)
T KOG0259|consen 270 SKRWIVPGWRLGWIALHDPRGVFRDTKVVQGIKNFLDI-----I---PGPATIIQ-GALPDILEKTPEEFFDKKLSFLKS 340 (447)
T ss_pred ccccccCCceeeeEEEecccccccchHHHHHHHHHHhc-----c---CCccHhHH-HHhHHHHHhChHHHHHHHHHHHHh
Confidence 45699999999999998752 110 0011112110 0 01112222 223222 23446677777888
Q ss_pred HHHHHHHHHHhcCCeE-eecCCeeEEEE-e--------cCCcHHHhhce----e---ecc----cCCEEEEEEcCCCCHH
Q 011842 376 NAHYLKDRLLDAGISA-MLNELSSTVVF-E--------RPQDEEFVRRW----Q---LAC----QGNIAHVVVMPNVTID 434 (476)
Q Consensus 376 ~a~~l~~~L~~~g~~~-~~~~~~~iv~f-~--------~~~~~~~~~~~----~---l~~----~~~~lRv~~~~~~T~e 434 (476)
+++...++|++.+-.. ...|.+.++.+ . +.++.+|..++ . ++. ..+++|+++. +..+
T Consensus 341 na~l~y~~Lk~IP~l~cp~kPeg~mylmv~l~~s~~~~~~dD~dFc~kL~~Eesv~~LPG~af~~~nw~Ri~i~--~~~~ 418 (447)
T KOG0259|consen 341 NADLCYSRLKDIPCLTCPVKPEGCMYLMVKLNLSLFPDIEDDVDFCQKLAREESVICLPGQAFGLKNWLRIVIT--VEEE 418 (447)
T ss_pred hHHHHHHHHhcCCCcccCcCCCcceEEEeccchhhhccccccHHHHHHHhhhcceEEeccccccCCCeEEEEEc--cChH
Confidence 9999999999986544 34455433333 2 12334454433 1 232 3589999885 5677
Q ss_pred HHHHHHHHHHHHHHHHH
Q 011842 435 KLDDFLNELIENRSTWY 451 (476)
Q Consensus 435 did~~~~~l~~~~~~~~ 451 (476)
.++..++.|++-..+=+
T Consensus 419 ~leea~~Rik~Fc~RH~ 435 (447)
T KOG0259|consen 419 MLEEAFSRIKEFCDRHS 435 (447)
T ss_pred HHHHHHHHHHHHHHhhh
Confidence 88888888888665544
No 174
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.83 E-value=9.6e-18 Score=173.54 Aligned_cols=290 Identities=16% Similarity=0.118 Sum_probs=186.4
Q ss_pred HHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCC-chHHHHHHHHcC-----------
Q 011842 138 RQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRES-HYSVFKAARMYR----------- 205 (476)
Q Consensus 138 ~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~-H~S~~~~~~~~G----------- 205 (476)
.+++.++.+.+++++|.+.+ .+++++||++|+..++.+++...+++.|++.+.. |.+........+
T Consensus 78 ~~~~~~l~~~l~~~~~~~~~--~v~~~~sgsea~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~ 155 (413)
T cd00610 78 NEPAVELAELLLALTPEGLD--KVFFVNSGTEAVEAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPL 155 (413)
T ss_pred CHHHHHHHHHHHHhCCCCCC--EEEEcCcHHHHHHHHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCC
Confidence 37778888899999985433 4999999999999999998765466666666654 444444433332
Q ss_pred -CeEEEEeCCC------CCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC----HHHHHHHHHHhCCCCCceEEEE
Q 011842 206 -MECVKVDCLI------SGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD----LDLVIQTLEESGFTQDRFYIHC 274 (476)
Q Consensus 206 -~~v~~v~~~~------~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~----l~~I~~ia~~~g~~~~~~~lhv 274 (476)
.+++.+|.++ +...|++.|++.+++..+++.+++++...+++|.+.| +++|.++|++||+ ++++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~-----~li~ 230 (413)
T cd00610 156 LPGVLHVPYPYRYRPPAELADDLEALEEALEEHPEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGI-----LLIA 230 (413)
T ss_pred CCCcEEeCCCccccchhhHHHHHHHHHHHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCC-----EEEE
Confidence 2466777652 2345899999999875444567777767888898877 9999999999999 9999
Q ss_pred ecCcccccccccccCCCCCCcc-cccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHH
Q 011842 275 DGALFGLMMPFVKKAPKVSFKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIF 353 (476)
Q Consensus 275 D~a~~g~~~~~~~~~~~~~~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~ 353 (476)
|++|+++... ..... .+... ..|.++++ |+++.++++|+++.++++++.+.. ..+.. ..++. .+......
T Consensus 231 Dev~~g~g~~-g~~~~-~~~~~~~~d~~t~s--K~l~~g~~~g~~~~~~~~~~~~~~-~~~~~--~~t~~--~~~~~~~a 301 (413)
T cd00610 231 DEVQTGFGRT-GKMFA-FEHFGVEPDIVTLG--KGLGGGLPLGAVLGREEIMDAFPA-GPGLH--GGTFG--GNPLACAA 301 (413)
T ss_pred eccccCCCcC-cchhh-HhhcCCCCCeEEEc--ccccCccccEEEEEcHHHHHhhcc-CCCCC--CCCCC--cCHHHHHH
Confidence 9999864211 11100 11111 25766554 999888999999998877766510 11110 01111 11122233
Q ss_pred HHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCC----eEeecCCeeEEEEecCCc-----------HHHh-----hc
Q 011842 354 LWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGI----SAMLNELSSTVVFERPQD-----------EEFV-----RR 413 (476)
Q Consensus 354 ~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~----~~~~~~~~~iv~f~~~~~-----------~~~~-----~~ 413 (476)
..++++.+.. .+..++..++.+++++.|++... .........++.+..+++ ..+. ++
T Consensus 302 ~~a~l~~l~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 378 (413)
T cd00610 302 ALAVLEVLEE---EGLLENAAELGEYLRERLRELAEKHPLVGDVRGRGLMIGIELVKDRATKPPDKELAAKIIKAALERG 378 (413)
T ss_pred HHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhhCCcEEEeecCceEEEEEEecCCCcCCcchHHHHHHHHHHHHCC
Confidence 3344544432 35667778888889888887532 211223345555554321 1121 22
Q ss_pred eeecc-cCCEEEEEEcCCCCHHHHHHHHHHHHHH
Q 011842 414 WQLAC-QGNIAHVVVMPNVTIDKLDDFLNELIEN 446 (476)
Q Consensus 414 ~~l~~-~~~~lRv~~~~~~T~edid~~~~~l~~~ 446 (476)
+.+.. .++.+|++++..+|+++|++++++|+++
T Consensus 379 v~v~~~~~~~lR~~~~~~~t~~~i~~~~~~l~~~ 412 (413)
T cd00610 379 LLLRPSGGNVIRLLPPLIITEEEIDEGLDALDEA 412 (413)
T ss_pred eEEeecCCCEEEEECCCcCCHHHHHHHHHHHHHh
Confidence 33322 2578999999999999999999999765
No 175
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.83 E-value=2.9e-18 Score=177.05 Aligned_cols=300 Identities=11% Similarity=0.015 Sum_probs=189.7
Q ss_pred hhhHHHHHHHHHHHHHHcCCCCCcccEE--EcCCchhHHHHHHHHHHh-hCCCcEEEecCCCchHHHHHHHHcCCeEEEE
Q 011842 135 VHSRQFEVGVLDWFARLWELENNEYWGY--ITNCGTEGNLHGILVGRE-VFPDGILYASRESHYSVFKAARMYRMECVKV 211 (476)
Q Consensus 135 ~~~~~le~~~~~~la~l~g~~~~~~~g~--~t~ggt~An~~al~aa~~-~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v 211 (476)
.|..++++++.+|+.+..+...++.+++ .|.|+++|...++.+.+. ..||+.|++.+++|..+...++.+|++++.+
T Consensus 72 ~G~~~lR~aia~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v 151 (404)
T PTZ00376 72 EGLQSFIEAAQKLLFGEASYALAEKRIATVQALSGTGALRLGFEFLKRFLPAGTTVYVSNPTWPNHVNIFKSAGLNVKEY 151 (404)
T ss_pred CCCHHHHHHHHHHhcCCCccccccCeEEEeeccCcchHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCceeec
Confidence 3567999999999866544321223465 489999998877654321 1389999999999999999999999999999
Q ss_pred eCC--CCCccCHHHHHHHHHcCCCCcEEEEEeeCCCcccccc---CHHHHHHHHHHhCCCCCceEEEEecCccccccccc
Q 011842 212 DCL--ISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVD---DLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFV 286 (476)
Q Consensus 212 ~~~--~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id---~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~ 286 (476)
|+. +++.+|++.+++++.+.+.+..+++++++.|+||.+- .+++|+++|++|++ ||++|++|..+.+...
T Consensus 152 ~l~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~-----~ii~De~Y~~~~~~~~ 226 (404)
T PTZ00376 152 RYYDPKTKGLDFDGMLEDLRTAPNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNL-----IPFFDMAYQGFASGDL 226 (404)
T ss_pred cccCcccCCcCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCc-----EEEEehhhcCccCCCH
Confidence 983 3478999999999975422234777789999999984 47788899999999 9999999987655321
Q ss_pred --ccCCCCCCcc-c-ccEEEEcCCCCCC-CCCCceeEE---eehhhhhhhcCCc-cccCCCCCcccCCCCChhHHHHHHH
Q 011842 287 --KKAPKVSFKK-P-IGSVSVSGHKFVG-CPMPCGVQI---TRMEHINVLSSNV-EYLASRDATIMGSRNGHAPIFLWYT 357 (476)
Q Consensus 287 --~~~~~~~~~~-~-~Dsi~~s~hK~l~-~p~~~G~l~---~~~~~~~~l~~~~-~yl~~~~~~~~~sr~~~~~l~~~~~ 357 (476)
.+.+...... . --++..|+.|.++ +++++||++ .++++++.+.... .+... . ..+ ...+.++++
T Consensus 227 ~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRvG~~~~~~~~~~~~~~l~~~~~~~~~~---~-~~~---~~~~~q~~~ 299 (404)
T PTZ00376 227 DKDAYAIRLFAERGVEFLVAQSFSKNMGLYGERIGALHIVCANKEEAANVLSQLKLIIRP---M-YSS---PPIHGARIA 299 (404)
T ss_pred HHHHHHHHHHHhcCCcEEEEEeCCCcccccccccceEEEEeCCHHHHHHHHHHHHHHHhh---h-cCC---CchHHHHHH
Confidence 1100011111 1 1255577889887 889999984 4444333221110 01000 0 111 113444555
Q ss_pred HHHhChh--------cHHHHHHHHHHHHHHHHHHHHhcCCe---EeecCCeeEEEE-ecCCc--HHHhhceeecccCCEE
Q 011842 358 LNRKGYK--------GFQKEVQKCLRNAHYLKDRLLDAGIS---AMLNELSSTVVF-ERPQD--EEFVRRWQLACQGNIA 423 (476)
Q Consensus 358 l~~~g~~--------g~~~~~~~~~~~a~~l~~~L~~~g~~---~~~~~~~~iv~f-~~~~~--~~~~~~~~l~~~~~~l 423 (476)
...+... .+++..+++.++++.+.+.|++.+.. ....+......| ..+.. ..+.++..+..-.+.
T Consensus 300 ~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~p~gg~f~~~~~~~~~~~~L~~~~~v~v~p~~- 378 (404)
T PTZ00376 300 DRILSDPELRAEWLSELKEMSGRIQNMRQLLYDELKALGSPGDWEHIINQIGMFSFTGLTKEQVERLIEKYHIYLLDNG- 378 (404)
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccCceEEEecCCCHHHHHHHHHhCCEeecCCC-
Confidence 4444221 13444567778899999999987532 222344444433 33221 122222222111112
Q ss_pred EEEEcCCCCHHHHHHHHHHHHHHHH
Q 011842 424 HVVVMPNVTIDKLDDFLNELIENRS 448 (476)
Q Consensus 424 Rv~~~~~~T~edid~~~~~l~~~~~ 448 (476)
|+++.. .+.++++.++++|++...
T Consensus 379 Ris~~~-~~~~~~~~~~~~l~~~~~ 402 (404)
T PTZ00376 379 RISVAG-LTSKNVDYVAEAIHDVVR 402 (404)
T ss_pred eEEEec-cCHHhHHHHHHHHHHHHh
Confidence 998854 899999999999987753
No 176
>PLN02271 serine hydroxymethyltransferase
Probab=99.83 E-value=7.7e-18 Score=174.08 Aligned_cols=297 Identities=12% Similarity=0.067 Sum_probs=200.3
Q ss_pred hHHHHHHHHHHHHHHcCCCCCccc-EEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCc---hHHH------HHHHHcCC
Q 011842 137 SRQFEVGVLDWFARLWELENNEYW-GYITNCGTEGNLHGILVGREVFPDGILYASRESH---YSVF------KAARMYRM 206 (476)
Q Consensus 137 ~~~le~~~~~~la~l~g~~~~~~~-g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H---~S~~------~~~~~~G~ 206 (476)
..++|..+.+...++||++..+.+ -+-.-+|+.||+.++.+... |+|.|+..+..| .+.. +.+...|.
T Consensus 192 iD~iE~la~era~~lF~~~~~~~gaNVQp~SGs~AN~aV~~ALl~--PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~ 269 (586)
T PLN02271 192 IDQIERLCCERALAAFGLDSEKWGVNVQPYSCTSANFAVYTGLLL--PGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASI 269 (586)
T ss_pred HHHHHHHHHHHHHHHhCCcccccccceeeccHHHHHHHHHHHhcC--CCCEEEEecCCCCCchhcccccccccccccccc
Confidence 458999999999999998863321 13445999999999988865 999999876654 4432 22345566
Q ss_pred eEEEEe--CC-CCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccc
Q 011842 207 ECVKVD--CL-ISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMM 283 (476)
Q Consensus 207 ~v~~v~--~~-~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~ 283 (476)
.+..+| ++ ++|.+|+++|++.+.. .+|.+|++....++ ..-|+++|.++|+++|+ ++++|+||..+.+
T Consensus 270 ~~~~vpY~~d~~~g~IDyd~lek~a~~--~rPKLII~g~Sayp--r~~D~~~i~eIAdevGA-----~LmvD~AH~aGLI 340 (586)
T PLN02271 270 FFESLPYKVNPQTGYIDYDKLEEKALD--FRPKILICGGSSYP--REWDYARFRQIADKCGA-----VLMCDMAHISGLV 340 (586)
T ss_pred eEEEEEcccccccCccCHHHHHHHhhh--cCCeEEEECchhcc--CcCCHHHHHHHHHHcCC-----EEEEECccccccc
Confidence 554444 65 5689999999995432 23457777543333 66899999999999999 9999999987776
Q ss_pred cccccCCCCCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcC----------CccccC---CC-CCcccCCCCCh
Q 011842 284 PFVKKAPKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSS----------NVEYLA---SR-DATIMGSRNGH 349 (476)
Q Consensus 284 ~~~~~~~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~----------~~~yl~---~~-~~~~~~sr~~~ 349 (476)
+...+...+. .+|+++++.||||.+|.| |+++++++....... .++|.. .. -+.++++....
T Consensus 341 a~g~~~sP~~---~aDvvt~TTHKtLrGPrG-G~I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~ 416 (586)
T PLN02271 341 AAKECVNPFD---YCDIVTSTTHKSLRGPRG-GIIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNN 416 (586)
T ss_pred ccCcCCCCCc---CCcEEEeCCcccCCCCCc-eEEEecccccccccCCccccccccccHHHHHHhhcccCCccccChhHH
Confidence 5443322222 389999999999999998 888887642211100 001100 00 02345555445
Q ss_pred hHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCC-eeEEEEecCC----cHH---Hhhcee------
Q 011842 350 APIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNEL-SSTVVFERPQ----DEE---FVRRWQ------ 415 (476)
Q Consensus 350 ~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~-~~iv~f~~~~----~~~---~~~~~~------ 415 (476)
...++..+++......++++.++..+|++.|.+.|.+.|+.++.... +..+.+.... ... .+....
T Consensus 417 ~IAalAvalkea~~~efk~Ya~QVv~NAkaLA~~L~~~G~~vv~ggTdnHlvLvDl~~~g~~G~~ae~~Le~~~I~~Nkn 496 (586)
T PLN02271 417 HIAALAIALKQVATPEYKAYMQQVKKNAQALASALLRRKCRLVTGGTDNHLLLWDLTTLGLTGKNYEKVCEMCHITLNKT 496 (586)
T ss_pred HHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHCCCeEeeCCCCcceeeecCcccCCCHHHHHHHHHHcCeEeccc
Confidence 56667778887766778999999999999999999999998775332 4555554321 111 222112
Q ss_pred -ecc-----cCCEEEEEE----cCCCCHHHHHHHHHHHHHHHH
Q 011842 416 -LAC-----QGNIAHVVV----MPNVTIDKLDDFLNELIENRS 448 (476)
Q Consensus 416 -l~~-----~~~~lRv~~----~~~~T~edid~~~~~l~~~~~ 448 (476)
++. ....+|+.+ .....++|++.+.+.|.++.+
T Consensus 497 ~iP~d~~~~~psGiRiGT~alT~rG~~e~d~~~iA~~i~~~~~ 539 (586)
T PLN02271 497 AIFGDNGTISPGGVRIGTPAMTSRGCLESDFETIADFLLRAAQ 539 (586)
T ss_pred cCCCCCCCCCCCcccccCHHHHhcCCCcHHHHHHHHHHHHHHh
Confidence 221 135688865 445578999999988888776
No 177
>PRK03321 putative aminotransferase; Provisional
Probab=99.82 E-value=1.3e-18 Score=176.25 Aligned_cols=278 Identities=12% Similarity=0.045 Sum_probs=191.7
Q ss_pred HHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCC
Q 011842 138 RQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISG 217 (476)
Q Consensus 138 ~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g 217 (476)
.+++++ +++++|+++ ..+++|+|+++++..++.+... ||+.|+++.+++..+...++..|++++.+|.++++
T Consensus 60 ~~lr~~----ia~~~~~~~--~~I~~~~G~~~~l~~~~~~~~~--~gd~Vli~~p~y~~~~~~~~~~g~~~~~v~~~~~~ 131 (352)
T PRK03321 60 VELRAA----LAEHLGVPP--EHVAVGCGSVALCQQLVQATAG--PGDEVIFAWRSFEAYPILVQVAGATPVQVPLTPDH 131 (352)
T ss_pred HHHHHH----HHHHhCcCH--HHEEECCCHHHHHHHHHHHhcC--CCCEEEeCCCCHHHHHHHHHHcCCEEEEccCCCCC
Confidence 455555 555667654 3588999998888777666544 89999999999888888889999999999998778
Q ss_pred ccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHH--hCCCCCceEEEEecCcccccccccccCCCCCCc
Q 011842 218 EIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEE--SGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFK 295 (476)
Q Consensus 218 ~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~--~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~ 295 (476)
.+|++++++.+.++++ +|+++++++++|.+-|.++|.++|++ +++ ++++|++|+.+..... ..+.+...
T Consensus 132 ~~~~~~l~~~~~~~~~---~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~-----~ii~De~y~~~~~~~~-~~~~~~~~ 202 (352)
T PRK03321 132 THDLDAMAAAITDRTR---LIFVCNPNNPTGTVVTPAELARFLDAVPADV-----LVVLDEAYVEYVRDDD-VPDGLELV 202 (352)
T ss_pred CCCHHHHHHhhccCCC---EEEEeCCCCCcCCCcCHHHHHHHHHhCCCCe-----EEEEechHHHhccCcC-CCcHHHHH
Confidence 8999999999976554 77778999999999999999999997 477 9999999986554221 11111111
Q ss_pred c-ccc-EEEEcCCCCCC-CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHh-ChhcHHHHHH
Q 011842 296 K-PIG-SVSVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRK-GYKGFQKEVQ 371 (476)
Q Consensus 296 ~-~~D-si~~s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~-g~~g~~~~~~ 371 (476)
. .-+ +++.|+.|.++ .++++|++++++++++.+.... . ... ...+.+.+++..+ ..+.+.+.++
T Consensus 203 ~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~~~~~~~~~~~--~-----~~~-----~s~~~q~~a~~~l~~~~~~~~~~~ 270 (352)
T PRK03321 203 RDHPNVVVLRTFSKAYGLAGLRVGYAVGHPEVIAALRKVA--V-----PFS-----VNSLAQAAAIASLAAEDELLERVD 270 (352)
T ss_pred hhCCCEEEEecchHHhhhHHHhhhhhcCCHHHHHHHHHhc--C-----CCC-----CCHHHHHHHHHHhcCHHHHHHHHH
Confidence 1 122 45567889886 6789999999887776654321 0 011 1234444444443 2234555666
Q ss_pred HHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecCC-cHHHhh-----ceee-cccCCEEEEEEcCCCCHHHHHHHHHHHH
Q 011842 372 KCLRNAHYLKDRLLDAGISAMLNELSSTVVFERPQ-DEEFVR-----RWQL-ACQGNIAHVVVMPNVTIDKLDDFLNELI 444 (476)
Q Consensus 372 ~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~-~~~~~~-----~~~l-~~~~~~lRv~~~~~~T~edid~~~~~l~ 444 (476)
+..+.++++.+.|++.|+. ..++..+.+.++.+. ..++.+ +..+ +...+.+|+++ .+.++++.|+++|+
T Consensus 271 ~~~~~r~~~~~~L~~~~~~-~~~~~g~~i~i~l~~~~~~~~~~l~~~gI~v~~~~~~~iRi~~---~~~~~~~~~~~al~ 346 (352)
T PRK03321 271 AVVAERDRVRAALRAAGWT-VPPSQANFVWLPLGERTADFAAAAAEAGVVVRPFAGEGVRVTI---GAPEENDAFLRAAR 346 (352)
T ss_pred HHHHHHHHHHHHHHHCCCc-cCCCCCCEEEEeCCCCHHHHHHHHHHCCEEEEccCCCcEEEee---CCHHHHHHHHHHHH
Confidence 6667778899999888764 334445566666543 233332 2222 23345699987 68999999999998
Q ss_pred HHHH
Q 011842 445 ENRS 448 (476)
Q Consensus 445 ~~~~ 448 (476)
++.+
T Consensus 347 ~~~~ 350 (352)
T PRK03321 347 AWRA 350 (352)
T ss_pred HHhc
Confidence 8754
No 178
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.82 E-value=3.9e-19 Score=174.89 Aligned_cols=329 Identities=15% Similarity=0.112 Sum_probs=222.7
Q ss_pred HhcccccccCCCCcCCcc-hHHHHHHHHHhhCCCCCCcccCccchhhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhH
Q 011842 92 LMERTKHHLGYPYNLDFD-YGALAQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELENNEYWGYITNCGTEG 170 (476)
Q Consensus 92 ~~~~~~~~~g~p~~~~~~-~~~l~~~l~~~~n~~g~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~A 170 (476)
++.++.+|+|+-.+.+.- ...+..+..+.++..+...+. +..++++++.+..|+++|.++ +++.+-|-..
T Consensus 139 lNlgSYNYLGFa~~~g~ca~~~~~~~~kygl~~css~~e~-----G~~~~hkelE~l~A~f~g~e~----a~vF~mGf~T 209 (519)
T KOG1357|consen 139 LNLGSYNYLGFAQSVGPCAEASLKSFDKYGLSRCSSRHEA-----GTTEEHKELEELVARFLGVED----AIVFSMGFAT 209 (519)
T ss_pred eeecccccccccccCCcCChHHHHHHHHhcccccccchhc-----ccHHHHHHHHHHHHHhcCCcc----eEEEeccccc
Confidence 444566677766666554 344455556666655554444 456899999999999999985 5555555555
Q ss_pred HHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccCHHHHHHHHHcC-------CCCc---EEEEE
Q 011842 171 NLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCADFKAKLLQN-------KDKP---AIINV 240 (476)
Q Consensus 171 n~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~~~Le~~l~~~-------~~~p---~~vv~ 240 (476)
|-..+-+... |+..|+.++.+|.|+...|++.|+.++.+.++ |+.+||+.|.+. |.+| .+|++
T Consensus 210 Ns~~~p~l~~--~gsLIiSDelNHaSi~~GaRLSgAtiRVfkHN-----dm~~LEr~Lrd~I~~gqP~Thrp~kki~iiv 282 (519)
T KOG1357|consen 210 NSMNIPSLLG--KGSLIISDELNHASLITGARLSGATTRVFRHN-----DMQGLERLLRDAIVYGQPKTHRPWKKILICV 282 (519)
T ss_pred cccCcceeec--CCcceeeccccchheeccccccCceEEEEecC-----CHHHHHHHHHHHHhcCCCCcCCcchheeeee
Confidence 5444444444 88999999999999999999999999999998 889999988653 3333 34444
Q ss_pred eeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccc-cccccCCCCCCcc--cccEEEEcCCCCCCCCCCcee
Q 011842 241 NIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMM-PFVKKAPKVSFKK--PIGSVSVSGHKFVGCPMPCGV 317 (476)
Q Consensus 241 t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~-~~~~~~~~~~~~~--~~Dsi~~s~hK~l~~p~~~G~ 317 (476)
-.-.++-|.+.+++++.+++|+|.. +++.|+||+.+.. +..+....+-+.. .+|++...+.|.+++ ..|+
T Consensus 283 egiysmEg~iv~Lp~vvalkkkyka-----yl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSfga--~GGy 355 (519)
T KOG1357|consen 283 EGIYSMEGTIVDLPEVVALKKKYKA-----YLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSFGA--AGGY 355 (519)
T ss_pred ccceeccCeecccHHHHHhhccccE-----EEEeeccccccccCCCCcceeeccCCCchhheeecceehhhccc--ccce
Confidence 4448899999999999999999999 9999999987665 4444433333322 389999999999985 3455
Q ss_pred EEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHH-HHHHHHh----ChhcHHHHHHHHHHHHHHHHHHHHhcCCeEe
Q 011842 318 QITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFL-WYTLNRK----GYKGFQKEVQKCLRNAHYLKDRLLDAGISAM 392 (476)
Q Consensus 318 l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~-~~~l~~~----g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~ 392 (476)
+..++++++.+.....+. ...+....+.+.+ ..+++.+ |...-++.++++.++++||+..|+..|+.+.
T Consensus 356 iagsk~lid~lrt~s~~~------~yat~~sppvaqq~~ssl~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~~gfivy 429 (519)
T KOG1357|consen 356 IAGSKELIDYLRTPSPSA------LYATSLSPPVAQQILTSVKHIMGEDGTNRGRQKIERLAENSRYFRWELQKMGFIVY 429 (519)
T ss_pred ecCcHHHHhhhccCCCce------eecccCChHHHHHHHHHHHhhcCCCcccHHHHHHHHHHhhhHHHHHhhhcCcEEEe
Confidence 666666665553332221 1111111112222 1233332 3445688999999999999999999998776
Q ss_pred ecCCeeEEEEec--CC-cH----HHhhc-eee-----cc---cCCEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Q 011842 393 LNELSSTVVFER--PQ-DE----EFVRR-WQL-----AC---QGNIAHVVVMPNVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 393 ~~~~~~iv~f~~--~~-~~----~~~~~-~~l-----~~---~~~~lRv~~~~~~T~edid~~~~~l~~~~~~ 449 (476)
.+..++++.+-. |. -. +..++ +.+ |+ ...+.|++.+.++|.|++|.+++.+.++.+.
T Consensus 430 G~~dSpVvplll~~~~k~~~f~r~~l~~nigvVvvgfPatpl~e~r~R~c~Sa~ht~e~ld~~l~~i~~~g~~ 502 (519)
T KOG1357|consen 430 GNNDSPVVPLLLYGPAKIVAFSREMLERNIGVVVVGFPATPLLESRARFCLSASHTKEDLDRALEVIDRVGDE 502 (519)
T ss_pred cCCCCCcceeeecCcccccHHHHHHHhcCceEEEEeCCCchHHHhHHHhhhcccccHHHHHHHHHHHhhhchh
Confidence 666665544321 21 11 22221 221 22 2356799999999999999999999988744
No 179
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.82 E-value=1.4e-17 Score=157.08 Aligned_cols=297 Identities=15% Similarity=0.148 Sum_probs=221.9
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchH--HHHHHHHcCCeEEEEeC
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYS--VFKAARMYRMECVKVDC 213 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S--~~~~~~~~G~~v~~v~~ 213 (476)
...++.+++.+-+...|..... ..-++..+|+.+.-.|+....+ |||.|++-...-++ +...++.+|+++..|+.
T Consensus 47 e~~qIm~~v~egikyVFkT~n~-~tf~isgsGh~g~E~al~N~le--Pgd~vLv~~~G~wg~ra~D~~~r~ga~V~~v~~ 123 (385)
T KOG2862|consen 47 EFVQIMDEVLEGIKYVFKTANA-QTFVISGSGHSGWEAALVNLLE--PGDNVLVVSTGTWGQRAADCARRYGAEVDVVEA 123 (385)
T ss_pred HHHHHHHHHHHHHHHHhccCCC-ceEEEecCCcchHHHHHHhhcC--CCCeEEEEEechHHHHHHHHHHhhCceeeEEec
Confidence 5568888888888888876643 3456666777777777777766 99998887777666 45788999999999998
Q ss_pred CCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC-HHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCC
Q 011842 214 LISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD-LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKV 292 (476)
Q Consensus 214 ~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~-l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~ 292 (476)
+....+.++.++++|.+++ |.+|.++++.|.||..+| ++.+.++|++|+. +++||++-+-+..+ +
T Consensus 124 ~~G~~~~le~i~~~lsqh~--p~~vfv~hgdsSTgV~q~~~~~~g~lc~k~~~-----lllVD~VaSlggt~-------F 189 (385)
T KOG2862|consen 124 DIGQAVPLEEITEKLSQHK--PKAVFVTHGDSSTGVLQDLLAISGELCHKHEA-----LLLVDTVASLGGTE-------F 189 (385)
T ss_pred CcccCccHHHHHHHHHhcC--CceEEEEecCccccccchHHHHHHHHhhcCCe-----EEEEechhhcCCcc-------c
Confidence 8888899999999999864 568999999999999999 7788899999999 99999997755555 5
Q ss_pred CCccc-ccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCC----cc-ccCC--------CC---CcccCCCCChhHHHHH
Q 011842 293 SFKKP-IGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSN----VE-YLAS--------RD---ATIMGSRNGHAPIFLW 355 (476)
Q Consensus 293 ~~~~~-~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~----~~-yl~~--------~~---~~~~~sr~~~~~l~~~ 355 (476)
.+.+. +|+....+.|.+++|.|.+.+..+++..+.+..+ .. |+.. ++ ..+--+.+......+-
T Consensus 190 ~mDewgVDvaytgSQKaL~aP~GLsiisfS~ka~~~~~~rK~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr 269 (385)
T KOG2862|consen 190 EMDEWGVDVAYTGSQKALGAPAGLSIISFSDKALEAIRDRKTKPVSFYFDILRLGNFWGCDGEPRAYHHTPPVQLLYSLR 269 (385)
T ss_pred eehhhcccEEEecchhhcCCCCCcceeecCHHHHHHHhhccCCceEEEEeHHhhcchhccCCcccccccCCcHHHHHHHH
Confidence 55565 9999999999999999999999988765554221 22 3221 11 1123344545566788
Q ss_pred HHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecC------CeeEEEEecC-CcHH----Hhhceee-------c
Q 011842 356 YTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNE------LSSTVVFERP-QDEE----FVRRWQL-------A 417 (476)
Q Consensus 356 ~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~------~~~iv~f~~~-~~~~----~~~~~~l-------~ 417 (476)
++|+.+-.+|+++.+++.++++++|+..|++.|....... ....|..... +..+ .++.+.+ +
T Consensus 270 ~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~GLq~fv~~e~~rlptvttv~vp~gvDw~dVv~~~~~~~~vei~gglg~ 349 (385)
T KOG2862|consen 270 AALALIAEEGLENSWRRHREMSKWLKLSLEALGLQLFVVDEELRLPTVTTVKVPYGVDWKDVVAYAMSHYVVEIGGGLGP 349 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccceecChhhccCcceeeecCCCCCHHHHHHHHHHhcCEEeccccCC
Confidence 8888888999999999999999999999999998655422 1222322221 2122 2334444 2
Q ss_pred ccCCEEEEEE-cCCCCHHHHHHHHHHHHHHHHH
Q 011842 418 CQGNIAHVVV-MPNVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 418 ~~~~~lRv~~-~~~~T~edid~~~~~l~~~~~~ 449 (476)
..+..+||.+ .-+.+.|-||..++.|+...++
T Consensus 350 ~~gKv~RIGl~gcna~~e~i~~v~~ll~~alq~ 382 (385)
T KOG2862|consen 350 TVGKVFRIGLLGCNANVEYIDNVVELLKLALQR 382 (385)
T ss_pred CcccEEEEEEeeccCCcHHHHHHHHHHHHHHhh
Confidence 3467899964 5566899999999999887654
No 180
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.82 E-value=3e-18 Score=175.00 Aligned_cols=276 Identities=12% Similarity=0.023 Sum_probs=191.2
Q ss_pred HHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccCHH
Q 011842 143 GVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCA 222 (476)
Q Consensus 143 ~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~~ 222 (476)
.+++.+++++|++++ ++++|+|+++++...+.+... +|+.|++..++|..+...++..|++++.++.++++.+|++
T Consensus 75 ~lr~~ia~~~~~~~~--~i~~t~G~~~~l~~~~~~~~~--~gd~vli~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~ 150 (371)
T PRK05166 75 ALREAIAARTGVPAD--RIILGNGSEDLIAVICRAVLR--PGDRVVTLYPSFPLHEDYPTMMGARVERVTVTPDLGFDLD 150 (371)
T ss_pred HHHHHHHHHhCcCHH--HEEEcCCHHHHHHHHHHHhcC--CCCEEEEcCCChHHHHHHHHHcCCeEEEeecCCCCCCCHH
Confidence 345556677788643 599999999998877776654 8999999999999999999999999999999878899999
Q ss_pred HHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHH--hCCCCCceEEEEecCcccccccccccCCCCCC-ccc--
Q 011842 223 DFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEE--SGFTQDRFYIHCDGALFGLMMPFVKKAPKVSF-KKP-- 297 (476)
Q Consensus 223 ~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~--~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~-~~~-- 297 (476)
+|++.+.++++ +|++++++|+||.+.+.+++.++++. .+. ++++|++|+.+... ....+.+.. .+.
T Consensus 151 ~l~~~~~~~~~---~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~-----~ii~De~y~~~~~~-~~~~~~~~~~~~~~~ 221 (371)
T PRK05166 151 ALCAAVARAPR---MLMFSNPSNPVGSWLTADQLARVLDATPPET-----LIVVDEAYAEYAAG-DDYPSALTLLKARGL 221 (371)
T ss_pred HHHHhhhcCCC---EEEEeCCCCCCCCCCCHHHHHHHHHhCCCCc-----EEEEECcHHHhcCC-cCcccHHHHHhhcCC
Confidence 99999977665 77789999999999998888777774 356 99999999765521 111111111 111
Q ss_pred ccEEEEcCCCCCC-CCCCceeEEee-hhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhC-hhcHHHHHHHHH
Q 011842 298 IGSVSVSGHKFVG-CPMPCGVQITR-MEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKG-YKGFQKEVQKCL 374 (476)
Q Consensus 298 ~Dsi~~s~hK~l~-~p~~~G~l~~~-~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g-~~g~~~~~~~~~ 374 (476)
-.++..|+.|.++ +++++|++++. +++.+.+.....+. + ...+.+.+++..+. ...+++.++...
T Consensus 222 ~vi~i~SfSK~~~l~GlRiG~~i~~~~~l~~~~~~~~~~~---------~---~~~~~q~~~~~~l~~~~~~~~~~~~~~ 289 (371)
T PRK05166 222 PWIVLRTFSKAYGLAGLRVGYGLVSDPELVGLLDRVRTPF---------N---VNGAAQAAALAALDDEEHLAKGVALAL 289 (371)
T ss_pred CEEEEeechHhhhcchhheeeeecCCHHHHHHHHHhccCC---------C---CCHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 1356778899886 89999998875 44555443211111 1 11234434444432 234666677788
Q ss_pred HHHHHHHHHHHhcCCeEeecCCeeEEEEecCC-cHHHh-----hceeec-c----cCCEEEEEEcCCCCHHHHHHHHHHH
Q 011842 375 RNAHYLKDRLLDAGISAMLNELSSTVVFERPQ-DEEFV-----RRWQLA-C----QGNIAHVVVMPNVTIDKLDDFLNEL 443 (476)
Q Consensus 375 ~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~-~~~~~-----~~~~l~-~----~~~~lRv~~~~~~T~edid~~~~~l 443 (476)
++++++.+.|++.|+. +.++.++.+.+..+. +.++. ++..+. . ..+.+|+++. +.++.++|.++|
T Consensus 290 ~~r~~l~~~L~~~g~~-~~p~~g~fl~~~~~~~~~~l~~~l~~~gi~v~p~~~~~~~~~iRi~~~---~~~~~~~l~~~l 365 (371)
T PRK05166 290 AERERLKKELAEMGYR-IAPSRANFLFFDARRPASAVAEALLRQGVIVKPWKQPGFETFIRVSIG---SPEENDHFVAAL 365 (371)
T ss_pred HHHHHHHHHHHHCcCe-eCCCcCCEEEEeCCCCHHHHHHHHHHCCeEEecCCCCCCCCeEEEEcC---CHHHHHHHHHHH
Confidence 8889999999998864 445556666666543 23332 222221 1 2468999886 688899999998
Q ss_pred HHHH
Q 011842 444 IENR 447 (476)
Q Consensus 444 ~~~~ 447 (476)
+++.
T Consensus 366 ~~i~ 369 (371)
T PRK05166 366 DKVL 369 (371)
T ss_pred HHHh
Confidence 7753
No 181
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.82 E-value=9.3e-18 Score=176.05 Aligned_cols=295 Identities=12% Similarity=0.061 Sum_probs=200.9
Q ss_pred hhHHHHHHHHHHHHHHcCCC--CCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHH-HcCCeEEEEe
Q 011842 136 HSRQFEVGVLDWFARLWELE--NNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAAR-MYRMECVKVD 212 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~--~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~-~~G~~v~~v~ 212 (476)
+..++++++++++.+.+|.. .+...+++|+|+++++...+.+..+ ||+.|+++++.|..+...+. ..|++++.||
T Consensus 87 G~~~LR~aiA~~l~~~~~~~~~v~~~~Iiit~Ga~~al~~l~~~l~~--pGd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~ 164 (468)
T PLN02450 87 GLPAFKNALAEFMSEIRGNKVTFDPNKLVLTAGATSANETLMFCLAE--PGDAFLLPTPYYPGFDRDLKWRTGVEIVPIH 164 (468)
T ss_pred ChHHHHHHHHHHHHHhhCCCCCcChHHeEEccChHHHHHHHHHHhCC--CCCEEEECCCCCCchHHHHhhcCCcEEEEEe
Confidence 55689999999999877732 2334699999999999888887776 99999999999999888777 5899999999
Q ss_pred CC--CCCccCHHHHHHHHHcC---CCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCccccccc
Q 011842 213 CL--ISGEIDCADFKAKLLQN---KDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMP 284 (476)
Q Consensus 213 ~~--~~g~~D~~~Le~~l~~~---~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~ 284 (476)
++ .+..+|++.|++++.+. +.++.+|++++|+||||.+-+ +++|+++|++|++ ||++|++|+...+.
T Consensus 165 ~~~~~~~~~~~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~-----~iI~DE~Y~~~~f~ 239 (468)
T PLN02450 165 CSSSNGFQITESALEEAYQQAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNI-----HLISDEIYSGTVFD 239 (468)
T ss_pred cCCccCCcCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCc-----EEEEEccccccccC
Confidence 85 34578999999988652 234557788899999999865 6778888999999 99999999875443
Q ss_pred ccccCCCCCC----------cccccEEEEcCCCCCC-CCCCceeEEeehhh-hhhhcCCccccCCCCCcccCCCCChhHH
Q 011842 285 FVKKAPKVSF----------KKPIGSVSVSGHKFVG-CPMPCGVQITRMEH-INVLSSNVEYLASRDATIMGSRNGHAPI 352 (476)
Q Consensus 285 ~~~~~~~~~~----------~~~~Dsi~~s~hK~l~-~p~~~G~l~~~~~~-~~~l~~~~~yl~~~~~~~~~sr~~~~~l 352 (476)
.....+.+.. ...--.+..++.|.++ +++++|+++++++. .+.+.....|. . ...+
T Consensus 240 ~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~li~~~~~l~~~~~~~~~~~---------~---~s~~ 307 (468)
T PLN02450 240 SPGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLGLPGFRVGAIYSNDEMVVSAATKMSSFG---------L---VSSQ 307 (468)
T ss_pred CCCcccHHHHhhhcccccCCCCCcEEEEEeccccCCCCCccEEEEEECCHHHHHHHHHHhhcC---------C---CCHH
Confidence 2111111110 0111245678889775 89999999998663 44332221121 0 1124
Q ss_pred HHHHHHHHhChh-----cHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCee-EEEEecCC---c----H--HH----h--
Q 011842 353 FLWYTLNRKGYK-----GFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSS-TVVFERPQ---D----E--EF----V-- 411 (476)
Q Consensus 353 ~~~~~l~~~g~~-----g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~-iv~f~~~~---~----~--~~----~-- 411 (476)
.+.++...+... -+++..+++.+.++.+.+.|++.|+.. .++..+ .+.++.+. . . ++ .
T Consensus 308 ~Q~a~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~~~gi~~-~~~~~g~flwi~l~~~~~~~~~~~~~~l~~~ll~~ 386 (468)
T PLN02450 308 TQYLLSALLSDKKFTKNYLEENQKRLKQRQKKLVSGLEAAGIKC-LKSNAGLFCWVDMRHLLKSNTFEAEMELWKKIVYE 386 (468)
T ss_pred HHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCcc-cCCCceEEEEEEchHhcCcCCchHHHHHHHHHHHh
Confidence 444444444332 245667778888899999999987643 344444 44445431 1 1 11 1
Q ss_pred hceeecc-------cCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 011842 412 RRWQLAC-------QGNIAHVVVMPNVTIDKLDDFLNELIENRSTWY 451 (476)
Q Consensus 412 ~~~~l~~-------~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~ 451 (476)
.+..+.. ..+++|+++.. .+.++++..++.|+++.+...
T Consensus 387 ~gV~v~PG~~f~~~~~g~~Rl~f~~-~~~~~l~~~l~ri~~~l~~~~ 432 (468)
T PLN02450 387 VKLNISPGSSCHCTEPGWFRVCFAN-MSEETLDLAMKRLKSFVESDS 432 (468)
T ss_pred CCEEEeCccccCCCCCCEEEEEecC-CCHHHHHHHHHHHHHHHHhcc
Confidence 1333321 13689999875 457899999999888765543
No 182
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.82 E-value=7.4e-18 Score=174.35 Aligned_cols=290 Identities=11% Similarity=0.027 Sum_probs=188.1
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCe--------
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRME-------- 207 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~-------- 207 (476)
+..++++++++|+.+..|++.++.++++|+|+++++... ..+.. ||+.|++.+++|..+...++..|++
T Consensus 77 G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~l-~~~~~--~gd~V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~ 153 (409)
T PRK07590 77 GYDFLREKIAENDYQARGCDISADEIFISDGAKCDTGNI-LDIFG--PDNTIAVTDPVYPVYVDTNVMAGRTGEANEDGR 153 (409)
T ss_pred CCHHHHHHHHHHHHHhcCCcCChhhEEECCCHHHHHHHH-HHhcC--CCCEEEEeCCCCcchHHHHHHcCCccccccccc
Confidence 567999999999887777765556799999999997763 33433 8999999999999999999999987
Q ss_pred ---EEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCcccc
Q 011842 208 ---CVKVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGL 281 (476)
Q Consensus 208 ---v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~ 281 (476)
++.+|++.++.+.++ ++ ++ ++.+|+++++.|+||.+-+ +++|+++|++|++ ||++|++|+.+
T Consensus 154 ~~~~~~v~~~~~~~~~~d-~~---~~---~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~-----~iI~De~Y~~~ 221 (409)
T PRK07590 154 YSGIVYLPCTAENNFVPE-LP---EE---KVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGS-----LILFDAAYEAF 221 (409)
T ss_pred ccceeEeecccccCCccc-Cc---cc---CceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCe-----EEEEEccchhh
Confidence 888998754333332 11 12 3347777799999999855 6778888999999 99999999865
Q ss_pred cccccccCCCCCCcc--cccEEEEcCCCCCC-CCCCceeEEeehhhhhhhcCC------ccccCCCCCcccCCCCChhHH
Q 011842 282 MMPFVKKAPKVSFKK--PIGSVSVSGHKFVG-CPMPCGVQITRMEHINVLSSN------VEYLASRDATIMGSRNGHAPI 352 (476)
Q Consensus 282 ~~~~~~~~~~~~~~~--~~Dsi~~s~hK~l~-~p~~~G~l~~~~~~~~~l~~~------~~yl~~~~~~~~~sr~~~~~l 352 (476)
........+...... ..-++..|+.|.++ +++++|++++++++++.+... ..+........ .+ ...+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~pGlRiG~~i~~~~li~~~~~~~~~~~~~~~~~~~~~~~-~~---~s~~ 297 (409)
T PRK07590 222 ISDPSLPHSIYEIEGARECAIEFRSFSKTAGFTGTRCAYTVVPKELKGKTSDGEGVSLNSLWNRRQSTKF-NG---VSYI 297 (409)
T ss_pred ccCCCCCcchhhCCCcccceEEEecCccccCCcCceeEEEEcCHHHhhhccccchhhhHHHHHHHHhhcc-cC---cCHH
Confidence 543211111111111 12245678999884 899999999988776522100 00000000001 11 1234
Q ss_pred HHHHHHHHh---ChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecCC---cHHHh----h--ceee-cc-
Q 011842 353 FLWYTLNRK---GYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERPQ---DEEFV----R--RWQL-AC- 418 (476)
Q Consensus 353 ~~~~~l~~~---g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~---~~~~~----~--~~~l-~~- 418 (476)
.+.++...+ +...+++..++..++++++.+.|++.++....+..++.+.++.++ ..++. + ++.+ +.
T Consensus 298 ~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~g~~f~wi~~~~~~~~~~~~~~l~~~~gv~v~pg~ 377 (409)
T PRK07590 298 VQRAAEAVYSPEGKAQIKELIDYYMENAKIIREGLESAGFEVYGGVNAPYIWVKTPDGMSSWDFFDKLLQEANVVGTPGS 377 (409)
T ss_pred HHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCceecCCcceEEEEECCCCCCHHHHHHHHHHHCCEEEeChh
Confidence 444444433 223455667777888899999999887543333456666666653 22222 2 2322 21
Q ss_pred -----cCCEEEEEEcCCCCHHHHHHHHHHHHHH
Q 011842 419 -----QGNIAHVVVMPNVTIDKLDDFLNELIEN 446 (476)
Q Consensus 419 -----~~~~lRv~~~~~~T~edid~~~~~l~~~ 446 (476)
..+.+|+++ ..++++++..++.|.++
T Consensus 378 ~f~~~~~~~iRi~~--~~~~~~l~~~l~rl~~~ 408 (409)
T PRK07590 378 GFGPSGEGYFRLSA--FGSRENVLEAMERIKKA 408 (409)
T ss_pred HhCCCCCCEEEEEc--cCCHHHHHHHHHHHHhh
Confidence 135899985 35789999988888653
No 183
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.82 E-value=6.4e-18 Score=169.94 Aligned_cols=269 Identities=11% Similarity=-0.013 Sum_probs=180.2
Q ss_pred HHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccCHH
Q 011842 143 GVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCA 222 (476)
Q Consensus 143 ~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~~ 222 (476)
++++.+++.+|.+++ .+++|+|+++++..++.. .. |+++| +.+++|..+...++..|++++.||++. ..+|.+
T Consensus 44 ~lr~~ia~~~~~~~~--~I~it~Gs~~~l~~~~~~-~~--~~~vv-~~~P~y~~y~~~~~~~G~~v~~vp~~~-~~~~~~ 116 (332)
T PRK06425 44 DIEDQIKIYTQGLKI--KVLIGPGLTHFIYRLLSY-IN--VGNII-IVEPNFNEYKGYAFTHGIRISALPFNL-INNNPE 116 (332)
T ss_pred HHHHHHHHHhCCCcc--eEEECCCHHHHHHHHHHH-hC--CCcEE-EeCCChHHHHHHHHHcCCeEEEEeCCc-ccCcHH
Confidence 455557777888754 499999999999887753 33 66544 458999999999999999999999874 345665
Q ss_pred HHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCcc--c
Q 011842 223 DFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKK--P 297 (476)
Q Consensus 223 ~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~--~ 297 (476)
.+++ .+++ +|++++++|+||.+-+ +++|+++|++|++ ||++|++|+.+.... ..+...... .
T Consensus 117 ~l~~---~~~k---~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~-----~iI~DE~Y~~~~~~~--~~~~~~~~~~~~ 183 (332)
T PRK06425 117 ILNN---YNFD---LIFIVSPDNPLGNLISRDSLLTISEICRKKGA-----LLFIDEAFIDFVPNR--AEEDVLLNRSYG 183 (332)
T ss_pred HHhh---cCCC---EEEEeCCCCCcCCccCHHHHHHHHHHHHHcCC-----EEEEecchhcccccc--chhHHHHhccCC
Confidence 5542 2333 7777899999999866 6777888899999 999999998664321 111111111 1
Q ss_pred ccEEEEcCCCCCC-CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhc-HHHHHHHHHH
Q 011842 298 IGSVSVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKG-FQKEVQKCLR 375 (476)
Q Consensus 298 ~Dsi~~s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g-~~~~~~~~~~ 375 (476)
--++..|+.|.++ +++++|++++++++++.+...... . ..+ .+.+ .++.....+. .++..+...+
T Consensus 184 ~vi~~~SfSK~~~l~GlRiGy~v~~~~li~~l~~~~~~-----~--~~~-----~~~~-~~l~~~~~~~~~~~~~~~~~~ 250 (332)
T PRK06425 184 NVIIGRSLTKILGIPSLRIGYIATDDYNMKISRKITEP-----W--SVC-----DPAI-DFIRSIDLDYVAKHSLDIMEN 250 (332)
T ss_pred CEEEEeecHHhcCCchhhheeeecCHHHHHHHHHcCCC-----C--ccC-----HHHH-HHHHHhhhHHHHHHHHHHHHH
Confidence 1345678889887 899999999998877665432111 0 001 1111 1122222222 3456777888
Q ss_pred HHHHHHHHHHhcCCeEeecCCeeEEEEecCCcHHHhh-----ceee-cc------cCCEEEEEEcCCCCHHHHHHHHHHH
Q 011842 376 NAHYLKDRLLDAGISAMLNELSSTVVFERPQDEEFVR-----RWQL-AC------QGNIAHVVVMPNVTIDKLDDFLNEL 443 (476)
Q Consensus 376 ~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~~~~~~~-----~~~l-~~------~~~~lRv~~~~~~T~edid~~~~~l 443 (476)
.++++.+.|++.|+....++.++.+.+..++..++.+ +..+ +. ..+++|+++. +.++.++|+++|
T Consensus 251 ~r~~l~~~L~~~g~~~~~~~~g~f~~~~~~~~~~~~~~l~~~gi~v~~~~~f~~~~~~~iRis~~---~~~~~~~l~~al 327 (332)
T PRK06425 251 ERSYLINNLEAMGFRAAGDPSANFITFMIPDAHDFYSYLLKNGILVRLLDDYECLGEQYIRIAIR---RRSFNIKLVNAL 327 (332)
T ss_pred HHHHHHHHHHHCCCEECCCCCceEEEEEcCCHHHHHHHHHHCCeEEEECCCCCCCCCCEEEEEeC---CHHHHHHHHHHH
Confidence 8999999999988654445566777777664443332 2232 11 1358999984 789999999999
Q ss_pred HHHH
Q 011842 444 IENR 447 (476)
Q Consensus 444 ~~~~ 447 (476)
+++.
T Consensus 328 ~~~~ 331 (332)
T PRK06425 328 RNFL 331 (332)
T ss_pred HHHh
Confidence 8763
No 184
>PRK05968 hypothetical protein; Provisional
Probab=99.81 E-value=9e-18 Score=172.18 Aligned_cols=267 Identities=16% Similarity=0.149 Sum_probs=186.2
Q ss_pred HHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHH----HHHHHHcCCeEEEEeCCCC
Q 011842 141 EVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSV----FKAARMYRMECVKVDCLIS 216 (476)
Q Consensus 141 e~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~----~~~~~~~G~~v~~v~~~~~ 216 (476)
..++.+.+++++|.+. .+++++|+.|+..++.+... ||+.|+++...|.+. ...++..|++++.++.+
T Consensus 65 ~~~le~~lA~l~g~~~----av~~~sG~~Ai~~al~al~~--~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~-- 136 (389)
T PRK05968 65 VRAFEEMLAKLEGAED----ARGFASGMAAISSTVLSFVE--PGDRIVAVRHVYPDAFRLFETILKRMGVEVDYVDGR-- 136 (389)
T ss_pred HHHHHHHHHHHhCCCc----EEEECCHHHHHHHHHHHHhC--CCCEEEEeCCCchHHHHHHHHHHHHcCceEEEeCCC--
Confidence 4455566888889864 57778889999888876654 999999999988753 35667789999988764
Q ss_pred CccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCcc
Q 011842 217 GEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKK 296 (476)
Q Consensus 217 g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~ 296 (476)
|+++|++++ ++++ +|.+.+++++++.+.|+++|+++|++||+ ++++|++|+.+... .. +. .
T Consensus 137 ---d~~~l~~~i-~~tk---lV~ie~pt~~~~~~~dl~~i~~la~~~gi-----~vivD~a~a~~~~~--~p---~~--~ 197 (389)
T PRK05968 137 ---DEEAVAKAL-PGAK---LLYLESPTSWVFELQDVAALAALAKRHGV-----VTMIDNSWASPVFQ--RP---IT--L 197 (389)
T ss_pred ---CHHHHHHhc-ccCC---EEEEECCCCCCCcHHHHHHHHHHHHHcCC-----EEEEECCCcchhcc--Cc---hh--c
Confidence 899999988 4444 78888999999999999999999999999 99999999765432 11 11 2
Q ss_pred cccEEEEcCCCCCCCCC--CceeEEeehhhhhhhcCC-ccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHH
Q 011842 297 PIGSVSVSGHKFVGCPM--PCGVQITRMEHINVLSSN-VEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKC 373 (476)
Q Consensus 297 ~~Dsi~~s~hK~l~~p~--~~G~l~~~~~~~~~l~~~-~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~ 373 (476)
++|+++.|++|++++|. ..|+++.++++++.+... ..++. .. ...+..|..+. +.+.+..++++.
T Consensus 198 g~Divv~S~tK~l~g~~~~~gG~i~~~~~~~~~l~~~~~~~~g--------~~--~~~~~A~~~l~--~L~tl~~r~~~~ 265 (389)
T PRK05968 198 GVDLVIHSASKYLGGHSDTVAGVVAGSKEHIARINAEAYPYLG--------AK--LSPFEAWLLLR--GLRTLPLRMKAH 265 (389)
T ss_pred CCcEEEeeccccccCCCCeEEEEEEECHHHHHHHHHHHHHhCC--------CC--CChHHHHHHHc--ccCcHHHHHHHH
Confidence 47999999999999764 368888777765544321 11221 11 12355555544 446788899999
Q ss_pred HHHHHHHHHHHHhcCCe-EeecCC------------eeEEEEecCCc---HHHhhceee---------------c-----
Q 011842 374 LRNAHYLKDRLLDAGIS-AMLNEL------------SSTVVFERPQD---EEFVRRWQL---------------A----- 417 (476)
Q Consensus 374 ~~~a~~l~~~L~~~g~~-~~~~~~------------~~iv~f~~~~~---~~~~~~~~l---------------~----- 417 (476)
.++++++.+.|++.+.. .+..|. .++++|...+. ..|.+.+.+ +
T Consensus 266 ~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~~~~~~~f~~~L~~~~~~~s~G~~~slv~p~~~~~ 345 (389)
T PRK05968 266 EASALEIARRLKAHPVVERVCHPALANHPPAGLSGTSGLFSFIFREGIDVRAFADALKLFRLGVSWGGHESLVVPAEVVL 345 (389)
T ss_pred HHHHHHHHHHHHhCCCccEEECCCCCCChHHhCCCCceEEEEEECCHHHHHHHHHhCCccEEecCCCCCCceeeeCcccc
Confidence 99999999999997643 333231 35888887532 233333321 0
Q ss_pred ----------c---cCCEEEEEEcCCCCHHHHHHHHHHHHHH
Q 011842 418 ----------C---QGNIAHVVVMPNVTIDKLDDFLNELIEN 446 (476)
Q Consensus 418 ----------~---~~~~lRv~~~~~~T~edid~~~~~l~~~ 446 (476)
. ..+.+|+++....+++-++.|-.+|.++
T Consensus 346 ~~~~~~~~~~~~gi~~~liR~SvGlE~~~dl~~dl~~al~~~ 387 (389)
T PRK05968 346 QQKAQPNSAARFGVSPRSVRLHVGLEGTEALWADLEQALAAA 387 (389)
T ss_pred cccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHHh
Confidence 0 0257899998776666666665555543
No 185
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.81 E-value=6.7e-18 Score=171.85 Aligned_cols=210 Identities=13% Similarity=0.109 Sum_probs=160.3
Q ss_pred HHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHH----HHcCCeEEEEeCCCCC
Q 011842 142 VGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAA----RMYRMECVKVDCLISG 217 (476)
Q Consensus 142 ~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~----~~~G~~v~~v~~~~~g 217 (476)
..+.+.+++|-|.+. ++++++|+.|+..++.+... +|+.|+++...|.+....+ +..|+++..++..
T Consensus 65 ~~le~~la~LEg~~~----a~~~~SGmaAi~~~~~~ll~--~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~vd~~--- 135 (395)
T PRK08114 65 FSLQEAMCELEGGAG----CALYPCGAAAVANAILAFVE--QGDHVLMTGTAYEPTQDFCSKILSKLGVTTTWFDPL--- 135 (395)
T ss_pred HHHHHHHHHHhCCCe----EEEEhHHHHHHHHHHHHHcC--CCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEECCC---
Confidence 345555777777653 78899999999988887754 8999999999987766544 5569999998754
Q ss_pred ccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhC--CCCCceEEEEecCcccccccccccCCCCCCc
Q 011842 218 EIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESG--FTQDRFYIHCDGALFGLMMPFVKKAPKVSFK 295 (476)
Q Consensus 218 ~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g--~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~ 295 (476)
|.+.++++|+++++ +|.+.+++|++|.+.||++|+++|+++| + +++||++++.++.. +..
T Consensus 136 --d~~~l~~~l~~~Tr---lV~~EtpsNp~~~v~DI~~Ia~ia~~~g~g~-----~lvVDnT~a~p~~~--------~pl 197 (395)
T PRK08114 136 --IGADIAKLIQPNTK---VVFLESPGSITMEVHDVPAIVAAVRSVNPDA-----VIMIDNTWAAGVLF--------KAL 197 (395)
T ss_pred --CHHHHHHhcCCCce---EEEEECCCCCCCEeecHHHHHHHHHHhCCCC-----EEEEECCCcccccc--------CHH
Confidence 78999999987775 8999999999999999999999999985 8 99999999765441 212
Q ss_pred c-cccEEEEcCCCCCCCCC--CceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHHH
Q 011842 296 K-PIGSVSVSGHKFVGCPM--PCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQK 372 (476)
Q Consensus 296 ~-~~Dsi~~s~hK~l~~p~--~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~ 372 (476)
+ ++|++..|.|||++++- ..|+++.+++..+.+... .+ ..|. ...+...|..+ .|.+.+.-++++
T Consensus 198 ~~GaDivv~S~tKyl~Ghsdv~~G~v~~~~~~~~~l~~~-~~-------~~G~--~~~p~~a~l~~--rgl~TL~lR~~~ 265 (395)
T PRK08114 198 DFGIDISIQAGTKYLVGHSDAMIGTAVANARCWEQLREN-SY-------LMGQ--MVDADTAYMTS--RGLRTLGVRLRQ 265 (395)
T ss_pred HcCCcEEEEcCcccccCCCcceeEEEEcCHHHHHHHHHH-HH-------hccC--CCCHHHHHHHH--cCCCcHHHHHHH
Confidence 2 49999999999999884 778777766543333211 11 1122 12356666444 466788899999
Q ss_pred HHHHHHHHHHHHHhcCCe
Q 011842 373 CLRNAHYLKDRLLDAGIS 390 (476)
Q Consensus 373 ~~~~a~~l~~~L~~~g~~ 390 (476)
..++|..+.+.|++.+..
T Consensus 266 ~~~na~~va~~L~~hp~V 283 (395)
T PRK08114 266 HEESSLKVAEWLAEHPEV 283 (395)
T ss_pred HHHHHHHHHHHHHcCCCE
Confidence 999999999999998753
No 186
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.81 E-value=1.5e-17 Score=168.78 Aligned_cols=275 Identities=12% Similarity=0.061 Sum_probs=186.4
Q ss_pred HHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCC-
Q 011842 138 RQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLIS- 216 (476)
Q Consensus 138 ~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~- 216 (476)
.+++++ ++++++++++ ++++|+|+++++..++.+. . + +.|++.++.|..+...++..|++++.++++.+
T Consensus 57 ~~lr~~----ia~~~~~~~~--~i~it~Ga~~~l~~~~~~~-~--~-~~v~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~ 126 (354)
T PRK06358 57 LELRKR----IASFEQLDLE--NVILGNGATELIFNIVKVT-K--P-KKVLILAPTFAEYERALKAFDAEIEYAELTEET 126 (354)
T ss_pred HHHHHH----HHHHhCCChh--hEEECCCHHHHHHHHHHHh-C--C-CcEEEecCChHHHHHHHHHcCCeeEEEeCcccc
Confidence 355555 4555577654 5999999999998887764 2 4 47889999999999999999999999998743
Q ss_pred -CccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCC
Q 011842 217 -GEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKV 292 (476)
Q Consensus 217 -g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~ 292 (476)
+.+| +++.+.+.+++ .++++++++|+||.+-+ +++|+++|++|++ |+++|++|..+..... ..+.+
T Consensus 127 ~~~~d-~~~~~~~~~~~---~~v~~~~P~NPtG~~~~~~~~~~l~~~a~~~~~-----~ii~De~Y~~~~~~~~-~~~~~ 196 (354)
T PRK06358 127 NFAAN-EIVLEEIKEEI---DLVFLCNPNNPTGQLISKEEMKKILDKCEKRNI-----YLIIDEAFMDFLEENE-TISMI 196 (354)
T ss_pred CCCcc-HHHHHhhccCC---CEEEEeCCCCCCCCccCHHHHHHHHHHHHhcCC-----EEEEeCcccccCCCcc-chhHH
Confidence 4688 66666664443 37778899999999965 8888889999999 9999999976654321 11111
Q ss_pred CCcc--cccEEEEcCCCCCC-CCCCceeEEeeh-hhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhc-HH
Q 011842 293 SFKK--PIGSVSVSGHKFVG-CPMPCGVQITRM-EHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKG-FQ 367 (476)
Q Consensus 293 ~~~~--~~Dsi~~s~hK~l~-~p~~~G~l~~~~-~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g-~~ 367 (476)
.... .--++..|+.|.++ .++++||+++++ .+++.+...... .+ ...+.++++...+.... ++
T Consensus 197 ~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~~~~~~~~~~~~~~~---------~~---~~~~~q~~~~~~l~~~~~~~ 264 (354)
T PRK06358 197 NYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSNKNLAEKLLQMREP---------WS---INTFADLAGQTLLDDKEYIK 264 (354)
T ss_pred HhccCCCCEEEEEechhhccCcchhheeeecCCHHHHHHHHHhCCC---------Cc---chHHHHHHHHHHhccHHHHH
Confidence 1111 11245678889887 999999999864 455444321110 11 12344555555553322 46
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecCCcHHHhh-----ceeec-c------cCCEEEEEEcCCCCHHH
Q 011842 368 KEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERPQDEEFVR-----RWQLA-C------QGNIAHVVVMPNVTIDK 435 (476)
Q Consensus 368 ~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~~~~~~~-----~~~l~-~------~~~~lRv~~~~~~T~ed 435 (476)
+.++...++++++.+.|++.+...+.++..+.+.+..++..++.+ +..+. . ..+++|+++ .+.++
T Consensus 265 ~~~~~~~~~r~~l~~~L~~~~~~~~~~~~g~f~~~~~~~~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRls~---~~~~~ 341 (354)
T PRK06358 265 KTIQWIKEEKDFLYNGLSEFKGIKVYKPSVNFIFFKLEKPIDLRKELLKKGILIRSCSNYRGLDENYYRVAV---KSRED 341 (354)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCcEEcCCcceEEEEEcCchHHHHHHHHHCCeEEEECCCCCCCCCCEEEEEe---CCHHH
Confidence 677788888999999998874334445566666666665444432 22221 1 135799987 68899
Q ss_pred HHHHHHHHHHHH
Q 011842 436 LDDFLNELIENR 447 (476)
Q Consensus 436 id~~~~~l~~~~ 447 (476)
.++|+++|+++.
T Consensus 342 ~~~l~~~l~~~~ 353 (354)
T PRK06358 342 NKKLLKALEVIL 353 (354)
T ss_pred HHHHHHHHHHHh
Confidence 999999998764
No 187
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.81 E-value=9.5e-18 Score=172.80 Aligned_cols=293 Identities=13% Similarity=0.010 Sum_probs=187.1
Q ss_pred hhhHHHHHHHHHHHHHHcCCCCCcccE--EEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEe
Q 011842 135 VHSRQFEVGVLDWFARLWELENNEYWG--YITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVD 212 (476)
Q Consensus 135 ~~~~~le~~~~~~la~l~g~~~~~~~g--~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~ 212 (476)
.|..++++++.+|+.+..+...++..+ ++|+|+++|+..++.+.....||+.|++++++|..+..+++.+|++++.+|
T Consensus 69 ~G~~~lR~aia~~~~~~~~~~~~~~~i~v~iT~Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~~~~~~g~~~v~v~ 148 (396)
T PRK09257 69 EGLAAYRQAVQELLFGADSPALAAGRVATVQTPGGTGALRVGADFLKRAFPDAKVWVSDPTWPNHRAIFEAAGLEVKTYP 148 (396)
T ss_pred CCCHHHHHHHHHHhcCCCCcccccCeEEEEecCCccHHHHHHHHHHHHhCCCCeEEECCCCcccHHHHHHHcCCcEEEEe
Confidence 356799999999987654432122234 899999999998876543223999999999999999999999999999999
Q ss_pred C-C-CCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCcccccccccc
Q 011842 213 C-L-ISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVK 287 (476)
Q Consensus 213 ~-~-~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~ 287 (476)
+ + +++.+|++.|++++.....+..+++++++.|+||.+-+ +++|+++|++|++ |+++|++|..+......
T Consensus 149 ~~~~~~~~~d~~~l~~~~~~~~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~-----~ii~De~Y~~l~~~~~~ 223 (396)
T PRK09257 149 YYDAATKGLDFDAMLADLSQAPAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGL-----IPFLDIAYQGFGDGLEE 223 (396)
T ss_pred ccccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCc-----EEEEeccccccccchHH
Confidence 7 3 34789999999998753222346667889999999854 7888999999999 99999999875532111
Q ss_pred -cCCCCCCcc-c-ccEEEEcCCCCCC-CCCCceeEEe--eh-hhh----hhhcCCccccCCCCCcccCCCCChhHHHHHH
Q 011842 288 -KAPKVSFKK-P-IGSVSVSGHKFVG-CPMPCGVQIT--RM-EHI----NVLSSNVEYLASRDATIMGSRNGHAPIFLWY 356 (476)
Q Consensus 288 -~~~~~~~~~-~-~Dsi~~s~hK~l~-~p~~~G~l~~--~~-~~~----~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~ 356 (476)
..+...+.. . --++..|+.|.++ +++++||+++ .+ +.+ ..+....... ..+. ..+.+.+
T Consensus 224 ~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~---~~~~q~~ 293 (396)
T PRK09257 224 DAYGLRAFAAAGLELLVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKATIRTN-------YSNP---PAHGAAI 293 (396)
T ss_pred HHHHHHHHHhcCCcEEEEEEcCCcCccccccceeEEEEeCCHHHHHHHHHHHHHHhhhh-------cCCC---cHHHHHH
Confidence 111111111 1 1256678899888 4999999984 32 322 2221111100 1111 1222333
Q ss_pred HHHHhC--------hhcHHHHHHHHHHHHHHHHHHHHhcCC---eEeecCCeeEEE-EecCCc--HHHhhc--eeecccC
Q 011842 357 TLNRKG--------YKGFQKEVQKCLRNAHYLKDRLLDAGI---SAMLNELSSTVV-FERPQD--EEFVRR--WQLACQG 420 (476)
Q Consensus 357 ~l~~~g--------~~g~~~~~~~~~~~a~~l~~~L~~~g~---~~~~~~~~~iv~-f~~~~~--~~~~~~--~~l~~~~ 420 (476)
+...+. .+.+++..++..++++.+.+.|++.+. ..+..+...... +..+.. ..+..+ ..+...+
T Consensus 294 ~~~~l~~~~~~~~~~~~~~~~r~~~~~rr~~l~~~L~~~~~~~~~~~~~p~gg~~~w~~l~~~~~~~l~~~~~V~~~p~~ 373 (396)
T PRK09257 294 VATILNDPELRAEWEAELEEMRERIKAMRQLLVEALKAKGPSRDFDFIARQRGMFSYSGLTPEQVDRLREEFGVYAVGSG 373 (396)
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccceEEEecCCCHHHHHHHHHcCCEEEcCCC
Confidence 333222 123445667778888999999988752 233334444433 334321 112222 2222222
Q ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHH
Q 011842 421 NIAHVVVMPNVTIDKLDDFLNELIEN 446 (476)
Q Consensus 421 ~~lRv~~~~~~T~edid~~~~~l~~~ 446 (476)
|+++.. .++++|+..++.|+++
T Consensus 374 ---ri~~~~-~~~~~i~~~~~~i~~~ 395 (396)
T PRK09257 374 ---RINVAG-LNESNIDYVAEAIAAV 395 (396)
T ss_pred ---eEEEee-CCHHHHHHHHHHHHhh
Confidence 887743 8899999999998764
No 188
>PLN02509 cystathionine beta-lyase
Probab=99.81 E-value=6.3e-18 Score=175.49 Aligned_cols=212 Identities=14% Similarity=0.142 Sum_probs=156.6
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHH----HHHHHcCCeEEEEeCC
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVF----KAARMYRMECVKVDCL 214 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~----~~~~~~G~~v~~v~~~ 214 (476)
...+++.++++++.|.+. .+++++|+.|+. ++..+.. +||.|+++++.|.+.. ..+...|++++.++..
T Consensus 133 pt~~aLE~~lA~leg~e~----ai~~~SG~aAi~-~il~ll~--~GD~VI~~~~~y~~t~~ll~~~l~~~G~~v~~vd~~ 205 (464)
T PLN02509 133 PTRDALESLLAKLDKADR----AFCFTSGMAALS-AVTHLIK--NGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTT 205 (464)
T ss_pred HHHHHHHHHHHHHhCCCE----EEEeCcHHHHHH-HHHHHhC--CCCEEEEcCCchhhHHHHHHHHHHHCCeEEEEeCCC
Confidence 467788888999987653 677788877654 3344433 9999999999998765 3445679998888754
Q ss_pred CCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCC
Q 011842 215 ISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSF 294 (476)
Q Consensus 215 ~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~ 294 (476)
|+++|++++.++++ +|+++++++++|.+.|+++|+++|++||+ ++++|++|+.++.. . ..
T Consensus 206 -----d~e~l~~ai~~~Tk---lV~lesPsNPtG~i~Dl~~I~~lAk~~g~-----~lIVD~A~a~~~~~--~-----pl 265 (464)
T PLN02509 206 -----NLDEVAAAIGPQTK---LVWLESPTNPRQQISDIRKIAEMAHAQGA-----LVLVDNSIMSPVLS--R-----PL 265 (464)
T ss_pred -----CHHHHHHhCCcCCe---EEEEECCCCCCCCHHHHHHHHHHHHHcCC-----EEEEECCccccccC--C-----hh
Confidence 78999999977665 88899999999999999999999999999 99999999765432 1 11
Q ss_pred cccccEEEEcCCCCCCCCCC--ceeEEeehhh-hhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHH
Q 011842 295 KKPIGSVSVSGHKFVGCPMP--CGVQITRMEH-INVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQ 371 (476)
Q Consensus 295 ~~~~Dsi~~s~hK~l~~p~~--~G~l~~~~~~-~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~ 371 (476)
..++|+++.|++||++++.+ .|+++++++. .+.+.. ..+. .++. ..+...|..++ +.+.+..+++
T Consensus 266 ~~gaDivv~S~tK~l~G~gdv~gG~v~~~~~~l~~~~~~-~~~~-------~g~~--l~p~~A~l~lr--~L~tL~~R~~ 333 (464)
T PLN02509 266 ELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYF-LQNS-------EGSG--LAPFDCWLCLR--GIKTMALRIE 333 (464)
T ss_pred hcCCcEEEecCcccccCCCccceeEEEeccHHHHHHHHH-HHHh-------cCCC--cCHHHHHHHHh--hhhhHHHHHH
Confidence 22489999999999998765 7888876653 222210 0110 1111 23455555554 4467888999
Q ss_pred HHHHHHHHHHHHHHhcCC
Q 011842 372 KCLRNAHYLKDRLLDAGI 389 (476)
Q Consensus 372 ~~~~~a~~l~~~L~~~g~ 389 (476)
+..++++++.+.|++.+.
T Consensus 334 r~~~nA~~la~~L~~~p~ 351 (464)
T PLN02509 334 KQQENARKIAMYLSSHPR 351 (464)
T ss_pred HHHHHHHHHHHHHhcCCC
Confidence 999999999999999864
No 189
>PRK10534 L-threonine aldolase; Provisional
Probab=99.81 E-value=3.7e-18 Score=171.63 Aligned_cols=280 Identities=16% Similarity=0.161 Sum_probs=176.4
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHH--HHHcC-CeEEEEe
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKA--ARMYR-MECVKVD 212 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~--~~~~G-~~v~~v~ 212 (476)
...++|++ +++++|.+. .++++||+++++.++.+... ||+.|+++.+.|.+.... +...+ ++++.++
T Consensus 35 ~~~~L~~~----la~~~g~~~----~~v~~~g~~a~~~~l~~~~~--~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (333)
T PRK10534 35 TVNALQDY----AAELSGKEA----ALFLPTGTQANLVALLSHCE--RGEEYIVGQAAHNYLYEAGGAAVLGSIQPQPID 104 (333)
T ss_pred HHHHHHHH----HHHHhCCCe----EEEeCchHHHHHHHHHHhcC--CCCeeEEechhhhhHhcCCchHHhcCceEEeec
Confidence 34455555 667788864 67999999999998887654 889999988888643322 34454 6888888
Q ss_pred CCCCCccCHHHHHHHHHcCC---CCcEEEEEeeCCCccccccCHH---HHHHHHHHhCCCCCceEEEEecCccccccccc
Q 011842 213 CLISGEIDCADFKAKLLQNK---DKPAIINVNIGTTVKGAVDDLD---LVIQTLEESGFTQDRFYIHCDGALFGLMMPFV 286 (476)
Q Consensus 213 ~~~~g~~D~~~Le~~l~~~~---~~p~~vv~t~gtt~tG~id~l~---~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~ 286 (476)
+++++.+|+++|++++.++. .++.+|+++++. +|.+.|.+ +|+++|++|++ |+++|+||.......
T Consensus 105 ~~~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~--~G~v~~~~~l~~i~~~~~~~~~-----~lvvDEA~~~~~~~~- 176 (333)
T PRK10534 105 AAADGTLPLDKVAAKIKPDDIHFARTRLLSLENTH--NGKVLPREYLKQAWEFTRERNL-----ALHVDGARIFNAVVA- 176 (333)
T ss_pred CCCCCCCCHHHHHHhhcccCcCcccceEEEEecCC--CCeecCHHHHHHHHHHHHHcCC-----eEEeeHHHHHHHHHH-
Confidence 87789999999999986521 022366666544 59987765 45678889999 999999975211000
Q ss_pred ccCCCCCCcccccEEEEcCCCCCCCCCCce-eEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhc
Q 011842 287 KKAPKVSFKKPIGSVSVSGHKFVGCPMPCG-VQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKG 365 (476)
Q Consensus 287 ~~~~~~~~~~~~Dsi~~s~hK~l~~p~~~G-~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g 365 (476)
............|.++++++|.++.+ +| +++.++++++.+.....+. .++-+ ..++.+.+++..+ +.
T Consensus 177 ~~~~~~~~~~~~~~~~~s~SK~~~~~--~G~~~~~~~~~i~~~~~~~~~~-------~~~~~-~~~~~~a~~~~~l--~~ 244 (333)
T PRK10534 177 YGCELKEITQYCDSFTICLSKGLGTP--VGSLLVGNRDYIKRARRWRKMT-------GGGMR-QAGILAAAGLYAL--KH 244 (333)
T ss_pred cCCCHHHHHhcCCEEEEEeEcCCCCc--ccceEEcCHHHHHHHHHHHHHh-------CCchh-hHHHHHHHHHHHH--Hh
Confidence 00000111112466667899988754 67 4666666666553222111 00000 1123333333333 22
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecCC--cHHHhh-----ceeecccCCEEEEEEcCCCCHHHHHH
Q 011842 366 FQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERPQ--DEEFVR-----RWQLACQGNIAHVVVMPNVTIDKLDD 438 (476)
Q Consensus 366 ~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~--~~~~~~-----~~~l~~~~~~lRv~~~~~~T~edid~ 438 (476)
..+.+++..+.++++.+.|++.|+. +.++.+++++++.++ ..++.+ ++.+. .+..+|++.+..+|+|+++.
T Consensus 245 ~~~~~~~~~~~r~~l~~~L~~~g~~-~~~~~~nfv~~~~~~~~~~~~~~~l~~~gi~v~-~~~~~rl~~~~r~t~e~~~~ 322 (333)
T PRK10534 245 NVARLQEDHDNAAWLAEQLREAGAD-VMRQDTNMLFVRVGEEQAAALGEYMRERNVLIN-ASPIVRLVTHLDVSREQLAE 322 (333)
T ss_pred hHHHHHHHHHHHHHHHHHHHhCCCc-cCCCCceEEEEECCchhHHHHHHHHHHcCeeec-CCceEEEEEEeCCCHHHHHH
Confidence 2355556666788999999999875 445578888887763 222222 22232 23467998887889999999
Q ss_pred HHHHHHHHH
Q 011842 439 FLNELIENR 447 (476)
Q Consensus 439 ~~~~l~~~~ 447 (476)
+++.|++..
T Consensus 323 ~~~~l~~~~ 331 (333)
T PRK10534 323 VVAHWRAFL 331 (333)
T ss_pred HHHHHHHHh
Confidence 999998654
No 190
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.81 E-value=6.8e-18 Score=173.11 Aligned_cols=210 Identities=16% Similarity=0.160 Sum_probs=156.5
Q ss_pred HHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchH----HHHHHHHcCCeEEEEeCCCCCc
Q 011842 143 GVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYS----VFKAARMYRMECVKVDCLISGE 218 (476)
Q Consensus 143 ~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S----~~~~~~~~G~~v~~v~~~~~g~ 218 (476)
++.+.++++.|.+. .+++++|+.|+..++.+... ||+.|+++.+.|.+ +...+...|++++.++.+
T Consensus 63 ~le~~lA~l~g~~~----av~~~sG~~Ai~~~l~al~~--~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~~~~vd~~---- 132 (391)
T TIGR01328 63 NLEGRIAFLEGTEA----AVATSSGMGAIAATLLTILK--AGDHLISDECLYGCTFALLEHALTKFGIQVDFINMA---- 132 (391)
T ss_pred HHHHHHHHHhCCCc----EEEECCHHHHHHHHHHHHhC--CCCEEEEecCcchHHHHHHHHHHhcCCeEEEEECCC----
Confidence 44555788888864 78899999999888877654 89999999987753 345566679999998875
Q ss_pred cCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCcccc
Q 011842 219 IDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKPI 298 (476)
Q Consensus 219 ~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~~ 298 (476)
|++++++++.++++ +|++.++++++|.+.|+++|+++|+++|+ ++++|++|+.+... . .....+
T Consensus 133 -d~e~l~~~i~~~tk---lV~le~p~Np~G~v~dl~~I~~la~~~gi-----~livD~a~a~~~~~--~-----~~~~g~ 196 (391)
T TIGR01328 133 -IPEEVKAHIKDNTK---IVYFETPANPTMKLIDMERVCRDAHSQGV-----KVIVDNTFATPMLT--N-----PVALGV 196 (391)
T ss_pred -CHHHHHHhhccCCe---EEEEECCCCCCCcccCHHHHHHHHHHcCC-----EEEEECCCchhccC--C-----chhcCC
Confidence 89999999977665 88888999999999999999999999999 99999999754331 1 112348
Q ss_pred cEEEEcCCCCCCCCCC--ceeEEeehhhhhhhcCC-ccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHHH
Q 011842 299 GSVSVSGHKFVGCPMP--CGVQITRMEHINVLSSN-VEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLR 375 (476)
Q Consensus 299 Dsi~~s~hK~l~~p~~--~G~l~~~~~~~~~l~~~-~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~ 375 (476)
|+++.|++|+++++.. .|+++.++++++.+... ..++ .++. ..++..|.+++ +.+.+..++++..+
T Consensus 197 Divv~S~sK~lgg~g~~~gG~v~~~~~li~~l~~~~~~~~-------~g~~--l~~~~a~l~l~--~L~tl~~r~~~~~~ 265 (391)
T TIGR01328 197 DVVVHSATKYIGGHGDVVAGLICGKAELLQQIRMVGIKDM-------TGSV--ISPFDAWLILR--GLKTLNIRMKRHSE 265 (391)
T ss_pred CEEEccccccccCCCCceEEEEEcCHHHHHHHHHHHHHhC-------CCCC--CCcHHHHHHHh--CcCcHHHHHHHHHH
Confidence 9999999999986543 57777777665544321 1111 1211 22345555554 44677888999999
Q ss_pred HHHHHHHHHHhcCC
Q 011842 376 NAHYLKDRLLDAGI 389 (476)
Q Consensus 376 ~a~~l~~~L~~~g~ 389 (476)
+++++.+.|++.+.
T Consensus 266 na~~la~~L~~~p~ 279 (391)
T TIGR01328 266 NAMKVAEYLKSHPA 279 (391)
T ss_pred HHHHHHHHHHhCCC
Confidence 99999999998764
No 191
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.81 E-value=1.5e-17 Score=169.37 Aligned_cols=276 Identities=13% Similarity=0.021 Sum_probs=187.7
Q ss_pred HHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCC-cEEEecCCCchHHHHHHHHcCCeEEEEeCCC--C-Cc
Q 011842 143 GVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPD-GILYASRESHYSVFKAARMYRMECVKVDCLI--S-GE 218 (476)
Q Consensus 143 ~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~-~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~--~-g~ 218 (476)
++++.+++++|++++ ++++|+|+++++...+.+... ++ +.|+++++.|..+...++..|++++.+|++. + ..
T Consensus 63 ~lr~~ia~~~~~~~~--~I~~t~G~~~~l~~~~~~~~~--~g~~~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~ 138 (364)
T PRK04781 63 GLRSALAALYGCAPE--QLLIGRGSDEAIDLLVRALCV--PGRDAVLVTPPVFGMYAVCARLQNAPLVEVPLVDGADGFH 138 (364)
T ss_pred HHHHHHHHHhCcChH--HEEEeCCHHHHHHHHHHHhcC--CCCCeEEEcCCChHHHHHHHHHcCCEEEEEecCCCccCCC
Confidence 444456666788653 599999999999888877654 67 7899999998888888899999999999842 2 35
Q ss_pred cCHHHHHHHHH-cCCCCcEEEEEeeCCCccccccCHHHHHHHHHH--hCCCCCceEEEEecCcccccccccccCCCCCCc
Q 011842 219 IDCADFKAKLL-QNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEE--SGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFK 295 (476)
Q Consensus 219 ~D~~~Le~~l~-~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~--~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~ 295 (476)
+|++++++.+. +++ .+|++++++|+||.+-+.+++.++++. ++. |+++|++|+.+... ....+..+..
T Consensus 139 ~d~~~l~~~~~~~~~---~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~-----~iI~Deay~~f~~~-~~~~~~~~~~ 209 (364)
T PRK04781 139 ADVPAIVAAALASNA---KLVFLCSPSNPAGSAIALDQIERALQALQGKA-----LVVVDEAYGEFSDV-PSAVGLLARY 209 (364)
T ss_pred cCHHHHHHHHhccCC---eEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCc-----EEEEeCcchhhcCC-cchHHHHhhC
Confidence 78998866553 333 377778899999999999888888875 366 99999999865421 1100111111
Q ss_pred ccccEEEEcCCCCCC-CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhCh---hcHHHHHH
Q 011842 296 KPIGSVSVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGY---KGFQKEVQ 371 (476)
Q Consensus 296 ~~~Dsi~~s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~---~g~~~~~~ 371 (476)
.+ -++..|+.|.++ +++++|+++.++++++.+....... ..+ .+.+.++...+.. ....+.++
T Consensus 210 ~~-vi~~~SfSK~~gl~GlRvGy~v~~~~l~~~l~~~~~~~-------~~~-----~~~~~~a~~~l~~~~~~~~~~~~~ 276 (364)
T PRK04781 210 DN-LAVLRTLSKAHALAAARIGSLIANAELIAVLRRCQAPY-------PVP-----TPCAALAEQALSAPALAVTARRVA 276 (364)
T ss_pred CC-EEEEecChhhcccccceeeeeeCCHHHHHHHHhccCCC-------CCC-----HHHHHHHHHHHhcccHHHHHHHHH
Confidence 12 256688999886 8899999999988876664332111 111 2333333333321 23445566
Q ss_pred HHHHHHHHHHHHHHhc-CCeEeecCCeeEEEEecCCcHHHh-----hceee-cc-----cCCEEEEEEcCCCCHHHHHHH
Q 011842 372 KCLRNAHYLKDRLLDA-GISAMLNELSSTVVFERPQDEEFV-----RRWQL-AC-----QGNIAHVVVMPNVTIDKLDDF 439 (476)
Q Consensus 372 ~~~~~a~~l~~~L~~~-g~~~~~~~~~~iv~f~~~~~~~~~-----~~~~l-~~-----~~~~lRv~~~~~~T~edid~~ 439 (476)
+..++++++.+.|++. ++..+.++.++.+.++.++..++. +++.+ ++ ..+++|+++. +.++.++|
T Consensus 277 ~~~~~r~~l~~~L~~~~~~~~~~p~~g~f~~~~~~~~~~~~~~l~~~gI~v~~~~~~~~~~~~~Ris~~---~~~~~~~l 353 (364)
T PRK04781 277 EVRAERERLHAALAQLPGVRRVYPSQGNFLLVRFDDAEAAFQALLAAGVVVRDQRAAPRLSDALRITLG---TPEQNDRV 353 (364)
T ss_pred HHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEcCCHHHHHHHHHHCCeEEeeCCCCCCCCCeEEEeCC---CHHHHHHH
Confidence 6778889999999887 443355666777777766543332 23333 21 1468999885 79999999
Q ss_pred HHHHHHHH
Q 011842 440 LNELIENR 447 (476)
Q Consensus 440 ~~~l~~~~ 447 (476)
+++|+++.
T Consensus 354 ~~al~~~~ 361 (364)
T PRK04781 354 LAALQRTQ 361 (364)
T ss_pred HHHHHHHH
Confidence 99998764
No 192
>PRK05839 hypothetical protein; Provisional
Probab=99.81 E-value=3.1e-17 Score=167.69 Aligned_cols=283 Identities=12% Similarity=-0.023 Sum_probs=185.1
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCC
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLI 215 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~ 215 (476)
+..++++++++++++..|.+.++.++++|+|+++++...+.+.....+++.|+++.++|..+...++..|++++.++.+.
T Consensus 61 G~~~lr~aia~~l~~~~g~~~~~~~I~it~G~~~al~~~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~ 140 (374)
T PRK05839 61 GEESLREAQRGFFKRRFKIELKENELIPTFGTREVLFNFPQFVLFDKQNPTIAYPNPFYQIYEGAAIASRAKVLLMPLTK 140 (374)
T ss_pred CCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHHhcCCCCCEEEECCCCchhhHHHHHhcCCEEEEeeccc
Confidence 45699999999999988865444569999999999887766654212789999999999999999999999999999975
Q ss_pred C--CccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCcccccccccccCC
Q 011842 216 S--GEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAP 290 (476)
Q Consensus 216 ~--g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~ 290 (476)
+ +.+|++.. .+ +++ .+|+++++.|+||.+-+ +++|+++|++||+ ||++|++|+.+... ....+
T Consensus 141 ~~~~~~d~~~~--~~-~~~---k~v~i~nP~NPTG~~~s~~~l~~i~~~~~~~~~-----~ii~DE~Y~~~~~~-~~~~s 208 (374)
T PRK05839 141 ENDFTPSLNEK--EL-QEV---DLVILNSPNNPTGRTLSLEELIEWVKLALKHDF-----ILINDECYSEIYEN-TPPPS 208 (374)
T ss_pred ccCCcCCcchh--hh-ccc---cEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCC-----EEEeccchhhcccC-CCCCC
Confidence 4 34554332 23 233 37777899999999854 7788888999999 99999999864321 11111
Q ss_pred CCCC-----c-c-cccEEEEcCCCC-CCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHh-
Q 011842 291 KVSF-----K-K-PIGSVSVSGHKF-VGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRK- 361 (476)
Q Consensus 291 ~~~~-----~-~-~~Dsi~~s~hK~-l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~- 361 (476)
.... . . .--++..|+.|. +.+++++|+++.++++++.+.....++. .+-+ .+.+.++...+
T Consensus 209 ~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~ii~~~~~~~~~~~~~~~~~-------~~~~---~~~q~~~~~~l~ 278 (374)
T PRK05839 209 LLEASILVGNESFKNVLVINSISKRSSAPGLRSGFIAGDASILKKYKAYRTYLG-------CASP---LPLQKAAAVAWL 278 (374)
T ss_pred HhhhhcccCccccCcEEEEeccccccCCccceeEEEecCHHHHHHHHHHHhhcC-------CCCC---hHHHHHHHHHhc
Confidence 1110 0 1 112556778895 6889999999998777665533222221 1111 12233332222
Q ss_pred ChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecCCcHHHhh------ceeecc---------cCCEEEEE
Q 011842 362 GYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERPQDEEFVR------RWQLAC---------QGNIAHVV 426 (476)
Q Consensus 362 g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~~~~~~~------~~~l~~---------~~~~lRv~ 426 (476)
..+.+++..++..++++++.+.| +.. .++.++.+.++.+++.++.+ +..+.. ..+++|++
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~l---~~~--~p~gg~fi~~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~~~iRis 353 (374)
T PRK05839 279 DDEHAEFFRNIYAKNLKLAREIL---GIT--IPPATFYVWLPVDNDEEFTKKLYQNEGIKVLPGSFLGRNGIGKGYVRIA 353 (374)
T ss_pred cchHHHHHHHHHHHHHHHHHHhc---CCC--CCCeeEEEEEeCCChHHHHHHHHHHCCEEEeCchhhCCCCCCCCeEEEE
Confidence 22334556666666766666654 332 34556666666665443322 222211 13789999
Q ss_pred EcCCCCHHHHHHHHHHHHHHH
Q 011842 427 VMPNVTIDKLDDFLNELIENR 447 (476)
Q Consensus 427 ~~~~~T~edid~~~~~l~~~~ 447 (476)
+. .+.+++...++.|.++.
T Consensus 354 ~~--~~~~~~~~~l~~l~~~l 372 (374)
T PRK05839 354 LV--YDTPKLEKALEIIKTYL 372 (374)
T ss_pred ec--CCHHHHHHHHHHHHHHh
Confidence 85 36899999988887764
No 193
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.81 E-value=1.3e-17 Score=171.67 Aligned_cols=213 Identities=17% Similarity=0.178 Sum_probs=158.3
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHH----HHHHHcCCeEEEE
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVF----KAARMYRMECVKV 211 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~----~~~~~~G~~v~~v 211 (476)
...+||++ +++++|.+. .++++||+.|+..++.+... ||+.|+++.+.|.+.. ..++..|++++.+
T Consensus 65 ~~~~Le~~----iA~~~g~~~----~l~~~sG~~Ai~~al~~ll~--~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~v 134 (400)
T PRK06234 65 TSTEVENK----LALLEGGEA----AVVAASGMGAISSSLWSALK--AGDHVVASDTLYGCTFALLNHGLTRYGVEVTFV 134 (400)
T ss_pred cHHHHHHH----HHHHhCCCc----EEEEcCHHHHHHHHHHHHhC--CCCEEEEecCccchHHHHHHHHHhhCCeEEEEE
Confidence 34455555 666677642 78999999999888877665 9999999998886543 4457789999999
Q ss_pred eCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHh--CCCCCceEEEEecCcccccccccccC
Q 011842 212 DCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEES--GFTQDRFYIHCDGALFGLMMPFVKKA 289 (476)
Q Consensus 212 ~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~--g~~~~~~~lhvD~a~~g~~~~~~~~~ 289 (476)
+.+ |++++++++.++++ +|++++++|++|.+.|+++|+++|+++ |+ ++++|++|+.+... .
T Consensus 135 d~~-----d~e~l~~~i~~~tk---lI~iesP~NPtG~v~dl~~I~~la~~~~~~i-----~livDea~~~~~~~--~-- 197 (400)
T PRK06234 135 DTS-----NLEEVRNALKANTK---VVYLETPANPTLKVTDIKAISNIAHENNKEC-----LVFVDNTFCTPYIQ--R-- 197 (400)
T ss_pred CCC-----CHHHHHHHhccCCe---EEEEECCCCCCCCcCCHHHHHHHHHhcCCCC-----EEEEECCCCchhcC--C--
Confidence 865 89999999987665 888899999999999999999999997 88 99999999865432 1
Q ss_pred CCCCCcccccEEEEcCCCCCCCCC-C-ceeEEeehhhhhhhcCC-ccccCCCCCcccCCCCChhHHHHHHHHHHhChhcH
Q 011842 290 PKVSFKKPIGSVSVSGHKFVGCPM-P-CGVQITRMEHINVLSSN-VEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGF 366 (476)
Q Consensus 290 ~~~~~~~~~Dsi~~s~hK~l~~p~-~-~G~l~~~~~~~~~l~~~-~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~ 366 (476)
.+ ...+|+++.|++|+++++. . .|++++++++++.+... ..+. .+.. ..++..|..++ +.+.+
T Consensus 198 -~l--~~g~Divv~S~sK~l~g~g~~~gG~v~~~~~~~~~l~~~~~~~~-------~g~~--l~p~~a~l~~~--~l~tl 263 (400)
T PRK06234 198 -PL--QLGADVVVHSATKYLNGHGDVIAGFVVGKEEFINQVKLFGIKDM-------TGSV--IGPFEAFLIIR--GMKTL 263 (400)
T ss_pred -ch--hhCCcEEEeeccccccCCCCceeEEEEecHHHHHHHHHHHHHHh-------cCCC--CCHHHHHHHHh--ccCcH
Confidence 01 1248999999999998543 3 58888888776554311 1111 1111 23455555544 45677
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCC
Q 011842 367 QKEVQKCLRNAHYLKDRLLDAGI 389 (476)
Q Consensus 367 ~~~~~~~~~~a~~l~~~L~~~g~ 389 (476)
..++++..++++++.+.|++.+.
T Consensus 264 ~~r~~~~~~na~~~a~~L~~~~~ 286 (400)
T PRK06234 264 QIRMEKHCKNAMKVAKFLESHPA 286 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCC
Confidence 88999999999999999998764
No 194
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.81 E-value=9.5e-18 Score=172.25 Aligned_cols=214 Identities=14% Similarity=0.101 Sum_probs=158.4
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHH----HHHHHcCCeEEEEeCC
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVF----KAARMYRMECVKVDCL 214 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~----~~~~~~G~~v~~v~~~ 214 (476)
...+++.+.++++.|.+. .+++++|+.|+..++.+... ||+.|+++.+.|.+.. ..++..|++++.++.
T Consensus 64 p~~~~le~~lA~l~g~~~----~i~~ssG~~Ai~~~l~all~--~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~- 136 (398)
T PRK08249 64 PTVQAFEEKVRILEGAEA----ATAFSTGMAAISNTLYTFLK--PGDRVVSIKDTYGGTNKIFTEFLPRMGVDVTLCET- 136 (398)
T ss_pred hHHHHHHHHHHHHhCCCe----EEEeCChHHHHHHHHHHhcC--CCCEEEEcCCchHHHHHHHHHHHhhCCeEEEEcCC-
Confidence 444566677888888753 68888899999988877655 8999999999998653 345567888887764
Q ss_pred CCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCC
Q 011842 215 ISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSF 294 (476)
Q Consensus 215 ~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~ 294 (476)
.|++.++++|+++++ +|.++++++++|.+.|+++|+++|++||+ ++++|++|+.++.. .+ +
T Consensus 137 ----~d~e~l~~~i~~~tk---lV~ie~p~NPtg~v~dl~~I~~la~~~gi-----~livD~t~a~~~~~----~~-l-- 197 (398)
T PRK08249 137 ----GDHEQIEAEIAKGCD---LLYLETPTNPTLKIVDIERLAAAAKKVGA-----LVVVDNTFATPINQ----NP-L-- 197 (398)
T ss_pred ----CCHHHHHHhcCCCCe---EEEEECCCCCCCccCCHHHHHHHHHHcCC-----EEEEECCcCccccC----Cc-h--
Confidence 489999999987665 88888999999999999999999999999 99999999854321 11 1
Q ss_pred cccccEEEEcCCCCCCCCC-C-ceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHHH
Q 011842 295 KKPIGSVSVSGHKFVGCPM-P-CGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQK 372 (476)
Q Consensus 295 ~~~~Dsi~~s~hK~l~~p~-~-~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~ 372 (476)
...+|+++.|++|+++++. . .|+++.++++.+.+.....+ .++. ..++.+|..++ +.+.+..++++
T Consensus 198 ~~~~Divv~S~sK~l~g~~~~~gG~vv~~~~l~~~l~~~~~~--------~g~~--~s~~~a~l~l~--~l~tL~~R~~~ 265 (398)
T PRK08249 198 ALGADLVIHSATKFLSGHADALGGVVCGSKELMEQVYHYREI--------NGAT--MDPMSAYLILR--GMKTLKLRVRQ 265 (398)
T ss_pred hhCCCEEeccCceecCCCCCceEEEEECCHHHHHHHHHHHHh--------cCCC--CCHHHHHHHHh--CcchHHHHHHH
Confidence 1248999999999998643 2 46666665555544221111 1211 23455665555 45677888899
Q ss_pred HHHHHHHHHHHHHhcCCe
Q 011842 373 CLRNAHYLKDRLLDAGIS 390 (476)
Q Consensus 373 ~~~~a~~l~~~L~~~g~~ 390 (476)
..++++.+.+.|++.+..
T Consensus 266 ~~~na~~la~~L~~~p~v 283 (398)
T PRK08249 266 QQESAMALAKYLQTHPKV 283 (398)
T ss_pred HHHHHHHHHHHHHcCCCe
Confidence 999999999999987654
No 195
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.81 E-value=4.1e-17 Score=158.87 Aligned_cols=314 Identities=13% Similarity=0.147 Sum_probs=219.5
Q ss_pred HHHHHHHHHHHHhcccccccCCCCcCCcchHHHHHHHHHhhCCCCCCcccCccchhhHHHHHHHHHHHHHHcCCCCCccc
Q 011842 81 MAGVLARYRKTLMERTKHHLGYPYNLDFDYGALAQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELENNEYW 160 (476)
Q Consensus 81 ~~~il~~~~~~~~~~~~~~~g~p~~~~~~~~~l~~~l~~~~n~~g~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~ 160 (476)
+..|++.+++.++.+.. |||.. ..++-+++.+|.++-.+++..+.+
T Consensus 40 pp~i~~Al~~rvdhGvf---GY~~~-------------------------------~~~~~~ai~~w~~~r~~~~i~~e~ 85 (388)
T COG1168 40 PPEIIEALRERVDHGVF---GYPYG-------------------------------SDELYAAIAHWFKQRHQWEIKPEW 85 (388)
T ss_pred CHHHHHHHHHHHhcCCC---CCCCC-------------------------------CHHHHHHHHHHHHHhcCCCCCcce
Confidence 56788888888877765 66621 236888999999999999977788
Q ss_pred EEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCC-CC--CccCHHHHHHHHHcCCCCcEE
Q 011842 161 GYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCL-IS--GEIDCADFKAKLLQNKDKPAI 237 (476)
Q Consensus 161 g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~-~~--g~~D~~~Le~~l~~~~~~p~~ 237 (476)
.++++|...++..++++... |||.|++..+.|+.+.++....|=++...|+- .+ ..||.++||+++.+.. +.+
T Consensus 86 i~~~p~VVpgi~~~I~~~T~--~gd~Vvi~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~--vkl 161 (388)
T COG1168 86 IVFVPGVVPGISLAIRALTK--PGDGVVIQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDER--VKL 161 (388)
T ss_pred EEEcCcchHhHHHHHHHhCc--CCCeeEecCCCchHHHHHHhhcCcEEEeccccccCCcEEecHHHHHHHHhcCC--ccE
Confidence 99999999999999998877 99999999999999999999999999999885 34 4579999999997653 227
Q ss_pred EEEeeCCCccccc---cCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCccc-cc-EEE-EcCCCCC-C
Q 011842 238 INVNIGTTVKGAV---DDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKP-IG-SVS-VSGHKFV-G 310 (476)
Q Consensus 238 vv~t~gtt~tG~i---d~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~-~D-si~-~s~hK~l-~ 310 (476)
++..+|.|++|.+ +.|.+|.++|++||+ .+++|+.|+-.++...+|.+.....+. +| +++ .++.|.+ -
T Consensus 162 ~iLCnPHNP~Grvwt~eeL~~i~elc~kh~v-----~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNl 236 (388)
T COG1168 162 FILCNPHNPTGRVWTKEELRKIAELCLRHGV-----RVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNL 236 (388)
T ss_pred EEEeCCCCCCCccccHHHHHHHHHHHHHcCC-----EEEeecccccccccCCCccchhhcChhhhcceEEEeeccccccc
Confidence 7778899999998 679999999999999 999999999888766566554444443 33 444 3446644 5
Q ss_pred CCCCceeEEeehhhh-hhhcCCccccCCCCCcccCCCCChhHHHHHHHHH--HhChhcHHHHHHHHHHHHHHHHHHHHhc
Q 011842 311 CPMPCGVQITRMEHI-NVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLN--RKGYKGFQKEVQKCLRNAHYLKDRLLDA 387 (476)
Q Consensus 311 ~p~~~G~l~~~~~~~-~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~--~~g~~g~~~~~~~~~~~a~~l~~~L~~~ 387 (476)
++..|+.++..++.. ..+........ .+. ...++.-+... ..|..-+.+..+.+..|.+++.+.|.+.
T Consensus 237 aGL~~a~~Ii~n~~lr~~~~~~l~~~~------~~~---~n~lg~~A~~aAY~~G~~WLd~L~~yl~~N~~~~~~~l~~~ 307 (388)
T COG1168 237 AGLKCAYIIISNRELRAKFLKRLKRNG------LHG---PSALGIIATEAAYNQGEPWLDELLEYLKDNRDYVADFLNKH 307 (388)
T ss_pred hhhhheeEEecCHHHHHHHHHHHHHhc------CCC---CchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 678899988887632 22221111111 111 22333333322 3366668889999999999999999985
Q ss_pred -CCeEeecC-CeeEEEEec---CCcHHHhhce-----eec--c-------cCCEEEEEEcCCCCHHHHHHHHHHHHHHHH
Q 011842 388 -GISAMLNE-LSSTVVFER---PQDEEFVRRW-----QLA--C-------QGNIAHVVVMPNVTIDKLDDFLNELIENRS 448 (476)
Q Consensus 388 -g~~~~~~~-~~~iv~f~~---~~~~~~~~~~-----~l~--~-------~~~~lRv~~~~~~T~edid~~~~~l~~~~~ 448 (476)
+...+..| ++-...+.. +-+++..++| .+. . +.+.+| ++..++++-++..++.|+...+
T Consensus 308 ~P~v~v~~p~gTYL~WLD~r~l~l~d~~l~~~ll~~akVal~~G~~FG~~g~gf~R--lN~acpr~~L~eal~ri~~al~ 385 (388)
T COG1168 308 LPGVKVTEPQGTYLAWLDCRELGLDDSELAEFLLEEAKVALSPGSTFGEEGSGFVR--LNFACPRAILEEALERLKRALK 385 (388)
T ss_pred CCCcEEecCCCceeeeeeccccCCChHHHHHHHHHhhcEeccCCCccCcCCCceEE--EecCCCHHHHHHHHHHHHHHHh
Confidence 44444444 444444332 1222222222 221 1 125566 4556777777777777765544
No 196
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.81 E-value=2.1e-17 Score=169.98 Aligned_cols=213 Identities=16% Similarity=0.126 Sum_probs=157.0
Q ss_pred HHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchH----HHHHHHHcCCeEEEEeCCC
Q 011842 140 FEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYS----VFKAARMYRMECVKVDCLI 215 (476)
Q Consensus 140 le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S----~~~~~~~~G~~v~~v~~~~ 215 (476)
..+++.+.++++.|.+. .+++++|+.|+.+++.+... ||+.|+++.+.|.. +...++..|++++.++..
T Consensus 61 ~~~~Le~~lA~l~g~~~----~v~~~sG~~Ai~~~l~all~--pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v~~~- 133 (405)
T PRK08776 61 TRDLLGEALAELEGGAG----GVITATGMGAINLVLNALLQ--PGDTLVVPHDAYGGSWRLFNALAKKGHFALITADLT- 133 (405)
T ss_pred HHHHHHHHHHHHhCCCc----eEEEcCHHHHHHHHHHHHhC--CCCEEEEccCCchHHHHHHHHHHHhcCcEEEEECCC-
Confidence 34456677888888743 67888889998888777754 99999999999876 344455568888888753
Q ss_pred CCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCc
Q 011842 216 SGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFK 295 (476)
Q Consensus 216 ~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~ 295 (476)
|+++|++++.++++ +|++++++|++|.+.|+++|+++|+++|+ ++++|++|...... .+ +.
T Consensus 134 ----d~~~l~~~i~~~tk---lV~l~~P~NPtG~v~dl~~I~~la~~~gi-----~vIvD~a~a~~~~~----~p-l~-- 194 (405)
T PRK08776 134 ----DPRSLADALAQSPK---LVLIETPSNPLLRITDLRFVIEAAHKVGA-----LTVVDNTFLSPALQ----KP-LE-- 194 (405)
T ss_pred ----CHHHHHHhcCcCCe---EEEEECCCCCCCccCCHHHHHHHHHHcCC-----EEEEECCCcccccC----Cc-cc--
Confidence 89999999876654 88888999999999999999999999999 99999999753321 11 22
Q ss_pred ccccEEEEcCCCCCCCCCC--ceeEEeehh-hhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHHH
Q 011842 296 KPIGSVSVSGHKFVGCPMP--CGVQITRME-HINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQK 372 (476)
Q Consensus 296 ~~~Dsi~~s~hK~l~~p~~--~G~l~~~~~-~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~ 372 (476)
.++|+++.|+||+++++.+ .|+++.+++ +.+.+.....+. +.. ..++..|..++ +.+.++.++++
T Consensus 195 ~gaDivv~S~tK~l~g~~~~~~G~vv~~~~~l~~~l~~~~~~~--------g~~--~s~~~a~l~~~--gl~tl~~r~~~ 262 (405)
T PRK08776 195 FGADLVLHSTTKYINGHSDVVGGAVVARDAELHQQLVWWANAL--------GLT--GSPFDAFLTLR--GLRTLDARLRV 262 (405)
T ss_pred ccCCEEEecCceeecCCCCceEEEEEeCCHHHHHHHHHHHHhc--------CCC--CCHHHHHHHHh--hhCcHHHHHHH
Confidence 2489999999999987654 677777654 444332111111 111 13566666553 45678889999
Q ss_pred HHHHHHHHHHHHHhcCCe
Q 011842 373 CLRNAHYLKDRLLDAGIS 390 (476)
Q Consensus 373 ~~~~a~~l~~~L~~~g~~ 390 (476)
..+++..+.+.|++.+..
T Consensus 263 ~~~na~~la~~L~~~p~v 280 (405)
T PRK08776 263 HQENADAIAALLDGHAAV 280 (405)
T ss_pred HHHHHHHHHHHHHcCCCe
Confidence 999999999999998643
No 197
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.81 E-value=1.6e-17 Score=169.55 Aligned_cols=208 Identities=11% Similarity=0.085 Sum_probs=153.5
Q ss_pred HHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHH----HHHcCCeEEEEeCCCCCcc
Q 011842 144 VLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKA----ARMYRMECVKVDCLISGEI 219 (476)
Q Consensus 144 ~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~----~~~~G~~v~~v~~~~~g~~ 219 (476)
+++.++++.|.. .+++|+||++|+..++.+..+ |||+|+++++.|.+.... ....|+++..++.+
T Consensus 66 Le~~iA~le~~~----~~~~~~sG~~Ai~~~l~all~--~GD~Vvv~~~~Y~~t~~l~~~~l~~~Gi~v~~v~~~----- 134 (394)
T PRK09028 66 FQAAIVELEGGA----GTALYPSGAAAISNALLSFLK--AGDHLLMVDSCYEPTRDLCDKILKGFGIETTYYDPM----- 134 (394)
T ss_pred HHHHHHHHhCCC----cEEEECCHHHHHHHHHHHHhC--CCCEEEEECCCcHHHHHHHHHhhhhcceEEEEECCC-----
Confidence 334466666553 288999999999998887765 999999999998776543 34568888877654
Q ss_pred CHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCccccc
Q 011842 220 DCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKPIG 299 (476)
Q Consensus 220 D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~~D 299 (476)
|.+.|++++.++++ +|++++++|++|.+.|+++|+++|++||+ +++||++|+.++.. .+ + .-++|
T Consensus 135 ~~e~l~~~l~~~Tk---lV~lespsNPtg~v~dl~~I~~la~~~g~-----~lvvD~t~a~p~~~----~P-l--~~GaD 199 (394)
T PRK09028 135 IGEGIRELIRPNTK---VLFLESPGSITMEVQDVPTLSRIAHEHDI-----VVMLDNTWASPINS----RP-F--EMGVD 199 (394)
T ss_pred CHHHHHHhcCcCce---EEEEECCCCCCCcHHHHHHHHHHHHHcCC-----EEEEECCccccccC----Cc-c--ccCce
Confidence 56789998877665 89999999999999999999999999999 99999999865321 10 1 22499
Q ss_pred EEEEcCCCCCCCCCC--ceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHHHHH
Q 011842 300 SVSVSGHKFVGCPMP--CGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNA 377 (476)
Q Consensus 300 si~~s~hK~l~~p~~--~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a 377 (476)
++..|.|||++++.. .|+++.++++.+.+.....++ |.- ..+...|..++ |.+.+.-++++..+++
T Consensus 200 ivv~S~tK~l~Gh~d~~~G~~~~~~~~~~~l~~~~~~~--------G~~--~~p~~a~l~~r--gl~TL~lR~~~~~~na 267 (394)
T PRK09028 200 ISIQAATKYIVGHSDVMLGTATANEKHWDQLREHSYLM--------GQC--TSPDDVYLAMR--GLRTLGVRLAQHEKNA 267 (394)
T ss_pred EEEEeCCeEecCCCCEEEEEEECCHHHHHHHHHHHHhc--------CCC--CCHHHHHHHHc--ccCcHHHHHHHHHHHH
Confidence 999999999987632 455555554443332111121 211 23566665544 5677899999999999
Q ss_pred HHHHHHHHhcCC
Q 011842 378 HYLKDRLLDAGI 389 (476)
Q Consensus 378 ~~l~~~L~~~g~ 389 (476)
..+.+.|++.+.
T Consensus 268 ~~la~~L~~~p~ 279 (394)
T PRK09028 268 LKVANWLATRPE 279 (394)
T ss_pred HHHHHHHhcCCC
Confidence 999999999874
No 198
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.81 E-value=1.2e-17 Score=172.97 Aligned_cols=220 Identities=15% Similarity=0.093 Sum_probs=155.3
Q ss_pred HHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHH----HHcCCeEEEEeCCC
Q 011842 140 FEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAA----RMYRMECVKVDCLI 215 (476)
Q Consensus 140 le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~----~~~G~~v~~v~~~~ 215 (476)
...++++.++++.|.+. .++|++||.|+.+++.+... +|++|+++...|.+..... ...|++++.++.+
T Consensus 65 ~~~~le~~lA~l~g~~~----av~~sSGt~Al~~al~~ll~--~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~- 137 (433)
T PRK08134 65 TVAVLEERVAALEGGVG----AIATASGQAALHLAIATLMG--AGSHIVASSALYGGSHNLLHYTLRRFGIETTFVKPG- 137 (433)
T ss_pred HHHHHHHHHHHHhCCCc----EEEeCCHHHHHHHHHHHHhC--CCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEECCC-
Confidence 34455566888888764 79999999999998877644 8999999999997654443 4479999999875
Q ss_pred CCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCc
Q 011842 216 SGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFK 295 (476)
Q Consensus 216 ~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~ 295 (476)
|+++|+++|+++++ +|++.++++++|.+.|+++|+++|++||+ ++++|++|+.+... ....
T Consensus 138 ----d~~~l~~~i~~~Tk---lV~~e~~~np~g~v~Di~~I~~la~~~gi-----~livD~t~a~~~~~-------~pl~ 198 (433)
T PRK08134 138 ----DIDGWRAAIRPNTR---LLFGETLGNPGLEVLDIPTVAAIAHEAGV-----PLLVDSTFTTPYLL-------RPFE 198 (433)
T ss_pred ----CHHHHHHhcCCCCe---EEEEECCCcccCcccCHHHHHHHHHHcCC-----EEEEECCCcccccC-------Cchh
Confidence 89999999988776 78888999999999999999999999999 99999999765543 1122
Q ss_pred ccccEEEEcCCCCCCCCCC-ceeEEeeh-hh--h-----hhhcCC-ccc--c-CCCC--------------CcccCCCCC
Q 011842 296 KPIGSVSVSGHKFVGCPMP-CGVQITRM-EH--I-----NVLSSN-VEY--L-ASRD--------------ATIMGSRNG 348 (476)
Q Consensus 296 ~~~Dsi~~s~hK~l~~p~~-~G~l~~~~-~~--~-----~~l~~~-~~y--l-~~~~--------------~~~~~sr~~ 348 (476)
.++|+++.|.|||++++.. +|.+++.. .. . ..+... ..+ + ...+ ....|..
T Consensus 199 ~GaD~vv~S~tK~l~g~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~~-- 276 (433)
T PRK08134 199 HGADLVYHSATKFLGGHGTAIGGVLVDGGRFDWEASGKFPELTEPYAGFHGMVFAEESTVAAFLLRARREGLRDFGAC-- 276 (433)
T ss_pred cCCCEEEeccccccCCCCCceEEEEEecCccccccccccccccCCcccccccchhhccchhHHHHHHHHHHHHhcCCC--
Confidence 3499999999999985432 45555432 11 0 000000 000 0 0000 0000111
Q ss_pred hhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCC
Q 011842 349 HAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGI 389 (476)
Q Consensus 349 ~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~ 389 (476)
..+...|.. ..|.+.+..++++..+++..+.+.|++.+.
T Consensus 277 ls~~~A~l~--~~gL~tl~~R~~~~~~nA~~la~~L~~~p~ 315 (433)
T PRK08134 277 LSPMNAWQL--LQGIETLPLRMERHVANTRKVVAFLASHPA 315 (433)
T ss_pred CCHHHHHHH--hcCCCcHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 123344433 346678999999999999999999998764
No 199
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.81 E-value=4.4e-17 Score=181.39 Aligned_cols=334 Identities=15% Similarity=0.105 Sum_probs=214.3
Q ss_pred CCcHHHHHHHHHHHHhccc--ccccCCCCcCCcchHHH-HHHHHHhhCCCCCCcccCccc----hhhHHHHHHHHHHHHH
Q 011842 78 EAYMAGVLARYRKTLMERT--KHHLGYPYNLDFDYGAL-AQLQHFSINNLGDPFIESNYG----VHSRQFEVGVLDWFAR 150 (476)
Q Consensus 78 ~~~~~~il~~~~~~~~~~~--~~~~g~p~~~~~~~~~l-~~~l~~~~n~~g~~~~~~~~~----~~~~~le~~~~~~la~ 150 (476)
+.+-.++++++++....+. +.++|.-.+..+.++.+ ..++. +.+.-..++|+. .+.-+..-+...++++
T Consensus 57 ~~sE~e~~~~~~~la~~N~~~~~~ig~G~y~~~~P~vi~~~i~~----~~~~~t~ytPyQ~EisQG~Leal~~~Qt~la~ 132 (954)
T PRK05367 57 ALSEAEALAELRAIASKNKVFRSYIGQGYYGTHTPPVILRNILE----NPAWYTAYTPYQPEISQGRLEALLNFQTMVAD 132 (954)
T ss_pred CCCHHHHHHHHHHHHhcCCCCCcccCCCCCCCcCcHHHHHHHHh----CcchhhccCCCChHHHHHHHHHHHHHHHHHHH
Confidence 3456788999988866653 24566333333444544 33333 322111122332 2334555667799999
Q ss_pred HcCCCCCcccEEEcCCchhHHHHHHHHHHhhCC--CcEEEecCCCchHHHHH----HHHcCCeEEEEeCCCCCccCHHHH
Q 011842 151 LWELENNEYWGYITNCGTEGNLHGILVGREVFP--DGILYASRESHYSVFKA----ARMYRMECVKVDCLISGEIDCADF 224 (476)
Q Consensus 151 l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p--~~~Vl~s~~~H~S~~~~----~~~~G~~v~~v~~~~~g~~D~~~L 224 (476)
|.|++..+ ..++.++|.+.-..+++.+ ..+ +++|++++..|++.... ++..|++++.++.+.+ ++
T Consensus 133 LtG~~~an--aSl~d~aTAa~ea~~~a~~-~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~~~~~d--~~---- 203 (954)
T PRK05367 133 LTGLEIAN--ASLLDEATAAAEAMALAKR-VSKSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVGDAAKA--LD---- 203 (954)
T ss_pred HHCCChhh--ccccccHHHHHHHHHHhhh-hccCCCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEecCccC--CC----
Confidence 99998643 7788888887664444433 334 38999999999987643 4667999999997542 11
Q ss_pred HHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCcccccEEEEc
Q 011842 225 KAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKPIGSVSVS 304 (476)
Q Consensus 225 e~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~~Dsi~~s 304 (476)
.. ..+.+ +..-++.+|.+.|+++|+++|+++|+ +++||+.+.+...... ...-++|+++.+
T Consensus 204 ------~~-~~~~v-lvq~p~~~G~i~d~~~i~~~ah~~Ga-----l~~vda~~~Al~~l~~------pge~GaDi~vgs 264 (954)
T PRK05367 204 ------HD-DVFGV-LLQYPGTSGEVRDYTALIAAAHARGA-----LVAVAADLLALTLLTP------PGEMGADIAVGS 264 (954)
T ss_pred ------cc-cEEEE-EEecCCCCeeeccHHHHHHHHHHcCC-----EEEEEehhhhccCCCC------hhhcCCCEEEee
Confidence 11 12334 44457889999999999999999999 9999997633222110 111249999999
Q ss_pred CCCCC-----CCCCCceeEEeehhhhhhhcCC-cc----------ccC---CCC---CcccCCCCChhH-----HHHHHH
Q 011842 305 GHKFV-----GCPMPCGVQITRMEHINVLSSN-VE----------YLA---SRD---ATIMGSRNGHAP-----IFLWYT 357 (476)
Q Consensus 305 ~hK~l-----~~p~~~G~l~~~~~~~~~l~~~-~~----------yl~---~~~---~~~~~sr~~~~~-----l~~~~~ 357 (476)
+|||+ |+| +.|++++++++.+.++.. .. |.. ... ....++.+.... +..+..
T Consensus 265 ~qkfg~P~g~GGP-~aGflavr~~~~r~lpgrivG~s~d~~g~~~~~lalqtReqhiRrekaTsNict~qaL~a~~a~~y 343 (954)
T PRK05367 265 AQRFGVPMGFGGP-HAAYFAVRDAYKRSMPGRIVGVSVDAAGNPALRLALQTREQHIRREKATSNICTAQVLLAVMASMY 343 (954)
T ss_pred CcccCCCCCCCCC-CEEEEEECHHHHhhCCCCeeeeecccCCCcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 99994 333 599999999876655321 11 110 000 001122221111 222233
Q ss_pred HHHhChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecC-CcHHHh-----hceeeccc-CCEEEEEEcCC
Q 011842 358 LNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERP-QDEEFV-----RRWQLACQ-GNIAHVVVMPN 430 (476)
Q Consensus 358 l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~-~~~~~~-----~~~~l~~~-~~~lRv~~~~~ 430 (476)
+.++|.+|++++.++.+.++.|++++|++.|+....++...++.|..+ +..++. +++.+... .+.+|++++..
T Consensus 344 ~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~~G~~~~~~~~f~~~~~~~~~~~~~i~~~l~~~gi~~~~~~~~~l~is~~e~ 423 (954)
T PRK05367 344 AVYHGPEGLKAIARRVHRLAAILAAGLRALGLEVVHDSFFDTLTVEVGGDAAAVLARALAAGINLRRVDDDHVGISLDET 423 (954)
T ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHHHHhcCcccCCCCCCCeEEEeCCCCHHHHHHHHHHCCceeccccCCEEEEEeccc
Confidence 466899999999999999999999999887776543444567777765 223332 23444333 56799999999
Q ss_pred CCHHHHHHHHHHHH
Q 011842 431 VTIDKLDDFLNELI 444 (476)
Q Consensus 431 ~T~edid~~~~~l~ 444 (476)
+|++|||+|+++|.
T Consensus 424 ~t~~did~l~~~l~ 437 (954)
T PRK05367 424 TTREDLAALLAVFG 437 (954)
T ss_pred CCHHHHHHHHHHHc
Confidence 99999999999996
No 200
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.81 E-value=1.3e-17 Score=174.90 Aligned_cols=204 Identities=9% Similarity=-0.055 Sum_probs=139.7
Q ss_pred CCCCcCCcchHHHHHHHHHhhCCCCCCcccCccchhhHHHHHHHHHHH-HHHcCC--CCC-cccEEEcCCchhHHHHHHH
Q 011842 101 GYPYNLDFDYGALAQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWF-ARLWEL--ENN-EYWGYITNCGTEGNLHGIL 176 (476)
Q Consensus 101 g~p~~~~~~~~~l~~~l~~~~n~~g~~~~~~~~~~~~~~le~~~~~~l-a~l~g~--~~~-~~~g~~t~ggt~An~~al~ 176 (476)
|.|++.. + ..+.++..... |+. ++.+.+..++++++.+++ .+..+. .+. +..+++|+|+++|+..++.
T Consensus 108 g~p~~~~-~-~~v~e~~~~~~---~~~---Y~~~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I~vT~Ga~~al~~~~~ 179 (527)
T PRK09275 108 DQLGFDA-D-EFVYELVDGII---GDN---YPVPDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFAVEGGTAAMCYIFD 179 (527)
T ss_pred CCCCCCC-C-HHHHHHHHHHh---cCC---CCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHH
Confidence 6676544 2 34444444333 222 333446778999988744 443332 221 2369999999999998877
Q ss_pred HHH---hhCCCcEEEecCCCchHHHHHHHHcCCe--EEEEeCCC--CCccCHHHHHHHHHcCCCCcEEEEEeeCCCcccc
Q 011842 177 VGR---EVFPDGILYASRESHYSVFKAARMYRME--CVKVDCLI--SGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGA 249 (476)
Q Consensus 177 aa~---~~~p~~~Vl~s~~~H~S~~~~~~~~G~~--v~~v~~~~--~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~ 249 (476)
+.. -..|||.|++.++.|..+...+++.|.. ++.++.++ ++.+|+++|++++.++++ +|++++|+||||.
T Consensus 180 aL~~~~ll~pGD~Vlv~~P~y~~Y~~~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~~~tk---ai~l~nP~NPTG~ 256 (527)
T PRK09275 180 SLKENGLLKAGDKIALMTPIFTPYLEIPELPRYDLEVVHINADEENEWQYPDSELEKLRDPSIK---ALFLVNPSNPPSV 256 (527)
T ss_pred HHhhhhcCCCCCEEEEeCCChHHHHHHHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcCCCCC---EEEEeCCcCCcCC
Confidence 521 1139999999999999999999988654 45555442 468999999998876665 7888899999999
Q ss_pred ccC---HHHHHHHHHH--hCCCCCceEEEEecCcccccccccccCCCCCCcccccEEEEcCCCCC-CCCCCceeEEeehh
Q 011842 250 VDD---LDLVIQTLEE--SGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKPIGSVSVSGHKFV-GCPMPCGVQITRME 323 (476)
Q Consensus 250 id~---l~~I~~ia~~--~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~~Dsi~~s~hK~l-~~p~~~G~l~~~~~ 323 (476)
+-+ +++|+++|++ +++ ||++|++|+.+... +.+.......--++..|+.|.+ +++|++|+++.+++
T Consensus 257 v~s~e~l~~I~~ia~~~~~~l-----~II~DEvY~~f~~~---~~s~~~~~~~~~I~v~SfSK~f~mtG~RlG~i~~~~~ 328 (527)
T PRK09275 257 AMSDESLEKIADIVNEKRPDL-----MIITDDVYGTFVDD---FRSLFAVLPYNTILVYSFSKYFGATGWRLGVIALHED 328 (527)
T ss_pred CCCHHHHHHHHHHHHhcCCCc-----EEEECCCChhhccc---ccCHHHhCCCCEEEEeehhhhccCcHhHHhhhhcCch
Confidence 966 7888888965 488 99999999865432 1111111111124456677766 69999999999875
No 201
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.81 E-value=5.6e-18 Score=173.83 Aligned_cols=261 Identities=14% Similarity=0.039 Sum_probs=185.9
Q ss_pred HHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHH----HHHHHcCCeEEEEeCCCCC
Q 011842 142 VGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVF----KAARMYRMECVKVDCLISG 217 (476)
Q Consensus 142 ~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~----~~~~~~G~~v~~v~~~~~g 217 (476)
+++.+.++++.|.+. +++|+||++|+..++.+... ||+.|+++.+.|.+.. ..++.+|++++.++..
T Consensus 68 ~~Le~~lA~l~g~~~----~l~~~sgt~Ai~~~l~al~~--~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~~--- 138 (394)
T PRK07050 68 LALAQRLAEIEGGRH----ALLQPSGLAAISLVYFGLVK--AGDDVLIPDNAYGPNRDHGEWLARDFGITVRFYDPL--- 138 (394)
T ss_pred HHHHHHHHHHhCCCe----EEEeccHHHHHHHHHHHHhC--CCCEEEEecCCcccHHHHHHHHHHhcCeEEEEECCC---
Confidence 456667888888653 89999999999999988765 9999999999998755 3567779999888753
Q ss_pred ccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCccc
Q 011842 218 EIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKP 297 (476)
Q Consensus 218 ~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~ 297 (476)
+.++|++++.++++ +|++++++|++|.+.|+++|+++|+++|+ ++++|++|+.+... +. ++ .+
T Consensus 139 --~~~~l~~~i~~~tk---lV~le~p~Np~~~~~di~~I~~ia~~~gi-----~livD~a~a~~~~~--~~---l~--~G 201 (394)
T PRK07050 139 --IGAGIADLIQPNTR---LIWLEAPGSVTMEVPDVPAITAAARARGV-----VTAIDNTYSAGLAF--KP---FE--HG 201 (394)
T ss_pred --CHHHHHHhcCCCCe---EEEEECCCCCCccHhhHHHHHHHHHHcCC-----EEEEECCccccccc--CH---HH--cC
Confidence 55788888877665 88899999999999999999999999999 99999999764431 10 11 23
Q ss_pred ccEEEEcCCCCCCCCCC--ceeEEeehh-hhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHH
Q 011842 298 IGSVSVSGHKFVGCPMP--CGVQITRME-HINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCL 374 (476)
Q Consensus 298 ~Dsi~~s~hK~l~~p~~--~G~l~~~~~-~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~ 374 (476)
+|+.+.|++|+++++.+ .|+++++++ +.+.+.....++. ++ ..+...|.+++ +.+.+..++++..
T Consensus 202 aDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~~~~~~G-------~~---~~~~~a~l~lr--~l~tl~~Rl~~~~ 269 (394)
T PRK07050 202 VDISVQALTKYQSGGSDVLMGATITADAELHAKLKLARMRLG-------IG---VSADDCSLVLR--GLPSLQVRLAAHD 269 (394)
T ss_pred CeEEEEECCceecCCCCeeEEEEEECCHHHHHHHHHHHHhcC-------CC---CCHHHHHHHHc--CCCcHHHHHHHHH
Confidence 79999999999986654 677777654 4444422222221 11 22445565554 4567888999999
Q ss_pred HHHHHHHHHHHhcCCe-EeecCCeeEEEEecCCcHHHhhceeecccCCEEEEEEcCCCCHHHHHHHHHHHHHH
Q 011842 375 RNAHYLKDRLLDAGIS-AMLNELSSTVVFERPQDEEFVRRWQLACQGNIAHVVVMPNVTIDKLDDFLNELIEN 446 (476)
Q Consensus 375 ~~a~~l~~~L~~~g~~-~~~~~~~~iv~f~~~~~~~~~~~~~l~~~~~~lRv~~~~~~T~edid~~~~~l~~~ 446 (476)
+++..+.+.|++.+.. .+..|... ..|. .....+. ....++.+++.+....+.+++++|++.|+..
T Consensus 270 ~~a~~la~~L~~~p~v~~v~~p~l~----~~p~-~~~~~~~-~~~~g~~~s~~l~~~~~~~~~~~~~~~l~~~ 336 (394)
T PRK07050 270 RSALEVAEWLKARPEIATVLHPALP----DCPG-HAFWMRD-FTGAGGLFSVVFDERYSPAQVDAFVEALELF 336 (394)
T ss_pred HHHHHHHHHHHhCCCccEEECCCCC----CCcc-HHHHHHh-CCCCceEEEEEECCCCCHHHHHHHHHcCCCC
Confidence 9999999999987643 23333210 1111 1122221 1234567888888777899999999998754
No 202
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.81 E-value=2.7e-17 Score=161.67 Aligned_cols=302 Identities=18% Similarity=0.232 Sum_probs=217.2
Q ss_pred cchhhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhh------CCCcEEEecCCCchHHHHHHHHcCC
Q 011842 133 YGVHSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREV------FPDGILYASRESHYSVFKAARMYRM 206 (476)
Q Consensus 133 ~~~~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~------~p~~~Vl~s~~~H~S~~~~~~~~G~ 206 (476)
...+..++-.++.+||++..|++.- ..--+.|+++-++++++.|.. ..++++++++.+|...-..+.+.|+
T Consensus 103 ~vqG~l~li~~Lq~~L~~ITG~Dav---sLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNPASAam~G~ 179 (496)
T COG1003 103 QVQGYLELIYELQEWLKEITGMDAV---SLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNPASAAMAGF 179 (496)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCcee---eccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCChhhHhhcCc
Confidence 3446778999999999999999841 333467889999999888764 2457999999999999999999999
Q ss_pred eEEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccc-cCHHHHHHHHHHhCCCCCceEEEEecCcccccccc
Q 011842 207 ECVKVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAV-DDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPF 285 (476)
Q Consensus 207 ~v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~i-d~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~ 285 (476)
+|+.|+++++|.+|+++|++++.+++. .+.+|.|+|- |.+ .+|.+|+++.+++|. .+..|||---.++-.
T Consensus 180 ~VV~V~~~~~G~VDlddLk~k~~~~~A---alMiTnPsT~-GvFE~~I~ei~~ivH~~Gg-----~vY~DGANlNA~vG~ 250 (496)
T COG1003 180 KVVVVKCDENGNVDLDDLRAKAEDNLA---ALMITNPSTL-GVFEEDIREICEIVHEAGG-----QVYYDGANLNAIVGL 250 (496)
T ss_pred eEEEEecCCCCCccHHHHHHHhcccee---EEEeccCccc-ccchhhHHHHHHHHHHcCC-----EEEecCcchhhhhcc
Confidence 999999999999999999999986653 7888887755 777 579999999999999 999999953222211
Q ss_pred cccCCCCCCcccccEEEEcCCCCCCCC-----CCceeEEeehhhhhhhcCC------ccccCCCC--------CcccCCC
Q 011842 286 VKKAPKVSFKKPIGSVSVSGHKFVGCP-----MPCGVQITRMEHINVLSSN------VEYLASRD--------ATIMGSR 346 (476)
Q Consensus 286 ~~~~~~~~~~~~~Dsi~~s~hK~l~~p-----~~~G~l~~~~~~~~~l~~~------~~yl~~~~--------~~~~~sr 346 (476)
.+ .+.-++|++-++.||.+.+| +|.|-+.++..+..-++.. ..|....+ ..+.|+.
T Consensus 251 ~r-----PGd~G~DV~HlNLHKTF~iPHGGGGPG~GPvgVk~~L~pfLP~p~~~~~~~~y~~~~~~~~s~g~~~a~~Gs~ 325 (496)
T COG1003 251 AR-----PGDMGFDVVHLNLHKTFCIPHGGGGPGAGPVGVKAHLAPFLPGPVVYHDVGEYRLDYDGKKSIGVSAAPYGSA 325 (496)
T ss_pred cc-----ccccccceEEeecccccccCCCCCCCCCCceehHhhccccCCCCcccCCCccccccCCCCccceeeccccCcc
Confidence 11 12234899999999998766 4566688887765544431 12221111 1122222
Q ss_pred CChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCC---eeEEEEecCC--------cHHHhh---
Q 011842 347 NGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNEL---SSTVVFERPQ--------DEEFVR--- 412 (476)
Q Consensus 347 ~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~---~~iv~f~~~~--------~~~~~~--- 412 (476)
......|+.+..+|.+|+++.-+...-+|+|+..+|+.. +.++..+. ..-+++.... ..++.+
T Consensus 326 --~il~~a~~YI~~mG~~GL~~ase~AvLNANYia~rL~~~-y~~~y~~~~~~~HE~ild~r~l~~~~Gv~~~DvAKrLl 402 (496)
T COG1003 326 --SILPIAWAYIRMMGADGLKQASEVAVLNANYIARRLKGY-YPVPYTGENRVAHECILDARPLKKETGVRALDVAKRLL 402 (496)
T ss_pred --hHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhhc-CccccCCCCcceeEEEeechHhHhhcCCcHHHHHHHHH
Confidence 123568999999999999999999999999999999862 22222222 3333443210 112222
Q ss_pred --ceeecc------cCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhcC
Q 011842 413 --RWQLAC------QGNIAHVVVMPNVTIDKLDDFLNELIENRSTWYEDG 454 (476)
Q Consensus 413 --~~~l~~------~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~~~~ 454 (476)
+|+-++ -.+.+.|-.+..-|++++|+|+++|.+++++..+..
T Consensus 403 D~GfHaPT~~FPliV~~tLMIEPTEsEsk~eLDrf~dami~I~~Ea~~~~ 452 (496)
T COG1003 403 DYGFHAPTMYFPLIVAGTLMIEPTESESKEELDRFIDAMIAIREEADAVP 452 (496)
T ss_pred hcCCCCCcccCccccccceeecCCCCCCHHHHHHHHHHHHHHHHHHHhcc
Confidence 222221 235677777888899999999999999999987764
No 203
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.80 E-value=1.4e-17 Score=170.03 Aligned_cols=210 Identities=15% Similarity=0.093 Sum_probs=155.4
Q ss_pred HHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHH----HHHHcCCeEEEEeCCCC
Q 011842 141 EVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFK----AARMYRMECVKVDCLIS 216 (476)
Q Consensus 141 e~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~----~~~~~G~~v~~v~~~~~ 216 (476)
.+++.+.+++++|.+. .+++++|+.|+..++. .. .+|+.|+++...|.+... .+...|++++.++.+
T Consensus 49 ~~~le~~la~l~g~~~----~l~~~sG~~al~~~l~-ll--~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~-- 119 (378)
T TIGR01329 49 RTALESLLAKLDKADR----AFAFSSGMAALDVITR-LL--NNGDEIIAGDDLYGGTDRLLTQVVPRSGVVVVHVDTT-- 119 (378)
T ss_pred HHHHHHHHHHHhCCCc----EEEECCHHHHHHHHHH-Hh--CCCCEEEEcCCCchHHHHHHHHHHHHcCcEEEEeCCC--
Confidence 4567777889998853 7778888887766554 33 389999999999987654 455679999999874
Q ss_pred CccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCcc
Q 011842 217 GEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKK 296 (476)
Q Consensus 217 g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~ 296 (476)
|+++++++++++++ +|+++++++++|.+.|+++|+++|++||+ +++||++|+.+... .....
T Consensus 120 ---d~~~le~~i~~~tk---lv~le~psnptg~v~dl~~I~~la~~~g~-----~vivD~a~~~~~~~-------~~l~~ 181 (378)
T TIGR01329 120 ---DLDKVKAALGPKTK---LVLLESPTNPLQKIVDIRKISEMAHAQNA-----LVVVDNTMMSPLLC-------NPLEL 181 (378)
T ss_pred ---CHHHHHHhcCcCce---EEEEECCCCCCCeeecHHHHHHHHHHcCC-----EEEEECCCcccccC-------Chhhc
Confidence 89999999976665 88899999999999999999999999999 99999998654321 11112
Q ss_pred cccEEEEcCCCCCCCCCC--ceeEEeehhh-hhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHH
Q 011842 297 PIGSVSVSGHKFVGCPMP--CGVQITRMEH-INVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKC 373 (476)
Q Consensus 297 ~~Dsi~~s~hK~l~~p~~--~G~l~~~~~~-~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~ 373 (476)
++|+++.|+|||+++|.+ .|+++++++. .+.+....... |.. ..+...|.. ..+.+.+..++++.
T Consensus 182 g~Di~v~S~tK~l~G~~~~~~G~v~~~~~~~~~~~~~~~~~~--------G~~--~~~~~a~l~--~~~l~tl~~R~e~~ 249 (378)
T TIGR01329 182 GADIVYHSATKFLAGHSDVMAGVLAVKGEEIAKKVYFLQNST--------GSG--LAPFDCWLL--LRGIKTLAIRIEKQ 249 (378)
T ss_pred CCcEEEEecceeccCCccceeEEEEeCcHHHHHHHHHHHHhc--------CCc--CCHHHHHHH--HccCCCHHHHHHHH
Confidence 489999999999998866 8999887653 23332111111 111 112333433 33567889999999
Q ss_pred HHHHHHHHHHHHhcCC
Q 011842 374 LRNAHYLKDRLLDAGI 389 (476)
Q Consensus 374 ~~~a~~l~~~L~~~g~ 389 (476)
.+++..+.+.|++.+.
T Consensus 250 ~~na~~la~~L~~~~~ 265 (378)
T TIGR01329 250 QENARAIAMFLSTHPR 265 (378)
T ss_pred HHHHHHHHHHHHhCCC
Confidence 9999999999998753
No 204
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.80 E-value=7.1e-17 Score=166.41 Aligned_cols=282 Identities=13% Similarity=0.073 Sum_probs=179.6
Q ss_pred HHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCC------------eE
Q 011842 141 EVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRM------------EC 208 (476)
Q Consensus 141 e~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~------------~v 208 (476)
..++.+++++++|.+. ....++|+||++|+..++.+++...+..+|.+....|.+...+....|. ++
T Consensus 87 ~~~la~~l~~~~~~~~-~~~v~~~~sgsea~~~al~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (398)
T PRK03244 87 QIALAERLVELLGAPE-GGRVFFCNSGAEANEAAFKLARLTGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGV 165 (398)
T ss_pred HHHHHHHHHHhCCCCC-CCEEEEeCchHHHHHHHHHHHHHHCCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCc
Confidence 3577788888888542 1359999999999999999888732234444444444443333333332 23
Q ss_pred EEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC----HHHHHHHHHHhCCCCCceEEEEecCccccccc
Q 011842 209 VKVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD----LDLVIQTLEESGFTQDRFYIHCDGALFGLMMP 284 (476)
Q Consensus 209 ~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~----l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~ 284 (476)
..+|. .|++.|++.+.+ ++.+|++....+++|.+.| +++|.++|++||+ ++++|++|.++..
T Consensus 166 ~~~~~-----~d~~~l~~~~~~---~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~-----llI~DEv~~g~gr- 231 (398)
T PRK03244 166 EHVPY-----GDVDALAAAVDD---DTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGA-----LLVLDEVQTGIGR- 231 (398)
T ss_pred eEeCC-----CCHHHHHHhhcC---CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCC-----EEEEeccccCCcc-
Confidence 33443 288999998853 3457777777899999987 8999999999999 9999999976422
Q ss_pred ccccCCCCCCcc-cccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhCh
Q 011842 285 FVKKAPKVSFKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGY 363 (476)
Q Consensus 285 ~~~~~~~~~~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~ 363 (476)
..+.. .+.... ..|.+++ .|+++.++++|+++.++++.+.+.... + ..++.+ .++.+.++++.+..
T Consensus 232 ~g~~~-~~~~~~~~pDi~t~--sK~l~~G~~ig~~~~~~~~~~~~~~~~-~----~~t~~~-----~~~~~aaa~a~l~~ 298 (398)
T PRK03244 232 TGAWF-AHQHDGVTPDVVTL--AKGLGGGLPIGACLAFGPAADLLTPGL-H----GSTFGG-----NPVACAAALAVLDT 298 (398)
T ss_pred cchHH-hhhhhCCCCCEEEE--chhhhCCcccEEEEEcHHHHhhccCCC-C----cCCCCC-----CHHHHHHHHHHHHH
Confidence 11110 011111 2576655 599998899999999988766553210 1 112222 23344444444321
Q ss_pred hcHHHHHHHHHHHHHHHHHHHHhcCCeEe--ecCCeeEEEEecCC--cHHH-----hhceeecc-cCCEEEEEEcCCCCH
Q 011842 364 KGFQKEVQKCLRNAHYLKDRLLDAGISAM--LNELSSTVVFERPQ--DEEF-----VRRWQLAC-QGNIAHVVVMPNVTI 433 (476)
Q Consensus 364 ~g~~~~~~~~~~~a~~l~~~L~~~g~~~~--~~~~~~iv~f~~~~--~~~~-----~~~~~l~~-~~~~lRv~~~~~~T~ 433 (476)
-.-.+..++..++.++|++.|++.+...+ .....+++.+..+. ...+ .+++.+.. ..+.+|++++..+|+
T Consensus 299 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~l~~~Gv~~~~~~~~~iR~~p~~~~t~ 378 (398)
T PRK03244 299 IASEGLLENAERLGEQLRAGIEALGHPLVDHVRGRGLLLGIVLTAPVAKAVEAAAREAGFLVNAVAPDVIRLAPPLIITD 378 (398)
T ss_pred HHhccHHHHHHHHHHHHHHHHHhcCCCceeeEeeccEEEEEEEeccHHHHHHHHHHHCCeEEeecCCCEEEEECCCcCCH
Confidence 11134567777888999999998654211 22234455554432 2222 23444433 347899999999999
Q ss_pred HHHHHHHHHHHHHHHHH
Q 011842 434 DKLDDFLNELIENRSTW 450 (476)
Q Consensus 434 edid~~~~~l~~~~~~~ 450 (476)
+||++++++|+++.++.
T Consensus 379 ~~i~~~~~~l~~~l~~~ 395 (398)
T PRK03244 379 AQVDAFVAALPAILDAA 395 (398)
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 99999999999988653
No 205
>PLN02397 aspartate transaminase
Probab=99.80 E-value=5.7e-17 Score=168.26 Aligned_cols=293 Identities=10% Similarity=-0.019 Sum_probs=184.5
Q ss_pred chhhHHHHHHHHHHHHHHcCCCCCcccE--EEcCCchhH--HHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEE
Q 011842 134 GVHSRQFEVGVLDWFARLWELENNEYWG--YITNCGTEG--NLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECV 209 (476)
Q Consensus 134 ~~~~~~le~~~~~~la~l~g~~~~~~~g--~~t~ggt~A--n~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~ 209 (476)
..|..++++++.+|+.+..+...++..+ ..+.+|+.+ ...++.+... ||+.|++++++|..+...++..|++++
T Consensus 90 ~~G~~~LR~aia~~~~~~~~~~~~~~~i~~~~i~~g~Ga~~l~~~~~~~~~--pGd~Vlv~~P~y~~y~~~~~~~g~~~~ 167 (423)
T PLN02397 90 IEGLAEFNKLSAKLAYGADSPAIKENRVATVQCLSGTGSLRLGAEFLARFY--PGSTIYIPNPTWGNHHNIFRDAGVPVR 167 (423)
T ss_pred cCCCHHHHHHHHHHHcCCCCchhhcCeeEeeecccchHHHHHHHHHHHHhC--CCCEEEEeCCCchhHHHHHHHcCCeEE
Confidence 4477899999999986543322111112 224444433 4444444444 999999999999999999999999999
Q ss_pred EEeC-C-CCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCccccccc
Q 011842 210 KVDC-L-ISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMP 284 (476)
Q Consensus 210 ~v~~-~-~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~ 284 (476)
.+|+ + +++.+|++.+++.+...+.+..+++.+++.|+||.+-+ +++|+++|++||+ |+++|++|..+.+.
T Consensus 168 ~v~l~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~-----~vI~De~Y~~l~~~ 242 (423)
T PLN02397 168 TYRYYDPKTRGLDFDGLLEDLKAAPDGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNH-----LPFFDSAYQGFASG 242 (423)
T ss_pred EeecccCcCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCc-----EEEEecccCCccCC
Confidence 9997 3 34789999999988754333457778889999999954 7788999999999 99999999877652
Q ss_pred cc--ccCCCCCCc-cc-ccEEEEcCCCCCC-CCCCceeEE--ee-hhhhhhh----cCCccccCCCCCcccCCCCChhHH
Q 011842 285 FV--KKAPKVSFK-KP-IGSVSVSGHKFVG-CPMPCGVQI--TR-MEHINVL----SSNVEYLASRDATIMGSRNGHAPI 352 (476)
Q Consensus 285 ~~--~~~~~~~~~-~~-~Dsi~~s~hK~l~-~p~~~G~l~--~~-~~~~~~l----~~~~~yl~~~~~~~~~sr~~~~~l 352 (476)
.. ...+...+. .. --++..|+.|.++ ++|++||++ .. .+.++.+ .....+. ..+. ..+
T Consensus 243 ~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~G~RvG~~v~~~~~~~~~~~~~~~~~~~~~~~-------~~~~---~~~ 312 (423)
T PLN02397 243 DLDADAQSVRMFVEDGHEILVAQSYAKNMGLYGERVGALSVVCKSADVAVRVKSQLKLIARPM-------YSNP---PIH 312 (423)
T ss_pred chhhhhHHHHHHHhcCCcEEEEEECcccCCCccccceEEEEEeCCHHHHHHHHHHHHHHHhcc-------cCCC---cHH
Confidence 10 111101111 11 1245567889887 799999985 43 3333222 1111111 1111 123
Q ss_pred HHHHHHHHhChh--------cHHHHHHHHHHHHHHHHHHHHhcC----CeEeecCCeeEEEEecCCcHHHhh----ceee
Q 011842 353 FLWYTLNRKGYK--------GFQKEVQKCLRNAHYLKDRLLDAG----ISAMLNELSSTVVFERPQDEEFVR----RWQL 416 (476)
Q Consensus 353 ~~~~~l~~~g~~--------g~~~~~~~~~~~a~~l~~~L~~~g----~~~~~~~~~~iv~f~~~~~~~~~~----~~~l 416 (476)
.++++...+... .+++..++..++++.+.+.|++.+ +....++++..++...+ .++.+ +..+
T Consensus 313 ~q~~~~~~L~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~~~~~~~~~~p~gg~fl~~~l~--~~~~~~Ll~~~~V 390 (423)
T PLN02397 313 GASIVATILGDPELFSEWTKELKGMADRIISMRQKLYDALEARGSPGDWSHITKQIGMFSFTGLN--KEQVDRMTKEYHI 390 (423)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccCCceEEEecCCC--HHHHHHHHHhCCE
Confidence 444444433221 145667788889999999999986 43333444444444343 23433 2223
Q ss_pred cccCCEEEEEEcCCCCHHHHHHHHHHHHHHH
Q 011842 417 ACQGNIAHVVVMPNVTIDKLDDFLNELIENR 447 (476)
Q Consensus 417 ~~~~~~lRv~~~~~~T~edid~~~~~l~~~~ 447 (476)
...++. |+++. ..+.++|+.+++.|+++.
T Consensus 391 ~v~~~~-Ri~~~-~~~~~~i~~~~~~i~~~~ 419 (423)
T PLN02397 391 YMTRDG-RISMA-GLSSKNVPYLADAIHAVV 419 (423)
T ss_pred EECCCC-eEEEe-eCCHHHHHHHHHHHHHHH
Confidence 222222 88773 388999999999999885
No 206
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.80 E-value=1.5e-17 Score=169.45 Aligned_cols=209 Identities=12% Similarity=0.122 Sum_probs=154.9
Q ss_pred HHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHH----HHHcCCeEEEEeCCCCCc
Q 011842 143 GVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKA----ARMYRMECVKVDCLISGE 218 (476)
Q Consensus 143 ~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~----~~~~G~~v~~v~~~~~g~ 218 (476)
.+.+.++++.|.+. +++|+||+.|+..++.+... ||+.|+++++.|.+.... .+.+|+++..++.+
T Consensus 54 ~lE~~lA~l~g~~~----~~~~~sG~~Ai~~al~all~--~GD~Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~d~~---- 123 (377)
T TIGR01324 54 ALQDAMCELEGGAG----CYLYPSGLAAVTNSILAFVK--AGDHVLMVDSAYEPTRYFCDIVLKRMGVDITYYDPL---- 123 (377)
T ss_pred HHHHHHHHHhCCCc----EEEECcHHHHHHHHHHHhcC--CCCEEEEcCCCcHHHHHHHHHHHHhcCcEEEEECCC----
Confidence 44445777788653 88999999999999887755 999999999988765543 35568888877543
Q ss_pred cCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCcccc
Q 011842 219 IDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKPI 298 (476)
Q Consensus 219 ~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~~ 298 (476)
+.+.|++++.++++ +|++++++|++|.+.|+++|+++|+++|+ +++||++|+.+.... ....++
T Consensus 124 -~~e~l~~~i~~~tk---lV~lesp~Np~g~~~dl~~I~~la~~~g~-----~livD~t~a~g~~~~-------pl~~ga 187 (377)
T TIGR01324 124 -IGEDIATLIQPNTK---VLFLEAPSSITFEIQDIPAIAKAARNPGI-----VIMIDNTWAAGLLFK-------PLEHGV 187 (377)
T ss_pred -CHHHHHHhcCCCce---EEEEECCCCCCCcHHHHHHHHHHHHHcCC-----EEEEECCCccccccC-------ccccCc
Confidence 23788888877665 89999999999999999999999999999 999999998655421 111248
Q ss_pred cEEEEcCCCCCCCCCC--ceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHHHH
Q 011842 299 GSVSVSGHKFVGCPMP--CGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRN 376 (476)
Q Consensus 299 Dsi~~s~hK~l~~p~~--~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~ 376 (476)
|+++.|.+||++++.+ .|+++.+++..+.+.. ..++ .|+- ..+...|..++ |.+.+..++++..++
T Consensus 188 Divv~S~tK~l~G~~d~~gG~v~~~~~~~~~l~~-~~~~-------~G~~--l~p~~a~~~~r--gl~tl~~R~~~~~~~ 255 (377)
T TIGR01324 188 DISIQAGTKYLVGHSDIMIGTVVANARTWDQLRE-HSYL-------MGQM--VDADDAYTTLR--GLRTLGVRLKQHQES 255 (377)
T ss_pred eEEEecCceeccCCCCceEEEEEeCHHHHHHHHH-HHHH-------hCCC--CCHHHHHHHHh--hhhhHHHHHHHHHHH
Confidence 9999999999987644 5778777765444321 1121 1111 12455665555 446677789999999
Q ss_pred HHHHHHHHHhcCC
Q 011842 377 AHYLKDRLLDAGI 389 (476)
Q Consensus 377 a~~l~~~L~~~g~ 389 (476)
+..+.+.|++.+.
T Consensus 256 a~~la~~L~~~p~ 268 (377)
T TIGR01324 256 SLAIAKWLSEQPE 268 (377)
T ss_pred HHHHHHHHHhCCC
Confidence 9999999999764
No 207
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.80 E-value=5.4e-17 Score=170.10 Aligned_cols=206 Identities=8% Similarity=-0.087 Sum_probs=139.0
Q ss_pred ccCCCCcCCcchHHHHHHHHHhhCCCCCCcccCccchhhHH-HHHHHHHHHHHHcCCC---CCcccEEEcCCchhHHHHH
Q 011842 99 HLGYPYNLDFDYGALAQLQHFSINNLGDPFIESNYGVHSRQ-FEVGVLDWFARLWELE---NNEYWGYITNCGTEGNLHG 174 (476)
Q Consensus 99 ~~g~p~~~~~~~~~l~~~l~~~~n~~g~~~~~~~~~~~~~~-le~~~~~~la~l~g~~---~~~~~g~~t~ggt~An~~a 174 (476)
..|.|++.. ...+.++....++ +.+ +.+.+..+ .|+.+.+++.+..+.. .++.++++|+|+++|+..+
T Consensus 100 ~~g~p~~~~--~~~~~~~~~~~~~---~~Y---~~p~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat~al~~~ 171 (521)
T TIGR03801 100 VIDQLGFDP--DAFLYEMCDGIIG---DNY---PVPDRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGTAAMCYI 171 (521)
T ss_pred cCCCCCCCC--CHHHHHHHHHhhc---CCC---CCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHH
Confidence 345666542 2445555554432 222 11223344 4444446777765432 2222699999999999988
Q ss_pred HHHHH---hhCCCcEEEecCCCchHHHHHHHHc--CCeEEEEeCCC--C-----CccCHHHHHHHHHcCCCCcEEEEEee
Q 011842 175 ILVGR---EVFPDGILYASRESHYSVFKAARMY--RMECVKVDCLI--S-----GEIDCADFKAKLLQNKDKPAIINVNI 242 (476)
Q Consensus 175 l~aa~---~~~p~~~Vl~s~~~H~S~~~~~~~~--G~~v~~v~~~~--~-----g~~D~~~Le~~l~~~~~~p~~vv~t~ 242 (476)
+.+.. -..||+.|++..+.|..+...+++. |++++.+++++ + +.+|.++|++++.++++ ++++++
T Consensus 172 ~~~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~~~~k---ai~l~n 248 (521)
T TIGR03801 172 FDSLKANELLKKGDKIALMTPIFTPYLEIPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKLRDPSIK---ALFVVN 248 (521)
T ss_pred HHHHhHhhcCCCCCEEEEeCCCcHHHHHHHHHhcCCcEEEEeecccccccccccCCCCHHHHHHhcCCCCc---EEEEeC
Confidence 76621 0139999999999999999988887 56777777753 2 67999999988766555 777789
Q ss_pred CCCccccccC---HHHHHHHHHHh--CCCCCceEEEEecCcccccccccccCCCCCCcccccEEEEcCCCCC-CCCCCce
Q 011842 243 GTTVKGAVDD---LDLVIQTLEES--GFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKPIGSVSVSGHKFV-GCPMPCG 316 (476)
Q Consensus 243 gtt~tG~id~---l~~I~~ia~~~--g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~~Dsi~~s~hK~l-~~p~~~G 316 (476)
|+||||.+-+ +++|+++|++| ++ ||++|++|+.+... ..+.......--+++.|+.|.+ +++|++|
T Consensus 249 P~NPTG~vls~e~l~~I~~ia~~~~~~l-----~II~DEvY~~f~~~---~~sl~~~~~~~vI~v~SfSK~fg~~G~RlG 320 (521)
T TIGR03801 249 PSNPPSVAMSDESIEKIVDIVANDRPDL-----MILTDDVYGTFVDD---FRSLFAELPYNTIGVYSFSKYFGATGWRLG 320 (521)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCCCe-----EEEECCCchhhccc---ccchhhhCCCCEEEEEcchhhccCchhhhh
Confidence 9999999966 78888899987 88 99999999865432 1111121111124566778876 6899999
Q ss_pred eEEeehh
Q 011842 317 VQITRME 323 (476)
Q Consensus 317 ~l~~~~~ 323 (476)
+++.+++
T Consensus 321 ~i~~~~~ 327 (521)
T TIGR03801 321 TIALHKD 327 (521)
T ss_pred hhhcCch
Confidence 9999764
No 208
>PRK06460 hypothetical protein; Provisional
Probab=99.80 E-value=1.2e-17 Score=170.51 Aligned_cols=270 Identities=15% Similarity=0.106 Sum_probs=181.8
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCc----hHHHHHHHHcCCeEEEEeCC
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESH----YSVFKAARMYRMECVKVDCL 214 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H----~S~~~~~~~~G~~v~~v~~~ 214 (476)
....++++.++++.|.+. .+++++|++|+..++.+... ||+.|+++.+.+ ..+...++..|++++.++.+
T Consensus 45 p~~~~L~~~lA~l~g~~~----~v~~~sG~~ai~~~l~al~~--~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~~~~~ 118 (376)
T PRK06460 45 PTVLELTKKIVELENAEM----GVAFSSGMGAISTTALALLK--PGNSVLVHRDMFGRSYRFFTDYLKNWGVNVDASNPG 118 (376)
T ss_pred ccHHHHHHHHHHHhCCCc----EEEeCCHHHHHHHHHHHHhC--CCCEEEEecCCcCcHHHHHHHHHHhhCcEEEEECCC
Confidence 344456666888888864 56667788888888777655 899999987543 34557788889999888865
Q ss_pred CCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCC
Q 011842 215 ISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSF 294 (476)
Q Consensus 215 ~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~ 294 (476)
+.+.+++.+.+++ .+|++++++|++|.+.|+++|+++|+++|+ ++++|++|+.+.. . ...
T Consensus 119 -----~~~~l~~~~~~~t---klV~l~sp~NPtG~v~d~~~I~~la~~~g~-----~vivDea~~~~~~-~------~~l 178 (376)
T PRK06460 119 -----SDNIIEKAKSKRY---DVVFVENITNPLLRVVDITELSKVCKENGS-----ILIVDATFSTPIN-Q------KPL 178 (376)
T ss_pred -----CHHHHHHhcCCCc---eEEEEECCCCCCCcccCHHHHHHHHHHcCC-----EEEEECCcCcccc-C------Chh
Confidence 2344555444444 488889999999999999999999999999 9999999875321 1 111
Q ss_pred cccccEEEEcCCCCCCCCC--CceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHHH
Q 011842 295 KKPIGSVSVSGHKFVGCPM--PCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQK 372 (476)
Q Consensus 295 ~~~~Dsi~~s~hK~l~~p~--~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~ 372 (476)
...+|+++.|++|+++++. ..|+++.++++++.+.....+.. .+ ..+...|.+++ +.+.++.++++
T Consensus 179 ~~~~divv~S~sK~l~G~~~~~~G~~~~~~~l~~~l~~~~~~~g-------~~---~~~~~a~~~l~--~~~~l~~r~~~ 246 (376)
T PRK06460 179 ELGADIVVHSASKFLAGHNDVIAGLAAGYGKLLNVIDQMRRTLG-------TS---LDPHAAYLTLR--GIKTLKIRMDV 246 (376)
T ss_pred hcCCCEEEeecceeccCCCCceEEEEecCHHHHHHHHHHHHhcC-------CC---CCHHHHHHHHh--chhhHHHHHHH
Confidence 1237999999999987432 48888887776655532222211 11 11244454444 45667888999
Q ss_pred HHHHHHHHHHHHHhcCCe-EeecC-----------------CeeEEEEecCCc----HHHhhceee--------------
Q 011842 373 CLRNAHYLKDRLLDAGIS-AMLNE-----------------LSSTVVFERPQD----EEFVRRWQL-------------- 416 (476)
Q Consensus 373 ~~~~a~~l~~~L~~~g~~-~~~~~-----------------~~~iv~f~~~~~----~~~~~~~~l-------------- 416 (476)
..++++++.+.|++.+.. .+..| ...+++|...++ ..+.+++.+
T Consensus 247 ~~~n~~~l~~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~s~~~~~~~~~~~~~~~~l~~~~~~~s~Gg~~sl~ 326 (376)
T PRK06460 247 INRNAEQIAEFLEGHPKVVKVYYPGLKSHVDYEIARRVLKGFGGVLSFEVNGGQESALKVMKSLKLIIPAQTLGGVNSVI 326 (376)
T ss_pred HHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCcHHHHHHHHHhCCcceeccCCCCCceEE
Confidence 999999999999987532 22211 135777876432 233333321
Q ss_pred --c-----------------ccCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 011842 417 --A-----------------CQGNIAHVVVMPNVTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 417 --~-----------------~~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~ 450 (476)
+ ...+.+|+++. -||.|.++++|+++.+.+
T Consensus 327 ~~p~~~~~~~~~~~~~~~~gi~~~liR~svG----lE~~~dl~~dl~~al~~~ 375 (376)
T PRK06460 327 SHPATMSHRTLSLEERKIVGITDSLLRLSVG----IEDVNDLIEDLDRALSTL 375 (376)
T ss_pred eCccccccccCCHHHHHhcCCCCCeEEEEec----cCCHHHHHHHHHHHHHhh
Confidence 0 01256788876 567788888888877654
No 209
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.80 E-value=3.4e-17 Score=166.79 Aligned_cols=275 Identities=14% Similarity=0.052 Sum_probs=183.6
Q ss_pred hhHHHHHHHHHHHHHHcCCC-CCcccEEEcCCchhHHHHHHHHH-HhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeC
Q 011842 136 HSRQFEVGVLDWFARLWELE-NNEYWGYITNCGTEGNLHGILVG-REVFPDGILYASRESHYSVFKAARMYRMECVKVDC 213 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~-~~~~~g~~t~ggt~An~~al~aa-~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~ 213 (476)
+..++++.+.+|+.+..|.+ .++.++++|+|+++++...+.+. .. +|+.|++++++|..+..+++.+|++++.++
T Consensus 63 G~~~lr~~ia~~l~~~~~~~~~~~~~I~it~G~~~~i~~~~~~l~~~--~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~- 139 (364)
T PRK07865 63 GTPELREAIVGWLARRRGVTGLDPAAVLPVIGSKELVAWLPTLLGLG--PGDVVVIPELAYPTYEVGARLAGATVVRAD- 139 (364)
T ss_pred CCHHHHHHHHHHHHHHcCCCCCCcccEEEccChHHHHHHHHHHHcCC--CCCEEEECCCCcccHHHHHHhcCCEEEecC-
Confidence 56799999999999988865 44456999999999988765554 34 899999999999999999999999988775
Q ss_pred CCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCcccccccccccCC
Q 011842 214 LISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAP 290 (476)
Q Consensus 214 ~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~ 290 (476)
++++++. . .+.+|++++++|+||.+-+ +++|+++|++||+ ++++|++|+.+.+.. ....
T Consensus 140 ------~~~~l~~---~---~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~-----~ii~De~y~~~~~~~-~~~~ 201 (364)
T PRK07865 140 ------SLTELGP---Q---RPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGA-----VVASDECYLELGWDA-EPVS 201 (364)
T ss_pred ------ChhhCCc---c---cceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCC-----EEEEecchhhhccCC-CCCc
Confidence 2333322 2 2347777889999998854 7889999999999 999999998654422 1111
Q ss_pred CCCC----cc-cccEEEEcCCCCC-CCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhCh-
Q 011842 291 KVSF----KK-PIGSVSVSGHKFV-GCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGY- 363 (476)
Q Consensus 291 ~~~~----~~-~~Dsi~~s~hK~l-~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~- 363 (476)
.+.. .. .-.+++.|+.|.+ ..++++|+++.++++++.+.....+.. .+. ..+.+.++...+..
T Consensus 202 ~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~i~~~~~~~~~~~~~~~~~~-------~~~---~~~~q~~~~~~l~~~ 271 (364)
T PRK07865 202 ILDPRVCGGDHTGLLAVHSLSKQSNLAGYRAGFVAGDPALVAELLEVRKHAG-------MMV---PAPVQAAMVAALGDD 271 (364)
T ss_pred cccccccCCccceEEEEeechhccCCCceeeEEEecCHHHHHHHHHHHHhcC-------CCc---CHHHHHHHHHHhCCH
Confidence 1110 01 1246778899987 578999999998877665532221110 011 12334444444432
Q ss_pred hcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeE-EEEecCC-cHHHh-----hceee-c------ccCCEEEEEEcC
Q 011842 364 KGFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSST-VVFERPQ-DEEFV-----RRWQL-A------CQGNIAHVVVMP 429 (476)
Q Consensus 364 ~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~i-v~f~~~~-~~~~~-----~~~~l-~------~~~~~lRv~~~~ 429 (476)
+.+++..+...++++++.+.|++.|+... .+.+++ +.+..+. ..++. ++..+ + ...+++|+++..
T Consensus 272 ~~~~~~~~~~~~~~~~l~~~L~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~pg~~f~~~~~~~iRi~~~~ 350 (364)
T PRK07865 272 AHVREQRERYARRRAVLRPALEAAGFRVD-HSEAGLYLWATRGEDCWDTVAWLAERGILVAPGDFYGPAGAQHVRVALTA 350 (364)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCccc-CCCccEEEEEeCCCCHHHHHHHHHHCCEEEeCccccCcCCCCEEEEEecC
Confidence 33556677778888999999998875433 343443 3333332 22222 22222 1 124689999874
Q ss_pred CCCHHHHHHHHHHHH
Q 011842 430 NVTIDKLDDFLNELI 444 (476)
Q Consensus 430 ~~T~edid~~~~~l~ 444 (476)
+++++++.++.|+
T Consensus 351 --~~~~~~~~~~~l~ 363 (364)
T PRK07865 351 --TDERIAAAVERLA 363 (364)
T ss_pred --CHHHHHHHHHHhh
Confidence 5899999988774
No 210
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.80 E-value=1.4e-17 Score=167.26 Aligned_cols=261 Identities=13% Similarity=0.022 Sum_probs=179.0
Q ss_pred HHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccCH
Q 011842 142 VGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGEIDC 221 (476)
Q Consensus 142 ~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~ 221 (476)
.++++++++++|.+++ ..++|+|+++++.....+ .. ++ .|++.+++|.++...++..|++++.++ |+
T Consensus 50 ~~lr~~la~~~~~~~~--~i~~t~G~~~~i~~~~~~-l~--~g-~vl~~~p~y~~~~~~~~~~g~~~~~~~-------d~ 116 (330)
T TIGR01140 50 DELRAAAAAYYGLPAA--SVLPVNGAQEAIYLLPRL-LA--PG-RVLVLAPTYSEYARAWRAAGHEVVELP-------DL 116 (330)
T ss_pred HHHHHHHHHHhCCChh--hEEECCCHHHHHHHHHHH-hC--CC-eEEEeCCCcHHHHHHHHHcCCEEEEeC-------CH
Confidence 3555667777787643 488999999888775433 33 66 688889999999999999999998887 88
Q ss_pred HHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCc--c
Q 011842 222 ADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFK--K 296 (476)
Q Consensus 222 ~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~--~ 296 (476)
+.|++.+. .++ ++++++++|++|.+-+ +++|+++|++||+ ++++|++|..+... . +..+.. .
T Consensus 117 ~~l~~~~~-~~~---~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~-----~ii~De~y~~~~~~-~---~~~~~~~~~ 183 (330)
T TIGR01140 117 DRLPAALE-ELD---VLVLCNPNNPTGRLIPPETLLALAARLRARGG-----WLVVDEAFIDFTPD-A---SLAPQAARF 183 (330)
T ss_pred HHHHhhcc-cCC---EEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCC-----EEEEECcccccCCc-c---chhhHhccC
Confidence 99998883 343 6777889999999988 7778888899999 99999999765432 1 111111 1
Q ss_pred cccEEEEcCCCCCC-CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcH-HHHHHHHH
Q 011842 297 PIGSVSVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGF-QKEVQKCL 374 (476)
Q Consensus 297 ~~Dsi~~s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~-~~~~~~~~ 374 (476)
.-+++..+++|+++ .++++|++++++++++.+...... .. ...+.+.++.+.+....+ +...++..
T Consensus 184 ~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~-------~~-----~s~~~q~~~~~~l~~~~~~~~~~~~~~ 251 (330)
T TIGR01140 184 PGLVVLRSLTKFFGLAGLRLGFVVAHPALLARLREALGP-------WT-----VNGPARAAGRAALADTAWQAATRARLA 251 (330)
T ss_pred CCEEEEEecchhhcCchhhhhheeCCHHHHHHHHhcCCC-------CC-----chHHHHHHHHHHHhchHHHHHHHHHHH
Confidence 24578889999987 668999999998876665322111 01 123445555555543333 56678888
Q ss_pred HHHHHHHHHHHhcCCeEeecCCeeEEEEecCCcHHHhh-----ceeecc-------cCCEEEEEEcCCCCHHHHHHHHHH
Q 011842 375 RNAHYLKDRLLDAGISAMLNELSSTVVFERPQDEEFVR-----RWQLAC-------QGNIAHVVVMPNVTIDKLDDFLNE 442 (476)
Q Consensus 375 ~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~~~~~~~-----~~~l~~-------~~~~lRv~~~~~~T~edid~~~~~ 442 (476)
++++++.+.|++.+.....++.++.+.+..++..++.+ ++.+.. ..+.+|+++. +..++ ++|+.+
T Consensus 252 ~~~~~l~~~L~~~~~~~~~~~~~~f~~~~~~~~~~l~~~l~~~gi~v~pg~~f~~~~~~~iRi~~~--~~~~~-~~~~~~ 328 (330)
T TIGR01140 252 AERARLAALLARLGGLEVVGGTALFLLVRTPDAAALHEALARRGILIRDFDNFPGLDPRYLRFALP--TDEEN-DRLEEA 328 (330)
T ss_pred HHHHHHHHHHHhCCCceECCCCCeEEEEEcCCHHHHHHHHHHCCEEEEECCCCCCCCCCEEEEEec--CHHHH-HHHHHh
Confidence 89999999999987544445555555566555444432 222211 2367898875 33355 888887
Q ss_pred H
Q 011842 443 L 443 (476)
Q Consensus 443 l 443 (476)
|
T Consensus 329 l 329 (330)
T TIGR01140 329 L 329 (330)
T ss_pred h
Confidence 6
No 211
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.80 E-value=1e-16 Score=177.82 Aligned_cols=336 Identities=12% Similarity=0.045 Sum_probs=216.5
Q ss_pred CCcHHHHHHHHHHHHhcccc--cccCCCCcCCcchHHH-HHHHHHhhCCCCCCcccCccc----hhhHHHHHHHHHHHHH
Q 011842 78 EAYMAGVLARYRKTLMERTK--HHLGYPYNLDFDYGAL-AQLQHFSINNLGDPFIESNYG----VHSRQFEVGVLDWFAR 150 (476)
Q Consensus 78 ~~~~~~il~~~~~~~~~~~~--~~~g~p~~~~~~~~~l-~~~l~~~~n~~g~~~~~~~~~----~~~~~le~~~~~~la~ 150 (476)
+.+-.+++..+++....+.. +++|--.+..+.++.+ ..++.. .+.-..++||. .+.-+.-.+...++++
T Consensus 84 ~~sE~e~~~~~~~la~kN~~~~~fiG~G~y~~~~P~~v~~~i~~~----~~~~TaytPYqaEisQG~lqal~~~Qt~ia~ 159 (993)
T PLN02414 84 GLTESQMLEHMKSLASKNKVFKSYIGMGYYNTHVPPVILRNILEN----PGWYTQYTPYQAEIAQGRLESLLNYQTMITD 159 (993)
T ss_pred CCCHHHHHHHHHHHHhcCCccccccCCCCCCccCCHHHHHHHHhC----hHHHhhcCCCchHHHHHHHHHHHHHHHHHHH
Confidence 45667888888887655432 3455222222233444 333332 11111112222 2444556678899999
Q ss_pred HcCCCCCcccEEEcCCchhHHHHHHHHHHhh-CCCcEEEecCCCchHHHHHH----HHcCCeEEEEeCCCCCccCHHHHH
Q 011842 151 LWELENNEYWGYITNCGTEGNLHGILVGREV-FPDGILYASRESHYSVFKAA----RMYRMECVKVDCLISGEIDCADFK 225 (476)
Q Consensus 151 l~g~~~~~~~g~~t~ggt~An~~al~aa~~~-~p~~~Vl~s~~~H~S~~~~~----~~~G~~v~~v~~~~~g~~D~~~Le 225 (476)
|+|++.++ ..++.++|.+.-.++++.+.. .++++|++++..|++....+ +..|++++.++.+.. |
T Consensus 160 LtG~~~an--aSL~d~aTAaaea~~~a~~~~~g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~~---~----- 229 (993)
T PLN02414 160 LTGLPMSN--ASLLDEGTAAAEAMAMCNNILKGKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKDF---D----- 229 (993)
T ss_pred HhCCChhh--EeecCChHHHHHHHHHHHhcccCCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchhh---c-----
Confidence 99998654 888999988877655554321 23478999999999876444 446999999987421 1
Q ss_pred HHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCcc-cccEEEEc
Q 011842 226 AKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKK-PIGSVSVS 304 (476)
Q Consensus 226 ~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~-~~Dsi~~s 304 (476)
...+. ...++.+-++.+|.+.|+++|+++|+++|+ +++| +++..+..+.. +..+ ++|+++.+
T Consensus 230 ----~~~~~-v~~vlvq~P~~~G~v~dv~~I~~~ah~~Ga-----L~iV-aad~lal~~l~------~pge~GADi~vgs 292 (993)
T PLN02414 230 ----YSSGD-VCGVLVQYPATDGEVLDYAEFVKNAHANGV-----KVVM-ATDLLALTMLK------PPGEWGADIVVGS 292 (993)
T ss_pred ----cccCc-eEEEEEecCCCCeEEcCHHHHHHHHHHcCC-----EEEE-EECHHHhcCCC------CHhhccCcEEEEC
Confidence 11111 233345566789999999999999999999 9999 77754443311 1223 49999999
Q ss_pred CCCCC-----CCCCCceeEEeehhhhhhhcC-CccccCCCC--C--------------cccCCCCChhHHHHHHHH----
Q 011842 305 GHKFV-----GCPMPCGVQITRMEHINVLSS-NVEYLASRD--A--------------TIMGSRNGHAPIFLWYTL---- 358 (476)
Q Consensus 305 ~hK~l-----~~p~~~G~l~~~~~~~~~l~~-~~~yl~~~~--~--------------~~~~sr~~~~~l~~~~~l---- 358 (476)
+|||+ ++|. .|++++++++.+.++. ...+-...+ . .-.++.+.....++++.+
T Consensus 293 gqKwg~P~G~GGP~-aGflavr~~~~r~~PgriVG~s~d~~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y 371 (993)
T PLN02414 293 AQRFGVPMGYGGPH-AAFLATSQEYKRLMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMY 371 (993)
T ss_pred CCccccCCCCCCCC-eeEEEECHHHHhhCCCcccCcccCCCCCcccccccccccchhhhcccccchhHHHHHHHHHHHHH
Confidence 99998 4444 8999999987654431 111100000 0 002233322223333333
Q ss_pred -HHhChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecCCcHHHh-----hceeeccc-CCEEEEEEcCCC
Q 011842 359 -NRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERPQDEEFV-----RRWQLACQ-GNIAHVVVMPNV 431 (476)
Q Consensus 359 -~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~~~~~~-----~~~~l~~~-~~~lRv~~~~~~ 431 (476)
.++|..|++++.+++++++.+++++|++.|+....++...++.|..+.+.++. +++.+... .+.+|++++..+
T Consensus 372 ~~~~g~~Gl~~Ia~ri~~la~~l~~~L~~~G~~~~~~~~f~~vt~~~~~~~~v~~~L~~~gI~l~~~~~~~lrvs~~e~~ 451 (993)
T PLN02414 372 AVYHGPEGLKTIAQRVHGLAGVFAAGLKKLGFQVQSLPFFDTVKVKCSDADAIADAAAKVGINLRVVDANTVTVSFDETT 451 (993)
T ss_pred HHHhccccHHHHHHHHHHHHHHHHHHHhhcCCccCCCCCcCeEEEecCCHHHHHHHHHHCCCeeEEecCCeEEEEeeccC
Confidence 45688999999999999999999999998876555555678888876544333 23333322 467999999999
Q ss_pred CHHHHHHHHHHHHH
Q 011842 432 TIDKLDDFLNELIE 445 (476)
Q Consensus 432 T~edid~~~~~l~~ 445 (476)
|++|||+|+++|..
T Consensus 452 T~edId~L~~~l~~ 465 (993)
T PLN02414 452 TLEDVDKLFKVFAG 465 (993)
T ss_pred CHHHHHHHHHHHcc
Confidence 99999999999964
No 212
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.80 E-value=9.3e-18 Score=171.68 Aligned_cols=209 Identities=15% Similarity=0.114 Sum_probs=152.4
Q ss_pred HHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHH---HHcCCeEEEEeCCCCCc
Q 011842 142 VGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAA---RMYRMECVKVDCLISGE 218 (476)
Q Consensus 142 ~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~---~~~G~~v~~v~~~~~g~ 218 (476)
+++.+.+++++|.+. .++++||+.|+..++.+... ||+.|+++.+.|.+....+ +..|++++.+.
T Consensus 56 ~~lE~~lA~l~g~~~----~l~~~sG~~Ai~~~l~~ll~--~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v~~~~------ 123 (385)
T PRK08574 56 RPLEEALAKLEGGVD----ALAFNSGMAAISTLFFSLLK--AGDRVVLPMEAYGTTLRLLKSLEKFGVKVVLAY------ 123 (385)
T ss_pred HHHHHHHHHHhCCCc----EEEeCCHHHHHHHHHHHHhC--CCCEEEEcCCCchhHHHHHHHhhccCcEEEEEC------
Confidence 345555788888753 78889999999998887755 8999999999999876655 34577777654
Q ss_pred cCHHHHHHHHHc-CCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCccc
Q 011842 219 IDCADFKAKLLQ-NKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKP 297 (476)
Q Consensus 219 ~D~~~Le~~l~~-~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~ 297 (476)
.|+++|++++.+ +++ +|++.+++|++|.+.|+++|+++|+++|+ ++++|++|+.+... +. + ..+
T Consensus 124 ~d~~~l~~~i~~~~tk---lV~ie~p~NPtG~v~dl~~I~~la~~~gi-----~livD~t~a~~~~~--~~---l--~~G 188 (385)
T PRK08574 124 PSTEDIIEAIKEGRTK---LVFIETMTNPTLKVIDVPEVAKAAKELGA-----ILVVDNTFATPLLY--RP---L--RHG 188 (385)
T ss_pred CCHHHHHHhcCccCce---EEEEECCCCCCCEecCHHHHHHHHHHcCC-----EEEEECCCCccccC--Ch---h--hhC
Confidence 268899999876 554 77789999999999999999999999999 99999999754321 00 1 124
Q ss_pred ccEEEEcCCCCCCCCCC--ceeEEeeh-hhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHH
Q 011842 298 IGSVSVSGHKFVGCPMP--CGVQITRM-EHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCL 374 (476)
Q Consensus 298 ~Dsi~~s~hK~l~~p~~--~G~l~~~~-~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~ 374 (476)
+|+++.|++||+++|-. .|++++++ ++.+.+.....++ +.. ..++..|..++ +.+.+..++++..
T Consensus 189 aDivv~S~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~~~~~--------g~~--~~p~~a~l~l~--~l~tL~~R~~~~~ 256 (385)
T PRK08574 189 ADFVVHSLTKYIAGHNDVVGGVAVAWSGEFLEELWEWRRRL--------GTI--MQPFEAYLVLR--GLKTLEVRFERQC 256 (385)
T ss_pred CcEEEeeCceeecCCCCceeEEEEECcHHHHHHHHHHHHhc--------CCC--CCHHHHHHHHc--ccCcHHHHHHHHH
Confidence 89999999999987653 46566654 4444332111111 111 12344454444 4567888999999
Q ss_pred HHHHHHHHHHHhcCC
Q 011842 375 RNAHYLKDRLLDAGI 389 (476)
Q Consensus 375 ~~a~~l~~~L~~~g~ 389 (476)
+++.++.+.|++.+.
T Consensus 257 ~na~~la~~L~~~p~ 271 (385)
T PRK08574 257 RNAMAIAEFLSEHPK 271 (385)
T ss_pred HHHHHHHHHHHcCCC
Confidence 999999999998764
No 213
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.80 E-value=3.1e-18 Score=160.42 Aligned_cols=283 Identities=18% Similarity=0.191 Sum_probs=185.3
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHH---HHHHcCCeEEEEe
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFK---AARMYRMECVKVD 212 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~---~~~~~G~~v~~v~ 212 (476)
....||++ .|+++|-+. |.|+++||++|++++++-+.+ |+.+||+.+.+|.-..+ .+.+.|+.++.+.
T Consensus 57 tt~rLE~~----vA~l~GKEA----gLFv~SGTmgNllaIm~Hc~~-rg~eii~gd~~HI~~~E~gg~s~l~gv~~~tv~ 127 (384)
T KOG1368|consen 57 TTNRLEQR----VAELFGKEA----GLFVPSGTMGNLLAIMVHCHQ-RGSEIIVGDRAHIHRYEQGGISQLAGVHVRTVK 127 (384)
T ss_pred cHHHHHHH----HHHHhCccc----eeeecccccccHHHHHHHhcC-CCceEEeccchheeehhccChhhhccceeEeee
Confidence 45677776 566777765 899999999999999998874 88999999999965443 3455688899998
Q ss_pred CCCCCccCHHHHHHHHHcCC-C--Cc--EEEEEeeCCCccc-cccCH---HHHHHHHHHhCCCCCceEEEEecCc--ccc
Q 011842 213 CLISGEIDCADFKAKLLQNK-D--KP--AIINVNIGTTVKG-AVDDL---DLVIQTLEESGFTQDRFYIHCDGAL--FGL 281 (476)
Q Consensus 213 ~~~~g~~D~~~Le~~l~~~~-~--~p--~~vv~t~gtt~tG-~id~l---~~I~~ia~~~g~~~~~~~lhvD~a~--~g~ 281 (476)
..++|.||++++|+++.... + .| .+|++.+-.+.+| .+-|| ++|.++|++||+ -+|+|||- .+.
T Consensus 128 ~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v~~lak~~gl-----kLH~DGARi~NAa 202 (384)
T KOG1368|consen 128 NENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRVKALAKRHGL-----KLHMDGARIFNAA 202 (384)
T ss_pred eCCCCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHHHHHHHHhccCC-----eeecchhhhhhHH
Confidence 88899999999999998432 1 12 3666665555566 66665 567789999999 99999994 222
Q ss_pred cccccccCCCCCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHh
Q 011842 282 MMPFVKKAPKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRK 361 (476)
Q Consensus 282 ~~~~~~~~~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~ 361 (476)
+... .. .-.....+||+++.+.|.+++|.|+ +++.+.++++... ++. ..+.|+-+.. .+-..+++-++
T Consensus 203 vasg-V~--vk~i~~~fDSVsiCLSKglgAPVGS-ViVG~k~FI~kA~----~~R---KalGGGmRQs-GvLaaaaLval 270 (384)
T KOG1368|consen 203 VASG-VP--VKKICSAFDSVSICLSKGLGAPVGS-VIVGSKDFIDKAR----HFR---KALGGGMRQS-GVLAAAALVAL 270 (384)
T ss_pred HHcC-CC--HHHHHHhhhhhhhhhhccCCCCccc-EEEccHHHHHHHH----HHH---HHhcCchhHH-HHHHHHHHHHh
Confidence 2111 00 0111233899999999999998753 4445555543221 110 1223322211 12222333333
Q ss_pred ChhcHHHHHHHHHHHHHHHHHHHHhcCCeEe-ec-CCeeEEEEec--C--CcHHHhhce---e--e-cccCCEEEEEEcC
Q 011842 362 GYKGFQKEVQKCLRNAHYLKDRLLDAGISAM-LN-ELSSTVVFER--P--QDEEFVRRW---Q--L-ACQGNIAHVVVMP 429 (476)
Q Consensus 362 g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~-~~-~~~~iv~f~~--~--~~~~~~~~~---~--l-~~~~~~lRv~~~~ 429 (476)
. +.+. .+++.+++|+.+.+.++..+...+ .+ -.+|++.+.. + ..+++.+.+ . + .....++|++++.
T Consensus 271 ~-~~~~-~L~~dHk~A~~lAe~~~~~~~i~v~v~a~etNiv~~~l~q~~~~~~~l~~~~~k~gi~lm~~~s~r~Rivlh~ 348 (384)
T KOG1368|consen 271 D-ENVP-LLRADHKRAKELAEYINTPEEIRVEVPAVETNIVNMVLCQARLTAEELCKFLEKNGILLMGGASRRIRIVLHH 348 (384)
T ss_pred h-cchH-HHHHHHHHHHHHHHHhccccceeeecchhhcceeeeecccccCCHHHHHHHHHHCCeEEeeccccceEEEEEE
Confidence 2 2333 667778888888888888773333 33 4578877543 2 233443322 1 1 2234568999999
Q ss_pred CCCHHHHHHHHHHHHHH
Q 011842 430 NVTIDKLDDFLNELIEN 446 (476)
Q Consensus 430 ~~T~edid~~~~~l~~~ 446 (476)
.+|.++++.++..+.+.
T Consensus 349 Qvt~~~ve~~~~~~~k~ 365 (384)
T KOG1368|consen 349 QVTDEDVEYVKSVLSKK 365 (384)
T ss_pred ecCHHHHHHHHHHHHHH
Confidence 99999999999999643
No 214
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.80 E-value=1.6e-17 Score=169.12 Aligned_cols=226 Identities=14% Similarity=0.144 Sum_probs=163.3
Q ss_pred HHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHH----HHHHHHcCCeEEEEeCCCC
Q 011842 141 EVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSV----FKAARMYRMECVKVDCLIS 216 (476)
Q Consensus 141 e~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~----~~~~~~~G~~v~~v~~~~~ 216 (476)
..++.+.++++.|.+. .++++||+.|+..++ .+.. +|+.|+++.+.|.+. ...++..|++++.++..
T Consensus 54 ~~~le~~la~l~g~~~----~~~~~sG~~ai~~~~-~ll~--~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~-- 124 (366)
T PRK08247 54 RGVLEQAIADLEGGDQ----GFACSSGMAAIQLVM-SLFR--SGDELIVSSDLYGGTYRLFEEHWKKWNVRFVYVNTA-- 124 (366)
T ss_pred HHHHHHHHHHHhCCCc----EEEEcCHHHHHHHHH-HHhC--CCCEEEEecCCcCcHHHHHHHHhhccCceEEEECCC--
Confidence 4456666888899864 688999998887654 3443 899999999988753 44556689999988864
Q ss_pred CccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCcc
Q 011842 217 GEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKK 296 (476)
Q Consensus 217 g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~ 296 (476)
|+++|++++.++++ +|++++++|++|.+.++++|+++|++||+ ++++|++|+..+... + + ..
T Consensus 125 ---d~~~l~~~i~~~tk---lv~le~P~NP~~~~~dl~~I~~la~~~g~-----~lIvD~t~~~~~~~~----p-~--~~ 186 (366)
T PRK08247 125 ---SLKAIEQAITPNTK---AIFIETPTNPLMQETDIAAIAKIAKKHGL-----LLIVDNTFYTPVLQR----P-L--EE 186 (366)
T ss_pred ---CHHHHHHhcccCce---EEEEECCCCCCCcHHHHHHHHHHHHHcCC-----EEEEECCCccccccC----c-h--hc
Confidence 89999999977665 88888999999999999999999999999 999999996543311 1 1 12
Q ss_pred cccEEEEcCCCCCCCCC--CceeEEeeh-hhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHH
Q 011842 297 PIGSVSVSGHKFVGCPM--PCGVQITRM-EHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKC 373 (476)
Q Consensus 297 ~~Dsi~~s~hK~l~~p~--~~G~l~~~~-~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~ 373 (476)
.+|+++.|++|+++++. ..|+++.++ ++.+.+.....+. +.. ..++.+|..++ +.+.+..++++.
T Consensus 187 g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~~~~~~~~~~~--------g~~--~s~~~a~l~~~--~l~tl~~r~~~~ 254 (366)
T PRK08247 187 GADIVIHSATKYLGGHNDVLAGLVVAKGQELCERLAYYQNAA--------GAV--LSPFDSWLLIR--GMKTLALRMRQH 254 (366)
T ss_pred CCcEEEeecceeccCCCceeeeEEecChHHHHHHHHHHHHhc--------CCC--CChHHHHHHHh--ccCcHHHHHHHH
Confidence 48999999999998643 468777764 3444332111121 111 12355666655 345677888888
Q ss_pred HHHHHHHHHHHHhcCC-eEeecC-CeeEEEEecC
Q 011842 374 LRNAHYLKDRLLDAGI-SAMLNE-LSSTVVFERP 405 (476)
Q Consensus 374 ~~~a~~l~~~L~~~g~-~~~~~~-~~~iv~f~~~ 405 (476)
.++++.+.+.|++.+. ..+..| ...+++|...
T Consensus 255 ~~~a~~l~~~L~~~p~v~~v~~P~~gg~~sf~~~ 288 (366)
T PRK08247 255 EENAKAIAAFLNEQPGVTDVLYPGRGGMLSFRLQ 288 (366)
T ss_pred HHHHHHHHHHHHhCCCeeEEecCCcCcEEEEEEC
Confidence 9999999999999754 334344 5677778754
No 215
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.80 E-value=1.8e-17 Score=170.49 Aligned_cols=211 Identities=14% Similarity=0.110 Sum_probs=157.5
Q ss_pred HHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCc----hHHHHHHHHcCCeEEEEeCCCC
Q 011842 141 EVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESH----YSVFKAARMYRMECVKVDCLIS 216 (476)
Q Consensus 141 e~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H----~S~~~~~~~~G~~v~~v~~~~~ 216 (476)
.+++.+.++++.|.+. .+++++|+.|+..++.+... +|+.|+++...| ..+...++..|++++.++.+
T Consensus 72 ~~~le~~lA~l~g~~~----al~~~sG~~Ai~~~l~all~--~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~~v~~vd~~-- 143 (403)
T PRK07810 72 VSMFEERLRLIEGAEA----CFATASGMSAVFTALGALLG--AGDRLVAARSLFGSCFVVCNEILPRWGVETVFVDGE-- 143 (403)
T ss_pred HHHHHHHHHHHhCCCc----EEEECChHHHHHHHHHHHhC--CCCEEEEccCCcchHHHHHHHHHHHcCcEEEEECCC--
Confidence 3345556788888763 89999999999988877655 899999988665 23345667789999999864
Q ss_pred CccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCcc
Q 011842 217 GEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKK 296 (476)
Q Consensus 217 g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~ 296 (476)
|+++++++|.++++ +|+++++++++|.+.|+++|+++|+++|+ ++++|++|+.+.... . + ..
T Consensus 144 ---d~~~l~~ai~~~tk---lV~~esp~Nptg~v~dl~~I~~la~~~g~-----~vivD~a~a~~~~~~--~---~--~~ 205 (403)
T PRK07810 144 ---DLSQWEEALSVPTQ---AVFFETPSNPMQSLVDIAAVSELAHAAGA-----KVVLDNVFATPLLQR--G---L--PL 205 (403)
T ss_pred ---CHHHHHHhcCcCce---EEEEECCCCCCCeecCHHHHHHHHHHcCC-----EEEEECCCCccccCC--h---h--hc
Confidence 89999999987765 88889999999999999999999999999 999999997554321 0 1 12
Q ss_pred cccEEEEcCCCCCCCC-CC-ceeEEeehhhhh-hhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHH
Q 011842 297 PIGSVSVSGHKFVGCP-MP-CGVQITRMEHIN-VLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKC 373 (476)
Q Consensus 297 ~~Dsi~~s~hK~l~~p-~~-~G~l~~~~~~~~-~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~ 373 (476)
++|+++.|++|++++. .. .|+++.+++.+. .+. .+... .+.. ..++.+|..++ +.+.+..++++.
T Consensus 206 gaDivv~S~tK~l~g~g~~~gG~v~~~~~~~~~~l~---~~~~~-----~g~~--~s~~~a~l~l~--~L~tl~~R~~~~ 273 (403)
T PRK07810 206 GADVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQ---KLMRH-----TGPA--LSAFNAWVLLK--GLETLALRVRHS 273 (403)
T ss_pred CCcEEEccCCceecCCcCceeEEEEeChHHHHHHHH---HHHHH-----hCCC--CCHHHHHHHHh--ccCcHHHHHHHH
Confidence 4899999999999753 23 477777766443 221 11110 1111 23566666555 457789999999
Q ss_pred HHHHHHHHHHHHhcCC
Q 011842 374 LRNAHYLKDRLLDAGI 389 (476)
Q Consensus 374 ~~~a~~l~~~L~~~g~ 389 (476)
.+++.++.+.|++.+.
T Consensus 274 ~~~a~~~a~~L~~~p~ 289 (403)
T PRK07810 274 NASALRIAEFLEGHPA 289 (403)
T ss_pred HHHHHHHHHHHhcCCC
Confidence 9999999999998764
No 216
>PLN02672 methionine S-methyltransferase
Probab=99.80 E-value=6.7e-17 Score=179.65 Aligned_cols=288 Identities=11% Similarity=0.104 Sum_probs=193.5
Q ss_pred HHHHHHHHHHHHHHcCCCCCc-ccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCC-
Q 011842 138 RQFEVGVLDWFARLWELENNE-YWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLI- 215 (476)
Q Consensus 138 ~~le~~~~~~la~l~g~~~~~-~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~- 215 (476)
.++.+++++|+++.+|++.+. .++++|+|+++++..++.+..+ ||+.|+++.++|+.+...+++.|++++.+|+++
T Consensus 733 pdlr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~elL~lll~aLl~--pGD~VLVp~PtY~~Y~~~a~~~Ga~vv~Vpl~~e 810 (1082)
T PLN02672 733 TDPRPSILQFIKSNYGFPTDSCTEFVYGDTSLALFNKLVLCCVQ--EGGTLCFPAGSNGTYVSAAKFLKANFRRIPTKSS 810 (1082)
T ss_pred hHHHHHHHHHHHHHhCcCCCCCCEEEEeCCHHHHHHHHHHHHcC--CCCEEEEeCCChHHHHHHHHHcCCEEEEEecccc
Confidence 467889999999999998642 3578888888777777777766 999999999999999999999999999999963
Q ss_pred -CCccCHHHHHHHHHcCCCCcEEEEEeeCC-Ccccccc---CHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCC
Q 011842 216 -SGEIDCADFKAKLLQNKDKPAIINVNIGT-TVKGAVD---DLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAP 290 (476)
Q Consensus 216 -~g~~D~~~Le~~l~~~~~~p~~vv~t~gt-t~tG~id---~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~ 290 (476)
++.+|++.|++++.+.+. + +|++++|+ ||||.+- .+++|+++|++||+ +|++|++|+...+......
T Consensus 811 ~gf~lD~d~Le~al~~~~~-~-~I~L~nPnhNPTG~v~S~eeLe~Llela~k~di-----~VIsDEaYsdL~Fd~~~~s- 882 (1082)
T PLN02672 811 DGFKLTAKTLASTLETVKK-P-WVYISGPTINPTGLLYSNSEIEEILSVCAKYGA-----RVIIDTSFSGLEYDTSGWG- 882 (1082)
T ss_pred cCCCCCHHHHHHHhccCCC-C-EEEEECcCCCCcCccCCHHHHHHHHHHHHHcCC-----EEEEeCCCCccccCCCCCc-
Confidence 467899999999865322 1 56677786 9999984 57888899999999 9999999986655321110
Q ss_pred CCCCc----------c--cccEEEEcCCCCCCCCCCceeEEeehh-hhhhhcCCccccCCCCCcccCCCCChhHHHHHHH
Q 011842 291 KVSFK----------K--PIGSVSVSGHKFVGCPMPCGVQITRME-HINVLSSNVEYLASRDATIMGSRNGHAPIFLWYT 357 (476)
Q Consensus 291 ~~~~~----------~--~~Dsi~~s~hK~l~~p~~~G~l~~~~~-~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~ 357 (476)
..+.. . .+-++..-++||+++++++||++++++ +++.+.....+.. ......+.+.++
T Consensus 883 ~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGLRIGylIap~~eLi~~l~~~~~~s~---------~~~~~q~Aaaaa 953 (1082)
T PLN02672 883 GWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGHEFGFLALNDSVLIDAFHSAPGLSR---------PHSTLKYTIKKL 953 (1082)
T ss_pred ccchhhHHHHhccccCCceEEEEeCcHHhhccHHHHheeEEeCCHHHHHHHHHhhhhcC---------CCcHHHHHHHHH
Confidence 00110 0 122222334579999999999999765 6665532211110 000112333333
Q ss_pred HHHhC------hhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecC---------------------CcHHH
Q 011842 358 LNRKG------YKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERP---------------------QDEEF 410 (476)
Q Consensus 358 l~~~g------~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~---------------------~~~~~ 410 (476)
+..+. .+.+++..+.+.++++++.+.|++.|+. +.+|..+++.|..+ ++.++
T Consensus 954 lall~~~~~~~~~~l~e~r~~Lk~rRd~L~e~L~~~Gi~-v~~PeGGFfLwl~l~~~l~~~~~~~~~~~~~~~~lds~ef 1032 (1082)
T PLN02672 954 LGLKNQKSSDLLDGVAEQKKILKSRAERLKETLEACGWD-VLEPQGGISMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNI 1032 (1082)
T ss_pred HHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHCCCe-EecCCcEEEEEEEccccccccccccccccccccCCCHHHH
Confidence 32221 1234556667788999999999998875 44555555444321 11222
Q ss_pred ----hhc--eeecc-----cCCEEEEEEcCCCCHHHHHHHHHHHHHHH
Q 011842 411 ----VRR--WQLAC-----QGNIAHVVVMPNVTIDKLDDFLNELIENR 447 (476)
Q Consensus 411 ----~~~--~~l~~-----~~~~lRv~~~~~~T~edid~~~~~l~~~~ 447 (476)
.++ ..+.. ..+++|+++. .++++++..++.|++..
T Consensus 1033 ae~LLee~GVaV~PGs~FG~~g~~RIsfa--~~~e~LeeALerL~kf~ 1078 (1082)
T PLN02672 1033 REAILKSTGLCINSSSWTGIPGYCRFSFA--LEDSEFDRALKAIARFK 1078 (1082)
T ss_pred HHHHHHcCCEEEecCcccCCCCeEEEEec--CCHHHHHHHHHHHHHHH
Confidence 222 22221 1368999886 47889999999988754
No 217
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.80 E-value=1.6e-17 Score=170.44 Aligned_cols=269 Identities=15% Similarity=0.141 Sum_probs=187.6
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHH----HHHHHHcCCeEEEEeCC
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSV----FKAARMYRMECVKVDCL 214 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~----~~~~~~~G~~v~~v~~~ 214 (476)
...+++.+.++++.|.+. .+++++|+.|+..++. ... +|+.|+++++.|.+. ...++..|++++.++.+
T Consensus 54 p~~~~le~~lA~l~g~~~----~v~~~sG~~ai~~~l~-~l~--~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~ 126 (390)
T PRK08064 54 PTREALEDIIAELEGGTK----GFAFASGMAAISTAFL-LLS--KGDHVLISEDVYGGTYRMITEVLSRFGIEHTFVDMT 126 (390)
T ss_pred hhHHHHHHHHHHHhCCCC----eEEECCHHHHHHHHHH-HhC--CCCEEEEccCccchHHHHHHHHHHHcCCEEEEECCC
Confidence 334455666888888763 5677788888776664 333 899999999988643 35566789999999874
Q ss_pred CCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCC
Q 011842 215 ISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSF 294 (476)
Q Consensus 215 ~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~ 294 (476)
|++++++++.++++ +|++++++|++|.+.|+++|.++|+++|+ ++++|++|+.+.... + +
T Consensus 127 -----d~~~l~~~l~~~tk---lV~l~~p~NptG~~~dl~~I~~la~~~g~-----~vvvD~a~~~~~~~~----~-~-- 186 (390)
T PRK08064 127 -----NLEEVAQNIKPNTK---LFYVETPSNPLLKVTDIRGVVKLAKAIGC-----LTFVDNTFLTPLLQK----P-L-- 186 (390)
T ss_pred -----CHHHHHHhcCCCce---EEEEECCCCCCcEeccHHHHHHHHHHcCC-----EEEEECCCCcccccC----c-h--
Confidence 78999999977665 88899999999999999999999999999 999999987543320 0 1
Q ss_pred cccccEEEEcCCCCCCCCCC--ceeEEeeh-hhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHH
Q 011842 295 KKPIGSVSVSGHKFVGCPMP--CGVQITRM-EHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQ 371 (476)
Q Consensus 295 ~~~~Dsi~~s~hK~l~~p~~--~G~l~~~~-~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~ 371 (476)
..++|+++.|+|||++++.+ .|++++++ ++.+.+....... ... ..+...|..+ .|.+.+..+++
T Consensus 187 ~~g~Divv~S~tK~~~G~~~~laG~~v~~~~~~~~~l~~~~~~~-------g~~---~~~~~a~l~~--~gl~tl~~R~~ 254 (390)
T PRK08064 187 DLGADVVLHSATKFLAGHSDVLAGLAVVKDEELAQKLYFLQNSF-------GAV---LGVQDCWLVL--RGLKTLHVRLE 254 (390)
T ss_pred hhCCcEEEeecceeccCCccceeEEEEeCCHHHHHHHHHHHHhc-------CCC---CCHHHHHHHH--cccCcHHHHHH
Confidence 12489999999999987776 58888775 4544442111110 111 1234455433 45566788999
Q ss_pred HHHHHHHHHHHHHHhcCCe-Ee-ec-----C-----------CeeEEEEecCCcH---HHhhceeec-------------
Q 011842 372 KCLRNAHYLKDRLLDAGIS-AM-LN-----E-----------LSSTVVFERPQDE---EFVRRWQLA------------- 417 (476)
Q Consensus 372 ~~~~~a~~l~~~L~~~g~~-~~-~~-----~-----------~~~iv~f~~~~~~---~~~~~~~l~------------- 417 (476)
+..+++..+.+.|++.+.. .+ .+ | ...+++|...+.+ .|.+.+.+.
T Consensus 255 ~~~~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~~~~~~~~f~~~l~l~~~~~s~G~~~sl~ 334 (390)
T PRK08064 255 HSSETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQSEEAVRQFVSHVKLPVFAVSLGAVESIL 334 (390)
T ss_pred HHHHHHHHHHHHHhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEECCHHHHHHHHHhCCcceEcccCCCCccee
Confidence 9999999999999987632 12 11 1 1357888775321 233333320
Q ss_pred --------------------ccCCEEEEEEcCCCCHHHHHHHHHHHHHH
Q 011842 418 --------------------CQGNIAHVVVMPNVTIDKLDDFLNELIEN 446 (476)
Q Consensus 418 --------------------~~~~~lRv~~~~~~T~edid~~~~~l~~~ 446 (476)
...+.+|+|+....+++.|+.|.++|+++
T Consensus 335 ~~~~~~~h~~~~~~~~~~~gi~~~liR~SvGle~~~dli~dl~~Al~~~ 383 (390)
T PRK08064 335 SYPAKMSHAAMPKEERDERGITDGLLRLSVGLENVDDLIADFEQALSYV 383 (390)
T ss_pred ECCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHhc
Confidence 01257899999888888888888888753
No 218
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.80 E-value=4.7e-18 Score=172.10 Aligned_cols=228 Identities=14% Similarity=0.102 Sum_probs=155.6
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCC-CC-
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCL-IS- 216 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~-~~- 216 (476)
..-.+..+.+|+++|.+.. -++|+|+|.+|..++.++.. ||+.|++++..|-|+..++.+.|+.+++++.. +.
T Consensus 66 G~I~eAe~~aA~~fGAd~t---~flvnGsT~g~~a~i~a~~~--~gd~VLv~RN~HkSv~~alil~ga~Pvyi~p~~~~~ 140 (417)
T PF01276_consen 66 GIIKEAEELAARAFGADKT---FFLVNGSTSGNQAMIMALCR--PGDKVLVDRNCHKSVYNALILSGAIPVYIPPEDNEY 140 (417)
T ss_dssp THHHHHHHHHHHHHTESEE---EEESSHHHHHHHHHHHHHTT--TTCEEEEETT--HHHHHHHHHHTEEEEEEEEEE-TT
T ss_pred cHHHHHHHHHHHhcCCCeE---EEEecCchHHHHHHHHHhcC--CCCEEEEcCCcHHHHHHHHHHcCCeEEEecCCcccc
Confidence 4556777889999999853 67788999999999999887 99999999999999999999999999988764 21
Q ss_pred ---CccCH-----HHHHHHHHcCCC--CcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCccccccccc
Q 011842 217 ---GEIDC-----ADFKAKLLQNKD--KPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFV 286 (476)
Q Consensus 217 ---g~~D~-----~~Le~~l~~~~~--~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~ 286 (476)
+.+++ +.++++|+++.. .+.+|++|++ |+.|.+.|+++|+++|+++++ .|+||+|||+......
T Consensus 141 gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~P-TY~Gv~~di~~I~~~~h~~~~-----~llvDEAhGah~~F~~ 214 (417)
T PF01276_consen 141 GIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSP-TYYGVCYDIKEIAEICHKHGI-----PLLVDEAHGAHFGFHP 214 (417)
T ss_dssp S-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS--TTSEEE-HHHHHHHHCCTEC-----EEEEE-TT-TTGGCSG
T ss_pred CCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCC-CCCeEEECHHHHHHHhcccCC-----EEEEEccccccccCCC
Confidence 34666 999999998753 2456777755 578999999999999999999 9999999987654321
Q ss_pred ccCCCCCCccccc-------EEEEcCCCCCCCCCCceeEEeehhh-h--hhhcCCccccCCCCCcccCCCCChhH-HHHH
Q 011842 287 KKAPKVSFKKPIG-------SVSVSGHKFVGCPMPCGVQITRMEH-I--NVLSSNVEYLASRDATIMGSRNGHAP-IFLW 355 (476)
Q Consensus 287 ~~~~~~~~~~~~D-------si~~s~hK~l~~p~~~G~l~~~~~~-~--~~l~~~~~yl~~~~~~~~~sr~~~~~-l~~~ 355 (476)
-+. -....++| .++-|.||.+.+-..++++.+++.. + +.+......+.++ -+.-.. .++-
T Consensus 215 lp~--~a~~~gad~~~~~~~~vvqS~HKtL~altQts~lh~~~~~~v~~~~~~~~l~~~~TT-------SPSY~lmASlD 285 (417)
T PF01276_consen 215 LPR--SALALGADRPNDPGIIVVQSTHKTLPALTQTSMLHVKGDRIVDHERVNEALSMHQTT-------SPSYPLMASLD 285 (417)
T ss_dssp GGT--TCSSTTSS-CTSBEEEEEEEHHHHSSS-TT-EEEEEETCCCTTHHHHHHHHHHHS-S-------S--HHHHHHHH
T ss_pred Ccc--chhhccCccccccceeeeechhhcccccccceEEEecCCCcccHHHHHHHHHHHcCC-------ChHHHHHHHHH
Confidence 111 12223367 9999999999999999999999864 2 2222111111111 111111 1122
Q ss_pred HHHHHhChhcHHHHHHHHHHHHHHHHHHHHh
Q 011842 356 YTLNRKGYKGFQKEVQKCLRNAHYLKDRLLD 386 (476)
Q Consensus 356 ~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~ 386 (476)
.+.+.+....-++.+++..++++.|+++|++
T Consensus 286 ~a~~~m~~~~G~~l~~~~i~~a~~~R~~i~~ 316 (417)
T PF01276_consen 286 VARAQMEEEEGRELLEEAIELAEEFRKKINR 316 (417)
T ss_dssp HHHHHHSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHh
Confidence 2223331223367788888999999999943
No 219
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.80 E-value=7.5e-17 Score=163.81 Aligned_cols=273 Identities=12% Similarity=0.043 Sum_probs=183.5
Q ss_pred hHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCC-
Q 011842 137 SRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLI- 215 (476)
Q Consensus 137 ~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~- 215 (476)
..++++++ ++.++++++ ++++|+|+++++..++.+..+ ||+.|++++++|..+...++..|++++.++++.
T Consensus 67 ~~~lr~~i----a~~~~~~~~--~I~it~G~~~al~~~~~~~~~--~gd~V~v~~P~y~~~~~~~~~~g~~~~~~~l~~~ 138 (357)
T PRK14809 67 HADLTAAL----ADRWDVSPE--QVWLANGGDGALDYLARAMLD--PGDTVLVPDPGFAYYGMSARYHHGEVREYPVSKA 138 (357)
T ss_pred HHHHHHHH----HHHhCCCcc--eEEECCCHHHHHHHHHHHhcC--CCCEEEEeCCChHHHHHHHHHcCCeEEEEecccC
Confidence 34555555 445577654 599999999999888877765 999999999999888888889999999998853
Q ss_pred -CCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHh--CCCCCceEEEEecCcccccccccccCCCC
Q 011842 216 -SGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEES--GFTQDRFYIHCDGALFGLMMPFVKKAPKV 292 (476)
Q Consensus 216 -~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~--g~~~~~~~lhvD~a~~g~~~~~~~~~~~~ 292 (476)
+..+|.+++++.+. +++ +|++++++|+||.+-+.+++.++++.+ +. +|++|++|+.+.... .....+
T Consensus 139 ~~~~~~~~~~~~~~~-~~k---~i~l~~p~NPTG~~~s~~~~~~l~~~~~~~~-----~iI~De~y~~~~~~~-~~~~~~ 208 (357)
T PRK14809 139 DDFEQTADTVLDAYD-GER---IVYLTSPHNPTGSEIPLDEVEALAERTDEET-----LVVVDEAYGEFAERP-SAVALV 208 (357)
T ss_pred cCCCcCHHHHHHhhc-CCc---EEEEeCCCCCCCcCCCHHHHHHHHHhCccCc-----EEEEechhhhccCCc-hhHHHH
Confidence 35678888777652 333 777889999999999988888887764 67 999999998654321 111111
Q ss_pred CCcccccEEEEcCCCCCC-CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChh-cHHHHH
Q 011842 293 SFKKPIGSVSVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYK-GFQKEV 370 (476)
Q Consensus 293 ~~~~~~Dsi~~s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~-g~~~~~ 370 (476)
+..++ -++..|+.|.++ +++++|++++++++++.+...... .. ...+.+++++..+... -+++..
T Consensus 209 ~~~~~-vi~~~SfSK~~~~~GlRiG~~~~~~~~~~~~~~~~~~-------~~-----~~~~~~~~a~~~l~~~~~~~~~~ 275 (357)
T PRK14809 209 EERDD-VAVLRTFSKAYGLAGLRLGYAVVPEEWADAYARVNTP-------FA-----ASELACRAGLAALDDDEHVERTV 275 (357)
T ss_pred hhCCC-EEEEecchhHhcCcchhheeeecCHHHHHHHHHhCCC-------CC-----CCHHHHHHHHHHhCCHHHHHHHH
Confidence 11111 245568889885 789999999998877665332111 11 1234555555555332 245556
Q ss_pred HHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecCCcHHHhh-----ceeec-c----cCCEEEEEEcCCCCHHHHHHHH
Q 011842 371 QKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERPQDEEFVR-----RWQLA-C----QGNIAHVVVMPNVTIDKLDDFL 440 (476)
Q Consensus 371 ~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~~~~~~~-----~~~l~-~----~~~~lRv~~~~~~T~edid~~~ 440 (476)
+...++++++.+.|.... .++.++.+.+..++..++.+ +..+. . ..+++|+++. +.++++.++
T Consensus 276 ~~~~~~r~~l~~~L~~~~----~~~~g~f~~~~~~~~~~~~~~l~~~gv~v~~g~~f~~~~~iRls~~---~~~~~~~~l 348 (357)
T PRK14809 276 ETARWAREYIREELDAPT----WESAGNFVLAEVGDASAVAEAAQERGVIVRDCTSFGLPECIRITCG---TREETERAV 348 (357)
T ss_pred HHHHHHHHHHHHHhcCcc----CCCCCCEEEEECCCHHHHHHHHHHCCEEEEECccCCCCCeEEEecC---CHHHHHHHH
Confidence 666677777877776532 24556666666654443332 22222 1 1368999864 578999999
Q ss_pred HHHHHHH
Q 011842 441 NELIENR 447 (476)
Q Consensus 441 ~~l~~~~ 447 (476)
++|+++.
T Consensus 349 ~~L~~~l 355 (357)
T PRK14809 349 EVLNEVL 355 (357)
T ss_pred HHHHHHh
Confidence 9997754
No 220
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.80 E-value=3.9e-17 Score=167.12 Aligned_cols=283 Identities=13% Similarity=0.074 Sum_probs=185.5
Q ss_pred hHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHH-HhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCC
Q 011842 137 SRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVG-REVFPDGILYASRESHYSVFKAARMYRMECVKVDCLI 215 (476)
Q Consensus 137 ~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa-~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~ 215 (476)
..++|++ +++++|.+. .++|+|||+|+.+++.+. .. ||++|+++.++|.+...++...|++++.++++.
T Consensus 35 ~~~le~~----la~~~g~~~----~v~~~sgt~al~lal~al~~~--~Gd~Viv~~~~~~~~~~~~~~~G~~~v~vd~~~ 104 (379)
T PRK11658 35 NQALEQA----FCQLTGNQH----AIAVSSATAGMHITLMALGIG--PGDEVITPSLTWVSTLNMIVLLGATPVMVDVDR 104 (379)
T ss_pred HHHHHHH----HHHHhCCCe----EEEECCHHHHHHHHHHHcCCC--CCCEEEECCCcHHHHHHHHHHcCCEEEEEecCC
Confidence 4455555 667778753 788999999999988876 34 899999999999999999999999999999975
Q ss_pred C-CccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCC
Q 011842 216 S-GEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSF 294 (476)
Q Consensus 216 ~-g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~ 294 (476)
+ +.+|+++|++++.++++ +|++++ ++|...|+++|.++|++||+ ++++|++|+.+.....+.. +
T Consensus 105 ~~~~~d~~~l~~~i~~~tk---av~~~~---~~G~~~d~~~i~~~a~~~gi-----~vi~D~a~a~g~~~~~~~~----g 169 (379)
T PRK11658 105 DTLMVTPEAIEAAITPRTK---AIIPVH---YAGAPADLDAIRAIGERYGI-----PVIEDAAHAVGTYYKGRHI----G 169 (379)
T ss_pred CcCCcCHHHHHHhcccCCe---EEEEeC---CCCCcCCHHHHHHHHHHcCC-----eEEEECCCccCCeECCeec----C
Confidence 4 56999999999977664 565544 47999999999999999999 9999999985433222111 1
Q ss_pred cccccEEEEcCCCCCCCCCCceeEEeehh-hhhhhcC---CccccC-------CCCCc----ccCCCCChhHHHHHHHHH
Q 011842 295 KKPIGSVSVSGHKFVGCPMPCGVQITRME-HINVLSS---NVEYLA-------SRDAT----IMGSRNGHAPIFLWYTLN 359 (476)
Q Consensus 295 ~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~-~~~~l~~---~~~yl~-------~~~~~----~~~sr~~~~~l~~~~~l~ 359 (476)
...+++++++.+|.+.+ +..|+++++++ +.+.+.. .-.+.. ..... ..|... ....+-+++.
T Consensus 170 ~~g~~~~Sf~~~K~l~~-g~GG~v~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~G~n~--~~~~l~AAl~ 246 (379)
T PRK11658 170 ARGTAIFSFHAIKNITC-AEGGLVVTDDDELADRLRSLKFHGLGVDAFDRQTQGRAPQAEVLTPGYKY--NLADINAAIA 246 (379)
T ss_pred CCCCEEEeCCCCCcCcc-cCceEEEECCHHHHHHHHHHHHcCCCcchhhhhcccCCCcceeecccccc--CcCHHHHHHH
Confidence 12357888889999876 45666776543 4332211 000100 00000 011111 1123344555
Q ss_pred HhChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCC-----e-eEEEEecCC------cHHHhhce---eecc------
Q 011842 360 RKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNEL-----S-STVVFERPQ------DEEFVRRW---QLAC------ 418 (476)
Q Consensus 360 ~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~-----~-~iv~f~~~~------~~~~~~~~---~l~~------ 418 (476)
....+++++..++.+++++++.+.|++.++..+..+. + .++++..+. .+++.+.+ .+.+
T Consensus 247 ~~ql~~l~~~~~~r~~~a~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~gI~~~~~~~~ 326 (379)
T PRK11658 247 LVQLAKLEALNARRREIAARYLQALADLPFQPLSLPAWPHQHAWHLFIIRVDEERCGISRDALMEALKERGIGTGLHFRA 326 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCcCCCCCCceeEEEEEEEECCccccCCHHHHHHHHHHCCCCCcccCcC
Confidence 5556788999999999999999999887654332211 1 233444321 12222111 1100
Q ss_pred ------------c----------CCEEEEEEcCCCCHHHHHHHHHHHHHHH
Q 011842 419 ------------Q----------GNIAHVVVMPNVTIDKLDDFLNELIENR 447 (476)
Q Consensus 419 ------------~----------~~~lRv~~~~~~T~edid~~~~~l~~~~ 447 (476)
. ...+.+-++++.|.+|++++++.|+++.
T Consensus 327 ~~~~~~~~~~~~~~~~p~~~~~~~~~l~lP~~~~l~~~~~~~i~~~i~~~~ 377 (379)
T PRK11658 327 AHTQKYYRERFPTLSLPNTEWNSERICSLPLFPDMTDADVDRVITALQQIA 377 (379)
T ss_pred cccChhhhccCCCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHHH
Confidence 0 1233444588889999999999998864
No 221
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.79 E-value=9.6e-17 Score=166.42 Aligned_cols=330 Identities=10% Similarity=-0.071 Sum_probs=200.3
Q ss_pred cCCCCcCCcchHHHHHHHHHhhCCCC--CCcccCccchhhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHH
Q 011842 100 LGYPYNLDFDYGALAQLQHFSINNLG--DPFIESNYGVHSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILV 177 (476)
Q Consensus 100 ~g~p~~~~~~~~~l~~~l~~~~n~~g--~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~a 177 (476)
.|.|....++...+.+++...++... .....++...+..++++++.+|+.+..|.+.++.++++|+|+++++..++.+
T Consensus 37 ~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~~~I~it~Ga~~al~~~~~~ 116 (416)
T PRK09440 37 GGNPAHIPEMEDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNISPQNIALTNGSQSAFFYLFNL 116 (416)
T ss_pred CCCCCccCCHHHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccChHHHHHHHHHH
Confidence 45666433333455555554443211 1111222233567999999999998888765556799999999999888877
Q ss_pred HHhh---CCCcEEEe-cCCCchHHHHHHHHcCC----eEEEEeCCCC---CccCHHHHHHHHHcCCCCcEEEEEeeCCCc
Q 011842 178 GREV---FPDGILYA-SRESHYSVFKAARMYRM----ECVKVDCLIS---GEIDCADFKAKLLQNKDKPAIINVNIGTTV 246 (476)
Q Consensus 178 a~~~---~p~~~Vl~-s~~~H~S~~~~~~~~G~----~v~~v~~~~~---g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~ 246 (476)
.... .+++.|++ ..++|..+...+...+. ....++++.+ ..+|++.|+ +.+ .+.++++++++|+
T Consensus 117 l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~~---~~~~i~l~~P~NP 191 (416)
T PRK09440 117 FAGRRADGSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIELLPEGQFKYHVDFEHLH--IDE---DTGAICVSRPTNP 191 (416)
T ss_pred HhccccCCCCCeEEEecCCCchhhHHHhhccCceeecccccccccccccccCCCHHHcc--cCC---CceEEEEecCCCC
Confidence 6541 25788998 69999888776654442 2333444332 478999987 322 2347888899999
Q ss_pred cccccC---HHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCcccccEEEEcCCCCCCCCCCceeEEeehh
Q 011842 247 KGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRME 323 (476)
Q Consensus 247 tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~ 323 (476)
||.+-+ +++|+++|++|++ ||++|++|+-.. +.............--++..|+.|+++.++++|+++.+++
T Consensus 192 TG~~~s~~~~~~l~~~a~~~~~-----~iI~De~Y~~~~-~~~~~~~~~~~~~~~vI~~~SfSK~~~pGlRiG~~i~~~~ 265 (416)
T PRK09440 192 TGNVLTDEELEKLDALARQHNI-----PLLIDNAYGPPF-PGIIFSEATPLWNPNIILCMSLSKLGLPGVRCGIVIADEE 265 (416)
T ss_pred CCccCCHHHHHHHHHHHHHcCC-----cEEEeCCccccC-CCcchhhcCccccCCeEEEecccccCCCcceEEEEeCCHH
Confidence 999966 7888999999999 999999996322 1110000000001112455788999899999999999888
Q ss_pred hhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHH-----HHHHHHHHHHHHHHHHHhc----CCeEeec
Q 011842 324 HINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQK-----EVQKCLRNAHYLKDRLLDA----GISAMLN 394 (476)
Q Consensus 324 ~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~-----~~~~~~~~a~~l~~~L~~~----g~~~~~~ 394 (476)
+++.+.....+. ..+. ..+.+.++...+....+.+ ..+...++.+.+.+.|++. ++....+
T Consensus 266 l~~~~~~~~~~~-------~~~~---s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~l~~~~~~~~~p 335 (416)
T PRK09440 266 IIEALSNMNGII-------SLAP---GRLGPAIAAEMIESGDLLRLSETVIRPFYRQKVQLAIALLRRYLPDEPCLIHKP 335 (416)
T ss_pred HHHHHHHHHHHh-------ccCC---CcHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCeEEecC
Confidence 776653322211 1111 2345555555553222322 2333445556666666653 2222233
Q ss_pred CCeeEEEEecCC----cHHHhh-----ceee-cc-----c--------CCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 011842 395 ELSSTVVFERPQ----DEEFVR-----RWQL-AC-----Q--------GNIAHVVVMPNVTIDKLDDFLNELIENRSTWY 451 (476)
Q Consensus 395 ~~~~iv~f~~~~----~~~~~~-----~~~l-~~-----~--------~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~ 451 (476)
..++.+.+..+. +.++.+ +..+ +. . .+.+|+++.. +.++++.+++.|.++.++..
T Consensus 336 ~gg~fiw~~~~~~~~~~~~~~~~l~~~gV~v~pg~~F~~~~~~~~~~~~~~iRis~~~--~~~~l~~~i~~l~~~~~~~~ 413 (416)
T PRK09440 336 EGAIFLWLWFKDLPITTEELYQRLKARGVLVVPGHYFFPGLDEDWPHAHQCIRMNYVQ--DDEEIEKGIAILAEEVEKAY 413 (416)
T ss_pred CCceEEEEECCCCCCCHHHHHHHHHHCCEEEechHhhCCCCccccCCcCceEEEEecC--CHHHHHHHHHHHHHHHHHHh
Confidence 445666555542 233322 2222 11 1 1479999873 68999999999999887654
Q ss_pred h
Q 011842 452 E 452 (476)
Q Consensus 452 ~ 452 (476)
+
T Consensus 414 ~ 414 (416)
T PRK09440 414 A 414 (416)
T ss_pred h
Confidence 3
No 222
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.79 E-value=4.5e-17 Score=166.95 Aligned_cols=209 Identities=15% Similarity=0.131 Sum_probs=152.2
Q ss_pred HHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHH----HHcCCeEEEEeCCCCCc
Q 011842 143 GVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAA----RMYRMECVKVDCLISGE 218 (476)
Q Consensus 143 ~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~----~~~G~~v~~v~~~~~g~ 218 (476)
++++.++++.|.+. .+++++|+.|+..++.+... +|+.|+++.+.|.+..... +..|++++.++..
T Consensus 65 ~Le~~lA~~~g~~~----~i~~~sG~~Ai~~~l~all~--~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~~d~~---- 134 (388)
T PRK07811 65 ALEEQLAALEGGAY----GRAFSSGMAATDCLLRAVLR--PGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTPVDLS---- 134 (388)
T ss_pred HHHHHHHHHhCCCc----eEEeCCHHHHHHHHHHHHhC--CCCEEEEcCCCchHHHHHHHHhCcCCCeEEEEeCCC----
Confidence 44555777788764 56777889999999888765 9999999999998644332 2247777777653
Q ss_pred cCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCcccc
Q 011842 219 IDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKPI 298 (476)
Q Consensus 219 ~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~~ 298 (476)
|+++|++++.++++ +|+++++++++|.+.|+++|+++|++||+ ++++|++|+.+... . .....+
T Consensus 135 -d~e~l~~~i~~~tk---lV~ie~p~NPtg~~~dl~~I~~la~~~gi-----~lIvD~a~a~~~~~----~---p~~~ga 198 (388)
T PRK07811 135 -DLDAVRAAITPRTK---LIWVETPTNPLLSITDIAALAELAHDAGA-----KVVVDNTFASPYLQ----Q---PLALGA 198 (388)
T ss_pred -CHHHHHHhcCcCCe---EEEEECCCCCcceecCHHHHHHHHHHcCC-----EEEEECCCCccccC----C---chhhCC
Confidence 89999999977665 88888999999999999999999999999 99999999765432 1 111248
Q ss_pred cEEEEcCCCCCCCCCC--ceeEEeehh-hhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHHH
Q 011842 299 GSVSVSGHKFVGCPMP--CGVQITRME-HINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLR 375 (476)
Q Consensus 299 Dsi~~s~hK~l~~p~~--~G~l~~~~~-~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~ 375 (476)
|+++.|++||+++|.. .|+++++++ +.+.+.....+. +.. ..++..|..+.. .+.+..++++..+
T Consensus 199 Divv~S~sK~l~g~~~~~gG~vv~~~~~l~~~~~~~~~~~--------g~~--~s~~~a~l~~~~--L~tl~~R~~~~~~ 266 (388)
T PRK07811 199 DVVVHSTTKYIGGHSDVVGGALVTNDEELDEAFAFLQNGA--------GAV--PGPFDAYLTLRG--LKTLAVRMDRHSE 266 (388)
T ss_pred cEEEecCceeecCCCCcEEEEEEECCHHHHHHHHHHHHhc--------CCC--CCHHHHHHHHhc--cCcHHHHHHHHHH
Confidence 9999999999997643 688888755 333332111111 111 123444544443 4567888999999
Q ss_pred HHHHHHHHHHhcCC
Q 011842 376 NAHYLKDRLLDAGI 389 (476)
Q Consensus 376 ~a~~l~~~L~~~g~ 389 (476)
++..+.+.|++.+.
T Consensus 267 na~~la~~L~~~p~ 280 (388)
T PRK07811 267 NAEAVAEFLAGHPE 280 (388)
T ss_pred HHHHHHHHHHhCCC
Confidence 99999999998764
No 223
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.79 E-value=3.5e-17 Score=167.41 Aligned_cols=211 Identities=18% Similarity=0.178 Sum_probs=155.8
Q ss_pred HHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchH----HHHHHHHcCCeEEEEeCCCC
Q 011842 141 EVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYS----VFKAARMYRMECVKVDCLIS 216 (476)
Q Consensus 141 e~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S----~~~~~~~~G~~v~~v~~~~~ 216 (476)
..++.+.+++++|.+. .+++++|+.|+..++.+... +++.|+++...|.+ +...+..+|++++.++.+
T Consensus 56 ~~~le~~la~l~g~~~----~~~~~sG~~Ai~~al~al~~--~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~~v~~v~~~-- 127 (380)
T TIGR01325 56 VAAFEERIAALEGAER----AVATATGMSAIQAALMTLLQ--AGDHVVASRSLFGSTVGFISEILPRFGIEVSFVDPT-- 127 (380)
T ss_pred HHHHHHHHHHHhCCCc----EEEECCHHHHHHHHHHHHhC--CCCEEEEecCCcchHHHHHHHHHHHhCCEEEEECCC--
Confidence 3445566788888853 78899999999999877755 88999998887754 334567789999999875
Q ss_pred CccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCcc
Q 011842 217 GEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKK 296 (476)
Q Consensus 217 g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~ 296 (476)
|++++++++.++++ +|++.++++++|.+.|+++|.++|+++|+ ++++|++|+.+... . + + ..
T Consensus 128 ---d~~~l~~~i~~~tk---lV~le~p~np~g~~~dl~~I~~la~~~gi-----~livD~a~~~~~~~--~--p-l--~~ 189 (380)
T TIGR01325 128 ---DLNAWEAAVKPNTK---LVFVETPSNPLGELVDIAALAELAHAIGA-----LLVVDNVFATPVLQ--Q--P-L--KL 189 (380)
T ss_pred ---CHHHHHHhcCCCce---EEEEECCCCCCCeeeCHHHHHHHHHHcCC-----EEEEECCCcccccC--C--c-h--hh
Confidence 78999998876554 88888999999999999999999999999 99999999754321 1 0 1 12
Q ss_pred cccEEEEcCCCCCCCCC-Cc-eeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHH
Q 011842 297 PIGSVSVSGHKFVGCPM-PC-GVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCL 374 (476)
Q Consensus 297 ~~Dsi~~s~hK~l~~p~-~~-G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~ 374 (476)
++|+++.|++|+++++. .. |+++.+++.++.+...... .+.. ..+...|.+++ +.+.+..++++..
T Consensus 190 g~Divv~S~sK~l~g~g~~~gG~vv~~~~~~~~l~~~~~~--------~g~~--~~p~~a~~~l~--~l~tl~~r~~~~~ 257 (380)
T TIGR01325 190 GADVVVYSATKHIDGQGRVMGGVIAGSEELMAEVAVYLRH--------TGPA--MSPFNAWVLLK--GLETLSLRMQKQF 257 (380)
T ss_pred CCCEEEeeccceecCCCCeEEEEEEeCHHHHHHHHHHHHh--------hCCC--CCHHHHHHHHh--ccCcHHHHHHHHH
Confidence 48999999999998653 33 6777777665544211111 1111 12344555544 4567788899999
Q ss_pred HHHHHHHHHHHhcCC
Q 011842 375 RNAHYLKDRLLDAGI 389 (476)
Q Consensus 375 ~~a~~l~~~L~~~g~ 389 (476)
+++.++.+.|++.+.
T Consensus 258 ~~a~~la~~L~~~p~ 272 (380)
T TIGR01325 258 DSALAIAEWLQAQPQ 272 (380)
T ss_pred HHHHHHHHHHHcCCC
Confidence 999999999999863
No 224
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.79 E-value=4e-17 Score=166.85 Aligned_cols=212 Identities=16% Similarity=0.113 Sum_probs=154.9
Q ss_pred HHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHH----HHcCCeEEEEeCCCC
Q 011842 141 EVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAA----RMYRMECVKVDCLIS 216 (476)
Q Consensus 141 e~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~----~~~G~~v~~v~~~~~ 216 (476)
..++.+.++++.|.+ .+++|+||++|+..++.+... ||+.|+++.+.|.+..... ...|+++..++.
T Consensus 53 ~~~le~~lA~l~g~~----~v~~~~gg~~Ai~~~l~all~--~GD~Vl~~~p~y~~~~~~~~~~~~~~~~~v~~~d~--- 123 (382)
T TIGR02080 53 RDLLQQALAELEGGA----GAVVTNTGMSAIHLVTTALLG--PDDLLVAPHDCYGGTYRLLNALAKKGCFRVLFVDQ--- 123 (382)
T ss_pred HHHHHHHHHHHhCCC----cEEEEcCHHHHHHHHHHHHcC--CCCEEEEcCCCcHHHHHHHHHHHhhcCeEEEEECC---
Confidence 345556678888743 289999999999988888765 8999999999997644332 223456665542
Q ss_pred CccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCcc
Q 011842 217 GEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKK 296 (476)
Q Consensus 217 g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~ 296 (476)
.|++.+++++.++++ +|++++++|++|.+.|+++|+++|+++|+ ++++|++|..+.... + + ..
T Consensus 124 --~d~~~l~~ai~~~tk---lV~l~~p~NPtG~~~dl~~I~~la~~~g~-----~vvvD~a~~~~~~~~----p-l--~~ 186 (382)
T TIGR02080 124 --GDEQALRAALAQKPK---LVLIETPSNPLLRVVDIAKICHLAKAVGA-----VVVVDNTFLSPALQN----P-L--AL 186 (382)
T ss_pred --CCHHHHHHhcCcCce---EEEEECCCCCCCEecCHHHHHHHHHHcCC-----EEEEECCCcccccCC----c-h--hh
Confidence 389999999977654 88888999999999999999999999999 999999997543321 1 1 12
Q ss_pred cccEEEEcCCCCCCCCCC--ceeEEeehh-hhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHH
Q 011842 297 PIGSVSVSGHKFVGCPMP--CGVQITRME-HINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKC 373 (476)
Q Consensus 297 ~~Dsi~~s~hK~l~~p~~--~G~l~~~~~-~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~ 373 (476)
++|+++.|++||++++.+ .|+++++++ +.+.+.....++... ..++..|..++ |.+.+..++++.
T Consensus 187 gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~l~~~~~~~g~~----------~sp~~a~l~lr--~l~tl~~R~~~~ 254 (382)
T TIGR02080 187 GADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEELAWWANNLGVT----------GGAFDSYLTLR--GLRTLVARMRLQ 254 (382)
T ss_pred CCCEEEeecceeccCCCCceeEEEEeCCHHHHHHHHHHHHccCCC----------CCHHHHHHHHc--ccchHHHHHHHH
Confidence 379999999999987654 788777654 444443222232111 23466666654 456778889999
Q ss_pred HHHHHHHHHHHHhcCCe
Q 011842 374 LRNAHYLKDRLLDAGIS 390 (476)
Q Consensus 374 ~~~a~~l~~~L~~~g~~ 390 (476)
.+++..+.+.|++.+..
T Consensus 255 ~~na~~~a~~L~~~p~v 271 (382)
T TIGR02080 255 QRNAQAIVEYLQTQPLV 271 (382)
T ss_pred HHHHHHHHHHHHhCCCe
Confidence 99999999999988753
No 225
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.79 E-value=5.7e-17 Score=165.83 Aligned_cols=212 Identities=16% Similarity=0.103 Sum_probs=155.9
Q ss_pred HHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHH----HHHcCCeEEEEeCCCC
Q 011842 141 EVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKA----ARMYRMECVKVDCLIS 216 (476)
Q Consensus 141 e~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~----~~~~G~~v~~v~~~~~ 216 (476)
...+.++++++.|.+ .+++|+||++|+..++.+... ||+.|+++.+.|.+.... ....|+++..++
T Consensus 54 ~~~L~~~lA~l~g~~----~~i~~~sg~~Ai~~~l~~l~~--~GD~Vl~~~~~y~~~~~~~~~~~~~~gi~v~~vd---- 123 (386)
T PRK08045 54 RDVVQRALAELEGGA----GAVLTNTGMSAIHLVTTVFLK--PGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVD---- 123 (386)
T ss_pred HHHHHHHHHHHhCCC----eEEEECCHHHHHHHHHHHHcC--CCCEEEEcCCCcHHHHHHHHHHHhhCCeEEEEeC----
Confidence 345566678888853 289999999999988877665 999999999999754332 222344666654
Q ss_pred CccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCcc
Q 011842 217 GEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKK 296 (476)
Q Consensus 217 g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~ 296 (476)
..|++++++++.++++ +|.+++++|++|.+.|+++|.++|+++|+ ++++|++|..+... . ....
T Consensus 124 -~~d~e~l~~~l~~~tk---lV~l~sP~NPtG~v~di~~I~~ia~~~g~-----~vivDeay~~~~~~----~---pl~~ 187 (386)
T PRK08045 124 -QGDEQALRAALAEKPK---LVLVESPSNPLLRVVDIAKICHLAREAGA-----VSVVDNTFLSPALQ----N---PLAL 187 (386)
T ss_pred -CCCHHHHHHhcccCCe---EEEEECCCCCCCEecCHHHHHHHHHHcCC-----EEEEECCCCccccC----C---chhh
Confidence 2589999999876654 88889999999999999999999999999 99999999765432 1 1122
Q ss_pred cccEEEEcCCCCCCCCCC--ceeEEeehh-hhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHH
Q 011842 297 PIGSVSVSGHKFVGCPMP--CGVQITRME-HINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKC 373 (476)
Q Consensus 297 ~~Dsi~~s~hK~l~~p~~--~G~l~~~~~-~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~ 373 (476)
++|+++.|++||++++.+ .|+++++++ +.+.+.....++.. + ..++..|..++.+ +.+..++++.
T Consensus 188 gaDivv~S~tK~l~G~~d~~~G~vi~~~~~~~~~l~~~~~~~g~-------~---~~p~~~~l~~rgl--~tl~~R~~~~ 255 (386)
T PRK08045 188 GADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGV-------T---GGAFDSYLLLRGL--RTLVPRMELA 255 (386)
T ss_pred CCCEEEeecceeccCCCCceeEEEEeCcHHHHHHHHHHHHhcCC-------C---CCHHHHHHHHhhh--ccHHHHHHHH
Confidence 489999999999986654 687777544 44444222223211 1 2356777666654 5688999999
Q ss_pred HHHHHHHHHHHHhcCCe
Q 011842 374 LRNAHYLKDRLLDAGIS 390 (476)
Q Consensus 374 ~~~a~~l~~~L~~~g~~ 390 (476)
.+++..+.+.|++.+..
T Consensus 256 ~~na~~la~~L~~~p~v 272 (386)
T PRK08045 256 QRNAQAIVKYLQTQPLV 272 (386)
T ss_pred HHHHHHHHHHHHcCCCE
Confidence 99999999999998753
No 226
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.79 E-value=3.7e-17 Score=168.07 Aligned_cols=210 Identities=19% Similarity=0.184 Sum_probs=153.8
Q ss_pred HHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHH----HHHHHcCCeEEEEeCCCCC
Q 011842 142 VGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVF----KAARMYRMECVKVDCLISG 217 (476)
Q Consensus 142 ~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~----~~~~~~G~~v~~v~~~~~g 217 (476)
.++.+.+++++|.+. ..++++|+.|+..++.+... ||+.|+++.+.|.+.. ..+...|++++.++.
T Consensus 68 ~~Le~~lA~l~G~~~----~~~~~sG~~Ai~~~l~~~l~--~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~---- 137 (398)
T PRK07504 68 DMFEKRMCALEGAED----ARATASGMAAVTAAILCQVK--AGDHVVAARALFGSCRYVVETLLPRYGIESTLVDG---- 137 (398)
T ss_pred HHHHHHHHHHhCCCe----eeEecCHHHHHHHHHHHHhC--CCCEEEEcCCchhHHHHHHHHHHhhcCeEEEEECC----
Confidence 345556788889875 45788999999877776554 8999999999887643 334556888888862
Q ss_pred ccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCccc
Q 011842 218 EIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKP 297 (476)
Q Consensus 218 ~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~ 297 (476)
+|++++++++.++++ +|+++++++++|.+.|+++|.++|+++|+ ++++|++|+.+.... + . ..+
T Consensus 138 -~d~e~l~~ai~~~tk---lV~lesp~NptG~v~dl~~I~~la~~~gi-----~lvvD~a~a~~~~~~----~-~--~~g 201 (398)
T PRK07504 138 -LDLDNWEKAVRPNTK---VFFLESPTNPTLEVIDIAAVAKIANQAGA-----KLVVDNVFATPLFQK----P-L--ELG 201 (398)
T ss_pred -CCHHHHHHhcCcCce---EEEEECCCCCCcEecCHHHHHHHHHHcCC-----EEEEECCccccccCC----c-h--hhC
Confidence 689999999977665 89899999999999999999999999999 999999997544321 0 1 124
Q ss_pred ccEEEEcCCCCCCC-CCCce-eEEeehhhhhh-hcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHH
Q 011842 298 IGSVSVSGHKFVGC-PMPCG-VQITRMEHINV-LSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCL 374 (476)
Q Consensus 298 ~Dsi~~s~hK~l~~-p~~~G-~l~~~~~~~~~-l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~ 374 (476)
+|+++.|+|||+++ +++.| +++.+++.+.. +. .++. ..+.. ..++.+|..++ +.+.+..++++..
T Consensus 202 aDivv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~---~~~~-----~~g~~--~s~~~A~~~l~--~L~tl~~R~~~~~ 269 (398)
T PRK07504 202 AHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQ---DYFR-----HTGPS--LSPFNAWTLLK--GLETLPVRVRQQT 269 (398)
T ss_pred CCEEEeeccccccCCccceEEEEEeCcHHHHHHHH---HHHH-----HhCCC--CCHHHHHHHHh--ccchHHHHHHHHH
Confidence 89999999999975 34565 55555554432 21 1111 11222 23455665555 4567888999999
Q ss_pred HHHHHHHHHHHhcCC
Q 011842 375 RNAHYLKDRLLDAGI 389 (476)
Q Consensus 375 ~~a~~l~~~L~~~g~ 389 (476)
++++.+.+.|++.+.
T Consensus 270 ~na~~la~~L~~~p~ 284 (398)
T PRK07504 270 ESAAAIADFLAGHPK 284 (398)
T ss_pred HHHHHHHHHHHcCCC
Confidence 999999999998753
No 227
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.79 E-value=1.3e-16 Score=160.83 Aligned_cols=271 Identities=12% Similarity=0.046 Sum_probs=180.8
Q ss_pred hHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCC
Q 011842 137 SRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLIS 216 (476)
Q Consensus 137 ~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~ 216 (476)
..++++++ ++++|++++ ++++|+|+++++...+.+. +++.|+++.+.|..+...++..|++++.++.+.+
T Consensus 57 ~~~lr~~i----a~~~~~~~~--~I~~t~G~~~~l~~~~~~~----~gd~V~v~~P~y~~~~~~~~~~g~~~~~v~~~~~ 126 (337)
T PRK03967 57 SDPLREAI----AEFYGLDAE--NIAVGNGSDELISYLVKLF----EGKHIVITPPTFGMYSFYAKLNGIPVIDVPLKED 126 (337)
T ss_pred HHHHHHHH----HHHhCcCcc--eEEEcCCHHHHHHHHHHHh----CCCeEEEeCCChHHHHHHHHHcCCeEEEeecCCC
Confidence 34565554 455567653 5999999999987654432 7899999999999888888999999999999877
Q ss_pred CccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCcc
Q 011842 217 GEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKK 296 (476)
Q Consensus 217 g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~ 296 (476)
+.+|++.|++.+ ++++ +++++++.|+||.+-+.++|.++++ +++ ++++|++|..+... ...+..+..+
T Consensus 127 ~~~d~~~l~~~~-~~~~---~v~~~~P~NPtG~~~~~~~l~~i~~-~~~-----~ii~De~y~~~~~~--~~~~~~~~~~ 194 (337)
T PRK03967 127 FTIDGERIAEKA-KNAS---AVFICSPNNPTGNLQPEEEILKVLE-TGK-----PVVLDEAYAEFSGK--SLIGLIDEYP 194 (337)
T ss_pred CCcCHHHHHHhc-cCCC---EEEEeCCCCCCCCCCCHHHHHHHHh-cCC-----EEEEECchhhhccc--chHHHHhhCC
Confidence 889999998865 3343 6667899999999999999999995 799 99999999754311 1110011111
Q ss_pred cccEEEEcCCCCCC-CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhC-hhcHHHHHHHHH
Q 011842 297 PIGSVSVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKG-YKGFQKEVQKCL 374 (476)
Q Consensus 297 ~~Dsi~~s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g-~~g~~~~~~~~~ 374 (476)
. -++..|+.|.++ .++++|++++++++++.+....... + ...+.+.++...+. .+-+.+.+++..
T Consensus 195 ~-vi~l~S~SK~~~l~GlRiG~iv~~~~~i~~~~~~~~~~---------~---~~~~~q~~~~~~l~~~~~~~~~~~~~~ 261 (337)
T PRK03967 195 N-LILLRTFSKAFGLAGIRAGYAIANEEIIDALYRIKPPF---------S---LNILTMKIVRLALDHYDLIEERIDYII 261 (337)
T ss_pred C-EEEEecchHhhcchhhhheeeecCHHHHHHHHhhcCCC---------C---CCHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence 2 245678999887 8899999999888776654322110 1 11344444443332 223444555666
Q ss_pred HHHHHHHHHHHhcCCeEeecCCeeEEEEecCCcHHH-hhceeec----ccCCEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Q 011842 375 RNAHYLKDRLLDAGISAMLNELSSTVVFERPQDEEF-VRRWQLA----CQGNIAHVVVMPNVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 375 ~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~~~~~-~~~~~l~----~~~~~lRv~~~~~~T~edid~~~~~l~~~~~~ 449 (476)
+.++.+.+.|.+.. .++.++.+.+..+-...+ .++..+. ...+.+|+++. +.++.++|+++|+++.+.
T Consensus 262 ~~r~~l~~~L~~~~----~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~Ri~~~---~~~~~~~l~~~l~~~~~~ 334 (337)
T PRK03967 262 KERERVRRELGEYA----YPSDANFLLLKLDAYDYLLENGIVVRKLSGRLEGHIRVTVG---KREENDEFIKALKEIKEG 334 (337)
T ss_pred HHHHHHHHHhccCc----CCCCCcEEEEhHHHHHHHHHCCEEEEeCCCCCCCeEEEecC---CHHHHHHHHHHHHHHHHh
Confidence 67777888887542 244555555544321222 2333331 12357898874 688999999999877543
No 228
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.78 E-value=1.1e-16 Score=163.96 Aligned_cols=282 Identities=16% Similarity=0.044 Sum_probs=178.1
Q ss_pred HHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCC-CCccCH
Q 011842 143 GVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLI-SGEIDC 221 (476)
Q Consensus 143 ~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~-~g~~D~ 221 (476)
++++.+++++|.+. .++++|||+|+..++.+.. ..||+.|+++.++|.++..++...|++++.+++++ ++.+|+
T Consensus 33 ~le~~la~~~g~~~----~v~~~sgt~al~~~l~al~-~~~Gd~Viv~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~d~ 107 (380)
T TIGR03588 33 AFEEALAEYVGAKY----AVAFNSATSALHIACLALG-VGPGDRVWTTPITFVATANCALYCGAKVDFVDIDPDTGNIDE 107 (380)
T ss_pred HHHHHHHHHHCCCe----EEEEcCHHHHHHHHHHHcC-CCCCCEEEeCCcchHHHHHHHHHcCCEEEEEecCCCcCCcCH
Confidence 34444667777753 6777889999998887762 23899999999999999999999999999999964 678999
Q ss_pred HHHHHHHH----cCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCccc
Q 011842 222 ADFKAKLL----QNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKP 297 (476)
Q Consensus 222 ~~Le~~l~----~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~ 297 (476)
++|++.++ ++++ +|++++ ++|...|+++|.++|++||+ ++++|++|+.+..-.... +.....
T Consensus 108 ~~l~~~i~~~~~~~t~---~v~~~~---~~G~~~~~~~i~~l~~~~~~-----~lI~D~a~a~g~~~~~~~---~g~~~~ 173 (380)
T TIGR03588 108 DALEKKLAAAKGKLPK---AIVPVD---FAGKSVDMQAIAALAKKHGL-----KIIEDASHALGAEYGGKP---VGNCRY 173 (380)
T ss_pred HHHHHHhhcccCCCce---EEEEeC---CCCccCCHHHHHHHHHHcCC-----EEEEECCCcccCccCCEe---CCCccc
Confidence 99999998 3443 665554 46999999999999999999 999999998553211111 111113
Q ss_pred ccEEEEcCC--CCCCCCCCceeEEeehh-hhhhhc---CC-----cc-ccCC--CCCcc----cCCCCChhHHHHHHHHH
Q 011842 298 IGSVSVSGH--KFVGCPMPCGVQITRME-HINVLS---SN-----VE-YLAS--RDATI----MGSRNGHAPIFLWYTLN 359 (476)
Q Consensus 298 ~Dsi~~s~h--K~l~~p~~~G~l~~~~~-~~~~l~---~~-----~~-yl~~--~~~~~----~~sr~~~~~l~~~~~l~ 359 (476)
.|+.++|+| |++.+| ..|+++++++ +.+.+. .. .. +... ....+ .|.......+.....+.
T Consensus 174 ~d~~~~S~~~~K~~~~~-~GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~n~~m~~l~aa~g~~ 252 (380)
T TIGR03588 174 ADATVFSFHPVKIITTA-EGGAVTTNDEELAERMRLLRSHGITKDPLLFEKQDEGPWYYEQQELGFNYRMTDIQAALGLS 252 (380)
T ss_pred cceEEEecCCCCccccc-CceEEEECCHHHHHHHHHHHHCCCCCCcccccccccCcceeeeeccccccCccHHHHHHHHH
Confidence 599999988 899876 4555666544 333221 00 00 0000 00000 01110111122111222
Q ss_pred HhChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecC--C--e----eEEEEecC---CcHHHhh-----ceee-----cc
Q 011842 360 RKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNE--L--S----STVVFERP---QDEEFVR-----RWQL-----AC 418 (476)
Q Consensus 360 ~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~--~--~----~iv~f~~~---~~~~~~~-----~~~l-----~~ 418 (476)
..+.+.++.++.+++++++.+.|+..+......+ . + .++.+... ..+.+.+ +..+ +.
T Consensus 253 --qL~~l~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~r~~l~~~L~~~gI~~~~~~~~~ 330 (380)
T TIGR03588 253 --QLKKLDRFVAKRREIAARYDRLLKDLPYFTPLTIPLGSKSAWHLYPILLDQEFGCTRKEVFEALRAAGIGVQVHYIPV 330 (380)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCEeEEEEEEEEECCcCCCCHHHHHHHHHHCCCCcccCCccc
Confidence 2355788889999999999999998764332221 1 1 12222211 1122211 1100 10
Q ss_pred ----------c-----------CCEEEEEEcCCCCHHHHHHHHHHHHHH
Q 011842 419 ----------Q-----------GNIAHVVVMPNVTIDKLDDFLNELIEN 446 (476)
Q Consensus 419 ----------~-----------~~~lRv~~~~~~T~edid~~~~~l~~~ 446 (476)
. ...+++-+++..|++||++++++|+++
T Consensus 331 ~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~dv~~i~~~l~~~ 379 (380)
T TIGR03588 331 HLQPYYRQGFGDGDLPSAENFYLAEISLPLHPALTLEQQQRVVETLRKV 379 (380)
T ss_pred ccChhhhccCCcCCCcHHHHHHhceEEcCCCCCCCHHHHHHHHHHHHHh
Confidence 0 145777789999999999999999875
No 229
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.78 E-value=2.9e-16 Score=159.53 Aligned_cols=274 Identities=13% Similarity=0.018 Sum_probs=181.6
Q ss_pred hhHHHHHHHHHHHHHHcCCC-CCcccEEEcCCchhHHHHHHHHH-HhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeC
Q 011842 136 HSRQFEVGVLDWFARLWELE-NNEYWGYITNCGTEGNLHGILVG-REVFPDGILYASRESHYSVFKAARMYRMECVKVDC 213 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~-~~~~~g~~t~ggt~An~~al~aa-~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~ 213 (476)
+..++++++.+++.+..|.+ .+..++++|+|+++++..++.+. .. +|+.|++++++|.++...++.+|++++.++
T Consensus 57 G~~~lr~~ia~~~~~~~~~~~~~~~~I~it~G~~~~i~~~~~~l~~~--~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~- 133 (357)
T TIGR03539 57 GTPELREAIVDWLERRRGVPGLDPTAVLPVIGTKELVAWLPTLLGLG--PGDTVVIPELAYPTYEVGALLAGATPVAAD- 133 (357)
T ss_pred CCHHHHHHHHHHHHHhcCCCCCCcCeEEEccChHHHHHHHHHHHcCC--CCCEEEECCCCcHHHHHHHHhcCCEEeccC-
Confidence 56799999999999987765 44456999999999988766654 34 899999999999999999999999887774
Q ss_pred CCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCcccccccccccCC
Q 011842 214 LISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAP 290 (476)
Q Consensus 214 ~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~ 290 (476)
|++.++. + ++.+|++++++|+||.+-+ +++|+++|++||+ ++++|++|+.+.+.. ....
T Consensus 134 ------~~~~l~~---~---~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~-----~ii~De~y~~~~~~~-~~~~ 195 (357)
T TIGR03539 134 ------DPTELDP---V---GPDLIWLNSPGNPTGRVLSVDELRAIVAWARERGA-----VVASDECYLELGWEG-RPVS 195 (357)
T ss_pred ------ChhhcCc---c---CccEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCe-----EEEEecchhhhccCC-CCcc
Confidence 3333321 2 2347778889999999865 7789999999999 999999997543321 1111
Q ss_pred CCCC-----cccccEEEEcCCCCC-CCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhCh-
Q 011842 291 KVSF-----KKPIGSVSVSGHKFV-GCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGY- 363 (476)
Q Consensus 291 ~~~~-----~~~~Dsi~~s~hK~l-~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~- 363 (476)
.++. ...-.++..|+.|.+ ++++++|+++.++++++.+.....+. ..+. ..+.+.++...+..
T Consensus 196 ~~~~~~~~~~~~~vi~~~S~SK~~~~~G~R~G~~i~~~~~~~~~~~~~~~~-------~~~~---~~~~q~~~~~~l~~~ 265 (357)
T TIGR03539 196 ILDPRVCGGDHTGLLAVHSLSKRSNLAGYRAGFVAGDPALVAELLTVRKHA-------GLMV---PAPVQAAMVAALGDD 265 (357)
T ss_pred ceecccCCCccccEEEEeccccccCCCceeEEEEecCHHHHHHHHHHHhhc-------ccCC---CHHHHHHHHHHcCCH
Confidence 1110 011136667889976 67899999998877665543211111 0111 13344444444432
Q ss_pred hcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEe-cCCc-HHHh-----hceeecc-------cCCEEEEEEcC
Q 011842 364 KGFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFE-RPQD-EEFV-----RRWQLAC-------QGNIAHVVVMP 429 (476)
Q Consensus 364 ~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~-~~~~-~~~~-----~~~~l~~-------~~~~lRv~~~~ 429 (476)
..+++..++..++++++.+.|++.|+. +.++.+++++|. .+.+ .++. +++.+.. ..+++|+++..
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~L~~~g~~-~~~p~~~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~iRis~~~ 344 (357)
T TIGR03539 266 GHVAEQKARYAARRAQLKPALEKAGFR-IDHSEAGLYLWATRGEDAWDTVDRLAELGILVAPGDFYGPAGSQHVRVALTA 344 (357)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCC-CcCCCccEEEEEECCCCHHHHHHHHHhCCEEECCccccCCCCCCeEEEEecC
Confidence 335556677778888999999888754 344545554443 3322 2222 2333321 23689999864
Q ss_pred CCCHHHHHHHHHHH
Q 011842 430 NVTIDKLDDFLNEL 443 (476)
Q Consensus 430 ~~T~edid~~~~~l 443 (476)
+.++|+..++.|
T Consensus 345 --~~~~i~~~~~~l 356 (357)
T TIGR03539 345 --TDERIAAAVARL 356 (357)
T ss_pred --CHHHHHHHHHhh
Confidence 688988888765
No 230
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.78 E-value=1.2e-16 Score=166.64 Aligned_cols=293 Identities=10% Similarity=0.062 Sum_probs=196.2
Q ss_pred hhHHHHHHHHHHHHHHcCC--CCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHH-HcCCeEEEEe
Q 011842 136 HSRQFEVGVLDWFARLWEL--ENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAAR-MYRMECVKVD 212 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~--~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~-~~G~~v~~v~ 212 (476)
|...+++++++++.+.+|. +.++..+++|+|+++|+.+.+.+..+ ||+.|+++.+.|..+...++ ..|++++.|+
T Consensus 96 G~~~LR~aiA~~l~~~~~~~~~v~p~~Ivit~G~t~al~~l~~~l~~--pGD~Vlv~~P~Y~~f~~~~~~~~g~~vv~v~ 173 (447)
T PLN02607 96 GLKSFRQAMASFMEQIRGGKARFDPDRIVLTAGATAANELLTFILAD--PGDALLVPTPYYPGFDRDLRWRTGVKIVPIH 173 (447)
T ss_pred chHHHHHHHHHHHHHhcCCCCCcCHHHeEEcCChHHHHHHHHHHhCC--CCCEEEEcCCCCcchHHHHHhcCCcEEEEEe
Confidence 5679999999999988773 23334699999999999887777666 99999999999998887776 4799999999
Q ss_pred CCC--CCccCHHHHHHHHHcC---CCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCccccccc
Q 011842 213 CLI--SGEIDCADFKAKLLQN---KDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMP 284 (476)
Q Consensus 213 ~~~--~g~~D~~~Le~~l~~~---~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~ 284 (476)
+++ ++.+|++.|++++.+. +.++.++++++|+|++|.+-+ +++|.++|++|++ ++++|++|+..++.
T Consensus 174 ~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i-----~lI~DEiYa~~~f~ 248 (447)
T PLN02607 174 CDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNI-----HLVSDEIYSGSVFS 248 (447)
T ss_pred CCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCC-----EEEEeccccccccC
Confidence 874 3468999999998751 233457778899999999866 7899999999999 99999999876543
Q ss_pred ccccCCCCC---------CcccccEEEEcCCCCCC-CCCCceeEEeehh-hhhhhcCCccccCCCCCcccCCCCChhHHH
Q 011842 285 FVKKAPKVS---------FKKPIGSVSVSGHKFVG-CPMPCGVQITRME-HINVLSSNVEYLASRDATIMGSRNGHAPIF 353 (476)
Q Consensus 285 ~~~~~~~~~---------~~~~~Dsi~~s~hK~l~-~p~~~G~l~~~~~-~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~ 353 (476)
.....+... ..+++ .+..++.|-++ .++++|+++..++ +...+.....|. .. ..+.
T Consensus 249 ~~~f~S~~s~~~~~~~~~~~~~v-~vi~s~SK~fg~~GlRvG~ivs~n~~l~~~~~~~~~~~---------~~---s~~~ 315 (447)
T PLN02607 249 ASEFVSVAEIVEARGYKGVAERV-HIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSFT---------LV---SSQT 315 (447)
T ss_pred CCCcccHHHHHhhcCCCCCcCcE-EEEEcchhcCCCCcceEEEEEEcCHHHHHHHHHHhhcC---------CC---CHHH
Confidence 211111111 01223 34567788665 8999999998543 444432222221 00 1233
Q ss_pred HHHHHHHhChhc-----HHHHHHHHHHHHHHHHHHHHhcCCeEeecCC-eeEEEEecCC-------cH--HH----hh--
Q 011842 354 LWYTLNRKGYKG-----FQKEVQKCLRNAHYLKDRLLDAGISAMLNEL-SSTVVFERPQ-------DE--EF----VR-- 412 (476)
Q Consensus 354 ~~~~l~~~g~~g-----~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~-~~iv~f~~~~-------~~--~~----~~-- 412 (476)
+.++...+.... ++...+++.+..+.+.+.|++.|+.. .++. ...+.++.+. .. ++ .+
T Consensus 316 q~~~~~~L~d~~~~~~~l~~~r~~l~~~~~~~~~~L~~~gi~~-~~~~ag~fvw~~L~~~~~~~~~~~e~~l~~~ll~~~ 394 (447)
T PLN02607 316 QHLLASMLSDEEFTENYIRTNRERLRKRYEMIVQGLRRAGIEC-LKGNAGLFCWMNLSPLLETPTREGELALWDSILREV 394 (447)
T ss_pred HHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCCCc-ccCCeeEEEEEEchHhhcCCCchhHHHHHHHHHHhC
Confidence 333333333222 34455666778888999999888643 3444 4444444431 11 11 21
Q ss_pred ceeecc-------cCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 011842 413 RWQLAC-------QGNIAHVVVMPNVTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 413 ~~~l~~-------~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~ 450 (476)
+..+.. ..+++|+++.. .++++++..++.|.+..++.
T Consensus 395 gV~v~pG~~f~~~~~g~fRi~fa~-~~~~~l~~gl~Ri~~~l~~~ 438 (447)
T PLN02607 395 KLNISPGSSCHCSEPGWFRVCFAN-MSEDTLEVALKRIHRFMDRR 438 (447)
T ss_pred CEEEcCccccCCCCCCEEEEEecc-CCHHHHHHHHHHHHHHHHHH
Confidence 333321 24799998874 45888998888888877543
No 231
>PRK15029 arginine decarboxylase; Provisional
Probab=99.78 E-value=2.3e-16 Score=170.61 Aligned_cols=228 Identities=13% Similarity=0.039 Sum_probs=161.5
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCC--C
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLI--S 216 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~--~ 216 (476)
..-.++.+..|+++|.+.. -++|+|+|.+|..+++++.. +|+.|++++..|-|+..++.+.|+.+++++... .
T Consensus 205 G~I~eAq~~aA~~fgA~~t---~FlvNGST~gn~a~i~a~~~--~gd~Vlv~RN~HKSv~~al~L~ga~Pvyl~P~~~~~ 279 (755)
T PRK15029 205 GAFGESEKYAARVFGADRS---WSVVVGTSGSNRTIMQACMT--DNDVVVVDRNCHKSIEQGLILTGAKPVYMVPSRNRY 279 (755)
T ss_pred cHHHHHHHHHHHHhCCCcE---EEEeCChhHHHHHHHHHhcC--CCCEEEeecccHHHHHHHHHHcCCeEEEeccccccc
Confidence 4566778889999999853 67889999999988888876 999999999999999999999999999986542 1
Q ss_pred ---CccC-----HHHHHHHHHcCC-------CCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccc
Q 011842 217 ---GEID-----CADFKAKLLQNK-------DKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGL 281 (476)
Q Consensus 217 ---g~~D-----~~~Le~~l~~~~-------~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~ 281 (476)
+.++ ++.++++|.+++ .+|..+++|++ |+.|.+.++++|+++|+++++ .|+||+|||+.
T Consensus 280 Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~P-TY~Gv~~di~~I~~~~h~~~~-----~llvDEAhGah 353 (755)
T PRK15029 280 GIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYNAKEAQDLLEKTSD-----RLHFDEAWYGY 353 (755)
T ss_pred CCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECC-CCcceeeCHHHHHHHHHhcCC-----eEEEECccccc
Confidence 3455 999999997653 35667888765 578999999999999999999 99999999875
Q ss_pred cccccccCCC-CCC-----c-cccc-EEEEcCCCCCCCCCCceeEEeehh--hhh--hhcCCccccCCCCCcccCCCCCh
Q 011842 282 MMPFVKKAPK-VSF-----K-KPIG-SVSVSGHKFVGCPMPCGVQITRME--HIN--VLSSNVEYLASRDATIMGSRNGH 349 (476)
Q Consensus 282 ~~~~~~~~~~-~~~-----~-~~~D-si~~s~hK~l~~p~~~G~l~~~~~--~~~--~l~~~~~yl~~~~~~~~~sr~~~ 349 (476)
... ....+. ... . .++| .++-|.||.|.+-...+++.+++. .++ .+......+.++ -+
T Consensus 354 ~~F-~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~alTQaS~LHv~~~~~~id~~r~~~~l~~~qST-------SP-- 423 (755)
T PRK15029 354 ARF-NPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAINFSRFNQAYMMHATT-------SP-- 423 (755)
T ss_pred ccc-CccccccccccccccccCCCceEEEEchhhcccchhhhhhheeCCCccccCHHHHHHHHHHHcCC-------Cc--
Confidence 432 221111 111 2 3478 888999999999999999998654 221 221111111111 11
Q ss_pred hHHHHHHHH----HHhChhcHHHHHHHHHHHHHHHHHHHHhcC
Q 011842 350 APIFLWYTL----NRKGYKGFQKEVQKCLRNAHYLKDRLLDAG 388 (476)
Q Consensus 350 ~~l~~~~~l----~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g 388 (476)
+..+.+++ +.+....-++.+++..+.+..|++.|++.+
T Consensus 424 -SY~LmASLD~ar~~m~~~~G~~l~~~~i~~~~~~r~~l~~~~ 465 (755)
T PRK15029 424 -LYAICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLY 465 (755)
T ss_pred -HHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhcc
Confidence 12222222 222111235567777888888888887653
No 232
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.78 E-value=1.7e-16 Score=162.36 Aligned_cols=282 Identities=13% Similarity=0.070 Sum_probs=175.7
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhC-----CCcEEEecCCCchHHHHHHHHcCCeEE----
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVF-----PDGILYASRESHYSVFKAARMYRMECV---- 209 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~-----p~~~Vl~s~~~H~S~~~~~~~~G~~v~---- 209 (476)
+...++.+++++++|.+ ..++++||++|+..++.+++... +++.|++.++++..+...+...+....
T Consensus 69 ~~~~~l~~~la~~~g~~----~~~~~~sg~~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~ 144 (379)
T TIGR00707 69 EPQEELAEKLVEHSGAD----RVFFCNSGAEANEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQKG 144 (379)
T ss_pred HHHHHHHHHHHhhCCCC----EEEEeCCcHHHHHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhhcc
Confidence 56777888899999875 38999999999999998775321 257888877766444433433333221
Q ss_pred EEeCCCCCcc----CHHHHHHHHHcCCCCcEEEEEeeCCCccccc----cCHHHHHHHHHHhCCCCCceEEEEecCcccc
Q 011842 210 KVDCLISGEI----DCADFKAKLLQNKDKPAIINVNIGTTVKGAV----DDLDLVIQTLEESGFTQDRFYIHCDGALFGL 281 (476)
Q Consensus 210 ~v~~~~~g~~----D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~i----d~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~ 281 (476)
..+...+... |+++|++.+.++++ +|+++...+++|.. +++++|.++|++||+ ++++|++|.++
T Consensus 145 ~~~~~~~~~~~~~~d~~~l~~~~~~~~~---~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~-----~~i~De~~~~~ 216 (379)
T TIGR00707 145 FEPLVPGFSYAPYNDIESLKKAIDDETA---AVIVEPIQGEGGVNPASAEFLKALREICKDKDA-----LLIFDEVQTGI 216 (379)
T ss_pred CCCCCCCceeeCCCCHHHHHHHhhhCee---EEEEEccccCCCCccCCHHHHHHHHHHHHHcCC-----EEEEeccccCC
Confidence 1222222221 89999999876543 67776666666654 348999999999999 99999999764
Q ss_pred cccccccCCCCCCc-ccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHH
Q 011842 282 MMPFVKKAPKVSFK-KPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNR 360 (476)
Q Consensus 282 ~~~~~~~~~~~~~~-~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~ 360 (476)
.... ...+ +... ...|.++ ++|.+++++++|+++.++++++.+...... .++. .+.......+++++.
T Consensus 217 ~~~g-~~~~-~~~~~~~~d~~t--~sK~~~~G~riG~~~~~~~~~~~~~~~~~~-----~~~~--~~~~~~~aa~aaL~~ 285 (379)
T TIGR00707 217 GRTG-KFFA-YEHYGIEPDIIT--LAKGLGGGVPIGATLAKEEVAEAFTPGDHG-----STFG--GNPLACAAALAVLEV 285 (379)
T ss_pred Cccc-hhhh-HHhcCCCCCEEE--EcccccCCcccEEEEEcHHHHhhhcCCCCC-----CCCC--CCHHHHHHHHHHHHH
Confidence 3211 1110 1111 1246554 579999889999999988876665321111 1111 111222333344444
Q ss_pred hChhcHHHHHHHHHHHHHHHHHHHHhcCCeEe---ecCCeeEEEEecCCc-HHHh-----hceeecc-cCCEEEEEEcCC
Q 011842 361 KGYKGFQKEVQKCLRNAHYLKDRLLDAGISAM---LNELSSTVVFERPQD-EEFV-----RRWQLAC-QGNIAHVVVMPN 430 (476)
Q Consensus 361 ~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~---~~~~~~iv~f~~~~~-~~~~-----~~~~l~~-~~~~lRv~~~~~ 430 (476)
+.. .+..++..+++++++++|++.+.... .++..+++.+..+++ .++. +++.+.. ..+.+|++++..
T Consensus 286 ~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~lRi~~~~~ 362 (379)
T TIGR00707 286 IEK---ERLLENVKEKGDYFKERLEELGKNYPNKEVRGKGLMLGIELEAPCKDIVKKALEKGLLVNCAGPKVLRFLPPLI 362 (379)
T ss_pred HHh---hhHHHHHHHHHHHHHHHHHHHHhhCCCCccccCceEEEEEecCcHHHHHHHHHHCCcEEeeCCCCEEEEECCCc
Confidence 322 34567777888888888877533211 122345555655432 3332 2333433 347899999888
Q ss_pred CCHHHHHHHHHHHHHH
Q 011842 431 VTIDKLDDFLNELIEN 446 (476)
Q Consensus 431 ~T~edid~~~~~l~~~ 446 (476)
+|.++|+++++.|+++
T Consensus 363 ~t~~~i~~~~~~l~~~ 378 (379)
T TIGR00707 363 ITKEEIDEAVSALEEA 378 (379)
T ss_pred CCHHHHHHHHHHHHHh
Confidence 9999999999999865
No 233
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.78 E-value=1.8e-16 Score=163.66 Aligned_cols=278 Identities=13% Similarity=0.058 Sum_probs=175.2
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhC-------C--CcEEEecCCCchHHHHHHHHc-----
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVF-------P--DGILYASRESHYSVFKAARMY----- 204 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~-------p--~~~Vl~s~~~H~S~~~~~~~~----- 204 (476)
+...++.+.++++.|.+ ..+++++||+||..|+.+++... + +.+|.++..-|.+...+....
T Consensus 83 ~~~~~l~~~l~~~~~~~----~~~~~~SGs~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~ 158 (401)
T PRK00854 83 DQLAPLYEELAALTGSH----KVLPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDA 158 (401)
T ss_pred HHHHHHHHHHHhhCCCC----EEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccc
Confidence 34455666677777764 28999999999999999997531 1 234555555565543332211
Q ss_pred -------CCeEEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC----HHHHHHHHHHhCCCCCceEEE
Q 011842 205 -------RMECVKVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD----LDLVIQTLEESGFTQDRFYIH 273 (476)
Q Consensus 205 -------G~~v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~----l~~I~~ia~~~g~~~~~~~lh 273 (476)
..++..+|.. |+++|++.+.+++ .+|+++.+.+++|.+.| +++|.++|++||+ +++
T Consensus 159 ~~~~~~~~~~~~~~~~~-----d~~~le~~i~~~~---~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi-----~lI 225 (401)
T PRK00854 159 RGGFGPFTPGFRVVPFG-----DAEALEAAITPNT---VAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNV-----TLI 225 (401)
T ss_pred cccCCCCCCCeEEeCCC-----CHHHHHHHhCCCe---EEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCC-----EEE
Confidence 1133444433 8999999997654 48889899999999987 9999999999999 999
Q ss_pred EecCcccccccccccCCCCCCc-ccccEEEEcCCCCCCCC-CCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhH
Q 011842 274 CDGALFGLMMPFVKKAPKVSFK-KPIGSVSVSGHKFVGCP-MPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAP 351 (476)
Q Consensus 274 vD~a~~g~~~~~~~~~~~~~~~-~~~Dsi~~s~hK~l~~p-~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~ 351 (476)
+|++|.++... ..... .... -..|.++++ |++..+ +++|+++.+++.++.+..... ..++.+ .+
T Consensus 226 ~DEv~~g~g~~-g~~~~-~~~~g~~~D~~~~~--K~l~gg~~~ig~v~~~~~~~~~l~~~~~-----~~t~~~-----~~ 291 (401)
T PRK00854 226 LDEIQTGLGRT-GKLLA-EEHEGIEADVTLIG--KALSGGFYPVSAVLSNSEVLGVLKPGQH-----GSTFGG-----NP 291 (401)
T ss_pred EechhhCCCCC-chHhH-HhhcCCCCCEEEec--ccccCCccCeEEEEEcHHHHhcccCCCC-----CCCCCc-----CH
Confidence 99999753221 11000 0000 125776664 888777 589999999887665532110 112221 23
Q ss_pred HHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCCeEe--ecCCeeEEEEec-CC---cHHHh-----hceeec-cc
Q 011842 352 IFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAM--LNELSSTVVFER-PQ---DEEFV-----RRWQLA-CQ 419 (476)
Q Consensus 352 l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~--~~~~~~iv~f~~-~~---~~~~~-----~~~~l~-~~ 419 (476)
+.+++++..+..-.-....++..+++++|.+.|++.+...+ ..+...++.|.. ++ ..++. ++..+. ..
T Consensus 292 ~~~aa~~a~L~~l~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~g~~~~i~~~~~~~~~~~~~~~L~~~GV~v~~~~ 371 (401)
T PRK00854 292 LACAVARAALKVLTEEGMIENAAEMGAYFLEGLRSIRSNIVREVRGRGLMLAVELEPEAGGARQYCEALKERGLLAKDTH 371 (401)
T ss_pred HHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhhccCceEEEeccceEEEEEEecCchhHHHHHHHHHHCCeEEecCC
Confidence 44444444432111123567788899999999988754322 122234444432 22 12222 223332 23
Q ss_pred CCEEEEEEcCCCCHHHHHHHHHHHHHHH
Q 011842 420 GNIAHVVVMPNVTIDKLDDFLNELIENR 447 (476)
Q Consensus 420 ~~~lRv~~~~~~T~edid~~~~~l~~~~ 447 (476)
.+.+|++++..+|+++||++++.|+++.
T Consensus 372 ~~~lR~~p~~~~t~e~i~~~i~~l~~~l 399 (401)
T PRK00854 372 DHTIRLAPPLVITREQVDWALEQIAKVL 399 (401)
T ss_pred CCEEEEeCCcccCHHHHHHHHHHHHHHh
Confidence 5789999999999999999999998765
No 234
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.78 E-value=1.2e-16 Score=164.48 Aligned_cols=212 Identities=13% Similarity=0.117 Sum_probs=155.9
Q ss_pred HHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchH----HHHHHHHcCCeEEEEeCCCCC
Q 011842 142 VGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYS----VFKAARMYRMECVKVDCLISG 217 (476)
Q Consensus 142 ~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S----~~~~~~~~G~~v~~v~~~~~g 217 (476)
+++.+.++++.|.+. .+++++|+.|+..++.+... ||+.|+++.+.|.. +...++..|++++.++.+
T Consensus 68 ~~le~~lA~l~g~~~----~i~~~sG~~Al~~~l~~ll~--~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~--- 138 (403)
T PRK07503 68 ALLEQRMASLEGGEA----AVALASGMGAITATLWTLLR--PGDEVIVDQTLYGCTFAFLHHGLGEFGVTVRHVDLT--- 138 (403)
T ss_pred HHHHHHHHHHhCCCc----EEEEcCHHHHHHHHHHHHcC--CCCEEEEccCccchHHHHHHHHHhhCCEEEEEeCCC---
Confidence 345566888888864 68888999998888876644 99999999987754 234566789999988875
Q ss_pred ccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCccc
Q 011842 218 EIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKP 297 (476)
Q Consensus 218 ~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~ 297 (476)
|++.|++++.++++ +|++.++++++|.+.|+++|+++|++||+ ++++|++|+.+... .+ + ...
T Consensus 139 --d~~~l~~~i~~~tk---lV~le~p~NPtG~~~di~~I~~la~~~gi-----~lIvD~a~a~~~~~----~~-l--~~g 201 (403)
T PRK07503 139 --DPAALKAAISDKTR---MVYFETPANPNMRLVDIAAVAEIAHGAGA-----KVVVDNTYCTPYLQ----RP-L--ELG 201 (403)
T ss_pred --CHHHHHHhcCccCc---EEEEeCCCCCCCeeeCHHHHHHHHHHcCC-----EEEEECCCcccccC----Cc-h--hhC
Confidence 89999999977665 78888999999999999999999999999 99999999754321 11 1 124
Q ss_pred ccEEEEcCCCCCCCCC--CceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHHH
Q 011842 298 IGSVSVSGHKFVGCPM--PCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLR 375 (476)
Q Consensus 298 ~Dsi~~s~hK~l~~p~--~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~ 375 (476)
+|+++.|++|+++++. ..|+++.++++.+.+.... + ....+.+ ...+..|..++ +.+.+..++++..+
T Consensus 202 ~Di~v~S~tK~l~g~gd~~gG~v~~~~~l~~~l~~~~-~-----~~~~g~~--~s~~~a~l~l~--~L~tl~~r~~~~~~ 271 (403)
T PRK07503 202 ADLVVHSATKYLGGHGDITAGLVVGGKALADRIRLEG-L-----KDMTGAV--MSPFDAFLLMR--GLKTLALRMDRHCA 271 (403)
T ss_pred CCEEEccccccccCCCceeEEEEEcCHHHHHHHHhhh-H-----HhCcCCC--CCHHHHHHHHc--CcchHHHHHHHHHH
Confidence 7999999999999653 3788886666655443110 0 0011222 23455555554 45677888888889
Q ss_pred HHHHHHHHHHhcCC
Q 011842 376 NAHYLKDRLLDAGI 389 (476)
Q Consensus 376 ~a~~l~~~L~~~g~ 389 (476)
++..+.+.|++.+.
T Consensus 272 na~~~a~~L~~~p~ 285 (403)
T PRK07503 272 SAQAVAEWLARHPA 285 (403)
T ss_pred HHHHHHHHHHhCCC
Confidence 99999999998764
No 235
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.77 E-value=8.5e-17 Score=166.59 Aligned_cols=219 Identities=16% Similarity=0.092 Sum_probs=155.1
Q ss_pred HHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchH----HHHHHHHcCCeEEEEeCCCC
Q 011842 141 EVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYS----VFKAARMYRMECVKVDCLIS 216 (476)
Q Consensus 141 e~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S----~~~~~~~~G~~v~~v~~~~~ 216 (476)
.+.+.+.++++.|.+. .++|++|+.|+..++.+... +|+.|+++...|.. +...++..|++++.++..
T Consensus 66 ~~~Le~~lA~leg~~~----al~~~sG~~Ai~~al~~ll~--~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd~~-- 137 (431)
T PRK08248 66 TDVFEKRIAALEGGIG----ALAVSSGQAAITYSILNIAS--AGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFVDPS-- 137 (431)
T ss_pred HHHHHHHHHHHhCCCc----EEEECCHHHHHHHHHHHHhC--CCCEEEEccCchhhHHHHHHHHHHhCCEEEEEECCC--
Confidence 3345556788888653 89999999999999887755 89999999988754 334567789999999874
Q ss_pred CccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCcc
Q 011842 217 GEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKK 296 (476)
Q Consensus 217 g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~ 296 (476)
|+++|+++|.++++ +|++++++|++|.+.|+++|+++|+++|+ ++++|++++..... .....
T Consensus 138 ---d~e~l~~ai~~~tk---lV~l~sp~NPtG~v~di~~I~~la~~~gi-----~vIvD~t~a~~~~~-------~pl~~ 199 (431)
T PRK08248 138 ---DPENFEAAITDKTK---ALFAETIGNPKGDVLDIEAVAAIAHEHGI-----PLIVDNTFASPYLL-------RPIEH 199 (431)
T ss_pred ---CHHHHHHhcCCCCe---EEEEECCCCCCCcccCHHHHHHHHHHcCC-----EEEEeCCCCccccC-------ChhHc
Confidence 89999999977654 78888999999999999999999999999 99999998743221 11223
Q ss_pred cccEEEEcCCCCCCCCC-CceeEEeehh-hh-h---h---h-cCCccc-----cC---------CC---CCcccCCCCCh
Q 011842 297 PIGSVSVSGHKFVGCPM-PCGVQITRME-HI-N---V---L-SSNVEY-----LA---------SR---DATIMGSRNGH 349 (476)
Q Consensus 297 ~~Dsi~~s~hK~l~~p~-~~G~l~~~~~-~~-~---~---l-~~~~~y-----l~---------~~---~~~~~~sr~~~ 349 (476)
++|+++.|+|||+++|. .+|.+++... .. . . + .....| .. .. .....|.. .
T Consensus 200 gaDivv~S~tK~lgg~g~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~--l 277 (431)
T PRK08248 200 GADIVVHSATKFIGGHGTSIGGVIVDSGKFDWKGSGKFPGLTEPDPSYHGLVYTDAVGEAAYITKARVQLLRDLGAA--L 277 (431)
T ss_pred CCCEEEEcCccccCCCCCceEEEEEeCCccccccccccccccCCccccccchhhhhhchhhHHHHHHHHHHHhcCCC--C
Confidence 49999999999999765 4777776432 11 0 0 0 000011 00 00 00011211 2
Q ss_pred hHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCC
Q 011842 350 APIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGI 389 (476)
Q Consensus 350 ~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~ 389 (476)
.+...|.. ..|.+.+..++++..+++..+.+.|++.+.
T Consensus 278 ~p~~a~l~--~rgl~tl~~R~~~~~~nA~~la~~L~~~p~ 315 (431)
T PRK08248 278 SPFNSFLL--LQGLETLHLRMERHSENALAVAKFLEEHEA 315 (431)
T ss_pred CHHHHHHH--hcCcCcHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 23444533 346677889999999999999999999864
No 236
>PRK08637 hypothetical protein; Provisional
Probab=99.77 E-value=1.8e-16 Score=162.91 Aligned_cols=299 Identities=14% Similarity=0.050 Sum_probs=185.0
Q ss_pred hhHHHHHHHHHHHHHHcC-CCCC-cccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHH-HHcCCeEEEEe
Q 011842 136 HSRQFEVGVLDWFARLWE-LENN-EYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAA-RMYRMECVKVD 212 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g-~~~~-~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~-~~~G~~v~~v~ 212 (476)
+..++++.+.+++.+..+ ..++ ...+++|+|+++++.+.+.+..+ |++.|++++++|..+...+ ...|++++.+|
T Consensus 45 G~~~lr~~ia~~~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~--~gd~Vlv~~P~y~~~~~~~~~~~g~~vv~v~ 122 (388)
T PRK08637 45 GIPELRDLWQEKMLRENPSLSGKKMSLPIVTNALTHGLSLVADLFVD--QGDTVLLPDHNWGNYKLTFNTRRGAEIVTYP 122 (388)
T ss_pred CCHHHHHHHHHHHhccCccccccccceeeEccchHHHHHHHHHHhcC--CCCEEEEcCCCCccHHHHHHHhcCCEEEEec
Confidence 345788888877766442 2221 13478999999999988887766 9999999999999988865 46899999999
Q ss_pred CC-CCCccCHHHHHHHHHcC-CCCcEEEEEeeCCCccccccC---HHHHHHHHHH-----hCCCCCceEEEEecCccccc
Q 011842 213 CL-ISGEIDCADFKAKLLQN-KDKPAIINVNIGTTVKGAVDD---LDLVIQTLEE-----SGFTQDRFYIHCDGALFGLM 282 (476)
Q Consensus 213 ~~-~~g~~D~~~Le~~l~~~-~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~-----~g~~~~~~~lhvD~a~~g~~ 282 (476)
+. +++.+|+++|++.++.. .+...+++++++.||||.+-+ +++|+++|++ |++ +|++|++|..+.
T Consensus 123 ~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~~~~~-----~iI~De~Y~~l~ 197 (388)
T PRK08637 123 IFDEDGGFDTDALKEALQAAYNKGKVIVILNFPNNPTGYTPTEKEATAIVEAIKELADAGTKV-----VAVVDDAYFGLF 197 (388)
T ss_pred ccCCCCcCCHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCcE-----EEEecccchhcc
Confidence 84 55679999999998721 112246777789999998854 6777777765 899 999999998766
Q ss_pred ccccccCCCC----CCcccccEEE-EcCCC-CCCCCCCceeEEeeh------hhhhhhcCCc-cccCCCCCcccCCCCCh
Q 011842 283 MPFVKKAPKV----SFKKPIGSVS-VSGHK-FVGCPMPCGVQITRM------EHINVLSSNV-EYLASRDATIMGSRNGH 349 (476)
Q Consensus 283 ~~~~~~~~~~----~~~~~~Dsi~-~s~hK-~l~~p~~~G~l~~~~------~~~~~l~~~~-~yl~~~~~~~~~sr~~~ 349 (476)
+......+.+ +..+++.++. .++.| ++.+++++||+++.. ++.+.+.... .+... +.. + .
T Consensus 198 ~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~~~~~~~~~~~~l~~~~~~~~~~~~~~---~~~-~---~ 270 (388)
T PRK08637 198 YEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFITFGTKAGSSQTVKEALEKKVKGLIRS---NIS-N---G 270 (388)
T ss_pred cCCccchhhHHHhhcccccceEEEeccccccCCCcccceEEEEEccccCCcHHHHHHHHHHHHHHhhc---ccC-C---C
Confidence 5332221111 1112333333 25555 788999999999753 4444442110 01100 000 1 1
Q ss_pred hHHHHHHHHHHhChhcHHHH----HHHHHHHHHHHHHHHHhcC---CeEeecCCeeEEE-EecCC--cHHHhh------c
Q 011842 350 APIFLWYTLNRKGYKGFQKE----VQKCLRNAHYLKDRLLDAG---ISAMLNELSSTVV-FERPQ--DEEFVR------R 413 (476)
Q Consensus 350 ~~l~~~~~l~~~g~~g~~~~----~~~~~~~a~~l~~~L~~~g---~~~~~~~~~~iv~-f~~~~--~~~~~~------~ 413 (476)
..+.+.++...+....+.+. .....++.+.+.+.|++.+ ...+.++.++.++ ++.+. +.++.+ +
T Consensus 271 s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~l~~~l~~~~g 350 (388)
T PRK08637 271 PHPSQSAVLRALNSPEFDKEKQEKFQILKERYEKTKEVLYDGKYDDAWQAYPFNSGYFMCLKLKGVDAEELRVHLLEKYG 350 (388)
T ss_pred CcHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccccccceEEEEecCChHHHHHHHHHHhhhcc
Confidence 13444455555433333333 3344555566677776652 2233344444444 45542 223322 2
Q ss_pred eee-cccCCEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Q 011842 414 WQL-ACQGNIAHVVVMPNVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 414 ~~l-~~~~~~lRv~~~~~~T~edid~~~~~l~~~~~~ 449 (476)
..+ ....+.+|+++.. .+.++++..++.|.++.+.
T Consensus 351 v~~~~~~~~~iRi~~~~-~~~~~i~~~~~~l~~~~~~ 386 (388)
T PRK08637 351 IGTIALNETDLRIAFSC-VEEEDIPELFDSIYKAIKD 386 (388)
T ss_pred eEEEeccCCceEEEeec-CCHHHHHHHHHHHHHHHHh
Confidence 222 2234679998875 6799999999999887764
No 237
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.77 E-value=2.8e-16 Score=158.17 Aligned_cols=266 Identities=11% Similarity=0.032 Sum_probs=179.3
Q ss_pred HHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCC
Q 011842 138 RQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISG 217 (476)
Q Consensus 138 ~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g 217 (476)
.++++++.+|+.+. ++++ .++++|+|+++++..++.+. +.|++.+++|..+..+++.+|++++.+|.++++
T Consensus 59 ~~Lr~aia~~~~~~-~~~~--~~i~it~Ga~~~i~~~~~~~------d~v~v~~P~y~~~~~~~~~~g~~~~~v~~~~~~ 129 (335)
T PRK14808 59 EELIEKILSYLDTD-FLSK--NNVSVGNGADEIIYVMMLMF------DRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKDL 129 (335)
T ss_pred HHHHHHHHHHhCCC-CCCc--ceEEEcCCHHHHHHHHHHHh------CcEEECCCCHHHHHHHHHHcCCeEEEecCCCcC
Confidence 47777777776553 2544 35999999999999887654 368888999999999999999999999998777
Q ss_pred ccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCccc
Q 011842 218 EIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKP 297 (476)
Q Consensus 218 ~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~ 297 (476)
.++... + ..+ .+++++++.|+||.+-+.+++.+++ ++++ ||++|++|..+... ...+.+...+.
T Consensus 130 ~~~~~~----~-~~~---~~i~i~nP~NPTG~~~s~~~l~~l~-~~~~-----~ii~DE~Y~~f~~~--~~~~~~~~~~~ 193 (335)
T PRK14808 130 RIPEVN----V-GEG---DVVFIPNPNNPTGHVFEREEIERIL-KTGA-----FVALDEAYYEFHGE--SYVDLLKKYEN 193 (335)
T ss_pred CCChhH----c-cCC---CEEEEeCCCCCCCCCcCHHHHHHHH-hcCC-----EEEEECchhhhcCC--chHHHHHhCCC
Confidence 665432 2 223 3777889999999999999999998 5788 99999999754211 11110111111
Q ss_pred ccEEEEcCCCCCC-CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhC-hhcHHHHHHHHHH
Q 011842 298 IGSVSVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKG-YKGFQKEVQKCLR 375 (476)
Q Consensus 298 ~Dsi~~s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g-~~g~~~~~~~~~~ 375 (476)
-+++.|+.|.++ +++++|++++++++++.+....... ..+ .+.++++...+. .+-+.+.++...+
T Consensus 194 -vi~~~S~SK~~~l~GlRvG~~v~~~~~~~~l~~~~~~~-------~~~-----~~~q~a~~~~l~~~~~~~~~~~~~~~ 260 (335)
T PRK14808 194 -LAVIRTFSKAFSLAAQRIGYVVSSEKFIDAYNRVRLPF-------NVS-----YVSQMFAKVALDHREIFEERTKFIVE 260 (335)
T ss_pred -EEEEEechhhccCcccceEEEEeCHHHHHHHHHhcCCC-------CCC-----HHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 246677889888 8999999999988776663322110 111 222333322221 2234556667777
Q ss_pred HHHHHHHHHHhcCCeEeecCCeeEEEEecCC-c-HHHh-----hceeecccCCEEEEEEcCCCCHHHHHHHHHHHHH
Q 011842 376 NAHYLKDRLLDAGISAMLNELSSTVVFERPQ-D-EEFV-----RRWQLACQGNIAHVVVMPNVTIDKLDDFLNELIE 445 (476)
Q Consensus 376 ~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~-~-~~~~-----~~~~l~~~~~~lRv~~~~~~T~edid~~~~~l~~ 445 (476)
.++++.+.|++.|+. +.++..+.+.+..+. + ..+. +++.+..-.+.+|+++ -+.++.++|+++|++
T Consensus 261 ~r~~l~~~L~~~g~~-~~~~~g~f~~~~l~~~~~~~~~~~l~~~Gi~V~~~~~~~Risi---~~~~~~~~~~~~l~~ 333 (335)
T PRK14808 261 ERERMKSALREMGYR-ITDSRGNFVFIFMEKEEKERLLEHLRAKNIAVRSFREGVRITI---GKREENDMILKELEV 333 (335)
T ss_pred HHHHHHHHHHHCCCE-ECCCCCeEEEEeCCCccHHHHHHHHHHCCeEEEECCCCeEEec---CCHHHHHHHHHHHHh
Confidence 788899999988854 445566676666653 2 2222 2333322236789887 457999999999875
No 238
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.77 E-value=4.2e-16 Score=158.56 Aligned_cols=275 Identities=12% Similarity=0.059 Sum_probs=179.9
Q ss_pred HHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCC
Q 011842 138 RQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISG 217 (476)
Q Consensus 138 ~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g 217 (476)
.+++++++++ ++++++ ++++|+|+++++...+.+. . +++.|++.+++|..+...++.+|++++.+|.+.++
T Consensus 60 ~~Lr~aia~~----~~v~~~--~I~it~G~~~~i~~~~~~l-~--~g~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~ 130 (360)
T PRK07392 60 RELRLALAQH----HQLPPE--WILPGNGAAELLTWAGREL-A--QLRAVYLITPAFGDYRRALRAFGATVKELPLPLDQ 130 (360)
T ss_pred HHHHHHHHHH----hCcChh--hEEECCCHHHHHHHHHHHh-C--CCCeEEEECCCcHHHHHHHHHcCCeEEEEeccccc
Confidence 3555555544 477654 5999999999998877664 2 66799999999999999999999999999997544
Q ss_pred c-----cCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCC
Q 011842 218 E-----IDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKV 292 (476)
Q Consensus 218 ~-----~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~ 292 (476)
. .|++.+++.. . .+.+++++++.|+||.+-+.++|.++++++++ +++|++|..+..+.. ..+..
T Consensus 131 ~~~~~~~~~~~~~~~~-~---~~~~~~l~nP~NPTG~~~~~~~l~~l~~~~~~------~IiDE~y~~~~~~~~-~~s~~ 199 (360)
T PRK07392 131 PSPGLTLRLQTLPPQL-T---PNDGLLLNNPHNPTGKLWSREAILPLLEQFAL------VVVDEAFMDFLPPDA-EQSLI 199 (360)
T ss_pred CCcccccCHHHHHHhc-c---CCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCE------EEEECchhhhccCcc-ccchH
Confidence 3 3555555432 2 23478888999999999999999999999975 566999987654321 11111
Q ss_pred CC-ccc-ccEEEEcCCCCCC-CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHH-H
Q 011842 293 SF-KKP-IGSVSVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQ-K 368 (476)
Q Consensus 293 ~~-~~~-~Dsi~~s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~-~ 368 (476)
.. ... --++..|+.|.++ .++++|++++++++++.+...... .+ ...+.++++...+....+. .
T Consensus 200 ~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~~~~~~~~~~~~~~~---------~~---~s~~~q~~~~~~l~~~~~~~~ 267 (360)
T PRK07392 200 PCLAEYPNLIILRSLTKFYSLPGLRLGYAIAHPDRLQRWQQWRDP---------WP---VNGLAAAAAIAALADRDFQQQ 267 (360)
T ss_pred HHhhcCCCEEEEEechhhhcCCchheeeeeCCHHHHHHHHhhCCC---------CC---CCHHHHHHHHHHhccHHHHHH
Confidence 11 111 1256678889887 899999999988876655321111 11 1235555555555333333 3
Q ss_pred HHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecCC-cHHHh----h--ceeec-c------cCCEEEEEEcCCCCHH
Q 011842 369 EVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERPQ-DEEFV----R--RWQLA-C------QGNIAHVVVMPNVTID 434 (476)
Q Consensus 369 ~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~-~~~~~----~--~~~l~-~------~~~~lRv~~~~~~T~e 434 (476)
..+...++++++.+.|+..+...+.++.++.+.+..+. ..++. + ++.+. . ..+++|+++. +.+
T Consensus 268 ~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~fl~~~~~~~~~~l~~~ll~~~gv~v~pg~~f~~~~~~~iRi~~~---~~~ 344 (360)
T PRK07392 268 TWAWLPPAREALFQGLASLPGLTPLPSAANFLLVQSQGSALQLQEKLLQQHRILIRDCLSFPELGDRYFRVAVR---TEA 344 (360)
T ss_pred HHHHHHHHHHHHHHHHHhCCCcEECCCCCCEEEEEcCCCHHHHHHHHHhhCCEEEEeCCCCCCCCCCEEEEEeC---CHH
Confidence 34556677888999998863333444556666666553 22222 2 23331 1 1368999984 456
Q ss_pred HHHHHHHHHHHHH
Q 011842 435 KLDDFLNELIENR 447 (476)
Q Consensus 435 did~~~~~l~~~~ 447 (476)
+.++|.++|+++.
T Consensus 345 ~~~~l~~al~~~~ 357 (360)
T PRK07392 345 ENQRLLEALAAIL 357 (360)
T ss_pred HHHHHHHHHHHHh
Confidence 6677877776654
No 239
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.77 E-value=1.8e-16 Score=164.04 Aligned_cols=220 Identities=14% Similarity=0.081 Sum_probs=153.9
Q ss_pred HHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHH----HHHHcCCeEEEEeCCCC
Q 011842 141 EVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFK----AARMYRMECVKVDCLIS 216 (476)
Q Consensus 141 e~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~----~~~~~G~~v~~v~~~~~ 216 (476)
.+++.+.++++.|.+. .+++++|+.|+..++.+... +|+.|+++...|.+... .+...|++++.++ +.
T Consensus 71 ~~~Le~~lA~l~g~~~----av~~sSG~aAi~~al~all~--~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vd-d~- 142 (436)
T PRK07812 71 QDVVEQRIAALEGGVA----ALLLASGQAAETFAILNLAG--AGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFVE-DP- 142 (436)
T ss_pred HHHHHHHHHHHhCCCe----EEEEccHHHHHHHHHHHHhC--CCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEEC-CC-
Confidence 3455666888888864 78999999999998887765 89999999988876543 3344688887775 22
Q ss_pred CccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCcc
Q 011842 217 GEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKK 296 (476)
Q Consensus 217 g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~ 296 (476)
.|++.+++++.++++ +|++.+++|++|.+.|+++|+++|++||+ +++||++++.+... .....
T Consensus 143 --~d~e~l~~ai~~~tk---lV~ie~~sNp~G~v~Dl~~I~~la~~~gi-----~liVD~t~a~~~~~-------~pl~~ 205 (436)
T PRK07812 143 --DDLDAWRAAVRPNTK---AFFAETISNPQIDVLDIPGVAEVAHEAGV-----PLIVDNTIATPYLI-------RPLEH 205 (436)
T ss_pred --CCHHHHHHhCCCCCe---EEEEECCCCCCCeecCHHHHHHHHHHcCC-----EEEEECCCcccccC-------Cchhc
Confidence 289999998877665 88899999999999999999999999999 99999998754432 11123
Q ss_pred cccEEEEcCCCCCCCCC-CceeEEeehhhh--hhh------cCCccccCC------C-C---------CcccCCCCChhH
Q 011842 297 PIGSVSVSGHKFVGCPM-PCGVQITRMEHI--NVL------SSNVEYLAS------R-D---------ATIMGSRNGHAP 351 (476)
Q Consensus 297 ~~Dsi~~s~hK~l~~p~-~~G~l~~~~~~~--~~l------~~~~~yl~~------~-~---------~~~~~sr~~~~~ 351 (476)
++|+++.|+|||++++. .+|.+++..... +.. ...++|... . . ....|.. ..+
T Consensus 206 GaDivv~S~tK~lgg~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~--l~p 283 (436)
T PRK07812 206 GADIVVHSATKYLGGHGTAIAGVIVDGGTFDWTQGRFPGFTTPDPSYHGVVFAELGPPAYALKARVQLLRDLGSA--ISP 283 (436)
T ss_pred CCCEEEEecccccCCCCCeEEEEEEcCCccccccccccccccCCcccccchhhhcchhHHHHHHHHHHHHhcCCC--CCH
Confidence 49999999999998542 255555543211 000 111222110 0 0 0001222 123
Q ss_pred HHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCC
Q 011842 352 IFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGI 389 (476)
Q Consensus 352 l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~ 389 (476)
...|. ...|.+.+..++++..++|..+.+.|++.+.
T Consensus 284 ~~a~l--~~rgl~tL~~R~~~~~~nA~~la~~L~~~p~ 319 (436)
T PRK07812 284 FNAFL--IAQGLETLSLRIERHVANAQRVAEFLEARDE 319 (436)
T ss_pred HHHHH--HhcCcCcHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 44443 3446788999999999999999999999864
No 240
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.77 E-value=1.1e-16 Score=162.85 Aligned_cols=263 Identities=14% Similarity=0.077 Sum_probs=176.3
Q ss_pred hHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHH----HHcCCeEEEEe
Q 011842 137 SRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAA----RMYRMECVKVD 212 (476)
Q Consensus 137 ~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~----~~~G~~v~~v~ 212 (476)
..++|+. ++++.+ . ..+++++|+.|+..++.+... ||+.|+++.+.|+.+...+ +..|++++.++
T Consensus 53 ~~~Le~~----lA~l~~--~---~~v~~~sG~~Ai~~~l~all~--~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~~v~~v~ 121 (366)
T PRK07582 53 WRALEAA----LGELEG--A---EALVFPSGMAAITAVLRALLR--PGDTVVVPADGYYQVRALAREYLAPLGVTVREAP 121 (366)
T ss_pred HHHHHHH----HHHHcC--C---CEEEECCHHHHHHHHHHHhcC--CCCEEEEeCCCcHhHHHHHHHHHhcCeEEEEEEC
Confidence 3455555 555552 2 277888889998888777644 8999999999997776544 34699999998
Q ss_pred CCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCC
Q 011842 213 CLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKV 292 (476)
Q Consensus 213 ~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~ 292 (476)
.++.+ + .+.++++ +|++.+++|++|.+.|+++|+++|+++|+ +++||++|+.... . . .+
T Consensus 122 ~~~~~-------~-~~~~~t~---lV~le~p~NPtg~v~di~~I~~~a~~~g~-----~lvVD~t~~~~~~---~-~-p~ 180 (366)
T PRK07582 122 TAGMA-------E-AALAGAD---LVLAETPSNPGLDVCDLAALAAAAHAAGA-----LLVVDNTTATPLG---Q-R-PL 180 (366)
T ss_pred CCChH-------H-HhccCce---EEEEECCCCCCCCccCHHHHHHHHHHcCC-----EEEEECCCCCccc---c-C-ch
Confidence 75321 1 2223443 78888999999999999999999999999 9999999853211 0 0 12
Q ss_pred CCcccccEEEEcCCCCCCCCCC--ceeEEeeh-hhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHH
Q 011842 293 SFKKPIGSVSVSGHKFVGCPMP--CGVQITRM-EHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKE 369 (476)
Q Consensus 293 ~~~~~~Dsi~~s~hK~l~~p~~--~G~l~~~~-~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~ 369 (476)
+ ..+|+++.|+|||++++.+ .|++++++ ++.+.+.....+. +.. ..++..|..++. .+.+..+
T Consensus 181 ~--~g~Divv~S~sK~l~G~~g~~~G~v~~~~~~l~~~l~~~~~~~--------g~~--~~~~~a~l~~r~--l~tl~~R 246 (366)
T PRK07582 181 E--LGADLVVASDTKALTGHSDLLLGYVAGRDPELMAAVERWRLLA--------GAI--PGPFEAWLAHRS--LGTLGLR 246 (366)
T ss_pred h--cCCcEEEecccccccCCCCeeEEEEEcCcHHHHHHHHHHHHHh--------CCC--CCHHHHHHHHhc--cccHHHH
Confidence 2 2479999999999987665 68888764 4444443222222 111 124556655544 4567888
Q ss_pred HHHHHHHHHHHHHHHHhcCCeE-ee-c-----C-----------CeeEEEEecCCcH---HHhhceeec-----------
Q 011842 370 VQKCLRNAHYLKDRLLDAGISA-ML-N-----E-----------LSSTVVFERPQDE---EFVRRWQLA----------- 417 (476)
Q Consensus 370 ~~~~~~~a~~l~~~L~~~g~~~-~~-~-----~-----------~~~iv~f~~~~~~---~~~~~~~l~----------- 417 (476)
+++..+++..+.+.|++.+... +. | | ...+++|...+.+ .+.+.+.+.
T Consensus 247 ~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~~~~~~~~~~~~l~~~~~~~s~G~~~s 326 (366)
T PRK07582 247 FARQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELADAAAAERFVAASRLVVAATSFGGVHT 326 (366)
T ss_pred HHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeCCHHHHHHHHHhCCcceecccCCCccc
Confidence 8999999999999999986432 22 1 2 2467888875422 233333221
Q ss_pred -----------ccCCEEEEEEcCCCCHHHHHHHHHHHHH
Q 011842 418 -----------CQGNIAHVVVMPNVTIDKLDDFLNELIE 445 (476)
Q Consensus 418 -----------~~~~~lRv~~~~~~T~edid~~~~~l~~ 445 (476)
...+.+|+++....+++.|+.|.++|.+
T Consensus 327 l~~~~~~~~~~~~~~liR~svGlE~~~dli~dl~~al~~ 365 (366)
T PRK07582 327 SADRRARWGDAVPEGFVRLSCGIEDTDDLVADLERALDA 365 (366)
T ss_pred hhhhHHHcCCCCCCCeEEEEeccCCHHHHHHHHHHHHhh
Confidence 0125789999988877777777777653
No 241
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.77 E-value=9e-17 Score=166.30 Aligned_cols=222 Identities=14% Similarity=0.065 Sum_probs=154.0
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHH----HHHHHcCCeEEEEeCC
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVF----KAARMYRMECVKVDCL 214 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~----~~~~~~G~~v~~v~~~ 214 (476)
...+++.+.++++.|.+. .+++++|+.|+..++.+... +|++|+++...|.+.. ..+...|++++.++ +
T Consensus 69 pt~~~le~~la~l~g~~~----~v~fsSG~~Ai~~al~~ll~--~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~vd-~ 141 (437)
T PRK05613 69 PTVEALENRIASLEGGVH----AVAFASGQAAETAAILNLAG--AGDHIVTSPRLYGGTETLFLVTLNRLGIEVTFVE-N 141 (437)
T ss_pred hHHHHHHHHHHHHhCCCe----EEEeCCHHHHHHHHHHHhcC--CCCEEEECCCccHHHHHHHHHHHHhcCeEEEEEC-C
Confidence 445566677888888753 77888888999887776643 8999999999998763 44566799999997 3
Q ss_pred CCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCC
Q 011842 215 ISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSF 294 (476)
Q Consensus 215 ~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~ 294 (476)
.. |+++|+++|.++++ +|++.+.++++|.+.|+++|+++|+++|+ +++||++++.+... .. +
T Consensus 142 ~~---d~e~l~~~l~~~tk---~V~~e~~~Np~~~v~di~~I~~la~~~gi-----~livD~t~a~g~~~--~p---~-- 203 (437)
T PRK05613 142 PD---DPESWQAAVQPNTK---AFFGETFANPQADVLDIPAVAEVAHRNQV-----PLIVDNTIATAALV--RP---L-- 203 (437)
T ss_pred CC---CHHHHHHhCCccCe---EEEEECCCCCCCcccCHHHHHHHHHHcCC-----eEEEECCCcccccc--Ch---H--
Confidence 22 89999999987765 67777889999999999999999999999 99999998754331 10 1
Q ss_pred cccccEEEEcCCCCCCCC-CCceeEEe-ehhhh-hhhc---CCccccCCCCC------------------------cccC
Q 011842 295 KKPIGSVSVSGHKFVGCP-MPCGVQIT-RMEHI-NVLS---SNVEYLASRDA------------------------TIMG 344 (476)
Q Consensus 295 ~~~~Dsi~~s~hK~l~~p-~~~G~l~~-~~~~~-~~l~---~~~~yl~~~~~------------------------~~~~ 344 (476)
..++|+++.|+|||++++ -+.|.+++ +.+.. .... ....++...+. ...|
T Consensus 204 ~~GaDivv~S~~K~l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 283 (437)
T PRK05613 204 ELGADVVVASLTKFYTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYFVTPDPAYHGLKYADLGAPAFGLKARAGLLRDTG 283 (437)
T ss_pred HhCCCEEEeeccceecCCCcceeEEEEecCcccccccccccccCCCCCCCccccccccccccchHHHHHHHHHHHHHhcC
Confidence 124899999999999853 23455555 33210 0000 00000000000 0011
Q ss_pred CCCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCC
Q 011842 345 SRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGI 389 (476)
Q Consensus 345 sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~ 389 (476)
.. ..+...|..+ .|.+.+..++++..++|..+.+.|++.+.
T Consensus 284 ~~--~~p~~a~l~~--rgl~TL~lR~~~~~~nA~~lA~~L~~hp~ 324 (437)
T PRK05613 284 AT--LSPFNAWVTA--QGLDTLSLRLERHNENAIKVAEFLNNHEK 324 (437)
T ss_pred CC--CCHHHHHHHH--cccCcHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 11 2234455433 46678899999999999999999999874
No 242
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.77 E-value=3.2e-16 Score=161.49 Aligned_cols=278 Identities=14% Similarity=0.072 Sum_probs=175.6
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhh--------CCCcE-EEecCCCchHHHHHHHHcCC---
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREV--------FPDGI-LYASRESHYSVFKAARMYRM--- 206 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~--------~p~~~-Vl~s~~~H~S~~~~~~~~G~--- 206 (476)
+...++.+.++++.+.+ ..+++++||+||..|+.++|.. ..+.. |..+...|.+...+..+.+.
T Consensus 82 ~~~~~l~~~l~~~~~~~----~~~~~~SGseA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~ 157 (396)
T PRK04073 82 DQLGPWYEKVAKLTGKD----MVLPMNTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEY 157 (396)
T ss_pred HHHHHHHHHHHhcCCCC----eEEEcCChHHHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCccc
Confidence 34455667777777653 3899999999999999999753 12244 44545566555555444432
Q ss_pred ---------eEEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC----HHHHHHHHHHhCCCCCceEEE
Q 011842 207 ---------ECVKVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD----LDLVIQTLEESGFTQDRFYIH 273 (476)
Q Consensus 207 ---------~v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~----l~~I~~ia~~~g~~~~~~~lh 273 (476)
.+..+|.+ |+++|++.+.+++ .+|+++.+.+++|.+.| +++|.++|++||+ +++
T Consensus 158 ~~~~~~~~~~~~~~~~~-----d~~~l~~~i~~~~---~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~-----lli 224 (396)
T PRK04073 158 KRGFGPMLPGIKKIPYG-----DLEALKAAITPNT---AAFLVEPIQGEAGINIPPEGFLKAARELCKEENV-----LFI 224 (396)
T ss_pred ccCCCCCCCCceEeCCC-----CHHHHHHhcccCe---EEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCC-----EEE
Confidence 12334433 7899999886544 47888888899999865 8999999999999 999
Q ss_pred EecCcccccccccccCCCCCCcc-cccEEEEcCCCCCCCC-CCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhH
Q 011842 274 CDGALFGLMMPFVKKAPKVSFKK-PIGSVSVSGHKFVGCP-MPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAP 351 (476)
Q Consensus 274 vD~a~~g~~~~~~~~~~~~~~~~-~~Dsi~~s~hK~l~~p-~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~ 351 (476)
+|++|.++... ..... .+... ..|.+++ .|.++.+ +++|+++.++++.+.+..... ..++.+ .+
T Consensus 225 ~DEv~~g~g~~-g~~~~-~~~~~~~pdi~~~--sK~lg~gg~~ig~~~~~~~i~~~~~~~~~-----~~t~~~-----~~ 290 (396)
T PRK04073 225 ADEIQTGLGRT-GKLFA-CDWDNVTPDMYIL--GKALGGGVFPISCVAANRDILGVFTPGSH-----GSTFGG-----NP 290 (396)
T ss_pred EecchhCCCcC-cHHHH-hhhcCCCCCEEEe--cccccCCCCcceEEEEcHHHHhhhcCCCC-----CCCCCC-----CH
Confidence 99999864321 11100 11111 2677765 4887766 899999999887765532111 112222 23
Q ss_pred HHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCCeEe--ecCCeeEEEEecCC-cHHHh-----hceee-cccCCE
Q 011842 352 IFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAM--LNELSSTVVFERPQ-DEEFV-----RRWQL-ACQGNI 422 (476)
Q Consensus 352 l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~--~~~~~~iv~f~~~~-~~~~~-----~~~~l-~~~~~~ 422 (476)
+.+++++..+..-.-....++..++.++|.+.|++.+...+ ..+..+++.+..+. ...+. ++..+ +...+.
T Consensus 291 ~~~aaa~aaL~~~~~~~l~~~~~~~~~~l~~~L~~l~~~~i~~~~~~g~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~ 370 (396)
T PRK04073 291 LACAVSIAALEVLEEEKLPERSLELGEYFKEQLKEIDNPMIKEVRGRGLFIGVELNEPARPYCEALKEEGLLCKETHETV 370 (396)
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhhcCCcccceecceEEEEEEecchHHHHHHHHHHCCeEEecCCCCE
Confidence 44444444432100123556677789999999988643212 22334555555443 22232 23333 233478
Q ss_pred EEEEEcCCCCHHHHHHHHHHHHHHH
Q 011842 423 AHVVVMPNVTIDKLDDFLNELIENR 447 (476)
Q Consensus 423 lRv~~~~~~T~edid~~~~~l~~~~ 447 (476)
+|++.+..+|+|+||+++++|+++.
T Consensus 371 iRi~p~l~~t~e~i~~~~~~l~~~l 395 (396)
T PRK04073 371 IRFAPPLVITKEELDWAFEKIKAVL 395 (396)
T ss_pred EEEECCcccCHHHHHHHHHHHHHHh
Confidence 9999988899999999999998763
No 243
>PRK07505 hypothetical protein; Provisional
Probab=99.77 E-value=6.4e-16 Score=159.56 Aligned_cols=281 Identities=12% Similarity=0.031 Sum_probs=173.0
Q ss_pred HHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhh----CCCcEEEecCCCchHHHH--HHHHcCCeEEEE
Q 011842 138 RQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREV----FPDGILYASRESHYSVFK--AARMYRMECVKV 211 (476)
Q Consensus 138 ~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~----~p~~~Vl~s~~~H~S~~~--~~~~~G~~v~~v 211 (476)
.+...++++.+++++|. . .+++++|++|+..++..++.. .++.+|+.+...|.|+.. .....+.+++.+
T Consensus 90 ~~~~~~l~~~la~~~~~-~----~~~~~sG~~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~~~~~v~~~ 164 (402)
T PRK07505 90 SQILKDLEEALSELFGA-S----VLTFTSCSAAHLGILPLLASGHLTGGVPPHMVFDKNAHASLNILKGICADETEVETI 164 (402)
T ss_pred hHHHHHHHHHHHHHhCC-C----EEEECChHHHHHHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhhcCCeEEEe
Confidence 46778888899999986 2 666778889999888765431 133467777788988743 222245678888
Q ss_pred eCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCccc-ccccccccC-
Q 011842 212 DCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFG-LMMPFVKKA- 289 (476)
Q Consensus 212 ~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g-~~~~~~~~~- 289 (476)
|.+ |+++|++++.++++ +++++.|.+++|.+.|+++|.++|++||+ ++++|++|+. ++.+.....
T Consensus 165 ~~~-----d~~~l~~~~~~~~~---~~vl~~p~~~~G~~~~~~~i~~l~~~~~~-----~li~DEa~~~~~~g~~g~~~~ 231 (402)
T PRK07505 165 DHN-----DLDALEDICKTNKT---VAYVADGVYSMGGIAPVKELLRLQEKYGL-----FLYIDDAHGLSIYGKNGEGYV 231 (402)
T ss_pred CCC-----CHHHHHHHHhcCCC---EEEEEecccccCCcCCHHHHHHHHHHcCC-----EEEEECcccccCcCCCCCchH
Confidence 875 89999999876543 67777888999999999999999999999 9999999852 222222111
Q ss_pred -CCCCC-cccccEEEEcCCCCCCCCCCceeEEe-ehhhhhhhcC-CccccCCCCCcccCCCCChhHHHHHHHHHHhChhc
Q 011842 290 -PKVSF-KKPIGSVSVSGHKFVGCPMPCGVQIT-RMEHINVLSS-NVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKG 365 (476)
Q Consensus 290 -~~~~~-~~~~Dsi~~s~hK~l~~p~~~G~l~~-~~~~~~~l~~-~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g 365 (476)
..+.. .....+++.++.|.++.+ .|++++ +++..+.+.. ...| ++.++.+........+++..+..+.
T Consensus 232 ~~~~~~~~~d~~i~~~s~sK~~~~~--Gg~~~~~~~~~~~~~~~~~~~~------t~~~~~~~~a~aa~~a~l~~~~~~~ 303 (402)
T PRK07505 232 RSELDYRLNERTIIAASLGKAFGAS--GGVIMLGDAEQIELILRYAGPL------AFSQSLNVAALGAILASAEIHLSEE 303 (402)
T ss_pred HHHcCCCCCCCeEEEEechhhhhcc--CeEEEeCCHHHHHHHHHhCCCc------eeCCCCCHHHHHHHHHHHHHHhccC
Confidence 01121 112346667888988754 377665 4455555432 1112 2333333222333444454444445
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecCC---cHHHh-----hceeecc--------cCCEEEEEEcC
Q 011842 366 FQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERPQ---DEEFV-----RRWQLAC--------QGNIAHVVVMP 429 (476)
Q Consensus 366 ~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~---~~~~~-----~~~~l~~--------~~~~lRv~~~~ 429 (476)
+.+..+++.++.+.+.+.+... .......+..+..+. ...+. +++.+.. ..+.+|+++..
T Consensus 304 ~~~~~~~l~~~~~~~~~~~~~~----~~g~~~~i~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~lRi~~~~ 379 (402)
T PRK07505 304 LDQLQQKLQNNIALFDSLIPTE----QSGSFLPIRLIYIGDEDTAIKAAKQLLDRGFYTSPVFFPVVAKGRAGLRIMFRA 379 (402)
T ss_pred cHHHHHHHHHHHHHHHHHHHhc----CCCCCCCEEEEEeCCHHHHHHHHHHHHHCCCeEeeecCCCCCCCCceEEEecCc
Confidence 5555555555555444332211 011222333332222 12221 2333321 23689999999
Q ss_pred CCCHHHHHHHHHHHHHHHH
Q 011842 430 NVTIDKLDDFLNELIENRS 448 (476)
Q Consensus 430 ~~T~edid~~~~~l~~~~~ 448 (476)
.+|++|+++++++|+++.+
T Consensus 380 ~~t~eei~~~~~~l~~~l~ 398 (402)
T PRK07505 380 SHTNDEIKRLCSLLKEILD 398 (402)
T ss_pred cCCHHHHHHHHHHHHHHHH
Confidence 9999999999999988764
No 244
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.77 E-value=4.1e-16 Score=156.69 Aligned_cols=263 Identities=13% Similarity=-0.012 Sum_probs=174.6
Q ss_pred HHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccCHH
Q 011842 143 GVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCA 222 (476)
Q Consensus 143 ~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~~ 222 (476)
.+++.+++.+|.+ ++++|+|+++++...+.+ .||+.|++.+++|..+...++.+|++++.||.+
T Consensus 53 ~Lr~~ia~~~~~~----~I~it~Gs~~al~~~~~~----~~gd~v~v~~P~y~~~~~~~~~~g~~~~~v~~~-------- 116 (330)
T PRK05664 53 GLEAAARAYYGAP----QLLPVAGSQAAIQALPRL----RAPGRVGVLSPCYAEHAHAWRRAGHQVRELDEA-------- 116 (330)
T ss_pred HHHHHHHHHhCCC----CEEECcCHHHHHHHHHHc----cCCCEEEEcCCChHHHHHHHHHcCCeEEEechh--------
Confidence 3445566666753 399999999998766432 389999999999999999999999999999763
Q ss_pred HHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCccc-c
Q 011842 223 DFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKP-I 298 (476)
Q Consensus 223 ~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~-~ 298 (476)
++++.+. +++ ++++++|+|+||.+-+ +++|+++|+++++ +|++|++|..+. +. .+....... -
T Consensus 117 ~~~~~~~-~~~---~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~-----~iI~DE~y~~~~-~~---~s~~~~~~~~~ 183 (330)
T PRK05664 117 EVEAALD-SLD---VLVVVNPNNPTGRRFDPARLLAWHARLAARGG-----WLVVDEAFMDNT-PQ---HSLAACAHRPG 183 (330)
T ss_pred hHhhhhc-CCC---EEEEeCCcCCCCCccCHHHHHHHHHHHHhcCC-----EEEEECCcccCC-Cc---ccccccccCCC
Confidence 4555553 344 6777789999999966 5666677789999 999999996442 11 111111111 1
Q ss_pred cEEEEcCCCCCC-CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhCh-hcHHHHHHHHHHH
Q 011842 299 GSVSVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGY-KGFQKEVQKCLRN 376 (476)
Q Consensus 299 Dsi~~s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~-~g~~~~~~~~~~~ 376 (476)
-++..|+.|.++ +++++|+++++.++++.+.....+. ..+ .+.++++...+.. .-.++..++..++
T Consensus 184 vi~~~SfSK~~gl~GlRiG~~v~~~~l~~~~~~~~~~~-------~~~-----~~~~~~~~~~L~~~~~~~~~~~~~~~~ 251 (330)
T PRK05664 184 LIVLRSFGKFFGLAGARLGFVLAEPALLRALAELLGPW-------TVS-----GPTRWLAQAALADTPWQRRQRERLLAA 251 (330)
T ss_pred EEEEeeccccccCCCcceEEEEeCHHHHHHHHHhcCCC-------CCC-----HHHHHHHHHHHhChHHHHHHHHHHHHH
Confidence 256788899886 8999999999887766653221110 111 2333333333322 2245566777788
Q ss_pred HHHHHHHHHhcCCeEeecCCeeEEEEecCCcHHHhh-----ceeecc--cCCEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Q 011842 377 AHYLKDRLLDAGISAMLNELSSTVVFERPQDEEFVR-----RWQLAC--QGNIAHVVVMPNVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 377 a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~~~~~~~-----~~~l~~--~~~~lRv~~~~~~T~edid~~~~~l~~~~~~ 449 (476)
++++.+.|++.++. ......+.+.++.++..++.+ ++.+.. ..+.+|+++.. +.+++++|+++|+++.++
T Consensus 252 r~~l~~~L~~~~~~-~~~~~~~f~~~~~~~~~~~~~~l~~~gi~v~~f~~~~~iRis~~~--~~~~~~~l~~al~~~~~~ 328 (330)
T PRK05664 252 SQRLAALLRRHGLT-PAGGCALFQWVRTEDAAALHEFLARRGILTRLFEQPASLRFGLPA--DEADWARLDQALLAYRKE 328 (330)
T ss_pred HHHHHHHHHHCCCc-ccCCcceEEEEecCCHHHHHHHHHHCCeEEEECCCCCeEEEECCC--CHHHHHHHHHHHHHHHhh
Confidence 99999999988752 111122455555554433322 333321 34689998864 789999999999887654
No 245
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.76 E-value=1.4e-15 Score=153.32 Aligned_cols=272 Identities=16% Similarity=0.082 Sum_probs=198.6
Q ss_pred HHHHHHHHcC-CCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccCHH
Q 011842 144 VLDWFARLWE-LENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCA 222 (476)
Q Consensus 144 ~~~~la~l~g-~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~~ 222 (476)
+.+.+++.+| .+. ..+++++|+++.+...+++.+. ||+.|++..+++..+...++..|++++.+|.++ +.+|++
T Consensus 62 l~~a~a~~~~~~~~--~~V~~gnGsde~i~~l~~~~~~--~gd~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~~-~~~d~~ 136 (356)
T COG0079 62 LRAALAEYYGVVDP--ENVLVGNGSDELIELLVRAFVE--PGDTVLIPEPTFSMYEIAAQLAGAEVVKVPLKE-FRLDLD 136 (356)
T ss_pred HHHHHHHHhCCCCc--ceEEEcCChHHHHHHHHHHhhc--CCCEEEEcCCChHHHHHHHHhcCCeEEEecccc-cccCHH
Confidence 3344566677 443 3477899999999988888887 899999999999999999999999999999987 999999
Q ss_pred HHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHh--CCCCCceEEEEecCcccccccccccCCCCCCc-ccc-
Q 011842 223 DFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEES--GFTQDRFYIHCDGALFGLMMPFVKKAPKVSFK-KPI- 298 (476)
Q Consensus 223 ~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~--g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~-~~~- 298 (476)
.+.+.+.++++ +|++++|.|+||..-+.++|.++++.. +. ++++|+||.-+.-+. . .... ..-
T Consensus 137 ~~~~~~~~~~~---lv~i~nPNNPTG~~~~~~~l~~l~~~~~~~~-----~vVvDEAY~eF~~~~--~---~~l~~~~~n 203 (356)
T COG0079 137 AILAAIRDKTK---LVFLCNPNNPTGTLLPREELRALLEALPEGG-----LVVIDEAYIEFSPES--S---LELLKYPPN 203 (356)
T ss_pred HHHHhhhcCCC---EEEEeCCCCCCCCCCCHHHHHHHHHhCCCCc-----EEEEeCchhhcCCch--h---hhhccCCCC
Confidence 99999988655 888999999999999888888888864 66 999999986543311 1 1111 111
Q ss_pred cEEEEcCCC-CCCCCCCceeEEeehhhhhhhcC-CccccCCCCCcccCCCCChhHHHHHHHHHHhCh-hcHHHHHHHHHH
Q 011842 299 GSVSVSGHK-FVGCPMPCGVQITRMEHINVLSS-NVEYLASRDATIMGSRNGHAPIFLWYTLNRKGY-KGFQKEVQKCLR 375 (476)
Q Consensus 299 Dsi~~s~hK-~l~~p~~~G~l~~~~~~~~~l~~-~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~-~g~~~~~~~~~~ 375 (476)
-++.=++.| |..++.++|+.+.++++++.+.. ..+|- ...+++.++..++.. +-+++.+++..+
T Consensus 204 livlRTfSKa~gLAGlRlGy~ia~~~~i~~l~~vr~p~~-------------v~~~a~~aa~aal~~~~~~~~~~~~~~~ 270 (356)
T COG0079 204 LIVLRTFSKAFGLAGLRVGYAIANPELIAALNKVRPPFN-------------VSSPALAAAIAALRDADYLEESVERIRE 270 (356)
T ss_pred EEEEEecHHhhhcchhceeeccCCHHHHHHHHHhcCCCC-------------CCHHHHHHHHHHcccHHHHHHHHHHHHH
Confidence 255667778 55789999999999888776643 22331 112444444444422 456778888889
Q ss_pred HHHHHHHHHHhcCCeEeecCCeeEEEEecCCcH--HHhh-----ceee-cc-----cCCEEEEEEcCCCCHHHHHHHHHH
Q 011842 376 NAHYLKDRLLDAGISAMLNELSSTVVFERPQDE--EFVR-----RWQL-AC-----QGNIAHVVVMPNVTIDKLDDFLNE 442 (476)
Q Consensus 376 ~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~~~--~~~~-----~~~l-~~-----~~~~lRv~~~~~~T~edid~~~~~ 442 (476)
.++++.+.|+..|+..+.+..+|.+.++.+... .+.+ ++.+ .+ ..+++||++ =|+|+.++|+++
T Consensus 271 ~r~rl~~~l~~~~~~~v~pS~aNFvlv~~~~~~~~~l~~~L~~~giivR~~~~~~~~~~~lRitv---gt~een~~ll~A 347 (356)
T COG0079 271 ERERLYAALKALGLFGVFPSQANFVLVRVPDAEAAALAEALLKKGILVRDCSSVGLLPGYLRITV---GTPEENDRLLAA 347 (356)
T ss_pred HHHHHHHHHHhCCCCeecCCCCcEEEEECCCccHHHHHHHHHHCCEEEEeCCCCCCCCCeEEEEe---CCHHHHHHHHHH
Confidence 999999999999844366666899988886411 2222 2222 12 135899988 478888999999
Q ss_pred HHHHHHH
Q 011842 443 LIENRST 449 (476)
Q Consensus 443 l~~~~~~ 449 (476)
|+++.+.
T Consensus 348 L~~~~~~ 354 (356)
T COG0079 348 LREVLKG 354 (356)
T ss_pred HHHHHhc
Confidence 9887653
No 246
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.76 E-value=9.5e-17 Score=162.93 Aligned_cols=227 Identities=14% Similarity=0.116 Sum_probs=156.9
Q ss_pred hHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHc-C-CeEEEEeCC
Q 011842 137 SRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMY-R-MECVKVDCL 214 (476)
Q Consensus 137 ~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~-G-~~v~~v~~~ 214 (476)
..++|+. ++++.|.+. +++++||++|+..++. +.. ||++|+++...|..-....... . ..+. +
T Consensus 56 ~~~le~~----lA~leg~~~----~v~~~sG~aAi~~~l~-~l~--~GD~VI~~~~~yg~~~~~~~~~~~~~~~~-~--- 120 (364)
T PRK07269 56 RAKLEET----LAAIESADY----ALATSSGMSAIVLAFS-VFP--VGSKVVAVRDLYGGSFRWFNQQEKEGRFH-F--- 120 (364)
T ss_pred HHHHHHH----HHHHhCCCe----EEEeCCHHHHHHHHHH-HhC--CCCEEEEecCCcCchHHHHHHHHhcCcEE-E---
Confidence 4455555 666667543 8999999999998874 333 8999999887764433222111 0 0111 1
Q ss_pred CCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCC
Q 011842 215 ISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSF 294 (476)
Q Consensus 215 ~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~ 294 (476)
++..|+++++++|+++++ +|++++++|++|.+.|+++|+++|+++|+ ++++|++|+..+.. . ..
T Consensus 121 -~~~~d~~~l~~~i~~~Tk---lV~lesP~NPtg~~~di~~I~~la~~~gi-----~vvvD~t~~~~~~~----~---pl 184 (364)
T PRK07269 121 -TYANTEEELIAAIEEDTD---IVYIETPTNPLMVEFDIEKVAKLAHAKGA-----KVIVDNTFYSPIYQ----R---PI 184 (364)
T ss_pred -EecCCHHHHHHhcCcCce---EEEEECCCCCCCeeeCHHHHHHHHHHcCC-----EEEEECCCcccccC----C---ch
Confidence 123489999999987776 88899999999999999999999999999 99999998654321 1 11
Q ss_pred cccccEEEEcCCCCCCCCCC--ceeEEeehh-hhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHH
Q 011842 295 KKPIGSVSVSGHKFVGCPMP--CGVQITRME-HINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQ 371 (476)
Q Consensus 295 ~~~~Dsi~~s~hK~l~~p~~--~G~l~~~~~-~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~ 371 (476)
...+|+++.|++|+++++.. .|+++++++ +.+.+.....+ .|.. ..++..|..+. +.+.+..+++
T Consensus 185 ~~gaDivv~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~~~~~--------~G~~--~s~~~a~l~~~--~L~tL~~r~~ 252 (364)
T PRK07269 185 ELGADIVLHSATKYLSGHNDVLAGVVVTNDLELYEKLFYNLNT--------TGAV--LSPFDSYLLMR--GLKTLSLRME 252 (364)
T ss_pred hhCCcEEEecCceeccCCCcccceEEEeCcHHHHHHHHHHHHH--------hCCC--CCHHHHHHHHc--CCCcHHHHHH
Confidence 23489999999999987665 677777654 44443211111 1211 23456665554 4567899999
Q ss_pred HHHHHHHHHHHHHHhcCC-eEe-ecCCeeEEEEecCC
Q 011842 372 KCLRNAHYLKDRLLDAGI-SAM-LNELSSTVVFERPQ 406 (476)
Q Consensus 372 ~~~~~a~~l~~~L~~~g~-~~~-~~~~~~iv~f~~~~ 406 (476)
+..+++.++.+.|++.+. ..+ .|+...+++|....
T Consensus 253 ~~~~na~~~a~~L~~~p~v~~v~ypg~gg~~sf~~~~ 289 (364)
T PRK07269 253 RSTANAQEVVAFLKKSPAVKEVLYTGKGGMISFKVAD 289 (364)
T ss_pred HHHHHHHHHHHHHHhCCCccEEeCCCcCcEEEEEECC
Confidence 999999999999998763 333 45667788887643
No 247
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.76 E-value=4.9e-16 Score=160.42 Aligned_cols=288 Identities=10% Similarity=-0.011 Sum_probs=179.6
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCC---------
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRM--------- 206 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~--------- 206 (476)
+..++++++++++.+. ++++ .++++|+|+++++... ..... +++.|+++.++|..+...++..|+
T Consensus 76 g~~~lr~aia~~~~~~-~~~~--d~I~it~Ga~~al~~l-~~l~~--~gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~ 149 (402)
T TIGR03542 76 GYPFLREAIAENDYRG-RIDP--EEIFISDGAKCDVFRL-QSLFG--SDNTVAVQDPVYPAYVDSNVMAGRAGVLDDDGR 149 (402)
T ss_pred CCHHHHHHHHHHHHhc-CCCH--HHEEECCCcHHHHHHH-HHhcC--CCCEEEEeCCCCcchHHHHHHcCCccccccccc
Confidence 5678888888875332 4554 3599999999998764 33333 889999999999999999999999
Q ss_pred --eEEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCcccc
Q 011842 207 --ECVKVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGL 281 (476)
Q Consensus 207 --~v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~ 281 (476)
+++.+|+++++.++++ +++ .+ ++.+|++++++|+||.+-+ +++|+++|++|++ +|++|++|..+
T Consensus 150 ~~~~~~v~~~~~~~~~~~-~~~--~~---~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~-----~iI~De~y~~~ 218 (402)
T TIGR03542 150 YSKITYLPCTKENNFIPD-LPE--EP---KIDIIYLCSPNNPTGTVLTKEQLKELVDYANEHGS-----LILFDAAYSAF 218 (402)
T ss_pred cceEEEeecchhhCCCCC-ccc--cC---CceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCe-----EEEEEchhhhh
Confidence 9999998644333332 111 12 2347777899999999976 8889999999999 99999999865
Q ss_pred cccccccCCCCCCcc--cccEEEEcCCCCC-CCCCCceeEEeehhhhhhhcC--CccccCCCCCcccCCCCChhHHHHHH
Q 011842 282 MMPFVKKAPKVSFKK--PIGSVSVSGHKFV-GCPMPCGVQITRMEHINVLSS--NVEYLASRDATIMGSRNGHAPIFLWY 356 (476)
Q Consensus 282 ~~~~~~~~~~~~~~~--~~Dsi~~s~hK~l-~~p~~~G~l~~~~~~~~~l~~--~~~yl~~~~~~~~~sr~~~~~l~~~~ 356 (476)
........+...... ...+++.|+.|.+ ..++++|+++++++++..... ...+......+.. + ...+.+.+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~pGlRiG~~i~~~~l~~~~~~~~~~~~~~~~~~~~~-~---~s~~~q~~ 294 (402)
T TIGR03542 219 ISDPSLPHSIFEIPGAKECAIEFRSFSKTAGFTGVRLGWTVVPKELTYADGHSVIQDWERRQCTKFN-G---ASYPVQRA 294 (402)
T ss_pred ccCCCCCcchhhCCCCcccEEEEecCccccCCCCcceEEEEecHHHhhcchhhHHHHHHHHhhhccc-C---CCHHHHHH
Confidence 432211111111111 1234567889988 488999999998776411000 0000000000000 1 11234444
Q ss_pred HHHHhCh---hcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecCC---cHHHhh------ceee-cc-----
Q 011842 357 TLNRKGY---KGFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERPQ---DEEFVR------RWQL-AC----- 418 (476)
Q Consensus 357 ~l~~~g~---~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~---~~~~~~------~~~l-~~----- 418 (476)
+...+.. ..+++.++.+.++++++.+.|++.++....+..++.+.+..+. +.++.+ +..+ +.
T Consensus 295 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~f~~v~l~~~~~~~~l~~~l~~~~gv~v~pg~~f~~ 374 (402)
T TIGR03542 295 AEAAYAGEGLQPILEAISYYMENARILRKALEAAGFKVYGGEHAPYLWVKTPEGISSWDFFDFLLYQYHVVGTPGSGFGP 374 (402)
T ss_pred HHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHhcCceecCCCceeEEEEECCCCCCHHHHHHHHHHhCCEEEeCchhhCC
Confidence 3333322 2244556667788888999998887543333356667777653 223221 2333 11
Q ss_pred -cCCEEEEEEcCCCCHHHHHHHHHHHHHH
Q 011842 419 -QGNIAHVVVMPNVTIDKLDDFLNELIEN 446 (476)
Q Consensus 419 -~~~~lRv~~~~~~T~edid~~~~~l~~~ 446 (476)
..+++|+++.. ++++++..++.|+++
T Consensus 375 ~~~~~iRis~~~--~~~~l~~~l~~l~~~ 401 (402)
T TIGR03542 375 SGEGFVRFSAFG--KRENIVEACERIKEA 401 (402)
T ss_pred CCCCEEEEEecC--CHHHHHHHHHHHHhh
Confidence 13689998643 788888888877653
No 248
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.76 E-value=3.4e-16 Score=156.50 Aligned_cols=282 Identities=16% Similarity=0.088 Sum_probs=190.8
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCC
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLI 215 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~ 215 (476)
...++|++ +++++|... .+.+++||.|+.++++++- ..|||+||++..++.+-..++-+.|++++.|++|+
T Consensus 35 ~v~~FE~~----~ae~~G~k~----ava~~sgT~AL~laL~al~-ig~GDeVI~ps~TfvATan~i~~~Ga~PVFvDid~ 105 (374)
T COG0399 35 FVRRFEQA----FAEYLGVKY----AVAVSSGTAALHLALLALA-IGPGDEVIVPSFTFVATANAVLLVGAKPVFVDIDP 105 (374)
T ss_pred HHHHHHHH----HHHHhCCCe----EEEecChHHHHHHHHHhcC-CCCCCEEEecCCchHHHHHHHHHcCCeEEEEecCC
Confidence 45566665 778889886 8999999999999998543 45999999999999999999999999999999995
Q ss_pred -CCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCC
Q 011842 216 -SGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSF 294 (476)
Q Consensus 216 -~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~ 294 (476)
++.||++.||++|+++++ .|++.+- .|..-|+++|.++|++||+ +|+.|+||+.+..-..+.. +
T Consensus 106 ~T~nid~~~ie~aIt~~tK---AIipVhl---~G~~~dm~~i~~la~~~~l-----~vIEDaAqa~Ga~y~gk~v----G 170 (374)
T COG0399 106 DTLNIDPDLIEAAITPRTK---AIIPVHL---AGQPCDMDAIMALAKRHGL-----PVIEDAAQAHGATYKGKKV----G 170 (374)
T ss_pred cccCCCHHHHHHHcccCCe---EEEEehh---ccCCCCHHHHHHHHHHcCC-----eEEEEcchhccCeecCccc----c
Confidence 589999999999998876 5555443 3888899999999999999 9999999985432222221 1
Q ss_pred ccc-ccEEEEcCCCCCCCCCCceeEEeehh-hhhh---hcC---C----ccccCCCCCcccCCCCChhHHHHHHHHHHhC
Q 011842 295 KKP-IGSVSVSGHKFVGCPMPCGVQITRME-HINV---LSS---N----VEYLASRDATIMGSRNGHAPIFLWYTLNRKG 362 (476)
Q Consensus 295 ~~~-~Dsi~~s~hK~l~~p~~~G~l~~~~~-~~~~---l~~---~----~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g 362 (476)
.-+ +-++++.+.|.+.++ ..|+++++++ +.+. +.. . ..|.. ...|..... -.+-+++-...
T Consensus 171 t~Gd~~~fSF~~~K~ittg-EGGav~tnd~ela~k~~~lr~hG~~~~~~~~y~~----~~~G~N~rm--~~iqAAigl~Q 243 (374)
T COG0399 171 SFGDIGAFSFHATKNLTTG-EGGAVVTNDEELAEKARSLRNHGLSRDAVFKYLH----EELGYNYRL--TEIQAAIGLAQ 243 (374)
T ss_pred cccceEEEEecCCCCcccc-CceEEEeCCHHHHHHHHHHHHhCcCCCcccccee----eecccccCH--HHHHHHHHHHH
Confidence 112 566777788999987 7788888876 3322 211 1 12221 111221111 22233333334
Q ss_pred hhcHHHHHHHHHHHHHHHHHHHHhcCCeEeec-CC---e--eEEEEecCCc----HHHh----hc-----ee-ec-----
Q 011842 363 YKGFQKEVQKCLRNAHYLKDRLLDAGISAMLN-EL---S--STVVFERPQD----EEFV----RR-----WQ-LA----- 417 (476)
Q Consensus 363 ~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~-~~---~--~iv~f~~~~~----~~~~----~~-----~~-l~----- 417 (476)
.+.+++..++-.+++++..+.|++.+...+.. +. + .......+.. +.+. .. .. .+
T Consensus 244 L~~l~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~~~~~i~~~~~~~~R~~l~~~L~~~gi~~~~~~~P~~~~~ 323 (374)
T COG0399 244 LERLDEINERRREIAQIYAEALKGLPGITLPPEPDGAVHAWHLYTILVDEEGISRDALMESLKEAGVGAVVYFRPLHLQP 323 (374)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCceeeeeeeEEEecCCCCCHHHHHHHHHhCCCCceEEeeccccch
Confidence 56778888888999999999999875322221 11 1 1111222211 1111 11 00 00
Q ss_pred --------------c----cCCEEEEEEcCCCCHHHHHHHHHHHHHHHH
Q 011842 418 --------------C----QGNIAHVVVMPNVTIDKLDDFLNELIENRS 448 (476)
Q Consensus 418 --------------~----~~~~lRv~~~~~~T~edid~~~~~l~~~~~ 448 (476)
. ....+.+=++|..|.+|+++++++|+++..
T Consensus 324 ~~~~~~~~~~~~lp~ae~~~~r~l~LP~~p~l~~~~~~~V~~~l~~~~~ 372 (374)
T COG0399 324 AYRQLGYFPEGDLPNAEDLSERILSLPLHPNLSEEDVDRVIEALKEVLG 372 (374)
T ss_pred hhhcccccccCCCchHHHHhhCeEEccCCCCCCHHHHHHHHHHHHHHhc
Confidence 0 024566668999999999999999988764
No 249
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.76 E-value=1.8e-16 Score=161.88 Aligned_cols=211 Identities=14% Similarity=0.137 Sum_probs=152.2
Q ss_pred HHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHH----HHHHHcCCeEEEEeCCC
Q 011842 140 FEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVF----KAARMYRMECVKVDCLI 215 (476)
Q Consensus 140 le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~----~~~~~~G~~v~~v~~~~ 215 (476)
...++.+.++++.|.+. .+++++|+.++..++ .... ||+.|+++.+.|.+.. ..+...|++++.++..
T Consensus 51 ~~~~Le~~lA~l~g~~~----~~~~~sG~aai~~~~-~~l~--~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~- 122 (377)
T PRK07671 51 TRAALEELIAVLEGGHA----GFAFGSGMAAITAVM-MLFS--SGDHVILTDDVYGGTYRVMTKVLNRFGIEHTFVDTS- 122 (377)
T ss_pred HHHHHHHHHHHHhCCCc----eEEeCCHHHHHHHHH-HHhC--CCCEEEECCCccchHHHHHHHHHhcCCeEEEEECCC-
Confidence 34456666888888764 577888877665543 3433 8999999999887433 2345578999888754
Q ss_pred CCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCc
Q 011842 216 SGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFK 295 (476)
Q Consensus 216 ~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~ 295 (476)
|+++|++++.++++ +|++++++|++|.+.|+++|.++|+++|+ ++++|++|+..... .. + .
T Consensus 123 ----d~~~l~~ai~~~tk---lV~le~P~NPtg~~~dl~~I~~la~~~g~-----~lvvD~a~~~~~~~--~p---~--~ 183 (377)
T PRK07671 123 ----NLEEVEEAIRPNTK---AIYVETPTNPLLKITDIKKISTIAKEKGL-----LTIVDNTFMTPYWQ--SP---I--S 183 (377)
T ss_pred ----CHHHHHHhcCCCCe---EEEEECCCCCCCcccCHHHHHHHHHHcCC-----EEEEECCCCccccC--Ch---h--h
Confidence 89999999987765 88889999999999999999999999999 99999999754332 10 1 1
Q ss_pred ccccEEEEcCCCCCCCCCC--ceeEEeehh-hhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHHH
Q 011842 296 KPIGSVSVSGHKFVGCPMP--CGVQITRME-HINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQK 372 (476)
Q Consensus 296 ~~~Dsi~~s~hK~l~~p~~--~G~l~~~~~-~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~ 372 (476)
..+|+++.|++||+++|.. .|+++++++ +.+.+.....+. ++. ..+...|..++ +.+.+..++++
T Consensus 184 ~g~Divv~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~~~~~~~--------g~~--~~~~~a~l~~~--~l~tl~~R~~~ 251 (377)
T PRK07671 184 LGADIVLHSATKYLGGHSDVVAGLVVVNSPELAEDLHFVQNST--------GGI--LGPQDSWLLLR--GLKTLGIRMEE 251 (377)
T ss_pred hCCeEEEecCcccccCCccceeEEEEeCcHHHHHHHHHHHHhh--------cCC--CCHHHHHHHHc--CcChHHHHHHH
Confidence 2479999999999997753 566777654 444443222222 111 22455565554 45667788999
Q ss_pred HHHHHHHHHHHHHhcCC
Q 011842 373 CLRNAHYLKDRLLDAGI 389 (476)
Q Consensus 373 ~~~~a~~l~~~L~~~g~ 389 (476)
..+++..+.+.|++.+.
T Consensus 252 ~~~na~~la~~L~~~~~ 268 (377)
T PRK07671 252 HETNSRAIAEFLNNHPA 268 (377)
T ss_pred HHHHHHHHHHHHHcCCC
Confidence 99999999999998764
No 250
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.76 E-value=1.8e-16 Score=164.34 Aligned_cols=218 Identities=16% Similarity=0.114 Sum_probs=154.0
Q ss_pred HHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHH----HHHHHcCCeEEEEeCCCCC
Q 011842 142 VGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVF----KAARMYRMECVKVDCLISG 217 (476)
Q Consensus 142 ~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~----~~~~~~G~~v~~v~~~~~g 217 (476)
.++.+.++++.|.+. .+++++|+.|+..++.+... ||+.|+++...|.+.. ..+...|++++.++.+
T Consensus 66 ~~le~~lA~l~g~~~----al~~~SG~~Ai~~al~all~--pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~--- 136 (427)
T PRK05994 66 AVLEERVAALEGGTA----ALAVASGHAAQFLVFHTLLQ--PGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADAD--- 136 (427)
T ss_pred HHHHHHHHHHhCCCc----EEEEcCHHHHHHHHHHHHhC--CCCEEEEecCcchhHHHHHHHHHHhcCcEEEEECCC---
Confidence 345556788888764 78999999999999888765 9999999999987543 4466789999998864
Q ss_pred ccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCccc
Q 011842 218 EIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKP 297 (476)
Q Consensus 218 ~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~ 297 (476)
|++++++++.++++ +|++++++|++|.+.|+++|+++|++||+ ++++|++|+.++.. .....+
T Consensus 137 --d~~~l~~ai~~~tk---lV~vesp~NptG~v~dl~~I~~la~~~gi-----~livD~a~a~~~~~-------~pl~~g 199 (427)
T PRK05994 137 --DPASFERAITPRTK---AIFIESIANPGGTVTDIAAIAEVAHRAGL-----PLIVDNTLASPYLI-------RPIEHG 199 (427)
T ss_pred --CHHHHHHhcCcCCe---EEEEECCCCCCCeecCHHHHHHHHHHcCC-----EEEEECCccccccC-------CccccC
Confidence 89999999977665 88888999999999999999999999999 99999999754332 111234
Q ss_pred ccEEEEcCCCCCCCCCC-ceeEEeehhhhhhh-cCCccccCCCCC-------------------------cccCCCCChh
Q 011842 298 IGSVSVSGHKFVGCPMP-CGVQITRMEHINVL-SSNVEYLASRDA-------------------------TIMGSRNGHA 350 (476)
Q Consensus 298 ~Dsi~~s~hK~l~~p~~-~G~l~~~~~~~~~l-~~~~~yl~~~~~-------------------------~~~~sr~~~~ 350 (476)
+|+++.|+|||++.+.+ .|.+++......-. .+...++...+. ...|.. ..
T Consensus 200 aDivv~S~tK~lgg~~~~~gG~v~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~--~~ 277 (427)
T PRK05994 200 ADIVVHSLTKFLGGHGNSMGGIIVDGGTFDWSKSGKYPMLSEPRPEYHGLVLHETFGNFAFAIAARVLGLRDLGPA--IS 277 (427)
T ss_pred CcEEEEcCccccCCCCCcEEEEEEeCCccccccccccccccCCcchhhhhhHHHHhhhhhhHHHHHHHHHHhcCCC--CC
Confidence 99999999999996543 45555532110000 000011111000 001111 12
Q ss_pred HHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCC
Q 011842 351 PIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGI 389 (476)
Q Consensus 351 ~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~ 389 (476)
++..|. -..|.+.+..++++..+++.++.+.|++.+.
T Consensus 278 ~~~A~l--~~~~l~tL~~r~~~~~~~a~~la~~L~~~p~ 314 (427)
T PRK05994 278 PFNAFL--ILTGIETLPLRMQRHSDNALAVAEWLKGHPK 314 (427)
T ss_pred HHHHHH--HHcCcccHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 334443 3345678899999999999999999999864
No 251
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.76 E-value=2.6e-17 Score=147.80 Aligned_cols=164 Identities=24% Similarity=0.165 Sum_probs=130.2
Q ss_pred HHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHH-HHHHHcCCeEEEEeCCCCCccC
Q 011842 142 VGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVF-KAARMYRMECVKVDCLISGEID 220 (476)
Q Consensus 142 ~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~-~~~~~~G~~v~~v~~~~~g~~D 220 (476)
.+++++++++++.+. .++++++|||+|+..++.+++. +++.|++++..|.+.. ..++..|++++.++.+.++..+
T Consensus 3 ~~~~~~l~~~~~~~~--~~~~~~~~~t~a~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~ 78 (170)
T cd01494 3 EELEEKLARLLQPGN--DKAVFVPSGTGANEAALLALLG--PGDEVIVDANGHGSRYWVAAELAGAKPVPVPVDDAGYGG 78 (170)
T ss_pred HHHHHHHHHHcCCCC--CcEEEeCCcHHHHHHHHHHhCC--CCCEEEEeecccceehhhHHHhcCCEEEEeccCCCCccc
Confidence 356677888886432 3589999999999999988865 6889999999999988 8888999999999987654433
Q ss_pred H--HHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCc-cc
Q 011842 221 C--ADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFK-KP 297 (476)
Q Consensus 221 ~--~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~-~~ 297 (476)
. +.+++... +.+|.+++++++++++|...|+++|.++|+++|+ ++|+|++|+++...... ++.. ..
T Consensus 79 ~~~~~~~~~~~--~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~-----~li~D~a~~~~~~~~~~----~~~~~~~ 147 (170)
T cd01494 79 LDVAILEELKA--KPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGI-----LLLVDAASAGGASPAPG----VLIPEGG 147 (170)
T ss_pred hhhhhhhhccc--cCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCC-----EEEEecccccccccccc----ccccccc
Confidence 3 24444322 3456789999999999999999999999999999 99999999877654321 1222 34
Q ss_pred ccEEEEcCCCCCCCCCCceeEEee
Q 011842 298 IGSVSVSGHKFVGCPMPCGVQITR 321 (476)
Q Consensus 298 ~Dsi~~s~hK~l~~p~~~G~l~~~ 321 (476)
+|+++.|+|||+++ .++|++++|
T Consensus 148 ~d~~~~s~~K~~~~-~~~G~l~~~ 170 (170)
T cd01494 148 ADVVTFSLHKNLGG-EGGGVVIVK 170 (170)
T ss_pred CCEEEEEcccccCC-CceEEEEeC
Confidence 89999999999997 899999875
No 252
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.76 E-value=3.7e-16 Score=159.65 Aligned_cols=210 Identities=15% Similarity=0.136 Sum_probs=150.3
Q ss_pred HHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHH----HHHHHHcCCeEEEEeCCCC
Q 011842 141 EVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSV----FKAARMYRMECVKVDCLIS 216 (476)
Q Consensus 141 e~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~----~~~~~~~G~~v~~v~~~~~ 216 (476)
...+.+.++++.|.+. .+++++|+.|+..++ .+.. ||+.|+++++.|.+. ...+...|++++.++..
T Consensus 52 ~~~Le~~la~l~g~~~----al~~~SG~~Al~~~l-~~l~--pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~vd~~-- 122 (380)
T PRK06176 52 RFALEELIADLEGGVK----GFAFASGLAGIHAVF-SLFQ--SGDHVLLGDDVYGGTFRLFDKVLVKNGLSCTIIDTS-- 122 (380)
T ss_pred HHHHHHHHHHHhCCCC----EEEECCHHHHHHHHH-HHcC--CCCEEEEcCCChhHHHHHHHHHHHhcCeEEEEcCCC--
Confidence 3445566888888764 677888888876544 4443 999999999888654 34456678888888764
Q ss_pred CccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCcc
Q 011842 217 GEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKK 296 (476)
Q Consensus 217 g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~ 296 (476)
|++++++++.++++ +|+++++++++|.+.|+++|+++|++||+ ++++|++|+..+.. + ....
T Consensus 123 ---d~e~l~~ai~~~t~---lV~lesP~Nptg~~~di~~I~~la~~~gi-----~vivD~t~a~~~~~--~-----p~~~ 184 (380)
T PRK06176 123 ---DLSQIKKAIKPNTK---ALYLETPSNPLLKITDLAQCASVAKDHGL-----LTIVDNTFATPYYQ--N-----PLLL 184 (380)
T ss_pred ---CHHHHHHhcCcCce---EEEEECCCCCCceecCHHHHHHHHHHcCC-----EEEEECCccccccC--C-----cccc
Confidence 89999999977665 88889999999999999999999999999 99999999754332 1 1122
Q ss_pred cccEEEEcCCCCCCCCCC--ceeEEeehh-hhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHH
Q 011842 297 PIGSVSVSGHKFVGCPMP--CGVQITRME-HINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKC 373 (476)
Q Consensus 297 ~~Dsi~~s~hK~l~~p~~--~G~l~~~~~-~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~ 373 (476)
.+|+++.|++||+++|.. .|+++.+++ +.+.+.....++ +.. ..+...|..+ .|.+.+..++++.
T Consensus 185 gaDivv~S~tK~l~g~~d~~gG~vv~~~~~~~~~~~~~~~~~--------G~~--~~~~~~~l~~--~gl~tl~~R~~~~ 252 (380)
T PRK06176 185 GADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQEIAFFQNAI--------GGV--LGPQDSWLLQ--RGIKTLGLRMEAH 252 (380)
T ss_pred CCCEEEecCceeccCCccceeeEEEecHHHHHHHHHHHHHHh--------cCC--CCHHHHHHHH--hccCcHHHHHHHH
Confidence 489999999999987653 676777654 333332111111 110 1133445443 3567778889999
Q ss_pred HHHHHHHHHHHHhcCC
Q 011842 374 LRNAHYLKDRLLDAGI 389 (476)
Q Consensus 374 ~~~a~~l~~~L~~~g~ 389 (476)
.+++..+.+.|++.+.
T Consensus 253 ~~~a~~la~~L~~~p~ 268 (380)
T PRK06176 253 QKNALCVAEFLEKHPK 268 (380)
T ss_pred HHHHHHHHHHHHhCCC
Confidence 9999999999998764
No 253
>PRK05939 hypothetical protein; Provisional
Probab=99.76 E-value=4.1e-16 Score=160.04 Aligned_cols=217 Identities=16% Similarity=0.052 Sum_probs=152.3
Q ss_pred HHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchH---HHHHHHHcCCeEEEEeCCCCCc
Q 011842 142 VGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYS---VFKAARMYRMECVKVDCLISGE 218 (476)
Q Consensus 142 ~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S---~~~~~~~~G~~v~~v~~~~~g~ 218 (476)
+++.+.++++.|.+. .+++++|+.|+..++.+... ||+.|++++..|.+ +...++..|++++.++..
T Consensus 50 ~~lE~~la~leg~~~----~v~~ssG~~Ai~~~l~all~--~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~~---- 119 (397)
T PRK05939 50 AALEAKITKMEGGVG----TVCFATGMAAIAAVFLTLLR--AGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMVDAT---- 119 (397)
T ss_pred HHHHHHHHHHhCCCe----EEEeCCHHHHHHHHHHHHcC--CCCEEEECCCccccHHHHHHHHHhcCCEEEEECCC----
Confidence 344455778888764 67777889999888877755 99999999987653 445567789999999874
Q ss_pred cCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCcc-c
Q 011842 219 IDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKK-P 297 (476)
Q Consensus 219 ~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~-~ 297 (476)
|+++|++++.++++ +|++++++|++|.+.|+++|+++|+++|+ ++++|++|+.+.. ++..+ +
T Consensus 120 -d~e~l~~~l~~~tk---lV~vesp~NptG~v~dl~~I~~la~~~gi-----~livD~t~a~~~~--------~~~~~~g 182 (397)
T PRK05939 120 -DVQNVAAAIRPNTR---MVFVETIANPGTQVADLAGIGALCRERGL-----LYVVDNTMTSPWL--------FRPKDVG 182 (397)
T ss_pred -CHHHHHHhCCCCCe---EEEEECCCCCCCCHHhHHHHHHHHHHcCC-----EEEEECCcccccc--------cCccccC
Confidence 89999999977665 88889999999999999999999999999 9999999865422 11112 4
Q ss_pred ccEEEEcCCCCCCC-CCCceeEEeehhhhhh---hcCCccccCCC--C----------CcccCCCCChhHHHHHHHHHHh
Q 011842 298 IGSVSVSGHKFVGC-PMPCGVQITRMEHINV---LSSNVEYLASR--D----------ATIMGSRNGHAPIFLWYTLNRK 361 (476)
Q Consensus 298 ~Dsi~~s~hK~l~~-p~~~G~l~~~~~~~~~---l~~~~~yl~~~--~----------~~~~~sr~~~~~l~~~~~l~~~ 361 (476)
+|++..|++||+++ +..+|++++.+..... ......|.... . ....|+. ..+...|..+ .
T Consensus 183 aDivv~S~sK~~~g~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~--~~p~~a~l~~--r 258 (397)
T PRK05939 183 ASLVINSLSKYIAGHGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQWGLTQIRKKGLRDMGAT--LSSEAAHRIA--I 258 (397)
T ss_pred CEEEEecCeecccCCCCeEEEEEecCcccccccccchhhhhhccchhhHHHHHHHHHHHHhcCCC--CCHHHHHHHH--c
Confidence 89999999999985 4555666554221100 00000000000 0 0011222 2234455443 4
Q ss_pred ChhcHHHHHHHHHHHHHHHHHHHHhcCC
Q 011842 362 GYKGFQKEVQKCLRNAHYLKDRLLDAGI 389 (476)
Q Consensus 362 g~~g~~~~~~~~~~~a~~l~~~L~~~g~ 389 (476)
|.+.+..++++..+++..+.+.|++.+.
T Consensus 259 gl~tl~~R~~~~~~na~~la~~L~~~p~ 286 (397)
T PRK05939 259 GAETLALRVDRSCSNALALAQFLEAHPK 286 (397)
T ss_pred CcCcHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 6788899999999999999999999874
No 254
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.76 E-value=4e-16 Score=159.00 Aligned_cols=214 Identities=10% Similarity=0.014 Sum_probs=157.6
Q ss_pred HHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHH----HHHHcCCeEEEEeC
Q 011842 138 RQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFK----AARMYRMECVKVDC 213 (476)
Q Consensus 138 ~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~----~~~~~G~~v~~v~~ 213 (476)
....+.+.+.++.+-+.+. .+++++|+.|+..++.+..+ ||+.|+++++.|.++.. .++.+|+++..++.
T Consensus 63 nPt~~~Le~~la~le~~~~----~v~~sSG~aAi~~~l~all~--~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd~ 136 (395)
T PRK05967 63 TPTTDALCKAIDALEGSAG----TILVPSGLAAVTVPFLGFLS--PGDHALIVDSVYYPTRHFCDTMLKRLGVEVEYYDP 136 (395)
T ss_pred ChHHHHHHHHHHHHhCCCC----EEEECcHHHHHHHHHHHhcC--CCCEEEEccCCcHHHHHHHHHHHHhcCeEEEEeCC
Confidence 3555667777887776442 67888899999988877765 99999999999988764 45777999988865
Q ss_pred CCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCC
Q 011842 214 LISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVS 293 (476)
Q Consensus 214 ~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~ 293 (476)
+ +.+.+++++.++++ +|.+++++|+++.+.||++|+++|+++|+ +++||++|+..+.. +. ++
T Consensus 137 ~-----~~e~l~~al~~~Tk---lV~lesPsNP~l~v~dl~~I~~la~~~g~-----~vvVD~t~a~p~~~--~p---l~ 198 (395)
T PRK05967 137 E-----IGAGIAKLMRPNTK---VVHTEAPGSNTFEMQDIPAIAEAAHRHGA-----IVMMDNTWATPLYF--RP---LD 198 (395)
T ss_pred C-----CHHHHHHhcCcCce---EEEEECCCCCCCcHHHHHHHHHHHHHhCC-----EEEEECCccCceec--Ch---hH
Confidence 3 45789999987775 89999999999999999999999999999 99999999764321 10 11
Q ss_pred CcccccEEEEcCCCCCCCC--CCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHH
Q 011842 294 FKKPIGSVSVSGHKFVGCP--MPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQ 371 (476)
Q Consensus 294 ~~~~~Dsi~~s~hK~l~~p--~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~ 371 (476)
-++|++..|..||+++- .-.|++..+++..+.+.... . ..|+- ..+...|..+ .|.+.+.-+++
T Consensus 199 --~GaDivv~S~tKy~~Gh~d~~~G~v~~~~~~~~~l~~~~-~-------~~G~~--~~p~da~l~~--rgl~Tl~lR~~ 264 (395)
T PRK05967 199 --FGVDISIHAATKYPSGHSDILLGTVSANEKCWPQLLEAH-G-------TLGLC--AGPDDTYQIL--RGLRTMGIRLE 264 (395)
T ss_pred --cCCCEEEEecccccCCCCCeeEEEEEcCHHHHHHHHHHH-H-------HcCCC--CCHHHHHHHH--cCcccHHHHHH
Confidence 24999999999997631 12566665655433331110 0 11221 2345566444 46678899999
Q ss_pred HHHHHHHHHHHHHHhcCC
Q 011842 372 KCLRNAHYLKDRLLDAGI 389 (476)
Q Consensus 372 ~~~~~a~~l~~~L~~~g~ 389 (476)
+..+++..+.+.|++.+.
T Consensus 265 ~~~~na~~lA~~L~~hp~ 282 (395)
T PRK05967 265 HHRKSALEIARWLEGRPD 282 (395)
T ss_pred HHHHHHHHHHHHHHhCCC
Confidence 999999999999999864
No 255
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.75 E-value=1.2e-15 Score=157.35 Aligned_cols=281 Identities=14% Similarity=0.083 Sum_probs=177.5
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhC--------CCcEEEecCCC-chHHHHHHHHcCC---
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVF--------PDGILYASRES-HYSVFKAARMYRM--- 206 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~--------p~~~Vl~s~~~-H~S~~~~~~~~G~--- 206 (476)
....++.+.+++++|.+. .+++++|++||..|+..++... .+..|++.+.+ |.+...+..+.|-
T Consensus 79 ~~~~~l~~~l~~~~~~~~----~~~~~SGs~A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~ 154 (401)
T TIGR01885 79 DVFGEFAEYVTKLFGYDK----VLPMNTGAEAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDS 154 (401)
T ss_pred HHHHHHHHHHHhhcCCCE----EEEeCccHHHHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCccc
Confidence 455667777888887642 8899999999999999987631 24677777777 4454555544331
Q ss_pred ---------eEEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC----HHHHHHHHHHhCCCCCceEEE
Q 011842 207 ---------ECVKVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD----LDLVIQTLEESGFTQDRFYIH 273 (476)
Q Consensus 207 ---------~v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~----l~~I~~ia~~~g~~~~~~~lh 273 (476)
++..+|.+ |+++|++.|++...+...|++....+++|.+.| +++|.++|++||+ +++
T Consensus 155 ~~~~~~~~~~~~~~~~~-----d~~~le~~l~~~~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~-----lli 224 (401)
T TIGR01885 155 RTNFGPYVPGFKKIPYN-----NLEALEEALEDHGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNV-----LLI 224 (401)
T ss_pred ccccCCCCCCceEeCCC-----CHHHHHHHHHhcCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCC-----EEE
Confidence 24445544 789999999754334446666666888899887 9999999999999 999
Q ss_pred EecCcccccccccccCCCCCCc-ccccEEEEcCCCCCCCC-CCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhH
Q 011842 274 CDGALFGLMMPFVKKAPKVSFK-KPIGSVSVSGHKFVGCP-MPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAP 351 (476)
Q Consensus 274 vD~a~~g~~~~~~~~~~~~~~~-~~~Dsi~~s~hK~l~~p-~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~ 351 (476)
+|++|.++.. ..+... .... ...|+++++ |.++.+ +++|+++.++++.+.+... +. ..++.+.+ ...
T Consensus 225 ~DEv~~g~g~-~G~~~~-~~~~~~~~di~~~g--K~l~~g~~~ig~v~~~~~i~~~~~~~--~~---~~t~~~~p--~~~ 293 (401)
T TIGR01885 225 ADEIQTGLGR-TGKLLC-VDHENVKPDIVLLG--KALSGGVYPVSAVLADDDVMLTIKPG--EH---GSTYGGNP--LAC 293 (401)
T ss_pred EechhhCCCc-cchhhH-HhhcCCCCCEEEee--ccccCCCCCcEEEEEcHHHHhhccCC--CC---CCCCCCCH--HHH
Confidence 9999965322 122110 1111 126877765 887765 7899999988776655321 11 11222221 222
Q ss_pred HHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCCeEe--ecCCeeEEE--EecCC----cHHHh-----hceee-c
Q 011842 352 IFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAM--LNELSSTVV--FERPQ----DEEFV-----RRWQL-A 417 (476)
Q Consensus 352 l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~--~~~~~~iv~--f~~~~----~~~~~-----~~~~l-~ 417 (476)
....++++.+..+ ...++..+++++|++.|++.+...+ ......+.. +..+. ..++. ++..+ +
T Consensus 294 ~aa~a~L~~i~~~---~l~~~~~~~~~~~~~~L~~l~~~~~~~~~g~g~~~~i~~~~~~~~~~~~~l~~~l~~~Gv~v~~ 370 (401)
T TIGR01885 294 AVAVAALEVLEEE---KLAENAEKLGEIFRDQLKKLPKPIITEVRGRGLLNAIVIDESKTGRTAWDLCLKLKEKGLLAKP 370 (401)
T ss_pred HHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHhccCCceeEEeecCeeEEEEeccCcchhHHHHHHHHHHhCCEEEEe
Confidence 2233444444322 3446777789999999998753222 122222322 33221 11222 23333 3
Q ss_pred ccCCEEEEEEcCCCCHHHHHHHHHHHHHHH
Q 011842 418 CQGNIAHVVVMPNVTIDKLDDFLNELIENR 447 (476)
Q Consensus 418 ~~~~~lRv~~~~~~T~edid~~~~~l~~~~ 447 (476)
...+.+|++++..+|+++|++++++|++..
T Consensus 371 ~~~~~lRi~p~l~~t~~~i~~~l~~l~~~l 400 (401)
T TIGR01885 371 THGNIIRLAPPLVITEEQLDEGLEIIKKVI 400 (401)
T ss_pred cCCCEEEEeCCccCCHHHHHHHHHHHHHHh
Confidence 345789999999999999999999998764
No 256
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.75 E-value=1e-15 Score=157.64 Aligned_cols=281 Identities=13% Similarity=0.031 Sum_probs=176.4
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhh-------CCCcEEEecCCCchHHHHHHHHcCC-----
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREV-------FPDGILYASRESHYSVFKAARMYRM----- 206 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~-------~p~~~Vl~s~~~H~S~~~~~~~~G~----- 206 (476)
+...++.+.++++.+.+ ..+|+++|++||..|+.++|.. .+..+|......|.+...+..+.+.
T Consensus 77 ~~~~~la~~L~~~~~~~----~~~f~~SGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~ 152 (397)
T TIGR03246 77 EPVLRLAKKLVDATFAD----KVFFCNSGAEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQ 152 (397)
T ss_pred HHHHHHHHHHHhhCCCC----EEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccc
Confidence 44566777788877653 3899999999999999999764 1334566666677776555544432
Q ss_pred -------eEEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccc----cCHHHHHHHHHHhCCCCCceEEEEe
Q 011842 207 -------ECVKVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAV----DDLDLVIQTLEESGFTQDRFYIHCD 275 (476)
Q Consensus 207 -------~v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~i----d~l~~I~~ia~~~g~~~~~~~lhvD 275 (476)
.+..+|.+ |+++|++.+.++ ..+|+++...++.|.+ +.+++|.++|++||+ ++++|
T Consensus 153 ~~~~~~~~~~~~~~~-----d~~~l~~~l~~~---~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~-----llI~D 219 (397)
T TIGR03246 153 GFAPLPGGIKHAPYN-----DLAAAKALISDK---TCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNA-----LLIFD 219 (397)
T ss_pred CCCCCCCceEEeCCC-----CHHHHHHHhccC---eEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCC-----EEEEe
Confidence 23345544 899999999643 3467776556666744 459999999999999 99999
Q ss_pred cCcccccccccccCCCCCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHH
Q 011842 276 GALFGLMMPFVKKAPKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLW 355 (476)
Q Consensus 276 ~a~~g~~~~~~~~~~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~ 355 (476)
++|.|+.. .........+.-..|++++ .|.+++++++|+++.++++.+.+.... ...++.+.. .......
T Consensus 220 Ev~tG~Gr-~G~~~a~~~~gv~pDi~t~--~K~lggG~pigav~~~~~i~~~~~~~~-----~~~t~~~~p--~~~aaa~ 289 (397)
T TIGR03246 220 EVQTGVGR-TGELYAYMHYGVTPDILTS--AKALGGGFPIGAMLTTTEIAAHLKVGT-----HGTTYGGNP--LACAVAG 289 (397)
T ss_pred chhhcCCc-cccchhhhhcCCCCCEEEe--ehhhhCCcceeEEEEcHHHHHhccCCC-----cCCCCCCCH--HHHHHHH
Confidence 99965522 1111100011112687754 598888899999999988766653211 111222221 1122233
Q ss_pred HHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCC----eEeecCCeeEEEEecCC-----cHHHh-----hceee-cccC
Q 011842 356 YTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGI----SAMLNELSSTVVFERPQ-----DEEFV-----RRWQL-ACQG 420 (476)
Q Consensus 356 ~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~----~~~~~~~~~iv~f~~~~-----~~~~~-----~~~~l-~~~~ 420 (476)
++++.+. -++..++..++.++|.++|++.+. .........++.+...+ ...+. ++..+ +...
T Consensus 290 a~l~~~~---~~~l~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~~~~~~~~~~~l~~~Gv~~~~~g~ 366 (397)
T TIGR03246 290 KVLDLVN---TPELLAGVKQRHDLFVDGLEKINARYNVFSEIRGKGLLIGAVLTEAYQGKAKQFVNAAAEEGVIALIAGP 366 (397)
T ss_pred HHHHHHh---hccHHHHHHHHHHHHHHHHHHHHhcCCCeEeeecCceEEEEEEcCchhhHHHHHHHHHHHCCeEEeecCC
Confidence 3444332 245678888899999999988641 11122222333332211 11222 22223 2334
Q ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Q 011842 421 NIAHVVVMPNVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 421 ~~lRv~~~~~~T~edid~~~~~l~~~~~~ 449 (476)
+.+|++++..+|++|||.++++|+++.++
T Consensus 367 ~~lR~~p~~~~t~~~i~~~~~~l~~~l~~ 395 (397)
T TIGR03246 367 NVVRFAPSLVISDDDIDEGLARFERAIEQ 395 (397)
T ss_pred CEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 78999999999999999999999887754
No 257
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.75 E-value=1.1e-15 Score=155.94 Aligned_cols=226 Identities=13% Similarity=0.026 Sum_probs=149.9
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCC-C
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLIS-G 217 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~-g 217 (476)
.+.+++.+++++++|.+. +++|+|||+|+..++.++ ...||++|+++..+|.+...++...|++++.++++++ +
T Consensus 31 ~~~~~~e~~la~~~g~~~----~v~~~sgt~aL~~~l~al-~~~pGd~Viv~~~t~~~~~~~~~~~G~~~v~vd~d~~~~ 105 (376)
T TIGR02379 31 PFSRRCETWLENRTGTKK----ALLTPSCTAALEMAALLL-DIQPGDEVIMPSYTFVSTANAFVLRGAKIVFVDIRPDTM 105 (376)
T ss_pred HHHHHHHHHHHHHhCCCe----EEEeCCHHHHHHHHHHHc-CCCCcCEEEECCCCcHHHHHHHHHcCCEEEEEecCCCcC
Confidence 455666777888888753 899999999988877665 2238999999999999999999999999999999865 6
Q ss_pred ccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCccc
Q 011842 218 EIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKP 297 (476)
Q Consensus 218 ~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~ 297 (476)
.+|+++|+++++++++ +|++++ ++|...|+++|.++|++||+ +|++|++|+.+..-..+.. + ..
T Consensus 106 ~~d~~~le~~i~~~tk---~Iip~~---~~G~~~d~~~I~~la~~~~i-----~vIeDaa~~~g~~~~~~~~----g-~~ 169 (376)
T TIGR02379 106 NIDETLIESAITHRTK---AIVPVH---YAGVACDMDTIMALANKHQL-----FVIEDAAQGVMSTYKGRAL----G-SI 169 (376)
T ss_pred CCCHHHHHHhcCcCce---EEEEeC---CCCCccCHHHHHHHHHHCCC-----EEEEECccccCCccCCccc----C-CC
Confidence 7999999999977654 665554 56999999999999999999 9999999985432111111 1 11
Q ss_pred ccEEEEcC--CCCCCCCCCceeEEeehh-hhhhhcCCc-------cccCCC--CC--cccCCCCChhHHHHHHHHHHhCh
Q 011842 298 IGSVSVSG--HKFVGCPMPCGVQITRME-HINVLSSNV-------EYLASR--DA--TIMGSRNGHAPIFLWYTLNRKGY 363 (476)
Q Consensus 298 ~Dsi~~s~--hK~l~~p~~~G~l~~~~~-~~~~l~~~~-------~yl~~~--~~--~~~~sr~~~~~l~~~~~l~~~g~ 363 (476)
.|.-++|+ .|.+.++...|+++++++ +.+.+.... .+.... .. ...|......-+.....+. ..
T Consensus 170 ~~~~~fSf~~~K~l~~g~~gG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~n~~~~~~~Aa~g~~--qL 247 (376)
T TIGR02379 170 GHLGTFSFHETKNYTSGGEGGALLINDQAFIERAEIIREKGTNRSQFFRGEVDKYTWRDIGSSYLPSELQAAYLWA--QL 247 (376)
T ss_pred CCEEEEeCCCCCcCcccCCceEEEECCHHHHHHHHHHHHhCCCCccccccCCCcceeeeecccCCccHHHHHHHHH--HH
Confidence 24445554 466665546788887754 443332110 000000 00 0012111111122111212 23
Q ss_pred hcHHHHHHHHHHHHHHHHHHHHhc
Q 011842 364 KGFQKEVQKCLRNAHYLKDRLLDA 387 (476)
Q Consensus 364 ~g~~~~~~~~~~~a~~l~~~L~~~ 387 (476)
+.+.+..++.++++++..+.|...
T Consensus 248 ~~l~~~~~~r~~~~~~y~~~L~~~ 271 (376)
T TIGR02379 248 EQADRINQDRLATWQLYQDALKPL 271 (376)
T ss_pred HHhHHHHHHHHHHHHHHHHHhccC
Confidence 556778888888888888888764
No 258
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.75 E-value=5.7e-16 Score=160.29 Aligned_cols=217 Identities=13% Similarity=0.087 Sum_probs=150.0
Q ss_pred HHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHH----HHcCCeEEEEeCCCCCc
Q 011842 143 GVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAA----RMYRMECVKVDCLISGE 218 (476)
Q Consensus 143 ~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~----~~~G~~v~~v~~~~~g~ 218 (476)
++.+.++++.|.+. .+++++|+.|+..++.+... +|+.|+++...|......+ ...|+++..++.+
T Consensus 62 ~Le~~lA~l~g~~~----~l~~ssG~~Ai~~al~al~~--~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d~~---- 131 (425)
T PRK06084 62 VLEQRVAALEGGVG----ALAVASGMAAITYAIQTIAE--AGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFAAHD---- 131 (425)
T ss_pred HHHHHHHHHhCCCc----eeEehhHHHHHHHHHHHHhC--CCCEEEEeCCCcchHHHHHHHhcccceeEEEEECCC----
Confidence 45556778888643 78899999999999888765 8999999988776443333 2246777777643
Q ss_pred cCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCcccc
Q 011842 219 IDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKPI 298 (476)
Q Consensus 219 ~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~~ 298 (476)
|+++|++++.++++ +|++++++|++|.+.|+++|.++|++||+ ++++|++|+.+... . ....++
T Consensus 132 -d~e~le~ai~~~tk---lV~lesp~NPtG~v~dl~~I~~la~~~~i-----~vVvD~a~a~~~~~--~-----p~~~ga 195 (425)
T PRK06084 132 -DIAALEALIDERTK---AVFCESIGNPAGNIIDIQALADAAHRHGV-----PLIVDNTVATPVLC--R-----PFEHGA 195 (425)
T ss_pred -CHHHHHHHhccCCc---EEEEeCCCCCCCeecCHHHHHHHHHHcCC-----EEEEECCCcccccC--C-----hhhcCC
Confidence 89999999987765 78888999999999999999999999999 99999999854432 1 111248
Q ss_pred cEEEEcCCCCCCCC-CCceeEEee-hhh-hhh-------h-cCCccccCCC-CC----------------cccCCCCChh
Q 011842 299 GSVSVSGHKFVGCP-MPCGVQITR-MEH-INV-------L-SSNVEYLASR-DA----------------TIMGSRNGHA 350 (476)
Q Consensus 299 Dsi~~s~hK~l~~p-~~~G~l~~~-~~~-~~~-------l-~~~~~yl~~~-~~----------------~~~~sr~~~~ 350 (476)
|+++.|++||++++ ...|.+++. ... ... + ...+.|..-. .. ...|.+ ..
T Consensus 196 Divv~S~tK~l~G~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~--l~ 273 (425)
T PRK06084 196 DIVVHSLTKYIGGHGTSIGGIVVDSGKFPWAEHKERFALLNTPDPSYHGVTYTEAFGPAAFIGRCRVVPLRNMGAA--LS 273 (425)
T ss_pred CEEEECchhcccccccceeEEEEeCCccchhhccccccccccCCcccccchhhhhcchHHHHHHHHHHHHHhcCCC--CC
Confidence 99999999999854 445555553 321 011 1 0111121100 00 001111 12
Q ss_pred HHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCC
Q 011842 351 PIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGI 389 (476)
Q Consensus 351 ~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~ 389 (476)
++..|.. ..|.+.+..++++..+++..+.+.|++.+.
T Consensus 274 ~~~a~l~--lrgl~tl~~R~~~~~~na~~la~~L~~~p~ 310 (425)
T PRK06084 274 PFNAFLI--LQGLETLALRMERHTENALKVARYLQQHPQ 310 (425)
T ss_pred HHHHHHH--HcCcCcHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 3444443 346688999999999999999999999864
No 259
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.75 E-value=1.9e-15 Score=155.87 Aligned_cols=284 Identities=13% Similarity=0.047 Sum_probs=172.8
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhh------C---CCcEEEecCCCchHHHHHHHHcCCe--
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREV------F---PDGILYASRESHYSVFKAARMYRME-- 207 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~------~---p~~~Vl~s~~~H~S~~~~~~~~G~~-- 207 (476)
+....+.+.++++.+.+. .+++++||+||..|+..++.. . +..+|......|.+........+-.
T Consensus 73 ~~~~~~~~~l~~~~~~~~----~~~~~SGs~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~ 148 (400)
T PTZ00125 73 DVLGLAEKYITDLFGYDK----VLPMNSGAEAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKC 148 (400)
T ss_pred HHHHHHHHHHHhCCCCCE----EEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcch
Confidence 345566677777777642 889999999999999988742 1 2334555555666655555444321
Q ss_pred ----------EEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC----HHHHHHHHHHhCCCCCceEEE
Q 011842 208 ----------CVKVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD----LDLVIQTLEESGFTQDRFYIH 273 (476)
Q Consensus 208 ----------v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~----l~~I~~ia~~~g~~~~~~~lh 273 (476)
+..++. .|+++|++.+.. .++.+|+++...+++|.+.| +++|.++|++||+ +++
T Consensus 149 ~~~~~~~~~~~~~~~~-----~d~~~le~~l~~--~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~-----lli 216 (400)
T PTZ00125 149 YNNFGPFVPGFELVDY-----NDVEALEKLLQD--PNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNV-----LLI 216 (400)
T ss_pred hccCCCCCCCceEeCC-----CCHHHHHHHhCC--CCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCC-----EEE
Confidence 122222 289999999962 23457777777899999887 9999999999999 999
Q ss_pred EecCcccccccccccCCCCCCcccccEEEEcCCCCCCCCC-CceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHH
Q 011842 274 CDGALFGLMMPFVKKAPKVSFKKPIGSVSVSGHKFVGCPM-PCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPI 352 (476)
Q Consensus 274 vD~a~~g~~~~~~~~~~~~~~~~~~Dsi~~s~hK~l~~p~-~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l 352 (476)
+|++|.++............. ...|.++++ |+++.+. ++|++++++++.+.+..... ..++.+++ ....
T Consensus 217 ~Dev~~g~g~~G~~~~~~~~~-~~pd~~~~s--K~l~~g~~~ig~v~~~~~~~~~~~~~~~-----~~t~~~~~--~~~~ 286 (400)
T PTZ00125 217 VDEIQTGLGRTGKLLAHDHEG-VKPDIVLLG--KALSGGLYPISAVLANDDVMLVIKPGEH-----GSTYGGNP--LACA 286 (400)
T ss_pred EeccccCCCccchhhHHHhcC-CCCCEEEEc--ccccCCCcCcEEEEEcHHHHhhccCCCC-----CCCCCcCH--HHHH
Confidence 999997532211000000111 125777654 9888775 99999999987766532111 11222211 1112
Q ss_pred HHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhc----CCeEeecCCeeEEEEecCC--c---HHHh-----hceee-c
Q 011842 353 FLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDA----GISAMLNELSSTVVFERPQ--D---EEFV-----RRWQL-A 417 (476)
Q Consensus 353 ~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----g~~~~~~~~~~iv~f~~~~--~---~~~~-----~~~~l-~ 417 (476)
...++++.+..+++ .++..++.+++++.|++. +......+...++.+..+. . ..+. +++.+ +
T Consensus 287 aa~~~l~~i~~~~~---~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~Gv~v~~ 363 (400)
T PTZ00125 287 VAVEALEVLKEEKL---AENAQRLGEVFRDGLKELLKKSPWVKEIRGKGLLNAIVFDHSDGVNAWDLCLKLKENGLLAKP 363 (400)
T ss_pred HHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHHHHhcCCCeEEEecccEEEEEEEccCcchHHHHHHHHHHHCCeEEee
Confidence 22233444322333 345555677777777663 3322222333333333321 1 1222 23333 3
Q ss_pred ccCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 011842 418 CQGNIAHVVVMPNVTIDKLDDFLNELIENRSTWY 451 (476)
Q Consensus 418 ~~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~ 451 (476)
...+.+|++.+..+|+++|+++++.|.++.+++.
T Consensus 364 ~~~~~lRi~~~~~~~~~~i~~~l~~l~~~l~~~~ 397 (400)
T PTZ00125 364 THDNIIRFAPPLVITKEQLDQALEIIKKVLKSFD 397 (400)
T ss_pred cCCCEEEEECCccCCHHHHHHHHHHHHHHHHHHh
Confidence 3457899999888999999999999999887763
No 260
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.75 E-value=5.4e-16 Score=160.53 Aligned_cols=217 Identities=13% Similarity=0.065 Sum_probs=153.6
Q ss_pred HHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchH----HHHHHHHcCCeEEEEeCCCCC
Q 011842 142 VGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYS----VFKAARMYRMECVKVDCLISG 217 (476)
Q Consensus 142 ~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S----~~~~~~~~G~~v~~v~~~~~g 217 (476)
+++.+.++++.|.+. .++|++|+.|+..++.+... +++.|+++...|.+ +...++..|++++.++.+
T Consensus 60 ~~le~~lA~l~g~~~----~v~~~sG~~Ai~~al~~l~~--~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v~~~--- 130 (418)
T TIGR01326 60 DVLEQRIAALEGGVA----ALAVASGQAAITYAILNLAQ--AGDNIVSSSYLYGGTYNLFKHTLKRLGIEVRFVDPD--- 130 (418)
T ss_pred HHHHHHHHHHhCCCe----EEEEccHHHHHHHHHHHHhC--CCCEEEEECCCcHHHHHHHHHHHHHcCcEEEEECCC---
Confidence 456666888888753 79999999999999887765 89999999988754 345567789999999864
Q ss_pred ccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCccc
Q 011842 218 EIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKP 297 (476)
Q Consensus 218 ~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~ 297 (476)
|+++|++++.++++ +|++++++|++|.+.|+++|+++|++||+ ++++|++|+.+... ......
T Consensus 131 --d~~~l~~~l~~~t~---~V~le~p~NPtg~v~dl~~I~~la~~~~i-----~livD~t~~~~~~~-------~~l~~g 193 (418)
T TIGR01326 131 --DPEEFEKAIDENTK---AVFAETIGNPAINVPDIEAIAEVAHAHGV-----PLIVDNTFATPYLC-------RPIDHG 193 (418)
T ss_pred --CHHHHHHhcCcCCe---EEEEECCCCCCCeecCHHHHHHHHHHcCC-----EEEEECCCchhhcC-------CchhcC
Confidence 89999999976654 77888999999999999999999999999 99999999754321 111124
Q ss_pred ccEEEEcCCCCCCC-CCCceeEEeehhh-hhhhcCCccccCCCCC-------------------------cccCCCCChh
Q 011842 298 IGSVSVSGHKFVGC-PMPCGVQITRMEH-INVLSSNVEYLASRDA-------------------------TIMGSRNGHA 350 (476)
Q Consensus 298 ~Dsi~~s~hK~l~~-p~~~G~l~~~~~~-~~~l~~~~~yl~~~~~-------------------------~~~~sr~~~~ 350 (476)
+|+++.|++||++. ++++|+++++.+. ...... ...+..... ...|... .
T Consensus 194 ~Divv~S~sK~l~g~G~~lGg~v~~~~~~~~~~~~-~~~~~~~~~~q~a~~~~~~~~~~~~~~~~~~~~~~~~G~~~--~ 270 (418)
T TIGR01326 194 ADIVVHSATKYIGGHGTAIGGVIVDGGKFDWANGR-FPLFTTPDPSYHGLVFTETFGNPAFIVKARVQLLRDLGAAL--S 270 (418)
T ss_pred CeEEEECccccccCCccceEEEEEecccccccccc-cccccCCCCccccchhhhhhchhhHHHHHHHHHHHhcCCCC--C
Confidence 89999999999985 5778988886532 111000 000000000 0011111 1
Q ss_pred HHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCC
Q 011842 351 PIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGI 389 (476)
Q Consensus 351 ~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~ 389 (476)
+...|.. ..+.+.+..++++..+++..+.+.|.+.+.
T Consensus 271 p~~a~~~--~~~l~tl~~R~~~~~~~a~~la~~L~~~~~ 307 (418)
T TIGR01326 271 PFNAFLL--LQGLETLSLRMERHVENALKVAEFLEAHPK 307 (418)
T ss_pred HHHHHHH--HCCcccHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 3344433 335567777888888889999999988753
No 261
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.75 E-value=1.1e-15 Score=156.17 Aligned_cols=227 Identities=14% Similarity=0.025 Sum_probs=150.8
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCC-C
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLIS-G 217 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~-g 217 (476)
.+.+++.+++++++|.+. +++|+|||.|+.+++.++. ..||++|+++.++|.++..+++..|++++.++++++ +
T Consensus 31 ~~~~~~e~~la~~~g~~~----~v~~~sgt~al~~~l~~~~-~~~Gd~Viv~~~t~~~~~~~~~~~G~~~v~~d~d~~~~ 105 (375)
T PRK11706 31 GFTRRCQQWLEQRFGSAK----VLLTPSCTAALEMAALLLD-IQPGDEVIMPSYTFVSTANAFVLRGAKIVFVDIRPDTM 105 (375)
T ss_pred HHHHHHHHHHHHHhCCCe----EEEECCHHHHHHHHHHHhC-CCCCCEEEECCCCcHHHHHHHHHcCCEEEEEecCCCcC
Confidence 566777788888888853 8999999999887766542 238999999999999999999999999999999865 5
Q ss_pred ccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCccc
Q 011842 218 EIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKP 297 (476)
Q Consensus 218 ~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~ 297 (476)
.+|+++|++++.++++ +|++++ ++|...++++|.++|++||+ ++++|++|+.+.....+.. ...
T Consensus 106 ~~d~~~le~~i~~~tk---~i~~~~---~~G~~~~~~~i~~la~~~~i-----~vIeD~a~a~g~~~~~~~~-----g~~ 169 (375)
T PRK11706 106 NIDETLIEAAITPKTR---AIVPVH---YAGVACEMDTIMALAKKHNL-----FVVEDAAQGVMSTYKGRAL-----GTI 169 (375)
T ss_pred CcCHHHHHHhcCCCCe---EEEEeC---CCCCccCHHHHHHHHHHcCC-----EEEEECccccccccCCeee-----ecC
Confidence 7999999999977654 555554 57989999999999999999 9999999985542111111 011
Q ss_pred ccEEEEcCC--CCCCCCCCceeEEeehhhhhhh---cC---Ccc-ccCCC----CCcccCCCCChhHHHHHHHHHHhChh
Q 011842 298 IGSVSVSGH--KFVGCPMPCGVQITRMEHINVL---SS---NVE-YLASR----DATIMGSRNGHAPIFLWYTLNRKGYK 364 (476)
Q Consensus 298 ~Dsi~~s~h--K~l~~p~~~G~l~~~~~~~~~l---~~---~~~-yl~~~----~~~~~~sr~~~~~l~~~~~l~~~g~~ 364 (476)
.|.-++|+| |.+.++.|.+++..++++.+.+ .. ... +.... .....|+......+. +++.....+
T Consensus 170 ~~~~~~Sf~~~K~l~~g~gG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--aa~~~~ql~ 247 (375)
T PRK11706 170 GHIGCFSFHETKNYTAGEGGALLINDPALIERAEIIREKGTNRSQFFRGQVDKYTWVDIGSSYLPSELQ--AAYLWAQLE 247 (375)
T ss_pred cCEEEEeCCCCccccccCCeEEEECCHHHHHHHHHHHHcCCCcchhhccCCCcceeeecccccCcCHHH--HHHHHHHHH
Confidence 355566766 9998755544444334443322 11 000 10000 000012211111111 122111224
Q ss_pred cHHHHHHHHHHHHHHHHHHHHhcC
Q 011842 365 GFQKEVQKCLRNAHYLKDRLLDAG 388 (476)
Q Consensus 365 g~~~~~~~~~~~a~~l~~~L~~~g 388 (476)
.+++..++..++++++.+.|...+
T Consensus 248 ~l~~~~~~R~~~~~~~~~~L~~~~ 271 (375)
T PRK11706 248 AADRINQRRLALWQRYYDALAPLA 271 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCC
Confidence 567788888888999999998764
No 262
>PLN02452 phosphoserine transaminase
Probab=99.74 E-value=1.5e-15 Score=153.68 Aligned_cols=317 Identities=15% Similarity=0.110 Sum_probs=207.6
Q ss_pred CCcCCcchHHHHHHHHHhhC--CCC-CCcccCccchhhHHHHHHHHHHHHHHcCCCCCcccEEEcC-CchhHHHHHHHHH
Q 011842 103 PYNLDFDYGALAQLQHFSIN--NLG-DPFIESNYGVHSRQFEVGVLDWFARLWELENNEYWGYITN-CGTEGNLHGILVG 178 (476)
Q Consensus 103 p~~~~~~~~~l~~~l~~~~n--~~g-~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~g~~t~-ggt~An~~al~aa 178 (476)
|.....+...+.++....+| ..| +..+.++......++.+++.+.+.++++.+. ++..++.+ |||.++-.++...
T Consensus 13 pGP~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~f~~i~~~~~~~L~~l~~~p~-~y~v~~l~Gsgt~~~ea~~~nl 91 (365)
T PLN02452 13 AGPATLPANVLAKAQAELYNWEGSGMSVMEMSHRGKEFLSIIQKAEADLRELLDIPD-NYEVLFLQGGASTQFAAIPLNL 91 (365)
T ss_pred CCCCCCCHHHHHHHHHHHhcccccCccccccCCCchHHHHHHHHHHHHHHHHhCCCC-CceEEEEeCccHHHHHHHHHhc
Confidence 33333444555555554443 222 2233444445667899999999999999864 46676665 4555555555544
Q ss_pred HhhCCCcEEEecCCCchH--HHHHHHHcCCeEEEEeCCCCC---ccCHHHHHHHHHcCCCCcEEEEEeeCCCcccc-ccC
Q 011842 179 REVFPDGILYASRESHYS--VFKAARMYRMECVKVDCLISG---EIDCADFKAKLLQNKDKPAIINVNIGTTVKGA-VDD 252 (476)
Q Consensus 179 ~~~~p~~~Vl~s~~~H~S--~~~~~~~~G~~v~~v~~~~~g---~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~-id~ 252 (476)
.. +++.+++-....++ +.+.++.+|...+........ -.|++++ +.++ .+.+|.+++..|.+|. +.|
T Consensus 92 ~~--~~~~~l~~~~G~fg~r~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~-~~~~v~~~hnETstGv~~~~ 164 (365)
T PLN02452 92 CK--PGDKADFVVTGSWSKKAAKEAKKYCKTNVIASGKDEKYTKIPSVSEW----ELTP-DAKFVHICANETIHGVEFKD 164 (365)
T ss_pred CC--CCCeEEEEECCHHHHHHHHHHHHhCCCcEEEecCCCCCCCCCChHHc----CCCC-CCcEEEECCCCCCCcEecCc
Confidence 44 66666665667766 557777788744433222222 3566654 2222 2458999999999999 588
Q ss_pred HHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcC-C
Q 011842 253 LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSS-N 331 (476)
Q Consensus 253 l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~-~ 331 (476)
++++.+ + .++||++++.+..| +++.+ .+.+..++||.++ |.|.|++++|+++++.... .
T Consensus 165 ~~~i~~------~-----~lvVDa~Ss~g~~p-------idv~~-~~v~~~saqK~lG-P~Gl~~v~vr~~~l~~~~~~~ 224 (365)
T PLN02452 165 YPDVGN------V-----PLVADMSSNFLSKP-------VDVSK-YGVIYAGAQKNVG-PSGVTIVIIRKDLIGNARPIT 224 (365)
T ss_pred ccccCC------C-----eEEEECCccccCcc-------cCHHH-cCEEEEecccccC-CCCeEEEEEcHHHHhhcccCC
Confidence 887753 6 89999999877666 55544 2334469999997 9999999999998765432 2
Q ss_pred ccccCC----CCCcccCCCCChhHHHHHHHHHHhChh-cHHHHHHHHHHHHHHHHHHHHhc-CCeEe-ecC---CeeEEE
Q 011842 332 VEYLAS----RDATIMGSRNGHAPIFLWYTLNRKGYK-GFQKEVQKCLRNAHYLKDRLLDA-GISAM-LNE---LSSTVV 401 (476)
Q Consensus 332 ~~yl~~----~~~~~~~sr~~~~~l~~~~~l~~~g~~-g~~~~~~~~~~~a~~l~~~L~~~-g~~~~-~~~---~~~iv~ 401 (476)
+.|+.- ...+..+|.+....+.+..+++.+..+ |++.+.++..++++++++.|++. |+... ..+ ...+++
T Consensus 225 ~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~~G~y~~~~~~~~rs~~~vs 304 (365)
T PLN02452 225 PGMLDYKIHAENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAIDESNGFYVCPVEKSVRSLMNVP 304 (365)
T ss_pred CchhhHHHHHhcCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChHHhCCeEEE
Confidence 334321 112334677666667777888888665 89999999999999999999985 55222 221 235788
Q ss_pred EecCCc---HHHhh-----ceee-c---ccCCEEEEEEcCCCCHHHHHHHHHHHHHHHH
Q 011842 402 FERPQD---EEFVR-----RWQL-A---CQGNIAHVVVMPNVTIDKLDDFLNELIENRS 448 (476)
Q Consensus 402 f~~~~~---~~~~~-----~~~l-~---~~~~~lRv~~~~~~T~edid~~~~~l~~~~~ 448 (476)
|..++. +.|.+ ++.. + ..++ +|+++...++.++|+.|++.|++-.+
T Consensus 305 F~~~~~~~~~~f~~~~~~~g~~~~~G~r~~gg-~R~s~yna~~~~~v~~L~~~m~~f~~ 362 (365)
T PLN02452 305 FTLGGSELEAEFVKEAAKAGMVQLKGHRSVGG-MRASIYNAMPLAGVEKLVAFMKDFQA 362 (365)
T ss_pred EEcCCchhHHHHHHHHHHCCCcccCCccccCc-eEEECcCCCCHHHHHHHHHHHHHHHH
Confidence 887653 22222 2211 1 1133 99999999999999999999988654
No 263
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.74 E-value=1.4e-15 Score=148.67 Aligned_cols=289 Identities=15% Similarity=0.142 Sum_probs=201.3
Q ss_pred hHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCch---HHHHHHHHcCC--eEEEE
Q 011842 137 SRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHY---SVFKAARMYRM--ECVKV 211 (476)
Q Consensus 137 ~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~---S~~~~~~~~G~--~v~~v 211 (476)
..++|..+.+...+|||++.. -+-..+|+.||+.+..+..+ |||.|+--+..|. +.-.-..+.|. +++.+
T Consensus 70 VD~vE~laierak~LFga~~a---nVQPhSGs~AN~av~~All~--pGDtimgm~l~~GGHltHg~~v~~sG~~~~~v~Y 144 (413)
T COG0112 70 VDEVEELAIERAKKLFGAEYA---NVQPHSGSQANQAVYLALLQ--PGDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSY 144 (413)
T ss_pred HHHHHHHHHHHHHHHhCCCcc---ccCCCCchHHHHHHHHHHcC--CCCeEecccCCCCCcccCCCCCCccceeEEeEec
Confidence 468999999999999999853 34456999999999999887 9999997666543 33222233343 67778
Q ss_pred eCC-CCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCC
Q 011842 212 DCL-ISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAP 290 (476)
Q Consensus 212 ~~~-~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~ 290 (476)
++| +++.+|+|.+++.+.+.. |.+|++ |.+..-..-|++++.+||++.|. +|.+|.||-.+.+....+..
T Consensus 145 ~vd~et~~IDyD~~~k~a~e~k--PK~ii~--G~SaY~r~id~~~~reIad~VGA-----~L~~DmAHiaGLVA~G~~p~ 215 (413)
T COG0112 145 GVDPETGLIDYDEVEKLAKEVK--PKLIIA--GGSAYSRPIDFKRFREIADEVGA-----YLMVDMAHVAGLIAGGVHPN 215 (413)
T ss_pred ccccccCccCHHHHHHHHHHhC--CCEEEE--CccccccccCHHHHHHHHHHhCc-----eEEehHHHHHHHHhcccCCC
Confidence 888 569999999999988763 446666 76666778899999999999999 99999999654444444433
Q ss_pred CCCCcccccEEEEcCCCCCCCCCCceeEEeeh-hhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHH
Q 011842 291 KVSFKKPIGSVSVSGHKFVGCPMPCGVQITRM-EHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKE 369 (476)
Q Consensus 291 ~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~-~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~ 369 (476)
++. .+|+++.+.||.+.+| +.|++++++ ++.+.+.... + +..++...-+...+...+++....-+|+++
T Consensus 216 P~~---~AdvVTtTTHKTlrGP-rGG~Il~~~eel~kkin~aV-F-----Pg~qggpl~HviAakaVa~~Eal~p~fk~Y 285 (413)
T COG0112 216 PLP---HADVVTTTTHKTLRGP-RGGIILTNDEELAKKINSAV-F-----PGLQGGPLMHVIAAKAVAFKEALEPEFKEY 285 (413)
T ss_pred CCC---ccceEeCCcccCCCCC-CceEEEeccHHHHHHhhhhc-C-----CccCCChHHHHHHHHHHHHHHHcChhHHHH
Confidence 233 2899999999999965 568888886 4555443211 0 122344433444455566666667789999
Q ss_pred HHHHHHHHHHHHHHHHhcCCeEeecC-CeeEEEEecC-C---c---HHHhhceee-------cc------cCCEEEEEE-
Q 011842 370 VQKCLRNAHYLKDRLLDAGISAMLNE-LSSTVVFERP-Q---D---EEFVRRWQL-------AC------QGNIAHVVV- 427 (476)
Q Consensus 370 ~~~~~~~a~~l~~~L~~~g~~~~~~~-~~~iv~f~~~-~---~---~~~~~~~~l-------~~------~~~~lRv~~- 427 (476)
.++..+||+.|.+.|.+.|+.++..- .+..+.+... . . +..+.+..+ |. ....+|+.+
T Consensus 286 a~qVv~NAkaLAe~l~~~G~~vvsGgTdnHl~lVDl~~~~~~Gk~ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtp 365 (413)
T COG0112 286 AKQVVKNAKALAEALKERGFKVVSGGTDNHLVLVDLRSKGLTGKKAEAALERAGITVNKNAIPFDPESPFVTSGIRIGTP 365 (413)
T ss_pred HHHHHHHHHHHHHHHHHcCCeEecCCccceEEEEEcccCCCCHHHHHHHHHHcCEeeccCCCCCCCCCCCCCccceeccH
Confidence 99999999999999999999776532 2344444332 1 1 222333322 21 135678854
Q ss_pred ---cCCCCHHHHHHHHHHHHHHHHH
Q 011842 428 ---MPNVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 428 ---~~~~T~edid~~~~~l~~~~~~ 449 (476)
.....++|++.+.+.|.+++..
T Consensus 366 a~TtrG~~e~e~~~Ia~~I~~vl~~ 390 (413)
T COG0112 366 AVTTRGFGEAEMEEIADLIADVLDG 390 (413)
T ss_pred HHhhcCCCHHHHHHHHHHHHHHHhc
Confidence 4555788988888888777653
No 264
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.74 E-value=4.8e-15 Score=158.84 Aligned_cols=227 Identities=15% Similarity=0.105 Sum_probs=157.2
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCC--C
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLI--S 216 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~--~ 216 (476)
..-.+..+..|+.+|.+.. -++|+|+|.+|..+++++.. ||+.|++++..|-|+..++.+.|+.+++++... .
T Consensus 195 G~i~eAe~~aA~~fgAd~t---yfvvNGTS~~n~av~~a~~~--~Gd~VLvdRN~HKSv~~aLilsga~PVYl~P~~n~~ 269 (713)
T PRK15399 195 GPHLEAEEYIARTFGAEQS---YIVTNGTSTSNKIVGMYAAP--AGSTLLIDRNCHKSLAHLLMMSDVVPIWLKPTRNAL 269 (713)
T ss_pred hHHHHHHHHHHHHhCCCcE---EEEeCChHHHHHHHHHHhcC--CCCEEEeecccHHHHHHHHHHcCCeeEEeccccccc
Confidence 4455677888999999863 67888999999999998876 999999999999999999999999999987642 2
Q ss_pred ---CccCH-----HHHHHHHHcCC--CCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccc--c
Q 011842 217 ---GEIDC-----ADFKAKLLQNK--DKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMM--P 284 (476)
Q Consensus 217 ---g~~D~-----~~Le~~l~~~~--~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~--~ 284 (476)
|.+++ +.++++|.++. ++|..+++|++ |+.|.+-++++|+++| |+ .+||+|+||++... |
T Consensus 270 Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~p-TYdGi~yd~~~I~~~~---g~----~~ilvDEAhgah~~F~p 341 (713)
T PRK15399 270 GILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNS-TYDGLLYNTDWIKQTL---DV----PSIHFDSAWVPYTHFHP 341 (713)
T ss_pred CCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECC-CCCceeeCHHHHHHHh---CC----CEEEEeccchhhhhcCc
Confidence 34565 99999998764 46778888876 7889999999999999 66 14589999987543 2
Q ss_pred ccccCCCCCCcccccEE---EEcCCCCCCCCCCceeEEeehhhh-hhhcCCccccCCCCCcccCCCCChhHHHHHHHH--
Q 011842 285 FVKKAPKVSFKKPIGSV---SVSGHKFVGCPMPCGVQITRMEHI-NVLSSNVEYLASRDATIMGSRNGHAPIFLWYTL-- 358 (476)
Q Consensus 285 ~~~~~~~~~~~~~~Dsi---~~s~hK~l~~p~~~G~l~~~~~~~-~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l-- 358 (476)
.....+.+.....+|.. +-|.||.+.+-...+++.++...- +.+......+ +.|-+ ...+.+++
T Consensus 342 ~~~~~sam~~~~~aD~~i~~tQStHKtL~alTQaS~iHvk~~vd~~~~n~a~~m~-------~STSP---sY~LmASLD~ 411 (713)
T PRK15399 342 IYQGKSGMSGERVPGKVIFETQSTHKMLAAFSQASLIHIKGEYDEETFNEAFMMH-------TSTSP---SYPIVASVET 411 (713)
T ss_pred ccCCcChhhCCCCCCeeeeeeeehhccccccchheeeeecCCCCHHHHHHHHHHH-------cCCCc---HHHHHHHHHH
Confidence 22222222221124555 999999999999999998876421 1111110111 11111 12222222
Q ss_pred --HHhChhcHHHHHHHHHHHHHHHHHHHHhcC
Q 011842 359 --NRKGYKGFQKEVQKCLRNAHYLKDRLLDAG 388 (476)
Q Consensus 359 --~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g 388 (476)
+.+....-++.+++..+++..|++.|.+.+
T Consensus 412 a~~~m~~~~G~~l~~~~i~~a~~fR~~l~~~~ 443 (713)
T PRK15399 412 AAAMLRGNPGKRLINRSVERALHFRKEVQRLR 443 (713)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHHhcc
Confidence 222111236677888888888888887753
No 265
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.73 E-value=3.3e-15 Score=153.56 Aligned_cols=285 Identities=14% Similarity=0.045 Sum_probs=168.7
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhh--CCCc----EEEecCCCchHHHHHHHHcCCeEEEE-
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREV--FPDG----ILYASRESHYSVFKAARMYRMECVKV- 211 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~--~p~~----~Vl~s~~~H~S~~~~~~~~G~~v~~v- 211 (476)
+.+.++.+.++++.+.+ .+++++||++||..|+++++.. .+|+ .|++.+..|..+...+..++......
T Consensus 73 ~~~~~la~~l~~~~~~~----~v~~~~sGseA~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~ 148 (389)
T PRK01278 73 PEQERLAERLVENSFAD----KVFFTNSGAEAVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLE 148 (389)
T ss_pred hHHHHHHHHHHhhCCCC----EEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcc
Confidence 44556777777776543 3899999999999999998753 2333 67766666555444443333221111
Q ss_pred ---eCCCCCc----cCHHHHHHHHHcCCCCcEEEEEeeCCCccccc----cCHHHHHHHHHHhCCCCCceEEEEecCccc
Q 011842 212 ---DCLISGE----IDCADFKAKLLQNKDKPAIINVNIGTTVKGAV----DDLDLVIQTLEESGFTQDRFYIHCDGALFG 280 (476)
Q Consensus 212 ---~~~~~g~----~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~i----d~l~~I~~ia~~~g~~~~~~~lhvD~a~~g 280 (476)
|..++.. .|+++|++.+.+++ .+|+++...+++|.+ +.+++|.++|++||+ ++++|++|.+
T Consensus 149 ~~~~~~~~~~~~~~~d~~~l~~~l~~~~---~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~-----~lI~DEv~~g 220 (389)
T PRK01278 149 GFGPLVPGFDQVPFGDIEALKAAITPNT---AAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGL-----LLIFDEVQCG 220 (389)
T ss_pred cCCCCCCCceEeCCCCHHHHHHhhCCCe---EEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCC-----EEEEeccccC
Confidence 1111111 48999999996543 477776556666733 479999999999999 9999999986
Q ss_pred ccccccccCCCCCCcc-cccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHH
Q 011842 281 LMMPFVKKAPKVSFKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLN 359 (476)
Q Consensus 281 ~~~~~~~~~~~~~~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~ 359 (476)
+.... .... ..... ..|.++ +.|.+++++++|+++.+++..+.+.....+ .++. ..++.+++++.
T Consensus 221 ~g~~g-~~~~-~~~~~~~pdi~t--~sK~l~~G~~ig~~~~~~~~~~~~~~~~~~-----~t~~-----~~~~~~aaa~a 286 (389)
T PRK01278 221 MGRTG-KLFA-HEWAGVTPDIMA--VAKGIGGGFPLGACLATEEAAKGMTPGTHG-----STYG-----GNPLAMAVGNA 286 (389)
T ss_pred CCcCC-ccee-ecccCCCCCEEE--EehhccCCcceEEEEEcHHHHhccCCCCCC-----CCCC-----ccHHHHHHHHH
Confidence 53221 1100 01111 156554 569998889999999998876655322111 1121 12344444433
Q ss_pred HhChhcHHHHHHHHHHHHHHHHHHHHhc----C-CeEeecCCeeEEEEecC-CcHHHh-----hceee-cccCCEEEEEE
Q 011842 360 RKGYKGFQKEVQKCLRNAHYLKDRLLDA----G-ISAMLNELSSTVVFERP-QDEEFV-----RRWQL-ACQGNIAHVVV 427 (476)
Q Consensus 360 ~~g~~g~~~~~~~~~~~a~~l~~~L~~~----g-~~~~~~~~~~iv~f~~~-~~~~~~-----~~~~l-~~~~~~lRv~~ 427 (476)
.+..-.-.+..++..++.++++++|++. + +.....+...++.+..+ +..++. ++..+ +...+.+|+++
T Consensus 287 ~l~~l~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~v~g~G~~~~i~~~~~~~~~~~~l~~~GV~~~p~~~~~lR~~p 366 (389)
T PRK01278 287 VLDVILAPGFLDNVQRMGLYLKQKLEGLVDRFPDVIEEVRGKGLLLGLKCVVPNRDLVQALRDEGLLTVGAGDNVVRLLP 366 (389)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHHHhhCCCceeeEecccEEEEEEEecCHHHHHHHHHHCCeEEeecCCCEEEEeC
Confidence 3311111234456666677777777653 2 21112222223333332 222332 23333 34457899998
Q ss_pred cCCCCHHHHHHHHHHHHHHHHH
Q 011842 428 MPNVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 428 ~~~~T~edid~~~~~l~~~~~~ 449 (476)
+..+|+++|+++++.|+++.+.
T Consensus 367 ~~~~~~~~i~~~l~~l~~~l~~ 388 (389)
T PRK01278 367 PLIITEEEIDEALERLERAAES 388 (389)
T ss_pred CcccCHHHHHHHHHHHHHHHHh
Confidence 8788999999999999887654
No 266
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.73 E-value=6.8e-16 Score=156.27 Aligned_cols=285 Identities=11% Similarity=0.029 Sum_probs=192.4
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccE-EEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchH--HH-HHHHHcCC-eEEE
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWG-YITNCGTEGNLHGILVGREVFPDGILYASRESHYS--VF-KAARMYRM-ECVK 210 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g-~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S--~~-~~~~~~G~-~v~~ 210 (476)
...++.+++.+.+.++++.+.+ +.. +++.|||.++=.++...... +++.+++.. .++ +. +.++.+|+ ++..
T Consensus 36 ~F~~i~~e~~~~L~~l~~~~~~-~~v~~l~GsGT~a~Eaa~~nl~~~-~g~~vLv~g--~FG~r~~~eia~~~g~~~v~~ 111 (374)
T TIGR01365 36 LGKEKLAEAIKKTREMLGVPAD-YLIGIVPASDTGAVEMALWSMLGC-RGVDVLAWE--SFGKGWVTDVTKQLKLPDVRV 111 (374)
T ss_pred HHHHHHHHHHHHHHHHhCCCCC-cEEEEECCchHHHHHHHHHHcCCC-CCCeEEEEC--HHHHHHHHHHHHhcCCCCcEE
Confidence 5678999999999999998533 444 45777777777777665532 676666643 444 34 78888999 5888
Q ss_pred EeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCC
Q 011842 211 VDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAP 290 (476)
Q Consensus 211 v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~ 290 (476)
+.......+|+++++. .. -|.+++..|.||...|+++|+... ++. +++||++.+.+..|
T Consensus 112 l~~~~g~~~~~~~ve~----~~----~v~~vhnETSTGv~npv~~i~~~~--~~~-----lliVDavSs~g~~~------ 170 (374)
T TIGR01365 112 LEAEYGKLPDLKKVDF----KN----DVVFTWNGTTSGVRVPNGDFIPAD--REG-----LTICDATSAAFAQD------ 170 (374)
T ss_pred EcCCCCCCCCHHHcCC----CC----CEEEecCCCchheecccccccccc--CCC-----cEEEEccchhcCCC------
Confidence 8776666789999872 11 256889999999999997766432 478 99999998766655
Q ss_pred CCCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCc------cccCCCCC-----c-c-cCCCCChhHHHHHHH
Q 011842 291 KVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNV------EYLASRDA-----T-I-MGSRNGHAPIFLWYT 357 (476)
Q Consensus 291 ~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~------~yl~~~~~-----~-~-~~sr~~~~~l~~~~~ 357 (476)
+++.+ +|++.++++|.+++|.|.++++++++.++...... .|+..... . . ..++.-.+...+++.
T Consensus 171 -l~~d~-iDv~~tgsQK~L~~ppGls~v~vs~~Al~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~t~~TP~v~~l~a~ 248 (374)
T TIGR01365 171 -LDYHK-LDVVTFSWQKVLGGEGAHGMLILSPRAVARLESYTPAWPLPKIFRLTKGGKLNKKIFEGSTINTPSMLCVEDW 248 (374)
T ss_pred -CChhH-CcEEEEechhccCCCCceEEEEECHHHHHHHhhcCCCCCChhhhccccccchhhhhhcCCCCCChHHHHHHHH
Confidence 44443 99999999999999999999999998765433211 22221000 0 0 112222223333333
Q ss_pred ---HHHhChh-cHHHHHHHHHHHHHHHHHHHHhcCCeEeec--C--Cee-EEEEecCC--------------cHHHh---
Q 011842 358 ---LNRKGYK-GFQKEVQKCLRNAHYLKDRLLDAGISAMLN--E--LSS-TVVFERPQ--------------DEEFV--- 411 (476)
Q Consensus 358 ---l~~~g~~-g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~--~--~~~-iv~f~~~~--------------~~~~~--- 411 (476)
++.+..+ |++++.+|..++++.+++.+++.|+..+.. + .++ ++++..+. ..++.
T Consensus 249 ~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l~~~~~~~~~rS~tvt~v~~~~~~~~~~~~~~~~~~~~~~~~~l 328 (374)
T TIGR01365 249 LDALKWAESIGGLKPLIARADDNLAVLEAFVAKNNWIHFLAETPEIRSNTSVCLKVVDPAIDALDEDAQADFAKELISTL 328 (374)
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCChhhcCCCeEEEEeCCccccccccchhhHHHHHHHHHH
Confidence 4433354 899999999999999999999999433332 2 233 23344321 12222
Q ss_pred --hceeec-----ccCCEEEEEEcCCCCHHHHHHHHHHHHHHH
Q 011842 412 --RRWQLA-----CQGNIAHVVVMPNVTIDKLDDFLNELIENR 447 (476)
Q Consensus 412 --~~~~l~-----~~~~~lRv~~~~~~T~edid~~~~~l~~~~ 447 (476)
+++.+. ..+..+||..++.++.+||+.+++.|.=+.
T Consensus 329 ~~~gi~i~~G~~~~~~~~fRIg~~G~i~~~di~~l~~~l~~~~ 371 (374)
T TIGR01365 329 EKEGVAYDIGSYRDAPSGLRIWCGATVEKSDLECLCPWLDWAF 371 (374)
T ss_pred HHCCEEEeccccccCCCceEEecCCcCCHHHHHHHHHHHHHHH
Confidence 122232 224789999999999999999999986543
No 267
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.73 E-value=1.6e-15 Score=162.42 Aligned_cols=225 Identities=12% Similarity=0.083 Sum_probs=157.1
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCC--
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLIS-- 216 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~-- 216 (476)
..-.+..+..|+++|.+.. -++|+|+|.+|..++.++.. ||+.|++++..|-|+..++.+.|+.+++++...+
T Consensus 195 G~i~eAe~~AA~~fgAd~t---yfvvNGTS~~n~av~~a~~~--~Gd~VLvdRN~HKSv~haLilsga~PVYl~P~rn~~ 269 (714)
T PRK15400 195 GPHKEAEEYIARVFNADRS---YMVTNGTSTANKIVGMYSAP--AGSTVLIDRNCHKSLTHLMMMSDVTPIYFRPTRNAY 269 (714)
T ss_pred hHHHHHHHHHHHHhCCCcE---EEEeCchHHHHHHHHHHhcC--CCCEEEeecccHHHHHHHHHHcCCeEEEeccccccc
Confidence 4456777889999999863 67788889999999888876 9999999999999999999999999999876522
Q ss_pred ---CccC-----HHHHHHHHHcCC--CCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccc--c
Q 011842 217 ---GEID-----CADFKAKLLQNK--DKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMM--P 284 (476)
Q Consensus 217 ---g~~D-----~~~Le~~l~~~~--~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~--~ 284 (476)
|.++ .+.++++|.++. ++|+.+++|++ |+.|.+.++++|+++|+.++ ||+|+||++... |
T Consensus 270 Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~p-TYdG~~yd~~~I~~~~~~~~-------ilvDEAwgah~~F~p 341 (714)
T PRK15400 270 GILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYNTDFIKKTLDVKS-------IHFDSAWVPYTNFSP 341 (714)
T ss_pred CCccCCCccccCHHHHHHHHHhCccccCccEEEEECC-CCccEecCHHHHHHHhCCCC-------EEEEccchhhhccCc
Confidence 3455 899999998764 46778888776 78899999999999997664 589999987543 2
Q ss_pred ccccCCCCCCcccc---c--EEEEcCCCCCCCCCCceeEEeehhhh-hhhcCCccccCCCCCcccCCCCChhHHHHHHHH
Q 011842 285 FVKKAPKVSFKKPI---G--SVSVSGHKFVGCPMPCGVQITRMEHI-NVLSSNVEYLASRDATIMGSRNGHAPIFLWYTL 358 (476)
Q Consensus 285 ~~~~~~~~~~~~~~---D--si~~s~hK~l~~p~~~G~l~~~~~~~-~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l 358 (476)
..+..+.+. .++ | +++-|.||.+.+-...+++.++...- +.+......+ +.|-+ ...+.+++
T Consensus 342 ~~~~~sam~--~ga~~~~~i~vtQStHKtL~alTQaS~LHvkg~vd~~~~n~a~~m~-------~STSP---sY~l~ASL 409 (714)
T PRK15400 342 IYEGKCGMS--GGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDVNEETFNEAYMMH-------TTTSP---HYGIVAST 409 (714)
T ss_pred ccCCcChhh--cCCCCCCceEEEEchhhcccchhHHhHHHHcCCCCHHHHHHHHHHH-------cCCCc---HHHHHHHH
Confidence 222111121 223 4 89999999999888888887755310 1111100111 11111 12222222
Q ss_pred ----HHhChhcHHHHHHHHHHHHHHHHHHHHhcC
Q 011842 359 ----NRKGYKGFQKEVQKCLRNAHYLKDRLLDAG 388 (476)
Q Consensus 359 ----~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g 388 (476)
+.+....-++.+++..+++..|++.|.+.+
T Consensus 410 D~a~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~ 443 (714)
T PRK15400 410 ETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLR 443 (714)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhCC
Confidence 222111236678888888888998887754
No 268
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.73 E-value=3.7e-15 Score=152.50 Aligned_cols=279 Identities=14% Similarity=0.093 Sum_probs=173.6
Q ss_pred HHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCc-EEEecCCCchHHHHHHHHcCC----------
Q 011842 138 RQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDG-ILYASRESHYSVFKAARMYRM---------- 206 (476)
Q Consensus 138 ~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~-~Vl~s~~~H~S~~~~~~~~G~---------- 206 (476)
.+++.++.+++++..+.+ ..+++++|++||..|+..++....++ +|......|.+........+.
T Consensus 70 ~~~~~~la~~l~~~~~~~----~~~~~~sG~~a~~~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~ 145 (377)
T PRK02936 70 NSLQEEVASLLAENSAGD----LVFFCNSGAEANEAALKLARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPL 145 (377)
T ss_pred CHHHHHHHHHHHhcCCCC----EEEEeCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCCcHHhhhccCCccccccCCCC
Confidence 478888888888876643 38999999999999999887542334 444545566665555544432
Q ss_pred --eEEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCcccccc----CHHHHHHHHHHhCCCCCceEEEEecCccc
Q 011842 207 --ECVKVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVD----DLDLVIQTLEESGFTQDRFYIHCDGALFG 280 (476)
Q Consensus 207 --~v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id----~l~~I~~ia~~~g~~~~~~~lhvD~a~~g 280 (476)
++..+|.+ |+++|++.+.+++ .+|++....++.|.+. .+++|.++|++||+ ++++|++|.+
T Consensus 146 ~~~~~~~~~~-----d~~~l~~~~~~~~---~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~-----~lI~DEv~~g 212 (377)
T PRK02936 146 LPGFTHVPFN-----DIKALKEVMNEEV---AAVMLEVVQGEGGVIPADPAFLQEVQTLCKKFGA-----LLIIDEVQTG 212 (377)
T ss_pred CCCceEeCCC-----CHHHHHHhccCCe---EEEEEecccCCCCCccCCHHHHHHHHHHHHHcCC-----EEEEeccccC
Confidence 12233333 7899999886543 4677766677666653 39999999999999 9999999976
Q ss_pred ccccccccCCCCCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHH
Q 011842 281 LMMPFVKKAPKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNR 360 (476)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~ 360 (476)
+.... ............|.++ +.|.+++++++|+++.++++.+.+.... + ..++. ..++.+.+++..
T Consensus 213 ~g~~g-~~~~~~~~~~~~di~t--~sK~l~~G~~ig~v~~~~~~~~~~~~~~-~----~~t~~-----~~~~~~aaa~a~ 279 (377)
T PRK02936 213 IGRTG-TLFAYEQFGLDPDIVT--VAKGLGNGIPVGAMIGKKELGTAFGPGS-H----GSTFG-----GNPLAMAAAKEV 279 (377)
T ss_pred CCcCc-hhhHHHhhCCCCcEEE--EcccccCCCccEEEEEcHHHHhhccCCC-C----CCCCC-----CCHHHHHHHHHH
Confidence 43221 1110000111246554 5799998889999999887766553211 1 01111 123444444444
Q ss_pred hChhcHHHHHHHHHHHHHHHHHHHHhc----CCeEeecCCeeEEEEecCCc-HHHh-----hceee-cccCCEEEEEEcC
Q 011842 361 KGYKGFQKEVQKCLRNAHYLKDRLLDA----GISAMLNELSSTVVFERPQD-EEFV-----RRWQL-ACQGNIAHVVVMP 429 (476)
Q Consensus 361 ~g~~g~~~~~~~~~~~a~~l~~~L~~~----g~~~~~~~~~~iv~f~~~~~-~~~~-----~~~~l-~~~~~~lRv~~~~ 429 (476)
+..-..++.+++..++.+++++.|++. +......+...++.+..+++ ..+. ++..+ +...+.+|++++.
T Consensus 280 l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~l~~~gv~v~~~g~~~lRi~p~~ 359 (377)
T PRK02936 280 LQVIKQPSFLEEVQEKGEYFLQKLQEELEHLECVKNIRGKGLMIGIECTEEVAPVIEQLREEGLLVLSAGPNVIRLLPPL 359 (377)
T ss_pred HHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCcEEeEeecceEEEEEecchHHHHHHHHHHCCeEEecCCCCEEEEECCc
Confidence 422112355677777888888888763 22111223344555555432 2222 22223 3344789999888
Q ss_pred CCCHHHHHHHHHHHHHH
Q 011842 430 NVTIDKLDDFLNELIEN 446 (476)
Q Consensus 430 ~~T~edid~~~~~l~~~ 446 (476)
.+|+++|+++++.|+++
T Consensus 360 ~~~~~~i~~~i~~l~~~ 376 (377)
T PRK02936 360 VVTKEELDQAVYLLKKV 376 (377)
T ss_pred ccCHHHHHHHHHHHHHh
Confidence 89999999999999764
No 269
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.73 E-value=3.5e-15 Score=150.47 Aligned_cols=267 Identities=10% Similarity=-0.062 Sum_probs=177.5
Q ss_pred HHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccCH
Q 011842 142 VGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGEIDC 221 (476)
Q Consensus 142 ~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~ 221 (476)
.++++++++.+|++. +.++++|+|+++++.... .+.. +++ |++..++|..+...++..|++++.++.+.
T Consensus 56 ~~L~~~ia~~~~~~~-~~~I~i~~Gs~e~i~~l~-~~~~--~g~-v~v~~P~y~~y~~~~~~~g~~~~~v~~~~------ 124 (339)
T PRK06959 56 DGLAACAARYYGAPD-AAHVLPVAGSQAAIRALP-ALLP--RGR-VGIAPLAYSEYAPAFARHGHRVVPLDEAA------ 124 (339)
T ss_pred HHHHHHHHHHhCCCC-cccEEECcCHHHHHHHHH-HhcC--CCe-EEEcCCCcHHHHHHHHHCCCEEEeecccc------
Confidence 467778899999973 235999999999986443 3332 666 77789999999999999999999888753
Q ss_pred HHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHH---HHHhCCCCCceEEEEecCcccccccccccCCCCCCc--c
Q 011842 222 ADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQT---LEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFK--K 296 (476)
Q Consensus 222 ~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~i---a~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~--~ 296 (476)
+.+ .+..+ ++++++|+|+||.+-+.+++.++ |++++. ++++|++|..+... .+..... .
T Consensus 125 ~~~----~~~~~---~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~-----~vI~DEay~~~~~~----~s~~~~~~~~ 188 (339)
T PRK06959 125 DTL----PAALT---HLIVVNPNNPTAERLPAARLLRWHAQLAARGG-----TLIVDEAFADTLPA----ASLAAHTDRP 188 (339)
T ss_pred hhc----cccCC---EEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCC-----EEEEECCCccCCCc----ccchhccCCC
Confidence 222 22223 67788899999999776665554 567888 99999999865321 1111111 2
Q ss_pred cccEEEEcCCCCCC-CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhc-HHHHHHHHH
Q 011842 297 PIGSVSVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKG-FQKEVQKCL 374 (476)
Q Consensus 297 ~~Dsi~~s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g-~~~~~~~~~ 374 (476)
+ -++..|+.|.++ +++++|++++++++++.+....... .. ..+.+.++...+.... .++..++..
T Consensus 189 ~-vi~l~SfSK~~gl~GlRiGy~v~~~~li~~l~~~~~~~-------~v-----s~~~q~a~~~~L~~~~~~~~~~~~~~ 255 (339)
T PRK06959 189 G-LVVLRSVGKFFGLAGVRAGFVLAAPALLAALRDALGAW-------TV-----SGPARHAVRAAFADAAWQAAMRERLA 255 (339)
T ss_pred C-EEEEecChhhcCCcchheEEEecCHHHHHHHHHhcCCC-------CC-----cHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 2 256678899886 8899999999988776664321110 11 1244555555543322 455667778
Q ss_pred HHHHHHHHHHHhcCCeEeecCCeeEEEEecCCcHHHh-----hceeec--ccCCEEEEEEcCCCCHHHHHHHHHHHHHHH
Q 011842 375 RNAHYLKDRLLDAGISAMLNELSSTVVFERPQDEEFV-----RRWQLA--CQGNIAHVVVMPNVTIDKLDDFLNELIENR 447 (476)
Q Consensus 375 ~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~~~~~~-----~~~~l~--~~~~~lRv~~~~~~T~edid~~~~~l~~~~ 447 (476)
+.++++.+.|++.|+... +..+.+.+..++..++. +++.+. ...+++|+++. .|.+++++|+++|+++.
T Consensus 256 ~~r~~l~~~L~~~g~~~~--~~~~f~~~~~~~~~~l~~~l~~~GI~vr~~~~~~~lRisi~--~~~~e~~~l~~al~~~~ 331 (339)
T PRK06959 256 ADGARLAALLRAHGFAVH--ATPLFSWTDDPRAAALHAALARRGIWTRYFAPPPSVRFGLP--ADEAEWQRLEDALAECV 331 (339)
T ss_pred HHHHHHHHHHHHCCCCcc--CcceEEEEeCCCHHHHHHHHHhCCeEEEECCCCCeEEEECC--CCHHHHHHHHHHHHHHH
Confidence 889999999999876433 23344455554433332 233332 12357888863 47789999999999988
Q ss_pred HHHHh
Q 011842 448 STWYE 452 (476)
Q Consensus 448 ~~~~~ 452 (476)
+.+..
T Consensus 332 ~~~~~ 336 (339)
T PRK06959 332 PTLAA 336 (339)
T ss_pred HHHhh
Confidence 77653
No 270
>PRK07049 methionine gamma-lyase; Validated
Probab=99.73 E-value=1.7e-15 Score=156.91 Aligned_cols=212 Identities=17% Similarity=0.181 Sum_probs=156.3
Q ss_pred HHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHH----HHHcCCeEEEEeCCCCCc
Q 011842 143 GVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKA----ARMYRMECVKVDCLISGE 218 (476)
Q Consensus 143 ~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~----~~~~G~~v~~v~~~~~g~ 218 (476)
.+.+.++++.|.+. .++++||+.|+..++.+... +|+.|+++.+.|..+... ++.+|++++.++. .
T Consensus 87 ~Le~~lA~leg~~~----~iv~~sG~~Ai~~~l~al~~--~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi~~v~~~~----~ 156 (427)
T PRK07049 87 IVEDRLAVYEGAES----AALFSSGMSAIATTLLAFVR--PGDVILHSQPLYGGTETLLAKTFRNFGVGAVGFAD----G 156 (427)
T ss_pred HHHHHHHHHhCCCc----EEEEccHHHHHHHHHHHHhC--CCCEEEEcCCCcccHHHHHHHHHHhcCcEEEEEeC----C
Confidence 34455777777552 88999999998888888776 999999999999877554 3557888777762 2
Q ss_pred cCHHHHHHHHHcC--CCCcEEEEEeeCCCccccccCHHHHHHHHHH------hCCCCCceEEEEecCcccccccccccCC
Q 011842 219 IDCADFKAKLLQN--KDKPAIINVNIGTTVKGAVDDLDLVIQTLEE------SGFTQDRFYIHCDGALFGLMMPFVKKAP 290 (476)
Q Consensus 219 ~D~~~Le~~l~~~--~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~------~g~~~~~~~lhvD~a~~g~~~~~~~~~~ 290 (476)
.|+++|++.|.+. ..++.+|.+.+++|++|.+-|+++|.+++++ +++ ++++|++|...... .+
T Consensus 157 ~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~-----~vvvDety~~~~~~----~p 227 (427)
T PRK07049 157 LSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRP-----IIACDNTLLGPVFQ----KP 227 (427)
T ss_pred CCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCC-----EEEEECCccccccC----Cc
Confidence 4788888887532 1234588888999999999999999999998 788 99999998654321 11
Q ss_pred CCCCcccccEEEEcCCCCCC--CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHH
Q 011842 291 KVSFKKPIGSVSVSGHKFVG--CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQK 368 (476)
Q Consensus 291 ~~~~~~~~Dsi~~s~hK~l~--~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~ 368 (476)
+ ...+|++..|+.|+++ ..+++|+++.++++.+.+.....++ ++ ...++.+|++++.+ +.+..
T Consensus 228 -l--~~g~divv~S~SK~~gG~~glr~G~vv~~~~l~~~l~~~~~~~--------g~--~ls~~~a~l~~r~L--~tl~~ 292 (427)
T PRK07049 228 -L--EHGADLSVYSLTKYVGGHSDLVAGAVLGRKALIRQVRALRSAI--------GT--QLDPHSCWMLGRSL--ETLVL 292 (427)
T ss_pred -c--ccCCCEEEEcCceeecCCCCcEEEEEECCHHHHHHHHHHHHhc--------CC--CCCHHHHHHHHcCC--ChHHH
Confidence 1 1237899999999998 4678999998877666553221111 11 13356777766654 56788
Q ss_pred HHHHHHHHHHHHHHHHHhcC
Q 011842 369 EVQKCLRNAHYLKDRLLDAG 388 (476)
Q Consensus 369 ~~~~~~~~a~~l~~~L~~~g 388 (476)
++++..++++.+.+.|++.+
T Consensus 293 R~~~~~~~a~~la~~L~~~p 312 (427)
T PRK07049 293 RMERANRNARAVAEFLRDHP 312 (427)
T ss_pred HHHHHHHHHHHHHHHHHhCC
Confidence 88888999999999999975
No 271
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.73 E-value=5.2e-15 Score=152.33 Aligned_cols=287 Identities=14% Similarity=0.086 Sum_probs=171.9
Q ss_pred HHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCC-----cEEEecCCCchHH-HHHHHHcCCeEE--
Q 011842 138 RQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPD-----GILYASRESHYSV-FKAARMYRMECV-- 209 (476)
Q Consensus 138 ~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~-----~~Vl~s~~~H~S~-~~~~~~~G~~v~-- 209 (476)
.+++.++.++++++.|.+ ..++|+||++|+..++.+++..... +.|++...++..+ ..+....+....
T Consensus 80 ~~~~~~la~~l~~~~~~~----~v~~~~gg~eA~~~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~ 155 (396)
T PRK02627 80 IEPQEELAEKLVELSGMD----KVFFCNSGAEANEAAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQE 155 (396)
T ss_pred CHHHHHHHHHHHhhcCCC----EEEECCCcHHHHHHHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCccccc
Confidence 377788889999987764 3999999999999999988763221 5566665554333 233222222211
Q ss_pred -EEeCCCCC----ccCHHHHHHHHHcCCCCcEEEEEeeCCCccccc----cCHHHHHHHHHHhCCCCCceEEEEecCccc
Q 011842 210 -KVDCLISG----EIDCADFKAKLLQNKDKPAIINVNIGTTVKGAV----DDLDLVIQTLEESGFTQDRFYIHCDGALFG 280 (476)
Q Consensus 210 -~v~~~~~g----~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~i----d~l~~I~~ia~~~g~~~~~~~lhvD~a~~g 280 (476)
..+...+. .-|+++|++++.++ +.+|+++...+++|.. +.+++|.++|++||+ ++++|++|++
T Consensus 156 ~~~~~~~~~~~~~~~d~~~l~~~i~~~---~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~-----~lI~DE~~~g 227 (396)
T PRK02627 156 GFEPLVEGFIYVPFNDIEALKAAITDK---TAAVMLEPIQGEGGVNPADKEYLQALRELCDENGI-----LLILDEVQTG 227 (396)
T ss_pred cCCCCCCCceEeCCCCHHHHHHhcCCC---eEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCC-----EEEEechhcC
Confidence 11111110 11899999998543 3477776667777732 348999999999999 9999999986
Q ss_pred ccccccccCCCCCCcc-cccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHH
Q 011842 281 LMMPFVKKAPKVSFKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLN 359 (476)
Q Consensus 281 ~~~~~~~~~~~~~~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~ 359 (476)
+.... ...+ +.... ..|.++ +.|.++.++++|++++++++.+.+.... + ..++.. .++.+.++++
T Consensus 228 ~g~~g-~~~~-~~~~~~~pdi~t--~sK~~~~G~rig~~~~~~~~~~~~~~~~-~----~~t~~~-----~~~~~~aa~~ 293 (396)
T PRK02627 228 MGRTG-KLFA-YQHYGIEPDIMT--LAKGLGGGVPIGAVLAKEKVADVFTPGD-H----GSTFGG-----NPLACAAALA 293 (396)
T ss_pred CCccC-ceee-ehhcCCCCCEEE--EcchhhCCcccEEEEEcHHHHhccCCCC-C----CCCCCC-----CHHHHHHHHH
Confidence 53321 1110 11111 256655 4598888899999999988766553211 1 011211 2344444433
Q ss_pred HhChhcHHHHHHHHHHHHHHHHHHHHhc----CCeEeecCCeeEEEEecC-CcHHHh-----hceeec-ccCCEEEEEEc
Q 011842 360 RKGYKGFQKEVQKCLRNAHYLKDRLLDA----GISAMLNELSSTVVFERP-QDEEFV-----RRWQLA-CQGNIAHVVVM 428 (476)
Q Consensus 360 ~~g~~g~~~~~~~~~~~a~~l~~~L~~~----g~~~~~~~~~~iv~f~~~-~~~~~~-----~~~~l~-~~~~~lRv~~~ 428 (476)
.+..-..++..++..++.+++++.|++. +..........++.+..+ ....+. ++..+. ...+.+|++++
T Consensus 294 ~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~l~~~Gv~v~~~~~~~lRi~~~ 373 (396)
T PRK02627 294 VIEIIEEEGLLENAAEVGEYLRAKLRELLEKYPGIKEVRGLGLMIGIELDRPAAEIVKKALEKGLLINVTGDNVLRLLPP 373 (396)
T ss_pred HHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCeeeeccCcEEEEEEecCcHHHHHHHHHHCCeEEeecCCCEEEEECC
Confidence 3311111345566666777777776653 222222233344555443 222222 233343 33477999888
Q ss_pred CCCCHHHHHHHHHHHHHHHHHH
Q 011842 429 PNVTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 429 ~~~T~edid~~~~~l~~~~~~~ 450 (476)
..+|+++|+++++.|+++.+++
T Consensus 374 ~~~~~~~i~~~~~~l~~~l~~~ 395 (396)
T PRK02627 374 LIISKEEIDEAVDRLEEVLKEL 395 (396)
T ss_pred cccCHHHHHHHHHHHHHHHHhh
Confidence 8899999999999999887653
No 272
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.72 E-value=6.7e-15 Score=151.98 Aligned_cols=280 Identities=12% Similarity=0.063 Sum_probs=172.1
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhC-------CCcEEEecCCCchHHHHHHHHcC------
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVF-------PDGILYASRESHYSVFKAARMYR------ 205 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~-------p~~~Vl~s~~~H~S~~~~~~~~G------ 205 (476)
+...++.+.++++.+.+ ..+++++|++||..|+..+|... ++.+|......|.+...+..+.|
T Consensus 82 ~~~~~l~~~l~~~~~~~----~~~~~~sGseA~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~ 157 (403)
T PRK05093 82 EPALRLAKKLIDATFAE----RVFFANSGAEANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSD 157 (403)
T ss_pred HHHHHHHHHHHhhCCCC----EEEEeCchHHHHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhh
Confidence 33457777788877653 38999999999999999987642 34456666667776554433221
Q ss_pred ------CeEEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCcc-ccccC----HHHHHHHHHHhCCCCCceEEEE
Q 011842 206 ------MECVKVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVK-GAVDD----LDLVIQTLEESGFTQDRFYIHC 274 (476)
Q Consensus 206 ------~~v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~t-G~id~----l~~I~~ia~~~g~~~~~~~lhv 274 (476)
.+++.+|.+ |++++++.+.+++ .+|+++ |.+++ |.+.+ +++|.++|++||+ ++++
T Consensus 158 ~~~~~~~~~~~~~~~-----d~~~l~~~l~~~~---aaiiie-p~~~~gg~~~~~~~~l~~l~~l~~~~g~-----~lI~ 223 (403)
T PRK05093 158 GFGPKPADITHVPFN-----DLAAVKAVIDDHT---CAVVVE-PIQGEGGVIPATPEFLQGLRELCDQHNA-----LLIF 223 (403)
T ss_pred cCCCCCCCcEEeCCC-----CHHHHHHHhcCCe---EEEEEe-cccCCCCCccCCHHHHHHHHHHHHHcCC-----EEEE
Confidence 124445444 8899999886443 466666 54444 44433 9999999999999 9999
Q ss_pred ecCcccccccccccCCCCCCcc-cccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHH
Q 011842 275 DGALFGLMMPFVKKAPKVSFKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIF 353 (476)
Q Consensus 275 D~a~~g~~~~~~~~~~~~~~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~ 353 (476)
|++|+++... .+..+ ..... ..|.++ +.|.+++++++|+++.++++.+.+.... + ..++.+ .++.
T Consensus 224 DEv~~g~g~~-g~~~~-~~~~~~~pdi~s--~sK~l~~G~rig~vv~~~~i~~~l~~~~-~----~~t~~~-----~~~~ 289 (403)
T PRK05093 224 DEVQTGMGRT-GDLFA-YMHYGVTPDILT--SAKALGGGFPIGAMLTTAEIASHFKVGT-H----GSTYGG-----NPLA 289 (403)
T ss_pred echhhCCCCC-ccchh-hhhcCCCCCEEE--ecccccCCcceEEEEEcHHHHhhcCCCC-C----CCCCCC-----CHHH
Confidence 9999864332 21111 11111 256554 4699988899999999988766653211 0 112211 2334
Q ss_pred HHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCC--eEe--ecCCeeEEEEecCC-----cHHHh-----hceeecc-
Q 011842 354 LWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGI--SAM--LNELSSTVVFERPQ-----DEEFV-----RRWQLAC- 418 (476)
Q Consensus 354 ~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~--~~~--~~~~~~iv~f~~~~-----~~~~~-----~~~~l~~- 418 (476)
++++++.+....-.+..++..++.++|.+.|++.+. ... .+....++.+..++ ..++. ++..+..
T Consensus 290 ~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~G~~~~~~l~~~~~~~~~~~~~~l~~~Gv~v~~~ 369 (403)
T PRK05093 290 CAVAEAVFDIINTPEVLEGVKARRQRFVDGLQKINQKYGVFSEIRGMGLLIGAELKPQYKGRARDFLNAAAEEGVMVLVA 369 (403)
T ss_pred HHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCeEeEeeCceEEEEEecCcchhHHHHHHHHHHHCCeEEecC
Confidence 444443221111134567788888999999988632 111 11223333333321 12232 2223333
Q ss_pred cCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 011842 419 QGNIAHVVVMPNVTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 419 ~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~ 450 (476)
..+.+|++++..+|+++|+.+++.|.++.+.+
T Consensus 370 g~~~lRl~~~~~~~~~~i~~~~~~l~~~l~~~ 401 (403)
T PRK05093 370 GPDVLRFAPSLVIEEADIDEGLARFEKAVAKV 401 (403)
T ss_pred CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 34789999898899999999999999887643
No 273
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.71 E-value=6.8e-15 Score=157.81 Aligned_cols=174 Identities=15% Similarity=0.144 Sum_probs=134.3
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHH-HHHcCCeEEEEeCCC--
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKA-ARMYRMECVKVDCLI-- 215 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~-~~~~G~~v~~v~~~~-- 215 (476)
..-.+..+..|+++|.+.. -++|+|+|.+|..++.++.. ||+.|++++..|-|+..+ ..+.|+.+++++...
T Consensus 174 G~i~eAq~~AA~~fgAd~t---yFlvNGTS~gn~a~i~a~~~--~Gd~VLvdRN~HKSv~hgaLiLsGa~PVYl~P~~n~ 248 (720)
T PRK13578 174 GAAKDAQKHAAKVFNADKT---YFVLNGTSASNKVVTNALLT--PGDLVLFDRNNHKSNHHGALIQAGATPVYLETARNP 248 (720)
T ss_pred hHHHHHHHHHHHHhCCCce---EEEeCChhHHHHHHHHHhcC--CCCEEEeecccHHHHHHHHHHHcCCeEEEeeccccc
Confidence 4456777889999999864 67889999999999998886 999999999999999995 889999999987643
Q ss_pred C---CccCH-----HHHHHHHHcC-CC-----Cc-EEEEEeeCCCccccccCHHHHHHH-HHHhCCCCCceEEEEecCcc
Q 011842 216 S---GEIDC-----ADFKAKLLQN-KD-----KP-AIINVNIGTTVKGAVDDLDLVIQT-LEESGFTQDRFYIHCDGALF 279 (476)
Q Consensus 216 ~---g~~D~-----~~Le~~l~~~-~~-----~p-~~vv~t~gtt~tG~id~l~~I~~i-a~~~g~~~~~~~lhvD~a~~ 279 (476)
. |.++. +.++++|.++ .. +| .++++|++ |+.|.+.++++|+++ ++.++ +||+|+|||
T Consensus 249 ~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~p-TYdG~~ydi~~I~~~~~h~~~------~llvDEAhg 321 (720)
T PRK13578 249 FGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLG-TYDGTIYNARQVVDKIGHLCD------YILFDSAWV 321 (720)
T ss_pred cCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECC-CCcceeecHHHHHHHhhccCC------cEEEeCcch
Confidence 2 34565 4499999876 22 45 56777655 588999999999999 56666 699999998
Q ss_pred cccccc--cccCCCCCCccccc----EEEEcCCCCCCCCCCceeEEeehhh
Q 011842 280 GLMMPF--VKKAPKVSFKKPIG----SVSVSGHKFVGCPMPCGVQITRMEH 324 (476)
Q Consensus 280 g~~~~~--~~~~~~~~~~~~~D----si~~s~hK~l~~p~~~G~l~~~~~~ 324 (476)
+..... .+..+......++| +++-|.||.+.+-...+++.+++.+
T Consensus 322 ah~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~alTQaS~LHvk~~~ 372 (720)
T PRK13578 322 GYEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHKKDNH 372 (720)
T ss_pred hhhccCcccccCChhhhhcCCCCCCeEEEEChhhcchhhhhHhhhhcCCcc
Confidence 764321 11222222334578 9999999999998889999887654
No 274
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.70 E-value=2.1e-14 Score=148.32 Aligned_cols=286 Identities=11% Similarity=0.057 Sum_probs=174.1
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhC------CCcEEEe-cCCCchHHHHHHHHcCCe----
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVF------PDGILYA-SRESHYSVFKAARMYRME---- 207 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~------p~~~Vl~-s~~~H~S~~~~~~~~G~~---- 207 (476)
+...++.+.++++.+.+ ..+++++|++||..|+.++|... ++..|+. ...-|.+...+..+.+..
T Consensus 81 ~~~~~la~~l~~~~~~~----~v~~~~sGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~ 156 (406)
T PRK12381 81 EPVLRLAKKLIDATFAD----RVFFCNSGAEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQ 156 (406)
T ss_pred HHHHHHHHHHHhhCCCC----eEEEcCCcHHHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCccccc
Confidence 44456677777777653 38999999999999999998642 3344544 444555544444433321
Q ss_pred --------EEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCcccc-----ccCHHHHHHHHHHhCCCCCceEEEE
Q 011842 208 --------CVKVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGA-----VDDLDLVIQTLEESGFTQDRFYIHC 274 (476)
Q Consensus 208 --------v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~-----id~l~~I~~ia~~~g~~~~~~~lhv 274 (476)
+..+|.+ |+++|++.+.++ ..+|+++ |...+|. .+.+++|.++|++||+ ++++
T Consensus 157 ~~~~~~~~~~~~~~~-----d~~~l~~~l~~~---~aaviiE-Pv~~~gg~~~~~~~~l~~l~~l~~~~~~-----llI~ 222 (406)
T PRK12381 157 DFAPLPPDIRHAAYN-----DLNSASALIDDQ---TCAVIVE-PIQGEGGVIPADKAFLQGLRELCDRHNA-----LLIF 222 (406)
T ss_pred CCCCCCCCeeEeCCC-----CHHHHHHhccCC---eeEEEEe-CCcCCCCCcCCCHHHHHHHHHHHHHcCC-----EEEE
Confidence 2333333 789999988643 3466664 5444443 3569999999999999 9999
Q ss_pred ecCcccccccccccCCCCCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHH
Q 011842 275 DGALFGLMMPFVKKAPKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFL 354 (476)
Q Consensus 275 D~a~~g~~~~~~~~~~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~ 354 (476)
|++|.|+... ......-...-..|.+ ++.|.++.++++|+++.++++.+.+.... + ..++.++. ......
T Consensus 223 DEv~tG~gr~-G~~~~~~~~~v~pDi~--t~sK~l~gG~~ig~~~~~~~~~~~~~~~~-~----~~t~~~~p--l~~aaa 292 (406)
T PRK12381 223 DEVQTGVGRT-GELYAYMHYGVTPDVL--TTAKALGGGFPIGAMLTTEKCASVMTVGT-H----GTTYGGNP--LASAVA 292 (406)
T ss_pred cchhhCCCCC-cchhhhHhhCCCCCEE--EehhhhhCCCceEEEEEcHHHHhhcCCCC-C----CCCCCCCH--HHHHHH
Confidence 9999665322 1111000011125765 45599988899999999988876653211 1 11222221 222223
Q ss_pred HHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcC--CeEee--cCCeeEEEEecCCc-----HHH-----hhceeec-cc
Q 011842 355 WYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAG--ISAML--NELSSTVVFERPQD-----EEF-----VRRWQLA-CQ 419 (476)
Q Consensus 355 ~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g--~~~~~--~~~~~iv~f~~~~~-----~~~-----~~~~~l~-~~ 419 (476)
.++++.+. -++.+++..++.++|.+.|++.+ ...+. .....++.+..+++ ..+ .+++.+. ..
T Consensus 293 ~a~l~~l~---~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~Gl~~~~~l~~~~~~~~~~~~~~l~~~Gv~v~~~g 369 (406)
T PRK12381 293 GKVLELIN---TPEMLNGVKQRHDWFVERLNTINARYGLFSEIRGLGLLIGCVLNAEYAGKAKQISQEAAKAGVMVLIAG 369 (406)
T ss_pred HHHHHHHh---hccHHHHHHHHHHHHHHHHHHHHhhCCCEEEEecCeEEEEEEecCchhhHHHHHHHHHHHCCcEEeeCC
Confidence 33343432 23567888888999999988763 21111 11123333333221 122 1233333 23
Q ss_pred CCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhcCC
Q 011842 420 GNIAHVVVMPNVTIDKLDDFLNELIENRSTWYEDGK 455 (476)
Q Consensus 420 ~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~~~~~ 455 (476)
.+.+|++++..+|+++||++++.|+++.+++.++|.
T Consensus 370 ~~~lRl~p~~~~t~~~i~~~~~~l~~~l~~~~~~~~ 405 (406)
T PRK12381 370 PNVVRFAPALNISEEEITTGLDRFARACERFVSRGS 405 (406)
T ss_pred CCEEEEeCCccCCHHHHHHHHHHHHHHHHHHHhccC
Confidence 468999998889999999999999999988877663
No 275
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.70 E-value=8.1e-16 Score=155.26 Aligned_cols=286 Identities=16% Similarity=0.162 Sum_probs=177.7
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEE--cCCchhHHHHHHHHHHhhCCCcEEEecCCC---chHHHHHHHH-------
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYI--TNCGTEGNLHGILVGREVFPDGILYASRES---HYSVFKAARM------- 203 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~--t~ggt~An~~al~aa~~~~p~~~Vl~s~~~---H~S~~~~~~~------- 203 (476)
...++|+.+.+.+.++||++++ .|.+- ..+|+.||+.++.+..+ |||.|+.-+.. |.|.-.....
T Consensus 63 ~id~iE~la~~ra~~lF~~~~~-~w~anvqp~SGs~An~av~~aLl~--pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~ 139 (399)
T PF00464_consen 63 YIDEIEELAIERAKELFGAEPK-EWYANVQPHSGSQANLAVYMALLK--PGDTIMGLSLPHGGHLSHGSSVNFKKISASG 139 (399)
T ss_dssp HHHHHHHHHHHHHHHHHT-STT-TEEEE---SSHHHHHHHHHHHHT---TT-EEEEEEGGGT--GGGT-TTSHSBSSHHH
T ss_pred hhhHHHHHHHHHHHHHhCCCcc-cceEEeecCCchHHHHHHHHHHHh--hcCcEEecChhhccccccccccccccccccc
Confidence 3568999999999999999853 44443 46999999999998887 99998866654 4443222222
Q ss_pred cCCeEEEEeCC-CCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCccccc
Q 011842 204 YRMECVKVDCL-ISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLM 282 (476)
Q Consensus 204 ~G~~v~~v~~~-~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~ 282 (476)
...+++.++++ +++.+|++.+++.+.+. +|.+|++ |.+..-...|++++.+||++.|. +|++|.+|-.+.
T Consensus 140 ~~~~~~~y~~d~~~~~ID~d~l~~~a~~~--kPklIi~--G~S~y~~~~d~~~~reIad~vga-----~l~~D~sH~~GL 210 (399)
T PF00464_consen 140 LYFESVPYPVDPDTGLIDYDELEKLAKEH--KPKLIIC--GASSYPRPIDFKRFREIADEVGA-----YLMADISHIAGL 210 (399)
T ss_dssp HHSEEEEEEB-TTTSSB-HHHHHHHHHHH----SEEEE--E-SSTSS---HHHHHHHHHHTT------EEEEE-TTTHHH
T ss_pred ceEEEEeeeeecCCCeECHHHHHHHHhhc--CCCEEEE--CchhccCccCHHHHHHHHHhcCc-----EEEecccccccc
Confidence 23578888988 57999999999999865 3447776 43344456789999999999999 999999996554
Q ss_pred ccccccCCCCCCcccccEEEEcCCCCCCCCCCceeEEee--------------hhhhhhhcCCccccCCCCCcccCCCCC
Q 011842 283 MPFVKKAPKVSFKKPIGSVSVSGHKFVGCPMPCGVQITR--------------MEHINVLSSNVEYLASRDATIMGSRNG 348 (476)
Q Consensus 283 ~~~~~~~~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~--------------~~~~~~l~~~~~yl~~~~~~~~~sr~~ 348 (476)
+.......++. .+|+++++.||.+.+| +.|+++++ .++.+.+... ++ +...++...
T Consensus 211 Ia~g~~~~P~~---~ADvvt~sThKtl~GP-rggiI~~~~~~~~~~~~~~~~~~~l~~~I~~a---vf---P~~qg~~h~ 280 (399)
T PF00464_consen 211 IAGGLFPNPFP---YADVVTGSTHKTLRGP-RGGIILTNKGSKNVDKKGKEIDEELAEKIDSA---VF---PGLQGGPHM 280 (399)
T ss_dssp HHTTSS--GCC---TSSEEEEESSGGG-SS-S-EEEEES-SEEEE-TTS-EEEHHHHHHHHHH---HT---TTT-SS--H
T ss_pred eehheecCccc---cceEEEeecccccccc-CceEEEEcCCccccCCcccccHHHHHHHhccc---cC---CCcccCcch
Confidence 43333333343 3899999999999965 56999988 2333332110 00 122333333
Q ss_pred hhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeec-CCeeEEEEecCC---c-HH---Hhhcee-----
Q 011842 349 HAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLN-ELSSTVVFERPQ---D-EE---FVRRWQ----- 415 (476)
Q Consensus 349 ~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~-~~~~iv~f~~~~---~-~~---~~~~~~----- 415 (476)
....++..+++......++++.++..+||+.|.+.|.+.|+.++.. ..+..|.+.... + .+ ..++..
T Consensus 281 ~~iaalAval~ea~~~~fk~Ya~qVv~NAk~La~~L~~~G~~v~~ggTd~H~vlvd~~~~~~~g~~a~~~Le~~gI~vnk 360 (399)
T PF00464_consen 281 HRIAALAVALKEALSPEFKEYAKQVVKNAKALAEALQERGFKVVTGGTDNHQVLVDLRSFGIDGKEAEKALEEAGIIVNK 360 (399)
T ss_dssp HHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTT-EEGGGS-SSSEEEEEGGGGTS-HHHHHHHHHHTTEE-EE
T ss_pred hHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHhhCCcEEEECCCCCCeEEEEecccccchHHHHHHHHhcCeeecc
Confidence 4455666677766566789999999999999999999999987653 235666666421 1 11 222211
Q ss_pred --eccc-----CCEEEEEEc----CCCCHHHHHHHHHHH
Q 011842 416 --LACQ-----GNIAHVVVM----PNVTIDKLDDFLNEL 443 (476)
Q Consensus 416 --l~~~-----~~~lRv~~~----~~~T~edid~~~~~l 443 (476)
+|.. ...+|+.+. ....++|+..+.+.|
T Consensus 361 n~iP~d~~~~~~sGlRlGT~~lT~rG~~e~dm~~iA~~I 399 (399)
T PF00464_consen 361 NTIPGDRSPFVPSGLRLGTPALTRRGMKEEDMKEIAELI 399 (399)
T ss_dssp E--TTTSTTTT-SEEEEESHHHHHTT--HHHHHHHHHHH
T ss_pred cccCCCCCCCCCCEEEECCHHHHhCCCCHHHHHHHHhhC
Confidence 2322 357999864 455788888776543
No 276
>PRK04311 selenocysteine synthase; Provisional
Probab=99.70 E-value=1.6e-14 Score=150.13 Aligned_cols=281 Identities=15% Similarity=0.141 Sum_probs=173.8
Q ss_pred HHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchH------HHHHHHHcCCeEEEEeCC
Q 011842 141 EVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYS------VFKAARMYRMECVKVDCL 214 (476)
Q Consensus 141 e~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S------~~~~~~~~G~~v~~v~~~ 214 (476)
...+.+.+++++|.+. .+++++|+.|++.++.+. .++++|++++..|++ +...++..|++++.++++
T Consensus 129 ~~~~e~~lA~l~Gae~----a~vv~sgtaAl~l~l~~l---~~GdeVIvs~~e~~~~ggs~~i~~~~~~~G~~l~~v~~~ 201 (464)
T PRK04311 129 DRALAALLCALTGAED----ALVVNNNAAAVLLALNAL---AAGKEVIVSRGELVEIGGAFRIPDVMRQAGARLVEVGTT 201 (464)
T ss_pred HHHHHHHHHHHhCCCe----EEEECCHHHHHHHHHHHh---CCCCEEEEcchhhhhcCcchhhHHHHHHCCcEEEEECCC
Confidence 3467788999999863 788999999998877543 388999999887763 334567789999999764
Q ss_pred CCCccCHHHHHHHHHcCCCCcEEEEEeeCCCc--cc--cccCHHHHHHHHHHhCCCCCceEEEEecCccccccccc----
Q 011842 215 ISGEIDCADFKAKLLQNKDKPAIINVNIGTTV--KG--AVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFV---- 286 (476)
Q Consensus 215 ~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~--tG--~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~---- 286 (476)
+..++++++++|.++|+ +|++.+.+++ +| ...|+++|+++|++||+ ++++|++.|.. .+..
T Consensus 202 --~~t~~~dle~aI~~~Tk---lV~~vh~sN~~i~G~~~~~dl~eI~~lak~~gi-----~vivD~gsG~l-~~~~~~gl 270 (464)
T PRK04311 202 --NRTHLRDYEQAINENTA---LLLKVHTSNYRIEGFTKEVSLAELAALGKEHGL-----PVVYDLGSGSL-VDLSQYGL 270 (464)
T ss_pred --CCCCHHHHHHhcCccCe---EEEEEcCCCccccccCCcCCHHHHHHHHHHcCC-----eEEEECCCccc-ccchhccC
Confidence 34689999999988775 7777777775 45 56799999999999999 99999975432 1111
Q ss_pred ccCCC-CCCc-ccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHh---
Q 011842 287 KKAPK-VSFK-KPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRK--- 361 (476)
Q Consensus 287 ~~~~~-~~~~-~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~--- 361 (476)
.+.+. .+.. .++|++++|+|||+++| .+|++++++++++.+.... .. ..+.... ....++.+.+..+
T Consensus 271 ~~~p~~~~~l~~GaDiv~fSg~K~LgGp-~~G~i~g~~~li~~l~~~~-~~----r~lr~dk--~~l~~l~~~l~~~~~~ 342 (464)
T PRK04311 271 PDEPTVQELLAAGVDLVTFSGDKLLGGP-QAGIIVGKKELIARLKKHP-LK----RALRVDK--LTLAALEATLRLYLDP 342 (464)
T ss_pred CCCCchhhHHhcCCcEEEecCcccccCC-ceEEEEEcHHHHHHHhhch-hH----HHHhcch--HHHHHHHHHHHHHhCh
Confidence 01111 1111 35999999999999987 5899999988776553211 10 0001111 1111122222211
Q ss_pred -----Ch---hcHHHHHHHHHHHHHHHHHHHHhcC---Ce-EeecC----------C----eeEEEEecC--CcHHHhhc
Q 011842 362 -----GY---KGFQKEVQKCLRNAHYLKDRLLDAG---IS-AMLNE----------L----SSTVVFERP--QDEEFVRR 413 (476)
Q Consensus 362 -----g~---~g~~~~~~~~~~~a~~l~~~L~~~g---~~-~~~~~----------~----~~iv~f~~~--~~~~~~~~ 413 (476)
+. .-+....++..++|+.+.+.|+... +. .+.+. . +..|.+... ....+.+.
T Consensus 343 ~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~gggs~p~~~~~~~~v~~~~~~~~~~~l~~~ 422 (464)
T PRK04311 343 EKLAEEIPTLRLLTRSPEELRARAERLAAALKAALGAAFAVEVVPSFSQVGGGSLPVDRLPSAAVTLTPKDRSLEALAAR 422 (464)
T ss_pred hhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhccCCCeeEEEEEccCccCCCCCcCCCCCeEEEEEeCCCCCHHHHHHH
Confidence 11 1233445777778888888888753 21 12211 1 223333322 12334343
Q ss_pred eeecccCCEE-----EEEEcC-CCCHHHHHHHHHHHHHHH
Q 011842 414 WQLACQGNIA-----HVVVMP-NVTIDKLDDFLNELIENR 447 (476)
Q Consensus 414 ~~l~~~~~~l-----Rv~~~~-~~T~edid~~~~~l~~~~ 447 (476)
+.-..-.-.. ++.+.+ ...++|++.+++.|+++.
T Consensus 423 lr~~~~~i~~r~~~~~~~ld~r~~~~~~~~~~~~~~~~~~ 462 (464)
T PRK04311 423 LRLLPPPVIGRIEDGRLLLDLRTLEEEDEERLAAALLEAL 462 (464)
T ss_pred HhcCCCCEEEEEECCEEEEEeCcCCHHHHHHHHHHHHHHh
Confidence 3321111111 233333 348899999999998875
No 277
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.70 E-value=6.9e-15 Score=151.58 Aligned_cols=219 Identities=13% Similarity=0.077 Sum_probs=152.3
Q ss_pred HHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHH----HHHcCCeEEEEeCCCCC
Q 011842 142 VGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKA----ARMYRMECVKVDCLISG 217 (476)
Q Consensus 142 ~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~----~~~~G~~v~~v~~~~~g 217 (476)
+++.+.++++.|... ++.|++|+.|+.+++.++.. +||+|+++...|.+.... +..+|+++..+..
T Consensus 64 ~~lE~~la~leg~~~----av~~~SG~aAi~~al~all~--~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~---- 133 (432)
T PRK06702 64 AAFEQKLAELEGGVG----AVATASGQAAIMLAVLNICS--SGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNP---- 133 (432)
T ss_pred HHHHHHHHHHhCCCc----EEEECCHHHHHHHHHHHhcC--CCCEEEECCCchHHHHHHHHHHHHHCCCEEEEECC----
Confidence 344455777788764 78999999999999987754 999999999998754443 6778999988854
Q ss_pred ccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCccc
Q 011842 218 EIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKP 297 (476)
Q Consensus 218 ~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~ 297 (476)
.+|++.|+++|.++|+ +|++++++++++.+.|+++|+++|++||+ ++++|.+++..... + ....+
T Consensus 134 ~~d~~~l~~~I~~~Tk---~I~~e~pgnP~~~v~Di~~I~~iA~~~gi-----~livD~T~~tP~~~---~----pl~~G 198 (432)
T PRK06702 134 NLTADEIVALANDKTK---LVYAESLGNPAMNVLNFKEFSDAAKELEV-----PFIVDNTLATPYLC---Q----AFEHG 198 (432)
T ss_pred CCCHHHHHHhCCcCCe---EEEEEcCCCccccccCHHHHHHHHHHcCC-----EEEEECCCCchhhC---C----hhhcC
Confidence 4699999999988876 77788899999999999999999999999 99999998633221 1 11124
Q ss_pred ccEEEEcCCCCCCCCCC-ceeEEe-ehh--hhh----hhc-CCcc-----ccCC---------C---CCcccCCCCChhH
Q 011842 298 IGSVSVSGHKFVGCPMP-CGVQIT-RME--HIN----VLS-SNVE-----YLAS---------R---DATIMGSRNGHAP 351 (476)
Q Consensus 298 ~Dsi~~s~hK~l~~p~~-~G~l~~-~~~--~~~----~l~-~~~~-----yl~~---------~---~~~~~~sr~~~~~ 351 (476)
+|+++-|..||+++... .|.+++ ... +.. .+. .... |... . .....|+. ..+
T Consensus 199 ADIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~sp 276 (432)
T PRK06702 199 ANIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVSYVQNFGAAAYIVKARVQLLRDYGNC--MSP 276 (432)
T ss_pred CCEEEEccccccCCCcceeceEEEeCCCcccccccccccccccccccccchhhccchhhHHHHHHHHHHHHccCC--CCH
Confidence 99999999999975322 222232 221 100 000 0000 0000 0 00001222 235
Q ss_pred HHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCC
Q 011842 352 IFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGI 389 (476)
Q Consensus 352 l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~ 389 (476)
+..|..++ |.+.+..++++..+++..+.+.|++.+.
T Consensus 277 ~~a~l~~r--gL~Tl~lR~~r~~~Na~~la~~L~~~p~ 312 (432)
T PRK06702 277 FNAYISNI--GLETLHLRMERHSENALAVAKWLADHER 312 (432)
T ss_pred HHHHHHHh--ccCcHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 56665554 4577899999999999999999999874
No 278
>PRK08354 putative aminotransferase; Provisional
Probab=99.70 E-value=9.9e-15 Score=145.45 Aligned_cols=148 Identities=14% Similarity=0.047 Sum_probs=113.9
Q ss_pred HHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccCHHH
Q 011842 144 VLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCAD 223 (476)
Q Consensus 144 ~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~~~ 223 (476)
+++++++.+|. ++++|+|+++++...+... . +++.|+++.++|+.+...++.+|++++.++ +|++.
T Consensus 45 l~~~ia~~~~~-----~I~vt~G~~~al~~~~~~~-~--~gd~vlv~~P~y~~~~~~~~~~g~~~~~~~------~d~~~ 110 (311)
T PRK08354 45 LEEEFSKLFGE-----PIVITAGITEALYLIGILA-L--RDRKVIIPRHTYGEYERVARFFAARIIKGP------NDPEK 110 (311)
T ss_pred HHHHHHHHHCC-----CEEECCCHHHHHHHHHHhh-C--CCCeEEEeCCCcHHHHHHHHHcCCEEeecC------CCHHH
Confidence 34567777773 2899999999987665432 2 899999999999999999999999997764 47889
Q ss_pred HHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCcccccE
Q 011842 224 FKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKPIGS 300 (476)
Q Consensus 224 Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~~Ds 300 (476)
|++.+.+ ++ ++++++|+|+||.+.+ +++|+++|++||+ |+++|++|+.+.... .. .+ .+ -.+
T Consensus 111 l~~~~~~-~~---~vi~~~P~NPTG~~~~~~~l~~l~~~a~~~~~-----~li~De~y~~f~~~~-~~---~~-~~-~vi 175 (311)
T PRK08354 111 LEELVER-NS---VVFFCNPNNPDGKFYNFKELKPLLDAVEDRNA-----LLILDEAFIDFVKKP-ES---PE-GE-NII 175 (311)
T ss_pred HHHhhcC-CC---EEEEecCCCCCCCccCHHHHHHHHHHhhhcCc-----EEEEeCcchhccccc-cc---cC-CC-cEE
Confidence 9888752 33 6777889999999865 6777788889999 999999998765431 11 11 11 235
Q ss_pred EEEcCCCCCC-CCCCceeEEe
Q 011842 301 VSVSGHKFVG-CPMPCGVQIT 320 (476)
Q Consensus 301 i~~s~hK~l~-~p~~~G~l~~ 320 (476)
++.|+.|.++ .++++|++++
T Consensus 176 ~~~S~SK~~~l~GlRiG~~v~ 196 (311)
T PRK08354 176 KLRTFTKSYGLPGIRVGYVKG 196 (311)
T ss_pred EEeccHhhcCCccceeeeeee
Confidence 6678889886 8899999998
No 279
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.70 E-value=1.9e-14 Score=149.56 Aligned_cols=225 Identities=13% Similarity=0.041 Sum_probs=151.0
Q ss_pred HHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHH-------hhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCC-
Q 011842 143 GVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGR-------EVFPDGILYASRESHYSVFKAARMYRMECVKVDCL- 214 (476)
Q Consensus 143 ~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~-------~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~- 214 (476)
++++.+++++|.+. .++|+|||+|+..++.++. ...||+.|+++.++|.+...++...|++++.++++
T Consensus 67 ~fe~~lA~~~g~~~----~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~~~G~~pv~vdvd~ 142 (438)
T PRK15407 67 AFEKKLAEFLGVRY----ALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPIIQNGLVPVFVDVEL 142 (438)
T ss_pred HHHHHHHHHhCCCe----EEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHHHHHHcCCEEEEEecCC
Confidence 34445667777753 8899999999999988763 23589999999999999999999999999999987
Q ss_pred CCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCC
Q 011842 215 ISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSF 294 (476)
Q Consensus 215 ~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~ 294 (476)
.++.+|++.|++++.++++ +|++++. .|...++++|.++|++||+ ++++|++|+.+.....+... .
T Consensus 143 ~~~~id~~~le~~i~~~tk---aVi~~~~---~G~p~dl~~I~~la~~~gi-----~vIeDaa~a~G~~~~g~~~G--~- 208 (438)
T PRK15407 143 PTYNIDASLLEAAVSPKTK---AIMIAHT---LGNPFDLAAVKAFCDKHNL-----WLIEDNCDALGSTYDGRMTG--T- 208 (438)
T ss_pred CcCCcCHHHHHHHcCcCCe---EEEEeCC---CCChhhHHHHHHHHHHCCC-----EEEEECccchhhhcCCeeee--c-
Confidence 4688999999999977664 6666654 4777899999999999999 99999999855432222111 1
Q ss_pred cccccEEEEc--CCCCCCCCCCceeEEeehhhh-hhhcCCccccCC-------------------C------CCcccCCC
Q 011842 295 KKPIGSVSVS--GHKFVGCPMPCGVQITRMEHI-NVLSSNVEYLAS-------------------R------DATIMGSR 346 (476)
Q Consensus 295 ~~~~Dsi~~s--~hK~l~~p~~~G~l~~~~~~~-~~l~~~~~yl~~-------------------~------~~~~~~sr 346 (476)
- .|.-++| ..|.+.++-| |+++++++.+ +.+.....+-.. . +..+....
T Consensus 209 -~-gd~~~fSf~~~k~~~~geG-G~l~t~d~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (438)
T PRK15407 209 -F-GDIATLSFYPAHHITMGEG-GAVFTNDPLLKKIIESFRDWGRDCWCAPGCDNTCGKRFGWQLGELPFGYDHKYTYSH 285 (438)
T ss_pred -c-CceEEEeCCCCCCccccCc-eEEEECCHHHHHHHHHHHHhCcccccccccccccccccccccccccccccccccccc
Confidence 1 2444444 4466666554 8999987632 211100000000 0 00000001
Q ss_pred CCh--hHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcC
Q 011842 347 NGH--APIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAG 388 (476)
Q Consensus 347 ~~~--~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g 388 (476)
.|. ..-.+.+++.....+.+++++++-+++++++.+.|.+.+
T Consensus 286 ~G~n~rmsel~AAig~~qL~~l~~~~~~R~~~a~~y~~~L~~~~ 329 (438)
T PRK15407 286 LGYNLKITDMQAAIGLAQLEKLPGFIEARKANFAYLKEGLASLE 329 (438)
T ss_pred cccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 111 011233334333456778899999999999999998764
No 280
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.69 E-value=4.7e-17 Score=159.40 Aligned_cols=243 Identities=17% Similarity=0.184 Sum_probs=161.3
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHH---HHHHcCCeEEEEeCCC
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFK---AARMYRMECVKVDCLI 215 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~---~~~~~G~~v~~v~~~~ 215 (476)
..-.++.+.+++++|.+. .+|+++||+||.+++.+... |+..|++...+|..... ...+.|++++.++.++
T Consensus 29 ~~~~~l~~~i~~l~g~e~----a~f~~sGT~An~~al~~~~~--~~~~vi~~~~aHi~~~E~ga~~~~~G~~~~~l~~~~ 102 (290)
T PF01212_consen 29 PTTARLEERIAELFGKEA----ALFVPSGTMANQLALRAHLR--PGESVICADTAHIHFDETGAIEELSGAKLIPLPSDD 102 (290)
T ss_dssp HHHHHHHHHHHHHHTSSE----EEEESSHHHHHHHHHHHHHH--TTEEEEEETTEHHHHSSTTHHHHHTTCEEEEEBECT
T ss_pred hhHHHHHHHHHHHcCCCE----EEEeCCCChHHHHHHHHHHh--cCCceeccccceeeeeccchhhHhcCcEEEECCCcc
Confidence 455566677888999874 67999999999999999885 99999999999987653 2356799999999876
Q ss_pred CCccCHHHHHHHHHcCC---CCcEEEEEeeCCCcc-ccc---cCHHHHHHHHHHhCCCCCceEEEEecCccccccccccc
Q 011842 216 SGEIDCADFKAKLLQNK---DKPAIINVNIGTTVK-GAV---DDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKK 288 (476)
Q Consensus 216 ~g~~D~~~Le~~l~~~~---~~p~~vv~t~gtt~t-G~i---d~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~ 288 (476)
+|.+|+++|++.+.+.. ..|.+|.++.+++.. |.+ +.|++|.++|++||+ .+|+|||--+-.......
T Consensus 103 ~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a~~~gl-----~lhmDGARl~~a~~~~~~ 177 (290)
T PF01212_consen 103 DGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAISELAREHGL-----PLHMDGARLANAAAALGV 177 (290)
T ss_dssp GTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHHHHHHT------EEEEEETTHHHHHCHHHH
T ss_pred cCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHHHhCce-----EEEEehhhHHHhhhcccc
Confidence 69999999999998743 456788887766653 554 568899999999999 999999952111100000
Q ss_pred CCCCCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHH-HHH--HHHHHhChhc
Q 011842 289 APKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPI-FLW--YTLNRKGYKG 365 (476)
Q Consensus 289 ~~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l-~~~--~~l~~~g~~g 365 (476)
..-+....+|+++++++|.++.|. -++++.++++++.......++.+. +. ..+..+. .++ .++.. .+.
T Consensus 178 -~~~e~~~~~D~v~~~~tK~~g~~~-Gavl~~~~~~i~~~~~~~k~~gg~---~~--~~G~~~a~~~~~~~~l~~--l~~ 248 (290)
T PF01212_consen 178 -SLAEIAAGADSVSFGGTKNGGAPG-GAVLAGNKEFIAKARRQRKRLGGG---MR--QAGVLAAAELYQFAALRA--LEL 248 (290)
T ss_dssp -HHHHHHTTSSEEEEETTSTT-SSS-EEEEEESHHHHHHHHHHHHHHTHH---HH--HTTHHHHHHHHHHHHHCH--EEC
T ss_pred -cHHHHhhhCCEEEEEEEccccccc-ceEEEechHHHHHHHHHHHHhccC---ee--ecceeeeechhhHHHHHH--HHh
Confidence 001223459999999999999654 567777777543322112222111 00 0111111 111 22222 233
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEE
Q 011842 366 FQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVV 401 (476)
Q Consensus 366 ~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~ 401 (476)
......+..+++++|.+.|++.|+....++.+|.++
T Consensus 249 ~~~~~~~~~~~A~~La~~l~~~~~~~~~~~~tn~~~ 284 (290)
T PF01212_consen 249 WLERARHANAMAKRLAAGLEALGGVLPRPVETNQVF 284 (290)
T ss_dssp SHHHHHCHHHHHHCHHHCHHEECEEEETTSS-HHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHCCCcccCCCCCcEEe
Confidence 366778888999999999999988755555565543
No 281
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.69 E-value=1.8e-14 Score=146.68 Aligned_cols=290 Identities=11% Similarity=0.109 Sum_probs=178.9
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHH-HHHcCCeEEEEeCC
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKA-ARMYRMECVKVDCL 214 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~-~~~~G~~v~~v~~~ 214 (476)
...+||++ +++++|.+. ++.|++||.|......+. ..||++| +.++|+.-..+ +...|+.++-++.+
T Consensus 72 s~~~lE~~----va~~~G~~~----av~v~sGT~Al~ll~~l~--l~pGDeV--psn~~f~Tt~ahIe~~Gav~vDi~~d 139 (450)
T TIGR02618 72 NFYHLERT----VRELYGFKY----VVPTHQGRGAENLLSQIA--IKPGDYV--PGNMYFTTTRYHQEKNGATFVDIIID 139 (450)
T ss_pred cHHHHHHH----HHHHHCCCe----EEEcCCHHHHHHHHHHhC--CCCcCEE--CCceeHHHHHHHHHhCCeEEEeeecc
Confidence 45677766 566788875 899999999966543232 3488877 56788665555 68888866666443
Q ss_pred ----------CCCccCHHHHHHHHHcCCC-CcEEEEEeeCCCcc-ccc---cCHHHHHHHHHHhCCCCCceEEEEecCcc
Q 011842 215 ----------ISGEIDCADFKAKLLQNKD-KPAIINVNIGTTVK-GAV---DDLDLVIQTLEESGFTQDRFYIHCDGALF 279 (476)
Q Consensus 215 ----------~~g~~D~~~Le~~l~~~~~-~p~~vv~t~gtt~t-G~i---d~l~~I~~ia~~~g~~~~~~~lhvD~a~~ 279 (476)
.+|.+|+++|+++|++.+. ...+|.+....+.. |.. .++++|.++|++||+ .+|.|+|+.
T Consensus 140 ea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl-----~vi~DaAR~ 214 (450)
T TIGR02618 140 EAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGI-----KVFYDATRC 214 (450)
T ss_pred cccccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCC-----EEEEEccch
Confidence 3589999999999986431 12244444444444 666 679999999999999 999999986
Q ss_pred cc-cc------cccccCCCC----CCcccccEEEEcCCCCCCCCCCceeEEeehh-hhhhhcCC-ccccCCCCCcccCCC
Q 011842 280 GL-MM------PFVKKAPKV----SFKKPIGSVSVSGHKFVGCPMPCGVQITRME-HINVLSSN-VEYLASRDATIMGSR 346 (476)
Q Consensus 280 g~-~~------~~~~~~~~~----~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~-~~~~l~~~-~~yl~~~~~~~~~sr 346 (476)
.. .+ +.....+.. +....+|++++|+||-.++|. .|+++++++ +.+..... ..| ..-.+ .|.-
T Consensus 215 ~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~~~~~-GG~l~~~d~~l~~k~r~~~~~~--eG~~t-yGgl 290 (450)
T TIGR02618 215 VENAYFIKEREQGYEDKSIAEILKEMMSYADGCTMSGKKDCLVNI-GGFLCMNDDEMFQSAKELVVVF--EGMPS-YGGL 290 (450)
T ss_pred hhChhhhhcccccccCCCHHHHHHHHhccCcEEEEeeccCCCCCC-ceEEEeCCHHHHHHHHHHhhhc--CCccc-cCch
Confidence 42 11 111111110 112358999999999999887 466666765 44433221 122 11011 1111
Q ss_pred CChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEec----CC--cH-----HHhhcee
Q 011842 347 NGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFER----PQ--DE-----EFVRRWQ 415 (476)
Q Consensus 347 ~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~----~~--~~-----~~~~~~~ 415 (476)
.+....++..++...- -+...++....++||.+.|.+.|+.++.+..++.|++.. |. .. .+...+.
T Consensus 291 a~r~~~ala~gL~e~~---~~~y~~~r~~~a~~La~~L~~~Gvpv~~p~ggh~V~vda~~~lph~~~~~~p~~al~~~ly 367 (450)
T TIGR02618 291 AGRDMEAMAIGIREAV---DYEYIEHRVKQVRYLGDKLKAAGVPIVEPVGGHAVFLDARRFLPHIPQDQFPAQSLAASIY 367 (450)
T ss_pred hhhhHHHHHHHHHHhh---hHHHHHHHHHHHHHHHHHHHHCCCcccCCCCcceEEEEhHHhCCCCChhhChHHHHHHHHH
Confidence 1111112222332211 135566667789999999999998776677788888752 21 11 1111111
Q ss_pred ---------e--------cc-------cCCEEEEEEcCC-CCHHHHHHHHHHHHHHHHH
Q 011842 416 ---------L--------AC-------QGNIAHVVVMPN-VTIDKLDDFLNELIENRST 449 (476)
Q Consensus 416 ---------l--------~~-------~~~~lRv~~~~~-~T~edid~~~~~l~~~~~~ 449 (476)
+ +. .-..+|+.+... .|.+++|.+.+.|..+.+.
T Consensus 368 ~~~gir~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~ 426 (450)
T TIGR02618 368 VETGVRSMERGIVSAGRNNVTGEHHRPKLELVRLTIPRRVYTYAHMDVVADGIIKLYKH 426 (450)
T ss_pred HHhCccEEeecceecccCCCCCcccCCccceeeeccccccccHhHHHHHHHHHHHHHhh
Confidence 0 11 124678876544 4999999999999888654
No 282
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.68 E-value=3.1e-14 Score=142.89 Aligned_cols=318 Identities=12% Similarity=-0.033 Sum_probs=207.9
Q ss_pred CCcCCcchHHHHHHHHHhhCCCC---CCcccCccchhhHHHHHHHHHHHHHHcCCCCCcccEEEcCC-chhHHHHHHHHH
Q 011842 103 PYNLDFDYGALAQLQHFSINNLG---DPFIESNYGVHSRQFEVGVLDWFARLWELENNEYWGYITNC-GTEGNLHGILVG 178 (476)
Q Consensus 103 p~~~~~~~~~l~~~l~~~~n~~g---~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~g~~t~g-gt~An~~al~aa 178 (476)
|.....+...+.++....+|..+ +..+.++.+....++.+++.+.++++++.+. ++..+|.+| ||.+.-.+.+..
T Consensus 10 aGPa~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~~F~~i~~~~~~~Lr~Ll~~P~-~y~Vlfl~GggT~~~ea~~~Nl 88 (364)
T PRK12462 10 GGPGALPDTVLEQVRQAVVELPETGLSVLGMSHRSSWFSSLLAQAEADLRDLLGIPD-EYGVVFLQGGSSLQFSMIPMNF 88 (364)
T ss_pred CCCcCCCHHHHHHHHHHHhcccccCccccccccccHHHHHHHHHHHHHHHHHhCCCC-CCeEEEEeccHHHHHHHHHHHc
Confidence 44444455667777666666333 3345566666778899999999999999974 356777666 555555555555
Q ss_pred HhhCCCcEEE-ecCCCchH--HHHHHHHcCCeEEEEeCCC----CCccCHHHHHHHHHcCCCCcEEEEEeeCCCcccccc
Q 011842 179 REVFPDGILY-ASRESHYS--VFKAARMYRMECVKVDCLI----SGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVD 251 (476)
Q Consensus 179 ~~~~p~~~Vl-~s~~~H~S--~~~~~~~~G~~v~~v~~~~----~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id 251 (476)
.. +++.++ +-...++| +.+.++.+| ++..+...+ ..-.+++.+ .+.++ ..+|.+++..|.+|...
T Consensus 89 l~--~g~~~~~~~~tG~fg~r~~~ea~~~g-~v~~~~~~~~~~~~~~p~~~~~--~~~~d---~~~v~~t~NETstGv~~ 160 (364)
T PRK12462 89 SR--PGAAAPEYVTTGYWSRKAIGEASRVA-AMRVVWDGAASGYRTLPSLAEL--DWDAR---APFRHYVSNETVEGLQF 160 (364)
T ss_pred CC--CCCcEEEEEeCCHHHHHHHHHHHhcC-CceEecCcCCCCCCcCCCHHHh--ccCCC---CcEEEEccCCCCceEec
Confidence 44 666332 33345555 455666666 555554211 123455554 12222 24788999999999998
Q ss_pred CHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcC-
Q 011842 252 DLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSS- 330 (476)
Q Consensus 252 ~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~- 330 (476)
| ++.+.++. +++||++.+.+..| +++.+ .|.+..+++|.+| |.|.++++++++.++....
T Consensus 161 ~-----~~~~~~~~-----llvvD~sS~~~s~p-------id~~~-~dvi~agsQKnlg-P~Gltvvivs~~al~~~~~~ 221 (364)
T PRK12462 161 P-----DAAGLPDS-----PLIADMSSDFMSRP-------FDVEA-YGMVYAHAQKNLG-PAGVTVAIIRRALLERVPDT 221 (364)
T ss_pred C-----cccccCCC-----eEEEEcCchhhCCC-------CChHH-ccEEEeeccccCC-CCceEEEEECHHHHhhcccc
Confidence 6 33334678 99999997665554 55544 4999999999999 9999999999997755432
Q ss_pred CccccCC----CCCcccCCCCChhHHHHHHHHHHhChh--cHHHHHHHHHHHHHHHHHHHHhcC-CeEee-cCC---eeE
Q 011842 331 NVEYLAS----RDATIMGSRNGHAPIFLWYTLNRKGYK--GFQKEVQKCLRNAHYLKDRLLDAG-ISAML-NEL---SST 399 (476)
Q Consensus 331 ~~~yl~~----~~~~~~~sr~~~~~l~~~~~l~~~g~~--g~~~~~~~~~~~a~~l~~~L~~~g-~~~~~-~~~---~~i 399 (476)
.+.|+.- ...+...|++......+-.+++.+..+ |++++.++..+.++.+++.|.+.+ +.... .+. ...
T Consensus 222 ~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~id~~~~~~~~~~~~~~RS~mn 301 (364)
T PRK12462 222 LPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATLDALNEVIDCHAHRAARSTMN 301 (364)
T ss_pred CCchhhHHHHHhcCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcCcce
Confidence 2334321 112233466655556666777777666 999999999999999999999986 54432 221 256
Q ss_pred EEEecCCc---HHHhhce---ee---c--ccCCEEEEEEcCCCCHHHHHHHHHHHHHHHH
Q 011842 400 VVFERPQD---EEFVRRW---QL---A--CQGNIAHVVVMPNVTIDKLDDFLNELIENRS 448 (476)
Q Consensus 400 v~f~~~~~---~~~~~~~---~l---~--~~~~~lRv~~~~~~T~edid~~~~~l~~~~~ 448 (476)
|+|+.+++ ..|.+.. .+ . ..-+.+|+++-..++.|+++.|++-|++-.+
T Consensus 302 v~f~~~~~~l~~~f~~~a~~~gl~~lkGhr~vgg~Ras~yna~~~e~v~~L~~fm~~f~~ 361 (364)
T PRK12462 302 VAFRFRQPRLDTLFKEQSTEAGFCGLSGHRSIGGIRASLYNAVSEQAVSRLCAFLKDFAI 361 (364)
T ss_pred EEEEcCCHHHHHHHHHHHHHCCCccccCCcccCceEEEcCCCCCHHHHHHHHHHHHHHHH
Confidence 77776543 2232211 11 1 1125699999999999999999999987654
No 283
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.67 E-value=2e-14 Score=146.19 Aligned_cols=274 Identities=18% Similarity=0.228 Sum_probs=185.1
Q ss_pred cccCccchhhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHH----HH
Q 011842 128 FIESNYGVHSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAA----RM 203 (476)
Q Consensus 128 ~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~----~~ 203 (476)
+.+++.+ ..-...+.+.++.|.|.+. ++++++|..|+..++.+... +|+.|+++...|......+ ..
T Consensus 47 ~~Y~R~g---nPt~~~le~~la~Le~g~~----a~~~~SGmaAi~~~l~~ll~--~Gd~iv~~~~~Y~~t~~~~~~~l~~ 117 (386)
T PF01053_consen 47 YIYSRYG---NPTVRALEQRLAALEGGED----ALLFSSGMAAISAALLALLK--PGDHIVASDDLYGGTYRLLEELLPR 117 (386)
T ss_dssp CSBTTTC----HHHHHHHHHHHHHHT-SE----EEEESSHHHHHHHHHHHHS---TTBEEEEESSSSHHHHHHHHHCHHH
T ss_pred cceeccc---cccHHHHHHHHHHhhcccc----eeeccchHHHHHHHHHhhcc--cCCceEecCCccCcchhhhhhhhcc
Confidence 4444433 3555566667888888753 78899999999888888765 8999999998887655444 34
Q ss_pred cCCeEEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhC-CCCCceEEEEecCccccc
Q 011842 204 YRMECVKVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESG-FTQDRFYIHCDGALFGLM 282 (476)
Q Consensus 204 ~G~~v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g-~~~~~~~lhvD~a~~g~~ 282 (476)
.|+++..++.. |+++|+++++++++ +|.+..++|++..+.||++|+++|+++| + +++||..++..+
T Consensus 118 ~gv~v~~~d~~-----d~~~l~~~l~~~t~---~v~~EspsNP~l~v~Dl~~i~~~a~~~g~~-----~~vVDnT~atp~ 184 (386)
T PF01053_consen 118 FGVEVTFVDPT-----DLEALEAALRPNTK---LVFLESPSNPTLEVPDLEAIAKLAKEHGDI-----LVVVDNTFATPY 184 (386)
T ss_dssp TTSEEEEESTT-----SHHHHHHHHCTTEE---EEEEESSBTTTTB---HHHHHHHHHHTTT------EEEEECTTTHTT
T ss_pred cCcEEEEeCch-----hHHHHHhhccccce---EEEEEcCCCcccccccHHHHHHHHHHhCCc-----eEEeecccccee
Confidence 59999998765 89999999988765 8999999999999999999999999998 9 999999987653
Q ss_pred ccccccCCCCCCcccccEEEEcCCCCCCCCCC---ceeEEeeh--hhhhhhcCCccccCCCCCcccCCCCChhHHHHHHH
Q 011842 283 MPFVKKAPKVSFKKPIGSVSVSGHKFVGCPMP---CGVQITRM--EHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYT 357 (476)
Q Consensus 283 ~~~~~~~~~~~~~~~~Dsi~~s~hK~l~~p~~---~G~l~~~~--~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~ 357 (476)
.. + .+.-++|++.-|..|+++ +.+ .|++++++ ++.+.+......+ |.- ..+...|..
T Consensus 185 ~~--~-----pL~~GaDivv~S~TKyl~-Ghsdv~~G~vv~~~~~~~~~~l~~~~~~~--------G~~--~~p~da~ll 246 (386)
T PF01053_consen 185 NQ--N-----PLELGADIVVHSATKYLS-GHSDVMGGAVVVNGSSELYDRLREFRRLL--------GAT--LSPFDAWLL 246 (386)
T ss_dssp TC--------GGGGT-SEEEEETTTTTT-TSSSE-EEEEEESSHHHHHHHHHHHHHHH--------T-B----HHHHHHH
T ss_pred ee--c-----cCcCCceEEEeecccccc-CCcceeeEEEEECchhhhhhhhcchhhhc--------Ccc--chHHHHHHH
Confidence 31 0 111249999999999998 344 67788776 3444332211111 111 235666665
Q ss_pred HHHhChhcHHHHHHHHHHHHHHHHHHHHhcCCeE-eecC-----------------CeeEEEEecCCcH----HHhhcee
Q 011842 358 LNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISA-MLNE-----------------LSSTVVFERPQDE----EFVRRWQ 415 (476)
Q Consensus 358 l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~-~~~~-----------------~~~iv~f~~~~~~----~~~~~~~ 415 (476)
++ |.+.+.-++++..++|..+.+.|++.+... +..| ...++.|...+.. .|.+.+.
T Consensus 247 ~r--gl~Tl~~R~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~~~~~~~~f~~~l~ 324 (386)
T PF01053_consen 247 LR--GLRTLPLRMERQNENAEALAEFLEEHPKVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKGGEEAARRFLDALK 324 (386)
T ss_dssp HH--HHTTHHHHHHHHHHHHHHHHHHHHTSTTEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESSHHHHHHHHHHH-S
T ss_pred hc--CCCcHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEcccccccceeeeeecccccCceeEEEeccchhhhHhHHhhhh
Confidence 55 567889999999999999999999987543 3322 1257888876542 2333332
Q ss_pred e----------------cc-----------------cCCEEEEEEcCCCCHHHHHHHHHHHHHHH
Q 011842 416 L----------------AC-----------------QGNIAHVVVMPNVTIDKLDDFLNELIENR 447 (476)
Q Consensus 416 l----------------~~-----------------~~~~lRv~~~~~~T~edid~~~~~l~~~~ 447 (476)
+ +. ..+.+|+++. -||++.++++|+++.
T Consensus 325 l~~~~~SlGg~~SLi~~p~~~~h~~~~~e~~~~~Gi~~~liRlSvG----lEd~~dLi~Dl~~AL 385 (386)
T PF01053_consen 325 LFSIAPSLGGVESLISHPASTSHRSLSPEERAEAGISDGLIRLSVG----LEDPDDLIADLEQAL 385 (386)
T ss_dssp SSEESSS-SSSS-EEEETTCTTTTTSCHHHHHHTTS-TTEEEEE------SS-HHHHHHHHHHHH
T ss_pred hHhhhhhcCCcccccccccchhhccCChhhhhccCCCCCeeEEEec----cCCHHHHHHHHHHhc
Confidence 1 00 1256898886 567777777777664
No 284
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.67 E-value=6.1e-14 Score=144.13 Aligned_cols=284 Identities=13% Similarity=0.084 Sum_probs=179.6
Q ss_pred HHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhh------CCCcEEEecCCCchHHHHHHHHcCCeEE--
Q 011842 138 RQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREV------FPDGILYASRESHYSVFKAARMYRMECV-- 209 (476)
Q Consensus 138 ~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~------~p~~~Vl~s~~~H~S~~~~~~~~G~~v~-- 209 (476)
.+.+.++.+++.+..+.+ ..+|+++|++||..|+.+++.. .+..+|......|.+...++...|....
T Consensus 77 ~~~~~~la~~l~~~~~~~----~v~f~~SGseA~e~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~ 152 (395)
T PRK03715 77 NEPMAKLAGLLTQHSCFD----KVFFANSGAEANEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDT 152 (395)
T ss_pred CHHHHHHHHHHhhccCCC----EEEEeCCcHHHHHHHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCccccc
Confidence 367778888888765443 3899999999999999999853 1234566666778777777666654211
Q ss_pred -EEeCCCC----CccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC----HHHHHHHHHHhCCCCCceEEEEecCccc
Q 011842 210 -KVDCLIS----GEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD----LDLVIQTLEESGFTQDRFYIHCDGALFG 280 (476)
Q Consensus 210 -~v~~~~~----g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~----l~~I~~ia~~~g~~~~~~~lhvD~a~~g 280 (476)
..|.... ..-|+++|++.+.+. ..+|++....++.|.+.| +++|.++|++||+ ++++|++|.|
T Consensus 153 ~~~~~~~~~~~~~~~d~~~l~~~l~~~---~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~-----llI~DEv~tG 224 (395)
T PRK03715 153 IFAPQVPGFPKAELNDIASVEKLITDK---TVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGL-----LLIVDEVQTG 224 (395)
T ss_pred CCCCCCCCceeeCCchHHHHHHHcCCC---ceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCC-----EEEEeccccC
Confidence 1111111 123789999988643 346777766778888877 9999999999999 9999999986
Q ss_pred cccccccc-C-CCCCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHH
Q 011842 281 LMMPFVKK-A-PKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTL 358 (476)
Q Consensus 281 ~~~~~~~~-~-~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l 358 (476)
+ ....+. . ..+.. ..|.++++ |.++.+.++|.++++++.. .+. ..+. ..|+.+.. .......+++
T Consensus 225 ~-GRtG~~~a~~~~gv--~PDi~t~g--K~lg~G~p~~av~~~~~i~-~~~--~~~~---~~T~~g~p--l~~aaala~L 291 (395)
T PRK03715 225 C-GRTGTLFAYELSGI--EPDIMTLG--KGIGGGVPLAALLAKAEVA-VFE--AGDQ---GGTYNGNP--LMTAVGVAVI 291 (395)
T ss_pred C-CCCcchhhHhhcCC--CCceeeeh--hhhhCCcceEEEEEccccc-ccc--CCCc---CCCCCCCH--HHHHHHHHHH
Confidence 3 212211 0 01111 26877664 8888778899999988763 111 1111 12222221 1122233344
Q ss_pred HHhChhcHHHHHHHHHHHHHHHHHHHHhc----CCeEeecCCeeEEEEecCCc--HHH---hh-----ceee-cccCCEE
Q 011842 359 NRKGYKGFQKEVQKCLRNAHYLKDRLLDA----GISAMLNELSSTVVFERPQD--EEF---VR-----RWQL-ACQGNIA 423 (476)
Q Consensus 359 ~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----g~~~~~~~~~~iv~f~~~~~--~~~---~~-----~~~l-~~~~~~l 423 (476)
+.+.. ++.+++..++.++|+++|++. ++..+. ....++.+...++ ..+ .. ++.+ ....+.+
T Consensus 292 ~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~~~i~~vr-G~Glm~~i~l~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~l 367 (395)
T PRK03715 292 SQLLA---PGFLEGVRARGEYLKEKLLELSEERGLEGER-GEGLLRALLLGKDIGPQIVEKARDMQPDGLLLNAPRPNLL 367 (395)
T ss_pred HHHHh---ccHHHHHHHHHHHHHHHHHHHhhcCCcCeEE-cceeEEEEEecCchHHHHHHHHHhccCCCEEEeecCCCEE
Confidence 44422 456788888899999988764 332222 2234444444321 111 11 3333 2446789
Q ss_pred EEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 011842 424 HVVVMPNVTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 424 Rv~~~~~~T~edid~~~~~l~~~~~~~ 450 (476)
|++++..+|++|||.++++|+++.+.+
T Consensus 368 R~~p~l~~t~~ei~~~~~~l~~~l~~~ 394 (395)
T PRK03715 368 RFMPALNVTTEEIDQMIAMLRSVLDKL 394 (395)
T ss_pred EEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999987653
No 285
>PLN02624 ornithine-delta-aminotransferase
Probab=99.66 E-value=1.2e-13 Score=145.25 Aligned_cols=284 Identities=15% Similarity=0.122 Sum_probs=169.9
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhC------C-C-cEEEecCCCchHH-HHHHHHcCC---
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVF------P-D-GILYASRESHYSV-FKAARMYRM--- 206 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~------p-~-~~Vl~s~~~H~S~-~~~~~~~G~--- 206 (476)
+...++.+.++++++.+ ..+|+++|++||-.|+..++... + + ..|+....+|... ..+..+.+-
T Consensus 117 ~~~~~la~~L~~~~~~~----~~~f~~SGseA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~ 192 (474)
T PLN02624 117 DKFPEFAEYLTSMFGYD----MVLPMNTGAEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEA 192 (474)
T ss_pred HHHHHHHHHHHhhcCCC----eEEEeCChHHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccc
Confidence 44556677777877764 28999999999999999988631 1 2 2444444333332 222222110
Q ss_pred ---------eEEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC----HHHHHHHHHHhCCCCCceEEE
Q 011842 207 ---------ECVKVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD----LDLVIQTLEESGFTQDRFYIH 273 (476)
Q Consensus 207 ---------~v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~----l~~I~~ia~~~g~~~~~~~lh 273 (476)
.+..+|.+ |++.|++.++....+..+|++....+++|.+.| +++|.++|++||+ +++
T Consensus 193 ~~~~~~~~~~~~~~~~~-----d~~~l~~~l~~~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gi-----llI 262 (474)
T PLN02624 193 TRGFGPLLPGHLKVDFG-----DLDALEKIFEEDGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNV-----LMI 262 (474)
T ss_pred cccCCCCCCCceEeCCC-----CHHHHHHHHHhCCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCC-----EEE
Confidence 13334433 789999999765455667888888899999877 9999999999999 999
Q ss_pred EecCcccccccccccCCCCCCc-ccccEEEEcCCCCCCCC-CCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhH
Q 011842 274 CDGALFGLMMPFVKKAPKVSFK-KPIGSVSVSGHKFVGCP-MPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAP 351 (476)
Q Consensus 274 vD~a~~g~~~~~~~~~~~~~~~-~~~Dsi~~s~hK~l~~p-~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~ 351 (476)
+|++|.|+.. ...... .+.. ...|+++++ |.++.+ +++|+++.+.+++..+.... + ..++.+.. ...
T Consensus 263 ~DEv~tG~Gr-tG~~~a-~~~~~i~pDiv~ls--K~lggG~~pigav~~~~~i~~~~~~~~-~----~~T~~g~p--l~~ 331 (474)
T PLN02624 263 ADEIQTGLAR-TGKMLA-CDWEEVRPDVVILG--KALGGGVIPVSAVLADKDVMLCIKPGE-H----GSTFGGNP--LAS 331 (474)
T ss_pred EeccccCcCc-Ccchhh-HHhcCCCCCEEEec--ccccCCCCcceeeeecHHHHhHhccCC-c----CCCCCCCH--HHH
Confidence 9999976322 111110 1111 126888764 887766 78999999887655443211 0 11222211 112
Q ss_pred HHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcC--Ce---EeecCCeeEEE--EecCC--c---HHHh-----hce
Q 011842 352 IFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAG--IS---AMLNELSSTVV--FERPQ--D---EEFV-----RRW 414 (476)
Q Consensus 352 l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g--~~---~~~~~~~~iv~--f~~~~--~---~~~~-----~~~ 414 (476)
....++++.+.. .+..++..++.++|++.|++.. +. ....+...++. |..+. . .++. +++
T Consensus 332 aaa~aaLe~l~~---~~l~~~~~~~~~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~l~~~~~~~~~a~~~~~~L~e~GV 408 (474)
T PLN02624 332 AVAMAALQVVQD---EKLAERSAKLGQELRDQLQKIQKQFPKLIKEVRGRGLLNAVVLNSPKLGPVSAYDVCLKLKERGL 408 (474)
T ss_pred HHHHHHHHHHHh---chHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEeeEEEEEEEecCCCcChHHHHHHHHHHHhCCe
Confidence 222233333322 2345566677777877776642 11 11112222333 32221 1 1222 223
Q ss_pred ee-cccCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 011842 415 QL-ACQGNIAHVVVMPNVTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 415 ~l-~~~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~ 450 (476)
.+ +...+.+|++++..+|+++|+.+++.|+++.+..
T Consensus 409 ~v~p~~~~~lR~~p~l~~t~e~id~~l~~L~~~l~~~ 445 (474)
T PLN02624 409 LAKPTHDTIIRLAPPLSISEDELQECSKALSDVLEHD 445 (474)
T ss_pred EEecCCCCEEEEECCccCCHHHHHHHHHHHHHHHHHH
Confidence 33 3345789999989999999999999998887554
No 286
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.66 E-value=8.9e-14 Score=144.46 Aligned_cols=293 Identities=11% Similarity=0.018 Sum_probs=170.8
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhh------CCCcEEEecCCCchHHH-HHHHHcCC-----
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREV------FPDGILYASRESHYSVF-KAARMYRM----- 206 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~------~p~~~Vl~s~~~H~S~~-~~~~~~G~----- 206 (476)
+.+.++.+.+.+++.-.. ...+|+++||+|+..|++.+|.. ..+..|+.-+.+|.... -+....+-
T Consensus 85 ~~~~~la~~l~~~~p~~~--~~v~f~~sGseA~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~ 162 (423)
T PRK05964 85 EPAERLAQRLVALTPGGL--DHVFFSDSGSVAVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHA 162 (423)
T ss_pred HHHHHHHHHHHHhCCCCC--CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccc
Confidence 556677788888764211 24899999999999999999864 12345555444443332 22221111
Q ss_pred -------eEEEEeCCCC--CccCHHHHHHHHHcCCCCcEEEEEee-CCCcccccc----CHHHHHHHHHHhCCCCCceEE
Q 011842 207 -------ECVKVDCLIS--GEIDCADFKAKLLQNKDKPAIINVNI-GTTVKGAVD----DLDLVIQTLEESGFTQDRFYI 272 (476)
Q Consensus 207 -------~v~~v~~~~~--g~~D~~~Le~~l~~~~~~p~~vv~t~-gtt~tG~id----~l~~I~~ia~~~g~~~~~~~l 272 (476)
.+..++...+ ...+++.|++.+.+..+....|++.. ..+..|.+- .+++|.++|++||+ ++
T Consensus 163 ~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~l~~~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~-----ll 237 (423)
T PRK05964 163 LYTPLLFEQVTAPFPPDGYEQATLDALEALLEKHAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGV-----LL 237 (423)
T ss_pred cccCcCCCCEEeCCCcchhHHHHHHHHHHHHHhCCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCC-----EE
Confidence 1233333211 12338889999976554455555543 244455443 39999999999999 99
Q ss_pred EEecCcccccccccccCCCCCCc-ccccEEEEcCCCCCCCC-CCceeEEeehhhhhhhcCC---ccccCCCCCcccCCCC
Q 011842 273 HCDGALFGLMMPFVKKAPKVSFK-KPIGSVSVSGHKFVGCP-MPCGVQITRMEHINVLSSN---VEYLASRDATIMGSRN 347 (476)
Q Consensus 273 hvD~a~~g~~~~~~~~~~~~~~~-~~~Dsi~~s~hK~l~~p-~~~G~l~~~~~~~~~l~~~---~~yl~~~~~~~~~sr~ 347 (476)
++|++|.|+.... .... .... -..|.++++ |+++.+ .++|+++.++++.+.+... ..++.+ .|+.+
T Consensus 238 I~DEv~tg~gr~G-~~~a-~~~~~v~pDi~~~~--K~l~gG~~p~~av~~~~~i~~~~~~~~~~~~~~~~--~T~~~--- 308 (423)
T PRK05964 238 IFDEIATGFGRTG-TLFA-CEQAGVSPDIMCLS--KGLTGGYLPLAATLCTAEIFEAFYSDDRAKAFMHS--PSYTA--- 308 (423)
T ss_pred EEechhhCCCcCc-chhH-HHhcCCCCCeeeee--hhhhcCcccceEEEEcHHHHHhhhcCCcccccccC--CCCCc---
Confidence 9999997642211 1100 0111 126877654 999877 6899999998877665321 111111 11111
Q ss_pred ChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcC-CeEee--cCCeeEEEEecCCc------HHH-----hhc
Q 011842 348 GHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAG-ISAML--NELSSTVVFERPQD------EEF-----VRR 413 (476)
Q Consensus 348 ~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g-~~~~~--~~~~~iv~f~~~~~------~~~-----~~~ 413 (476)
.++...+++..+..-.-+...++..++.++|++.|++.. ...+. .....++.+...++ ..+ .++
T Consensus 309 --np~~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~l~~l~~~~~i~~vrg~Gl~~~i~l~~~~~~~~~~~l~~~l~~~G 386 (423)
T PRK05964 309 --NPLACAAANASLDLFEDEPVLERVAALSAGLAEGLEPFRDLPGVADVRVLGAIGAVELDRPVLERDGPALRAFALERG 386 (423)
T ss_pred --CHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhhccCCCeEEeecccEEEEEEeccCcchhHHHHHHHHHHHCC
Confidence 233333333333111113466777888888988887752 21111 12234444443321 112 123
Q ss_pred eeecccCCEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Q 011842 414 WQLACQGNIAHVVVMPNVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 414 ~~l~~~~~~lRv~~~~~~T~edid~~~~~l~~~~~~ 449 (476)
+.+...++.+|++.+..+|++|||.++++|+++.++
T Consensus 387 v~v~~~~~~lR~~p~l~~t~edId~~v~~l~~al~~ 422 (423)
T PRK05964 387 VLLRPLGNTIYLMPPYIITAEELDRITDAIVEVADE 422 (423)
T ss_pred eEEEecCCEEEEeCCcccCHHHHHHHHHHHHHHHhh
Confidence 334444578999999999999999999999998765
No 287
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.66 E-value=1.2e-14 Score=148.05 Aligned_cols=225 Identities=14% Similarity=0.007 Sum_probs=147.5
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCC-
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCL- 214 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~- 214 (476)
...++|++ +++++|.+. ++.|++||.|+.+++.++. ..+|++|+++..++.+...++...|++++.++++
T Consensus 26 ~~~~fE~~----~a~~~g~~~----~~~~~sgt~Al~~al~~l~-~~~gdeVi~p~~t~~~~~~ai~~~G~~pv~~Di~~ 96 (363)
T PF01041_consen 26 YVEEFEKE----FAEYFGVKY----AVAVSSGTSALHLALRALG-LGPGDEVIVPAYTFPATASAILWAGAEPVFVDIDP 96 (363)
T ss_dssp HHHHHHHH----HHHHHTSSE----EEEESSHHHHHHHHHHHTT-GGTTSEEEEESSS-THHHHHHHHTT-EEEEE-BET
T ss_pred HHHHHHHH----HHHHhCCCe----EEEeCChhHHHHHHHHhcC-CCcCceEecCCCcchHHHHHHHHhccEEEEEeccC
Confidence 45566666 566677654 8999999999999988843 3489999999999999999999999999999998
Q ss_pred CCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCC
Q 011842 215 ISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSF 294 (476)
Q Consensus 215 ~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~ 294 (476)
+++.||++.|+++|+++++ .|++++- .|...|+++|.++|+++|+ +|+.|+||+.+..-..+.. +
T Consensus 97 ~~~~id~~~~~~~i~~~t~---ai~~~h~---~G~~~d~~~i~~~~~~~~i-----~lIeD~a~a~g~~~~g~~~----G 161 (363)
T PF01041_consen 97 ETLNIDPEALEKAITPKTK---AILVVHL---FGNPADMDAIRAIARKHGI-----PLIEDAAQAFGARYKGRPV----G 161 (363)
T ss_dssp TTSSB-HHHHHHHHHTTEE---EEEEE-G---GGB---HHHHHHHHHHTT------EEEEE-TTTTT-EETTEET----T
T ss_pred CcCCcCHHHHHHHhccCcc---EEEEecC---CCCcccHHHHHHHHHHcCC-----cEEEccccccCceeCCEec----c
Confidence 6799999999999998885 6666554 4888899999999999999 9999999985543222221 1
Q ss_pred cccccEEEEcC--CCCCCCCCCceeEEeehh-hhhhh---cCCc-------cccCCCCCcccCCCCChhHHHHHHHHHHh
Q 011842 295 KKPIGSVSVSG--HKFVGCPMPCGVQITRME-HINVL---SSNV-------EYLASRDATIMGSRNGHAPIFLWYTLNRK 361 (476)
Q Consensus 295 ~~~~Dsi~~s~--hK~l~~p~~~G~l~~~~~-~~~~l---~~~~-------~yl~~~~~~~~~sr~~~~~l~~~~~l~~~ 361 (476)
. .-|.-++|+ .|.+.++- .|+++++++ +.+.+ .... .|..... .|.......+. +++...
T Consensus 162 ~-~gd~~~fSf~~~K~i~~ge-GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~g~n~rm~~~~--AAigl~ 234 (363)
T PF01041_consen 162 S-FGDIAIFSFHPTKIITTGE-GGAVVTNDPELAERARALRNHGRSRDAFRRYRHELP---PGYNFRMSELQ--AAIGLA 234 (363)
T ss_dssp S-SSSEEEEESSTTSSS-SSS--EEEEESTHHHHHHHHHHTBTTEETSECSTTEESSS---S--B-B-BHHH--HHHHHH
T ss_pred C-CCCceEecCCCCCCCcCCC-CeeEEecHHHHHHHhhhhhccCcCcccccccccccc---CCcccccHHHH--HHHHHH
Confidence 1 136555555 59886544 588888875 33222 1110 1110000 11111112222 232222
Q ss_pred ChhcHHHHHHHHHHHHHHHHHHHHhcCCeE
Q 011842 362 GYKGFQKEVQKCLRNAHYLKDRLLDAGISA 391 (476)
Q Consensus 362 g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~ 391 (476)
..+.+++.+++.+++++++.+.|...+...
T Consensus 235 QL~~L~~~~~~R~~~a~~y~~~L~~~~~~~ 264 (363)
T PF01041_consen 235 QLKRLDEIIARRRENAQRYREALAGIPGIK 264 (363)
T ss_dssp HHHTHHHHHHHHHHHHHHHHHHHTTGTTEE
T ss_pred HHHHhhhhHHHHHHHHHHHHHHHhcCCCcc
Confidence 346788899999999999999999987653
No 288
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.66 E-value=1.9e-14 Score=146.62 Aligned_cols=261 Identities=17% Similarity=0.156 Sum_probs=172.0
Q ss_pred HHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCc----hHHHHHHHHcCCeEEEEeCCCCC
Q 011842 142 VGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESH----YSVFKAARMYRMECVKVDCLISG 217 (476)
Q Consensus 142 ~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H----~S~~~~~~~~G~~v~~v~~~~~g 217 (476)
+++.+.++++.|.+. .+.+++|+.|+.+++.+... |||+|+++...| ..+...+...|++++.++.++..
T Consensus 67 ~~lE~~la~leg~~~----av~~sSG~aAi~~al~all~--~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~fvd~~~~~ 140 (384)
T PRK06434 67 QAFEEKYAVLENAEH----ALSFSSGMGAITSAILSLIK--KGKRILSISDLYGQTFYFFNKVLKTLGIHVDYIDTDRLN 140 (384)
T ss_pred HHHHHHHHHHhCCCc----EEEeCCHHHHHHHHHHHHhC--CCCEEEEecCccchHHHHHHHHHHhcCcEEEEECCCChh
Confidence 344444778888764 78999999999999887754 899999977633 22336667789999999886322
Q ss_pred ccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCccc
Q 011842 218 EIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKP 297 (476)
Q Consensus 218 ~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~ 297 (476)
.++ +.+. ++.+|.+.+++++++.+.|+++|+++|+++++ +||++++..+.. +. + ...
T Consensus 141 ~~~-------l~~~--~tklv~~e~~snpt~~v~Di~~I~~la~~~~l-------vVD~t~~s~~~~--~p---l--~~g 197 (384)
T PRK06434 141 SLD-------FDPS--NYDLIYAESITNPTLKVPDIKNVSSFCHENDV-------IVDATFASPYNQ--NP---L--DLG 197 (384)
T ss_pred hee-------ecCC--CeeEEEEEcCCCCCceeecHHHHHHHHHHcCe-------EEECCCCCcccC--Cc---h--hcC
Confidence 222 2221 23488889999999999999999999999986 459998654321 11 1 134
Q ss_pred ccEEEEcCCCCCCCCCC--ceeEEeehh-hhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHH
Q 011842 298 IGSVSVSGHKFVGCPMP--CGVQITRME-HINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCL 374 (476)
Q Consensus 298 ~Dsi~~s~hK~l~~p~~--~G~l~~~~~-~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~ 374 (476)
+|+++.|.||+++++.. .|+++++++ +.+.+...... .|.. ..++..|.. ..|.+.+..++++..
T Consensus 198 aDivv~S~tK~i~G~~d~~gG~vv~~~~~~~~~~~~~~~~--------~G~~--~~~~~A~l~--~~gL~tL~~R~~r~~ 265 (384)
T PRK06434 198 ADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVERRKT--------LGSN--PDPIQAYLA--LRGLKTLGLRMEKHN 265 (384)
T ss_pred CCEEEeecccccCCCCCceEEEEecCcHHHHHHHHHHHHh--------cCCC--CCHHHHHHH--HhCCCcHHHHHHHHH
Confidence 89999999999997665 677777654 32322110001 1111 123444443 445688999999999
Q ss_pred HHHHHHHHHHHhcCCe-EeecCC-----------eeEEEEecCCc---HHHhhceeecc---------------------
Q 011842 375 RNAHYLKDRLLDAGIS-AMLNEL-----------SSTVVFERPQD---EEFVRRWQLAC--------------------- 418 (476)
Q Consensus 375 ~~a~~l~~~L~~~g~~-~~~~~~-----------~~iv~f~~~~~---~~~~~~~~l~~--------------------- 418 (476)
+++..+.+.|++.+.. .+..|. ..+++|...+. ..|.+.+.+..
T Consensus 266 ~~a~~~a~~L~~~p~v~~V~yPgl~~~~~~~~g~g~~~sf~l~~~~~~~~f~~~l~l~~~~~slG~~~sl~~~p~~~~h~ 345 (384)
T PRK06434 266 KNGMELARFLRDSKKISNVYYPDTEIGKKVLRGFGGMLSFELRSMEDVHKFIRNLEIPMVAASLGGVESLITLPVETSHS 345 (384)
T ss_pred HHHHHHHHHHHcCCCccEEECCChHHHHHhcCCCCceEEEEECCHHHHHHHHHhCCcceEccCCCCCCeeeECCCccccc
Confidence 9999999999998743 232222 46788887532 23333333210
Q ss_pred ------------cCCEEEEEEcCCCCHHHHHHHHHHHHHHH
Q 011842 419 ------------QGNIAHVVVMPNVTIDKLDDFLNELIENR 447 (476)
Q Consensus 419 ------------~~~~lRv~~~~~~T~edid~~~~~l~~~~ 447 (476)
..+.+|+++. -||++.++++|+++.
T Consensus 346 ~~~~e~~~~~gi~~~liRlsvG----lEd~~dLi~dl~~Al 382 (384)
T PRK06434 346 SLSPEERERLGISDNLVRFSIG----IEDIDDLIKDIENAL 382 (384)
T ss_pred cCCHHHHHhcCCCcCeEEEEeC----cCCHHHHHHHHHHHh
Confidence 0246788876 467777777777765
No 289
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.66 E-value=4.9e-14 Score=134.11 Aligned_cols=291 Identities=12% Similarity=0.070 Sum_probs=205.5
Q ss_pred HHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCc-----hHHHHHHHHcCCeEEEEe
Q 011842 138 RQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESH-----YSVFKAARMYRMECVKVD 212 (476)
Q Consensus 138 ~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H-----~S~~~~~~~~G~~v~~v~ 212 (476)
..+-+.+.+.++.++|...++ .+++.+.|.-++-.+.++....++..||+++-.- |.....++++|..
T Consensus 75 ~~lp~~lgdklApLiGA~~~E--vvv~dtts~nl~k~L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~----- 147 (407)
T COG3844 75 FDLPERLGDKLAPLIGARAGE--VVVTDTTSINLFKVLAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADLLGIG----- 147 (407)
T ss_pred hhchhHHHHHhhhhhcCCCCc--eEEeCCcchHHHHHHHHHhccCCCceEEeecCCCCCcchhhhcchhhhhccc-----
Confidence 467778889999999998654 6666544444444555565555677777776543 3344566666654
Q ss_pred CCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCC
Q 011842 213 CLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKV 292 (476)
Q Consensus 213 ~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~ 292 (476)
.+-.+.+.++++++++++++. +|.+++....||..-++.+|..++++||+ ++.-|=||+.+..| +
T Consensus 148 ~~~~~~~~P~~~~~~~~dd~A---vV~L~~V~y~TGql~dm~aiT~~AH~~ga-----lv~wDLAHsaGavp-------~ 212 (407)
T COG3844 148 YDLEGVIAPRALEEAITDDVA---VVLLSHVNYKTGQLLDMRAITALAHQHGA-----LVGWDLAHSAGAVP-------V 212 (407)
T ss_pred ccceeeeChHHHHHhhccceE---EEEeccccccccceeeHHHHHHHHHhcCc-----eEEeehhcccCCcc-------e
Confidence 223456688899999988764 88899999999999999999999999999 99999999998887 3
Q ss_pred CCcc-cccEEEEcCCCCCC-CCCCceeEEeehhhhhhh-cCCccccCCCC---------------CcccCCCCChhHHHH
Q 011842 293 SFKK-PIGSVSVSGHKFVG-CPMPCGVQITRMEHINVL-SSNVEYLASRD---------------ATIMGSRNGHAPIFL 354 (476)
Q Consensus 293 ~~~~-~~Dsi~~s~hK~l~-~p~~~G~l~~~~~~~~~l-~~~~~yl~~~~---------------~~~~~sr~~~~~l~~ 354 (476)
+... ++|+-++++||+|. +|...+++++.+++.+.. ....-+....+ .-.+++.+......+
T Consensus 213 ~Lh~~gaDfaigcsyKYLNgGPGapa~l~v~~~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal 292 (407)
T COG3844 213 DLHAAGADFAIGCSYKYLNGGPGAPAGLFVAPRHRERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAAL 292 (407)
T ss_pred eecccCCCeeeeeeceeccCCCCCceeEEeccccccccccccccccCCCCcchhhhccCcCccccceeeCCcchhhhHHH
Confidence 4333 49999999999995 466678888887754322 11112222111 112344444444456
Q ss_pred HHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhc----CCeEeecCC----eeEEEEecCCcHHHhhcee---e---cccC
Q 011842 355 WYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDA----GISAMLNEL----SSTVVFERPQDEEFVRRWQ---L---ACQG 420 (476)
Q Consensus 355 ~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----g~~~~~~~~----~~iv~f~~~~~~~~~~~~~---l---~~~~ 420 (476)
..+|..+...++.+..++...+++||.+.++.. ++.+..|.. ..-|+|..|.....++.+. + ....
T Consensus 293 ~~aLDifa~~~i~~lR~kSlaLTd~fieLvEa~~~~~~l~l~tPr~~~~rGsqvS~~hp~~~~V~qaLi~rGVigD~R~P 372 (407)
T COG3844 293 EGALDIFADVDITELRKKSLALTDYFIELVEARCEYYGLTLVTPRAHEERGSQVSLYHPHGYQVMQALIDRGVIGDFREP 372 (407)
T ss_pred hhhhhhhhhcCHHHHHHhhhHHHHHHHHHHHhccccCCcEEeccchhhhccceeeEecCcHHHHHHHHHHcCccccccCC
Confidence 677777777889999999999999999999874 333333321 3678888887655544332 1 2345
Q ss_pred CEEEEEEcCC-CCHHHHHHHHHHHHHHHHHH
Q 011842 421 NIAHVVVMPN-VTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 421 ~~lRv~~~~~-~T~edid~~~~~l~~~~~~~ 450 (476)
+.+|+.++|. ++.+||=..+++|+++.++.
T Consensus 373 ~vlRfgftPlY~~~~DVw~AV~~L~evL~t~ 403 (407)
T COG3844 373 DVLRFGFTPLYVSFVDVWDAVDALEEVLDTL 403 (407)
T ss_pred CeeeecCccceechhHHHHHHHHHHHHHHhh
Confidence 8999988765 58999999999999998764
No 290
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=99.65 E-value=1.8e-13 Score=138.75 Aligned_cols=336 Identities=15% Similarity=0.151 Sum_probs=179.3
Q ss_pred CcHHHHHHHHHHHHhcccc--cccCCCCcCCcchHHHHH-HHHH--hhCCCCCCcccCccchhhHHHHHHHHHHHHHHcC
Q 011842 79 AYMAGVLARYRKTLMERTK--HHLGYPYNLDFDYGALAQ-LQHF--SINNLGDPFIESNYGVHSRQFEVGVLDWFARLWE 153 (476)
Q Consensus 79 ~~~~~il~~~~~~~~~~~~--~~~g~p~~~~~~~~~l~~-~l~~--~~n~~g~~~~~~~~~~~~~~le~~~~~~la~l~g 153 (476)
.+-.+++..+.+....+.. .++|--.+.-+.++.+.. ++.. .+... .++. .....+.-+..-+...++++|.|
T Consensus 47 ~sE~e~~r~~~~la~kN~~~~~fiG~G~y~~~~P~~i~~~i~~~~ef~TaY-tPYQ-pEisQG~Lq~lfe~Qs~i~eLTG 124 (429)
T PF02347_consen 47 LSEYELLRHLERLASKNKSYTSFIGAGSYTHYVPAVIDRNILSRPEFYTAY-TPYQ-PEISQGRLQALFEYQSMICELTG 124 (429)
T ss_dssp --HHHHHHHHHHHHTTS--TTS---CTTT-----HHHHH-HHCCHHCCCS--STTS-GGGBHHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHhcCCCCCccccccccCceeChhhcCccccChhhhccC-CCCC-cHHHHHHHHHHHHHHHHHHHhhC
Confidence 4456888888887655432 233322222233455555 3321 11110 1111 11233556677788899999999
Q ss_pred CCCCcccEEEcCCchhHHHHHHHHH-Hhh-CCCcEEEecCCCchHHHHHHHH----cCCeEEEEeCCCCCccCHHHHHHH
Q 011842 154 LENNEYWGYITNCGTEGNLHGILVG-REV-FPDGILYASRESHYSVFKAARM----YRMECVKVDCLISGEIDCADFKAK 227 (476)
Q Consensus 154 ~~~~~~~g~~t~ggt~An~~al~aa-~~~-~p~~~Vl~s~~~H~S~~~~~~~----~G~~v~~v~~~~~g~~D~~~Le~~ 227 (476)
++..+ .-.-.++| |.-.|++++ |.. ..+..|++++..|+.....++. .|++++.++.++++..|
T Consensus 125 mdvaN--aSlyd~at-A~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~~~~~~~~~d------- 194 (429)
T PF02347_consen 125 MDVAN--ASLYDGAT-AAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVLRTYAAPLGIEIVEVPLDEDGTTD------- 194 (429)
T ss_dssp SSEE---SEBSSCCH-HHHHHHHHHHHHHTT---EEEEETTS-CHHHHHHHHHCCHCCEEEEEE-BBTTCSB--------
T ss_pred CCccC--CCCCChhH-HHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHHHHhhhhCCeEEEEecccccCCcc-------
Confidence 98421 12233443 333333333 222 2346999999999988765443 58899999998777777
Q ss_pred HHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCcccccEEEEcCCC
Q 011842 228 LLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKPIGSVSVSGHK 307 (476)
Q Consensus 228 l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~~Dsi~~s~hK 307 (476)
......|+++.|+ ..|.++++++|+++++++|. ++++ ++---... ..+ -.+.-++|++ +..||
T Consensus 195 ----~~~~a~v~vq~Pn-~~G~~ed~~~i~~~~h~~ga-----l~~~-~ad~~aL~-~l~----~Pge~GADI~-vg~~Q 257 (429)
T PF02347_consen 195 ----DDDTAAVMVQNPN-TFGVFEDIKEIADIAHAAGA-----LVIV-GADPNALG-GLK----SPGEYGADIV-VGEHQ 257 (429)
T ss_dssp ----STTEEEEEEESS--TTSB--THHHHHHHHHHTT------EEEE-CGGCCGCC-TC------GGGGT-SEE-EECCT
T ss_pred ----ccCeEEEEeecCC-CCceEeeHHHHHHHHHHcCC-----EEEE-ecCHHHHh-CcC----ChhhcCccEE-eeCCC
Confidence 2234578887775 66999999999999999999 8877 66321111 011 1122248999 55588
Q ss_pred CCCCC-----CCceeEEeehhhhhhhcCC-----------ccc----------cCCC-CCcccCCCCChhHHHHHHHHHH
Q 011842 308 FVGCP-----MPCGVQITRMEHINVLSSN-----------VEY----------LASR-DATIMGSRNGHAPIFLWYTLNR 360 (476)
Q Consensus 308 ~l~~p-----~~~G~l~~~~~~~~~l~~~-----------~~y----------l~~~-~~~~~~sr~~~~~l~~~~~l~~ 360 (476)
.++.| ++.|++.+++++.+.++.. ..| +... ..+-.||..+..++..+..+.+
T Consensus 258 ~fg~p~~~GGP~~G~~a~~~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAtSNIctnqaL~A~~a~~Yl~~ 337 (429)
T PF02347_consen 258 TFGIPMGFGGPGAGFFAVREDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKATSNICTNQALLALAAAIYLAY 337 (429)
T ss_dssp TTT---CCC-S--EEEEE-GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCSTT---SS-HHHHHHHHHHHHH
T ss_pred CCcccCCCCCCCeeeEEEhhhhhhhCCCceecccccccccceeeeccccccccccccchhhhhhhhHHHHHHHHHHHHHH
Confidence 77766 4578899999887665321 011 1000 1122345444455667788899
Q ss_pred hChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCe-eEEEEecCCc--HHHhh-----ceeec-ccCCEEEEEEcCCC
Q 011842 361 KGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNELS-STVVFERPQD--EEFVR-----RWQLA-CQGNIAHVVVMPNV 431 (476)
Q Consensus 361 ~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~-~iv~f~~~~~--~~~~~-----~~~l~-~~~~~lRv~~~~~~ 431 (476)
+|.+|++++.++...+++|+.++|++.....+..+.. ..+....+.. .++.+ ++.+. ...+.+.+++...+
T Consensus 338 ~G~~GL~~iA~~~~~~A~yl~~~L~~~~~~~~~~~~f~e~v~~~~~~~~~~~l~~~~~~~gl~~~~~~~~~~li~~TE~~ 417 (429)
T PF02347_consen 338 LGPEGLREIAERIHLNAHYLAERLKKIYGLPFDNPFFFEFVVVFSKDKEVEELLKRGIEGGLNLRYPDDGALLICVTETR 417 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCTTBECSSSSSBSSEEEEESS-HHHHHHHHTT----EEEGGG-SSEEEEE--TT-
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCceeeeeecCCcHHHHHHHHHHHhcCCCccccCCCeEEEEccCCC
Confidence 9999999999999999999999999873222323322 2333222221 11222 22221 12348889999999
Q ss_pred CHHHHHHHHHHH
Q 011842 432 TIDKLDDFLNEL 443 (476)
Q Consensus 432 T~edid~~~~~l 443 (476)
|+||||+|+++|
T Consensus 418 t~edid~lv~~f 429 (429)
T PF02347_consen 418 TKEDIDRLVEAF 429 (429)
T ss_dssp -HHHHHHHHH--
T ss_pred CHHHHHHHHhcC
Confidence 999999999875
No 291
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.65 E-value=1.6e-13 Score=140.04 Aligned_cols=290 Identities=12% Similarity=0.131 Sum_probs=177.3
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHH-HHHcCCeEEEEeC-
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKA-ARMYRMECVKVDC- 213 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~-~~~~G~~v~~v~~- 213 (476)
...+||++ +++++|.+. .+.|++||.|+.++..+. ..||++| +..+|+.-..+ +...|+..+-+..
T Consensus 79 s~~~LE~~----vAe~lG~e~----aV~v~sGTaAl~ll~~l~--v~pGd~V--p~n~~f~Tt~ahI~~~Ga~fvDi~~d 146 (460)
T PRK13237 79 NFYHLEET----VQEYYGFKH----VVPTHQGRGAENLLSRIA--IKPGQYV--PGNMYFTTTRYHQELNGGIFVDIIID 146 (460)
T ss_pred cHHHHHHH----HHHHHCCCe----EEEeCCHHHHHHHHHHhC--CCCcCEE--CCccchHhhHHHHHhCCcEEEeeecc
Confidence 45677776 556678875 899999999998754433 3488865 66677666555 6777875544431
Q ss_pred ---------CCCCccCHHHHHHHHHcCCC-CcEEEEEeeCCCcc-cc---ccCHHHHHHHHHHhCCCCCceEEEEecCcc
Q 011842 214 ---------LISGEIDCADFKAKLLQNKD-KPAIINVNIGTTVK-GA---VDDLDLVIQTLEESGFTQDRFYIHCDGALF 279 (476)
Q Consensus 214 ---------~~~g~~D~~~Le~~l~~~~~-~p~~vv~t~gtt~t-G~---id~l~~I~~ia~~~g~~~~~~~lhvD~a~~ 279 (476)
..+|.||++.|+++|++.+. +..+|.+....+.. |. ..++++|.++|++||+ .+|.|+|+.
T Consensus 147 ~a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl-----~Vi~DaAra 221 (460)
T PRK13237 147 EAHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGI-----KVFFDATRC 221 (460)
T ss_pred cccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCC-----EEEEECcch
Confidence 23689999999999986532 22244444455555 33 3579999999999999 999999986
Q ss_pred cc---cc----cccccCCCC----CCcccccEEEEcCCCCCCCCCCceeEEeehh-hhhhhcCC-ccccCCCCCcccCCC
Q 011842 280 GL---MM----PFVKKAPKV----SFKKPIGSVSVSGHKFVGCPMPCGVQITRME-HINVLSSN-VEYLASRDATIMGSR 346 (476)
Q Consensus 280 g~---~~----~~~~~~~~~----~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~-~~~~l~~~-~~yl~~~~~~~~~sr 346 (476)
.+ ++ +.....+.. .....+|.+++|+||.+.+|. .|+++++++ +.+.+... ..|-.- .+ .+..
T Consensus 222 ~gna~fI~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~~~-GG~i~t~D~eL~~~~r~~~~~~eG~--~t-ygg~ 297 (460)
T PRK13237 222 VENAYFIKEREEGYQDKSIKEIVHEMFSYADGCTMSGKKDCLVNI-GGFLAMNDEELFDEAKELVVVYEGM--PS-YGGM 297 (460)
T ss_pred hcChhhhcccccccCCCcHhHHhhhccCcCcEEEEeCCCCCCCCC-ceEEEECCHHHHHHHHHhccccCCC--cC-CCCh
Confidence 43 11 111111100 111248999999999999866 577888876 44433211 122100 01 1111
Q ss_pred CChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEe-------cCCc----HHHhhcee
Q 011842 347 NGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFE-------RPQD----EEFVRRWQ 415 (476)
Q Consensus 347 ~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~-------~~~~----~~~~~~~~ 415 (476)
++....++...+... --.+.+++....++||.+.|.+.|+.++.|....-|.+. +|.. ..+...+.
T Consensus 298 ~grd~~alAvgl~E~---~~~~y~~~ri~~~~~l~~~L~~~Gvpv~~p~ggH~v~vda~~~lph~~~~~~p~~al~~~ly 374 (460)
T PRK13237 298 AGRDMEAMAIGIEES---VQYEYIEHRVGQVRYLGEKLLAAGVPIVEPVGGHAVFLDARRFLPHLPQDQFPAQALAAELY 374 (460)
T ss_pred hhhHHHHHHhHHHhh---chHHHHHHHHHHHHHHHHHHHHCCCceecCCCceEEEEEhHHhCCCCCcccChHHHHHHHHH
Confidence 111122222223221 113677788889999999999999987766655555443 1111 11111111
Q ss_pred ------------e-----ccc-------CCEEEEEEcCC-CCHHHHHHHHHHHHHHHHH
Q 011842 416 ------------L-----ACQ-------GNIAHVVVMPN-VTIDKLDDFLNELIENRST 449 (476)
Q Consensus 416 ------------l-----~~~-------~~~lRv~~~~~-~T~edid~~~~~l~~~~~~ 449 (476)
+ +.. -..+|+.+... .|.+++|.+++.|..+.+.
T Consensus 375 ~~~GiR~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~ 433 (460)
T PRK13237 375 IESGVRSMERGIVSAGRDPKTGENHYPKLELVRLTIPRRVYTYAHMDVVADSVIKLYKH 433 (460)
T ss_pred HHhCcCeEeecceecccCCCCCccCCCccceeeeccccccccHHHHHHHHHHHHHHHHh
Confidence 0 111 24678876544 4999999999999888654
No 292
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.64 E-value=3.7e-13 Score=137.68 Aligned_cols=281 Identities=14% Similarity=0.138 Sum_probs=164.6
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEe-cCCCchHHHHHHHHcCCeEEE------E
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYA-SRESHYSVFKAARMYRMECVK------V 211 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~-s~~~H~S~~~~~~~~G~~v~~------v 211 (476)
+++.++.+++.. .+ + ...+|+++||+||..|+..++...++..|++ +...|.+...++...|.+... +
T Consensus 70 ~~~~~la~~l~~---~~-~-~~~~~~~SGseA~~~Al~~ar~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~ 144 (375)
T PRK04260 70 SLQEEVAQKLIG---DK-D-YLAFFCNSGAEANEAAIKIARKATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGV 144 (375)
T ss_pred HHHHHHHHHHhc---Cc-C-CEEEEcCccHHHHHHHHHHHHHhcCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCC
Confidence 555565554432 11 1 2368999999999999999986545555554 556687766665554432110 0
Q ss_pred eCCCCC-ccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC----HHHHHHHHHHhCCCCCceEEEEecCccccccccc
Q 011842 212 DCLISG-EIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD----LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFV 286 (476)
Q Consensus 212 ~~~~~g-~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~----l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~ 286 (476)
+..... ..|+++|++.+.++ ..+|++....+++|.+.+ +++|.++|+++|+ ++++|++|.++. ...
T Consensus 145 ~~~~~~~~~dl~~l~~~l~~~---~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~-----~~i~De~~~g~g-~~g 215 (375)
T PRK04260 145 PHFSYAIFNDLNSVKALVNKN---TAAVMLELVQGESGVLPADKDFVKALADYCQETGI-----LLIVDEVQTGMG-RTG 215 (375)
T ss_pred CCeEEeCCCCHHHHHHhcCCC---eEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCC-----EEEEechhhCCC-ccc
Confidence 000000 23899999988543 346777767778888755 8999999999999 999999997542 221
Q ss_pred ccCCCCCC-cccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhc
Q 011842 287 KKAPKVSF-KKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKG 365 (476)
Q Consensus 287 ~~~~~~~~-~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g 365 (476)
.... ... ....|.+ ++.|.++.++++|++++++++.+.+... .+ ..++.++ ++.+.++++.+..-.
T Consensus 216 ~~~~-~~~~~~~pdi~--t~sK~l~~G~~ig~~~~~~~~~~~~~~~-~~----~~t~~~~-----~~~~~aa~a~l~~~~ 282 (375)
T PRK04260 216 KLYA-FEHYGIEPDIF--TLAKGLANGVPVGAMLAKSSLGGAFGYG-SH----GSTFGGN-----KLSMAAASATLDIML 282 (375)
T ss_pred chhh-hHhhCCCCCEE--EecccccCCcceEEEEEcHHHHhhcCCC-CC----CCCCCcC-----HHHHHHHHHHHHHHH
Confidence 1110 111 1125655 5679998778999999998876655321 11 1122222 233333333331111
Q ss_pred HHHHHHHHHHHHHHHHHHHHh----cCCeEeecCCeeEEEEecC-CcHHHh-----hceeec-ccCCEEEEEEcCCCCHH
Q 011842 366 FQKEVQKCLRNAHYLKDRLLD----AGISAMLNELSSTVVFERP-QDEEFV-----RRWQLA-CQGNIAHVVVMPNVTID 434 (476)
Q Consensus 366 ~~~~~~~~~~~a~~l~~~L~~----~g~~~~~~~~~~iv~f~~~-~~~~~~-----~~~~l~-~~~~~lRv~~~~~~T~e 434 (476)
..+.+++.+++.+++++.|.+ .+.....+.....+.+... ....+. +++.+. ...+.+|++++..+|.+
T Consensus 283 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~~lR~~~~~~~t~~ 362 (375)
T PRK04260 283 TAGFLEQALENGNYLQEQLQKALQDKETVTTVRGLGYMIGIETTADLSQLVEAARDKGLIVLTAGTNVIRLLPPLTLTKE 362 (375)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEeccceEEEEEecCcHHHHHHHHHhCCCEEecCCCCEEEEcCCCccCHH
Confidence 234445555555555555544 3322222223344444432 222332 344443 33478999999999999
Q ss_pred HHHHHHHHHHHH
Q 011842 435 KLDDFLNELIEN 446 (476)
Q Consensus 435 did~~~~~l~~~ 446 (476)
||+++++.|+++
T Consensus 363 ~i~~~l~~l~~~ 374 (375)
T PRK04260 363 EIEQGIAILSEV 374 (375)
T ss_pred HHHHHHHHHHHh
Confidence 999999999765
No 293
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.63 E-value=5.4e-14 Score=145.85 Aligned_cols=171 Identities=15% Similarity=0.152 Sum_probs=127.0
Q ss_pred HHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCch------HHHHHHHHcCCeEEEEeC
Q 011842 140 FEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHY------SVFKAARMYRMECVKVDC 213 (476)
Q Consensus 140 le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~------S~~~~~~~~G~~v~~v~~ 213 (476)
....+.+.+++++|.+. .+++++|+.|++.++.+ . .++++|++++..|. ++...++..|++++.+++
T Consensus 123 r~~~le~~lA~l~gae~----alvv~sg~aAi~l~l~~-l--~~GdeVIvs~~e~v~~ggs~~i~~~~~~~G~~~~~v~~ 195 (454)
T TIGR00474 123 RYSHVEGLLCELTGAED----ALVVNNNAAAVLLALNT-L--AKGKEVIVSRGELVEIGGSFRIPDVMEQSGAKLVEVGT 195 (454)
T ss_pred HHHHHHHHHHHHhCCCc----EEEECCHHHHHHHHHHH-h--CCcCEEEECCChhhhhcchhhHHHHHHHcCCEEEEeCC
Confidence 35667888999999874 67788999998887744 3 38999999988763 344566778999999976
Q ss_pred CCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCc--cc--cccCHHHHHHHHHHhCCCCCceEEEEecCccccccccc---
Q 011842 214 LISGEIDCADFKAKLLQNKDKPAIINVNIGTTV--KG--AVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFV--- 286 (476)
Q Consensus 214 ~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~--tG--~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~--- 286 (476)
+ +..|+++++++|.++|+ +|++.+.+++ .| .+.|+++|+++|++||+ ++++|.+.|. +.+..
T Consensus 196 ~--~~~~l~dle~aI~~~T~---lv~~~h~sN~~~~G~~~~~dl~~I~~la~~~g~-----~vivD~~sG~-l~~~~~~g 264 (454)
T TIGR00474 196 T--NRTHLKDYEDAITENTA---LLLKVHTSNYRIVGFTEEVSIAELVALGREHGL-----PVMEDLGSGS-LVDLSRYG 264 (454)
T ss_pred C--CCCCHHHHHHhcCcCCE---EEEEEccCcccccCCCCCCCHHHHHHHHHHcCC-----eEEEECCCcc-cccchhcc
Confidence 4 34589999999988775 6666677665 46 47899999999999999 9999986432 21211
Q ss_pred -ccCCC-CCCc-ccccEEEEcCCCCCCCCCCceeEEeehhhhhhhc
Q 011842 287 -KKAPK-VSFK-KPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLS 329 (476)
Q Consensus 287 -~~~~~-~~~~-~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~ 329 (476)
.+.+. .+.. .++|++++|+|||+++|. .|++++++++++.+.
T Consensus 265 l~~~p~~~~~~~~GaDiv~fSg~K~LgGp~-~G~i~g~~~~i~~l~ 309 (454)
T TIGR00474 265 LPDEPTVQEVIAAGVDLVTFSGDKLLGGPQ-AGIIVGKKELIERLK 309 (454)
T ss_pred CCCCcccccHhHcCCCEEEecCccccCCCe-EEEEEECHHHHHhhh
Confidence 11111 1222 349999999999999774 899999988776553
No 294
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.62 E-value=2.4e-13 Score=134.91 Aligned_cols=284 Identities=15% Similarity=0.110 Sum_probs=178.3
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCC---CcEEEecCC-CchHHHHHH---------HHcC
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFP---DGILYASRE-SHYSVFKAA---------RMYR 205 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p---~~~Vl~s~~-~H~S~~~~~---------~~~G 205 (476)
+...++.+++.++.+ ..+ ..+|+++|+|||=.|+..||.+.. +..|+.-.. -|.--.-+. +-.+
T Consensus 84 ~~~~~la~~L~~~s~-~~d--~vff~NSGaEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~ 160 (404)
T COG4992 84 EPQAELAEKLVELSP-FAD--RVFFCNSGAEANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFG 160 (404)
T ss_pred hHHHHHHHHHHhhCc-ccc--EEEEcCCcHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCC
Confidence 555677888888886 222 399999999999999999998743 334544443 342111110 0011
Q ss_pred ---CeEEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC----HHHHHHHHHHhCCCCCceEEEEecCc
Q 011842 206 ---MECVKVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD----LDLVIQTLEESGFTQDRFYIHCDGAL 278 (476)
Q Consensus 206 ---~~v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~----l~~I~~ia~~~g~~~~~~~lhvD~a~ 278 (476)
-.++.+|.+ |+++|+++|++++. .|++.--...-|.+.+ ++++.++|++||+ +++.|++|
T Consensus 161 Pl~~g~~~vpfn-----Di~al~~ai~~~ta---AvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~-----LLI~DEVQ 227 (404)
T COG4992 161 PLLPGFRHVPFN-----DIEALEAAIDEDTA---AVIVEPIQGEGGVIPAPPEFLKALRELCDEHGA-----LLILDEVQ 227 (404)
T ss_pred CCCCCceecCCC-----CHHHHHHHhccCeE---EEEEecccCCCCCCCCCHHHHHHHHHHHHHhCe-----EEEEeccc
Confidence 135667766 99999999998764 6777655666677644 8999999999999 99999999
Q ss_pred ccccccccccCCCCCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHH
Q 011842 279 FGLMMPFVKKAPKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTL 358 (476)
Q Consensus 279 ~g~~~~~~~~~~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l 358 (476)
.|.--.+.--...+.+. ..|+++.. |.|+++.++|.++++....+.+.. ..-+|.-+..+++..++.
T Consensus 228 tG~GRTGk~fA~e~~gV-~PDI~tla--K~LgGG~PigA~la~~~~~~~~~~----------G~HgSTfGGNpLacAv~~ 294 (404)
T COG4992 228 TGLGRTGKLFAYEHYGV-EPDILTLA--KALGGGFPIGAMLATEEIASAFTP----------GDHGSTFGGNPLACAVAL 294 (404)
T ss_pred cCCCccchHHHHHHhCC-CCCEEEee--ccccCCccceeeEEchhhhhcCCC----------CcccCCCCcCHHHHHHHH
Confidence 76422110000001111 16888866 999999999999998544333211 112233333456555555
Q ss_pred HHhChhcHHHHHHHHHHHHHHHHHHHHhcC--CeE---eecCCeeE-EEEecC-CcHHHh-----hcee-ecccCCEEEE
Q 011842 359 NRKGYKGFQKEVQKCLRNAHYLKDRLLDAG--ISA---MLNELSST-VVFERP-QDEEFV-----RRWQ-LACQGNIAHV 425 (476)
Q Consensus 359 ~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g--~~~---~~~~~~~i-v~f~~~-~~~~~~-----~~~~-l~~~~~~lRv 425 (476)
+.+..-.-+...++..+..++|.++|+++. +.. +...+..+ +-|..+ ....+. +++. +....+.+|+
T Consensus 295 a~l~~l~~e~ll~~v~~~g~~~~~~L~~l~~~~~~v~~vRG~GLmiGiel~~~~~a~~~~~~~~~~gvL~~~a~~~ViR~ 374 (404)
T COG4992 295 AVLEVLLEEGLLENVREKGEYLLQRLRELKRRYPLVKEVRGRGLMIGIELKEPYRARDIVRALREEGVLVLPAGPNVIRF 374 (404)
T ss_pred HHHHHHcchhHHHHHHHHHHHHHHHHHHHhhcCCceeeeecceeEEEEEecCcccHHHHHHHHHHCCeEEecCCCCeEEe
Confidence 444333335566777788888988888852 111 11222211 222222 122222 2333 3556789999
Q ss_pred EEcCCCCHHHHHHHHHHHHHHHHHHH
Q 011842 426 VVMPNVTIDKLDDFLNELIENRSTWY 451 (476)
Q Consensus 426 ~~~~~~T~edid~~~~~l~~~~~~~~ 451 (476)
.....+|+|+||..+++|+++.+.+.
T Consensus 375 ~PpL~i~~eei~~~~~~l~~~l~~~~ 400 (404)
T COG4992 375 LPPLVITEEEIDEALDALERALAAAS 400 (404)
T ss_pred cCCccCCHHHHHHHHHHHHHHHHHhh
Confidence 98888999999999999999887654
No 295
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.61 E-value=1.1e-12 Score=136.60 Aligned_cols=292 Identities=13% Similarity=0.077 Sum_probs=172.5
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCc-EEEecCCCchHHHHHHHHcCC-----------
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDG-ILYASRESHYSVFKAARMYRM----------- 206 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~-~Vl~s~~~H~S~~~~~~~~G~----------- 206 (476)
+.+.++.+.+++++.-.. ...+|+++|++||..|+.++|....+. +|.....-|.+...+..+.+-
T Consensus 86 ~~~~~la~~L~~~~~~~~--~~v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~ 163 (433)
T PRK08117 86 ESILKLAEELAEITPGGL--DCFFFSNSGAEAIEGALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPL 163 (433)
T ss_pred HHHHHHHHHHHHhCCCCC--CEEEEeCcHHHHHHHHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCC
Confidence 556677788888773211 248899999999999999998653333 444555556554443322211
Q ss_pred --eEEEEeCCCCCc------------cCHHHHHHHHHc--CCCCcEEEEEeeCCCccccccC----HHHHHHHHHHhCCC
Q 011842 207 --ECVKVDCLISGE------------IDCADFKAKLLQ--NKDKPAIINVNIGTTVKGAVDD----LDLVIQTLEESGFT 266 (476)
Q Consensus 207 --~v~~v~~~~~g~------------~D~~~Le~~l~~--~~~~p~~vv~t~gtt~tG~id~----l~~I~~ia~~~g~~ 266 (476)
.+..+|...... -|+++|++.+++ ....+..|++....++.|.+.| +++|.++|++||+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~- 242 (433)
T PRK08117 164 LGSVYQAPYPYCDRCPKGEDPEVCFLECLRDLESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGI- 242 (433)
T ss_pred CCCcEEeCCCccccccccCchhHHHHHHHHHHHHHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCC-
Confidence 123343321111 266778888764 2334566777656778888888 9999999999999
Q ss_pred CCceEEEEecCcccccccccccCCCCCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCC
Q 011842 267 QDRFYIHCDGALFGLMMPFVKKAPKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSR 346 (476)
Q Consensus 267 ~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr 346 (476)
++++|++|.|+.. ..+....-.+.-..|.+ ++.|.++.++++|+++.++++.+.+... .+ ..++.+
T Consensus 243 ----llI~DEv~tG~gr-~G~~~~~~~~gv~pDi~--t~sK~lg~G~pigav~~~~~i~~~~~~~-~~----~~T~~~-- 308 (433)
T PRK08117 243 ----LLIFDEVQTGFGR-TGEWFAAQTFGVVPDIM--TIAKGIASGLPLSAVVASKELMEQWPLG-SH----GTTFGG-- 308 (433)
T ss_pred ----EEEEecchhccCc-cccchhHhhcCCCCCEe--ehhhhccCCCcceeEEEcHHHHhhccCC-CC----CCCCCc--
Confidence 9999999986422 11111000011125664 5569999889999999998877655321 11 112222
Q ss_pred CChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcC--CeEee-cCCe-eE--EEEecC----Cc---HHH---
Q 011842 347 NGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAG--ISAML-NELS-ST--VVFERP----QD---EEF--- 410 (476)
Q Consensus 347 ~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g--~~~~~-~~~~-~i--v~f~~~----~~---~~~--- 410 (476)
.++.+.+++..+..-.-+...++..++.+++++.|++.. ...+. .+.. .+ +-|..+ .. ..+
T Consensus 309 ---np~~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~Gl~~gi~~~~~~~~~~~~~~~~~~~~ 385 (433)
T PRK08117 309 ---NPVACAAALATLEVIKEEKLLDNANEMGAYALERLEVLKEKHPVIGDVRGIGLMIGIEIVDPDGEPDGDAVEKILDK 385 (433)
T ss_pred ---CHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCceeeeecCCcEEEEEEecCCCCcchHHHHHHHHH
Confidence 233333333333211112456677777888888887642 11111 1111 12 223221 11 111
Q ss_pred --hhceee-cc--cCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 011842 411 --VRRWQL-AC--QGNIAHVVVMPNVTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 411 --~~~~~l-~~--~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~ 450 (476)
.++..+ +. .++.+|++++..+|+++||++++.|.++.+++
T Consensus 386 l~~~Gv~~~~~g~~~~~lRl~p~~~~t~~~i~~~~~~l~~~l~~~ 430 (433)
T PRK08117 386 CLEKGLLFYLCGNAGNVLRMIPPLTVTKEEIDEGLDILDEALTEY 430 (433)
T ss_pred HHHCCCEEeecCCCCCEEEEeCCccCCHHHHHHHHHHHHHHHHHH
Confidence 122222 21 24789999888999999999999999988765
No 296
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.61 E-value=3.9e-13 Score=139.71 Aligned_cols=284 Identities=17% Similarity=0.094 Sum_probs=166.6
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHH-HHcC------------
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAA-RMYR------------ 205 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~-~~~G------------ 205 (476)
..+.++.+++++++.- .+ ..++|++|++||..|+..++....+..|+..+.+|......+ ...|
T Consensus 90 ~~~~~la~~L~~~~~~-~~--~v~~~~sGseA~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~ 166 (426)
T PRK00062 90 ELEVELAELVIELVPS-IE--MVRMVNSGTEATMSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSP 166 (426)
T ss_pred HHHHHHHHHHHHhCCC-CC--EEEEecCHHHHHHHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCC
Confidence 5555777777776631 12 388999999999999999887534455665555544432211 1111
Q ss_pred Ce-------EEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC----HHHHHHHHHHhCCCCCceEEEE
Q 011842 206 ME-------CVKVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD----LDLVIQTLEESGFTQDRFYIHC 274 (476)
Q Consensus 206 ~~-------v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~----l~~I~~ia~~~g~~~~~~~lhv 274 (476)
.. ...+|. -|+++|++.+.+...+...|++....++.|.+.| +++|.++|++||+ ++++
T Consensus 167 ~~~~~~~~~~~~~~~-----~d~~~l~~~i~~~~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~-----llI~ 236 (426)
T PRK00062 167 GVPEDFAKHTLTAPY-----NDLEAVEELFEEYGDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGA-----LLIF 236 (426)
T ss_pred CCCcccccceEEcCC-----CCHHHHHHHHHhCCCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCC-----EEEE
Confidence 00 111221 2789999999764444557777766788899988 9999999999999 9999
Q ss_pred ecCcccccccccccC-CCCCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCC-ccccCCCCCcccCCCCChhHH
Q 011842 275 DGALFGLMMPFVKKA-PKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSN-VEYLASRDATIMGSRNGHAPI 352 (476)
Q Consensus 275 D~a~~g~~~~~~~~~-~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~-~~yl~~~~~~~~~sr~~~~~l 352 (476)
|++|.|+.. ..... ..+.. ..|.+ ++.|.+++++++|++++++++.+.+... ..|.. .++.+.+ ....
T Consensus 237 DEv~~G~r~-g~~~~~~~~~~--~pDi~--~~gK~l~~G~p~ga~~~~~~i~~~~~~~~~~~~~---~T~~~~p--~~~a 306 (426)
T PRK00062 237 DEVMTGFRV-ALGGAQGYYGV--TPDLT--TLGKIIGGGLPVGAFGGRREIMEQLAPLGPVYQA---GTLSGNP--LAMA 306 (426)
T ss_pred eechhcccc-CCccHHHHhCC--CcchH--hhhhHhhCCCcceeeeEHHHHHHhhccCCCceec---ccCcCCH--HHHH
Confidence 999986522 11110 00111 14644 4569888888999999988877766321 11211 1112221 1122
Q ss_pred HHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHh----cCCeEeecCCeeEEEEecCC------------c----HHH--
Q 011842 353 FLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLD----AGISAMLNELSSTVVFERPQ------------D----EEF-- 410 (476)
Q Consensus 353 ~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~g~~~~~~~~~~iv~f~~~~------------~----~~~-- 410 (476)
+..++++.+..+ +..++..++.++++++|++ .++..-......++.+...+ + ..+
T Consensus 307 aa~a~L~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~vrg~G~~~~i~l~~~~~~~~~~~~~~~~~~~~~i~~ 383 (426)
T PRK00062 307 AGLATLKLLKEP---GFYEELEALTKRLAEGLKEAAKKAGIPLTVNRVGSMFGLFFTDEPVTNYADAKKSDTERFARFFH 383 (426)
T ss_pred HHHHHHHHHhcc---hHHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecceEEEEEecCCCcchhhhccccHHHHHHHHH
Confidence 223334443222 4667777777778777764 35433222222333322110 1 111
Q ss_pred ---hhceeecccC-CEEEEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 011842 411 ---VRRWQLACQG-NIAHVVVMPNVTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 411 ---~~~~~l~~~~-~~lRv~~~~~~T~edid~~~~~l~~~~~~~ 450 (476)
.+++.+...+ +.+++ +..+|++|||.+++.|+++.+++
T Consensus 384 ~l~~~Gv~v~~~~~~~~~~--~~~~t~~ei~~~~~~l~~~l~~~ 425 (426)
T PRK00062 384 AMLDEGVYLAPSQFEAGFV--SAAHTDEDIEKTLEAARKAFAAL 425 (426)
T ss_pred HHHHCCeEeecCCcCceee--eccCCHHHHHHHHHHHHHHHHhh
Confidence 1233333222 34444 57889999999999999987653
No 297
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.60 E-value=1.4e-12 Score=143.51 Aligned_cols=334 Identities=13% Similarity=0.075 Sum_probs=204.1
Q ss_pred cHHHHHHHHHHHHhcc--cccccCCCCcCCcchHHHH-HHHHHhhCCCCCCcccCcc----chhhHHHHHHHHHHHHHHc
Q 011842 80 YMAGVLARYRKTLMER--TKHHLGYPYNLDFDYGALA-QLQHFSINNLGDPFIESNY----GVHSRQFEVGVLDWFARLW 152 (476)
Q Consensus 80 ~~~~il~~~~~~~~~~--~~~~~g~p~~~~~~~~~l~-~~l~~~~n~~g~~~~~~~~----~~~~~~le~~~~~~la~l~ 152 (476)
+-.++++.+++....+ ...++|--.+..+.++.+. .++ .+.+.-..++|+ ..+.-+.--+...++++|.
T Consensus 47 sE~e~~~~~~~la~~N~~~~~fig~G~y~~~~p~~i~r~v~----~~p~~~TaytPyQ~EisQG~Le~l~e~Qt~i~eLt 122 (939)
T TIGR00461 47 KEYEALAHLKKIASKNHKFKSYIGMGYYGTILPPVIQRNLL----ENPGWYTAYTPYQPEISQGRLEALLNFQTVVSDLT 122 (939)
T ss_pred CHHHHHHHHHHHHhcCCCccccCCCCcCCCcCChHHHHHHH----hCchhhhcCCCCChhhhhHHHHHHHHHHHHHHHHH
Confidence 4568888888876554 2234553333222234443 333 222211111222 2244455556788999999
Q ss_pred CCCCCcccEEEcCCchhHHHHHHHHHHh-hCCCcEEEecCCCchHHHHHH----HHcCCeEEEEeCCCCCccCHHHHHHH
Q 011842 153 ELENNEYWGYITNCGTEGNLHGILVGRE-VFPDGILYASRESHYSVFKAA----RMYRMECVKVDCLISGEIDCADFKAK 227 (476)
Q Consensus 153 g~~~~~~~g~~t~ggt~An~~al~aa~~-~~p~~~Vl~s~~~H~S~~~~~----~~~G~~v~~v~~~~~g~~D~~~Le~~ 227 (476)
|++..+ .-+..++|.+.-..+++.+. +.++..|++++..|+...... +..|++++.++ +++|++.
T Consensus 123 Gm~~aN--aSl~d~atA~aEa~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~~--------~~~l~~~ 192 (939)
T TIGR00461 123 GLPVAN--ASLLDEGTAAAEAMALSFNVSKKKANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVVD--------CSDIKKA 192 (939)
T ss_pred CCChhh--hhccchhhHHHHHHHHHHHhhcCCCCEEEECCCCCcchHHHHHHHHHhcCcEEEEEc--------HHHHhhc
Confidence 998643 44555665543333333222 124478999999998866433 46788888873 4566655
Q ss_pred HHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCcccccEEEEcCCC
Q 011842 228 LLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKPIGSVSVSGHK 307 (476)
Q Consensus 228 l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~~Dsi~~s~hK 307 (476)
+ ++ +.|+++. .+..|.+.|+++|+++++++|. +++++.-.-...+.. -.+.-++|+++.+.++
T Consensus 193 ~--~~---~~v~~q~-Pn~~G~ied~~~i~~~~h~~ga-----l~~~~ad~~al~ll~------~Pge~GaDi~vg~~q~ 255 (939)
T TIGR00461 193 V--DV---FGCLLQY-PATDGSILDYKQLIDALHSHKS-----LVSVAADLMALTLLT------PPGHYGADIVLGSSQR 255 (939)
T ss_pred C--CE---EEEEEEC-CCCCeEEecHHHHHHHHHHcCC-----EEEEEechHHhCCcC------CHHHcCCcEEeeCCCc
Confidence 5 22 3555554 4577999999999999999999 999965443322210 1112248999666666
Q ss_pred CCC----CCCCceeEEeehhhhhhhcCC-------c----cccC---CCCCcc--------cCCCCChhHHHHHHHHHHh
Q 011842 308 FVG----CPMPCGVQITRMEHINVLSSN-------V----EYLA---SRDATI--------MGSRNGHAPIFLWYTLNRK 361 (476)
Q Consensus 308 ~l~----~p~~~G~l~~~~~~~~~l~~~-------~----~yl~---~~~~~~--------~~sr~~~~~l~~~~~l~~~ 361 (476)
|+. +++..|++.+++++.+.++.. . .|.. .....+ .|+-....++..+..+.++
T Consensus 256 fg~p~g~GGP~aG~~a~~~~l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrRekAtSNICt~qaL~a~~a~~Y~~~~ 335 (939)
T TIGR00461 256 FGVPMGYGGPHAAFFAVKDEYNRKMPGRIVGVSKDALGNTALRLALQTREQHIRRDKATSNICTAQVLLANVASSYCVYH 335 (939)
T ss_pred cCCCCCCCCCceeeeeecHhhHhhCCCCceeEEecCCCCccceeecccccccccccccCcchhHHHHHHHHHHHHHHHHH
Confidence 554 134589999999887665321 0 1111 100001 1121111222233346788
Q ss_pred ChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecC--CcHHHh-----hceeeccc-CCEEEEEEcCCCCH
Q 011842 362 GYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERP--QDEEFV-----RRWQLACQ-GNIAHVVVMPNVTI 433 (476)
Q Consensus 362 g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~--~~~~~~-----~~~~l~~~-~~~lRv~~~~~~T~ 433 (476)
|.+|++++.++.+.++.+|.+.|++.|+....++....+.++.+ +.+++. +++.+... .+.++++++..+|+
T Consensus 336 G~~GL~~iA~~~~~~a~~l~~~L~~~G~~~~~~~fF~~~~v~~~~~~~~~i~~~~~~~gi~l~~~~~~~i~~s~~E~~t~ 415 (939)
T TIGR00461 336 GPKGLKNIARRIHSLTSILANGLENDPHELINKTWFDTLTVKVGNGISSELLKAAEEFNINLRAVDTTTVGIALDETTTK 415 (939)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCccceEEEEeCCCCHHHHHHHHHHCCCeeeecCCCEEEEEeecCCCH
Confidence 99999999999999999999999999886655544556666654 323322 34444432 46799999999999
Q ss_pred HHHHHHHHHHH
Q 011842 434 DKLDDFLNELI 444 (476)
Q Consensus 434 edid~~~~~l~ 444 (476)
+||+.|++.+.
T Consensus 416 ~di~~l~~~~~ 426 (939)
T TIGR00461 416 ADVENLLKVFD 426 (939)
T ss_pred HHHHHHHHHhc
Confidence 99999999995
No 298
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.60 E-value=5.8e-13 Score=138.49 Aligned_cols=284 Identities=16% Similarity=0.095 Sum_probs=160.4
Q ss_pred HHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHH-c--CC----------
Q 011842 140 FEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARM-Y--RM---------- 206 (476)
Q Consensus 140 le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~-~--G~---------- 206 (476)
...++++.+++++... ...++|+|||+|+..|++++|....++.|++.+.+|......+.. . +.
T Consensus 89 ~~~~lae~l~~~~~~~---~~v~~~~sGseA~e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~ 165 (423)
T TIGR00713 89 AEILLAKEIISRVPSV---EMVRFVNSGTEATMSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPG 165 (423)
T ss_pred HHHHHHHHHHHhCCcc---cEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCCCCCCC
Confidence 3345556666655432 248999999999999999998765567777777665554322211 1 11
Q ss_pred -------eEEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC----HHHHHHHHHHhCCCCCceEEEEe
Q 011842 207 -------ECVKVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD----LDLVIQTLEESGFTQDRFYIHCD 275 (476)
Q Consensus 207 -------~v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~----l~~I~~ia~~~g~~~~~~~lhvD 275 (476)
.+..+|. -|+++|++.+.+...++..|++....+.+|.+.| +++|.++|++||+ ++++|
T Consensus 166 ~~~~~~~~~~~~~~-----~d~~~l~~~i~~~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~-----llI~D 235 (423)
T TIGR00713 166 VPEDFAKLTLVLPY-----NDLEALEEVFEEYGEEIAGVIVEPVAGNMGVVPPKPEFLAGLRALTEEYGS-----LLIFD 235 (423)
T ss_pred CCcccccceEEeCC-----CCHHHHHHHHHHcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHhCC-----EEEEE
Confidence 1122222 2899999999754344456666544445788866 7999999999999 99999
Q ss_pred cCcccccccccccCCCCCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHH
Q 011842 276 GALFGLMMPFVKKAPKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLW 355 (476)
Q Consensus 276 ~a~~g~~~~~~~~~~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~ 355 (476)
++|.++.....-....+.. ..|.+ ++.|.++.++++|+++.++++.+.+.....+.. ..++.+ .++.+.
T Consensus 236 Ev~~g~r~g~~~~~~~~~~--~pDi~--t~sK~l~~G~pig~v~~~~~i~~~~~~~~~~~~--~~T~~~-----~~~~~a 304 (423)
T TIGR00713 236 EVMTGFRVALGGAQEYFGV--EPDLT--TLGKIIGGGLPVGAFGGRREIMERLAPEGPVYQ--AGTLSG-----NPLAMA 304 (423)
T ss_pred ccccccccCcchhHHHhCC--Ccchh--hhhhhhcCCCceeeeeEHHHHHHhhCcCCCeee--ccCCCC-----CHHHHH
Confidence 9997663210000001111 24644 467999888999999999888766642111110 011121 234444
Q ss_pred H---HHHHhChhcH-HHHHHHHHHHHHHHHHHHHhcCCeEee-cCCeeE-EEEecCC----------c-H---HHh----
Q 011842 356 Y---TLNRKGYKGF-QKEVQKCLRNAHYLKDRLLDAGISAML-NELSST-VVFERPQ----------D-E---EFV---- 411 (476)
Q Consensus 356 ~---~l~~~g~~g~-~~~~~~~~~~a~~l~~~L~~~g~~~~~-~~~~~i-v~f~~~~----------~-~---~~~---- 411 (476)
+ +++.+...++ +...+....+.+.|.+.+++.++.... .....+ +.|..+. + . .+.
T Consensus 305 aa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 384 (423)
T TIGR00713 305 AGLATLKLLDEEGVYTELDELAKRLAEGLSEVLEDTGIPHTVNRVGSMFSLFFTEEEVTNYADAKKSDTELFAKFFHEML 384 (423)
T ss_pred HHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeccEEEEEEecCCCCChhhhhcccHHHHHHHHHHHH
Confidence 4 4443322222 222233333444445555556654322 233222 2233211 1 1 111
Q ss_pred -hceeeccc-CCEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Q 011842 412 -RRWQLACQ-GNIAHVVVMPNVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 412 -~~~~l~~~-~~~lRv~~~~~~T~edid~~~~~l~~~~~~ 449 (476)
+++.+... .+.+|+ ++.+|+++|+.+++.|.++.++
T Consensus 385 ~~Gv~v~~~~~~~~~l--~~~~t~~~i~~~~~~l~~~l~~ 422 (423)
T TIGR00713 385 DKGVFLPPSQFEACFL--SAAHTEEDIENTIEAAEEVFAE 422 (423)
T ss_pred HCCeEEecCCccceee--ECCCCHHHHHHHHHHHHHHHhh
Confidence 22223222 234554 4558999999999999988754
No 299
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.60 E-value=2.5e-12 Score=129.05 Aligned_cols=285 Identities=18% Similarity=0.150 Sum_probs=181.8
Q ss_pred HHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEE-ecCCCchHHHHHHHHc------------
Q 011842 138 RQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILY-ASRESHYSVFKAARMY------------ 204 (476)
Q Consensus 138 ~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl-~s~~~H~S~~~~~~~~------------ 204 (476)
+++|.++.+.+.++++.-. ..-|+++||||++.|++.||-.-.++.|+ +....|.+.....--.
T Consensus 92 te~Ei~~Aell~~~~p~~e---~vrfvnSGTEAtmsAiRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s 168 (432)
T COG0001 92 TELEVELAELLIERVPSIE---KVRFVNSGTEATMSAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSS 168 (432)
T ss_pred CHHHHHHHHHHHHhcCccc---EEEEecchhHHHHHHHHHHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCC
Confidence 5899999999999987631 27899999999999999999865555555 4444554433322211
Q ss_pred -CC------eEEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC----HHHHHHHHHHhCCCCCceEEE
Q 011842 205 -RM------ECVKVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD----LDLVIQTLEESGFTQDRFYIH 273 (476)
Q Consensus 205 -G~------~v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~----l~~I~~ia~~~g~~~~~~~lh 273 (476)
|+ .++.+|.| |++.|++++++.++....|++.-.-+..|.+.| +++|.++|++||+ +|+
T Consensus 169 ~Gvp~~~a~~ti~~~yN-----D~~al~~~~~~~g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~-----lLI 238 (432)
T COG0001 169 PGVPADVAKHTLVLPYN-----DLEALEEAFEEYGDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGA-----LLI 238 (432)
T ss_pred CCCChhhhccEEEecCC-----CHHHHHHHHHHcCCcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCc-----EEE
Confidence 22 25566666 999999999998777777877766777788866 8899999999999 999
Q ss_pred EecCcccccccccccCCCCCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcC-CccccCCCCCcccCCCCChhHH
Q 011842 274 CDGALFGLMMPFVKKAPKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSS-NVEYLASRDATIMGSRNGHAPI 352 (476)
Q Consensus 274 vD~a~~g~~~~~~~~~~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~-~~~yl~~~~~~~~~sr~~~~~l 352 (476)
.|++..|+-.+. ...+.+-+.+ .|..+. -|.++.+.++|++..|.+.++.+.. .+.|. .||-++. ++
T Consensus 239 ~DEViTGFR~~~-gGaq~~~gi~-PDlttl--GKiIGGGlP~ga~gGr~eiM~~~~p~g~vyq-------aGT~sgn-pl 306 (432)
T COG0001 239 FDEVITGFRVAL-GGAQGYYGVE-PDLTTL--GKIIGGGLPIGAFGGRAEIMEQLAPLGPVYQ-------AGTLSGN-PL 306 (432)
T ss_pred EecchhhcccCC-cccccccCcC-cchhhh--hhhhcCCcceeeeccHHHHHhhhCCCCCccc-------cCCCCCc-HH
Confidence 999987765541 1111122222 576664 4999999999999999998876633 23343 2233322 34
Q ss_pred HHHH---HHHHhCh-hcHHHHHHHHHHHHHHHHHHH----HhcCCeEeecCC-e-eEEEEecC--Cc---------HHHh
Q 011842 353 FLWY---TLNRKGY-KGFQKEVQKCLRNAHYLKDRL----LDAGISAMLNEL-S-STVVFERP--QD---------EEFV 411 (476)
Q Consensus 353 ~~~~---~l~~~g~-~g~~~~~~~~~~~a~~l~~~L----~~~g~~~~~~~~-~-~iv~f~~~--~~---------~~~~ 411 (476)
.+.+ +++.+.. ++ ..+++.+++++|.+.| .+.++....... + .-++|... .. +.+.
T Consensus 307 amaAG~atl~~l~~~~~---~y~~l~~~~~~L~~gl~~~~~~~g~~~~v~~~gsm~~i~F~~~~~~n~~da~~sd~~~~~ 383 (432)
T COG0001 307 AMAAGLATLEELMTEEG---VYERLDALGERLAEGLRAAAERHGIPLTVNRVGSMFGIFFTEEGVRNYADAKRSDVERFA 383 (432)
T ss_pred HHHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeecceEEEEecCCCCCCHHHHHhhchHHHH
Confidence 4433 3343322 22 3444444555555544 455665544433 2 33444331 11 1111
Q ss_pred --------hceeecccCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 011842 412 --------RRWQLACQGNIAHVVVMPNVTIDKLDDFLNELIENRSTWY 451 (476)
Q Consensus 412 --------~~~~l~~~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~ 451 (476)
++..++... .=...++..+|++|||+++++++++.+.+.
T Consensus 384 ~~~~~~l~~GV~l~ps~-~ea~flS~ahte~di~~~~~a~~~~~~~~~ 430 (432)
T COG0001 384 KFFHHLLNRGVYLAPSQ-FEAGFLSTAHTEEDIDRTLEAADEAFKELA 430 (432)
T ss_pred HHHHHHHhCCcccCCcc-ccceeeecccCHHHHHHHHHHHHHHHHHhh
Confidence 111222222 113567788999999999999999888765
No 300
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.59 E-value=3.2e-12 Score=133.57 Aligned_cols=289 Identities=17% Similarity=0.104 Sum_probs=176.1
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCC---CcEEEecCCCchHH-HHHHHHcCC--------
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFP---DGILYASRESHYSV-FKAARMYRM-------- 206 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p---~~~Vl~s~~~H~S~-~~~~~~~G~-------- 206 (476)
+...++.+.+++++.-+. ...+|+++||+||-.|++.+|.... +..|++.+.+|... .-+....+-
T Consensus 124 ~~~~~lae~L~~~~p~~~--~~v~f~~SGsEAve~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~ 201 (459)
T PRK11522 124 PLRAMLAKTLAALTPGKL--KYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFM 201 (459)
T ss_pred HHHHHHHHHHHHhCCCCC--CEEEEeCCchHHHHHHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCCC
Confidence 556667777877764322 2489999999999999999987532 33455555444333 222222221
Q ss_pred ----eEEEEeCCCCCccCHHHHHHHHHc---CCCCcEEEEEeeCCCccccccC----HHHHHHHHHHhCCCCCceEEEEe
Q 011842 207 ----ECVKVDCLISGEIDCADFKAKLLQ---NKDKPAIINVNIGTTVKGAVDD----LDLVIQTLEESGFTQDRFYIHCD 275 (476)
Q Consensus 207 ----~v~~v~~~~~g~~D~~~Le~~l~~---~~~~p~~vv~t~gtt~tG~id~----l~~I~~ia~~~g~~~~~~~lhvD 275 (476)
.+..+|.+ |.++|++.|+. .......|++....+..|.+.| ++++.++|++||+ ++++|
T Consensus 202 ~~~~~~~~~~~~-----d~~~l~~~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~-----llI~D 271 (459)
T PRK11522 202 PLLPGFRHVPFG-----NIEAMRTALSECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGA-----LLILD 271 (459)
T ss_pred CCCCCCcccCCC-----CHHHHHHHHHHhhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCC-----EEEec
Confidence 12223322 78889988864 2334556777666788888887 9999999999999 99999
Q ss_pred cCccccccccccc-CCCCCCcccccEEEEcCCCCCCCC-CCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHH
Q 011842 276 GALFGLMMPFVKK-APKVSFKKPIGSVSVSGHKFVGCP-MPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIF 353 (476)
Q Consensus 276 ~a~~g~~~~~~~~-~~~~~~~~~~Dsi~~s~hK~l~~p-~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~ 353 (476)
+++.|+-- ..+. .....+. ..|.+++ .|.++.+ .++|.++++++..+.+... .+.. ..|+.+.+ .....
T Consensus 272 EV~tG~GR-tG~~~a~e~~gv-~PDivt~--gK~lggG~~Pigav~~~~~i~~~~~~~-~~~~--~~T~~gnp--~~~Aa 342 (459)
T PRK11522 272 EVQTGMGR-TGKMFACEHENV-QPDILCL--AKALGGGVMPIGATIATEEVFSVLFDN-PFLH--TTTFGGNP--LACAA 342 (459)
T ss_pred cceecCCc-cchhhhhhccCC-CCCEEEe--chhhhCCCccceeEEEcHHHHHHhccC-Cccc--CCCCCCCH--HHHHH
Confidence 99965311 1111 0001111 2687755 5998877 4899999998876655321 1211 12223222 11222
Q ss_pred HHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcC--Ce-Ee--ecCCeeEEEEecCCc---HHH-----hhceeecc--
Q 011842 354 LWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAG--IS-AM--LNELSSTVVFERPQD---EEF-----VRRWQLAC-- 418 (476)
Q Consensus 354 ~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g--~~-~~--~~~~~~iv~f~~~~~---~~~-----~~~~~l~~-- 418 (476)
..++++.+.. ++..++..++.++|++.|++.. .. .+ +.....++.+...++ ..+ .+++.+..
T Consensus 343 ala~L~~i~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~VrG~Gl~~giel~~~~~~~~i~~~l~~~Gvl~~~~~ 419 (459)
T PRK11522 343 ALATINVLLE---QNLPAQAEQKGDYLLDGFRQLAREYPDLVQEARGKGMLMAIEFVDNEIGYNFASEMFRQRVLVAGTL 419 (459)
T ss_pred HHHHHHHHhc---chHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEeceeEEEEEecCchHHHHHHHHHHHCCeEEEecC
Confidence 3344554433 3467788888899999888752 21 11 111233444443322 111 23333432
Q ss_pred -cCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 011842 419 -QGNIAHVVVMPNVTIDKLDDFLNELIENRSTWY 451 (476)
Q Consensus 419 -~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~ 451 (476)
.++.+|+.....+|++|||+++++|.++.+.+.
T Consensus 420 ~~~~~lr~~Ppl~~t~~~id~~l~~l~~~l~~~~ 453 (459)
T PRK11522 420 NNAKTIRIEPPLTLTIEQCEQVLKAARKALAAMR 453 (459)
T ss_pred CCCCEEEEECCccCCHHHHHHHHHHHHHHHHHHH
Confidence 357899999999999999999999999887654
No 301
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.59 E-value=9e-13 Score=129.04 Aligned_cols=293 Identities=13% Similarity=0.079 Sum_probs=193.7
Q ss_pred hhHHHHHHHHHHHHHHcCCC--CCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHc-CCeEEEEe
Q 011842 136 HSRQFEVGVLDWFARLWELE--NNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMY-RMECVKVD 212 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~--~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~-G~~v~~v~ 212 (476)
|...+++++++.|.+.-|-. -++...++|+|+|.||-+.+-+..+ ||+..+++.+.|..+..-+++. |+++++|.
T Consensus 122 Gl~~frqa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fcLad--pgdafLvPtPyY~gfdrdl~~rTgveivpv~ 199 (471)
T KOG0256|consen 122 GLPSFRQAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCLAD--PGDAFLVPTPYYPGFDRDLRWRTGVEIVPVH 199 (471)
T ss_pred CchHHHHHHHHHHHHHhCCCCccCccceEEecccchhhHHHHHHhcC--CCceeeecCCCCCcccccceeccCceEEEEE
Confidence 55689999999998877643 2234589999999999887777777 9999999999999998766665 88999999
Q ss_pred CCC--CCccCHHHHHHHHHcC---CCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCccccccc
Q 011842 213 CLI--SGEIDCADFKAKLLQN---KDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMP 284 (476)
Q Consensus 213 ~~~--~g~~D~~~Le~~l~~~---~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~ 284 (476)
+.. +.++++++||+++.+. ..+..-|++++|+|+.|++-+ +..+.+++.++++ .+++|++|++.++.
T Consensus 200 c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kni-----HvI~DEIya~sVF~ 274 (471)
T KOG0256|consen 200 CSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNI-----HVISDEIYAGSVFD 274 (471)
T ss_pred eecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcce-----EEEeehhhcccccC
Confidence 864 4689999999998753 334456888999999999865 6667778889999 99999999987764
Q ss_pred ccccCC------CCCCc-ccccEEEEcCCCCCCCCCCceeEEeehhh-hhhhcCCccccCCCCCcccCCCCChhHHHHHH
Q 011842 285 FVKKAP------KVSFK-KPIGSVSVSGHKFVGCPMPCGVQITRMEH-INVLSSNVEYLASRDATIMGSRNGHAPIFLWY 356 (476)
Q Consensus 285 ~~~~~~------~~~~~-~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~-~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~ 356 (476)
...-.+ ..... .++.++..-++-++..+.+.|+++..++. ..+..+...|- . - .+.-|..
T Consensus 275 ~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~ne~VvsaA~kmssf~-~--------v---Ss~tQ~~ 342 (471)
T KOG0256|consen 275 KSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNEDVVSAATKMSSFG-L--------V---SSQTQYL 342 (471)
T ss_pred ccCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecChHHHHHHHHHhhcc-C--------C---cHHHHHH
Confidence 332211 11111 22444444444466677899999998874 33333222221 1 0 1122222
Q ss_pred HHHHh-----ChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecC------Cc--H--HHhh------cee
Q 011842 357 TLNRK-----GYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERP------QD--E--EFVR------RWQ 415 (476)
Q Consensus 357 ~l~~~-----g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~------~~--~--~~~~------~~~ 415 (476)
....+ -..-+++...|+...-+|+.+.|++.|+..+ +..+++.+|..- .+ . ++.+ ++.
T Consensus 343 la~LLSD~~f~~~yl~en~~Rl~~rh~~~~~gLk~lgI~cl-~s~AGlF~wvDlr~lL~s~tfe~El~Lw~~i~~~vkln 421 (471)
T KOG0256|consen 343 LASLLSDEEFTREYLRENNKRLRIRHRYIVEGLKALGIPCL-KSNAGLFCWVDLRKLLTSLTFEGELELWERILDNVKLN 421 (471)
T ss_pred HHHHhchHHHHHHHHHHHHHHHHHHHHHHHhhHHhcCCcee-ecCCeeEEEEEhHHhcCcCChHHHHHHHHHHHHhhccc
Confidence 22222 2223455666777778889999999998654 566666666421 11 1 1122 333
Q ss_pred ecc-------cCCEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Q 011842 416 LAC-------QGNIAHVVVMPNVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 416 l~~-------~~~~lRv~~~~~~T~edid~~~~~l~~~~~~ 449 (476)
++. ..+++|+++. +..++.++-.++.|++....
T Consensus 422 lSpG~s~~C~EpGWFRvcFA-n~~~~t~~~am~Ri~~~~~~ 461 (471)
T KOG0256|consen 422 LSPGSSCHCHEPGWFRVCFA-NMSEETLEVAMRRLKQFLDS 461 (471)
T ss_pred cCCCCcceecCCCeEEEEec-cCCHHHHHHHHHHHHHHHHh
Confidence 432 2589999874 34455555566666665553
No 302
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.58 E-value=7e-13 Score=128.67 Aligned_cols=276 Identities=15% Similarity=0.123 Sum_probs=184.6
Q ss_pred hHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCch----HHHHHHHHcCCeEEEEe
Q 011842 137 SRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHY----SVFKAARMYRMECVKVD 212 (476)
Q Consensus 137 ~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~----S~~~~~~~~G~~v~~v~ 212 (476)
...+|++ ++.|-|-- ..+.|++|..|..+|+..... +||.|+.+..-|. -+....+.+|++++.|.
T Consensus 64 ~~vlE~R----iAaLEGG~----aa~a~aSG~AA~~~ai~~la~--aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~fvd 133 (426)
T COG2873 64 TDVLEER----IAALEGGV----AALAVASGQAAITYAILNLAG--AGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRFVD 133 (426)
T ss_pred HHHHHHH----HHHhhcch----hhhhhccchHHHHHHHHHhcc--CCCeeEeeccccCchHHHHHHHHHhcCcEEEEeC
Confidence 4456655 44444432 267788999999999988776 9999998876552 23456688899999998
Q ss_pred CCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCC
Q 011842 213 CLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKV 292 (476)
Q Consensus 213 ~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~ 292 (476)
.+ |++.++++|+++|+ +|.+..-.|+.+.+.|+++|+++|+++|+ .++||-..+..++. -
T Consensus 134 ~~-----d~~~~~~aI~~nTk---avf~EtigNP~~~v~Die~ia~iAh~~gv-----pliVDNT~atpyl~-------r 193 (426)
T COG2873 134 PD-----DPENFEAAIDENTK---AVFAETIGNPGLDVLDIEAIAEIAHRHGV-----PLIVDNTFATPYLC-------R 193 (426)
T ss_pred CC-----CHHHHHHHhCcccc---eEEEEeccCCCccccCHHHHHHHHHHcCC-----cEEEecCCCcceec-------c
Confidence 77 89999999999998 78888888999999999999999999999 99999998765442 1
Q ss_pred CCcccccEEEEcCCCCCCC-CCCceeEEeehhhhhhh-cCCccccCCCCCccc--------------------CCCCC--
Q 011842 293 SFKKPIGSVSVSGHKFVGC-PMPCGVQITRMEHINVL-SSNVEYLASRDATIM--------------------GSRNG-- 348 (476)
Q Consensus 293 ~~~~~~Dsi~~s~hK~l~~-p~~~G~l~~~~~~~~~l-~~~~~yl~~~~~~~~--------------------~sr~~-- 348 (476)
.+..++|+++-|..||+++ +..+|.+++.....+.. ....+.+...+.++. +-|..
T Consensus 194 P~~hGADIVvHS~TK~igGhGt~iGG~iVD~G~FDw~~~~rfP~~~~p~p~YhGl~~~~~~g~~af~~~~r~~~lRDlGa 273 (426)
T COG2873 194 PIEHGADIVVHSATKYIGGHGTAIGGVIVDGGKFDWTANGRFPEFTTPDPSYHGLVYTETFGNAAFIIKARVQLLRDLGA 273 (426)
T ss_pred hhhcCCCEEEEeecccccCCccccceEEEeCCccccccCCCCcccCCCCccccceehhhhcccHHHHHHHHHHHHHhccc
Confidence 1223499999999999973 45566677654321111 111111111111111 01110
Q ss_pred -hhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeec-C------------------CeeEEEEecCCc-
Q 011842 349 -HAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLN-E------------------LSSTVVFERPQD- 407 (476)
Q Consensus 349 -~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~-~------------------~~~iv~f~~~~~- 407 (476)
..+...|. -..|.+.+.-+++|..+|+..+.+.|++++....++ | ...++.|...+.
T Consensus 274 ~lsPfnAfl--~lqGlETL~LRmerH~~NA~~vA~~L~~HpkV~~V~YpgL~~~~~h~la~kyl~~g~g~vltF~~kgg~ 351 (426)
T COG2873 274 TLSPFNAFL--LLQGLETLSLRMERHCENALKVAEFLENHPKVAWVNYPGLASHPYHALAKKYLPKGAGAVLTFGVKGGY 351 (426)
T ss_pred ccCcHHHHH--HHhchhhhHHHHHHHHHhHHHHHHHHhcCCCeeeeecCCCCCCcchhHHHhhccCCCceEEEEEecChH
Confidence 11222332 234667788899999999999999999987543321 1 125777876654
Q ss_pred ---HHHhhceee----------------c-----------------ccCCEEEEEEcCCCCHHHHHHHHHHHHHHHH
Q 011842 408 ---EEFVRRWQL----------------A-----------------CQGNIAHVVVMPNVTIDKLDDFLNELIENRS 448 (476)
Q Consensus 408 ---~~~~~~~~l----------------~-----------------~~~~~lRv~~~~~~T~edid~~~~~l~~~~~ 448 (476)
..+++.+.+ | -....+|+|+. .||++.++.+|+++.+
T Consensus 352 ea~~~fi~~l~L~s~laNvGD~rsLvIHPAsTTH~ql~~ee~~~aGv~~~~IRlSVG----IEd~~DiiaDl~qAl~ 424 (426)
T COG2873 352 EAGKKFIDALKLFSHLANIGDARSLVIHPASTTHRQLSEEEQAAAGVTPDLIRLSVG----IEDIDDIIADLEQALE 424 (426)
T ss_pred HHHHHHHHHHHHHHhhccccccceeEecCcccchhcCCHHHHHhcCCCCCcEEEEec----cCCHHHHHHHHHHHHh
Confidence 223332221 0 01256888775 6888888988888654
No 303
>PRK06541 hypothetical protein; Provisional
Probab=99.57 E-value=6.5e-12 Score=131.43 Aligned_cols=294 Identities=10% Similarity=0.022 Sum_probs=170.2
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhC------CCcEEEecC-CCchHHHHHHHHcCC-----
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVF------PDGILYASR-ESHYSVFKAARMYRM----- 206 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~------p~~~Vl~s~-~~H~S~~~~~~~~G~----- 206 (476)
+...++.+.+.+++.-+. ...+|+++||+|+-.|+..+|... .+..|+.-+ .-|....-+....|.
T Consensus 95 ~~~~~la~~l~~~~p~~~--~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~ 172 (460)
T PRK06541 95 PPAIELAERLAALAPGDL--NRVFFTTGGSEAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKA 172 (460)
T ss_pred HHHHHHHHHHHHhCCCCc--CEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhcc
Confidence 455567777777764322 248999999999999999998641 134454444 444333322222221
Q ss_pred -------eEEEEeCCCCC-----ccC--------HHHHHHHHHcC-CCCcEEEEEeeCCCccccccC----HHHHHHHHH
Q 011842 207 -------ECVKVDCLISG-----EID--------CADFKAKLLQN-KDKPAIINVNIGTTVKGAVDD----LDLVIQTLE 261 (476)
Q Consensus 207 -------~v~~v~~~~~g-----~~D--------~~~Le~~l~~~-~~~p~~vv~t~gtt~tG~id~----l~~I~~ia~ 261 (476)
.+..+|..... .-| ++.|++.+... .+.+.+|++.-..++.|.+.| +++|.++|+
T Consensus 173 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~ 252 (460)
T PRK06541 173 PFEPLVPGGFRVPNTNFYRAPELGDDPEAFGRWAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICD 252 (460)
T ss_pred ccCCCCCCcEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHH
Confidence 13333322100 012 36788888643 234455555444788898888 999999999
Q ss_pred HhCCCCCceEEEEecCccccccccccc-CCCCCCcccccEEEEcCCCCCCCCC-CceeEEeehhhhhhhcCCc-cccCCC
Q 011842 262 ESGFTQDRFYIHCDGALFGLMMPFVKK-APKVSFKKPIGSVSVSGHKFVGCPM-PCGVQITRMEHINVLSSNV-EYLASR 338 (476)
Q Consensus 262 ~~g~~~~~~~lhvD~a~~g~~~~~~~~-~~~~~~~~~~Dsi~~s~hK~l~~p~-~~G~l~~~~~~~~~l~~~~-~yl~~~ 338 (476)
+||+ ++++|++|.|+--..... ...+.. ..|.++ +.|.++.++ ++|++++++++.+.+.... .++.
T Consensus 253 ~~g~-----llI~DEV~tGfGR~G~~~a~~~~gv--~PDivt--~gK~l~~G~~pigav~~~~~i~~~~~~~~~~~~~-- 321 (460)
T PRK06541 253 RYDV-----LLVSDEVICAFGRLGEMFGCERFGY--VPDIIT--CAKGITSGYSPLGAMIASDRLFEPFLDGPTMFLH-- 321 (460)
T ss_pred HcCC-----EEEEechhhCCCcCchhhhhhhcCC--CCCEEE--ecccccCCccceeEEEEcHHHHHHhhcCCCcccc--
Confidence 9999 999999995431111000 000111 268776 459998887 8999999998876654321 1111
Q ss_pred CCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcC---Ce-EeecCCeeEEE--EecCC------
Q 011842 339 DATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAG---IS-AMLNELSSTVV--FERPQ------ 406 (476)
Q Consensus 339 ~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g---~~-~~~~~~~~iv~--f~~~~------ 406 (476)
..|+.+ .++...++++.+..-.-++..++..++.++|.+.|++.. .. .+...+ .+.. |..+.
T Consensus 322 ~~T~~g-----np~~~aaala~l~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~v~~vrg~G-l~~~ie~~~~~~~~~~~ 395 (460)
T PRK06541 322 GYTFGG-----HPVSAAVALANLDIFEREGLLDHVRDNEPAFRATLEKLLDLPIVGDVRGDG-YFYGIELVKDKATKETF 395 (460)
T ss_pred CCCCCC-----CHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecc-eEEEEEEecCcccccCC
Confidence 112222 234444444333211112456778888899999998752 21 111222 2222 22110
Q ss_pred -cH--------HH-----hhceeecc---cCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 011842 407 -DE--------EF-----VRRWQLAC---QGNIAHVVVMPNVTIDKLDDFLNELIENRSTWY 451 (476)
Q Consensus 407 -~~--------~~-----~~~~~l~~---~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~ 451 (476)
.. .+ .+++.+.. ..+.+|++....+|++|||.++++|+++.++.+
T Consensus 396 ~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~g~~~lrl~Ppl~~t~~~id~~~~~l~~~l~~~~ 457 (460)
T PRK06541 396 TDDESERLLRGFLSPALFEAGLYCRADDRGDPVVQLAPPLISGQEEFDEIEQILRSVLTEAW 457 (460)
T ss_pred cchhhhhhHHHHHHHHHHhCCeEEEecCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 00 11 12233322 336889888888999999999999999988765
No 304
>PRK12403 putative aminotransferase; Provisional
Probab=99.57 E-value=7.7e-12 Score=130.97 Aligned_cols=295 Identities=13% Similarity=0.074 Sum_probs=167.8
Q ss_pred HHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhh-----CCCcEEEecCC--CchHHHHHHHHcCCe---
Q 011842 138 RQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREV-----FPDGILYASRE--SHYSVFKAARMYRME--- 207 (476)
Q Consensus 138 ~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~-----~p~~~Vl~s~~--~H~S~~~~~~~~G~~--- 207 (476)
.+.+.++.+.++++++-..+ ..+|+++||+||..|+.++|.. .++..++++.. -|.+...+..+.|..
T Consensus 97 ~~~~~~lae~L~~~~p~~~~--~v~f~~SGseA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~ 174 (460)
T PRK12403 97 HPAVIELSELLFSLLPGHYS--HAIYTNSGSEANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMH 174 (460)
T ss_pred CHHHHHHHHHHHHhCCCCcC--EEEEeCCcHHHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCcccc
Confidence 35667778888888763222 3899999999999999999854 23334443333 376665555554432
Q ss_pred --------EEEEeCCCC------------CccCHHHHHHHHHcC-CCCcEEEEEeeCCCccccccC----HHHHHHHHHH
Q 011842 208 --------CVKVDCLIS------------GEIDCADFKAKLLQN-KDKPAIINVNIGTTVKGAVDD----LDLVIQTLEE 262 (476)
Q Consensus 208 --------v~~v~~~~~------------g~~D~~~Le~~l~~~-~~~p~~vv~t~gtt~tG~id~----l~~I~~ia~~ 262 (476)
+..+|.... +..++++|++.+.+. .+....|++....+..|.+.| +++|.++|++
T Consensus 175 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~ 254 (460)
T PRK12403 175 EMGGLIPDVAHIDEPYWYANGGELTPAEFGRRAALQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQ 254 (460)
T ss_pred ccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHH
Confidence 233331100 011246677766532 234456666555777788877 9999999999
Q ss_pred hCCCCCceEEEEecCccccccccccc-C-CCCCCcccccEEEEcCCCCCCCCC-CceeEEeehhhhhhhcCC-ccccCCC
Q 011842 263 SGFTQDRFYIHCDGALFGLMMPFVKK-A-PKVSFKKPIGSVSVSGHKFVGCPM-PCGVQITRMEHINVLSSN-VEYLASR 338 (476)
Q Consensus 263 ~g~~~~~~~lhvD~a~~g~~~~~~~~-~-~~~~~~~~~Dsi~~s~hK~l~~p~-~~G~l~~~~~~~~~l~~~-~~yl~~~ 338 (476)
||+ ++++|+++.|+--. .+. . ..+.. ..|++++ .|.++.++ ++|.+++++++.+.+... ..|+.+
T Consensus 255 ~g~-----lLI~DEV~tGfGRt-G~~~a~e~~gv--~PDiv~~--gK~lggG~~Piga~v~~~~i~~~~~~~~~~~~~~- 323 (460)
T PRK12403 255 YDV-----LLCADEVIGGFGRT-GEWFAHEHFGF--EPDTLSI--AKGLTSGYVPMGGLVLSKRIAEALVEQGGVFAHG- 323 (460)
T ss_pred cCC-----EEEEeccccCCCcC-chhhhhhhcCC--CCCeEEE--cccccccccceEEEEECHHHHHHHhcCCCccccC-
Confidence 999 99999999764221 111 0 01111 2588874 59988785 899999998876655321 112111
Q ss_pred CCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHH-HHHHHHHHHHHh----cCCeE-eecCCee-EEEEecCC-----
Q 011842 339 DATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCL-RNAHYLKDRLLD----AGISA-MLNELSS-TVVFERPQ----- 406 (476)
Q Consensus 339 ~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~-~~a~~l~~~L~~----~g~~~-~~~~~~~-iv~f~~~~----- 406 (476)
.|+.+ .++...++++.+..-.-+..+++.. ++.++|++.|++ .+... +...+.. -+-|..+.
T Consensus 324 -~T~~g-----nPl~~Aaala~L~~i~~~~l~~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~gie~~~~~~~~~~ 397 (460)
T PRK12403 324 -LTYSG-----HPVAAAVAIANLKALRDEGVVTRVKDDTGPYLQRCLREVFGDHPLVGEVQGAGLVAALQFAEDKATRKR 397 (460)
T ss_pred -CCCCC-----CHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhcCCCEEeEeecceEEEEEEccCcccccc
Confidence 12222 2344444444332111123456664 677777777764 33221 1122221 12222111
Q ss_pred -cH--H---------HhhceeecccCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 011842 407 -DE--E---------FVRRWQLACQGNIAHVVVMPNVTIDKLDDFLNELIENRSTWY 451 (476)
Q Consensus 407 -~~--~---------~~~~~~l~~~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~ 451 (476)
.. . +.+++.+...++.+|++....+|++|||.++++|+++.+++.
T Consensus 398 ~~~~~~~~~~~~~~~~~~Gll~~~~~~~~~l~Ppl~it~~eid~~~~~l~~al~~~~ 454 (460)
T PRK12403 398 FANENDLAWRCRTIGFEEGVIIRSTLGRMIMAPALVAGRAEIDELVDKTRIAVDRTA 454 (460)
T ss_pred ccchhHHHHHHHHHHHhCCEEEEecCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 10 1 112333333345566655555699999999999999988764
No 305
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=99.57 E-value=5.1e-13 Score=136.57 Aligned_cols=302 Identities=19% Similarity=0.188 Sum_probs=208.9
Q ss_pred hhhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhh------CCCcEEEecCCCchHHHHHHHHcCCeE
Q 011842 135 VHSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREV------FPDGILYASRESHYSVFKAARMYRMEC 208 (476)
Q Consensus 135 ~~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~------~p~~~Vl~s~~~H~S~~~~~~~~G~~v 208 (476)
.+..++-.++.++++...|++.- .+--++|..+-+.++++.|.. ....+.+++..+|...-..+.++|+++
T Consensus 578 qGY~~lf~~Le~~Lc~iTG~D~~---s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNPASA~Magmkv 654 (1001)
T KOG2040|consen 578 QGYQQLFTELEKDLCEITGFDSF---SLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNPASAAMAGMKV 654 (1001)
T ss_pred hhHHHHHHHHHHHhheeecccce---eecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCChhhHHhcCCEE
Confidence 35667888899999999999841 344567777777777776653 123578899999999999999999999
Q ss_pred EEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCcccccc-CHHHHHHHHHHhCCCCCceEEEEecCcccccccccc
Q 011842 209 VKVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVD-DLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVK 287 (476)
Q Consensus 209 ~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id-~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~ 287 (476)
+.|.++.+|.+|+.+|++..+++.+.-..+.+|.|+|. |.++ .+++++++.++||- -+..|||---...-..
T Consensus 655 vpV~~~~~G~id~~dLk~kaekh~~~Laa~MvTYPST~-GvfE~~i~d~cd~iHehGG-----QVYlDGANMNAqVGlc- 727 (1001)
T KOG2040|consen 655 VPVGCDANGNIDMVDLKAKAEKHKDNLAALMVTYPSTH-GVFEEGIDDICDIIHEHGG-----QVYLDGANMNAQVGLC- 727 (1001)
T ss_pred EEeeccCCCCccHHHHHHHHHHhhhhhheeEEeccccc-ccccccHHHHHHHHHhcCC-----EEEecCCCccceeccc-
Confidence 99999999999999999999988777778889988876 6665 69999999999999 9999999421111000
Q ss_pred cCCCCCCcccccEEEEcCCCCCCCCC-----CceeEEeehhhhhhhcCCcc--ccCCCCCc--------ccCCCCChhHH
Q 011842 288 KAPKVSFKKPIGSVSVSGHKFVGCPM-----PCGVQITRMEHINVLSSNVE--YLASRDAT--------IMGSRNGHAPI 352 (476)
Q Consensus 288 ~~~~~~~~~~~Dsi~~s~hK~l~~p~-----~~G~l~~~~~~~~~l~~~~~--yl~~~~~~--------~~~sr~~~~~l 352 (476)
-.+.-++|+.-.+.||.+..|- +.|-+.++..+..-++.++- -....+.. ..||... ..
T Consensus 728 ----~pGd~GaDV~HLNLHKTFcIPHGGGGPg~gPIgVK~HLapfLP~HpVvs~~~~~~~~~~gsVsaaP~Gsa~I--Lp 801 (1001)
T KOG2040|consen 728 ----RPGDIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSPGRPEDTSPVGSVSAAPWGSALI--LP 801 (1001)
T ss_pred ----CCccccccceeecccceeeecCCCCCCCCCccchhhhccccCCCCCccCCCCCCCCCCccceeccCCCccee--eh
Confidence 0122348999999999887664 45556676655433332211 11111111 1222211 12
Q ss_pred HHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCe-----eEEEEe---cC---CcHHHhhc-----eee
Q 011842 353 FLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNELS-----STVVFE---RP---QDEEFVRR-----WQL 416 (476)
Q Consensus 353 ~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~-----~iv~f~---~~---~~~~~~~~-----~~l 416 (476)
-.|+.++.+|..|+++.-+-.+-+++|+.++|++.--.+...+.. +|+-.+ .. +..+..++ |+-
T Consensus 802 ISwaYikmMG~~GL~~as~~AiLNaNYMakRLe~hYkil~~~~~~~vaHEFIlD~r~fK~~agieavDvAKRL~DYgFHa 881 (1001)
T KOG2040|consen 802 ISWAYIKMMGSGGLKDASKIAILNANYMAKRLESHYKILFRGENGLVAHEFILDLRPFKKTAGIEAVDVAKRLMDYGFHA 881 (1001)
T ss_pred hHHHHHHHhcccccchhhHHHhhhhHHHHHHHhhccceeEecCCcceeeeeeeechhhccccCCcHHHHHHHHHhccCCC
Confidence 378999999999999998888999999999999864333434332 121111 10 01122222 222
Q ss_pred cc----cCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHh
Q 011842 417 AC----QGNIAHVVVMPNVTIDKLDDFLNELIENRSTWYE 452 (476)
Q Consensus 417 ~~----~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~~ 452 (476)
++ -.+.+.|-....-+++++|+|.++|..+++++.+
T Consensus 882 PTmswPV~gtLMIEPTESE~k~ElDRfcdAliSIreEI~~ 921 (1001)
T KOG2040|consen 882 PTMSWPVAGTLMIEPTESEDKAELDRFCDALISIREEIAQ 921 (1001)
T ss_pred CccccccCCceEeccCccccHHHHHHHHHHHHHHHHHHHH
Confidence 22 2367777777888999999999999999988755
No 306
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.56 E-value=7.9e-12 Score=130.24 Aligned_cols=291 Identities=14% Similarity=0.075 Sum_probs=173.2
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCC-chHHHHHHHHcCC-----------
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRES-HYSVFKAARMYRM----------- 206 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~-H~S~~~~~~~~G~----------- 206 (476)
+.+.++.+.+.++++...+ ..+|+++||+|+-.|+..+|....+..|+.-..+ |.....+....|.
T Consensus 84 ~~~~~la~~L~~~~p~~~~--~v~f~~sGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~ 161 (443)
T PRK08360 84 VEPLLLAEKLIEIAPGDNP--KVSFGLSGSDANDGAIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGEL 161 (443)
T ss_pred HHHHHHHHHHHHhCCCCCC--EEEEcCCHHHHHHHHHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCC
Confidence 5566777888887754322 4899999999999999999876445556654444 4322222222221
Q ss_pred -eEEEEeCCCCCc------------cCHHHHHHHHHcC--CCCcEEEEEeeCCCccccccC----HHHHHHHHHHhCCCC
Q 011842 207 -ECVKVDCLISGE------------IDCADFKAKLLQN--KDKPAIINVNIGTTVKGAVDD----LDLVIQTLEESGFTQ 267 (476)
Q Consensus 207 -~v~~v~~~~~g~------------~D~~~Le~~l~~~--~~~p~~vv~t~gtt~tG~id~----l~~I~~ia~~~g~~~ 267 (476)
.+..+|...... -+++.+++.++.. .+++..|++.-..+++|.+-| +++|.++|++||+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~-- 239 (443)
T PRK08360 162 SDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKFEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGI-- 239 (443)
T ss_pred CCcEEEeCCccccccccCchhhhHHHHHHHHHHHHHhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCC--
Confidence 133333321100 2345677777642 244566766644678887755 8999999999999
Q ss_pred CceEEEEecCcccccccccccCC--CCCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCC
Q 011842 268 DRFYIHCDGALFGLMMPFVKKAP--KVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGS 345 (476)
Q Consensus 268 ~~~~lhvD~a~~g~~~~~~~~~~--~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~s 345 (476)
++++|++|.++.... .... .+.. ..|.+++ .|.++.++++|+++.+.++.+.+... .+ ..++.+.
T Consensus 240 ---llI~DEv~~g~gr~G-~~~a~~~~~~--~pDiitl--sK~l~~G~pigav~~~~~i~~~~~~~-~~----~~T~~~~ 306 (443)
T PRK08360 240 ---LLVVDEVQSGLGRTG-KWFAIEHFGV--EPDIITL--GKPLGGGLPISATIGRAEIMDSLPPL-AH----AFTLSGN 306 (443)
T ss_pred ---EEEEeccccCCCcCc-cchhhhhcCC--CCCEEEe--cccccCCceeEEEEEcHHHHhhhcCC-CC----CCCCCcC
Confidence 999999998643321 1110 1111 2577665 69998889999999998877665321 11 1122222
Q ss_pred CCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhc----CCeEeecCCeeEEE--EecCC-----cH----HH
Q 011842 346 RNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDA----GISAMLNELSSTVV--FERPQ-----DE----EF 410 (476)
Q Consensus 346 r~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----g~~~~~~~~~~iv~--f~~~~-----~~----~~ 410 (476)
. .......++++.+..+ +..++..++.++|++.|++. +...-......++. |..+. +. .+
T Consensus 307 p--~~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrg~Gl~~gie~~~~~~~~~~~~~~~~~~ 381 (443)
T PRK08360 307 P--VASAAALAVIEEIEEK---NLLKRAEKLGNYTKKRLEEMKKKHELIGDVRGIGLMIGVDLVKDRETKERAYEEAAKV 381 (443)
T ss_pred H--HHHHHHHHHHHHHHHc---CHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEEecCCcccCccHHHHHHH
Confidence 1 1122233344443222 35677777888888887663 32211112222222 22111 11 11
Q ss_pred -----hhceeec-ccCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 011842 411 -----VRRWQLA-CQGNIAHVVVMPNVTIDKLDDFLNELIENRSTWY 451 (476)
Q Consensus 411 -----~~~~~l~-~~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~ 451 (476)
.+++.+. ..++.+|++....+|++|||.++++|+++.+.+.
T Consensus 382 ~~~l~~~Gi~~~~~~~~~lr~~P~l~~t~~~id~~~~~l~~~l~~~~ 428 (443)
T PRK08360 382 VWRAWELGLIVTFFSGNVLRIQPPLTIEKEVLDEGLDILEEAIEDVE 428 (443)
T ss_pred HHHHHHCCeEEeecCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 2333333 3468899999999999999999999999988764
No 307
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.56 E-value=1e-11 Score=128.16 Aligned_cols=285 Identities=15% Similarity=0.085 Sum_probs=165.7
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhC------C-CcEEEecCCC-chHHHHHHHHcCCe---
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVF------P-DGILYASRES-HYSVFKAARMYRME--- 207 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~------p-~~~Vl~s~~~-H~S~~~~~~~~G~~--- 207 (476)
+...++.+.+.++.+.. ...+|+++||+|+-.|+..+|... + +..|+.-+.+ |....-+....|-.
T Consensus 82 ~~~~~la~~L~~~~~~~---~~v~f~~sGseA~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~ 158 (408)
T PRK04612 82 APPLKLAEELVTASRFA---EKVFLCNSGTEANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQ 158 (408)
T ss_pred HHHHHHHHHHHhhCCCC---CEEEEcCchHHHHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccc
Confidence 44456677777765432 248999999999999999998641 1 3345554444 43333333222211
Q ss_pred ---------EEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccc-cC----HHHHHHHHHHhCCCCCceEEE
Q 011842 208 ---------CVKVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAV-DD----LDLVIQTLEESGFTQDRFYIH 273 (476)
Q Consensus 208 ---------v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~i-d~----l~~I~~ia~~~g~~~~~~~lh 273 (476)
+..+|.+ |++.|++.+..+ .+.+|++ .|...+|.+ .+ +++|.++|++||+ +++
T Consensus 159 ~~~~~~~~~~~~~~~~-----d~~~l~~~~~~~--~~aavi~-eP~~~~gg~~~~~~~~l~~l~~l~~~~g~-----llI 225 (408)
T PRK04612 159 EGYEPLPGGFRYVDFN-----DVEALEAAMAGG--DVAAVML-EPIQGEGGVMPAAPGFLARVRALCDQHDA-----LLV 225 (408)
T ss_pred cCCCCCCCCceEcCCC-----CHHHHHHhhCCC--CEEEEEE-CCccCCCCCcCCCHHHHHHHHHHHHHcCC-----EEE
Confidence 1222222 788999888532 2344444 454444544 32 8999999999999 999
Q ss_pred EecCcccccccccccCCCCCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHH
Q 011842 274 CDGALFGLMMPFVKKAPKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIF 353 (476)
Q Consensus 274 vD~a~~g~~~~~~~~~~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~ 353 (476)
+|++|.++.... ............|.+++ .|.++.++++|+++.++++.+.+.... ...++.++ ++.
T Consensus 226 ~DEv~tg~gr~G-~~~a~~~~~~~pdi~t~--~K~l~~G~piga~~~~~~~~~~~~~~~-----~~~t~~~~-----p~~ 292 (408)
T PRK04612 226 LDEIQCGMGRTG-TLFAHWQEQVTPDIVTL--AKALGGGFPIGAMLAGPKVAETMQFGA-----HGTTFGGN-----PLA 292 (408)
T ss_pred EeccccCCCcCC-chhhhhhcCCCCCEEEE--cchhcCCCceEEEEECHHHHhhhcCCC-----cCCCCCCC-----HHH
Confidence 999997643221 11000010112466655 598888899999999887765553211 11222222 233
Q ss_pred HHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhc----CCeEeecCCeeEEEEec-CC----cHHH-----hhceee-cc
Q 011842 354 LWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDA----GISAMLNELSSTVVFER-PQ----DEEF-----VRRWQL-AC 418 (476)
Q Consensus 354 ~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----g~~~~~~~~~~iv~f~~-~~----~~~~-----~~~~~l-~~ 418 (476)
+.++++.+..-.-++.+++..++.++|.++|++. ++.........++.+.. ++ ...+ .+++.+ +.
T Consensus 293 ~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~l~~l~~~~~~i~~vrg~Gl~~~i~~~~~~~~~a~~i~~~l~~~Gvlv~~~ 372 (408)
T PRK04612 293 AAVARVALRKLASPQIAANVARQSAALRAGLEALNAEFGVFAQVRGRGLMLGAVLAPAHAGQAGAILDLAAEHGLLLLQA 372 (408)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCCeeeeeccceEEEEEecCchhhHHHHHHHHHHHCCeEEeeC
Confidence 3333333311111356777888888888888774 22211222222222221 11 1122 233334 33
Q ss_pred cCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHh
Q 011842 419 QGNIAHVVVMPNVTIDKLDDFLNELIENRSTWYE 452 (476)
Q Consensus 419 ~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~~ 452 (476)
..+.+|++.+..+|++|||.+++.|+++.+++.+
T Consensus 373 g~~~lRl~Ppl~it~eeid~~l~~l~~~l~~~~~ 406 (408)
T PRK04612 373 GPDVLRFVPALNLTDAELADGLARLRLALADYVA 406 (408)
T ss_pred CCCEEEEcCCccCCHHHHHHHHHHHHHHHHHHhh
Confidence 4489999999999999999999999999877654
No 308
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.55 E-value=2.2e-12 Score=135.01 Aligned_cols=282 Identities=15% Similarity=0.067 Sum_probs=166.8
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHH-HHHHH--c-----------
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVF-KAARM--Y----------- 204 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~-~~~~~--~----------- 204 (476)
+.+.++.+.+.+.+.. . ....|+++||+|+..|++.+|....+..|+.-+.+|..+. ..... .
T Consensus 139 ~~~~~lAe~l~~~~p~-~--~~v~f~~SGsEA~e~AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~ 215 (474)
T PLN02482 139 LLENVLAEMVIDAVPS-V--EMVRFVNSGTEACMGVLRLARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSP 215 (474)
T ss_pred HHHHHHHHHHHHhCCC-C--CEEEEeCChHHHHHHHHHHHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCC
Confidence 6777888888887742 1 2489999999999999999997644555655444333322 11100 0
Q ss_pred CC------eEEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC----HHHHHHHHHHhCCCCCceEEEE
Q 011842 205 RM------ECVKVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD----LDLVIQTLEESGFTQDRFYIHC 274 (476)
Q Consensus 205 G~------~v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~----l~~I~~ia~~~g~~~~~~~lhv 274 (476)
|. .+..+|.+ |+++|++.|.++......|++.-..++.|.+.| +++|.++|++||+ ++++
T Consensus 216 g~~~~~~~~~~~~~~n-----d~~~l~~~l~~~~~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~-----lLI~ 285 (474)
T PLN02482 216 GVPKAATSATLTAPYN-----DLEAVKKLFEANKGEIAAVILEPVVGNSGFIVPKKEFLEGLREITKENGA-----LLVF 285 (474)
T ss_pred CCCCCCCCCeEEecCC-----ChHHHHHHHHhCCCceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCC-----EEEE
Confidence 11 12233333 789999999866555566766655777788766 5689999999999 9999
Q ss_pred ecCcccccccccccCCC-CCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHH
Q 011842 275 DGALFGLMMPFVKKAPK-VSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIF 353 (476)
Q Consensus 275 D~a~~g~~~~~~~~~~~-~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~ 353 (476)
|+++.|+-. ....... +.. ..|.+++ .|.++.++++|.++.++++++.+.....++. ..|+.+ .++.
T Consensus 286 DEV~tGfR~-g~~ga~~~~gv--~PDi~t~--gK~lggG~Pigav~g~~ei~~~~~~~~~~~~--~~T~~g-----npl~ 353 (474)
T PLN02482 286 DEVMTGFRI-AYGGAQEYFGI--TPDLTTL--GKVIGGGLPVGAYGGRREIMEMVAPAGPMYQ--AGTLSG-----NPLA 353 (474)
T ss_pred eccccCeec-CcchHhHHhCC--CCCEEEe--cchhhCCCceEEEEEcHHHHHhhccCCCccc--ccCcch-----hHHH
Confidence 999976522 1111100 111 2687665 5999888999999999888776642111111 112222 2333
Q ss_pred HH---HHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcC----CeEeecCCeeE--EEEecCC----------cHHHh---
Q 011842 354 LW---YTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAG----ISAMLNELSST--VVFERPQ----------DEEFV--- 411 (476)
Q Consensus 354 ~~---~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g----~~~~~~~~~~i--v~f~~~~----------~~~~~--- 411 (476)
.. ++|+.+.. ++..++..++.++|+++|++.. ...+......+ +.|..+. +....
T Consensus 354 ~aAala~L~~l~~---~~~~~~~~~~g~~l~~~L~~l~~~~g~~~~~~~v~g~~gi~f~~~~~~~~~~~~~~d~~~~~~~ 430 (474)
T PLN02482 354 MTAGIHTLKRLQQ---PGTYEYLDKITKKLIQGILEAGKKAGHEMCGGYISGMFGFFFTEGPVYNFADAKKSDTAKFARF 430 (474)
T ss_pred HHHHHHHHHHHhc---cCHHHHHHHHHHHHHHHHHHHHHhcCCCEEEcccceEEEEEEecCCccChhhhccCCHHHHHHH
Confidence 33 33444422 3467777888888888887742 22222222222 2232211 11111
Q ss_pred ------hceeecccCCEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Q 011842 412 ------RRWQLACQGNIAHVVVMPNVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 412 ------~~~~l~~~~~~lRv~~~~~~T~edid~~~~~l~~~~~~ 449 (476)
+++.+...+...+ .++..+|++|||+++++++++.++
T Consensus 431 ~~~l~~~Gv~~~~~~~~~~-~psl~ht~~dId~~l~al~~~l~~ 473 (474)
T PLN02482 431 HRGMLEEGVYLAPSQFEAG-FTSLAHTEEDIDFTIAAAERVLAR 473 (474)
T ss_pred HHHHHHCCeEEeccCCCCC-cCCCCCCHHHHHHHHHHHHHHHHh
Confidence 1111211110001 256778999999999999998764
No 309
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.55 E-value=1.3e-11 Score=128.15 Aligned_cols=280 Identities=17% Similarity=0.107 Sum_probs=169.3
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhC---CCcEEEecCCC-chHHHHHHHHcCC--------
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVF---PDGILYASRES-HYSVFKAARMYRM-------- 206 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~---p~~~Vl~s~~~-H~S~~~~~~~~G~-------- 206 (476)
+...++.+.+++++.-+. ...+|+++||+||-.|++.+|... .+..|++.+.+ |....-+....+-
T Consensus 117 ~~~~~lAe~L~~~~p~~~--~~v~f~~SGsEA~e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~ 194 (442)
T TIGR03372 117 PLRALLAKTLAALTPGKL--KYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFM 194 (442)
T ss_pred HHHHHHHHHHHHhCCCCc--CEEEEeCCchHHHHHHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCC
Confidence 556677788888764322 248899999999999999998752 33455555544 4333222222111
Q ss_pred ----eEEEEeCCCCCccCHHHHHHHHHc---CCCCcEEEEEeeCCCccccccC----HHHHHHHHHHhCCCCCceEEEEe
Q 011842 207 ----ECVKVDCLISGEIDCADFKAKLLQ---NKDKPAIINVNIGTTVKGAVDD----LDLVIQTLEESGFTQDRFYIHCD 275 (476)
Q Consensus 207 ----~v~~v~~~~~g~~D~~~Le~~l~~---~~~~p~~vv~t~gtt~tG~id~----l~~I~~ia~~~g~~~~~~~lhvD 275 (476)
.+..+|.+ |.+.+++.+++ .......|++....+.-|.+.| +++|.++|++||+ ++++|
T Consensus 195 p~~~~~~~~p~~-----d~~~~~~~l~~~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~-----llI~D 264 (442)
T TIGR03372 195 PLLPGFHHVAFG-----DIEAMLKALNECKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGA-----LLILD 264 (442)
T ss_pred CCCCCCEEeCCC-----CHHHHHHHHHHHhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCC-----EEEEe
Confidence 23444443 67888887753 2344566777666777888888 9999999999999 99999
Q ss_pred cCccccccccccc-C-CCCCCcccccEEEEcCCCCCCCC-CCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHH
Q 011842 276 GALFGLMMPFVKK-A-PKVSFKKPIGSVSVSGHKFVGCP-MPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPI 352 (476)
Q Consensus 276 ~a~~g~~~~~~~~-~-~~~~~~~~~Dsi~~s~hK~l~~p-~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l 352 (476)
+++.|+-- ..+. . ..+.. ..|++++ .|.++.+ .++|.+++++++.+.+... .+..+ .|+.+. ++
T Consensus 265 EV~tG~GR-tG~~~a~e~~gv--~PDivt~--gK~lg~G~~Pigavv~~~~i~~~~~~~-~~~~~--~T~~gn-----p~ 331 (442)
T TIGR03372 265 EVQTGMGR-TGKMFACEHEGV--QPDILCL--AKALGGGVMPIGATIATEAVFSVLFDN-PFLHT--TTFGGN-----PL 331 (442)
T ss_pred ecccCCCc-cccchhhhhcCC--CCCeeee--hhhhcCCcccceEEEecHHHHHhhhcc-Ccccc--CCCCCC-----HH
Confidence 99965311 1111 0 00111 2688774 5998877 5799999998876655311 12211 223322 33
Q ss_pred HHHH---HHHHhChhcHHHHHHHHHHHHHHHHHHHHhc----C-CeEeecCCeeEEEEecCCc---HHH-----hhceee
Q 011842 353 FLWY---TLNRKGYKGFQKEVQKCLRNAHYLKDRLLDA----G-ISAMLNELSSTVVFERPQD---EEF-----VRRWQL 416 (476)
Q Consensus 353 ~~~~---~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----g-~~~~~~~~~~iv~f~~~~~---~~~-----~~~~~l 416 (476)
...+ +|+.+..+ +..++..++.++|++.|++. + ...-......++.+...++ ..+ .+++.+
T Consensus 332 ~~Aaa~a~L~~i~~~---~l~~~~~~~G~~l~~~L~~l~~~~~~~i~~vRG~Gl~~giel~~~~~~~~i~~~l~~~Gvl~ 408 (442)
T TIGR03372 332 ACAAALATINELLEK---NLPAQAAIKGDFLLDGFQQLAAEYPDLIIEARGKGLLMAIEFRDNEIGYAFAKELFQQNILV 408 (442)
T ss_pred HHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecceEEEEEEeCChHHHHHHHHHHHHCCcEE
Confidence 3333 34444322 34566677778888887764 2 1111112233333433222 112 233444
Q ss_pred cc---cCCEEEEEEcCCCCHHHHHHHHHHHHHH
Q 011842 417 AC---QGNIAHVVVMPNVTIDKLDDFLNELIEN 446 (476)
Q Consensus 417 ~~---~~~~lRv~~~~~~T~edid~~~~~l~~~ 446 (476)
.. .++.+|+.....+|++|||+++++|+++
T Consensus 409 ~~~~~~~~~lr~~Ppl~~t~~~id~~~~~l~~~ 441 (442)
T TIGR03372 409 AGTLNNAKSIRIEPPLTITIEQCALVIKAAKDA 441 (442)
T ss_pred eecCCCCCEEEEECCcccCHHHHHHHHHHHHHh
Confidence 32 2478999999999999999999999875
No 310
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.55 E-value=1e-11 Score=131.01 Aligned_cols=297 Identities=13% Similarity=0.082 Sum_probs=172.0
Q ss_pred HHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhC-------CCcEEEecCCCchHHHHHHHHcCCe---
Q 011842 138 RQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVF-------PDGILYASRESHYSVFKAARMYRME--- 207 (476)
Q Consensus 138 ~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~-------p~~~Vl~s~~~H~S~~~~~~~~G~~--- 207 (476)
.+.+.++.+.|.+++.-. +....+|+++|++||..|+.++|... +..+|......|.+...+..+.|..
T Consensus 132 ~~~~~~lae~L~~~~~~~-~~~~v~f~~SGsEA~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~ 210 (504)
T PLN02760 132 TKPSLDLAKELLEMFTAR-KMGKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALH 210 (504)
T ss_pred cHHHHHHHHHHHhhcCCC-CCCEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhc
Confidence 356667777777765321 11247899999999999999997531 2345666666777765555544431
Q ss_pred ---------EEEEeCCCCC-------------ccCHHHHHHHHHc-CCCCcEEEEEeeCCCccccccC----HHHHHHHH
Q 011842 208 ---------CVKVDCLISG-------------EIDCADFKAKLLQ-NKDKPAIINVNIGTTVKGAVDD----LDLVIQTL 260 (476)
Q Consensus 208 ---------v~~v~~~~~g-------------~~D~~~Le~~l~~-~~~~p~~vv~t~gtt~tG~id~----l~~I~~ia 260 (476)
+..++..... ....++|++.+.. ..+.+..|++.......|.+.| +++|.++|
T Consensus 211 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc 290 (504)
T PLN02760 211 QKFDLPAPFVLHTDCPHYWRFHLPGETEEEFSTRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVL 290 (504)
T ss_pred cCCCCCCCCcEEeCCCcccccCCCCCcHHHHHHHHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHH
Confidence 1122221100 1123567877753 2344556666555777788888 99999999
Q ss_pred HHhCCCCCceEEEEecCcccccccccccC-CCCCCcccccEEEEcCCCCCCCCC-CceeEEeehhhhhhhcCCcccc--C
Q 011842 261 EESGFTQDRFYIHCDGALFGLMMPFVKKA-PKVSFKKPIGSVSVSGHKFVGCPM-PCGVQITRMEHINVLSSNVEYL--A 336 (476)
Q Consensus 261 ~~~g~~~~~~~lhvD~a~~g~~~~~~~~~-~~~~~~~~~Dsi~~s~hK~l~~p~-~~G~l~~~~~~~~~l~~~~~yl--~ 336 (476)
++||+ ++++|+++.|+--.+.-.. ..+.+ ..|.++++ |.++.++ ++|.+++++++.+.+....... .
T Consensus 291 ~~~g~-----lLI~DEV~TGfGRtG~~~a~e~~gv--~PDivtlg--K~lggG~~PigAv~~~~~i~d~~~~~~~~~~~~ 361 (504)
T PLN02760 291 KKYDI-----LFIADEVICAFGRLGTMFGCDKYNI--KPDLVSLA--KALSSAYMPIGAVLVSPEISDVIHSQSNKLGSF 361 (504)
T ss_pred HHcCC-----EEEecchhhCCcccchhhHHHhcCC--CCcEEEec--ccccCCccccceEeecHHHHhhhhcccccccCc
Confidence 99999 9999999955411111000 01111 27876664 9888764 7889999988776553211100 0
Q ss_pred CCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhc---CCeE-eecCCeeEEEEe--cCCc---
Q 011842 337 SRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDA---GISA-MLNELSSTVVFE--RPQD--- 407 (476)
Q Consensus 337 ~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~---g~~~-~~~~~~~iv~f~--~~~~--- 407 (476)
....|+.+. ++...++++.+..-.-++.+++..++.++|++.|++. ++.. +...+ .++.+. .+..
T Consensus 362 ~h~~T~~gn-----Pl~~Aaala~Le~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~G-l~~gie~~~~~~~~~ 435 (504)
T PLN02760 362 AHGFTYSGH-----PVSCAVALEALKIYKERNIPEHVNKIAPRFQDGIKAFSGSPIIGEIRGTG-LILGTEFVDNKSPND 435 (504)
T ss_pred ccCCCCCCC-----HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhcCCCeeeEEeCc-eEEEEEEecCCcccc
Confidence 011223332 3444444443321111356778888888898888764 2111 11111 222222 1110
Q ss_pred -----HH----H-----hhceeecccCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 011842 408 -----EE----F-----VRRWQLACQGNIAHVVVMPNVTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 408 -----~~----~-----~~~~~l~~~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~ 450 (476)
.. + .+++.+...++.+|++....+|++|||.++++|+++.+.+
T Consensus 436 ~~~~~~~~~~~i~~~~~~~Gvl~~~~g~~lrl~Ppl~it~eeid~~~~~l~~al~~~ 492 (504)
T PLN02760 436 PFPAEWGVGAYFGAECKKRGMLVRVAGDNIMMSPPLIITPEEVDELISIYGKALKAT 492 (504)
T ss_pred cccchhHHHHHHHHHHHhCCcEEEecCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 01 1 1233333345677887777799999999999999987765
No 311
>PRK06062 hypothetical protein; Provisional
Probab=99.53 E-value=2e-11 Score=127.50 Aligned_cols=293 Identities=16% Similarity=0.026 Sum_probs=167.7
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCC-chHHHHHHHHcCC-----------
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRES-HYSVFKAARMYRM----------- 206 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~-H~S~~~~~~~~G~----------- 206 (476)
+...++.+.+.++..-+. ...+|+++||+|+-.|++.+|....+..|+.-+.+ |.....+....+-
T Consensus 95 ~~~~~lae~L~~~~p~~~--~~v~f~~SGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~ 172 (451)
T PRK06062 95 DARSEAARLIAERAPGDL--SKVFFTNGGADANEHAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRA 172 (451)
T ss_pred HHHHHHHHHHHHhCCCCC--CEEEEcCChHHHHHHHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCC
Confidence 556677777888764222 24899999999999999999975444556555544 4332233222221
Q ss_pred eEEEEeCCCCCc------cC-------HHHHHHHHHcC-CCCcEEEEEeeCCCccccccC----HHHHHHHHHHhCCCCC
Q 011842 207 ECVKVDCLISGE------ID-------CADFKAKLLQN-KDKPAIINVNIGTTVKGAVDD----LDLVIQTLEESGFTQD 268 (476)
Q Consensus 207 ~v~~v~~~~~g~------~D-------~~~Le~~l~~~-~~~p~~vv~t~gtt~tG~id~----l~~I~~ia~~~g~~~~ 268 (476)
.+..++...... -| +++|++.|+.. .+.+..|++.-....-|.+.| +++|.++|++||+
T Consensus 173 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~--- 249 (451)
T PRK06062 173 GVVHFFGPFLYRSEFHATTEEEECERALAHLERVIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGI--- 249 (451)
T ss_pred CCEEeCCCCccccccCCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCC---
Confidence 122222211111 12 67888888643 244556766655777788888 9999999999999
Q ss_pred ceEEEEecCcccccccccccC-CCCCCcccccEEEEcCCCCCCCCC-CceeEEeehhhhhhhcCCccccCCCCCcccCCC
Q 011842 269 RFYIHCDGALFGLMMPFVKKA-PKVSFKKPIGSVSVSGHKFVGCPM-PCGVQITRMEHINVLSSNVEYLASRDATIMGSR 346 (476)
Q Consensus 269 ~~~lhvD~a~~g~~~~~~~~~-~~~~~~~~~Dsi~~s~hK~l~~p~-~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr 346 (476)
++++|+++.|+--...-.. ..+.+ ..|.+++ .|.++.++ ++|.++.++++.+.+... .|. ...|+.+.+
T Consensus 250 --lLI~DEV~tGfGRtG~~~a~~~~gv--~PDi~t~--gK~lggG~~Pigav~~~~~i~~~~~~~-~~~--~~~T~~gnp 320 (451)
T PRK06062 250 --VLIADEVMAGFGRTGKWFAIEHFGV--VPDLITF--AKGVNSGYVPLGGVAISEAIAATFADR-PYP--GGLTYSGHP 320 (451)
T ss_pred --EEEeeccccCCCcCcHHHHHHhcCC--CCCeeee--chhhhcCCcCcEEEEEcHHHHHHhccC-CCC--CCCCCCCCH
Confidence 9999999987421110000 01111 2687765 49998875 899999998877666321 111 112333321
Q ss_pred CChhHHHHHHHHHHhChhcHHHHHHHHHHHH-HHHHHHHHhc----CCe-EeecCCe-eEEEEecCC-------c-----
Q 011842 347 NGHAPIFLWYTLNRKGYKGFQKEVQKCLRNA-HYLKDRLLDA----GIS-AMLNELS-STVVFERPQ-------D----- 407 (476)
Q Consensus 347 ~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a-~~l~~~L~~~----g~~-~~~~~~~-~iv~f~~~~-------~----- 407 (476)
.......++|+.+..+. .+++..++. ++|.+.|++. +.. .+...+. .-+-|..+. .
T Consensus 321 --l~~Aaa~a~L~~l~~~~---l~~~~~~~G~~~l~~~L~~l~~~~~~v~~vrG~Gl~~gve~~~~~~~~~~~~~~~~~~ 395 (451)
T PRK06062 321 --LACAAAVATINAMEEEG---IVENAARIGAEVLGPGLRELAERHPSVGEVRGLGVFWALELVADRETREPLAPYGASS 395 (451)
T ss_pred --HHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHHhcCCcEEeEeccccEEEEEEcccccccCCCcccchhh
Confidence 11222333444443333 455555554 4666666553 321 1112222 112222110 0
Q ss_pred ---HHH-----hhceeecccCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 011842 408 ---EEF-----VRRWQLACQGNIAHVVVMPNVTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 408 ---~~~-----~~~~~l~~~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~ 450 (476)
..+ .+++.+...++.+|++....+|++|||.++++|+++.+.+
T Consensus 396 ~~~~~~~~~l~~~Gvl~~~~~~~lrl~ppl~~t~~eid~~~~~l~~~l~~~ 446 (451)
T PRK06062 396 AAMAAVKAACKERGLLPFVNGNRIHVVPPCTVTEDEVREGLAILDAALAVA 446 (451)
T ss_pred HHHHHHHHHHHHCCcEEeecCCEEEEECCccCCHHHHHHHHHHHHHHHHHh
Confidence 011 1222232345778887777899999999999999988764
No 312
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.53 E-value=1.8e-11 Score=127.70 Aligned_cols=299 Identities=16% Similarity=0.104 Sum_probs=174.7
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEe-cCCCchHHHHHHHHcCC-----------
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYA-SRESHYSVFKAARMYRM----------- 206 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~-s~~~H~S~~~~~~~~G~----------- 206 (476)
+.+.++.+.+++++.-.. ....+|+++||+||..|+..+|....+..|+. ....|.....+..+.+.
T Consensus 85 ~~~~~lae~L~~~~p~~~-~~~v~f~~SGseA~e~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~ 163 (445)
T PRK08593 85 EPLVRLAKKLCELAPGDF-EKRVTFGLSGSDANDGIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPL 163 (445)
T ss_pred HHHHHHHHHHHHhCCCCC-CCEEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCC
Confidence 556677778888764221 12489999999999999999987533444544 44455444333333221
Q ss_pred --eEEEEeCCCC-----CccC-------HHHHHHHHHcC--CCCcEEEEEeeCCCccccccC----HHHHHHHHHHhCCC
Q 011842 207 --ECVKVDCLIS-----GEID-------CADFKAKLLQN--KDKPAIINVNIGTTVKGAVDD----LDLVIQTLEESGFT 266 (476)
Q Consensus 207 --~v~~v~~~~~-----g~~D-------~~~Le~~l~~~--~~~p~~vv~t~gtt~tG~id~----l~~I~~ia~~~g~~ 266 (476)
.+..+|.... ...+ ++.+++.+... ......|++....+..|.+.| +++|.++|++||+
T Consensus 164 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~- 242 (445)
T PRK08593 164 LPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGI- 242 (445)
T ss_pred CCCcEEeCCCccccccccCCcHHHHHHHHHHHHHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCC-
Confidence 2334443211 0111 24455555432 234556767655667787766 9999999999999
Q ss_pred CCceEEEEecCccccccccccc-C-CCCCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccC
Q 011842 267 QDRFYIHCDGALFGLMMPFVKK-A-PKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMG 344 (476)
Q Consensus 267 ~~~~~lhvD~a~~g~~~~~~~~-~-~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~ 344 (476)
++++|+++.|+-.. ... . ..+.. ..|++++ .|.++.++++|+++.++++.+.+... .+. .|+.+
T Consensus 243 ----llI~DEv~tg~Grt-G~~~a~~~~gv--~pDi~t~--gK~l~~G~p~gav~~~~~i~~~~~~~-~~~----~T~~~ 308 (445)
T PRK08593 243 ----LFAVDDIQQGLGRT-GKWSSISHFNI--TPDLMSF--GKSLAGGMPMSAIVGRKEIMESLEAP-AHL----FTTGA 308 (445)
T ss_pred ----EEEEechhhCCCcC-chHHHHHhcCC--CCCEeee--cccccCCcccEEEEEcHHHHhhhccC-CCC----CCCCC
Confidence 99999999654211 111 0 00111 2577754 58888778899999998887665321 111 12222
Q ss_pred CCCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhc----CCeE-eecCCeeE-EEEecC-----CcH----H
Q 011842 345 SRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDA----GISA-MLNELSST-VVFERP-----QDE----E 409 (476)
Q Consensus 345 sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----g~~~-~~~~~~~i-v~f~~~-----~~~----~ 409 (476)
.+ ....+..++++.+.. ++.+++..++.++|++.|++. +... +...+..+ +-|..+ .+. .
T Consensus 309 ~p--l~~aaa~a~l~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl~~gi~l~~~~~~~~~~~~~~~~ 383 (445)
T PRK08593 309 NP--VSCAAALATIDMIED---ESLLQRSAEKGEYARKRFDQWVSKYNFVGDVRGYGLSIGIDIVSDKKLKTRDNEAALK 383 (445)
T ss_pred CH--HHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhcCCcEEEEeccceEEEEEEecCCCcCCCcHHHHHH
Confidence 11 112223334444322 346677777888888888763 3211 11111111 112111 011 1
Q ss_pred H-----hhceeec-ccCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 011842 410 F-----VRRWQLA-CQGNIAHVVVMPNVTIDKLDDFLNELIENRSTWYEDGKRQP 458 (476)
Q Consensus 410 ~-----~~~~~l~-~~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~~~~~~~~ 458 (476)
+ .+++.+. ..++.+|+.....+|++|||.++++|.++.+.+.+..-.||
T Consensus 384 ~~~~~~~~Gv~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~~~~~~~~~ 438 (445)
T PRK08593 384 ICNYCFEHGVVIIAVAGNVLRFQPPLVITYEQLDTALNTIEQAFTALEAGKLDQP 438 (445)
T ss_pred HHHHHHHCCeEEeccCCCEEEEECCCccCHHHHHHHHHHHHHHHHHHhccccCCh
Confidence 1 1233332 24578999999999999999999999999998877666666
No 313
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.53 E-value=3.1e-11 Score=125.78 Aligned_cols=290 Identities=16% Similarity=0.079 Sum_probs=169.2
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchH-HHHHHHHcCC-----------
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYS-VFKAARMYRM----------- 206 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S-~~~~~~~~G~----------- 206 (476)
+.+.++.+.+.+++.-+. ....+|+++||+|+..|++.+|....+..|+.-+.+|.. ..-+..+.+-
T Consensus 97 ~~~~~lAe~L~~~~p~~~-~~~v~f~~SGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~ 175 (441)
T PRK05769 97 EPAVELAERLVEIAPGGF-EKKVFFTNSGTESNEAAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPL 175 (441)
T ss_pred HHHHHHHHHHHHhCCCCC-CCEEEECCchHHHHHHHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCC
Confidence 556678888888774211 124899999999999999999976444556655544433 2222222221
Q ss_pred --eEEEEeCCCCCc-------------cCHHHHHHHH-Hc--CCCCcEEEEEeeCCCccccccC----HHHHHHHHHHhC
Q 011842 207 --ECVKVDCLISGE-------------IDCADFKAKL-LQ--NKDKPAIINVNIGTTVKGAVDD----LDLVIQTLEESG 264 (476)
Q Consensus 207 --~v~~v~~~~~g~-------------~D~~~Le~~l-~~--~~~~p~~vv~t~gtt~tG~id~----l~~I~~ia~~~g 264 (476)
.+..+|...... -+++.+++.+ ++ .......|++.-..+..|.+.| +++|.++|++||
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g 255 (441)
T PRK05769 176 MPGVIHVPYPNPYRNPWGIENPEECGNAVLDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYG 255 (441)
T ss_pred CCCeEEeCCCccccccccCCchHHHHHHHHHHHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcC
Confidence 233344321100 1234466633 32 2344566666655777888888 999999999999
Q ss_pred CCCCceEEEEecCcccccccccccCCCCCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccC
Q 011842 265 FTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMG 344 (476)
Q Consensus 265 ~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~ 344 (476)
+ ++++|+++.|+... ..........-..|.++++ |.++.++++|+++.+++....+.. . ...++.+
T Consensus 256 ~-----lli~DEv~tG~gr~-G~~~a~~~~gv~pDivt~~--K~l~~G~p~gav~~~~~i~~~~~~---~---~~~T~~g 321 (441)
T PRK05769 256 I-----LLIDDEVQTGMGRT-GKMFAIEHFGVEPDIITLA--KAIAGGLPLGAVIGRAELMFLPPG---S---HANTFGG 321 (441)
T ss_pred C-----EEEEechhhCCCcc-cceehhhccCCCCCEEEEc--ccccCCcccEEEEEehhhhhcCCC---C---CCCCCCc
Confidence 9 99999999864221 1110000111125887754 888878999999998876532211 1 1122322
Q ss_pred CCCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhc----CCeEeecCCeeEEE--EecCC---cHH----H-
Q 011842 345 SRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDA----GISAMLNELSSTVV--FERPQ---DEE----F- 410 (476)
Q Consensus 345 sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----g~~~~~~~~~~iv~--f~~~~---~~~----~- 410 (476)
.++.+.++++.+..-.- +..++..++.++|++.|++. +...-......++. |..+. +.. +
T Consensus 322 -----~p~~~aaa~a~L~~l~~-~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~~~~~~~~~~~~~ 395 (441)
T PRK05769 322 -----NPVAAAAALATLEELEE-GLLENAQKLGEYLRKELKELKEKYEFIGDVRGLGLMIGVELVKDRKEPDPKLRDKVL 395 (441)
T ss_pred -----CHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCCCeeeeecceEEEEEEeccCCccccHHHHHHHH
Confidence 23444444444321111 66778888889999988764 22111111122222 22110 111 1
Q ss_pred ----hhceeec-ccCCEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Q 011842 411 ----VRRWQLA-CQGNIAHVVVMPNVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 411 ----~~~~~l~-~~~~~lRv~~~~~~T~edid~~~~~l~~~~~~ 449 (476)
.+++.+. ...+.+|++....+|++|||.++++|+++.+.
T Consensus 396 ~~~~~~Gil~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 439 (441)
T PRK05769 396 YEAFKRGLLLLGAGKSAIRIIPPLIITEEEADIGLEILEEAIKE 439 (441)
T ss_pred HHHHhCCcEEecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 2333333 33478899888889999999999999998764
No 314
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.53 E-value=5.5e-12 Score=130.78 Aligned_cols=288 Identities=14% Similarity=0.099 Sum_probs=163.4
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHH----HHHHHcCCe-------
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVF----KAARMYRME------- 207 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~----~~~~~~G~~------- 207 (476)
+.+.++.+.+.++++... ....|+++||+|+..|++.+|....+..|+.-..+|..+. .+....+-.
T Consensus 93 ~~~~~la~~L~~~~~~~~--~~v~f~~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~ 170 (433)
T PRK00615 93 EQEILFAEELFSYLGLED--HKIRFVSSGTEATMTAVRLARGITGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHL 170 (433)
T ss_pred HHHHHHHHHHHHhCCCCc--CEEEEeCchHHHHHHHHHHHHHhhCCCEEEEEcCccCCCCcccCcccccCCCCcCcCCCC
Confidence 556677788888775432 2489999999999999999997544455554444333321 111111100
Q ss_pred ---------EEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC----HHHHHHHHHHhCCCCCceEEEE
Q 011842 208 ---------CVKVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD----LDLVIQTLEESGFTQDRFYIHC 274 (476)
Q Consensus 208 ---------v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~----l~~I~~ia~~~g~~~~~~~lhv 274 (476)
...++. -|+++|++.+.+...++..|++....++.|.+.| +++|.++|++||+ ++++
T Consensus 171 ~~~~~~~~~~~~~~~-----~d~~~l~~~l~~~~~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~-----llI~ 240 (433)
T PRK00615 171 VDTDLAHPLTLSLPY-----NDFQIFQTVMNSLGHRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGS-----LSIM 240 (433)
T ss_pred CCCCCCCCCeEeCCC-----CCHHHHHHHHHhcCCceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCC-----EEEE
Confidence 011111 2789999999765555567777666778888877 4599999999999 9999
Q ss_pred ecCcccccccccccCC-CCCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCc-cccCCCCCcccCCCCChhHH
Q 011842 275 DGALFGLMMPFVKKAP-KVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNV-EYLASRDATIMGSRNGHAPI 352 (476)
Q Consensus 275 D~a~~g~~~~~~~~~~-~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~-~yl~~~~~~~~~sr~~~~~l 352 (476)
|+++.|+ .-...... .+.. ..|.+++ .|.++.+.++|++++++++.+.+.... .|.. .|+.+ .++
T Consensus 241 DEv~tG~-R~G~~ga~~~~gv--~PDi~~~--gK~lggG~p~~av~~~~~i~~~~~~~~~~~~~---~T~~g-----~p~ 307 (433)
T PRK00615 241 DEVVTGF-RVAQGGAAAIYHV--KPDITVY--GKILGGGLPAAAVVAHKSIMDHLAPEGTIFQA---GTLSG-----NPL 307 (433)
T ss_pred Ecccccc-cccHhHHHHhcCC--CCCeEEE--cccccCCcceeeeeecHHHHhhhcCCCCcccC---CCCcc-----cHH
Confidence 9999654 11111100 1111 2677764 698887788999999998876653211 1111 11121 233
Q ss_pred HHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHh----cCCeEe-ecCCe-eEEEEecCC----------cHHHhhceee
Q 011842 353 FLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLD----AGISAM-LNELS-STVVFERPQ----------DEEFVRRWQL 416 (476)
Q Consensus 353 ~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~g~~~~-~~~~~-~iv~f~~~~----------~~~~~~~~~l 416 (476)
...++++.+..-.-++.+++..++.++|.++|++ .|+... ...+. .-+.|.... +.+....+..
T Consensus 308 ~~aa~la~L~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~g~~v~~~r~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (433)
T PRK00615 308 AMAAGKASINLCREQGFYTQLSTLEQNFLSPIEEMIRSQGFPVSLVRYGSMFSFFFNENRPNNLAEAQLSDIEAFQTFYQ 387 (433)
T ss_pred HHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeeceEEEEEEeCCCCCChHHHhhCCHHHHHHHHH
Confidence 3333333332111123566777777777666654 344221 11111 112232111 1111111110
Q ss_pred c--ccCCEE------EEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 011842 417 A--CQGNIA------HVVVMPNVTIDKLDDFLNELIENRSTWY 451 (476)
Q Consensus 417 ~--~~~~~l------Rv~~~~~~T~edid~~~~~l~~~~~~~~ 451 (476)
. ..+-.+ ...++..+|++|||+++++++++.+..+
T Consensus 388 ~l~~~Gv~~~~~~~~~~~ls~~ht~~did~~~~a~~~~~~~~~ 430 (433)
T PRK00615 388 SAFSKGVYLSPSPFEASFLSSAHSMENLDYAQNVLIDSLEKVF 430 (433)
T ss_pred HHHHCCeeecCccccccceecCCCHHHHHHHHHHHHHHHHHHh
Confidence 0 111111 1257888899999999999999887654
No 315
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.53 E-value=6.9e-12 Score=126.46 Aligned_cols=265 Identities=15% Similarity=0.214 Sum_probs=184.0
Q ss_pred HHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHH----HHHHHcCCeEEEEeCCCCCc
Q 011842 143 GVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVF----KAARMYRMECVKVDCLISGE 218 (476)
Q Consensus 143 ~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~----~~~~~~G~~v~~v~~~~~g~ 218 (476)
.+.+.++.|-|.+. ++.+++|..|+..++.+... +||.|+.++..|..-. +..+.+|+++..++..
T Consensus 67 ~lE~~~a~LEg~~~----~~afsSGmaAI~~~~l~ll~--~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~d~~---- 136 (396)
T COG0626 67 ALEEALAELEGGED----AFAFSSGMAAISTALLALLK--AGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFVDPG---- 136 (396)
T ss_pred HHHHHHHHhhCCCc----EEEecCcHHHHHHHHHHhcC--CCCEEEecCCccchHHHHHHHHHHhcCeEEEEECCC----
Confidence 33444666666653 89999999999998888776 8999999998775533 4445568899888754
Q ss_pred cCHHHHHHHHHc-CCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCccc
Q 011842 219 IDCADFKAKLLQ-NKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKP 297 (476)
Q Consensus 219 ~D~~~Le~~l~~-~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~ 297 (476)
|.+.+++++.+ +++ +|.+..|+|++..+.||++|+++|+++|+ .++||..++..++. -....+
T Consensus 137 -~~~~~~~~~~~~~tk---~v~lEtPsNP~l~v~DI~~i~~~A~~~g~-----~vvVDNTfatP~~q-------~PL~~G 200 (396)
T COG0626 137 -DDEALEAAIKEPNTK---LVFLETPSNPLLEVPDIPAIARLAKAYGA-----LVVVDNTFATPVLQ-------RPLELG 200 (396)
T ss_pred -ChHHHHHHhcccCce---EEEEeCCCCcccccccHHHHHHHHHhcCC-----EEEEECCccccccc-------ChhhcC
Confidence 56677777764 665 89999999999999999999999999999 99999998876553 111124
Q ss_pred ccEEEEcCCCCCCCCCC--ceeEEeehhhh-hhhc-CCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHH
Q 011842 298 IGSVSVSGHKFVGCPMP--CGVQITRMEHI-NVLS-SNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKC 373 (476)
Q Consensus 298 ~Dsi~~s~hK~l~~p~~--~G~l~~~~~~~-~~l~-~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~ 373 (476)
+|++.-|..|++++--. .|+++.+++.+ +.+. ....++ |+- ..+...|..++ |.+.+.-++++.
T Consensus 201 aDIVvhSaTKyl~GHsDvl~G~v~~~~~~~~~~~~~~~~~~~--------G~~--l~p~dA~l~lR--GlkTL~~Rm~~~ 268 (396)
T COG0626 201 ADIVVHSATKYLGGHSDVLGGVVLTPNEELYELLFFAQRANT--------GAV--LSPFDAWLLLR--GLRTLALRMERH 268 (396)
T ss_pred CCEEEEeccccccCCcceeeeEEecChHHHHHHHHHHHHhhc--------CCC--CCHHHHHHHHh--ccchHHHHHHHH
Confidence 99999999999985432 45566566543 2221 111111 111 23566676665 567788899999
Q ss_pred HHHHHHHHHHHHhcCCeE-eecC-----------------CeeEEEEecCCc---HHHhhceee----------------
Q 011842 374 LRNAHYLKDRLLDAGISA-MLNE-----------------LSSTVVFERPQD---EEFVRRWQL---------------- 416 (476)
Q Consensus 374 ~~~a~~l~~~L~~~g~~~-~~~~-----------------~~~iv~f~~~~~---~~~~~~~~l---------------- 416 (476)
.++|..+.+.|++.+... +..| ...+++|..... ..|.+.+.+
T Consensus 269 ~~nA~~IA~~L~~~p~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~~~~~~~f~~~L~l~~~a~SlGgveSLi~~ 348 (396)
T COG0626 269 NENALKIAEFLADHPKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKNEEAAKKFLDSLKLFKLAESLGGVESLISH 348 (396)
T ss_pred HHHHHHHHHHHhcCCCeEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCChHHHHHHHHhCCccEEeccCCCccccccc
Confidence 999999999999976543 3333 246788887652 234443332
Q ss_pred c-----------------ccCCEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Q 011842 417 A-----------------CQGNIAHVVVMPNVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 417 ~-----------------~~~~~lRv~~~~~~T~edid~~~~~l~~~~~~ 449 (476)
+ -.++.+|+++. -||++.++++|+++.+.
T Consensus 349 pa~~th~~~~~~~r~~~Gi~~~LvRlSVG----lEd~eDLi~Dl~~Al~~ 394 (396)
T COG0626 349 PATMTHASIPLEERAKAGITDGLVRLSVG----LEDVEDLIADLEQALAK 394 (396)
T ss_pred ccccCcccCCHhHHHhcCCCCCeEEEEec----CCCHHHHHHHHHHHHHh
Confidence 0 01356888876 56677777777766554
No 316
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.52 E-value=3.1e-11 Score=125.94 Aligned_cols=293 Identities=13% Similarity=0.095 Sum_probs=169.9
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhC------CCcEEEecCCC-chHHHHHHHHcCC-----
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVF------PDGILYASRES-HYSVFKAARMYRM----- 206 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~------p~~~Vl~s~~~-H~S~~~~~~~~G~----- 206 (476)
+...++.+.+++++.-.. ...+|+++||+|+-.|+..+|... .+..|+.-..+ |....-+....|.
T Consensus 92 ~~~~~la~~L~~~~p~~~--~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~ 169 (445)
T PRK09221 92 PLAFELAERLAELAPGGL--DHVFFTNSGSESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRK 169 (445)
T ss_pred HHHHHHHHHHHHhCCCCC--CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhh
Confidence 445567777888764222 238999999999999999998641 13345544444 4322222211111
Q ss_pred -------eEEEEeCCC---C--C--------ccCHHHHHHHHHcCC-CCcEEEEEeeCCCccccccC----HHHHHHHHH
Q 011842 207 -------ECVKVDCLI---S--G--------EIDCADFKAKLLQNK-DKPAIINVNIGTTVKGAVDD----LDLVIQTLE 261 (476)
Q Consensus 207 -------~v~~v~~~~---~--g--------~~D~~~Le~~l~~~~-~~p~~vv~t~gtt~tG~id~----l~~I~~ia~ 261 (476)
.+..+|... . . .-..++|++.++... +....|++....+..|.+.| +++|.++|+
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~ 249 (445)
T PRK09221 170 MFGGLLPGVDHLPHTLDLPENAFSKGQPEHGAELADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICD 249 (445)
T ss_pred ccCCCCCCCeEeCCCccccccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHH
Confidence 123333211 0 0 012467888887542 45567777666788899888 999999999
Q ss_pred HhCCCCCceEEEEecCccccccccccc-CCCCCCcccccEEEEcCCCCCCCC-CCceeEEeehhhhhhhcCCccccC--C
Q 011842 262 ESGFTQDRFYIHCDGALFGLMMPFVKK-APKVSFKKPIGSVSVSGHKFVGCP-MPCGVQITRMEHINVLSSNVEYLA--S 337 (476)
Q Consensus 262 ~~g~~~~~~~lhvD~a~~g~~~~~~~~-~~~~~~~~~~Dsi~~s~hK~l~~p-~~~G~l~~~~~~~~~l~~~~~yl~--~ 337 (476)
+||+ ++++|+++.|+--.+... ...+.. ..|.++++ |.++.+ .++|.++++++..+.+.....+.. .
T Consensus 250 ~~g~-----llI~DEV~tG~GRtG~~~~~~~~gv--~PDi~~~g--K~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~ 320 (445)
T PRK09221 250 KHGI-----LLIFDEVITGFGRLGAAFAAERFGV--TPDIITFA--KGLTNGAIPMGAVIASDEIYDAFMQGPEYAIEFF 320 (445)
T ss_pred HcCC-----EEEEeehhhCCCcCchhhHHHhcCC--CCCEEEec--cccccCcccceeeEEcHHHHHhhccCcccccccc
Confidence 9999 999999996532110000 000111 25877654 888755 468889999887766543222110 0
Q ss_pred CCCcccCCCCChhHHHHH---HHHHHhChhcHHHHHHHHHHHHHHHHHHHHhc-CCeEee---cCCe-eEEEEecC---C
Q 011842 338 RDATIMGSRNGHAPIFLW---YTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDA-GISAML---NELS-STVVFERP---Q 406 (476)
Q Consensus 338 ~~~~~~~sr~~~~~l~~~---~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~-g~~~~~---~~~~-~iv~f~~~---~ 406 (476)
...|+.+ .++... ++++.+..+ +.+++..++.++|++.|++. +...+. ..+. .-+-|..+ .
T Consensus 321 ~~~T~~~-----~pl~~aaa~a~L~~i~~~---~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrg~Gl~~~v~~~~~~~~~ 392 (445)
T PRK09221 321 HGYTYSA-----HPVACAAGLATLDIYREE---DLFERAAELAPYFEDAVHSLKGLPHVIDIRNIGLVAGIELAPRPGAP 392 (445)
T ss_pred cccCCCc-----CHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHhhccCCCEEEEecCceEEEEEEecccccc
Confidence 1122222 223333 344444222 45778888999999988875 211111 1111 11222211 1
Q ss_pred c---HHH-----hhceeecccCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 011842 407 D---EEF-----VRRWQLACQGNIAHVVVMPNVTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 407 ~---~~~-----~~~~~l~~~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~ 450 (476)
. ..+ .+++.+...++.+|++....+|++|||+++++|+++.+++
T Consensus 393 ~~~~~~~~~~~~~~Gv~~~~~~~~lr~~Ppl~~t~~eid~~~~~l~~~l~~~ 444 (445)
T PRK09221 393 GARGYEAFMKCFEKGLLVRYTGDTIALSPPLIIEKAQIDELVDALGDALRAV 444 (445)
T ss_pred cchHHHHHHHHHHCCeEEeecCCEEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 1 111 2344454556789999888899999999999999987653
No 317
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.52 E-value=1.5e-11 Score=127.81 Aligned_cols=289 Identities=14% Similarity=0.105 Sum_probs=164.4
Q ss_pred HHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCC-cEEEecCCCchHHHHHHHHcCC------------
Q 011842 140 FEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPD-GILYASRESHYSVFKAARMYRM------------ 206 (476)
Q Consensus 140 le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~-~~Vl~s~~~H~S~~~~~~~~G~------------ 206 (476)
...++.+++.++.+.+.. ...+|+++|++|+-.|+..++....+ .+|.++..-|.....+....+-
T Consensus 85 ~~~~la~~l~~~~~~~~~-~~~~f~~sGsea~e~Alklar~~~~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~ 163 (425)
T PRK08088 85 PYLELCEKMNQKVPGDFA-KKTLLVTTGSEAVENAVKIARAATKRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMP 163 (425)
T ss_pred HHHHHHHHHHHhCCCCCC-CEEEEeCCcHHHHHHHHHHHHHHhCCCeEEEECCccCCccHHHHHhhCCCCccccCCCCCC
Confidence 344777888887764321 24789999999999999998875333 3445544344433322222110
Q ss_pred -eEEE--EeCCCCCccC----HHHHHHHHHc--CCCCcEEEEEeeCCCccccccC----HHHHHHHHHHhCCCCCceEEE
Q 011842 207 -ECVK--VDCLISGEID----CADFKAKLLQ--NKDKPAIINVNIGTTVKGAVDD----LDLVIQTLEESGFTQDRFYIH 273 (476)
Q Consensus 207 -~v~~--v~~~~~g~~D----~~~Le~~l~~--~~~~p~~vv~t~gtt~tG~id~----l~~I~~ia~~~g~~~~~~~lh 273 (476)
.+.. +|.+.++ ++ ++.|++.+.. ..+.+..|++.......|.+-+ +++|.++|++||+ +++
T Consensus 164 ~~~~~~~~p~~~~~-~~~~~~~~~l~~~l~~~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~-----~lI 237 (425)
T PRK08088 164 GHVYRALYPCPLHG-VSEDDAIASIERIFKNDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGI-----MLI 237 (425)
T ss_pred CCcEEcCCCccccC-ccHHHHHHHHHHHHHhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCC-----EEE
Confidence 0111 2222221 22 5668888863 2344556666555555566655 9999999999999 999
Q ss_pred EecCcccccccccccCCCCCCcc-cccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHH
Q 011842 274 CDGALFGLMMPFVKKAPKVSFKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPI 352 (476)
Q Consensus 274 vD~a~~g~~~~~~~~~~~~~~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l 352 (476)
+|++|+++.... ... .++... ..|. .++.|.++.++++|+++.+.++++.+.... + ..++.+ .++
T Consensus 238 ~Dev~~g~g~~g-~~~-~~~~~~~~pdi--~s~sK~l~~G~rig~v~~~~~~~~~~~~~~-~----~~t~~~-----~~~ 303 (425)
T PRK08088 238 ADEVQTGAGRTG-TLF-AMEQMGVAADL--TTFAKSIAGGFPLAGVTGRAEVMDAIAPGG-L----GGTYAG-----NPI 303 (425)
T ss_pred EeccccCCCcCc-chh-HHhhcCCCCCE--EEEeccccCCCcceeeEecHHHHhhcCCCC-C----CCCCCc-----CHH
Confidence 999998643221 110 011111 1554 455699988899999999988876653221 1 111221 234
Q ss_pred HHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHh----cCCeEeecCCeeEEEEec--------CCc---HHHh-----h
Q 011842 353 FLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLD----AGISAMLNELSSTVVFER--------PQD---EEFV-----R 412 (476)
Q Consensus 353 ~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~g~~~~~~~~~~iv~f~~--------~~~---~~~~-----~ 412 (476)
.+.+++..+..-..++++++.+++.+++.+.|++ .+...........+.+.. |+. ..+. +
T Consensus 304 ~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~g~G~~~~l~l~~~~~~~~p~~~~~~~l~~~~~~~ 383 (425)
T PRK08088 304 ACAAALAVLKVFEQENLLQKANALGEKLKDGLLAIAEKHPEIGDVRGLGAMIAIELFEDGDHSKPNAKLTAQIVARARDK 383 (425)
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeccceEEEEEEecCCCCCCCCHHHHHHHHHHHHhC
Confidence 4444444442222344555555556666665544 343211112122233332 111 1111 2
Q ss_pred ceee-ccc--CCEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Q 011842 413 RWQL-ACQ--GNIAHVVVMPNVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 413 ~~~l-~~~--~~~lRv~~~~~~T~edid~~~~~l~~~~~~ 449 (476)
++.+ ++. .+.+|+++...+|+++|+..++.|.++.+.
T Consensus 384 Gv~~~~~~~~~~~iRl~~~~~~t~~ei~~~i~~l~~~l~~ 423 (425)
T PRK08088 384 GLILLSCGPYYNVLRILVPLTIEDAQIRQGLEIIAQCFDE 423 (425)
T ss_pred CCEEecCCCCCCEEEEECCCCcCHHHHHHHHHHHHHHHHh
Confidence 2222 222 478999998899999999999999988764
No 318
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.52 E-value=1.1e-11 Score=128.89 Aligned_cols=280 Identities=18% Similarity=0.155 Sum_probs=167.4
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCC-chHHHHHHHHcCC-----------
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRES-HYSVFKAARMYRM----------- 206 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~-H~S~~~~~~~~G~----------- 206 (476)
+.+.++.+.+.+++.- . ...+|+++||+|+..|++.+|....+..|+.-+.+ |....-+....|.
T Consensus 93 ~~~~~la~~l~~~~p~-~--~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~ 169 (428)
T PRK12389 93 ELEIEFAKMLKEAIPS-L--EKVRFVNSGTEAVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSA 169 (428)
T ss_pred HHHHHHHHHHHHhCCC-C--cEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCC
Confidence 5556777777776641 1 24899999999999999999986445556554444 4332222222221
Q ss_pred --------eEEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC----HHHHHHHHHHhCCCCCceEEEE
Q 011842 207 --------ECVKVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD----LDLVIQTLEESGFTQDRFYIHC 274 (476)
Q Consensus 207 --------~v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~----l~~I~~ia~~~g~~~~~~~lhv 274 (476)
++..+|.+ |++.|++.+++..+.+..|++.-..+..|.+.| +++|.++|++||+ ++++
T Consensus 170 ~~~~~~~~~~~~~~~~-----d~~~l~~~l~~~~~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~-----llI~ 239 (428)
T PRK12389 170 GVPKSIAQEVITVPFN-----DIEALKEALDKWGDEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGA-----LVIY 239 (428)
T ss_pred CCCCcccCceEEcCCC-----CHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCC-----EEEE
Confidence 12222322 789999999765555567777656777888888 9999999999999 9999
Q ss_pred ecCcccccccccccCC-CCCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCC-ccccCCCCCcccCCCCChhHH
Q 011842 275 DGALFGLMMPFVKKAP-KVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSN-VEYLASRDATIMGSRNGHAPI 352 (476)
Q Consensus 275 D~a~~g~~~~~~~~~~-~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~-~~yl~~~~~~~~~sr~~~~~l 352 (476)
|+++.|+-. ...... .+.. ..|.+++ .|.++.++++|.++.++++.+.+... ..+. ..|+.+. ++
T Consensus 240 DEV~tG~Rt-~~~~a~~~~gv--~PDivt~--gK~lggG~Pi~av~~~~~i~~~~~~~~~~~~---~~T~~gn-----pl 306 (428)
T PRK12389 240 DEVITAFRF-MYGGAQDLLGV--EPDLTAL--GKIIGGGLPIGAYGGRKDIMEQVAPLGPAYQ---AGTMAGN-----PA 306 (428)
T ss_pred Ecccccccc-CcchhhHHhCC--CCCeeee--chhhcCCCceeEEeEHHHHHhhhccCCCccc---ccCCccC-----HH
Confidence 999987621 111000 0111 2687655 59988888999999998877665321 1111 1122222 33
Q ss_pred HHHH---HHHHhChhcHHHHHHHHHHHHHHHHHHHHh----cCCeEee-c-CCeeEEEEecCC----------cHH----
Q 011842 353 FLWY---TLNRKGYKGFQKEVQKCLRNAHYLKDRLLD----AGISAML-N-ELSSTVVFERPQ----------DEE---- 409 (476)
Q Consensus 353 ~~~~---~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~g~~~~~-~-~~~~iv~f~~~~----------~~~---- 409 (476)
...+ +++.+..+ +..++..++.++|++.|++ .++..-. . ....-+.|.... +..
T Consensus 307 ~~Aaala~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~~~v~r~~g~~gi~~~~~~~~~~~~~~~~~~~~~~~ 383 (428)
T PRK12389 307 SMAAGIACLEVLQQE---GVYEKLDRLGAMLEEGILEAAEKHGITITINRLKGALTVYFTDEKVTNYDQAERSDGEAFGK 383 (428)
T ss_pred HHHHHHHHHHHHhcc---cHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCcEEEEEEeCCCCCChhhhcccCHHHHHH
Confidence 3333 44444322 4667778888888888876 3432211 1 111122232111 111
Q ss_pred Hh-----hceeecccC-CEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Q 011842 410 FV-----RRWQLACQG-NIAHVVVMPNVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 410 ~~-----~~~~l~~~~-~~lRv~~~~~~T~edid~~~~~l~~~~~~ 449 (476)
+. +++.+...+ .. +.+...+|++|||.++++++++.++
T Consensus 384 ~~~~l~~~Gv~~~~~~~~~--~~~~l~~t~e~id~~~~~l~~~l~~ 427 (428)
T PRK12389 384 FFKLMLNQGINLAPSKYEA--WFLTTAHTEEDIEETLEAVDRAFAQ 427 (428)
T ss_pred HHHHHHHCCcEeecCCCCC--eeecCCCCHHHHHHHHHHHHHHHHh
Confidence 11 122221111 11 3456778999999999999988753
No 319
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.50 E-value=5.1e-11 Score=124.17 Aligned_cols=294 Identities=13% Similarity=0.044 Sum_probs=171.0
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhC------CCcEEEecCCCchHHH-HHHHHcC------
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVF------PDGILYASRESHYSVF-KAARMYR------ 205 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~------p~~~Vl~s~~~H~S~~-~~~~~~G------ 205 (476)
+.+.++.+.+++++.-.. ...+|+++||+|+-.|+..+|... .+..|+.-..+|.... -+..+.|
T Consensus 89 ~~~~~la~~l~~~~p~~~--~~v~f~~sGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~ 166 (442)
T PRK13360 89 PKAFELANRIAEIAPGGL--NHVFFTNSGSESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRK 166 (442)
T ss_pred HHHHHHHHHHHHhCCCCC--CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhh
Confidence 555677788888763211 238999999999999999998641 1345665555443322 1211111
Q ss_pred ------CeEEEEeCCCC-----C--------ccCHHHHHHHHHcC-CCCcEEEEEeeCCCccccccC----HHHHHHHHH
Q 011842 206 ------MECVKVDCLIS-----G--------EIDCADFKAKLLQN-KDKPAIINVNIGTTVKGAVDD----LDLVIQTLE 261 (476)
Q Consensus 206 ------~~v~~v~~~~~-----g--------~~D~~~Le~~l~~~-~~~p~~vv~t~gtt~tG~id~----l~~I~~ia~ 261 (476)
-.+..+|.... . .-..++|++.+... .+.+..|++....++.|.+.| +++|.++|+
T Consensus 167 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~ 246 (442)
T PRK13360 167 AFGALLPGVDHLPHTLDLARNAFSKGQPEHGAELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICD 246 (442)
T ss_pred ccCCCCCCCEEeCCCchhhccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHH
Confidence 12333443211 0 01256888888643 244556777666778898888 999999999
Q ss_pred HhCCCCCceEEEEecCcccccccccccC-CCCCCcccccEEEEcCCCCCCCC-CCceeEEeehhhhhhhcCCc----ccc
Q 011842 262 ESGFTQDRFYIHCDGALFGLMMPFVKKA-PKVSFKKPIGSVSVSGHKFVGCP-MPCGVQITRMEHINVLSSNV----EYL 335 (476)
Q Consensus 262 ~~g~~~~~~~lhvD~a~~g~~~~~~~~~-~~~~~~~~~Dsi~~s~hK~l~~p-~~~G~l~~~~~~~~~l~~~~----~yl 335 (476)
+||+ ++++|+++.|+-..+.... ..+.. ..|.+++ .|.++.+ .++|.++++++..+.+.... .++
T Consensus 247 ~~g~-----llI~DEv~tG~GrtG~~~a~~~~gv--~PDivt~--gK~l~gG~~P~gav~~~~~i~~~~~~~~~~~~~~~ 317 (442)
T PRK13360 247 KHGI-----LLIFDEVITGFGRLGAPFAAQYFGV--TPDLLTC--AKGLTNGAIPMGAVFVSSEIHDAFMQGPEAGIEFF 317 (442)
T ss_pred HcCC-----EEEEechhhCCCCCccchhhhhcCC--CCceeee--eeccccCccceEEEEEcHHHHHHhhcCCccccccc
Confidence 9999 9999999955311110000 01111 2687765 5988766 57889999988776653221 121
Q ss_pred CCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcC-CeEe---ecCCe-eEEEEec--C-Cc
Q 011842 336 ASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAG-ISAM---LNELS-STVVFER--P-QD 407 (476)
Q Consensus 336 ~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g-~~~~---~~~~~-~iv~f~~--~-~~ 407 (476)
. ..|+.+.. .......++++.+..+ ...++..++.++|++.|++.. ...+ ...+. ..+-|.. . ..
T Consensus 318 ~--~~T~~g~p--l~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl~~~~~l~~~~~~~~ 390 (442)
T PRK13360 318 H--GYTYSGHP--LACAAALATLDLYERE---GLLTRAARLAPYWEDALHSLRDAPHVIDIRNLGLVGAVELAPRDGKPG 390 (442)
T ss_pred c--CCCCCCCH--HHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccceEEEEEEecCCCCcc
Confidence 1 12333221 1222233344444333 356677778888888887643 1111 11111 1112221 1 11
Q ss_pred ---HHH-----hhceeecccCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 011842 408 ---EEF-----VRRWQLACQGNIAHVVVMPNVTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 408 ---~~~-----~~~~~l~~~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~ 450 (476)
..+ .+++.+...++.+|++....+|++|||.++++|.++.+++
T Consensus 391 ~~~~~~~~~l~~~Gvl~~~~~~~lr~~Ppl~~t~~eid~~~~~l~~~l~~~ 441 (442)
T PRK13360 391 KRAYEVFLKCFEKGLMIRYTGDILALSPPLIIEEAQIDELFDILAQALKET 441 (442)
T ss_pred hhHHHHHHHHHHCCcEEEecCCEEEEeCCCccCHHHHHHHHHHHHHHHHHh
Confidence 111 2344444456789999888999999999999999988654
No 320
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.50 E-value=2e-11 Score=117.94 Aligned_cols=295 Identities=16% Similarity=0.165 Sum_probs=194.6
Q ss_pred hHHHHHHHHHHHHHHcCCCCCcccEEEc--CCchhHHHHHHHHHHhhCCCcEEE---ecCCCchHHH---HHHHHcCC--
Q 011842 137 SRQFEVGVLDWFARLWELENNEYWGYIT--NCGTEGNLHGILVGREVFPDGILY---ASRESHYSVF---KAARMYRM-- 206 (476)
Q Consensus 137 ~~~le~~~~~~la~l~g~~~~~~~g~~t--~ggt~An~~al~aa~~~~p~~~Vl---~s~~~H~S~~---~~~~~~G~-- 206 (476)
..++|.-+.+...+.|+++++ .||+-+ -+||-||+.+-.+... |++.|. .+.-.|.|.- ..-++...
T Consensus 84 ID~iE~LCq~RALeaF~ldp~-kWGVNVQp~SGSPANfavYtall~--Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~Si 160 (477)
T KOG2467|consen 84 IDQIELLCQKRALEAFGLDPE-KWGVNVQPYSGSPANFAVYTALLK--PHERIMGLDLPSGGHLSHGYQTPTKKISATSI 160 (477)
T ss_pred HHHHHHHHHHHHHHHhCCCHH-HCceeeccCCCCchhhHHHhhhcC--CCCeeeeccCCCCCccccccccCCceeeeeee
Confidence 356777778888889999964 688754 5899999998888776 888776 3444554421 11111111
Q ss_pred --eEEEEeCC-CCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcc-ccc
Q 011842 207 --ECVKVDCL-ISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALF-GLM 282 (476)
Q Consensus 207 --~v~~v~~~-~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~-g~~ 282 (476)
+..++.+| .+|-||.|.||+.... -+|.++++ |++..--.-|..++.+||.+.|+ ++++|.||= |.+
T Consensus 161 yFeSmPYkv~~~TG~IDYD~Le~~A~~--frPk~iia--G~SaY~R~~DYaR~R~Iad~~gA-----~Lm~DMAHISgLV 231 (477)
T KOG2467|consen 161 YFESMPYKVDPSTGYIDYDKLEKTATL--FRPKLIIA--GTSAYSRLIDYARFRKIADKVGA-----YLMADMAHISGLV 231 (477)
T ss_pred ecccCceeeCCCCCceehHHHHHHHHh--cCCcEEEe--ccccchhhccHHHHHHHHHhcCc-----eeehhhhhHHHHH
Confidence 22334556 4699999999987543 34557666 66666667789999999999999 999999984 333
Q ss_pred ccccccCCCCCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhh---cCCccccCCC------CCcccCCCCChhHHH
Q 011842 283 MPFVKKAPKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVL---SSNVEYLASR------DATIMGSRNGHAPIF 353 (476)
Q Consensus 283 ~~~~~~~~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l---~~~~~yl~~~------~~~~~~sr~~~~~l~ 353 (476)
..... .+.| +.+|+++.+.||.|-+| +.|+++.|......- .....|=... =+.++|++..+...+
T Consensus 232 AA~vi-psPF---ey~DiVTTTTHKsLRGP-Rg~mIFyRkGvk~~~~k~g~~i~ydlE~kINfaVFP~lQGGPHNhtIaa 306 (477)
T KOG2467|consen 232 AAGVI-PSPF---EYCDIVTTTTHKSLRGP-RGAMIFYRKGVKSIKPKQGKEILYDLEDKINFAVFPGLQGGPHNHTIAA 306 (477)
T ss_pred hcccC-CCcc---cccceeeccccccccCC-cceeEEEeccCCcCCCCCCCcceechhhhhhhhccccccCCCCcchHHH
Confidence 32111 1223 34899999999999965 456777666431110 1111221100 135677877777788
Q ss_pred HHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCC-eeEEEEecCC---c----HHHhhceeecc-------
Q 011842 354 LWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNEL-SSTVVFERPQ---D----EEFVRRWQLAC------- 418 (476)
Q Consensus 354 ~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~-~~iv~f~~~~---~----~~~~~~~~l~~------- 418 (476)
++.+|+....-.|.+..++...|++.|.+.|.+.|...+.... ...|.+...+ + +...+...+.+
T Consensus 307 lAvALkQa~tpefk~Yq~qV~~Nakala~~l~~~Gy~lvtgGTDnHlvLvDLr~~G~dGarvE~vle~~~I~~NKNtvpG 386 (477)
T KOG2467|consen 307 LAVALKQAMTPEFKEYQKQVLKNAKALASALISRGYKLVTGGTDNHLVLVDLRPKGVDGARVEKVLELCHIALNKNTVPG 386 (477)
T ss_pred HHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHcCceEecCCccceEEEEeccccCCchHHHHHHHHHhhhhhcCCcCCC
Confidence 8889998888889999999999999999999999987765433 3455554321 1 22223233322
Q ss_pred -----cCCEEEEEE----cCCCCHHHHHHHHHHHHHHHH
Q 011842 419 -----QGNIAHVVV----MPNVTIDKLDDFLNELIENRS 448 (476)
Q Consensus 419 -----~~~~lRv~~----~~~~T~edid~~~~~l~~~~~ 448 (476)
..+.+|+.. +...-++|++++.+-|.+..+
T Consensus 387 D~Sal~PgGiRiGtPAmTsRG~~e~df~~v~~fi~~av~ 425 (477)
T KOG2467|consen 387 DKSALSPGGIRIGTPAMTSRGFGEEDFEKVADFIDRAVK 425 (477)
T ss_pred CccccCCCceeccchhhcccCccHHHHHHHHHHHHHHHH
Confidence 135678754 444567888888888776543
No 321
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.50 E-value=2.3e-11 Score=126.27 Aligned_cols=291 Identities=14% Similarity=0.050 Sum_probs=167.2
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhC-----C-Cc-EEEecCCCchHHHHHHHHcCC-----
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVF-----P-DG-ILYASRESHYSVFKAARMYRM----- 206 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~-----p-~~-~Vl~s~~~H~S~~~~~~~~G~----- 206 (476)
....++.++++++++-+- ...+|+++||+|+-.|+..++... + +. +|..+...|....-+..+.+-
T Consensus 88 ~~~~~la~~l~~~~~~~~--~~v~f~~sGseA~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~ 165 (427)
T TIGR00508 88 KPAIELCQKLVKMTPNAL--DCVFLADSGSVAVEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMH 165 (427)
T ss_pred HHHHHHHHHHHhhCCCCC--CEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCccccc
Confidence 334567777777764322 248999999999999999988642 1 23 444444455433322222221
Q ss_pred --------eEEEEeCCCC------CccCHHHHHHHHHcCCCCcEEEEEeeCCCccc-----cccCHHHHHHHHHHhCCCC
Q 011842 207 --------ECVKVDCLIS------GEIDCADFKAKLLQNKDKPAIINVNIGTTVKG-----AVDDLDLVIQTLEESGFTQ 267 (476)
Q Consensus 207 --------~v~~v~~~~~------g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG-----~id~l~~I~~ia~~~g~~~ 267 (476)
....++.... ..-|++++++.+.+..+....|++.......| ..+.+++|.++|++||+
T Consensus 166 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~l~~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~-- 243 (427)
T TIGR00508 166 SLYKGYLPEQIFAPAPQNRFDEEWNEEAITPLAKLMELHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDI-- 243 (427)
T ss_pred ccccccCCCCeEcCCCCccccchhHHHHHHHHHHHHHhcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCC--
Confidence 1112221100 11267788888875443444555543234444 34679999999999999
Q ss_pred CceEEEEecCccccccccccc-CC-CCCCcccccEEEEcCCCCCCCCC-CceeEEeehhhhhhhcCCc--cccCCCCCcc
Q 011842 268 DRFYIHCDGALFGLMMPFVKK-AP-KVSFKKPIGSVSVSGHKFVGCPM-PCGVQITRMEHINVLSSNV--EYLASRDATI 342 (476)
Q Consensus 268 ~~~~lhvD~a~~g~~~~~~~~-~~-~~~~~~~~Dsi~~s~hK~l~~p~-~~G~l~~~~~~~~~l~~~~--~yl~~~~~~~ 342 (476)
++++|++|.|+.. ..+. .. .++. ..|++++ .|.++.++ .++.++.++++.+.+.... .|.. ..|+
T Consensus 244 ---llI~DEv~tG~Gr-~G~~~~~~~~~v--~pDi~~~--gK~l~gG~~p~~a~~~~~~~~~~~~~~~~~~~~~--~~T~ 313 (427)
T TIGR00508 244 ---LLIADEIATGFGR-TGKLFACEHAGV--VPDILCV--GKALTGGYMTLSATVTTDKVAQTISSGEAGCFMH--GPTF 313 (427)
T ss_pred ---EEEEeccccCCCc-CCccchhhhcCC--CCCEEEe--chhhhcCcccceEEEEcHHHHHHHhcCCCCcccc--CCCC
Confidence 9999999965322 1111 11 1111 2687774 68887774 7888999888766664211 1211 1122
Q ss_pred cCCCCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecC---CeeEEEEecCC---cHHH-----h
Q 011842 343 MGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNE---LSSTVVFERPQ---DEEF-----V 411 (476)
Q Consensus 343 ~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~---~~~iv~f~~~~---~~~~-----~ 411 (476)
.+.. .......++++.+..+ +..++..++.++|++.|++.+....... ...++.+...+ ...+ .
T Consensus 314 ~g~p--~~~aaa~a~l~~l~~~---~~~~~~~~~~~~l~~~L~~l~~~~~i~~vrg~G~~~~i~~~~~~~~~~~~~~l~~ 388 (427)
T TIGR00508 314 MGNP--LACAVAEASLAILLEG---EWQKQVSAIENQLKRELSPLRKNPVVKDVRVLGAIGVVEMYKPVNVEELQKKFVE 388 (427)
T ss_pred CcCH--HHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHhhcCCCEEeEeccccEEEEEECCccCHHHHHHHHHH
Confidence 2221 1222233444444222 4567888899999999988643211111 13333333221 1222 2
Q ss_pred hceeecccCCEEEEEEcCCCCHHHHHHHHHHHHHHHH
Q 011842 412 RRWQLACQGNIAHVVVMPNVTIDKLDDFLNELIENRS 448 (476)
Q Consensus 412 ~~~~l~~~~~~lRv~~~~~~T~edid~~~~~l~~~~~ 448 (476)
+++.+...++.+|++....+|++|||+++++++++.+
T Consensus 389 ~Gv~~~~~~~~l~~~ppl~~t~~~id~~~~~l~~~l~ 425 (427)
T TIGR00508 389 QGVWIRPFGKLIYVMPPYIITTEQLQKLTAALIEALH 425 (427)
T ss_pred CCeEEEecCCEEEEECCCCCCHHHHHHHHHHHHHHHh
Confidence 3444444456788887778999999999999998875
No 322
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.49 E-value=5.7e-11 Score=123.27 Aligned_cols=290 Identities=17% Similarity=0.113 Sum_probs=168.2
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCC-chHHHHHHHHcCC-----------
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRES-HYSVFKAARMYRM----------- 206 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~-H~S~~~~~~~~G~----------- 206 (476)
+...++.+.+.++..... ....+|+++||+|+-.|++.+|....+..|+.-+.+ |....-+..+.+.
T Consensus 83 ~~~~~la~~l~~~~p~~~-~~~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~ 161 (421)
T PRK06777 83 ASYVTLAERINALAPIDG-PAKTAFFTTGAEAVENAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPF 161 (421)
T ss_pred hHHHHHHHHHHHhCCCCC-CceEEEeCCcHHHHHHHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCC
Confidence 444566777777764321 124889999999999999999875444556554444 4333233322221
Q ss_pred --eEEEEeCCCC--C---ccCHHHHHHHHHc--CCCCcEEEEEeeCCCccccc-cC---HHHHHHHHHHhCCCCCceEEE
Q 011842 207 --ECVKVDCLIS--G---EIDCADFKAKLLQ--NKDKPAIINVNIGTTVKGAV-DD---LDLVIQTLEESGFTQDRFYIH 273 (476)
Q Consensus 207 --~v~~v~~~~~--g---~~D~~~Le~~l~~--~~~~p~~vv~t~gtt~tG~i-d~---l~~I~~ia~~~g~~~~~~~lh 273 (476)
.+..++.... + .-+++.+++.+.+ ..+....|++.-..+..|.. .| +++|.++|++||+ +++
T Consensus 162 ~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~-----llI 236 (421)
T PRK06777 162 PGSIFHALYPNELHGVSVEEALSSVERLFKADIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGI-----LLI 236 (421)
T ss_pred CCCcEEcCCCccccCcCHHHHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCC-----EEE
Confidence 1122222111 1 1246778888864 23345566665445566643 34 9999999999999 999
Q ss_pred EecCcccccccccccCCCCCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHH
Q 011842 274 CDGALFGLMMPFVKKAPKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIF 353 (476)
Q Consensus 274 vD~a~~g~~~~~~~~~~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~ 353 (476)
+|++|.++... ........+....|+++ +.|.++.++++|+++.++++.+.+.... + ..++.+ .++.
T Consensus 237 ~DEv~tg~gr~-g~~~~~~~~~~~pDiv~--~sK~l~~G~pigav~~~~~i~~~~~~~~-~----~~T~~~-----~p~~ 303 (421)
T PRK06777 237 ADEVQTGFART-GKLFAMEYYDVKPDLIT--MAKSLGGGMPISAVVGRAEVMDAPAPGG-L----GGTYAG-----NPLA 303 (421)
T ss_pred EechhhCCccC-CchhhhhhcCCCCCEEe--eehhhcCCCceEEEEEcHHHHhccCCCC-C----CCCCCc-----CHHH
Confidence 99999865322 11111011111267665 5698888899999999988776653221 1 112222 2344
Q ss_pred HHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhc----CCeEeecC-CeeEEE-EecCC----cHHHh---------hce
Q 011842 354 LWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDA----GISAMLNE-LSSTVV-FERPQ----DEEFV---------RRW 414 (476)
Q Consensus 354 ~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----g~~~~~~~-~~~iv~-f~~~~----~~~~~---------~~~ 414 (476)
+.++++.+..-.-++..++..++.++|.+.|++. +......+ +..+.+ |..+. +.++. ++.
T Consensus 304 ~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv 383 (421)
T PRK06777 304 VAAALAVLDVIAEEKLCQRALILGAHLVEVLEKAKASCPAIVDIRARGSMVAVEFNDPQTGKPSPEFTRQYQRQALEEGL 383 (421)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhCCCeEEecCceEEEEEEEecCccCCccHHHHHHHHHHHHhCCe
Confidence 4444444321111457778888888888888774 33222223 333322 33321 11121 223
Q ss_pred ee-ccc--CCEEEEEEcCCCCHHHHHHHHHHHHHHH
Q 011842 415 QL-ACQ--GNIAHVVVMPNVTIDKLDDFLNELIENR 447 (476)
Q Consensus 415 ~l-~~~--~~~lRv~~~~~~T~edid~~~~~l~~~~ 447 (476)
.+ +.. ++.+|+......|+++||.+++.|++..
T Consensus 384 ~i~~~~~~g~~lr~~ppl~i~~~~i~~~~~~l~~~l 419 (421)
T PRK06777 384 LLLSCGVHGNVIRFLYPLTIPDAQFSKALNILTRLL 419 (421)
T ss_pred EEeecCCCCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Confidence 33 222 4688988766899999999999998765
No 323
>PLN00144 acetylornithine transaminase
Probab=99.49 E-value=6.1e-11 Score=121.52 Aligned_cols=281 Identities=14% Similarity=0.077 Sum_probs=160.2
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCC-------------CcEEEecCCC-chHHHHHHHHc
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFP-------------DGILYASRES-HYSVFKAARMY 204 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p-------------~~~Vl~s~~~-H~S~~~~~~~~ 204 (476)
+...++.+.+.++.+.+ ..+|+++||+|+-.|+..+|.... +..|+.-+.+ |....-+....
T Consensus 57 ~~~~~la~~l~~~~~~~----~v~f~~sGseA~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~ 132 (382)
T PLN00144 57 IPQVELAKRLVASSFAD----RVFFCNSGTEANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALT 132 (382)
T ss_pred HHHHHHHHHHHhcCCCC----eEEEeCCcHHHHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcC
Confidence 44556777777765433 389999999999999999986421 2345544444 43332222222
Q ss_pred CC------------eEEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccc--cC--HHHHHHHHHHhCCCCC
Q 011842 205 RM------------ECVKVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAV--DD--LDLVIQTLEESGFTQD 268 (476)
Q Consensus 205 G~------------~v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~i--d~--l~~I~~ia~~~g~~~~ 268 (476)
+- ++..+|.+ |++.|++.+.. ..+..|++.-..++.|.. ++ +++|.++|++||+
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~~~~--~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~--- 202 (382)
T PLN00144 133 SKEQYRTPFEPLMPGVTFVEYG-----NLEAARKLIQK--GKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGA--- 202 (382)
T ss_pred CCccccccCCCCCCCeEEeCCC-----CHHHHHHhcCC--CCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCC---
Confidence 21 12333332 78999988853 234455554334443333 34 8999999999999
Q ss_pred ceEEEEecCcccccccccccCC-CCCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCC
Q 011842 269 RFYIHCDGALFGLMMPFVKKAP-KVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRN 347 (476)
Q Consensus 269 ~~~lhvD~a~~g~~~~~~~~~~-~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~ 347 (476)
++++|++|.++......... ...+ ..|.++ +.|.++.+.++|+++.++++.+.+... .+ ..++.++.
T Consensus 203 --llI~DEv~tg~gr~g~~~~~~~~~~--~PDi~t--~sK~l~~G~pig~v~~~~~~~~~~~~~-~~----~~T~~~~p- 270 (382)
T PLN00144 203 --LLVFDEVQCGLGRTGYLWAHEAYGV--EPDIMT--LAKPLAGGLPIGAVLVTEKVASAINPG-DH----GSTFAGGP- 270 (382)
T ss_pred --EEEEechhhCCCccchHhhhhhcCC--CCCEEE--ecccccCCcceEEEEEcHHHHhccCCC-CC----CCCCCCCH-
Confidence 99999999865332111000 1111 257444 459998889999999998877655321 11 11222221
Q ss_pred ChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHh----cCCeEeecCCeeEEEEecC-CcHHH-----hhceeec
Q 011842 348 GHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLD----AGISAMLNELSSTVVFERP-QDEEF-----VRRWQLA 417 (476)
Q Consensus 348 ~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~g~~~~~~~~~~iv~f~~~-~~~~~-----~~~~~l~ 417 (476)
.......++++.+.... ..++..++.++|++.|++ .+...-......++.+... ....+ .++..+.
T Consensus 271 -l~~aaa~a~l~~i~~~~---~~~~~~~~g~~l~~~l~~~~~~~~~~~~vrg~G~~~~l~l~~~~~~~~~~~~~~Gv~i~ 346 (382)
T PLN00144 271 -LVCNAALAVLDKISKPG---FLASVAKKGEYLRELLRRKLGGNPHVKEVRGVGLLVGIQLDVPAGPLVDACRDSGLLVL 346 (382)
T ss_pred -HHHHHHHHHHHHHhhch---HHHHHHHHHHHHHHHHHHHHhhCCCceeeecCceEEEEEecCccHHHHHHHHHCCeEEe
Confidence 12222333345553333 344444555555555543 3322111122223333322 12222 2344443
Q ss_pred cc--CCEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Q 011842 418 CQ--GNIAHVVVMPNVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 418 ~~--~~~lRv~~~~~~T~edid~~~~~l~~~~~~ 449 (476)
.. .+.+|++.....|+++|+.+++.|.++...
T Consensus 347 ~~~~~~~lrl~p~~~~~~~~i~~~~~~l~~~l~~ 380 (382)
T PLN00144 347 TAGKGDVVRLVPPLVISEAELEQAVEILADCLPA 380 (382)
T ss_pred ecCCCCEEEEeCCCccCHHHHHHHHHHHHHHHHh
Confidence 22 488999988878999999999999988764
No 324
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.48 E-value=7.8e-11 Score=122.31 Aligned_cols=286 Identities=14% Similarity=0.089 Sum_probs=162.6
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCC-chHHHHHHHHcC--------C---
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRES-HYSVFKAARMYR--------M--- 206 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~-H~S~~~~~~~~G--------~--- 206 (476)
+.+.++.+.+.++..-. .....+|+++||+|+-.|+..+|....+..|+.-+.+ |....-+..+.+ .
T Consensus 76 ~~~~~la~~l~~~~p~~-~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~ 154 (420)
T TIGR00700 76 EGYVALAEKLNRIAPGS-GPKKSVFFNSGAEAVENAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPF 154 (420)
T ss_pred hHHHHHHHHHHHhCCCC-CCCEEEEeCCcHHHHHHHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCC
Confidence 44456677777776321 1124899999999999999999976444555544444 433222222211 1
Q ss_pred --eEEEEeCCCCC-----------ccCHHHHHHHHH--cCCCCcEEEEEeeCCCccccccC----HHHHHHHHHHhCCCC
Q 011842 207 --ECVKVDCLISG-----------EIDCADFKAKLL--QNKDKPAIINVNIGTTVKGAVDD----LDLVIQTLEESGFTQ 267 (476)
Q Consensus 207 --~v~~v~~~~~g-----------~~D~~~Le~~l~--~~~~~p~~vv~t~gtt~tG~id~----l~~I~~ia~~~g~~~ 267 (476)
.+..+|..... .-+++.+++.+. ...+....|++.-....+|.+.| +++|.++|++||+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gi-- 232 (420)
T TIGR00700 155 APEVYRAPLPYPYRDGLLDKQLSTDGELAAARAIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGI-- 232 (420)
T ss_pred CCCcEEeCCCccccccccccchhHHHHHHHHHHHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCC--
Confidence 12333331100 012567777764 23345566767655666677655 9999999999999
Q ss_pred CceEEEEecCcccccccccccCCCCC-CcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCC
Q 011842 268 DRFYIHCDGALFGLMMPFVKKAPKVS-FKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSR 346 (476)
Q Consensus 268 ~~~~lhvD~a~~g~~~~~~~~~~~~~-~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr 346 (476)
++++|++|.++.... .... +. .....|+++ +.|.++.++++|+++.++++++.+.... . ..++.++
T Consensus 233 ---llI~DEV~tg~gr~g-~~~a-~~~~~~~pDi~~--lsK~l~~G~pig~v~~~~~i~~~~~~~~--~---~~T~~~~- 299 (420)
T TIGR00700 233 ---VFIADEVQTGFARTG-AMFA-CEHEGPEPDLIT--TAKSLADGLPLSGVTGRAEIMDAPAPGG--L---GGTYAGN- 299 (420)
T ss_pred ---EEEEEecccCCcccc-hhHH-HhhcCCCCCEEE--eeccccCCcceEEEEecHHHHhhcCCCC--c---CCCCCcC-
Confidence 999999998764322 1100 11 111267666 5699888999999999988876653211 1 1122222
Q ss_pred CChhHHHHHHH---HHHhChhcHHHHHHHHHHHHHHHHHHHHh----cCCeEeecCCeeEEEEec--C----CcHH----
Q 011842 347 NGHAPIFLWYT---LNRKGYKGFQKEVQKCLRNAHYLKDRLLD----AGISAMLNELSSTVVFER--P----QDEE---- 409 (476)
Q Consensus 347 ~~~~~l~~~~~---l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~g~~~~~~~~~~iv~f~~--~----~~~~---- 409 (476)
++.++++ ++.+....+ .++..++.+++++.|++ .+......+...++.+.. + ++..
T Consensus 300 ----pl~~aaa~a~l~~l~~~~~---~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~~~~~~~~~~~~ 372 (420)
T TIGR00700 300 ----PLACAAALAVLAIIESEGL---IERARQIGRLVTDRLTTLKAVDPRIGDVRGLGAMIAVELVDPGTTEPDAGLAER 372 (420)
T ss_pred ----HHHHHHHHHHHHHHHhccH---HHHHHHHHHHHHHHHHHHHhhCCCEEEeeccceEEEEEEecCCCCCccHHHHHH
Confidence 3555555 444333333 34444455556665554 333222222222333321 1 1111
Q ss_pred Hh-----hceeecc-c--CCEEEEEEcCCCCHHHHHHHHHHHHHHH
Q 011842 410 FV-----RRWQLAC-Q--GNIAHVVVMPNVTIDKLDDFLNELIENR 447 (476)
Q Consensus 410 ~~-----~~~~l~~-~--~~~lRv~~~~~~T~edid~~~~~l~~~~ 447 (476)
+. ++..+.. . ++.+|++....+|+++|+..++.|.+++
T Consensus 373 l~~~~~~~Gv~i~p~~~f~~~lRl~p~l~~~~~~l~~~~~~l~~~l 418 (420)
T TIGR00700 373 IATAAHAAGLLLLTCGMFGNIIRFLPPLTIGDELLSEGLDILCAIL 418 (420)
T ss_pred HHHHHHHCCeEEeccCCCCCEEEEECCCCcCHHHHHHHHHHHHHHh
Confidence 11 2333322 2 4788988766789999999999998875
No 325
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.48 E-value=6e-11 Score=117.27 Aligned_cols=300 Identities=15% Similarity=0.131 Sum_probs=195.4
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCc-ccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCC
Q 011842 136 HSRQFEVGVLDWFARLWELENNE-YWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCL 214 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~-~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~ 214 (476)
|..++...+.+...-.+..+... -+.++|+|.|.+...++.++.+ +++.|++.+.++.+-....+.+|++++.|+.|
T Consensus 101 G~peLl~fik~h~~~~ih~p~~~~wdiiit~G~t~~l~~~l~~~~N--~gd~vlie~~ty~~AL~s~~a~gv~~ipv~md 178 (472)
T KOG0634|consen 101 GIPELLLFIKDHNRPTIHAPPYKNWDIIITNGNTDGLFKVLRTLIN--RGDHVLIEEYTYPSALQSMEALGVKIIPVKMD 178 (472)
T ss_pred CcHHHHHHHHHhccccccCCCCCCceEEEecCCchHHHHHHHHhhc--CCCceEEecccchHHHHhccccCceEEecccc
Confidence 55677776666544344444322 3588999999999999999998 99999999999999999999999999888887
Q ss_pred CCCccCHHHHHHHHHcCC------CCcE-EEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCccccccc
Q 011842 215 ISGEIDCADFKAKLLQNK------DKPA-IINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMP 284 (476)
Q Consensus 215 ~~g~~D~~~Le~~l~~~~------~~p~-~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~ 284 (476)
. ..+|+|.|++.+..-+ .+|. +-.+-.|.|+||..-. -++|.++|++|++ +|+.|+.|....+.
T Consensus 179 ~-~Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDf-----LIVeDdpYy~Lq~~ 252 (472)
T KOG0634|consen 179 Q-DGIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDF-----LIVEDDPYYFLQMN 252 (472)
T ss_pred C-CCCCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCE-----EEEecCccceeecc
Confidence 4 4579999999997531 1243 2233357889998754 5799999999999 99999999765543
Q ss_pred cc----cc-CCCCC-----------Ccc-cc--cEEE-EcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccC
Q 011842 285 FV----KK-APKVS-----------FKK-PI--GSVS-VSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMG 344 (476)
Q Consensus 285 ~~----~~-~~~~~-----------~~~-~~--Dsi~-~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~ 344 (476)
.. +. .+.++ +.. .. .+|. -|+.|-+..+.+.||+..++..++........ +..
T Consensus 253 ~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiiaPGlRlG~it~~~~~l~ril~~ae~------~t~- 325 (472)
T KOG0634|consen 253 TYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIAPGLRLGWITGNSLFLKRILDLAEV------ATS- 325 (472)
T ss_pred ccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhcCcceeEEeecCHHHHHHHhhhcce------eec-
Confidence 10 00 00011 100 01 1222 45789999999999999988765443221111 111
Q ss_pred CCCChhHHHHHHHHHHhChhcHHHHHHHHH----HHHHHHHHHHHh-cCC--eEeecCCeeEEEE-ecC-------Cc-H
Q 011842 345 SRNGHAPIFLWYTLNRKGYKGFQKEVQKCL----RNAHYLKDRLLD-AGI--SAMLNELSSTVVF-ERP-------QD-E 408 (476)
Q Consensus 345 sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~----~~a~~l~~~L~~-~g~--~~~~~~~~~iv~f-~~~-------~~-~ 408 (476)
+.++....-+.+.++..|++|+.+.+.+.+ .++..+...|.+ ++. ..+.+|..++..+ +++ +. +
T Consensus 326 ~pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~P~aGmFiwv~i~~~~~~~~~~i~ 405 (472)
T KOG0634|consen 326 GPSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHPPKAGMFIWVEIPYINFDTKKSIN 405 (472)
T ss_pred CcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEecCCcceEEEEEecccccccccchH
Confidence 245566777888899989988877776654 467777777777 333 3445565544443 333 21 1
Q ss_pred ---HHh------hceeecc--------c---C-CEEEEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 011842 409 ---EFV------RRWQLAC--------Q---G-NIAHVVVMPNVTIDKLDDFLNELIENRSTWY 451 (476)
Q Consensus 409 ---~~~------~~~~l~~--------~---~-~~lRv~~~~~~T~edid~~~~~l~~~~~~~~ 451 (476)
+++ ++..+.| + + -.+|+++. ....|+++.-++.+...+++.+
T Consensus 406 q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s~~kiffRls~a-~a~~e~l~~g~~rf~~~ike~f 468 (472)
T KOG0634|consen 406 QIEEIIFIKAVKNGVKLVCGSWFMVDPESSWSKIFFRLSIA-FAEPEKLDEGIERFGSVIKEHF 468 (472)
T ss_pred HHHHHHHHHHHHCCeEEecCceeEEcCccCCCcceEEEEee-cCCHHHHHHHHHHHHHHHHHHh
Confidence 111 1111111 1 2 37898775 3456677776666666655543
No 326
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.47 E-value=8.9e-11 Score=122.01 Aligned_cols=295 Identities=12% Similarity=0.072 Sum_probs=165.9
Q ss_pred HHHHHHHHHHHHHcCCCCC-cccEEE-cCCchhHHHHHHHHHHhhCCCcEEEecCCCchHH-HHHHHHc---------CC
Q 011842 139 QFEVGVLDWFARLWELENN-EYWGYI-TNCGTEGNLHGILVGREVFPDGILYASRESHYSV-FKAARMY---------RM 206 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~-~~~g~~-t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~-~~~~~~~---------G~ 206 (476)
+...++.+.+++++..+.. .....| +++||+||-.|+..+|....+..|+.-+.+|... .-+.... +.
T Consensus 82 ~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~ 161 (425)
T PRK09264 82 TAKREFLETFEETILKPRGLDYKVQFTGPTGTNAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGV 161 (425)
T ss_pred HHHHHHHHHHHHhhcCCcCCCceEEEeCCCHHHHHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCCCC
Confidence 4555667777776432211 112456 5899999999999999764445566555444332 2222221 11
Q ss_pred ---eEEEEeCCCC--Cc-cCHHHHHHHHHcCC---CCcEEEEEeeCCCccccc----cCHHHHHHHHHHhCCCCCceEEE
Q 011842 207 ---ECVKVDCLIS--GE-IDCADFKAKLLQNK---DKPAIINVNIGTTVKGAV----DDLDLVIQTLEESGFTQDRFYIH 273 (476)
Q Consensus 207 ---~v~~v~~~~~--g~-~D~~~Le~~l~~~~---~~p~~vv~t~gtt~tG~i----d~l~~I~~ia~~~g~~~~~~~lh 273 (476)
.+..+|.... .. -|+++|++.|.+.. +....|++.-..+..|.+ +.+++|.++|++||+ +++
T Consensus 162 ~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~-----llI 236 (425)
T PRK09264 162 PLNNVTRMPYDGYFGGDVDTLAYLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDI-----LLI 236 (425)
T ss_pred CCCCeEEeCCCCccccchhHHHHHHHHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCc-----EEE
Confidence 2445554311 01 27788999987532 234566666556666654 359999999999999 999
Q ss_pred EecCccccccccccc-C-CCCCCcccccEEEEcCCCCCCC-CCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChh
Q 011842 274 CDGALFGLMMPFVKK-A-PKVSFKKPIGSVSVSGHKFVGC-PMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHA 350 (476)
Q Consensus 274 vD~a~~g~~~~~~~~-~-~~~~~~~~~Dsi~~s~hK~l~~-p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~ 350 (476)
+|++|.|+... ... . ..+.. ..|+++++ |.++. +.++|++++++++ ..+.. ... ..++.+.. ..
T Consensus 237 ~DEV~tG~Grt-G~~~~~~~~~v--~PDi~t~~--K~l~~~G~pigav~~~~~i-~~~~~--~~~---~~T~~gnp--~~ 303 (425)
T PRK09264 237 VDDIQAGCGRT-GTFFSFERAGI--TPDIVTLS--KSISGYGLPMALVLIKPEL-DVWKP--GEH---NGTFRGNN--LA 303 (425)
T ss_pred EechhhCCccc-cHHHHHhhcCC--CCCEEEec--cccCCCccceEEEEEchhh-hccCC--Ccc---CCCCCCCH--HH
Confidence 99999764211 110 0 00111 25877664 88876 7889999998775 22211 010 11222221 11
Q ss_pred HHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhc----CCeEe-ecCCeeEEEEecCCcH---HH-----hhceeec
Q 011842 351 PIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDA----GISAM-LNELSSTVVFERPQDE---EF-----VRRWQLA 417 (476)
Q Consensus 351 ~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----g~~~~-~~~~~~iv~f~~~~~~---~~-----~~~~~l~ 417 (476)
.....++++.+ ..-.+..++..++.++|+++|++. +.... ......++.+..++.. .+ .++..+.
T Consensus 304 ~aaa~a~l~~~--~~~~~l~~~~~~~g~~l~~~l~~l~~~~~~~~~~vrg~Gl~~~i~l~~~~~~~~l~~~~~~~Gv~~~ 381 (425)
T PRK09264 304 FVTATAALEEY--WSDDAFEKEVKAKGELVRERLEEIAAKYPGLGAEVRGRGMMQGIDFGDGELAGKIAAEAFENGLIIE 381 (425)
T ss_pred HHHHHHHHHHH--HhhhHHHHHHHHHHHHHHHHHHHHHHhCCCceecceecccEEEEEecChHHHHHHHHHHHHCCCEEe
Confidence 22222334211 111346677777788888877653 21111 1112233344443321 12 1233332
Q ss_pred cc---CCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhc
Q 011842 418 CQ---GNIAHVVVMPNVTIDKLDDFLNELIENRSTWYED 453 (476)
Q Consensus 418 ~~---~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~~~ 453 (476)
.. ...+|++....+|+++|+.+++.|.++.+.+.+.
T Consensus 382 ~~~~~~~~lr~~p~l~~t~~ei~~~~~~l~~~l~~~~~~ 420 (425)
T PRK09264 382 TSGPEDEVVKLLPPLTIDEEELEEGLDILEEAVAEVLAE 420 (425)
T ss_pred ccCCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence 22 3677877777799999999999999998876543
No 327
>PRK07046 aminotransferase; Validated
Probab=99.47 E-value=4e-11 Score=125.18 Aligned_cols=288 Identities=14% Similarity=0.028 Sum_probs=164.3
Q ss_pred HHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHH-HHH-HHc-----------
Q 011842 138 RQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVF-KAA-RMY----------- 204 (476)
Q Consensus 138 ~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~-~~~-~~~----------- 204 (476)
.+.+.++.+.+.++++++ ...|+++||+|+..|++.||....+..|+.-+.+|..+. ... ...
T Consensus 114 ~~~~~~lAe~l~~~~~~~----~v~F~nSGtEA~e~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~ 189 (453)
T PRK07046 114 SEDAAWVGEELARRFGLP----YWQVATTATDANRFVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLL 189 (453)
T ss_pred CHHHHHHHHHHHHHhCCC----EEEEECCHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCC
Confidence 377788888898888653 389999999999999999998645556665444333321 111 100
Q ss_pred CC------eEEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC----HHHHHHHHHHhCCCCCceEEEE
Q 011842 205 RM------ECVKVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD----LDLVIQTLEESGFTQDRFYIHC 274 (476)
Q Consensus 205 G~------~v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~----l~~I~~ia~~~g~~~~~~~lhv 274 (476)
|. .+..+|.+ |++.|++.+.. +....|++.-.....|.+.| ++++.++|++||+ ++++
T Consensus 190 g~~~~~~~~~~~~~~n-----d~~~l~~~l~~--~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~-----llI~ 257 (453)
T PRK07046 190 GQVHDLTATTRVVEFN-----DLAALEAALAD--GDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGT-----LLVI 257 (453)
T ss_pred CCCccccCceEeeCCC-----CHHHHHHHhCC--CCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCC-----EEEE
Confidence 11 12223322 88999998853 33456666544555566655 8999999999999 9999
Q ss_pred ecCcccccccccccCCCCCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCc-cccCCCCCcccCCCCChhHHH
Q 011842 275 DGALFGLMMPFVKKAPKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNV-EYLASRDATIMGSRNGHAPIF 353 (476)
Q Consensus 275 D~a~~g~~~~~~~~~~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~-~yl~~~~~~~~~sr~~~~~l~ 353 (476)
|+++.......... ..+.. ..|.+++ .|.++.++++|+++.++++.+.+.... .+..+ .....+|-++ .++.
T Consensus 258 DEV~tfr~g~Gg~~-~~~gv--~PDi~t~--gK~lggG~Pi~av~g~~~i~~~~~~~~~~~~~~-~~~~~~T~~g-npl~ 330 (453)
T PRK07046 258 DETHTISSGPGGYT-RAHGL--EPDFLVV--GKPIAGGVPCAVYGFSAELAERAQAAKASAPPG-HSGIGTTLSA-NALA 330 (453)
T ss_pred EccccCccCCcchh-HHhCC--Cccceee--hhhhcCCCcceeeeehHHHHHHHhhccccCCCC-CceeCCCCcc-cHHH
Confidence 99985111111111 11211 2688775 599988899999999998876653210 00000 0011122221 2344
Q ss_pred HHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHh----cCCeE-eecCCe-eEEEEecCC-----------cHHHh-----
Q 011842 354 LWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLD----AGISA-MLNELS-STVVFERPQ-----------DEEFV----- 411 (476)
Q Consensus 354 ~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~g~~~-~~~~~~-~iv~f~~~~-----------~~~~~----- 411 (476)
..++++.+..-.-++..++..++.++|+++|++ .++.. +...++ ..+.|..+. +....
T Consensus 331 ~aa~~a~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (453)
T PRK07046 331 MAAMRATLAEVMTEAAYAHMLALAARLAAGLRAVIARHGLPWHVTRVGARVEFQFAPTPPRNGAEAAAALDPELEAALHL 410 (453)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCcEEEEEEeCCCCCCHHHHhcccCHHHHHHHHH
Confidence 444444332111123466666777777777764 44332 222222 222232111 11111
Q ss_pred ----hceeecccCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 011842 412 ----RRWQLACQGNIAHVVVMPNVTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 412 ----~~~~l~~~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~ 450 (476)
+++.+...++.++ ++|.+|++|||.++++++++.+++
T Consensus 411 ~~~~~Gv~~~~~~~~~~--~~p~~t~~did~~~~~~~~~l~~~ 451 (453)
T PRK07046 411 YLLNRGVLITPFHNMML--VCPATTAADVDRLVAAFDACLGEL 451 (453)
T ss_pred HHHHCCCEEecccCcEE--EeCCCCHHHHHHHHHHHHHHHHHH
Confidence 2222222233344 445699999999999999988765
No 328
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.47 E-value=1e-10 Score=121.46 Aligned_cols=287 Identities=14% Similarity=0.085 Sum_probs=166.8
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCC-chHHHHHHHHcCC-----------
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRES-HYSVFKAARMYRM----------- 206 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~-H~S~~~~~~~~G~----------- 206 (476)
+.+.++.+.+.++..... ....+|+++||+|+-.|+..+|....+..|+.-+.+ |....-+..+.|.
T Consensus 83 ~~~~~la~~l~~~~p~~~-~~~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~ 161 (421)
T PRK09792 83 ESYVTLAEKINALAPVSG-QAKTAFFTTGAEAVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPF 161 (421)
T ss_pred HHHHHHHHHHHHhCCCCC-CceEEEeCChHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCC
Confidence 555667777877764221 124889999999999999999975344455554444 4332222222221
Q ss_pred --eEEEEeCC--CCCc---cCHHHHHHHHHcC--CCCcEEEEEeeCCCcccccc-C---HHHHHHHHHHhCCCCCceEEE
Q 011842 207 --ECVKVDCL--ISGE---IDCADFKAKLLQN--KDKPAIINVNIGTTVKGAVD-D---LDLVIQTLEESGFTQDRFYIH 273 (476)
Q Consensus 207 --~v~~v~~~--~~g~---~D~~~Le~~l~~~--~~~p~~vv~t~gtt~tG~id-~---l~~I~~ia~~~g~~~~~~~lh 273 (476)
.+..+|.. .++. -|++.+++.+.+. .+.+..|++.-..++.|... | +++|.++|++||+ +++
T Consensus 162 ~~~~~~v~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~-----llI 236 (421)
T PRK09792 162 PGSVYHVPYPSDLHGISTQDSLDAIERLFKSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGI-----VMI 236 (421)
T ss_pred CCCcEEcCCCcccccccHHHHHHHHHHHHHhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCC-----EEE
Confidence 13333432 1111 1347888888742 34456677765577778654 5 9999999999999 999
Q ss_pred EecCcccccccccccCCCCCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHH
Q 011842 274 CDGALFGLMMPFVKKAPKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIF 353 (476)
Q Consensus 274 vD~a~~g~~~~~~~~~~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~ 353 (476)
+|+++.++... .+....-.+....|.+++ .|.++.++++|+++++.++.+.+... .+ ..|+.+. ++.
T Consensus 237 ~DEv~tg~gr~-G~~~a~~~~~~~pDi~t~--gK~l~~G~pigav~~~~~i~~~~~~~-~~----~~T~~gn-----pl~ 303 (421)
T PRK09792 237 ADEVQSGFART-GKLFAMDHYADKPDLMTM--AKSLAGGMPLSGVVGNANIMDAPAPG-GL----GGTYAGN-----PLA 303 (421)
T ss_pred EeccccCCCCC-CchhHHHhcCCCCcEEEe--ehhhcCCCceEEEEEcHHHHhccCCC-Cc----CCCCCCC-----HHH
Confidence 99999875332 111110011123675544 59998889999999998876655321 11 1122222 344
Q ss_pred HH---HHHHHhChhcHHHHHHHHHHHHHHHHHHHHhc----CCeEeecCC-eeEEEEecCCc----------HHH-----
Q 011842 354 LW---YTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDA----GISAMLNEL-SSTVVFERPQD----------EEF----- 410 (476)
Q Consensus 354 ~~---~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----g~~~~~~~~-~~iv~f~~~~~----------~~~----- 410 (476)
+. +.++.+... +.+++..++.+++.+.|++. +... ...+ ..++.+..+++ ..+
T Consensus 304 ~aaa~a~l~~l~~~---~~~~~~~~~g~~l~~~l~~l~~~~p~v~-~vrG~Gl~~~ie~~~~~~~~~~~~~~~~l~~~~~ 379 (421)
T PRK09792 304 VAAAHAVLNIIDKE---SLCERANQLGQRLKNTLIDAKESVPAIA-AVRGLGSMIAAEFNDPQTGEPSAAIAQKIQQRAL 379 (421)
T ss_pred HHHHHHHHHHHHhh---hHHHHHHHHHHHHHHHHHHHHHhCCCcc-eecccceEEEEEecCCccCCcchHHHHHHHHHHH
Confidence 44 344444222 45666667777777776653 3211 1122 22333332211 111
Q ss_pred hhceeecc---cCCEEEEEEcCCCCHHHHHHHHHHHHHHHH
Q 011842 411 VRRWQLAC---QGNIAHVVVMPNVTIDKLDDFLNELIENRS 448 (476)
Q Consensus 411 ~~~~~l~~---~~~~lRv~~~~~~T~edid~~~~~l~~~~~ 448 (476)
.+++.+.. .++.+|+.....+|+++|++++++|.++.+
T Consensus 380 ~~Gv~i~~~g~~~~~irl~P~l~i~~~ei~~~~~~l~~~l~ 420 (421)
T PRK09792 380 AQGLLLLTCGAYGNVIRFLYPLTIPDAQFDAAMKILQDALS 420 (421)
T ss_pred HCCcEEeecCCCCCEEEEeCCCcCCHHHHHHHHHHHHHHHh
Confidence 13333322 247889888888999999999999988753
No 329
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.47 E-value=8.9e-11 Score=122.63 Aligned_cols=289 Identities=14% Similarity=0.066 Sum_probs=165.1
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHH-HHHHHcCC-----------
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVF-KAARMYRM----------- 206 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~-~~~~~~G~----------- 206 (476)
+...++.+++.+++.... ....+|+++|++|+..|+..+|....+..|+.-+.+|..+. .+..+.+.
T Consensus 99 ~~~~~la~~l~~~~p~~~-~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~ 177 (443)
T PRK06058 99 EGYVAVAEQLNRLTPGDH-EKRSALFNSGAEAVENAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPF 177 (443)
T ss_pred HHHHHHHHHHHHhCCCCC-CCEEEEeCCcHHHHHHHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCcccccccCCC
Confidence 666678888888775321 12488999999999999999987544556666555544433 33322221
Q ss_pred --eEEEEeCCCCCc------cC--------HHHHHHHHHcCCCCcEEEEEeeCCCccccccC----HHHHHHHHHHhCCC
Q 011842 207 --ECVKVDCLISGE------ID--------CADFKAKLLQNKDKPAIINVNIGTTVKGAVDD----LDLVIQTLEESGFT 266 (476)
Q Consensus 207 --~v~~v~~~~~g~------~D--------~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~----l~~I~~ia~~~g~~ 266 (476)
.+..+|.....+ .+ .+.|++.+. ++....|++.-.....|.+.| +++|.++|++||+
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gi- 254 (443)
T PRK06058 178 APEVYRAPMSYPYRDPKGLATDGEEAAARAITVIEKQVG--ADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGV- 254 (443)
T ss_pred CCCceEcCCCcccccccccccchHHHHHHHHHHHHHhhC--CCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCC-
Confidence 123333211000 11 122233322 233455655433444455544 9999999999999
Q ss_pred CCceEEEEecCcccccccccccCC-CCCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCC
Q 011842 267 QDRFYIHCDGALFGLMMPFVKKAP-KVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGS 345 (476)
Q Consensus 267 ~~~~~lhvD~a~~g~~~~~~~~~~-~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~s 345 (476)
++++|+++.|+......... .+.. ..|.++++ |.++.++++|+++.++++.+.+... .+ ..|+.+
T Consensus 255 ----llI~DEV~tGfgRtG~~fa~~~~gv--~PDiv~~g--K~l~~G~Pi~av~~~~~i~~~~~~~-~~----~~T~~g- 320 (443)
T PRK06058 255 ----VFIADEVQTGFARTGAWFACEHEGI--VPDLITTA--KGIAGGLPLSAVTGRAEIMDAPHPG-GL----GGTYGG- 320 (443)
T ss_pred ----EEEEeccccCCCcChhhhHHHhcCC--CCCEEEEc--ccccCCCccEEEEEcHHHHhhccCC-CC----CCCCCC-
Confidence 99999999765321111000 0111 25888775 9888889999999999877655321 11 112222
Q ss_pred CCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhc----CCeE-eecCCeeE-EEEecC----CcHHH-----
Q 011842 346 RNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDA----GISA-MLNELSST-VVFERP----QDEEF----- 410 (476)
Q Consensus 346 r~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----g~~~-~~~~~~~i-v~f~~~----~~~~~----- 410 (476)
.++.+.++++.+..-.-.+..++..++.++|.++|++. +... +...+..+ +.|..+ .+.++
T Consensus 321 ----npl~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G~~~~i~~~~~~~~~~~~~~~~~l~ 396 (443)
T PRK06058 321 ----NPVACAAALAAIETIEEDDLVARARQIEALMTDRLRALAAEDDRIGDVRGRGAMIAIELVKPGTTEPDAELTKALA 396 (443)
T ss_pred ----CHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhCCcEEeeeccceEEEEEEecCCCCCCcHHHHHHHH
Confidence 23445555544421111346677777888888888773 3211 22222222 223211 11111
Q ss_pred ----hhceeecc-c--CCEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Q 011842 411 ----VRRWQLAC-Q--GNIAHVVVMPNVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 411 ----~~~~~l~~-~--~~~lRv~~~~~~T~edid~~~~~l~~~~~~ 449 (476)
.+++.+.. . ++.+|+.....+|+++||.++++|+++.++
T Consensus 397 ~~~~~~Gv~~~~~~~~~~~lr~~Ppl~~t~~~i~~~~~~l~~~l~~ 442 (443)
T PRK06058 397 AAAHAAGVIVLTCGTYGNVIRLLPPLVIGDELLREGLDVLEAALAD 442 (443)
T ss_pred HHHHHCCeEEeccCCCCCEEEEECCCccCHHHHHHHHHHHHHHHHh
Confidence 12333322 2 478999888889999999999999988754
No 330
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.47 E-value=1.2e-10 Score=118.91 Aligned_cols=288 Identities=17% Similarity=0.125 Sum_probs=179.8
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEE-ecCCCchHHHHHHHHcCC-----------
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILY-ASRESHYSVFKAARMYRM----------- 206 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl-~s~~~H~S~~~~~~~~G~----------- 206 (476)
+...++.+.|.+++.-+ .....+|+++||+||=.|+..||....+..|| ....-|..-..+..+.|-
T Consensus 99 e~~v~~ae~L~~~~p~~-~~~~~~f~~sGaeA~E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~ 177 (447)
T COG0160 99 EPYVELAEKLTALAPGS-GLKKVFFGNSGAEAVEAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPL 177 (447)
T ss_pred hhHHHHHHHHHHhCCcc-cCCeEEecCCcHHHHHHHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCC
Confidence 55556667777766542 12238899999999999999999875555455 444445443333333321
Q ss_pred --eEEEEeCCCCC------------ccCHHHHHHHHHcC---CCCcEEEEEeeCCCccccccC----HHHHHHHHHHhCC
Q 011842 207 --ECVKVDCLISG------------EIDCADFKAKLLQN---KDKPAIINVNIGTTVKGAVDD----LDLVIQTLEESGF 265 (476)
Q Consensus 207 --~v~~v~~~~~g------------~~D~~~Le~~l~~~---~~~p~~vv~t~gtt~tG~id~----l~~I~~ia~~~g~ 265 (476)
.+..+|..... .-..+.++++|... ...|..+++....+.-|.+.| ++++.++|++||+
T Consensus 178 ~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gi 257 (447)
T COG0160 178 PPGVYHVPYPNPYRCPFGIGGEECGDDALEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGI 257 (447)
T ss_pred CCCeEEecCCccccCcccCchhhhhHHHHHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCC
Confidence 25566553211 22345566666543 346778888777888888865 8999999999999
Q ss_pred CCCceEEEEecCcccccccccccCCCCCCc--c-cccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcc
Q 011842 266 TQDRFYIHCDGALFGLMMPFVKKAPKVSFK--K-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATI 342 (476)
Q Consensus 266 ~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~--~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~ 342 (476)
++++|++|.|+---+ + -|.+. . ..|++|++ |.++.+.+.|.++.|.++.+.......| ++
T Consensus 258 -----llI~DEVQtG~GRTG-~---~fa~E~~gv~PDivt~a--K~ig~G~Pl~avv~r~ei~~~~~g~~~~------Tf 320 (447)
T COG0160 258 -----LLIADEVQTGFGRTG-K---MFAFEHFGVEPDIVTLA--KSLGGGLPLSAVVGRAEIMDWPPGGHGG------TF 320 (447)
T ss_pred -----EEEEeccccCCCccc-c---chhhhhcCCCCCEEEec--ccccCCCceeEEeccHHhcccCCcccCC------CC
Confidence 999999998753221 1 12221 1 27999877 9999999999999999876533222222 22
Q ss_pred cCCCCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcC--CeEee---cCCeeE-EEEecC-----CcHH--
Q 011842 343 MGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAG--ISAML---NELSST-VVFERP-----QDEE-- 409 (476)
Q Consensus 343 ~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g--~~~~~---~~~~~i-v~f~~~-----~~~~-- 409 (476)
.|. +++..+++..+..-.-++..++..++-+||+++|.++- ...+. ..+..+ |-|..+ ++.+
T Consensus 321 ~GN-----pva~Aaa~AvL~vie~e~L~~~a~~~G~~l~~~L~~l~~~~~~IgdVRG~Glm~giE~v~d~~t~~p~~~~~ 395 (447)
T COG0160 321 GGN-----PVACAAALAVLDVIEEENLLERAAELGEYLRDRLEELQEKHPLIGDVRGLGLMIGVELVKDRDTKEPDAELA 395 (447)
T ss_pred CcC-----HHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHhhcCceecccccceEEEEEEecCCCCCCCCHHHH
Confidence 222 34444444433211123577777888888888887641 21221 112211 223322 1111
Q ss_pred -------Hhhceee-ccc--CCEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Q 011842 410 -------FVRRWQL-ACQ--GNIAHVVVMPNVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 410 -------~~~~~~l-~~~--~~~lRv~~~~~~T~edid~~~~~l~~~~~~ 449 (476)
+.+++.+ .|. ++.+|+..--..|+|++|+++++|.+++++
T Consensus 396 ~~i~~~~~~~Glil~~~G~~~nviRi~PPL~is~e~~d~~l~il~~al~~ 445 (447)
T COG0160 396 AKIVARAFERGLLLLTCGPHGNVLRILPPLTISDEELDEGLDILEEALKE 445 (447)
T ss_pred HHHHHHHHHcCCEEeccCCCCcEEEEeCCcccCHHHHHHHHHHHHHHHHh
Confidence 2234333 555 799999998889999999999999998765
No 331
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.46 E-value=2e-12 Score=133.75 Aligned_cols=236 Identities=16% Similarity=0.142 Sum_probs=164.4
Q ss_pred HHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCC--C--
Q 011842 140 FEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCL--I-- 215 (476)
Q Consensus 140 le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~--~-- 215 (476)
.-+++.+..|+.+|.+.. -++++|.|.||...+++... |||.|++++..|-|+..+..+.|+..+++... +
T Consensus 71 ~i~eAqe~aA~~fgAd~t---yFvvNGTS~ank~vi~a~~~--~GD~VLvdRN~HKSi~~glilaGa~Pvyl~p~~np~~ 145 (557)
T COG1982 71 PIKEAQELAARVFGADHT---YFVVNGTSTANKAVINAVLT--PGDKVLVDRNCHKSIHHGLILAGATPVYLEPSRNPLY 145 (557)
T ss_pred cHHHHHHHHHHHhCCCce---EEEECCccHHHHHHHHhhcC--CCCEEEecCCccHHHHHHHHHcCCceEEecCCCCccc
Confidence 445677888999999864 67788999999999988877 99999999999999999999999998888654 3
Q ss_pred --CCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCC
Q 011842 216 --SGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVS 293 (476)
Q Consensus 216 --~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~ 293 (476)
-|.++.+.+++++.++...-.+++++. .|+.|.+-++++|.+.+.++++ |+.+|.+|+........ .+...
T Consensus 146 gi~ggI~~~~~~~~l~~~~~~~k~~vitn-pTYdGv~~n~~~i~~~~~~~~a-----~v~~deah~~~~~~~~~-l~~~~ 218 (557)
T COG1982 146 GIIGGIPLETFKEALLAHPDAEKLAVITN-PTYDGVCYNLRKIVELLHHYGA-----WVLYDEAHPAHFDFSPM-LPESA 218 (557)
T ss_pred cccCCCCHHHHHHHHHhChhhheeEEEec-CccceEeecHHHHHHHHhhcCc-----eEEhhhcCccccccccc-Ccchh
Confidence 267999999999887644313566654 5688999999999999999999 99999999765432211 11122
Q ss_pred CcccccEEEEcCCCCCCCCCCceeEEeehh-hh--hhhcCCccccCCCCCcccCCCC--ChhHHHHHH-HHHHhChhcHH
Q 011842 294 FKKPIGSVSVSGHKFVGCPMPCGVQITRME-HI--NVLSSNVEYLASRDATIMGSRN--GHAPIFLWY-TLNRKGYKGFQ 367 (476)
Q Consensus 294 ~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~-~~--~~l~~~~~yl~~~~~~~~~sr~--~~~~l~~~~-~l~~~g~~g~~ 367 (476)
....+|+.+-|.||.+++-..++++.+++. .+ +.+........+ .|++ ..+++.... .+...|..-.+
T Consensus 219 ~~~~~~~~tqS~HK~l~alSQaS~iHv~~~~~~~~~r~nea~~~h~S------TSPsY~l~ASlD~Ar~~~~~~G~~l~~ 292 (557)
T COG1982 219 LNGGADFVTQSTHKLLAALSQASMIHVKDGRAVNHERFNEALMMHQS------TSPSYPLMASLDVARMQEGNAGRELWQ 292 (557)
T ss_pred hhcCceEEEechhhhhhhhhhhHHHhhCCCccCCHHHHHHHHHHHcc------CCchHHHHHHHHHHHHhhhhhhHHHHH
Confidence 223489999999999999888999998862 11 111110011111 1110 011222211 11122333344
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCeEee
Q 011842 368 KEVQKCLRNAHYLKDRLLDAGISAML 393 (476)
Q Consensus 368 ~~~~~~~~~a~~l~~~L~~~g~~~~~ 393 (476)
+.+++..+.++.+++..++.+++.+.
T Consensus 293 ~~~~~~i~~r~~~~~~~~~~~~~~~~ 318 (557)
T COG1982 293 EVIDEAIDFRKALRRLINEIGFFPVL 318 (557)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCeeec
Confidence 55788888899999988888755443
No 332
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=99.46 E-value=1.8e-12 Score=128.54 Aligned_cols=292 Identities=16% Similarity=0.089 Sum_probs=186.7
Q ss_pred HHHHHHHHHHHHcCCCCCcccEEEcCCchh-HHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCC--CC
Q 011842 140 FEVGVLDWFARLWELENNEYWGYITNCGTE-GNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCL--IS 216 (476)
Q Consensus 140 le~~~~~~la~l~g~~~~~~~g~~t~ggt~-An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~--~~ 216 (476)
+-..+...+-++.|+..- ...++++.+|. ++.+.+++.+.+.....|+.+...|+|-.+++..+|++++.||.. ++
T Consensus 57 ltn~l~~d~~~~~G~~~~-~~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~kai~~AGl~~~vV~~~~~~d 135 (389)
T PF05889_consen 57 LTNSLVLDALRLAGLRSV-KSCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCFKAIERAGLEPVVVENVLEGD 135 (389)
T ss_dssp HHHHHHHHHHHHTTHTTH-CEEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHHHHHHHHTT-EEEEE-EEEETT
T ss_pred HHHHHHHHHHHHcCCccc-cceEEEecccccHHHHHHHHHhcccCCceEEEeeccccchHHHHHhcCCeEEEeeccCCCC
Confidence 334444455567898732 23677777654 455667777644456789999999999999999999999999863 22
Q ss_pred -CccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC-HHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCC
Q 011842 217 -GEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD-LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSF 294 (476)
Q Consensus 217 -g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~-l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~ 294 (476)
-..|++.+|+.+++.+..+.+.++|+.+-..+-..| +++|+++|++||+ ..++.+|||.-.-....... -..
T Consensus 136 ~l~td~~~ie~~i~~~G~~~iLcvltttscfapr~~D~i~~IakiC~~~~I-----PhlvNnAYgvQ~~~~~~~i~-~a~ 209 (389)
T PF05889_consen 136 ELITDLEAIEAKIEELGADNILCVLTTTSCFAPRLPDDIEEIAKICKEYDI-----PHLVNNAYGVQSSKCMHLIQ-QAW 209 (389)
T ss_dssp EEEEHHHHHHHHHHHHCGGGEEEEEEESSTTTTB----HHHHHHHHHHHT-------EEEEGTTTTT-HHHHHHHH-HHH
T ss_pred eeeccHHHHHHHHHHhCCCCeEEEEEecCccCCCCCccHHHHHHHHHHcCC-----ceEEccchhhhHHHHHHHHH-HHH
Confidence 346889999999877767788888888777777755 9999999999999 99999999762110000000 001
Q ss_pred c-ccccEEEEcCCCCCCCCCCceeEEeehh-hhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHHH
Q 011842 295 K-KPIGSVSVSGHKFVGCPMPCGVQITRME-HINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQK 372 (476)
Q Consensus 295 ~-~~~Dsi~~s~hK~l~~p~~~G~l~~~~~-~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~ 372 (476)
. .++|.+.-+.-|-+++|.|-+.+...++ .+..+. ..| .+-....+.+.+...+..+|..++...+..
T Consensus 210 ~~GRvda~vqS~dkNF~VPvGgai~As~~~~~i~~vs--~~Y--------pGRas~sp~ld~~itLl~LG~~g~~~ll~~ 279 (389)
T PF05889_consen 210 RVGRVDAFVQSTDKNFMVPVGGAIMASFDPSGILAVS--KEY--------PGRASASPSLDLFITLLSLGCTGYGALLKE 279 (389)
T ss_dssp HHSTCSEEEEEHHHHHCEESSHEEEEESSHHHHHHHH--HTS--------HSHBTSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcCCcceeeeecCCCEEecCCCcEEEecCHHHHHHHH--HHh--------hhhhhcccchHHHHHHHHHhhhHHHHHHHH
Confidence 1 1378888888888888888888887765 444432 223 222223456778888999999999999999
Q ss_pred HHHHHHHHHHHHHhc----CCeEeecC-CeeEEEEecCC-------c-HHH-----hhce---e-eccc-----------
Q 011842 373 CLRNAHYLKDRLLDA----GISAMLNE-LSSTVVFERPQ-------D-EEF-----VRRW---Q-LACQ----------- 419 (476)
Q Consensus 373 ~~~~a~~l~~~L~~~----g~~~~~~~-~~~iv~f~~~~-------~-~~~-----~~~~---~-l~~~----------- 419 (476)
..++-.++.++|++. +-.++..| ....+.|..+. + ..+ .++. + +...
T Consensus 280 r~~~f~~l~erl~~~aee~~e~ll~~p~N~is~a~tl~~l~~~~~k~~~~lgs~Lf~R~VsG~RvV~~~~~~~tsh~~~y 359 (389)
T PF05889_consen 280 RKASFPYLKERLKKWAEEVGERLLETPRNHISMAFTLDTLYEISQKDGTFLGSMLFKRGVSGIRVVTPGGKKQTSHSSNY 359 (389)
T ss_dssp HHHHHHHHHHHHHHHHHHTTEEBSSSTT-SSEEEEE-TTCCTCCSSHHHHHHHHHHHTTEESSEEEETSSCEEETTSS--
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhcCCCCCCeeEEEECccchhhccchhhhHHHHHHhCCcccceeeccCCCcccccCCCC
Confidence 999999999998773 42222222 23334444331 1 011 1111 1 1100
Q ss_pred -CCEEEEEEcCCCCHHHHHHHHHHHHHHHH
Q 011842 420 -GNIAHVVVMPNVTIDKLDDFLNELIENRS 448 (476)
Q Consensus 420 -~~~lRv~~~~~~T~edid~~~~~l~~~~~ 448 (476)
..++-+......|+||||.|++.|+++.+
T Consensus 360 p~~Ylt~AsaiG~~~eevd~~v~rL~k~i~ 389 (389)
T PF05889_consen 360 PCPYLTAASAIGMTREEVDYFVKRLDKIIK 389 (389)
T ss_dssp SSSEEEEEE-TT--HHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHhCCCHHHHHHHHHHHHHHhC
Confidence 14566667788999999999999998864
No 333
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.46 E-value=1.5e-10 Score=120.00 Aligned_cols=292 Identities=14% Similarity=0.062 Sum_probs=166.1
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhh-----CCCcEEEecCCC-chHHHHHHHHcCC------
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREV-----FPDGILYASRES-HYSVFKAARMYRM------ 206 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~-----~p~~~Vl~s~~~-H~S~~~~~~~~G~------ 206 (476)
+...++.+.++++.+-+. ...+|+++||+|+-.|+..+|.. .++..|+.-+.+ |....-+..+.+-
T Consensus 86 ~~~~~la~~L~~~~p~~~--~~v~f~~SGsEAve~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~ 163 (428)
T PRK07986 86 PPAIELCRKLVAMTPQPL--ECVFLADSGSVAVEVAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHS 163 (428)
T ss_pred HHHHHHHHHHHhhCCCCc--CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhh
Confidence 555677788888764322 24899999999999999999864 123455544444 4322222222121
Q ss_pred -------eEEEEeCCCC------CccCHHHHHHHHHcCCCCcEEEEEeeCCCccccc-----cCHHHHHHHHHHhCCCCC
Q 011842 207 -------ECVKVDCLIS------GEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAV-----DDLDLVIQTLEESGFTQD 268 (476)
Q Consensus 207 -------~v~~v~~~~~------g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~i-----d~l~~I~~ia~~~g~~~~ 268 (476)
.+..+|.... ..-|+++|++.+.........|++.......|.+ ..+++|.++|++||+
T Consensus 164 ~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~--- 240 (428)
T PRK07986 164 LYKGYLPENLFAPAPQSRFDGEWDERDIAPFARLMAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGI--- 240 (428)
T ss_pred ccCCCCCCCEEECCCCcccchhhHHHHHHHHHHHHHhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCC---
Confidence 1223332110 0236788888887544444455554322333332 339999999999999
Q ss_pred ceEEEEecCccccccccccc-CCCCCCcccccEEEEcCCCCCCCC-CCceeEEeehhhhhhhcCCc--cccCCCCCcccC
Q 011842 269 RFYIHCDGALFGLMMPFVKK-APKVSFKKPIGSVSVSGHKFVGCP-MPCGVQITRMEHINVLSSNV--EYLASRDATIMG 344 (476)
Q Consensus 269 ~~~lhvD~a~~g~~~~~~~~-~~~~~~~~~~Dsi~~s~hK~l~~p-~~~G~l~~~~~~~~~l~~~~--~yl~~~~~~~~~ 344 (476)
++++|+++.|+ ....+. ....... ..|+++ +.|.++.+ .++|++++++++.+.+.... .+.. ..|+.+
T Consensus 241 --lLI~DEv~tG~-GrtG~~fa~~~~gv-~PDi~t--~gK~l~gG~~p~~av~~~~~i~~~~~~~~~~~~~~--~~T~~g 312 (428)
T PRK07986 241 --LLIADEIATGF-GRTGKLFACEHAGI-APDILC--LGKALTGGTMTLSATLTTREVAETISNGEAGCFMH--GPTFMG 312 (428)
T ss_pred --EEEEeccccCC-ccCCCeeeecccCC-CCCEEE--echhhhCCcccCcchhchHHHHHHhhcCCCCcccc--CCCCCc
Confidence 99999999654 211111 0001111 268886 45888877 48899999988876664311 1111 122222
Q ss_pred CCCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcC-CeEee--cCCeeEEEEec--CCc-HHH-----hhc
Q 011842 345 SRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAG-ISAML--NELSSTVVFER--PQD-EEF-----VRR 413 (476)
Q Consensus 345 sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g-~~~~~--~~~~~iv~f~~--~~~-~~~-----~~~ 413 (476)
.+ .......++++.+..+ +..++..++.++|++.|++.. ...+. .-...++.+.. +.. ..+ .++
T Consensus 313 ~p--~~~aaa~a~L~~i~~~---~~~~~~~~~g~~l~~~l~~l~~~~~i~~vRg~Gl~~~ve~~~~~~~~~~~~~l~~~G 387 (428)
T PRK07986 313 NP--LACAVANASLSLLESG---DWQQQVAAIEAQLREELAPLRDAPMVADVRVLGAIGVVETTRPVNMAALQRFFVEQG 387 (428)
T ss_pred CH--HHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHhcCCCEEeEeccceEEEEEeCCcccHHHHHHHHHHCC
Confidence 21 1222233344444322 357777788888888887741 11111 11122333332 211 122 234
Q ss_pred eeecccCCEEEEEEcCCCCHHHHHHHHHHHHHHHH
Q 011842 414 WQLACQGNIAHVVVMPNVTIDKLDDFLNELIENRS 448 (476)
Q Consensus 414 ~~l~~~~~~lRv~~~~~~T~edid~~~~~l~~~~~ 448 (476)
+.+...++.+|+.....+|++||+.++++|.++.+
T Consensus 388 l~~~~~g~~i~~~Ppl~it~~ei~~~~~~l~~~l~ 422 (428)
T PRK07986 388 VWIRPFGKLIYLMPPYIILPEQLQRLTAAVNRAVQ 422 (428)
T ss_pred cEEEecCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Confidence 44444467888888888999999999999998864
No 334
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.46 E-value=1.5e-10 Score=119.73 Aligned_cols=290 Identities=12% Similarity=0.046 Sum_probs=164.5
Q ss_pred HHHHHHHHHHHHHcCCCCC-cccEEE-cCCchhHHHHHHHHHHhhCCCcEEEecCCCchHH-HHHHHHcCC---------
Q 011842 139 QFEVGVLDWFARLWELENN-EYWGYI-TNCGTEGNLHGILVGREVFPDGILYASRESHYSV-FKAARMYRM--------- 206 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~-~~~g~~-t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~-~~~~~~~G~--------- 206 (476)
+...++.+.+++++..+.. .....| +++|++|+-.|++.+|....+..|+.-+.+|... .-+....|-
T Consensus 78 ~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~ 157 (412)
T TIGR02407 78 EAKREFLETFNEIILKPRGLDYKVQFPGPTGTNAVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGV 157 (412)
T ss_pred HHHHHHHHHHHHhccCccCCCceEEEeCCCchHHHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCCCC
Confidence 5556677777776422211 112445 5899999999999999764455666555544333 222222221
Q ss_pred ---eEEEEeCCCCC---ccCHHHHHHHHHcCC---CCcEEEEEeeCCCccccc----cCHHHHHHHHHHhCCCCCceEEE
Q 011842 207 ---ECVKVDCLISG---EIDCADFKAKLLQNK---DKPAIINVNIGTTVKGAV----DDLDLVIQTLEESGFTQDRFYIH 273 (476)
Q Consensus 207 ---~v~~v~~~~~g---~~D~~~Le~~l~~~~---~~p~~vv~t~gtt~tG~i----d~l~~I~~ia~~~g~~~~~~~lh 273 (476)
.+..+|..... .-+++.+++.+.+.. +.+..|++.-..+..|.+ +-+++|.++|++||+ +++
T Consensus 158 ~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~-----llI 232 (412)
T TIGR02407 158 PLSNVSRMPYDGYLGGDVDTIAYFEKLLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDI-----LLI 232 (412)
T ss_pred CCCCeEECCCCCccccchhHHHHHHHHHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCC-----EEE
Confidence 23444432100 124777888887542 234566665446666764 238999999999999 999
Q ss_pred EecCcccccccccccC-CCCCCcccccEEEEcCCCCCCC-CCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhH
Q 011842 274 CDGALFGLMMPFVKKA-PKVSFKKPIGSVSVSGHKFVGC-PMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAP 351 (476)
Q Consensus 274 vD~a~~g~~~~~~~~~-~~~~~~~~~Dsi~~s~hK~l~~-p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~ 351 (476)
.|+++.|+--...-.. ..... ..|.++++ |+++. +.++|+++++++. +.+.. ..+ ..++.+.. ...
T Consensus 233 ~DEV~tG~GRtG~~~a~~~~~v--~PDi~~~~--K~lg~~G~pigav~~~~~~-~~~~~-~~~----~~T~~gnp--l~~ 300 (412)
T TIGR02407 233 VDDIQAGCGRTGTFFSFEPAGI--EPDIVCLS--KSISGYGLPLALTLIKPEL-DVWKP-GEH----NGTFRGNN--LAF 300 (412)
T ss_pred EechhhCCCccchhHHhcccCC--CCCEEEec--hhccCCccceeEEEEchhh-hccCC-Ccc----CCCCCccH--HHH
Confidence 9999975421100000 00111 26877655 99987 8899999998775 33321 111 12222221 111
Q ss_pred HHHHHHHHH-hChhcHHHHHHHHHHHHHHHHHHHHh----cC-CeEeecCCeeEEEEecCCc---HHH-----hhceeec
Q 011842 352 IFLWYTLNR-KGYKGFQKEVQKCLRNAHYLKDRLLD----AG-ISAMLNELSSTVVFERPQD---EEF-----VRRWQLA 417 (476)
Q Consensus 352 l~~~~~l~~-~g~~g~~~~~~~~~~~a~~l~~~L~~----~g-~~~~~~~~~~iv~f~~~~~---~~~-----~~~~~l~ 417 (476)
....++++. +.. .+..++..++.++|+++|++ .+ ...-......++.+..++. ..+ .+++.+.
T Consensus 301 aaa~a~l~~~i~~---~~l~~~~~~~g~~l~~~l~~l~~~~~~~~~~vrg~Gl~~~l~l~~~~~~~~~~~~~~~~Gv~v~ 377 (412)
T TIGR02407 301 VTATAALEYYWSD---DAFEKAVQRKSEIIQERLDRIVAEYPELIKQVRGRGLMQGIECGDGDLAGKIAKAAFENGLIIE 377 (412)
T ss_pred HHHHHHHHHHhcc---cHHHHHHHHHHHHHHHHHHHHHhhCCCceEeeecceeEEEEEecChHHHHHHHHHHHHCCCEEe
Confidence 222344543 322 33455566666777777664 33 2111122233444444432 112 2333342
Q ss_pred c---cCCEEEEEEcCCCCHHHHHHHHHHHHHHHH
Q 011842 418 C---QGNIAHVVVMPNVTIDKLDDFLNELIENRS 448 (476)
Q Consensus 418 ~---~~~~lRv~~~~~~T~edid~~~~~l~~~~~ 448 (476)
. .++.+|++....+|++|+|.+++.|+++.+
T Consensus 378 ~~~~~~~~lr~~p~l~~t~~~i~~~~~~l~~~l~ 411 (412)
T TIGR02407 378 TSGPNDEVIKLLPPLTIDEETLQQGLDILEQAVE 411 (412)
T ss_pred ccCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHh
Confidence 2 247899999999999999999999998764
No 335
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.45 E-value=1.2e-10 Score=120.76 Aligned_cols=295 Identities=12% Similarity=0.007 Sum_probs=171.9
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhC-----C-CcEEEecCCC-chHHHHHHHHcCC-----
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVF-----P-DGILYASRES-HYSVFKAARMYRM----- 206 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~-----p-~~~Vl~s~~~-H~S~~~~~~~~G~----- 206 (476)
+.+.++.+.+.+++..+. ...+|+++||+|+-.|+..+|... + +..|+.-..+ |..-.-+..+.|-
T Consensus 87 ~~~~~lae~L~~~~p~~~--~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~ 164 (429)
T PRK06173 87 EPAVELAQKLLEILPPSL--NKIFFADSGSVAVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMH 164 (429)
T ss_pred HHHHHHHHHHHhhCCCCc--CEEEEeCCchHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhh
Confidence 555677777887764222 248999999999999999998641 2 3345544444 4321112111110
Q ss_pred --------eEEEEeCCCC------CccCHHHHHHHHHcCCCCcEEEEEeeC-CCccccccC----HHHHHHHHHHhCCCC
Q 011842 207 --------ECVKVDCLIS------GEIDCADFKAKLLQNKDKPAIINVNIG-TTVKGAVDD----LDLVIQTLEESGFTQ 267 (476)
Q Consensus 207 --------~v~~v~~~~~------g~~D~~~Le~~l~~~~~~p~~vv~t~g-tt~tG~id~----l~~I~~ia~~~g~~~ 267 (476)
.+..+|.... ..-+++.|++.|.........|++.-. ...-|.+.| +++|.++|++||+
T Consensus 165 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~l~~~i~~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~-- 242 (429)
T PRK06173 165 GLFNHSLPVQYFLPQPSIKFGEEWNDEAIEPLQDLLEQKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGV-- 242 (429)
T ss_pred hcccccCCCCeEeCCCCcccchhHHHHHHHHHHHHHHhCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCC--
Confidence 1223332110 112567788888755455556666532 444455532 8999999999999
Q ss_pred CceEEEEecCcccccccccccC--CCCCCcccccEEEEcCCCCCCCCC-CceeEEeehhhhhhhcCCc--cccCCCCCcc
Q 011842 268 DRFYIHCDGALFGLMMPFVKKA--PKVSFKKPIGSVSVSGHKFVGCPM-PCGVQITRMEHINVLSSNV--EYLASRDATI 342 (476)
Q Consensus 268 ~~~~lhvD~a~~g~~~~~~~~~--~~~~~~~~~Dsi~~s~hK~l~~p~-~~G~l~~~~~~~~~l~~~~--~yl~~~~~~~ 342 (476)
++++|++|.|+ ....+.. ..+.. ..|+++ +.|.++.++ .+|.++.++++.+.+.... .+..+ .|+
T Consensus 243 ---llI~DEv~tG~-GrtG~~~a~~~~gv--~PDiv~--~gK~l~gG~~p~~a~~~~~~i~~~~~~~~~~~~~~~--~T~ 312 (429)
T PRK06173 243 ---LLIFDEIATGF-GRTGKLFALEHAGV--VPDIMC--IGKALTGGYLTLSATITTEAIAQTICSGEAKCFMHG--PTF 312 (429)
T ss_pred ---eEEecchhcCC-CcCCcchHHHhcCC--CCCEEE--eehhhhCCccccceEEecHHHHHHHhcCCCCccccC--CCC
Confidence 99999999653 2222110 01111 268777 468887774 7899999988766553211 11111 122
Q ss_pred cCCCCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhc-CCeEeec--CCeeEEEEecCCc---HHH-----h
Q 011842 343 MGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDA-GISAMLN--ELSSTVVFERPQD---EEF-----V 411 (476)
Q Consensus 343 ~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~-g~~~~~~--~~~~iv~f~~~~~---~~~-----~ 411 (476)
.+.. .......++++.+..+ +..++..++.++|++.|++. +...+.. ....++.+....+ ..+ .
T Consensus 313 ~g~p--~~~aaa~a~l~~i~~~---~~~~~~~~~g~~l~~~L~~~~~~~~v~~vRg~Gl~~~iel~~~~~~~~i~~~l~e 387 (429)
T PRK06173 313 MANP--LACAIAAESIRLLLES---PWQQNIQRIEAQLKQELAPAAEFDSVAEVRVLGAIGVVEMKEPVNMATLQPRFVE 387 (429)
T ss_pred CcCH--HHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccceEEEEEeCCcccHHHHHHHHHH
Confidence 2211 1222233444444222 35677788888999998864 2221211 1233444433321 122 2
Q ss_pred hceeecccCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHh
Q 011842 412 RRWQLACQGNIAHVVVMPNVTIDKLDDFLNELIENRSTWYE 452 (476)
Q Consensus 412 ~~~~l~~~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~~ 452 (476)
+++.+...++.+|+.....+|++|||.++++|+++.+..+.
T Consensus 388 ~Gi~v~~~g~~l~~~Ppl~it~~ei~~~~~~l~~~l~~~~~ 428 (429)
T PRK06173 388 HGIWVRPFGKLVYIMPPFIISPDELSQLTSGLLRVLKQEYN 428 (429)
T ss_pred CCeEEEecCCEEEEeCCccCCHHHHHHHHHHHHHHHHHHhc
Confidence 34555555678998888889999999999999999887663
No 336
>PRK07678 aminotransferase; Validated
Probab=99.45 E-value=1.5e-10 Score=121.05 Aligned_cols=295 Identities=12% Similarity=0.085 Sum_probs=165.4
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhC------CCcEEEecCCC-chHHHHHHHHcCC-----
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVF------PDGILYASRES-HYSVFKAARMYRM----- 206 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~------p~~~Vl~s~~~-H~S~~~~~~~~G~----- 206 (476)
+.+.++.+.+.++++.. ...+|+++||+|+..|+..||... .+..|+.-+.+ |....-+....|.
T Consensus 89 ~~~~~lae~l~~~~~~~---~~v~f~~sGseA~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~ 165 (451)
T PRK07678 89 EPAIKLAEKLNEWLGGE---YVIFFSNSGSEANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKY 165 (451)
T ss_pred HHHHHHHHHHHHhCCCC---CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCccccc
Confidence 45566778888877543 248999999999999999998742 23455554444 4332222222221
Q ss_pred -------eEEEEeCCCCCc---------cC---HHHHHHHHHc-CCCCcEEEEEeeCCCccccccC----HHHHHHHHHH
Q 011842 207 -------ECVKVDCLISGE---------ID---CADFKAKLLQ-NKDKPAIINVNIGTTVKGAVDD----LDLVIQTLEE 262 (476)
Q Consensus 207 -------~v~~v~~~~~g~---------~D---~~~Le~~l~~-~~~~p~~vv~t~gtt~tG~id~----l~~I~~ia~~ 262 (476)
.+..+|.....+ .| ++.+++.|+. ..+.+..|++.-....-|.+.| ++++.++|++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~ 245 (451)
T PRK07678 166 KYEPLAPGFLHVPPPDCYRMPGIESEDIYDLECVKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQK 245 (451)
T ss_pred ccCCCCCCCEEeCCCccccccccCChHHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHH
Confidence 223333221111 11 2346777753 2344556666544555566655 8999999999
Q ss_pred hCCCCCceEEEEecCcccccccccc-cCCCCCCcccccEEEEcCCCCCCCC-CCceeEEeehhhhhhhcCCcccc-CCCC
Q 011842 263 SGFTQDRFYIHCDGALFGLMMPFVK-KAPKVSFKKPIGSVSVSGHKFVGCP-MPCGVQITRMEHINVLSSNVEYL-ASRD 339 (476)
Q Consensus 263 ~g~~~~~~~lhvD~a~~g~~~~~~~-~~~~~~~~~~~Dsi~~s~hK~l~~p-~~~G~l~~~~~~~~~l~~~~~yl-~~~~ 339 (476)
||+ ++++|+++.|+-..... ....+.+ ..|.++++ |.++.+ .++|.+++++++.+.+.....+. ....
T Consensus 246 ~g~-----llI~DEV~tGfGRtG~~~~~~~~gv--~PDivt~g--K~lggG~~Pi~av~~~~~i~~~~~~~~~~~~~~h~ 316 (451)
T PRK07678 246 HGA-----LLISDEVICGFGRTGKAFGFMNYGV--KPDIITMA--KGITSAYLPLSATAVKKEIYEAFKGKGEYEHFRHV 316 (451)
T ss_pred cCC-----EEEEeehhhcCCcCchhHHHHhcCC--CCCEEEee--cccccCCcceeEEEEcHHHHHHHhccCcccccccC
Confidence 999 99999999654221100 0011221 27888774 988877 58999999999876664321110 0011
Q ss_pred CcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHh----cCCeEeecCCeeEEEEec--------CCc
Q 011842 340 ATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLD----AGISAMLNELSSTVVFER--------PQD 407 (476)
Q Consensus 340 ~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~g~~~~~~~~~~iv~f~~--------~~~ 407 (476)
.|+.+. ++...++++.+..-.-++..++..++.++|++.|++ .+...-......++.+.. +.+
T Consensus 317 ~T~~gn-----p~~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~l~~~~~~~~~v~~vrg~Gl~~~i~~~~~~~~~~~~~ 391 (451)
T PRK07678 317 NTFGGN-----PAACALALKNLEIMENENLIERSAQLGELLLEQLKEELGEHPLVGDIRGKGLLVGIELVNDKETKEPAD 391 (451)
T ss_pred CCCCcC-----HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEeeceEEEEEEecCCcccCcCc
Confidence 222222 344444443332111123566677777777777754 243211111112222221 111
Q ss_pred HH----H-----hhceeecc-------cCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 011842 408 EE----F-----VRRWQLAC-------QGNIAHVVVMPNVTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 408 ~~----~-----~~~~~l~~-------~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~ 450 (476)
.. + .+++.+.. .++.+|++....+|++|||.++++|.++.+++
T Consensus 392 ~~~a~~i~~~l~~~Gv~~~~~g~~v~~~~~~lrl~Ppl~it~~eid~~~~~l~~~l~~~ 450 (451)
T PRK07678 392 NDKVASVVAACKEKGLIIGKNGDTVAGYNNVLTLSPPLVISSEEIAFIVGTLKTALERI 450 (451)
T ss_pred hHHHHHHHHHHHHCCcEEeecCccccCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHhc
Confidence 11 1 12333322 23678888888889999999999999987653
No 337
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.45 E-value=1.4e-10 Score=121.22 Aligned_cols=294 Identities=11% Similarity=0.009 Sum_probs=169.3
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhh-----C-CCcEEEecCCCchHHH-HHHHHcCC-----
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREV-----F-PDGILYASRESHYSVF-KAARMYRM----- 206 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~-----~-p~~~Vl~s~~~H~S~~-~~~~~~G~----- 206 (476)
+...++.+.++++.+... ...+|+++||+|+-.|+..++.. . .+..|+.-+.+|.... -+..+.|-
T Consensus 97 ~~~~~lAe~L~~~~p~~~--~~v~f~~sGseAve~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~ 174 (453)
T PRK06943 97 EPAIELAERLAALTGGTL--GHAFFASDGASAVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKD 174 (453)
T ss_pred HHHHHHHHHHHHhCCCCC--CEEEEeCCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhc
Confidence 555677788888775332 24899999999999999999653 1 2345555554443322 22222221
Q ss_pred -------eEEEEeCCCC-C-----------ccCHHHHHHHHHcCCCCcEEEEEee-CCCccccccC----HHHHHHHHHH
Q 011842 207 -------ECVKVDCLIS-G-----------EIDCADFKAKLLQNKDKPAIINVNI-GTTVKGAVDD----LDLVIQTLEE 262 (476)
Q Consensus 207 -------~v~~v~~~~~-g-----------~~D~~~Le~~l~~~~~~p~~vv~t~-gtt~tG~id~----l~~I~~ia~~ 262 (476)
.+..+|.... + .-|++.|++.+....+....|++.- .....|.+.| ++++.++|++
T Consensus 175 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~ 254 (453)
T PRK06943 175 AYDPLIRHAHVVASPDARGARPGETAADVAARALADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDR 254 (453)
T ss_pred ccccCCCCCEEECCCCccccccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHH
Confidence 1233332211 0 0135778888875555556666653 2455566533 8999999999
Q ss_pred hCCCCCceEEEEecCcccccccccccC-CCCCCcccccEEEEcCCCCCCCCC-CceeEEeehhhhhhhcCCc---cccCC
Q 011842 263 SGFTQDRFYIHCDGALFGLMMPFVKKA-PKVSFKKPIGSVSVSGHKFVGCPM-PCGVQITRMEHINVLSSNV---EYLAS 337 (476)
Q Consensus 263 ~g~~~~~~~lhvD~a~~g~~~~~~~~~-~~~~~~~~~Dsi~~s~hK~l~~p~-~~G~l~~~~~~~~~l~~~~---~yl~~ 337 (476)
||+ ++++|+++.|+--.+.-.. ..+. -..|.++++ |.++.++ ++|.+++++++.+.+.... .++.
T Consensus 255 ~gi-----llI~DEV~TG~GRtG~~fa~~~~g--v~PDivt~g--Kgl~gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~- 324 (453)
T PRK06943 255 YGV-----HLIADEIAVGCGRTGTFFACEQAG--VWPDFLCLS--KGISGGYLPLSLVLSRDAIFAAFYDDDVTRGFLH- 324 (453)
T ss_pred cCC-----EEEeechhhCCCCCcchhHHHhCC--CCCCeEeee--hhhccCcccceEEEEcHHHHHhhcccCccCCccC-
Confidence 999 9999999876521110000 0011 127999885 9888884 8999999998876653211 1110
Q ss_pred CCCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhc---CCe-EeecCCee-EEEEecC-C-cHH-
Q 011842 338 RDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDA---GIS-AMLNELSS-TVVFERP-Q-DEE- 409 (476)
Q Consensus 338 ~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~---g~~-~~~~~~~~-iv~f~~~-~-~~~- 409 (476)
..|+.+ .++...++++.+..-.-++.+++..++.++|.+.|++. +.. .+...+.. -+-|..+ . ...
T Consensus 325 -~~T~~g-----npl~~aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l~~~~~v~~vrG~Gl~~gvel~~~~~~~~~~ 398 (453)
T PRK06943 325 -SHSYTG-----NPLACRAALATLDLFAEDDVLARNARKSARLRAALAPLAAHPQVRHLRQRGTIFAFDVALDGDAARTF 398 (453)
T ss_pred -CCCCCC-----CHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCEEeEeccccEEEEEEccCCCcchHH
Confidence 112222 23444444444321111345677777888888888764 111 11111211 1222211 1 111
Q ss_pred ---H-----hhceeecccCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 011842 410 ---F-----VRRWQLACQGNIAHVVVMPNVTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 410 ---~-----~~~~~l~~~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~ 450 (476)
+ .+++.+...++.+|++....+|++|||.++++|+++++++
T Consensus 399 ~~~i~~~~~~~Gll~~~~g~~l~~~Ppl~it~~eid~~~~~l~~al~~~ 447 (453)
T PRK06943 399 SRRFFEAALERELLLRPIGTTVYLMPPYVLDDDEIAWLAERTRATLDAT 447 (453)
T ss_pred HHHHHHHHHHCCcEEEecCCEEEEeCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 1 1333343345678888778899999999999999998775
No 338
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.44 E-value=2.1e-11 Score=118.79 Aligned_cols=283 Identities=12% Similarity=0.044 Sum_probs=181.7
Q ss_pred HHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccC
Q 011842 141 EVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGEID 220 (476)
Q Consensus 141 e~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D 220 (476)
+-.+.+.+++++|.+. .++-+-|-.++..++-+... .||+|++++..++.+.++.++..-.+..+.++ |
T Consensus 141 HldlE~~iakF~G~E~----aivYs~gF~ti~S~ipafsK--rGDIi~~de~~nfaIq~GlqlSRS~i~~Fkhn-----d 209 (467)
T KOG1358|consen 141 HLDLEKRIAKFMGTED----AIVYSYGFSTIESAIPAFSK--RGDIIFVDEAVNFAIQKGLQLSRSTISYFKHN-----D 209 (467)
T ss_pred ecccHHHHHHhhCCcc----eeeeccccchhhhcchhhhc--cCcEEEEehhhhHHHHHHHhhhhheeEEecCC-----C
Confidence 3344455889999985 45555555555555555544 89999999999999999999998899999887 8
Q ss_pred HHHHHHHHHcCC-------C--Cc-EEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCccccccc-ccccC
Q 011842 221 CADFKAKLLQNK-------D--KP-AIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMP-FVKKA 289 (476)
Q Consensus 221 ~~~Le~~l~~~~-------~--~p-~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~-~~~~~ 289 (476)
+++||+.+.+.+ + .+ .++++.--.-++|.+-|+.+|.++..||.. .++.|+.++.+.+. .++..
T Consensus 210 m~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~i~pl~~iv~lk~Kyk~-----RvildEs~SfG~lg~~GrGv 284 (467)
T KOG1358|consen 210 MEDLERLLPEQEDEDQKNPKKALTRRFIVVEGLYANTGDICPLPEIVKLKNKYKF-----RVILDESLSFGVLGKTGRGV 284 (467)
T ss_pred HHHHHHhccCcchhhhhccccccceEEEEEEeeccCCCcccccHHHHHHHhhheE-----EEEEecccccccccccCccc
Confidence 999998876543 1 12 245454448889999999999999999999 99999999866543 23332
Q ss_pred CC-CCCc-ccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhC-hhcH
Q 011842 290 PK-VSFK-KPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKG-YKGF 366 (476)
Q Consensus 290 ~~-~~~~-~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g-~~g~ 366 (476)
.. +... ..+|.++.+....++. .|.+++.+..+- ..+-+. ..++.+|+...+ +..-++.+++. .+.-
T Consensus 285 teH~~v~~~~iDiv~~sm~~alas---~GgFc~G~~~i~----~hQrLS--g~~Y~fSAslPp-~la~aa~~ai~i~~~~ 354 (467)
T KOG1358|consen 285 TEHFGVPITDIDIVTASMETALAS---GGGFCAGKSFIA----DHQRLS--GSGYCFSASLPP-YLAGAAIKAILIEEWN 354 (467)
T ss_pred cccCCCCccceeeeeecccccccc---cCceeecceeeE----eeeecc--ccceeeeccCch-hhhhhHHHHHHHHhhC
Confidence 22 2222 3389999998777764 444444443210 011111 123344554332 22223333332 2223
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCeE-eecCCeeEEEEecCC-----cH------HH-----hhceeecc-----------
Q 011842 367 QKEVQKCLRNAHYLKDRLLDAGISA-MLNELSSTVVFERPQ-----DE------EF-----VRRWQLAC----------- 418 (476)
Q Consensus 367 ~~~~~~~~~~a~~l~~~L~~~g~~~-~~~~~~~iv~f~~~~-----~~------~~-----~~~~~l~~----------- 418 (476)
.++++.++.....+-..|+...... ...+.++++...... ++ ++ .+.+.+..
T Consensus 355 p~~~~~L~~k~~~~H~~l~~~s~~~v~~~~~SPi~hl~l~~~~~s~e~e~~lL~eivd~~i~~~~ll~~a~~~~~~e~~~ 434 (467)
T KOG1358|consen 355 PEIVQPLRAKVAKFHAALSSNSGFIVSGSPESPIIHLQLERSYGSREKEEKLLEEIVDKCIAEGVLLTRAKYLEKLERCP 434 (467)
T ss_pred cchhhhhhccccccchhhhcCCceEEecCcCCceeeeeecccccchHHHHHHHHHHHHHHHhhcceehhhhhhhhcccCC
Confidence 4467777777777888887754334 445667777665432 11 11 12222210
Q ss_pred cCCEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Q 011842 419 QGNIAHVVVMPNVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 419 ~~~~lRv~~~~~~T~edid~~~~~l~~~~~~ 449 (476)
-...+|++++..+++|+|+++.+.|++....
T Consensus 435 ~~pSiri~~~a~~seeel~ra~~~ik~~~~~ 465 (467)
T KOG1358|consen 435 IPPSIRICVSAGMSEEELERAAELIKEVASA 465 (467)
T ss_pred CCCcEEEEEeCCCCHHHHHHHHHHHHHHHHh
Confidence 1246899999999999999999999987654
No 339
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.44 E-value=3.1e-10 Score=117.78 Aligned_cols=289 Identities=13% Similarity=0.075 Sum_probs=166.2
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCC-chHHHHHHHHcC--------C---
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRES-HYSVFKAARMYR--------M--- 206 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~-H~S~~~~~~~~G--------~--- 206 (476)
+...++.+.+.+++.-+. ....+|+++||+|+-.|++.+|....+..|+.-+.+ |....-+..+.| .
T Consensus 83 ~~~~~la~~l~~~~p~~~-~~~v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~ 161 (425)
T PRK07495 83 ENYVRLAERLNALVPGDF-AKKTIFVTTGAEAVENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAM 161 (425)
T ss_pred HHHHHHHHHHHHhCCCCC-CCEEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCC
Confidence 455567777877764221 124899999999999999999875444556654444 433222222111 1
Q ss_pred --eEEEEeCCCC-CccC----HHHHHHHHHc--CCCCcEEEEEeeCCCcccccc----CHHHHHHHHHHhCCCCCceEEE
Q 011842 207 --ECVKVDCLIS-GEID----CADFKAKLLQ--NKDKPAIINVNIGTTVKGAVD----DLDLVIQTLEESGFTQDRFYIH 273 (476)
Q Consensus 207 --~v~~v~~~~~-g~~D----~~~Le~~l~~--~~~~p~~vv~t~gtt~tG~id----~l~~I~~ia~~~g~~~~~~~lh 273 (476)
.+..+|.+.+ ..++ ++.+++.+.. ....+..|++.-.....|.+. -+++|.++|++||+ +++
T Consensus 162 ~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~-----llI 236 (425)
T PRK07495 162 MPDVYHVPFPVELHGVSVEQSLAALDKLFKADVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGI-----LLI 236 (425)
T ss_pred CCCeEEecCCcccccccHHHHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCC-----EEE
Confidence 2344544321 1122 4556777753 223455666654454566443 28999999999999 999
Q ss_pred EecCcccccccccccCCCCCCc-ccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHH
Q 011842 274 CDGALFGLMMPFVKKAPKVSFK-KPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPI 352 (476)
Q Consensus 274 vD~a~~g~~~~~~~~~~~~~~~-~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l 352 (476)
+|++|.|+... .... ..... -..|.+++ .|.++.++++|+++++.++.+.+... .+ ..++.+. ++
T Consensus 237 ~DEv~tG~gr~-G~~~-a~~~~gv~pDi~tl--sK~l~~G~pigav~~~~~i~~~~~~~-~~----~~T~~~~-----pl 302 (425)
T PRK07495 237 ADEVQTGFART-GKLF-AMEHHEVAADLTTM--AKGLAGGFPLAAVTGRAEIMDAPGPG-GL----GGTYGGN-----PL 302 (425)
T ss_pred EechhhcCCcC-CCce-eecccCCCCCEEee--hhhhcCCccceEEEEcHHHHhccCCC-Cc----CCCCCCC-----HH
Confidence 99999764222 1110 01111 12576655 59888889999999998877655321 11 1122222 34
Q ss_pred HHH---HHHHHhChhcHHHHHHHHHHHHHHHHHHHHhc----CCe-EeecCCeeEEEEec--CC----cHH----H----
Q 011842 353 FLW---YTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDA----GIS-AMLNELSSTVVFER--PQ----DEE----F---- 410 (476)
Q Consensus 353 ~~~---~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----g~~-~~~~~~~~iv~f~~--~~----~~~----~---- 410 (476)
.+. ++++.+.. .+..++..++.++|+++|++. +.. .+...+ .+..+.. +. +.. +
T Consensus 303 ~~aaa~a~l~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~G-l~~~iel~~~~~~~~~~~~~~~~~~~~ 378 (425)
T PRK07495 303 GIAAAHAVLDVIEE---EDLCERANQLGNRLKQRLASLRETVPEIADIRGPG-FMNAVEFNDADSGLPSAEFANRVRLKA 378 (425)
T ss_pred HHHHHHHHHHHHHh---chHHHHHHHHHHHHHHHHHHHHhhCCCeeeeecCc-eEEEEEEecCCCCCccHHHHHHHHHHH
Confidence 444 44444422 245566667777777777653 221 122222 2222221 11 111 1
Q ss_pred -hhceeecc-c--CCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 011842 411 -VRRWQLAC-Q--GNIAHVVVMPNVTIDKLDDFLNELIENRSTWY 451 (476)
Q Consensus 411 -~~~~~l~~-~--~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~ 451 (476)
.+++.+.. . ++.+|+.....+|+++||.+++.|+++.+++.
T Consensus 379 ~~~Gvl~~~~g~~~~~~r~~Ppl~it~~~id~~~~~l~~~l~~~~ 423 (425)
T PRK07495 379 LEKGLILLTCGVHGNVIRFLAPITIQDDVFAEALDILEASILEAS 423 (425)
T ss_pred HHCCeEEeecCCCCCEEEEeCCCccCHHHHHHHHHHHHHHHHHHh
Confidence 12333322 2 47899988888999999999999999987653
No 340
>PRK06105 aminotransferase; Provisional
Probab=99.44 E-value=2.4e-10 Score=119.72 Aligned_cols=296 Identities=11% Similarity=0.054 Sum_probs=167.9
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhC-----C-CcEEEe-cCCCchHHHHHHHHcCC-----
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVF-----P-DGILYA-SRESHYSVFKAARMYRM----- 206 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~-----p-~~~Vl~-s~~~H~S~~~~~~~~G~----- 206 (476)
+.+.++.+.+.+++..+. ...+|+++||+||-.|++.++... + +..|+. ...-|.....+..+.+.
T Consensus 92 ~~~~~lae~L~~~~p~~~--~~v~f~~SGseAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~ 169 (460)
T PRK06105 92 GPVIDLAEKLVAMAPVPM--SKVFFTNSGSEANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHR 169 (460)
T ss_pred HHHHHHHHHHHHhCCCCC--CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCccccc
Confidence 556677788888774322 248999999999999999987531 1 334554 44445443333222221
Q ss_pred -------eEEEEeCCCCCc-------------cCHHHHHHHHHcC-CCCcEEEEEeeCCCccccccC----HHHHHHHHH
Q 011842 207 -------ECVKVDCLISGE-------------IDCADFKAKLLQN-KDKPAIINVNIGTTVKGAVDD----LDLVIQTLE 261 (476)
Q Consensus 207 -------~v~~v~~~~~g~-------------~D~~~Le~~l~~~-~~~p~~vv~t~gtt~tG~id~----l~~I~~ia~ 261 (476)
.+..+|.....+ ...++|++.+... .+.+..|++.-..+.-|.+.| +++|.++|+
T Consensus 170 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~ 249 (460)
T PRK06105 170 SFDLPLDRILHTGCPHYYRFGLPGESEEAFATRLANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLR 249 (460)
T ss_pred ccCCCCCCCEEcCCCcccccccCCCChHHHHHHHHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHH
Confidence 122232211000 1246788888533 345566777655666677776 999999999
Q ss_pred HhCCCCCceEEEEecCcccccccccc-cCCCCCCcccccEEEEcCCCCCCCC-CCceeEEeehhhhhhhcCCccccC--C
Q 011842 262 ESGFTQDRFYIHCDGALFGLMMPFVK-KAPKVSFKKPIGSVSVSGHKFVGCP-MPCGVQITRMEHINVLSSNVEYLA--S 337 (476)
Q Consensus 262 ~~g~~~~~~~lhvD~a~~g~~~~~~~-~~~~~~~~~~~Dsi~~s~hK~l~~p-~~~G~l~~~~~~~~~l~~~~~yl~--~ 337 (476)
+||+ ++++|+++.|+-....- ....+.. ..|.++++ |.++.+ .++|+++.++++.+.+........ .
T Consensus 250 ~~~~-----llI~DEv~tG~GRtG~~f~~~~~~v--~PDi~~~g--K~lggG~~P~~av~~~~~i~~~~~~~~~~~~~~~ 320 (460)
T PRK06105 250 KYDI-----LLVADEVICGFGRTGNMFGCETFGI--KPDILVMS--KQLSSSYQPLSAVLMNEKVYDPIADESGKIGTFG 320 (460)
T ss_pred HcCC-----eEEEeccccCCCcCchhhhHHhcCC--CCCeeeee--cccccCcccceEEEEcHHHHHHHhcccccCcccc
Confidence 9999 99999999554211100 0001111 26877765 988876 479999999887665532211100 0
Q ss_pred CCCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhc---CCeE-eecCCeeEEE--EecCC-----
Q 011842 338 RDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDA---GISA-MLNELSSTVV--FERPQ----- 406 (476)
Q Consensus 338 ~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~---g~~~-~~~~~~~iv~--f~~~~----- 406 (476)
...|+.+ .++...++++.+..-.-++.+++..++.++|++.|++. +... +...+ .+.. |..+.
T Consensus 321 h~~T~~g-----npl~~aaa~a~L~~i~~~~l~~~v~~~g~~l~~~L~~l~~~~~v~~vrG~G-l~~gie~~~~~~~~~~ 394 (460)
T PRK06105 321 HGFTASG-----HPVAAAVALENLAIIEERDLVGNAAERGARLQARLRALADHPLVGEVRGVG-LIAAVELVADKATKTP 394 (460)
T ss_pred cCCCCCC-----CHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecc-eEEEEEEecCcccCCC
Confidence 0112222 23443333333321111356777888888888888775 2111 11111 1222 21110
Q ss_pred --c-H----HH-----hhceeecccCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 011842 407 --D-E----EF-----VRRWQLACQGNIAHVVVMPNVTIDKLDDFLNELIENRSTWY 451 (476)
Q Consensus 407 --~-~----~~-----~~~~~l~~~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~ 451 (476)
. . .+ .+++.+...++.+|++....+|++|||.+++.|.++.+++.
T Consensus 395 ~~~~~~~a~~i~~~~~~~Gvl~~~~g~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~ 451 (460)
T PRK06105 395 FEPPGKVGARANAAAHEHGVISRAMGDTLAFCPPLIITAAQVDEMVDRFGRALDDVA 451 (460)
T ss_pred CCchhHHHHHHHHHHHHCCeEEEecCCEEEEECCCccCHHHHHHHHHHHHHHHHHHH
Confidence 0 1 11 12233333357888887777899999999999999887654
No 341
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.43 E-value=4.8e-10 Score=117.42 Aligned_cols=292 Identities=16% Similarity=0.116 Sum_probs=162.7
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHH-HHHHHHcCC-----------
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSV-FKAARMYRM----------- 206 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~-~~~~~~~G~----------- 206 (476)
+.+.++.+.+.+++.-... ...+|+++||+|+..|+..+|....+..|+.-+.+|..+ .-+..+.+-
T Consensus 97 ~~~~~la~~L~~~~p~~~~-~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~ 175 (451)
T PRK06918 97 EPYIELAEKLAALAPGSFD-KKVLFLNSGAEAVENAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPF 175 (451)
T ss_pred HHHHHHHHHHHHhCCCCCC-CEEEEcCCcHHHHHHHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCccccccCCCC
Confidence 5567788888888753211 248999999999999999999764445555545444333 222222221
Q ss_pred --eEEEEeCCC-----CCc-------cCHHHHHHHHHc--CCCCcEEEEEeeCCCccccccC----HHHHHHHHHHhCCC
Q 011842 207 --ECVKVDCLI-----SGE-------IDCADFKAKLLQ--NKDKPAIINVNIGTTVKGAVDD----LDLVIQTLEESGFT 266 (476)
Q Consensus 207 --~v~~v~~~~-----~g~-------~D~~~Le~~l~~--~~~~p~~vv~t~gtt~tG~id~----l~~I~~ia~~~g~~ 266 (476)
.+..+|... .+. ..++.+++.+.. ..+....|++.-....-|.+.| +++|.++|++||+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gi- 254 (451)
T PRK06918 176 APEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGI- 254 (451)
T ss_pred CCCcEEcCCCccccccccCchHHHHHHHHHHHHHHHHhhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCC-
Confidence 123333210 111 002344544431 2233455555433433454432 8999999999999
Q ss_pred CCceEEEEecCcccccccccccCCCCCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCC
Q 011842 267 QDRFYIHCDGALFGLMMPFVKKAPKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSR 346 (476)
Q Consensus 267 ~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr 346 (476)
|+++|++|.++.... ...+...+....|+++ +.|.++.++++|+++.++++.+.+..... ..++.++
T Consensus 255 ----llI~DEV~tg~gr~g-~~~a~~~~~v~pDi~t--~sK~l~~G~pig~v~~~~~i~~~~~~~~~-----~~T~~g~- 321 (451)
T PRK06918 255 ----LFVADEIQTGFARTG-KYFAIEHFDVVPDLIT--VSKSLGAGVPISGVIGRKEIMDESAPGEL-----GGTYAGS- 321 (451)
T ss_pred ----EEEEeccccCcCccC-ceehhHhcCCCCCEEe--eehhhcCCCccEEEEEcHHHHhccCCCCc-----CcCCCcC-
Confidence 999999998764322 1111001111257554 56999889999999999887765532110 1122222
Q ss_pred CChhHHHHHH---HHHHhChhcHHHHHHHHHHHHHHHHHHHHhc----CCe-EeecCCeeEEEEec--C-----CcHH--
Q 011842 347 NGHAPIFLWY---TLNRKGYKGFQKEVQKCLRNAHYLKDRLLDA----GIS-AMLNELSSTVVFER--P-----QDEE-- 409 (476)
Q Consensus 347 ~~~~~l~~~~---~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----g~~-~~~~~~~~iv~f~~--~-----~~~~-- 409 (476)
++.+.+ +++.+.... ..++..++.+++.++|++. +.. .+.+.+. ++.+.. + ++..
T Consensus 322 ----~l~~aaa~a~l~~i~~~~---~~~~~~~~g~~l~~~l~~l~~~~~~~~~vrg~G~-~~~~~~~~~~~~~~~~~~~~ 393 (451)
T PRK06918 322 ----PLGCAAALAVLDIIEKEN---LNDRAIELGKVVMNRFEEMKNKYNCIGDVRGLGA-MCAFELVQDRKTKEPDKTLT 393 (451)
T ss_pred ----HHHHHHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHHHHHhhCCCceeecccee-EEEEEEccCCCcCCCcHHHH
Confidence 344444 344332233 3444455556666666553 321 1223332 333221 1 1111
Q ss_pred --Hh-----hceeeccc---CCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhc
Q 011842 410 --FV-----RRWQLACQ---GNIAHVVVMPNVTIDKLDDFLNELIENRSTWYED 453 (476)
Q Consensus 410 --~~-----~~~~l~~~---~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~~~ 453 (476)
+. ++..+... ++.+|+++...+|+++||.++++|.++.+.++..
T Consensus 394 ~~l~~~~~~~Gvlv~~~~~~~~~lrl~p~l~~t~~~id~~l~~l~~~l~~~~~~ 447 (451)
T PRK06918 394 ANICKEANKRGLLLLSAGTYGNVIRVLMPLVITDEQLEEGLTIIEESLQACYEK 447 (451)
T ss_pred HHHHHHHHHCCeEEeecCCCCCEEEEECCCccCHHHHHHHHHHHHHHHHHHHHh
Confidence 11 23333222 3789988877789999999999999999887643
No 342
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.42 E-value=3.7e-10 Score=118.06 Aligned_cols=290 Identities=15% Similarity=0.056 Sum_probs=168.3
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchH-HHHHHHHcCC-----------
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYS-VFKAARMYRM----------- 206 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S-~~~~~~~~G~----------- 206 (476)
+...++.+.+.++.+... ...+|+++||+||-.|+..+|....+..|+.-+.+|.. ...+..+.+.
T Consensus 96 ~~~~~lae~L~~~~p~~~--~~v~f~~SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~ 173 (457)
T PRK05639 96 ERAIRVAEKLAEISPIEN--PKVLFGLSGSDAVDMAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPL 173 (457)
T ss_pred HHHHHHHHHHHhhCCCCc--CEEEEeCchHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCC
Confidence 455567778888765332 24899999999999999999976455566665554433 2222222221
Q ss_pred --eEEEEeCCCCCc--------cCH--------HHHHHHHHc---CCCCcEEEEEeeCCCccccccC----HHHHHHHHH
Q 011842 207 --ECVKVDCLISGE--------IDC--------ADFKAKLLQ---NKDKPAIINVNIGTTVKGAVDD----LDLVIQTLE 261 (476)
Q Consensus 207 --~v~~v~~~~~g~--------~D~--------~~Le~~l~~---~~~~p~~vv~t~gtt~tG~id~----l~~I~~ia~ 261 (476)
++..+|.....+ -|+ +.|++.|.. .++....|++.-.....|.+.| +++|.++|+
T Consensus 174 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~ 253 (457)
T PRK05639 174 MPNVVWIPYPNPYRNPWGINGYEEPDELINRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLD 253 (457)
T ss_pred CCCceEeCCCccccccccccccCCHHHHHHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHH
Confidence 234454431110 122 345555532 2344556666544555566544 899999999
Q ss_pred HhCCCCCceEEEEecCccccccccccc-C-CCCCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCC
Q 011842 262 ESGFTQDRFYIHCDGALFGLMMPFVKK-A-PKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRD 339 (476)
Q Consensus 262 ~~g~~~~~~~lhvD~a~~g~~~~~~~~-~-~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~ 339 (476)
+||+ ++++|+++.|+-- .... . ..+.. ..|.+++ .|.++.++++|+++.++++.+... ..++
T Consensus 254 ~~g~-----llI~DEv~tG~Gr-tG~~~a~~~~gv--~PDiv~~--gK~l~gG~pi~av~~~~~i~~~~~--~~~~---- 317 (457)
T PRK05639 254 EHGI-----LLVMDEVQTGIGR-TGKWFASEWFEV--KPDLIIF--GKGVASGMGLSGVIGRKELMDLTS--GSAL---- 317 (457)
T ss_pred HcCC-----EEEEechhhccCc-CchHHHHHhcCC--CCCEEEe--chhhcCCCcceeEEehHHHHhhcC--CCcc----
Confidence 9999 9999999976421 1111 0 01111 3788885 599987888999999988765211 1121
Q ss_pred CcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhc----CCeE-eecCCe-eEEEEecCC---cHH-
Q 011842 340 ATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDA----GISA-MLNELS-STVVFERPQ---DEE- 409 (476)
Q Consensus 340 ~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----g~~~-~~~~~~-~iv~f~~~~---~~~- 409 (476)
.|+.+ .++...++++.+..-.-++.+++..++.++|++.|++. +... +...+. .-+-|..+. +..
T Consensus 318 ~T~~g-----~p~~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~VrG~Gl~~gve~~~~~~~~~~~~ 392 (457)
T PRK05639 318 LTPAA-----NPVISAAAEATLEIIEEENLLKNALKVGEFIKKRLLEMKESFEVIGDVRGKGLMIGVEIVKENGKPDPEL 392 (457)
T ss_pred cCCCc-----CHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHhCCCEEeeccceeEEEEEEecCCCCCCHHH
Confidence 12221 23333334333322122345677777888888888773 3211 111221 111222211 111
Q ss_pred ---H-----hhceeeccc---CCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 011842 410 ---F-----VRRWQLACQ---GNIAHVVVMPNVTIDKLDDFLNELIENRSTWY 451 (476)
Q Consensus 410 ---~-----~~~~~l~~~---~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~ 451 (476)
+ .+++.+... ++.+|+.....+|++|||.++++|+++.+...
T Consensus 393 ~~~~~~~~~~~Gv~~~~~g~~~~~lr~~Ppl~it~~~id~~~~~l~~~l~~~~ 445 (457)
T PRK05639 393 TGKICWRAFELGLILPSYGMFGNVIRITPPLVITKEIAEKGLEIMERAIKDAL 445 (457)
T ss_pred HHHHHHHHHhCCeEEeecCCCCCEEEEeCCCccCHHHHHHHHHHHHHHHHHHH
Confidence 1 233444322 47899999999999999999999999987764
No 343
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.41 E-value=4.2e-10 Score=117.78 Aligned_cols=292 Identities=12% Similarity=0.024 Sum_probs=166.5
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEE-ecCCCchHHHHHHHHcCC-----------
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILY-ASRESHYSVFKAARMYRM----------- 206 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl-~s~~~H~S~~~~~~~~G~----------- 206 (476)
+.+.++.+.++++++... ...+|+++|++|+-.|+..+|....+..|+ ....-|.....+..+.|.
T Consensus 113 ~~~~~lae~L~~~~p~~~--~~v~f~~sGseAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~ 190 (459)
T PRK06082 113 ETAIECAEKLTEIAGGEL--NRVLFAPGGTSAIGMALKLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLM 190 (459)
T ss_pred HHHHHHHHHHHHhCCCCC--CEEEECCCcHHHHHHHHHHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCC
Confidence 666778888888875322 248999999999999999998753334444 444445444334333332
Q ss_pred -eEEEEeCCCC-----Ccc------CHHHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceE
Q 011842 207 -ECVKVDCLIS-----GEI------DCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFY 271 (476)
Q Consensus 207 -~v~~v~~~~~-----g~~------D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~ 271 (476)
.+..+|.... ... +++.|++.+.+.. ....|++.-..+..+.+.| +++|.++|++||+ +
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~-~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~-----l 264 (459)
T PRK06082 191 AGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIEKEG-GIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNV-----L 264 (459)
T ss_pred CCCEEeCCCcccccccCChhHHHHHHHHHHHHHHhcCC-CEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCC-----E
Confidence 1233332110 011 2366888886432 3455655433444233444 8999999999999 9
Q ss_pred EEEecCccccccccccc-C-CCCCCcccccEEEEcCCCCCCCCC-CceeEEeehhhhhhhcCCccccCCCCCcccCCCCC
Q 011842 272 IHCDGALFGLMMPFVKK-A-PKVSFKKPIGSVSVSGHKFVGCPM-PCGVQITRMEHINVLSSNVEYLASRDATIMGSRNG 348 (476)
Q Consensus 272 lhvD~a~~g~~~~~~~~-~-~~~~~~~~~Dsi~~s~hK~l~~p~-~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~ 348 (476)
+++|+++.|+--.+ .. . ..+.. ..|.+++ .|.++.++ ++|.++.+++....+.. .+. ..|+.+.
T Consensus 265 lI~DEV~tG~GRtG-~~fa~e~~gv--~PDiv~~--gKgl~gG~~P~~av~~~~~i~~~~~~--~~~---~~T~~gn--- 331 (459)
T PRK06082 265 LIIDEIPNGMGRTG-EWFTHQAYGI--EPDILCI--GKGLGGGLVPIAAMITKDKYNTAAQI--SLG---HYTHEKS--- 331 (459)
T ss_pred EEEechhhCCCccc-hhhHhHhhCC--CCCEEEe--cccccCCCCcceEEEEcHHHHhhccC--CCC---CCCCCcC---
Confidence 99999997642111 11 0 00111 2788874 59998874 89999998876432211 110 0122222
Q ss_pred hhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhc----CCeE-eecCCe-eEEEEecCC-----cHH----H---
Q 011842 349 HAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDA----GISA-MLNELS-STVVFERPQ-----DEE----F--- 410 (476)
Q Consensus 349 ~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----g~~~-~~~~~~-~iv~f~~~~-----~~~----~--- 410 (476)
++...++++.+..-.-++.+++..++.++|++.|++. ++.. +...+. .-+-|..+. +.. +
T Consensus 332 --pl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~ 409 (459)
T PRK06082 332 --PLGCAAALATIEVIEQEGLLEKVKADSQFMRERLLEMKAKYPLIGDVRGIGLLWGVELVTDRHTKERAYDEAEAVLYR 409 (459)
T ss_pred --HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhCCCeeeeeeccceeEEEEccCccccCccHHHHHHHHHH
Confidence 3333333333311111246677788888888888763 3211 112221 112222111 111 1
Q ss_pred --hhceee-cccCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhc
Q 011842 411 --VRRWQL-ACQGNIAHVVVMPNVTIDKLDDFLNELIENRSTWYED 453 (476)
Q Consensus 411 --~~~~~l-~~~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~~~ 453 (476)
.+++.+ +..++.+|++....+|++|||.++++++++.+++.+|
T Consensus 410 ~~~~Gvl~~~~~~~~i~~~Ppl~it~~eid~~~~~l~~~l~~~~~~ 455 (459)
T PRK06082 410 CLNNGLSFKVSQGNVIQLSPPLIITREELTQALAILEEAIAKICQD 455 (459)
T ss_pred HHhCCCEEEecCCCEEEEeCCCccCHHHHHHHHHHHHHHHHHHhhh
Confidence 122223 2346788887777889999999999999999887544
No 344
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.41 E-value=4.8e-11 Score=119.07 Aligned_cols=212 Identities=16% Similarity=0.048 Sum_probs=154.7
Q ss_pred HHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchH----HHHHHHHcCCeEEEEeCCCC
Q 011842 141 EVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYS----VFKAARMYRMECVKVDCLIS 216 (476)
Q Consensus 141 e~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S----~~~~~~~~G~~v~~v~~~~~ 216 (476)
+..+.+.++.+-|... .+.+++|..|...+++..+. +++.|++...-|.- +.+....+|++...+.++
T Consensus 79 ~~~le~~iaal~ga~~----~l~fsSGmaA~~~al~~L~~--~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~~-- 150 (409)
T KOG0053|consen 79 RDVLESGIAALEGAAH----ALLFSSGMAAITVALLHLLP--AGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDVD-- 150 (409)
T ss_pred hHHHHHHHHHHhCCce----EEEecccHHHHHHHHHHhcC--CCCcEEEeCCCcccHHHHHHHHHHHhCceeeeechh--
Confidence 3344556788888764 78889999899999888775 77888877665533 345556779999888877
Q ss_pred CccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCcc
Q 011842 217 GEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKK 296 (476)
Q Consensus 217 g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~ 296 (476)
|++.++++++++++ +|.+.+|+||+..+.||++|+++|+++|+ .++||..+++.+.- +...
T Consensus 151 ---~~~~~~~~i~~~t~---~V~~ESPsNPll~v~DI~~l~~la~~~g~-----~vvVDnTf~~p~~~--------~pL~ 211 (409)
T KOG0053|consen 151 ---DLKKILKAIKENTK---AVFLESPSNPLLKVPDIEKLARLAHKYGF-----LVVVDNTFGSPYNQ--------DPLP 211 (409)
T ss_pred ---hHHHHHHhhccCce---EEEEECCCCCccccccHHHHHHHHhhCCC-----EEEEeCCcCccccc--------Chhh
Confidence 88899999988776 89999999999999999999999999999 99999998876331 2222
Q ss_pred -cccEEEEcCCCCCCCCC--CceeEEee-hhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHHH
Q 011842 297 -PIGSVSVSGHKFVGCPM--PCGVQITR-MEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQK 372 (476)
Q Consensus 297 -~~Dsi~~s~hK~l~~p~--~~G~l~~~-~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~ 372 (476)
+||+++-|..||+++-- -.|.++.+ .++.+.+.....++... ..++.+|..++ |.+.+.-++++
T Consensus 212 lGADIV~hSaTKyi~Ghsdvi~G~iv~n~~~~~~~l~~~~~~lg~~----------~~p~~~~ll~R--glktl~lRi~~ 279 (409)
T KOG0053|consen 212 LGADIVVHSATKYIGGHSDVIGGSVVLNSEELASRLKFLQEDLGWC----------EDPFDLFLLSR--GLKTLHLRINK 279 (409)
T ss_pred cCCCEEEEeeeeeecCCcceeeeEEecCcHHHHHHHHHHHHHhcCC----------CCHHHHHHHhc--CcchhhhhHHH
Confidence 39999999999998532 25666665 44554443333333221 23455665544 34555667888
Q ss_pred HHHHHHHHHHHHHhcCCeE
Q 011842 373 CLRNAHYLKDRLLDAGISA 391 (476)
Q Consensus 373 ~~~~a~~l~~~L~~~g~~~ 391 (476)
..+++..+.+.|++.+...
T Consensus 280 ~~ena~~~A~~Le~~~~v~ 298 (409)
T KOG0053|consen 280 HSENALKIALLLEAHPKVK 298 (409)
T ss_pred HHHHHHHHHHHhhhCCcee
Confidence 8888888888888876543
No 345
>PRK05965 hypothetical protein; Provisional
Probab=99.41 E-value=7e-10 Score=116.23 Aligned_cols=299 Identities=12% Similarity=0.006 Sum_probs=169.7
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhC-----C-CcEEEecCCC-chHHHHHHHHcCC-----
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVF-----P-DGILYASRES-HYSVFKAARMYRM----- 206 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~-----p-~~~Vl~s~~~-H~S~~~~~~~~G~----- 206 (476)
+...++.+.+.+++.-+. ...+|+++||+|+-.|++.+|... + +..|+.-+.+ |....-+..+.+.
T Consensus 90 ~~~~~lae~L~~~~p~~~--~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~ 167 (459)
T PRK05965 90 EPAIRLAAKLAERAPGSL--NHVYFTLGGSDAVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHR 167 (459)
T ss_pred HHHHHHHHHHHhhCCCCc--CEEEEeCChhHHHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhc
Confidence 555567777877763221 248999999999999999998741 1 3445544444 4332222222221
Q ss_pred -------eEEEEeCCCCC----ccC--------HHHHHHHHHcCC-CCcEEEEEeeCCCccccccC----HHHHHHHHHH
Q 011842 207 -------ECVKVDCLISG----EID--------CADFKAKLLQNK-DKPAIINVNIGTTVKGAVDD----LDLVIQTLEE 262 (476)
Q Consensus 207 -------~v~~v~~~~~g----~~D--------~~~Le~~l~~~~-~~p~~vv~t~gtt~tG~id~----l~~I~~ia~~ 262 (476)
.+..+|..... .-| ++.|++.|.... +....|++.-....-|.+.| +++|.++|++
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~ 247 (459)
T PRK05965 168 GFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAASVAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRE 247 (459)
T ss_pred ccCCCCCCCEEcCCCcccccccCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHH
Confidence 12333322100 012 367888887543 44556666544545565543 8999999999
Q ss_pred hCCCCCceEEEEecCcccccccccccCC-CCCCcccccEEEEcCCCCCCCCC-CceeEEeehhhhhhhcCCcccc--CCC
Q 011842 263 SGFTQDRFYIHCDGALFGLMMPFVKKAP-KVSFKKPIGSVSVSGHKFVGCPM-PCGVQITRMEHINVLSSNVEYL--ASR 338 (476)
Q Consensus 263 ~g~~~~~~~lhvD~a~~g~~~~~~~~~~-~~~~~~~~Dsi~~s~hK~l~~p~-~~G~l~~~~~~~~~l~~~~~yl--~~~ 338 (476)
||+ ++++|+++.|+--.+.-... .+. -..|.++++ |.++.++ ++|.+++++++.+.+....... ...
T Consensus 248 ~gi-----llI~DEV~tGfGRtG~~~a~~~~g--v~PDiv~~g--Kgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h 318 (459)
T PRK05965 248 LGI-----LFVADEVITGFGRTGPLFACEAEG--VVPDLMTVA--KGLTSGYVPMGAVLMSDHVYQGIADGAGAAAPVGH 318 (459)
T ss_pred cCC-----EEEEechhccCccCchhhhHhhcC--CCCCeEEec--hhhccCCcceeEEEEcHHHHHHHhccccccccccc
Confidence 999 99999998765211100000 011 127998876 9998885 8999999999876653221100 001
Q ss_pred CCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhc---CCeE-eecCCe-eEEEEecCC------c
Q 011842 339 DATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDA---GISA-MLNELS-STVVFERPQ------D 407 (476)
Q Consensus 339 ~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~---g~~~-~~~~~~-~iv~f~~~~------~ 407 (476)
..|+.+. +++..++++.+..-.-++..++..++.++|.+.|++. +... +...+. ..+-|.... +
T Consensus 319 ~~T~~gn-----pl~~Aaa~a~L~~l~~~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~ 393 (459)
T PRK05965 319 GYTYSAH-----PVSAAVGLEVLRLYHEGGLLANGQKAGPRFAAGLDALRAHPLVGDVRGRGLLGALELVADKATKTPFD 393 (459)
T ss_pred cCCCCCC-----HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhccCCCEEEEeecceEEEEEEeccccccCCCC
Confidence 1122222 3444444443321112345677778888888888774 2111 111111 112122110 0
Q ss_pred --HH----H-----hhceeec-ccCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhc
Q 011842 408 --EE----F-----VRRWQLA-CQGNIAHVVVMPNVTIDKLDDFLNELIENRSTWYED 453 (476)
Q Consensus 408 --~~----~-----~~~~~l~-~~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~~~ 453 (476)
.. + .+++.+. ...+.+|+.....+|++|||.+++.|.++.+++..|
T Consensus 394 ~~~~~~~~i~~~~~~~Gll~~~~g~~~i~~~PpL~it~~ei~~~~~~l~~~l~~~~~~ 451 (459)
T PRK05965 394 AALDPADRIFDRAYANGLVFRAFGDGVLGFAPALCCTEGEFDLIFERTRKTLDDVLAD 451 (459)
T ss_pred chhHHHHHHHHHHHhCCeEEEecCCcEEEEECCCcCCHHHHHHHHHHHHHHHHHHhcC
Confidence 01 1 1233333 234678888888899999999999999999887544
No 346
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.41 E-value=2.4e-10 Score=118.86 Aligned_cols=286 Identities=12% Similarity=0.067 Sum_probs=159.1
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEec-CCCchHHHHH---HH--HcCC------
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYAS-RESHYSVFKA---AR--MYRM------ 206 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s-~~~H~S~~~~---~~--~~G~------ 206 (476)
..+.++.+.+.+++... ...+|+++||+|+..|+..+|....+..|+.. ...+.++... .. ..|.
T Consensus 88 ~~~~~la~~l~~~~p~~---~~v~f~~sGseA~e~AlklAr~~tgr~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~ 164 (431)
T PRK06209 88 AIELDAAESFLELIDGA---DMVKFCKNGSDATSAAVRLARAYTGRDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSA 164 (431)
T ss_pred HHHHHHHHHHHHhCCcc---ceEEEecCHHHHHHHHHHHHHHHhCCCeEEEeccCccccccccccccCCCCCCCChhHhc
Confidence 55556777888876321 24899999999999999999876444455443 1222111100 00 0011
Q ss_pred eEEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCccccccccc
Q 011842 207 ECVKVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFV 286 (476)
Q Consensus 207 ~v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~ 286 (476)
.+..++.+ |+++|+++|++..+....|++....++.+..+.+++|.++|++||+ ++++|+++.|+.. ..
T Consensus 165 ~~~~~~~~-----d~~~l~~~l~~~~~~~aavi~Epv~g~~~~~~~l~~l~~lc~~~g~-----lLI~DEv~tG~~~-~~ 233 (431)
T PRK06209 165 LTVTFRYN-----DIASLEALFEDHPGRIACVILEPATADEPQDGFLHEVRRLCHENGA-----LFILDEMITGFRW-HM 233 (431)
T ss_pred cccccCCC-----CHHHHHHHHHhCCCCEEEEEEccccCCCCCHHHHHHHHHHHHHcCC-----EEEEEcccccCCc-Cc
Confidence 02223322 8999999997654445566665445555555569999999999999 9999999866422 11
Q ss_pred ccCCC-CCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcC-----CccccCCCCCcccCCCCC--hhHHHHHHHH
Q 011842 287 KKAPK-VSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSS-----NVEYLASRDATIMGSRNG--HAPIFLWYTL 358 (476)
Q Consensus 287 ~~~~~-~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~-----~~~yl~~~~~~~~~sr~~--~~~l~~~~~l 358 (476)
..... +.. ..|.+++ .|.++.++++|+++.++++.+.+.. ...|+. ..+-.+ ....+..+++
T Consensus 234 ~g~~~~~gv--~PDi~t~--gK~lggG~p~~av~~~~~i~~~~~~~~~~~~~~~~~------~~T~~~np~~~aaa~a~l 303 (431)
T PRK06209 234 RGAQKLYGI--VPDLSCF--GKALGNGFAVSALAGKREYMELGGLEHTDRERVFLL------STTHGAETHALAAAIATM 303 (431)
T ss_pred chhhHHhCC--Ccceeee--hhhhcCCcccEEEEEHHHHHhhhcccccCCCCceee------ccCCCCCHHHHHHHHHHH
Confidence 11111 111 2677655 5999888889999999887654211 011111 112111 2223333455
Q ss_pred HHhChhcHHHHHHHHHHHHHHHHHHHHh----cCCeEee-cCC--eeEEEEe-cC---CcHHHhhcee--ecccCCEE-E
Q 011842 359 NRKGYKGFQKEVQKCLRNAHYLKDRLLD----AGISAML-NEL--SSTVVFE-RP---QDEEFVRRWQ--LACQGNIA-H 424 (476)
Q Consensus 359 ~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~g~~~~~-~~~--~~iv~f~-~~---~~~~~~~~~~--l~~~~~~l-R 424 (476)
+.+..++ .+++..++.++|++.|++ .++.... ..+ ..++.+. .+ ....+...+. +-..+-.+ -
T Consensus 304 ~~i~~~~---~~~~~~~~g~~l~~~L~~~~~~~~~~~~vr~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~p~ 380 (431)
T PRK06209 304 AIYRDED---VIERLHEQGAKLAAGVNEAAAEHGLQDHVRVSGRPCCLTYSTLDGNGQPSQAFRTLFLQETIRRGVLMPS 380 (431)
T ss_pred HHHhccC---HHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeecceEEEEEecCCcccCCcHHHHHHHHHHHHHCCccccc
Confidence 5553333 456666677777777655 4443211 112 2232221 11 1111111110 00111111 1
Q ss_pred EEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 011842 425 VVVMPNVTIDKLDDFLNELIENRSTWY 451 (476)
Q Consensus 425 v~~~~~~T~edid~~~~~l~~~~~~~~ 451 (476)
++++..+|++|||+++++|.++.+.+.
T Consensus 381 l~is~~ht~~dId~~l~~l~~~l~~~~ 407 (431)
T PRK06209 381 LVVSYAHGDADIERTIDAVHGALGVYR 407 (431)
T ss_pred ccccccCCHHHHHHHHHHHHHHHHHHH
Confidence 456678899999999999999988773
No 347
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=99.40 E-value=5.5e-10 Score=110.72 Aligned_cols=341 Identities=14% Similarity=0.122 Sum_probs=206.7
Q ss_pred CcHHHHHHHHHHHHhcccc--cccCCCCcCCcchHHHHHHHHHhhCCCCCCcccCccchhhH----HHHHHHHHHHHHHc
Q 011842 79 AYMAGVLARYRKTLMERTK--HHLGYPYNLDFDYGALAQLQHFSINNLGDPFIESNYGVHSR----QFEVGVLDWFARLW 152 (476)
Q Consensus 79 ~~~~~il~~~~~~~~~~~~--~~~g~p~~~~~~~~~l~~~l~~~~n~~g~~~~~~~~~~~~~----~le~~~~~~la~l~ 152 (476)
.+-.++++++++....+.. .++|--.+..+.++.+. ...+.|.+.-..+.||.+... +.--+....+++|.
T Consensus 57 ~sE~e~l~~l~~ia~kN~~~~sfiG~GyY~~~~P~vI~---rnile~pewyTaYTPYQpEISQGrLqaLfefQtlv~dLT 133 (450)
T COG0403 57 LSEYEALAELKEIASKNKVFTSFIGAGYYDTYTPPVIL---RNILENPEWYTAYTPYQPEISQGRLEALFEFQTLVADLT 133 (450)
T ss_pred CCHHHHHHHHHHHHhcCchhhhhccCcccCCcCcHHHH---HHhhcCccccccCCCCchhhhhHHHHHHHHHHHHHHHHh
Confidence 3567899999888766642 25663333333344443 233444433223344433222 22223457789999
Q ss_pred CCCCCcccEEEcCCchhHHHHHHHHHHhh--CCCcEEEecCCCchHHHHHHHHc----CCeEEEEeCCCCCccCHHHHHH
Q 011842 153 ELENNEYWGYITNCGTEGNLHGILVGREV--FPDGILYASRESHYSVFKAARMY----RMECVKVDCLISGEIDCADFKA 226 (476)
Q Consensus 153 g~~~~~~~g~~t~ggt~An~~al~aa~~~--~p~~~Vl~s~~~H~S~~~~~~~~----G~~v~~v~~~~~g~~D~~~Le~ 226 (476)
|++..+ .-..-++| |.-.|+.++... .+...++++...|+......+-. |++++.++.+ |.++|++
T Consensus 134 Gm~VAN--ASm~DeaT-AaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~-----d~~~l~~ 205 (450)
T COG0403 134 GLDVAN--ASMLDEAT-AAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDAD-----DLDDLES 205 (450)
T ss_pred CCCccc--chhhhhHH-HHHHHHHHHHHhhcCcCceEEecCCCCHHHHHHHHhhcccCceEEEEeccc-----hhhhhhh
Confidence 998543 22333443 333333333332 23679999999999877665543 6778877776 8888888
Q ss_pred HHHcCCCCcEEEEEeeCCCccc-cccCHHHHHHHHHHhCCCCCceEEEEecC-cccccccccccCCCCCCcccccEEEEc
Q 011842 227 KLLQNKDKPAIINVNIGTTVKG-AVDDLDLVIQTLEESGFTQDRFYIHCDGA-LFGLMMPFVKKAPKVSFKKPIGSVSVS 304 (476)
Q Consensus 227 ~l~~~~~~p~~vv~t~gtt~tG-~id~l~~I~~ia~~~g~~~~~~~lhvD~a-~~g~~~~~~~~~~~~~~~~~~Dsi~~s 304 (476)
+ ... . .+.+++..|. ..| .+.++.+|.+.++++|. +++|=.= .+-.++ + -.+.-++|+.+.+
T Consensus 206 ~-~~~-~-~~gv~vQyP~-~~G~~~~d~~~l~~~~h~~~a-----l~~v~aDplaL~LL---~----pPGe~GADIvvG~ 269 (450)
T COG0403 206 A-DDG-D-VFGVLVQYPN-TFGIVEEDLRALIEAAHSAGA-----LVIVAADPLALGLL---K----PPGEFGADIVVGS 269 (450)
T ss_pred c-ccc-C-eEEEEEecCC-CCCccchhHHHHHHHHhhcCC-----EEEEEechhHhhcc---C----CccccCCceEEec
Confidence 8 332 1 2467777776 456 77789999999999998 6654322 111111 1 1222348999999
Q ss_pred CCCCC----CCCCCceeEEeehhhhhhhcCC-----------cccc----------CCCC-CcccCCCCChhHHHHHHHH
Q 011842 305 GHKFV----GCPMPCGVQITRMEHINVLSSN-----------VEYL----------ASRD-ATIMGSRNGHAPIFLWYTL 358 (476)
Q Consensus 305 ~hK~l----~~p~~~G~l~~~~~~~~~l~~~-----------~~yl----------~~~~-~~~~~sr~~~~~l~~~~~l 358 (476)
.+-++ .+++.+|++.+++++.+.++-. ..|. .... .+=.||.....++.....+
T Consensus 270 ~QrfGvPmgfGGPhag~fA~~~~~~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSNICTnQaLlA~~As~y~ 349 (450)
T COG0403 270 AQRFGVPMGFGGPHAGYFAVKDEFKRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSNICTNQALLALAASMYA 349 (450)
T ss_pred CcccCCCcCCCCcceeeeeEhHhHhhcCCCceeeeeecCCCCchhhhhHHHHHHHHhhhccchhhhHHHHHHHHHHHHHH
Confidence 88654 2346689999999987665321 1111 0000 1112333223334444456
Q ss_pred HHhChhcHHHHHHHHHHHHHHHHHHHHhcC--CeEeecCCeeEEEEecCCc--HHH-----hhceeecc-cCCEEEEEEc
Q 011842 359 NRKGYKGFQKEVQKCLRNAHYLKDRLLDAG--ISAMLNELSSTVVFERPQD--EEF-----VRRWQLAC-QGNIAHVVVM 428 (476)
Q Consensus 359 ~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g--~~~~~~~~~~iv~f~~~~~--~~~-----~~~~~l~~-~~~~lRv~~~ 428 (476)
.++|.+|++++.++.++++.+|.++|++.+ +..+.......+.++.+.. ..+ ..++.+.. ....+-+++.
T Consensus 350 ~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~~~~~~~fFdt~~v~~~~~~~~~l~~~~~~~G~~L~~~~~~~~~ia~t 429 (450)
T COG0403 350 VYHGPQGLKEIAERIHRLAAYLAAGLKEIGAGVELVFDHFFDTFTVRVPEEVAEALLAAAIAGGINLRRVDADTVLIALT 429 (450)
T ss_pred HHhChHHHHHHHHHHHHHHHHHHHHHhhcCCceEeccccceeeEEEecchhHHHHHHHHHHhcCCceeeecCCceEEEee
Confidence 678999999999999999999999999654 5444343346677777631 111 22333321 2346678899
Q ss_pred CCCCHHHHHHHHHHHHHH
Q 011842 429 PNVTIDKLDDFLNELIEN 446 (476)
Q Consensus 429 ~~~T~edid~~~~~l~~~ 446 (476)
..+|++||+.|++++...
T Consensus 430 Et~t~~~i~~l~~~~~~~ 447 (450)
T COG0403 430 ETTTKEDIDALVAAFGGV 447 (450)
T ss_pred cccCHHHHHHHHHHHhhh
Confidence 999999999999998754
No 348
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.40 E-value=3.1e-10 Score=115.19 Aligned_cols=269 Identities=12% Similarity=0.062 Sum_probs=155.5
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHH-HHc-------CC----
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAA-RMY-------RM---- 206 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~-~~~-------G~---- 206 (476)
+...++.+.++++.+.+ ..+++++||+|+-.|+.+++....++.|++.+.+|......+ ... +.
T Consensus 66 ~~~~~la~~l~~~~~~~----~v~~~~SGseA~e~Alklar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~ 141 (364)
T PRK04013 66 EEKEEMLEELSKWVNYE----YVYMGNSGTEAVEAALKFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLV 141 (364)
T ss_pred HHHHHHHHHHHhhcCCC----EEEEeCchHHHHHHHHHHHHHHhCCCEEEEECCccccCchhhccCCCCcccccCCCCCC
Confidence 44455666677777654 389999999999999999987644467776666554432222 211 11
Q ss_pred -eEEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCcccccc-C---HHHHHHHHHHhCCCCCceEEEEecCcccc
Q 011842 207 -ECVKVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVD-D---LDLVIQTLEESGFTQDRFYIHCDGALFGL 281 (476)
Q Consensus 207 -~v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id-~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~ 281 (476)
.+..+|.+ |++.+++.+.++ ...|++.......|.+. | +++|.++|++||+ +++.|+++.|+
T Consensus 142 ~~~~~~~~~-----d~~~l~~~i~~~---~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gi-----llI~DEv~tG~ 208 (364)
T PRK04013 142 PGFKHIPFN-----DVEAAKEAITKE---TAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGA-----LLIADEVQSGL 208 (364)
T ss_pred CCcEEecCC-----CHHHHHHHhcCC---cEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCC-----EEEEechhhcC
Confidence 23334433 788899888643 34666655555545543 4 9999999999999 99999999865
Q ss_pred cccccccC--CCCCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHH
Q 011842 282 MMPFVKKA--PKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLN 359 (476)
Q Consensus 282 ~~~~~~~~--~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~ 359 (476)
- ....- ..+.+ ..|.++++ |.++.+.++|.++.+.+... ..+ ..|+.+.. .......+.++
T Consensus 209 -R-tG~~~a~~~~gv--~PDiv~~g--K~lggG~P~~a~~~~~~~~~-----~~~----~~T~~gnp--~~~aaa~a~l~ 271 (364)
T PRK04013 209 -R-TGKFLAIEHYKV--EPDIVTMG--KGIGNGVPVSLTLTNFDVER-----GKH----GSTFGGNP--LACKAVAVTLR 271 (364)
T ss_pred -C-CCchhHHHhcCC--CCCEEEec--ccccCCceeEEEEecccccC-----CCc----CCCCCcCH--HHHHHHHHHHH
Confidence 2 11110 01111 26888774 88887888999998765410 001 11222221 11222333444
Q ss_pred HhChhcHHHHHHHHHHHHHHHHHHHHhcCC-eEeecCCeeEEEEecCC-cHHH-----hhceeeccc-CCEEEEEEcCCC
Q 011842 360 RKGYKGFQKEVQKCLRNAHYLKDRLLDAGI-SAMLNELSSTVVFERPQ-DEEF-----VRRWQLACQ-GNIAHVVVMPNV 431 (476)
Q Consensus 360 ~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~-~~~~~~~~~iv~f~~~~-~~~~-----~~~~~l~~~-~~~lRv~~~~~~ 431 (476)
.+..+++.+.+++. | ..+.. +. ..+...+ .++.+.... ...+ .+++.+... .+.+|+.....+
T Consensus 272 ~i~~~~l~~~~~~~------l-~~l~~-~~v~~vRG~G-l~~gve~~~~~~~i~~~~~~~Gll~~~~g~~vlr~~Ppl~i 342 (364)
T PRK04013 272 ILRRERLVEKAGEK------F-IEIKG-ERVVTTRGRG-LMIGIVLKKPVGKYVEELQNRGYLVHTAGQRVIRLLPPLII 342 (364)
T ss_pred HHHhccHHHHHHHH------H-HHhcc-CcceeeeeCc-EEEEEEeCCcHHHHHHHHHhCCcEEeeCCCCEEEEeCCccc
Confidence 44444444333332 2 22222 21 1111122 222222222 1112 234444333 478999888889
Q ss_pred CHHHHHHHHHHHHHHHHHH
Q 011842 432 TIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 432 T~edid~~~~~l~~~~~~~ 450 (476)
|++++|.+++.|+++.+..
T Consensus 343 t~~~i~~~~~~l~~~l~~~ 361 (364)
T PRK04013 343 SKDTMEEAKSAIEGVINDI 361 (364)
T ss_pred CHHHHHHHHHHHHHHHHHH
Confidence 9999999999999988654
No 349
>PRK07482 hypothetical protein; Provisional
Probab=99.40 E-value=6.6e-10 Score=116.49 Aligned_cols=298 Identities=12% Similarity=0.028 Sum_probs=166.1
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhC------CCcEEEecCCCchHHHH-HHHHcCC-----
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVF------PDGILYASRESHYSVFK-AARMYRM----- 206 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~------p~~~Vl~s~~~H~S~~~-~~~~~G~----- 206 (476)
+.+.++.+.+.+++.-+. ...+|+++||+|+-.|++.+|... .+..|+.-+.+|..... +..+.|.
T Consensus 94 ~~~~~lAe~L~~~~p~~~--~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~ 171 (461)
T PRK07482 94 EASITLSKRIIDRAPAGM--SKVYYGLSGSDANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQ 171 (461)
T ss_pred HHHHHHHHHHHHhCCCCc--CEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhh
Confidence 666677888888764222 238899999999999999998531 13456654444433221 1111110
Q ss_pred -------eEEEEeCCC--C----C-------ccCHHHHHHHHHcC-CCCcEEEEEeeCCCccccccC----HHHHHHHHH
Q 011842 207 -------ECVKVDCLI--S----G-------EIDCADFKAKLLQN-KDKPAIINVNIGTTVKGAVDD----LDLVIQTLE 261 (476)
Q Consensus 207 -------~v~~v~~~~--~----g-------~~D~~~Le~~l~~~-~~~p~~vv~t~gtt~tG~id~----l~~I~~ia~ 261 (476)
.+..++... + + .-+++.|++.+... .+....|++.-.....|.+.| +++|.++|+
T Consensus 172 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~ 251 (461)
T PRK07482 172 HFDLPIARVLHTEAPHYYRRADAGMSEEQFSAYCADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLK 251 (461)
T ss_pred ccCCCCCCCEEcCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHH
Confidence 122232211 0 0 11467888888533 334556666543444465533 899999999
Q ss_pred HhCCCCCceEEEEecCcccccccccccCCCCCCcccccEEEEcCCCCCCCCC-CceeEEeehhhhhhhcCCccccC--CC
Q 011842 262 ESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKPIGSVSVSGHKFVGCPM-PCGVQITRMEHINVLSSNVEYLA--SR 338 (476)
Q Consensus 262 ~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~~Dsi~~s~hK~l~~p~-~~G~l~~~~~~~~~l~~~~~yl~--~~ 338 (476)
+||+ ++++|+++.|+--...-......+ -..|.+++. |.++.++ ++|.+++++++.+.+........ ..
T Consensus 252 ~~gi-----LlI~DEV~tGfGRtG~~~a~~~~g-v~PDiv~~g--Kgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h 323 (461)
T PRK07482 252 KYDI-----LLIADEVVTGFGRLGSMFGSDHYG-IEPDLITVA--KGLTSAYAPLSGSIVGEKVWDVLEQGSDEHGAIGH 323 (461)
T ss_pred HhCC-----EEEEeccccCCCcCcchhhHHhcC-CCCCEEEEc--cccccCccccceeeecHHHHHHHhcccccCCcccc
Confidence 9999 999999987652211000000111 127998875 9998886 88999999887665532111000 01
Q ss_pred CCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHh----cCCeE-eecCCe-eEEEEecCC------
Q 011842 339 DATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLD----AGISA-MLNELS-STVVFERPQ------ 406 (476)
Q Consensus 339 ~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~g~~~-~~~~~~-~iv~f~~~~------ 406 (476)
..|+.+ .+++..++++.+..-.-++..++..++.++|.+.|++ .+... +...+. .-+-|....
T Consensus 324 ~~T~~g-----npl~~Aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Glm~giel~~~~~~~~~~ 398 (461)
T PRK07482 324 GWTYSG-----HPICAAAALANLDILERENLVGNAAEVGAYFRARLRAAFGDHPLVGEVRGVGMLAAVEFVADRDDRTPF 398 (461)
T ss_pred CCCCCc-----CHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeeceeEEEEEeccCCCcCCCC
Confidence 112222 2344444444332111123556666777778777764 33321 112221 112232111
Q ss_pred c------HHH-----hhceeec--ccCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 011842 407 D------EEF-----VRRWQLA--CQGNIAHVVVMPNVTIDKLDDFLNELIENRSTWY 451 (476)
Q Consensus 407 ~------~~~-----~~~~~l~--~~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~ 451 (476)
+ ..+ .+++.+. ..++.+|+.....+|++|||.++++|+++.+++.
T Consensus 399 ~~~~~~~~~i~~~~~~~Gvl~~~~~~~~~i~~~Ppl~it~~ei~~~~~~l~~~l~~~~ 456 (461)
T PRK07482 399 DPALKIGPQVSAAALERGVIARAMPHGDILGFAPPLVLTRAEADEIVAIAKDAVDEVL 456 (461)
T ss_pred ChhhHHHHHHHHHHHHCCcEEecCCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 0 011 1222221 1357788888888999999999999999987753
No 350
>PRK06917 hypothetical protein; Provisional
Probab=99.39 E-value=6.4e-10 Score=116.12 Aligned_cols=296 Identities=13% Similarity=0.095 Sum_probs=165.2
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhh------CCCcEEEecCCCchHH-HHHHHHcCC-----
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREV------FPDGILYASRESHYSV-FKAARMYRM----- 206 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~------~p~~~Vl~s~~~H~S~-~~~~~~~G~----- 206 (476)
+.+.++.+.+.+++.... ...+|+++||+|+..|++.+|.. ..+..|+.-+.+|..+ .-+....+.
T Consensus 74 ~~~~~lae~L~~~~p~~~--~~v~f~~sGsEAve~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~ 151 (447)
T PRK06917 74 EPAEKLAKKLSDLSPGDL--NWSFFVNSGSEANETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQ 151 (447)
T ss_pred HHHHHHHHHHHHhCCCCC--CEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccc
Confidence 556678888888774321 35899999999999999999753 1234566555444333 222222221
Q ss_pred -------eEEEEeCCCCC------------ccCHHHHHHHHHcCC-CCcEEEEEeeCCCcc-ccccC----HHHHHHHHH
Q 011842 207 -------ECVKVDCLISG------------EIDCADFKAKLLQNK-DKPAIINVNIGTTVK-GAVDD----LDLVIQTLE 261 (476)
Q Consensus 207 -------~v~~v~~~~~g------------~~D~~~Le~~l~~~~-~~p~~vv~t~gtt~t-G~id~----l~~I~~ia~ 261 (476)
.+..+|..... .-|++.|++.++... +....|++.-..... |.+.| +++|.++|+
T Consensus 152 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~ 231 (447)
T PRK06917 152 RFVSLLEDYPTISAPYCYRCPVQKVYPTCQLACATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICD 231 (447)
T ss_pred cCCCCCCCCeEeCCCcccccccCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHH
Confidence 11222211000 013467788887543 344566665323322 34433 899999999
Q ss_pred HhCCCCCceEEEEecCccccccccccc-C-CCCCCcccccEEEEcCCCCCCCCC-CceeEEeehhhhhhhcCCccccCCC
Q 011842 262 ESGFTQDRFYIHCDGALFGLMMPFVKK-A-PKVSFKKPIGSVSVSGHKFVGCPM-PCGVQITRMEHINVLSSNVEYLASR 338 (476)
Q Consensus 262 ~~g~~~~~~~lhvD~a~~g~~~~~~~~-~-~~~~~~~~~Dsi~~s~hK~l~~p~-~~G~l~~~~~~~~~l~~~~~yl~~~ 338 (476)
+||+ ++++|+++.|+--. ... . ..+.. ..|.+++ .|.++.++ ++|+++.++++.+.+......+..
T Consensus 232 ~~g~-----llI~DEv~tGfGRt-G~~~a~~~~gv--~PDi~~~--gK~l~~G~~Pi~a~~~~~~i~~~~~~~~~~~~~- 300 (447)
T PRK06917 232 HYDI-----LFIADEVMTGLGRT-GAMFAMEHWGV--EPDIMTL--GKGLGAGYTPIAATVVSDRVMEPILRGSRSIMS- 300 (447)
T ss_pred HcCC-----EEEEechhhCcCcc-cchhhHHhcCC--CCCEEEe--eehhccCCcceEEEEEcHHHHHHHhccCccccc-
Confidence 9999 99999999764211 111 0 01111 2688766 49998776 899999998877665322111110
Q ss_pred CCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhc----CCeE-eecCCee-EEEEecC------C
Q 011842 339 DATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDA----GISA-MLNELSS-TVVFERP------Q 406 (476)
Q Consensus 339 ~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----g~~~-~~~~~~~-iv~f~~~------~ 406 (476)
..|+.+. ++...++++.+..-.-++..++..++.++|++.|++. +... +...+.. -+-|..+ .
T Consensus 301 ~~T~~gn-----pl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~ie~~~~~~~~~~~ 375 (447)
T PRK06917 301 GHTLSAN-----PLSAATALAVLEYMEKHNLPEKAAEKGEYLIKGLQKVQQQSTIIGDVRGKGLLIGVEFVADKKTKQPF 375 (447)
T ss_pred ccCCCCC-----HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeecceEEEEEEeccCCcCCCC
Confidence 0122222 3333333333311111245667777778888887763 3211 1112221 1223211 0
Q ss_pred --cHHH---------hhceeecc--------cCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHh
Q 011842 407 --DEEF---------VRRWQLAC--------QGNIAHVVVMPNVTIDKLDDFLNELIENRSTWYE 452 (476)
Q Consensus 407 --~~~~---------~~~~~l~~--------~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~~ 452 (476)
+.+. .+++.+.. .++.+|++....+|++|||.++++|.++.+++.+
T Consensus 376 ~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~g~~~~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~~ 440 (447)
T PRK06917 376 SKSQAVASELISVAAKNGLLLYPAVAGQDGKEGDAVIIAPPMTITYSELDELLSIFAKSVEEMMQ 440 (447)
T ss_pred cchhHHHHHHHHHHHhCCcEEEecccccCCCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHHHHH
Confidence 1111 12333321 1467887777779999999999999999988755
No 351
>PRK07481 hypothetical protein; Provisional
Probab=99.39 E-value=7.9e-10 Score=115.55 Aligned_cols=299 Identities=11% Similarity=0.087 Sum_probs=164.1
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhC------CCcEEEecCCCchHH-HHHHHHcCC-----
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVF------PDGILYASRESHYSV-FKAARMYRM----- 206 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~------p~~~Vl~s~~~H~S~-~~~~~~~G~----- 206 (476)
+.+.++.+.+.++++-+ .-...+|+++||+|+-.|++.||... .+..|+.-+.+|..+ .-+....+-
T Consensus 86 ~~~~~lae~L~~~~~~~-~~~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~ 164 (449)
T PRK07481 86 PRAIELSYELIDMFAPE-GMRRVFFSSGGSDSVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRR 164 (449)
T ss_pred HHHHHHHHHHHHhcCCC-CCCEEEEcCchHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCccccc
Confidence 55667788888887421 11248999999999999999998742 234455544444332 222221111
Q ss_pred -------eEEEEeCCCC-----CccCHHH--------HHHHHH-cCCCCcEEEEEeeCCCccccccC----HHHHHHHHH
Q 011842 207 -------ECVKVDCLIS-----GEIDCAD--------FKAKLL-QNKDKPAIINVNIGTTVKGAVDD----LDLVIQTLE 261 (476)
Q Consensus 207 -------~v~~v~~~~~-----g~~D~~~--------Le~~l~-~~~~~p~~vv~t~gtt~tG~id~----l~~I~~ia~ 261 (476)
.+..++.... +.-|++. ||+.|. ...+.+..|++.-.....|.+-| +++|.++|+
T Consensus 165 ~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~ 244 (449)
T PRK07481 165 NYEPLLPGCFHVETPWLYRNPFTEQDPEELARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCD 244 (449)
T ss_pred ccCCCCCCCEEeCCCcccccccCCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHH
Confidence 1233332110 0013333 445454 22344566766655556676654 999999999
Q ss_pred HhCCCCCceEEEEecCccccccccccc-CCCCCCcccccEEEEcCCCCCCCCC-CceeEEeehhhhhhhcCCccccCCCC
Q 011842 262 ESGFTQDRFYIHCDGALFGLMMPFVKK-APKVSFKKPIGSVSVSGHKFVGCPM-PCGVQITRMEHINVLSSNVEYLASRD 339 (476)
Q Consensus 262 ~~g~~~~~~~lhvD~a~~g~~~~~~~~-~~~~~~~~~~Dsi~~s~hK~l~~p~-~~G~l~~~~~~~~~l~~~~~yl~~~~ 339 (476)
+||+ +++.|+++.|+--...-. ...+.. ..|+++++ |.++.++ ++|.+++++++.+.+......- ..
T Consensus 245 ~~g~-----llI~DEV~tGfGRtG~~~a~~~~gv--~PDiv~~g--Kgl~gG~~Pi~av~~~~~i~~~~~~~~~~~--~~ 313 (449)
T PRK07481 245 RHGI-----LLIADEVVTGFGRTGSWFGSRGWGV--KPDIMCLA--KGITSGYVPLGATMVNARIADAFEANADFG--GA 313 (449)
T ss_pred HcCC-----EEEEeehhhCcCcCchhhHhhhcCC--CCCEEEEe--ecccCCCcCceEEEEcHHHHHHHhccCccc--cc
Confidence 9999 999999987642211000 001111 26888875 9888774 8999999998776653221100 00
Q ss_pred CcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhc----CCeE-eecCCeeE-EEEecCC------c
Q 011842 340 ATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDA----GISA-MLNELSST-VVFERPQ------D 407 (476)
Q Consensus 340 ~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----g~~~-~~~~~~~i-v~f~~~~------~ 407 (476)
....+|-.+ .++...++++.+..-.-.+..++..++.++|.+.|++. +... +...+..+ +-|..+. +
T Consensus 314 ~~h~~T~~g-npl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Glm~gi~l~~~~~~~~~~~ 392 (449)
T PRK07481 314 IMHGYTYSG-HPVACAAALATLDIVVREDLPANAAKRGAYLLEGLQPLKERFELVGDVRGKGLMLALDLVADKATREPID 392 (449)
T ss_pred cccCCCCCC-CHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcCCCeEEEeecceEEEEEecccccccCCCC
Confidence 000112111 23444444444322122346677777788888887763 2211 11222211 1222110 1
Q ss_pred --HHH---------hhceeecccCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 011842 408 --EEF---------VRRWQLACQGNIAHVVVMPNVTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 408 --~~~---------~~~~~l~~~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~ 450 (476)
... .+++.+...++.+|++....+|++|||.++++|.++.+++
T Consensus 393 ~~~~~~~~~~~~~~~~Gvl~~~~g~~i~l~Ppl~it~~eid~~~~~l~~~l~~~ 446 (449)
T PRK07481 393 PSKGYANAVADVARENGVLVRPSGTKIILSPPLVIQREDVDRIVDALDAGLSAV 446 (449)
T ss_pred chhHHHHHHHHHHHhCCeEEEecCCEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 111 1233333345567776666679999999999999988653
No 352
>PRK07480 putative aminotransferase; Validated
Probab=99.39 E-value=7.9e-10 Score=115.67 Aligned_cols=296 Identities=14% Similarity=0.073 Sum_probs=164.4
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhC-----C-CcEEEecCCC-chHHHHHHHHcCC-----
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVF-----P-DGILYASRES-HYSVFKAARMYRM----- 206 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~-----p-~~~Vl~s~~~-H~S~~~~~~~~G~----- 206 (476)
+.+.++.+.+++++..+. ...+|+++||+|+..|+.++|... + +..|+.-..+ |.....+....|.
T Consensus 94 ~~~~~lae~L~~~~p~~~--~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~ 171 (456)
T PRK07480 94 PPAIELAAKLAEVAPPGF--NHVFFTNSGSEANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHE 171 (456)
T ss_pred HHHHHHHHHHHHhCCCCc--CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhc
Confidence 566677888888774322 248999999999999999998741 2 3455554443 4332222222221
Q ss_pred -------eEEEEeCCCC------C------ccCHHHHHHHHHcC-CCCcEEEEEeeCCCccccccC----HHHHHHHHHH
Q 011842 207 -------ECVKVDCLIS------G------EIDCADFKAKLLQN-KDKPAIINVNIGTTVKGAVDD----LDLVIQTLEE 262 (476)
Q Consensus 207 -------~v~~v~~~~~------g------~~D~~~Le~~l~~~-~~~p~~vv~t~gtt~tG~id~----l~~I~~ia~~ 262 (476)
.+..++.... . ...++.|++.+.+. .+....|++.-.....|.+.| +++|.++|++
T Consensus 172 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~ 251 (456)
T PRK07480 172 QGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAARQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRK 251 (456)
T ss_pred ccCCCCCCCeecCCCcccccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHH
Confidence 1222221100 0 01136676666433 344556666544555677665 9999999999
Q ss_pred hCCCCCceEEEEecCcccccccccccCCCCCCcccccEEEEcCCCCCCCCC-CceeEEeehhhhhhhcC-CccccCCCCC
Q 011842 263 SGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKPIGSVSVSGHKFVGCPM-PCGVQITRMEHINVLSS-NVEYLASRDA 340 (476)
Q Consensus 263 ~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~~Dsi~~s~hK~l~~p~-~~G~l~~~~~~~~~l~~-~~~yl~~~~~ 340 (476)
||+ ++++|+++.|+--...-......+ -..|.++++ |.++.++ ++|.+++++++.+.+.. ...+. ...
T Consensus 252 ~g~-----llI~DEV~tGfGRtG~~~a~~~~g-v~PDiv~~g--K~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~--~~~ 321 (456)
T PRK07480 252 YDI-----LLVADEVICGFGRTGEWFGSQHFG-IKPDLMTIA--KGLTSGYIPMGAVGVGDRVAEVLIEEGGEFN--HGF 321 (456)
T ss_pred cCC-----EEEEechhhCCCcCcchhhhhhcC-CCCCeeeee--hhhccCCccceEEEEcHHHHHHHhcCCCCcc--cCC
Confidence 999 999999997642111000000111 126877764 9888775 79999999887766521 11111 112
Q ss_pred cccCCCCChhHHHHHH---HHHHhChhcHHHHHHHH-HHHHHHHHHHHHhc---CCe-EeecCCe-eEEEEecCC-----
Q 011842 341 TIMGSRNGHAPIFLWY---TLNRKGYKGFQKEVQKC-LRNAHYLKDRLLDA---GIS-AMLNELS-STVVFERPQ----- 406 (476)
Q Consensus 341 ~~~~sr~~~~~l~~~~---~l~~~g~~g~~~~~~~~-~~~a~~l~~~L~~~---g~~-~~~~~~~-~iv~f~~~~----- 406 (476)
|+.+. ++...+ +|+.+..+ +..++. .++.++|.+.|++. +.. .+...+. .-+-|..+.
T Consensus 322 T~~gn-----pl~~Aaa~a~L~~l~~~---~l~~~~~~~~g~~l~~~l~~l~~~~~i~~vrG~Glm~gie~~~~~~~~~~ 393 (456)
T PRK07480 322 TYSGH-----PVAAAVALANLRILRDE---GIVERVRDDTGPYLQKRLRELADHPLVGEVRGVGLVGAIELVKDKATRER 393 (456)
T ss_pred CCCcC-----HHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHhhcCCCeeeEEeecceEEEEEecccccccc
Confidence 33333 344333 44444333 344555 35666777777653 321 1111221 112232111
Q ss_pred --c-----HHH-----hhceeecccCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhcC
Q 011842 407 --D-----EEF-----VRRWQLACQGNIAHVVVMPNVTIDKLDDFLNELIENRSTWYEDG 454 (476)
Q Consensus 407 --~-----~~~-----~~~~~l~~~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~~~~ 454 (476)
+ ..+ .+++.+...++.+|+.....+|++|||.++++|.++.+++.+..
T Consensus 394 ~~~~~~~~~~~~~~~~~~Gll~~~~~~~l~~~Ppl~it~~eid~~~~~l~~al~~~~~~~ 453 (456)
T PRK07480 394 FEAGGGVGTICRDHCFANGLIMRAVGDRMIISPPLVITHAEIDELVEKARKALDATAAEL 453 (456)
T ss_pred CcchhhHHHHHHHHHHHCCcEEeecCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 0 011 12333333457788777777799999999999999988765543
No 353
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.39 E-value=1.1e-09 Score=114.77 Aligned_cols=294 Identities=13% Similarity=0.049 Sum_probs=169.5
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhh----C--CCcEEEecCCC-chHHHHHHHHcCC-----
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREV----F--PDGILYASRES-HYSVFKAARMYRM----- 206 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~----~--p~~~Vl~s~~~-H~S~~~~~~~~G~----- 206 (476)
+...++.+.+++++..+. ...+|+++||+|+-.|+..+|.. . .+..|+.-..+ |....-+..+.|-
T Consensus 90 ~~~~~lae~L~~~~p~~~--~~v~f~~sGsEAve~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~ 167 (466)
T PRK07030 90 EPVIELSERLVKITPPGL--SRCFYADNGSSAIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTE 167 (466)
T ss_pred HHHHHHHHHHHHhCCCCc--CEEEEeCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccc
Confidence 556677888888764222 24899999999999999999764 1 23445544444 4333233322221
Q ss_pred -------eEEEEeCCCC-----C-------ccCHHHHHHHHHcCCCCcEEEEEee-CCCccccccC----HHHHHHHHHH
Q 011842 207 -------ECVKVDCLIS-----G-------EIDCADFKAKLLQNKDKPAIINVNI-GTTVKGAVDD----LDLVIQTLEE 262 (476)
Q Consensus 207 -------~v~~v~~~~~-----g-------~~D~~~Le~~l~~~~~~p~~vv~t~-gtt~tG~id~----l~~I~~ia~~ 262 (476)
.+..+|.... + .-+++.|++.+.+.......|++.- .....|.+.| +++|.++|++
T Consensus 168 ~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~ 247 (466)
T PRK07030 168 TYKPLLLDTIKVPSPDCYLRPEGMSWEEHSRRMFAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDR 247 (466)
T ss_pred cCCccCCCCEEcCCCCccccccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHH
Confidence 1233332210 0 1135677888875555556666654 2444465543 8999999999
Q ss_pred hCCCCCceEEEEecCcccccccccccC-CCCCCcccccEEEEcCCCCCCCCC-CceeEEeehhhhhhhcCCc----cccC
Q 011842 263 SGFTQDRFYIHCDGALFGLMMPFVKKA-PKVSFKKPIGSVSVSGHKFVGCPM-PCGVQITRMEHINVLSSNV----EYLA 336 (476)
Q Consensus 263 ~g~~~~~~~lhvD~a~~g~~~~~~~~~-~~~~~~~~~Dsi~~s~hK~l~~p~-~~G~l~~~~~~~~~l~~~~----~yl~ 336 (476)
||+ ++++|+++.|+--...-.. ..+.. ..|.+++. |.++.++ ++|.+++++++.+.+.... .+..
T Consensus 248 ~g~-----llI~DEV~TGfGRtG~~~a~~~~gv--~PDiv~~g--Kgl~gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~h 318 (466)
T PRK07030 248 YGV-----HLIHDEIAVGFGRTGTMFACEQAGI--RPDFLCLS--KALTGGYLPLAAVLTTDTVYQAFYDDYPTLRAFLH 318 (466)
T ss_pred cCC-----EEEEeehhhCcCccccchHHHhcCC--CCCEEeee--hhccCCcccceEEEecHHHHHHHhccccccccccc
Confidence 999 9999999866421110000 01111 26888875 9888885 8999999999876653211 1111
Q ss_pred CCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhc---CCeE-eecCCeeEEEEec--CC----
Q 011842 337 SRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDA---GISA-MLNELSSTVVFER--PQ---- 406 (476)
Q Consensus 337 ~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~---g~~~-~~~~~~~iv~f~~--~~---- 406 (476)
..|+.+ .+++..++++.+..-.-++.+++..++.++|++.|++. +... +...+ .++.+.. ..
T Consensus 319 --~~T~~g-----npla~aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l~~~~~v~~vrG~G-l~~gie~~~~~~~~~ 390 (466)
T PRK07030 319 --SHSYTG-----NPLACAAALATLDIFEQDNVIENNRALARRMAEATAHLADHPHVAEVRQTG-MILAIEMVQDKASKT 390 (466)
T ss_pred --CCCCCC-----CHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCEEEeEece-eEEEEEeccCccccc
Confidence 112222 23333333333321111345677778888888888764 2111 11111 2222221 11
Q ss_pred ----cH----HH-----hhceeecccCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 011842 407 ----DE----EF-----VRRWQLACQGNIAHVVVMPNVTIDKLDDFLNELIENRSTWY 451 (476)
Q Consensus 407 ----~~----~~-----~~~~~l~~~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~ 451 (476)
.. .+ .+++.+...++.+|+.....+|++|||.+++.|+++.+++.
T Consensus 391 ~~~~~~~~~~~i~~~~~~~Gvl~~~~g~~i~~~Ppl~it~~eid~~~~~l~~al~~~~ 448 (466)
T PRK07030 391 PYPWQERRGLKVYQHALERGALLRPLGSVVYFLPPYVITPEQIDFLAEVASEGIDIAT 448 (466)
T ss_pred cCcchhHHHHHHHHHHHHCCeEEEecCCEEEEECCccCCHHHHHHHHHHHHHHHHHHh
Confidence 00 11 12333333357788888888999999999999999998874
No 354
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.39 E-value=8.3e-10 Score=115.27 Aligned_cols=294 Identities=11% Similarity=0.047 Sum_probs=162.8
Q ss_pred HHHHHHHHHHHHHcCCCCCccc-EEEcCCchhHHHHHHHHHHhhCCCcEEEecCCC-chHHHHHHHHcCC----------
Q 011842 139 QFEVGVLDWFARLWELENNEYW-GYITNCGTEGNLHGILVGREVFPDGILYASRES-HYSVFKAARMYRM---------- 206 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~-g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~-H~S~~~~~~~~G~---------- 206 (476)
+...++.+.+.+++.-...... .+++++||+|+-.|++.||....+..|++-..+ |....-+..+.|-
T Consensus 82 ~~~~~lae~L~~~~p~~~~~~~~~f~~~sGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~ 161 (442)
T TIGR00709 82 PLKDAFIEALLNIIPKRKMDYKLQFPGPSGADAVEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGML 161 (442)
T ss_pred HHHHHHHHHHHHhCCCcCCCccEEEeCCCHHHHHHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCC
Confidence 5666778888887743211112 445689999999999999976444555554444 4433333333221
Q ss_pred --eEEEEeCCCCCcc--------CH----HHHHHHHHc---CCCCcEEEEEeeCCCccccccC----HHHHHHHHHHhCC
Q 011842 207 --ECVKVDCLISGEI--------DC----ADFKAKLLQ---NKDKPAIINVNIGTTVKGAVDD----LDLVIQTLEESGF 265 (476)
Q Consensus 207 --~v~~v~~~~~g~~--------D~----~~Le~~l~~---~~~~p~~vv~t~gtt~tG~id~----l~~I~~ia~~~g~ 265 (476)
.+..+|.....+. +. +.+++.+.. .......|++.......|.+.| +++|.++|++||+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~ 241 (442)
T TIGR00709 162 MPGVQFMPYPHEYRCPFGIGGEAGSNASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDI 241 (442)
T ss_pred CCCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCC
Confidence 2333433211111 11 224444432 1223445666544555565532 8999999999999
Q ss_pred CCCceEEEEecCcccccccccccCCCCCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCC
Q 011842 266 TQDRFYIHCDGALFGLMMPFVKKAPKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGS 345 (476)
Q Consensus 266 ~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~s 345 (476)
++++|+++.|+.... +....-.+.-..|.+++ .|.++.++++|+++.+++ .+.+.. ... ..|+.+
T Consensus 242 -----llI~DEV~tGfGRtG-~~~a~~~~gv~PDiv~~--gK~l~~G~Pigav~~~~~-~~~~~~--~~~---~~T~~g- 306 (442)
T TIGR00709 242 -----KLILDEVQAGFGRSG-TMFAFEHAGIEPDFVVM--SKAVGGGLPLAVLLIAPE-FDAWQP--AGH---TGTFRG- 306 (442)
T ss_pred -----EEEEeccccCCCCCC-chhHHHHcCCCCcEEEE--cccccCCcccEEEEEchH-HhccCC--CcC---CCCCCc-
Confidence 999999998753321 11000001112688885 588888899999999887 443321 110 122222
Q ss_pred CCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhc----CCeE-eecCCe-eEEEEecCC-----------cH
Q 011842 346 RNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDA----GISA-MLNELS-STVVFERPQ-----------DE 408 (476)
Q Consensus 346 r~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----g~~~-~~~~~~-~iv~f~~~~-----------~~ 408 (476)
.++++.+++..+..-.-++..++..++.++|.+.|++. +... +...+. .-+-|..+. +.
T Consensus 307 ----npla~aaa~a~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~ 382 (442)
T TIGR00709 307 ----NQLAMVTGTEALNYWKDDNLAQNAQERGERITSFLDDMIKEHPCIGNVRGRGLMQGIMIVDERQSKDATGAYPRDC 382 (442)
T ss_pred ----CHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEEccCcccccccccCCcch
Confidence 23444444443321111245567777788888888763 3211 112221 112232111 01
Q ss_pred HH---------hhceeecc---cCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 011842 409 EF---------VRRWQLAC---QGNIAHVVVMPNVTIDKLDDFLNELIENRSTWY 451 (476)
Q Consensus 409 ~~---------~~~~~l~~---~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~ 451 (476)
.. .+++.+.. .++.+|+.....+|++|||.++++++++.++..
T Consensus 383 ~~~~~~~~~~~~~Gvl~~~~~~~~~~l~~~Ppl~it~~ei~~~~~~l~~~l~~~~ 437 (442)
T TIGR00709 383 ELAAAIQGACFENGLLLETGGREGEVFRLLCPITIDQEECEEGISRFKQAVEEAL 437 (442)
T ss_pred HHHHHHHHHHHHCCeEEeecCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 11 12333322 257889999889999999999999999887653
No 355
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.38 E-value=1.1e-09 Score=114.91 Aligned_cols=295 Identities=14% Similarity=0.068 Sum_probs=169.6
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhh-----CC-CcEEEecCC-CchHHHHHHHHcCC-----
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREV-----FP-DGILYASRE-SHYSVFKAARMYRM----- 206 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~-----~p-~~~Vl~s~~-~H~S~~~~~~~~G~----- 206 (476)
+.+.++.+.+++++.... ...+|+++||+|+-.|+..+|.. .+ +..|+.-+. -|.....+..+.|-
T Consensus 99 ~~~~~lae~L~~~~p~~~--~~v~f~~SGseAve~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~ 176 (460)
T PRK06916 99 VPSILLAEKLIEVVPEGL--KKVFYSDSGATAVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQ 176 (460)
T ss_pred HHHHHHHHHHHHhCCCCC--CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCccccc
Confidence 556678888888774321 24899999999999999999863 12 344554444 44433333333221
Q ss_pred -------eEEEEeCCC-----CC-------ccCHHHHHHHHHcCCCCcEEEEEee-CCCccccccC----HHHHHHHHHH
Q 011842 207 -------ECVKVDCLI-----SG-------EIDCADFKAKLLQNKDKPAIINVNI-GTTVKGAVDD----LDLVIQTLEE 262 (476)
Q Consensus 207 -------~v~~v~~~~-----~g-------~~D~~~Le~~l~~~~~~p~~vv~t~-gtt~tG~id~----l~~I~~ia~~ 262 (476)
.+..+|... .+ .-+++.+++.++........|++.- .....|.+.| +++|.++|++
T Consensus 177 ~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~ 256 (460)
T PRK06916 177 VYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTK 256 (460)
T ss_pred ccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHH
Confidence 123333210 00 1246778888875545556666654 2445565532 8999999999
Q ss_pred hCCCCCceEEEEecCccccccccccc-CCCCCCcccccEEEEcCCCCCCCCC-CceeEEeehhhhhhhcCCc----cccC
Q 011842 263 SGFTQDRFYIHCDGALFGLMMPFVKK-APKVSFKKPIGSVSVSGHKFVGCPM-PCGVQITRMEHINVLSSNV----EYLA 336 (476)
Q Consensus 263 ~g~~~~~~~lhvD~a~~g~~~~~~~~-~~~~~~~~~~Dsi~~s~hK~l~~p~-~~G~l~~~~~~~~~l~~~~----~yl~ 336 (476)
||+ ++++|+++.|+--. .+. .....+ -..|.+++ .|.++.++ ++|+++.++++.+.+.... .+..
T Consensus 257 ~g~-----llI~DEV~TG~GRt-G~~~a~~~~g-v~PDiv~~--gK~l~gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~~ 327 (460)
T PRK06916 257 YNV-----LFITDEVATGFGRT-GKMFACEHEN-VTPDIMTA--GKGLTGGYLPIAITVTTDEIYNAFYGDYEEQKTFFH 327 (460)
T ss_pred cCC-----EEEeechhhCCCcC-chhhHHHhcC-CCCCeeee--ehhhhcCccccceeeecHHHHHHhhccccccCcccc
Confidence 999 99999998664211 111 000111 12688876 48888784 8999999998776553211 1110
Q ss_pred CCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhc---CCe-EeecCCe-eEEEEecCC-----
Q 011842 337 SRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDA---GIS-AMLNELS-STVVFERPQ----- 406 (476)
Q Consensus 337 ~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~---g~~-~~~~~~~-~iv~f~~~~----- 406 (476)
..|+.+ .++...++++.+..-.-++..++..++.++|.+.|++. +.. .+...+. .-+-|..+.
T Consensus 328 --~~T~~g-----npl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Glm~giel~~~~~~~~~ 400 (460)
T PRK06916 328 --GHSYTG-----NPLGCAVALANLELYEKTNLIEQVARKTEYVATQLEDLFALKHVGDIRQLGLMVGIELVKNKETKEP 400 (460)
T ss_pred --CCCCCC-----CHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhcCCCeEEeecCCceeeEEeecccccccC
Confidence 112222 23444444443321111345677788888888888774 211 1111221 112222111
Q ss_pred ---c----HHH-----hhceeecccCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 011842 407 ---D----EEF-----VRRWQLACQGNIAHVVVMPNVTIDKLDDFLNELIENRSTWY 451 (476)
Q Consensus 407 ---~----~~~-----~~~~~l~~~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~ 451 (476)
+ ..+ .+++.+...++.+|+.....+|++|||.++++|+++++++.
T Consensus 401 ~~~~~~~~~~i~~~~~~~Gvl~~~~g~~l~~~Ppl~it~~~id~~~~~l~~~l~~~~ 457 (460)
T PRK06916 401 FEWTERVGVQVCKRSRELGMLTRPLGNTIVFMPPLASTIDELDEMLRILYKAISDVT 457 (460)
T ss_pred CCchhhHHHHHHHHHHHCCeEEEecCCEEEEeCCcccCHHHHHHHHHHHHHHHHhhc
Confidence 0 011 12333434457888888888999999999999999987654
No 356
>PRK07036 hypothetical protein; Provisional
Probab=99.37 E-value=1.8e-09 Score=113.23 Aligned_cols=294 Identities=12% Similarity=0.055 Sum_probs=165.4
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhC------CCcEEEecCCC-chHHHHHHHHcCC-----
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVF------PDGILYASRES-HYSVFKAARMYRM----- 206 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~------p~~~Vl~s~~~-H~S~~~~~~~~G~----- 206 (476)
+.+.++.+.+.+++.-+. ...+|+++||+|+..|++.+|... .+..|+.-+.+ |....-+..+.|-
T Consensus 95 ~~~~~lae~L~~~~p~~~--~~v~f~~sGseAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~ 172 (466)
T PRK07036 95 APAAELAAKLAELAPGDL--NHVFLTTGGSTAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRT 172 (466)
T ss_pred HHHHHHHHHHHHhCCCCc--CEEEEeCCchHHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccc
Confidence 556677777877764221 248999999999999999998641 13455544444 4332222222221
Q ss_pred -------eEEEEeCCCC----Ccc--------CHHHHHHHHHc-CCCCcEEEEEeeCCCccccccC----HHHHHHHHHH
Q 011842 207 -------ECVKVDCLIS----GEI--------DCADFKAKLLQ-NKDKPAIINVNIGTTVKGAVDD----LDLVIQTLEE 262 (476)
Q Consensus 207 -------~v~~v~~~~~----g~~--------D~~~Le~~l~~-~~~~p~~vv~t~gtt~tG~id~----l~~I~~ia~~ 262 (476)
.+..+|.... ..+ .++.+++.+.. ..+.+..|++.-.....|.+.| +++|.++|++
T Consensus 173 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~ 252 (466)
T PRK07036 173 EFDYASDLVHHLSSPNPYRRPAGMSEAAFCDFLVDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRR 252 (466)
T ss_pred cccCCCCCcEEecCCcccccccCCChHHHHHHHHHHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHH
Confidence 1333332110 011 13456666653 3345667777655666777776 9999999999
Q ss_pred hCCCCCceEEEEecCcccccccccc-cCC-CCCCcccccEEEEcCCCCCCCCC-CceeEEeehhhhhhhcCC----cccc
Q 011842 263 SGFTQDRFYIHCDGALFGLMMPFVK-KAP-KVSFKKPIGSVSVSGHKFVGCPM-PCGVQITRMEHINVLSSN----VEYL 335 (476)
Q Consensus 263 ~g~~~~~~~lhvD~a~~g~~~~~~~-~~~-~~~~~~~~Dsi~~s~hK~l~~p~-~~G~l~~~~~~~~~l~~~----~~yl 335 (476)
||+ ++++|+++.|+--...- ... .+.. ..|+++++ |.++.++ ++|.+++++++.+.+... ..|.
T Consensus 253 ~g~-----llI~DEV~tGfGRtG~~~~~~~~~gv--~PDivt~g--K~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~ 323 (466)
T PRK07036 253 YDI-----LYISDEVVTGFGRLGHFFASEAVFGI--QPDIITFA--KGLTSGYQPLGAVIISERLLDVISGPNAKGNVFT 323 (466)
T ss_pred cCC-----EEEEeechhCCCcCchhhhhhhhcCC--CCCEEEEc--cccccCccccEEEEEcHHHHHHHhcccCcCcccc
Confidence 999 99999999664211100 000 0111 26888775 9888774 799999999887665321 0121
Q ss_pred CCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhc---CCeE-eecCCe-eEEEEecCC----
Q 011842 336 ASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDA---GISA-MLNELS-STVVFERPQ---- 406 (476)
Q Consensus 336 ~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~---g~~~-~~~~~~-~iv~f~~~~---- 406 (476)
. ..|+.+ .++...++++.+..-.-++..++..++.++|++.|++. +... +...+. .-+-|..+.
T Consensus 324 ~--~~T~~g-----npl~~aaa~a~Le~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~~ve~~~~~~~~~ 396 (466)
T PRK07036 324 H--GFTYSG-----HPVACAAALKNIEIMEREGLCEHVREVGPYFEERLASLRELPLVGDVRGDHLMACVECVADKGSKA 396 (466)
T ss_pred c--CCCCCC-----CHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhccCCCEEEEEeeceEEEEEEccCccccC
Confidence 1 112232 23444444443321111346677778888888888763 2111 111121 112232111
Q ss_pred ----cHH----H-----hhceeecccCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 011842 407 ----DEE----F-----VRRWQLACQGNIAHVVVMPNVTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 407 ----~~~----~-----~~~~~l~~~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~ 450 (476)
+.. + .+++.+...++.+|++....+|++|||.++++|.++.+.+
T Consensus 397 ~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~l~Ppl~it~~~id~~~~~l~~al~~~ 453 (466)
T PRK07036 397 LLPEDIAIGQRIDRHCQERGLLVRPLEHLCVLSPPLIITRAQIDEIVAILRAAIEET 453 (466)
T ss_pred CCCchhHHHHHHHHHHHHCCcEEeecCCEEEEeCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 001 1 1233333334667766666679999999999998887665
No 357
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.37 E-value=1.2e-09 Score=114.55 Aligned_cols=294 Identities=10% Similarity=-0.002 Sum_probs=163.6
Q ss_pred HHHHHHHHHHHHHcCCC---CCcccEEEcCCchhHHHHHHHHHHhhC-----C-CcEEEecCCCchHH-HHHHHHcCC--
Q 011842 139 QFEVGVLDWFARLWELE---NNEYWGYITNCGTEGNLHGILVGREVF-----P-DGILYASRESHYSV-FKAARMYRM-- 206 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~---~~~~~g~~t~ggt~An~~al~aa~~~~-----p-~~~Vl~s~~~H~S~-~~~~~~~G~-- 206 (476)
+...++.+.+.+++.-. .+-...+|+++||+||-.|+..+|... + +..|+.-+.+|... .-+....|.
T Consensus 107 ~~~~~lae~L~~~~p~~~~~~~~~~v~f~~sGSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~ 186 (472)
T PRK08742 107 EPAVQLAEQLLAIAPRQDGRAPLSKVFYADNGSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPL 186 (472)
T ss_pred HHHHHHHHHHHHhCCCcccCCCCCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcc
Confidence 44567777888776421 011248999999999999999998751 1 34555544444332 222222221
Q ss_pred ----------eEEEEeCCCC-----C-------ccCHHHHHHHHHcCCCCcEEEEEee-CCCccccccC----HHHHHHH
Q 011842 207 ----------ECVKVDCLIS-----G-------EIDCADFKAKLLQNKDKPAIINVNI-GTTVKGAVDD----LDLVIQT 259 (476)
Q Consensus 207 ----------~v~~v~~~~~-----g-------~~D~~~Le~~l~~~~~~p~~vv~t~-gtt~tG~id~----l~~I~~i 259 (476)
++..+|.... + .-+++.+++.+.........|++.- .....|.+.| ++++.++
T Consensus 187 ~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~l 266 (472)
T PRK08742 187 YRRVYAPLLLESLFAPSPDAYLAEPGQSAEDYALQAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRAREL 266 (472)
T ss_pred cccccCCCCCCCEEeCCCCccccccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHH
Confidence 1233333211 0 1136778888865444555666643 2344465433 8999999
Q ss_pred HHHhCCCCCceEEEEecCcccccccccccCCCCCCcccccEEEEcCCCCCCCCC-CceeEEeehhhhhhhcCCc---ccc
Q 011842 260 LEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKPIGSVSVSGHKFVGCPM-PCGVQITRMEHINVLSSNV---EYL 335 (476)
Q Consensus 260 a~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~~Dsi~~s~hK~l~~p~-~~G~l~~~~~~~~~l~~~~---~yl 335 (476)
|++||+ ++++|+++.|+-....-......+ -..|.++++ |.++.++ ++|.+++++++.+.+.... .++
T Consensus 267 c~~~gi-----llI~DEV~TGfGRtG~~~a~e~~g-v~PDiv~~g--Kgl~gG~~Plaav~~~~ei~~~~~~~~~~~~~~ 338 (472)
T PRK08742 267 CDAHGA-----FLIADEIATGFGRTGTLFACEQAG-VMPDLLCLS--KGLTGGFLPLSAVLATQQLYDAFLDDSRERAFL 338 (472)
T ss_pred HHHcCC-----EEEEechhhCCCCCccchHHHhcC-CCCCEEEEc--ccccCCCCCcceeeccHHHHHHhhccCccCccC
Confidence 999999 999999987652211000000111 127998885 9888785 8999999998876553210 111
Q ss_pred CCCCCcccCCCCChhHHHHHHH---HHHhChhcHHHHHHHHHHHHHHHHHHHHh---cCCe-EeecCCe-eEEEEecCC-
Q 011842 336 ASRDATIMGSRNGHAPIFLWYT---LNRKGYKGFQKEVQKCLRNAHYLKDRLLD---AGIS-AMLNELS-STVVFERPQ- 406 (476)
Q Consensus 336 ~~~~~~~~~sr~~~~~l~~~~~---l~~~g~~g~~~~~~~~~~~a~~l~~~L~~---~g~~-~~~~~~~-~iv~f~~~~- 406 (476)
. ..|+.+. ++...++ ++.+..++ .+++..++.++|.+.++. .+.. .+...+. .-+-|..+.
T Consensus 339 h--~~T~~gn-----pl~~Aaa~a~L~~i~~~~---l~~~~~~~g~~l~~~~~~~~~~~~i~dvRG~Gl~~giel~~~~~ 408 (472)
T PRK08742 339 H--SHSYTGN-----PLACAAALATLDIFADDD---VIARNQPTAARMTQLAAQIGEHPHVADVRQAGMVVAFELTRGGN 408 (472)
T ss_pred c--CCCCCcc-----HHHHHHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHHHHhcCCCeeeEeccceEEEEEeccCcc
Confidence 0 1122222 3443333 44433333 445555566666655544 3321 1111221 112222110
Q ss_pred -------cHH----H-----hhceeecccCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 011842 407 -------DEE----F-----VRRWQLACQGNIAHVVVMPNVTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 407 -------~~~----~-----~~~~~l~~~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~ 450 (476)
+.. + .+++.+...++.+|+.....+|++|||.+++.|+++++++
T Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~Gll~~~~g~vi~~~PpL~it~~ei~~~~~~l~~~l~~~ 468 (472)
T PRK08742 409 KRTPFPPAARVGLHAYRAALARGVVLRPLGDVLYWMPPYCVDEAQLALLADTTRHAIDEA 468 (472)
T ss_pred ccccCCchhHHHHHHHHHHHHCCeEEEecCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 001 1 1233333346889988888899999999999999998764
No 358
>PRK06149 hypothetical protein; Provisional
Probab=99.35 E-value=8.1e-10 Score=125.62 Aligned_cols=291 Identities=17% Similarity=0.072 Sum_probs=164.1
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCc-EEEecCCCchHHHHHHHHcC------------
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDG-ILYASRESHYSVFKAARMYR------------ 205 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~-~Vl~s~~~H~S~~~~~~~~G------------ 205 (476)
+...++.+.+++++.-.. ...+|+++||+||..|++.+|....+. +|......|.....+..+.+
T Consensus 624 ~~~~elae~L~~~~p~~~--~~v~f~~SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~ 701 (972)
T PRK06149 624 AAVAEFSERLAALAPDGL--DTVFLVNSGSEANDLAIRLAWAASGRRDVVSVLEAYHGWTVATDAVSTSIADNPQALETR 701 (972)
T ss_pred HHHHHHHHHHHHhCCCCc--CEEEEeCCchHHHHHHHHHHHHhcCCCeEEEEeCCCCCcChhHhhhcCCccccccccCCC
Confidence 455677777888773211 248999999999999999998753444 44454445532211111111
Q ss_pred C-eEEEEeCCCC--C---ccC-----HHHHHHHHH---cCCCCcEEEEEeeCCCccccccC----HHHHHHHHHHhCCCC
Q 011842 206 M-ECVKVDCLIS--G---EID-----CADFKAKLL---QNKDKPAIINVNIGTTVKGAVDD----LDLVIQTLEESGFTQ 267 (476)
Q Consensus 206 ~-~v~~v~~~~~--g---~~D-----~~~Le~~l~---~~~~~p~~vv~t~gtt~tG~id~----l~~I~~ia~~~g~~~ 267 (476)
. .+..++.... + ..| .+++++.++ +..+.+..|++.-..+..|.+.| +++|.++|++||+
T Consensus 702 ~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~-- 779 (972)
T PRK06149 702 PDWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGG-- 779 (972)
T ss_pred CCCeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCC--
Confidence 0 1233332211 1 112 345555553 23345566766655677788888 9999999999999
Q ss_pred CceEEEEecCcccccccccc--cCCCCCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCC
Q 011842 268 DRFYIHCDGALFGLMMPFVK--KAPKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGS 345 (476)
Q Consensus 268 ~~~~lhvD~a~~g~~~~~~~--~~~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~s 345 (476)
++++|+++.|+-..+.. ....+.. ..|++++ .|.++.+.++|++++++++.+.+... .++++ |..+
T Consensus 780 ---llI~DEV~tGfGRtG~~~~a~e~~gv--~PDivt~--gK~lg~G~Pl~av~~~~~i~~~~~~~-~~~~s---T~~g- 847 (972)
T PRK06149 780 ---VCIADEVQVGYGRLGHYFWGFEQQGV--VPDIITM--AKGMGNGHPLGAVITRREIAEALEAE-GYFFS---STGG- 847 (972)
T ss_pred ---EEEEEeehhcCCccCccchhhhhcCC--CCCEEEe--cccccCCeeeEEEEEcHHHHhhhccC-CcccC---CCCC-
Confidence 99999999543111100 0000111 2788866 49998888999999999887666432 12211 1211
Q ss_pred CCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhc----CCeEeecCCeeEEE--Eec------CCcH---HH
Q 011842 346 RNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDA----GISAMLNELSSTVV--FER------PQDE---EF 410 (476)
Q Consensus 346 r~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----g~~~~~~~~~~iv~--f~~------~~~~---~~ 410 (476)
.++...++++.+..-.-++..++..++.++|+++|++. ++...+.....++. |.. +... .+
T Consensus 848 ----nP~~~aaala~L~~i~~e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~Gl~~gvel~~~~~~~~~~~~~~~~i 923 (972)
T PRK06149 848 ----SPVSCRIGMAVLDVLREEKLQENARRVGDHLKARLEALADRHPLIGAVHGMGLYLGVELVRDRQTLEPATEETAAI 923 (972)
T ss_pred ----CHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeecceEEEEEEecCcccCCCChHHHHHH
Confidence 23444444443321111245666677778888888764 32211111111222 211 1111 11
Q ss_pred -----hhceeecccC---CEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Q 011842 411 -----VRRWQLACQG---NIAHVVVMPNVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 411 -----~~~~~l~~~~---~~lRv~~~~~~T~edid~~~~~l~~~~~~ 449 (476)
.+++.+...+ +.+|+.....+|+++||.++++|+++.++
T Consensus 924 ~~~l~~~Gvl~~~~g~~~~vl~~~Ppl~it~~~id~~~~~l~~~l~~ 970 (972)
T PRK06149 924 CDRLLELGVIMQPTGDHLNILKIKPPLCLDRESADFFVDMLDRVLTE 970 (972)
T ss_pred HHHHHhCCeEEeecCCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHh
Confidence 1233333222 67887777779999999999999988753
No 359
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.33 E-value=4.8e-10 Score=113.61 Aligned_cols=292 Identities=13% Similarity=0.078 Sum_probs=168.4
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCC----Cc---hH-HHHHHHHcCCe
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRE----SH---YS-VFKAARMYRME 207 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~----~H---~S-~~~~~~~~G~~ 207 (476)
....||+. +++++|.+. ++.|..|+.++.+...+... .|++.+.+... .| +- ....+.+.|+.
T Consensus 75 Sv~~Lee~----vael~G~E~----alpthqGRgaE~Il~~~~~~-~~g~e~g~~~~~~~v~hn~~fett~g~a~l~G~~ 145 (467)
T TIGR02617 75 SYYALAES----VKNIFGYQY----TIPTHQGRGAEQIYIPVLIK-KREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCT 145 (467)
T ss_pred hHHHHHHH----HHHHhCCce----EEECCCCchHHHHHHHhhcc-cccccccccccccccceEEEEecchHHHHHcCce
Confidence 34556655 667788875 78999999999988777654 25666654443 22 22 23356677888
Q ss_pred EEEEeC----------CCCCccCHHHHHHHHHcCC-CCcEEEEEeeCCCc-cccc---cCHHHHHHHHHHhCCCCCceEE
Q 011842 208 CVKVDC----------LISGEIDCADFKAKLLQNK-DKPAIINVNIGTTV-KGAV---DDLDLVIQTLEESGFTQDRFYI 272 (476)
Q Consensus 208 v~~v~~----------~~~g~~D~~~Le~~l~~~~-~~p~~vv~t~gtt~-tG~i---d~l~~I~~ia~~~g~~~~~~~l 272 (476)
++.++. ..+|.+|+++|+++|.+.. ..+.++..+..+|. -|.+ +.++++.++|++||+ .+
T Consensus 146 ~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~~i~~v~~tlt~N~~GGqpvslenlr~V~~la~~~GI-----pl 220 (467)
T TIGR02617 146 ARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITCNSAGGQPVSLANLKAVYEIAKKYDI-----PV 220 (467)
T ss_pred eecccchhhcccccCCCCCCCcCHHHHHHHHhhcCCCCceeeeeeEEEecCCCEEeCHHHHHHHHHHHHHcCC-----cE
Confidence 776532 2358999999999998642 11222222222222 2433 678999999999999 99
Q ss_pred EEecCccc---ccccc----cccCCCCCC----cccccEEEEcCCCCCCCCCCceeEEeehh----hhhhhc-CCccccC
Q 011842 273 HCDGALFG---LMMPF----VKKAPKVSF----KKPIGSVSVSGHKFVGCPMPCGVQITRME----HINVLS-SNVEYLA 336 (476)
Q Consensus 273 hvD~a~~g---~~~~~----~~~~~~~~~----~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~----~~~~l~-~~~~yl~ 336 (476)
|.|||--. .++.. ....+..+. ...+|++++|++|-+++|.| |+++.+++ +.+... ....|=.
T Consensus 221 hLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~slsKglgApvG-g~Lag~d~~~~~l~~~~~~~~i~~EG 299 (467)
T TIGR02617 221 VMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYADMLAMSAKKDAMVPMG-GLLCFKDDSFFDVYTECRTLCVVQEG 299 (467)
T ss_pred EEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEEEEcCCCCCCccc-ceEEecchhHHHHHHHHHhhcccccC
Confidence 99998522 11110 011111111 14589999999999999886 45555554 222221 1111210
Q ss_pred CCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEe-------cCCc--
Q 011842 337 SRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFE-------RPQD-- 407 (476)
Q Consensus 337 ~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~-------~~~~-- 407 (476)
. .| .|+.++...-++...|... --.+.+++-....+||.++|.+.|+.++. .+..-|++. +|..
T Consensus 300 f--~t-YGGlagrd~ea~a~Gl~e~---~~~~yl~~ri~qv~yl~~~L~~~Gvpi~~-~Gghav~iDa~~~lphip~~~f 372 (467)
T TIGR02617 300 F--PT-YGGLEGGAMERLAVGLYDG---MNLDWLAYRINQVQYLVNGLEEIGVVCQQ-AGGHAAFVDAGKLLPHIPADQF 372 (467)
T ss_pred C--cC-cCchhHHHHHHHHhhhhhc---ccHHHHHHHHHHHHHHHHHHHhCCCcEEe-cCccEEEEehhhhCCCCChhhC
Confidence 0 11 1222222212222222221 22456666777889999999999987766 544444432 2211
Q ss_pred --HHHhhcee------------e-----cc-------cCCEEEEEEcCC-CCHHHHHHHHHHHHHHHHH
Q 011842 408 --EEFVRRWQ------------L-----AC-------QGNIAHVVVMPN-VTIDKLDDFLNELIENRST 449 (476)
Q Consensus 408 --~~~~~~~~------------l-----~~-------~~~~lRv~~~~~-~T~edid~~~~~l~~~~~~ 449 (476)
..+...+. + +. .-..+|+.+... .|.+++|.+++++..+.+.
T Consensus 373 pa~al~~~ly~~~GiR~~e~G~~~~~rd~~~~~~~~~~~el~RlaipRrvyt~~h~d~v~~~~~~~~~~ 441 (467)
T TIGR02617 373 PAHALACELYKVAGIRAVEIGSLLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKEN 441 (467)
T ss_pred cHHHHHHHHHHHcCcceEeecceecccCCCCCccCCCccceeeeccccccccHhHHHHHHHHHHHHHhh
Confidence 11111111 0 11 124678876544 4999999999999888654
No 360
>PRK07483 hypothetical protein; Provisional
Probab=99.31 E-value=5.2e-09 Score=109.16 Aligned_cols=296 Identities=14% Similarity=0.109 Sum_probs=163.7
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhC-----C-CcEEEecCC-CchHHHHHHHHcCC-----
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVF-----P-DGILYASRE-SHYSVFKAARMYRM----- 206 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~-----p-~~~Vl~s~~-~H~S~~~~~~~~G~----- 206 (476)
+...++.+.+.++..-.. ...+|+++||+|+-.|+..+|... + +..|+.-+. -|....-+..+.|-
T Consensus 73 ~~~~~lae~L~~~~p~~~--~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~ 150 (443)
T PRK07483 73 EPAEALADRLVAAAPAGL--EHVYFVSGGSEAVEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRRE 150 (443)
T ss_pred HHHHHHHHHHHHhCCCCC--CEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCccccc
Confidence 455567777888764221 248999999999999999998751 2 345555444 44332222222211
Q ss_pred -------eEEEEeCCCCCc-c------------CHHHHHHHHHcC-CCCcEEEEEeeCCC-ccccccC----HHHHHHHH
Q 011842 207 -------ECVKVDCLISGE-I------------DCADFKAKLLQN-KDKPAIINVNIGTT-VKGAVDD----LDLVIQTL 260 (476)
Q Consensus 207 -------~v~~v~~~~~g~-~------------D~~~Le~~l~~~-~~~p~~vv~t~gtt-~tG~id~----l~~I~~ia 260 (476)
.+..++...... . .++.|++.+... .+....|++.-... .-|.+.| +++|.++|
T Consensus 151 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc 230 (443)
T PRK07483 151 PFAPLLIEAHHVSPCYAYREQRAGESDEAYGQRLADELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVC 230 (443)
T ss_pred ccCCCCCCCEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHH
Confidence 123333211011 0 135677766532 23344565543332 2355544 89999999
Q ss_pred HHhCCCCCceEEEEecCcccccccccccC-CCCCCcccccEEEEcCCCCCCCCC-CceeEEeehhhhhhhcCCccccCCC
Q 011842 261 EESGFTQDRFYIHCDGALFGLMMPFVKKA-PKVSFKKPIGSVSVSGHKFVGCPM-PCGVQITRMEHINVLSSNVEYLASR 338 (476)
Q Consensus 261 ~~~g~~~~~~~lhvD~a~~g~~~~~~~~~-~~~~~~~~~Dsi~~s~hK~l~~p~-~~G~l~~~~~~~~~l~~~~~yl~~~ 338 (476)
++||+ ++++|+++.|+--...-.. ..+. -..|.++++ |.++.++ ++|.+++++++.+.+.....++..
T Consensus 231 ~~~gi-----llI~DEV~tGfGRtG~~~a~~~~g--v~PDiv~~g--K~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~h- 300 (443)
T PRK07483 231 DRYGV-----LLILDEVMCGMGRTGTLFACEEDG--VAPDLVTIA--KGLGAGYQPIGAVLASDRIYDAIADGSGFFQH- 300 (443)
T ss_pred HHhCC-----EEEEecceeCcccCcHHHHHhhcC--CCCCeeeeh--hhhccCccccEEEEEcHHHHHHHhcCCCcccc-
Confidence 99999 9999999876522110000 0011 126888875 9888886 899999999887665422111110
Q ss_pred CCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhc----CCe-EeecCCe-eEEEEecCC------
Q 011842 339 DATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDA----GIS-AMLNELS-STVVFERPQ------ 406 (476)
Q Consensus 339 ~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----g~~-~~~~~~~-~iv~f~~~~------ 406 (476)
..|+.+. +++..++++.+..-.-.+..++..++.++|++.|++. +.. .+...+. .-+-|..+.
T Consensus 301 ~~T~~gn-----pl~~aaa~a~l~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vRG~Glm~gie~~~~~~~~~~~ 375 (443)
T PRK07483 301 GHTYLGH-----ATACAAALAVQRVIAEDGLLANVRARGEQLRARLRERLGQHPHVGDIRGRGLFVGVELVADRATKAPF 375 (443)
T ss_pred CCCCCCC-----HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhcCCCeeeEeecccEEEEEEeecccccCCC
Confidence 1122222 3444444443321111345667777788888888652 321 1111221 111121110
Q ss_pred --c----HHH-----hhceeec-cc-------CCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 011842 407 --D----EEF-----VRRWQLA-CQ-------GNIAHVVVMPNVTIDKLDDFLNELIENRSTWY 451 (476)
Q Consensus 407 --~----~~~-----~~~~~l~-~~-------~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~ 451 (476)
+ ..+ .+++.+. .. ++.+|+.....+|++|||.++++|+++++++.
T Consensus 376 ~~~~~~~~~~~~~~~~~Gll~~~~~~~~~~~~~~~l~~~PpL~it~~eid~~~~~l~~~l~~~~ 439 (443)
T PRK07483 376 DPALKLHARIKREAMARGLMVYPMGGTIDGVRGDHVLLAPPFIITAAQIDEIVERLGDAIDAAL 439 (443)
T ss_pred CchhhHHHHHHHHHHHCCcEEEecCccccCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 0 111 1233332 11 36889888888899999999999999987654
No 361
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.30 E-value=2.1e-09 Score=118.08 Aligned_cols=332 Identities=12% Similarity=0.072 Sum_probs=195.3
Q ss_pred CCcHHHHHHHHHHHHhcc--cccccCCCCcCCcchHHH-HHHHHHhhCCCCCCcccCccc----hhhHHHHHHHHHHHHH
Q 011842 78 EAYMAGVLARYRKTLMER--TKHHLGYPYNLDFDYGAL-AQLQHFSINNLGDPFIESNYG----VHSRQFEVGVLDWFAR 150 (476)
Q Consensus 78 ~~~~~~il~~~~~~~~~~--~~~~~g~p~~~~~~~~~l-~~~l~~~~n~~g~~~~~~~~~----~~~~~le~~~~~~la~ 150 (476)
+.+-.++++.+++....+ ...++|--.+..+.++.+ ..++. +.+.-..+.||. .+.-+.--+...++++
T Consensus 60 ~~sE~e~~~~~~~~a~kN~~~~~fiG~G~y~~~~P~vi~~~i~~----~~~~yTaYTPYQpEisQG~Lqal~e~Qtmi~~ 135 (954)
T PRK12566 60 ALDEQAALARLRGYAEQNQVWTSLIGMGYHGTVTPTVILRNVLE----NPGWYTAYTPYQPEIAQGRLEALLNFQQMTID 135 (954)
T ss_pred CCCHHHHHHHHHHHHhcCCCccccccccccCCcCcHHHHHHHHh----CchhhhcCCCCCchhhhHHHHHHHHHHHHHHH
Confidence 445678888888876665 334667444444444555 33332 322111122332 2333444456789999
Q ss_pred HcCCCCCcccEEEcCCchhHHHHHHHHHHhhC--CCcEEEecCCCchHHHHHH----HHcCCeEEEEeCCCCCccCHHHH
Q 011842 151 LWELENNEYWGYITNCGTEGNLHGILVGREVF--PDGILYASRESHYSVFKAA----RMYRMECVKVDCLISGEIDCADF 224 (476)
Q Consensus 151 l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~--p~~~Vl~s~~~H~S~~~~~----~~~G~~v~~v~~~~~g~~D~~~L 224 (476)
|.|++..+ .-.-.++|- .-.|+.+++... +...|++++..|+...... +..|++++. ++|
T Consensus 136 LtGm~vaN--ASl~D~atA-~aEA~~ma~~~~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~-----------~~~ 201 (954)
T PRK12566 136 LTGLDLAN--ASLLDEATA-AAEAMALAKRVAKSKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVV-----------DAV 201 (954)
T ss_pred HhCchhhh--hhhccchhH-HHHHHHHHHHHhhcCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEE-----------cch
Confidence 99998543 223334332 222333333211 2568999999998866544 344667664 344
Q ss_pred HHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCc--ccccccccccCCCCCCcccccEEE
Q 011842 225 KAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGAL--FGLMMPFVKKAPKVSFKKPIGSVS 302 (476)
Q Consensus 225 e~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~--~g~~~~~~~~~~~~~~~~~~Dsi~ 302 (476)
++.+.++ .+.|++..| +..|.+.|+++|++++++.|. + .++++- +...+ + -.+.-++|+.+
T Consensus 202 ~~~~~~~---~~~v~vq~P-~~~G~i~d~~~i~~~~h~~ga-----l-~~~~~d~laL~ll---~----~Pge~GADI~v 264 (954)
T PRK12566 202 DNLAAHA---VFGALLQYP-DTHGEIRDLRPLIDQLHGQQA-----L-ACVAADLLSLLVL---T----PPGELGADVVL 264 (954)
T ss_pred hhcCCCC---EEEEEEECC-CCceEEccHHHHHHHHHHcCC-----E-EEEEeCHHHHhCC---C----ChhhcCCcEEe
Confidence 4444333 346667665 467999999999999999998 5 445553 11111 1 12223489986
Q ss_pred EcCCCCC----CCCCCceeEEeehhhhhhhcCC-----------ccc----------cCCCC-CcccCCCCChhHHHHHH
Q 011842 303 VSGHKFV----GCPMPCGVQITRMEHINVLSSN-----------VEY----------LASRD-ATIMGSRNGHAPIFLWY 356 (476)
Q Consensus 303 ~s~hK~l----~~p~~~G~l~~~~~~~~~l~~~-----------~~y----------l~~~~-~~~~~sr~~~~~l~~~~ 356 (476)
.+++-++ ++++..|++.+++++.+.++.. ..| +.... .+-.||..+..++....
T Consensus 265 G~~Q~fGvp~~~GGP~ag~~a~~~~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKAtSNICT~qaL~A~~a~~ 344 (954)
T PRK12566 265 GSTQRFGVPMGYGGPHAAYFACRDDYKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKANSNICTAQVLLANIAGF 344 (954)
T ss_pred eCCCcCCCCCCCCCCCeeeeeehHHHHhhCCCCccceeecCCCCeeeehhhhHHHHHhhhccccchhhHHHHHHHHHHHH
Confidence 6554321 2335588999999887665321 011 11100 11234433333333334
Q ss_pred HHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecC-CcHHH-----hhceeecc-cCCEEEEEEcC
Q 011842 357 TLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERP-QDEEF-----VRRWQLAC-QGNIAHVVVMP 429 (476)
Q Consensus 357 ~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~-~~~~~-----~~~~~l~~-~~~~lRv~~~~ 429 (476)
.+.++|.+|++++.++.+.++.||.+.|++.|+.....+....+.+... ...++ .+++++-. ..+.+.+++..
T Consensus 345 Y~~~~Gp~Gl~~ia~~~~~~a~~l~~~l~~~g~~~~~~~fF~~~~v~~~~~~~~~~~~a~~~~~n~r~~~~~~~~~s~de 424 (954)
T PRK12566 345 YAVYHGPEGLKRIAQRVHRLTAILAAGLEAKGIKRLNRHFFDTLTLEVGGAQAAIIESAEAARINLRILGRGRLGVSLDE 424 (954)
T ss_pred HHHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCccceEEEEccCCHHHHHHHHHHCCCeeEEeCCCeEEEEeCC
Confidence 4567799999999999999999999999998876544433445555543 22222 23344322 34678899999
Q ss_pred CCCHHHHHHHHHHHH
Q 011842 430 NVTIDKLDDFLNELI 444 (476)
Q Consensus 430 ~~T~edid~~~~~l~ 444 (476)
.+|.+||+.+++++.
T Consensus 425 ~~~~~~~~~~~~~f~ 439 (954)
T PRK12566 425 TCDEATVARLFDIFL 439 (954)
T ss_pred CCCHHHHHHHHHHhc
Confidence 999999999999984
No 362
>PRK06148 hypothetical protein; Provisional
Probab=99.30 E-value=2.3e-09 Score=122.08 Aligned_cols=293 Identities=14% Similarity=0.080 Sum_probs=167.4
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCC-chHHHHHHHHcC----------C-
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRES-HYSVFKAARMYR----------M- 206 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~-H~S~~~~~~~~G----------~- 206 (476)
+.+.++.+.+++++.-+. ...+|+++||+||-.|++.||....+..|++-+.+ |.....+..+.+ .
T Consensus 663 ~~~~~lAe~L~~~~p~~~--~~v~f~nSGsEA~e~AlklAr~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~ 740 (1013)
T PRK06148 663 DAIVAYAERLTATLPDGL--TVAFFVNSGSEANSLALRLARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRP 740 (1013)
T ss_pred HHHHHHHHHHHHhCCCCc--CEEEEeCCcHHHHHHHHHHHHHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCC
Confidence 556677777877764321 24889999999999999999976444455544444 432221111111 0
Q ss_pred -eEEEEeCCCC--Ccc---C-------HHHHHHHHH---cCCCCcEEEEEeeCCCccccccC----HHHHHHHHHHhCCC
Q 011842 207 -ECVKVDCLIS--GEI---D-------CADFKAKLL---QNKDKPAIINVNIGTTVKGAVDD----LDLVIQTLEESGFT 266 (476)
Q Consensus 207 -~v~~v~~~~~--g~~---D-------~~~Le~~l~---~~~~~p~~vv~t~gtt~tG~id~----l~~I~~ia~~~g~~ 266 (476)
.+..++.... +.. | .+.+++.+. ...+.+..|++......-|.+.| +++|.++|++||+
T Consensus 741 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~- 819 (1013)
T PRK06148 741 DHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGG- 819 (1013)
T ss_pred CCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCC-
Confidence 1222221100 001 1 245666664 22344566766655666677766 9999999999999
Q ss_pred CCceEEEEecCcccccccccc--cCCCCCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccC
Q 011842 267 QDRFYIHCDGALFGLMMPFVK--KAPKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMG 344 (476)
Q Consensus 267 ~~~~~lhvD~a~~g~~~~~~~--~~~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~ 344 (476)
++++|+++.|+---+.. ....+.+ ..|++++. |.++.++++|.++++++..+.+.....|. .|+.+
T Consensus 820 ----llI~DEVqtGfGRtG~~~~a~e~~gv--~PDivt~g--K~lggG~Plgav~~~~ei~~~~~~g~~~~----~Tf~g 887 (1013)
T PRK06148 820 ----VCIADEVQVGFGRVGSHWWAFETQGV--VPDIVTMG--KPIGNGHPMGAVVTTREIADSFDNGMEYF----NTFGG 887 (1013)
T ss_pred ----EEEEEecccCCCCCCCcchhhhhcCC--Ccceeeec--ccccCCcceEEEEEcHHHHhhccCCCccc----cCCCC
Confidence 99999999664211100 0000111 26888774 99988899999999988876664321121 22332
Q ss_pred CCCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhc----CCeE-eecCCeeE-EEEecC-----CcHH----
Q 011842 345 SRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDA----GISA-MLNELSST-VVFERP-----QDEE---- 409 (476)
Q Consensus 345 sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----g~~~-~~~~~~~i-v~f~~~-----~~~~---- 409 (476)
. +++..++++.+..-.-++..++..++.++|+++|++. +... +...+..+ +-|..+ .+..
T Consensus 888 n-----pla~aaa~a~L~~i~~e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Gl~~gvel~~~~~~~~~~~~~~~~ 962 (1013)
T PRK06148 888 N-----PVSCAIGLAVLDIIEDEDLQRNALEIGNYLLAGLRELQDRFDIIGDVRGMGLFLGIELVTDRKTKAPATAIARY 962 (1013)
T ss_pred C-----HHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCceEEeeeceEEEEEecCCccccCccHHHHHH
Confidence 2 3333333333321111245667777888888888764 3211 11122111 122211 1111
Q ss_pred H-----hhceeecc---cCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 011842 410 F-----VRRWQLAC---QGNIAHVVVMPNVTIDKLDDFLNELIENRSTWY 451 (476)
Q Consensus 410 ~-----~~~~~l~~---~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~ 451 (476)
+ .+++.+.. .++.+|+.....+|++|||.++++|+++.++..
T Consensus 963 i~~~~~~~Gvl~~~~g~~~~vlr~~Ppl~it~~~id~~l~~l~~~l~~~~ 1012 (1013)
T PRK06148 963 VKNGARERGILIGTEGPHDNVLKIRPPLIFSRADADHLLEVLDDVLAAAL 1012 (1013)
T ss_pred HHHHHHhCCeEEeccCCCCCEEEEeCCccCCHHHHHHHHHHHHHHHHHHh
Confidence 1 12333432 247899998888999999999999999887643
No 363
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.29 E-value=4.5e-09 Score=108.99 Aligned_cols=289 Identities=12% Similarity=-0.002 Sum_probs=158.3
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhC------CCcEEEecCC-CchHHHHHHHHcCC-----
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVF------PDGILYASRE-SHYSVFKAARMYRM----- 206 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~------p~~~Vl~s~~-~H~S~~~~~~~~G~----- 206 (476)
+...++.+.+.++.+.+. ...+|+++||+|+-.|+..+|... .+..|+.-+. -|....-+..+.+-
T Consensus 83 ~~~~~lae~L~~~~p~~~--~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~ 160 (422)
T PRK05630 83 EPAIKLTRKLLNLTDNGL--DHVFYSDSGSVSVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMH 160 (422)
T ss_pred HHHHHHHHHHHhhCCCCc--CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCccccc
Confidence 445567777777764222 248999999999999999998742 1344554444 44332222222221
Q ss_pred --------eEEEEeCCCCCccC-------HHHHHHHHHcCCCCcEEEEEeeC-CCccccc----cCHHHHHHHHHHhCCC
Q 011842 207 --------ECVKVDCLISGEID-------CADFKAKLLQNKDKPAIINVNIG-TTVKGAV----DDLDLVIQTLEESGFT 266 (476)
Q Consensus 207 --------~v~~v~~~~~g~~D-------~~~Le~~l~~~~~~p~~vv~t~g-tt~tG~i----d~l~~I~~ia~~~g~~ 266 (476)
....+|.......+ .+.+++.+.+ ....|++.-. ....|.+ +.+++|.++|++||+
T Consensus 161 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~- 236 (422)
T PRK05630 161 SLWKGTLPEQIFAPAPPVRGSSPQEISEYLRSLELLIDE---TVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDI- 236 (422)
T ss_pred ccccccCCCCeEcCCCcccCCChHHHHHHHHHHHHHHhh---ceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCC-
Confidence 12333332111112 2344444442 2345555431 3334443 458999999999999
Q ss_pred CCceEEEEecCcccccccccccC--CCCCCcccccEEEEcCCCCCCCCC-CceeEEeehhhhhhhcCC---ccccCCCCC
Q 011842 267 QDRFYIHCDGALFGLMMPFVKKA--PKVSFKKPIGSVSVSGHKFVGCPM-PCGVQITRMEHINVLSSN---VEYLASRDA 340 (476)
Q Consensus 267 ~~~~~lhvD~a~~g~~~~~~~~~--~~~~~~~~~Dsi~~s~hK~l~~p~-~~G~l~~~~~~~~~l~~~---~~yl~~~~~ 340 (476)
++++|+++.|+-. ..... ..+. -..|++++ .|.++.++ ++|+++++++..+.+... ..+. ...
T Consensus 237 ----llI~DEv~tG~Gr-tG~~~a~~~~g--v~PDi~t~--gK~l~gG~~p~~av~~~~~i~~~~~~~~~~~~~~--h~~ 305 (422)
T PRK05630 237 ----LLIADEIATGFGR-TGELFATLAAG--VTPDIMCV--GKALTGGFMSFAATLCTDKVAQLISTPNGGGALM--HGP 305 (422)
T ss_pred ----EEEEecceeCCCc-CchhhHHHhcC--CCCCeeee--echhhcCccccceeeccHHHHHHHhccCCCCccc--cCC
Confidence 9999999865421 11110 0011 12688865 59987664 789999998876665321 0111 012
Q ss_pred cccCCCCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCC-eEee--cCCeeEEEEec--CC-cHHH----
Q 011842 341 TIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGI-SAML--NELSSTVVFER--PQ-DEEF---- 410 (476)
Q Consensus 341 ~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~-~~~~--~~~~~iv~f~~--~~-~~~~---- 410 (476)
|+.+.. .......++++.+..+ +..++..++.++|++.|++..- ..+. .-...++.+.. +. ...+
T Consensus 306 T~~g~P--la~aaa~aaL~~l~~~---~~~~~~~~~g~~l~~~L~~l~~~~~v~~vRg~Gl~~~ie~~~~~~~~~~~~~~ 380 (422)
T PRK05630 306 TFMANP--LACAVAHASLEIIETG---MWRKQVKRIEAELIAGLSPLAHLPGVADVRVLGAIGVVEMEQPVDMEEATQAA 380 (422)
T ss_pred CCcCCH--HHHHHHHHHHHHHHhC---cHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccccEEEEEECCcccHHHHHHHH
Confidence 222221 1122233344444332 3456777788888887765311 1111 11123333332 21 1122
Q ss_pred -hhceeecccCCEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Q 011842 411 -VRRWQLACQGNIAHVVVMPNVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 411 -~~~~~l~~~~~~lRv~~~~~~T~edid~~~~~l~~~~~~ 449 (476)
.+++.+...++.+|+.....+|++|||.+++.|+++.+.
T Consensus 381 ~~~Gl~~~~~g~~l~~~PpL~it~~~i~~~~~~l~~al~~ 420 (422)
T PRK05630 381 VDHGVWLRPFGRLVYVMPPYITTSEQIAQICAALAAAVKA 420 (422)
T ss_pred HHCCeEEEecCCEEEEECCccCCHHHHHHHHHHHHHHHhc
Confidence 234444444678888888889999999999999988753
No 364
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.28 E-value=2.5e-09 Score=101.14 Aligned_cols=343 Identities=13% Similarity=0.051 Sum_probs=187.9
Q ss_pred HHHHHHHHHHHHhcccccccCCCCcCCcc-------hHHHHHHHHHh-hCCCCCCcccCccchhhHHHHHHHHHHHHHHc
Q 011842 81 MAGVLARYRKTLMERTKHHLGYPYNLDFD-------YGALAQLQHFS-INNLGDPFIESNYGVHSRQFEVGVLDWFARLW 152 (476)
Q Consensus 81 ~~~il~~~~~~~~~~~~~~~g~p~~~~~~-------~~~l~~~l~~~-~n~~g~~~~~~~~~~~~~~le~~~~~~la~l~ 152 (476)
...+++++.+.+...-...+| -.|+... ....++++... .......+.. +.+...+-+++...+.+-+
T Consensus 16 i~~lMdDl~d~Lrt~g~imLg-gGNPa~iPem~~~f~~~~aemla~~~~~e~~cnY~~---pQG~~~li~ala~~l~~~y 91 (417)
T COG3977 16 ITQLMDDLNDGLRTPGAIMLG-GGNPARIPEMDDYFQDLLAEMLASGKATEALCNYDG---PQGKAVLIDALAKMLRREY 91 (417)
T ss_pred HHHHHHHHHhhccCCCceeeC-CCCcccChhHHHHHHHHHHHHHhcchHHHHHhcCCC---CcchhHHHHHHHHHHHHHh
Confidence 456666666666544444555 2233222 12333443322 1111112222 2256789999999999999
Q ss_pred CCCCCcccEEEcCCchhHHHHHHHHHHhhCCC----cEEEecCCCchHHHHHHHHcCCeEEEEe----CCC----CCccC
Q 011842 153 ELENNEYWGYITNCGTEGNLHGILVGREVFPD----GILYASRESHYSVFKAARMYRMECVKVD----CLI----SGEID 220 (476)
Q Consensus 153 g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~----~~Vl~s~~~H~S~~~~~~~~G~~v~~v~----~~~----~g~~D 220 (476)
|+.-....+.+|+|+..+.++.....-.++++ .+++--.++|..+..++---. -.+.+. ..+ ..++|
T Consensus 92 gwnit~~NIalTnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~~d-~fVs~kP~iel~~~g~FKY~vD 170 (417)
T COG3977 92 GWNITAQNIALTNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGLEED-LFVSAKPNIELLPAGQFKYHVD 170 (417)
T ss_pred CCCCccceeeecCCccchHHHHHHHhcCccCCCcceeEeeccChhhccccccccCcc-ceeeccCCcccccccceeeccC
Confidence 99866667999999999988776654332222 233333444433322210000 011111 111 24678
Q ss_pred HHHHHHHHHcCCCCcEEEEEeeCCCccccc---cCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccC-CCCCCcc
Q 011842 221 CADFKAKLLQNKDKPAIINVNIGTTVKGAV---DDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKA-PKVSFKK 296 (476)
Q Consensus 221 ~~~Le~~l~~~~~~p~~vv~t~gtt~tG~i---d~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~-~~~~~~~ 296 (476)
.++|+ +.+.+. +|+++-+|++||.+ +.+.+|..+|++||+ .+++|.|||..+ |..... ...-+-+
T Consensus 171 F~~l~--i~e~~g---~ic~SRPtNPTGNVlTdeE~~kldalA~~~gi-----PliIDnAYg~PF-P~iifsd~~~~w~~ 239 (417)
T COG3977 171 FEHLH--IGESTG---AICVSRPTNPTGNVLTDEELAKLDALARQHGI-----PLIIDNAYGVPF-PGIIFSDATPLWNE 239 (417)
T ss_pred HHHcc--cccccc---eEEecCCCCCCCCcccHHHHHHHHHHhhhcCC-----cEEEecccCCCC-CceecccccccCCC
Confidence 88775 334554 88999999999998 468889999999999 999999997532 211110 0011111
Q ss_pred cccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHHH----
Q 011842 297 PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQK---- 372 (476)
Q Consensus 297 ~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~---- 372 (476)
-..++.|..|....+.+||+++.++++++++...... -++.-+|-+.+ ++. ..+....+.++.++
T Consensus 240 -NiilC~SLSK~GLPG~R~GIiIane~viqaitnmn~i-----isLap~~~G~A-ia~----~mie~gdl~rlseqVIrP 308 (417)
T COG3977 240 -NIILCMSLSKLGLPGSRCGIIIANEKVIQAITNMNGI-----ISLAPGRMGPA-IAA----EMIESGDLLRLSEQVIRP 308 (417)
T ss_pred -CEEEEeehhhcCCCCcceeEEEccHHHHHHHHhccce-----eeecCCCccHH-HHH----HHhhcchHHHHHHHhhhH
Confidence 3568899999999899999999999987766432211 12333443332 211 11111111111111
Q ss_pred -HHHHHH----HHHHHHHhcCCeEeecCCeeEEEEe----cCC-cHHHhhcee------e-------------cccCCEE
Q 011842 373 -CLRNAH----YLKDRLLDAGISAMLNELSSTVVFE----RPQ-DEEFVRRWQ------L-------------ACQGNIA 423 (476)
Q Consensus 373 -~~~~a~----~l~~~L~~~g~~~~~~~~~~iv~f~----~~~-~~~~~~~~~------l-------------~~~~~~l 423 (476)
.++.++ .|+..|-+.+.. +..|...|..|- .|- +.++.+++. + +....++
T Consensus 309 FY~~~~q~~~~~l~~~lp~~~~~-iHkpEGAIFlWLWf~dLPItt~~LYq~LKa~Gvl~VPG~~FFpGl~~ewpH~hqC~ 387 (417)
T COG3977 309 FYRNRVQTTIAILRRYLPEYRCL-IHKPEGAIFLWLWFKDLPITTEELYQRLKARGVLMVPGHYFFPGLDKEWPHTHQCM 387 (417)
T ss_pred HHHHHHHHHHHHHHHhcCcccee-eecCCcceeehhhhccCCCCHHHHHHHHHhCeEEEecccccCCCCCCCCCCccceE
Confidence 122222 234444433432 334444454432 222 233333221 1 2234678
Q ss_pred EEEEcCCCCHHHHHHHHHHHHHHHHHHHhc
Q 011842 424 HVVVMPNVTIDKLDDFLNELIENRSTWYED 453 (476)
Q Consensus 424 Rv~~~~~~T~edid~~~~~l~~~~~~~~~~ 453 (476)
|++.. -+++.|++=+.+|.+..++.+++
T Consensus 388 Rmn~~--~~~~~ie~Gva~lae~ve~~yq~ 415 (417)
T COG3977 388 RMNYV--PEPEKIEKGVAILAEEVERAYQE 415 (417)
T ss_pred EEecC--CCHHHHHHHHHHHHHHHHHHHhc
Confidence 87654 46888999999998888887754
No 365
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.25 E-value=1e-08 Score=107.35 Aligned_cols=291 Identities=12% Similarity=0.092 Sum_probs=162.2
Q ss_pred HHHHHHHHHHHHHcCCCCCc-ccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHH-HcC-----------
Q 011842 139 QFEVGVLDWFARLWELENNE-YWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAAR-MYR----------- 205 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~-~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~-~~G----------- 205 (476)
+.+.++.+.+.+++...... ...+++++||+|+-.|++.+|....+..|+.-+.+|..+...+. +.|
T Consensus 101 ~~~~~lAe~L~~~~p~~~~~~~~~f~~~SGsEAve~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~ 180 (459)
T PRK06931 101 PLKDAFSEYLLSLLPGQGKEYCLQFTGPSGADAVEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGL 180 (459)
T ss_pred HHHHHHHHHHHHhCCCccccceEEEeCCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccCCCCC
Confidence 66667788888877432111 12355689999999999999976555566665555544332222 211
Q ss_pred -CeEEEEeCCCCC--------ccCHHHH----HHHHHc---CCCCcEEEEEeeCCCccccccC----HHHHHHHHHHhCC
Q 011842 206 -MECVKVDCLISG--------EIDCADF----KAKLLQ---NKDKPAIINVNIGTTVKGAVDD----LDLVIQTLEESGF 265 (476)
Q Consensus 206 -~~v~~v~~~~~g--------~~D~~~L----e~~l~~---~~~~p~~vv~t~gtt~tG~id~----l~~I~~ia~~~g~ 265 (476)
..+..+|..... .-+.+.+ ++.+.+ ..+....|++.-....-|.+.| +++|.++|++||+
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~ 260 (459)
T PRK06931 181 MPGVQFMPYPHEYRCPLGIGGEAGVKALTYYFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGI 260 (459)
T ss_pred CCCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCC
Confidence 123334432111 1123333 333332 1233455666433444565543 8999999999999
Q ss_pred CCCceEEEEecCcccccccccccC-CCCCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccC
Q 011842 266 TQDRFYIHCDGALFGLMMPFVKKA-PKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMG 344 (476)
Q Consensus 266 ~~~~~~lhvD~a~~g~~~~~~~~~-~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~ 344 (476)
++++|+++.|+--...-.. ..+.. ..|.++++ |.++.++++|+++.+++. +.+.. .. ...|+.+
T Consensus 261 -----LlI~DEV~tGfGRtG~~~a~~~~gv--~PDivt~g--K~l~gG~Pi~av~~~~~~-~~~~~--~~---~~~T~~g 325 (459)
T PRK06931 261 -----LLIVDEVQAGFARTGKMFAFEHAGI--EPDIIVMS--KAVGGGLPLAVLGIKKEF-DAWQP--GG---HTGTFRG 325 (459)
T ss_pred -----EEEEecchhcCCcCchHHHhhhcCC--CCCEEEec--ccccCCcceeeeeeHHHH-hhccC--CC---CCCCCCC
Confidence 9999999876521110000 01111 27888875 888888999998887653 44321 11 1122332
Q ss_pred CCCChhHHHHHHH---HHHhChhcHHHHHHHHHHHHHHHHHHHHhc----CCeEeecCCeeEEE--EecCC---------
Q 011842 345 SRNGHAPIFLWYT---LNRKGYKGFQKEVQKCLRNAHYLKDRLLDA----GISAMLNELSSTVV--FERPQ--------- 406 (476)
Q Consensus 345 sr~~~~~l~~~~~---l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----g~~~~~~~~~~iv~--f~~~~--------- 406 (476)
. +++..++ ++.+..+ +..++..++.++|.+.|++. ++..-......++. |..+.
T Consensus 326 n-----pla~aaala~L~~l~~~---~l~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~Glm~giel~~~~~~~~~~~~~ 397 (459)
T PRK06931 326 N-----QLAMATGLTTLKILKEE---NLAQNAAERGEWLKAQLAELQKRYPCIGNVRGRGLMIGIEIVDERQPADAMGSY 397 (459)
T ss_pred C-----HHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHhCCCeEeEecCceEEEEEEccCcccccccccC
Confidence 2 3443443 4433333 35566667777777777653 32111111112222 21110
Q ss_pred --cHHH---------hhceeecc---cCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHh
Q 011842 407 --DEEF---------VRRWQLAC---QGNIAHVVVMPNVTIDKLDDFLNELIENRSTWYE 452 (476)
Q Consensus 407 --~~~~---------~~~~~l~~---~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~~ 452 (476)
+... .+++.+.. .++.+|+.....+|++|||.++++|+++.+.+-|
T Consensus 398 ~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~~~~ 457 (459)
T PRK06931 398 PADGELAAAIQKACFENGLLLERGGRNGNVVRLLPPLLITQAECEEFIDRFEQALLAAVK 457 (459)
T ss_pred CccHHHHHHHHHHHHHCCcEEeecCCCCCEEEEECCCCcCHHHHHHHHHHHHHHHHHHHh
Confidence 1111 12333322 2478999999999999999999999999877654
No 366
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.24 E-value=1.7e-08 Score=105.93 Aligned_cols=292 Identities=13% Similarity=0.048 Sum_probs=163.1
Q ss_pred HHHHHHHHHHHHHcCCCCC-cccEEEc-CCchhHHHHHHHHHHhhCCCcEEEecCCC-chHHHHHHHHcC----------
Q 011842 139 QFEVGVLDWFARLWELENN-EYWGYIT-NCGTEGNLHGILVGREVFPDGILYASRES-HYSVFKAARMYR---------- 205 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~-~~~g~~t-~ggt~An~~al~aa~~~~p~~~Vl~s~~~-H~S~~~~~~~~G---------- 205 (476)
+.+.++.+.+.+++.-+-. ....+|+ ++||+|+-.|++.+|....+..|+.-+.+ |....-+..+.|
T Consensus 106 ~~~~~la~~L~~~~p~~~~~~~~v~f~~~SGSEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~ 185 (464)
T PRK06938 106 PVKDQFVQDLFASLPEAFAREAKIQFCGPTGTDAVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGA 185 (464)
T ss_pred HHHHHHHHHHHHhCcccccccceEEEeCCCcHHHHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccccCCC
Confidence 4555666667766532110 0135555 79999999999999975444555554444 433222222221
Q ss_pred C--eEEEEeCCCCC------------ccCHHHHHHHHHcCC---CCcEEEEEeeCCCccccccC----HHHHHHHHHHhC
Q 011842 206 M--ECVKVDCLISG------------EIDCADFKAKLLQNK---DKPAIINVNIGTTVKGAVDD----LDLVIQTLEESG 264 (476)
Q Consensus 206 ~--~v~~v~~~~~g------------~~D~~~Le~~l~~~~---~~p~~vv~t~gtt~tG~id~----l~~I~~ia~~~g 264 (476)
. ++..+|..... ..+++.+++.+.+.. ..+..|++.-....-|.+.| ++++.++|++||
T Consensus 186 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~g 265 (464)
T PRK06938 186 LLPGVQFLPYPYDYRCPFGLGGEAGVRANLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAG 265 (464)
T ss_pred CCCCcEEeCCCccccccccCchhhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcC
Confidence 1 23344432111 124677888886432 23456666533444465543 899999999999
Q ss_pred CCCCceEEEEecCcccccccccccC-CCCCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCccc
Q 011842 265 FTQDRFYIHCDGALFGLMMPFVKKA-PKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIM 343 (476)
Q Consensus 265 ~~~~~~~lhvD~a~~g~~~~~~~~~-~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~ 343 (476)
+ ++++|+++.|+--...-.. ..+.+ ..|.++++ |.++.+.++|.++.+++. +.+.. .+. ..|+.
T Consensus 266 i-----LlI~DEV~tGfGRtG~~~a~e~~gv--~PDiv~~g--KglggG~PlsAv~~~~~~-~~~~~--~~~---~~T~~ 330 (464)
T PRK06938 266 I-----PLIVDEIQSGFGRTGKMFAFEHAGI--IPDVVVLS--KAIGGSLPLAVVVYREWL-DTWQP--GAH---AGTFR 330 (464)
T ss_pred C-----EEEEeccccCCCcCcHHHHHHhcCC--CCCEEEee--ccccCCCceEEEeehhHh-hccCC--CCC---CCCCC
Confidence 9 9999999876521110000 01121 26988875 888888999999998764 43321 111 11222
Q ss_pred CCCCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhc----CCeE-eecCCee-EEEEecCC-----------
Q 011842 344 GSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDA----GISA-MLNELSS-TVVFERPQ----------- 406 (476)
Q Consensus 344 ~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----g~~~-~~~~~~~-iv~f~~~~----------- 406 (476)
+. +++..++++.+..-.-++..++..++.++|.+.|++. ++.. +...+.. -+-|..+.
T Consensus 331 gn-----pla~Aaa~a~L~~l~~~~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Glm~gie~~~~~~~~~~~~~~~~ 405 (464)
T PRK06938 331 GN-----QMAMAAGSATLRYIKEHRLAEHAAAMGERLREHLRQLQRDYPQLGDVRGRGLMLGVEIVDPQGEPDALGHPPA 405 (464)
T ss_pred cC-----HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEeccCcccccccccCCc
Confidence 22 3444444444322112345667777778888887663 3211 1122221 12222110
Q ss_pred cHH----H-----hhceeecc---cCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 011842 407 DEE----F-----VRRWQLAC---QGNIAHVVVMPNVTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 407 ~~~----~-----~~~~~l~~---~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~ 450 (476)
+.. + .+++.+.. .++.+|+.....+|++|||.++++++++.+.+
T Consensus 406 ~~~~~~~~~~~~~~~Gll~~~~g~~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~~ 461 (464)
T PRK06938 406 NGELASLIQRECLRRGLILELGGRHGSVVRFLPPLIITAEQIDEVAEIFAEAVAAA 461 (464)
T ss_pred cHHHHHHHHHHHHHCCeEEeecCCCCCEEEEECCCccCHHHHHHHHHHHHHHHHHH
Confidence 111 1 12333322 24788988888899999999999999988654
No 367
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.24 E-value=8.7e-09 Score=107.47 Aligned_cols=283 Identities=13% Similarity=0.077 Sum_probs=153.0
Q ss_pred HHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhC---------------------------CCcEEEecCC
Q 011842 140 FEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVF---------------------------PDGILYASRE 192 (476)
Q Consensus 140 le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~---------------------------p~~~Vl~s~~ 192 (476)
+.+.+.+.+.++..-+. ...+|+++|++||-.|+..|+... ++..|+.-..
T Consensus 106 la~~l~~~l~~~~p~~~--~~v~f~~SGsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~ 183 (464)
T TIGR00699 106 WAKILKEGILKVAPKGQ--DQVWTGMSGSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKG 183 (464)
T ss_pred HHHHHHHhHHhhCCCCc--CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECC
Confidence 44444333344543111 248999999999999999997531 0124555444
Q ss_pred C-chHHHHHHHHcCC-----------eEEEEeCCC-C-------------CccCHHHHHHHHHcCCCCcEEEEEeeCCCc
Q 011842 193 S-HYSVFKAARMYRM-----------ECVKVDCLI-S-------------GEIDCADFKAKLLQNKDKPAIINVNIGTTV 246 (476)
Q Consensus 193 ~-H~S~~~~~~~~G~-----------~v~~v~~~~-~-------------g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~ 246 (476)
+ |.....+....|- ....+|... . ..-+++.|++++.+.......|++.-....
T Consensus 184 syHG~t~~als~t~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~EPv~g~ 263 (464)
T TIGR00699 184 AFHGRLFGSLSTTRSKPIHKLDIPAFDWPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAIIVEPIQSE 263 (464)
T ss_pred CcCCccHHHHHhcCCccccccCCCCCCceecCCCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEEEEEEeCCCCC
Confidence 4 4433333333221 112222211 0 012467788888765445566777655777
Q ss_pred cccccC----HHHHHHHHHHhCCCCCceEEEEecCccccccccccc-C-CCCCCcccccEEEEcCCCCCCCCCCceeEEe
Q 011842 247 KGAVDD----LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKK-A-PKVSFKKPIGSVSVSGHKFVGCPMPCGVQIT 320 (476)
Q Consensus 247 tG~id~----l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~-~-~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~ 320 (476)
.|.+.| +++|.++|++||+ ++++|+++.|+-. .... . ..+.+....|.++++ |.+++ .|+++.
T Consensus 264 ~G~~~~~~~yl~~lr~lc~~~g~-----lLI~DEV~tGfGr-tG~~fa~e~~gv~~~PDi~t~g--K~lg~---gG~~~~ 332 (464)
T TIGR00699 264 GGDNHASPDFFRKLRDITKKHNV-----AFIVDEVQTGVGA-TGKFWAHEHWNLDDPPDMVTFS--KKFQT---AGYFFH 332 (464)
T ss_pred CCCcCCCHHHHHHHHHHHHHcCC-----EEEEeeeeeCCCC-CcchhHHHhcCCCCCCCEEEeh--hhhcc---CCcccc
Confidence 788877 9999999999999 9999999866421 1110 0 012222237887764 88752 233333
Q ss_pred ehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhc----C-CeEeec-
Q 011842 321 RMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDA----G-ISAMLN- 394 (476)
Q Consensus 321 ~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----g-~~~~~~- 394 (476)
+ +.+.. ....+.. .|+.+.. .......++++.+..+ +..++..++.++|.+.|++. + ...-+.
T Consensus 333 ~-~~~~~--~~~~~~~---~T~~gnp--~~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vRg 401 (464)
T TIGR00699 333 D-PAFRP--NKPYRQF---NTWMGDP--SRALILREIIQEIKRK---DLLENVAHVGDYLYTGLEDLQKKYPEFIQNLRG 401 (464)
T ss_pred c-hhccC--CCCcccc---cCCCCCH--HHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHhCCCceeeecc
Confidence 3 21110 0011110 1222111 1122222344444332 35556666667777777664 3 111112
Q ss_pred -CCeeEEEEecCCcH---HH-----hhceeecccC-CEEEEEEcCCCCHHHHHHHHHHHHHH
Q 011842 395 -ELSSTVVFERPQDE---EF-----VRRWQLACQG-NIAHVVVMPNVTIDKLDDFLNELIEN 446 (476)
Q Consensus 395 -~~~~iv~f~~~~~~---~~-----~~~~~l~~~~-~~lRv~~~~~~T~edid~~~~~l~~~ 446 (476)
....++.+..++.. .+ .+++.+...+ +.+|+.....+|++|||.++++|.++
T Consensus 402 ~G~Glm~gie~~~~~~~~~i~~~~~~~Gvl~~~~g~~~ir~~Ppl~it~~eid~~~~~l~~~ 463 (464)
T TIGR00699 402 KGRGTFIAWDTPDEAKRDKLLKKARNNGVNIGGCGVKAIRLRPMLVFQKHHADIFLEIISKI 463 (464)
T ss_pred cCeEEEEEEecCCHHHHHHHHHHHHHCCcEEecCCCCeEEEeCCCCCCHHHHHHHHHHHHHh
Confidence 23455555554321 11 2333443333 78999999999999999999999875
No 368
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.23 E-value=7e-09 Score=108.00 Aligned_cols=284 Identities=13% Similarity=0.045 Sum_probs=147.7
Q ss_pred HHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhC---------C---CcEEEecCCC-chHHHHHHHHcCCe-E
Q 011842 143 GVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVF---------P---DGILYASRES-HYSVFKAARMYRME-C 208 (476)
Q Consensus 143 ~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~---------p---~~~Vl~s~~~-H~S~~~~~~~~G~~-v 208 (476)
++.+.++++.+.+ .-...+|+++||+|+-.|+..+|... + +..|+.-+.+ |....-+....|-. .
T Consensus 89 ~l~~~l~~~~~~~-~~~~v~f~~sGsEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~ 167 (431)
T TIGR03251 89 RFVDTFARVLGDP-ALPHLFFIEGGALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPR 167 (431)
T ss_pred HHHHHHHHhcCCC-CcCEEEEeCCcHHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccc
Confidence 4555566654211 11248899999999999999998531 1 2455555544 43333333222211 0
Q ss_pred E----------EE--e-----CCCCC--------ccCHHHHHHHHHcCCCCcEEEEEeeCCCccccc----cCHHHHHHH
Q 011842 209 V----------KV--D-----CLISG--------EIDCADFKAKLLQNKDKPAIINVNIGTTVKGAV----DDLDLVIQT 259 (476)
Q Consensus 209 ~----------~v--~-----~~~~g--------~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~i----d~l~~I~~i 259 (476)
. .+ | .+... .-+++++++.+......+..|++.-.....|.+ +.+++|.++
T Consensus 168 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~l 247 (431)
T TIGR03251 168 KTARFPKFDWPRIDNPKLTFPLDAPNLDQVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRAL 247 (431)
T ss_pred cccCCCCCCCccCCCCcccCCccccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHH
Confidence 0 01 1 00000 123556677776555566777776556666765 359999999
Q ss_pred HHHhCCCCCceEEEEecCcccccccccccC-CCCCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCC
Q 011842 260 LEESGFTQDRFYIHCDGALFGLMMPFVKKA-PKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASR 338 (476)
Q Consensus 260 a~~~g~~~~~~~lhvD~a~~g~~~~~~~~~-~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~ 338 (476)
|++||+ ++++|+++.|+-..+.-.. ..+.. ..|.++++ |.+ ..+|++ .+++..+............
T Consensus 248 c~~~g~-----llI~DEV~tG~GrtG~~~a~~~~gv--~PDi~~~g--K~~---~~~g~~-~~~~i~~~~~~~~~~~~~~ 314 (431)
T TIGR03251 248 CDEHDA-----LLIFDEVQTGVGLTGTAWAYQQLGV--QPDIVAFG--KKT---QVCGIM-AGRRVDEVADNVFAVPSRL 314 (431)
T ss_pred HHHcCC-----EEEEecchhccCccchHHHHHhcCC--CCCEEEec--ccC---ccceEE-ecchHHHhhhhcccCcccc
Confidence 999999 9999999986422110000 00111 37888764 654 224444 4443211110000000001
Q ss_pred CCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhc----C-CeEeecCCeeEEEEecCCcH---HH
Q 011842 339 DATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDA----G-ISAMLNELSSTVVFERPQDE---EF 410 (476)
Q Consensus 339 ~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----g-~~~~~~~~~~iv~f~~~~~~---~~ 410 (476)
..|+.+.. .......++++.+..++ ..++..++.++|.++|++. + +..-......++.+..++.. .+
T Consensus 315 ~~T~~gnp--l~~aaa~a~L~~l~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~~~~~~~~~~~ 389 (431)
T TIGR03251 315 NSTWGGNL--VDMVRATRILEIIEEER---LVDNARVQGAHLLARLHELAAEFPHLVSNPRGRGLMCAFDLPSTADRDEV 389 (431)
T ss_pred CCCCCCCH--HHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHHhCccceecccccceeEEEEeCCHHHHHHH
Confidence 12222221 11222223444443333 4455556666676666552 3 22111222344445544321 11
Q ss_pred -----hhceeec-ccCCEEEEEEcCCCCHHHHHHHHHHHHH
Q 011842 411 -----VRRWQLA-CQGNIAHVVVMPNVTIDKLDDFLNELIE 445 (476)
Q Consensus 411 -----~~~~~l~-~~~~~lRv~~~~~~T~edid~~~~~l~~ 445 (476)
.+++.+. ...+.+|++....+|++|||+++++|.+
T Consensus 390 ~~~l~~~Gvl~~~~g~~~lr~~P~l~~t~~eid~~l~~l~~ 430 (431)
T TIGR03251 390 IRQLYREGVLLLGCGERSIRFRPPLTVTREEIDAAIDAIRR 430 (431)
T ss_pred HHHHHhCCeEEecCCCCeEEEECCccCCHHHHHHHHHHHHh
Confidence 2334443 3347899999999999999999999875
No 369
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.22 E-value=1.3e-08 Score=106.13 Aligned_cols=290 Identities=13% Similarity=0.038 Sum_probs=158.0
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhC-----------C-CcEEEecCCC-chHHHHHHHHcC
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVF-----------P-DGILYASRES-HYSVFKAARMYR 205 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~-----------p-~~~Vl~s~~~-H~S~~~~~~~~G 205 (476)
+...++.+.++++.+ +..-...+|+++||+||-.|+..+|... + +..|+.-+.+ |....-+..+.|
T Consensus 92 ~~~~~la~~l~~~~~-p~~~~~v~f~~SGsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~ 170 (443)
T PRK08297 92 VEMARFVDTFARVLG-DPELPHLFFVDGGALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTN 170 (443)
T ss_pred HHHHHHHHHHHhhcC-CCCCCEEEEeCchHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcC
Confidence 344456666777652 1111248999999999999999997531 1 2445555544 433322332322
Q ss_pred CeE-----------EEEeCC----C-CC----------ccCHHHHHHHHHcCCCCcEEEEEeeCCCccccc----cCHHH
Q 011842 206 MEC-----------VKVDCL----I-SG----------EIDCADFKAKLLQNKDKPAIINVNIGTTVKGAV----DDLDL 255 (476)
Q Consensus 206 ~~v-----------~~v~~~----~-~g----------~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~i----d~l~~ 255 (476)
... ..++.. + .+ .-|++.+++.+.+....+..|++.-....-|.+ +-+++
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~ 250 (443)
T PRK08297 171 TDPRKTARFPKFDWPRIDNPKLRFPLPGEDLEEVEALEAEALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAA 250 (443)
T ss_pred CcccccccCCCCCccccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHH
Confidence 110 001100 0 00 013566777887665666777776556666766 44999
Q ss_pred HHHHHHHhCCCCCceEEEEecCcccccccccccC-CCCCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhc--CC-
Q 011842 256 VIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKA-PKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLS--SN- 331 (476)
Q Consensus 256 I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~-~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~--~~- 331 (476)
|.++|++||+ ++++|+++.|+-....-.. ..+.. ..|.+++ .|.+. .|.++++++....+. ..
T Consensus 251 lr~lc~~~g~-----llI~DEV~tGfGRtG~~~a~~~~gv--~PDiv~~--gK~l~----~~a~l~~~~i~~~~~~~~~~ 317 (443)
T PRK08297 251 MRELCDEHDA-----LLIFDEVQTGVGLTGTAWAYQQLGV--RPDIVAF--GKKTQ----VCGIMAGRRVDEVEDNVFAV 317 (443)
T ss_pred HHHHHHHcCC-----EEEEechhhccCccchHHHHHhcCC--CCCEEEe--ccccc----ccceecchHHHHhhhhhccC
Confidence 9999999999 9999999976422110000 00111 2688875 48763 344455554321110 00
Q ss_pred ccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhc----CCeE-eecCCeeEEEEecCC
Q 011842 332 VEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDA----GISA-MLNELSSTVVFERPQ 406 (476)
Q Consensus 332 ~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----g~~~-~~~~~~~iv~f~~~~ 406 (476)
..+. ..|+.+ .++...++++.+..-.-++.+++..++.++|.++|++. +... -......++.+..++
T Consensus 318 ~~~~---~~T~~g-----npl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~vrg~G~~~~i~~~~ 389 (443)
T PRK08297 318 SSRI---NSTWGG-----NLVDMVRARRILEVIEEDGLVENAARQGEYLLARLEELAAEFPAVVSNVRGRGLMCAFDLPT 389 (443)
T ss_pred cccc---CCCCCc-----cHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHCCCcceeeeccceEEEEEecC
Confidence 0010 112222 23444444444321112346667777888888887763 3221 112223444444433
Q ss_pred c---HHH-----hhceeec-ccCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 011842 407 D---EEF-----VRRWQLA-CQGNIAHVVVMPNVTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 407 ~---~~~-----~~~~~l~-~~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~ 450 (476)
. ..+ .+++.+. ...+.+|++....+|++|||.++++|.++.+++
T Consensus 390 ~~~~~~~~~~l~~~Gvl~~~~~~~~lr~~P~l~~t~~eid~~l~~l~~~l~~~ 442 (443)
T PRK08297 390 TADRDEVIRRLWEEGVLVLPCGERSIRFRPALTVTTEEIDAAIDALRRALPEV 442 (443)
T ss_pred HHHHHHHHHHHHHCCEEEecCCCCeEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 2 112 2333343 334678998888899999999999999987654
No 370
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.21 E-value=8.5e-09 Score=105.00 Aligned_cols=298 Identities=14% Similarity=0.084 Sum_probs=165.8
Q ss_pred HHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhh-----CC-CcEEEecCCCc-hHHHHHHHHcCC--------
Q 011842 142 VGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREV-----FP-DGILYASRESH-YSVFKAARMYRM-------- 206 (476)
Q Consensus 142 ~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~-----~p-~~~Vl~s~~~H-~S~~~~~~~~G~-------- 206 (476)
.++.+.|+++..-. +-...+||+|||+|+-+|+.+++.+ .| +..+|.-..+| .+-.-++.+.|.
T Consensus 90 ~~LA~~L~~~aP~~-~l~~vFf~~sGSeAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~ 168 (449)
T COG0161 90 IELAEKLAELAPEG-GLDHVFFTDSGSEAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFY 168 (449)
T ss_pred HHHHHHHHHhCCCC-CccEEEEeCCchHHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCchhhhhhhc
Confidence 45667777777611 0123999999999999999999874 23 23455555544 333333333331
Q ss_pred -----eEEEEeCCC------CCc------cCHHHHHHHHHcCC-CCcEEEEEeeCC-CccccccC----HHHHHHHHHHh
Q 011842 207 -----ECVKVDCLI------SGE------IDCADFKAKLLQNK-DKPAIINVNIGT-TVKGAVDD----LDLVIQTLEES 263 (476)
Q Consensus 207 -----~v~~v~~~~------~g~------~D~~~Le~~l~~~~-~~p~~vv~t~gt-t~tG~id~----l~~I~~ia~~~ 263 (476)
.+..+|... ++. -+.+.||+.|.+.. .+...+++.-.- ...|.+-| +++|.++|++|
T Consensus 169 ~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky 248 (449)
T COG0161 169 DPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKY 248 (449)
T ss_pred cccccCceecCCCcccccCCCCCChHHHHHHHHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHc
Confidence 222333321 111 23678888888865 555556664333 33566644 89999999999
Q ss_pred CCCCCceEEEEecCcccccccccccCCCCCCcccccEEEEcCCCCCCCC-CCceeEEeehhhhhhhcCCccccCCCCCcc
Q 011842 264 GFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKPIGSVSVSGHKFVGCP-MPCGVQITRMEHINVLSSNVEYLASRDATI 342 (476)
Q Consensus 264 g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~~Dsi~~s~hK~l~~p-~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~ 342 (476)
|+ ++++|++-.|+---+.--.....+ -..|+++++ |.+..+ .+.|.++++++..+.+.....=.+....|+
T Consensus 249 ~I-----LlI~DEV~tGFGRTG~~FA~e~~g-i~PDi~~~a--KGLT~GY~Pl~a~l~~~~I~~~~~~~~~~~f~HG~TY 320 (449)
T COG0161 249 GI-----LLIADEVATGFGRTGKMFACEHAG-IVPDILCLA--KGLTGGYLPLSAVLTSDRIYEAFSDGDAGAFMHGHTY 320 (449)
T ss_pred Cc-----EEEeecceeCCCcCchhhhhhhcC-CCCCeeeec--ccccccchhhHhHhhhHHHHHHHhcccCCeeccCCcc
Confidence 99 999999975532110000000011 126888877 877544 467888889887776643310000111223
Q ss_pred cCCCCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHh-cC-CeEee--cCCeeEEEEec--CCc------HHH
Q 011842 343 MGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLD-AG-ISAML--NELSSTVVFER--PQD------EEF 410 (476)
Q Consensus 343 ~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~-~g-~~~~~--~~~~~iv~f~~--~~~------~~~ 410 (476)
.+ .+++..++++.+..-.-+..+++..++..+|.++|++ .. ...+. .....+..+.. +.. ...
T Consensus 321 sg-----hPlacAaAla~L~i~e~e~l~~~~~~~~~~l~~~L~~~l~~~p~VgdVR~~Gli~~iElv~d~~t~~~f~~~~ 395 (449)
T COG0161 321 SG-----NPLACAAALANLDILEEEDLLERVAEIGAYLQAGLQAALADHPLVGDVRGLGLIGAIELVADKATKTPFEARV 395 (449)
T ss_pred cc-----CHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcccCCcEEEeeccceEEEEEEecccccccchhhhH
Confidence 22 2455556666553333345667777889999999987 22 11111 11122323321 111 001
Q ss_pred ---------hhceeecccCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhc
Q 011842 411 ---------VRRWQLACQGNIAHVVVMPNVTIDKLDDFLNELIENRSTWYED 453 (476)
Q Consensus 411 ---------~~~~~l~~~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~~~ 453 (476)
.+++.+-..++.+-++.-.-.|+++||++++.+.+.++...++
T Consensus 396 ~~~~~~~~~e~Gl~iRp~g~~i~~~PPliit~~eid~l~~~l~~al~~~~~~ 447 (449)
T COG0161 396 GARVRAAALERGLLIRPLGDVIYLMPPLIITREEIDELVDALREALDETLAD 447 (449)
T ss_pred HHHHHHHHHHCCeEEeecCCEEEEcCCccCCHHHHHHHHHHHHHHHHHHHhc
Confidence 1222222223333333333459999999999999998876543
No 371
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=99.17 E-value=3.8e-08 Score=96.33 Aligned_cols=257 Identities=10% Similarity=-0.011 Sum_probs=167.3
Q ss_pred chhhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeC
Q 011842 134 GVHSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDC 213 (476)
Q Consensus 134 ~~~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~ 213 (476)
..+..-+++.+++++.+.-|.+.++.++++|+|+|.|+...+...... +.+-|+++-+-|+-+...+..+|+..+.+-+
T Consensus 112 SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~~-~~~GvliPiPQYPLYsAti~l~~~~~v~YyL 190 (475)
T KOG0258|consen 112 SQGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIAG-KKTGVLIPIPQYPLYSATISLLGGTQVPYYL 190 (475)
T ss_pred ccCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhcC-CCCceEeecCCCchhHHHHHHhCCcccceee
Confidence 347789999999999999998777778999999999998877766543 7888999999998888888899998877777
Q ss_pred CC--CCccCHHHHHHHHHcC--CCCcEEEEEeeCCCccccc---cCHHHHHHHHHHhCCCCCceEEEEecCccccccccc
Q 011842 214 LI--SGEIDCADFKAKLLQN--KDKPAIINVNIGTTVKGAV---DDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFV 286 (476)
Q Consensus 214 ~~--~g~~D~~~Le~~l~~~--~~~p~~vv~t~gtt~tG~i---d~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~ 286 (476)
|+ ++.+|.++|++.+.+. .-.|.++++.+|.|+||.+ ..+++|..+|.++++ .++.|++|---++...
T Consensus 191 dEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~~~~l-----~llaDEVYQ~Nvy~~~ 265 (475)
T KOG0258|consen 191 DEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEENIEGIICFAAEEGL-----VLLADEVYQDNVYTTG 265 (475)
T ss_pred ccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcHHHHHHHHHHHHHcCe-----EEechHHHHhhccCCC
Confidence 64 5899999999999764 3357777777899999998 579999999999999 9999999844333221
Q ss_pred ccCCC-----CC----CcccccEEEE-cCCC--CCCCCCCceeEEeeh---hhhhhh----c--CCccccCCCCCcccC-
Q 011842 287 KKAPK-----VS----FKKPIGSVSV-SGHK--FVGCPMPCGVQITRM---EHINVL----S--SNVEYLASRDATIMG- 344 (476)
Q Consensus 287 ~~~~~-----~~----~~~~~Dsi~~-s~hK--~l~~p~~~G~l~~~~---~~~~~l----~--~~~~yl~~~~~~~~~- 344 (476)
..-+. .. ....+-.+++ +.|| |+-++.+.|++=+-+ +..+.+ + ..+.--.+.......
T Consensus 266 skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~prv~~qi~Kl~si~lc~~V~GQ~~vdl~Vn 345 (475)
T KOG0258|consen 266 SKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNRDPRVKQQIKKLASIKLCPQVSGQKLVDLVVN 345 (475)
T ss_pred cchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecccCChhHHHHHHHHHhhhhcCCccchhhhceecC
Confidence 11000 00 0111222222 2334 344566677654322 111111 0 011111111011111
Q ss_pred -CCCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEe
Q 011842 345 -SRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFE 403 (476)
Q Consensus 345 -sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~ 403 (476)
-.++..+..+|.+ .-..+.+.+...|+.+.+.+++.....+.++...++.|.
T Consensus 346 PP~Pgd~Sy~~~~~-------Ekd~il~~l~~ra~l~~~~~ns~~gi~cn~~qGAMY~fP 398 (475)
T KOG0258|consen 346 PPKPGDPSYDLFSS-------EKDGILSSLRSRAKLTEDAFNSLEGISCNPVQGAMYLFP 398 (475)
T ss_pred CCCCCCcchhhhhh-------hhHhHHHHHHHHhHHHHHHHhhcCceeeccCccceeecc
Confidence 1122334444432 224567778888999999999976655655555565654
No 372
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.08 E-value=4e-08 Score=94.25 Aligned_cols=278 Identities=14% Similarity=0.085 Sum_probs=165.9
Q ss_pred HHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhh------CC-CcEEEecC-CC-ch-------------HH
Q 011842 140 FEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREV------FP-DGILYASR-ES-HY-------------SV 197 (476)
Q Consensus 140 le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~------~p-~~~Vl~s~-~~-H~-------------S~ 197 (476)
+--+..+++.+++|++. .+-++.|.||+-.|+..+|.+ .| +..++++. .. |. |+
T Consensus 102 ~~~~f~~~vt~lf~~~k----vlpmnTGaEa~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~ 177 (427)
T KOG1402|consen 102 VLGEFAEYVTKLFGYDK----VLPMNTGAEAVETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTDPDSW 177 (427)
T ss_pred hHHHHHHHHHHhcCcce----eeecccchhHHHHHHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEecCCcchh
Confidence 33455677889999985 677888999999999999964 13 22233222 22 21 22
Q ss_pred HHHHHHcCCeEEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC----HHHHHHHHHHhCCCCCceEEE
Q 011842 198 FKAARMYRMECVKVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD----LDLVIQTLEESGFTQDRFYIH 273 (476)
Q Consensus 198 ~~~~~~~G~~v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~----l~~I~~ia~~~g~~~~~~~lh 273 (476)
.+---.+-..+..||.+ |.++|+.+|+.. ....+++.--...-|.+-| ++++.++|++|+. +++
T Consensus 178 ~~fgp~~P~~~~~v~Y~-----d~eale~~l~~~--~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynv-----l~I 245 (427)
T KOG1402|consen 178 DGFGPFLPGVVDKVPYG-----DAEALEVALKSP--NVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNV-----LLI 245 (427)
T ss_pred hccCCCCCCcceeeccC-----CHHHHHHHhcCC--CeeEEEeeccccccceEeCCchhHHHHHHHHHhhcE-----EEE
Confidence 11111111125566665 899999999763 2234444434666777754 8999999999999 999
Q ss_pred EecCcccccccccccCCCCCCcc-cccEEEEcCCCCCC-CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhH
Q 011842 274 CDGALFGLMMPFVKKAPKVSFKK-PIGSVSVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAP 351 (476)
Q Consensus 274 vD~a~~g~~~~~~~~~~~~~~~~-~~Dsi~~s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~ 351 (476)
.|++|.|..-.+.--. .+... ..|.+.+. |.+. +-++.+.+++.++.+..+... . -||.-+..+
T Consensus 246 ~DEvQTGl~RTGk~la--~d~env~PDivilg--KalSGG~~Pvsavl~~~~im~~~~pg------e----HgsTyggNp 311 (427)
T KOG1402|consen 246 ADEVQTGLARTGKLLA--CDYENVRPDIVILG--KALSGGVYPVSAVLADDDIMLNIKPG------E----HGSTYGGNP 311 (427)
T ss_pred ehhhhhcccccCcEEE--eehhhcCCCeEEEe--ccccCCeeeeEEEEecHHHHhccCCC------c----cccccCCCh
Confidence 9999977543211000 12212 25766654 6553 346778888888765443211 0 122222234
Q ss_pred HHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCCeE------eecCCe-eEEEEe-cCCc-H-HHhhcee------
Q 011842 352 IFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISA------MLNELS-STVVFE-RPQD-E-EFVRRWQ------ 415 (476)
Q Consensus 352 l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~------~~~~~~-~iv~f~-~~~~-~-~~~~~~~------ 415 (476)
++...++.++....-++..+++..+-..|+++|.+..-.. +...+. +-+.|. .+.. . .+---+.
T Consensus 312 Lg~~vaiAalevi~eekL~era~~lG~~l~~~L~~l~~~~p~~v~~VRGrGl~~ai~i~~~~~~~~~aw~~cl~lk~~g~ 391 (427)
T KOG1402|consen 312 LGCAVAIAALEVIVEEKLVERAAKLGEILRDQLNKLQKKFPHVVKEVRGRGLLNAIVINPSKTSGQDAWDVCLALKENGL 391 (427)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhheeeccceEEEEEeccccccchhHHHHHHccccccc
Confidence 5555555554333446788888999999999999864321 222221 223333 2211 1 1111111
Q ss_pred --ecccCCEEEEEEcCCCCHHHHHHHHHHHHHHH
Q 011842 416 --LACQGNIAHVVVMPNVTIDKLDDFLNELIENR 447 (476)
Q Consensus 416 --l~~~~~~lRv~~~~~~T~edid~~~~~l~~~~ 447 (476)
-+..++.+|+..--.++++|++.-+++|++..
T Consensus 392 LAkptH~~IiRfaPPL~I~e~dl~eg~e~i~k~i 425 (427)
T KOG1402|consen 392 LAKPTHGNIIRFAPPLVISEEDLREGIEAIEKTI 425 (427)
T ss_pred ccCCCCCCeEEecCCcccCHHHHHHHHHHHHHHh
Confidence 14557899998888889999999999998764
No 373
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.07 E-value=1.2e-07 Score=93.70 Aligned_cols=281 Identities=15% Similarity=0.051 Sum_probs=154.2
Q ss_pred ccEEEcCCchhHHHHHHHHHHhhC----CC---cEEEecCCCchHHHHHHHHcCCeEEEEeCC---CC----CccCHHHH
Q 011842 159 YWGYITNCGTEGNLHGILVGREVF----PD---GILYASRESHYSVFKAARMYRMECVKVDCL---IS----GEIDCADF 224 (476)
Q Consensus 159 ~~g~~t~ggt~An~~al~aa~~~~----p~---~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~---~~----g~~D~~~L 224 (476)
..++|+++||+||..|+.+||... |- ..|.....-|.--.-++...+......|.+ ++ ---|+.+|
T Consensus 117 ~rvff~nsGTeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~~ynd~t~l 196 (433)
T KOG1401|consen 117 ERVFFCNSGTEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTAEYNDSTAL 196 (433)
T ss_pred cEEEEecCCcHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCceeecccCCHHHH
Confidence 348999999999999999998742 11 134454444533333333222222222111 11 01279999
Q ss_pred HHHHHcCCCCcEEEEEeeCCCccccc--cC--HHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCcccccE
Q 011842 225 KAKLLQNKDKPAIINVNIGTTVKGAV--DD--LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKPIGS 300 (476)
Q Consensus 225 e~~l~~~~~~p~~vv~t~gtt~tG~i--d~--l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~~Ds 300 (476)
++.++.+++....|++.-....-|.+ +| +..|.++|+++|+ .++.|+++-|+.-.........- .-..|+
T Consensus 197 ~k~~~~h~~~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~v-----l~I~DEV~tG~gR~g~~~a~e~~-~~~PDI 270 (433)
T KOG1401|consen 197 EKLFESHKGEIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGV-----LLIFDEVQTGLGRLGYGWAQEYF-GVTPDI 270 (433)
T ss_pred HHHHHhCCCceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCc-----eEEeehhhhCccccchHHHHHHh-CcCCcc
Confidence 99999988766778887666665655 33 7889999999999 99999999764332111110000 112577
Q ss_pred EEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhc-HHHHHHHHHHHHHH
Q 011842 301 VSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKG-FQKEVQKCLRNAHY 379 (476)
Q Consensus 301 i~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g-~~~~~~~~~~~a~~ 379 (476)
+++. |.|+.+.++|+.+++++..+.++.....+. ..|+.+.. .+.-.....++.+.... +++.-.....+++.
T Consensus 271 ~t~a--K~L~gGlPigA~~v~~kV~~~i~~~~~l~h--g~Tf~gnp--Lacsa~~~~l~~l~~~e~~k~vs~~~k~L~~~ 344 (433)
T KOG1401|consen 271 TTVA--KPLGGGLPIGATGVRDKVAEMISPGDHLYH--GGTFSGNP--LACSAGIKVLDELKDPETLKNVSKIGKELRKL 344 (433)
T ss_pred eeeh--hhccCCceeEEEeehHHHHhhcCCCCcccc--CcccCCCh--hhhhHHHHHHHHHcCHHHHHHHHHHHHHHHHH
Confidence 7765 999999999999999998887755433221 22344332 11112223444444333 23333333444454
Q ss_pred HHHHHHhcCCeEe--ecCCeeEEE-EecCCcH----HHhhceeecc-----cCCEEEEEE----cCCCCHHHHHHHHHHH
Q 011842 380 LKDRLLDAGISAM--LNELSSTVV-FERPQDE----EFVRRWQLAC-----QGNIAHVVV----MPNVTIDKLDDFLNEL 443 (476)
Q Consensus 380 l~~~L~~~g~~~~--~~~~~~iv~-f~~~~~~----~~~~~~~l~~-----~~~~lRv~~----~~~~T~edid~~~~~l 443 (476)
+.+.+.+.+-... ......+-+ |..|... ....++.+.. ....+|+.. .-.+|+|.+.++++++
T Consensus 345 l~e~~~~~~~~i~g~~grgl~ig~~~~~p~~~~~d~~~~~~ll~~~~~~~~~~~gv~i~P~~~l~~~~~~E~i~~~l~i~ 424 (433)
T KOG1401|consen 345 LDEYLKKTPNSICGGVGRGLVIGFEFEGPVYKFADAAREQGLLILTLGKGLLEEGVRIAPIYLLTVEHTPEVIQRLLTIL 424 (433)
T ss_pred HHHHhccCCCceeeeeeeEEEEEEEEeechhhhhhhhhhhhHHHHHHhcccccceEEEeccccccccCcHHHHHHHHHHH
Confidence 5555444332221 122222322 2223211 0001111110 012244432 3345699999999999
Q ss_pred HHHHHHHH
Q 011842 444 IENRSTWY 451 (476)
Q Consensus 444 ~~~~~~~~ 451 (476)
.+...++.
T Consensus 425 ~~~l~~~~ 432 (433)
T KOG1401|consen 425 EKVLSALN 432 (433)
T ss_pred HHHHHHhc
Confidence 99887754
No 374
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=99.03 E-value=2.1e-08 Score=101.12 Aligned_cols=225 Identities=15% Similarity=0.069 Sum_probs=129.3
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHH------hhCCCcEEEecCCCch-HHHHHHHHcC------
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGR------EVFPDGILYASRESHY-SVFKAARMYR------ 205 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~------~~~p~~~Vl~s~~~H~-S~~~~~~~~G------ 205 (476)
+...++.+++.++++-. ....+|+++|++|+-.|+..++ ....+..|+.-+.+|. ....+..+.+
T Consensus 59 ~~~~~la~~L~~~~p~~--~~~v~f~~sGseAve~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~ 136 (339)
T PF00202_consen 59 PEAAELAEKLAELFPGG--LDRVFFANSGSEAVEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRK 136 (339)
T ss_dssp HHHHHHHHHHHHHSSTT--EEEEEEESSHHHHHHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHT
T ss_pred cchhhhhhhhhhccccc--cceeeeccCchHHHHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCccccc
Confidence 55667788888888332 2348999999999999999999 3224456665555543 2222222211
Q ss_pred ------CeEEEEeCCCCCc-----cCHHHHHHHHHc-CCCCcEEEEEeeCCCccccccC----HHHHHHHHHHhCCCCCc
Q 011842 206 ------MECVKVDCLISGE-----IDCADFKAKLLQ-NKDKPAIINVNIGTTVKGAVDD----LDLVIQTLEESGFTQDR 269 (476)
Q Consensus 206 ------~~v~~v~~~~~g~-----~D~~~Le~~l~~-~~~~p~~vv~t~gtt~tG~id~----l~~I~~ia~~~g~~~~~ 269 (476)
-.+..+|...... -..+.+++.+.+ ..+....|++.-..+..|.+.+ +++|.++|++||+
T Consensus 137 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gi---- 212 (339)
T PF00202_consen 137 GFGPLYPGVVFVPFPDPAADEEEQACLNALEELIAALNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGI---- 212 (339)
T ss_dssp TTCSSSTTEEEEETTCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-----
T ss_pred cccccccccccccCCccchhhhHHHHHHHHHHHHHhhcCCcEEEEEEeccccccCccccccchhhehccccccccc----
Confidence 1356677652111 011224444432 2333456666544555565532 8999999999999
Q ss_pred eEEEEecCcccccccccccCCCCCC---cccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCC
Q 011842 270 FYIHCDGALFGLMMPFVKKAPKVSF---KKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSR 346 (476)
Q Consensus 270 ~~lhvD~a~~g~~~~~~~~~~~~~~---~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr 346 (476)
++++|+++.|+.--. + .+.. .-..|+++++ |.++.+.++|.+++++++.+.+.... . ..|+.+
T Consensus 213 -llI~DEV~tG~gRtG-~---~~a~~~~gv~PDiv~~g--K~l~gG~p~sav~~~~~i~~~~~~~~--~---~~T~~g-- 278 (339)
T PF00202_consen 213 -LLIADEVQTGFGRTG-K---FFASEHYGVDPDIVTFG--KGLGGGLPISAVLGSEEIMEAFQPGS--H---GSTFGG-- 278 (339)
T ss_dssp -EEEEEETTTTTTTTS-S---SSGHHHHTSSSSEEEEE--GGGGTTSSEEEEEEEHHHHTTSCTTS--S---TCTTTT--
T ss_pred -ceecccccccccccC-C---ccceecccccCcccccc--cchhhhhhcccccccchhhccccccc--c---cccccc--
Confidence 999999997753211 0 0111 1126999987 99988899999999998766552211 1 112221
Q ss_pred CChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHh
Q 011842 347 NGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLD 386 (476)
Q Consensus 347 ~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~ 386 (476)
.++...++++.+..-.-.+..++..++.++|.++|++
T Consensus 279 ---~p~~~aaa~~~l~~~~~~~~~~~~~~~g~~l~~~L~~ 315 (339)
T PF00202_consen 279 ---NPLSCAAALATLEILEEEDLLERVRELGERLREGLRE 315 (339)
T ss_dssp ----HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHH
T ss_pred ---chHhhhhhhhHHHhhccHHHHHHHHHHHHHHHHHHHH
Confidence 2344444444332111123455566666777777665
No 375
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=99.01 E-value=4.8e-08 Score=95.87 Aligned_cols=264 Identities=17% Similarity=0.143 Sum_probs=153.7
Q ss_pred cEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCC-chHHHHHHHHcCCeEEEEeCC-----------CC-------Cc--
Q 011842 160 WGYITNCGTEGNLHGILVGREVFPDGILYASRES-HYSVFKAARMYRMECVKVDCL-----------IS-------GE-- 218 (476)
Q Consensus 160 ~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~-H~S~~~~~~~~G~~v~~v~~~-----------~~-------g~-- 218 (476)
..+|+++|||||-+|++++|.....-.||.-+.+ |.+-..++.+.++...+.+.. ++ +.
T Consensus 111 ~vfF~nsGsEANelal~mar~Yt~~~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~ 190 (442)
T KOG1404|consen 111 VVFFVNSGSEANELALKMARLYTGNLDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNE 190 (442)
T ss_pred EEEEecCCchHHHHHHHHHHHhcCCceEEEeeccccCCchhhcccccCCcccccCCCCCCcccccCCCCcccccCCCCch
Confidence 4899999999999999999986444455544444 544444444444433332111 00 00
Q ss_pred -----cCHHHHHHHHHcC-CCCcEEEEEeeCCCccccccC----HHHHHHHHHHhCCCCCceEEEEecCccccccccccc
Q 011842 219 -----IDCADFKAKLLQN-KDKPAIINVNIGTTVKGAVDD----LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKK 288 (476)
Q Consensus 219 -----~D~~~Le~~l~~~-~~~p~~vv~t~gtt~tG~id~----l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~ 288 (476)
--.++|+..+... ...+...++......-|.+++ +++..++|+++|. +++.|+++.|+---+ +
T Consensus 191 ~e~~d~~a~~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Gg-----l~IaDEVqtGfGRtG--~ 263 (442)
T KOG1404|consen 191 EEASDRYAKELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGG-----LFIADEVQTGFGRTG--H 263 (442)
T ss_pred hhhHHHHHHHHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHHHcCC-----EEEehhhhhcccccc--c
Confidence 1114445555433 334556667666667788876 8999999999999 999999997753221 1
Q ss_pred CCCCCCcc---cccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhc
Q 011842 289 APKVSFKK---PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKG 365 (476)
Q Consensus 289 ~~~~~~~~---~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g 365 (476)
-+.+.. ..|+++.. |.++.+.++|.+++.++..+.+....+|.+ |+.+- +++..+++..+....
T Consensus 264 --~wgfe~h~v~PDIvTmA--KgiGnG~Pl~AVvtt~EIa~v~~~~~~~fn----Tyggn-----P~a~avg~aVL~Vik 330 (442)
T KOG1404|consen 264 --MWGFESHGVVPDIVTMA--KGIGNGFPLGAVVTTPEIADVLNQKSSHFN----TYGGN-----PVACAVGLAVLKVIK 330 (442)
T ss_pred --cccccccCCCccHHHHH--hhccCCCcceeeecCHHHHHHHHhcccccc----ccCCC-----chhHHHHHHHHHHHH
Confidence 123321 14666544 999999999999999998777765554442 22222 122222222222223
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcC--CeEeec-CCe-eEEEEe----c--C--CcH-------HHhh--ceeec---ccCC
Q 011842 366 FQKEVQKCLRNAHYLKDRLLDAG--ISAMLN-ELS-STVVFE----R--P--QDE-------EFVR--RWQLA---CQGN 421 (476)
Q Consensus 366 ~~~~~~~~~~~a~~l~~~L~~~g--~~~~~~-~~~-~iv~f~----~--~--~~~-------~~~~--~~~l~---~~~~ 421 (476)
-+++.++..+...||+++|.+.. ...+.. .+. .++-.. . + ... +..+ +..+- -.++
T Consensus 331 ee~LqE~aa~vG~yl~~~l~~l~d~h~iIGdVRG~GLm~GvE~V~dk~~~~pp~~~~~~~i~~~cke~Gvlvg~g~i~G~ 410 (442)
T KOG1404|consen 331 EENLQENAAEVGSYLLEKLAALKDKHPIIGDVRGRGLMLGVELVSDKSEPKPPATAEGAVIGEQCKELGVLVGKGGIHGN 410 (442)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHhhcCCceeecccceeEEEEEEecccCCCCCcchHHHHHHHHHHHHhCeeeecccccce
Confidence 35667777888999999998742 122211 111 111111 1 1 110 0111 22221 2256
Q ss_pred EEEEEEcCCCCHHHHHHHHHHH
Q 011842 422 IAHVVVMPNVTIDKLDDFLNEL 443 (476)
Q Consensus 422 ~lRv~~~~~~T~edid~~~~~l 443 (476)
.+||..-.-.|+||||.+++.+
T Consensus 411 vfriaPPlciT~edi~f~~~~~ 432 (442)
T KOG1404|consen 411 VFRIAPPLCITKEDIDFAVEYF 432 (442)
T ss_pred EEEecCCeeccHHHHHHHHHHH
Confidence 7888877778999997777655
No 376
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=99.01 E-value=1.4e-08 Score=101.13 Aligned_cols=180 Identities=17% Similarity=0.134 Sum_probs=121.6
Q ss_pred cEEEcCCchhHHHHHHHHHHhhCCCcEEE-----ecCCCchHHHHHHHHcCCeEEEEeCCCCCccCHHHHHHHHHcCCCC
Q 011842 160 WGYITNCGTEGNLHGILVGREVFPDGILY-----ASRESHYSVFKAARMYRMECVKVDCLISGEIDCADFKAKLLQNKDK 234 (476)
Q Consensus 160 ~g~~t~ggt~An~~al~aa~~~~p~~~Vl-----~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~~~Le~~l~~~~~~ 234 (476)
.+.++++.+.|++..+.+... ++.+|+ +. ..|+++...+++.|++++.|-. .++-...+++.+|.+++.
T Consensus 85 a~~ivnnn~aAVll~~~al~~--~~EvVis~g~lV~-gg~~~v~d~~~~aG~~l~EvG~--tn~t~~~d~~~AIne~ta- 158 (395)
T COG1921 85 AAAIVNNNAAAVLLTLNALAE--GKEVVVSRGELVE-GGAFRVPDIIRLAGAKLVEVGT--TNRTHLKDYELAINENTA- 158 (395)
T ss_pred heeeECCcHHHHHHHHhhhcc--CCeEEEEcccccc-CCCCChhHHHHHcCCEEEEecc--cCcCCHHHHHHHhccCCe-
Confidence 388999999998887766543 333333 23 5789999999999999988865 356688999999999986
Q ss_pred cEEEEEeeCCCccccc--cCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCcccccEEEEcCCCCCCCC
Q 011842 235 PAIINVNIGTTVKGAV--DDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKPIGSVSVSGHKFVGCP 312 (476)
Q Consensus 235 p~~vv~t~gtt~tG~i--d~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~~Dsi~~s~hK~l~~p 312 (476)
++.-.+.++. |.. -++++++++|++||+ .+++|.+.|..+-+ .+...--...++|.+++|++|.+++|
T Consensus 159 --~llkV~s~~~-~f~~~l~~~~l~~ia~~~~l-----pvivD~aSg~~v~~--e~~l~~~la~GaDLV~~SgdKllgGP 228 (395)
T COG1921 159 --LLLKVHSSNY-GFTGMLSEEELVEIAHEKGL-----PVIVDLASGALVDK--EPDLREALALGADLVSFSGDKLLGGP 228 (395)
T ss_pred --eEEEEeeccc-cccccccHHHHHHHHHHcCC-----CEEEecCCcccccc--ccchhHHHhcCCCEEEEecchhcCCC
Confidence 3323233322 333 367889999999999 99999997654321 11111111235999999999999976
Q ss_pred CCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhCh
Q 011842 313 MPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGY 363 (476)
Q Consensus 313 ~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~ 363 (476)
. .|+++.|.+++..+...+-+. .+.... ....++.++++.+-.
T Consensus 229 q-aGii~GkKelI~~lq~~~l~R-----alrv~K--~tla~l~~aLe~y~~ 271 (395)
T COG1921 229 Q-AGIIVGKKELIEKLQSHPLKR-----ALRVDK--ETLAALEAALELYLQ 271 (395)
T ss_pred c-cceEechHHHHHHHHhhhhhh-----hhhcCc--HhHHHHHHHHHHHcC
Confidence 5 999999999987665443321 112222 123456667766643
No 377
>KOG0630 consensus Predicted pyridoxal-dependent decarboxylase [Amino acid transport and metabolism]
Probab=99.00 E-value=7e-09 Score=103.73 Aligned_cols=190 Identities=18% Similarity=0.230 Sum_probs=137.6
Q ss_pred cEEEecCCCchHH-HHHHHHcCCeEE---EEe-CCC---CCccCHHHHHHHHHcC---CCCcEEEEEeeCCCccccccCH
Q 011842 185 GILYASRESHYSV-FKAARMYRMECV---KVD-CLI---SGEIDCADFKAKLLQN---KDKPAIINVNIGTTVKGAVDDL 253 (476)
Q Consensus 185 ~~Vl~s~~~H~S~-~~~~~~~G~~v~---~v~-~~~---~g~~D~~~Le~~l~~~---~~~p~~vv~t~gtt~tG~id~l 253 (476)
+.+|+|+..|.-. ..+|+.+|+... .++ .+. .|+||.-.+++.|+++ +++|.+++...|++..|..|.+
T Consensus 232 Pt~YiS~alh~~l~hYaarefGIa~~aI~~~~dhdqgeiegriDhh~feKiideDlaagkkPLilia~iGasi~GqnDmi 311 (838)
T KOG0630|consen 232 PTFYISEALHMDLLHYAAREFGIADEAIKPILDHDQGEIEGRIDHHLFEKIIDEDLAAGKKPLILIADIGASICGQNDMI 311 (838)
T ss_pred ceEEEcccccHHHHHHHHHHhCCchhheecccccccccccccccHHHHHHHHHHHHhCCCCCeEEEEeccchhhcchHHH
Confidence 5899999999754 568899998422 222 222 3689999999999875 6789999999999999999999
Q ss_pred HHHHHHHHHhC-CCCCceEEEEecCcccccccccccCC-CCCCcccccEEEEcCCCCCCCCCCceeEEeehhh---hhhh
Q 011842 254 DLVIQTLEESG-FTQDRFYIHCDGALFGLMMPFVKKAP-KVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEH---INVL 328 (476)
Q Consensus 254 ~~I~~ia~~~g-~~~~~~~lhvD~a~~g~~~~~~~~~~-~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~---~~~l 328 (476)
-+|.++|++|+ + |+|.-|- +...+.+..... ...+.+.+||++.+..-|+|.|-.--+++.|+-. ..++
T Consensus 312 ~kildi~eahakf-----WLHasGh-aiAALt~aepnnil~HV~eqldSMal~ialWLGiPSaPiV~LHRPleg~aaSaf 385 (838)
T KOG0630|consen 312 LKILDICEAHAKF-----WLHASGH-AIAALTCAEPNNILGHVEEQLDSMALNIALWLGIPSAPIVLLHRPLEGSAASAF 385 (838)
T ss_pred HHHHHHHHHhhhe-----eEeeccc-hhhheeecCcccchhHHHHHHhhccchhHHHhCCCCCceEEeecccccccchhc
Confidence 99999999998 6 9998764 221221222111 1223345899999999999998777666666421 1111
Q ss_pred cCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCCeE
Q 011842 329 SSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISA 391 (476)
Q Consensus 329 ~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~ 391 (476)
...+-| |....++.+|.++.++|.+.+.++++....+++.+.+.+++.....
T Consensus 386 esdpi~-----------rekLdaLp~Wta~q~LggKaIadmienAFll~kilfe~aSa~~eie 437 (838)
T KOG0630|consen 386 ESDPIL-----------REKLDALPLWTALQALGGKAIADMIENAFLLCKILFEGASACEEIE 437 (838)
T ss_pred ccChHH-----------HHhhccchHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhcCCcee
Confidence 111111 2224579999999999999999999999999999999988864333
No 378
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=98.98 E-value=1e-08 Score=95.27 Aligned_cols=257 Identities=14% Similarity=0.055 Sum_probs=159.2
Q ss_pred EEEcCCchhHHHHHHHHHHhhCCC-cEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccCHHHHHHHHHcCCCCcEEEE
Q 011842 161 GYITNCGTEGNLHGILVGREVFPD-GILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCADFKAKLLQNKDKPAIIN 239 (476)
Q Consensus 161 g~~t~ggt~An~~al~aa~~~~p~-~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv 239 (476)
+.+--|+-+.+-.-+++.+. || +.|+.-.++|.-+.-.+.+.+++++++|.++++.+++|++.+.++.+. ++.++.
T Consensus 89 ic~GvGsDE~ID~iiR~~c~--PGkeKIl~cPPtysMY~v~A~iNd~eVvkvpl~pdF~lnvdai~evl~~ds-~iK~~F 165 (375)
T KOG0633|consen 89 ICVGVGSDELIDLIIRCVCD--PGKEKILDCPPTYSMYVVDAAINDAEVVKVPLNPDFSLNVDAIAEVLELDS-KIKCIF 165 (375)
T ss_pred eEEecCcHHHHHHHHhheec--CCccceeecCCcceeEEEEeecCCceEEEecCCCCccccHHHHHHHHhccc-cceEEE
Confidence 55566777777777777776 77 677777777755555667789999999999999999999999998764 456889
Q ss_pred EeeCCCccccccCHHHHHHHHHHh-CCCCCceEEEEecCcccccccccccCCCCCCc-cccc--EEEEcCCCCCCCCCCc
Q 011842 240 VNIGTTVKGAVDDLDLVIQTLEES-GFTQDRFYIHCDGALFGLMMPFVKKAPKVSFK-KPIG--SVSVSGHKFVGCPMPC 315 (476)
Q Consensus 240 ~t~gtt~tG~id~l~~I~~ia~~~-g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~-~~~D--si~~s~hK~l~~p~~~ 315 (476)
+++|.++||.+-..+.|.++.+-. |. +++||+||--+... .. ...+. +.-. ++-.-++.++.++.+.
T Consensus 166 ~tSPgNPtg~~ik~~di~KiLe~p~ng-----lVVvDEAYidFsg~-~S---~~~lV~kYpNLivlqTlSKsfGLAGiRv 236 (375)
T KOG0633|consen 166 LTSPGNPTGSIIKEDDILKILEMPDNG-----LVVVDEAYIDFSGV-ES---RMKLVKKYPNLIVLQTLSKSFGLAGIRV 236 (375)
T ss_pred EcCCCCCCcccccHHHHHHHHhCCCCc-----EEEEeeeeEeeccc-cc---cchHhHhCCceeehhhhhhhcCcceeEe
Confidence 999999999998888888887743 34 89999998322110 00 11111 1122 2223334466688999
Q ss_pred eeEEeehhhhhhh-cCCccccCCCCCcccCCCCChhHHHHHHHHHHhC---hhcHHHHHHHHHHHHHHHHHHHHhcCCeE
Q 011842 316 GVQITRMEHINVL-SSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKG---YKGFQKEVQKCLRNAHYLKDRLLDAGISA 391 (476)
Q Consensus 316 G~l~~~~~~~~~l-~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g---~~g~~~~~~~~~~~a~~l~~~L~~~g~~~ 391 (476)
|+-+++.+..+-+ +...+|--+ ..+| -++|+++. .+.++...+...+-+.+|...|.+.++.-
T Consensus 237 G~~~~~~~ia~iln~~KaPYNiS----~~~s---------~~AL~Als~~n~kkme~~rdaiv~er~RL~keLt~v~~~~ 303 (375)
T KOG0633|consen 237 GYGAFPLSIAEILNRAKAPYNIS----VAGS---------VAALAALSDSNGKKMEDVRDAIVRERERLFKELTEVPFLN 303 (375)
T ss_pred ecccccHHHHHHHHhccCCcccc----chhH---------HHHHHhcCcccchHHHHHHHHHHHHHHHHHHHhhcCcccc
Confidence 9999887765444 223445211 1112 12333332 23455555666666677888888876543
Q ss_pred --eecCCeeEEEEecCC-cHHHhhce----------eecc------cCCEEEEEEcCCCCHHHHHHHHHHHHH
Q 011842 392 --MLNELSSTVVFERPQ-DEEFVRRW----------QLAC------QGNIAHVVVMPNVTIDKLDDFLNELIE 445 (476)
Q Consensus 392 --~~~~~~~iv~f~~~~-~~~~~~~~----------~l~~------~~~~lRv~~~~~~T~edid~~~~~l~~ 445 (476)
..+..+|.+..++-+ +....+++ .+.. -.+++|+++. |+|+-+.++.-|++
T Consensus 304 ~~~gg~daNFiLi~v~~~~n~~akkly~q~at~~gVvVRfrgse~~c~G~lRitvG---t~EentvL~k~~K~ 373 (375)
T KOG0633|consen 304 DYPGGSDANFILIEVTGGDNGMAKKLYKQDATKMGVVVRFRGSEEGCKGYLRITVG---TPEENTVLMKCLKQ 373 (375)
T ss_pred CCCCcccccEEEEEEcCCCcHHHHHHHHHHHHhcceEEEEcCCccccceeEEEEcC---CcccchHHHHHHHh
Confidence 223345666665432 22221111 1111 1368998873 55666666666654
No 379
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=98.95 E-value=7.3e-08 Score=94.82 Aligned_cols=268 Identities=14% Similarity=0.098 Sum_probs=167.3
Q ss_pred cEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeC-C-CCCccCHHHHHHHHHcCCCCcEE
Q 011842 160 WGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDC-L-ISGEIDCADFKAKLLQNKDKPAI 237 (476)
Q Consensus 160 ~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~-~-~~g~~D~~~Le~~l~~~~~~p~~ 237 (476)
..+-|.|||.|+-.+.-.....+|+..|++|+++...........|+++..+|. | ++..+|.+.+-+.|..-...- +
T Consensus 96 ~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~If~~aGl~v~~Y~Yyd~~~~~~df~~mla~L~~a~~~~-v 174 (396)
T COG1448 96 ATVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKAIFEAAGLEVETYPYYDAETKGLDFDGMLADLKTAPEGS-V 174 (396)
T ss_pred hheecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHHHHHhcCCceeeeeccccccccccHHHHHHHHHhCCCCC-E
Confidence 467899999999988777777779999999999998888888889999999986 3 345699999999998654322 4
Q ss_pred EEEe-eCCCccccc---cCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCC-C-ccc-ccEEEEcCCCCCC
Q 011842 238 INVN-IGTTVKGAV---DDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVS-F-KKP-IGSVSVSGHKFVG 310 (476)
Q Consensus 238 vv~t-~gtt~tG~i---d~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~-~-~~~-~Dsi~~s~hK~l~ 310 (476)
|+.. ...||||.- +..++|+++.++.++ +-++|-||-|+.--..+....+. + ... --.++.|+.|.++
T Consensus 175 vLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~l-----ip~~D~AYQGF~~GleeDa~~lR~~a~~~~~~lva~S~SKnfg 249 (396)
T COG1448 175 VLLHGCCHNPTGIDPTEEQWQELADLIKERGL-----IPFFDIAYQGFADGLEEDAYALRLFAEVGPELLVASSFSKNFG 249 (396)
T ss_pred EEEecCCCCCCCCCCCHHHHHHHHHHHHHcCC-----eeeeehhhhhhccchHHHHHHHHHHHHhCCcEEEEehhhhhhh
Confidence 4443 338999965 558899999999999 99999998554221111100000 0 111 2467888889665
Q ss_pred C-CCCceeEEee--hh-hhh----hhc--CCccccCCCCCcccCCCCChh--HHHHH---HHHHHhChhcHHHHHHHHHH
Q 011842 311 C-PMPCGVQITR--ME-HIN----VLS--SNVEYLASRDATIMGSRNGHA--PIFLW---YTLNRKGYKGFQKEVQKCLR 375 (476)
Q Consensus 311 ~-p~~~G~l~~~--~~-~~~----~l~--~~~~yl~~~~~~~~~sr~~~~--~l~~~---~~l~~~g~~g~~~~~~~~~~ 375 (476)
- +-++|.+.+- ++ ... .+. ....|- +++.+. ..+.. -.|++.-...+..+.+|..+
T Consensus 250 LYgERVGa~~vva~~~~~a~~v~sqlk~~iR~~yS---------nPP~~Ga~vva~IL~~p~Lra~W~~El~~Mr~Ri~~ 320 (396)
T COG1448 250 LYGERVGALSVVAEDAEEADRVLSQLKAIIRTNYS---------NPPAHGAAVVATILNNPELRAEWEQELEEMRQRILE 320 (396)
T ss_pred hhhhccceeEEEeCCHHHHHHHHHHHHHHHHhccC---------CCchhhHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 2 4566765543 22 111 111 112221 111111 11100 12333334567788888999
Q ss_pred HHHHHHHHHHhcCCe---EeecCCeeEEEEecCCcHH---Hhhceee--cccCCEEEEEEcCCCCHHHHHHHHHHHHHH
Q 011842 376 NAHYLKDRLLDAGIS---AMLNELSSTVVFERPQDEE---FVRRWQL--ACQGNIAHVVVMPNVTIDKLDDFLNELIEN 446 (476)
Q Consensus 376 ~a~~l~~~L~~~g~~---~~~~~~~~iv~f~~~~~~~---~~~~~~l--~~~~~~lRv~~~~~~T~edid~~~~~l~~~ 446 (476)
+++.|.+.|++.+-. ........+.++....+++ +.+.+.+ ...| |+++. ..++..|+.+.++|.++
T Consensus 321 mR~~lv~~L~~~~~~~~f~~i~~Q~GMFsy~Gls~~QV~rLree~~IY~v~sG---Ri~va-Gl~~~ni~~va~ai~~v 395 (396)
T COG1448 321 MRQALVDALKALGAPRNFDFIISQRGMFSYTGLSPEQVDRLREEFGIYLVASG---RINVA-GLNTSNIDYVAKAIAAV 395 (396)
T ss_pred HHHHHHHHHHhhCCCcccchHhhcCceeecCCCCHHHHHHHHHhccEEEecCC---eeeec-cCChhhHHHHHHHHHhh
Confidence 999999999984321 2223344555554322222 2233333 3333 77764 57889999999988764
No 380
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=98.90 E-value=4.6e-07 Score=88.81 Aligned_cols=315 Identities=14% Similarity=0.104 Sum_probs=183.8
Q ss_pred hHHHHHHHHHhhCCCC---CCcccCccchhhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHH-HHHHHHHhhCCCc
Q 011842 110 YGALAQLQHFSINNLG---DPFIESNYGVHSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNL-HGILVGREVFPDG 185 (476)
Q Consensus 110 ~~~l~~~l~~~~n~~g---~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~-~al~aa~~~~p~~ 185 (476)
++.+..+.....+-.| +..+.|+.+.-...+..++.+.+++|+++|. +|.+.|..||-.+-+ ++.+......+.+
T Consensus 18 ~~vL~~a~~e~~~~~g~g~svme~SHRsk~~~~v~~~a~~~lreLl~iPd-~Y~VlflqGGat~qf~~~p~nLl~~~~~~ 96 (365)
T COG1932 18 PEVLQQAQKELLDWNGLGMSVMEISHRSKEFKNVLEEAEKDLRELLNIPD-DYKVLFLQGGATGQFAMAPMNLLGKRGTD 96 (365)
T ss_pred HHHHHHHHHHHhhhccCCcceeeeccccHHHHHHHHHHHHHHHHHhCCCC-CceEEEEcCccHHHHHHHHHhhhcccCce
Confidence 4555555544444333 3345566555566788889999999999995 577888877755544 4444343311111
Q ss_pred EEEecCCCchHHHHHHHHcC-CeEEEEeCCC--CCc-cCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC-HHHHHHHH
Q 011842 186 ILYASRESHYSVFKAARMYR-MECVKVDCLI--SGE-IDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD-LDLVIQTL 260 (476)
Q Consensus 186 ~Vl~s~~~H~S~~~~~~~~G-~~v~~v~~~~--~g~-~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~-l~~I~~ia 260 (476)
-|.+-..+..++..+-++.. ..+....... .+. .|++..+ +.++ -.+|..+...|.+|.--| .+.+..
T Consensus 97 yv~~g~Ws~~a~~eA~~~~~~~~~~~~~~~~~~~~~iP~~~~~~--~~~~---~ayv~~~~NeTi~Gv~v~~~p~~~~-- 169 (365)
T COG1932 97 YVDTGAWSEFAIKEAKKVGKQPKLIDARIEEAGYGSIPDLSKWD--FSDN---DAYVHFCWNETISGVEVPELPDIGS-- 169 (365)
T ss_pred eEeeeehhHhHHHHHHHhcccccccccceeccCccCCCChhhcc--cCCC---ccEEEEecCCcccceEccCCCCCCC--
Confidence 24444444444544444332 2222222111 122 2333322 2222 236888878888887644 222111
Q ss_pred HHhCCCCCceEEEEecCcccccccccccCCCCCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcC-----Ccccc
Q 011842 261 EESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSS-----NVEYL 335 (476)
Q Consensus 261 ~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~-----~~~yl 335 (476)
+ . .+++|...+.+..+ +++. ..|.|+++.+|.+| |-|.+++++|+.+++.... .-.|.
T Consensus 170 -~--~-----~~v~D~SS~ilsr~-------iDvs-k~dviyagaQKnlG-paGltvvIvr~~~l~r~~~~~~P~if~y~ 232 (365)
T COG1932 170 -D--G-----LLVADASSAILSRP-------IDVS-KYDVIYAGAQKNLG-PAGLTVVIVRPDLLERAESYTLPSIFDYL 232 (365)
T ss_pred -C--c-----eEEEecccHHhcCC-------CChh-HcceEEEehhhccC-ccceEEEEEcHHHHhcccccCCchHhhch
Confidence 1 3 79999886655444 5553 37999999999999 7889999999997765532 12232
Q ss_pred CCCC-CcccCCCCChhHHHHHHHHHHh-ChhcHHHHHHHHHHHHHHHHHHHHhcCCeEee-cCC---eeEEEEecCCc--
Q 011842 336 ASRD-ATIMGSRNGHAPIFLWYTLNRK-GYKGFQKEVQKCLRNAHYLKDRLLDAGISAML-NEL---SSTVVFERPQD-- 407 (476)
Q Consensus 336 ~~~~-~~~~~sr~~~~~l~~~~~l~~~-g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~-~~~---~~iv~f~~~~~-- 407 (476)
...+ .+...|++-++....-..++.+ ..-|++.+.++..+.++.|++.+.+.++.... .+. ...|+|...++
T Consensus 233 ~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s~fy~~~v~~~~RS~mnV~f~~~~~~l 312 (365)
T COG1932 233 THADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKSDFYRNLVAKANRSRMNVTFTLVDAEL 312 (365)
T ss_pred hhhccCCccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCccccccchhhccceeEEEEcCcHHH
Confidence 2111 1223344322222222344544 34579999999999999999999998875432 121 24577776542
Q ss_pred -HHHhh-----ceeec---ccCCEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Q 011842 408 -EEFVR-----RWQLA---CQGNIAHVVVMPNVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 408 -~~~~~-----~~~l~---~~~~~lRv~~~~~~T~edid~~~~~l~~~~~~ 449 (476)
..|.. ++..- ...+.+|+++-.....|+++.|++-|++..++
T Consensus 313 d~~fv~eae~~gl~~lkGhr~vgGmRasiynA~~~e~veaL~~fm~~f~~~ 363 (365)
T COG1932 313 DKGFVAEAEAAGLIYLKGHRSVGGLRASIYNAVPLEDVEALTDFMDWFEET 363 (365)
T ss_pred HHHHHHHHHHcCCceeccccCCCceeeeeecCCCHHHHHHHHHHHHHHHHh
Confidence 12221 11111 11244999999999999999999999877554
No 381
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=98.90 E-value=1.7e-06 Score=95.80 Aligned_cols=211 Identities=10% Similarity=0.042 Sum_probs=116.4
Q ss_pred HHHHHHHHc-----CCCCcEEEEEeeC-CCccccccC----HHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCC
Q 011842 222 ADFKAKLLQ-----NKDKPAIINVNIG-TTVKGAVDD----LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPK 291 (476)
Q Consensus 222 ~~Le~~l~~-----~~~~p~~vv~t~g-tt~tG~id~----l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~ 291 (476)
+.+++.|++ ..+....|++.-. ...-|.+.| +++|.++|++||+ +++.|+++.|+.--+......
T Consensus 567 ~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gi-----lLI~DEV~TGfGRtG~~fa~e 641 (817)
T PLN02974 567 SYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKI-----PVIFDEVFTGLWRLGVESAWE 641 (817)
T ss_pred HHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCC-----EEEEeecccCCCcccchhhHH
Confidence 567777763 2334455555432 344466543 8999999999999 999999997763211110000
Q ss_pred CCCcccccEEEEcCCCCCCCC-CCceeEEeehhhhhhhcCCc---cccCCCCCcccCCCCChhHHHHHHH---HHHhChh
Q 011842 292 VSFKKPIGSVSVSGHKFVGCP-MPCGVQITRMEHINVLSSNV---EYLASRDATIMGSRNGHAPIFLWYT---LNRKGYK 364 (476)
Q Consensus 292 ~~~~~~~Dsi~~s~hK~l~~p-~~~G~l~~~~~~~~~l~~~~---~yl~~~~~~~~~sr~~~~~l~~~~~---l~~~g~~ 364 (476)
..+ -..|++++. |.++.+ .++|+++++++..+.+.... .++. ..|+.+. +++..++ |+.+..+
T Consensus 642 ~~g-v~PDIi~~g--KgLtgG~~Plaa~l~~~~I~~~f~~~~~~~~~~h--g~Ty~gn-----pl~cAaala~L~~~~~~ 711 (817)
T PLN02974 642 LLG-CKPDIACYA--KLLTGGLVPLAATLATEEVFEAFRGPSKLDALLH--GHSYTAH-----PMGCAAAAKALQWYKDP 711 (817)
T ss_pred hcC-CCCCEEeec--ccccCCCCccEEEEEcHHHHHhhccccccCCccc--CCCCCcC-----HHHHHHHHHHHHHHHcc
Confidence 111 126888877 999988 48999999999877663210 1111 1222222 3444444 4444332
Q ss_pred c-HHHHHHHHHHHHHHHHHHH----HhcCCeEeecCCeeEEE--EecCCc---------HHH----h--hceeecccCCE
Q 011842 365 G-FQKEVQKCLRNAHYLKDRL----LDAGISAMLNELSSTVV--FERPQD---------EEF----V--RRWQLACQGNI 422 (476)
Q Consensus 365 g-~~~~~~~~~~~a~~l~~~L----~~~g~~~~~~~~~~iv~--f~~~~~---------~~~----~--~~~~l~~~~~~ 422 (476)
+ +++..++..++..++.+.| ++.+...-+.....+.. |..+.. ..+ . +++.+...++.
T Consensus 712 ~~~~~l~~~~~~l~~~l~~~l~~~l~~~p~V~~VRg~Gl~~~iel~~~~~~~~~~~~~a~~v~~~~~~~~Gl~~r~~Gnv 791 (817)
T PLN02974 712 STNPNLIPPGSRLRELWDEELVRAISSLPNVERVVSLGTVLALELDAEGSGSGYSSLYARSVVRRLRREDGIYARPLGNV 791 (817)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEEeeeeEEEEEEecCCcccccchHHHHHHHHHHHHhCCEEEEecCCE
Confidence 2 2344455555555555555 33332111111112222 222110 011 1 23333334678
Q ss_pred EEEEEcCCCCHHHHHHHHHHHHHHH
Q 011842 423 AHVVVMPNVTIDKLDDFLNELIENR 447 (476)
Q Consensus 423 lRv~~~~~~T~edid~~~~~l~~~~ 447 (476)
+++...+.+++++++.+++.|.+.+
T Consensus 792 i~l~pP~~i~~e~l~~~~~~l~~~~ 816 (817)
T PLN02974 792 VYLMCGPTTSPETCTRLLRKVYRRL 816 (817)
T ss_pred EEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 8888888999999999999997653
No 382
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=98.86 E-value=4.9e-07 Score=88.69 Aligned_cols=238 Identities=13% Similarity=0.115 Sum_probs=134.5
Q ss_pred HHHHHHHHHHHcCCCCCcccEEE---cCCchhHHHHHHHHHHhhCCCcEEEe-cCCCchHHHHHH----------HHcCC
Q 011842 141 EVGVLDWFARLWELENNEYWGYI---TNCGTEGNLHGILVGREVFPDGILYA-SRESHYSVFKAA----------RMYRM 206 (476)
Q Consensus 141 e~~~~~~la~l~g~~~~~~~g~~---t~ggt~An~~al~aa~~~~p~~~Vl~-s~~~H~S~~~~~----------~~~G~ 206 (476)
++.+.+-+|+.||.+. .++ ..+||.|+-+++...++ |||+++. +-.-|..+.+.. +-+|+
T Consensus 56 Rd~le~iyA~vfgaE~----ALVRpq~vSGTHAi~~~Lfg~Lr--pGD~ll~~tG~PYDTL~~VIG~~g~~~GSL~e~Gi 129 (403)
T PF06838_consen 56 RDKLERIYADVFGAED----ALVRPQFVSGTHAIALALFGVLR--PGDELLSITGKPYDTLEEVIGIRGNGPGSLKEFGI 129 (403)
T ss_dssp HHHHHHHHHHHCT-SE----EEEETTS-SHHHHHHHHHHHH----TT-EEEESSSS--CCHHHHHTSSSSSSSSTGGGT-
T ss_pred HHHHHHHHHHHhCchh----hhhcccccchHHHHHHHHHhcCC--CCCeEEEcCCCchhhHHHHhCCCCCCCCChHHhCc
Confidence 4445566899999974 444 34999999999998876 9998774 444455555544 33477
Q ss_pred eEEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEee--CCC--ccccccCHHHHHHHHHHhCCCCCceEEEEecCccccc
Q 011842 207 ECVKVDCLISGEIDCADFKAKLLQNKDKPAIINVNI--GTT--VKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLM 282 (476)
Q Consensus 207 ~v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~--gtt--~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~ 282 (476)
+...|++.++|.+|.+.++++|.++++ +|.+.- |.+ +.=.++.|+++++++|+.+- +.++.||-+||-++
T Consensus 130 ~Y~~v~L~~dg~~D~~~i~~~~~~~tk---~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p---~~iifVDNCYGEFv 203 (403)
T PF06838_consen 130 KYREVPLTEDGTIDWEAIKKALKPNTK---MVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINP---DVIIFVDNCYGEFV 203 (403)
T ss_dssp EEEE--B-TTSSB-HHHHHHHHHTTEE---EEEEE-S-TTSSS----HHHHHHHHHHHHHH-T---TSEEEEE-TTTTTT
T ss_pred eeEEEeecCCCCcCHHHHHHhhccCce---EEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCC---CeEEEEeCCcceec
Confidence 889999999999999999999997775 666653 322 23345778888888887642 44999999998765
Q ss_pred ccccccCCCCCCcccccEEEEcCCCCCCCC--CCceeEEeehhhhhhhcC--CccccCCCCCcccCCCCC-hhHHHHHHH
Q 011842 283 MPFVKKAPKVSFKKPIGSVSVSGHKFVGCP--MPCGVQITRMEHINVLSS--NVEYLASRDATIMGSRNG-HAPIFLWYT 357 (476)
Q Consensus 283 ~~~~~~~~~~~~~~~~Dsi~~s~hK~l~~p--~~~G~l~~~~~~~~~l~~--~~~yl~~~~~~~~~sr~~-~~~l~~~~~ 357 (476)
-.... . .-++|.+..|.=|..+++ +..|++..|.++++.... ..+=+... .|...+ ...+.+-.-
T Consensus 204 E~~EP----~--~vGADl~aGSLIKNpGGgiAptGGYIaGr~~lVe~~a~RLTaPGiG~e----~G~t~~~~R~~~QGlF 273 (403)
T PF06838_consen 204 ETQEP----T--EVGADLMAGSLIKNPGGGIAPTGGYIAGRKDLVERAAYRLTAPGIGKE----VGATLGTNRLMFQGLF 273 (403)
T ss_dssp SSS-G----G--GGT-SEEEEETTSGGGTTT-SS-EEEEESHHHHHHHHHHHS-TTTGGG----SS--TTTHHHHHHHHH
T ss_pred cccCc----c--ccchhheeccceeCCCCCccCcCCEEechHHHHHHHHhhhcCCccccc----cccCcchHHHHHhHHh
Confidence 43111 1 124999999999987654 346777778777764321 11111111 111111 111221111
Q ss_pred HHHhChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCC----eeEEEEecCCc
Q 011842 358 LNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNEL----SSTVVFERPQD 407 (476)
Q Consensus 358 l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~----~~iv~f~~~~~ 407 (476)
+ -+..+.+...-+.+....+++.|+.+...+. ..|-.+.....
T Consensus 274 l-------AP~vV~eAlKgaif~A~~fe~lG~~v~P~~~~~R~DiIQai~l~~~ 320 (403)
T PF06838_consen 274 L-------APHVVGEALKGAIFAAALFEKLGFEVSPKPDDPRSDIIQAIELGSP 320 (403)
T ss_dssp H-------HHHHHHHHHHHHHHHHHHHHHTT-EEES-TTS--SSS-EEEE-SSH
T ss_pred h-------chHHHHHHHHHHHHHHHHHHHcCCcCCCCCCCCCCceEEEEECCCH
Confidence 1 1456666677777777778889987654322 24445555443
No 383
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=98.75 E-value=1.1e-08 Score=101.28 Aligned_cols=169 Identities=17% Similarity=0.191 Sum_probs=44.5
Q ss_pred HHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCch------HHHHHHHHcCCeEEEEeCCCC
Q 011842 143 GVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHY------SVFKAARMYRMECVKVDCLIS 216 (476)
Q Consensus 143 ~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~------S~~~~~~~~G~~v~~v~~~~~ 216 (476)
.+.+.++.+.|.+. .+++++...|+++++.+.. ++.+|++|+-.-. -+....+..|++++.|-+.
T Consensus 51 ~v~~ll~~ltgAea----A~VvNnnaAAv~L~l~~la---~~~EvIvsRGelVeiGgsFRip~vm~~sGa~lvEVGtt-- 121 (367)
T PF03841_consen 51 HVEELLCELTGAEA----ALVVNNNAAAVLLALNTLA---KGKEVIVSRGELVEIGGSFRIPDVMRQSGARLVEVGTT-- 121 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccc----ccccccccccccccccccc---cccccccccccccccccccccccccccccccccccccc--
Confidence 35566888999874 7888888888888776543 4557777765432 2456667778888888754
Q ss_pred CccCHHHHHHHHHcCCCCcEEEEEeeCCCc--cccc--cCHHHHHHHHHHhCCCCCceEEEEecCcccccccc----ccc
Q 011842 217 GEIDCADFKAKLLQNKDKPAIINVNIGTTV--KGAV--DDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPF----VKK 288 (476)
Q Consensus 217 g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~--tG~i--d~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~----~~~ 288 (476)
.+-.+++++++|.++|. ++.-.+.++. .|.. -+++++++++++|++ ++++|.+.|... +. ..+
T Consensus 122 N~t~~~Dye~AI~e~Ta---~ll~Vh~Sn~~i~GFt~~~~~~el~~la~~~~l-----p~i~DlgsG~l~-dl~~~gl~~ 192 (367)
T PF03841_consen 122 NRTHLSDYEKAITENTA---ALLKVHTSNFRIQGFTGEVSLEELAELAKEHGL-----PVIVDLGSGLLV-DLSPYGLPD 192 (367)
T ss_dssp ------------------------------------------HHHHHHHHHT-------EEEE-TTHHHH-HHHTT----
T ss_pred ccccccccccccccccc---ccccccccccccccccccccHHHHHHHHhhcCC-----cEEEECCCCCCc-CcccccCcc
Confidence 34567889999999886 3333333333 3433 379999999999999 999998864432 11 111
Q ss_pred CC-CCCCc-ccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcC
Q 011842 289 AP-KVSFK-KPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSS 330 (476)
Q Consensus 289 ~~-~~~~~-~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~ 330 (476)
.+ ..... .++|.+++|+.|.+++|. +|+++.|.++++.+..
T Consensus 193 Ep~v~~~~~~GaDlV~fSGdKlLGGPQ-aGiI~Gkk~lI~~lk~ 235 (367)
T PF03841_consen 193 EPTVQEYLAAGADLVTFSGDKLLGGPQ-AGIIVGKKELIEKLKK 235 (367)
T ss_dssp ------CCCCT-SEEEEETTSSSSS-S--EEEEEEHHHHHHHHH
T ss_pred ccHHHHHhhcCCCEEEEECCCcCCCCC-eEEEEeCHHHHHHHhh
Confidence 11 12223 359999999999999766 7999999999877654
No 384
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=98.73 E-value=2.5e-06 Score=83.03 Aligned_cols=288 Identities=15% Similarity=0.144 Sum_probs=168.6
Q ss_pred HHHHHHHcCCCCCcccEEEcCCchhH--HHHHHHH-HHhhCCCcEEEecCCCchHHHH-HHHHcCCeEEEEeCCC-----
Q 011842 145 LDWFARLWELENNEYWGYITNCGTEG--NLHGILV-GREVFPDGILYASRESHYSVFK-AARMYRMECVKVDCLI----- 215 (476)
Q Consensus 145 ~~~la~l~g~~~~~~~g~~t~ggt~A--n~~al~a-a~~~~p~~~Vl~s~~~H~S~~~-~~~~~G~~v~~v~~~~----- 215 (476)
.+.+.+.+|++. .+-|.-|-.| ++..+.. .+++-|+.+.++.+..|+--.. -....|..++.+++++
T Consensus 85 ~~avkdifGfq~----~iPthQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~FdTTr~h~~~ng~~~~n~~~~ea~d~~ 160 (471)
T COG3033 85 ADAVKDIFGFQY----TIPTHQGRGAENILIPILIKKGEQEPGSKMVAFSNYHFDTTRGHIQINGATPRNVYVDEAFDTE 160 (471)
T ss_pred HHHHHHhcCcee----eeeccCCccHHHHHHHHHhhhccccCCccccccccceecchhHHHHhcCCcccccccccccccc
Confidence 344556678764 4556555444 4433322 2334577777777777765433 3455677777666542
Q ss_pred -----CCccCHHHHHHHHHcCC--CCcEEEEEeeCCCcccc---ccCHHHHHHHHHHhCCCCCceEEEEecCccc---cc
Q 011842 216 -----SGEIDCADFKAKLLQNK--DKPAIINVNIGTTVKGA---VDDLDLVIQTLEESGFTQDRFYIHCDGALFG---LM 282 (476)
Q Consensus 216 -----~g~~D~~~Le~~l~~~~--~~p~~vv~t~gtt~tG~---id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g---~~ 282 (476)
.|.+|++.|++.|++.+ ..|.++.....++.-|. +++++++.+||++|++ .++.|++-.+ .+
T Consensus 161 ~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~i-----pvv~Da~RfaENaYF 235 (471)
T COG3033 161 VKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDI-----PVVMDAARFAENAYF 235 (471)
T ss_pred ccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCC-----cEEeehhhhhhhhhh
Confidence 37899999999998864 35655544445555554 4789999999999999 9999999532 11
Q ss_pred ccc-cccCCCCCC-------cccccEEEEcCCCCCCCCCCceeEEeehhh----hhhh-cCCccccCCCCCcccCCCCCh
Q 011842 283 MPF-VKKAPKVSF-------KKPIGSVSVSGHKFVGCPMPCGVQITRMEH----INVL-SSNVEYLASRDATIMGSRNGH 349 (476)
Q Consensus 283 ~~~-~~~~~~~~~-------~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~----~~~l-~~~~~yl~~~~~~~~~sr~~~ 349 (476)
+.. ......++. ...+|-++.|.+|=..++. .|+++.+++- ...+ .....|- .-.+ .|+-.|.
T Consensus 236 Ik~rE~gYrd~sI~~IarEm~sYaD~~~mS~KKD~lvnm-GGfl~~~D~~~fDvy~~~~~~~V~~e--G~~t-YGgl~Gr 311 (471)
T COG3033 236 IKQREPGYRDWSIEEIAREMYSYADGCTMSAKKDGLVNM-GGFLCFKDDSFFDVYEECRTLVVVQE--GFPT-YGGLAGR 311 (471)
T ss_pred hhhcCcccccccHHHHHHHHHhhhhhheeeccccceecc-ccEEEecCccHHHHHHHHHhheEeec--cccc-cCcccch
Confidence 111 111111221 1238999999999888766 4888888872 1111 1111111 0111 1222222
Q ss_pred hHHHHHHHHHHhChhcH-HHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEec-------CCc----HHHh----h-
Q 011842 350 APIFLWYTLNRKGYKGF-QKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFER-------PQD----EEFV----R- 412 (476)
Q Consensus 350 ~~l~~~~~l~~~g~~g~-~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~-------~~~----~~~~----~- 412 (476)
..-++...|. ++. ...+++-.+-.+||.+.|.+.|+.++.+.+..-|++.. |.+ +.+. +
T Consensus 312 dmealAvGL~----e~~~~~yl~~Rv~Qv~YL~~~l~~~GVpi~~paGGHavfvda~~~lphip~eqFpaqala~ely~e 387 (471)
T COG3033 312 DMEALAVGLR----EGVNFDYLAHRVAQVQYLADGLEEAGVPIVQPAGGHAVFVDAGKFLPHIPAEQFPAQALACELYKE 387 (471)
T ss_pred hHHHHHHHHH----HhcCcHHHHHHHHHHHHHHHHHHhcCCeeEecCCCceEEeehhhhcCCCChhhCcHHHHHHHHHHH
Confidence 2222333332 221 34556666778899999999999877666655555432 211 1111 1
Q ss_pred -cee--------e----------cccCCEEEEEEcCCC-CHHHHHHHHHHHHHHHHH
Q 011842 413 -RWQ--------L----------ACQGNIAHVVVMPNV-TIDKLDDFLNELIENRST 449 (476)
Q Consensus 413 -~~~--------l----------~~~~~~lRv~~~~~~-T~edid~~~~~l~~~~~~ 449 (476)
+.+ + ++.-..+|+.+...+ |.+++|.++++++++.+.
T Consensus 388 ~GiRavElG~~~~~rd~ktg~q~~~~~elvRltipRrtYt~~HmD~V~~a~~~l~e~ 444 (471)
T COG3033 388 AGIRAVELGSFSLGRDPKTGKQHPPPAELVRLTIPRRTYTQTHMDFVIEAFKALKEN 444 (471)
T ss_pred hCeeeeeeeceecccCCCccccCCCchheeeEeccccccchhHHHHHHHHHHHHHhc
Confidence 111 1 122367899876554 999999999999877553
No 385
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=98.70 E-value=3.4e-06 Score=80.48 Aligned_cols=294 Identities=16% Similarity=0.152 Sum_probs=184.2
Q ss_pred HHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCC---CcEEEecC----CCchHHHHHHHHcCCe----EE
Q 011842 141 EVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFP---DGILYASR----ESHYSVFKAARMYRME----CV 209 (476)
Q Consensus 141 e~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p---~~~Vl~s~----~~H~S~~~~~~~~G~~----v~ 209 (476)
.+-+...++++.|....+ + ...++-..|+..++..-. .| .-.|+... ..||.+..-+++-|+. .+
T Consensus 113 De~il~l~~~iVGA~e~E--v-avmNsLTvNlh~Ll~sFy-KPTekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~ 188 (465)
T KOG3846|consen 113 DEPILPLLAPIVGAQENE--V-AVMNSLTVNLHSLLISFY-KPTEKRFKILLEKKAFPSDHYAIESQCKLHGISPENSMI 188 (465)
T ss_pred chhhhhhhhhhccCCchh--h-hhHhhhhhHHHHHHHHhc-CCcchhhhhhhccCCCCchHHHHHhhhhhcCCChHHheE
Confidence 345667788899987543 3 334555667666655432 12 12344332 3688899999999985 34
Q ss_pred EEeCCC-CCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCccccccccccc
Q 011842 210 KVDCLI-SGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKK 288 (476)
Q Consensus 210 ~v~~~~-~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~ 288 (476)
.+...+ ...+..+++-+.|+++++...+|..+-...+||...++.+|...-+..|+ ++-.|=||+.+-.|.
T Consensus 189 ~iePREGEetlRteDILd~IEkngDeiA~v~fSGvqyYTGQ~Fdi~aIT~Agq~kgc-----~VGfDLAHAvgNVpL--- 260 (465)
T KOG3846|consen 189 QIEPREGEETLRTEDILDTIEKNGDEIALVCFSGVQYYTGQYFDIGAITFAGQFKGC-----LVGFDLAHAVGNVPL--- 260 (465)
T ss_pred EecccccccchhHHHHHHHHHhcCCeEEEEEeecceeecccccchhhhhhcccCCCc-----EechhhhhhhcCCce---
Confidence 444332 23578899999999998877778787779999999999999977777888 999999998665552
Q ss_pred CCCCCCcc-cccEEEEcCCCCCCC-CCCceeEEeehhhhhh-hcCCccccCC-------------CCCcccCCCC----C
Q 011842 289 APKVSFKK-PIGSVSVSGHKFVGC-PMPCGVQITRMEHINV-LSSNVEYLAS-------------RDATIMGSRN----G 348 (476)
Q Consensus 289 ~~~~~~~~-~~Dsi~~s~hK~l~~-p~~~G~l~~~~~~~~~-l~~~~~yl~~-------------~~~~~~~sr~----~ 348 (476)
..-. ++|+-++.+.|++.+ +.++|.+++..++... .+....|... -.....|-|- .
T Consensus 261 ----~LHdWgVDFACWCSYKYlnaGaGgIgGlFvHekh~~~~~prl~GWwgh~~s~RF~Mdnvl~lipGa~GfRiSNPpi 336 (465)
T KOG3846|consen 261 ----QLHDWGVDFACWCSYKYLNAGAGGIGGLFVHEKHTKESLPRLAGWWGHDPSKRFQMDNVLELIPGALGFRISNPPI 336 (465)
T ss_pred ----EEeecCCceEEEeeecccccCCCccceeeeehhhhcchhhHHhhhccCCcchhhhhccccccCccccccccCCCcH
Confidence 2222 389999999999975 4567888887765321 1111112111 0111122222 1
Q ss_pred hhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhc-CCe----------EeecCCe-------eEEEEecCCcHHH
Q 011842 349 HAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDA-GIS----------AMLNELS-------STVVFERPQDEEF 410 (476)
Q Consensus 349 ~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~-g~~----------~~~~~~~-------~iv~f~~~~~~~~ 410 (476)
....++..+++.+.+-.+.+...+..-++.|+...++.. |.. .+..|.+ ..+.|..|.+..+
T Consensus 337 ~~v~al~~SLe~F~q~~~~~lRkrS~lLTgYleyL~k~~~g~~~~~rt~Kl~~~IiTP~~~~erGcQLsl~Fssp~~~vf 416 (465)
T KOG3846|consen 337 IDVVALRSSLELFAQFNINELRKRSLLLTGYLEYLLKASKGYKHPLRTEKLFFTIITPTSTDERGCQLSLYFSSPTPKVF 416 (465)
T ss_pred hHHHHHHhhHHHHHHhhHHHHhhhhhhHHhHHHHHHHHhcccCchhhhcceeEEEeCCcccccccceEEEEeCCCchHHH
Confidence 223445566666666667888888888888887777653 211 1111110 1222333332211
Q ss_pred --hhceeec---ccCCEEEEE-EcCCCCHHHHHHHHHHHHHHHHHH
Q 011842 411 --VRRWQLA---CQGNIAHVV-VMPNVTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 411 --~~~~~l~---~~~~~lRv~-~~~~~T~edid~~~~~l~~~~~~~ 450 (476)
..+-.+. ...+.+|+. +.-++|..||-.|+++|.++...+
T Consensus 417 qeL~krGv~~DkR~PNvIRvAPvpLYN~f~Dvy~f~n~L~e~~d~~ 462 (465)
T KOG3846|consen 417 QELHKRGVIGDKRRPNVIRVAPVPLYNTFSDVYIFVNALNEAMDKL 462 (465)
T ss_pred HHHHHcCeeccccCCCceEeecchhhccHHHHHHHHHHHHHHHHHh
Confidence 1111122 235789987 567889999999999999987653
No 386
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=98.60 E-value=5.9e-05 Score=74.84 Aligned_cols=287 Identities=10% Similarity=0.053 Sum_probs=149.6
Q ss_pred HHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHH--HHhh----------CCCcEEEecCCCchHHHHHHHHcCCeEEE
Q 011842 143 GVLDWFARLWELENNEYWGYITNCGTEGNLHGILV--GREV----------FPDGILYASRESHYSVFKAARMYRMECVK 210 (476)
Q Consensus 143 ~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~a--a~~~----------~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~ 210 (476)
++++.+++++|++.++ .++-.++|..++.-+.+ ...- .+.-..+|+.+.|.-....++.+|++.+.
T Consensus 73 e~r~l~a~llgv~~~~--viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHFai~E~~Giemi~ 150 (425)
T PF12897_consen 73 EARELFAELLGVPPEN--VIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRHFAITEHFGIEMIP 150 (425)
T ss_dssp HHHHHHHHHHTS-GGG--EEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHHHHHHHHCT-EEEE
T ss_pred HHHHHHHHHhCCCHHH--EEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHHHHHHHhhCcEEEe
Confidence 5677899999998754 77766666666543222 1110 13457999999999999999999999999
Q ss_pred EeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHH-HHhCCCCCceEEEEecCcccccc-cc
Q 011842 211 VDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTL-EESGFTQDRFYIHCDGALFGLMM-PF 285 (476)
Q Consensus 211 v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia-~~~g~~~~~~~lhvD~a~~g~~~-~~ 285 (476)
||.+++| -|+|.+|+.+.++...--+-++-.-+|++|..-. +++++.+- ...++ .|.=|.||+...+ ..
T Consensus 151 VpM~~dG-PDmD~Ve~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DF-----RI~WDNAY~vHhL~~~ 224 (425)
T PF12897_consen 151 VPMTEDG-PDMDMVEELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDF-----RIFWDNAYAVHHLYDE 224 (425)
T ss_dssp EEEETTE-E-HHHHHHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT------EEEEE-TTTT-BSSSS
T ss_pred cCCCCCC-CCHHHHHHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCe-----EEEeecCceEeecccc
Confidence 9998766 4999999999877543335555456899998854 44444431 23455 9999999986654 22
Q ss_pred cccCCCCCC--------cccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHH
Q 011842 286 VKKAPKVSF--------KKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYT 357 (476)
Q Consensus 286 ~~~~~~~~~--------~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~ 357 (476)
......++. ...--....|..|--..+.|++++..+.+-++.+.....+. ++ +..-+.|..-
T Consensus 225 ~~~~~~~nil~~~~~AGnpdrv~~F~STSKITf~GaGva~~aaS~~Nl~~~~~~~~~~-----tI-----gpdKvNQLRH 294 (425)
T PF12897_consen 225 EPRDALLNILDACAKAGNPDRVYVFASTSKITFPGAGVAFFAASEANLAWIKKHLSVQ-----TI-----GPDKVNQLRH 294 (425)
T ss_dssp SS------HHHHHHHTT-TTSEEEEEESTTTS-TTSS-EEEEE-HHHHHHHHHHHHHH------S--------HHHHHHH
T ss_pred ccchhhhHHHHHHHHcCCCCeEEEEecccccccCCcceeeeecCHHHHHHHHHHhcCc-----ee-----CccHHHHHHH
Confidence 111111111 11123455667787777899999999887544332211110 00 1112334444
Q ss_pred HHHhC-hh-cHHHHHHHHHH--------HHHHHHHHHH-hcCCeEeecCC-eeEEEEecCCc--HH---Hhhc--eee--
Q 011842 358 LNRKG-YK-GFQKEVQKCLR--------NAHYLKDRLL-DAGISAMLNEL-SSTVVFERPQD--EE---FVRR--WQL-- 416 (476)
Q Consensus 358 l~~~g-~~-g~~~~~~~~~~--------~a~~l~~~L~-~~g~~~~~~~~-~~iv~f~~~~~--~~---~~~~--~~l-- 416 (476)
.+.++ .+ |+++++++..+ .-+.|.+.|. ..++-.+..|. ...|.|...+. .. +.+. ..+
T Consensus 295 vrff~d~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~GGYFIsld~~~G~AkrvV~lakeAGV~LT~ 374 (425)
T PF12897_consen 295 VRFFKDAEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTKPKGGYFISLDVLDGTAKRVVELAKEAGVALTP 374 (425)
T ss_dssp HHHHHSHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE---SBSS-EEEEESTT-HHHHHHHHHHTTEE---
T ss_pred HHHhcChhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCCCceEEEEecCCChHHHHHHHHHHhCceeCC
Confidence 44443 34 66666665544 3344555666 55666665554 45677776542 22 2222 222
Q ss_pred -----c----ccCCEEEEEEcCCCCHHHHHHHHHHHHHHHH
Q 011842 417 -----A----CQGNIAHVVVMPNVTIDKLDDFLNELIENRS 448 (476)
Q Consensus 417 -----~----~~~~~lRv~~~~~~T~edid~~~~~l~~~~~ 448 (476)
| .....+|+..+ .-+.||++...+.+.-+.+
T Consensus 375 AGAtfPyg~DP~D~nIRiAPS-~P~leel~~Am~~~~~cv~ 414 (425)
T PF12897_consen 375 AGATFPYGKDPRDSNIRIAPS-YPSLEELETAMDVFATCVK 414 (425)
T ss_dssp TTTTSGGG--TTS-EEEE--S-SS-HHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCcEEecCC-CCCHHHHHHHHHHHHHHHH
Confidence 1 12356887654 2478999988888866654
No 387
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=98.52 E-value=3.8e-07 Score=85.09 Aligned_cols=228 Identities=14% Similarity=0.031 Sum_probs=147.1
Q ss_pred HHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCc-EEEecCCCchHHHHHHHHcCCeEEEEeCCCC---C
Q 011842 142 VGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDG-ILYASRESHYSVFKAARMYRMECVKVDCLIS---G 217 (476)
Q Consensus 142 ~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~-~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~---g 217 (476)
.+.....-+|.|+..-....++.-...++..+.+...|.++|+. -|+..+...-|..|..--.|.+.+.|..--+ -
T Consensus 60 ne~a~~~i~l~glhav~nc~vvpl~tgmslslc~~s~r~krpkakyiiw~ridqks~~ksi~~agfepiiie~i~d~d~l 139 (432)
T KOG3843|consen 60 NEFAKDAIHLAGLHAVANCFVVPLATGMSLSLCFLSLRHKRPKAKYIIWLRIDQKSCFKSIIHAGFEPIIIENILDGDEL 139 (432)
T ss_pred HHHHHHHHHHhhhhhhhceeEEeccccccHHHHHHHHhhcCCcccEEEEEecchHHHHHHHHhcCCCceeeeccccchHH
Confidence 34444455677776432233333344566667777888777765 4777788888888888888998777754222 3
Q ss_pred ccCHHHHHHHHHcCCCCcEEEEEeeCCCccc---cccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCC
Q 011842 218 EIDCADFKAKLLQNKDKPAIINVNIGTTVKG---AVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSF 294 (476)
Q Consensus 218 ~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG---~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~ 294 (476)
.-|++.+++.+++.+.. .+...+.||..- .-|.+++|+.||..|++ .-+|..|||.-.-..........-
T Consensus 140 ~tdleav~~~iee~g~d--cilci~sttscfapr~pd~leaiaaica~~di-----phivnnayglqsee~i~~iaa~~~ 212 (432)
T KOG3843|consen 140 ITDLEAVEAIIEELGED--CILCIHSTTSCFAPRSPDNLEAIAAICAAHDI-----PHIVNNAYGLQSEECIHKIAAAAE 212 (432)
T ss_pred HHhHHHHHHHHHHhCCc--eEEEEeecccccCCCCCchHHHHHHHHHccCc-----hhhhccccccchHHHHHHHHHHhh
Confidence 46899999999887542 222323333322 34789999999999999 889999987532211111100111
Q ss_pred cccccEEEEcCCCCCCCCCCceeEEe-ehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHH
Q 011842 295 KKPIGSVSVSGHKFVGCPMPCGVQIT-RMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKC 373 (476)
Q Consensus 295 ~~~~Dsi~~s~hK~l~~p~~~G~l~~-~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~ 373 (476)
..++|.++-|..|.+++|.|..++.. ++.+++.+.. .| .|..+..+++.+...+-++|+.++.+...+.
T Consensus 213 ~grida~vqsldknf~vpvggaiia~fk~n~iq~iak--~y--------pgrasa~ps~dllitll~~gqn~f~e~~~eq 282 (432)
T KOG3843|consen 213 CGRIDAFVQSLDKNFMVPVGGAIIAAFKDNFIQEIAK--MY--------PGRASASPSLDLLITLLSLGQNAFKELFGEQ 282 (432)
T ss_pred hccHHHHHHHhhhcceeecchhHhhHhHHHHHHHHHH--hC--------CCccccCccHHHHHHHHHhchhHHHHHHHHH
Confidence 22489999999999999988666553 3445444321 23 2323334467777788888999998888877
Q ss_pred HHHHHHHHHHHHh
Q 011842 374 LRNAHYLKDRLLD 386 (476)
Q Consensus 374 ~~~a~~l~~~L~~ 386 (476)
.++--+++.++.+
T Consensus 283 kemf~~l~~ki~~ 295 (432)
T KOG3843|consen 283 KEMFLKLRNKIIK 295 (432)
T ss_pred HHHHHHHHHHHHH
Confidence 7777777666654
No 388
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=98.28 E-value=0.00013 Score=69.22 Aligned_cols=315 Identities=14% Similarity=0.102 Sum_probs=186.9
Q ss_pred hHHHHHHHHHhhCCCCC---CcccCccchhhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHH----hhC
Q 011842 110 YGALAQLQHFSINNLGD---PFIESNYGVHSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGR----EVF 182 (476)
Q Consensus 110 ~~~l~~~l~~~~n~~g~---~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~----~~~ 182 (476)
.+.+.++....+|-.|. ..+.|+.+.....+.......+.+|++++. ++.++|..||...-+.|+..-+ .-.
T Consensus 20 ~~VL~e~qkdl~n~~g~GisV~EmSHRsk~f~kii~~tes~lreLlniPd-n~~vlf~QGGGt~qFaAv~lNL~glK~g~ 98 (370)
T KOG2790|consen 20 ESVLLEAQKDLLNFNGSGISVMEMSHRSKDFAKIINDTESLLRELLNIPD-NYKVLFLQGGGTGQFAAVPLNLIGLKHGR 98 (370)
T ss_pred HHHHHHHHHHhhccCCCcceEEEecccchhHHHHHHHHHHHHHHHHcCCC-ceeEEEEeCCCcccccccchhhhccccCC
Confidence 34555555555442222 234455555567888888999999999995 5778888877666665543311 111
Q ss_pred CCcEEEecCCCchHHHHHHHHcCCeEEEEeCCC--CCc-cCHHHHHHHHHcCCCCcEEEEEeeCCCccccc-cCHHHHHH
Q 011842 183 PDGILYASRESHYSVFKAARMYRMECVKVDCLI--SGE-IDCADFKAKLLQNKDKPAIINVNIGTTVKGAV-DDLDLVIQ 258 (476)
Q Consensus 183 p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~--~g~-~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~i-d~l~~I~~ 258 (476)
+-+-|++...+--+..++-++--...+..+..+ -|. -|.+.++. .++.. +|-.....|..|.- +++.
T Consensus 99 ~AdYiVTGsWS~KA~~EAkk~~~~~~V~~~~k~y~ygkvPd~~~w~~--~~da~---yvyyCaNETVHGVEf~~~P---- 169 (370)
T KOG2790|consen 99 CADYVVTGSWSAKAAEEAKKYGTPNIVIPKLKSYTYGKVPDPSTWEL--NPDAS---YVYYCANETVHGVEFDFIP---- 169 (370)
T ss_pred ccceEEeccccHHHHHHHHhhCCceEEeccccccccCcCCChhhccc--CCCcc---EEEEecCceeeceecCCCC----
Confidence 345677776666666666554333343333321 122 24444332 22222 67776777777764 2222
Q ss_pred HHHHhCCCCCceEEEEecCcccccccccccCCCCCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhh-cCCc---cc
Q 011842 259 TLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVL-SSNV---EY 334 (476)
Q Consensus 259 ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l-~~~~---~y 334 (476)
+-.-+|. .+++|-......-| +|+.. .+.|.....|..+ |+|..++++|+.++... ...+ +|
T Consensus 170 ~~~~~~~-----vlVaDmSSnflSrp-------vDvsk-~gvi~aGAQKN~G-~aG~Tvvivr~dllg~~~~~tP~v~dy 235 (370)
T KOG2790|consen 170 VNDPKGA-----VLVADMSSNFLSRP-------VDVSK-FGVIFAGAQKNVG-PAGVTVVIVRKDLLGNALDITPSVLDY 235 (370)
T ss_pred CCCCCCc-----eEEEecccchhcCC-------ccchh-cceEEeccccccC-ccccEEEEEehhhhcccccCCccccce
Confidence 1223566 78899764322222 55543 5778889999998 89999999999875322 2222 23
Q ss_pred cCC-CCCcccCCCCChhHHHHHHHHHHhCh-hcHHHHHHHHHHHHHHHHHHHHhc-CCeEeec-CC---eeEEEEecCCc
Q 011842 335 LAS-RDATIMGSRNGHAPIFLWYTLNRKGY-KGFQKEVQKCLRNAHYLKDRLLDA-GISAMLN-EL---SSTVVFERPQD 407 (476)
Q Consensus 335 l~~-~~~~~~~sr~~~~~l~~~~~l~~~g~-~g~~~~~~~~~~~a~~l~~~L~~~-g~~~~~~-~~---~~iv~f~~~~~ 407 (476)
-.. ...++..+.+.+.....-..++++-. -|+.++.+...+.++.+++.|.+. |+..+.- +. -..|+|+..++
T Consensus 236 k~~~~NnSlyNTpP~f~iy~~~Lv~~~il~~GGl~a~e~~n~~KskllYd~iD~s~gfy~cpVe~~~RS~MNV~Fri~~d 315 (370)
T KOG2790|consen 236 KIMDKNNSLYNTPPCFGIYVMGLVFEWILEKGGLAAMEKLNQEKSKLLYDAIDNSNGFYRCPVEPSVRSRMNVPFRIEKD 315 (370)
T ss_pred eeeccccccccCCCeeeeeehhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCCeEEcccchhhhhhcccceeecch
Confidence 111 12345555555443333344555433 367888888888999999999886 6655432 21 25688988754
Q ss_pred ---HHHhhce----eecc----cCCEEEEEEcCCCCHHHHHHHHHHHHHHHH
Q 011842 408 ---EEFVRRW----QLAC----QGNIAHVVVMPNVTIDKLDDFLNELIENRS 448 (476)
Q Consensus 408 ---~~~~~~~----~l~~----~~~~lRv~~~~~~T~edid~~~~~l~~~~~ 448 (476)
.+|+++- .+.. +-+.+|.|+--..|.+++.++++-|++..+
T Consensus 316 ~Le~eFLkeA~~~~mv~LKGhRSVGGiRASlYNAisv~~~q~L~~~m~~F~k 367 (370)
T KOG2790|consen 316 ELEAEFLKEAAKEHMVQLKGHRSVGGIRASLYNAISVEEVQKLAAFMKEFQK 367 (370)
T ss_pred HHHHHHHHHHHHhhhhccccccccccchhhhhccccHHHHHHHHHHHHHHHH
Confidence 2332211 1121 225689888888899999999998877543
No 389
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=98.13 E-value=0.00011 Score=70.07 Aligned_cols=287 Identities=16% Similarity=0.135 Sum_probs=154.0
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhC-CCcEEEecCCCchHHHHHHHHc------C--C-e-
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVF-PDGILYASRESHYSVFKAARMY------R--M-E- 207 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~-p~~~Vl~s~~~H~S~~~~~~~~------G--~-~- 207 (476)
++-+-+....+.|-+++ ..+|+++|++||-+|++.+|+.. ..|+|..+...|.-+....++. | . +
T Consensus 87 ~lv~cA~~l~stlPeLs----vc~F~NSGSEANDLALRLAR~ftkhqDvItldHAYHGHl~s~mE~SPYKF~~g~~v~kp 162 (452)
T KOG1403|consen 87 ELVQCARTLTSTLPELS----VCFFVNSGSEANDLALRLARNFTKHQDVITLDHAYHGHLQSVMEVSPYKFNQGGGVAKP 162 (452)
T ss_pred HHHHHHHHHhhcCCCce----EEEEecCCchhhHHHHHHHHhhcccCceEEEechhccceeeeeeccceeccCCCCcCCC
Confidence 44444444445544543 48999999999999999999853 3566666554443332222222 1 1 1
Q ss_pred --EEEEeCCC--CC-------------ccCHHHHHHHHHcC---CCCcEEEEEeeCCCccccccC----HHHHHHHHHHh
Q 011842 208 --CVKVDCLI--SG-------------EIDCADFKAKLLQN---KDKPAIINVNIGTTVKGAVDD----LDLVIQTLEES 263 (476)
Q Consensus 208 --v~~v~~~~--~g-------------~~D~~~Le~~l~~~---~~~p~~vv~t~gtt~tG~id~----l~~I~~ia~~~ 263 (476)
+..-|+.. .| ..=.+.+++.+++. .......++.+-.+.-|.+-| ++.+++..+.+
T Consensus 163 d~VHVAPcPDvyrGK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~a 242 (452)
T KOG1403|consen 163 DYVHVAPCPDVYRGKFRDKMYPDADMGALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSA 242 (452)
T ss_pred ceeEecCCccccccccccccCCcccchhhhhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcC
Confidence 22223321 11 12224556655432 222223334344555676655 67888999999
Q ss_pred CCCCCceEEEEecCcccccccccccCCCCCCcc--c-ccEEEEcCCCCCCCCCCceeEEeehhhhhhhcC-CccccCCCC
Q 011842 264 GFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKK--P-IGSVSVSGHKFVGCPMPCGVQITRMEHINVLSS-NVEYLASRD 339 (476)
Q Consensus 264 g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~--~-~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~-~~~yl~~~~ 339 (476)
|- ..+.|+++-|+-- ..++. |.+.. - .|+++.. |-++-+.+.+.+.++.+..+++.. ...|+.
T Consensus 243 GG-----v~IaDEVQvGFGR-vG~hy--Wafq~y~fiPDIVtmg--KpmGNGhPVa~VattkeIA~Af~atgv~YFN--- 309 (452)
T KOG1403|consen 243 GG-----VCIADEVQVGFGR-VGSHY--WAFQTYNFIPDIVTMG--KPMGNGHPVAAVATTKEIAQAFHATGVEYFN--- 309 (452)
T ss_pred CC-----eEEeehhhhcccc-cchhh--hhhhhhccccchheec--ccCCCCCeeeEEeccHHHHHHhccccceehh---
Confidence 99 9999999865422 12222 33321 1 4666644 777778889999999998888854 567764
Q ss_pred CcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCC-eEeecCCeeEEEE-----------ecCCc
Q 011842 340 ATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGI-SAMLNELSSTVVF-----------ERPQD 407 (476)
Q Consensus 340 ~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~-~~~~~~~~~iv~f-----------~~~~~ 407 (476)
++.|++ ...++.+ +.++.... ++..++..+.-.+|...|+.... ..+......+-.| +.|+.
T Consensus 310 -TyGGnP-VsCAv~l-aVm~v~e~---E~Lq~ha~~vG~~L~~lL~~~k~kh~~IGDvRGvGLFiGIdLVkD~~tRtP~t 383 (452)
T KOG1403|consen 310 -TYGGNP-VSCAVGL-AVMRVCED---ENLQEHAQQVGEKLEVLLRRLKQKHECIGDVRGVGLFIGIDLVKDRKTRTPDT 383 (452)
T ss_pred -ccCCCc-hhHHHHH-HHHHHHhh---hhHHHHHHHHHHHHHHHHHHHhhhccceeccccceEEEeeeeecccccCCCcH
Confidence 333333 2222222 33333333 34445555566666666655321 1222222212111 12222
Q ss_pred HH---Hh------hceeeccc---CCEEEEEEcCCCCHHHHHHHHHHHHHHHH
Q 011842 408 EE---FV------RRWQLACQ---GNIAHVVVMPNVTIDKLDDFLNELIENRS 448 (476)
Q Consensus 408 ~~---~~------~~~~l~~~---~~~lRv~~~~~~T~edid~~~~~l~~~~~ 448 (476)
.+ .+ .+..++.. .+.+.+-.-.-.++++++.++..|.+++-
T Consensus 384 k~A~~~v~rlke~y~VLlsaDGPh~NilKiKPPmCFneena~e~v~~ld~iLT 436 (452)
T KOG1403|consen 384 KEAHWVVNRLKELYRVLLSADGPHRNILKIKPPMCFNEENADEFVLGLDEILT 436 (452)
T ss_pred HHHHHHHHHHHHhhhEEEecCCCCCceeecCCCcccChhhHHHHHHHHHHHHH
Confidence 11 11 11223333 36666554444578888888888888764
No 390
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=98.13 E-value=4.7e-05 Score=72.67 Aligned_cols=168 Identities=13% Similarity=0.099 Sum_probs=112.4
Q ss_pred HHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEe-cCCCchHHHHHH----------HHcCCeEEEEeCC
Q 011842 146 DWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYA-SRESHYSVFKAA----------RMYRMECVKVDCL 214 (476)
Q Consensus 146 ~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~-s~~~H~S~~~~~----------~~~G~~v~~v~~~ 214 (476)
+-+|+.+|.+..-..- -.-+||.|+-.|+...++ |+|+++. ...-|....... +-+|++.+.||+.
T Consensus 72 ~vyA~vf~aE~a~VRp-q~isGTHAI~~aLfg~LR--pgDell~i~G~PYDTLeevIG~rg~~~gSL~dfgi~Y~~v~Lt 148 (416)
T COG4100 72 RVYAQVFGAEAALVRP-QIISGTHAIACALFGILR--PGDELLYITGSPYDTLEEVIGLRGEGQGSLKDFGIKYKAVPLT 148 (416)
T ss_pred HHHHHHhccccceeee-eeecchhHHHHHHHhccC--CCCeEEEecCCcchhHHHHhccCCCCcccHHHhCcceeecccc
Confidence 4578888887521111 234889999999888766 9887654 333344443332 3346677889998
Q ss_pred CCCccCHHHHHHHHHcCCCCcEEEEEee--C--CCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCC
Q 011842 215 ISGEIDCADFKAKLLQNKDKPAIINVNI--G--TTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAP 290 (476)
Q Consensus 215 ~~g~~D~~~Le~~l~~~~~~p~~vv~t~--g--tt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~ 290 (476)
.+|.+|.+.++..+.++++ +|.+.- | --+.=.+++|++++++.|+-| +|+.+.||.+||-++-.. .+
T Consensus 149 ~~gkiD~~~v~~~i~~~tk---li~IQRS~GY~~RpS~~I~eI~~~i~~vk~in---pn~ivFVDNCYGEFvE~~-EP-- 219 (416)
T COG4100 149 ADGKIDIQAVKTAISDRTK---LIGIQRSKGYAWRPSLSIAEIEEMITFVKEIN---PNVIVFVDNCYGEFVEEK-EP-- 219 (416)
T ss_pred cCCcccHHHHHHhcCccce---EEEEEeccCcCCCCcccHHHHHHHHHHHHhcC---CCEEEEEeccchhhhhcc-Cc--
Confidence 9999999999999998886 555542 2 223334577888888888755 366999999998765421 11
Q ss_pred CCCCcccccEEEEcCCCCCCCC--CCceeEEeehhhhhhh
Q 011842 291 KVSFKKPIGSVSVSGHKFVGCP--MPCGVQITRMEHINVL 328 (476)
Q Consensus 291 ~~~~~~~~Dsi~~s~hK~l~~p--~~~G~l~~~~~~~~~l 328 (476)
.+ -++|.+..|.=|.-+++ ...|++..|.++++..
T Consensus 220 -t~--vGaDliAGSLIKNpGGgiaktGGYiaGk~~~ve~~ 256 (416)
T COG4100 220 -TH--VGADLIAGSLIKNPGGGIAKTGGYIAGKAELVEAA 256 (416)
T ss_pred -cc--cchhhhccceeeCCCCceeeccceeechHHHHHhh
Confidence 11 23888998888876543 3457777777776543
No 391
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=97.53 E-value=0.026 Score=59.55 Aligned_cols=338 Identities=16% Similarity=0.120 Sum_probs=177.4
Q ss_pred CCCCcHHHHHHHHHHHHhccc--ccccCCCCcCCcchHHHHHHHHHhhCCCCCCcccCccchhhHH--HHHH--HHHHHH
Q 011842 76 DKEAYMAGVLARYRKTLMERT--KHHLGYPYNLDFDYGALAQLQHFSINNLGDPFIESNYGVHSRQ--FEVG--VLDWFA 149 (476)
Q Consensus 76 ~~~~~~~~il~~~~~~~~~~~--~~~~g~p~~~~~~~~~l~~~l~~~~n~~g~~~~~~~~~~~~~~--le~~--~~~~la 149 (476)
+.+..-.+.+..+.+...++. ..|+|.-.+-...+. .++...+.|.+-...+.|+.....+ ||.- ....++
T Consensus 97 ~~~~~E~eml~~l~~ia~kNk~~ksfIGmGYyn~~vP~---~I~RNilenp~W~TqYTPYQ~EIsQGRLEsllNyQTmi~ 173 (1001)
T KOG2040|consen 97 DKPLCESEMLQHLEDIASKNKIWKSFIGMGYYNTHVPA---VILRNILENPGWYTQYTPYQAEISQGRLESLLNYQTMIT 173 (1001)
T ss_pred CCCcCHHHHHHHHHHHHhhhhHHHHhhccccccccCcH---HHHHHhhhCCcceeccCCCchhhhhhhHHHHhhhHHhhh
Confidence 345556677777776655442 236673333332222 2344455565433333344322211 2221 235677
Q ss_pred HHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHH----HcCCeEEEEeCCCCCccCHHHHH
Q 011842 150 RLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAAR----MYRMECVKVDCLISGEIDCADFK 225 (476)
Q Consensus 150 ~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~----~~G~~v~~v~~~~~g~~D~~~Le 225 (476)
++.|++-.+ .-+.--||.|--...++.+. .++...+++...|+-....++ -+|+++... |+ +
T Consensus 174 dlTGL~~aN--ASLLDEgTAaaEAm~l~~~~-~krkk~vvd~~~hpqtlsV~~TRa~~~~i~v~~~--------~~---~ 239 (1001)
T KOG2040|consen 174 DLTGLPMAN--ASLLDEGTAAAEAMALCNRI-NKRKKFVVDSNCHPQTLSVVKTRAKGFGIKVVVS--------DI---K 239 (1001)
T ss_pred hccCCcccc--hhhhccchhHHHHHHHHHhh-cccceEEecCCCCcchhhhhhccccccceeEEec--------CH---H
Confidence 888888543 33333444333222222222 244558888889975544332 224443222 22 2
Q ss_pred HHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCcccccEEEEcC
Q 011842 226 AKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKPIGSVSVSG 305 (476)
Q Consensus 226 ~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~~Dsi~~s~ 305 (476)
+.-... +...-|.+..|.| .|.+.|..++++.+++.|. .+++--- ...+...+.. +.-++|+...|+
T Consensus 240 ~~~~s~-~~v~gvlvQYP~t-~G~i~d~~el~~~a~~~~s-----~vv~atD--LLaLtiLrpP----gefGaDIavGSs 306 (1001)
T KOG2040|consen 240 EADYSS-KDVSGVLVQYPDT-EGSVLDFDELVELAHANGS-----LVVMATD--LLALTILRPP----GEFGADIAVGSS 306 (1001)
T ss_pred Hhhccc-cceeEEEEEcCCC-CCcccCHHHHHHHhhccCc-----eEEEeeh--hhHHHccCCh----hhcCceeeeccc
Confidence 221111 2223466655654 5899999999999999997 5443211 1111111211 112489999998
Q ss_pred CCCCC----CCCCceeEEeehhhhhhhcCC-----ccccCC---------------CC--CcccCCCCChhHHH-H-HHH
Q 011842 306 HKFVG----CPMPCGVQITRMEHINVLSSN-----VEYLAS---------------RD--ATIMGSRNGHAPIF-L-WYT 357 (476)
Q Consensus 306 hK~l~----~p~~~G~l~~~~~~~~~l~~~-----~~yl~~---------------~~--~~~~~sr~~~~~l~-~-~~~ 357 (476)
..++- +++-.|++.+++++.+.++-. .+-+.. .| .+=.|+. .+.++ . ...
T Consensus 307 QRFGVPlGYGGPHAaFfAv~~~l~R~mPGRiiGvtkD~~gk~a~RLALQTREQHIrRDKATSNICTA--QALLANmaAmy 384 (1001)
T KOG2040|consen 307 QRFGVPLGYGGPHAAFFAVSESLVRMMPGRIIGVTKDALGKEAYRLALQTREQHIRRDKATSNICTA--QALLANMAAMY 384 (1001)
T ss_pred cccCccccCCCchHHHHHHHHHHHhhCCCceEeeeecccccHHHHHHHHHHHHHhhhhccchhhhHH--HHHHHHHHHHH
Confidence 87643 223356677777665443211 111100 00 0111221 11122 1 112
Q ss_pred HHHhChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecCC-cHHHh-----hceeec-ccCCEEEEEEcCC
Q 011842 358 LNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERPQ-DEEFV-----RRWQLA-CQGNIAHVVVMPN 430 (476)
Q Consensus 358 l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~-~~~~~-----~~~~l~-~~~~~lRv~~~~~ 430 (476)
.-+.|.+|++++.++.+..+.+|...|+..|..+.-.+-.-++-++... .+++. +++++. -..+.+-+++-..
T Consensus 385 aiYHGp~gL~~IArrvh~~T~~l~~~l~~aghel~~k~fFDTLkI~~~~s~~~~l~rA~~~~iNlr~~ed~tigvslDET 464 (1001)
T KOG2040|consen 385 AIYHGPHGLKEIARRVHNLTLILAEGLKNAGHELQHKPFFDTLKIRCGCSAEEVLDRAAKRQINLRLVEDGTIGVSLDET 464 (1001)
T ss_pred hhhcCcHHHHHHHHHHHHHHHHHHHHHhhcchhhccccccceEEEEecCcHHHHHHHHHhhcCceEEeecCceEEeeccc
Confidence 2456999999999999999999999999888543333322333344443 22221 223332 2456788889999
Q ss_pred CCHHHHHHHHHHHHH
Q 011842 431 VTIDKLDDFLNELIE 445 (476)
Q Consensus 431 ~T~edid~~~~~l~~ 445 (476)
++.+|+|.++..+.+
T Consensus 465 v~~~DvddLl~vf~~ 479 (1001)
T KOG2040|consen 465 VTEKDVDDLLWVFNE 479 (1001)
T ss_pred ccHHHHHHHHHHHcc
Confidence 999999999999863
No 392
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=97.40 E-value=0.0043 Score=60.85 Aligned_cols=207 Identities=16% Similarity=0.136 Sum_probs=115.1
Q ss_pred CHHHHHHHHHcC--CCCcEEEEEeeC-CCcccc----ccCHHHHHHHHHHhCCCCCceEEEEecCccccc--ccccccCC
Q 011842 220 DCADFKAKLLQN--KDKPAIINVNIG-TTVKGA----VDDLDLVIQTLEESGFTQDRFYIHCDGALFGLM--MPFVKKAP 290 (476)
Q Consensus 220 D~~~Le~~l~~~--~~~p~~vv~t~g-tt~tG~----id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~--~~~~~~~~ 290 (476)
.++++|+.|.+. .+.|..-++..| .+.-|. -+=+..+.+|+++||+ -++||+++-|+- ..+..|.
T Consensus 254 Cl~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v-----~fivDEVQTGgGaTGk~WaHe- 327 (484)
T KOG1405|consen 254 CLAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGV-----AFIVDEVQTGGGATGKFWAHE- 327 (484)
T ss_pred HHHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCe-----EEEeeeeecCCCccCceeeeh-
Confidence 457788888654 234654333333 444343 3558999999999999 999999995432 2222222
Q ss_pred CCCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHH
Q 011842 291 KVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEV 370 (476)
Q Consensus 291 ~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~ 370 (476)
.++.....|.+|+| +|+.. .| ++..+++ .....|-.. .|.+|.+ ...+-+-..++.+.. +..+
T Consensus 328 hw~l~~PpD~vTFS-KK~q~----gG-ffh~~~f----rpn~pYrif--NTWmGdP--~k~lll~~vv~~I~~---~~Ll 390 (484)
T KOG1405|consen 328 HWNLDSPPDVVTFS-KKFQT----GG-FFHDEEF----RPNEPYRIF--NTWMGDP--SKNLLLEEVVQEIKR---EDLL 390 (484)
T ss_pred hcCCCCCccceehh-hhhhc----Cc-cccCccc----CCCchHHHh--hhhcCCh--HHHHHHHHHHHHHhH---HHHH
Confidence 25555568988876 45443 23 3434332 222233211 1233332 112333333333322 3455
Q ss_pred HHHHHHHHHHHHHHHhc----CCeEe-ecCCeeEEEEecCCcH---HHh-----hceee-cccCCEEEEEEcCCCCHHHH
Q 011842 371 QKCLRNAHYLKDRLLDA----GISAM-LNELSSTVVFERPQDE---EFV-----RRWQL-ACQGNIAHVVVMPNVTIDKL 436 (476)
Q Consensus 371 ~~~~~~a~~l~~~L~~~----g~~~~-~~~~~~iv~f~~~~~~---~~~-----~~~~l-~~~~~~lRv~~~~~~T~edi 436 (476)
+.+...-++|..+|.++ |...- .......+.|..|.+. .+. .+.++ -|....+|+..+--.++...
T Consensus 391 ~n~~~vG~~l~~gL~~Lq~~~p~~~~~~RGrGTF~a~d~ps~~~Rdk~i~~~~~nGv~~GGCg~~siRfRPsLvf~~~Ha 470 (484)
T KOG1405|consen 391 NNVAHVGKALLKGLLELQAKYPGKINNLRGRGTFIAWDCPSGSIRDKLILIARLNGVNLGGCGDKSIRFRPSLVFRKHHA 470 (484)
T ss_pred HHHHHHHHHHHHHHHHHHHhCchhhhcccccceEEEEeCCChHHHHHHHHHHHHcCceecccccceeeeccceeehhhhH
Confidence 66666777787777664 22111 1112344567776532 222 22222 24556788888888899999
Q ss_pred HHHHHHHHHHHHH
Q 011842 437 DDFLNELIENRST 449 (476)
Q Consensus 437 d~~~~~l~~~~~~ 449 (476)
+-|++.+.++.+.
T Consensus 471 ~i~l~~~~k~l~~ 483 (484)
T KOG1405|consen 471 DIFLDIFDKILAG 483 (484)
T ss_pred HHHHHHHHHHhcc
Confidence 9999999887653
No 393
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=97.11 E-value=0.051 Score=52.68 Aligned_cols=272 Identities=11% Similarity=0.113 Sum_probs=156.1
Q ss_pred ccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCC-eEEEEeC--CCCCccCHHHHHHHHHcCCCCc
Q 011842 159 YWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRM-ECVKVDC--LISGEIDCADFKAKLLQNKDKP 235 (476)
Q Consensus 159 ~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~-~v~~v~~--~~~g~~D~~~Le~~l~~~~~~p 235 (476)
..|+-+-+||.|+..+.--.-..+++..||+|.++........+-.|. .+...+. .++-.+|++.+...|+..+..-
T Consensus 100 v~~vQslsGTGAl~~~A~Fl~~~~~~~~VY~SnPTW~nH~~if~~aGf~tv~~Y~yWd~~~k~~d~e~~Lsdl~~APe~s 179 (410)
T KOG1412|consen 100 VFGVQSLSGTGALRIAADFLATFYNKNTVYVSNPTWENHHAIFEKAGFTTVATYPYWDAENKCVDLEGFLSDLESAPEGS 179 (410)
T ss_pred ccceeeccccchhhhhHHHHHHhcccceeEecCCchhHHHHHHHHcCCceeeeeeeecCCCceecHHHHHHHHhhCCCCc
Confidence 347778899999988765554556788899999998888888888885 4555554 2345789999988888765433
Q ss_pred EEEEEeeCCCcccc---ccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCC----Ccccc-cEEEEcCCC
Q 011842 236 AIINVNIGTTVKGA---VDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVS----FKKPI-GSVSVSGHK 307 (476)
Q Consensus 236 ~~vv~t~gtt~tG~---id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~----~~~~~-Dsi~~s~hK 307 (476)
+++.-....++||. .+...+|+++.++.+. +...|-||-|+..-.... ..+. +..+. -+++-|+.|
T Consensus 180 i~iLhaCAhNPTGmDPT~EQW~qia~vik~k~l-----f~fFDiAYQGfASGD~~~-DawAiR~fV~~g~e~fv~QSFaK 253 (410)
T KOG1412|consen 180 IIILHACAHNPTGMDPTREQWKQIADVIKSKNL-----FPFFDIAYQGFASGDLDA-DAWAIRYFVEQGFELFVCQSFAK 253 (410)
T ss_pred EEeeeccccCCCCCCCCHHHHHHHHHHHHhcCc-----eeeeehhhcccccCCccc-cHHHHHHHHhcCCeEEEEhhhhh
Confidence 33333334777774 2447889999999999 999999986654311111 1111 11222 356778888
Q ss_pred CCC-CCCCceeE--Eeehh-hh----hhhc--CCccccCCCCCcccCCCCCh------hHHHHHHHHHHhChhcHHHHHH
Q 011842 308 FVG-CPMPCGVQ--ITRME-HI----NVLS--SNVEYLASRDATIMGSRNGH------APIFLWYTLNRKGYKGFQKEVQ 371 (476)
Q Consensus 308 ~l~-~p~~~G~l--~~~~~-~~----~~l~--~~~~yl~~~~~~~~~sr~~~------~~l~~~~~l~~~g~~g~~~~~~ 371 (476)
.+| -.-+.|-+ ++++. .+ ..+. ....|-. ++-.|.|-.+ ....+| ...++.+-.
T Consensus 254 NfGlYneRvGnltvv~~n~a~i~~v~SQl~lviR~~~SN---PPAyGArIV~kvL~tP~lre~W-------~~sik~Mss 323 (410)
T KOG1412|consen 254 NFGLYNERVGNLTVVVNNPAVIAGVKSQLTLVIRSNWSN---PPAYGARIVHKVLSTPELREQW-------IQSIKTMSS 323 (410)
T ss_pred hcccccccccceEEEecChhHHHHHHHHHHHHHhhccCC---CcchhhHHHHHHhcCHHHHHHH-------HHHHHHHHH
Confidence 554 34455544 34443 21 1111 1111110 1111222111 011222 245666777
Q ss_pred HHHHHHHHHHHHHHhcCCeE---eecCCeeEEEEecCCcH---HHhhcee--ecccCCEEEEEEcCCCCHHHHHHHHHHH
Q 011842 372 KCLRNAHYLKDRLLDAGISA---MLNELSSTVVFERPQDE---EFVRRWQ--LACQGNIAHVVVMPNVTIDKLDDFLNEL 443 (476)
Q Consensus 372 ~~~~~a~~l~~~L~~~g~~~---~~~~~~~iv~f~~~~~~---~~~~~~~--l~~~~~~lRv~~~~~~T~edid~~~~~l 443 (476)
|..+++..|++.|..++-.- -......+.+|....+. .+.+... +-..| |++++ ..+...+|.+..+|
T Consensus 324 RI~~MR~aLrd~L~aL~TPGtWDHI~~QiGMFSyTGLtp~qV~~li~~h~vyLl~~G---RInis-GLN~~NveyVAkAI 399 (410)
T KOG1412|consen 324 RIKKMRTALRDHLVALKTPGTWDHITQQIGMFSYTGLTPAQVDHLIENHKVYLLSDG---RINIS-GLNMKNVEYVAKAI 399 (410)
T ss_pred HHHHHHHHHHHHHHhcCCCCcHHHHHhhccceeecCCCHHHHHHHHHhceEEEecCC---cEeee-ccccccHHHHHHHH
Confidence 88888888999888764210 01123455555543321 2233222 22233 55554 34556788888888
Q ss_pred HHHHHHH
Q 011842 444 IENRSTW 450 (476)
Q Consensus 444 ~~~~~~~ 450 (476)
.+..+.+
T Consensus 400 de~Vr~~ 406 (410)
T KOG1412|consen 400 DETVRAI 406 (410)
T ss_pred HHHHHhh
Confidence 8877654
No 394
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=96.84 E-value=0.045 Score=54.07 Aligned_cols=277 Identities=13% Similarity=0.064 Sum_probs=131.5
Q ss_pred hHHHHHHHHHHHHHHcCC-CCCcccEEEcCCchhHHHHHHHHHHhh----CCCcEEEecCCCchHHHHHHHHcCCeEEEE
Q 011842 137 SRQFEVGVLDWFARLWEL-ENNEYWGYITNCGTEGNLHGILVGREV----FPDGILYASRESHYSVFKAARMYRMECVKV 211 (476)
Q Consensus 137 ~~~le~~~~~~la~l~g~-~~~~~~g~~t~ggt~An~~al~aa~~~----~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v 211 (476)
..+||+++++ |.++.|- -.+...++|.+|+|+-.+.++.++-.. .+...|+...+-|.++.....++.-..-..
T Consensus 45 s~eL~~~Ir~-LH~~VGNAvt~gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt~~f~s~~y~w 123 (363)
T PF04864_consen 45 SPELERQIRR-LHRVVGNAVTDGRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPEQTDFFDSRLYKW 123 (363)
T ss_dssp -HHHHHHHHH-HHHHH-SB--TTSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHCCCT-BTTEEE
T ss_pred cHHHHHHHHH-HHHHhccccccCcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHHHHHhccccCccc
Confidence 3578877665 4556664 334456888888898888877765332 123467777777777776666554333333
Q ss_pred eCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCC
Q 011842 212 DCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPK 291 (476)
Q Consensus 212 ~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~ 291 (476)
.-|.. ... ..++..+.+=++|+|+||.|.+-. .+ ++.-+. .++-|=||-+..+.-.
T Consensus 124 ~Gda~------~~~---~~~~~~~~IElVTSPNNPDG~lr~--~V---~~g~~~-----k~I~D~AYYWPhyTpI----- 179 (363)
T PF04864_consen 124 AGDAS------NFK---NSDNPSPYIELVTSPNNPDGQLRE--AV---LNGSSG-----KVIHDLAYYWPHYTPI----- 179 (363)
T ss_dssp EEECC------CGT---T-S-CCGEEEEEESS-TTT--------S---STTTEE-----EEEEE-TT-STTTS-------
T ss_pred cccHH------hhc---cCCCCCCeEEEEeCCCCCcccccc--hh---cCCCCc-----ceeeeeeeeccccccc-----
Confidence 32211 111 222345778889999999998732 11 122222 6788999876554311
Q ss_pred CCCcccccEEEEcCCCCC-CCCCCceeEEeehhh-hhhhcCCccccCCCCCcccCCCCC-hhHHHHHHH-HHHhChh---
Q 011842 292 VSFKKPIGSVSVSGHKFV-GCPMPCGVQITRMEH-INVLSSNVEYLASRDATIMGSRNG-HAPIFLWYT-LNRKGYK--- 364 (476)
Q Consensus 292 ~~~~~~~Dsi~~s~hK~l-~~p~~~G~l~~~~~~-~~~l~~~~~yl~~~~~~~~~sr~~-~~~l~~~~~-l~~~g~~--- 364 (476)
.....-|+..++..|.- -++.+.||-++|++- .+.+ ..|+.- .++..||-. ..++++..+ +...+..
T Consensus 180 -~~~aD~DiMLFT~SK~TGHAGSR~GWAlVKD~~Va~kM---~~y~~l--nTiGvS~dsQLRa~kiLk~v~~~~~~~~~~ 253 (363)
T PF04864_consen 180 -TAPADHDIMLFTLSKLTGHAGSRFGWALVKDEEVAKKM---TKYMEL--NTIGVSRDSQLRALKILKVVLDGYGTEKGT 253 (363)
T ss_dssp --S-B--SEEEEEHHHHCS-GGG-EEEEEES-HHHHHHH---HHHHHH--HCSS--HHHHHHHHHHHHHHHHHCCHHTTT
T ss_pred -CCCCCCceEEEEEecccCccccccceeeecCHHHHHHH---HHHHHH--hcccCcHHHHHHHHHHHHHHHhcccCCCCc
Confidence 11112478888888844 478899999999974 3333 234321 123334321 122332222 1222211
Q ss_pred --cHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCe-------------eEEEE-ecCC-----cHHHhhceeec------
Q 011842 365 --GFQKEVQKCLRNAHYLKDRLLDAGISAMLNELS-------------STVVF-ERPQ-----DEEFVRRWQLA------ 417 (476)
Q Consensus 365 --g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~-------------~iv~f-~~~~-----~~~~~~~~~l~------ 417 (476)
-+.--.+.+.++=+.|++.+...+.+.+..-.. +-..+ +... -.++.+.-.+-
T Consensus 254 ~~~F~f~~~~M~~RW~~L~~~~~~S~rFSLq~~~~~yC~ff~~~~~psPafAWlkCe~eed~DC~~~l~~~~I~tr~G~~ 333 (363)
T PF04864_consen 254 EDIFHFGYSTMRERWEKLRAAVSASKRFSLQKFSPQYCNFFKRVREPSPAFAWLKCEREEDEDCYAVLREAKIITRSGVL 333 (363)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHCCSSSEEE---SCEEETTTTCEEE---SEEEEEESSCGGSSHHHHHHCTTEEEEEGGG
T ss_pred cchHHHHHHHHHHHHHHHHHHHHhcCceecCcCCchhccccccccCCCCCeEEEecCCcccccHHHHHHhCCcccCCCCc
Confidence 112222334444455666676666555432111 11122 1111 12333333221
Q ss_pred --ccCCEEEEEEcCCCCHHHHHHHHHHHHHH
Q 011842 418 --CQGNIAHVVVMPNVTIDKLDDFLNELIEN 446 (476)
Q Consensus 418 --~~~~~lRv~~~~~~T~edid~~~~~l~~~ 446 (476)
.+..++|+++. -++++.|.|++.|..+
T Consensus 334 fga~~ryVRlSml--~~~d~Fd~l~~rL~~l 362 (363)
T PF04864_consen 334 FGADSRYVRLSML--KRDDDFDQLLERLSKL 362 (363)
T ss_dssp GTS-TTEEEEESS--S-HHHHHHHHHHHHCC
T ss_pred cCCCCCeEEEecc--CCHHHHHHHHHHHHhh
Confidence 22468898764 7899999999988653
No 395
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=96.56 E-value=0.0058 Score=54.18 Aligned_cols=58 Identities=9% Similarity=0.051 Sum_probs=49.8
Q ss_pred hhHHHHHHHHHHHHHHcC--CCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCch
Q 011842 136 HSRQFEVGVLDWFARLWE--LENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHY 195 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g--~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~ 195 (476)
+..++++++++|+.+.+| .+.+..++++|+|++.|+..++.+..+ ||+.|+++++.|.
T Consensus 93 G~~~lR~AiA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l~~~l~d--pGD~VlVp~P~Y~ 152 (153)
T PLN02994 93 GLANFRKAIANFMAEARGGRVKFDADMIVLSAGATAANEIIMFCIAD--PGDAFLVPTPYYA 152 (153)
T ss_pred CcHHHHHHHHHHHHHHhCCCCccchhheEEcCCHHHHHHHHHHHHcC--CCCEEEEeCCCCC
Confidence 567999999999999988 443445799999999999999888887 9999999998874
No 396
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=94.71 E-value=0.28 Score=48.45 Aligned_cols=268 Identities=12% Similarity=0.088 Sum_probs=155.3
Q ss_pred EEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeC--CCCCccCHHHHHHHHHcCCCCcEEEE
Q 011842 162 YITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDC--LISGEIDCADFKAKLLQNKDKPAIIN 239 (476)
Q Consensus 162 ~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~--~~~g~~D~~~Le~~l~~~~~~p~~vv 239 (476)
+-|-+||.|.-.+..-....+|...|+++.++.....+.....|+.+..+.. ..+..+|.+-+-+.|.+....-+++.
T Consensus 124 vQ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh~~if~~ag~~~~~yrYyd~~t~gld~~g~ledl~~~p~gs~ilL 203 (427)
T KOG1411|consen 124 VQTLSGTGALRVGAEFLARFYPSRDIYIPDPTWGNHKNIFKDAGLPVKFYRYYDPKTRGLDFKGMLEDLGEAPEGSIILL 203 (427)
T ss_pred EEeccCcchhhHHHHHHHhhccccceeecCCcccccCccccccCcceeeeeeccccccccchHHHHHHHhcCCCCcEEEe
Confidence 3456888887766554444468889999999877766777778887766554 24577898888777766543222333
Q ss_pred EeeCCCcccc---ccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccc-cCCCC-CCc-cc-ccEEEEcCCCCCC-C
Q 011842 240 VNIGTTVKGA---VDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVK-KAPKV-SFK-KP-IGSVSVSGHKFVG-C 311 (476)
Q Consensus 240 ~t~gtt~tG~---id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~-~~~~~-~~~-~~-~Dsi~~s~hK~l~-~ 311 (476)
-....++||. .+..++|.++.++.+. +-+.|.||-|+..-... ....+ -+. .+ --.++-|+.|.+| -
T Consensus 204 haCaHNPTGvDPt~eqw~ki~~~~~~k~~-----~pffDmAYQGfaSG~~d~DA~avR~F~~~g~~~~laQSyAKNMGLY 278 (427)
T KOG1411|consen 204 HACAHNPTGVDPTKEQWEKISDLIKEKNL-----LPFFDMAYQGFASGDLDKDAQAVRLFVEDGHEILLAQSYAKNMGLY 278 (427)
T ss_pred ehhhcCCCCCCccHHHHHHHHHHhhhccc-----cchhhhhhcccccCCchhhHHHHHHHHHcCCceEeehhhhhhcchh
Confidence 2234777764 3558899999999999 89999998765432111 11000 011 12 2356677778665 2
Q ss_pred CCCceeE--Eeehh-hhh----hh--cCCccccCCCCCcccCCCCChh------HHHHHHHHHHhChhcHHHHHHHHHHH
Q 011842 312 PMPCGVQ--ITRME-HIN----VL--SSNVEYLASRDATIMGSRNGHA------PIFLWYTLNRKGYKGFQKEVQKCLRN 376 (476)
Q Consensus 312 p~~~G~l--~~~~~-~~~----~l--~~~~~yl~~~~~~~~~sr~~~~------~l~~~~~l~~~g~~g~~~~~~~~~~~ 376 (476)
+-+.|.+ ++++. ... .+ ...+-|. ...+.|+|-... ...+|. ....-+.+|.+.+
T Consensus 279 gERvGa~svvc~~ad~A~rV~SQlk~liRpmYS---nPP~hGArIv~~Il~d~~l~~~W~-------~evk~MadRi~~m 348 (427)
T KOG1411|consen 279 GERVGALSVVCKDADEAKRVESQLKILIRPMYS---NPPLHGARIVATILSDPDLKNQWL-------GEVKGMADRIISM 348 (427)
T ss_pred hhccceeEEEecCHHHHHHHHHHHHHHhccccc---CCCccchhhhhhccCChHHHHHHH-------HHHHHHHHhhhhh
Confidence 3455554 33433 211 11 1233342 123344442211 122442 3456677888889
Q ss_pred HHHHHHHHHhcCCeEee---cCCeeEEEEecCCcH---HHhhceeeccc-CCEEEEEEcCCCCHHHHHHHHHHHHHHH
Q 011842 377 AHYLKDRLLDAGISAML---NELSSTVVFERPQDE---EFVRRWQLACQ-GNIAHVVVMPNVTIDKLDDFLNELIENR 447 (476)
Q Consensus 377 a~~l~~~L~~~g~~~~~---~~~~~iv~f~~~~~~---~~~~~~~l~~~-~~~lRv~~~~~~T~edid~~~~~l~~~~ 447 (476)
++.|.+.|+..|-..-. ...-..++|..-.++ .+.+.+.+-.. .+ |+|+. ..+...++.|.++|.++.
T Consensus 349 R~~L~d~L~~~gs~~~W~hI~~QIGMF~fTgl~peQv~~l~ke~~iYmT~dG--RiS~a-G~ss~nV~yLa~aih~vt 423 (427)
T KOG1411|consen 349 RQQLFDALEKEGSPGNWSHITKQIGMFCFTGLNPEQVDWLTKEYHIYLTKDG--RISMA-GLSSSNVPYLADAIHAVT 423 (427)
T ss_pred HHHHhHHhhcCCCCccHHHHHHhhheeeecCCCHHHHHHHHhhheeeeccCc--eEeec-cccccCCcccchhhHhHh
Confidence 99999999887643211 123456677654432 23455555322 23 66654 455566777777776654
No 397
>COG2515 Acd 1-aminocyclopropane-1-carboxylate deaminase [Amino acid transport and metabolism]
Probab=85.71 E-value=12 Score=36.76 Aligned_cols=134 Identities=13% Similarity=0.051 Sum_probs=79.7
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhh--CCCcEEEecCCC--ch--HHHHHHHHcCCeEE
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREV--FPDGILYASRES--HY--SVFKAARMYRMECV 209 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~--~p~~~Vl~s~~~--H~--S~~~~~~~~G~~v~ 209 (476)
..+.||--+-+.+.+ .++-++|-||.+||.....++... .=+.+.++.... +. ...-..+.+|++++
T Consensus 48 K~RKLefll~eal~~-------g~dTlvT~GgiQSNh~r~tAavA~~lGl~~v~ile~~~~~y~~ngn~Ll~~l~G~~~~ 120 (323)
T COG2515 48 KIRKLEFLLGEALRK-------GADTLVTYGGIQSNHVRQTAAVAAKLGLKCVLILENIEANYLLNGNLLLSKLMGAEVR 120 (323)
T ss_pred HHHHHHHHHhhhhhc-------CCcEEEEecccchhHHHHHHHHHHhcCCcEEEEEeccccccccccchhhhhhcCceEE
Confidence 345555544444332 244789999999998655443332 123455554433 00 12334567799999
Q ss_pred EEeCCCCC--ccCHHHHHHHHHcCCCCcEEEEEeeCCCc---cccccCHHHHHHHHHHhCCCCCceEEEEecCcccc
Q 011842 210 KVDCLISG--EIDCADFKAKLLQNKDKPAIINVNIGTTV---KGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGL 281 (476)
Q Consensus 210 ~v~~~~~g--~~D~~~Le~~l~~~~~~p~~vv~t~gtt~---tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~ 281 (476)
.++...+. ....+.+.+-+++..++|.+| ..-|+++ .|.+.=..||.+.++++ . .|-.+|.+.-+++
T Consensus 121 ~~~~~~d~~~~~~~~~~~e~~~~~g~kpyvI-p~GG~~~~g~lGyv~~a~Ei~~Q~~~~-~---~fD~vVva~gs~g 192 (323)
T COG2515 121 AVDAGTDIGINASAEELAEEVRKQGGKPYVI-PEGGSSPLGALGYVRLALEIAEQAEQL-L---KFDSVVVAPGSGG 192 (323)
T ss_pred EecCCCChhhchhhHHHHHHHHhcCCCCcEe-ccCCcCccccccHHHHHHHHHHHHhhc-c---CCCEEEEeCCCcc
Confidence 98876555 445577778888777777555 4455777 45556677888888874 3 1144555554433
No 398
>COG1504 Uncharacterized conserved protein [Function unknown]
Probab=65.34 E-value=18 Score=29.80 Aligned_cols=44 Identities=16% Similarity=0.273 Sum_probs=37.4
Q ss_pred CccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCC
Q 011842 217 GEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGF 265 (476)
Q Consensus 217 g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~ 265 (476)
..+++++|++.+.+.+. .+++ ||...|.+.=.++..+++++.++
T Consensus 47 Hkl~~eEle~~lee~~E---~ivv--GTG~~G~l~l~~ea~e~~r~k~~ 90 (121)
T COG1504 47 HKLALEELEELLEEGPE---VIVV--GTGQSGMLELSEEAREFFRKKGC 90 (121)
T ss_pred cccCHHHHHHHHhcCCc---EEEE--ecCceeEEEeCHHHHHHHHhcCC
Confidence 57899999999998765 5555 77788999888999999999996
No 399
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=64.56 E-value=65 Score=29.96 Aligned_cols=71 Identities=13% Similarity=0.093 Sum_probs=44.1
Q ss_pred EEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCC
Q 011842 186 ILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGF 265 (476)
Q Consensus 186 ~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~ 265 (476)
+....+.......+..+-.|++++..+.+ |.+.|.+++..-. .|+...+.......+--..|++.|++.|+
T Consensus 25 V~~l~R~~~~~~~~~l~~~g~~vv~~d~~-----~~~~l~~al~g~d----~v~~~~~~~~~~~~~~~~~li~Aa~~agV 95 (233)
T PF05368_consen 25 VRALVRDPSSDRAQQLQALGAEVVEADYD-----DPESLVAALKGVD----AVFSVTPPSHPSELEQQKNLIDAAKAAGV 95 (233)
T ss_dssp EEEEESSSHHHHHHHHHHTTTEEEES-TT------HHHHHHHHTTCS----EEEEESSCSCCCHHHHHHHHHHHHHHHT-
T ss_pred cEEEEeccchhhhhhhhcccceEeecccC-----CHHHHHHHHcCCc----eEEeecCcchhhhhhhhhhHHHhhhcccc
Confidence 44444444334444556679988766665 8999999997543 34444443334455566789999999998
No 400
>PF08734 GYD: GYD domain; InterPro: IPR014845 These proteins of unknown function are usually less than 100 amino acids in length. They may belong to the dimeric alpha/beta barrel superfamily.
Probab=59.64 E-value=61 Score=25.77 Aligned_cols=75 Identities=19% Similarity=0.206 Sum_probs=46.8
Q ss_pred hcHHHHHHHHHHHHHHHHHHHHhcCCeEe-----ecCCeeEEEEecCCcHHHhhceeec-ccCCEEEEEEcCCCCHHHHH
Q 011842 364 KGFQKEVQKCLRNAHYLKDRLLDAGISAM-----LNELSSTVVFERPQDEEFVRRWQLA-CQGNIAHVVVMPNVTIDKLD 437 (476)
Q Consensus 364 ~g~~~~~~~~~~~a~~l~~~L~~~g~~~~-----~~~~~~iv~f~~~~~~~~~~~~~l~-~~~~~lRv~~~~~~T~edid 437 (476)
+|.+...+. .++.+.+.+.+++.|..+. ..+...++.+..|+++...+ +.+. ...+.+|..+++-.+.+++.
T Consensus 10 ~g~~~~~~~-~~R~~a~~~~~e~~Gg~l~~~y~t~G~yD~v~i~eaPD~~~a~~-~~l~i~~~G~v~~et~~a~~~~e~~ 87 (91)
T PF08734_consen 10 EGAKGIKDS-PDRAEAVRALIEALGGKLKSFYWTLGEYDFVVIVEAPDDETAAA-ASLAIRSSGNVRTETLRAFPWDEFD 87 (91)
T ss_pred HHHHHHhhc-HHHHHHHHHHHHHcCCEEEEEEEecCCCCEEEEEEcCCHHHHHH-HHHHHHcCCceEEEEEecCCHHHHH
Confidence 344444444 5556667777777776543 23455777788887543332 3332 33456787888999999988
Q ss_pred HHH
Q 011842 438 DFL 440 (476)
Q Consensus 438 ~~~ 440 (476)
+++
T Consensus 88 ~~~ 90 (91)
T PF08734_consen 88 EIV 90 (91)
T ss_pred HHh
Confidence 765
No 401
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=58.72 E-value=1.2e+02 Score=29.38 Aligned_cols=98 Identities=11% Similarity=0.075 Sum_probs=55.3
Q ss_pred EEcCCchhHHHHHH--HHHHhhCCCcEEEecCCCchHHH---HHHHHcCCeEEEEeCCCCCccCHHHHHHHHHcCCCCcE
Q 011842 162 YITNCGTEGNLHGI--LVGREVFPDGILYASRESHYSVF---KAARMYRMECVKVDCLISGEIDCADFKAKLLQNKDKPA 236 (476)
Q Consensus 162 ~~t~ggt~An~~al--~aa~~~~p~~~Vl~s~~~H~S~~---~~~~~~G~~v~~v~~~~~g~~D~~~Le~~l~~~~~~p~ 236 (476)
++.+|+|.++=.++ ..+++ ..+.|++.+...--.. +.-...|.++..++.|-.-.-+.+.|...+..+....-
T Consensus 9 ~lITGASsGIG~~~A~~lA~~--g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~~Id 86 (265)
T COG0300 9 ALITGASSGIGAELAKQLARR--GYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGGPID 86 (265)
T ss_pred EEEECCCchHHHHHHHHHHHC--CCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCCccc
Confidence 34447777765444 33443 5677888876542221 12222367788888874333345555555555533334
Q ss_pred EEEEeeCCCccccc--cCHHHHHHHHH
Q 011842 237 IINVNIGTTVKGAV--DDLDLVIQTLE 261 (476)
Q Consensus 237 ~vv~t~gtt~tG~i--d~l~~I~~ia~ 261 (476)
+++-|+|....|.+ .+++++.+..+
T Consensus 87 vLVNNAG~g~~g~f~~~~~~~~~~mi~ 113 (265)
T COG0300 87 VLVNNAGFGTFGPFLELSLDEEEEMIQ 113 (265)
T ss_pred EEEECCCcCCccchhhCChHHHHHHHH
Confidence 67677888888865 35666655544
No 402
>COG1184 GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis]
Probab=55.20 E-value=2.2e+02 Score=28.13 Aligned_cols=96 Identities=8% Similarity=-0.087 Sum_probs=60.8
Q ss_pred ccEEEcCCchhHHHHHHHHHHhhCCCcEEEecC--CCchH--HHHHHHHcCCeEEEEeCCCCCccCHHHHHHHHHcCCCC
Q 011842 159 YWGYITNCGTEGNLHGILVGREVFPDGILYASR--ESHYS--VFKAARMYRMECVKVDCLISGEIDCADFKAKLLQNKDK 234 (476)
Q Consensus 159 ~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~--~~H~S--~~~~~~~~G~~v~~v~~~~~g~~D~~~Le~~l~~~~~~ 234 (476)
...+.|.|-|.+.+..+..+++...+-.||+.+ |.+-. ..+..+..|+++..|+-. ++...+.+-.+
T Consensus 120 g~~IlTh~~S~~v~~~l~~A~~~~k~~~V~VtESRP~~eG~~~ak~L~~~gI~~~~I~Ds--------a~~~~~~~vd~- 190 (301)
T COG1184 120 GDVILTHSFSKTVLEVLKTAADRGKRFKVIVTESRPRGEGRIMAKELRQSGIPVTVIVDS--------AVGAFMSRVDK- 190 (301)
T ss_pred CCEEEEecCcHHHHHHHHHhhhcCCceEEEEEcCCCcchHHHHHHHHHHcCCceEEEech--------HHHHHHHhCCE-
Confidence 458999999999999999998854444666544 33322 345566678888777621 34444544442
Q ss_pred cEEEEEeeCCCccccccC---HHHHHHHHHHhCC
Q 011842 235 PAIINVNIGTTVKGAVDD---LDLVIQTLEESGF 265 (476)
Q Consensus 235 p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~ 265 (476)
+++-..+-...|.+-+ --.|+..|++++.
T Consensus 191 --VivGad~I~~nG~lvnkiGT~~lA~~A~e~~~ 222 (301)
T COG1184 191 --VLVGADAILANGALVNKIGTSPLALAARELRV 222 (301)
T ss_pred --EEECccceecCCcEEeccchHHHHHHHHHhCC
Confidence 4555555444554422 3578888999998
No 403
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=54.60 E-value=57 Score=29.29 Aligned_cols=99 Identities=9% Similarity=0.019 Sum_probs=51.0
Q ss_pred HHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccCHHHHH
Q 011842 146 DWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCADFK 225 (476)
Q Consensus 146 ~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~~~Le 225 (476)
+++.+.++.| .+-..-+..-++.++.-++...++-.++......+.+.....++|+++..++.+ +.++++
T Consensus 46 ~~lr~~~~iP-----VV~I~~s~~Dil~al~~a~~~~~~Iavv~~~~~~~~~~~~~~ll~~~i~~~~~~-----~~~e~~ 115 (176)
T PF06506_consen 46 ELLRKHVSIP-----VVEIPISGFDILRALAKAKKYGPKIAVVGYPNIIPGLESIEELLGVDIKIYPYD-----SEEEIE 115 (176)
T ss_dssp HHHHCC-SS------EEEE---HHHHHHHHHHCCCCTSEEEEEEESS-SCCHHHHHHHHT-EEEEEEES-----SHHHHH
T ss_pred HHHHHhCCCC-----EEEECCCHhHHHHHHHHHHhcCCcEEEEecccccHHHHHHHHHhCCceEEEEEC-----CHHHHH
Confidence 3344445443 333333334455666666543223334444444455788888899999988886 577777
Q ss_pred HHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCC
Q 011842 226 AKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGF 265 (476)
Q Consensus 226 ~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~ 265 (476)
..+.+-...-.=+++ |. .-..++|+++|+
T Consensus 116 ~~i~~~~~~G~~viV--Gg---------~~~~~~A~~~gl 144 (176)
T PF06506_consen 116 AAIKQAKAEGVDVIV--GG---------GVVCRLARKLGL 144 (176)
T ss_dssp HHHHHHHHTT--EEE--ES---------HHHHHHHHHTTS
T ss_pred HHHHHHHHcCCcEEE--CC---------HHHHHHHHHcCC
Confidence 777642110012323 21 124788899998
No 404
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=53.94 E-value=1.1e+02 Score=28.73 Aligned_cols=96 Identities=19% Similarity=0.068 Sum_probs=61.7
Q ss_pred EEEcCCchhHHHHHHHHHHhhC---------C--CcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccCHHHHHHHHH
Q 011842 161 GYITNCGTEGNLHGILVGREVF---------P--DGILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCADFKAKLL 229 (476)
Q Consensus 161 g~~t~ggt~An~~al~aa~~~~---------p--~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~~~Le~~l~ 229 (476)
..+.|||-.+++...++.+.-+ | ++......+++......++.+|+.++....+....-..++|.++|.
T Consensus 4 ~aL~SGGKDS~~Al~~a~~~G~eV~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae~~gi~l~~~~~~g~~e~eve~L~~~l~ 83 (223)
T COG2102 4 IALYSGGKDSFYALYLALEEGHEVVYLLTVKPENGDSYMFHTPNLELAELQAEAMGIPLVTFDTSGEEEREVEELKEALR 83 (223)
T ss_pred EEEEecCcHHHHHHHHHHHcCCeeEEEEEEecCCCCeeeeeccchHHHHHHHHhcCCceEEEecCccchhhHHHHHHHHH
Confidence 5678899999777666654311 0 1112222223334556778889998888876545557788988887
Q ss_pred cCCCCcEEEEEeeCCCccccc---cCHHHHHHHHHHhCC
Q 011842 230 QNKDKPAIINVNIGTTVKGAV---DDLDLVIQTLEESGF 265 (476)
Q Consensus 230 ~~~~~p~~vv~t~gtt~tG~i---d~l~~I~~ia~~~g~ 265 (476)
.-. .-.|+. |++ .-...+-.+|++.|+
T Consensus 84 ~l~--~d~iv~-------GaI~s~yqk~rve~lc~~lGl 113 (223)
T COG2102 84 RLK--VDGIVA-------GAIASEYQKERVERLCEELGL 113 (223)
T ss_pred hCc--ccEEEE-------chhhhHHHHHHHHHHHHHhCC
Confidence 643 113333 666 357788999999998
No 405
>KOG0622 consensus Ornithine decarboxylase [Amino acid transport and metabolism]
Probab=53.12 E-value=2.4e+02 Score=29.15 Aligned_cols=86 Identities=14% Similarity=0.208 Sum_probs=53.0
Q ss_pred CCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEe-eCCCccc--------cccCH
Q 011842 183 PDGILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCADFKAKLLQNKDKPAIINVN-IGTTVKG--------AVDDL 253 (476)
Q Consensus 183 p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t-~gtt~tG--------~id~l 253 (476)
|.-.|+.+..--.|..+-|...|+.+..+. ..+.|++....++..-.++-+. .-++.+| ..+++
T Consensus 123 P~riIyanpcK~~s~IkyAa~~gV~~~tfD-------ne~el~kv~~~hP~a~llLrIatdds~a~~~l~~KFG~~~~~~ 195 (448)
T KOG0622|consen 123 PERIIYANPCKQVSQIKYAAKHGVSVMTFD-------NEEELEKVAKSHPNANLLLRIATDDSTATCRLNLKFGCSLDNC 195 (448)
T ss_pred hHHeEecCCCccHHHHHHHHHcCCeEEeec-------CHHHHHHHHHhCCCceEEEEEccCCCcccccccCccCCCHHHH
Confidence 555677777777888888888888877654 3456666655554433333333 2243444 23678
Q ss_pred HHHHHHHHHhCCCCCceEEEEe
Q 011842 254 DLVIQTLEESGFTQDRFYIHCD 275 (476)
Q Consensus 254 ~~I~~ia~~~g~~~~~~~lhvD 275 (476)
+.|.+.++++++.--.+.+||-
T Consensus 196 ~~lLd~ak~l~lnvvGvsfHvG 217 (448)
T KOG0622|consen 196 RHLLDMAKELELNVVGVSFHVG 217 (448)
T ss_pred HHHHHHHHHcCceEEEEEEEec
Confidence 9999999999872222344443
No 406
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=53.09 E-value=2.5e+02 Score=28.25 Aligned_cols=100 Identities=7% Similarity=-0.019 Sum_probs=56.0
Q ss_pred EEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCch------HHHHHHHHcCCeEEEEeCCCCCccCHHHHHHHHHc---C
Q 011842 161 GYITNCGTEGNLHGILVGREVFPDGILYASRESHY------SVFKAARMYRMECVKVDCLISGEIDCADFKAKLLQ---N 231 (476)
Q Consensus 161 g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~------S~~~~~~~~G~~v~~v~~~~~g~~D~~~Le~~l~~---~ 231 (476)
++-.|||-.+.+++..+.....-...+++-+..+. -+.+.++.+|+....+.++ .+.+...+.. +
T Consensus 63 iV~lSGGkDSs~la~ll~~~~gl~~l~vt~~~~~~~e~~~~n~~~~~~~lgvd~~~i~~d------~~~~~~l~~~~~~~ 136 (343)
T TIGR03573 63 IIGVSGGKDSTYQAHVLKKKLGLNPLLVTVDPGWNTELGVKNLNNLIKKLGFDLHTITIN------PETFRKLQRAYFKK 136 (343)
T ss_pred EEECCCCHHHHHHHHHHHHHhCCceEEEEECCCCCCHHHHHHHHHHHHHcCCCeEEEeCC------HHHHHHHHHHHHhc
Confidence 56679998888876444333211222233333322 2456677789988877764 3333332221 2
Q ss_pred CCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCccc
Q 011842 232 KDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFG 280 (476)
Q Consensus 232 ~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g 280 (476)
...|. .. ........+.++|+++|+ .+++.|..+.
T Consensus 137 ~~~pc--------~~-c~~~~~~~l~~~A~~~gi-----~~Il~G~~~d 171 (343)
T TIGR03573 137 VGDPE--------WP-QDHAIFASVYQVALKFNI-----PLIIWGENIA 171 (343)
T ss_pred cCCCc--------hh-hhhHHHHHHHHHHHHhCC-----CEEEeCCCHH
Confidence 11111 11 112335688899999999 8999887643
No 407
>COG3453 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=49.43 E-value=79 Score=26.70 Aligned_cols=81 Identities=20% Similarity=0.238 Sum_probs=53.6
Q ss_pred CCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCC--ccCHHHHHHHHHcCCCCcEEEEEeeCCCccccc--------cC
Q 011842 183 PDGILYASRESHYSVFKAARMYRMECVKVDCLISG--EIDCADFKAKLLQNKDKPAIINVNIGTTVKGAV--------DD 252 (476)
Q Consensus 183 p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g--~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~i--------d~ 252 (476)
|+.+= -+.+...++..+++.+|+....||+...+ .-|++.+.++|.+.. .|.+..+-+|+-.+-.. .+
T Consensus 37 PDgEe-~~QP~~~~i~~aa~~aGl~y~~iPV~~~~iT~~dV~~f~~Al~eae-gPVlayCrsGtRs~~ly~~~~~~~gm~ 114 (130)
T COG3453 37 PDGEE-PGQPGFAAIAAAAEAAGLTYTHIPVTGGGITEADVEAFQRALDEAE-GPVLAYCRSGTRSLNLYGLGELDGGMS 114 (130)
T ss_pred CCCCC-CCCCChHHHHHHHHhcCCceEEeecCCCCCCHHHHHHHHHHHHHhC-CCEEeeecCCchHHHHHHHHHHhcCCC
Confidence 54433 55677788999999999999999986322 246666777787654 47777776664332211 34
Q ss_pred HHHHHHHHHHhCC
Q 011842 253 LDLVIQTLEESGF 265 (476)
Q Consensus 253 l~~I~~ia~~~g~ 265 (476)
.++|..+.+.+|+
T Consensus 115 ~de~~a~g~a~G~ 127 (130)
T COG3453 115 RDEIEALGQAAGF 127 (130)
T ss_pred HHHHHHHHHhhCc
Confidence 5666777666665
No 408
>cd05126 Mth938 Mth938 domain. Mth938 is a hypothetical protein encoded by the Methanobacterium thermoautotrophicum (Mth) genome. This protein crystallizes as a dimer, although it is monomeric in solution, with one disulfide bond in each monomer. The function of the protein has not been determined.
Probab=49.05 E-value=59 Score=27.29 Aligned_cols=43 Identities=21% Similarity=0.353 Sum_probs=34.1
Q ss_pred ccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCC
Q 011842 218 EIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGF 265 (476)
Q Consensus 218 ~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~ 265 (476)
.+++++|++.|..... +|++ ||...+...+-.++.+.++++|+
T Consensus 45 ~l~~~~l~~ll~~~pe---ivli--GTG~~~~~~~~~~~~~~l~~~Gi 87 (117)
T cd05126 45 GLQPEELEELLEEGVE---VIVI--GTGQSGALKVPPETVEKLEKRGV 87 (117)
T ss_pred cCCHHHHHHHHhcCCC---EEEE--cCCCCccccCCHHHHHHHHhcCC
Confidence 5899999999987654 6666 77777776656788889999998
No 409
>COG0616 SppA Periplasmic serine proteases (ClpP class) [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=48.60 E-value=1.7e+02 Score=29.20 Aligned_cols=90 Identities=16% Similarity=0.155 Sum_probs=54.8
Q ss_pred ccCHHHHHHHHHc---C-CCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCc-ccccccccccCCCC
Q 011842 218 EIDCADFKAKLLQ---N-KDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGAL-FGLMMPFVKKAPKV 292 (476)
Q Consensus 218 ~~D~~~Le~~l~~---~-~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~-~g~~~~~~~~~~~~ 292 (476)
.++.+.+++.|++ + .-++.++.+++|- |.+-.-+.|++..+++...+ .+++.|++.- +|+++-.
T Consensus 79 ~~~~~~~~~~l~~~~~~~~vk~vvL~inSPG---G~v~as~~i~~~l~~l~~~~-PV~v~v~~~AASGGY~IA------- 147 (317)
T COG0616 79 FIGGDDIEEILRAARADPSVKAVVLRINSPG---GSVVASELIARALKRLRAKK-PVVVSVGGYAASGGYYIA------- 147 (317)
T ss_pred cccHHHHHHHHHHHhcCCCCceEEEEEECcC---CchhHHHHHHHHHHHHhhcC-CEEEEECCeecchhhhhh-------
Confidence 3466666666643 2 2355677777665 55555555555555544322 3478777653 3443321
Q ss_pred CCcccccEEEEcCCCCCCCCCCceeEEeehhh
Q 011842 293 SFKKPIGSVSVSGHKFVGCPMPCGVQITRMEH 324 (476)
Q Consensus 293 ~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~ 324 (476)
..+|-|..+++-..|. +|++......
T Consensus 148 ---~aAd~I~a~p~si~GS---IGVi~~~~~~ 173 (317)
T COG0616 148 ---LAADKIVADPSSITGS---IGVISGAPNF 173 (317)
T ss_pred ---ccCCEEEecCCceeee---ceeEEecCCH
Confidence 1279999999999884 8888887654
No 410
>cd01455 vWA_F11C1-5a_type Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A
Probab=45.80 E-value=55 Score=30.07 Aligned_cols=37 Identities=8% Similarity=-0.068 Sum_probs=31.0
Q ss_pred EEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecC
Q 011842 236 AIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGA 277 (476)
Q Consensus 236 ~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a 277 (476)
++|++|-|.+..|.++|++.-+++++++|+ .+|+=++
T Consensus 114 vvILLTDG~n~~~~i~P~~aAa~lA~~~gV-----~iytIgi 150 (191)
T cd01455 114 IVIVLSDANLERYGIQPKKLADALAREPNV-----NAFVIFI 150 (191)
T ss_pred EEEEEeCCCcCCCCCChHHHHHHHHHhCCC-----EEEEEEe
Confidence 688899999889999998878899999999 6665443
No 411
>PRK02289 4-oxalocrotonate tautomerase; Provisional
Probab=44.63 E-value=55 Score=23.58 Aligned_cols=48 Identities=10% Similarity=0.103 Sum_probs=36.8
Q ss_pred EEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccCCcc
Q 011842 422 IAHVVVMPNVTIDKLDDFLNELIENRSTWYEDGKRQPPCIAADIGSEN 469 (476)
Q Consensus 422 ~lRv~~~~~~T~edid~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (476)
.+++.+.+..|.|+..++.+++.++..+.+.........+-.|+-.+|
T Consensus 3 ~i~i~~~~Grs~EqK~~L~~~it~a~~~~~~~p~~~v~V~i~ev~~~~ 50 (60)
T PRK02289 3 FVRIDLFEGRSQEQKNALAREVTEVVSRIAKAPKEAIHVFINDMPEGT 50 (60)
T ss_pred EEEEEECCCCCHHHHHHHHHHHHHHHHHHhCcCcceEEEEEEEeChhh
Confidence 468888889999999999999999998887655544455556655444
No 412
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=43.39 E-value=22 Score=38.70 Aligned_cols=77 Identities=9% Similarity=-0.092 Sum_probs=50.8
Q ss_pred EeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCcccccEEEEcCCCCCCCCCCceeEE
Q 011842 240 VNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKPIGSVSVSGHKFVGCPMPCGVQI 319 (476)
Q Consensus 240 ~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~ 319 (476)
.-++++..|.-++++++++-|+++|+ -|++|-+++.+-- ...+...++.... .=--+..|....||+.++..
T Consensus 203 ~yAp~sryGtPedfk~fVD~aH~~GI-----gViLD~V~~HF~~-d~~~L~~fdg~~~--~e~~~~~~~~~~~Wg~~i~~ 274 (628)
T COG0296 203 YYAPTSRYGTPEDFKALVDAAHQAGI-----GVILDWVPNHFPP-DGNYLARFDGTFL--YEHEDPRRGEHTDWGTAIFN 274 (628)
T ss_pred eccccccCCCHHHHHHHHHHHHHcCC-----EEEEEecCCcCCC-CcchhhhcCCccc--cccCCcccccCCCcccchhc
Confidence 33688899999999999999999999 9999999875422 1112212222110 00012236677799998887
Q ss_pred e-ehhh
Q 011842 320 T-RMEH 324 (476)
Q Consensus 320 ~-~~~~ 324 (476)
. +++.
T Consensus 275 ~gr~EV 280 (628)
T COG0296 275 YGRNEV 280 (628)
T ss_pred cCcHHH
Confidence 7 6653
No 413
>COG1954 GlpP Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]
Probab=38.11 E-value=67 Score=28.86 Aligned_cols=50 Identities=18% Similarity=0.260 Sum_probs=37.2
Q ss_pred CHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCccc
Q 011842 220 DCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFG 280 (476)
Q Consensus 220 D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g 280 (476)
|..+|+++++.+.. ++++- +|.+-.++++.+.++++|- ..++|+|=+.|.
T Consensus 12 ~~~~le~~les~~~---~vflL-----~~~i~~ik~ivk~lK~~gK---~vfiHvDLv~Gl 61 (181)
T COG1954 12 DNKDLEKALESESQ---YVFLL-----TGHILNIKEIVKKLKNRGK---TVFIHVDLVEGL 61 (181)
T ss_pred hHHHHHHHhcCCCe---EEEEE-----echhhhHHHHHHHHHhCCc---EEEEEeHHhccc
Confidence 67789999986654 33332 2678999999999999874 348999977653
No 414
>cd01018 ZntC Metal binding protein ZntC. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and bind their specific ligands in the cleft between these domains. In addition, many of these proteins possess a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=37.52 E-value=2.1e+02 Score=27.44 Aligned_cols=70 Identities=16% Similarity=0.044 Sum_probs=41.3
Q ss_pred CCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccCHHHHHHH---HHcCCCCcEEEEEeeCCCccccccCHHHHHHH
Q 011842 183 PDGILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCADFKAK---LLQNKDKPAIINVNIGTTVKGAVDDLDLVIQT 259 (476)
Q Consensus 183 p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~~~Le~~---l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~i 259 (476)
++..+++ .|.++...++.+|+++..+.. ++....+.+|.+. +++..- .+|+.. +.... +.+-.+
T Consensus 169 ~~~~~v~---~H~af~Y~~~~ygl~~~~~~~-~~~eps~~~l~~l~~~ik~~~v--~~if~e-~~~~~------~~~~~l 235 (266)
T cd01018 169 KQRAFMV---YHPAWGYFARDYGLTQIPIEE-EGKEPSPADLKRLIDLAKEKGV--RVVFVQ-PQFST------KSAEAI 235 (266)
T ss_pred CCCeEEE---ECchhHHHHHHcCCEEEecCC-CCCCCCHHHHHHHHHHHHHcCC--CEEEEc-CCCCc------HHHHHH
Confidence 4444555 677888899999999876532 3445655555554 444321 244443 32222 344477
Q ss_pred HHHhCC
Q 011842 260 LEESGF 265 (476)
Q Consensus 260 a~~~g~ 265 (476)
+++.|+
T Consensus 236 a~~~g~ 241 (266)
T cd01018 236 AREIGA 241 (266)
T ss_pred HHHcCC
Confidence 888898
No 415
>TIGR01244 conserved hypothetical protein TIGR01244. No member of this family is characterized. The member from Xylella fastidiosa is a longer protein with an N-terminal region described by this model, followed by a metallo-beta-lactamase family domain and an additional C-terminal region. Members scoring above the trusted cutoff are limited to the proteobacteria.
Probab=37.42 E-value=1.7e+02 Score=24.90 Aligned_cols=67 Identities=13% Similarity=0.242 Sum_probs=47.3
Q ss_pred HHHHHHHHcCCeEEEEeCCCCCccC---HHHHHHHHHcCCCCcEEEEEeeCCCccccc---------cCHHHHHHHHHHh
Q 011842 196 SVFKAARMYRMECVKVDCLISGEID---CADFKAKLLQNKDKPAIINVNIGTTVKGAV---------DDLDLVIQTLEES 263 (476)
Q Consensus 196 S~~~~~~~~G~~v~~v~~~~~g~~D---~~~Le~~l~~~~~~p~~vv~t~gtt~tG~i---------d~l~~I~~ia~~~ 263 (476)
.....+...|++.+.+|+... .++ ++.+.+.+.. ...|+++.+.+|. -+|.. -+.++|.+.+++.
T Consensus 48 ~~~~~a~~~gl~y~~iPv~~~-~~~~~~v~~f~~~~~~-~~~pvL~HC~sG~-Rt~~l~al~~~~~g~~~~~i~~~~~~~ 124 (135)
T TIGR01244 48 QIKAAAEAAGVTYHHQPVTAG-DITPDDVETFRAAIGA-AEGPVLAYCRSGT-RSSLLWGFRQAAEGVPVEEIVRRAQAA 124 (135)
T ss_pred HHHHHHHHCCCeEEEeecCCC-CCCHHHHHHHHHHHHh-CCCCEEEEcCCCh-HHHHHHHHHHHHcCCCHHHHHHHHHHc
Confidence 334566778999999998643 354 4455555654 3478899888887 66663 4678899999988
Q ss_pred CC
Q 011842 264 GF 265 (476)
Q Consensus 264 g~ 265 (476)
|.
T Consensus 125 G~ 126 (135)
T TIGR01244 125 GY 126 (135)
T ss_pred CC
Confidence 76
No 416
>cd00248 Mth938-like Mth938-like domain. The members of this family include: Mth938, 2P1, Xcr35, Rpa2829, and several uncharacterized sequences. Mth938 is a hypothetical protein encoded by the Methanobacterium thermoautotrophicum (Mth) genome. This protein crystallizes as a dimer, although it is monomeric in solution, with one disulfide bond in each monomer. 2P1 is a partially characterized nuclear protein which is homologous to E3-3 from rat and known to be alternately spliced. Xcr35 and Rpa2829 are hypothetical proteins of unknown function from the Xanthomonas campestris and Rhodopseudomonas palustris genomes, respectively, for which the crystal structures have been determined.
Probab=36.60 E-value=1.4e+02 Score=24.52 Aligned_cols=44 Identities=20% Similarity=0.314 Sum_probs=32.9
Q ss_pred CccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCC
Q 011842 217 GEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGF 265 (476)
Q Consensus 217 g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~ 265 (476)
..++.++|+..+..+ .|-++++ ||..++.. +-+++.+.++++|+
T Consensus 37 ~~l~~~~l~~~~~~~--~peilii--GTG~~~~~-~~~~~~~~l~~~gI 80 (109)
T cd00248 37 SDLDPEALLPLLAED--RPDILLI--GTGAEIAF-LPRALRAALRAAGI 80 (109)
T ss_pred ccCCHHHHHHHHhhC--CCCEEEE--cCCCCCCc-CCHHHHHHHHHcCC
Confidence 368999999998876 3446666 66666644 44788999999998
No 417
>TIGR03679 arCOG00187 arCOG00187 universal archaeal metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein. This model has the same scope as an archaeal COG (arCOG00187) and is found in all completely sequenced archaea and does not recognize any known non-archaeal genes.
Probab=34.19 E-value=3.5e+02 Score=25.24 Aligned_cols=97 Identities=16% Similarity=0.083 Sum_probs=49.2
Q ss_pred EEcCCchhHHHHHHHHHHhhCCCcEE-E-e--cC---------CCchHHHHHHHHcCCeEEEEeCCCCCccCHHHHHHHH
Q 011842 162 YITNCGTEGNLHGILVGREVFPDGIL-Y-A--SR---------ESHYSVFKAARMYRMECVKVDCLISGEIDCADFKAKL 228 (476)
Q Consensus 162 ~~t~ggt~An~~al~aa~~~~p~~~V-l-~--s~---------~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~~~Le~~l 228 (476)
+..|||-.+.+.+.++... ..+++ + + +. ..+......++.+|+....++++.......+.|.+++
T Consensus 2 vl~SGGkDS~~al~~a~~~--G~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~A~~lgip~~~i~~~~~~~~~~~~l~~~l 79 (218)
T TIGR03679 2 ALYSGGKDSNYALYKALEE--GHEVRCLITVVPENEESYMFHTPNIELTRLQAEALGIPLVKIETSGEKEKEVEDLKGAL 79 (218)
T ss_pred eeecCcHHHHHHHHHHHHc--CCEEEEEEEeccCCCCccccCCCCHHHHHHHHHHhCCCEEEEECCCCChHHHHHHHHHH
Confidence 4678999998877665542 22221 2 2 11 1123345677888988877776522223334455555
Q ss_pred HcCC--CCcEEEEEeeCCCccccccCHHHHHHHHHHhCC
Q 011842 229 LQNK--DKPAIINVNIGTTVKGAVDDLDLVIQTLEESGF 265 (476)
Q Consensus 229 ~~~~--~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~ 265 (476)
.+-. .. ..|+. |+... -.+-..+-.+|++.|+
T Consensus 80 ~~~~~~g~-~~vv~--G~i~s--d~~~~~~e~v~~~~gl 113 (218)
T TIGR03679 80 KELKREGV-EGIVT--GAIAS--RYQKSRIERICEELGL 113 (218)
T ss_pred HHHHHcCC-CEEEE--CCccc--HhHHHHHHHHHHhCCC
Confidence 3321 11 12222 33222 1234455577777777
No 418
>PLN02672 methionine S-methyltransferase
Probab=33.73 E-value=8.5e+02 Score=28.85 Aligned_cols=131 Identities=7% Similarity=-0.004 Sum_probs=77.6
Q ss_pred cchhhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEE---ecCCCchHHHHHHHHcCC---
Q 011842 133 YGVHSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILY---ASRESHYSVFKAARMYRM--- 206 (476)
Q Consensus 133 ~~~~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl---~s~~~H~S~~~~~~~~G~--- 206 (476)
.+.+...++..+..+|..+.+++-.+..+++.++-..|+-.+++..- |...++ .+..-+..|..+...-|.
T Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (1082)
T PLN02672 424 PPAGSKRFRNLIAGFMRIYHHIPLTPDNVVVFPSRAVAIENALRLFS---PRLAIVDEHLTRWLPKKWLTSLAIENATSD 500 (1082)
T ss_pred CCccchHHHHHHHHHHHHhcCCcCCccceEEeccHHHHHHHHHHhhC---hHHHhhhhhhhccCCHHHHhHhhhhccccc
Confidence 34478899999999999999998666678999998888855554321 110000 222233345444433331
Q ss_pred -----eEEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecC
Q 011842 207 -----ECVKVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGA 277 (476)
Q Consensus 207 -----~v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a 277 (476)
.+..+.. +. .-+.+.+.|.+- +|.+|+.+......-+..-++.|.+.+++.|. |++.|..
T Consensus 501 ~~~~~~~~~~~~-~~---~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 565 (1082)
T PLN02672 501 SKSDDVITVIEA-PR---QSDLVIELIKKL--KPQVVVTGMADFEMRTSTAFEHLLNVTAEIGA-----RLFLDIS 565 (1082)
T ss_pred CccCCeEEEEeC-CC---cchHHHHHHHhC--CCeEEEEeccchhhhhHHHHHHHHHHHHhhCc-----EEEEehh
Confidence 1222221 10 112455555543 34466555443333334557889999999999 9999976
No 419
>TIGR00511 ribulose_e2b2 ribose-1,5-bisphosphate isomerase, e2b2 family. The delineation of this family was based originally, in part, on a discussion and neighbor-joining phylogenetic study by Kyrpides and Woese of archaeal and other proteins homologous to the alpha, beta, and delta subunits of eukaryotic initiation factor 2B (eIF-2B), a five-subunit molecule that catalyzes GTP recycling for eIF-2. Recently, Sato, et al. assigned the function ribulose-1,5 bisphosphate isomerase.
Probab=32.25 E-value=5e+02 Score=25.59 Aligned_cols=95 Identities=16% Similarity=0.069 Sum_probs=53.5
Q ss_pred cEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCc--hH--HHHHHHHcCCeEEEEeCCCCCccCHHHHHHHHHcCCCCc
Q 011842 160 WGYITNCGTEGNLHGILVGREVFPDGILYASRESH--YS--VFKAARMYRMECVKVDCLISGEIDCADFKAKLLQNKDKP 235 (476)
Q Consensus 160 ~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H--~S--~~~~~~~~G~~v~~v~~~~~g~~D~~~Le~~l~~~~~~p 235 (476)
..++|.|.|......+..+.+..+.-.|++.+..- .. ..+.....|+.+..++-. .+-..+.+-..
T Consensus 117 ~~ILT~~~S~tv~~~l~~a~~~~~~f~V~v~EsrP~~~G~~~a~~L~~~gI~vtlI~Ds--------a~~~~m~~vd~-- 186 (301)
T TIGR00511 117 DVVMTHCNSEAALSVIKTAFEQGKDIEVIATETRPRKQGHITAKELRDYGIPVTLIVDS--------AVRYFMKEVDH-- 186 (301)
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCcEEEEEecCCCcchHHHHHHHHHHCCCCEEEEehh--------HHHHHHHhCCE--
Confidence 37888887777776666665544555666655432 11 223334458888888632 33334433232
Q ss_pred EEEEEeeCCCcccccc-C--HHHHHHHHHHhCC
Q 011842 236 AIINVNIGTTVKGAVD-D--LDLVIQTLEESGF 265 (476)
Q Consensus 236 ~~vv~t~gtt~tG~id-~--l~~I~~ia~~~g~ 265 (476)
+++....-...|.+- . -..++-+|+.|++
T Consensus 187 -VivGad~v~~nG~v~nkiGT~~lA~~Ak~~~v 218 (301)
T TIGR00511 187 -VVVGADAITANGALINKIGTSQLALAAREARV 218 (301)
T ss_pred -EEECccEEecCCCEEEHHhHHHHHHHHHHhCC
Confidence 343333333445442 2 3577888999998
No 420
>cd00886 MogA_MoaB MogA_MoaB family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF) an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea, and eukaryotes. MoCF contains a tricyclic pyranopterin, termed molybdopterin (MPT). MogA, together with MoeA, is responsible for the metal incorporation into MPT, the third step in MoCF biosynthesis. The plant homolog Cnx1 is a MoeA-MogA fusion protein. The mammalian homolog gephyrin is a MogA-MoeA fusion protein, that plays a critical role in postsynaptic anchoring of inhibitory glycine receptors and major GABAa receptor subtypes. In contrast, MoaB shows high similarity to MogA, but little is known about its physiological role. All well studied members of this family form highly stable trimers.
Probab=32.22 E-value=1.3e+02 Score=26.15 Aligned_cols=60 Identities=15% Similarity=0.118 Sum_probs=35.8
Q ss_pred hHHHHHHHHcCCeEEEEeCCCCCccCHHHHHHHHHcCCC--CcEEEEEeeCCCccccccCHHHHHH
Q 011842 195 YSVFKAARMYRMECVKVDCLISGEIDCADFKAKLLQNKD--KPAIINVNIGTTVKGAVDDLDLVIQ 258 (476)
Q Consensus 195 ~S~~~~~~~~G~~v~~v~~~~~g~~D~~~Le~~l~~~~~--~p~~vv~t~gtt~tG~id~l~~I~~ 258 (476)
+.+...++..|+++..+.+-+| |.+.+++.|.+..+ ..-+| ++.|.+..|..|-..++.+
T Consensus 23 ~~l~~~l~~~G~~v~~~~~v~D---d~~~i~~~l~~~~~~~~~DlV-ittGG~s~g~~D~t~~al~ 84 (152)
T cd00886 23 PALVELLEEAGHEVVAYEIVPD---DKDEIREALIEWADEDGVDLI-LTTGGTGLAPRDVTPEATR 84 (152)
T ss_pred HHHHHHHHHcCCeeeeEEEcCC---CHHHHHHHHHHHHhcCCCCEE-EECCCcCCCCCcCcHHHHH
Confidence 3456667888998777665332 66777776653211 11245 4457777788877655443
No 421
>TIGR00177 molyb_syn molybdenum cofactor synthesis domain. The Drosophila protein cinnamon, the Arabidopsis protein cnx1, and rat protein gephyrin each have one domain like MoeA and one like MoaB and Mog. These domains are, however, distantly related to each other, as captured by this model. Gephyrin is unusual in that it seems to be a tubulin-binding neuroprotein involved in the clustering of both blycine receptors and GABA receptors, rather than a protein of molybdenum cofactor biosynthesis.
Probab=32.03 E-value=1.8e+02 Score=25.03 Aligned_cols=62 Identities=11% Similarity=0.095 Sum_probs=36.8
Q ss_pred CchHHHHHHHHcCCeEEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHH
Q 011842 193 SHYSVFKAARMYRMECVKVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQ 258 (476)
Q Consensus 193 ~H~S~~~~~~~~G~~v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ 258 (476)
.-+.+...++.+|+++..+.+-.| |.+.|.+.|.+.....-+|+.| |.+..|..|-..+..+
T Consensus 28 n~~~l~~~l~~~G~~v~~~~~v~D---d~~~i~~~l~~~~~~~DliItt-GG~g~g~~D~t~~ai~ 89 (144)
T TIGR00177 28 NGPLLAALLEEAGFNVSRLGIVPD---DPEEIREILRKAVDEADVVLTT-GGTGVGPRDVTPEALE 89 (144)
T ss_pred cHHHHHHHHHHCCCeEEEEeecCC---CHHHHHHHHHHHHhCCCEEEEC-CCCCCCCCccHHHHHH
Confidence 344667777888998877665322 5666776665432112255554 6666677776655443
No 422
>cd01020 TroA_b Metal binding protein TroA_b. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=31.95 E-value=2.1e+02 Score=27.42 Aligned_cols=74 Identities=14% Similarity=-0.032 Sum_probs=43.2
Q ss_pred CCcEEEecCCCchHHHHHHHHcCCeEEEEe----CC-CCCccCHHHHHHHHH---cCCCCcEEEEEeeCCCccccccCHH
Q 011842 183 PDGILYASRESHYSVFKAARMYRMECVKVD----CL-ISGEIDCADFKAKLL---QNKDKPAIINVNIGTTVKGAVDDLD 254 (476)
Q Consensus 183 p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~----~~-~~g~~D~~~Le~~l~---~~~~~p~~vv~t~gtt~tG~id~l~ 254 (476)
++..+++ .|.++...++.+|++.+.+. .. ++....+.+|.+.++ +.. . .+|+.+ +.... ...+
T Consensus 152 ~~~~~v~---~H~af~Y~~~~yGl~~~~~~~~~~~~~~~~~ps~~~l~~l~~~ik~~~-v-~~if~e-~~~~~---k~~~ 222 (264)
T cd01020 152 KGAPVAA---TEPVFDYLLDALGMKERTPKGYTATTESETEPSPADIAAFQNAIKNRQ-I-DALIVN-PQQAS---SATT 222 (264)
T ss_pred CCCeEEE---eCchHHHHHHHCCCcccCHHHHHhhhcCCCCCCHHHHHHHHHHHHhCC-C-CEEEeC-CCCCc---HHHH
Confidence 4444555 68899999999999866321 11 245566666666554 332 1 244343 32111 2345
Q ss_pred HHHHHHHHhCC
Q 011842 255 LVIQTLEESGF 265 (476)
Q Consensus 255 ~I~~ia~~~g~ 265 (476)
.|..++++.|+
T Consensus 223 ~l~~la~~~~~ 233 (264)
T cd01020 223 NITGLAKRSGV 233 (264)
T ss_pred HHHHHHHHcCC
Confidence 56678999998
No 423
>TIGR02717 AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP forming), alpha domain. Although technically reversible, it is believed that this group of ADP-dependent acetyl-CoA synthetases (ACS) act in the direction of acetate and ATP production in the organisms in which it has been characterized. In most species this protein exists as a fused alpha-beta domain polypeptide. In Pyrococcus and related species, however the domains exist as separate polypeptides. This model represents the alpha (N-terminal) domain. In Pyrococcus and related species there appears to have been the development of a paralogous family such that four other proteins are close relatives. In reference, one of these (along with its beta-domain partner) was characterized as ACS-II showing specificity for phenylacetyl-CoA. This model has been constructed to exclude these non-ACS-I paralogs. This may result in new, authentic ACS-I sequences falling below the trusted cutoff.
Probab=31.39 E-value=1.3e+02 Score=31.64 Aligned_cols=52 Identities=8% Similarity=-0.005 Sum_probs=35.1
Q ss_pred CHHHHHHHHHcCCCCcEEEEEeeCCCccccc--cCHHHHHHHHHHhCCCCCceEEEEecCc
Q 011842 220 DCADFKAKLLQNKDKPAIINVNIGTTVKGAV--DDLDLVIQTLEESGFTQDRFYIHCDGAL 278 (476)
Q Consensus 220 D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~i--d~l~~I~~ia~~~g~~~~~~~lhvD~a~ 278 (476)
-++.+++..+... ..+++++.|....|.- ..-++|.++|+++|+ .++--.+.
T Consensus 77 ~~~~l~e~~~~gv--~~~vi~s~gf~e~g~~g~~~~~~l~~~a~~~gi-----rvlGPnc~ 130 (447)
T TIGR02717 77 VPQVVEECGEKGV--KGAVVITAGFKEVGEEGAELEQELVEIARKYGM-----RLLGPNCL 130 (447)
T ss_pred HHHHHHHHHhcCC--CEEEEECCCccccCcchHHHHHHHHHHHHHcCC-----EEEecCee
Confidence 3456666665443 3578888888777741 223789999999999 77655554
No 424
>cd01017 AdcA Metal binding protein AcdA. These proteins have been shown to function in the ABC uptake of Zn2+ and Mn2+ and in competence for genetic transformation and adhesion. The AcdA proteins belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and they bind their ligand in the cleft between these domains. In addition, many of these proteins have a low complexity region containing metal binding histidine-rich motif (repetitive HDH sequence).
Probab=30.85 E-value=2.9e+02 Score=26.71 Aligned_cols=71 Identities=11% Similarity=0.061 Sum_probs=41.4
Q ss_pred CCcEEEecCCCchHHHHHHHHcCCeEEEEe-CCCCCccCHHHHHHHHH---cCCCCcEEEEEeeCCCccccccCHHHHHH
Q 011842 183 PDGILYASRESHYSVFKAARMYRMECVKVD-CLISGEIDCADFKAKLL---QNKDKPAIINVNIGTTVKGAVDDLDLVIQ 258 (476)
Q Consensus 183 p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~-~~~~g~~D~~~Le~~l~---~~~~~p~~vv~t~gtt~tG~id~l~~I~~ 258 (476)
++..+++ .|.++...++.+|+++..+. ..++....+.+|.+.++ ++. . .+|+.. +.... +.+-.
T Consensus 170 ~~~~~v~---~H~af~Y~~~~~gl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~-v-~~if~e-~~~~~------~~~~~ 237 (282)
T cd01017 170 KGKTFVT---QHAAFGYLARRYGLKQIAIVGVSPEVEPSPKQLAELVEFVKKSD-V-KYIFFE-ENASS------KIAET 237 (282)
T ss_pred CCCeEEE---ecccHHHHHHHCCCeEEecccCCCCCCCCHHHHHHHHHHHHHcC-C-CEEEEe-CCCCh------HHHHH
Confidence 3444555 67788888999999877643 23344566666666554 332 1 244443 32222 34455
Q ss_pred HHHHhCC
Q 011842 259 TLEESGF 265 (476)
Q Consensus 259 ia~~~g~ 265 (476)
++++.|+
T Consensus 238 la~~~g~ 244 (282)
T cd01017 238 LAKETGA 244 (282)
T ss_pred HHHHcCC
Confidence 7888887
No 425
>PF01008 IF-2B: Initiation factor 2 subunit family; InterPro: IPR000649 Initiation factor 2 binds to Met-tRNA, GTP and the small ribosomal subunit. The eukaryotic translation initiation factor EIF-2B is a complex made up of five different subunits, alpha, beta, gamma, delta and epsilon, and catalyses the exchange of EIF-2-bound GDP for GTP. This family includes initiation factor 2B alpha, beta and delta subunits from eukaryotes; related proteins from archaebacteria and IF-2 from prokaryotes and also contains a subfamily of proteins in eukaryotes, archaeae (e.g. Pyrococcus furiosus), or eubacteria such as Bacillus subtilis and Thermotoga maritima. Many of these proteins were initially annotated as putative translation initiation factors despite the fact that there is no evidence for the requirement of an IF2 recycling factor in prokaryotic translation initiation. Recently, one of these proteins from B. subtilis has been functionally characterised as a 5-methylthioribose-1-phosphate isomerase (MTNA) []. This enzyme participates in the methionine salvage pathway catalysing the isomerisation of 5-methylthioribose-1-phosphate to 5-methylthioribulose-1-phosphate []. The methionine salvage pathway leads to the synthesis of methionine from methylthioadenosine, the end product of the spermidine and spermine anabolism in many species.; GO: 0044237 cellular metabolic process; PDB: 1VB5_A 1T5O_D 3A11_E 3VM6_C 1W2W_A 1T9K_A 3ECS_B 2YRF_A 2YVK_B 2A0U_A ....
Probab=30.82 E-value=2.9e+02 Score=26.66 Aligned_cols=101 Identities=8% Similarity=-0.070 Sum_probs=53.3
Q ss_pred cEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCch--H--HHHHHHHcCCeEEEEeCCCCCccCHHHHHHHHHcCCCCc
Q 011842 160 WGYITNCGTEGNLHGILVGREVFPDGILYASRESHY--S--VFKAARMYRMECVKVDCLISGEIDCADFKAKLLQNKDKP 235 (476)
Q Consensus 160 ~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~--S--~~~~~~~~G~~v~~v~~~~~g~~D~~~Le~~l~~~~~~p 235 (476)
..++|.|-+......+..+....++-.|++.+.... . +.+...-.|+++..++-. .+-..+..+..
T Consensus 109 ~~ILT~~~S~~v~~~l~~a~~~~~~~~V~v~es~P~~eG~~~a~~L~~~gi~v~~i~d~--------~~~~~m~~~vd-- 178 (282)
T PF01008_consen 109 DTILTHGYSSTVERFLLSAKKKGKKFRVIVLESRPYNEGRLMAKELAEAGIPVTLIPDS--------AVGYVMPRDVD-- 178 (282)
T ss_dssp EEEEEES--SHHHHHHHHHHHTTEEEEEEEE--TTTTHHHTHHHHHHHTT-EEEEE-GG--------GHHHHHHCTES--
T ss_pred eEEEEeCCchHHHHHHHHHHHcCCeEEEEEccCCcchhhhhHHHHhhhcceeEEEEech--------HHHHHHHHhCC--
Confidence 478888888888888877776444556666654321 1 223333458898888742 34444544122
Q ss_pred EEEEEeeCCCccccc-cC--HHHHHHHHHHhCCCCCceEEEEe
Q 011842 236 AIINVNIGTTVKGAV-DD--LDLVIQTLEESGFTQDRFYIHCD 275 (476)
Q Consensus 236 ~~vv~t~gtt~tG~i-d~--l~~I~~ia~~~g~~~~~~~lhvD 275 (476)
.+++....-...|.+ .. -..|+-+|+++++ .++|=
T Consensus 179 ~VliGad~v~~nG~v~nk~Gt~~~a~~Ak~~~v-----Pv~v~ 216 (282)
T PF01008_consen 179 KVLIGADAVLANGGVVNKVGTLQLALAAKEFNV-----PVYVL 216 (282)
T ss_dssp EEEEE-SEEETTS-EEEETTHHHHHHHHHHTT------EEEEE
T ss_pred eeEEeeeEEecCCCEeehhhHHHHHHHHHhhCC-----CEEEE
Confidence 244443334444544 22 4678888999998 66553
No 426
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=30.55 E-value=2.9e+02 Score=22.37 Aligned_cols=72 Identities=11% Similarity=0.170 Sum_probs=45.9
Q ss_pred HHHHHHHcCCeEEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEec
Q 011842 197 VFKAARMYRMECVKVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDG 276 (476)
Q Consensus 197 ~~~~~~~~G~~v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~ 276 (476)
+...++..|.++..+..+ .+.+++.+.+.+. +|-+|.++.. .+.......++++..|+.+- ++.+++=|
T Consensus 20 la~~l~~~G~~v~~~d~~----~~~~~l~~~~~~~--~pd~V~iS~~--~~~~~~~~~~l~~~~k~~~p---~~~iv~GG 88 (121)
T PF02310_consen 20 LAAYLRKAGHEVDILDAN----VPPEELVEALRAE--RPDVVGISVS--MTPNLPEAKRLARAIKERNP---NIPIVVGG 88 (121)
T ss_dssp HHHHHHHTTBEEEEEESS----B-HHHHHHHHHHT--TCSEEEEEES--SSTHHHHHHHHHHHHHTTCT---TSEEEEEE
T ss_pred HHHHHHHCCCeEEEECCC----CCHHHHHHHHhcC--CCcEEEEEcc--CcCcHHHHHHHHHHHHhcCC---CCEEEEEC
Confidence 344556668899888664 3558888877665 3446766543 33456667888888777632 23888777
Q ss_pred Ccc
Q 011842 277 ALF 279 (476)
Q Consensus 277 a~~ 279 (476)
.+.
T Consensus 89 ~~~ 91 (121)
T PF02310_consen 89 PHA 91 (121)
T ss_dssp SSS
T ss_pred Cch
Confidence 764
No 427
>cd05560 Xcc1710_like Xcc1710_like family, specific to proteobacteria. Xcc1710 is a hypothetical protein from Xanthomonas campestris pv. campestris str. ATCC 33913, similar to Mth938, a hypothetical protein encoded by the Methanobacterium thermoautotrophicum (Mth) genome. Their three-dimensional structures have been determined, but their functions are unknown.
Probab=30.21 E-value=1.9e+02 Score=23.76 Aligned_cols=42 Identities=21% Similarity=0.353 Sum_probs=32.0
Q ss_pred ccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCC
Q 011842 218 EIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGF 265 (476)
Q Consensus 218 ~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~ 265 (476)
.++.++|+..+..... ++++ ||..++...| +++.+.++++|+
T Consensus 39 ~l~~e~l~~l~~~~pe---ilii--GTG~~~~~~~-~~~~~~l~~~gi 80 (109)
T cd05560 39 DLTAAHFEALLALQPE---VILL--GTGERQRFPP-PALLAPLLARGI 80 (109)
T ss_pred cCCHHHHHHHHhcCCC---EEEE--ecCCCCCcCC-HHHHHHHHHcCC
Confidence 6789999998876543 6666 6666666665 788888999998
No 428
>PLN03244 alpha-amylase; Provisional
Probab=30.12 E-value=1.1e+02 Score=34.54 Aligned_cols=35 Identities=14% Similarity=0.156 Sum_probs=30.1
Q ss_pred eCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccc
Q 011842 242 IGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGL 281 (476)
Q Consensus 242 ~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~ 281 (476)
++++..|..++++++++.|++.|+ -|+.|-+++.+
T Consensus 432 ApssRYGTPeDLK~LVD~aH~~GI-----~VILDvV~NH~ 466 (872)
T PLN03244 432 AASSRYGTPDDFKRLVDEAHGLGL-----LVFLDIVHSYA 466 (872)
T ss_pred ccCcccCCHHHHHHHHHHHHHCCC-----EEEEEecCccC
Confidence 455667888999999999999999 99999998644
No 429
>TIGR01536 asn_synth_AEB asparagine synthase (glutamine-hydrolyzing). This model describes the glutamine-hydrolysing asparagine synthase. A poorly conserved C-terminal extension was removed from the model. Bacterial members of the family tend to have a long, poorly conserved insert lacking from archaeal and eukaryotic sequences. Multiple isozymes have been demonstrated, such as in Bacillus subtilis. Long-branch members of the phylogenetic tree (which typically were also second or third candidate members from their genomes) were removed from the seed alignment and score below trusted cutoff.
Probab=29.24 E-value=5.2e+02 Score=27.07 Aligned_cols=120 Identities=17% Similarity=0.103 Sum_probs=65.0
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhC-CCcEEE---ec-CCCch---HHHHHHHHcCCeEEE
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVF-PDGILY---AS-RESHY---SVFKAARMYRMECVK 210 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~-p~~~Vl---~s-~~~H~---S~~~~~~~~G~~v~~ 210 (476)
++++.+.+.+.+.+..+. ..+++.|||-.+...+..+.+... .....+ .+ ..... ...+.++.+|.+...
T Consensus 237 ~l~~~l~~aV~~r~~~~~--~vg~~LSGGlDSs~iaa~a~~~~~~~~~~~~t~~~~~~~~~~E~~~A~~vA~~lg~~~~~ 314 (467)
T TIGR01536 237 ELRSLLEDAVKRRLVADV--PVGVLLSGGLDSSLVAAIARREAPRGPVHTFSIGFEGSPDFDESPYARKVADHLGTEHHE 314 (467)
T ss_pred HHHHHHHHHHHHHhccCC--ceEEEecCChhHHHHHHHHHHhcCCCCceEEEEecCCCCCCChHHHHHHHHHHhCCcCeE
Confidence 455555555555543332 348899999988877665544321 122222 22 11222 345677888998877
Q ss_pred EeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecC
Q 011842 211 VDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGA 277 (476)
Q Consensus 211 v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a 277 (476)
+..+++. -.+.+.+.+.... .| ... ....+...+.+.++++|+ -++.+|-
T Consensus 315 i~~~~~~--~~~~~~~~v~~~~-~p--------~~~-~~~~~~~~l~~~a~~~G~-----~vlltG~ 364 (467)
T TIGR01536 315 VLFSVEE--GLDALPEVIYHLE-DP--------TTI-RASIPLYLLSKLAREDGV-----KVVLSGE 364 (467)
T ss_pred EECCHHH--HHHHHHHHHHhhC-CC--------CCC-chHHHHHHHHHHHHhcCC-----EEEEecC
Confidence 7664211 1223444443221 22 111 122355678889999998 7777765
No 430
>PF01297 TroA: Periplasmic solute binding protein family; InterPro: IPR006127 This is a family of ABC transporter metal-binding lipoproteins. An example is the periplasmic zinc-binding protein TroA P96116 from SWISSPROT that interacts with an ATP-binding cassette transport system in Treponema pallidum and plays a role in the transport of zinc across the cytoplasmic membrane. Related proteins are found in both Gram-positive and Gram-negative bacteria. ; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2PS9_A 2PS0_A 2OSV_A 2OGW_A 2PS3_A 2PRS_B 3MFQ_C 3GI1_B 2OV3_A 1PQ4_A ....
Probab=29.06 E-value=1.5e+02 Score=28.20 Aligned_cols=71 Identities=18% Similarity=0.127 Sum_probs=40.1
Q ss_pred CCcEEEecCCCchHHHHHHHHcCCeEEEEe-CCCCCccCHHHHHHHH---HcCCCCcEEEEEeeCCCccccccCHHHHHH
Q 011842 183 PDGILYASRESHYSVFKAARMYRMECVKVD-CLISGEIDCADFKAKL---LQNKDKPAIINVNIGTTVKGAVDDLDLVIQ 258 (476)
Q Consensus 183 p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~-~~~~g~~D~~~Le~~l---~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ 258 (476)
++..+++ .|.++...++.+|+++..+- ..++....+.+|.+.+ +++.- .+|+.+ +.... +.+-.
T Consensus 149 ~~~~~v~---~h~~~~Y~~~~~gl~~~~~~~~~~~~~ps~~~l~~l~~~ik~~~v--~~i~~e-~~~~~------~~~~~ 216 (256)
T PF01297_consen 149 PGRPVVV---YHDAFQYFAKRYGLKVIGVIEISPGEEPSPKDLAELIKLIKENKV--KCIFTE-PQFSS------KLAEA 216 (256)
T ss_dssp SGGEEEE---EESTTHHHHHHTT-EEEEEESSSSSSSS-HHHHHHHHHHHHHTT---SEEEEE-TTS-T------HHHHH
T ss_pred cCCeEEE---EChHHHHHHHhcCCceeeeeccccccCCCHHHHHHHHHHhhhcCC--cEEEec-CCCCh------HHHHH
Confidence 4556666 67778888999999877665 3445566666666655 44321 144443 32222 34555
Q ss_pred HHHHhCC
Q 011842 259 TLEESGF 265 (476)
Q Consensus 259 ia~~~g~ 265 (476)
++++.|+
T Consensus 217 la~~~g~ 223 (256)
T PF01297_consen 217 LAKETGV 223 (256)
T ss_dssp HHHCCT-
T ss_pred HHHHcCC
Confidence 6888888
No 431
>PRK08535 translation initiation factor IF-2B subunit delta; Provisional
Probab=29.00 E-value=5.8e+02 Score=25.27 Aligned_cols=94 Identities=15% Similarity=0.089 Sum_probs=53.8
Q ss_pred EEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCch--H--HHHHHHHcCCeEEEEeCCCCCccCHHHHHHHHHcCCCCcE
Q 011842 161 GYITNCGTEGNLHGILVGREVFPDGILYASRESHY--S--VFKAARMYRMECVKVDCLISGEIDCADFKAKLLQNKDKPA 236 (476)
Q Consensus 161 g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~--S--~~~~~~~~G~~v~~v~~~~~g~~D~~~Le~~l~~~~~~p~ 236 (476)
.++|.|.|......+..+.+..++..|++.+..-. . ..+-....|+++..++-+ .+-..+.+-..
T Consensus 123 ~ILT~~~S~tv~~~l~~A~~~~k~~~V~v~EsrP~~~G~~~a~~L~~~GI~vtlI~Ds--------av~~~m~~vd~--- 191 (310)
T PRK08535 123 VIMTHCNSSAALSVIKTAHEQGKDIEVIATETRPRNQGHITAKELAEYGIPVTLIVDS--------AVRYFMKDVDK--- 191 (310)
T ss_pred EEEEeCCcHHHHHHHHHHHHCCCeEEEEEecCCchhhHHHHHHHHHHCCCCEEEEehh--------HHHHHHHhCCE---
Confidence 78888888777777776655445566776654321 1 223333448888888732 33333433221
Q ss_pred EEEEeeCCCccccccC---HHHHHHHHHHhCC
Q 011842 237 IINVNIGTTVKGAVDD---LDLVIQTLEESGF 265 (476)
Q Consensus 237 ~vv~t~gtt~tG~id~---l~~I~~ia~~~g~ 265 (476)
+++....-...|.+-. -..++-+|+.|++
T Consensus 192 VivGAd~v~~nG~v~nkiGT~~~A~~Ak~~~v 223 (310)
T PRK08535 192 VVVGADAITANGAVINKIGTSQIALAAHEARV 223 (310)
T ss_pred EEECccEEecCCCEEeHHhHHHHHHHHHHhCC
Confidence 3433333334454432 3577888999998
No 432
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=28.91 E-value=6.6e+02 Score=25.89 Aligned_cols=66 Identities=12% Similarity=0.094 Sum_probs=38.2
Q ss_pred EEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccCHHHHHHHHHcC
Q 011842 161 GYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCADFKAKLLQN 231 (476)
Q Consensus 161 g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~~~Le~~l~~~ 231 (476)
+++..+|..+.-.|-.++++ .+..|++-+-+-.+..++....+-++..+.+| -.|.++|.++|.+.
T Consensus 4 ilviGaG~Vg~~va~~la~~--~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD---~~d~~al~~li~~~ 69 (389)
T COG1748 4 ILVIGAGGVGSVVAHKLAQN--GDGEVTIADRSKEKCARIAELIGGKVEALQVD---AADVDALVALIKDF 69 (389)
T ss_pred EEEECCchhHHHHHHHHHhC--CCceEEEEeCCHHHHHHHHhhccccceeEEec---ccChHHHHHHHhcC
Confidence 56666777777777666665 32455554444444444444432234333333 23888999999876
No 433
>COG0367 AsnB Asparagine synthase (glutamine-hydrolyzing) [Amino acid transport and metabolism]
Probab=28.81 E-value=4.8e+02 Score=28.15 Aligned_cols=117 Identities=10% Similarity=-0.007 Sum_probs=67.9
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEE--EecCCCch------HHHHHHHHcCCeEEE
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGIL--YASRESHY------SVFKAARMYRMECVK 210 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~V--l~s~~~H~------S~~~~~~~~G~~v~~ 210 (476)
.+...+.+.+.+-+-.+. -.|++.+||-.+.++|..+.+.. +.... ++-...+. -....+..+|.+.+.
T Consensus 214 ~l~~~l~~sV~~r~~adv--pvg~~lSGGlDSS~Iaa~a~~~~-~~~~~~~fsvg~~~~~~~D~~~a~~~A~~lg~~h~~ 290 (542)
T COG0367 214 HLRSLLEDAVKRRLVADV--PVGVFLSGGLDSSLIAAIAAEEL-GKEGKTTFTVGFEDSDSPDAKYARAVAKFLGTPHHE 290 (542)
T ss_pred HHHHHHHHHHHHHhccCC--cEEEEeCCCccHHHHHHHHHHhc-cccceeeeEeecCCCCCchHHHHHHHHHHhCCCcEE
Confidence 344444555554442332 24999999999988887776652 22111 22222222 135677778886555
Q ss_pred EeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEe
Q 011842 211 VDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCD 275 (476)
Q Consensus 211 v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD 275 (476)
+.. ..+++.+++.+. +.........+...|+--+++.+++++. .++..
T Consensus 291 ~~~------~~~e~~~~~~~v------v~~~~~p~~~~~~~ply~~~~~a~~~g~-----kVvLS 338 (542)
T COG0367 291 IIL------TNEELLNALPEV------VKALDTPGGMAASIPLYLLSRKARAEGE-----KVVLS 338 (542)
T ss_pred Eee------cHHHHHHHHHHH------HhhcCCCCcccchhHHHHHHHhhhhcCc-----EEeec
Confidence 554 456666665432 1111122225677889999999999998 77763
No 434
>PRK10494 hypothetical protein; Provisional
Probab=28.66 E-value=2e+02 Score=27.78 Aligned_cols=70 Identities=10% Similarity=-0.018 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHcCCCCCcccEEEcCC--chhHHHHHHHHHHhhCCCcEEEecCCCchH-HHHHHHHcCCeEEEEeCC
Q 011842 141 EVGVLDWFARLWELENNEYWGYITNC--GTEGNLHGILVGREVFPDGILYASRESHYS-VFKAARMYRMECVKVDCL 214 (476)
Q Consensus 141 e~~~~~~la~l~g~~~~~~~g~~t~g--gt~An~~al~aa~~~~p~~~Vl~s~~~H~S-~~~~~~~~G~~v~~v~~~ 214 (476)
|.++.+.++.-+|++.+. +++-.- .|.-|.....-.. .....+++++..|-- -...++..|++++..|+|
T Consensus 138 EA~~~~~~l~~lGVp~~~--Ii~e~~s~nT~eNa~~~~~~~--~~~~iiLVTsa~Hm~RA~~~f~~~Gl~v~p~Ptd 210 (259)
T PRK10494 138 TAEVGARVAQSLGVPRED--IITLDLPKDTEEEAAAVKQAI--GDAPFLLVTSASHLPRAMIFFQQEGLNPLPAPAN 210 (259)
T ss_pred HHHHHHHHHHHcCCCHHH--eeeCCCCCCHHHHHHHHHHHh--CCCCEEEECCHHHHHHHHHHHHHcCCceeecCCc
Confidence 444555555668988542 554333 3444443322222 234578888888843 234556679999998876
No 435
>cd00758 MoCF_BD MoCF_BD: molybdenum cofactor (MoCF) binding domain (BD). This domain is found a variety of proteins involved in biosynthesis of molybdopterin cofactor, like MoaB, MogA, and MoeA. The domain is presumed to bind molybdopterin.
Probab=28.41 E-value=1.8e+02 Score=24.61 Aligned_cols=62 Identities=13% Similarity=0.148 Sum_probs=35.9
Q ss_pred CchHHHHHHHHcCCeEEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHH
Q 011842 193 SHYSVFKAARMYRMECVKVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQ 258 (476)
Q Consensus 193 ~H~S~~~~~~~~G~~v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ 258 (476)
+.+.+...++.+|.++....+-+| |.+.+++++.+.-...-+| ++.|.+..|..|-..+..+
T Consensus 20 n~~~l~~~l~~~G~~v~~~~~v~D---d~~~i~~~i~~~~~~~Dlv-ittGG~g~g~~D~t~~ai~ 81 (133)
T cd00758 20 NGPALEALLEDLGCEVIYAGVVPD---DADSIRAALIEASREADLV-LTTGGTGVGRRDVTPEALA 81 (133)
T ss_pred hHHHHHHHHHHCCCEEEEeeecCC---CHHHHHHHHHHHHhcCCEE-EECCCCCCCCCcchHHHHH
Confidence 344566667888988777654322 6666666665421111255 4456666677777655443
No 436
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=28.31 E-value=1.1e+02 Score=31.56 Aligned_cols=50 Identities=16% Similarity=0.215 Sum_probs=33.3
Q ss_pred cCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEe
Q 011842 219 IDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCD 275 (476)
Q Consensus 219 ~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD 275 (476)
.+.+.|-+.+...-...-+++. .....|...+++.+.++|++.|. .+.+|
T Consensus 128 ~~~~~ll~~~~~~l~~~~~vVL--SDY~KG~L~~~q~~I~~ar~~~~-----pVLvD 177 (467)
T COG2870 128 EDENKLLEKIKNALKSFDALVL--SDYAKGVLTNVQKMIDLAREAGI-----PVLVD 177 (467)
T ss_pred hhHHHHHHHHHHHhhcCCEEEE--eccccccchhHHHHHHHHHHcCC-----cEEEC
Confidence 3444444444432111114545 34567999999999999999999 99999
No 437
>TIGR00290 MJ0570_dom MJ0570-related uncharacterized domain. Proteins with this uncharacterized domain include two apparent ortholog families in the Archaea, one of which is universal among the first four completed archaeal genomes, and YLR143W, a much longer protein from Saccharomyces cerevisiae. The domain comprises the full length of the archaeal proteins and the first third of the yeast protein.
Probab=27.74 E-value=5.2e+02 Score=24.32 Aligned_cols=94 Identities=15% Similarity=0.069 Sum_probs=56.9
Q ss_pred EEEcCCchhHHHHHHHHHHhhCCCcEEE---ecCC-----Cc----hHHHHHHHHcCCeEEEEeCCCCCccCHHHHHHHH
Q 011842 161 GYITNCGTEGNLHGILVGREVFPDGILY---ASRE-----SH----YSVFKAARMYRMECVKVDCLISGEIDCADFKAKL 228 (476)
Q Consensus 161 g~~t~ggt~An~~al~aa~~~~p~~~Vl---~s~~-----~H----~S~~~~~~~~G~~v~~v~~~~~g~~D~~~Le~~l 228 (476)
.+..|||-.+++...++..+ +. .+.+ ++.. .| .-+...++.+|+.++.++......--.++|++++
T Consensus 4 ~~l~SGGKDS~~al~~a~~~-~~-v~~L~t~~~~~~~s~~~H~~~~~~~~~qA~algipl~~~~~~~~~e~~~e~l~~~l 81 (223)
T TIGR00290 4 AALISGGKDSCLALYHALKE-HE-VISLVNIMPENEESYMFHGVNAHLTDLQAESIGIPLIKLYTEGTEEDEVEELKGIL 81 (223)
T ss_pred EEEecCcHHHHHHHHHHHHh-Ce-eEEEEEEecCCCCcccccccCHHHHHHHHHHcCCCeEEeecCCCccHHHHHHHHHH
Confidence 45678999999887777655 22 1111 2221 12 2245677888998877776533333456777777
Q ss_pred HcCCCCcEEEEEeeCCCcccccc---CHHHHHHHHHHhCC
Q 011842 229 LQNKDKPAIINVNIGTTVKGAVD---DLDLVIQTLEESGF 265 (476)
Q Consensus 229 ~~~~~~p~~vv~t~gtt~tG~id---~l~~I~~ia~~~g~ 265 (476)
.+-+ ...|+. |+++ -...+-.+|++.|+
T Consensus 82 ~~~g--v~~vv~-------GdI~s~~qr~~~e~v~~~lgl 112 (223)
T TIGR00290 82 HTLD--VEAVVF-------GAIYSEYQKTRIERVCRELGL 112 (223)
T ss_pred HHcC--CCEEEE-------CCcccHHHHHHHHHHHHhcCC
Confidence 6542 113333 6664 35677888999998
No 438
>TIGR00289 conserved hypothetical protein TIGR00289. Homologous proteins related to MJ0570 of Methanococcus jannaschii include both the apparent orthologs found by this model above the trusted cutoff, the much longer protein YLR143W from Saccharomyces cerevisiae, and second homologous proteins from Archaeoglobus fulgidus and Pyrococcus horikoshii that appear to represent a second orthologous group.
Probab=27.72 E-value=5.2e+02 Score=24.30 Aligned_cols=95 Identities=15% Similarity=0.055 Sum_probs=55.8
Q ss_pred EEEcCCchhHHHHHHHHHHhhCCCcEEE--ec---------CCCchHHHHHHHHcCCeEEEEeCCCCCccCHHHHHHHHH
Q 011842 161 GYITNCGTEGNLHGILVGREVFPDGILY--AS---------RESHYSVFKAARMYRMECVKVDCLISGEIDCADFKAKLL 229 (476)
Q Consensus 161 g~~t~ggt~An~~al~aa~~~~p~~~Vl--~s---------~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~~~Le~~l~ 229 (476)
.+..|||-.+.+.+.++... +.-..++ .+ ...+.-....++.+|+.++.+.......--+++|.+.+.
T Consensus 4 ~vl~SGGKDS~lAl~~~~~~-~~V~~L~~~~~~~~~s~~~h~~~~~~~~~qA~algiPl~~~~~~~~~e~~~~~l~~~l~ 82 (222)
T TIGR00289 4 AVLYSGGKDSILALYKALEE-HEVISLVGVFSENEESYMFHSPNLHLTDLVAEAVGIPLIKLYTSGEEEKEVEDLAGQLG 82 (222)
T ss_pred EEEecCcHHHHHHHHHHHHc-CeeEEEEEEcCCCCCccccccCCHHHHHHHHHHcCCCeEEEEcCCchhHHHHHHHHHHH
Confidence 45779999999888777654 2111111 11 112234567788889988777764322223456666664
Q ss_pred cCCCCcEEEEEeeCCCcccccc---CHHHHHHHHHHhCC
Q 011842 230 QNKDKPAIINVNIGTTVKGAVD---DLDLVIQTLEESGF 265 (476)
Q Consensus 230 ~~~~~p~~vv~t~gtt~tG~id---~l~~I~~ia~~~g~ 265 (476)
+.+ .-.|+. |+++ --..+-.+|++.|+
T Consensus 83 ~~g--v~~vv~-------GdI~s~~qr~~~e~vc~~~gl 112 (222)
T TIGR00289 83 ELD--VEALCI-------GAIESNYQKSRIDKVCRELGL 112 (222)
T ss_pred HcC--CCEEEE-------CccccHHHHHHHHHHHHHcCC
Confidence 432 113332 6664 35677889999998
No 439
>smart00852 MoCF_biosynth Probable molybdopterin binding domain. This domain is found a variety of proteins involved in biosynthesis of molybdopterin cofactor. The domain is presumed to bind molybdopterin. The structure of this domain is known, and it forms an alpha/beta structure. In the known structure of Gephyrin this domain mediates trimerisation.
Probab=27.21 E-value=2e+02 Score=24.25 Aligned_cols=61 Identities=13% Similarity=0.104 Sum_probs=35.0
Q ss_pred CchHHHHHHHHcCCeEEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHH
Q 011842 193 SHYSVFKAARMYRMECVKVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVI 257 (476)
Q Consensus 193 ~H~S~~~~~~~~G~~v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~ 257 (476)
+-+.+...++.+|++++...+-.+ |.+.+++.|.+.....-+|+. .|.+..|..|-..+..
T Consensus 19 ~~~~l~~~l~~~G~~~~~~~~v~D---d~~~I~~~l~~~~~~~dliit-tGG~g~g~~D~t~~~l 79 (135)
T smart00852 19 NGPALAELLTELGIEVTRYVIVPD---DKEAIKEALREALERADLVIT-TGGTGPGPDDVTPEAV 79 (135)
T ss_pred cHHHHHHHHHHCCCeEEEEEEeCC---CHHHHHHHHHHHHhCCCEEEE-cCCCCCCCCcCcHHHH
Confidence 344567778888987665543221 667777776542211225544 4555567777665544
No 440
>cd01019 ZnuA Zinc binding protein ZnuA. These proteins have been shown to function as initial receptors in the ABC uptake of Zn2+. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a single helix and bind their specific ligands in the cleft between these domains. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=27.06 E-value=3.8e+02 Score=26.08 Aligned_cols=71 Identities=8% Similarity=-0.063 Sum_probs=42.6
Q ss_pred CcEEEecCCCchHHHHHHHHcCCeEEEEe-CCCCCccCHHHHHHHHHcC--CCCcEEEEEeeCCCccccccCHHHHHHHH
Q 011842 184 DGILYASRESHYSVFKAARMYRMECVKVD-CLISGEIDCADFKAKLLQN--KDKPAIINVNIGTTVKGAVDDLDLVIQTL 260 (476)
Q Consensus 184 ~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~-~~~~g~~D~~~Le~~l~~~--~~~p~~vv~t~gtt~tG~id~l~~I~~ia 260 (476)
+..+++ .|.++...++.+|++++.+- ...+....+.+|.+.+..- .+.+ +|+.. +.. +=+.+..|+
T Consensus 179 ~~~~v~---~H~af~Yl~~~~gl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~-~If~e-~~~------~~~~~~~ia 247 (286)
T cd01019 179 TKPFFV---FHDAYGYFEKRYGLTQAGVFTIDPEIDPGAKRLAKIRKEIKEKGAT-CVFAE-PQF------HPKIAETLA 247 (286)
T ss_pred CCeEEE---ecccHHHHHHHcCCceeeeecCCCCCCCCHHHHHHHHHHHHHcCCc-EEEec-CCC------ChHHHHHHH
Confidence 334555 67788889999999866543 3345667777777766532 2222 33332 321 125666777
Q ss_pred HHhCC
Q 011842 261 EESGF 265 (476)
Q Consensus 261 ~~~g~ 265 (476)
++.|+
T Consensus 248 ~~~g~ 252 (286)
T cd01019 248 EGTGA 252 (286)
T ss_pred HhcCc
Confidence 88887
No 441
>PF02110 HK: Hydroxyethylthiazole kinase family; InterPro: IPR000417 Thiamine pyrophosphate (TPP), a required cofactor for many enzymes in the cell, is synthesised de novo in Salmonella typhimurium []. Five kinase activities have been implicated in TPP synthesis, which involves joining a 4-methyl-5-(beta-hydroxyethyl)thiazole (THZ) moiety and a 4-amino-5- hydroxymethyl-2-methylpyrimidine (HMP) moiety [, ]. THZ kinase (2.7.1.50 from EC) activity is involved in the salvage synthesis of TH-P from the thiazole: 2-methyl-4-amino-5-hydroxymethylpyrimidine diphosphate + 4-4-methyl-5-(2-phosphonooxyethyl)-thiazole = pyrophosphate + thiamin monophosphate Hydroxyethylthiazole kinase expression is regulated at the mRNA level by intracellular thiamin pyrophosphate [].; GO: 0004417 hydroxyethylthiazole kinase activity, 0009228 thiamine biosynthetic process; PDB: 1EKK_A 1ESQ_C 1C3Q_B 1ESJ_A 1EKQ_B 3HPD_A 3DZV_A 3NL5_A 3NL2_A 3NM1_A ....
Probab=26.86 E-value=2.7e+02 Score=26.65 Aligned_cols=65 Identities=15% Similarity=0.156 Sum_probs=42.7
Q ss_pred HHHHHHHcCCeEEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEec
Q 011842 197 VFKAARMYRMECVKVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDG 276 (476)
Q Consensus 197 ~~~~~~~~G~~v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~ 276 (476)
..++.-.+|+.+.--. .++++++..... . .+++|.||-..-.++-+....+.++++|. +++.|=
T Consensus 23 ~AN~~LA~GasPiMa~-------~~~E~~e~~~~a-~---al~iNiGTl~~~~~~~m~~A~~~A~~~~~-----PvVLDP 86 (246)
T PF02110_consen 23 VANALLAIGASPIMAE-------APEEVEEFASIA-D---ALVINIGTLTDERIEAMKKAAKAANELGI-----PVVLDP 86 (246)
T ss_dssp HHHHHHHCTSEEEE---------STTTHHHHHHCT-S---EEEEESTTSSHHHHHHHHHHHHHHHHTT-------EEEE-
T ss_pred HHHHHHHcCCCccccC-------CHHHHHHHHHHc-C---EEEEECCCCCHhHHHHHHHHHHHHHHcCC-----CEEEeC
Confidence 3445555688766543 345666665433 3 68899887666667778888999999999 999996
Q ss_pred C
Q 011842 277 A 277 (476)
Q Consensus 277 a 277 (476)
+
T Consensus 87 V 87 (246)
T PF02110_consen 87 V 87 (246)
T ss_dssp T
T ss_pred c
Confidence 6
No 442
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=26.85 E-value=4.3e+02 Score=23.05 Aligned_cols=42 Identities=24% Similarity=0.287 Sum_probs=29.6
Q ss_pred cCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCC
Q 011842 219 IDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGF 265 (476)
Q Consensus 219 ~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~ 265 (476)
.|++.+.+++.... .|+.+.+.+.. ..+..+.+.+.|+++|+
T Consensus 49 ~d~~~~~~al~~~d----~vi~~~~~~~~-~~~~~~~~~~a~~~~~~ 90 (183)
T PF13460_consen 49 FDPDSVKAALKGAD----AVIHAAGPPPK-DVDAAKNIIEAAKKAGV 90 (183)
T ss_dssp TCHHHHHHHHTTSS----EEEECCHSTTT-HHHHHHHHHHHHHHTTS
T ss_pred hhhhhhhhhhhhcc----hhhhhhhhhcc-ccccccccccccccccc
Confidence 38899999997543 45554554333 36668889999999987
No 443
>PF01136 Peptidase_U32: Peptidase family U32 This is family U32 in the peptidase classification. ; InterPro: IPR001539 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. The peptidases families associated with clan U- have an unknown catalytic mechanism as the protein fold of the active site domain and the active site residues have not been reported. This is a group of peptidases belonging to MEROPS peptidase family U32 (clan U-). The type example is collagenase (gene prtC) from Porphyromonas gingivalis (Bacteroides gingivalis) [], which is an enzyme that degrades type I collagen and that seems to require a metal cofactor. The product of PrtC is evolutionary related to a number of uncharacterised proteins with a well conserved region containing two cysteines.; GO: 0008233 peptidase activity, 0006508 proteolysis
Probab=26.71 E-value=5e+02 Score=24.09 Aligned_cols=77 Identities=17% Similarity=0.160 Sum_probs=46.7
Q ss_pred HHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHH---cCCeEEEEeCCCCCcc
Q 011842 143 GVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARM---YRMECVKVDCLISGEI 219 (476)
Q Consensus 143 ~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~---~G~~v~~v~~~~~g~~ 219 (476)
++.+++.++.....+ ++++ ++...+..+++..|+..|+++..........++. .|+..+.++. ++
T Consensus 3 ~~~~~l~~l~~~g~d---gi~v-----~~~g~~~~~k~~~~~~~i~~~~~~nv~N~~s~~~~~~~G~~~i~ls~----EL 70 (233)
T PF01136_consen 3 ELEKYLDKLKELGVD---GILV-----SNPGLLELLKELGPDLKIIADYSLNVFNSESARFLKELGASRITLSP----EL 70 (233)
T ss_pred HHHHHHHHHHhCCCC---EEEE-----cCHHHHHHHHHhCCCCcEEEecCccCCCHHHHHHHHHcCCCEEEECc----cC
Confidence 344455555555433 5544 3555667777777888888877665433333333 3777766664 35
Q ss_pred CHHHHHHHHHcC
Q 011842 220 DCADFKAKLLQN 231 (476)
Q Consensus 220 D~~~Le~~l~~~ 231 (476)
+.++|++..+..
T Consensus 71 ~~~ei~~i~~~~ 82 (233)
T PF01136_consen 71 SLEEIKEIAENS 82 (233)
T ss_pred CHHHHHHHHHhC
Confidence 788888876654
No 444
>TIGR01275 ACC_deam_rel pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family. This model represents a family of pyridoxal phosphate-dependent enzymes closely related to (and often designated as putative examples of) 1-aminocyclopropane-1-carboxylate deaminase. It appears that members of this family include both D-cysteine desulfhydrase (EC 4.4.1.15) and 1-aminocyclopropane-1-carboxylate deaminase (EC 3.5.99.7).
Probab=26.56 E-value=2.9e+02 Score=27.12 Aligned_cols=53 Identities=11% Similarity=0.051 Sum_probs=32.5
Q ss_pred EEEcCCchhHHHHH-HHHHHh-hCCCcEEEecCCCc-hHHHHHHHHcCCeEEEEeC
Q 011842 161 GYITNCGTEGNLHG-ILVGRE-VFPDGILYASRESH-YSVFKAARMYRMECVKVDC 213 (476)
Q Consensus 161 g~~t~ggt~An~~a-l~aa~~-~~p~~~Vl~s~~~H-~S~~~~~~~~G~~v~~v~~ 213 (476)
.+++.|+|.+|... +.++.. ..-...|+++.... .......+.+|++++.++.
T Consensus 58 ~vv~~g~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~~~~~~~~~~Ga~v~~v~~ 113 (311)
T TIGR01275 58 TVITVGAIQSNHARATALAAKKLGLDAVLVLREKEELNGNLLLDKLMGAETRVYSA 113 (311)
T ss_pred EEEEcCCchhHHHHHHHHHHHHhCCceEEEecCCccCCCCHHHHHHcCCEEEEECc
Confidence 68888888888743 332222 22345677776432 2234456889999988874
No 445
>TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit. ATP citrate lyases appear to form an outgroup.
Probab=26.28 E-value=1.4e+02 Score=29.29 Aligned_cols=66 Identities=20% Similarity=0.127 Sum_probs=40.8
Q ss_pred cCCCchHHHHHHHH--cCCeEEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCC
Q 011842 190 SRESHYSVFKAARM--YRMECVKVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGF 265 (476)
Q Consensus 190 s~~~H~S~~~~~~~--~G~~v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~ 265 (476)
.-+.|.|+.....- -.+-++.+|.. .-++.+++..+... +.+|+++.|.... +-++|.++|+++|+
T Consensus 48 G~~~y~sv~dlp~~~~~Dlavi~vpa~----~v~~~l~e~~~~Gv--k~avIis~Gf~e~----~~~~l~~~a~~~gi 115 (286)
T TIGR01019 48 GLPVFDSVKEAVEETGANASVIFVPAP----FAADAIFEAIDAGI--ELIVCITEGIPVH----DMLKVKRYMEESGT 115 (286)
T ss_pred CeeccCCHHHHhhccCCCEEEEecCHH----HHHHHHHHHHHCCC--CEEEEECCCCCHH----HHHHHHHHHHHcCC
Confidence 33456677766553 23334445432 24566676665443 3688888875433 34799999999999
No 446
>PRK08329 threonine synthase; Validated
Probab=25.90 E-value=5.9e+02 Score=25.56 Aligned_cols=52 Identities=12% Similarity=-0.053 Sum_probs=35.7
Q ss_pred EEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeC
Q 011842 161 GYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDC 213 (476)
Q Consensus 161 g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~ 213 (476)
++..++|..+.-+|..+++. .-+..|++++..-..-....+.+|++++.++-
T Consensus 107 vv~aSsGN~g~alA~~aa~~-G~~~~v~vp~~~~~~k~~~~~~~GA~v~~v~~ 158 (347)
T PRK08329 107 VVIDSSGNAALSLALYSLSE-GIKVHVFVSYNASKEKISLLSRLGAELHFVEG 158 (347)
T ss_pred EEEECCCcHHHHHHHHHHHc-CCcEEEEECCCChHHHHHHHHHcCCEEEEECC
Confidence 55566777777666666543 23457778776555566777889999998874
No 447
>PRK05678 succinyl-CoA synthetase subunit alpha; Validated
Probab=25.86 E-value=1.5e+02 Score=29.28 Aligned_cols=65 Identities=15% Similarity=0.039 Sum_probs=39.9
Q ss_pred CCCchHHHHHHHH--cCCeEEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCC
Q 011842 191 RESHYSVFKAARM--YRMECVKVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGF 265 (476)
Q Consensus 191 ~~~H~S~~~~~~~--~G~~v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~ 265 (476)
-+.|.|+.....- -.+-++.+|.. .-++.|++..+... ..+|+++.|.. ..+-++|.++++++|+
T Consensus 51 ~~~y~sv~dlp~~~~~DlAvi~vp~~----~v~~~l~e~~~~gv--k~avI~s~Gf~----~~~~~~l~~~a~~~gi 117 (291)
T PRK05678 51 LPVFNTVAEAVEATGANASVIYVPPP----FAADAILEAIDAGI--DLIVCITEGIP----VLDMLEVKAYLERKKT 117 (291)
T ss_pred eeccCCHHHHhhccCCCEEEEEcCHH----HHHHHHHHHHHCCC--CEEEEECCCCC----HHHHHHHHHHHHHcCC
Confidence 3356666666553 23344455532 34566777666443 35788888753 2223489999999999
No 448
>PRK09355 hydroxyethylthiazole kinase; Validated
Probab=25.86 E-value=2.8e+02 Score=26.70 Aligned_cols=63 Identities=11% Similarity=0.041 Sum_probs=38.6
Q ss_pred HHHHHcCCeEEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecC
Q 011842 199 KAARMYRMECVKVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGA 277 (476)
Q Consensus 199 ~~~~~~G~~v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a 277 (476)
.+.-..|+.+.... +++.+++.+.... .++++.|+-....++-+..+.+.+++++. ++++|..
T Consensus 30 n~~la~g~sp~m~~-------~~~e~~~~~~~~~----alvi~~G~l~~~~~~~i~~~~~~a~~~~~-----pvVlDpv 92 (263)
T PRK09355 30 NGLLALGASPAMAH-------APEEAEEMAKIAG----ALVINIGTLTEERIEAMLAAGKIANEAGK-----PVVLDPV 92 (263)
T ss_pred HHHHHhCCCcccCC-------CHHHHHHHHHhcC----ceEEeCCCCCHHHHHHHHHHHHHHHhcCC-----CEEECCc
Confidence 34444577654322 6677887775443 46666665433333445556666888898 8999976
No 449
>cd03325 D-galactonate_dehydratase D-galactonate dehydratase catalyses the dehydration of galactonate to 2-keto-3-deoxygalactnate (KDGal), as part of the D-galactonate nonphosphorolytic catabolic Entner-Doudoroff pathway. D-galactonate dehydratase belongs to the enolase superfamily of enzymes, characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion.
Probab=25.71 E-value=6.5e+02 Score=25.26 Aligned_cols=90 Identities=17% Similarity=0.125 Sum_probs=48.9
Q ss_pred HHHHHHHHhhC-CCcEEEecCCCchHHHHHHHHc------CCeEEEEeCCCC--------------------CccCHHHH
Q 011842 172 LHGILVGREVF-PDGILYASRESHYSVFKAARMY------RMECVKVDCLIS--------------------GEIDCADF 224 (476)
Q Consensus 172 ~~al~aa~~~~-p~~~Vl~s~~~H~S~~~~~~~~------G~~v~~v~~~~~--------------------g~~D~~~L 224 (476)
..-+.+.|+.. |+..+.++...-++...+.+++ ++..+.=|+..+ ...++.++
T Consensus 163 ~~~i~avr~~~g~~~~l~vDaN~~~~~~~A~~~~~~l~~~~i~~iEeP~~~~d~~~~~~L~~~~~~pia~dEs~~~~~~~ 242 (352)
T cd03325 163 VERVAALREAVGPDIDIGVDFHGRVSKPMAKDLAKELEPYRLLFIEEPVLPENVEALAEIAARTTIPIATGERLFSRWDF 242 (352)
T ss_pred HHHHHHHHHhhCCCCEEEEECCCCCCHHHHHHHHHhccccCCcEEECCCCccCHHHHHHHHHhCCCCEEecccccCHHHH
Confidence 34445555544 4556777776666665544432 332222223211 11345555
Q ss_pred HHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCC
Q 011842 225 KAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGF 265 (476)
Q Consensus 225 e~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~ 265 (476)
.+.+.... +=+++.-.+..|.+.+..+++++|+++|+
T Consensus 243 ~~~~~~~~----~d~v~~d~~~~GGit~~~~~~~lA~~~gi 279 (352)
T cd03325 243 KELLEDGA----VDIIQPDISHAGGITELKKIAAMAEAYDV 279 (352)
T ss_pred HHHHHhCC----CCEEecCccccCCHHHHHHHHHHHHHcCC
Confidence 55554321 22233345667888888899999999998
No 450
>COG2185 Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism]
Probab=25.54 E-value=3.4e+02 Score=23.71 Aligned_cols=60 Identities=17% Similarity=0.258 Sum_probs=39.7
Q ss_pred HHHHHHHcCCeEEEEeCCCCCccCH-HHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCC
Q 011842 197 VFKAARMYRMECVKVDCLISGEIDC-ADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGF 265 (476)
Q Consensus 197 ~~~~~~~~G~~v~~v~~~~~g~~D~-~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~ 265 (476)
+..+.+-.|++++..+... .+ |.+.++++++.. +|.++ +..-+..+.++++.+.++++|.
T Consensus 32 ia~~l~d~GfeVi~~g~~~----tp~e~v~aA~~~dv~---vIgvS--sl~g~h~~l~~~lve~lre~G~ 92 (143)
T COG2185 32 IARALADAGFEVINLGLFQ----TPEEAVRAAVEEDVD---VIGVS--SLDGGHLTLVPGLVEALREAGV 92 (143)
T ss_pred HHHHHHhCCceEEecCCcC----CHHHHHHHHHhcCCC---EEEEE--eccchHHHHHHHHHHHHHHhCC
Confidence 3455666699998877643 33 455666677654 44442 2233556788999999999997
No 451
>PF04748 Polysacc_deac_2: Divergent polysaccharide deacetylase; InterPro: IPR006837 This is a family of uncharacterised proteins that includes YibQ.; PDB: 2QV5_A 2NLY_A.
Probab=25.36 E-value=2.3e+02 Score=26.47 Aligned_cols=54 Identities=19% Similarity=0.418 Sum_probs=34.6
Q ss_pred ccCHHHHHHHHHcC-CCCcEEEEEe--eCCCccccccCHHHHHHHHHHhCCCCCceEEEEecC
Q 011842 218 EIDCADFKAKLLQN-KDKPAIINVN--IGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGA 277 (476)
Q Consensus 218 ~~D~~~Le~~l~~~-~~~p~~vv~t--~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a 277 (476)
.++.+++++.+... ...|-++-+| .|+-.|.....++.+.+.++++|+ +.+|--
T Consensus 70 ~~~~~~i~~~l~~al~~vp~a~GvnNhmGS~~T~~~~~m~~vl~~l~~~gl------~FvDS~ 126 (213)
T PF04748_consen 70 GMSEEEIRKRLEAALARVPGAVGVNNHMGSRFTSDREAMRWVLEVLKERGL------FFVDSR 126 (213)
T ss_dssp TS-HHHHHHHHHHHHCCSTT-SEEEEEE-CCHHC-HHHHHHHHHHHHHTT-------EEEE-S
T ss_pred CCCHHHHHHHHHHHHHHCCCcEEEecCCCccccCCHHHHHHHHHHHHHcCC------EEEeCC
Confidence 47888888888754 3345455554 456667777789999999999996 566643
No 452
>PRK15452 putative protease; Provisional
Probab=25.29 E-value=8.1e+02 Score=25.71 Aligned_cols=133 Identities=14% Similarity=0.083 Sum_probs=68.0
Q ss_pred HHHHHHHhcccc-cccCCCCcC------CcchHHHHHHHHHhhCCCCCCcccCccchhhHHHHHHHHHHHHHHcCCCCCc
Q 011842 86 ARYRKTLMERTK-HHLGYPYNL------DFDYGALAQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELENNE 158 (476)
Q Consensus 86 ~~~~~~~~~~~~-~~~g~p~~~------~~~~~~l~~~l~~~~n~~g~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~ 158 (476)
+.++..+..+.. .|+|.+.+. .|....+.+.+.......-..+...+.-.+..+ ...+.+++.++..+..+
T Consensus 14 e~l~aAi~~GADaVY~G~~~~~~R~~~~~f~~edl~eav~~ah~~g~kvyvt~n~i~~e~e-l~~~~~~l~~l~~~gvD- 91 (443)
T PRK15452 14 KNMRYAFAYGADAVYAGQPRYSLRVRNNEFNHENLALGINEAHALGKKFYVVVNIAPHNAK-LKTFIRDLEPVIAMKPD- 91 (443)
T ss_pred HHHHHHHHCCCCEEEECCCccchhhhccCCCHHHHHHHHHHHHHcCCEEEEEecCcCCHHH-HHHHHHHHHHHHhCCCC-
Confidence 344445544432 377766543 222344555555433222222222221112222 23455566666655543
Q ss_pred ccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHH---HHcCCeEEEEeCCCCCccCHHHHHHHHHcC
Q 011842 159 YWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAA---RMYRMECVKVDCLISGEIDCADFKAKLLQN 231 (476)
Q Consensus 159 ~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~---~~~G~~v~~v~~~~~g~~D~~~Le~~l~~~ 231 (476)
+++... +-.+..+++..|+..|..|.........++ .-+|+.-+.++. +++++++++..+..
T Consensus 92 --gvIV~d-----~G~l~~~ke~~p~l~ih~stqlni~N~~a~~f~~~lG~~rvvLSr----ELsl~EI~~i~~~~ 156 (443)
T PRK15452 92 --ALIMSD-----PGLIMMVREHFPEMPIHLSVQANAVNWATVKFWQQMGLTRVILSR----ELSLEEIEEIRQQC 156 (443)
T ss_pred --EEEEcC-----HHHHHHHHHhCCCCeEEEEecccCCCHHHHHHHHHCCCcEEEECC----cCCHHHHHHHHhhC
Confidence 665533 333455566568888888776654333333 334776666654 57889998876543
No 453
>PRK13802 bifunctional indole-3-glycerol phosphate synthase/tryptophan synthase subunit beta; Provisional
Probab=25.13 E-value=1e+03 Score=26.72 Aligned_cols=72 Identities=13% Similarity=0.057 Sum_probs=43.4
Q ss_pred hHHHHHHHHHH-HHHHcCCCCCcccEEE-cCCchhHHHHHHHHHHhhCCCcEEEecCCCc---hHHHHHHHHcCCeEEEE
Q 011842 137 SRQFEVGVLDW-FARLWELENNEYWGYI-TNCGTEGNLHGILVGREVFPDGILYASRESH---YSVFKAARMYRMECVKV 211 (476)
Q Consensus 137 ~~~le~~~~~~-la~l~g~~~~~~~g~~-t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H---~S~~~~~~~~G~~v~~v 211 (476)
+..++-.+... .++..|... +++ |++|..+.-+|+.+++.- =...|++++... ..-...++.+|++++.+
T Consensus 361 S~KdR~Al~~i~~A~~~G~~~----~IvetssGNhG~AlA~aaA~~G-l~c~Ivmp~~~~~~~~~nv~~mr~lGAeVi~v 435 (695)
T PRK13802 361 AHKINNALGQALLVKRMGKTR----VIAETGAGQHGVATATVCAMLG-LKCRIYMGQIDARRQALNVARMRMLGAEVVEV 435 (695)
T ss_pred CcHHHHHHHHHHHHHHcCCCC----EEEEECcHHHHHHHHHHHHHcC-CCEEEEEeCCcccccHHHHHHHHHcCCEEEEE
Confidence 34555544432 233445532 444 577788888887776542 345677776431 22345788999999988
Q ss_pred eC
Q 011842 212 DC 213 (476)
Q Consensus 212 ~~ 213 (476)
+.
T Consensus 436 ~~ 437 (695)
T PRK13802 436 TL 437 (695)
T ss_pred CC
Confidence 74
No 454
>PRK11633 cell division protein DedD; Provisional
Probab=24.82 E-value=3.2e+02 Score=25.82 Aligned_cols=54 Identities=24% Similarity=0.274 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHhcCCeEeecCCeeEEEEecCCcHHHhhceeecccCCEEEEEEcCCCCHHHHHHHHHHHHHH
Q 011842 374 LRNAHYLKDRLLDAGISAMLNELSSTVVFERPQDEEFVRRWQLACQGNIAHVVVMPNVTIDKLDDFLNELIEN 446 (476)
Q Consensus 374 ~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~~~~~~~~~~l~~~~~~lRv~~~~~~T~edid~~~~~l~~~ 446 (476)
.++++.|+++|+..|+.....+ .. ...+.+.|+.+.|+.++++.++.+..|+++
T Consensus 160 ~~~A~~l~~kL~~~G~~Ay~~~------~~-------------~~~G~~tRV~VGP~~sk~~ae~~~~~Lk~~ 213 (226)
T PRK11633 160 ADKVNEIVAKLRLSGYRVYTVP------ST-------------PVQGKITRIYVGPDASKDKLKGSLGELKQL 213 (226)
T ss_pred HHHHHHHHHHHHHCCCeeEEEe------ee-------------cCCCcEEEEEeCCCCCHHHHHHHHHHHHHh
Confidence 3567778889998887533211 00 112346799999999999999999998765
No 455
>cd04736 MDH_FMN Mandelate dehydrogenase (MDH)-like FMN-binding domain. MDH is part of a widespread family of homologous FMN-dependent a-hydroxy acid oxidizing enzymes that oxidizes (S)-mandelate to phenylglyoxalate. MDH is an enzyme in the mandelate pathway that occurs in several strains of Pseudomonas which converts (R)-mandelate to benzoate. This family occurs in both prokaryotes and eukaryotes. Members of this family include flavocytochrome b2 (FCB2), glycolate oxidase (GOX), lactate monooxygenase (LMO), mandelate dehydrogenase (MDH), and long chain hydroxyacid oxidase (LCHAO).
Probab=24.69 E-value=1.8e+02 Score=29.64 Aligned_cols=54 Identities=17% Similarity=0.226 Sum_probs=39.1
Q ss_pred CccCHHHHHHHHHcCCCCcEEEEEeeC-CCccccccCHHHHHHHHHHhCCCCCceEEEEecC
Q 011842 217 GEIDCADFKAKLLQNKDKPAIINVNIG-TTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGA 277 (476)
Q Consensus 217 g~~D~~~Le~~l~~~~~~p~~vv~t~g-tt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a 277 (476)
|-++.++.+++++.--+ .+++.++| +...+...+++.+.++++..++ .+++||-
T Consensus 243 gV~~~eda~~a~~~G~d--~I~VSnhGGrqld~~~~~~~~L~ei~~~~~~-----~vi~dGG 297 (361)
T cd04736 243 GIVTAEDAKRCIELGAD--GVILSNHGGRQLDDAIAPIEALAEIVAATYK-----PVLIDSG 297 (361)
T ss_pred cCCCHHHHHHHHHCCcC--EEEECCCCcCCCcCCccHHHHHHHHHHHhCC-----eEEEeCC
Confidence 34688888887765433 35556666 5566667789999999888888 8999964
No 456
>cd01991 Asn_Synthase_B_C The C-terminal domain of Asparagine Synthase B. This domain is always found associated n-terminal amidotransferase domain. Family members that contain this domain catalyse the conversion of aspartate to asparagine. Asparagine synthetase B catalyzes the assembly of asparagine from aspartate, Mg(2+)ATP, and glutamine. The three-dimensional architecture of the N-terminal domain of asparagine synthetase B is similar to that observed for glutamine phosphoribosylpyrophosphate amidotransferase while the molecular motif of the C-domain is reminiscent to that observed for GMP synthetase .
Probab=24.68 E-value=5.3e+02 Score=24.33 Aligned_cols=100 Identities=19% Similarity=0.147 Sum_probs=56.5
Q ss_pred cEEEcCCchhHHHHHHHHHHhhCCC--cE-EEecCCC---chHHHHHHHHcCCeEEEEeCCCCCccCHHHHHHHHHc---
Q 011842 160 WGYITNCGTEGNLHGILVGREVFPD--GI-LYASRES---HYSVFKAARMYRMECVKVDCLISGEIDCADFKAKLLQ--- 230 (476)
Q Consensus 160 ~g~~t~ggt~An~~al~aa~~~~p~--~~-Vl~s~~~---H~S~~~~~~~~G~~v~~v~~~~~g~~D~~~Le~~l~~--- 230 (476)
.++..|||-.+...+..+.+...+. .. +...... ..-..+.++.+|++...+..+ .+.+.+.+..
T Consensus 18 v~~~LSGGlDSs~va~~~~~~~~~~~~~~~~~~~~~~~~e~~~a~~~a~~l~~~~~~~~~~------~~~~~~~~~~~~~ 91 (269)
T cd01991 18 VGVLLSGGLDSSLVAALAARLLPEPVKTFSIGFGFEGSDEREYARRVAEHLGTEHHEVEFT------PADLLAALPDVIW 91 (269)
T ss_pred eEEeecccHHHHHHHHHHHHhhCCCCceEEEeeCCCCCChHHHHHHHHHHhCCcceEEEcC------HHHHHHHHHHHHH
Confidence 4899999999988776665542221 11 2222211 122456778889887777653 3333333321
Q ss_pred CCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcc
Q 011842 231 NKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALF 279 (476)
Q Consensus 231 ~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~ 279 (476)
....|. ......++..+++.++++++ -++.+|..+
T Consensus 92 ~~~~p~---------~~~~~~~~~~l~~~a~~~~~-----~v~l~G~g~ 126 (269)
T cd01991 92 ELDEPF---------ADSSAIPLYLLSRLARKHGI-----KVVLSGEGA 126 (269)
T ss_pred HhCCCC---------CCcHHHHHHHHHHHHHHhCC-----EEEEecCCc
Confidence 011111 11122466788999999997 778777644
No 457
>TIGR01138 cysM cysteine synthase B. Alternate name: O-acetylserine (thiol)-lyase
Probab=24.48 E-value=3.6e+02 Score=26.28 Aligned_cols=53 Identities=15% Similarity=0.006 Sum_probs=38.0
Q ss_pred EEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCC
Q 011842 161 GYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCL 214 (476)
Q Consensus 161 g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~ 214 (476)
.+-.++|..+.-+|..+.+. .-+..|++++..-..-...++.+|++++.++.+
T Consensus 62 vv~aSsGN~g~alA~~a~~~-G~~~~i~~p~~~~~~k~~~~~~~GA~v~~v~~~ 114 (290)
T TIGR01138 62 LIEATSGNTGIALAMIAALK-GYRMKLLMPDNMSQERKAAMRAYGAELILVTKE 114 (290)
T ss_pred EEEECCChHHHHHHHHHHHc-CCeEEEEECCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 55556777777666655443 234678888877777778899999999998753
No 458
>PF07476 MAAL_C: Methylaspartate ammonia-lyase C-terminus; InterPro: IPR022662 Methylaspartate ammonia-lyase 4.3.1.2 from EC catalyses the second step of fermentation of glutamate. It is a homodimer. This domain represents the C-terminal region of methylaspartate ammonia-lyase and contains a TIM barrel fold similar to the PF01188 from PFAM. This domain represents the catalytic domain and contains a metal binding site []. ; PDB: 1KKO_B 1KKR_A 3ZVI_A 1KD0_B 1KCZ_B 3ZVH_A.
Probab=24.43 E-value=4.7e+02 Score=24.77 Aligned_cols=146 Identities=12% Similarity=0.052 Sum_probs=78.3
Q ss_pred ccCCCCCcHHHHHHHHHHHHhcccccccCCCCcCCcchHHHHHHHHHhhCCCCCCcccCccchhhHHHHHHHHHHHHHHc
Q 011842 73 FTGDKEAYMAGVLARYRKTLMERTKHHLGYPYNLDFDYGALAQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLW 152 (476)
Q Consensus 73 ~~~~~~~~~~~il~~~~~~~~~~~~~~~g~p~~~~~~~~~l~~~l~~~~n~~g~~~~~~~~~~~~~~le~~~~~~la~l~ 152 (476)
.++.+|+...+.++++++.+..-.... -+|.+.--.|+.++.+.. + =..++.++++++-
T Consensus 41 klG~~Ge~L~eYv~Wl~~Ri~~lg~~~-Y~P~lHiDVYGtiG~~f~----~----------------d~~~~adYl~~l~ 99 (248)
T PF07476_consen 41 KLGPDGEKLLEYVKWLKDRIRELGDED-YRPVLHIDVYGTIGLAFD----N----------------DPDRMADYLAELE 99 (248)
T ss_dssp CC-TTSHHHHHHHHHHHHHHHHHSSTT----EEEEE-TTHHHHHTT----T-----------------HHHHHHHHHHHH
T ss_pred HhCcchHHHHHHHHHHHHHHHHhcCCC-CCccEEEEccchHHHHhC----C----------------CHHHHHHHHHHHH
Confidence 678889888888888888765532110 123333223566655432 1 1123445555543
Q ss_pred CCCCCcccEE----EcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccCHHHHHHHH
Q 011842 153 ELENNEYWGY----ITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCADFKAKL 228 (476)
Q Consensus 153 g~~~~~~~g~----~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~~~Le~~l 228 (476)
..-. ++... +-.|+.++-..++...| +..+..|.++..|.- .+--.+++++...
T Consensus 100 ~aA~-P~~L~iEgP~d~g~r~~QI~~l~~Lr-------------------~~L~~~g~~v~iVAD--EWCNT~eDI~~F~ 157 (248)
T PF07476_consen 100 EAAA-PFKLRIEGPMDAGSREAQIEALAELR-------------------EELDRRGINVEIVAD--EWCNTLEDIREFA 157 (248)
T ss_dssp HHHT-TS-EEEE-SB--SSHHHHHHHHHHHH-------------------HHHHHCT--EEEEE---TT--SHHHHHHHH
T ss_pred HhcC-CCeeeeeCCcCCCChHHHHHHHHHHH-------------------HHHHhcCCCCeEEee--hhcCCHHHHHHHH
Confidence 2211 12122 33466666666655444 345667887777752 3455788888887
Q ss_pred HcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCC
Q 011842 229 LQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGF 265 (476)
Q Consensus 229 ~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~ 265 (476)
+.... -+|-+ -|.-.|.+.+.-+-+-.|+++|+
T Consensus 158 da~A~--dmVQI--KtPDLGgi~ntieAvlyCk~~gv 190 (248)
T PF07476_consen 158 DAKAA--DMVQI--KTPDLGGINNTIEAVLYCKEHGV 190 (248)
T ss_dssp HTT-S--SEEEE---GGGGSSTHHHHHHHHHHHHTT-
T ss_pred hcCCc--CEEEe--cCCCccchhhHHHHHHHHHhcCC
Confidence 65421 15555 45568999998888889999998
No 459
>smart00642 Aamy Alpha-amylase domain.
Probab=24.08 E-value=66 Score=28.71 Aligned_cols=30 Identities=13% Similarity=0.248 Sum_probs=26.2
Q ss_pred CccccccCHHHHHHHHHHhCCCCCceEEEEecCcc
Q 011842 245 TVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALF 279 (476)
Q Consensus 245 t~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~ 279 (476)
...|..++++++++-|+++|+ .+++|-+..
T Consensus 64 ~~~Gt~~d~~~lv~~~h~~Gi-----~vilD~V~N 93 (166)
T smart00642 64 PRFGTMEDFKELVDAAHARGI-----KVILDVVIN 93 (166)
T ss_pred cccCCHHHHHHHHHHHHHCCC-----EEEEEECCC
Confidence 355888999999999999999 999998853
No 460
>KOG2741 consensus Dimeric dihydrodiol dehydrogenase [Carbohydrate transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=23.93 E-value=4.1e+02 Score=26.79 Aligned_cols=110 Identities=12% Similarity=0.137 Sum_probs=59.8
Q ss_pred HHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHh-hCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccCHHHH
Q 011842 146 DWFARLWELENNEYWGYITNCGTEGNLHGILVGRE-VFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCADF 224 (476)
Q Consensus 146 ~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~-~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~~~L 224 (476)
+..+.+..++.+. -.++.-++-+...|...|.. ..| ....|.|+...++--.+++++|+.. .+.+.
T Consensus 20 ~f~~al~~~p~s~--~~Ivava~~s~~~A~~fAq~~~~~------~~k~y~syEeLakd~~vDvVyi~~~-----~~qH~ 86 (351)
T KOG2741|consen 20 DFVRALHTLPESN--HQIVAVADPSLERAKEFAQRHNIP------NPKAYGSYEELAKDPEVDVVYISTP-----NPQHY 86 (351)
T ss_pred HHHHHhccCcccC--cEEEEEecccHHHHHHHHHhcCCC------CCccccCHHHHhcCCCcCEEEeCCC-----CccHH
Confidence 3334444555333 23333333355555544432 122 2335667887777777788888764 23333
Q ss_pred HH---HHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCccc
Q 011842 225 KA---KLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFG 280 (476)
Q Consensus 225 e~---~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g 280 (476)
|= +|.. .+ -|.+.-|. .-.++..++|.+.|++.|+ +..||.|.-
T Consensus 87 evv~l~l~~-~K---~VL~EKPl--a~n~~e~~~iveaA~~rgv------~~meg~~~R 133 (351)
T KOG2741|consen 87 EVVMLALNK-GK---HVLCEKPL--AMNVAEAEEIVEAAEARGV------FFMEGLWWR 133 (351)
T ss_pred HHHHHHHHc-CC---cEEecccc--cCCHHHHHHHHHHHHHcCc------EEEeeeeee
Confidence 22 2332 22 24443332 2346788999999999886 677887653
No 461
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=23.85 E-value=7.5e+02 Score=24.95 Aligned_cols=92 Identities=14% Similarity=0.033 Sum_probs=46.6
Q ss_pred CchhHHHHHHHHHHhhCCCc-EEEecCCCchHHHHHHHH-cCCeEEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeC
Q 011842 166 CGTEGNLHGILVGREVFPDG-ILYASRESHYSVFKAARM-YRMECVKVDCLISGEIDCADFKAKLLQNKDKPAIINVNIG 243 (476)
Q Consensus 166 ggt~An~~al~aa~~~~p~~-~Vl~s~~~H~S~~~~~~~-~G~~v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~g 243 (476)
+|..+-..+-..++. .+. .|++..-......+.+.. .+.++..+.+|- .|.+.|++.+.+.. +|+-..|
T Consensus 6 ~G~vG~~~~~~L~~~--~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~---~~~~~l~~~~~~~d----vVin~~g 76 (386)
T PF03435_consen 6 AGRVGSAIARLLARR--GPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDV---NDPESLAELLRGCD----VVINCAG 76 (386)
T ss_dssp -SHHHHHHHHHHHCT--TCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--T---TTHHHHHHHHTTSS----EEEE-SS
T ss_pred CcHHHHHHHHHHhcC--CCCCcEEEEECCHHHHHHHHhhccccceeEEEEec---CCHHHHHHHHhcCC----EEEECCc
Confidence 355555544443333 332 555544444444444433 445555555542 27888999887763 4444444
Q ss_pred CCccccccCHHHHHHHHHHhCCCCCceEEEEecCc
Q 011842 244 TTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGAL 278 (476)
Q Consensus 244 tt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~ 278 (476)
.. --..|++.|-++|+ -++|-++
T Consensus 77 p~------~~~~v~~~~i~~g~------~yvD~~~ 99 (386)
T PF03435_consen 77 PF------FGEPVARACIEAGV------HYVDTSY 99 (386)
T ss_dssp GG------GHHHHHHHHHHHT-------EEEESS-
T ss_pred cc------hhHHHHHHHHHhCC------Ceeccch
Confidence 32 23477888888886 4667443
No 462
>cd00491 4Oxalocrotonate_Tautomerase 4-Oxalocrotonate Tautomerase: Catalyzes the isomerization of unsaturated ketones. The structure is a homohexamer that is arranged as a trimer of dimers. The hexamer contains six active sites, each formed by residues from three monomers, two from one dimer and the third from a neighboring monomer. Each monomer is a beta-alpha-beta fold with two small beta strands at the C-terminus that fold back on themselves. A pair of monomers form a dimer with two-fold symmetry, consisting of a 4-stranded beta sheet with two helices on one side and two additional small beta strands at each end. The dimers are assembled around a 3-fold axis of rotation to form a hexamer, with the short beta strands from each dimer contacting the neighboring dimers.
Probab=23.81 E-value=2.1e+02 Score=19.85 Aligned_cols=30 Identities=10% Similarity=0.226 Sum_probs=25.3
Q ss_pred EEEEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 011842 422 IAHVVVMPNVTIDKLDDFLNELIENRSTWY 451 (476)
Q Consensus 422 ~lRv~~~~~~T~edid~~~~~l~~~~~~~~ 451 (476)
.+++.+....|.|+-.++.++|.++..+..
T Consensus 2 ~i~i~~~~grt~eqk~~l~~~i~~~l~~~~ 31 (58)
T cd00491 2 FVQIYILEGRTDEQKRELIERVTEAVSEIL 31 (58)
T ss_pred EEEEEEcCCCCHHHHHHHHHHHHHHHHHHh
Confidence 467777777899999999999999887765
No 463
>PLN00125 Succinyl-CoA ligase [GDP-forming] subunit alpha
Probab=23.68 E-value=1.4e+02 Score=29.46 Aligned_cols=67 Identities=9% Similarity=-0.009 Sum_probs=42.4
Q ss_pred cCCCchHHHHHHHH--cCCeEEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCC
Q 011842 190 SRESHYSVFKAARM--YRMECVKVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGF 265 (476)
Q Consensus 190 s~~~H~S~~~~~~~--~G~~v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~ 265 (476)
.-+.|.|+..+... -.+-++.+|.. .-++.+++.++... +.+|+++.|....| -.+++.++++++|+
T Consensus 54 G~~~y~sv~dlp~~~~~DlAvI~vPa~----~v~~al~e~~~~Gv--k~~vIisaGf~e~g---~~~~~~~~ar~~gi 122 (300)
T PLN00125 54 GLPVFNTVAEAKAETKANASVIYVPPP----FAAAAILEAMEAEL--DLVVCITEGIPQHD---MVRVKAALNRQSKT 122 (300)
T ss_pred CeeccCCHHHHhhccCCCEEEEecCHH----HHHHHHHHHHHcCC--CEEEEECCCCCccc---HHHHHHHHHhhcCC
Confidence 44566777766543 23344555532 24566777766443 36888888887776 34566678999998
No 464
>cd06449 ACCD Aminocyclopropane-1-carboxylate deaminase (ACCD): Pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of 1-aminocyclopropane-L-carboxylate (ACC), a precursor of the plant hormone ethylene, to alpha-ketobutyrate and ammonia.
Probab=23.60 E-value=4.6e+02 Score=25.67 Aligned_cols=54 Identities=11% Similarity=0.008 Sum_probs=32.9
Q ss_pred EEEcCCchhHHHHH-HHHH-HhhCCCcEEEecCCCc--------hHHHHHHHHcCCeEEEEeCC
Q 011842 161 GYITNCGTEGNLHG-ILVG-REVFPDGILYASRESH--------YSVFKAARMYRMECVKVDCL 214 (476)
Q Consensus 161 g~~t~ggt~An~~a-l~aa-~~~~p~~~Vl~s~~~H--------~S~~~~~~~~G~~v~~v~~~ 214 (476)
.+++.|||.+|... +.++ +...-..+|+++...- ..-...++.+|++++.++.+
T Consensus 54 ~vv~~ggs~GN~g~alA~~a~~~G~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~Ga~v~~~~~~ 117 (307)
T cd06449 54 TLVTVGGIQSNHTRQVAAVAAKLGLKCVLVQENWVPYSDAVYDRVGNILLSRIMGADVRLVSAG 117 (307)
T ss_pred EEEECCCchhHHHHHHHHHHHHcCCeEEEEecCCCCcccccccccccHHHHHHCCCEEEEECCc
Confidence 67888888888743 3222 2222234666665432 13355678899999988754
No 465
>PLN03013 cysteine synthase
Probab=23.51 E-value=4.8e+02 Score=27.24 Aligned_cols=53 Identities=13% Similarity=-0.043 Sum_probs=38.7
Q ss_pred EEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCC
Q 011842 161 GYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCL 214 (476)
Q Consensus 161 g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~ 214 (476)
.+-.++|..+.-+|..+... .=...|++++.....-...++.+|++++.++.+
T Consensus 178 VVeaSSGN~G~ALA~~a~~~-G~~~~VvvP~~~s~~K~~~ira~GAeVi~v~~~ 230 (429)
T PLN03013 178 LVEPTSGNTGIGLAFIAASR-GYRLILTMPASMSMERRVLLKAFGAELVLTDPA 230 (429)
T ss_pred EEEECCcHHHHHHHHHHHHc-CCCEEEEECCCCcHHHHHHHHHcCCEEEEECCC
Confidence 45556777777777665543 234578888877777788999999999988754
No 466
>PRK11761 cysM cysteine synthase B; Provisional
Probab=23.42 E-value=3e+02 Score=26.95 Aligned_cols=52 Identities=15% Similarity=0.018 Sum_probs=37.0
Q ss_pred EEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeC
Q 011842 161 GYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDC 213 (476)
Q Consensus 161 g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~ 213 (476)
.+..++|..+.-+|..+... .=...|++++..-..-.+.++.+|++++.++.
T Consensus 66 vv~aSsGN~g~alA~~a~~~-G~~~~i~~p~~~~~~k~~~~~~~GA~v~~~~~ 117 (296)
T PRK11761 66 LIEATSGNTGIALAMIAAIK-GYRMKLIMPENMSQERRAAMRAYGAELILVPK 117 (296)
T ss_pred EEEeCCChHHHHHHHHHHHc-CCCEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 55556777777666655442 23457888876666777888999999999985
No 467
>PRK09545 znuA high-affinity zinc transporter periplasmic component; Reviewed
Probab=22.96 E-value=4.6e+02 Score=25.91 Aligned_cols=72 Identities=6% Similarity=-0.057 Sum_probs=41.9
Q ss_pred CcEEEecCCCchHHHHHHHHcCCeEEE-EeCCCCCccCHHHHHHHHHcCCC-CcEEEEEeeCCCccccccCHHHHHHHHH
Q 011842 184 DGILYASRESHYSVFKAARMYRMECVK-VDCLISGEIDCADFKAKLLQNKD-KPAIINVNIGTTVKGAVDDLDLVIQTLE 261 (476)
Q Consensus 184 ~~~Vl~s~~~H~S~~~~~~~~G~~v~~-v~~~~~g~~D~~~Le~~l~~~~~-~p~~vv~t~gtt~tG~id~l~~I~~ia~ 261 (476)
+..+++ .|.++...++.+|+++.. +...++....+.+|.+.++.-.. ...+|++. +.. +-+.+-.+++
T Consensus 203 ~~~~i~---~H~af~Yf~~~ygl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e-~~~------~~~~~~~la~ 272 (311)
T PRK09545 203 GKGYFV---FHDAYGYFEKHYGLTPLGHFTVNPEIQPGAQRLHEIRTQLVEQKATCVFAE-PQF------RPAVIESVAK 272 (311)
T ss_pred CCcEEE---ECchHHHHHHhCCCceeeeeccCCCCCCCHHHHHHHHHHHHHcCCCEEEec-CCC------ChHHHHHHHH
Confidence 334555 788888899999998654 33344455667776666543211 11244443 322 2255667778
Q ss_pred HhCC
Q 011842 262 ESGF 265 (476)
Q Consensus 262 ~~g~ 265 (476)
+.|+
T Consensus 273 e~g~ 276 (311)
T PRK09545 273 GTSV 276 (311)
T ss_pred hcCC
Confidence 8887
No 468
>cd07018 S49_SppA_67K_type Signal peptide peptidase A (SppA) 67K type, a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 67K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily contain an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Unlike the eukaryotic functional homologs that are proposed to be aspartic proteases, site-directed mutagenesis and sequence analysis have shown that members in this subfamily, mostly bacterial, are serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys
Probab=22.92 E-value=4.6e+02 Score=24.39 Aligned_cols=90 Identities=17% Similarity=0.151 Sum_probs=51.2
Q ss_pred ccCHHHHHHHHHcCC--CCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCc
Q 011842 218 EIDCADFKAKLLQNK--DKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFK 295 (476)
Q Consensus 218 ~~D~~~Le~~l~~~~--~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~ 295 (476)
...++.|.+.|++.. .+...|++. ..++-|....+++|.+..++..-.+..++.+++++.+++++- .
T Consensus 28 ~~~~~~l~~~l~~a~~d~~ik~vvL~-~~s~gg~~~~~~el~~~i~~~~~~~kpVia~~~~~~sggy~l----------a 96 (222)
T cd07018 28 ELSLRDLLEALEKAAEDDRIKGIVLD-LDGLSGGLAKLEELRQALERFRASGKPVIAYADGYSQGQYYL----------A 96 (222)
T ss_pred CccHHHHHHHHHHHhcCCCeEEEEEE-CCCCCCCHHHHHHHHHHHHHHHHhCCeEEEEeCCCCchhhhh----------h
Confidence 456777887776532 223345554 455677888888888777643211123366777655444331 0
Q ss_pred ccccEEEEcCCCCCCCCCCceeEEee
Q 011842 296 KPIGSVSVSGHKFVGCPMPCGVQITR 321 (476)
Q Consensus 296 ~~~Dsi~~s~hK~l~~p~~~G~l~~~ 321 (476)
..+|-|..++.-.++. +|++..+
T Consensus 97 saad~I~a~p~~~vg~---iGv~~~~ 119 (222)
T cd07018 97 SAADEIYLNPSGSVEL---TGLSAET 119 (222)
T ss_pred hhCCEEEECCCceEEe---eccchhh
Confidence 1278888877666553 5555433
No 469
>PF07131 DUF1382: Protein of unknown function (DUF1382); InterPro: IPR009814 This entry is represented by Bacteriophage lambda, Xis. This entry overlaps with IPR009750, both representing lambda Xis. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several hypothetical Escherichia coli and Bacteriophage lambda-like proteins of around 60 residues in length. The function of this family is unknown.
Probab=22.90 E-value=1.7e+02 Score=21.34 Aligned_cols=30 Identities=17% Similarity=0.163 Sum_probs=24.4
Q ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 011842 421 NIAHVVVMPNVTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 421 ~~lRv~~~~~~T~edid~~~~~l~~~~~~~ 450 (476)
..+|++.+|-.|++|...|-..+.+-+.++
T Consensus 22 ~GIRFVpiPv~~dee~~~L~s~~~~kLe~m 51 (61)
T PF07131_consen 22 IGIRFVPIPVVTDEEFHTLSSQLSQKLERM 51 (61)
T ss_pred cCceeeccccccHHHHHHHHHHHHHHHHHH
Confidence 457999999999999999988887766554
No 470
>cd01561 CBS_like CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.
Probab=22.60 E-value=6.8e+02 Score=24.19 Aligned_cols=53 Identities=11% Similarity=-0.066 Sum_probs=34.6
Q ss_pred EEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCC
Q 011842 161 GYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCL 214 (476)
Q Consensus 161 g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~ 214 (476)
.+..++|..+.-+|..+.+. .=...|+++...-..-....+.+|++++.++.+
T Consensus 56 vv~~SsGN~g~alA~~a~~~-G~~~~i~vp~~~~~~k~~~~~~~Ga~v~~~~~~ 108 (291)
T cd01561 56 IIEPTSGNTGIGLAMVAAAK-GYRFIIVMPETMSEEKRKLLRALGAEVILTPEA 108 (291)
T ss_pred EEEeCCChHHHHHHHHHHHc-CCeEEEEECCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 34445555555555544332 234578888776667778888999999988754
No 471
>TIGR00381 cdhD CO dehydrogenase/acetyl-CoA synthase, delta subunit. This is the small subunit of a heterodimer which catalyzes the reaction CO + H2O + Acceptor = CO2 + Reduced acceptor and is involved in the synthesis of acetyl-CoA from CO2 and H2.
Probab=22.46 E-value=3.9e+02 Score=27.42 Aligned_cols=61 Identities=11% Similarity=0.055 Sum_probs=39.9
Q ss_pred HHcCCeEEEEeCCCCCccCHHHHHHHHHcCCC-CcEEEEEeeCCCcccccc-CHHHHHHHHHHhCCCCCceEEEEec
Q 011842 202 RMYRMECVKVDCLISGEIDCADFKAKLLQNKD-KPAIINVNIGTTVKGAVD-DLDLVIQTLEESGFTQDRFYIHCDG 276 (476)
Q Consensus 202 ~~~G~~v~~v~~~~~g~~D~~~Le~~l~~~~~-~p~~vv~t~gtt~tG~id-~l~~I~~ia~~~g~~~~~~~lhvD~ 276 (476)
...++.++..-+ .+-.-|++.|++.++.... +|.+-.+| .+ ++++++++|++||. .+++=+
T Consensus 185 ~av~vPLIL~gs-g~~~kD~eVLeaaLe~~~G~kpLL~SAt--------~e~Ny~~ia~lAk~yg~-----~Vvv~s 247 (389)
T TIGR00381 185 QAVDVPIVIGGS-GNPEKDPLVLEKAAEVAEGERCLLASAN--------LDLDYEKIANAAKKYGH-----VVLSWT 247 (389)
T ss_pred HhCCCCEEEeCC-CCCcCCHHHHHHHHHHhCCCCcEEEecC--------chhhHHHHHHHHHHhCC-----eEEEEc
Confidence 334555544322 1234599999999987644 55544443 33 89999999999998 676543
No 472
>cd02007 TPP_DXS Thiamine pyrophosphate (TPP) family, DXS subfamily, TPP-binding module; 1-Deoxy-D-xylulose-5-phosphate synthase (DXS) is a regulatory enzyme of the mevalonate-independent pathway involved in terpenoid biosynthesis. Terpeniods are plant natural products with important pharmaceutical activity. DXS catalyzes a transketolase-type condensation of pyruvate with D-glyceraldehyde-3-phosphate to form 1-deoxy-D-xylulose-5-phosphate (DXP) and carbon dioxide. The formation of DXP leads to the formation of the terpene precursor IPP (isopentyl diphosphate) and to the formation of thiamine (vitamin B1) and pyridoxal (vitamin B6).
Probab=22.31 E-value=5.7e+02 Score=23.30 Aligned_cols=67 Identities=7% Similarity=0.036 Sum_probs=34.3
Q ss_pred HHHHHHHHHhhCCCcEEEecCCCch------HHHHHHHHcCCeEEEEeCCCCCccCHHHHHHHHHc--CCCCcEEEEEe
Q 011842 171 NLHGILVGREVFPDGILYASRESHY------SVFKAARMYRMECVKVDCLISGEIDCADFKAKLLQ--NKDKPAIINVN 241 (476)
Q Consensus 171 n~~al~aa~~~~p~~~Vl~s~~~H~------S~~~~~~~~G~~v~~v~~~~~g~~D~~~Le~~l~~--~~~~p~~vv~t 241 (476)
+..++..+.....+.++++.+..+. .....++..|.++.. ++| | -|++++.+++++ ..++|.+|.+.
T Consensus 114 ~~Eal~~A~~~~~~li~vvdnN~~~~~~~~~~~~~~~~a~G~~~~~-~vd--G-~d~~~l~~a~~~a~~~~~P~~I~~~ 188 (195)
T cd02007 114 AFEALNNAGYLKSNMIVILNDNEMSISPNVGTPGNLFEELGFRYIG-PVD--G-HNIEALIKVLKEVKDLKGPVLLHVV 188 (195)
T ss_pred HHHHHHHHHHhCCCEEEEEECCCcccCCCCCCHHHHHHhcCCCccc-eEC--C-CCHHHHHHHHHHHHhCCCCEEEEEE
Confidence 3455555554423334444443321 233444556666554 122 2 278888888764 24567776664
No 473
>cd03315 MLE_like Muconate lactonizing enzyme (MLE) like subgroup of the enolase superfamily. Enzymes of this subgroup share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and residues that can function as general acid/base catalysts, a Lys-X-Lys motif and another conserved lysine. Despite these conserved residues, the members of the MLE subgroup, like muconate lactonizing enzyme, o-succinylbenzoate synthase (OSBS) and N-acylamino acid racemase (NAAAR), catalyze different reactions.
Probab=22.26 E-value=6.5e+02 Score=23.91 Aligned_cols=43 Identities=19% Similarity=0.225 Sum_probs=29.9
Q ss_pred cCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCC
Q 011842 219 IDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGF 265 (476)
Q Consensus 219 ~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~ 265 (476)
.++.++++.++...- -+|.+ -.+..|.+.+..+++++|+++|+
T Consensus 190 ~~~~~~~~~i~~~~~--d~v~~--k~~~~GGi~~~~~~~~~A~~~gi 232 (265)
T cd03315 190 FTPHDAFRELALGAA--DAVNI--KTAKTGGLTKAQRVLAVAEALGL 232 (265)
T ss_pred CCHHHHHHHHHhCCC--CEEEE--ecccccCHHHHHHHHHHHHHcCC
Confidence 467777777765421 13333 45566888888999999999988
No 474
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=22.03 E-value=4e+02 Score=21.04 Aligned_cols=63 Identities=11% Similarity=0.076 Sum_probs=37.3
Q ss_pred chHHHHHHHHcCCeEEEEeCCCCCccCHH--HHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCC
Q 011842 194 HYSVFKAARMYRMECVKVDCLISGEIDCA--DFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGF 265 (476)
Q Consensus 194 H~S~~~~~~~~G~~v~~v~~~~~g~~D~~--~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~ 265 (476)
-..+...++-.|.+.+.. ..++..... .|+..+.+. + +|++....... +-...+.+.|+++|+
T Consensus 12 ~~~~~~~~~~~G~~~~~h--g~~~~~~~~~~~l~~~i~~a-D---~VIv~t~~vsH---~~~~~vk~~akk~~i 76 (97)
T PF10087_consen 12 ERRYKRILEKYGGKLIHH--GRDGGDEKKASRLPSKIKKA-D---LVIVFTDYVSH---NAMWKVKKAAKKYGI 76 (97)
T ss_pred HHHHHHHHHHcCCEEEEE--ecCCCCccchhHHHHhcCCC-C---EEEEEeCCcCh---HHHHHHHHHHHHcCC
Confidence 345777788889988877 222333333 366666433 2 44443333222 234778889999998
No 475
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=21.98 E-value=4.9e+02 Score=24.30 Aligned_cols=82 Identities=11% Similarity=0.005 Sum_probs=35.1
Q ss_pred EEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCc-hHHHHHHHHcCCeEEEEeCCCCCccCHHHHHHHHHc---CCCCcE
Q 011842 161 GYITNCGTEGNLHGILVGREVFPDGILYASRESH-YSVFKAARMYRMECVKVDCLISGEIDCADFKAKLLQ---NKDKPA 236 (476)
Q Consensus 161 g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H-~S~~~~~~~~G~~v~~v~~~~~g~~D~~~Le~~l~~---~~~~p~ 236 (476)
.++.+||+.++=.++.-..-. .|..|+...... .......+..+.++..+..|-. |.+++++.+++ ...++-
T Consensus 10 ~~lItGas~gIG~aia~~l~~-~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~---~~~~~~~~~~~~~~~~g~iD 85 (251)
T PRK12481 10 VAIITGCNTGLGQGMAIGLAK-AGADIVGVGVAEAPETQAQVEALGRKFHFITADLI---QQKDIDSIVSQAVEVMGHID 85 (251)
T ss_pred EEEEeCCCchHHHHHHHHHHH-CCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCC---CHHHHHHHHHHHHHHcCCCC
Confidence 445556666655444332221 454444322211 1112222334556666665522 45555554432 222233
Q ss_pred EEEEeeCCCc
Q 011842 237 IINVNIGTTV 246 (476)
Q Consensus 237 ~vv~t~gtt~ 246 (476)
+++-+.|...
T Consensus 86 ~lv~~ag~~~ 95 (251)
T PRK12481 86 ILINNAGIIR 95 (251)
T ss_pred EEEECCCcCC
Confidence 5555555433
No 476
>PF04273 DUF442: Putative phosphatase (DUF442); InterPro: IPR005939 Although this domain is uncharacterised it seems likely that it performs a phosphatase function.; GO: 0016787 hydrolase activity; PDB: 2F46_A 3GXH_B 3GXG_B.
Probab=21.61 E-value=1.5e+02 Score=24.47 Aligned_cols=46 Identities=22% Similarity=0.228 Sum_probs=25.4
Q ss_pred HHHHHHHHcCCeEEEEeCCCCCccCHH---HHHHHHHcCCCCcEEEEEeeC
Q 011842 196 SVFKAARMYRMECVKVDCLISGEIDCA---DFKAKLLQNKDKPAIINVNIG 243 (476)
Q Consensus 196 S~~~~~~~~G~~v~~v~~~~~g~~D~~---~Le~~l~~~~~~p~~vv~t~g 243 (476)
.+..+++.+|+..+.+|+.. +.++.+ .+.+++.... +|+++.+-+|
T Consensus 48 ~~~~~a~~~Gl~y~~iPv~~-~~~~~~~v~~f~~~l~~~~-~Pvl~hC~sG 96 (110)
T PF04273_consen 48 EEAAAAEALGLQYVHIPVDG-GAITEEDVEAFADALESLP-KPVLAHCRSG 96 (110)
T ss_dssp CHHHHHHHCT-EEEE----T-TT--HHHHHHHHHHHHTTT-TSEEEE-SCS
T ss_pred HHHHHHHHcCCeEEEeecCC-CCCCHHHHHHHHHHHHhCC-CCEEEECCCC
Confidence 35688999999999999974 345544 4555666554 5777766554
No 477
>PF03162 Y_phosphatase2: Tyrosine phosphatase family; InterPro: IPR004861 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity. Consequently, maintaining an appropriate level of protein tyrosine phosphorylation is essential for many cellular functions. Tyrosine-specific protein phosphatases (PTPase; 3.1.3.48 from EC) catalyse the removal of a phosphate group attached to a tyrosine residue, using a cysteinyl-phosphate enzyme intermediate. These enzymes are key regulatory components in signal transduction pathways (such as the MAP kinase pathway) and cell cycle control, and are important in the control of cell growth, proliferation, differentiation and transformation [, ]. The PTP superfamily can be divided into four subfamilies []: (1) pTyr-specific phosphatases (2) dual specificity phosphatases (dTyr and dSer/dThr) (3) Cdc25 phosphatases (dTyr and/or dThr) (4) LMW (low molecular weight) phosphatases Based on their cellular localisation, PTPases are also classified as: Receptor-like, which are transmembrane receptors that contain PTPase domains [] Non-receptor (intracellular) PTPases [] All PTPases carry the highly conserved active site motif C(X)5R (PTP signature motif), employ a common catalytic mechanism, and share a similar core structure made of a central parallel beta-sheet with flanking alpha-helices containing a beta-loop-alpha-loop that encompasses the PTP signature motif []. Functional diversity between PTPases is endowed by regulatory domains and subunits. This entry represents protein-tyrosine phosphatases predominantly from fungi, plants and bacteria, several of which are putative enzymes. These proteins are closely related to the Y-phosphatase and DSPc families. This entry includes the PTPase SIW14 from Saccharomyces cerevisiae (Baker's yeast), which plays a role in actin filament organisation and endocytosis.; PDB: 2Q47_A 1XRI_A.
Probab=21.54 E-value=1.3e+02 Score=26.90 Aligned_cols=56 Identities=18% Similarity=0.233 Sum_probs=31.2
Q ss_pred hHHHHHHHHcCCeEEEEeCCCCC----ccCHHHHHHHHH---cCCCCcEEEEEeeCCCccccc
Q 011842 195 YSVFKAARMYRMECVKVDCLISG----EIDCADFKAKLL---QNKDKPAIINVNIGTTVKGAV 250 (476)
Q Consensus 195 ~S~~~~~~~~G~~v~~v~~~~~g----~~D~~~Le~~l~---~~~~~p~~vv~t~gtt~tG~i 250 (476)
......++-.|++...++..... .++.+.+.++|+ .....|.+|...+|...||.+
T Consensus 46 ~~~~~f~~~~~I~l~~~~~~~~~~~~~~~~~~~v~~aL~~ild~~n~PvLiHC~~G~~rTG~v 108 (164)
T PF03162_consen 46 QDFLEFAEENGIKLIHIPMSSSKDPWVPISEEQVAEALEIILDPRNYPVLIHCNHGKDRTGLV 108 (164)
T ss_dssp HHHHHHHHHTT-EEEE-------GGG----HHHHHHHHHHHH-GGG-SEEEE-SSSSSHHHHH
T ss_pred HHHHHHHhhcCceEEEeccccccCccccCCHHHHHHHHHHHhCCCCCCEEEEeCCCCcchhhH
Confidence 44556777889999888886432 356666766553 234569999999999999876
No 478
>COG1606 ATP-utilizing enzymes of the PP-loop superfamily [General function prediction only]
Probab=21.53 E-value=5.1e+02 Score=25.04 Aligned_cols=96 Identities=14% Similarity=0.172 Sum_probs=55.3
Q ss_pred EEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchH----H---HHHHHHcCCeEEEEeCCCCCccCHHHHHHHHHcCCC
Q 011842 161 GYITNCGTEGNLHGILVGREVFPDGILYASRESHYS----V---FKAARMYRMECVKVDCLISGEIDCADFKAKLLQNKD 233 (476)
Q Consensus 161 g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S----~---~~~~~~~G~~v~~v~~~~~g~~D~~~Le~~l~~~~~ 233 (476)
.+..|||..+.+.+..+.-.. .+.++.++-.+-+. + ...++..|++...++.+ .|+++ +..++.
T Consensus 21 ~vAfSGGvDSslLa~la~~~l-G~~v~AvTv~sP~~p~~e~e~A~~~A~~iGi~H~~i~~~---~~~~~-----~~~n~~ 91 (269)
T COG1606 21 VVAFSGGVDSSLLAKLAKEAL-GDNVVAVTVDSPYIPRREIEEAKNIAKEIGIRHEFIKMN---RMDPE-----FKENPE 91 (269)
T ss_pred EEEecCCccHHHHHHHHHHHh-ccceEEEEEecCCCChhhhhHHHHHHHHhCCcceeeehh---hcchh-----hccCCC
Confidence 566789999988887664432 23333333322222 2 24556669988888775 33321 122221
Q ss_pred CcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcc
Q 011842 234 KPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALF 279 (476)
Q Consensus 234 ~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~ 279 (476)
-+.. ...-+=...|.+.++++|. -+++||+-+
T Consensus 92 ~rCY---------~CK~~v~~~l~~~a~~~Gy-----d~V~dGtNa 123 (269)
T COG1606 92 NRCY---------LCKRAVYSTLVEEAEKRGY-----DVVADGTNA 123 (269)
T ss_pred Ccch---------HHHHHHHHHHHHHHHHcCC-----CEEEeCCcH
Confidence 0011 1222345778899999999 899999853
No 479
>TIGR00649 MG423 conserved hypothetical protein. Contains an ATP-binding domain at the N-terminal end of the protein. Possibly part of a superfamily of beta-lactmases
Probab=21.43 E-value=6e+02 Score=26.23 Aligned_cols=62 Identities=24% Similarity=0.226 Sum_probs=41.4
Q ss_pred cCCeEEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEE
Q 011842 204 YRMECVKVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIH 273 (476)
Q Consensus 204 ~G~~v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lh 273 (476)
.|+++.. ...-+|.-+.++|++.++.- +|..++..+| ....+.+.++++++.|+...++++.
T Consensus 348 ~~~~~~~-~~h~SgHa~~~dl~~~i~~~--~Pk~~ipvHg-----e~~~~~~~~~~a~~~g~~~~~~~~~ 409 (422)
T TIGR00649 348 VGARVIK-RIHVSGHASQEDHKLLLRLL--KPKYIIPVHG-----EYRMLINHTKLAEEEGYPGENIFIL 409 (422)
T ss_pred cCCEEEe-ceEecCCCCHHHHHHHHHHh--CCCEEEecCC-----cHHHHHHHHHHHHHcCCCcccEEEe
Confidence 4666543 22346888899999988754 3557777664 4557788888998888743445444
No 480
>PF02603 Hpr_kinase_N: HPr Serine kinase N terminus; InterPro: IPR011126 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents the N-terminal region of Hpr Serine/threonine kinase PtsK. This kinase is the sensor in a multicomponent phosphorelay system in control of carbon catabolic repression in bacteria []. This kinase in unusual in that it recognises the tertiary structure of its target and is a member of a novel family unrelated to any previously described protein phosphorylating enzymes []. X-ray analysis of the full-length crystalline enzyme from Staphylococcus xylosus at a resolution of 1.95 A shows the enzyme to consist of two clearly separated domains that are assembled in a hexameric structure resembling a three-bladed propeller. The blades are formed by two N-terminal domains each, and the compact central hub assembles the C-terminal kinase domains []. ; GO: 0000155 two-component sensor activity, 0004672 protein kinase activity, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay), 0006109 regulation of carbohydrate metabolic process; PDB: 1KNX_B 1KO7_A.
Probab=21.37 E-value=94 Score=26.33 Aligned_cols=42 Identities=21% Similarity=0.226 Sum_probs=22.9
Q ss_pred ccCHHHHHHHHHcC-CCCcEEEEEeeCCCccccccCHHHHHHHHHHhCC
Q 011842 218 EIDCADFKAKLLQN-KDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGF 265 (476)
Q Consensus 218 ~~D~~~Le~~l~~~-~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~ 265 (476)
.++.+.-++.+++- ...|.+++++.+. .+-+++.++|+++++
T Consensus 64 ~l~~~~r~~~l~~l~~~~~P~iIvt~~~------~~p~~l~e~a~~~~i 106 (127)
T PF02603_consen 64 SLDEEERKERLEKLFSYNPPCIIVTRGL------EPPPELIELAEKYNI 106 (127)
T ss_dssp CS-HHHHCCHHHHHCTTT-S-EEEETTT---------HHHHHHHHHCT-
T ss_pred HCCHHHHHHHHHHHhCCCCCEEEEECcC------CCCHHHHHHHHHhCC
Confidence 45666655555442 1223366676653 667999999999999
No 481
>cd03318 MLE Muconate Lactonizing Enzyme (MLE), an homooctameric enzyme, catalyses the conversion of cis,cis-muconate (CCM) to muconolactone (ML) in the catechol branch of the beta-ketoadipate pathway. This pathway is used in soil microbes to breakdown lignin-derived aromatics, catechol and protocatechuate, to citric acid cycle intermediates. Some bacterial species are also capable of dehalogenating chloroaromatic compounds by the action of chloromuconate lactonizing enzymes (Cl-MLEs). MLEs are members of the enolase superfamily characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and that is stabilized by coordination to the essential Mg2+ ion.
Probab=21.31 E-value=7.1e+02 Score=25.01 Aligned_cols=23 Identities=17% Similarity=0.235 Sum_probs=17.8
Q ss_pred CCCccccccCHHHHHHHHHHhCC
Q 011842 243 GTTVKGAVDDLDLVIQTLEESGF 265 (476)
Q Consensus 243 gtt~tG~id~l~~I~~ia~~~g~ 265 (476)
-.+..|.+.+..+++++|+++|+
T Consensus 269 d~~~~GGit~~~~~~~~a~~~gi 291 (365)
T cd03318 269 KIAKSGGLRRAQKVAAIAEAAGI 291 (365)
T ss_pred eecccCCHHHHHHHHHHHHHcCC
Confidence 34556778888888888888887
No 482
>TIGR01274 ACC_deam 1-aminocyclopropane-1-carboxylate deaminase. This pyridoxal phosphate-dependent enzyme degrades 1-aminocyclopropane-1-carboxylate, which in plants is a precursor of the ripening hormone ethylene, to ammonia and alpha-ketoglutarate. This model includes all members of this family for which function has been demonstrated experimentally, but excludes a closely related family often annotated as putative members of this family.
Probab=21.30 E-value=5.3e+02 Score=25.68 Aligned_cols=54 Identities=7% Similarity=-0.080 Sum_probs=32.5
Q ss_pred EEEcCCchhHHHHHHH-HHHhh-CCCcEEEecCCC--------chHHHHHHHHcCCeEEEEeCC
Q 011842 161 GYITNCGTEGNLHGIL-VGREV-FPDGILYASRES--------HYSVFKAARMYRMECVKVDCL 214 (476)
Q Consensus 161 g~~t~ggt~An~~al~-aa~~~-~p~~~Vl~s~~~--------H~S~~~~~~~~G~~v~~v~~~ 214 (476)
.+++.||+.+|..... ++... .=+..|++++.. ........+.+|++++.++.+
T Consensus 68 ~vvs~ggs~gN~g~alA~~a~~~Gl~~~iv~~~~~~~~~~~~~~~~~~~~~~~~GA~v~~v~~~ 131 (337)
T TIGR01274 68 TLVSIGGIQSNQTRQVAAVAAHLGMKCVLVQENWVNYSDAVYDRVGNIQLSRIMGADVRLDPDG 131 (337)
T ss_pred EEEECCCCcchHHHHHHHHHHHcCCcEEEEeccCCCccccchhccchHHHHHHcCCEEEEeCCc
Confidence 6678888888764322 22221 123456666532 124556788899999988854
No 483
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=21.17 E-value=4.9e+02 Score=26.52 Aligned_cols=52 Identities=15% Similarity=0.007 Sum_probs=34.4
Q ss_pred EEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeC
Q 011842 161 GYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDC 213 (476)
Q Consensus 161 g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~ 213 (476)
.+-.++|..+.-+|..+... .=+..|++++..-..-....+.+|++++.++.
T Consensus 114 vV~aSsGN~G~alA~~a~~~-G~~~~ivvp~~~~~~k~~~lr~~GA~Vi~~~~ 165 (368)
T PLN02556 114 LIEPTSGNMGISLAFMAAMK-GYKMILTMPSYTSLERRVTMRAFGAELVLTDP 165 (368)
T ss_pred EEEeCCchHHHHHHHHHHHc-CCCEEEEECCCCCHHHHHHHHHcCCEEEEECC
Confidence 44456666666666655432 23456777766555567788999999998874
No 484
>COG2240 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism]
Probab=20.98 E-value=3.1e+02 Score=26.86 Aligned_cols=79 Identities=9% Similarity=0.088 Sum_probs=43.6
Q ss_pred HHHHcCCeEEEEeCC----C------CC-ccCHHHHHHHHHcCCCCcEEEEEeeC-CCccccccCHHHHHHHHHHhCCCC
Q 011842 200 AARMYRMECVKVDCL----I------SG-EIDCADFKAKLLQNKDKPAIINVNIG-TTVKGAVDDLDLVIQTLEESGFTQ 267 (476)
Q Consensus 200 ~~~~~G~~v~~v~~~----~------~g-~~D~~~Le~~l~~~~~~p~~vv~t~g-tt~tG~id~l~~I~~ia~~~g~~~ 267 (476)
..+.+|+++..+|+- . .| .+-.++|++.++.-..+....-+... |.+.|....++.|+++.++.....
T Consensus 23 ~lq~~G~~V~~vpTV~fSnHtgyg~~~g~v~~~e~l~~~l~~l~~~~~~~~~davltGYlgs~~qv~~i~~~v~~vk~~~ 102 (281)
T COG2240 23 PLQRLGLDVWAVPTVQFSNHTGYGKWTGIVMPPEQLADLLNGLEAIDKLGECDAVLTGYLGSAEQVRAIAGIVKAVKEAN 102 (281)
T ss_pred HHHHcCCceeeeceEEecCCCCCCCCCCcCCCHHHHHHHHHHHHhcccccccCEEEEccCCCHHHHHHHHHHHHHHhccC
Confidence 345567776666541 0 12 24556777766532111112112211 445677777888888888766555
Q ss_pred CceEEEEecCc
Q 011842 268 DRFYIHCDGAL 278 (476)
Q Consensus 268 ~~~~lhvD~a~ 278 (476)
++.++++|=+.
T Consensus 103 P~~~~l~DPVM 113 (281)
T COG2240 103 PNALYLCDPVM 113 (281)
T ss_pred CCeEEEeCCcc
Confidence 56678888664
No 485
>PRK03910 D-cysteine desulfhydrase; Validated
Probab=20.60 E-value=4e+02 Score=26.47 Aligned_cols=54 Identities=11% Similarity=-0.013 Sum_probs=32.9
Q ss_pred EEEcCCchhHHHH-HHHHH-HhhCCCcEEEecCCCch--------HHHHHHHHcCCeEEEEeCC
Q 011842 161 GYITNCGTEGNLH-GILVG-REVFPDGILYASRESHY--------SVFKAARMYRMECVKVDCL 214 (476)
Q Consensus 161 g~~t~ggt~An~~-al~aa-~~~~p~~~Vl~s~~~H~--------S~~~~~~~~G~~v~~v~~~ 214 (476)
.++|+|++.+|.. |+.++ +...=...|+++...-. .-...++.+|++++.++.+
T Consensus 66 ~vvt~g~s~gN~g~alA~~a~~~G~~~~i~vp~~~~~~~~~~~~~~~~~~~~~~Ga~vi~~~~~ 129 (331)
T PRK03910 66 TLITAGAIQSNHARQTAAAAAKLGLKCVLLLENPVPTEAENYLANGNVLLDDLFGAEIHVVPAG 129 (331)
T ss_pred EEEEcCcchhHHHHHHHHHHHHhCCcEEEEEcCCCCcccccccCCCcHHHHHHcCCEEEEeCcc
Confidence 5778888888774 33332 22222446666654432 2336788899999988754
No 486
>cd01562 Thr-dehyd Threonine dehydratase: The first step in amino acid degradation is the removal of nitrogen. Although the nitrogen atoms of most amino acids are transferred to alpha-ketoglutarate before removal, the alpha-amino group of threonine can be directly converted into NH4+. The direct deamination is catalyzed by threonine dehydratase, in which pyridoxal phosphate (PLP) is the prosthetic group. Threonine dehydratase is widely distributed in all three major phylogenetic divisions.
Probab=20.48 E-value=4e+02 Score=25.89 Aligned_cols=53 Identities=11% Similarity=-0.044 Sum_probs=33.5
Q ss_pred EEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCC
Q 011842 161 GYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCL 214 (476)
Q Consensus 161 g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~ 214 (476)
.+.+++|..+.-+|..++.. .=+..+++++..-..-...++.+|++++.++.+
T Consensus 68 iv~~ssGN~g~alA~~a~~~-G~~~~ivvp~~~~~~k~~~l~~~Ga~vi~~~~~ 120 (304)
T cd01562 68 VVAASAGNHAQGVAYAAKLL-GIPATIVMPETAPAAKVDATRAYGAEVVLYGED 120 (304)
T ss_pred EEEECCCHHHHHHHHHHHHc-CCCEEEEECCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 44455555555555554432 234567777665455667888899999888753
No 487
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=20.33 E-value=2.3e+02 Score=27.17 Aligned_cols=27 Identities=19% Similarity=0.228 Sum_probs=23.0
Q ss_pred cccccCHHHHHHHHHHhCCCCCceEEEEecCc
Q 011842 247 KGAVDDLDLVIQTLEESGFTQDRFYIHCDGAL 278 (476)
Q Consensus 247 tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~ 278 (476)
.|...+.+++.++++++++ -+++|+.|
T Consensus 48 ~G~l~~~~~l~~~l~~~~i-----~~VIDATH 74 (248)
T PRK08057 48 VGGFGGAEGLAAYLREEGI-----DLVIDATH 74 (248)
T ss_pred ECCCCCHHHHHHHHHHCCC-----CEEEECCC
Confidence 3555577999999999999 89999998
No 488
>PF01902 ATP_bind_4: ATP-binding region; InterPro: IPR002761 This domain is about 200 amino acids long with a strongly conserved motif SGGKD at the N-terminal. The structure of Q8U2K6 from SWISSPROT from Pyrococcus furiosus has been resolved to 2.7A and is suggested to be a putative N-type pytophosphatase. In some members of the family e.g. Q12429 from SWISSPROT, this domain is associated with IPR006175 from INTERPRO, another domain of unknown function. Proteins with this uncharacterised domain include two apparent ortholog families in the archaea, one of which is universal among the first four completed archaeal genomes. The domain comprises the full length of the archaeal proteins and the first third of fungal proteins.; PDB: 3RK0_A 3RK1_A 3RJZ_A 2D13_D.
Probab=20.29 E-value=4.7e+02 Score=24.48 Aligned_cols=95 Identities=18% Similarity=0.095 Sum_probs=48.9
Q ss_pred EEEcCCchhHHHHHHHHHHhhCCCcEE--EecCC-----Cch----HHHHHHHHcCCeEEEEeCCCCCccCHHHHHHHHH
Q 011842 161 GYITNCGTEGNLHGILVGREVFPDGIL--YASRE-----SHY----SVFKAARMYRMECVKVDCLISGEIDCADFKAKLL 229 (476)
Q Consensus 161 g~~t~ggt~An~~al~aa~~~~p~~~V--l~s~~-----~H~----S~~~~~~~~G~~v~~v~~~~~g~~D~~~Le~~l~ 229 (476)
.+..|||-.+.+...++.++ ++=..+ +.++. .|. -+...++.+|+..+.+++..+..--.++|.+++.
T Consensus 4 v~l~SGGKDS~lAl~~a~~~-~~v~~L~t~~~~~~~s~~~H~~~~~~~~~qA~algipl~~~~~~g~~~~~~~~l~~~l~ 82 (218)
T PF01902_consen 4 VALWSGGKDSCLALYRALRQ-HEVVCLLTMVPEEEDSYMFHGVNIELIEAQAEALGIPLIEIPTSGDEEDYVEDLKEALK 82 (218)
T ss_dssp EEE--SSHHHHHHHHHHHHT--EEEEEEEEEESTTT-SSS-STTGTCHHHHHHHHT--EEEEEE---CCCHHHHHHHHHC
T ss_pred EEEEcCcHHHHHHHHHHHHh-CCccEEEEeccCCCCcccccccCHHHHHHHHHHCCCCEEEEEccCccchhhHHHHHHHH
Confidence 56778999998887666554 221111 12111 222 2467778899998888875322333577888885
Q ss_pred cCCCCcEEEEEeeCCCcccccc---CHHHHHHHHHHhCC
Q 011842 230 QNKDKPAIINVNIGTTVKGAVD---DLDLVIQTLEESGF 265 (476)
Q Consensus 230 ~~~~~p~~vv~t~gtt~tG~id---~l~~I~~ia~~~g~ 265 (476)
+-. .-.++ +|+++ -...+-.+|++.|+
T Consensus 83 ~~~--v~~vv-------~GdI~~~~~r~~~e~vc~~lGl 112 (218)
T PF01902_consen 83 ELK--VEAVV-------FGDIDSEYQRNWVERVCERLGL 112 (218)
T ss_dssp TC----SEEE---------TTS-HHHHHHHHHHHHHCT-
T ss_pred HcC--CCEEE-------ECcCCcHHHHHHHHHHHHHcCC
Confidence 533 11222 36664 24567788999998
No 489
>cd00640 Trp-synth-beta_II Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan synthase beta chain (Trp-synth_B), cystathionine beta-synthase (CBS), O-acetylserine sulfhydrylase (CS), serine dehydratase (Ser-dehyd), threonine dehydratase (Thr-dehyd), diaminopropionate ammonia lyase (DAL), and threonine synthase (Thr-synth). ACCD catalyzes the conversion of 1-aminocyclopropane-1-carboxylate to alpha-ketobutyrate and ammonia. Tryptophan synthase folds into a tetramer, where the beta chain is the catalytic PLP-binding subunit and catalyzes the formation of L-tryptophan from indole and L-serine. CBS is a tetrameric hemeprotein that catalyzes condensation of serine and homocysteine to cystathionine. CS is a homodimer that catalyzes the formation of L-cysteine from O-acetyl-L-serine. Ser-dehy
Probab=20.26 E-value=7.1e+02 Score=23.19 Aligned_cols=53 Identities=15% Similarity=0.018 Sum_probs=33.6
Q ss_pred EEEcC-CchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCC
Q 011842 161 GYITN-CGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCL 214 (476)
Q Consensus 161 g~~t~-ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~ 214 (476)
.+++. +|..+.-+|..+.. ..-+..|+++..........++.+|++++.++.+
T Consensus 52 ~vv~~ssGN~g~alA~~a~~-~g~~~~v~~p~~~~~~~~~~~~~~Ga~v~~~~~~ 105 (244)
T cd00640 52 VIIESTGGNTGIALAAAAAR-LGLKCTIVMPEGASPEKVAQMRALGAEVVLVPGD 105 (244)
T ss_pred EEEEeCCcHHHHHHHHHHHH-cCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCC
Confidence 44544 44454444443333 2345678888777666677888899999888753
No 490
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=20.11 E-value=78 Score=30.46 Aligned_cols=35 Identities=11% Similarity=0.114 Sum_probs=29.8
Q ss_pred EeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcc
Q 011842 240 VNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALF 279 (476)
Q Consensus 240 ~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~ 279 (476)
.....+..|+.++++++++.|+++|+ .|++|-+..
T Consensus 41 ~~~vd~~~Gt~~d~~~Lv~~~h~~gi-----~VilD~V~N 75 (316)
T PF00128_consen 41 YYAVDPRFGTMEDFKELVDAAHKRGI-----KVILDVVPN 75 (316)
T ss_dssp EEEESTTTBHHHHHHHHHHHHHHTTC-----EEEEEEETS
T ss_pred eeccccccchhhhhhhhhhccccccc-----eEEEeeecc
Confidence 33455677999999999999999999 999999864
Done!