Query 011842
Match_columns 476
No_of_seqs 317 out of 2940
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 16:26:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011842.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011842hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4e1o_A HDC, histidine decarbox 100.0 9E-48 3.1E-52 404.2 39.1 383 60-452 33-480 (481)
2 3k40_A Aromatic-L-amino-acid d 100.0 7.6E-48 2.6E-52 404.0 36.5 382 60-452 28-473 (475)
3 3vp6_A Glutamate decarboxylase 100.0 4.9E-45 1.7E-49 386.0 38.4 383 57-450 45-505 (511)
4 1js3_A DDC;, DOPA decarboxylas 100.0 2.6E-44 8.8E-49 378.2 36.3 385 60-454 28-478 (486)
5 2qma_A Diaminobutyrate-pyruvat 100.0 1.3E-41 4.5E-46 358.7 37.2 365 73-449 72-495 (497)
6 2okj_A Glutamate decarboxylase 100.0 3E-41 1E-45 356.5 37.7 380 60-450 45-502 (504)
7 2dgk_A GAD-beta, GADB, glutama 100.0 2.9E-41 9.8E-46 351.8 36.9 372 72-455 16-439 (452)
8 2jis_A Cysteine sulfinic acid 100.0 3.7E-41 1.3E-45 356.8 36.5 377 59-448 63-513 (515)
9 3hbx_A GAD 1, glutamate decarb 100.0 6.5E-39 2.2E-43 338.4 37.9 370 73-458 31-452 (502)
10 3f9t_A TDC, L-tyrosine decarbo 100.0 2.7E-34 9.2E-39 291.6 40.7 361 73-448 4-396 (397)
11 3mc6_A Sphingosine-1-phosphate 100.0 3.7E-35 1.3E-39 309.1 32.0 370 72-454 36-441 (497)
12 3mad_A Sphingosine-1-phosphate 100.0 4.3E-34 1.5E-38 302.4 34.7 371 73-455 70-474 (514)
13 2z67_A O-phosphoseryl-tRNA(SEC 100.0 8.1E-33 2.8E-37 288.4 26.0 351 73-446 57-454 (456)
14 3bc8_A O-phosphoseryl-tRNA(SEC 100.0 1.8E-30 6.1E-35 266.1 24.6 354 73-452 22-445 (450)
15 2dr1_A PH1308 protein, 386AA l 100.0 3.9E-28 1.3E-32 245.8 35.5 300 136-451 50-380 (386)
16 3zrp_A Serine-pyruvate aminotr 100.0 9.4E-29 3.2E-33 250.0 25.9 299 136-451 32-364 (384)
17 3lvm_A Cysteine desulfurase; s 100.0 1.5E-27 5.2E-32 245.0 34.3 298 136-452 65-401 (423)
18 3nnk_A Ureidoglycine-glyoxylat 100.0 5.9E-28 2E-32 246.8 31.0 297 136-450 43-390 (411)
19 3isl_A Purine catabolism prote 100.0 6.5E-28 2.2E-32 246.9 31.0 297 136-450 41-390 (416)
20 2z9v_A Aspartate aminotransfer 100.0 1.3E-27 4.6E-32 242.8 32.5 298 136-450 39-371 (392)
21 4hvk_A Probable cysteine desul 100.0 2.2E-27 7.7E-32 239.3 31.9 293 135-452 39-375 (382)
22 1wyu_B Glycine dehydrogenase s 100.0 2.9E-27 9.9E-32 247.6 33.4 354 73-449 41-440 (474)
23 1eg5_A Aminotransferase; PLP-d 100.0 6.8E-27 2.3E-31 236.3 34.9 294 137-454 42-380 (384)
24 4eb5_A Probable cysteine desul 100.0 3.5E-27 1.2E-31 238.5 32.5 292 136-452 40-375 (382)
25 1vjo_A Alanine--glyoxylate ami 100.0 2.4E-27 8.1E-32 241.2 31.3 293 137-447 65-392 (393)
26 2yrr_A Aminotransferase, class 100.0 1.2E-27 4.2E-32 238.8 28.6 294 136-448 30-351 (353)
27 1iug_A Putative aspartate amin 100.0 2E-27 6.8E-32 237.6 29.4 292 136-450 31-348 (352)
28 1t3i_A Probable cysteine desul 100.0 1.2E-26 3.9E-31 237.7 33.1 298 138-452 71-415 (420)
29 2huf_A Alanine glyoxylate amin 100.0 1.3E-26 4.6E-31 235.5 32.6 297 137-451 50-384 (393)
30 3kgw_A Alanine-glyoxylate amin 100.0 2E-26 6.8E-31 233.6 32.4 296 137-450 54-388 (393)
31 2ch1_A 3-hydroxykynurenine tra 100.0 1.3E-26 4.5E-31 235.7 31.0 302 139-458 51-391 (396)
32 2w8t_A SPT, serine palmitoyltr 100.0 3.2E-26 1.1E-30 236.3 32.1 291 138-454 108-419 (427)
33 1kmj_A Selenocysteine lyase; p 100.0 3.7E-26 1.3E-30 232.7 31.8 296 138-450 66-405 (406)
34 3ffr_A Phosphoserine aminotran 100.0 6.9E-27 2.4E-31 234.4 25.0 288 136-446 40-360 (362)
35 3e9k_A Kynureninase; kynurenin 100.0 1.1E-26 3.8E-31 242.3 27.5 297 139-449 111-460 (465)
36 3f0h_A Aminotransferase; RER07 100.0 3E-26 1E-30 231.5 29.0 296 136-448 49-372 (376)
37 1m32_A 2-aminoethylphosphonate 100.0 2.6E-26 8.9E-31 230.3 28.1 295 139-448 37-363 (366)
38 3cai_A Possible aminotransfera 100.0 2.4E-26 8E-31 234.8 27.9 291 137-446 67-405 (406)
39 3hl2_A O-phosphoseryl-tRNA(SEC 100.0 2.4E-26 8.3E-31 232.6 26.6 362 73-455 40-466 (501)
40 1j32_A Aspartate aminotransfer 99.9 9.4E-26 3.2E-30 229.1 30.9 292 136-450 68-387 (388)
41 3ke3_A Putative serine-pyruvat 99.9 6E-26 2.1E-30 230.6 28.7 295 135-451 31-377 (379)
42 2e7j_A SEP-tRNA:Cys-tRNA synth 99.9 1.4E-26 4.9E-31 233.2 23.8 287 139-449 53-369 (371)
43 1elu_A L-cysteine/L-cystine C- 99.9 6.1E-26 2.1E-30 230.0 28.0 290 139-446 59-388 (390)
44 3a9z_A Selenocysteine lyase; P 99.9 1.1E-25 3.8E-30 232.0 29.4 294 136-451 58-429 (432)
45 3vax_A Putative uncharacterize 99.9 2.6E-26 8.8E-31 233.9 23.9 294 136-448 60-398 (400)
46 1qz9_A Kynureninase; kynurenin 99.9 3.1E-25 1E-29 227.3 31.2 287 139-449 71-401 (416)
47 2zc0_A Alanine glyoxylate tran 99.9 2.4E-25 8.3E-30 227.5 29.9 331 100-451 41-405 (407)
48 2bkw_A Alanine-glyoxylate amin 99.9 9.8E-26 3.4E-30 228.1 25.0 295 139-448 38-382 (385)
49 3qm2_A Phosphoserine aminotran 99.9 8.7E-27 3E-31 237.0 16.6 289 135-449 68-384 (386)
50 3dzz_A Putative pyridoxal 5'-p 99.9 4.5E-25 1.5E-29 223.9 29.0 293 138-449 65-388 (391)
51 3nra_A Aspartate aminotransfer 99.9 1.8E-25 6.3E-30 228.1 26.0 293 136-450 79-405 (407)
52 3g0t_A Putative aminotransfera 99.9 7.2E-25 2.5E-29 226.1 30.5 293 137-448 84-435 (437)
53 3e77_A Phosphoserine aminotran 99.9 6.3E-26 2.2E-30 229.5 21.6 296 131-449 50-374 (377)
54 3a2b_A Serine palmitoyltransfe 99.9 1E-24 3.4E-29 222.4 30.6 284 138-449 87-391 (398)
55 1gd9_A Aspartate aminotransfer 99.9 6.5E-25 2.2E-29 223.0 28.8 292 136-449 64-385 (389)
56 1o4s_A Aspartate aminotransfer 99.9 4.5E-25 1.5E-29 224.7 27.2 289 136-448 79-387 (389)
57 2gb3_A Aspartate aminotransfer 99.9 3.3E-25 1.1E-29 227.2 26.1 291 136-451 80-403 (409)
58 1wyu_A Glycine dehydrogenase ( 99.9 1.2E-24 4.2E-29 225.2 30.3 344 73-446 40-436 (438)
59 1b5p_A Protein (aspartate amin 99.9 5.6E-25 1.9E-29 223.7 26.8 289 136-447 69-382 (385)
60 3aow_A Putative uncharacterize 99.9 1.5E-24 5.3E-29 225.3 30.6 333 99-452 82-447 (448)
61 3cq5_A Histidinol-phosphate am 99.9 9.4E-24 3.2E-28 213.3 35.5 282 138-447 72-365 (369)
62 2z61_A Probable aspartate amin 99.9 1.6E-24 5.4E-29 218.8 29.0 282 136-447 67-368 (370)
63 1vp4_A Aminotransferase, putat 99.9 4.7E-25 1.6E-29 227.2 25.4 299 136-453 86-421 (425)
64 1svv_A Threonine aldolase; str 99.9 8.3E-25 2.8E-29 218.9 25.8 293 137-449 47-357 (359)
65 3m5u_A Phosphoserine aminotran 99.9 3.5E-25 1.2E-29 223.2 22.5 316 103-449 11-359 (361)
66 3tqx_A 2-amino-3-ketobutyrate 99.9 4.3E-25 1.5E-29 224.6 23.3 287 139-450 88-396 (399)
67 1u08_A Hypothetical aminotrans 99.9 1.9E-24 6.5E-29 219.5 27.5 290 136-445 68-385 (386)
68 1xi9_A Putative transaminase; 99.9 1.3E-24 4.3E-29 222.5 25.9 293 136-450 79-403 (406)
69 3h14_A Aminotransferase, class 99.9 4.4E-24 1.5E-28 217.1 29.3 288 136-450 69-382 (391)
70 1yiz_A Kynurenine aminotransfe 99.9 5.6E-24 1.9E-28 219.2 30.5 293 136-447 78-426 (429)
71 2o0r_A RV0858C (N-succinyldiam 99.9 1.6E-24 5.3E-29 222.2 25.8 294 136-449 63-395 (411)
72 2c0r_A PSAT, phosphoserine ami 99.9 1.9E-24 6.6E-29 217.5 25.2 286 136-449 46-360 (362)
73 2x5d_A Probable aminotransfera 99.9 5.9E-24 2E-28 218.0 29.1 293 136-450 76-398 (412)
74 3fdb_A Beta C-S lyase, putativ 99.9 1.2E-23 4.2E-28 212.4 30.6 286 138-448 61-374 (377)
75 3kki_A CAI-1 autoinducer synth 99.9 2.8E-24 9.7E-29 220.1 26.1 281 139-449 104-403 (409)
76 3ele_A Amino transferase; RER0 99.9 6.8E-24 2.3E-28 216.1 28.7 294 136-450 77-396 (398)
77 3euc_A Histidinol-phosphate am 99.9 5.7E-24 1.9E-28 214.3 27.8 275 143-447 71-365 (367)
78 3fvs_A Kynurenine--oxoglutarat 99.9 1.5E-24 5E-29 222.8 23.8 291 136-448 68-420 (422)
79 1v2d_A Glutamine aminotransfer 99.9 1.8E-24 6.3E-29 219.2 24.0 289 137-451 63-372 (381)
80 1v72_A Aldolase; PLP-dependent 99.9 7.2E-25 2.5E-29 219.3 20.6 288 139-449 43-352 (356)
81 3b46_A Aminotransferase BNA3; 99.9 1E-24 3.5E-29 226.4 22.2 291 136-446 96-443 (447)
82 3ly1_A Putative histidinol-pho 99.9 1E-23 3.4E-28 211.3 27.7 280 142-448 54-350 (354)
83 3get_A Histidinol-phosphate am 99.9 1E-23 3.5E-28 212.3 26.9 276 143-447 69-364 (365)
84 2zyj_A Alpha-aminodipate amino 99.9 4.7E-24 1.6E-28 217.5 24.5 287 137-451 76-394 (397)
85 3dyd_A Tyrosine aminotransfera 99.9 1.4E-23 4.6E-28 216.6 28.0 294 137-451 98-425 (427)
86 3ezs_A Aminotransferase ASPB; 99.9 6E-24 2E-28 214.7 24.9 284 137-448 61-373 (376)
87 1fc4_A 2-amino-3-ketobutyrate 99.9 3E-24 1E-28 219.0 22.8 286 139-450 90-397 (401)
88 3e2y_A Kynurenine-oxoglutarate 99.9 7.5E-24 2.6E-28 216.5 25.8 290 137-445 63-408 (410)
89 4dq6_A Putative pyridoxal phos 99.9 2.2E-23 7.4E-28 211.4 28.9 290 137-447 69-390 (391)
90 3kax_A Aminotransferase, class 99.9 2.8E-23 9.6E-28 210.0 29.5 288 138-447 62-382 (383)
91 3l8a_A METC, putative aminotra 99.9 1.1E-23 3.9E-28 216.7 26.4 292 138-448 99-420 (421)
92 3ffh_A Histidinol-phosphate am 99.9 3.2E-23 1.1E-27 208.5 29.2 275 142-446 70-362 (363)
93 2o1b_A Aminotransferase, class 99.9 8.5E-24 2.9E-28 216.5 24.3 289 137-448 87-401 (404)
94 1bs0_A Protein (8-amino-7-oxon 99.9 1.7E-23 5.7E-28 212.2 25.3 281 139-446 84-383 (384)
95 2dou_A Probable N-succinyldiam 99.9 1.6E-23 5.3E-28 211.9 24.6 286 136-446 64-374 (376)
96 2r2n_A Kynurenine/alpha-aminoa 99.9 1.2E-22 4.2E-27 209.2 31.8 296 136-450 79-424 (425)
97 3jtx_A Aminotransferase; NP_28 99.9 6.3E-23 2.1E-27 208.7 28.0 287 137-446 68-394 (396)
98 1iay_A ACC synthase 2, 1-amino 99.9 5.1E-23 1.7E-27 212.0 27.5 292 137-448 85-425 (428)
99 1rv3_A Serine hydroxymethyltra 99.9 1.4E-23 4.9E-28 220.1 23.0 297 136-449 87-430 (483)
100 3rq1_A Aminotransferase class 99.9 3.2E-23 1.1E-27 212.8 23.9 298 136-450 81-415 (418)
101 2rfv_A Methionine gamma-lyase; 99.9 2.1E-22 7.2E-27 205.7 29.5 272 138-446 63-396 (398)
102 1c7n_A Cystalysin; transferase 99.9 1.3E-22 4.5E-27 206.6 27.9 295 137-451 68-394 (399)
103 2fnu_A Aminotransferase; prote 99.9 6.3E-23 2.2E-27 206.8 25.2 288 141-450 34-372 (375)
104 2c81_A Glutamine-2-deoxy-scyll 99.9 5.3E-23 1.8E-27 211.3 24.9 289 138-449 41-413 (418)
105 1bw0_A TAT, protein (tyrosine 99.9 1.6E-22 5.4E-27 207.3 28.3 297 137-450 77-413 (416)
106 3tcm_A Alanine aminotransferas 99.9 1.9E-22 6.6E-27 212.4 29.3 325 109-453 108-497 (500)
107 2bwn_A 5-aminolevulinate synth 99.9 1.8E-22 6.2E-27 205.9 27.9 288 139-449 91-399 (401)
108 1d2f_A MALY protein; aminotran 99.9 3.3E-22 1.1E-26 203.1 29.4 292 138-450 66-389 (390)
109 3uwc_A Nucleotide-sugar aminot 99.9 5.4E-23 1.8E-27 207.6 22.3 285 141-449 40-370 (374)
110 3piu_A 1-aminocyclopropane-1-c 99.9 1E-22 3.4E-27 210.4 24.8 295 136-450 87-432 (435)
111 1o69_A Aminotransferase; struc 99.9 6.5E-22 2.2E-26 201.8 30.2 226 142-387 35-266 (394)
112 2x3l_A ORN/Lys/Arg decarboxyla 99.9 6.7E-24 2.3E-28 220.4 15.5 280 139-450 57-353 (446)
113 3op7_A Aminotransferase class 99.9 1.2E-22 4.1E-27 205.2 24.3 285 136-450 64-371 (375)
114 1fg7_A Histidinol phosphate am 99.9 2.7E-22 9.3E-27 201.8 26.8 271 144-446 63-354 (356)
115 1w23_A Phosphoserine aminotran 99.9 3.9E-23 1.3E-27 207.4 20.1 288 136-448 45-358 (360)
116 2x5f_A Aspartate_tyrosine_phen 99.9 1E-22 3.5E-27 209.9 23.7 299 136-450 89-429 (430)
117 1c4k_A Protein (ornithine deca 99.9 7.3E-23 2.5E-27 223.2 23.6 298 140-451 174-567 (730)
118 2vyc_A Biodegradative arginine 99.9 1.1E-22 3.8E-27 223.3 24.8 295 139-451 205-606 (755)
119 3p1t_A Putative histidinol-pho 99.9 6.6E-22 2.3E-26 196.5 28.1 268 143-447 55-334 (337)
120 3hdo_A Histidinol-phosphate am 99.9 4.1E-22 1.4E-26 200.4 26.9 270 143-449 69-354 (360)
121 2a7v_A Serine hydroxymethyltra 99.9 2.8E-22 9.5E-27 209.6 26.5 290 138-449 99-440 (490)
122 3ftb_A Histidinol-phosphate am 99.9 1.1E-21 3.8E-26 196.8 29.7 272 143-448 65-359 (361)
123 1e5e_A MGL, methionine gamma-l 99.9 4.3E-22 1.5E-26 204.1 27.2 272 139-451 62-396 (404)
124 1b9h_A AHBA synthase, protein 99.9 1E-21 3.5E-26 199.4 28.9 284 143-449 42-387 (388)
125 2vi8_A Serine hydroxymethyltra 99.9 7E-22 2.4E-26 201.4 27.2 288 136-449 66-386 (405)
126 3frk_A QDTB; aminotransferase, 99.9 5E-23 1.7E-27 208.1 18.5 282 141-447 38-365 (373)
127 3qgu_A LL-diaminopimelate amin 99.9 1.1E-21 3.6E-26 203.4 28.9 286 136-449 112-439 (449)
128 1gc0_A Methionine gamma-lyase; 99.9 5.1E-22 1.8E-26 203.0 25.7 271 139-446 65-397 (398)
129 3dr4_A Putative perosamine syn 99.9 4E-22 1.4E-26 202.8 24.5 283 141-446 58-389 (391)
130 1qgn_A Protein (cystathionine 99.9 8.1E-22 2.8E-26 204.2 26.9 270 139-449 114-444 (445)
131 3ppl_A Aspartate aminotransfer 99.9 3.9E-22 1.3E-26 205.5 24.3 291 136-451 79-421 (427)
132 1mdo_A ARNB aminotransferase; 99.9 4.7E-22 1.6E-26 202.0 24.3 284 142-451 42-387 (393)
133 1jg8_A L-ALLO-threonine aldola 99.9 1.3E-22 4.5E-27 202.6 19.8 283 142-449 41-345 (347)
134 3ihj_A Alanine aminotransferas 99.9 1.8E-21 6.3E-26 204.8 29.4 299 135-453 129-496 (498)
135 3t18_A Aminotransferase class 99.9 2.9E-22 9.7E-27 205.4 22.5 295 136-450 80-410 (413)
136 2po3_A 4-dehydrase; external a 99.9 4.6E-21 1.6E-25 197.3 31.2 280 144-450 57-386 (424)
137 2cb1_A O-acetyl homoserine sul 99.9 7.4E-22 2.5E-26 202.7 24.9 277 139-445 56-411 (412)
138 1lc5_A COBD, L-threonine-O-3-p 99.9 3.3E-21 1.1E-25 194.0 28.9 277 138-450 62-360 (364)
139 2dkj_A Serine hydroxymethyltra 99.9 7E-22 2.4E-26 201.5 24.1 286 139-449 69-387 (407)
140 3if2_A Aminotransferase; YP_26 99.9 1.7E-21 5.8E-26 201.5 26.1 297 136-452 84-442 (444)
141 3ruy_A Ornithine aminotransfer 99.9 3.8E-21 1.3E-25 195.4 27.2 278 139-447 78-391 (392)
142 3qhx_A Cystathionine gamma-syn 99.9 5.2E-21 1.8E-25 195.3 27.8 268 138-443 65-391 (392)
143 4f4e_A Aromatic-amino-acid ami 99.9 1.8E-22 6.1E-27 207.6 16.5 298 136-447 93-419 (420)
144 1vef_A Acetylornithine/acetyl- 99.9 2.3E-21 7.8E-26 197.3 23.9 280 139-447 87-394 (395)
145 2oga_A Transaminase; PLP-depen 99.9 7.4E-21 2.5E-25 194.2 27.2 285 142-449 66-395 (399)
146 2fyf_A PSAT, phosphoserine ami 99.9 1.4E-21 4.8E-26 199.4 21.8 285 136-448 75-396 (398)
147 3g7q_A Valine-pyruvate aminotr 99.9 1.6E-21 5.6E-26 199.6 21.7 293 136-453 76-416 (417)
148 7aat_A Aspartate aminotransfer 99.9 5.6E-22 1.9E-26 202.2 17.6 295 136-447 72-400 (401)
149 3n0l_A Serine hydroxymethyltra 99.9 3.5E-20 1.2E-24 189.5 30.4 289 136-449 68-388 (417)
150 3ju7_A Putative PLP-dependent 99.9 1.4E-20 4.7E-25 191.2 27.1 283 144-449 41-374 (377)
151 1cs1_A CGS, protein (cystathio 99.9 3E-20 1E-24 188.9 29.5 270 139-446 52-383 (386)
152 2fq6_A Cystathionine beta-lyas 99.9 3.2E-21 1.1E-25 198.2 22.3 269 139-445 82-413 (415)
153 1pff_A Methionine gamma-lyase; 99.9 5.3E-21 1.8E-25 189.9 23.0 266 143-446 2-330 (331)
154 3ei9_A LL-diaminopimelate amin 99.9 5.3E-21 1.8E-25 197.1 23.8 284 136-448 99-426 (432)
155 3fsl_A Aromatic-amino-acid ami 99.9 1E-21 3.5E-26 199.8 17.2 294 136-446 71-396 (397)
156 2eh6_A Acoat, acetylornithine 99.9 1.6E-20 5.5E-25 189.4 25.7 272 142-446 73-374 (375)
157 3ez1_A Aminotransferase MOCR f 99.9 1.9E-20 6.7E-25 192.3 26.7 292 136-451 71-416 (423)
158 3ecd_A Serine hydroxymethyltra 99.9 5.4E-20 1.8E-24 188.5 29.6 287 139-450 78-397 (425)
159 1yaa_A Aspartate aminotransfer 99.9 1.3E-21 4.6E-26 200.3 17.5 294 136-449 74-410 (412)
160 3b8x_A WBDK, pyridoxamine 5-ph 99.9 4.6E-20 1.6E-24 187.5 28.8 282 141-443 36-389 (390)
161 3meb_A Aspartate aminotransfer 99.9 1.2E-20 4.2E-25 195.8 24.7 295 136-449 95-443 (448)
162 1ajs_A Aspartate aminotransfer 99.9 3.3E-21 1.1E-25 197.3 19.4 299 136-449 75-410 (412)
163 3fkd_A L-threonine-O-3-phospha 99.9 3.2E-20 1.1E-24 185.7 26.1 267 143-448 54-340 (350)
164 3acz_A Methionine gamma-lyase; 99.9 4.1E-20 1.4E-24 188.4 27.3 213 139-389 59-278 (389)
165 2q7w_A Aspartate aminotransfer 99.9 1.9E-21 6.6E-26 197.7 17.2 291 136-446 70-395 (396)
166 4adb_A Succinylornithine trans 99.9 3.1E-20 1.1E-24 189.3 25.8 283 139-453 81-403 (406)
167 3nyt_A Aminotransferase WBPE; 99.9 7E-21 2.4E-25 192.1 20.6 282 142-446 38-360 (367)
168 3d6k_A Putative aminotransfera 99.9 5.7E-20 1.9E-24 189.1 27.0 290 136-452 77-420 (422)
169 2ez2_A Beta-tyrosinase, tyrosi 99.9 3.9E-20 1.3E-24 192.0 25.7 288 143-450 79-431 (456)
170 2ord_A Acoat, acetylornithine 99.9 2.2E-20 7.7E-25 190.2 23.1 278 139-448 82-395 (397)
171 3gbx_A Serine hydroxymethyltra 99.9 3.5E-20 1.2E-24 189.6 24.5 287 138-449 75-395 (420)
172 2ay1_A Aroat, aromatic amino a 99.9 4.9E-21 1.7E-25 194.7 17.9 291 136-446 70-392 (394)
173 3ndn_A O-succinylhomoserine su 99.9 1.7E-19 5.7E-24 185.4 29.4 214 139-390 81-301 (414)
174 3nx3_A Acoat, acetylornithine 99.9 8.4E-20 2.9E-24 185.8 26.6 279 139-448 78-393 (395)
175 1s0a_A Adenosylmethionine-8-am 99.9 1.2E-19 4.2E-24 186.9 27.9 292 139-448 86-422 (429)
176 3f6t_A Aspartate aminotransfer 99.9 2.8E-20 9.6E-25 197.4 23.6 303 136-455 139-530 (533)
177 3lws_A Aromatic amino acid bet 99.9 1.8E-20 6.1E-25 187.9 19.5 275 142-446 50-355 (357)
178 3n75_A LDC, lysine decarboxyla 99.9 2.3E-19 8E-24 194.2 29.5 294 139-452 195-562 (715)
179 1n8p_A Cystathionine gamma-lya 99.9 2.5E-20 8.5E-25 190.3 20.5 269 139-447 55-392 (393)
180 3i4j_A Aminotransferase, class 99.8 3.2E-19 1.1E-23 183.8 28.4 294 139-450 72-428 (430)
181 1ax4_A Tryptophanase; tryptoph 99.8 1.2E-19 4E-24 188.9 25.3 292 143-450 80-441 (467)
182 3h7f_A Serine hydroxymethyltra 99.8 5.8E-20 2E-24 190.7 22.7 285 139-449 91-413 (447)
183 1sff_A 4-aminobutyrate aminotr 99.8 5.1E-19 1.7E-23 181.6 29.2 290 139-450 84-424 (426)
184 3cog_A Cystathionine gamma-lya 99.8 5.3E-20 1.8E-24 188.5 21.8 267 141-446 69-398 (403)
185 3jzl_A Putative cystathionine 99.8 2.9E-20 9.9E-25 190.5 19.5 235 141-406 61-324 (409)
186 3asa_A LL-diaminopimelate amin 99.8 2.8E-19 9.7E-24 182.4 26.6 287 136-451 76-394 (400)
187 3i16_A Aluminum resistance pro 99.8 4.9E-20 1.7E-24 189.6 20.8 237 141-406 75-341 (427)
188 2pb2_A Acetylornithine/succiny 99.8 2.5E-19 8.6E-24 184.3 25.8 281 139-450 99-418 (420)
189 3dxv_A Alpha-amino-epsilon-cap 99.8 4.9E-19 1.7E-23 182.9 27.3 293 138-451 85-426 (439)
190 1uu1_A Histidinol-phosphate am 99.8 1.9E-19 6.5E-24 179.2 22.1 262 138-446 59-334 (335)
191 1ibj_A CBL, cystathionine beta 99.8 1.5E-19 5.2E-24 188.3 22.2 267 139-448 133-460 (464)
192 2oqx_A Tryptophanase; lyase, p 99.8 1.3E-19 4.3E-24 188.6 20.9 289 143-450 78-442 (467)
193 3n5m_A Adenosylmethionine-8-am 99.8 2.1E-18 7.1E-23 179.0 30.0 291 138-448 90-450 (452)
194 2ctz_A O-acetyl-L-homoserine s 99.8 5.4E-19 1.9E-23 182.0 25.3 223 139-391 58-312 (421)
195 1z7d_A Ornithine aminotransfer 99.8 2E-18 7E-23 178.3 29.6 282 139-450 107-429 (433)
196 3pj0_A LMO0305 protein; struct 99.8 3.5E-19 1.2E-23 178.5 22.3 279 139-446 48-358 (359)
197 3dod_A Adenosylmethionine-8-am 99.8 9.7E-18 3.3E-22 173.9 33.8 295 139-451 87-444 (448)
198 2aeu_A Hypothetical protein MJ 99.8 2.3E-19 7.9E-24 181.9 20.9 283 138-452 57-373 (374)
199 3b1d_A Betac-S lyase; HET: PLP 99.7 3.4E-22 1.2E-26 203.4 0.0 291 137-448 68-391 (392)
200 3hvy_A Cystathionine beta-lyas 99.8 4.7E-19 1.6E-23 182.2 22.8 236 141-406 76-341 (427)
201 2oat_A Ornithine aminotransfer 99.8 1.1E-18 3.6E-23 180.8 25.4 280 139-448 118-437 (439)
202 3ri6_A O-acetylhomoserine sulf 99.8 8E-19 2.7E-23 181.0 24.1 237 139-406 82-356 (430)
203 3tfu_A Adenosylmethionine-8-am 99.8 1E-18 3.5E-23 181.9 24.9 294 139-450 118-453 (457)
204 1zod_A DGD, 2,2-dialkylglycine 99.8 1.4E-18 4.7E-23 179.1 25.6 290 139-450 85-432 (433)
205 4eu1_A Mitochondrial aspartate 99.8 4.7E-19 1.6E-23 181.2 21.8 290 136-447 80-408 (409)
206 3l44_A Glutamate-1-semialdehyd 99.8 1E-18 3.6E-23 180.1 23.9 287 139-452 95-432 (434)
207 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.8 2.8E-18 9.7E-23 177.3 27.1 283 141-447 64-433 (437)
208 3fq8_A Glutamate-1-semialdehyd 99.8 2.1E-18 7.3E-23 177.5 26.0 285 139-449 92-426 (427)
209 2eo5_A 419AA long hypothetical 99.8 8.6E-18 3E-22 172.7 30.2 284 139-449 86-417 (419)
210 2cy8_A D-phgat, D-phenylglycin 99.8 4.6E-18 1.6E-22 176.5 27.9 291 138-455 96-440 (453)
211 3a8u_X Omega-amino acid--pyruv 99.8 4.7E-18 1.6E-22 176.1 28.0 296 139-449 93-446 (449)
212 3nmy_A Xometc, cystathionine g 99.8 2E-18 6.9E-23 176.5 24.2 213 139-390 67-288 (400)
213 3k7y_A Aspartate aminotransfer 99.8 1.8E-18 6.1E-23 177.2 22.8 297 136-449 73-404 (405)
214 4e77_A Glutamate-1-semialdehyd 99.8 3.6E-18 1.2E-22 175.9 24.6 280 139-448 93-427 (429)
215 3ht4_A Aluminum resistance pro 99.8 7.3E-19 2.5E-23 181.4 19.4 239 139-406 65-330 (431)
216 3i5t_A Aminotransferase; pyrid 99.8 9.8E-18 3.3E-22 175.4 28.1 297 138-452 96-456 (476)
217 3k28_A Glutamate-1-semialdehyd 99.8 2.4E-18 8.3E-23 177.3 22.5 283 139-449 93-426 (429)
218 3gju_A Putative aminotransfera 99.8 1.1E-17 3.7E-22 174.2 27.4 295 139-451 95-457 (460)
219 2cjg_A L-lysine-epsilon aminot 99.8 5.6E-18 1.9E-22 175.8 25.0 290 139-450 101-448 (449)
220 3hmu_A Aminotransferase, class 99.8 7.5E-18 2.6E-22 176.0 25.9 293 139-451 99-453 (472)
221 2epj_A Glutamate-1-semialdehyd 99.8 3.5E-18 1.2E-22 176.3 22.5 283 139-450 96-431 (434)
222 4a6r_A Omega transaminase; tra 99.8 1.3E-17 4.4E-22 173.5 26.2 295 138-451 93-450 (459)
223 3oks_A 4-aminobutyrate transam 99.8 3.9E-17 1.3E-21 169.5 28.5 291 138-448 103-449 (451)
224 4ffc_A 4-aminobutyrate aminotr 99.8 2.1E-17 7E-22 171.8 24.6 292 138-451 106-450 (453)
225 2zy4_A L-aspartate beta-decarb 99.8 2.5E-17 8.4E-22 175.0 22.0 303 137-455 140-527 (546)
226 3bwn_A AT1G70560, L-tryptophan 99.8 6.5E-18 2.2E-22 172.2 16.8 269 138-448 71-385 (391)
227 2e7u_A Glutamate-1-semialdehyd 99.8 3.6E-17 1.2E-21 168.2 21.7 280 139-446 92-423 (424)
228 4h51_A Aspartate aminotransfer 99.7 3.6E-16 1.2E-20 160.4 18.5 302 136-452 88-419 (420)
229 3ou5_A Serine hydroxymethyltra 99.7 2.4E-15 8.2E-20 151.8 23.7 296 137-448 98-439 (490)
230 2hox_A ALLIIN lyase 1; cystein 99.7 4.9E-16 1.7E-20 160.2 17.4 270 137-447 102-422 (427)
231 1ohv_A 4-aminobutyrate aminotr 99.7 2.3E-15 7.8E-20 157.2 19.4 283 138-449 109-470 (472)
232 4ao9_A Beta-phenylalanine amin 99.7 1E-14 3.6E-19 150.5 23.4 284 139-450 127-446 (454)
233 2yky_A Beta-transaminase; tran 99.4 3E-17 1E-21 170.5 0.0 282 138-450 139-460 (465)
234 4atq_A 4-aminobutyrate transam 99.4 2.1E-10 7.3E-15 118.6 30.8 288 139-449 107-454 (456)
235 4e3q_A Pyruvate transaminase; 99.4 1.5E-10 5.2E-15 120.2 26.1 297 139-452 111-470 (473)
236 4a0g_A Adenosylmethionine-8-am 99.3 1.6E-11 5.4E-16 135.9 17.6 297 139-449 424-827 (831)
237 4g81_D Putative hexonate dehyd 58.6 39 0.0013 31.1 8.9 97 151-251 4-103 (255)
238 4fgs_A Probable dehydrogenase 50.2 33 0.0011 32.0 7.0 88 161-252 31-121 (273)
239 3ghf_A Septum site-determining 45.3 80 0.0027 25.4 7.6 42 220-265 26-75 (120)
240 2pju_A Propionate catabolism o 41.5 1.2E+02 0.0042 27.2 9.1 76 171-265 95-173 (225)
241 1j0a_A 1-aminocyclopropane-1-c 39.5 79 0.0027 29.9 8.0 54 161-214 72-128 (325)
242 2q5c_A NTRC family transcripti 39.5 95 0.0033 27.1 7.9 49 166-214 78-126 (196)
243 3grp_A 3-oxoacyl-(acyl carrier 35.5 1.1E+02 0.0037 27.9 8.0 86 161-250 29-117 (266)
244 2ab1_A Hypothetical protein; H 35.2 66 0.0023 26.0 5.6 44 217-265 47-90 (122)
245 2qv5_A AGR_C_5032P, uncharacte 35.0 1.1E+02 0.0036 28.4 7.6 79 187-265 60-156 (261)
246 1v8a_A Hydroxyethylthiazole ki 30.4 1.7E+02 0.0058 26.8 8.4 65 198-278 31-95 (265)
247 3ecs_A Translation initiation 30.0 3.6E+02 0.012 25.5 10.9 95 160-265 123-224 (315)
248 2nly_A BH1492 protein, diverge 28.6 92 0.0031 28.5 6.0 48 218-265 79-129 (245)
249 3rwb_A TPLDH, pyridoxal 4-dehy 26.7 1.3E+02 0.0046 26.8 6.9 83 162-250 9-96 (247)
250 4eso_A Putative oxidoreductase 26.5 1.1E+02 0.0039 27.5 6.4 85 161-250 11-98 (255)
251 3guy_A Short-chain dehydrogena 26.3 2E+02 0.0069 25.0 8.0 61 186-250 28-88 (230)
252 4dqx_A Probable oxidoreductase 26.2 1.6E+02 0.0056 26.8 7.6 86 161-250 29-117 (277)
253 4gqr_A Pancreatic alpha-amylas 26.1 34 0.0012 34.2 3.0 33 243-280 69-101 (496)
254 1tks_A 3,4-dihydroxy-2-butanon 26.1 78 0.0027 28.1 4.8 34 232-265 157-190 (204)
255 1tzj_A ACC deaminase, 1-aminoc 26.0 1.5E+02 0.0051 28.0 7.4 53 161-214 69-132 (338)
256 3ezx_A MMCP 1, monomethylamine 25.6 1.6E+02 0.0055 26.1 7.0 73 198-277 113-185 (215)
257 3tfo_A Putative 3-oxoacyl-(acy 24.8 2.2E+02 0.0074 25.8 8.1 86 161-250 6-97 (264)
258 4dyv_A Short-chain dehydrogena 24.7 2.2E+02 0.0076 25.8 8.2 81 161-245 30-113 (272)
259 3gvc_A Oxidoreductase, probabl 24.6 2E+02 0.0068 26.2 7.8 86 161-250 31-119 (277)
260 3lyl_A 3-oxoacyl-(acyl-carrier 24.0 3.4E+02 0.011 23.7 9.1 83 162-250 8-98 (247)
261 3a11_A Translation initiation 23.7 3.8E+02 0.013 25.5 9.7 99 160-275 143-249 (338)
262 3rjz_A N-type ATP pyrophosphat 23.6 4.1E+02 0.014 23.9 11.3 94 161-265 8-117 (237)
263 3mos_A Transketolase, TK; thia 23.3 6.4E+02 0.022 26.1 12.9 67 170-241 160-239 (616)
264 3h7a_A Short chain dehydrogena 23.2 2.7E+02 0.0093 24.7 8.4 83 162-250 10-99 (252)
265 1f2d_A 1-aminocyclopropane-1-c 22.7 1.5E+02 0.0051 28.1 6.7 53 161-214 69-135 (341)
266 1pq4_A Periplasmic binding pro 22.6 2.1E+02 0.0072 26.6 7.5 70 183-265 189-261 (291)
267 3l6e_A Oxidoreductase, short-c 22.5 1.9E+02 0.0064 25.5 7.0 85 162-250 6-93 (235)
268 3iwp_A Copper homeostasis prot 22.3 4.7E+02 0.016 24.4 9.6 101 199-311 118-245 (287)
269 2rdx_A Mandelate racemase/muco 22.3 3.4E+02 0.012 26.1 9.3 48 219-273 247-294 (379)
270 2o1e_A YCDH; alpha-beta protei 22.2 3.5E+02 0.012 25.3 9.1 74 183-265 189-263 (312)
271 3vc3_A Beta-cyanoalnine syntha 22.1 1.5E+02 0.0051 28.4 6.5 52 161-213 90-141 (344)
272 3n74_A 3-ketoacyl-(acyl-carrie 22.0 4.1E+02 0.014 23.4 9.4 78 161-245 12-94 (261)
273 1uta_A FTSN, MSGA, cell divisi 21.5 1.7E+02 0.006 21.1 5.4 26 420-445 43-68 (81)
274 4e6p_A Probable sorbitol dehyd 21.5 2.6E+02 0.009 24.9 7.9 83 161-250 11-98 (259)
275 3jug_A Beta-mannanase; TIM-bar 20.5 1.1E+02 0.0038 29.4 5.2 24 249-277 85-108 (345)
276 1dec_A Decorsin; blood coagula 20.4 42 0.0014 20.2 1.3 17 456-474 3-19 (39)
No 1
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=100.00 E-value=9e-48 Score=404.16 Aligned_cols=383 Identities=18% Similarity=0.176 Sum_probs=313.2
Q ss_pred ccccccCCCcccc----ccCCCCCcHHHHHHHHHHHHhcccccccCCCCcCCcc------hHHHHHHHHHhhCCCCCCcc
Q 011842 60 SCFSVTEPEADDE----FTGDKEAYMAGVLARYRKTLMERTKHHLGYPYNLDFD------YGALAQLQHFSINNLGDPFI 129 (476)
Q Consensus 60 ~~~~~~~p~~~~~----~~~~~~~~~~~il~~~~~~~~~~~~~~~g~p~~~~~~------~~~l~~~l~~~~n~~g~~~~ 129 (476)
+++...+|+++.. .+|++|.+.+++++++.+.+.++.+ +|.||+++++. ++.+++++...+|+++..|.
T Consensus 33 ~v~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~ 111 (481)
T 4e1o_A 33 RVTPDVQPGYLRAQLPESAPEDPDSWDSIFGDIERIIMPGVV-HWQSPHMHAYYPALTSWPSLLGDMLADAINCLGFTWA 111 (481)
T ss_dssp CSSCCCCTTTTGGGSCSSCCSSCCCHHHHHHHHHHHTGGGCC-CTTSTTBCSSSCCCCCHHHHHHHHHHHHHCCCCSSTT
T ss_pred CCCCCCCHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhcCCC-CCCCCCeeEeCCCCCCHHHHHHHHHHHHhCcccCCcC
Confidence 4566667776664 7899999999999999999988876 67899987764 57889999999999888887
Q ss_pred cCccchhhHHHHHHHHHHHHHHcCCCCCc--------ccEEEcCCchhHHHHHHHHHHhh-----------------CCC
Q 011842 130 ESNYGVHSRQFEVGVLDWFARLWELENNE--------YWGYITNCGTEGNLHGILVGREV-----------------FPD 184 (476)
Q Consensus 130 ~~~~~~~~~~le~~~~~~la~l~g~~~~~--------~~g~~t~ggt~An~~al~aa~~~-----------------~p~ 184 (476)
.++ ..+++|+++.+|+++++|++... .+|++|+|||+||++|++++|++ .|+
T Consensus 112 ~~p---~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~~~~~~~~~~~~~~~~~~~~ 188 (481)
T 4e1o_A 112 SSP---ACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKILEMKTSEPDADESSLNAR 188 (481)
T ss_dssp TCH---HHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHTT
T ss_pred CCc---HHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHHHHHhhhcCcccccccccCC
Confidence 766 78899999999999999998532 36899999999999999999864 157
Q ss_pred cEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccCHHHHHHHHHcC---CCCcEEEEEeeCCCccccccCHHHHHHHHH
Q 011842 185 GILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCADFKAKLLQN---KDKPAIINVNIGTTVKGAVDDLDLVIQTLE 261 (476)
Q Consensus 185 ~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~~~Le~~l~~~---~~~p~~vv~t~gtt~tG~id~l~~I~~ia~ 261 (476)
++||+++.+|+|+.+++++.|++++.||+++++.||+++|+++|+++ ..+|++|++++++|++|.++|+++|+++|+
T Consensus 189 ~~v~~s~~~H~s~~~~~~~~g~~~~~v~~~~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~t~~G~id~l~~I~~la~ 268 (481)
T 4e1o_A 189 LVAYASDQAHSSVEKAGLISLVKMKFLPVDDNFSLRGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAFDCLSELGPICA 268 (481)
T ss_dssp EEEEEETTSCHHHHHHHHHHTCEEEEECCCTTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHH
T ss_pred eEEEEcCcchHHHHHHHHhCCCceEEEEcCCCCcCCHHHHHHHHHHHHhCCCCcEEEEEecCCCCCcCcCCHHHHHHHHH
Confidence 89999999999999999999999999999989999999999999765 234788999999999999999999999999
Q ss_pred HhCCCCCceEEEEecCcccccccccccCCCCCCcccccEEEEcCCCCCCCCCCceeEEeehhh--hhhhcCCccccCCCC
Q 011842 262 ESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEH--INVLSSNVEYLASRD 339 (476)
Q Consensus 262 ~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~--~~~l~~~~~yl~~~~ 339 (476)
+||+ |+|||+||+++.+..........+.+.+|++++++|||+++|.+||+++++++. .+.+.....|+....
T Consensus 269 ~~~~-----~lhvDaA~g~~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~g~g~l~~~~~~~l~~~~~~~~~yl~~~~ 343 (481)
T 4e1o_A 269 REGL-----WLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMVHFDCTGFWVKDKYKLQQTFSVNPIYLRHAN 343 (481)
T ss_dssp HHTC-----EEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSSCEEEEESBHHHHHTTTCCCCGGGCCTT
T ss_pred HcCC-----eEEeehhhHHHHHhChhhHHHhcCcccCCEEEEChHHhcCCCCceEEEEEeCHHHHHHHhcCCchhccCcc
Confidence 9999 999999999875543333323344456899999999999999999999999873 345555667775432
Q ss_pred ---------CcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhc-CCeEeecCCeeEEEEecCCcH-
Q 011842 340 ---------ATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDA-GISAMLNELSSTVVFERPQDE- 408 (476)
Q Consensus 340 ---------~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~-g~~~~~~~~~~iv~f~~~~~~- 408 (476)
.++.++|+ +.++++|++++.+|.+++++++++..+++++|.+.|++. ++.++.++..++++|+.++..
T Consensus 344 ~~~~~~~~~~~~~~~r~-~~~l~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~~~~~~v~f~~~~~~~ 422 (481)
T 4e1o_A 344 SGVATDFMHWQIPLSRR-FRSVKLWFVIRSFGVKNLQAHVRHGTEMAKYFESLVRNDPSFEIPAKRHLGLVVFRLKGPNS 422 (481)
T ss_dssp TTTSCCGGGGSSSSCCC-CTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEECCSCCCSSEEEEEESSCHH
T ss_pred cCCCCCcccccccCCCC-ccHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceeEEEEEeCCchH
Confidence 35667877 468999999999999999999999999999999999998 444444566889999875421
Q ss_pred ---HHhhce------eec----ccCCEEEEEE-cCCCCHHHHHHHHHHHHHHHHHHHh
Q 011842 409 ---EFVRRW------QLA----CQGNIAHVVV-MPNVTIDKLDDFLNELIENRSTWYE 452 (476)
Q Consensus 409 ---~~~~~~------~l~----~~~~~lRv~~-~~~~T~edid~~~~~l~~~~~~~~~ 452 (476)
++.+++ .+. .....+|+++ ++++|++||++++++|+++.+++.+
T Consensus 423 ~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~~di~~~~~~i~~~~~~l~~ 480 (481)
T 4e1o_A 423 LTENVLKEIAKAGRLFLIPATIQDKLIIRFTVTSQFTTRDDILRDWNLIRDAATLILS 480 (481)
T ss_dssp HHHHHHHHHHHHCSSBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCeEEEEeeEECCEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHhh
Confidence 222211 111 1235799985 5778999999999999999887654
No 2
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=100.00 E-value=7.6e-48 Score=403.97 Aligned_cols=382 Identities=18% Similarity=0.191 Sum_probs=302.2
Q ss_pred ccccccCCCcccc----ccCCCCCcHHHHHHHHHHHHhcccccccCCCCcCCcc------hHHHHHHHHHhhCCCCCCcc
Q 011842 60 SCFSVTEPEADDE----FTGDKEAYMAGVLARYRKTLMERTKHHLGYPYNLDFD------YGALAQLQHFSINNLGDPFI 129 (476)
Q Consensus 60 ~~~~~~~p~~~~~----~~~~~~~~~~~il~~~~~~~~~~~~~~~g~p~~~~~~------~~~l~~~l~~~~n~~g~~~~ 129 (476)
+++...+|+++.. ++|++|.+++++++++.+.+.++.+ +|.||+++++. ++.+++++...+|+++..|.
T Consensus 28 ~v~~~~~p~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~ 106 (475)
T 3k40_A 28 RVLPEVKPGYLKPLIPDAAPEKPEKWQDVMQDIERVIMPGVT-HWHSPKFHAYFPTANSYPAIVADMLSGAIACIGFTWI 106 (475)
T ss_dssp CSSCSSCTTCSGGGSCSSCCSSCCCHHHHHHHHHHHTGGGCC-CTTCTTBCCSSCCCCCHHHHHHHHHHHHHCCCSSSCC
T ss_pred CCCCCCCHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhccCC-CCCCcCceeeCCCCCcHHHHHHHHHHHHhCccccCcc
Confidence 3555666766654 7899999999999999999988876 67899988764 57889999999999888887
Q ss_pred cCccchhhHHHHHHHHHHHHHHcCCCCCc-------ccEEEcCCchhHHHHHHHHHHhhC-----------------CCc
Q 011842 130 ESNYGVHSRQFEVGVLDWFARLWELENNE-------YWGYITNCGTEGNLHGILVGREVF-----------------PDG 185 (476)
Q Consensus 130 ~~~~~~~~~~le~~~~~~la~l~g~~~~~-------~~g~~t~ggt~An~~al~aa~~~~-----------------p~~ 185 (476)
.++ ..+++|+++.+|+++++|++.+. .+|+||+|||+||++|++++|++. |++
T Consensus 107 ~~p---~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~ 183 (475)
T 3k40_A 107 ASP---ACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTILGKL 183 (475)
T ss_dssp CCH---HHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHE
T ss_pred CCc---HHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHHHhhccCcccccccccCCe
Confidence 766 68899999999999999998531 369999999999999999997641 346
Q ss_pred EEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccCHHHHHHHHHcC---CCCcEEEEEeeCCCccccccCHHHHHHHHHH
Q 011842 186 ILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCADFKAKLLQN---KDKPAIINVNIGTTVKGAVDDLDLVIQTLEE 262 (476)
Q Consensus 186 ~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~~~Le~~l~~~---~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~ 262 (476)
+||+++.+|+|+.+++++.|++++.||++++| ||+++|+++|+++ ...|++|++++++|++|.++|+++|+++|++
T Consensus 184 ~vi~s~~~H~s~~~~~~~~g~~~~~v~~d~~~-~d~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~~~l~~I~~la~~ 262 (475)
T 3k40_A 184 VGYCSDQAHSSVERAGLLGGVKLRSVQSENHR-MRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDYLDECGPVGNK 262 (475)
T ss_dssp EEEEETTSCHHHHHHHHHHTCEEEEECCBTTB-CCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHH
T ss_pred EEEECCCchHHHHHHHHHcCCceEEEECCCCC-cCHHHHHHHHHHHHHCCCccEEEEEEecCCCCcCcCCHHHHHHHHHH
Confidence 89999999999999999999999999999889 9999999999865 2347889999999999999999999999999
Q ss_pred hCCCCCceEEEEecCcccccccccccCCCCCCcccccEEEEcCCCCCCCCCCceeEEeehhh--hhhhcCCccccCCC--
Q 011842 263 SGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEH--INVLSSNVEYLASR-- 338 (476)
Q Consensus 263 ~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~--~~~l~~~~~yl~~~-- 338 (476)
||+ |+|||+||+++.+........+.+.+.+|++++++|||+++|.+||+++++++. .+.+.....|+...
T Consensus 263 ~~~-----~lhvD~A~~~~~~~~~~~~~~~~gi~~~Ds~~~~~hK~l~~p~g~g~l~~~~~~~l~~~~~~~~~yl~~~~~ 337 (475)
T 3k40_A 263 HNL-----WIHVDAAYAGSAFICPEYRHLMKGIESADSFNFNPHKWMLVNFDCSAMWLKDPSWVVNAFNVDPLYLKHDMQ 337 (475)
T ss_dssp TTC-----EEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSSCEEEEESSGGGC----------------
T ss_pred hCC-----eEEEeHHhHHHHHhCHhhHHHhcCcccCCEEEECchhccCCCCceEEEEEeCHHHHHHHhcCCccccCCCcC
Confidence 999 999999999865533333222444456899999999999999999999999863 24455556676542
Q ss_pred -------CCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhc-CCeEeecCCeeEEEEecCCc---
Q 011842 339 -------DATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDA-GISAMLNELSSTVVFERPQD--- 407 (476)
Q Consensus 339 -------~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~-g~~~~~~~~~~iv~f~~~~~--- 407 (476)
+.++.++|+ +.++++|++++.+|.+|+++++++.+++++++.+.|++. ++.++.++..++++|+.++.
T Consensus 338 ~~~~~~~~~~~~~sr~-~~~l~l~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~l~~~~~~~iv~f~~~~~~~~ 416 (475)
T 3k40_A 338 GSAPDYRHWQIPLGRR-FRALKLWFVLRLYGVENLQAHIRRHCNFAKQFGDLCVADSRFELAAEINMGLVCFRLKGSNER 416 (475)
T ss_dssp -----------CCCGG-GTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEESSCCBTTEEEEEESSCHHH
T ss_pred CCCCCcccccccCCCc-ccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCceEEEEEEeCCchHH
Confidence 245667876 568999999999999999999999999999999999998 44444456678999987542
Q ss_pred -HHHhhce------eec----ccCCEEEEEE-cCCCCHHHHHHHHHHHHHHHHHHHh
Q 011842 408 -EEFVRRW------QLA----CQGNIAHVVV-MPNVTIDKLDDFLNELIENRSTWYE 452 (476)
Q Consensus 408 -~~~~~~~------~l~----~~~~~lRv~~-~~~~T~edid~~~~~l~~~~~~~~~ 452 (476)
.++.+++ .+. .....+|+++ ++++|++||++++++|+++.+++.+
T Consensus 417 ~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~~di~~~~~~i~~~~~~~~~ 473 (475)
T 3k40_A 417 NEALLKRINGRGHIHLVPAKIKDVYFLRMAICSRFTQSEDMEYSWKEVSAAADEMEQ 473 (475)
T ss_dssp HHHHHHHHHHHTSCBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCcEEEEeeEECCEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 2222211 111 2346899985 5788999999999999999887753
No 3
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=100.00 E-value=4.9e-45 Score=385.97 Aligned_cols=383 Identities=21% Similarity=0.284 Sum_probs=309.1
Q ss_pred cccccccccCCCccc-------cccCCCCCcHHHHHHHHHHHHhcccccccCCCCcCCcc------hHHHHHHHHHhhCC
Q 011842 57 VHASCFSVTEPEADD-------EFTGDKEAYMAGVLARYRKTLMERTKHHLGYPYNLDFD------YGALAQLQHFSINN 123 (476)
Q Consensus 57 ~~~~~~~~~~p~~~~-------~~~~~~~~~~~~il~~~~~~~~~~~~~~~g~p~~~~~~------~~~l~~~l~~~~n~ 123 (476)
...+++.+.+|+++. .++|+.|.+.+++++++.+.+.++.+ ++||+++++. ++.+++++...+|.
T Consensus 45 ~~~~~~~~~~p~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~--~~~p~f~~~~~~~~~~~~~~~e~l~~~~~~ 122 (511)
T 3vp6_A 45 RSTKVLDFHHPHQLLEGMEGFNLELSDHPESLEQILVDCRDTLKYGVR--TGHPRFFNQLSTGLDIIGLAGEWLTSTANT 122 (511)
T ss_dssp TTSCSCCCCCHHHHHHCBTTBCCCCCSSCCCHHHHHHHHHHHHHTSCC--TTSTTEESSSSCCCCHHHHHHHHHHHHHCC
T ss_pred CCCCCCCCCCHHHHHHHHhhCCCCCCCCCCCHHHHHHHHHHHhhccCC--CCCCCceEeecCCCcHHHHHHHHHHHHhcc
Confidence 334567777777753 36899999999999999998877654 5889988764 56788999999998
Q ss_pred CCCCcccCccchhhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhC------------CCcEEEecC
Q 011842 124 LGDPFIESNYGVHSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVF------------PDGILYASR 191 (476)
Q Consensus 124 ~g~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~------------p~~~Vl~s~ 191 (476)
....|..++ ..+++|+++++|+++++|++.+..++++|+|||+||+.++.++++.. |+++|++++
T Consensus 123 ~~~~~~~~p---~~~~le~~~~~~l~~~~g~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~~~~~~~~v~~s~ 199 (511)
T 3vp6_A 123 NMFTYEIAP---VFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSE 199 (511)
T ss_dssp CSSCTTTCH---HHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTHHHHHCGGGSCCEEEEEET
T ss_pred CCCCcccCc---hHHHHHHHHHHHHHHHhCCCCCCCceEECCchHHHHHHHHHHHHHHhhhhhhhcCcccCCCeEEEECC
Confidence 777776655 68899999999999999998545679999999999999999988742 678999999
Q ss_pred CCchHHHHHHHHcCC---eEEEEeCCCCCccCHHHHHHHHHcC---CCCcEEEEEeeCCCccccccCHHHHHHHHHHhCC
Q 011842 192 ESHYSVFKAARMYRM---ECVKVDCLISGEIDCADFKAKLLQN---KDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGF 265 (476)
Q Consensus 192 ~~H~S~~~~~~~~G~---~v~~v~~~~~g~~D~~~Le~~l~~~---~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~ 265 (476)
.+|+|+.++++++|+ +++.||+++++.||+++|+++|.++ +.+|.+|++++++|++|.++|+++|+++|++||+
T Consensus 200 ~~H~s~~~~~~~~g~g~~~~~~v~~d~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~l~~I~~ia~~~~~ 279 (511)
T 3vp6_A 200 QSHYSIKKAGAALGFGTDNVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNL 279 (511)
T ss_dssp TSCTHHHHHHHHTTSCGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCCHHHHHHHHHHHTC
T ss_pred CchHHHHHHHHHcCCCCCcEEEeecCCCCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCcccccHHHHHHHHHHcCC
Confidence 999999999999998 8999999989999999999999764 3347899999999999999999999999999999
Q ss_pred CCCceEEEEecCcccccccccccCCCCCCcccccEEEEcCCCCCCCCCCceeEEeehh-hh-hhhcCCccccCCCC----
Q 011842 266 TQDRFYIHCDGALFGLMMPFVKKAPKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRME-HI-NVLSSNVEYLASRD---- 339 (476)
Q Consensus 266 ~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~-~~-~~l~~~~~yl~~~~---- 339 (476)
|+|||+||+++.+........+.+.+.+|++++++|||+++|.+||+++++++ ++ ..+.....|+....
T Consensus 280 -----~lhvD~a~~~~~~~~~~~~~~~~g~~~aDsv~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~ 354 (511)
T 3vp6_A 280 -----WLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILVKEKGILQGCNQMHASYLFQQDKHYD 354 (511)
T ss_dssp -----EEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESSTTHHHHHHCCCCTTTCCSSCSSC
T ss_pred -----EEEEEccchhhHhhChhhhhhccCCccCCEEEECcccccCCCcCeEEEEEeCHHHHHHHhccCCccccCcccccc
Confidence 99999999988775444433345556699999999999999999999999986 33 33455667775432
Q ss_pred -------CcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhc-CCeEee--cCCeeEEEEecCCcH-
Q 011842 340 -------ATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDA-GISAML--NELSSTVVFERPQDE- 408 (476)
Q Consensus 340 -------~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~-g~~~~~--~~~~~iv~f~~~~~~- 408 (476)
.++.++|+. .++++|++++.+|.+++++++++..+++++|.+.|++. |+..+. ++..++++|+..+..
T Consensus 355 ~~~~~~~~~~~~~r~~-~al~~~~al~~~g~~gl~~~~~~~~~~a~~l~~~L~~~pg~~l~~~~~p~~~~v~f~~~p~~~ 433 (511)
T 3vp6_A 355 VSYDTGDKAIQCGRHV-DIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFEMVFNGEPEHTNVCFWYIPQSL 433 (511)
T ss_dssp GGGCCGGGSSCSSCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTEEESSSSCCSSSCEEEEECCGGG
T ss_pred cccCccCCCCCCCCch-HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCeEEEEEEEeCccc
Confidence 356777764 58999999999999999999999999999999999997 444444 356778888642210
Q ss_pred ------------------HHhhce------eec---cc--CCEEEEEE-cCCCCHHHHHHHHHHHHHHHHHH
Q 011842 409 ------------------EFVRRW------QLA---CQ--GNIAHVVV-MPNVTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 409 ------------------~~~~~~------~l~---~~--~~~lRv~~-~~~~T~edid~~~~~l~~~~~~~ 450 (476)
++.+.+ .+. .. .+.+|+++ ++.+|.+||++++++|+++.+.+
T Consensus 434 ~~~~~~~~~~~~l~~~~~~l~~~L~~~G~~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~ll~~i~~~~~~~ 505 (511)
T 3vp6_A 434 RGVPDSPQRREKLHKVAPKIKALMMESGTTMVGYQPQGDKANFFRMVISNPAATQSDIDFLIEEIERLGQDL 505 (511)
T ss_dssp SSCCCCHHHHHHHHHHHHHHHHHHHHHTSCEEEEEEETTEEEEEEECCCCTTCCHHHHHHHHHHHHHHHC--
T ss_pred cccccchhHHHHHHHHHHHHHHHHHhcCCEEEEEEEeCCceEEEEEEecCCCCCHHHHHHHHHHHHHHHHhh
Confidence 121111 111 12 24699988 89999999999999999887654
No 4
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=100.00 E-value=2.6e-44 Score=378.19 Aligned_cols=385 Identities=17% Similarity=0.208 Sum_probs=298.6
Q ss_pred ccccccCCCcccc----ccCCCCCcHHHHHHHHHHHHhcccccccCCCCcCCcc------hHHHHHHHHHhhCCCCCCcc
Q 011842 60 SCFSVTEPEADDE----FTGDKEAYMAGVLARYRKTLMERTKHHLGYPYNLDFD------YGALAQLQHFSINNLGDPFI 129 (476)
Q Consensus 60 ~~~~~~~p~~~~~----~~~~~~~~~~~il~~~~~~~~~~~~~~~g~p~~~~~~------~~~l~~~l~~~~n~~g~~~~ 129 (476)
+++...+|+++.. .+|+.|.+.+++++++.+.+.++.. +|.||.++++. ++.+.+++...+|+....|.
T Consensus 28 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~ 106 (486)
T 1js3_A 28 QVYPDVQPGYLRPLIPATAPQEPDTFEDILQDVEKIIMPGVT-HWHSPYFFAYFPTASSYPAMLADMLCGAIGCIGFSWA 106 (486)
T ss_dssp CSSCCCCTTCSGGGSCSSCCSSCCCHHHHHHHHHHTTGGGCC-CTTSTTBCSSSCCCCCHHHHHHHHHHHHHCCCCSSGG
T ss_pred CCCCCCCHHHHHHhccccCCCCCCCHHHHHHHHHHHHhcCCC-CCCCCCceEeCCCCCCHHHHHHHHHHHHhCcCccccc
Confidence 3455556666554 5689999999999999998878765 57788887764 56788999888887766665
Q ss_pred cCccchhhHHHHHHHHHHHHHHcCCCCC-------cccEEEcCCchhHHHHHHHHHHhhC--------C---------Cc
Q 011842 130 ESNYGVHSRQFEVGVLDWFARLWELENN-------EYWGYITNCGTEGNLHGILVGREVF--------P---------DG 185 (476)
Q Consensus 130 ~~~~~~~~~~le~~~~~~la~l~g~~~~-------~~~g~~t~ggt~An~~al~aa~~~~--------p---------~~ 185 (476)
.++ ...++|+++++|+++++|++.+ ...+++|+|||+||+.++.++++.. + +.
T Consensus 107 ~~~---~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~~~~~~~~~~~~gd~~~~~~~~~~ 183 (486)
T 1js3_A 107 ASP---ACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVRRLQAASPGLTQGAVLEKL 183 (486)
T ss_dssp GCH---HHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHE
T ss_pred cCh---hHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhhhhccCccchhcccCCCE
Confidence 554 6789999999999999999842 2458999999999999999887531 1 23
Q ss_pred EEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccCHHHHHHHHHcCC---CCcEEEEEeeCCCccccccCHHHHHHHHHH
Q 011842 186 ILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCADFKAKLLQNK---DKPAIINVNIGTTVKGAVDDLDLVIQTLEE 262 (476)
Q Consensus 186 ~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~~~Le~~l~~~~---~~p~~vv~t~gtt~tG~id~l~~I~~ia~~ 262 (476)
+|++++++|+|+.++++.+|++++.||+++++.||+++|+++|++++ .+|++|++++|+|++|.++|+++|+++|++
T Consensus 184 ~v~~s~~~h~s~~~~~~~~G~~v~~v~~d~~~~~d~~~L~~~i~~~~~~g~~p~~vv~~~~~n~tG~~~~l~~I~~la~~ 263 (486)
T 1js3_A 184 VAYASDQAHSSVERAGLIGGVKLKAIPSDGKFAMRASALQEALERDKAAGLIPFFVVATLGTTSCCSFDNLLEVGPICHE 263 (486)
T ss_dssp EEEEETTCCHHHHHHHHHHTCEEEEECCCTTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHH
T ss_pred EEEECCCCcHHHHHHHHhCCCceEEeecCCCCCCCHHHHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCCHHHHHHHHHH
Confidence 58899999999999999999999999998889999999999998654 357799999999999999999999999999
Q ss_pred hCCCCCceEEEEecCcccccccccccCCCCCCcccccEEEEcCCCCCCCCCCceeEEeehhh--hhhhcCCccccCCC--
Q 011842 263 SGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEH--INVLSSNVEYLASR-- 338 (476)
Q Consensus 263 ~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~--~~~l~~~~~yl~~~-- 338 (476)
||+ |+|||+||+++.+........+...+.+|++++++|||+++|++||+++++++. .+.+...+.|+...
T Consensus 264 ~~~-----~lhvD~a~g~~~~~~~~~~~~~~g~~~adsi~~~~hK~~~~p~~~G~l~~~~~~~l~~~~~~~~~yl~~~~~ 338 (486)
T 1js3_A 264 EDI-----WLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVNFDCSAMWVKRRTDLTGAFKLDPVYLKHSHQ 338 (486)
T ss_dssp TTC-----EEEEECTTGGGGGGSTTTGGGGTTGGGCSEEEECHHHHSSCCSSCEEEEESCHHHHHGGGC-----------
T ss_pred cCC-----EEEEehhhHHHHHHCHHHHHHhcCccccCeeEEchhhhcCCCcceEEEEEeCHHHHHHHhcCCchhhCCCcc
Confidence 999 999999999876543222222333446999999999999999999999998763 45665556676432
Q ss_pred ---------CCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCCeEe-ecCCeeEEEEecCCc-
Q 011842 339 ---------DATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAM-LNELSSTVVFERPQD- 407 (476)
Q Consensus 339 ---------~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~-~~~~~~iv~f~~~~~- 407 (476)
+.++.++|+. .++++|++++.+|.+++++++++..++++++.+.|++.+...+ .++..++++|+.++.
T Consensus 339 ~~~~~~~~~~~~~~~~rr~-~~~~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~ 417 (486)
T 1js3_A 339 GSGLITDYRHWQLPLGRRF-RSLKMWFVFRMYGVKGLQAYIRKHVQLSHEFEAFVLQDPRFEVCAEVTLGLVCFRLKGSD 417 (486)
T ss_dssp -CCSCCCGGGSSSCSCCCC-THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEECSCCCSSEEEEEESSCH
T ss_pred cccCCCCccccCCCCCCch-hHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCceeEEEEEecChH
Confidence 1234566664 4789999999999999999999999999999999999744444 446678888887532
Q ss_pred ---HHHhh-----cee-ec----ccCCEEEEEE-cCCCCHHHHHHHHHHHHHHHHHHHhcC
Q 011842 408 ---EEFVR-----RWQ-LA----CQGNIAHVVV-MPNVTIDKLDDFLNELIENRSTWYEDG 454 (476)
Q Consensus 408 ---~~~~~-----~~~-l~----~~~~~lRv~~-~~~~T~edid~~~~~l~~~~~~~~~~~ 454 (476)
.++.+ ++. +. .....+|+++ ++++|++||+++++.|+++.+++.++.
T Consensus 418 ~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~~~~~~ 478 (486)
T 1js3_A 418 GLNEALLERINSARKIHLVPCRLRGQFVLRFAICSRKVESGHVRLAWEHIRGLAAELLAAE 478 (486)
T ss_dssp HHHHHHHHHHHHHTSCBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHhcCCEEEEEEEECCEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHhhh
Confidence 22222 211 11 1236899995 788999999999999999988876543
No 5
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=100.00 E-value=1.3e-41 Score=358.65 Aligned_cols=365 Identities=19% Similarity=0.282 Sum_probs=285.4
Q ss_pred ccCCCCCcHHHHHHHHHHHHhcccccccCCCCcCCcc------hHHHHHHHHHhhCCCCCCcccCccchhhHHHHHHHHH
Q 011842 73 FTGDKEAYMAGVLARYRKTLMERTKHHLGYPYNLDFD------YGALAQLQHFSINNLGDPFIESNYGVHSRQFEVGVLD 146 (476)
Q Consensus 73 ~~~~~~~~~~~il~~~~~~~~~~~~~~~g~p~~~~~~------~~~l~~~l~~~~n~~g~~~~~~~~~~~~~~le~~~~~ 146 (476)
.+|+.|.+++++++++.+.+.++.. ++++|.++++. .+.+++++...+|.....|..++ ..+++|+++++
T Consensus 72 ~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~yl~~~~~~~~~~~v~~~~~~~~~n~~~~~~~~~~---~~~~le~~~~~ 147 (497)
T 2qma_A 72 DLDNKNAPLKSVIDDVAELVAKNAI-FTQHPDCIAHLHTPPLMPAVAAEAMIAALNQSMDSWDQAS---SATYVEQKVVN 147 (497)
T ss_dssp CSSSCCCCHHHHHHHHHHHTTTTSC-CTTSTTBCSSSCCCCBHHHHHHHHHHHHHCCCTTCGGGCH---HHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHhcCCC-CCCCCCeeEeCCCCCcHHHHHHHHHHHhhcccccchhhCh---HHHHHHHHHHH
Confidence 4689999999999999998877765 67788887763 56778888888887666665554 57899999999
Q ss_pred HHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhC-----------C------Cc-EEEecCCCchHHHHHHHHcCC--
Q 011842 147 WFARLWELENNEYWGYITNCGTEGNLHGILVGREVF-----------P------DG-ILYASRESHYSVFKAARMYRM-- 206 (476)
Q Consensus 147 ~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~-----------p------~~-~Vl~s~~~H~S~~~~~~~~G~-- 206 (476)
|+++++|++. ..++++|+|||+||+.+++++|++. + ++ +|+++..+|+|+.++++.+|+
T Consensus 148 ~la~~~g~~~-~~~~~~t~ggt~a~~~al~~ar~~~~~~~~~~~~~~~G~~~~~g~~~v~~s~~~h~s~~~~~~~~g~g~ 226 (497)
T 2qma_A 148 WLCDKYDLSE-KADGIFTSGGTQSNQMGLMLARDWIADKLSGHSIQKLGLPDYADKLRIVCSKKSHFTVQKSASWMGLGE 226 (497)
T ss_dssp HHHHHTTCCT-TCEEEEESSHHHHHHHHHHHHHHHHHHHHHCCCHHHHCSCGGGGGEEEEEETTSCTHHHHHHHHTTSCG
T ss_pred HHHHHhCCCC-CCCeEEcCCchHHHHHHHHHHHHHHHHhhcccchhhcccccccCCeEEEECCCchHHHHHHHHHcCCCc
Confidence 9999999974 2469999999999999999976421 2 34 899999999999999999987
Q ss_pred -eEEEEeCCCCCccCHHHHHHHHHcC---CCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCccccc
Q 011842 207 -ECVKVDCLISGEIDCADFKAKLLQN---KDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLM 282 (476)
Q Consensus 207 -~v~~v~~~~~g~~D~~~Le~~l~~~---~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~ 282 (476)
+++.||+++++.||+++|+++|+++ ..+|++|++++++|++|.++|+++|+++|++||+ |+|||+||+++.
T Consensus 227 ~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~vv~~~~~~~tG~~~~l~~I~~l~~~~~~-----~l~vD~a~~~~~ 301 (497)
T 2qma_A 227 KAVMTVDANADGTMDITKLDEVIAQAKAEGLIPFAIVGTAGTTDHGAIDDLDFIADMAVKHDM-----WMHVDGAYGGAL 301 (497)
T ss_dssp GGEEEECBCTTSSBCGGGHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTC-----EEEEEETTGGGG
T ss_pred ccEEEEecCCCCcCCHHHHHHHHHHHHHCCCcceEEEEcCCCCCCCCCCCHHHHHHHHHHcCC-----EEEEehhhhHHH
Confidence 7999999988999999999999864 2346788899999999999999999999999999 999999999877
Q ss_pred ccccccCCCCCCcccccEEEEcCCCCCCCCCCceeEEeehhh-hhhhcCCccccCCC--------CCcccCCCCChhHHH
Q 011842 283 MPFVKKAPKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEH-INVLSSNVEYLASR--------DATIMGSRNGHAPIF 353 (476)
Q Consensus 283 ~~~~~~~~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~-~~~l~~~~~yl~~~--------~~~~~~sr~~~~~l~ 353 (476)
.+.. ....+...+.+|++++++|||+++|++||+++++++. ++.+.....|+... +.++.++|+ +.+++
T Consensus 302 ~~~~-~~~~~~gi~~~D~i~~s~hK~l~~p~~~G~l~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~r~-~~al~ 379 (497)
T 2qma_A 302 ILSS-HKSRLKGVERAHSISVDFHKLFYQTISCGALLVNDKSNFKFLLHHADYLNREHDELPNLVDKSIATTKR-FDALK 379 (497)
T ss_dssp GGST-TGGGGTTGGGCSEEEEETTTTTCCCSSCEEEEESCGGGGGGGCC--------------------CCSCC-CTHHH
T ss_pred HhCc-chHhhcCcccCCEEEEcchhccCCCcceEEEEEeCHHHHHHhcCCchhcCCccccCCCccccCCCCCCc-hhHHH
Confidence 6543 2222333446899999999999999999999998763 55555555676432 123456775 45789
Q ss_pred HHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCCeEe-ecCCeeEEEEecCCc--------HHHh-----hceeec--
Q 011842 354 LWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAM-LNELSSTVVFERPQD--------EEFV-----RRWQLA-- 417 (476)
Q Consensus 354 ~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~-~~~~~~iv~f~~~~~--------~~~~-----~~~~l~-- 417 (476)
+|++++.+|.+++++++++..+++++|.+.|++.+...+ .++..++++|+..+. ..+. +++.+.
T Consensus 380 ~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~l~~~l~~~G~~~~~~ 459 (497)
T 2qma_A 380 VFMTMQNVGPKALGDMYDHLLAQTLEVADMIRTNDQFELLAEPSLSTVLFRATHETADLDELNKALRLEALTRGIAVLGE 459 (497)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHTCTTEEECSCCSSSEEEEEECCSSSCHHHHHHHHHHHHHHHTSCBCEE
T ss_pred HHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEcCCCceEEEEEEcCCccCHHHHHHHHHHHHHhCCCEEEEe
Confidence 999999999999999999999999999999999744444 456678888886432 1121 122221
Q ss_pred ---ccCCEEEEEE-cCCCCHHHHHHHHHHHHHHHHH
Q 011842 418 ---CQGNIAHVVV-MPNVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 418 ---~~~~~lRv~~-~~~~T~edid~~~~~l~~~~~~ 449 (476)
.....+|+++ ++.+|++||++++++|+++.++
T Consensus 460 ~~~~g~~~lRis~~~~~~t~edi~~~~~~l~~~~~~ 495 (497)
T 2qma_A 460 TIVDGKTALKFTILNPCLTTSDFESLLSKINMLAVE 495 (497)
T ss_dssp EEETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred eEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHh
Confidence 1235799997 8999999999999999988765
No 6
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=100.00 E-value=3e-41 Score=356.52 Aligned_cols=380 Identities=22% Similarity=0.278 Sum_probs=294.8
Q ss_pred ccccccCCCccc-------cccCCCCCcHHHHHHHHHHHHhcccccccCCCCcCCcc------hHHHHHHHHHhhCCCCC
Q 011842 60 SCFSVTEPEADD-------EFTGDKEAYMAGVLARYRKTLMERTKHHLGYPYNLDFD------YGALAQLQHFSINNLGD 126 (476)
Q Consensus 60 ~~~~~~~p~~~~-------~~~~~~~~~~~~il~~~~~~~~~~~~~~~g~p~~~~~~------~~~l~~~l~~~~n~~g~ 126 (476)
+++...+|+.+. .++|+.|.+.+++++++++.+..+.. ++||.++++. .+.+++++...+|..+.
T Consensus 45 ~~~~~~~p~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~--~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~ 122 (504)
T 2okj_A 45 KVLDFHHPHQLLEGMEGFNLELSDHPESLEQILVDCRDTLKYGVR--TGHPRFFNQLSTGLDIIGLAGEWLTSTANTNMF 122 (504)
T ss_dssp CSCCCCCHHHHHSCBTTBCCCCCSSCCCHHHHHHHHHHHHHTSCC--TTCTTEESSSSCCCCHHHHHHHHHHHHHCCBSS
T ss_pred CCCCCCCHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHHhhccCC--CCCCCEEEEccCCCCHHHHHHHHHHHhhccCCC
Confidence 455555665543 36789999999999999888766553 3578877653 45667888888887776
Q ss_pred CcccCccchhhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhh------CCC-----c-EEEecCCCc
Q 011842 127 PFIESNYGVHSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREV------FPD-----G-ILYASRESH 194 (476)
Q Consensus 127 ~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~------~p~-----~-~Vl~s~~~H 194 (476)
.|..++ ..+++|+++++|+++++|++.+..++++|+|||+||++++++++++ .+| + +|+++..+|
T Consensus 123 ~~~~~~---~~~~le~~~~~~la~~~g~~~~~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~~~h 199 (504)
T 2okj_A 123 TYEIAP---VFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSH 199 (504)
T ss_dssp CTTTCH---HHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSC
T ss_pred chhhCh---HHHHHHHHHHHHHHHHhCCCCCCCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCcch
Confidence 666554 5689999999999999999843456999999999999999998752 133 4 899999999
Q ss_pred hHHHHHHHHcCC---eEEEEeCCCCCccCHHHHHHHHHcC---CCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCC
Q 011842 195 YSVFKAARMYRM---ECVKVDCLISGEIDCADFKAKLLQN---KDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQD 268 (476)
Q Consensus 195 ~S~~~~~~~~G~---~v~~v~~~~~g~~D~~~Le~~l~~~---~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~ 268 (476)
+|+.++++.+|+ +++.||+++++.||+++|+++|+++ +.+|.+|++++|+|++|.++|+++|+++|++||+
T Consensus 200 ~s~~~~~~~~g~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~l~~I~~la~~~g~--- 276 (504)
T 2okj_A 200 YSIKKAGAALGFGTDNVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNL--- 276 (504)
T ss_dssp THHHHHHHHTTSCGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCCHHHHHHHHHHHTC---
T ss_pred HHHHHHHHHcCCCcccEEEEecCCCCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCC---
Confidence 999999999987 8999999888999999999999763 3357799999999999999999999999999999
Q ss_pred ceEEEEecCcccccccccccCCCCCCcccccEEEEcCCCCCCCCCCceeEEeehh-hhh-hhcCCccccCCCC-------
Q 011842 269 RFYIHCDGALFGLMMPFVKKAPKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRME-HIN-VLSSNVEYLASRD------- 339 (476)
Q Consensus 269 ~~~lhvD~a~~g~~~~~~~~~~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~-~~~-~l~~~~~yl~~~~------- 339 (476)
|+|||+||+++.++.......+++.+.+|++++++|||+++|++||+++++++ +++ .+.....|+.+..
T Consensus 277 --~lhvD~a~~~~~~~~~~~~~~~~g~~~~D~i~~~~hK~~~~p~~~g~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 354 (504)
T 2okj_A 277 --WLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAILVKEKGILQGCNQMCAGYLFQPDKQYDVSY 354 (504)
T ss_dssp --EEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESSTTHHHHHHCCCCSSSCCSCCSSCGGG
T ss_pred --EEEEehhhhhHHHhCHhhHhhcCCcccCCEEEECchhhcCCCcceEEEEEECHHHHHHHhcCCCccccCCcccccCcC
Confidence 99999999988765433333344445699999999999999999999999985 544 3445566774321
Q ss_pred ----CcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCCeEee---cCCeeEEEEec-CCc----
Q 011842 340 ----ATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAML---NELSSTVVFER-PQD---- 407 (476)
Q Consensus 340 ----~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~---~~~~~iv~f~~-~~~---- 407 (476)
.++.++|+. .++++|++++.+|.+++++++++..+++++|.+.|++.+...+. ++..++++|+. +..
T Consensus 355 ~~~~~~~~~~rr~-~~l~~~a~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~p~~~~v~f~~~~~~~~~~ 433 (504)
T 2okj_A 355 DTGDKAIQCGRHV-DIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFEMVFNGEPEHTNVCFWYIPQSLRGV 433 (504)
T ss_dssp CCGGGSSCSSCBC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEESSSSCCSSSCEEEEECCGGGSSC
T ss_pred CcccCCCCCCCCc-cHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCeEEEEEEEeCcccccc
Confidence 234666664 47899999999999999999999999999999999997434443 35566777764 321
Q ss_pred --------------HHHhh-----c-eeec---ccC--CEEEEEEc-CCCCHHHHHHHHHHHHHHHHHH
Q 011842 408 --------------EEFVR-----R-WQLA---CQG--NIAHVVVM-PNVTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 408 --------------~~~~~-----~-~~l~---~~~--~~lRv~~~-~~~T~edid~~~~~l~~~~~~~ 450 (476)
..+.+ + +.+. ..+ +.+|+++. +.+|++||++++++|+++.+++
T Consensus 434 ~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edi~~~~~~l~~~~~~~ 502 (504)
T 2okj_A 434 PDSPQRREKLHKVAPKIKALMMESGTTMVGYQPQGDKANFFRMVISNPAATQSDIDFLIEEIERLGQDL 502 (504)
T ss_dssp CCCHHHHHHHTTHHHHHHHHHHHHTSCEEEEEEETTEEEEEEECCCCTTCCHHHHHHHHHHHHHHHTC-
T ss_pred ccchhhHHHHHHHHHHHHHHHHhCCcEEEEeeEECCceEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 11211 2 1121 122 58999985 9999999999999999887543
No 7
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=100.00 E-value=2.9e-41 Score=351.81 Aligned_cols=372 Identities=20% Similarity=0.203 Sum_probs=292.5
Q ss_pred cccCCCCCcHHHHHHHHHHHHhcccccccCCCCcCCc-chHHHHHHHHHhhCCCCCCcccCccchhhHHHHHHHHHHHHH
Q 011842 72 EFTGDKEAYMAGVLARYRKTLMERTKHHLGYPYNLDF-DYGALAQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFAR 150 (476)
Q Consensus 72 ~~~~~~~~~~~~il~~~~~~~~~~~~~~~g~p~~~~~-~~~~l~~~l~~~~n~~g~~~~~~~~~~~~~~le~~~~~~la~ 150 (476)
.++|+.|.+.+++++++.+.+.......+.+|.+.+. ..+.+.+++...++.....+..++ +..++|+++++|+++
T Consensus 16 ~~lp~~g~~~~~v~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~e~~~~a~~~~~~~~~~~~---~~~~l~~~~~~~la~ 92 (452)
T 2dgk_A 16 KRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDENVHKLMDLSINKNWIDKEEYP---QSAAIDLRCVNMVAD 92 (452)
T ss_dssp CSCCCSCCCHHHHHHHHHHHGGGSCCCTTBCSCCSCCCCCHHHHHHHHHTTTCBTTCTTTCH---HHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHhcCCCCCccCCCCeeCCCchHHHHHHHHHHhccCCCChhhCh---hHHHHHHHHHHHHHH
Confidence 3688999999999999999884332235667777653 345778888877775444444443 678999999999999
Q ss_pred HcCCCCCc---ccEEEcCCchhHHHHHHHHHHhhC------CC-----cEEEecCCCchHHHHHHHHcCCeEEEEeCCC-
Q 011842 151 LWELENNE---YWGYITNCGTEGNLHGILVGREVF------PD-----GILYASRESHYSVFKAARMYRMECVKVDCLI- 215 (476)
Q Consensus 151 l~g~~~~~---~~g~~t~ggt~An~~al~aa~~~~------p~-----~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~- 215 (476)
++|++.+. ..+++|+|||+||+++++++++.. +| ++|++++ +|+++.++++++|++++.||+++
T Consensus 93 l~g~~~~~~~~~~~~~t~ggtea~~~al~a~~~~~~~~~~~~G~~~~~~~vi~~~-~h~~~~~~~~~~G~~v~~v~~~~~ 171 (452)
T 2dgk_A 93 LWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPMRPG 171 (452)
T ss_dssp HTTCCCCTTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEESS-CCHHHHHHHHHTTCEEEECCCBTT
T ss_pred HhCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEECC-CcHHHHHHHHHcCceEEEEecCCC
Confidence 99998542 258999999999999999887521 33 5899999 99999999999999999999986
Q ss_pred CCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHh------CCCCCceEEEEecCcccccccccccC
Q 011842 216 SGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEES------GFTQDRFYIHCDGALFGLMMPFVKKA 289 (476)
Q Consensus 216 ~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~------g~~~~~~~lhvD~a~~g~~~~~~~~~ 289 (476)
++.+|+++|+++|++++ .+|++++|+|++|.++|+++|+++|++| |+ |+|||+||+++..++....
T Consensus 172 ~~~~d~~~l~~~i~~~t---~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~-----~l~vD~a~~~~~~~~~~~~ 243 (452)
T 2dgk_A 172 QLFMDPKRMIEACDENT---IGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDI-----DMHIDAASGGFLAPFVAPD 243 (452)
T ss_dssp BCSCCHHHHHHHCCTTE---EEEECBBSCTTTCBBCCHHHHHHHHHHHHHHHCCCC-----CEEEECTTGGGTHHHHCTT
T ss_pred CCeECHHHHHHHHhhCC---EEEEEEcCCcCCcccCCHHHHHHHHHHHhhccCCCC-----cEEEEcccHHHHHHhhCcc
Confidence 79999999999997654 5899999999999999999999999996 99 9999999998765432221
Q ss_pred CCCCC-cccccEEEEcCCCCCCCCCCceeEEeehh-hh-hhhcCCccccCCC--CCcccCCCCChhHHHHHHHHHHhChh
Q 011842 290 PKVSF-KKPIGSVSVSGHKFVGCPMPCGVQITRME-HI-NVLSSNVEYLASR--DATIMGSRNGHAPIFLWYTLNRKGYK 364 (476)
Q Consensus 290 ~~~~~-~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~-~~-~~l~~~~~yl~~~--~~~~~~sr~~~~~l~~~~~l~~~g~~ 364 (476)
..+++ ..++|++++++|||+++|+++|+++++++ ++ +.+...+.|+... ..++.++|++...+++|++++.++.+
T Consensus 244 ~~~~~~~~~~d~~~~~~hK~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~aal~~lg~~ 323 (452)
T 2dgk_A 244 IVWDFRLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGRE 323 (452)
T ss_dssp CCCSTTSTTEEEEEEETTTTTCCCSSCEEEEESSGGGSCGGGCEEECCTTCCEEECCSCCSCBCHHHHHHHHHHHHHHHH
T ss_pred chhhcCCCCCcEEEECcccccCCCCCeEEEEEcCHHHHHHHhccCccccCCCCCCcccCCCChhHHHHHHHHHHHHHhHH
Confidence 12333 23599999999999999999999999875 33 5555556676542 23467888887789999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHHHhcCCeEee-c----CCeeEEEEecCCc-------HHHh-----hceeec-----c---c
Q 011842 365 GFQKEVQKCLRNAHYLKDRLLDAGISAML-N----ELSSTVVFERPQD-------EEFV-----RRWQLA-----C---Q 419 (476)
Q Consensus 365 g~~~~~~~~~~~a~~l~~~L~~~g~~~~~-~----~~~~iv~f~~~~~-------~~~~-----~~~~l~-----~---~ 419 (476)
++++++++..+++++|.+.|++.+...+. + +..++++|+.++. .++. +++.+. . .
T Consensus 324 g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~ 403 (452)
T 2dgk_A 324 GYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGEDPGYTLYDLSERLRLRGWQVPAFTLGGEATD 403 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSSEEEEEECCTTTBSSEEEEEECTTCCCSCCHHHHHHHHHHTTCBCCEEECSTTCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCCeEEEEEEecCcccccCCHHHHHHHHHhcCCeeeeeeCCcccCC
Confidence 99999999999999999999998644443 3 3468888886531 3332 233221 1 2
Q ss_pred CCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhcCC
Q 011842 420 GNIAHVVVMPNVTIDKLDDFLNELIENRSTWYEDGK 455 (476)
Q Consensus 420 ~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~~~~~ 455 (476)
...+|++++..+|++|+|+|+++|+++.+.+.+.+.
T Consensus 404 ~~~lRis~~~~~t~e~id~li~~l~~~~~~~~~~~~ 439 (452)
T 2dgk_A 404 IVVMRIMCRRGFEMDFAELLLEDYKASLKYLSDHPK 439 (452)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHCGG
T ss_pred eEEEEEEecCCCCHHHHHHHHHHHHHHHHHHHhCCC
Confidence 358999999999999999999999999888876543
No 8
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=100.00 E-value=3.7e-41 Score=356.77 Aligned_cols=377 Identities=20% Similarity=0.249 Sum_probs=290.2
Q ss_pred cccccccCCCcccc----ccCCCCCcHHHHHHHHHHHHhcccccccCCCCcCCcc------hHHHHHHHHHhhCCCCCCc
Q 011842 59 ASCFSVTEPEADDE----FTGDKEAYMAGVLARYRKTLMERTKHHLGYPYNLDFD------YGALAQLQHFSINNLGDPF 128 (476)
Q Consensus 59 ~~~~~~~~p~~~~~----~~~~~~~~~~~il~~~~~~~~~~~~~~~g~p~~~~~~------~~~l~~~l~~~~n~~g~~~ 128 (476)
.+++...+|+.+.. ++|+.|.+.+++++++++.+..+.+ +++|.++++. .+.+++++....|.....|
T Consensus 63 ~~v~~~~~p~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~--~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~ 140 (515)
T 2jis_A 63 QKVCEWKEPEELKQLLDLELRSQGESQKQILERCRAVIRYSVK--TGHPRFFNQLFSGLDPHALAGRIITESLNTSQYTY 140 (515)
T ss_dssp SCSCCCCCHHHHHHHHCCCCCSSCCCHHHHHHHHHHHHHHSCC--TTSTTEESSSCCCCCHHHHHHHHHHHHHCCCTTCT
T ss_pred CCCCCCCCHHHHHhhcccCCCCCCCCHHHHHHHHHHHhcCCCC--CCCCCeEEEeeCCCCHHHHHHHHHHHHhccCCCch
Confidence 35666677776653 7899999999999999887776653 3477776553 4566788887777766666
Q ss_pred ccCccchhhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhC------CCc------EEEecCCCchH
Q 011842 129 IESNYGVHSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVF------PDG------ILYASRESHYS 196 (476)
Q Consensus 129 ~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~------p~~------~Vl~s~~~H~S 196 (476)
..++ ...++|.++++|+++++|++. ..+++|+|||+||+.++.+++++. +|+ +|++++.+|+|
T Consensus 141 ~~s~---~~~~le~~~~~~la~l~g~~~--~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~s 215 (515)
T 2jis_A 141 EIAP---VFVLMEEEVLRKLRALVGWSS--GDGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYS 215 (515)
T ss_dssp TTCH---HHHHHHHHHHHHHHHHHTCSS--CEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTH
T ss_pred hhch---HHHHHHHHHHHHHHHHhCCCC--CCeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCccHH
Confidence 6554 678999999999999999973 459999999999999999987421 343 89999999999
Q ss_pred HHHHHHHcCC---eEEEEeCCCCCccCHHHHHHHHHcC---CCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCce
Q 011842 197 VFKAARMYRM---ECVKVDCLISGEIDCADFKAKLLQN---KDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRF 270 (476)
Q Consensus 197 ~~~~~~~~G~---~v~~v~~~~~g~~D~~~Le~~l~~~---~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~ 270 (476)
+.++++.+|+ +++.||+++++.+|+++|+++|.++ +.+|.+|++++++|++|.++|+++|+++|++||+
T Consensus 216 ~~~~~~~~g~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~l~~I~~la~~~g~----- 290 (515)
T 2jis_A 216 IQKGAAFLGLGTDSVRVVKADERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDPLEAIADVCQRHGL----- 290 (515)
T ss_dssp HHHHHHHTTSCGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTC-----
T ss_pred HHHHHHHcCCCCCcEEEEecCCCCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHcCC-----
Confidence 9999999998 8999999888999999999999763 3357799999999999999999999999999999
Q ss_pred EEEEecCcccccccccccCCCCCCcccccEEEEcCCCCCCCCCCceeEEeehh--hhhh-hcCCccccCCCC--------
Q 011842 271 YIHCDGALFGLMMPFVKKAPKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRME--HINV-LSSNVEYLASRD-------- 339 (476)
Q Consensus 271 ~lhvD~a~~g~~~~~~~~~~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~--~~~~-l~~~~~yl~~~~-------- 339 (476)
|+|||+||+++.++.......+...+.+|++++++|||+++|.+||+++++++ +++. +...+.|+.+..
T Consensus 291 ~l~vD~a~~~~~~~~~~~~~~~~g~~~aD~v~~s~hK~l~~p~g~G~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~ 370 (515)
T 2jis_A 291 WLHVDAAWGGSVLLSQTHRHLLDGIQRADSVAWNPHKLLAAGLQCSALLLQDTSNLLKRCHGSQASYLFQQDKFYDVALD 370 (515)
T ss_dssp EEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEESCCSCHHHHHHCC---------CCSCGGGC
T ss_pred eEEEehhhhhHHHhChhhHhhcCCCccCCEEEECcccccCCCCCeeEEEEeChHHHHHHHhcCCchhccCCcccccccCC
Confidence 99999999988776443332344445699999999999999999999999987 5543 444556664321
Q ss_pred ---CcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhc-CCeEeecCCeeEEEEec-CC-------c
Q 011842 340 ---ATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDA-GISAMLNELSSTVVFER-PQ-------D 407 (476)
Q Consensus 340 ---~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~-g~~~~~~~~~~iv~f~~-~~-------~ 407 (476)
.++.++|+. .++++|++++.+|.+|+++++++..+++++|.+.|++. ++..+.++..++++|+. |. .
T Consensus 371 ~~~~~~~~~rr~-~al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~~~~~~v~f~~~p~~~~~~~~~ 449 (515)
T 2jis_A 371 TGDKVVQCGRRV-DCLKLWLMWKAQGDQGLERRIDQAFVLARYLVEEMKKREGFELVMEPEFVNVCFWFVPPSLRGKQES 449 (515)
T ss_dssp CGGGCSCSSCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSCCSSSEEEEEECCGGGTTCTTS
T ss_pred CCCCCCCCCCcc-cHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCeeEEEEEEeCccccccccc
Confidence 234566653 47899999999999999999999999999999999997 44434445556677754 21 1
Q ss_pred HH-----------Hh-----hce-eec-----ccCCEEEEEE-cCCCCHHHHHHHHHHHHHHHH
Q 011842 408 EE-----------FV-----RRW-QLA-----CQGNIAHVVV-MPNVTIDKLDDFLNELIENRS 448 (476)
Q Consensus 408 ~~-----------~~-----~~~-~l~-----~~~~~lRv~~-~~~~T~edid~~~~~l~~~~~ 448 (476)
.+ +. ++. .+. ...+.+|+++ ++.+|++|||+++++|+++.+
T Consensus 450 ~~~~~~l~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edid~~~~~l~~~~~ 513 (515)
T 2jis_A 450 PDYHERLSKVAPVLKERMVKEGSMMIGYQPHGTRGNFFRVVVANSALTCADMDFLLNELERLGQ 513 (515)
T ss_dssp TTHHHHHHTHHHHHHHHHHHHTSCEEEEEEETTEEEEEEEECCCTTCCHHHHHHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHHHHHHHHhcCCEEEEEEEECCceEEEEEEeCCCCCCHHHHHHHHHHHHHHHh
Confidence 11 11 111 111 1135899999 899999999999999988754
No 9
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=100.00 E-value=6.5e-39 Score=338.37 Aligned_cols=370 Identities=19% Similarity=0.188 Sum_probs=289.3
Q ss_pred ccCCCCCcHHHHHHHHHHHHhcccccccCCCCc------CCcchHHHHHHHHHhhCCCCCCcccCccchhhHHHHHHHHH
Q 011842 73 FTGDKEAYMAGVLARYRKTLMERTKHHLGYPYN------LDFDYGALAQLQHFSINNLGDPFIESNYGVHSRQFEVGVLD 146 (476)
Q Consensus 73 ~~~~~~~~~~~il~~~~~~~~~~~~~~~g~p~~------~~~~~~~l~~~l~~~~n~~g~~~~~~~~~~~~~~le~~~~~ 146 (476)
.+|+.+..++++++.+.+.+... |+|.. ..+....+.+++...++.....+..++ ...++|+++++
T Consensus 31 ~~p~~~~~~~~~~~~~~~~i~l~-----gnp~~~l~s~~t~~~~~~v~~~l~~~~~~~~~~~~~~p---~~~~le~~~~~ 102 (502)
T 3hbx_A 31 KMPENSIPKEAAYQIINDELMLD-----GNPRLNLASFVTTWMEPECDKLIMSSINKNYVDMDEYP---VTTELQNRCVN 102 (502)
T ss_dssp SCCSSCCCHHHHHHHHHHHGGGS-----CCGGGBTTCCSCCCCCHHHHHHHHHTTTCBTTCTTTCH---HHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHhccC-----CCCCceeccccCCCCCHHHHHHHHHHhccCCCChhcCh---hHHHHHHHHHH
Confidence 67899999999999999887543 23331 122346677777777776554454443 57899999999
Q ss_pred HHHHHcCCC--CC-cccEEEcCCchhHHHHHHHHHHhhC------CCc-----EEEecCCCchHHHHHHHHcCCeEEEEe
Q 011842 147 WFARLWELE--NN-EYWGYITNCGTEGNLHGILVGREVF------PDG-----ILYASRESHYSVFKAARMYRMECVKVD 212 (476)
Q Consensus 147 ~la~l~g~~--~~-~~~g~~t~ggt~An~~al~aa~~~~------p~~-----~Vl~s~~~H~S~~~~~~~~G~~v~~v~ 212 (476)
|+++++|++ ++ ...|++|+|||+||++++++++... +|+ .|++++.+|+++.++++++|++++.||
T Consensus 103 ~la~l~g~~~~~~~~~~g~~t~ggtea~~~a~~a~~~~~~~~~~~~G~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~ 182 (502)
T 3hbx_A 103 MIAHLFNAPLEEAETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPVDKPNIVTGANVQVCWEKFARYFEVELKEVK 182 (502)
T ss_dssp HHHHHTTCCCCSSCCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEEETTCCHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHhCCCcccccCCcceecCcHHHHHHHHHHHHHHHHhHHHHhcCCCCCCcEEEEcCCchHHHHHHHHHcCceeEEEe
Confidence 999999998 22 2357789999999999998876531 244 899999999999999999999999999
Q ss_pred CCCC-CccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHh------CCCCCceEEEEecCcccccccc
Q 011842 213 CLIS-GEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEES------GFTQDRFYIHCDGALFGLMMPF 285 (476)
Q Consensus 213 ~~~~-g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~------g~~~~~~~lhvD~a~~g~~~~~ 285 (476)
++++ +.+|+++|+++|.+++ .+|++++++|++|.++|+++|+++|+++ |+ |+|||+||++++.++
T Consensus 183 ~~~~~~~~d~~~l~~~i~~~t---~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~-----~l~VD~A~~~~~~p~ 254 (502)
T 3hbx_A 183 LSEGYYVMDPQQAVDMVDENT---ICVAAILGSTLNGEFEDVKLLNDLLVEKNKETGWDT-----PIHVDAASGGFIAPF 254 (502)
T ss_dssp CBTTBCSCCHHHHHHHCCTTE---EEEEEEBSCTTTCCBCCHHHHHHHHHHHHHHHCCCC-----CEEEECTTGGGTHHH
T ss_pred cCCCcCcCCHHHHHHHHhhCC---EEEEEecCCCCCCcccCHHHHHHHHHHhhhccCCCC-----eEEEECCccchhhhh
Confidence 9865 8999999999997654 5888999999999999999999999999 99 999999999876543
Q ss_pred cccCCCCCCc-ccccEEEEcCCCCCCCCCCceeEEeehh-hh-hhhcCCccccCCCC--CcccCCCCChhHHHHHHHHHH
Q 011842 286 VKKAPKVSFK-KPIGSVSVSGHKFVGCPMPCGVQITRME-HI-NVLSSNVEYLASRD--ATIMGSRNGHAPIFLWYTLNR 360 (476)
Q Consensus 286 ~~~~~~~~~~-~~~Dsi~~s~hK~l~~p~~~G~l~~~~~-~~-~~l~~~~~yl~~~~--~~~~~sr~~~~~l~~~~~l~~ 360 (476)
......+++. .++|++++++|||+++|.++|+++++++ .+ +.+.....|+.... .++.++|++..++++|++++.
T Consensus 255 ~~~~~~~~~~~~~~D~v~~s~hK~l~~p~g~G~~~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~sr~~~~~~a~~~al~~ 334 (502)
T 3hbx_A 255 LYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIR 334 (502)
T ss_dssp HCTTCCCSTTSTTEEEEEEETTTTTCCCSSCEEEEESSGGGSCGGGCEEECSSSSCEEECCSCCSCBSHHHHHHHHHHHH
T ss_pred hCcccccccCCCCceEEEECcccccCCCCCeEEEEEeCHHHhhHHhccCcccccCCCCCccccCCchHHHHHHHHHHHHH
Confidence 3222223333 3599999999999999999999999865 33 44455567776543 345688888788999999999
Q ss_pred hChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeec--CCeeEEEEecCCc-----HHHh-----hceeec-----c---cC
Q 011842 361 KGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLN--ELSSTVVFERPQD-----EEFV-----RRWQLA-----C---QG 420 (476)
Q Consensus 361 ~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~--~~~~iv~f~~~~~-----~~~~-----~~~~l~-----~---~~ 420 (476)
++.+++++++++..+++++|.+.|++.|...+.+ +..++++|+.+++ ..+. +++.+. . ..
T Consensus 335 lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~p~~~~~~ 414 (502)
T 3hbx_A 335 LGHEGYRNVMENCRENMIVLREGLEKTERFNIVSKDEGVPLVAFSLKDSSCHTEFEISDMLRRYGWIVPAYTMPPNAQHI 414 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEECSCSSSSSEEEEEESSCSSCCHHHHHHHHHTTTCBCCEEECCTTCTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCCCceEEEEEecCCCcCCHHHHHHHHHhCCcEEeeccCCcccCCc
Confidence 9999999999999999999999999998444443 4678999987542 1222 234332 1 23
Q ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 011842 421 NIAHVVVMPNVTIDKLDDFLNELIENRSTWYEDGKRQP 458 (476)
Q Consensus 421 ~~lRv~~~~~~T~edid~~~~~l~~~~~~~~~~~~~~~ 458 (476)
..+|++++..+|.+|+|+|+++|+++.+.+.+.....+
T Consensus 415 ~~lRisv~~~~t~edid~li~~L~~~l~~l~~~~~~~~ 452 (502)
T 3hbx_A 415 TVLRVVIREDFSRTLAERLVIDIEKVMRELDELPSRVI 452 (502)
T ss_dssp EEEEEECCTTCCHHHHHHHHHHHHHHHHHHHTCC----
T ss_pred eEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHhCccccc
Confidence 58999999999999999999999999998877655444
No 10
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=2.7e-34 Score=291.57 Aligned_cols=361 Identities=23% Similarity=0.319 Sum_probs=275.1
Q ss_pred ccCCCCCcHHHHHHHHHHHHhcccc----cccCCCCcCCcchHHHHHHHHHhhCCCCCCcccCccchhhHHHHHHHHHHH
Q 011842 73 FTGDKEAYMAGVLARYRKTLMERTK----HHLGYPYNLDFDYGALAQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWF 148 (476)
Q Consensus 73 ~~~~~~~~~~~il~~~~~~~~~~~~----~~~g~p~~~~~~~~~l~~~l~~~~n~~g~~~~~~~~~~~~~~le~~~~~~l 148 (476)
++|+.+.+.+++++.+.+....... .++|+..... ++.....+.....+..+... .+ .+..++++++++++
T Consensus 4 ~lp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~a~~~~~~~~~~~~~-~~---~~~~~~~~~l~~~l 78 (397)
T 3f9t_A 4 NMQEKGVSEKEILEELKKYRSLDLKYEDGNIFGSMCSNV-LPITRKIVDIFLETNLGDPG-LF---KGTKLLEEKAVALL 78 (397)
T ss_dssp SCCSSCCCHHHHHHHHHHHHTTSCCGGGTCBCSCSCCCC-CTHHHHHHHHHTTCCTTSGG-GB---HHHHHHHHHHHHHH
T ss_pred cCCCCCCCHHHHHHHHHHhhccCCCCCCCCeEEEecCCC-cHHHHHHHHHHHhhcCCCcc-cC---hhHHHHHHHHHHHH
Confidence 5788999999999999987644322 2333332211 12333333333333333222 22 25679999999999
Q ss_pred HHHcCCCCCcccEEEcCCchhHHHHHHHHHHhh-----------CCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCC
Q 011842 149 ARLWELENNEYWGYITNCGTEGNLHGILVGREV-----------FPDGILYASRESHYSVFKAARMYRMECVKVDCLISG 217 (476)
Q Consensus 149 a~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~-----------~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g 217 (476)
++++|.+++ ++++|+|||+|+..++.+++.. .+++.|+++.++|.++..+++.+|++++.+|.++++
T Consensus 79 a~~~~~~~~--~i~~~~ggt~a~~~~~~~~~~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 156 (397)
T 3f9t_A 79 GSLLNNKDA--YGHIVSGGTEANLMALRCIKNIWREKRRKGLSKNEHPKIIVPITAHFSFEKGREMMDLEYIYAPIKEDY 156 (397)
T ss_dssp HHHTTCTTC--EEEEESCHHHHHHHHHHHHHHHHHHHHHTTCCCCSSCEEEEETTCCTHHHHHHHHHTCEEEEECBCTTS
T ss_pred HHHhCCCCC--CEEEecCcHHHHHHHHHHHHHHHHhhhhhcccCCCCeEEEECCcchhHHHHHHHHcCceeEEEeeCCCC
Confidence 999999753 5899999999999999998763 248999999999999999999999999999999889
Q ss_pred ccCHHHHHHHHHc-CCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCccccccccccc-------C
Q 011842 218 EIDCADFKAKLLQ-NKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKK-------A 289 (476)
Q Consensus 218 ~~D~~~Le~~l~~-~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~-------~ 289 (476)
.+|+++|++++++ +++ +|++++++|++|.+.|+++|.++|++||+ |+|+|++|+++.++.... .
T Consensus 157 ~~d~~~l~~~i~~~~~~---~v~~~~~~nptG~~~~l~~i~~l~~~~~~-----~li~Dea~~~~~~~~~~~~~~~~~~~ 228 (397)
T 3f9t_A 157 TIDEKFVKDAVEDYDVD---GIIGIAGTTELGTIDNIEELSKIAKENNI-----YIHVDAAFGGLVIPFLDDKYKKKGVN 228 (397)
T ss_dssp SBCHHHHHHHHHHSCCC---EEEEEBSCTTTCCBCCHHHHHHHHHHHTC-----EEEEECTTGGGTGGGCCGGGCCTTCC
T ss_pred cCCHHHHHHHHhhcCCe---EEEEECCCCCCCCCCCHHHHHHHHHHhCC-----eEEEEccccchhhhhccccccccccc
Confidence 9999999999988 554 78888999999999999999999999999 999999998776643321 0
Q ss_pred CCCCCcccccEEEEcCCCCCCCCCCceeEEeehhh-hhhhcCCccccCCC-CCcccCCCCChhHHHHHHHHHHhChhcHH
Q 011842 290 PKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEH-INVLSSNVEYLASR-DATIMGSRNGHAPIFLWYTLNRKGYKGFQ 367 (476)
Q Consensus 290 ~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~-~~~l~~~~~yl~~~-~~~~~~sr~~~~~l~~~~~l~~~g~~g~~ 367 (476)
..+++...+|+++.++||++++|.++|+++++++. .+.+.....|+... ...+.+++++...+.+|++++.++..+++
T Consensus 229 ~~~~~~~~~~~~~~s~~K~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 308 (397)
T 3f9t_A 229 YKFDFSLGVDSITIDPHKMGHCPIPSGGILFKDIGYKRYLDVDAPYLTETRQATILGTRVGFGGACTYAVLRYLGREGQR 308 (397)
T ss_dssp CCCSGGGTCSEEECCTTTTTCCCSSCEEEEESSGGGGGGTCEECTTSSSSEECSSCSSCCSHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccCCeEEEccccccCCCCCceEEEEeCHHHHHhhccCCccccCCCccccccccccchHHHHHHHHHHHhHHHHH
Confidence 01222125899999999999989999999998774 44444334454432 23345777777788899999988888899
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecCCcHHHhh-----ceeeccc--CCEEEEEEcCCCCHHHHHHHH
Q 011842 368 KEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERPQDEEFVR-----RWQLACQ--GNIAHVVVMPNVTIDKLDDFL 440 (476)
Q Consensus 368 ~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~~~~~~~-----~~~l~~~--~~~lRv~~~~~~T~edid~~~ 440 (476)
+++++..++++++.+.|++.++..+.++..+++.|..++..++.+ ++.+... .+.+|++++..+|+++|++++
T Consensus 309 ~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~Ri~~~~~~~~e~i~~~~ 388 (397)
T 3f9t_A 309 KIVNECMENTLYLYKKLKENNFKPVIEPILNIVAIEDEDYKEVCKKLRDRGIYVSVCNCVKALRIVVMPHIKREHIDNFI 388 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCBSSCCSSSEEEEECTTHHHHHHHHHHTTCBCEECSSSSEEEEECCTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCEEEcCCCccEEEEEeCCHHHHHHHHHhCCeEEeccCCCCEEEEEEcCCCCHHHHHHHH
Confidence 999999999999999999997765666677888888776433322 3333322 379999999999999999999
Q ss_pred HHHHHHHH
Q 011842 441 NELIENRS 448 (476)
Q Consensus 441 ~~l~~~~~ 448 (476)
++|+++.+
T Consensus 389 ~~l~~~l~ 396 (397)
T 3f9t_A 389 EILNSIKR 396 (397)
T ss_dssp HHHHHHC-
T ss_pred HHHHHhhC
Confidence 99988653
No 11
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.7e-35 Score=309.12 Aligned_cols=370 Identities=18% Similarity=0.175 Sum_probs=280.7
Q ss_pred cccCCCCCcHHHHHHHHHHHHhc-ccccccCCCCcCCcc---hHHHHHHH----HHhhCCCCCCcccCccchhhHHHHHH
Q 011842 72 EFTGDKEAYMAGVLARYRKTLME-RTKHHLGYPYNLDFD---YGALAQLQ----HFSINNLGDPFIESNYGVHSRQFEVG 143 (476)
Q Consensus 72 ~~~~~~~~~~~~il~~~~~~~~~-~~~~~~g~p~~~~~~---~~~l~~~l----~~~~n~~g~~~~~~~~~~~~~~le~~ 143 (476)
.++|+.|.+.+++++.+++.... ... .|.+|.+.+.. ...+.+++ ....+.....+..+ ++..++|++
T Consensus 36 ~~lp~~g~~~~~i~~~l~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~ 111 (497)
T 3mc6_A 36 PQLPSNGIPQDDVIEELNKLNDLIPHT-QWKEGKVSGAVYHGGDDLIHLQTIAYEKYCVANQLHPDVF---PAVRKMESE 111 (497)
T ss_dssp SSCCSSCCCHHHHHHHHHHHHHSSCCC-CGGGTCBSSSCSCCCHHHHHHHHHHHHHTSSCBTTCTTTC---HHHHHHHHH
T ss_pred cCCCCCCCCHHHHHHHHHHHhhhcCCC-CCCCCCEeeecCCCchHHHHHHHHHHHHHhhcCCCCcccC---hHHHHHHHH
Confidence 47899999999999999988763 222 33456655542 13333333 33222222222222 367899999
Q ss_pred HHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhh---CCC---cEEEecCCCchHHHHHHHHcCCeEEEEeCCC-C
Q 011842 144 VLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREV---FPD---GILYASRESHYSVFKAARMYRMECVKVDCLI-S 216 (476)
Q Consensus 144 ~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~---~p~---~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~-~ 216 (476)
+.+|+++++|++.+..++++|+|||+|++.+++++++. .++ +.|+++.++|.++.++++.+|++++.||+++ +
T Consensus 112 ~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~a~~~~~~~~~g~~~~~Vi~~~~~h~~~~~~~~~~G~~~~~v~~~~~~ 191 (497)
T 3mc6_A 112 VVSMVLRMFNAPSDTGCGTTTSGGTESLLLACLSAKMYALHHRGITEPEIIAPVTAHAGFDKAAYYFGMKLRHVELDPTT 191 (497)
T ss_dssp HHHHHHHHTTCCTTTCCEEEESSHHHHHHHHHHHHHHHHHHHSCCSSCEEEEETTSCHHHHHHHHHSCCEEEEECBCTTT
T ss_pred HHHHHHHHhCCCCCCCeEEEcCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCccHHHHHHHHHcCCeEEEEecCccc
Confidence 99999999999833456999999999999999998762 133 7999999999999999999999999999987 7
Q ss_pred CccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCccccccccccc-----CCC
Q 011842 217 GEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKK-----APK 291 (476)
Q Consensus 217 g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~-----~~~ 291 (476)
+.+|+++|+++|.++ +.+|++++++|++|.++|+++|+++|++||+ |+|+|+||+++..++... .+.
T Consensus 192 ~~~d~~~l~~~i~~~---~~~v~~~~p~nptG~~~~l~~i~~la~~~g~-----~livD~a~~~~~~~f~~~~~~~~~~~ 263 (497)
T 3mc6_A 192 YQVDLGKVKKFINKN---TVLLVGSAPNFPHGIADDIEGLGKIAQKYKL-----PLHVDSCLGSFIVSFMEKAGYKNLPL 263 (497)
T ss_dssp CSBCTTTTGGGCCSS---EEEEEEETTCTTTCCCCSCTTTTTHHHHTTC-----CEEEETTTTHHHHGGGTTTTCCSCCC
T ss_pred CcCCHHHHHHHHhhC---CEEEEEECCCCCCCcCCCHHHHHHHHHHhCC-----EEEEECcchhhhhhhhhhhcccCCcc
Confidence 899999999998764 4589999999999999999999999999999 999999999776553221 112
Q ss_pred CCCcc-cccEEEEcCCCCCCCCCCceeEEeehhhhhhh--cCCccccCC--CCCcccCCCCChhHHHHHHHHHHhChhcH
Q 011842 292 VSFKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVL--SSNVEYLAS--RDATIMGSRNGHAPIFLWYTLNRKGYKGF 366 (476)
Q Consensus 292 ~~~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l--~~~~~yl~~--~~~~~~~sr~~~~~l~~~~~l~~~g~~g~ 366 (476)
++... ++|+++.++|||+++|.++|+++++++.+... .....|... ...++.++|.+...+++|++++.++..++
T Consensus 264 ~~~~~~g~d~~~~s~~K~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~aal~~l~~~~~ 343 (497)
T 3mc6_A 264 LDFRVPGVTSISCDTHKYGFAPKGSSVIMYRNSDLRMHQYYVNPAWTGGLYGSPTLAGSRPGAIVVGCWATMVNMGENGY 343 (497)
T ss_dssp CSTTSTTCCEEEEETTTTTCCCSSCEEEECSSHHHHTTTSCCBTTCTTSCBCCSSSCSSCBHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCCcEEEECchhhcCCCCCceeEEecCHHHHhhhhcccccccCCCcCCcCcccCCcchhHHHHHHHHHHHhHHHH
Confidence 44433 48999999999999999999999998764432 222334332 23456677776667789999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhc--CCeEeecCCeeEEEEecCC--cHHHh-----hceeeccc--CCEEEEEEcCCCCHHH
Q 011842 367 QKEVQKCLRNAHYLKDRLLDA--GISAMLNELSSTVVFERPQ--DEEFV-----RRWQLACQ--GNIAHVVVMPNVTIDK 435 (476)
Q Consensus 367 ~~~~~~~~~~a~~l~~~L~~~--g~~~~~~~~~~iv~f~~~~--~~~~~-----~~~~l~~~--~~~lRv~~~~~~T~ed 435 (476)
++++++..++++++.+.|++. |+..+.++..++++|..+. ..++. +++.+... ...+|++++ .+|+++
T Consensus 344 ~~~~~~~~~~~~~l~~~L~~~~~g~~~~~~~~~~~v~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~ri~~~-~~t~e~ 422 (497)
T 3mc6_A 344 IESCQEIVGAAMKFKKYIQENIPDLDIMGNPRYSVISFSSKTLNIHELSDRLSKKGWHFNALQKPVALHMAFT-RLSAHV 422 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCTTCEECSCCCSSEEEEECTTTTHHHHHHHHHTTTCBCEECCSSCCEEEECC-TTTTCT
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCEEEecCCCeeEEEEeCCCCCHHHHHHHHHhCCEEEecCCCCCeEEEEEe-CCCHHH
Confidence 999999999999999999994 5655545667788887653 22222 34444322 346899888 789999
Q ss_pred HHHHHHHHHHHHHHHHhcC
Q 011842 436 LDDFLNELIENRSTWYEDG 454 (476)
Q Consensus 436 id~~~~~l~~~~~~~~~~~ 454 (476)
+|+++++|+++.+++.+..
T Consensus 423 i~~~~~~L~~~l~~~~~~~ 441 (497)
T 3mc6_A 423 VDEICDILRTTVQELKSES 441 (497)
T ss_dssp HHHHHHHHHHHHHHHTCC-
T ss_pred HHHHHHHHHHHHHHHHhCc
Confidence 9999999999998876553
No 12
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=100.00 E-value=4.3e-34 Score=302.41 Aligned_cols=371 Identities=18% Similarity=0.182 Sum_probs=279.3
Q ss_pred ccCCCCCcHHHHHHHHHHHHhcccccccCCCCcCCcc-------hHHHHHHHHHhhCCCCCCcccCccchhhHHHHHHHH
Q 011842 73 FTGDKEAYMAGVLARYRKTLMERTKHHLGYPYNLDFD-------YGALAQLQHFSINNLGDPFIESNYGVHSRQFEVGVL 145 (476)
Q Consensus 73 ~~~~~~~~~~~il~~~~~~~~~~~~~~~g~p~~~~~~-------~~~l~~~l~~~~n~~g~~~~~~~~~~~~~~le~~~~ 145 (476)
.+|+.|.+.+++++++++.+..+.. .|.+|.+.++. ...+.+.+....+.....+..++ ...++|++++
T Consensus 70 ~lp~~g~~~~~i~~~l~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p---~~~~le~~l~ 145 (514)
T 3mad_A 70 RLPRAGLPRAEILAEIAAMGAAESP-AWRDGYASGAVYHGDEHHIAFLNEVYALQSQSNPLHPDLWP---STAKFEAEVV 145 (514)
T ss_dssp SCCSSCCCHHHHHHHHHHHHHHHHH-HHHTTCBSSSCSCCCHHHHHHHHHHHHHHTTCCTTCTTTCH---HHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHhccCC-CCCCCceEEEecCCCCCHHHHHHHHHHHHhhcCCcccccCh---HHHHHHHHHH
Confidence 6789999999999999988655433 23344444421 34555666555554333333332 5679999999
Q ss_pred HHHHHHcCCCC--CcccEEEcCCchhHHHHHHHHHHhhC------CCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCC
Q 011842 146 DWFARLWELEN--NEYWGYITNCGTEGNLHGILVGREVF------PDGILYASRESHYSVFKAARMYRMECVKVDCLISG 217 (476)
Q Consensus 146 ~~la~l~g~~~--~~~~g~~t~ggt~An~~al~aa~~~~------p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g 217 (476)
+|+++++|++. +...+++|+|||+||..++++++... +++.|+++.++|.++.++++.+|++++.||+++++
T Consensus 146 ~~la~~~g~~~~~~~v~~~~t~ggt~a~~~al~a~~~~g~~~~g~~~d~Vi~~~~~~~~~~~~~~~~G~~v~~v~~~~~~ 225 (514)
T 3mad_A 146 AMTAHMLGGDAAGGTVCGTVTSGGTESLLLAMKTYRDWARATKGITAPEAVVPVSAHAAFDKAAQYFGIKLVRTPLDADY 225 (514)
T ss_dssp HHHHHHTTGGGGTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHCCSSCEEEEETTSCTHHHHHHHHHTCEEEEECBCTTS
T ss_pred HHHHHHcCCCCccCCcceEEcCcHHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCccchHHHHHHHHcCCeeEEeeeCCCC
Confidence 99999999984 23345999999999999999988632 12899999999999999999999999999999899
Q ss_pred ccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCccccccccccc----CCCCC
Q 011842 218 EIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKK----APKVS 293 (476)
Q Consensus 218 ~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~----~~~~~ 293 (476)
.+|+++|+++|.+++ .+|++++++|++|.++|+++|.++|++||+ |+|+|++|+++..++... .+.++
T Consensus 226 ~~d~~~Le~~i~~~~---~~v~~~~~~nptG~~~~l~~i~~la~~~~i-----~livDea~~~~~~~~~~~~g~~~~~~~ 297 (514)
T 3mad_A 226 RADVAAMREAITPNT---VVVAGSAPGYPHGVVDPIPEIAALAAEHGI-----GCHVDACLGGFILPWAERLGYPVPPFD 297 (514)
T ss_dssp CBCHHHHHHHCCTTE---EEEEEETTCTTTCCCCCHHHHHHHHHHHTC-----EEEEECTTTTTTHHHHHHTTCCCCCCS
T ss_pred CCCHHHHHHHhccCC---EEEEEeCCCCCCccccCHHHHHHHHHHhCC-----eEEEecccccccchhHHhcCCCCCccc
Confidence 999999999997644 588899999999999999999999999999 999999999876642111 11244
Q ss_pred Ccc-cccEEEEcCCCCCCCCCCceeEEeehhhhhhhc--CCccccCC--CCCcccCCCCChhHHHHHHHHHHhChhcHHH
Q 011842 294 FKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLS--SNVEYLAS--RDATIMGSRNGHAPIFLWYTLNRKGYKGFQK 368 (476)
Q Consensus 294 ~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~--~~~~yl~~--~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~ 368 (476)
... ++|++++++|||+++|.++|+++++++...... ....|..+ ...++.+++.+...+++|++++.++..++++
T Consensus 298 ~~~~g~d~~~~s~~K~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~~~~~~~a~~aal~~l~~~~~~~ 377 (514)
T 3mad_A 298 FRLEGVTSVSADTHKYGYGAKGTSVILYRRPDLLHYQYFIAADWPGGLYFSPTFAGSRPGALSATAWAAMLSLGEEGYLD 377 (514)
T ss_dssp TTSTTCCEEEECTTTTTCCCSSCEEEEESSHHHHTTTCEEESSCTTCSEEESSSCSSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCcEEEECchhccCCCCCeEEEEEeCHHHhccccccccccCCCcccCCccCCCCchHHHHHHHHHHHHHhHHHHHH
Confidence 333 489999999999999999999999987543321 11122211 1234567887777789999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecCC--cHHHh-----hceeecc--cCCEEEEEEc-CCCCHHHHHH
Q 011842 369 EVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERPQ--DEEFV-----RRWQLAC--QGNIAHVVVM-PNVTIDKLDD 438 (476)
Q Consensus 369 ~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~--~~~~~-----~~~~l~~--~~~~lRv~~~-~~~T~edid~ 438 (476)
++++..++++++.+.|++.+...+..+..+++.|..+. ..++. +++.++. ..+.+|++++ .++++++|++
T Consensus 378 ~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~Gi~v~g~~~~~~~Ri~~~~~~~~~e~i~~ 457 (514)
T 3mad_A 378 ATRRILQAADRLKAGVRAIPSLKILGDPLWVIAVASDELNIYQVMEEMAGRGWRLNGLHRPPAFHVALTLRHTEPGVVDR 457 (514)
T ss_dssp HHHHHHHHHHHHHHHHHTSTTCEESSCCSSEEEEECSSSCHHHHHHHHHTTTCBCEEETTTTEEEEECCGGGGSTTHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCeEEeCCCeEEEEEeCCCCCHHHHHHHHHhcCCEeccCCCCCeEEEEEecCCCCHHHHHH
Confidence 99999999999999999974334444445577776542 22222 3444422 1467999886 6667899999
Q ss_pred HHHHHHHHHHHHHhcCC
Q 011842 439 FLNELIENRSTWYEDGK 455 (476)
Q Consensus 439 ~~~~l~~~~~~~~~~~~ 455 (476)
++++|+++.+++.++..
T Consensus 458 ~l~~L~~~l~~~~~~~~ 474 (514)
T 3mad_A 458 FLADLQDAVAQVRAHPE 474 (514)
T ss_dssp HHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHhCCC
Confidence 99999999988876554
No 13
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=100.00 E-value=8.1e-33 Score=288.44 Aligned_cols=351 Identities=14% Similarity=0.077 Sum_probs=247.5
Q ss_pred ccCCCCCcHHHHHHHHHHHHhcccccccCCCCcCCcchHHHHHHHHH----hhCCCC--CCcccCc----cchhhHHHHH
Q 011842 73 FTGDKEAYMAGVLARYRKTLMERTKHHLGYPYNLDFDYGALAQLQHF----SINNLG--DPFIESN----YGVHSRQFEV 142 (476)
Q Consensus 73 ~~~~~~~~~~~il~~~~~~~~~~~~~~~g~p~~~~~~~~~l~~~l~~----~~n~~g--~~~~~~~----~~~~~~~le~ 142 (476)
++|+.|.+.+++.....+........|+.+-.....+...+..+... ..+..+ ..+...+ ......++++
T Consensus 57 ~lp~~g~~~~~i~~~~~~~~~~~~~~yld~aa~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (456)
T 2z67_A 57 KIPENGIDDEKIKLFLKFLSMMDTDKDPKSVRIGEREARTYSKIHEELSSGFCHGIGRSGNLVDPQPKASGASIMYALTN 136 (456)
T ss_dssp SCCSSCCCHHHHHHHHHHHHTTBGGGCTTCEECSSCCCCCSCHHHHHHTTTCTTCBSBTTBTTSCCTTBHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHhccccccccccccccccccccccccCccccccCCCccHHHHHHhhCcccccCcHHHHHHH
Confidence 68889999888887777665443333332111111111111122211 111111 1111111 1113678999
Q ss_pred HHHHHHHHHcCCCCCcccEEEcCCch-hHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeC---CCCCc
Q 011842 143 GVLDWFARLWELENNEYWGYITNCGT-EGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDC---LISGE 218 (476)
Q Consensus 143 ~~~~~la~l~g~~~~~~~g~~t~ggt-~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~---~~~g~ 218 (476)
++++++++++|++.+ +++|+||| .+|+.++.+++...++++|+++..+|+|+.++++..|++++.++. ++++.
T Consensus 137 ~~~~~la~~~g~~~~---~~~t~g~te~a~~~al~~~~~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~ 213 (456)
T 2z67_A 137 KILESFFKQLGLNVH---AIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPIKAVSFVGMNMRLVETVLDGDRVY 213 (456)
T ss_dssp HHHHHHHHHTTCCCE---EEEESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHTTCEEEEECCEEETTEEE
T ss_pred HHHHHHHHHcCCCCC---EEEeCcHHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHHHHcCCCceEEEEeccCCCCC
Confidence 999999999999752 99999999 577778777665336778888889999999999999999999887 66789
Q ss_pred cCHHHHHHHH-Hc--CCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCccccccccccc-CCCCCC
Q 011842 219 IDCADFKAKL-LQ--NKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKK-APKVSF 294 (476)
Q Consensus 219 ~D~~~Le~~l-~~--~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~-~~~~~~ 294 (476)
+|+++|+++| ++ ++ ++.+|+++.++|++|.++|+++|+++|++||+ |+|||+||++...+.... ...+..
T Consensus 214 ~d~~~l~~~i~~~~~~~-~~~~vv~~~~nn~tG~i~~l~~I~~la~~~g~-----~v~vD~A~~~~~~g~~~~~~~~~~~ 287 (456)
T 2z67_A 214 VPVEDIENAIKKEIELG-NRPCVLSTLTFFPPRNSDDIVEIAKICENYDI-----PHIINGAYAIQNNYYLEKLKKAFKY 287 (456)
T ss_dssp CCHHHHHHHHHHHHHTT-CCEEEEEESSCCTTBCCCCHHHHHHHHHHHTC-----CEEEECTTTTTCHHHHHHHHHHHTS
T ss_pred cCHHHHHHHHHHHhhCC-CeEEEEEeCCCCCCCCcCCHHHHHHHHHHcCC-----cEEEECcchHHHHHhhHHHHHhhCC
Confidence 9999999999 43 23 45677788899999999999999999999999 999999998654421110 000111
Q ss_pred cccccEEEEcCCCCCCCCCCceeEEeeh-hhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHH
Q 011842 295 KKPIGSVSVSGHKFVGCPMPCGVQITRM-EHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKC 373 (476)
Q Consensus 295 ~~~~Dsi~~s~hK~l~~p~~~G~l~~~~-~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~ 373 (476)
.+|++++|+|||+++|+++|++++++ ++++.+. +.|. +.+.+...+.+|+++..++.++++++.++.
T Consensus 288 --~~D~~~~s~hK~~~~p~g~G~l~~~~~~~~~~l~--~~~~--------g~~~~~~~~~~~aal~~l~~~~~~~~~~~~ 355 (456)
T 2z67_A 288 --RVDAVVSSSDKNLLTPIGGGLVYSTDAEFIKEIS--LSYP--------GRASATPVVNTLVSLLSMGSKNYLELVKNQ 355 (456)
T ss_dssp --CCSEEEEEHHHHHCCCSSCEEEEESCHHHHHHHH--TTSC--------SCBCSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --CCCEEEEcCCCCcCCCCCeEEEEEcCHHHHhhcC--cCCC--------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 48999999999999999999999964 4555552 3343 233445578899999999989999999999
Q ss_pred HHHHHHHHHHHHhc----CCeEeecCCeeEEEEec--CCc-HHHhh-----c---eeec------------c-cCCEEEE
Q 011842 374 LRNAHYLKDRLLDA----GISAMLNELSSTVVFER--PQD-EEFVR-----R---WQLA------------C-QGNIAHV 425 (476)
Q Consensus 374 ~~~a~~l~~~L~~~----g~~~~~~~~~~iv~f~~--~~~-~~~~~-----~---~~l~------------~-~~~~lRv 425 (476)
.+++++|.+.|++. |.. +.++. ++++|.. +.. .++.+ + ..+. . ..+++|+
T Consensus 356 ~~~~~~l~~~L~~~~~~~g~~-v~~~~-~~v~~~~~~~~~~~~l~~~L~~~gi~~~rv~~~~g~f~G~~~~~~~~~~vr~ 433 (456)
T 2z67_A 356 KNSKKLLDELLNDLSKKTGGK-FLDVE-SPIASCISVNSDPVEIAAKLYNLRVTGPRGIKKTDHFGNCYLGTYTHDYIVM 433 (456)
T ss_dssp HHHHHHHHHHHHHHHHHSSCC-BCCCC-CSSEEEEECSSCHHHHHHHHHHTTEESCEEECTTCHHHHTCSSCCSCCEEEE
T ss_pred HHHHHHHHHHHHhcccccCCE-ecCCC-CeEEEEEecccHHHHHHHHHHHcCCCcceEEeecCccccccccccCcchhhh
Confidence 99999999999987 643 44444 7777776 432 22221 1 1232 1 1357899
Q ss_pred EEcCCCCHHHHHHHHHHHHHH
Q 011842 426 VVMPNVTIDKLDDFLNELIEN 446 (476)
Q Consensus 426 ~~~~~~T~edid~~~~~l~~~ 446 (476)
+++.++|++|||+++++|+++
T Consensus 434 s~~~~~t~eeid~~l~~L~~~ 454 (456)
T 2z67_A 434 NAAIGVRTEDIVNSVSKLEKI 454 (456)
T ss_dssp ECCTTCCHHHHHHHHHHHHTC
T ss_pred hhhcCCCHHHHHHHHHHHHHH
Confidence 999999999999999999865
No 14
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.97 E-value=1.8e-30 Score=266.15 Aligned_cols=354 Identities=12% Similarity=0.016 Sum_probs=243.9
Q ss_pred ccCCCCCcHHHHHHHHHHHHhccccccc-------------C---CCCcCCcch--HHHHHHHHHhhCCCCCCcccCccc
Q 011842 73 FTGDKEAYMAGVLARYRKTLMERTKHHL-------------G---YPYNLDFDY--GALAQLQHFSINNLGDPFIESNYG 134 (476)
Q Consensus 73 ~~~~~~~~~~~il~~~~~~~~~~~~~~~-------------g---~p~~~~~~~--~~l~~~l~~~~n~~g~~~~~~~~~ 134 (476)
.+|++|.+-++|...+.+.-....++.. | -|++++|.. +..++++.. |. .+..++
T Consensus 22 ~~p~~g~~~~~i~~~l~~~~~~d~~~~~~~~~~geregrv~~~~~~~r~~g~~hg~~~~~d~l~~---~~--~~~~~~-- 94 (450)
T 3bc8_A 22 KCPEDGWDESTLELFLHELAVMDSNNFLGNCGVGEREGRVASALVARRHYRFIHGIGRSGDISAV---QP--KAAGSS-- 94 (450)
T ss_dssp CCCSSCCCHHHHHHHHHHHHHTBGGGCTTCCCCSSCCCCCSCHHHHHHTTTCCSCBCC----------CC--SBHHHH--
T ss_pred cCCccCCCHHHHHHHHHHHhhCCCCccccccccCcccceEecccccCCccceecchhHHHHHHHh---Cc--cccCCc--
Confidence 6899999999999888876544333211 1 133344432 233455544 11 222222
Q ss_pred hhhHHHHHHHHHHHHHHcCCCCCcccEEEcCCch-hHHHHHHHHHHhhC-CCcEEEecCCCchHHHHHHHHcCCeEEEEe
Q 011842 135 VHSRQFEVGVLDWFARLWELENNEYWGYITNCGT-EGNLHGILVGREVF-PDGILYASRESHYSVFKAARMYRMECVKVD 212 (476)
Q Consensus 135 ~~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt-~An~~al~aa~~~~-p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~ 212 (476)
....+|+.+..|+.+++|++.. +.+++++|+| +++.+++.++|... +++.|++++..|.|+.+++.++|++++.|+
T Consensus 95 -~~~~~e~~~~~~~~~~lGlp~~-~~~~lV~GaT~~~~a~~L~aar~~~~~~~~viv~r~aHkSv~kAl~l~Gl~p~~v~ 172 (450)
T 3bc8_A 95 -LLNKITNSLVLNVIKLAGVHSV-ASCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMVTAGFEPVVIE 172 (450)
T ss_dssp -HHHHHHHHHHHHHHHHHTCTTC-CEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEEC
T ss_pred -HHHHHHHHHHHHHHHhCCCCCC-ceEEEECCHHHHHHHHHHHHcchhhcCCCEEEEECCcHHHHHHHHHHcCCeeEEEE
Confidence 4668999999999999999853 4579999998 66777777777643 367889899999999999999999988886
Q ss_pred C---CCCCccCHHHHHHHHHcCC-CCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCccccccccccc
Q 011842 213 C---LISGEIDCADFKAKLLQNK-DKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKK 288 (476)
Q Consensus 213 ~---~~~g~~D~~~Le~~l~~~~-~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~ 288 (476)
. ++.+.||++.|+++|++++ +.+.+|+.+.+++.+|.++||++|+++|++||+ |+|||+|||+.... ..+
T Consensus 173 ~~~~~~~~~id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~ddl~~Ia~ia~~~gi-----~l~VD~A~G~~~~~-~~~ 246 (450)
T 3bc8_A 173 NVLEGDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDRLEELAVICANYDI-----PHVVNNAYGLQSSK-CMH 246 (450)
T ss_dssp CEEETTEEECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCCHHHHHHHHHHHTC-----CEEEECTTTTTCHH-HHH
T ss_pred eeecCccCCcCHHHHHHHHHhcCCCCEEEEEEECCcCCCceecCHHHHHHHHHHCCC-----eEEEECCCchhhhh-hHh
Confidence 6 5568999999999998764 345666666556667799999999999999999 99999999975432 111
Q ss_pred CCCCCCc--ccccEEEEcCCCCCCCCCCceeEEeehh-hhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhc
Q 011842 289 APKVSFK--KPIGSVSVSGHKFVGCPMPCGVQITRME-HINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKG 365 (476)
Q Consensus 289 ~~~~~~~--~~~Dsi~~s~hK~l~~p~~~G~l~~~~~-~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g 365 (476)
.+. ... +++|+++.|+|||+++|.++++++++++ .++.+. ..|. +.....+++.+|..+..+|.++
T Consensus 247 l~~-~a~~~~~AD~~v~S~HK~l~a~~~~~~l~~rd~~~~~~~~--~~~~--------g~~s~SpsL~l~~~l~~~G~~g 315 (450)
T 3bc8_A 247 LIQ-QGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNEPFIQDIS--KMYP--------GRASASPSLDVLITLLSLGCSG 315 (450)
T ss_dssp HHH-HHHHHSCCCEEEEEHHHHHSCCSSCEEEEESCHHHHHHHH--HHSC--------SCBCSHHHHHHHHHHHHHHHHH
T ss_pred HHH-HHhcccCCCEEEECCccCCCchhccEEEEecCHHHHHHHH--HHhh--------cCCcccHHHHHHHHHHHHHHHH
Confidence 100 111 3599999999999999999999999765 344332 2342 2222345799999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcC----CeEeecCC---eeEEEEec-----CCcH-HH-----h---hceeec-------
Q 011842 366 FQKEVQKCLRNAHYLKDRLLDAG----ISAMLNEL---SSTVVFER-----PQDE-EF-----V---RRWQLA------- 417 (476)
Q Consensus 366 ~~~~~~~~~~~a~~l~~~L~~~g----~~~~~~~~---~~iv~f~~-----~~~~-~~-----~---~~~~l~------- 417 (476)
+++.+++..+++++|+++|++.+ ..++..+. +..+.+.. ..+. .+ . .++.+.
T Consensus 316 ~~~~i~~~~~~a~~l~~~l~~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~~~~D~tkl~i~~~~~g~sG~~v~~~~~~~~ 395 (450)
T 3bc8_A 316 YRKLLKERKEMFVYLSTQLKKLAEAHNERLLQTPHNPISLAMTLKTIDGHHDKAVTQLGSMLFTRQVSGARAVPLGNVQT 395 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCCBCCCTTCSSEEEEECTTTSSSSSCHHHHHHHHHHHTTCCSCEEECSCCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHhcCceecCCccCCCcceeecccccccccCCCceeEEEecCCCCccceeeecccccc
Confidence 99999999999999999998754 43332221 21121111 1111 11 0 111111
Q ss_pred ---------------ccCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHh
Q 011842 418 ---------------CQGNIAHVVVMPNVTIDKLDDFLNELIENRSTWYE 452 (476)
Q Consensus 418 ---------------~~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~~ 452 (476)
.....+-+.+++..|++|+++|+++|+++.+++.+
T Consensus 396 ~~~~~l~~~gi~~E~~~~~~i~~~~sig~~~~di~~l~~~L~~~~~~~~~ 445 (450)
T 3bc8_A 396 VSGHTFRGFMSHADNYPCAYLNAAAAIGMKMQDVDLFIKRLDKCLNIVRK 445 (450)
T ss_dssp ETTEEEETTTTTSSCCSSCEEEEECCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHcCCeeecCCCCcEEEEecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 11356677788999999999999999998766543
No 15
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.97 E-value=3.9e-28 Score=245.84 Aligned_cols=300 Identities=13% Similarity=0.135 Sum_probs=227.6
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchH--HHHHHHHcCCeEEEEeC
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYS--VFKAARMYRMECVKVDC 213 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S--~~~~~~~~G~~v~~v~~ 213 (476)
...++++++++++++++|.+ +...+++|+|||+|+..++.++.. |++.|++++++|++ +...++..|++++.+++
T Consensus 50 ~~~~~~~~~~~~la~~~g~~-~~~~v~~~~g~t~a~~~~~~~l~~--~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~ 126 (386)
T 2dr1_A 50 EYRKVHMDTVERLREFLEVE-KGEVLLVPSSGTGIMEASIRNGVS--KGGKVLVTIIGAFGKRYKEVVESNGRKAVVLEY 126 (386)
T ss_dssp HHHHHHHHHHHHHHHHHTCS-SSEEEEESSCHHHHHHHHHHHHSC--TTCEEEEEESSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHhCCC-CCcEEEEeCChHHHHHHHHHHhhc--CCCeEEEEcCCchhHHHHHHHHHhCCceEEEec
Confidence 34689999999999999997 334589999999999999988754 89999999999998 88899999999999999
Q ss_pred CCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCC
Q 011842 214 LISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVS 293 (476)
Q Consensus 214 ~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~ 293 (476)
+.++.+|+++|++++.+.. ++.+|++++++|++|.+.|+++|.++|++||+ ++|+|++|+.+..+ ++
T Consensus 127 ~~~~~~d~~~l~~~l~~~~-~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~-----~li~D~a~~~~~~~-------~~ 193 (386)
T 2dr1_A 127 EPGKAVKPEDLDDALRKNP-DVEAVTITYNETSTGVLNPLPELAKVAKEHDK-----LVFVDAVSAMGGAD-------IK 193 (386)
T ss_dssp CTTCCCCHHHHHHHHHHCT-TCCEEEEESEETTTTEECCHHHHHHHHHHTTC-----EEEEECTTTBTTBC-------CC
T ss_pred CCCCCCCHHHHHHHHhcCC-CCcEEEEEeecCCcchhCCHHHHHHHHHHcCC-----eEEEEccccccCcc-------cc
Confidence 8888899999999996421 23478888999999999999999999999999 99999999865543 12
Q ss_pred Ccc-cccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCC---ccccC------CC--CCcccCCCCChhHHHHHHHHHHh
Q 011842 294 FKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSN---VEYLA------SR--DATIMGSRNGHAPIFLWYTLNRK 361 (476)
Q Consensus 294 ~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~---~~yl~------~~--~~~~~~sr~~~~~l~~~~~l~~~ 361 (476)
... .+|+++.|+||++++|.++|++++++++++.+... ..|+. .. .....++.+......++.+++.+
T Consensus 194 ~~~~~~di~~~s~sK~~~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~ 273 (386)
T 2dr1_A 194 FDKWGLDVVFSSSQKAFGVPPGLAIGAFSERFLEIAEKMPERGWYFDIPLYVKYLKEKESTPSTPPMPQVFGINVALRII 273 (386)
T ss_dssp TTTTTCSEEEEETTSTTCCCSSCEEEEECHHHHHHHTTCTTCCSTTCHHHHHHHHHHHSSCSSCCCHHHHHHHHHHHHHH
T ss_pred ccccCCcEEEEeccccccCCCceEEEEECHHHHHHHhcCCCCceEEeHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHH
Confidence 222 37999999999999888899999998876655211 01110 00 00112333333344455566665
Q ss_pred Chh-cHHHHHHHHHHHHHHHHHHHHhcCCeEeecC---CeeEEEEecCC---cHHHh-----hceeecc-----cCCEEE
Q 011842 362 GYK-GFQKEVQKCLRNAHYLKDRLLDAGISAMLNE---LSSTVVFERPQ---DEEFV-----RRWQLAC-----QGNIAH 424 (476)
Q Consensus 362 g~~-g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~---~~~iv~f~~~~---~~~~~-----~~~~l~~-----~~~~lR 424 (476)
... +++++.++..++++++.+.|++.|+....++ ..+++.|..+. ..++. +++.+.. ..+.+|
T Consensus 274 ~~~g~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~iR 353 (386)
T 2dr1_A 274 EKMGGKEKWLEMYEKRAKMVREGVREIGLDILAEPGHESPTITAVLTPPGIKGDEVYEAMRKRGFELAKGYGSVKEKTFR 353 (386)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHHHHHTTCCBSSCTTCBCSSEEEEECCTTCCHHHHHHHHHHTTEECEECCGGGTTTEEE
T ss_pred HHhcCHHHHHHHHHHHHHHHHHHHHHcCCeeCcCccccCCceEEEEcCCCCCHHHHHHHHHHCCeEEecCccccCCCEEE
Confidence 444 6889999999999999999999876544332 25677777652 22332 2333322 347899
Q ss_pred EEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 011842 425 VVVMPNVTIDKLDDFLNELIENRSTWY 451 (476)
Q Consensus 425 v~~~~~~T~edid~~~~~l~~~~~~~~ 451 (476)
++++..+|++|+++++++|+++.+++.
T Consensus 354 i~~~~~~~~~~i~~~~~~l~~~~~~~~ 380 (386)
T 2dr1_A 354 IGHMGYMKFEDIQEMLDNLREVINELK 380 (386)
T ss_dssp EECCSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 999999999999999999999887753
No 16
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.97 E-value=9.4e-29 Score=250.00 Aligned_cols=299 Identities=11% Similarity=0.044 Sum_probs=228.1
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchH--HHHHHHHcCCeEEEEeC
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYS--VFKAARMYRMECVKVDC 213 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S--~~~~~~~~G~~v~~v~~ 213 (476)
...++..++++++++++|.+.+..++++|+|||+|+. ++.++.. |++.|++++++|++ +...++..|++++.+|.
T Consensus 32 ~~~~~~~~~~~~la~~~~~~~~~~~v~~~~g~t~al~-~~~~~~~--~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~ 108 (384)
T 3zrp_A 32 EFVEALAYSLKGLRYVMGASKNYQPLIIPGGGTSAME-SVTSLLK--PNDKILVVSNGVFGDRWEQIFKRYPVNVKVLRP 108 (384)
T ss_dssp HHHHHHHHHHHHHHHHHTCCTTSEEEEEESCHHHHHH-HGGGGCC--TTCEEEEECSSHHHHHHHHHHTTSSCEEEEECC
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCcEEEEcCCcHHHHH-HHHhhcC--CCCEEEEecCCcchHHHHHHHHHcCCcEEEecC
Confidence 3467888999999999999863356999999999999 8776644 89999999999977 66777888999999999
Q ss_pred CCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCC
Q 011842 214 LISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVS 293 (476)
Q Consensus 214 ~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~ 293 (476)
+.++.+|+++|++++.+.. +.+|++++++|++|.+.|+++|.++|++||+ ++|+|++|+.+..+ .+
T Consensus 109 ~~~~~~d~~~l~~~i~~~~--~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~-----~li~D~a~~~~~~~-------~~ 174 (384)
T 3zrp_A 109 SPGDYVKPGEVEEEVRKSE--YKLVALTHVETSTGVREPVKDVINKIRKYVE-----LIVVDGVSSVGAEE-------VK 174 (384)
T ss_dssp STTCCCCHHHHHHHHHHSC--EEEEEEESEETTTTEECCHHHHHHHHGGGEE-----EEEEECTTTTTTSC-------CC
T ss_pred CCCCCCCHHHHHHHHHhCC--CcEEEEeCCCCCCceECcHHHHHHHHHhcCC-----EEEEECcccccCcc-------cc
Confidence 9889999999999998732 3488888999999999999999999999999 99999999865443 22
Q ss_pred Ccc-cccEEEEcCCCCCCCCCCceeEEeehhhhhhh-cC---CccccCCC------------CCcccCCCCChhHHHHHH
Q 011842 294 FKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVL-SS---NVEYLASR------------DATIMGSRNGHAPIFLWY 356 (476)
Q Consensus 294 ~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l-~~---~~~yl~~~------------~~~~~~sr~~~~~l~~~~ 356 (476)
... .+|+++.++||++++|.++|++++++++++.+ .. ...|+... .....++.+......+++
T Consensus 175 ~~~~~~d~~~~s~~K~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~ 254 (384)
T 3zrp_A 175 AEEWNVDVYLTASQKALGSAAGLGLLLLSPKALSILDSQNSIAGYYLDLRNWLPVMRGAEEGKAAYFATPPVHVILQLAE 254 (384)
T ss_dssp TTTTTCSEEEEETTSTTCCCSSEEEEEECHHHHHHHHHCCCSCCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHH
T ss_pred ccccCCCEEEecCcccccCCCceEEEEECHHHHHHhcCCCCCCcccccHHHHHHHHHhhcccCCCcCCCCCHHHHHHHHH
Confidence 222 38999999999998889999999999876655 11 11111000 011113444344455666
Q ss_pred HHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecC----CeeEEEEecCC--cHHHhh-----ceeecccC----C
Q 011842 357 TLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNE----LSSTVVFERPQ--DEEFVR-----RWQLACQG----N 421 (476)
Q Consensus 357 ~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~----~~~iv~f~~~~--~~~~~~-----~~~l~~~~----~ 421 (476)
++..+...+++++.++..++++++.+.|++.|+....++ ..+++.|..+. ..++.+ ++.+.... +
T Consensus 255 al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~ 334 (384)
T 3zrp_A 255 AFRLIEKEGIENRIKRHTMVASAIRAGLEALGLEIVARRPESYSNTVTGVILKVADPQKVLAGTVNEGVEFAPGVHPAFK 334 (384)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSCSSGGGBCSSEEEEECSSSCHHHHHHHHHTTTCCCEECCCTTCC
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHHHHCCCeEccCcccccCccEEEEECCCCCHHHHHHHHHHCCEEEecCCCCCcC
Confidence 777766677899999999999999999999876544443 24566677663 233322 23333333 6
Q ss_pred EEEEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 011842 422 IAHVVVMPNVTIDKLDDFLNELIENRSTWY 451 (476)
Q Consensus 422 ~lRv~~~~~~T~edid~~~~~l~~~~~~~~ 451 (476)
.+|+++...+|++||++++++|+++.+++.
T Consensus 335 ~iRi~~~~~~~~e~i~~~~~~l~~~l~~~~ 364 (384)
T 3zrp_A 335 YFRIGHMGWVTPNDAIIAISVIERTLRKLG 364 (384)
T ss_dssp EEEEECCSSCCHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEeccccCCHHHHHHHHHHHHHHHHHcC
Confidence 899999999999999999999999988764
No 17
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.96 E-value=1.5e-27 Score=245.02 Aligned_cols=298 Identities=13% Similarity=0.102 Sum_probs=217.2
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHh--hCCCcEEEecCCCchHHHHHHHHc---CCeEEE
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGRE--VFPDGILYASRESHYSVFKAARMY---RMECVK 210 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~--~~p~~~Vl~s~~~H~S~~~~~~~~---G~~v~~ 210 (476)
...+...++++++++++|.+++ .+++|+|||+|+..++.++++ ..|++.|+++.++|.++..++..+ |++++.
T Consensus 65 ~~~~~~~~l~~~la~~~~~~~~--~v~~~~ggt~a~~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~ 142 (423)
T 3lvm_A 65 QAEEAVDIARNQIADLVGADPR--EIVFTSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTY 142 (423)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGG--GEEEESSHHHHHHHHHHHHHHHHTTTCCEEEEETTSCHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCCC--eEEEeCChHHHHHHHHHHHHHhhccCCCEEEECCccchHHHHHHHHHHHcCCEEEE
Confidence 4457788899999999999743 599999999999999988764 236899999999999998877555 999999
Q ss_pred EeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCC
Q 011842 211 VDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAP 290 (476)
Q Consensus 211 v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~ 290 (476)
+|.++++.+|+++|+++|.+++ .+|++++++|++|.+.|+++|.++|++||+ ++++|++|+.+..+
T Consensus 143 v~~~~~~~~d~~~l~~~i~~~~---~~v~~~~~~nptG~~~~l~~i~~l~~~~~~-----~li~Dea~~~~~~~------ 208 (423)
T 3lvm_A 143 LAPQRNGIIDLKELEAAMRDDT---ILVSIMHVNNEIGVVQDIAAIGEMCRARGI-----IYHVDATQSVGKLP------ 208 (423)
T ss_dssp ECCCTTSCCCHHHHHHHCCTTE---EEEECCSBCTTTCBBCCHHHHHHHHHHHTC-----EEEEECTTTTTTSC------
T ss_pred eccCCCCccCHHHHHHhcCCCc---EEEEEeCCCCCCccccCHHHHHHHHHHcCC-----EEEEEhhhhcCCCC------
Confidence 9999899999999999997644 588888999999999999999999999999 99999999875543
Q ss_pred CCCCcc-cccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHH
Q 011842 291 KVSFKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKE 369 (476)
Q Consensus 291 ~~~~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~ 369 (476)
++... .+|+++.++||+++ |.++|+++++++....+...............++.+......+.+++..+. ..+++.
T Consensus 209 -~~~~~~~~di~~~s~sK~~g-~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~-~~~~~~ 285 (423)
T 3lvm_A 209 -IDLSQLKVDLMSFSGHKIYG-PKGIGALYVRRKPRVRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRIAK-EEMATE 285 (423)
T ss_dssp -CCTTTSCCSEEEEESTTTTS-CSSCEEEEECBTTBCCCCCSSCSSCTTTTTCCSCCCHHHHHHHHHHHHHHH-HHHHHH
T ss_pred -cChhhcCCCEEEechHHhcC-CCCeEEEEEeccccCCCCccccCCcccccccCCCCCHHHHHHHHHHHHHHH-HHHHHH
Confidence 22222 37999999999655 778999999987654432211000000011122333223333444555442 337888
Q ss_pred HHHHHHHHHHHHHHHHhc-CCeEeecCC---eeEEEEecCC--cHHHh---hceeeccc---------------------
Q 011842 370 VQKCLRNAHYLKDRLLDA-GISAMLNEL---SSTVVFERPQ--DEEFV---RRWQLACQ--------------------- 419 (476)
Q Consensus 370 ~~~~~~~a~~l~~~L~~~-g~~~~~~~~---~~iv~f~~~~--~~~~~---~~~~l~~~--------------------- 419 (476)
.++..++++++.+.|++. ++....++. .+++.|..+. ..++. .++.+...
T Consensus 286 ~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~i~v~~g~~~~~~~~~~~~~~~~~g~~~ 365 (423)
T 3lvm_A 286 MERLRGLRNRLWNGIKDIEEVYLNGDLEHGAPNILNVSFNYVEGESLIMALKDLAVSSGSACTSASLEPSYVLRALGLND 365 (423)
T ss_dssp HHHHHHHHHHHHHHHTTSTTEEEESCSTTBCTTEEEEEETTSCHHHHHHHTTTEECBCCCC-----CCCCHHHHHHTCCH
T ss_pred HHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCeEEEEeCCCCHHHHHHHHhhheeccCccccCCCccccHHHHHhCCCc
Confidence 999999999999999888 443333332 2456665542 22222 22222211
Q ss_pred ---CCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHh
Q 011842 420 ---GNIAHVVVMPNVTIDKLDDFLNELIENRSTWYE 452 (476)
Q Consensus 420 ---~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~~ 452 (476)
.+.+|++++..+|++||++++++|+++.+++.+
T Consensus 366 ~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~~~~~~~ 401 (423)
T 3lvm_A 366 ELAHSSIRFSLGRFTTEEEIDYTIELVRKSIGRLRD 401 (423)
T ss_dssp HHHHTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred cccCceEEEECCCCCCHHHHHHHHHHHHHHHHHhhc
Confidence 378999999999999999999999999887653
No 18
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.96 E-value=5.9e-28 Score=246.78 Aligned_cols=297 Identities=10% Similarity=0.048 Sum_probs=228.1
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchH--HHHHHHHcCCeEEEEeC
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYS--VFKAARMYRMECVKVDC 213 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S--~~~~~~~~G~~v~~v~~ 213 (476)
...++..++++++++++|.+.+ ...++|+|||+|+..++.++.. |++.|+++.++|++ +...++..|++++.+|.
T Consensus 43 ~~~~~~~~~~~~la~~~~~~~~-~~v~~~~sgt~al~~~~~~~~~--~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~ 119 (411)
T 3nnk_A 43 AMTHYMNEVMALYRGVFRTENR-WTMLVDGTSRAGIEAILVSAIR--PGDKVLVPVFGRFGHLLCEIARRCRAEVHTIEV 119 (411)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCS-EEEEEESCHHHHHHHHHHHHCC--TTCEEEEEECSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHhCCCCC-cEEEECCCcHHHHHHHHHHhcC--CCCEEEEecCCchHHHHHHHHHHcCCeEEEEec
Confidence 3457788899999999999853 3477888999999999988854 99999999999988 88899999999999999
Q ss_pred CCCCccCHHHHHHHHHc-CCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCC
Q 011842 214 LISGEIDCADFKAKLLQ-NKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKV 292 (476)
Q Consensus 214 ~~~g~~D~~~Le~~l~~-~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~ 292 (476)
+.++.+|+++|+++|++ +++ +|++++++|++|.+.|+++|+++|++||+ |+|+|++|+.+..+ +
T Consensus 120 ~~~~~~d~~~l~~~i~~~~~~---~v~~~~~~nptG~~~~l~~i~~l~~~~~~-----~li~Dea~~~~~~~-------~ 184 (411)
T 3nnk_A 120 PWGEVFTPDQVEDAVKRIRPR---LLLTVQGDTSTTMLQPLAELGEICRRYDA-----LFYTDATASLGGNP-------L 184 (411)
T ss_dssp CTTCCCCHHHHHHHHHHHCCS---EEEEESEETTTTEECCCTTHHHHHHHHTC-----EEEEECTTTBTTBC-------C
T ss_pred CCCCCCCHHHHHHHHhhCCCe---EEEEeCCCCCcceeccHHHHHHHHHHcCC-----EEEEECCcccCCcc-------c
Confidence 88899999999999986 554 88888999999999999999999999999 99999998765443 2
Q ss_pred CCcc-cccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCc----cccCC-------------------------CCCcc
Q 011842 293 SFKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNV----EYLAS-------------------------RDATI 342 (476)
Q Consensus 293 ~~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~----~yl~~-------------------------~~~~~ 342 (476)
+... .+|+++.++|||+++|.++|++++++++++.+.... .|... .....
T Consensus 185 ~~~~~~~d~~~~s~~K~l~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (411)
T 3nnk_A 185 ETDVWGLDAVSAGMQKCLGGPSGTSPITLSARMEEAIRRRKCVEEGIRTDAHRDGDEEMIYSNYFDLGMVMDYWGPERLN 264 (411)
T ss_dssp CTTTTTCSEEECCSTTTTCCCSSEEEEEECHHHHHHHHTTCCCCGGGCCTTCCCCSSCCCSCSTTCHHHHHHHHSTTCCC
T ss_pred chhccCCcEEEecCccccCCCCceEEEEECHHHHHHHhhcccccccccccccccccCCCCcccccchHHHHhhhccccCC
Confidence 3322 389999999999888999999999998765553221 11110 00111
Q ss_pred cCCCCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCC---eeEEEEecCC---cHHH----hh
Q 011842 343 MGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNEL---SSTVVFERPQ---DEEF----VR 412 (476)
Q Consensus 343 ~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~---~~iv~f~~~~---~~~~----~~ 412 (476)
.++.+......++++++.....++++..++..++++++.+.|++.|+....++. .+++.|..+. ..++ .+
T Consensus 265 ~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 344 (411)
T 3nnk_A 265 HHTEATTALFGARECARLILQEGLDYGIARHKLHGDALVKGIQAMGLETFGDLKHKMNNVLGVVIPQGINGDQARKLMLE 344 (411)
T ss_dssp CSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBCSCGGGBCSSEEEEECCTTCCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCEeCCCcccccccEEEEECCCCCCHHHHHHHHHH
Confidence 234443444556667776666778999999999999999999998776544332 4667777652 2222 22
Q ss_pred --ceeec-----ccCCEEEEEE-cCCCCHHHHHHHHHHHHHHHHHH
Q 011842 413 --RWQLA-----CQGNIAHVVV-MPNVTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 413 --~~~l~-----~~~~~lRv~~-~~~~T~edid~~~~~l~~~~~~~ 450 (476)
++.+. ..++.+|+++ ...+|++||++++++|+++.+++
T Consensus 345 ~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~ 390 (411)
T 3nnk_A 345 DFGIEIGTSFGPLHGKVWRIGTMGYNARKDCVMTTLSALEAVLNYL 390 (411)
T ss_dssp HHSEEEEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHT
T ss_pred hcCeEEeCccCCCCCCEEEEeCccCcCCHHHHHHHHHHHHHHHHHc
Confidence 33332 2357899998 55679999999999999988764
No 19
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.96 E-value=6.5e-28 Score=246.89 Aligned_cols=297 Identities=12% Similarity=0.090 Sum_probs=226.4
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchH--HHHHHHHcCCeEEEEeC
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYS--VFKAARMYRMECVKVDC 213 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S--~~~~~~~~G~~v~~v~~ 213 (476)
...++..++++++++++|.+.+ ...++|+|||+|+..++.++.. |++.|+++.++|++ +...++..|++++.+|+
T Consensus 41 ~~~~~~~~l~~~la~~~g~~~~-~~~~~~~s~t~al~~~~~~l~~--~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~ 117 (416)
T 3isl_A 41 AFTGIMNETMEMLRELFQTKNR-WAYPIDGTSRAGIEAVLASVIE--PEDDVLIPIYGRFGYLLTEIAERYGANVHMLEC 117 (416)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCS-EEEEEESCHHHHHHHHHHHHCC--TTCEEEEEESSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHhCCCCC-cEEEecCcHHHHHHHHHHHhcC--CCCEEEEecCCcccHHHHHHHHhcCCeeEEEec
Confidence 3467888999999999998753 2234788999999999888754 89999999999998 77889999999999999
Q ss_pred CCCCccCHHHHHHHHH-cCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCC
Q 011842 214 LISGEIDCADFKAKLL-QNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKV 292 (476)
Q Consensus 214 ~~~g~~D~~~Le~~l~-~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~ 292 (476)
+.++.+|+++|+++|+ .+++ +|++++++|++|.+.|+++|.++|++||+ ++|+|++|+.+..+ +
T Consensus 118 ~~~~~~d~~~l~~~i~~~~~~---~v~~~~~~nptG~~~~l~~i~~l~~~~~~-----~li~D~a~~~~~~~-------~ 182 (416)
T 3isl_A 118 EWGTVFDPEDIIREIKKVKPK---IVAMVHGETSTGRIHPLKAIGEACRTEDA-----LFIVDAVATIGGCE-------V 182 (416)
T ss_dssp CTTCCCCHHHHHHHHHHHCCS---EEEEESEETTTTEECCCHHHHHHHHHTTC-----EEEEECTTTTTTSC-------C
T ss_pred CCCCCCCHHHHHHHHhhCCCc---EEEEEccCCCCceecCHHHHHHHHHHcCC-----EEEEECCccccCCC-------c
Confidence 9889999999999998 4554 88898999999999999999999999999 99999999855443 2
Q ss_pred CCcc-cccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCc-----------------------cccC--------CCCC
Q 011842 293 SFKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNV-----------------------EYLA--------SRDA 340 (476)
Q Consensus 293 ~~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~-----------------------~yl~--------~~~~ 340 (476)
+... .+|+++.++|||+++|.++|++++++++++.+.... .|+. ....
T Consensus 183 ~~~~~~~d~~~~s~~K~l~g~~g~g~~~~~~~~~~~~~~~~~~~~Gw~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~ 262 (416)
T 3isl_A 183 KVDEWKIDAAIGGTQKCLSVPSGMAPITYNERVADVIAARKKVERGIATQADRAALSGNRPITSNYFDLSQLEDYWSERR 262 (416)
T ss_dssp CTTTTTCSEEECCSSSTTCCCSSEEEEEECHHHHHHHHTC------------------CCCCSCSTTCHHHHHHHTSTTC
T ss_pred chhhcCCCEEEecCccccCCCCCeEEEEECHHHHHHhhccccccccccccccchhccCCCCCCccccchHHHHhhhcccC
Confidence 2222 389999999999988999999999998765553210 0110 0011
Q ss_pred cccCCCCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCC---eeEEEEecCC---cHHH----
Q 011842 341 TIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNEL---SSTVVFERPQ---DEEF---- 410 (476)
Q Consensus 341 ~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~---~~iv~f~~~~---~~~~---- 410 (476)
...++.+......++++++.+...++++..++..++++++.+.|++.|+....++. .+++.|..+. ..++
T Consensus 263 ~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L 342 (416)
T 3isl_A 263 LNHHTEATTMLYALREGVRLVLEEGLETRFERHRHHEAALAAGIKAMGLRLFGDDSCKMPVVTCVEIPGGIDGESVRDML 342 (416)
T ss_dssp CCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBCSCGGGBCTTEEEEECCTTCCHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCEeccCccccCCcEEEEeCCCCCCHHHHHHHH
Confidence 11334444444556667777666678999999999999999999998765544332 3577777652 2222
Q ss_pred hh--ceeec-----ccCCEEEEEEcCCCCHHH-HHHHHHHHHHHHHHH
Q 011842 411 VR--RWQLA-----CQGNIAHVVVMPNVTIDK-LDDFLNELIENRSTW 450 (476)
Q Consensus 411 ~~--~~~l~-----~~~~~lRv~~~~~~T~ed-id~~~~~l~~~~~~~ 450 (476)
.+ ++.+. ...+.+|++++..+|.+| |++++++|+++.+++
T Consensus 343 ~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~~~~~ 390 (416)
T 3isl_A 343 LAQFGIEIASSFGPLAGKIWRIGTMGYSCRKENVLFVLAGLEAVLLRH 390 (416)
T ss_dssp HHHHCEECBCCCSTTTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHT
T ss_pred HHhCCEEEecCCCCCCCCEEEEecccCCCcHHHHHHHHHHHHHHHHHc
Confidence 22 33333 235789999977777666 999999999988764
No 20
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.96 E-value=1.3e-27 Score=242.77 Aligned_cols=298 Identities=14% Similarity=0.059 Sum_probs=220.7
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHH--HHHHHHcCCeEEEEeC
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSV--FKAARMYRMECVKVDC 213 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~--~~~~~~~G~~v~~v~~ 213 (476)
...+...++++++++++|.++ ..+++|+|||+|+..++.++.. |++.|++++++|+++ ...++..|++++.+|+
T Consensus 39 ~~~~~~~~l~~~la~~~g~~~--~~v~~t~g~t~a~~~~~~~~~~--~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~ 114 (392)
T 2z9v_A 39 AFQLLYEKVVDKAQKAMRLSN--KPVILHGEPVLGLEAAAASLIS--PDDVVLNLASGVYGKGFGYWAKRYSPHLLEIEV 114 (392)
T ss_dssp HHHHHHHHHHHHHHHHTTCSS--CCEEESSCTHHHHHHHHHHHCC--TTCCEEEEESSHHHHHHHHHHHHHCSCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHhCCCC--CEEEEeCCchHHHHHHHHHhcC--CCCEEEEecCCcccHHHHHHHHHcCCceEEeeC
Confidence 345677789999999999864 3599999999999999988754 899999999999886 3455667999999999
Q ss_pred CCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCC
Q 011842 214 LISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVS 293 (476)
Q Consensus 214 ~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~ 293 (476)
++++.+|+++|++++++. .++.+|++++++|++|.+.|+++|.++|++||+ ++|+|++|+.+..+ ++
T Consensus 115 ~~~~~~d~~~l~~~l~~~-~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~-----~li~D~a~~~g~~~-------~~ 181 (392)
T 2z9v_A 115 PYNEAIDPQAVADMLKAH-PEITVVSVCHHDTPSGTINPIDAIGALVSAHGA-----YLIVDAVSSFGGMK-------TH 181 (392)
T ss_dssp CTTSCCCHHHHHHHHHHC-TTCCEEEEESEEGGGTEECCHHHHHHHHHHTTC-----EEEEECTTTBTTBS-------CC
T ss_pred CCCCCCCHHHHHHHHhcC-CCCcEEEEeccCCCCceeccHHHHHHHHHHcCC-----eEEEEcccccCCcc-------cc
Confidence 888889999999999642 123478888999999999999999999999999 99999999854433 22
Q ss_pred Ccc-cccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCc-----cccC--------CCCCcccCCCCChhHHHHHHHHH
Q 011842 294 FKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNV-----EYLA--------SRDATIMGSRNGHAPIFLWYTLN 359 (476)
Q Consensus 294 ~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~-----~yl~--------~~~~~~~~sr~~~~~l~~~~~l~ 359 (476)
... .+|+++.|+|||+++|.|+|++++++++++.+.... .|+. .......++.+......+.++++
T Consensus 182 ~~~~~~d~~~~s~sK~~~~~~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~ 261 (392)
T 2z9v_A 182 PEDCKADIYVTGPNKCLGAPPGLTMMGVSERAWAKMKANPLAPRASMLSIVDWENAWSRDKPFPFTPSVSEINGLDVALD 261 (392)
T ss_dssp GGGGTCSEEEECSSSTTCCCSCCEEEEECHHHHHHHHTCTTSCCSSTTCSGGGTTTTSTTSCCSSCCCHHHHHHHHHHHH
T ss_pred cccccceEEEecCcccccCCCceeEEEECHHHHHHhhhccCCCCceeccHHHHHhhhcccCCCCCCCCHHHHHHHHHHHH
Confidence 222 379999999999998899999999988766553210 1111 00111233333333344556666
Q ss_pred HhChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecC----CeeEEEEecCC---cHHHh-----h-ceeecc-----cCC
Q 011842 360 RKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNE----LSSTVVFERPQ---DEEFV-----R-RWQLAC-----QGN 421 (476)
Q Consensus 360 ~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~----~~~iv~f~~~~---~~~~~-----~-~~~l~~-----~~~ 421 (476)
.+...|+++..++..++++++.+.|++.|+....++ ..+++.|..+. ..++. + ++.+.. ..+
T Consensus 262 ~~~~~g~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gi~v~~g~~~~~~~ 341 (392)
T 2z9v_A 262 LYLNEGPEAVWARHALTAKAMRAGVTAMGLSVWAASDSIASPTTTAVRTPDGVDEKALRQAARARYGVVFSSGRGETLGK 341 (392)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSSSGGGBCTTEEEEECCTTCCHHHHHHHHHHHHCEECEECCGGGTTT
T ss_pred HHHhccHHHHHHHHHHHHHHHHHHHHHcCCeeccCCccccCCceEEEECCCCCCHHHHHHHHHhcCCEEEecCCCCCCCC
Confidence 665556888999999999999999998876544323 24667777652 22222 2 333321 257
Q ss_pred EEEEEEcC-CCCHHHHHHHHHHHHHHHHHH
Q 011842 422 IAHVVVMP-NVTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 422 ~lRv~~~~-~~T~edid~~~~~l~~~~~~~ 450 (476)
.+|+++.. .+|++||++++++|+++.+++
T Consensus 342 ~lRi~~~~~~~~~~~i~~~~~~l~~~~~~~ 371 (392)
T 2z9v_A 342 LTRIGHMGPTAQPIYAIAALTALGGAMNAA 371 (392)
T ss_dssp EEEEECCGGGCSHHHHHHHHHHHHHHHHHT
T ss_pred eEEEeCcccccCHHHHHHHHHHHHHHHHHc
Confidence 89999654 899999999999999987654
No 21
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.96 E-value=2.2e-27 Score=239.26 Aligned_cols=293 Identities=17% Similarity=0.111 Sum_probs=215.7
Q ss_pred hhhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHh--hCCCcEEEecCCCchHHHHHHHH---cCCeEE
Q 011842 135 VHSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGRE--VFPDGILYASRESHYSVFKAARM---YRMECV 209 (476)
Q Consensus 135 ~~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~--~~p~~~Vl~s~~~H~S~~~~~~~---~G~~v~ 209 (476)
....++.+++++++++++|.++ .++++|+|+|+|+..++.++.. ..|++.|+++.++|+++...+.. .|++++
T Consensus 39 ~~~~~~~~~~~~~la~~~~~~~--~~i~~~~g~~~a~~~~~~~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~g~~~~ 116 (382)
T 4hvk_A 39 FKAREAVQEAREKVAKLVNGGG--GTVVFTSGATEANNLAIIGYAMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVE 116 (382)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTT--EEEEEESSHHHHHHHHHHHHHHHHGGGCCEEEEETTCCHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCc--CeEEEECCchHHHHHHHHHhhhhhcCCCCEEEECCCCcHHHHHHHHHHHhcCCEEE
Confidence 3456888899999999999975 3599999999999999988761 02899999999999999877665 499999
Q ss_pred EEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccC
Q 011842 210 KVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKA 289 (476)
Q Consensus 210 ~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~ 289 (476)
.+|+++++.+|+++|++++.+++ .+|++++++|++|.+.|+++|.++|++|| + +|+|++|+.+..+
T Consensus 117 ~v~~~~~~~~d~~~l~~~i~~~~---~~v~~~~~~nptG~~~~~~~i~~l~~~~~-----~-li~D~a~~~~~~~----- 182 (382)
T 4hvk_A 117 YIPVGKYGEVDVSFIDQKLRDDT---ILVSVQHANNEIGTIQPVEEISEVLAGKA-----A-LHIDATASVGQIE----- 182 (382)
T ss_dssp EECBCTTSCBCHHHHHHHCCTTE---EEEECCSBCTTTCBBCCHHHHHHHHSSSS-----E-EEEECTTTBTTBC-----
T ss_pred EeccCCCCCcCHHHHHHHhccCc---eEEEEECCCCCceeeCCHHHHHHHHHHcC-----E-EEEEhHHhcCCCC-----
Confidence 99999889999999999997554 48889999999999999999999999987 3 9999999765443
Q ss_pred CCCCCcc-cccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCC--C-cccCCCCChhHHHHHHHHHHhChhc
Q 011842 290 PKVSFKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRD--A-TIMGSRNGHAPIFLWYTLNRKGYKG 365 (476)
Q Consensus 290 ~~~~~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~--~-~~~~sr~~~~~l~~~~~l~~~g~~g 365 (476)
++... .+|+++.++||+++ |.++|+++++++. .+ ..++.... . ...++.+......+.+++... .++
T Consensus 183 --~~~~~~~~d~~~~s~~K~~g-~~g~g~~~~~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~-~~~ 253 (382)
T 4hvk_A 183 --VDVEKIGADMLTISSNDIYG-PKGVGALWIRKEA--KL---QPVILGGGQENGLRSGSENVPSIVGFGKAAEIT-AME 253 (382)
T ss_dssp --CCHHHHTCSEEEEESGGGTS-CTTCEEEEEETTC--CC---CCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHH-HHH
T ss_pred --CCchhcCCCEEEEeHHHhcC-CCceEEEEEcCcc--Cc---CcccccCCCcCccccCCcCHHHHHHHHHHHHHH-Hhh
Confidence 22222 37999999999865 7789999998764 11 11111110 0 112232222233343444433 457
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCeEeecCC----eeEEEEecCC--cHHHhh-----ceeeccc---------------
Q 011842 366 FQKEVQKCLRNAHYLKDRLLDAGISAMLNEL----SSTVVFERPQ--DEEFVR-----RWQLACQ--------------- 419 (476)
Q Consensus 366 ~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~----~~iv~f~~~~--~~~~~~-----~~~l~~~--------------- 419 (476)
+++..++..++++++.+.|++.+...+..+. .+++.|..+. ...+.+ ++.+...
T Consensus 254 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~ 333 (382)
T 4hvk_A 254 WREEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRFSYIEGESIVLSLDMAGIQASTGSACSSKTLQPSHVLM 333 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEEETTCCHHHHHHHHHHTTCBCBCC--------CCCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCCEEEEEECCCCHHHHHHHHHHCCEEEeeCCccCCCCCcchHHHH
Confidence 7889999999999999999987544443332 2466666553 233322 2222211
Q ss_pred ---------CCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHh
Q 011842 420 ---------GNIAHVVVMPNVTIDKLDDFLNELIENRSTWYE 452 (476)
Q Consensus 420 ---------~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~~ 452 (476)
.+.+|++++..+|++|+++++++|+++.+++.+
T Consensus 334 ~~g~~~~~~~~~iRl~~~~~~t~e~i~~~~~~l~~~~~~~~~ 375 (382)
T 4hvk_A 334 ACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIERLRS 375 (382)
T ss_dssp HTTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HcCCChhhcCCeEEEEcCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 478999999999999999999999999887765
No 22
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.96 E-value=2.9e-27 Score=247.63 Aligned_cols=354 Identities=16% Similarity=0.173 Sum_probs=246.1
Q ss_pred ccCCCCCcHHHHHHHHHHHHhcccc-----cccCCCCcCCcchHHHHHHHHHhhCCCCCCcccCccchhhHHHHHHHHHH
Q 011842 73 FTGDKEAYMAGVLARYRKTLMERTK-----HHLGYPYNLDFDYGALAQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDW 147 (476)
Q Consensus 73 ~~~~~~~~~~~il~~~~~~~~~~~~-----~~~g~p~~~~~~~~~l~~~l~~~~n~~g~~~~~~~~~~~~~~le~~~~~~ 147 (476)
++| +.+-.+++..+.+....+.. .++|. ......+..+.++... +... .++.......+..+++.++.++
T Consensus 41 ~lp--~~~e~~~~~~~~~l~~~~~~~~~~~~~lg~-~~~~~~p~v~~~~~~~-~~~~-~~~~~~~~~~g~~~l~~~l~~~ 115 (474)
T 1wyu_B 41 RLP--EVDELTLVRHYTGLSRRQVGVDTTFYPLGS-CTMKYNPKLHEEAARL-FADL-HPYQDPRTAQGALRLMWELGEY 115 (474)
T ss_dssp CCC--CCCHHHHHHHHHHHHTTCCCTTTSCCCBTT-TCCCCCCHHHHHHHHT-TSSC-CTTSCGGGCHHHHHHHHHHHHH
T ss_pred CCC--CCCHHHHHHHHHHHHhCCCCcccCcccccc-ccccCCHHHHHHHHHH-HHhc-CCCCchhhChHHHHHHHHHHHH
Confidence 456 56678899998887765432 24441 1222234555555554 2221 1221111245778999999999
Q ss_pred HHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhh--CCCc-----EEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccC
Q 011842 148 FARLWELENNEYWGYITNCGTEGNLHGILVGREV--FPDG-----ILYASRESHYSVFKAARMYRMECVKVDCLISGEID 220 (476)
Q Consensus 148 la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~--~p~~-----~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D 220 (476)
+++++|++. ..++|+|||+|+..++++++.. .+++ .|+++++.|.++..+++..|++++.||++++|.+|
T Consensus 116 la~~~g~~~---~~~~~~ggt~a~~~al~~~~~~~~~~Gd~~~r~~Vlv~~~~h~~~~~~~~~~G~~vv~v~~~~~~~~d 192 (474)
T 1wyu_B 116 LKALTGMDA---ITLEPAAGAHGELTGILIIRAYHEDRGEGRTRRVVLVPDSAHGSNPATASMAGYQVREIPSGPEGEVD 192 (474)
T ss_dssp HHHHHTCSE---EECCCSSHHHHHHHHHHHHHHHHHHTTCTTTCCEEEEETTSCTHHHHHHHHTTCEEEEECBCTTSSBC
T ss_pred HHHHHCCCc---eeecChHHHHHHHHHHHHHHHHHHhcCCccCCCEEEEeCCcChhhHHHHHHCCCEEEEecCCCCCCcC
Confidence 999999974 3668899999999988887632 2565 99999999999999999999999999998889999
Q ss_pred HHHHHHHHHcCCCCcEEEEEeeCCCccccc-cCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCcc-cc
Q 011842 221 CADFKAKLLQNKDKPAIINVNIGTTVKGAV-DDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKK-PI 298 (476)
Q Consensus 221 ~~~Le~~l~~~~~~p~~vv~t~gtt~tG~i-d~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~-~~ 298 (476)
+++|+++|.+++ .+|+++++ |++|.+ +|+++|+++|++||+ |+|+|++|+.+.+.. ....+ .+
T Consensus 193 ~~~L~~~i~~~t---~~v~~~~p-n~~G~~~~~l~~i~~l~~~~g~-----~li~Dea~~~~~~g~------~~~~~~g~ 257 (474)
T 1wyu_B 193 LEALKRELGPHV---AALMLTNP-NTLGLFERRILEISRLCKEAGV-----QLYYDGANLNAIMGW------ARPGDMGF 257 (474)
T ss_dssp HHHHHHHCSTTE---EEEEECSS-CTTSCCCTTHHHHHHHHHHHTC-----EEEEEGGGGGGTTTT------CCHHHHTC
T ss_pred HHHHHHhhCCCc---eEEEEECC-CCCcccCCCHHHHHHHHHHcCC-----EEEEeCchhhhhccC------CCcccCCC
Confidence 999999997654 47778776 579999 799999999999999 999999997654321 11111 38
Q ss_pred cEEEEcCCCCCCCCC-----CceeEEeehhhhhhhcCC------ccccCC--CCC---cc-cCCCCChhHHHHHHHHHHh
Q 011842 299 GSVSVSGHKFVGCPM-----PCGVQITRMEHINVLSSN------VEYLAS--RDA---TI-MGSRNGHAPIFLWYTLNRK 361 (476)
Q Consensus 299 Dsi~~s~hK~l~~p~-----~~G~l~~~~~~~~~l~~~------~~yl~~--~~~---~~-~~sr~~~~~l~~~~~l~~~ 361 (476)
|++++|+||++++|. ++|++++++++++.+... ..|... ... .+ .++.+.....+.|..+..+
T Consensus 258 di~~~s~~K~~~~p~g~gG~~~G~~~~~~~l~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~ 337 (474)
T 1wyu_B 258 DVVHLNLHKTFTVPHGGGGPGSGPVGVKAHLAPYLPVPLVERGEEGFYLDFDRPKSIGRVRSFYGNFLALVRAWAYIRTL 337 (474)
T ss_dssp SEEECCTTTTTCCCCTTSCCCCCCEEECGGGGGGCCSCEEEECSSCEEEECCCTTCCCCSSSTTSCHHHHHHHHHHHHHH
T ss_pred cEEEEeCccccccCCCCCCCCeEEEEEcHHHHHhCCCCeeeccCCeeEecccCcccCcccccCcCcHHHHHHHHHHHHHH
Confidence 999999999999885 799999999877655421 011100 000 00 1112222344556666667
Q ss_pred ChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCC-eeEEEEecC---CcHHHh-----hceeecc------cCCEEEEE
Q 011842 362 GYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNEL-SSTVVFERP---QDEEFV-----RRWQLAC------QGNIAHVV 426 (476)
Q Consensus 362 g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~-~~iv~f~~~---~~~~~~-----~~~~l~~------~~~~lRv~ 426 (476)
|.+++++..++..++++++.+.|++.|+....++. .+.+.+..+ ...++. +++.++. ..+.+|++
T Consensus 338 g~~~l~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~Gi~~~~~~~~~~~~~~lRis 417 (474)
T 1wyu_B 338 GLEGLKKAAALAVLNARYLKELLKEKGYRVPYDGPSMHEFVAQPPEGFRALDLAKGLLELGFHPPTVYFPLIVKEALMVE 417 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCBCSSCSSCCSCEEEBCSTTCCHHHHHHHHHHTTCCCCEESCSTTSTTCEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCcEecCCCCcceEEEEEcCCCCCHHHHHHHHHHCCccccccccccccCCEEEEE
Confidence 77889999999999999999999988665423322 221333332 122222 2333321 24689999
Q ss_pred EcCCCCHHHHHHHHHHHHHHHHH
Q 011842 427 VMPNVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 427 ~~~~~T~edid~~~~~l~~~~~~ 449 (476)
++..+|+++||+++++|+++.++
T Consensus 418 ~~~~~t~e~id~~~~~L~~~~~~ 440 (474)
T 1wyu_B 418 PTETEAKETLEAFAEAMGALLKK 440 (474)
T ss_dssp CCTTSCHHHHHHHHHHHHHHHTS
T ss_pred eecCCCHHHHHHHHHHHHHHHHh
Confidence 99999999999999999988643
No 23
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=99.96 E-value=6.8e-27 Score=236.33 Aligned_cols=294 Identities=14% Similarity=0.155 Sum_probs=212.1
Q ss_pred hHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHh--hCCCcEEEecCCCchHHHHHH---HHcCCeEEEE
Q 011842 137 SRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGRE--VFPDGILYASRESHYSVFKAA---RMYRMECVKV 211 (476)
Q Consensus 137 ~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~--~~p~~~Vl~s~~~H~S~~~~~---~~~G~~v~~v 211 (476)
..+...++++++++++|.+++ .+++|+|||+|+..++.+++. ..+++.|++++++|.++...+ +..|++++.+
T Consensus 42 ~~~~~~~l~~~la~~~g~~~~--~v~~~~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~v 119 (384)
T 1eg5_A 42 ANLHMEKAREKVAKVLGVSPS--EIFFTSCATESINWILKTVAETFEKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYV 119 (384)
T ss_dssp HHHHHHHHHHHHHHHHTSCGG--GEEEESCHHHHHHHHHHHHHHHTTTTCCEEEECTTSCHHHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHHHHHHHHcCCCCC--eEEEECCHHHHHHHHHHhhhhhccCCCCEEEECCCCchHHHHHHHHHHhcCCEEEEE
Confidence 456777888999999998743 599999999999999998872 138899999999999987666 6779999999
Q ss_pred eCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhC--CCCCceEEEEecCcccccccccccC
Q 011842 212 DCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESG--FTQDRFYIHCDGALFGLMMPFVKKA 289 (476)
Q Consensus 212 ~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g--~~~~~~~lhvD~a~~g~~~~~~~~~ 289 (476)
|+++++.+|+++|++++.++ +.+|++++++|++|.+.|+++|.++|++|| + ++|+|++|+.+..+
T Consensus 120 ~~~~~~~~d~~~l~~~i~~~---~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~-----~li~Dea~~~~~~~----- 186 (384)
T 1eg5_A 120 PVDSRGVVKLEELEKLVDED---TFLVSIMAANNEVGTIQPVEDVTRIVKKKNKET-----LVHVDAVQTIGKIP----- 186 (384)
T ss_dssp CBCTTSCBCHHHHHHHCCTT---EEEEEEESBCTTTCBBCCHHHHHHHHHHHCTTC-----EEEEECTTTTTTSC-----
T ss_pred ccCCCCccCHHHHHHHhCCC---CeEEEEECCCCCcccccCHHHHHHHHHhcCCce-----EEEEEhhhhcCCcc-----
Confidence 99888999999999998654 447888899999999999999999999999 9 99999999733222
Q ss_pred CCCCCcc-cccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCC---CCcccCCCCChhHHHHHHHHHHhChhc
Q 011842 290 PKVSFKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASR---DATIMGSRNGHAPIFLWYTLNRKGYKG 365 (476)
Q Consensus 290 ~~~~~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~---~~~~~~sr~~~~~l~~~~~l~~~g~~g 365 (476)
+++.. .+|+++.|+||+++ |.|+|++++++++ .+ ..++... .....++.+......++.+++.. .+.
T Consensus 187 --~~~~~~~~di~~~s~sK~~g-~~G~G~~~~~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~-~~~ 257 (384)
T 1eg5_A 187 --FSLEKLEVDYASFSAHKFHG-PKGVGITYIRKGV--PI---RPLIHGGGQERGLRSGTQNVPGIVGAARAMEIA-VEE 257 (384)
T ss_dssp --CCCTTTCCSEEEEEGGGGTS-CTTCEEEEECTTS--CC---CCSBCSSCTTTTTBCSCCCHHHHHHHHHHHHHH-HHT
T ss_pred --cCchhcCCCEEEecHHHhcC-CCceEEEEEcCCC--cc---ccccccCcccccccCCCCChHHHHHHHHHHHHH-HHh
Confidence 12222 37999999999866 5669999998864 11 1111110 01122333322333344455543 346
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCeEeecC---CeeEEEEecCC--cHHHhh-----ceeecc-----------------
Q 011842 366 FQKEVQKCLRNAHYLKDRLLDAGISAMLNE---LSSTVVFERPQ--DEEFVR-----RWQLAC----------------- 418 (476)
Q Consensus 366 ~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~---~~~iv~f~~~~--~~~~~~-----~~~l~~----------------- 418 (476)
+++..++..++++++.+.|++.|+....++ ....+.|..++ ..++.+ ++.+..
T Consensus 258 ~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~ 337 (384)
T 1eg5_A 258 LSEAAKHMEKLRSKLVSGLMNLGAHIITPLEISLPNTLSVSFPNIRGSTLQNLLSGYGIYVSTSSACTSKDERLRHVLDA 337 (384)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTCEECSCTTSBCTTEEEEECTTCCHHHHHHHHHHTTEECBC------------CHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCeEEeCCcccCCCCEEEEEeCCCCHHHHHHHHhhCCeEEeccccccCCCCcchHHHHH
Confidence 788899999999999999998776544332 12455665542 233322 222221
Q ss_pred -------cCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhcC
Q 011842 419 -------QGNIAHVVVMPNVTIDKLDDFLNELIENRSTWYEDG 454 (476)
Q Consensus 419 -------~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~~~~ 454 (476)
..+.+|++++..+|++|+++++++|+++.+++.+.+
T Consensus 338 ~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~~~ 380 (384)
T 1eg5_A 338 MGVDRRIAQGAIRISLCKYNTEEEVDYFLKKIEEILSFLDLTG 380 (384)
T ss_dssp TTCCHHHHHHEEEEECCTTCCHHHHHHHHHHHHHHHHHC----
T ss_pred cCCChhhcCCeEEEECCCCCCHHHHHHHHHHHHHHHHHHHhhc
Confidence 126899999999999999999999999988765443
No 24
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.96 E-value=3.5e-27 Score=238.46 Aligned_cols=292 Identities=17% Similarity=0.109 Sum_probs=214.0
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhh--CCCcEEEecCCCchHHHHHHHH---cCCeEEE
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREV--FPDGILYASRESHYSVFKAARM---YRMECVK 210 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~--~p~~~Vl~s~~~H~S~~~~~~~---~G~~v~~ 210 (476)
...+...++++++++++|.++ ..+++|+|||+|+..++.+++.. .|++.|++++++|.++...++. .|++++.
T Consensus 40 ~~~~~~~~l~~~la~~~g~~~--~~v~~~~g~t~a~~~~~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~ 117 (382)
T 4eb5_A 40 KAREAVQEAREKVAKLVNGGG--GTVVFTSGATEANNLAIIGYAMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEY 117 (382)
T ss_dssp HHHHHHHHHHHHHHHHHTCTT--EEEEEESSHHHHHHHHHHHHHHHHGGGCCEEEEETTCCHHHHHHHHHHTTTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHhCCCC--CeEEEcCchHHHHHHHHHHHHhhccCCCCEEEECCCcchHHHHHHHHHHhCCcEEEE
Confidence 345788889999999999874 35899999999999999988711 2899999999999999877765 5999999
Q ss_pred EeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCC
Q 011842 211 VDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAP 290 (476)
Q Consensus 211 v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~ 290 (476)
+|+++++.+|+++|+++|.++ +.+|++++++|++|.+.|+++|.++|++||+ | |+|++|+.+..+
T Consensus 118 v~~~~~~~~d~~~l~~~i~~~---~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~-----~-i~D~a~~~g~~~------ 182 (382)
T 4eb5_A 118 IPVGKYGEVDVSFIDQKLRDD---TILVSVQHANNEIGTIQPVEEISEVLAGKAA-----L-HIDATASVGQIE------ 182 (382)
T ss_dssp ECBCTTSCBCHHHHHHHCCTT---EEEEECCSBCTTTCBBCCHHHHHHHHTTSSE-----E-EEECTTTBTTBC------
T ss_pred eccCCCCccCHHHHHHHhcCC---CeEEEEeccCCCccccCCHHHHHHHHHHCCC-----E-EEEcchhcCCcc------
Confidence 999888999999999998654 3488888999999999999999999999999 9 999999843322
Q ss_pred CCCCcc-cccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCC---CCcccCCCCChhHHHHHHHHHHhChhcH
Q 011842 291 KVSFKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASR---DATIMGSRNGHAPIFLWYTLNRKGYKGF 366 (476)
Q Consensus 291 ~~~~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~---~~~~~~sr~~~~~l~~~~~l~~~g~~g~ 366 (476)
+++.. .+|+++.|+||+++ |.|+|+++++++. .+ ..++.+. .....++.+......+.++++.+ .+++
T Consensus 183 -~~~~~~~~di~~~s~sK~~g-~~g~G~~~~~~~~--~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~-~~~~ 254 (382)
T 4eb5_A 183 -VDVEKIGADMLTISSNDIYG-PKGVGALWIRKEA--KL---QPVILGGGQENGLRSGSENVPSIVGFGKAAEIT-AMEW 254 (382)
T ss_dssp -CCHHHHTCSEEEEETGGGTC-CSSCEEEEEETTC--CC---CCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHH-HHHH
T ss_pred -cCccccCCCEEEeehHHhcC-CCceEEEEEcccc--cc---CceecCCCccccccCCCccHHHHHHHHHHHHHH-HHhH
Confidence 22222 37999999999855 7789999998763 11 1111110 01112333322233444555544 3467
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCeEeecCC----eeEEEEecCC--cHHHhh-----ceeecc-----------------
Q 011842 367 QKEVQKCLRNAHYLKDRLLDAGISAMLNEL----SSTVVFERPQ--DEEFVR-----RWQLAC----------------- 418 (476)
Q Consensus 367 ~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~----~~iv~f~~~~--~~~~~~-----~~~l~~----------------- 418 (476)
+++.++..++++++.+.|++.+...+..+. .+++.|..++ ..++.+ ++.+..
T Consensus 255 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~ 334 (382)
T 4eb5_A 255 REEAERLRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRFSYIEGESIVLSLDMAGIQASTGSACSSKTLQPSHVLMA 334 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEEETTSCHHHHHHHHHHHTCBCBCCCGGGTSSCCCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCeEEeCCcccCCCCEEEEEeCCcCHHHHHHHHHHCCEEEeccccccCCCCcccHHHHH
Confidence 888999999999999999987333343332 4466676552 233322 222211
Q ss_pred -------cCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHh
Q 011842 419 -------QGNIAHVVVMPNVTIDKLDDFLNELIENRSTWYE 452 (476)
Q Consensus 419 -------~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~~ 452 (476)
..+.+|++++..+|++|+++++++|+++.+++.+
T Consensus 335 ~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 375 (382)
T 4eb5_A 335 CGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIERLRS 375 (382)
T ss_dssp TTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCChhccCCeEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 1368999999999999999999999999877654
No 25
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.96 E-value=2.4e-27 Score=241.21 Aligned_cols=293 Identities=15% Similarity=0.154 Sum_probs=221.0
Q ss_pred hHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchH--HHHHHHHcCCeEEEEeCC
Q 011842 137 SRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYS--VFKAARMYRMECVKVDCL 214 (476)
Q Consensus 137 ~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S--~~~~~~~~G~~v~~v~~~ 214 (476)
..++.+++++++++++|.+++ ..+++|+|||+|+..++.++.. |++.|++++++|.+ +...++..|++++.+|.+
T Consensus 65 ~~~~~~~~~~~la~~~g~~~~-~~v~~t~g~t~al~~~~~~~~~--~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 141 (393)
T 1vjo_A 65 FLALMDEIQSLLRYVWQTENP-LTIAVSGTGTAAMEATIANAVE--PGDVVLIGVAGYFGNRLVDMAGRYGADVRTISKP 141 (393)
T ss_dssp HHHHHHHHHHHHHHHHTCCCS-CEEEESSCHHHHHHHHHHHHCC--TTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHHHHHHhCCCCC-cEEEEeCchHHHHHHHHHhccC--CCCEEEEEcCChhHHHHHHHHHHcCCceEEEecC
Confidence 458889999999999999643 2599999999999999988865 89999999999999 999999999999999998
Q ss_pred CCCccCHHHHHHHHHc-CCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCC
Q 011842 215 ISGEIDCADFKAKLLQ-NKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVS 293 (476)
Q Consensus 215 ~~g~~D~~~Le~~l~~-~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~ 293 (476)
+++.+|+++|++++.+ +++ +|++++++|++|.+.|+++|.++|++||+ ++++|++|+.+..+ ++
T Consensus 142 ~~~~~d~~~l~~~l~~~~~~---~v~~~~~~nptG~~~~l~~i~~l~~~~~~-----~li~Dea~~~g~~~-------~~ 206 (393)
T 1vjo_A 142 WGEVFSLEELRTALETHRPA---ILALVHAETSTGARQPLEGVGELCREFGT-----LLLVDTVTSLGGVP-------IF 206 (393)
T ss_dssp TTCCCCHHHHHHHHHHHCCS---EEEEESEETTTTEECCCTTHHHHHHHHTC-----EEEEECTTTTTTSC-------CC
T ss_pred CCCCCCHHHHHHHHhhCCce---EEEEeccCCCcceeccHHHHHHHHHHcCC-----EEEEECCccccCcC-------Cc
Confidence 8888999999999987 554 78888999999999999999999999999 99999999843322 22
Q ss_pred Ccc-cccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCC----ccccCC--------CCCcccC-CCCChhHHHHHHHHH
Q 011842 294 FKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSN----VEYLAS--------RDATIMG-SRNGHAPIFLWYTLN 359 (476)
Q Consensus 294 ~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~----~~yl~~--------~~~~~~~-sr~~~~~l~~~~~l~ 359 (476)
... .+|+++.++||++++|.++|++++++++++.+... ..+..+ ......+ +.+......+..+++
T Consensus 207 ~~~~~~di~~~s~sK~l~~~~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~ 286 (393)
T 1vjo_A 207 LDAWGVDLAYSCSQKGLGCSPGASPFTMSSRAIEKLQRRRTKVANWYLDMNLLGKYWGSERVYHHTAPINLYYALREALR 286 (393)
T ss_dssp TTTTTCSEEECCSSSTTCSCSSCEEEEECHHHHHHHHTCSSCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHH
T ss_pred ccccCccEEEEcCcccccCCCceEEEEECHHHHHHHhccCCCCCceecCcHhhhhhhccCCCCCCCCCHHHHHHHHHHHH
Confidence 222 37999999999999888999999999876655221 111110 0001122 444333445556666
Q ss_pred HhChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCC---eeEEEEecCC---cHHH----h-h-ceeecc-----cCCE
Q 011842 360 RKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNEL---SSTVVFERPQ---DEEF----V-R-RWQLAC-----QGNI 422 (476)
Q Consensus 360 ~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~---~~iv~f~~~~---~~~~----~-~-~~~l~~-----~~~~ 422 (476)
.+...++++..++..++++++.+.|++.|+....++. .+++.|..+. ..++ . + ++.+.. ..+.
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~ 366 (393)
T 1vjo_A 287 LIAQEGLANCWQRHQKNVEYLWERLEDIGLSLHVEKEYRLPTLTTVCIPDGVDGKAVARRLLNEHNIEVGGGLGELAGKV 366 (393)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSCGGGBCSSEEEEECCTTCCHHHHHHHHHHHHCEECEECCGGGTTTE
T ss_pred HHHHccHHHHHHHHHHHHHHHHHHHHHcCCcccCCccccCCcEEEEEcCCCCCHHHHHHHHHhhCCEEEecCccccCCCE
Confidence 6545578889999999999999999988765443322 3566676652 2222 2 2 344321 2478
Q ss_pred EEEEE-cCCCCHHHHHHHHHHHHHHH
Q 011842 423 AHVVV-MPNVTIDKLDDFLNELIENR 447 (476)
Q Consensus 423 lRv~~-~~~~T~edid~~~~~l~~~~ 447 (476)
+|+++ ...++++++++++++|+++.
T Consensus 367 iRis~~~~~~~~~~i~~~~~~l~~~l 392 (393)
T 1vjo_A 367 WRVGLMGFNSRKESVDQLIPALEQVL 392 (393)
T ss_dssp EEEECCGGGCSHHHHHHHHHHHHHHH
T ss_pred EEEeCCccCChHHHHHHHHHHHHHHh
Confidence 99995 45567889999999998764
No 26
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.96 E-value=1.2e-27 Score=238.81 Aligned_cols=294 Identities=14% Similarity=0.149 Sum_probs=219.6
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHH--HHHHHHcCCeEEEEeC
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSV--FKAARMYRMECVKVDC 213 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~--~~~~~~~G~~v~~v~~ 213 (476)
...+...++++++++++|.+.+...+++|+|||+|+..++.+++ + +.|++++++|+++ ...++..|++++.+|.
T Consensus 30 ~~~~~~~~l~~~la~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~---~-d~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~ 105 (353)
T 2yrr_A 30 EVLRVNRAIQERLAALFDPGEGALVAALAGSGSLGMEAGLANLD---R-GPVLVLVNGAFSQRVAEMAALHGLDPEVLDF 105 (353)
T ss_dssp HHHHHHHHHHHHHHHHHCCCTTCEEEEESSCHHHHHHHHHHTCS---C-CCEEEEECSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCceEEEcCCcHHHHHHHHHHhc---C-CcEEEEcCCCchHHHHHHHHHcCCceEEEeC
Confidence 34577889999999999996333569999999999998887764 2 6788889899984 5667888999999999
Q ss_pred CCCCccCHHHHHHHHHc-CCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCC
Q 011842 214 LISGEIDCADFKAKLLQ-NKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKV 292 (476)
Q Consensus 214 ~~~g~~D~~~Le~~l~~-~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~ 292 (476)
++++.+|+++|++++++ +++ +|++++++|++|.+.|+++|.++|++||+ |+|+|++|+.+..+ +
T Consensus 106 ~~~~~~d~~~l~~~l~~~~~~---~v~~~~~~nptG~~~~~~~i~~l~~~~~~-----~li~D~a~~~~~~~-------~ 170 (353)
T 2yrr_A 106 PPGEPVDPEAVARALKRRRYR---MVALVHGETSTGVLNPAEAIGALAKEAGA-----LFFLDAVTTLGMLP-------F 170 (353)
T ss_dssp CTTSCCCHHHHHHHHHHSCCS---EEEEESEETTTTEECCHHHHHHHHHHHTC-----EEEEECTTTTTTSC-------C
T ss_pred CCCCCCCHHHHHHHHHhCCCC---EEEEEccCCCcceecCHHHHHHHHHHcCC-----eEEEEcCccccccc-------c
Confidence 88889999999999987 444 78888999999999999999999999999 99999999744332 2
Q ss_pred CCcc-cccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCc-cccC-------CCCCcccCCCCChhHHHHHHHHHHhCh
Q 011842 293 SFKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNV-EYLA-------SRDATIMGSRNGHAPIFLWYTLNRKGY 363 (476)
Q Consensus 293 ~~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~-~yl~-------~~~~~~~~sr~~~~~l~~~~~l~~~g~ 363 (476)
+... .+|++++++|||+++|.|+|+++++++.++.+.... .|+. .......++.+......++++++.+..
T Consensus 171 ~~~~~~~d~~~~s~~K~~~~~~g~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~ 250 (353)
T 2yrr_A 171 SMRAMGVDYAFTGSQKCLSAPPGLAPIAASLEARKAFTGKRGWYLDLARVAEHWERGGYHHTTPVLLHYALLEALDLVLE 250 (353)
T ss_dssp CHHHHTCSEEECCTTSTTCCCSSCEEEEECHHHHHHCCCCSCSTTCHHHHHHHHTTCCCSSCCCHHHHHHHHHHHHHHHH
T ss_pred cccccCceEEEecCcccccCCCceEEEEECHHHHHHhccCCCccccHHHHhhhhhcCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 2222 379999999999988889999999998776653211 1110 001112334443333445566666655
Q ss_pred hcHHHHHHHHHHHHHHHHHHHHhcCCeEeecC--CeeEEEEecCC---cHHHh-----hceeec-----ccCCEEEEEEc
Q 011842 364 KGFQKEVQKCLRNAHYLKDRLLDAGISAMLNE--LSSTVVFERPQ---DEEFV-----RRWQLA-----CQGNIAHVVVM 428 (476)
Q Consensus 364 ~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~--~~~iv~f~~~~---~~~~~-----~~~~l~-----~~~~~lRv~~~ 428 (476)
.++++..++..++++++.+.|++.|+....++ ...++.|..+. ..++. ++..+. ...+.+|++++
T Consensus 251 ~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~iRi~~~ 330 (353)
T 2yrr_A 251 EGVAARERRAREVYAWVLEELKARGFRPYPKASPLPTVLVVRPPEGVDADRLVRALYAEGVAVAGGIGPTRGQVLRLGLM 330 (353)
T ss_dssp HCHHHHHHHHHHHHHHHHHHHHHTTCEESCSSSBCTTEEEEECCTTCCHHHHHHHHHHTTEECEECCGGGTTTCEEEECS
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHCCCccccCccCCCeEEEEECCCCCCHHHHHHHHHHCCEEEeCCccccCCCeEEEecC
Confidence 67889999999999999999998876544333 34555677652 23332 233332 12468999999
Q ss_pred CCCCHHHHH-HHHHHHHHHHH
Q 011842 429 PNVTIDKLD-DFLNELIENRS 448 (476)
Q Consensus 429 ~~~T~edid-~~~~~l~~~~~ 448 (476)
..+|++|++ +++++|+++.+
T Consensus 331 ~~~~~~~~~~~~~~~l~~~l~ 351 (353)
T 2yrr_A 331 GEGARREAYQAFLKALDRALA 351 (353)
T ss_dssp GGGSCHHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHHHh
Confidence 899999999 99999988764
No 27
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.96 E-value=2e-27 Score=237.57 Aligned_cols=292 Identities=12% Similarity=0.050 Sum_probs=216.1
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHH--HHHHHcCCeEEEEeC
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVF--KAARMYRMECVKVDC 213 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~--~~~~~~G~~v~~v~~ 213 (476)
...+...++++++++++|.++ ..+++|+|||+|+..++.++.. |++.|+++.++|+++. ..++..|++++.++.
T Consensus 31 ~~~~~~~~l~~~la~~~g~~~--~~i~~~~g~t~a~~~~~~~~~~--~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~ 106 (352)
T 1iug_A 31 AAREVFLKARGLLREAFRTEG--EVLILTGSGTLAMEALVKNLFA--PGERVLVPVYGKFSERFYEIALEAGLVVERLDY 106 (352)
T ss_dssp HHHHHHHHHHHHHHHHHTCSS--EEEEEESCHHHHHHHHHHHHCC--TTCEEEEEECSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHhCCCC--ceEEEcCchHHHHHHHHHhccC--CCCeEEEEeCCchhHHHHHHHHHcCCceEEEeC
Confidence 345677889999999999874 3599999999999999988754 8999999999999965 455667999999999
Q ss_pred CCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHh--CCCCCceEEEEecCcccccccccccCCC
Q 011842 214 LISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEES--GFTQDRFYIHCDGALFGLMMPFVKKAPK 291 (476)
Q Consensus 214 ~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~--g~~~~~~~lhvD~a~~g~~~~~~~~~~~ 291 (476)
++++.+|+++|++ +++ .+|++++++|++|.+.|+++|.++|++| |+ |+|+|++|+.+..+
T Consensus 107 ~~~~~~d~~~l~~---~~~---~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~~-----~li~D~a~~~~~~~------- 168 (352)
T 1iug_A 107 PYGDTPRPEDVAK---EGY---AGLLLVHSETSTGALADLPALARAFKEKNPEG-----LVGADMVTSLLVGE------- 168 (352)
T ss_dssp CTTCCCCTTTSCC---SSC---SEEEEESEETTTTEECCHHHHHHHHHHHCTTC-----EEEEECTTTBTTBC-------
T ss_pred CCCCCCCHHHHhc---cCC---cEEEEEEecCCcceecCHHHHHHHHHhhCCCC-----EEEEECCccccCcc-------
Confidence 8888899998877 333 3788889999999999999999999999 99 99999999754332
Q ss_pred CCCcc-cccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccC-------CCCCcccCCCCChhHHHHHHHHHHhCh
Q 011842 292 VSFKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLA-------SRDATIMGSRNGHAPIFLWYTLNRKGY 363 (476)
Q Consensus 292 ~~~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~-------~~~~~~~~sr~~~~~l~~~~~l~~~g~ 363 (476)
++... .+|+++.++|||+++|.|+|+++++++.++.+.....|+. .......++.+......+.++++.+..
T Consensus 169 ~~~~~~~~d~~~~s~~K~~~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~ 248 (352)
T 1iug_A 169 VALEAMGVDAAASGSQKGLMCPPGLGFVALSPRALERLKPRGYYLDLARELKAQKEGESAWTPAINLVLAVAAVLEEVLP 248 (352)
T ss_dssp CCSGGGTCSEEEEESSSTTCCCSCEEEEEECHHHHHTCCCCSSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHGG
T ss_pred eeccccCeeEEEecCcccccCCCceeEEEECHHHHHHhhCCCceeeHHHHHhhcccCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 22222 3799999999999989999999999886654321000100 000111233332233344556665543
Q ss_pred hcHHHHHHHHHHHHHHHHHHHHhcCCeEeecC-CeeEEEEecCC---cHHHhh-----ceeecc-----cCCEEEEEEcC
Q 011842 364 KGFQKEVQKCLRNAHYLKDRLLDAGISAMLNE-LSSTVVFERPQ---DEEFVR-----RWQLAC-----QGNIAHVVVMP 429 (476)
Q Consensus 364 ~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~-~~~iv~f~~~~---~~~~~~-----~~~l~~-----~~~~lRv~~~~ 429 (476)
. +++..++..++++++.+.|++.|+....++ ..+++.|..+. ..++.+ ++.+.. ..+.+|++++.
T Consensus 249 ~-~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~iRi~~~~ 327 (352)
T 1iug_A 249 R-LEEHLALKAWQNALLYGVGEEGGLRPVPKRFSPAVAAFYLPEGVPYARVKEAFAQRGAVIAGGQGPLKGKVFRLSLMG 327 (352)
T ss_dssp G-HHHHHHHHHHHHHHHHHHHHHTTCEESCSSBCTTCEEEECCTTCCHHHHHHHHHTTTEECEECCGGGTTTEEEECCCS
T ss_pred H-HHHHHHHHHHHHHHHHHHHHHCCCcccccccCCeEEEEEcCCCCCHHHHHHHHHHCCEEEEeCCCccCCCEEEEEccc
Confidence 3 788899999999999999998876544332 45677777652 233322 233321 24789999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHH
Q 011842 430 NVTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 430 ~~T~edid~~~~~l~~~~~~~ 450 (476)
.+|++|+++++++|+++.+++
T Consensus 328 ~~~~~~i~~~~~~l~~~~~~~ 348 (352)
T 1iug_A 328 AYDRYEALGVAGMFREVLEEI 348 (352)
T ss_dssp SCCHHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHh
Confidence 999999999999999988765
No 28
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.96 E-value=1.2e-26 Score=237.69 Aligned_cols=298 Identities=14% Similarity=0.054 Sum_probs=218.3
Q ss_pred HHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHh--hCCCcEEEecCCCchH----HHHHHHHcCCeEEEE
Q 011842 138 RQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGRE--VFPDGILYASRESHYS----VFKAARMYRMECVKV 211 (476)
Q Consensus 138 ~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~--~~p~~~Vl~s~~~H~S----~~~~~~~~G~~v~~v 211 (476)
.....++++++++++|.+ +...+++|+|||+|+..++.+++. ..+++.|+++.++|.+ +...++..|++++.+
T Consensus 71 ~~~~~~l~~~la~~~~~~-~~~~v~~~~g~t~a~~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v 149 (420)
T 1t3i_A 71 TDAYEAVRNKVAKFINAR-SPREIVYTRNATEAINLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFV 149 (420)
T ss_dssp HHHHHHHHHHHHHHTTCS-CGGGEEEESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEE
T ss_pred HHHHHHHHHHHHHHcCCC-CCCeEEEcCChHHHHHHHHHHhhhcccCCCCEEEECcchhHHHHHHHHHHHHhcCcEEEEe
Confidence 355667888899999983 123599999999999999988731 2488999999999998 667788899999999
Q ss_pred eCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCC
Q 011842 212 DCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPK 291 (476)
Q Consensus 212 ~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~ 291 (476)
|.++++.+|+++|+++|.++ +.+|++++++|++|.+.|+++|.++|++||+ ++|+|++|+.+..+
T Consensus 150 ~~~~~~~~d~~~l~~~l~~~---~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~-----~li~D~a~~~~~~~------- 214 (420)
T 1t3i_A 150 QLDEQESFDLEHFKTLLSEK---TKLVTVVHISNTLGCVNPAEEIAQLAHQAGA-----KVLVDACQSAPHYP------- 214 (420)
T ss_dssp CBCTTSSBCHHHHHHHCCTT---EEEEEEESBCTTTCBBCCHHHHHHHHHHTTC-----EEEEECTTTTTTSC-------
T ss_pred ccCCCCCcCHHHHHHhhCCC---ceEEEEeCCcccccCcCCHHHHHHHHHHcCC-----EEEEEhhhccCCcc-------
Confidence 99888899999999999654 4588889999999999999999999999999 99999999865443
Q ss_pred CCCcc-cccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccC-------------CCCCccc-CCCCChhHHHHHH
Q 011842 292 VSFKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLA-------------SRDATIM-GSRNGHAPIFLWY 356 (476)
Q Consensus 292 ~~~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~-------------~~~~~~~-~sr~~~~~l~~~~ 356 (476)
+++.. ..|+++.|+||.++ |.++|++++++++++.+......-. .....+. ++.+....++++.
T Consensus 215 ~~~~~~~~di~~~s~sK~~~-~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 293 (420)
T 1t3i_A 215 LDVQLIDCDWLVASGHKMCA-PTGIGFLYGKEEILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGA 293 (420)
T ss_dssp CCHHHHTCSEEEEEGGGTTS-CTTCEEEEECHHHHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHH
T ss_pred CchhhcCCCEEEEehhhhcC-CCceEEEEEchHHHhhcCceecCCCccccccccccCCCCchhhccCCCccHHHHHHHHH
Confidence 12222 37999999999554 7779999999887766532211000 0001111 2332222333444
Q ss_pred HHHHhChhcHHHHHHHHHHHHHHHHHHHHhc-CCeEeecC-----CeeEEEEecCC--cHHHhh-----ceeeccc----
Q 011842 357 TLNRKGYKGFQKEVQKCLRNAHYLKDRLLDA-GISAMLNE-----LSSTVVFERPQ--DEEFVR-----RWQLACQ---- 419 (476)
Q Consensus 357 ~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~-g~~~~~~~-----~~~iv~f~~~~--~~~~~~-----~~~l~~~---- 419 (476)
+++.+...+++++.++..++++++.+.|++. ++....++ ..+++.|..++ ..++.+ ++.+...
T Consensus 294 al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~ 373 (420)
T 1t3i_A 294 AVDYLTDLGMENIHNYEVELTHYLWQGLGQIPQLRLYGPNPKHGDRAALASFNVAGLHASDVATMVDQDGIAIRSGHHCT 373 (420)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHHHHHHTCTTEEEESCCGGGSCBCSEEEEEETTBCHHHHHHHHHTTTEECBCSCTTC
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHhCCCeEEeCCCccccccCCEEEEEECCCCHHHHHHHHHHCCeEEeeccccc
Confidence 5666655578889999999999999999997 54433332 26677777653 223322 2233221
Q ss_pred ---------CCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHh
Q 011842 420 ---------GNIAHVVVMPNVTIDKLDDFLNELIENRSTWYE 452 (476)
Q Consensus 420 ---------~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~~ 452 (476)
.+.+|++++..+|++|+++++++|+++.+.+.+
T Consensus 374 ~~~~~~~g~~~~iRis~~~~~~~~~i~~~~~~l~~~~~~~~~ 415 (420)
T 1t3i_A 374 QPLHRLFDASGSARASLYFYNTKEEIDLFLQSLQATIRFFSD 415 (420)
T ss_dssp HHHHHHTTCCCCEEEECCTTCCHHHHHHHHHHHHHHHHHTC-
T ss_pred hHHHHhcCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 468999999999999999999999999876543
No 29
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.96 E-value=1.3e-26 Score=235.46 Aligned_cols=297 Identities=14% Similarity=0.122 Sum_probs=219.6
Q ss_pred hHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHH--HHHHHHcCCeEEEEeCC
Q 011842 137 SRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSV--FKAARMYRMECVKVDCL 214 (476)
Q Consensus 137 ~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~--~~~~~~~G~~v~~v~~~ 214 (476)
..+...++++++++++|.+++ ..+++|+|||+|+..++.++.. |++.|+++.++|++. ...++..|++++.+|.+
T Consensus 50 ~~~~~~~l~~~la~~~g~~~~-~~i~~~~g~t~a~~~~~~~~~~--~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 126 (393)
T 2huf_A 50 TLKIMDDIKEGVRYLFQTNNI-ATFCLSASGHGGMEATLCNLLE--DGDVILIGHTGHWGDRSADMATRYGADVRVVKSK 126 (393)
T ss_dssp HHHHHHHHHHHHHHHHTCCCS-EEEEESSCHHHHHHHHHHHHCC--TTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHHHHHHhCCCCC-cEEEEcCcHHHHHHHHHHHHhC--CCCEEEEECCCcchHHHHHHHHHcCCeeEEEeCC
Confidence 346778889999999998743 3588999999999999988754 899999999999884 34556689999999998
Q ss_pred CCCccCHHHHHHHHHc-CCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCC
Q 011842 215 ISGEIDCADFKAKLLQ-NKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVS 293 (476)
Q Consensus 215 ~~g~~D~~~Le~~l~~-~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~ 293 (476)
+++.+|+++|+++|++ +++ +|++++++|++|.+.|+++|.++|++||+ ++|+|++|+.+..+ ++
T Consensus 127 ~~~~~d~~~l~~~i~~~~~~---~v~~~~~~nptG~~~~l~~i~~~~~~~~~-----~li~D~a~~~~~~~-------~~ 191 (393)
T 2huf_A 127 VGQSLSLDEIRDALLIHKPS---VLFLTQGDSSTGVLQGLEGVGALCHQHNC-----LLIVDTVASLGGAP-------MF 191 (393)
T ss_dssp TTCCCCHHHHHHHHHHHCCS---EEEEESEETTTTEECCCTTHHHHHHHTTC-----EEEEECTTTBTTBC-------CC
T ss_pred CCCCCCHHHHHHHHhccCCc---EEEEEccCCCccccCCHHHHHHHHHHcCC-----EEEEEcccccCCCC-------cc
Confidence 8888999999999987 555 78888999999999999999999999999 99999998754332 22
Q ss_pred Ccc-cccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCC----ccccCC------------CCCcccCCCCChhHHHHHH
Q 011842 294 FKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSN----VEYLAS------------RDATIMGSRNGHAPIFLWY 356 (476)
Q Consensus 294 ~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~----~~yl~~------------~~~~~~~sr~~~~~l~~~~ 356 (476)
... .+|+++.++||++++|.|+|++++++++++.+... ..|... ......++.+.....++.+
T Consensus 192 ~~~~~~d~~~~s~sK~l~g~~G~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 271 (393)
T 2huf_A 192 MDRWEIDAMYTGSQKVLGAPPGITPVSFSHRAVERYKRRNTKVKVYYWDMSLVGDYWGCFGRPRIYHHTISSTLLYGLRE 271 (393)
T ss_dssp TTTTTCSEEECCSSSTTCCCSSCEEEEECHHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCSCCCCHHHHHHHHH
T ss_pred hhhcCccEEEECCCcccccCCCeEEEEECHHHHHHHhhcCCCCceEEEchHHHHhhhccccccCCCCCCCCHHHHHHHHH
Confidence 222 37999999999988888999999998876665322 222110 0011123333333334445
Q ss_pred HHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecC--Cee-EEEEecCC---cHHH----h-h-ceeecc-----c
Q 011842 357 TLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNE--LSS-TVVFERPQ---DEEF----V-R-RWQLAC-----Q 419 (476)
Q Consensus 357 ~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~--~~~-iv~f~~~~---~~~~----~-~-~~~l~~-----~ 419 (476)
+++.+...++++..++..++++++.+.|++.|+....++ .++ ++.|..+. ..++ . + ++.+.. .
T Consensus 272 al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~gi~v~~g~~~~~ 351 (393)
T 2huf_A 272 AIAMACEEGLPALIARHEDCAKRLYRGLQDAGFELYADPKDRLSTVTTIKVPQGVDWLKAAQYAMKTYLVEISGGLGPTA 351 (393)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSCGGGBCTTEEEEECCTTCCHHHHHHHHHHHHCEECBCCCGGGT
T ss_pred HHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCeeccCccccCCcEEEEEcCCCCCHHHHHHHHHHhCCEEEecCccccc
Confidence 666554457888999999999999999999876544332 133 66676652 2222 2 2 344432 3
Q ss_pred CCEEEEEEcC-CCCHHHHHHHHHHHHHHHHHHH
Q 011842 420 GNIAHVVVMP-NVTIDKLDDFLNELIENRSTWY 451 (476)
Q Consensus 420 ~~~lRv~~~~-~~T~edid~~~~~l~~~~~~~~ 451 (476)
.+.+|++++. .++++++++++++|+++.+++.
T Consensus 352 ~~~~Ri~~~~~~~~~e~i~~~~~~l~~~~~~~~ 384 (393)
T 2huf_A 352 GQVFRIGLMGQNATTERVDRVLQVFQEAVAAVK 384 (393)
T ss_dssp TTEEEEECCGGGCSHHHHHHHHHHHHHHHHHHC
T ss_pred CCEEEEEcccCcCCHHHHHHHHHHHHHHHHHcC
Confidence 4789999955 5689999999999999887653
No 30
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.96 E-value=2e-26 Score=233.63 Aligned_cols=296 Identities=11% Similarity=0.089 Sum_probs=222.1
Q ss_pred hHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchH--HHHHHHHcCCeEEEEeCC
Q 011842 137 SRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYS--VFKAARMYRMECVKVDCL 214 (476)
Q Consensus 137 ~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S--~~~~~~~~G~~v~~v~~~ 214 (476)
..++..++++++++++|.+. ..++++|+|||+|+..++.++.. |++.|+++..+|++ +...++..|++++.+|.+
T Consensus 54 ~~~~~~~l~~~la~~~~~~~-~~~v~~~~gg~~al~~~~~~~~~--~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 130 (393)
T 3kgw_A 54 MLQIMEEIKQGIQYVFQTRN-PLTLVVSGSGHCAMETALFNLLE--PGDSFLTGTNGIWGMRAAEIADRIGARVHQMIKK 130 (393)
T ss_dssp HHHHHHHHHHHHHHHHTCCC-SEEEEESCCTTTHHHHHHHHHCC--TTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHHHHHHhCCCC-CcEEEEeCCcHHHHHHHHHhcCC--CCCEEEEEeCCchhHHHHHHHHHcCCceEEEeCC
Confidence 35777889999999999874 33588999999999999988854 89999999988874 477888899999999998
Q ss_pred CCCccCHHHHHHHHHc-CCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCC
Q 011842 215 ISGEIDCADFKAKLLQ-NKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVS 293 (476)
Q Consensus 215 ~~g~~D~~~Le~~l~~-~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~ 293 (476)
.++.+|+++|++++++ +++ +|++++++|++|.+.|+++|.++|++||+ |+++|++|+.+..+ ++
T Consensus 131 ~~~~~d~~~l~~~i~~~~~~---~v~~~~~~nptG~~~~l~~i~~l~~~~~~-----~li~De~~~~g~~~-------~~ 195 (393)
T 3kgw_A 131 PGEHYTLQEVEEGLAQHKPV---LLFLVHGESSTGVVQPLDGFGELCHRYQC-----LLLVDSVASLGGVP-------IY 195 (393)
T ss_dssp TTCCCCHHHHHHHHHHHCCS---EEEEESEETTTTEECCCTTHHHHHHHTTC-----EEEEECTTTTTTSC-------CC
T ss_pred CCCCCCHHHHHHHHhhCCCc---EEEEeccCCcchhhccHHHHHHHHHHcCC-----EEEEECCccccCcc-------cc
Confidence 8889999999999987 555 88888999999999999999999999999 99999999744332 22
Q ss_pred Ccc-cccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCc----cc----------cCC--CCCcccCCCCChhHHHHHH
Q 011842 294 FKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNV----EY----------LAS--RDATIMGSRNGHAPIFLWY 356 (476)
Q Consensus 294 ~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~----~y----------l~~--~~~~~~~sr~~~~~l~~~~ 356 (476)
... .+|+++.++||++++|.++|++++++++++.+.... .+ ... ......++.+......+.+
T Consensus 196 ~~~~~~d~~~~s~sK~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 275 (393)
T 3kgw_A 196 MDQQGIDIMYSSSQKVLNAPPGISLISFNDKAKYKVYSRKTKPVSFYTDITYLAKLWGCEGETRVIHHTTPVTSLYCLRE 275 (393)
T ss_dssp TTTTTCCEEEEESSSTTCCCSSCEEEEECHHHHHHHHTCSSCCSCSTTCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHH
T ss_pred hhhcCCCEEEecCcccccCCCceeEEEECHHHHHHHhccCCCCCceeecHHHHHHhhhhccccCCCCCCCCHHHHHHHHH
Confidence 222 379999999999988899999999998766553211 11 100 0011123333333444556
Q ss_pred HHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCC----eeEEEEecCC---cHHH----h-h-ceeec-----c
Q 011842 357 TLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNEL----SSTVVFERPQ---DEEF----V-R-RWQLA-----C 418 (476)
Q Consensus 357 ~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~----~~iv~f~~~~---~~~~----~-~-~~~l~-----~ 418 (476)
++..+...++++..++..++++++.+.|++.|+....++. ..++.|..+. ..++ . + ++.+. .
T Consensus 276 al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~ 355 (393)
T 3kgw_A 276 SLALIAEQGLENCWRRHREATAHLHKHLQEMGLKFFVKDPEIRLPTITTVTVPAGYNWRDIVSYVLDHFSIEISGGLGPT 355 (393)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSSSSGGGBCSSEEEEECCTTBCHHHHHHHHHHHHCEECBCCCGGG
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCChhhcCCeEEEEeCCCCCCHHHHHHHHHHhCCEEEeCCcccC
Confidence 6666666778999999999999999999998765543322 2455566542 2222 2 2 33332 2
Q ss_pred cCCEEEEEEcC-CCCHHHHHHHHHHHHHHHHHH
Q 011842 419 QGNIAHVVVMP-NVTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 419 ~~~~lRv~~~~-~~T~edid~~~~~l~~~~~~~ 450 (476)
.++.+|+++++ .+|++|+++++++|+++.+++
T Consensus 356 ~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~ 388 (393)
T 3kgw_A 356 EERVLRIGLLGYNATTENVDRVAEALREALQHC 388 (393)
T ss_dssp TTTEEEEECCGGGCCHHHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEEecccCCCHHHHHHHHHHHHHHHHhh
Confidence 35789999844 569999999999999988764
No 31
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.96 E-value=1.3e-26 Score=235.75 Aligned_cols=302 Identities=12% Similarity=0.099 Sum_probs=223.0
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHH--HHHHHcCCeEEEEeCCCC
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVF--KAARMYRMECVKVDCLIS 216 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~--~~~~~~G~~v~~v~~~~~ 216 (476)
....++++++++++|.+++ ..+++|+|||+|+..++.++.. |++.|++++++|.++. ..++..|++++.++.+.+
T Consensus 51 ~~~~~l~~~la~~~~~~~~-~~v~~~~g~t~al~~~~~~~~~--~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 127 (396)
T 2ch1_A 51 RTMDEVKDGLRYIFQTENR-ATMCVSGSAHAGMEAMLSNLLE--EGDRVLIAVNGIWAERAVEMSERYGADVRTIEGPPD 127 (396)
T ss_dssp HHHHHHHHHHHHHHTCCCS-CEEEESSCHHHHHHHHHHHHCC--TTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCTT
T ss_pred HHHHHHHHHHHHHhCCCCC-cEEEECCcHHHHHHHHHHHhcC--CCCeEEEEcCCcccHHHHHHHHHcCCceEEecCCCC
Confidence 5667888899999998753 2489999999999999988765 8999999999999974 577889999999999888
Q ss_pred CccCHHHHHHHHHc-CCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCc
Q 011842 217 GEIDCADFKAKLLQ-NKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFK 295 (476)
Q Consensus 217 g~~D~~~Le~~l~~-~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~ 295 (476)
+.+|+++|++++++ +++ +|++++++|++|.+.|+++|.++|++||+ ++++|++|+.+..+ ++..
T Consensus 128 ~~~d~~~l~~~l~~~~~~---~v~~~~~~nptG~~~~~~~i~~l~~~~~~-----~li~Dea~~~g~~~-------~~~~ 192 (396)
T 2ch1_A 128 RPFSLETLARAIELHQPK---CLFLTHGDSSSGLLQPLEGVGQICHQHDC-----LLIVDAVASLCGVP-------FYMD 192 (396)
T ss_dssp SCCCHHHHHHHHHHHCCS---EEEEESEETTTTEECCCTTHHHHHHHTTC-----EEEEECTTTBTTBC-------CCTT
T ss_pred CCCCHHHHHHHHHhCCCC---EEEEECCCCCCceecCHHHHHHHHHHcCC-----EEEEEccccccCCc-------cchh
Confidence 89999999999987 554 78888999999999999999999999999 99999999844332 2222
Q ss_pred c-cccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCC----ccccCC---------C---CCcccCCCCChhHHHHHHHH
Q 011842 296 K-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSN----VEYLAS---------R---DATIMGSRNGHAPIFLWYTL 358 (476)
Q Consensus 296 ~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~----~~yl~~---------~---~~~~~~sr~~~~~l~~~~~l 358 (476)
. .+|+++.++||++++|.++|+++++++.++.+... ..+..+ . .....++.+......+.+++
T Consensus 193 ~~~~d~~~~s~~K~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al 272 (396)
T 2ch1_A 193 KWEIDAVYTGAQKVLGAPPGITPISISPKALDVIRNRRTKSKVFYWDLLLLGNYWGCYDEPKRYHHTVASNLIFALREAL 272 (396)
T ss_dssp TTTCCEEECCCC-CCCCCSSCEEEEECHHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHH
T ss_pred hcCcCEEEEcCCccccCCCCeEEEEECHHHHHhhhhccCcccceEechHHHHHhhhhhcccCCCCCCCcHHHHHHHHHHH
Confidence 2 27999999999999999999999998876655321 111100 0 01112333323334445566
Q ss_pred HHhChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCC----eeEEEEecC---CcHHH----hh--ceeecc-----cC
Q 011842 359 NRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNEL----SSTVVFERP---QDEEF----VR--RWQLAC-----QG 420 (476)
Q Consensus 359 ~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~----~~iv~f~~~---~~~~~----~~--~~~l~~-----~~ 420 (476)
+.+..+++++..++..++++++.+.|++.|+....++. ..++.|..+ +..++ .+ ++.+.. ..
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~gi~v~~g~~~~~~ 352 (396)
T 2ch1_A 273 AQIAEEGLENQIKRRIECAQILYEGLGKMGLDIFVKDPRHRLPTVTGIMIPKGVDWWKVSQYAMNNFSLEVQGGLGPTFG 352 (396)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCBSSCSGGGBCTTEEEEECCTTCCHHHHHHHHHHHHCBCCBCCCGGGTT
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHHCCCeeccCCccccCCceEEEEcCCCCCHHHHHHHHHHhCCEEEecCccccCC
Confidence 65545678889999999999999999998765443332 136677765 22222 21 333322 34
Q ss_pred CEEEEEEc-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 011842 421 NIAHVVVM-PNVTIDKLDDFLNELIENRSTWYEDGKRQP 458 (476)
Q Consensus 421 ~~lRv~~~-~~~T~edid~~~~~l~~~~~~~~~~~~~~~ 458 (476)
+.+|++++ ..+|++|+++++++|+++.+++.++...+|
T Consensus 353 ~~iRi~~~~~~~~~e~i~~~~~~l~~~l~~~~~~~~~~~ 391 (396)
T 2ch1_A 353 KAWRVGIMGECSTVQKIQFYLYGFKESLKATHPDYIFEE 391 (396)
T ss_dssp TEEEEECCGGGCSHHHHHHHHHHHHHHHHHHCTTCCCC-
T ss_pred CEEEEECCCCcCCHHHHHHHHHHHHHHHHHhCccEEecc
Confidence 78999994 567999999999999999888765555444
No 32
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.95 E-value=3.2e-26 Score=236.29 Aligned_cols=291 Identities=12% Similarity=0.049 Sum_probs=213.8
Q ss_pred HHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCC
Q 011842 138 RQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISG 217 (476)
Q Consensus 138 ~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g 217 (476)
.+.+.++++++++++|.+ ..+++++|++||..++.++.. +++.|+++.+.|.++..+++..|++++.++.
T Consensus 108 ~~~~~~l~~~la~~~g~~----~~i~~~sGs~a~~~al~~l~~--~gd~vl~~~~~h~~~~~~~~~~g~~~~~~~~---- 177 (427)
T 2w8t_A 108 FHDHMEVEQALRDFYGTT----GAIVFSTGYMANLGIISTLAG--KGEYVILDADSHASIYDGCQQGNAEIVRFRH---- 177 (427)
T ss_dssp CHHHHHHHHHHHHHHTCS----EEEEESCHHHHHHHHHHHHSC--TTCEEEEETTCCHHHHHHHHHSCSEEEEECT----
T ss_pred cHHHHHHHHHHHHHhCCC----ceEEecCcHHHHHHHHHHhcC--CCCEEEECCcccHHHHHHHHHcCCeeEEeCC----
Confidence 467778888899999875 267888889999998887754 8999999999999999999999999998885
Q ss_pred ccCHHHHHHHHHcCCC-CcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccc-cccCC-CCCC
Q 011842 218 EIDCADFKAKLLQNKD-KPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPF-VKKAP-KVSF 294 (476)
Q Consensus 218 ~~D~~~Le~~l~~~~~-~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~-~~~~~-~~~~ 294 (476)
+|+++|+++|.+... ++.+|+++.+.+++|.+.|+++|.++|++||+ ++++|++|+++.+.. ..... .++.
T Consensus 178 -~d~~~le~~l~~~~~~~~~~v~~~~~~n~tG~~~~l~~l~~l~~~~g~-----~li~Dea~~~~~~~~~g~~~~~~~~~ 251 (427)
T 2w8t_A 178 -NSVEDLDKRLGRLPKEPAKLVVLEGVYSMLGDIAPLKEMVAVAKKHGA-----MVLVDEAHSMGFFGPNGRGVYEAQGL 251 (427)
T ss_dssp -TCHHHHHHHHHTSCSSSCEEEEEESEETTTTEECCHHHHHHHHHHTTC-----EEEEECTTTTTTSSTTSCCHHHHTTC
T ss_pred -CCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCccCHHHHHHHHHHcCC-----EEEEECCccccccCCCCCchHhhcCC
Confidence 499999999987432 45688888889999999999999999999999 999999998766531 11110 0222
Q ss_pred cccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCC-ccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHH
Q 011842 295 KKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSN-VEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKC 373 (476)
Q Consensus 295 ~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~-~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~ 373 (476)
...+|+++.++||+++ +.+ |++++++++++.+... ..|.. .++.+......+.++++.+. .+++..++.
T Consensus 252 ~~~~di~~~s~sK~~g-~~g-G~v~~~~~l~~~l~~~~~~~~~------~~~~~~~~~aa~~~al~~~~--~~~~~~~~~ 321 (427)
T 2w8t_A 252 EGQIDFVVGTFSKSVG-TVG-GFVVSNHPKFEAVRLACRPYIF------TASLPPSVVATATTSIRKLM--TAHEKRERL 321 (427)
T ss_dssp TTCCSEEEEESSSTTC-SCC-EEEEECCTTGGGGGGTCHHHHS------SCCCCHHHHHHHHHHHHHHT--SCHHHHHHH
T ss_pred CcCCcEEEecchhhhc-cCC-CEEEeCHHHHHHHHHhcccccc------cCCCCHHHHHHHHHHHHHHh--cCHHHHHHH
Confidence 2347999999999998 444 9999988877666432 23322 12222122222334455442 357788899
Q ss_pred HHHHHHHHHHHHhcCCeEeecC-CeeEEEEecCCc---HHHh-----hceeecc--------cCCEEEEEEcCCCCHHHH
Q 011842 374 LRNAHYLKDRLLDAGISAMLNE-LSSTVVFERPQD---EEFV-----RRWQLAC--------QGNIAHVVVMPNVTIDKL 436 (476)
Q Consensus 374 ~~~a~~l~~~L~~~g~~~~~~~-~~~iv~f~~~~~---~~~~-----~~~~l~~--------~~~~lRv~~~~~~T~edi 436 (476)
.+++++|.+.|++.|+....++ .++++.+..++. ..+. +++.+.. ..+.+|++++..+|++||
T Consensus 322 ~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRi~~~~~~t~e~i 401 (427)
T 2w8t_A 322 WSNARALHGGLKAMGFRLGTETCDSAIVAVMLEDQEQAAMMWQALLDGGLYVNMARPPATPAGTFLLRCSICAEHTPAQI 401 (427)
T ss_dssp HHHHHHHHHHHHHHTCEESCSSCCSSEEEEEESSHHHHHHHHHHHHHTTEECEEECTTTSCTTCEEEEEECCTTCCHHHH
T ss_pred HHHHHHHHHHHHHcCCcccCCCCCCCEEEEEECCHHHHHHHHHHHHHCCeEEeeeCCCCCCCCCeEEEEEeCCCCCHHHH
Confidence 9999999999999887554344 567777776642 2222 2333321 135899999999999999
Q ss_pred HHHHHHHHHHHHHHHhcC
Q 011842 437 DDFLNELIENRSTWYEDG 454 (476)
Q Consensus 437 d~~~~~l~~~~~~~~~~~ 454 (476)
++++++|+++.+++.+.+
T Consensus 402 ~~~~~~l~~~l~~~~~~~ 419 (427)
T 2w8t_A 402 QTVLGMFQAAGRAVGVIG 419 (427)
T ss_dssp HHHHHHHHHHHHHHTCC-
T ss_pred HHHHHHHHHHHHHhCccc
Confidence 999999999988765543
No 33
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=99.95 E-value=3.7e-26 Score=232.66 Aligned_cols=296 Identities=13% Similarity=0.060 Sum_probs=215.6
Q ss_pred HHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHh--hCCCcEEEecCCCchHH----HHHHHHcCCeEEEE
Q 011842 138 RQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGRE--VFPDGILYASRESHYSV----FKAARMYRMECVKV 211 (476)
Q Consensus 138 ~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~--~~p~~~Vl~s~~~H~S~----~~~~~~~G~~v~~v 211 (476)
.....++++++++++|.+ +...+++|+|+|+|+..++.+++. ..+++.|++++++|.+. ...++..|++++.+
T Consensus 66 ~~~~~~l~~~la~~~~~~-~~~~v~~~~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~ 144 (406)
T 1kmj_A 66 TEKMENVRKRASLFINAR-SAEELVFVRGTTEGINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVI 144 (406)
T ss_dssp HHHHHHHHHHHHHHTTCS-CGGGEEEESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHHHHHHcCCC-CCCeEEEeCChhHHHHHHHHHhhhhcCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEE
Confidence 456677888899999983 124599999999999999988742 24889999999999764 34567789999999
Q ss_pred eCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCC
Q 011842 212 DCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPK 291 (476)
Q Consensus 212 ~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~ 291 (476)
|.++++.+|+++|++++.++ +.+|++++++|++|.+.|+++|.++|++||+ ++++|++|+.+..+
T Consensus 145 ~~~~~~~~d~~~l~~~l~~~---~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~-----~li~D~~~~~g~~~------- 209 (406)
T 1kmj_A 145 PLNPDGTLQLETLPTLFDEK---TRLLAITHVSNVLGTENPLAEMITLAHQHGA-----KVLVDGAQAVMHHP------- 209 (406)
T ss_dssp CBCTTSCBCGGGHHHHCCTT---EEEEEEESBCTTTCCBCCHHHHHHHHHHTTC-----EEEEECTTTTTTSC-------
T ss_pred ecCCCCCcCHHHHHHHhccC---CeEEEEeCCCccccCcCCHHHHHHHHHHcCC-----EEEEEchhhcCCCC-------
Confidence 99888899999999998654 4588889999999999999999999999999 99999999865432
Q ss_pred CCCcc-cccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCcc---c---c--------CCCCCcc-cCCCCChhHHHHH
Q 011842 292 VSFKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVE---Y---L--------ASRDATI-MGSRNGHAPIFLW 355 (476)
Q Consensus 292 ~~~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~---y---l--------~~~~~~~-~~sr~~~~~l~~~ 355 (476)
++... ..|+++.|+||+++ |.++|++++++++++.+..... | + ......+ .++.+....+++.
T Consensus 210 ~~~~~~~~d~~~~s~~K~~g-~~G~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 288 (406)
T 1kmj_A 210 VDVQALDCDFYVFSGHKLYG-PTGIGILYVKEALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLG 288 (406)
T ss_dssp CCHHHHTCSEEEEEGGGTTS-CTTCEEEEECHHHHHHCCCSSCSTTSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHH
T ss_pred CcccccCCCEEEEEchhccC-CCCcEEEEEeHHHHhhcCCcccCCCceeecccccccccCCCchhccCCCCCHHHHHHHH
Confidence 22222 37999999999885 7779999999887766532210 0 0 0000011 1233222223333
Q ss_pred HHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecC--CeeEEEEecCC--cHHHhh-----ceeecc--------
Q 011842 356 YTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNE--LSSTVVFERPQ--DEEFVR-----RWQLAC-------- 418 (476)
Q Consensus 356 ~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~--~~~iv~f~~~~--~~~~~~-----~~~l~~-------- 418 (476)
++++.+...++++..++..++++++.+.|++.+...+..+ ..+++.|..++ ..++.+ +..+..
T Consensus 289 ~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~ 368 (406)
T 1kmj_A 289 AALEYVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQNRLGVIAFNLGKHHAYDVGSFLDNYGIAVRTGHHCAMPL 368 (406)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTSTTEEEESCTTCCSEEEEEETTCCHHHHHHHHHHTTEECEEECTTCHHH
T ss_pred HHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCcCCEEEEEECCCCHHHHHHHHhhCCcEEEeccccchHH
Confidence 4555554457888899999999999999998733334444 56777777652 233322 232221
Q ss_pred -----cCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 011842 419 -----QGNIAHVVVMPNVTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 419 -----~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~ 450 (476)
..+.+|++++..+|++|+++++++|+++.+.+
T Consensus 369 ~~~~g~~~~iRis~~~~~t~~~i~~~~~~l~~~~~~l 405 (406)
T 1kmj_A 369 MAYYNVPAMCRASLAMYNTHEEVDRLVTGLQRIHRLL 405 (406)
T ss_dssp HHHTTCSCEEEEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCCeEEEEeecCCCHHHHHHHHHHHHHHHHhh
Confidence 13789999999999999999999999987653
No 34
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.95 E-value=6.9e-27 Score=234.38 Aligned_cols=288 Identities=15% Similarity=0.087 Sum_probs=211.4
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchH--HHHHHHHcCCeEEEEeC
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYS--VFKAARMYRMECVKVDC 213 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S--~~~~~~~~G~~v~~v~~ 213 (476)
...++.+++++++++++|.+. ..++++|+|||+|+..++.+... | .+++....|++ +...++..|++++.++.
T Consensus 40 ~~~~~~~~~~~~la~~~g~~~-~~~v~~~~g~t~al~~~~~~l~~--~--~~i~~~~~~~~~~~~~~~~~~g~~~~~v~~ 114 (362)
T 3ffr_A 40 KFEEVYKTASDNLKTLLELPS-NYEVLFLASATEIWERIIQNCVE--K--KSFHCVNGSFSKRFYEFAGELGREAYKEEA 114 (362)
T ss_dssp HHHHHHHHHHHHHHHHTTCCT-TEEEEEESCHHHHHHHHHHHHCS--S--EEEEEECSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHhCCCC-CcEEEEeCCchHHHHHHHHhccC--C--cEEEEcCcHHHHHHHHHHHHhCCCeEEEec
Confidence 456888899999999999863 35689999999999999988764 5 44444556666 44567788999999999
Q ss_pred CCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHh-CCCCCceEEEEecCcccccccccccCCCC
Q 011842 214 LISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEES-GFTQDRFYIHCDGALFGLMMPFVKKAPKV 292 (476)
Q Consensus 214 ~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~-g~~~~~~~lhvD~a~~g~~~~~~~~~~~~ 292 (476)
+.++.+|+++|+ +.+++ .+|++++++|++|.+.|+++|.++|++| |+ |+|+|++|+.+..+ .
T Consensus 115 ~~~~~~d~~~l~--~~~~~---~~v~~~~~~nptG~~~~l~~i~~la~~~p~~-----~li~D~a~~~~~~~-------~ 177 (362)
T 3ffr_A 115 AFGKGFYPADIT--VPADA---EIICLTHNETSSGVSMPVEDINTFRDKNKDA-----LIFVDAVSSLPYPK-------F 177 (362)
T ss_dssp CTTCCCCGGGCC--CCTTC---CEEEEESEETTTTEECCHHHHTTSGGGSTTS-----EEEEECTTTTTSSC-------C
T ss_pred CCCCCCCHHHHh--ccCCc---cEEEEEcCCCCcceeCCHHHHHHHHHhCCCC-----EEEEecccccCCcc-------c
Confidence 888899999998 43334 4888889999999999999999999999 99 99999999765443 2
Q ss_pred CCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCC------ccccCC--------CCCcccCCCCChhHHHHHHHH
Q 011842 293 SFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSN------VEYLAS--------RDATIMGSRNGHAPIFLWYTL 358 (476)
Q Consensus 293 ~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~------~~yl~~--------~~~~~~~sr~~~~~l~~~~~l 358 (476)
+..+ +|+++.++|||+++|.|+|++++++++++.+... ..|... ......++.+......++.++
T Consensus 178 ~~~~-~d~~~~s~~K~~~~~~G~g~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al 256 (362)
T 3ffr_A 178 DWTK-IDSVFFSVQKCFGLPAGLGVWILNDRVIEKSKALLAKRKSIGTYHTIPSMLEKARVNQTPETPNAMNIFLLGKVT 256 (362)
T ss_dssp CTTS-CSEEEEETTSTTCCCSCCEEEEEEHHHHHHHHHHHHTTCCCCSTTSHHHHHHHHTTTCCSSCCCHHHHHHHHHHH
T ss_pred ChhH-CcEEEEecccccCCCCceEEEEECHHHHHHhhhccccCCCCcccccHHHHHHHhhcCCCCCCchHHHHHHHHHHH
Confidence 2222 7999999999999899999999998865544211 111110 001113344434444566666
Q ss_pred HHhChhcHHHHHHHHHHHHHHHHHHHHhc-CCeEeecC----CeeEEEEecCC-cHHHhh-----ceeec-----ccCCE
Q 011842 359 NRKGYKGFQKEVQKCLRNAHYLKDRLLDA-GISAMLNE----LSSTVVFERPQ-DEEFVR-----RWQLA-----CQGNI 422 (476)
Q Consensus 359 ~~~g~~g~~~~~~~~~~~a~~l~~~L~~~-g~~~~~~~----~~~iv~f~~~~-~~~~~~-----~~~l~-----~~~~~ 422 (476)
+.+...+++++.++..++++++.+.|++. |+....++ ...++.|..++ ..++.+ ++.+. ...+.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~g~~~~~~~~ 336 (362)
T 3ffr_A 257 GDMLQISADGIRKQTEEKAALINTYIESSKVFSFGVEDAKLRSMTTIVANTTMLPGEINKILEPFDMAVGAGYGSKKETQ 336 (362)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHHHHHHHHCSSEEESSSCGGGBCSSEEEEEESSCHHHHHHHHGGGTEEEEECSGGGTTTE
T ss_pred HHHHHccHHHHHHHHHHHHHHHHHHHHHccCceeccCChhhcCCceEEEecCCCHHHHHHHHHHCCeEEecCccccCCCE
Confidence 66656678999999999999999999998 54433312 23566666653 333322 33332 13578
Q ss_pred EEEEEcCCCCHHHHHHHHHHHHHH
Q 011842 423 AHVVVMPNVTIDKLDDFLNELIEN 446 (476)
Q Consensus 423 lRv~~~~~~T~edid~~~~~l~~~ 446 (476)
+|++++..+|++||++++++|+++
T Consensus 337 iRis~~~~~~~e~i~~l~~~l~~~ 360 (362)
T 3ffr_A 337 IRIANFPAHSLEQVHKLVQTLKEK 360 (362)
T ss_dssp EEEECCTTSCHHHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHHHH
Confidence 999999999999999999999876
No 35
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.95 E-value=1.1e-26 Score=242.33 Aligned_cols=297 Identities=9% Similarity=-0.037 Sum_probs=219.5
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhh-CCCcEEEecCCCchHH----HHHHHHcCCeE-----
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREV-FPDGILYASRESHYSV----FKAARMYRMEC----- 208 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~-~p~~~Vl~s~~~H~S~----~~~~~~~G~~v----- 208 (476)
.+.+++++++++++|+++ .++++|+|+|+++..++.+.... .+++.|+++.++|.+. ...++..|+++
T Consensus 111 ~~~~~l~~~la~~~g~~~--~~v~~t~g~t~al~~~~~~~~~~~~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~~~v 188 (465)
T 3e9k_A 111 TGDESIVGLMKDIVGANE--KEIALMNALTVNLHLLMLSFFKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLNIEESMR 188 (465)
T ss_dssp GTTHHHHGGGHHHHTCCG--GGEEECSCHHHHHHHHHHHHCCCCSSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHHHEE
T ss_pred HhHHHHHHHHHHHcCCCc--CCEEEECCHHHHHHHHHHHhccccCCCCEEEEcCCcCCchHHHHHHHHHHcCCcceeeeE
Confidence 555678899999999975 35999999999999888887541 1345699999999884 44677789874
Q ss_pred EEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCccccccccccc
Q 011842 209 VKVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKK 288 (476)
Q Consensus 209 ~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~ 288 (476)
..+|.+.++.+|+++|+++|++++.++.+|++++++|++|.+.|+++|.++|++||+ ++++|++|+.+..+
T Consensus 189 ~~~~~~~~~~~d~~~l~~~i~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~la~~~g~-----~vi~D~a~~~g~~~---- 259 (465)
T 3e9k_A 189 MIKPREGEETLRIEDILEVIEKEGDSIAVILFSGVHFYTGQHFNIPAITKAGQAKGC-----YVGFDLAHAVGNVE---- 259 (465)
T ss_dssp EECCCTTCSSCCHHHHHHHHHHHGGGEEEEEEESBCTTTCBBCCHHHHHHHHHHTTC-----EEEEECTTTTTTSC----
T ss_pred EEecCCCCCccCHHHHHHHHHhcCCCeEEEEEeCcccCcceeecHHHHHHHHHHcCC-----EEEEEhhhhcCCcC----
Confidence 345666778999999999998543345688999999999999999999999999999 99999999877665
Q ss_pred CCCCCCcc-cccEEEEcCCCCC-CCCCCceeEEeehhhhhhhcCC-ccccCC---------CCC--------cccCCCCC
Q 011842 289 APKVSFKK-PIGSVSVSGHKFV-GCPMPCGVQITRMEHINVLSSN-VEYLAS---------RDA--------TIMGSRNG 348 (476)
Q Consensus 289 ~~~~~~~~-~~Dsi~~s~hK~l-~~p~~~G~l~~~~~~~~~l~~~-~~yl~~---------~~~--------~~~~sr~~ 348 (476)
++..+ .+|++++++||++ ++|.++|++++++++.+.+... ..|... ... -..++.+.
T Consensus 260 ---~~~~~~~~D~~~~s~~K~l~~gp~~~g~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~ 336 (465)
T 3e9k_A 260 ---LYLHDWGVDFACWCSYKYLNAGAGGIAGAFIHEKHAHTIKPALVGWFGHELSTRFKMDNKLQLIPGVCGFRISNPPI 336 (465)
T ss_dssp ---CCHHHHTCCEEEECSSSTTCCCTTCCCEEEECGGGTTTSCCSSCCGGGBCHHHHTTCCSCCCBCSSGGGGCCSCCCH
T ss_pred ---CchhhcCCCEEEECcccccccCCCceEEEEEcHHHHhhcCCcccCccCCCCCcccccCCCcCcCCChHHhccCCccH
Confidence 33333 3899999999999 4788899999998876544211 111000 000 01234554
Q ss_pred hhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhc-----------CCeEeecC----CeeEEEEecCCc-HHHh-
Q 011842 349 HAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDA-----------GISAMLNE----LSSTVVFERPQD-EEFV- 411 (476)
Q Consensus 349 ~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~-----------g~~~~~~~----~~~iv~f~~~~~-~~~~- 411 (476)
...+++++++..+...+++++.++..++++++.+.|++. |+..+.++ ..+++.|..+.+ ..+.
T Consensus 337 ~~~~a~~aal~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~p~~~~~~g~~~~~~~~~~~~~l~~ 416 (465)
T 3e9k_A 337 LLVCSLHASLEIFKQATMKALRKKSVLLTGYLEYLIKHNYGKDKAATKKPVVNIITPSHVEERGCQLTITFSVPNKDVFQ 416 (465)
T ss_dssp HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCC---------CEEECSCSSGGGBCSCEEEEECCTTCCHHH
T ss_pred HHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCeEEeCCCCHhhcccEEEEEecCCHHHHHH
Confidence 556677788888777789999999999999999999983 44433332 156777766521 1221
Q ss_pred ----hceeecc-cCCEEEEEE-cCCCCHHHHHHHHHHHHHHHHH
Q 011842 412 ----RRWQLAC-QGNIAHVVV-MPNVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 412 ----~~~~l~~-~~~~lRv~~-~~~~T~edid~~~~~l~~~~~~ 449 (476)
+++.+.. ..+.+|+++ +.++|.+||++++++|+++.++
T Consensus 417 ~L~~~Gi~v~~~~~~~iRis~~~~~~t~edi~~~~~~l~~~l~~ 460 (465)
T 3e9k_A 417 ELEKRGVVCDKRNPNGIRVAPVPLYNSFHDVYKFTNLLTSILDS 460 (465)
T ss_dssp HHHTTTEECEEETTTEEEEBCCTTTCCHHHHHHHHHHHHHHHTC
T ss_pred HHHHCCEEEecCCCCEEEEeCcccCCCHHHHHHHHHHHHHHHHh
Confidence 2333332 358999998 8999999999999999988753
No 36
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.95 E-value=3e-26 Score=231.51 Aligned_cols=296 Identities=9% Similarity=0.059 Sum_probs=215.7
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHH--HHHHHcCCeEEEEeC
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVF--KAARMYRMECVKVDC 213 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~--~~~~~~G~~v~~v~~ 213 (476)
...++.+++++++++++|.+.+....++|+|||+|+..++.++.. |++.|+++.+.|++.. ..+...|++++.++.
T Consensus 49 ~~~~~~~~~~~~la~~~g~~~~~~~i~~~~ggt~al~~~~~~~~~--~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~ 126 (376)
T 3f0h_A 49 EFSSTMLENEKFMLEYAKAPEGSKAVFMTCSSTGSMEAVVMNCFT--KKDKVLVIDGGSFGHRFVQLCEIHEIPYVALKL 126 (376)
T ss_dssp HHHHHHHHHHHHHHHHHTCCTTCEEEEESSCHHHHHHHHHHHHCC--TTCCEEEEESSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHhCCCCCceEEEEcCChhHHHHHHHHhccC--CCCeEEEEeCChhhHHHHHHHHHcCCceEEEeC
Confidence 445788899999999999975433455589999999999988865 8999999888776643 456778999999999
Q ss_pred CCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCC
Q 011842 214 LISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVS 293 (476)
Q Consensus 214 ~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~ 293 (476)
+.++.+|+++|++++.++++ +|++++++|++|.+.|+++|+++|++||+ ++++|++|+.+..+ ++
T Consensus 127 ~~~~~~d~~~l~~~~~~~~~---~v~~~~~~nptG~~~~l~~i~~l~~~~~~-----~li~D~~~~~~~~~-------~~ 191 (376)
T 3f0h_A 127 EHGKKLTKEKLYEYDNQNFT---GLLVNVDETSTAVLYDTMMIGEFCKKNNM-----FFVCDCVSAFLADP-------FN 191 (376)
T ss_dssp CTTCCCCHHHHHTTTTSCCC---EEEEESEETTTTEECCHHHHHHHHHHTTC-----EEEEECTTTTTTSC-------CC
T ss_pred CCCCCCCHHHHHHhhccCce---EEEEecccCCcceecCHHHHHHHHHHcCC-----EEEEEcCccccCcc-------cc
Confidence 88889999999998765554 78888899999999999999999999999 99999999866543 22
Q ss_pred Ccc-cccEEEEcCCCCCCCCCCceeEEeehhhhhhhcC--Ccc-ccCCC-------CCcccCCCCChhHHHHHHHHHHhC
Q 011842 294 FKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSS--NVE-YLASR-------DATIMGSRNGHAPIFLWYTLNRKG 362 (476)
Q Consensus 294 ~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~--~~~-yl~~~-------~~~~~~sr~~~~~l~~~~~l~~~g 362 (476)
... .+|+++.++||++++|.|+|++++++++++.+.. ... |+... ......+.+.....++.++++.+.
T Consensus 192 ~~~~~~d~~~~s~~K~l~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~ 271 (376)
T 3f0h_A 192 MNECGADVMITGSQKVLACPPGISVIVLAPRGVERVEKSKVRTMYFDLKDALKNQERGQTPFTPAVGILLQINERLKEIK 271 (376)
T ss_dssp HHHHTCSEEEEETTTTTCCCSSCEEEEECHHHHHHHHTCCCCCSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHH
T ss_pred ccccCccEEEecCcccccCCCceEEEEECHHHHHHhhcCCCCceeecHHHHHhhcccCCCCCCCcHHHHHHHHHHHHHHH
Confidence 222 3799999999999988999999999987665532 111 11100 000111222122244556666665
Q ss_pred hh-cHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCe-eEEEEecC--CcHHH----h-h-ceeec-----ccCCEEEEEE
Q 011842 363 YK-GFQKEVQKCLRNAHYLKDRLLDAGISAMLNELS-STVVFERP--QDEEF----V-R-RWQLA-----CQGNIAHVVV 427 (476)
Q Consensus 363 ~~-g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~-~iv~f~~~--~~~~~----~-~-~~~l~-----~~~~~lRv~~ 427 (476)
.. +++++.++..++++++.+.|++.|+....+..+ .++.+..+ +..++ . + ++.+. ...+.+|+++
T Consensus 272 ~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~~~~~~~lRis~ 351 (376)
T 3f0h_A 272 KHGGADAEVARIASQAADFRAKIKDLPFELVSESPANGVTSVHPTTANAYDIFLKLKDEYGIWICPNGGEMKDTIFRVGH 351 (376)
T ss_dssp HTTHHHHHHHHHHHHHHHHHHHTTTSSEEECCSSBBTTEEEEEESSSCHHHHHHHHHHHSSEECEECCGGGTTTCEEEEC
T ss_pred HhcCHHHHHHHHHHHHHHHHHHHHHcCCccCccccCceEEEEeCCCCCHHHHHHHHHHhCCEEEecCccccCCCEEEEec
Confidence 55 688899999999999999999887544333333 33334322 22222 2 2 33332 1246899999
Q ss_pred cCCCCHHHHHHHHHHHHHHHH
Q 011842 428 MPNVTIDKLDDFLNELIENRS 448 (476)
Q Consensus 428 ~~~~T~edid~~~~~l~~~~~ 448 (476)
+..+|++|+++++++|+++.+
T Consensus 352 ~~~~t~e~i~~~~~~l~~~l~ 372 (376)
T 3f0h_A 352 IGALTHEDNTTLVNAFKDLQK 372 (376)
T ss_dssp CSSCCHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHH
Confidence 999999999999999988764
No 37
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.95 E-value=2.6e-26 Score=230.29 Aligned_cols=295 Identities=13% Similarity=0.087 Sum_probs=212.2
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEE-ecCCCchH-HHHHHHHcCCeEEEEeCCCC
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILY-ASRESHYS-VFKAARMYRMECVKVDCLIS 216 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl-~s~~~H~S-~~~~~~~~G~~v~~v~~~~~ 216 (476)
....++++++++++|.+.+...+++|+|||+|+..++.+++. +++.|+ .+...|.+ +...++..|++++.+|.+.+
T Consensus 37 ~~~~~l~~~la~~~g~~~~~~~v~~~~g~t~a~~~~~~~~~~--~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 114 (366)
T 1m32_A 37 GVVEQIRQQLTALATASEGYTSVLLQGSGSYAVEAVLGSALG--PQDKVLIVSNGAYGARMVEMAGLMGIAHHAYDCGEV 114 (366)
T ss_dssp TTHHHHHHHHHHHHCSSSSEEEEEEESCHHHHHHHHHHHSCC--TTCCEEEEESSHHHHHHHHHHHHHTCCEEEEECCTT
T ss_pred HHHHHHHHHHHHHhCCCCcCcEEEEecChHHHHHHHHHHhcC--CCCeEEEEeCCCccHHHHHHHHHhCCceEEEeCCCC
Confidence 445667777888888332223599999999999999988764 777655 55577876 56778888999999999888
Q ss_pred CccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCcc
Q 011842 217 GEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKK 296 (476)
Q Consensus 217 g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~ 296 (476)
+.+|+++|+++|++++ ++.+|++++++|++|.+.|+++|.++|++||+ ++|+|++|+.+..+ ++...
T Consensus 115 ~~~d~~~l~~~l~~~~-~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~-----~li~Dea~~~~~~~-------~~~~~ 181 (366)
T 1m32_A 115 ARPDVQAIDAILNADP-TISHIAMVHSETTTGMLNPIDEVGALAHRYGK-----TYIVDAMSSFGGIP-------MDIAA 181 (366)
T ss_dssp SCCCHHHHHHHHHHCT-TCCEEEEESEETTTTEECCHHHHHHHHHHHTC-----EEEEECTTTTTTSC-------CCTTT
T ss_pred CCCCHHHHHHHHhcCC-CeEEEEEecccCCcceecCHHHHHHHHHHcCC-----EEEEECCccccCcC-------ccccc
Confidence 8899999999998752 23467788889999999999999999999999 99999999855443 22222
Q ss_pred -cccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCC-ccccCC----------CCCcccCCCCChhHHHHHHHHHHhChh
Q 011842 297 -PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSN-VEYLAS----------RDATIMGSRNGHAPIFLWYTLNRKGYK 364 (476)
Q Consensus 297 -~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~-~~yl~~----------~~~~~~~sr~~~~~l~~~~~l~~~g~~ 364 (476)
.+|+++.++|||+++|.|+|++++++++++.+... ..|... ......++.+......+.++++.+...
T Consensus 182 ~~~di~~~s~~K~~~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~ 261 (366)
T 1m32_A 182 LHIDYLISSANKCIQGVPGFAFVIAREQKLAACKGHSRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKELAKE 261 (366)
T ss_dssp TTCSEEEEESSSTTCCCSSEEEEEEEHHHHTTCTTCCSCSTTCHHHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHH
T ss_pred cCccEEEecCcccccCCCceEEEEECHHHHHhhcCCCCCccccHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHHc
Confidence 37999999999998888999999999877655331 122110 000001233322233455566655445
Q ss_pred c-HHHHHHHHHHHHHHHHHHHHhcCCeEeecC--Ce-eEEEEecCC-----cHHHh-----hceeec----ccCCEEEEE
Q 011842 365 G-FQKEVQKCLRNAHYLKDRLLDAGISAMLNE--LS-STVVFERPQ-----DEEFV-----RRWQLA----CQGNIAHVV 426 (476)
Q Consensus 365 g-~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~--~~-~iv~f~~~~-----~~~~~-----~~~~l~----~~~~~lRv~ 426 (476)
+ +++..++..++++++.+.|++.|+....++ .+ .++.|..+. ..++. +++.+. +..+.+|++
T Consensus 262 g~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~iRi~ 341 (366)
T 1m32_A 262 GGVAARHQRYQQNQRSLVAGMRALGFNTLLDDELHSPIITAFYSPEDPQYRFSEFYRRLKEQGFVIYPGKVSQSDCFRIG 341 (366)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHTTCCBSSCGGGBCSSEEEEECCCCTTCCHHHHHHHHHHTTEECEECCCSSSCEEEEE
T ss_pred cCHhHHHHHHHHHHHHHHHHHHHCCCeeccCchhcCceEEEEEcCccCCCCHHHHHHHHHHCCEEEECCcCCCCCEEEEe
Confidence 5 788899999999999999998876443331 23 366676652 22332 233332 245789999
Q ss_pred EcCCCCHHHHHHHHHHHHHHHH
Q 011842 427 VMPNVTIDKLDDFLNELIENRS 448 (476)
Q Consensus 427 ~~~~~T~edid~~~~~l~~~~~ 448 (476)
++..+|++||++++++|+++.+
T Consensus 342 ~~~~~~~~~i~~~~~~l~~~~~ 363 (366)
T 1m32_A 342 NIGEVYAADITALLTAIRTAMY 363 (366)
T ss_dssp CCSSCCHHHHHHHHHHHHHHCT
T ss_pred cCCCCCHHHHHHHHHHHHHHHH
Confidence 9999999999999999987753
No 38
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.95 E-value=2.4e-26 Score=234.84 Aligned_cols=291 Identities=13% Similarity=0.067 Sum_probs=208.3
Q ss_pred hHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHH-hhCCCcEEEecCCCchHHHHHHHH----cCCeEEEE
Q 011842 137 SRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGR-EVFPDGILYASRESHYSVFKAARM----YRMECVKV 211 (476)
Q Consensus 137 ~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~-~~~p~~~Vl~s~~~H~S~~~~~~~----~G~~v~~v 211 (476)
......++++++++++|.++ ..+++|+|+|+++..++.+.. ...+++.|+++.++|.++...+.. .|++++.+
T Consensus 67 ~~~~~~~l~~~la~~~g~~~--~~v~~~~g~t~al~~~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~v~~v 144 (406)
T 3cai_A 67 SAAVLDAAREAVADLVNADP--GGVVLGADRAVLLSLLAEASSSRAGLGYEVIVSRLDDEANIAPWLRAAHRYGAKVKWA 144 (406)
T ss_dssp HHHHHHHHHHHHHHHHTCCG--GGEEEESCHHHHHHHHHHHTGGGGBTTCEEEEETTSCGGGTHHHHHHHHHHBCEEEEE
T ss_pred HHHHHHHHHHHHHHHhCCCC--CeEEEeCChHHHHHHHHHHHhhccCCCCEEEEcCCccHHHHHHHHHHHHhcCCeEEEE
Confidence 35677788999999999864 359999999999988877652 224889999999999986555443 69999999
Q ss_pred eCC-CCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCC
Q 011842 212 DCL-ISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAP 290 (476)
Q Consensus 212 ~~~-~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~ 290 (476)
|++ +++.+|+++|+++|.++ +.+|++++++|++|.+.|+++|.++|++||+ ++|+|++|+.+..+
T Consensus 145 ~~~~~~~~~d~~~l~~~l~~~---~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~-----~li~D~a~~~g~~~------ 210 (406)
T 3cai_A 145 EVDIETGELPTWQWESLISKS---TRLVAVNSASGTLGGVTDLRAMTKLVHDVGA-----LVVVDHSAAAPYRL------ 210 (406)
T ss_dssp CCCTTTCCCCGGGHHHHCCTT---EEEEEEESBCTTTCBBCCCHHHHHHHHHTTC-----EEEEECTTTTTTCC------
T ss_pred ecCcccCCcCHHHHHHHhCCC---ceEEEEeCCcCCccccCCHHHHHHHHHHcCC-----EEEEEcccccCCCC------
Confidence 998 67889999999999654 3488889999999999999999999999999 99999999854432
Q ss_pred CCCCcc-cccEEEEcCCCCCCCCCCce-eEEeehhhhhhhcCCccccCCC-CCcc-cCCCCChhHHHHHHHHHHhChh--
Q 011842 291 KVSFKK-PIGSVSVSGHKFVGCPMPCG-VQITRMEHINVLSSNVEYLASR-DATI-MGSRNGHAPIFLWYTLNRKGYK-- 364 (476)
Q Consensus 291 ~~~~~~-~~Dsi~~s~hK~l~~p~~~G-~l~~~~~~~~~l~~~~~yl~~~-~~~~-~~sr~~~~~l~~~~~l~~~g~~-- 364 (476)
+++.. .+|+++.|+||+++ |. +| ++++++++++.+.....+.... ...+ .++.+......+.++++.+...
T Consensus 211 -~~~~~~~~d~~~~s~~K~~g-~~-~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~ 287 (406)
T 3cai_A 211 -LDIRETDADVVTVNAHAWGG-PP-IGAMVFRDPSVMNSFGSVSTNPYATGPARLEIGVHQFGLLAGVVASIEYLAALDE 287 (406)
T ss_dssp -CCHHHHCCSEEEEEGGGGTS-CS-CEEEEESCHHHHHTSCCCCSCTTCCGGGGGCCSCCCHHHHHHHHHHHHHHHTSST
T ss_pred -CCchhcCCCEEEeehhhhcC-CC-cCeEEEEehHHHhhcCCcccCCCCCccccccCCCccHHHHHHHHHHHHHHHHhcc
Confidence 22222 37999999999886 54 88 9999988766554322111110 0011 2333322222344455544222
Q ss_pred ------------cHHHHHHHHHHHHHHHHHHHHhcCCeEeecC---CeeEEEEecCC--cHHHh-----hceeecc----
Q 011842 365 ------------GFQKEVQKCLRNAHYLKDRLLDAGISAMLNE---LSSTVVFERPQ--DEEFV-----RRWQLAC---- 418 (476)
Q Consensus 365 ------------g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~---~~~iv~f~~~~--~~~~~-----~~~~l~~---- 418 (476)
.+++..++..++++++.+.|++.+...+..+ ..+++.|..++ ..++. +++.+..
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gi~v~~g~~~ 367 (406)
T 3cai_A 288 SARGSRRERLAVSMQSADAYLNRVFDYLMVSLRSLPLVMLIGRPEAQIPVVSFAVHKVPADRVVQRLADNGILAIANTGS 367 (406)
T ss_dssp TCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEEECCCCSSBCSEEEEEETTBCHHHHHHHHHHTTEECEECCSC
T ss_pred ccccchhhhhhhhHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCccccCCEEEEEECCcCHHHHHHHHHHCCcEEecCChH
Confidence 3678888899999999999998743334333 24567777653 23332 2333321
Q ss_pred ----------cCCEEEEEEcCCCCHHHHHHHHHHHHHH
Q 011842 419 ----------QGNIAHVVVMPNVTIDKLDDFLNELIEN 446 (476)
Q Consensus 419 ----------~~~~lRv~~~~~~T~edid~~~~~l~~~ 446 (476)
..+.+|++++..+|++||++++++|+++
T Consensus 368 ~~~~~~g~~~~~~~iRis~~~~~t~e~i~~~~~~l~~~ 405 (406)
T 3cai_A 368 RVLDVLGVNDVGGAVTVGLAHYSTMAEVDQLVRALASL 405 (406)
T ss_dssp HHHHHHTTTTTTCCEEEECCTTCCHHHHHHHHHHHHTC
T ss_pred HHHHHcCCCCCCCeEEEEeecCCCHHHHHHHHHHHHHh
Confidence 1368999999999999999999998753
No 39
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.95 E-value=2.4e-26 Score=232.58 Aligned_cols=362 Identities=13% Similarity=0.058 Sum_probs=245.6
Q ss_pred ccCCCCCcHHHHHHHHHHHHhcccccccCCCCcCCc------chHHHHHHHH----HhhCCCCCCcccCccchhhHH---
Q 011842 73 FTGDKEAYMAGVLARYRKTLMERTKHHLGYPYNLDF------DYGALAQLQH----FSINNLGDPFIESNYGVHSRQ--- 139 (476)
Q Consensus 73 ~~~~~~~~~~~il~~~~~~~~~~~~~~~g~p~~~~~------~~~~l~~~l~----~~~n~~g~~~~~~~~~~~~~~--- 139 (476)
.+||.|-.-+.|---+.+.-...+++ +|.+.+. .++.+..--. .++...|+-....|-..++.-
T Consensus 40 ~~P~~g~~d~~ie~~l~~la~mdsnn---~~~~~g~GERE~Rv~s~lv~rrh~~~~HGiGRSGd~~~~QPKAaGssll~~ 116 (501)
T 3hl2_A 40 KCPENGWDESTLELFLHELAIMDSNN---FLGNCGVGEREGRVASALVARRHYRFIHGIGRSGDISAVQPKAAGSSLLNK 116 (501)
T ss_dssp CCCSSCCCHHHHHHHHHHHHTTBGGG---CSSCCCCSSCCCCCSCHHHHHHTTTCCSCBSCSSCTTCCCTTBHHHHHHHH
T ss_pred CCCccCCCHHHHHHHHHHHHhhccCC---CcccCCcccchHHHHHHHHHhhccCcccCCCCccccccCCCCccchHHHHH
Confidence 67888877666655555554444543 4554432 2333322222 333455555555554444432
Q ss_pred -HHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHh-hCCC-cEEEecCCCchHHHHHHHHcCCeEEEEeC---
Q 011842 140 -FEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGRE-VFPD-GILYASRESHYSVFKAARMYRMECVKVDC--- 213 (476)
Q Consensus 140 -le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~-~~p~-~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~--- 213 (476)
-+..+.+|++.+ |++.. ...++++|+|.+++..++++.. ..|+ +.||+++..|.|+.+++.++|+++++|+.
T Consensus 117 ltn~l~ld~L~~~-G~~~~-~~~flVnGsTgg~lamilaa~r~~rpg~d~VIvpRn~HKSv~kAliL~Gl~Pv~V~p~~d 194 (501)
T 3hl2_A 117 ITNSLVLDIIKLA-GVHTV-ANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMITAGFEPVVIENVLE 194 (501)
T ss_dssp HHHHHHHHHHHHT-TCTTC-CEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECEEEE
T ss_pred HHHHHHHHHHHHc-CCCCC-CcEEEECcHHHHHHHHHHHHcCcccCCCCEEEEecchHHHHHHHHHHcCCeEEEEeeeec
Confidence 355577898887 99853 4578889999888776666544 2344 89999999999999999999999999876
Q ss_pred CCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCc-cccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCC
Q 011842 214 LISGEIDCADFKAKLLQNKDKPAIINVNIGTTV-KGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKV 292 (476)
Q Consensus 214 ~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~-tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~ 292 (476)
++...+|++.|+++|++++...+.++++.++++ .+.++||++|+++|++||+ ++|||+|||+...+... .+.-
T Consensus 195 ~~~~~id~e~le~aI~e~ga~~i~~V~~Ttt~y~p~~~ddI~eIaeIch~~gI-----pllVDeAhGah~~~~~~-lp~s 268 (501)
T 3hl2_A 195 GDELRTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVPDRLEELAVICANYDI-----PHIVNNAYGVQSSKCMH-LIQQ 268 (501)
T ss_dssp TTEEEECHHHHHHHHHHHCGGGEEEEEEECSCCTTBCCCCHHHHHHHHHHHTC-----CEEEECTTCTTCHHHHH-HHHH
T ss_pred ccccCCCHHHHHHHHHhcCCCcEEEEEecCCCCCCcccccHHHHHHHHHHcCC-----eEEEeCcchhhhhhhhh-hHHH
Confidence 345789999999999987433445555544444 4577999999999999999 99999999986543211 1111
Q ss_pred CCccc-ccEEEEcCCCCCCCCCCceeEEeehh-hhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHH
Q 011842 293 SFKKP-IGSVSVSGHKFVGCPMPCGVQITRME-HINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEV 370 (476)
Q Consensus 293 ~~~~~-~Dsi~~s~hK~l~~p~~~G~l~~~~~-~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~ 370 (476)
.+..+ +|+++.|.||++++|.++++++.+++ +++.+. ..| .|++++.+++.+|+++..+|.+||++++
T Consensus 269 A~~~GrAD~vVqS~HK~llvpIGG~ii~~~d~e~l~~~~--~~y--------PGr~S~Spsldl~~tLL~lGr~Gy~~ll 338 (501)
T 3hl2_A 269 GARVGRIDAFVQSLDKNFMVPVGGAIIAGFNDSFIQEIS--KMY--------PGRASASPSLDVLITLLSLGSNGYKKLL 338 (501)
T ss_dssp HHHHSCCCEEEEEHHHHHCCCSSCEEEEESCHHHHHHHH--HTS--------CSCBCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCcEEEecccccceeecCceEEEeCCHHHHHHHH--HhC--------CCCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 11223 99999999999999999888888765 454442 233 3666778899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhc----CCeEee---cCCeeEEEEecCCc------HH-----Hhhce---ee-ccc---------
Q 011842 371 QKCLRNAHYLKDRLLDA----GISAML---NELSSTVVFERPQD------EE-----FVRRW---QL-ACQ--------- 419 (476)
Q Consensus 371 ~~~~~~a~~l~~~L~~~----g~~~~~---~~~~~iv~f~~~~~------~~-----~~~~~---~l-~~~--------- 419 (476)
+++.++++||.++|++. |-.++. +|.+.-+.+..... .. |.+.. ++ +..
T Consensus 339 ~e~~ela~~L~~~L~~la~~~ge~ll~~~~n~is~a~tl~~~~~~~~~~~t~~gs~Lf~r~vsG~Rvv~~~~~~~i~g~~ 418 (501)
T 3hl2_A 339 KERKEMFSYLSNQIKKLSEAYNERLLHTPHNPISLAMTLKTLDEHRDKAVTQLGSMLFTRQVSGARVVPLGSMQTVSGYT 418 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCCBCCCTTCSSEEEEECTTSCTTTSCHHHHHHHHHHHTTCCSCEEECTTCCEEETTEE
T ss_pred HHHHHHHHHHHHHHHHHHHhcChhhcCCCCCceeEEEecccccccccccHHHHHHHHHhcCCCcceeecCCCceEECCee
Confidence 99999999999999984 433332 22233333322111 01 11111 11 110
Q ss_pred ------------CCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhcCC
Q 011842 420 ------------GNIAHVVVMPNVTIDKLDDFLNELIENRSTWYEDGK 455 (476)
Q Consensus 420 ------------~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~~~~~ 455 (476)
..++-+.....+|++|||.|+..|+++..++.+...
T Consensus 419 f~~~g~h~~~~~~~yl~~a~aiG~~~~~v~~~~~~l~~~~~~~~~~~~ 466 (501)
T 3hl2_A 419 FRGFMSHTNNYPCAYLNAASAIGMKMQDVDLFIKRLDRCLKAVRKERS 466 (501)
T ss_dssp ESSTTTTSSCCSSCEEEEECCTTCCHHHHHHHHHHHHHHHHHHHC---
T ss_pred ecCcccCCCCCCchHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhhc
Confidence 145666777888999999999999999988865433
No 40
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=99.95 E-value=9.4e-26 Score=229.12 Aligned_cols=292 Identities=10% Similarity=0.047 Sum_probs=213.4
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCC
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLI 215 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~ 215 (476)
+..++++++.+++.+.+|++.+..++++|+|||+|+..++.++.. |++.|++++++|.++...++..|++++.+|.++
T Consensus 68 g~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~--~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~ 145 (388)
T 1j32_A 68 GEPRLREAIAQKLQRDNGLCYGADNILVTNGGKQSIFNLMLAMIE--PGDEVIIPAPFWVSYPEMVKLAEGTPVILPTTV 145 (388)
T ss_dssp CCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCC--TTCEEEEESSCCTHHHHHHHHTTCEEEEECCCG
T ss_pred CCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhcC--CCCEEEEcCCCChhHHHHHHHcCCEEEEecCCc
Confidence 356999999999999999764445799999999999999988855 899999999999999999999999999999875
Q ss_pred --CCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccc---cCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCC
Q 011842 216 --SGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAV---DDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAP 290 (476)
Q Consensus 216 --~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~i---d~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~ 290 (476)
++.+|+++|++++.++ +.+|++++++|++|.+ +++++|+++|++||+ ++++|++|+++.+......+
T Consensus 146 ~~~~~~d~~~l~~~l~~~---~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~-----~li~De~~~~~~~~~~~~~~ 217 (388)
T 1j32_A 146 ETQFKVSPEQIRQAITPK---TKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGL-----WVLSDEIYEKILYDDAQHLS 217 (388)
T ss_dssp GGTTCCCHHHHHHHCCTT---EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTC-----EEEEECTTTTCBCTTCCCCC
T ss_pred ccCCCCCHHHHHHhcCcC---ceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCC-----EEEEEccchhcccCCCCCCC
Confidence 5679999999998654 3477788899999998 459999999999999 99999999876543221111
Q ss_pred CCCCc---ccccEEEEcCCCCCC-CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHh--Chh
Q 011842 291 KVSFK---KPIGSVSVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRK--GYK 364 (476)
Q Consensus 291 ~~~~~---~~~Dsi~~s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~--g~~ 364 (476)
...+. ...|+++.++||+++ .++++|++++++++++.+.....+. ..+ ...+.+++++..+ +.+
T Consensus 218 ~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~-------~~~---~~~~~~~a~~~~l~~~~~ 287 (388)
T 1j32_A 218 IGAASPEAYERSVVCSGFAKTYAMTGWRVGFLAGPVPLVKAATKIQGHS-------TSN---VCTFAQYGAIAAYENSQD 287 (388)
T ss_dssp GGGSCHHHHHTEEEEEESTTTTTCTTTCCEEEECCHHHHHHHHHHHHTT-------TCS---CCHHHHHHHHHHHHSCSH
T ss_pred HHHccccccCCEEEEeechhccCCcccceEEEEeCHHHHHHHHHHHhhc-------ccC---CCHHHHHHHHHHHhCCcH
Confidence 12222 237899999999996 5577999999988765553211110 011 1234444444444 344
Q ss_pred cHHHHHHHHHHHHHHHHHHHHhc-CCeEeecCCeeE-EEEecC----CcHHH----h--hceeecc-----cCCEEEEEE
Q 011842 365 GFQKEVQKCLRNAHYLKDRLLDA-GISAMLNELSST-VVFERP----QDEEF----V--RRWQLAC-----QGNIAHVVV 427 (476)
Q Consensus 365 g~~~~~~~~~~~a~~l~~~L~~~-g~~~~~~~~~~i-v~f~~~----~~~~~----~--~~~~l~~-----~~~~lRv~~ 427 (476)
.+++..++..++++++.+.|++. ++. +..+..+. +.+..+ +..++ . +++.+.. ..+.+|+++
T Consensus 288 ~~~~~~~~~~~~~~~l~~~L~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~ 366 (388)
T 1j32_A 288 CVQEMLAAFAERRRYMLDALNAMPGLE-CPKPDGAFYMFPSIAKTGRSSLDFCSELLDQHQVATVPGAAFGADDCIRLSY 366 (388)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCTTCB-CCCCCBTTEECCBCGGGTCCHHHHHHHHHHHHCEECEEGGGGTCTTBEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCCc-ccCCCeeEEEEEecCCCCCCHHHHHHHHHHhCCEEEeChhhhCCCCcEEEEe
Confidence 57788889999999999999987 554 33444333 333332 22222 2 2444422 147899987
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHH
Q 011842 428 MPNVTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 428 ~~~~T~edid~~~~~l~~~~~~~ 450 (476)
. +|+++|+.+++.|+++.+++
T Consensus 367 ~--~~~~~i~~~~~~l~~~l~~~ 387 (388)
T 1j32_A 367 A--TDLDTIKRGMERLEKFLHGI 387 (388)
T ss_dssp C--SCHHHHHHHHHHHHHHHHHH
T ss_pred c--CCHHHHHHHHHHHHHHHHHh
Confidence 5 79999999999999887654
No 41
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.95 E-value=6e-26 Score=230.60 Aligned_cols=295 Identities=13% Similarity=0.051 Sum_probs=216.6
Q ss_pred hhhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHH--HHHHHHcCC--eEEE
Q 011842 135 VHSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSV--FKAARMYRM--ECVK 210 (476)
Q Consensus 135 ~~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~--~~~~~~~G~--~v~~ 210 (476)
....++.+++++++++++|.+ ...++|+|||+|+..++..+ . +++.|++.+..|++. ...++..|+ +++.
T Consensus 31 ~~~~~~~~~~~~~l~~~~~~~---~~v~~~~sgt~a~~~~~~~~-~--~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~~~ 104 (379)
T 3ke3_A 31 KAFQEVMNDLLSNLKTVYNAE---AAVIIPGSGTYGMEAVARQL-T--IDEDCLIIRNGWFSYRWTQILEKGKFAKSSTV 104 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHTCS---EEEEEESCHHHHHHHHHHHH-C--TTCEEEEEECSHHHHHHHHHHHHHCCSSEEEE
T ss_pred HHHHHHHHHHHHHHHHHhCCC---CEEEEcCChhHHHHHHHHhC-C--CCCeEEEEeCCchhHHHHHHHHHhCCCCceEE
Confidence 345688889999999999987 24888999999999876543 3 899999999999874 345566664 7788
Q ss_pred EeCCCC---------CccCHHHHHHHHHc-CCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecC
Q 011842 211 VDCLIS---------GEIDCADFKAKLLQ-NKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGA 277 (476)
Q Consensus 211 v~~~~~---------g~~D~~~Le~~l~~-~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a 277 (476)
++.+.. +.+|+++|+++|.+ +++ +|+++++.|++|.+.| +++|+++|++||+ ++|+|++
T Consensus 105 ~~~~~~g~~~~~~~~~~~d~~~l~~~i~~~~~~---~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~-----~li~D~~ 176 (379)
T 3ke3_A 105 LTAERTEDTEAPKPFAPVDIETAVAKIKEDKSA---IVYAPHVETSSGIILSEEYIKALSEAVHSVGG-----LLVIDCI 176 (379)
T ss_dssp EECEESSCCSSCCCEECCCHHHHHHHHHHHTCS---EEEEESEETTTTEECCHHHHHHHHHHHHHTTC-----EEEEECT
T ss_pred EeccccccccccCCCCCCCHHHHHHHHhhcCCc---EEEEEeecCCCceeCCHHHHHHHHHHHHHcCC-----EEEEEec
Confidence 876432 26899999999964 554 7888888999999999 9999999999999 9999999
Q ss_pred cccccccccccCCCCCCcc-cccEEEEcCCCCCCCCCCceeEEeehhhhhhhcC--CccccCC-------------CCCc
Q 011842 278 LFGLMMPFVKKAPKVSFKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSS--NVEYLAS-------------RDAT 341 (476)
Q Consensus 278 ~~g~~~~~~~~~~~~~~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~--~~~yl~~-------------~~~~ 341 (476)
++ +..+ ++... .+|++++++|||+++|.++|++++++++++.+.. ...|... ....
T Consensus 177 ~~-g~~~-------~~~~~~~~d~~~~s~~K~l~~~~g~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 248 (379)
T 3ke3_A 177 AS-GCVW-------LDMKELGIDVLISAPQKGWSSTPCAGLVMLSAAAIKKVESTESNCFSLDLKQWLTIMRAYENGGHA 248 (379)
T ss_dssp TC-TTCC-------CCHHHHTCSEEEECTTTTTCSCCCEEEEEECHHHHHHHHTCCCSCSTTCHHHHHHHHHHHHTTSCC
T ss_pred cc-CCcc-------ccccccCCCEEEecchhhcCCCCceEEEEECHHHHHhhhcCCCCceeecHHHHHHHHHhhhccCCC
Confidence 87 4333 33333 4899999999999999999999999987665532 1222110 0111
Q ss_pred ccCCCCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCC--ee-EEEEecCCcHH-----H-hh
Q 011842 342 IMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNEL--SS-TVVFERPQDEE-----F-VR 412 (476)
Q Consensus 342 ~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~--~~-iv~f~~~~~~~-----~-~~ 412 (476)
+.++.+.....++.++++.+..+|++++.++..+++++|++.|++.|+..+.++. ++ ++.+..++... + .+
T Consensus 249 ~~~t~~~~~~~a~~aal~~~~~~g~~~~~~~~~~l~~~l~~~l~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~L~~~ 328 (379)
T 3ke3_A 249 YHATMPTDSLRQFRDAILEAKEIGFDILRDAQWELGNRVRKVLTDKGIESVAAEGFEAPGVVVSYTERDDMHKGSAFAEA 328 (379)
T ss_dssp CSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCBSBCTTCBCSSEEEEECSCHHHHSSHHHHHT
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHcCCEecCCccccCceEEEEccCCcchHHHHHHHHC
Confidence 2234443444455567777666788999999999999999999999876654432 34 34444433211 1 12
Q ss_pred ceeecc----------cCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 011842 413 RWQLAC----------QGNIAHVVVMPNVTIDKLDDFLNELIENRSTWY 451 (476)
Q Consensus 413 ~~~l~~----------~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~ 451 (476)
++.+.. .++.+|++++.++|++|||+++++|+++.+++.
T Consensus 329 Gi~v~~g~~~~~~~~~~~~~lRis~~~~~t~~di~~~~~~l~~~l~~~~ 377 (379)
T 3ke3_A 329 GLQIAAGVPLKVGEPDNFKTFRLGLFGLDKLTDIDGTVERFEKALDEVL 377 (379)
T ss_dssp TCCCEECCCCSSCCCTTCCEEEEECCSHHHHTCHHHHHHHHHHHHHHHH
T ss_pred CeEEeCCccccccccCcCCEEEEeCCcCCCHHHHHHHHHHHHHHHHHhc
Confidence 333321 157899999999999999999999999887764
No 42
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.95 E-value=1.4e-26 Score=233.21 Aligned_cols=287 Identities=16% Similarity=0.134 Sum_probs=212.9
Q ss_pred HHHHHHHHH-HHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEe--CCC
Q 011842 139 QFEVGVLDW-FARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVD--CLI 215 (476)
Q Consensus 139 ~le~~~~~~-la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~--~~~ 215 (476)
....+++++ +++++|.+ .+++|+|+|+|+..++.++.. |++.|++++++|+++..+++..|++++.+| .++
T Consensus 53 ~~~~~l~~~~la~~~~~~----~v~~~~g~t~a~~~~~~~~~~--~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 126 (371)
T 2e7j_A 53 PPIHDFIHNQLPKFLGCD----VARVTNGAREAKFAVMHSLAK--KDAWVVMDENCHYSSYVAAERAGLNIALVPKTDYP 126 (371)
T ss_dssp CCHHHHHHTHHHHHTTSS----EEEEESSHHHHHHHHHHHHCC--TTCEEEEETTCCHHHHHHHHHTTCEEEEECCCCTT
T ss_pred HHHHHHHHHHHHHHcCCC----EEEEeCChHHHHHHHHHHHhC--CCCEEEEccCcchHHHHHHHHcCCeEEEeecccCC
Confidence 455677788 88899986 499999999999999998854 899999999999999999999999999999 887
Q ss_pred CCccCHHHHHHHHHcCC--CCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCC
Q 011842 216 SGEIDCADFKAKLLQNK--DKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVS 293 (476)
Q Consensus 216 ~g~~D~~~Le~~l~~~~--~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~ 293 (476)
++.+|+++|++++.+.. .++.+|++++++|++|.+.|+++|.++|++||+ ++|+|++|+.+..+ ++
T Consensus 127 ~~~~d~~~l~~~l~~~~~~~~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~-----~li~D~a~~~~~~~-------~~ 194 (371)
T 2e7j_A 127 DYAITPENFAQTIEETKKRGEVVLALITYPDGNYGNLPDVKKIAKVCSEYDV-----PLLVNGAYAIGRMP-------VS 194 (371)
T ss_dssp TCCCCHHHHHHHHHHHTTTSCEEEEEEESSCTTTCCCCCHHHHHHHHHTTTC-----CEEEECTTTBTTBC-------CC
T ss_pred CCCcCHHHHHHHHHhhcccCCeEEEEEECCCCCCcccCCHHHHHHHHHHcCC-----eEEEECccccCCCC-------CC
Confidence 89999999999997421 234588889999999999999999999999999 99999999876543 22
Q ss_pred Ccc-cccEEEEcCCCCCCCCCCceeEEeehhhhhh-hcCCcc-ccCCCCCcc-cCCCCChhHHHHHHHHHHhChhcHHHH
Q 011842 294 FKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINV-LSSNVE-YLASRDATI-MGSRNGHAPIFLWYTLNRKGYKGFQKE 369 (476)
Q Consensus 294 ~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~-l~~~~~-yl~~~~~~~-~~sr~~~~~l~~~~~l~~~g~~g~~~~ 369 (476)
... .+|+++.|+||++++|.++|++++++++++. +..... +... ..+ .++.+......+.++++.+.. +.
T Consensus 195 ~~~~~~di~~~s~sK~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~~~~l~~~~~----~~ 268 (371)
T 2e7j_A 195 LKEIGADFIVGSGHKSMAASGPIGVMGMKEEWAEIVLRRSEKYKNKE--VELLGCTARGATIITLMASFPHVRE----RI 268 (371)
T ss_dssp HHHHTCSEEEEEHHHHSSCCSSCEEEEECTTTTTTTTCBCSSCTTSB--GGGTTCCCCSHHHHHHHHHHHHHHH----HG
T ss_pred hhhcCCCEEEecCCcCCCCCCCcEEEEEechhhhhhccccccCcccc--cccccCCcCHHHHHHHHHHHHHHHH----HH
Confidence 222 3789999999999989999999999887665 532211 1110 000 233332323333344444321 56
Q ss_pred HHHH--HHHHHHHHHHHHhcCCeEeecC--CeeEEEEecCCcHHHhhce-----ee-c----c---c--CCEEE-EEEcC
Q 011842 370 VQKC--LRNAHYLKDRLLDAGISAMLNE--LSSTVVFERPQDEEFVRRW-----QL-A----C---Q--GNIAH-VVVMP 429 (476)
Q Consensus 370 ~~~~--~~~a~~l~~~L~~~g~~~~~~~--~~~iv~f~~~~~~~~~~~~-----~l-~----~---~--~~~lR-v~~~~ 429 (476)
.++. .++++++.+.|++.++....++ ..+++.+..++..++.+.+ .+ + . . .+.+| ++++.
T Consensus 269 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~g~~~~~iRii~~~~ 348 (371)
T 2e7j_A 269 KRWDEEVEKARRFAAEMEKLGIKQLGDNPHNHDLMFFHAEVLYEISKKAKGGRFFLYRELKSRKIHGIKPGLTRYFKLST 348 (371)
T ss_dssp GGHHHHHHHHHHHHHHHHHTTCEEESSSSCCSSEEEEECHHHHHHHHHSSSGGGHHHHHHHHTTEECSCTTCCSEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHcCcEEecCCCccCceEEEECCCHHHHHHHHHHCCEEEEeccccccccCCCCCceEEEEeec
Confidence 6677 8899999999998876554433 3567777765222332221 11 1 0 1 46789 99998
Q ss_pred C-CCHHHHHHHHHHHHHHHHH
Q 011842 430 N-VTIDKLDDFLNELIENRST 449 (476)
Q Consensus 430 ~-~T~edid~~~~~l~~~~~~ 449 (476)
. +|++++++++++|+++.++
T Consensus 349 ~~~~~~~i~~~~~~l~~~~~~ 369 (371)
T 2e7j_A 349 YGLSDEEVDYVLNAFKEIIEK 369 (371)
T ss_dssp TTCCHHHHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHHHh
Confidence 8 9999999999999988754
No 43
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.95 E-value=6.1e-26 Score=230.02 Aligned_cols=290 Identities=13% Similarity=0.091 Sum_probs=213.0
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHH----HHHHcCCeEEEEeCC
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFK----AARMYRMECVKVDCL 214 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~----~~~~~G~~v~~v~~~ 214 (476)
....++++.+++++|.+++ .+++|+|||+|+..++.+++ ..+++.|+++.++|.++.. .++..|++++.+|.+
T Consensus 59 ~~~~~l~~~la~~~g~~~~--~v~~~~g~t~a~~~~~~~~~-~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 135 (390)
T 1elu_A 59 QLIAQLRQALAETFNVDPN--TITITDNVTTGCDIVLWGLD-WHQGDEILLTDCEHPGIIAIVQAIAARFGITYRFFPVA 135 (390)
T ss_dssp HHHHHHHHHHHHHTTSCGG--GEEEESSHHHHHHHHHHHSC-CCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCG
T ss_pred HHHHHHHHHHHHHcCCCHH--HEEEeCChHHHHHHHHhCCC-CCCCCEEEEecCcccHHHHHHHHHHHHhCcEEEEEcCC
Confidence 4566777888888998643 59999999999999988873 1388999999999998654 357789999999987
Q ss_pred --CCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHH----HhCCCCCceEEEEecCccccccccccc
Q 011842 215 --ISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLE----ESGFTQDRFYIHCDGALFGLMMPFVKK 288 (476)
Q Consensus 215 --~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~----~~g~~~~~~~lhvD~a~~g~~~~~~~~ 288 (476)
.++.+|+++|+++|.++ +.+|++++++|++|.+.|+++|.++|+ +||+ ++++|++|+.+..+
T Consensus 136 ~~~~~~~d~~~l~~~i~~~---~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~-----~li~Dea~~~g~~~---- 203 (390)
T 1elu_A 136 ATLNQGDAAAVLANHLGPK---TRLVILSHLLWNTGQVLPLAEIMAVCRRHQGNYPV-----RVLVDGAQSAGSLP---- 203 (390)
T ss_dssp GGSSSSCHHHHHHTTCCTT---EEEEEEESBCTTTCCBCCHHHHHHHHHHCCSSSCC-----EEEEECTTTBTTBC----
T ss_pred CCCCccchHHHHHHhcCCC---ceEEEEeccccCCceecCHHHHHHHHhhhhhhcCc-----EEEEEcccccCCcC----
Confidence 57889999999988654 458888999999999999999999999 9999 99999999854332
Q ss_pred CCCCCCcc-cccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCc-c------------ccCCC-CCcc-cCCCCChhHH
Q 011842 289 APKVSFKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNV-E------------YLASR-DATI-MGSRNGHAPI 352 (476)
Q Consensus 289 ~~~~~~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~-~------------yl~~~-~~~~-~~sr~~~~~l 352 (476)
++... .+|+++.|+|||+++|+++|++++++++++.+.... . |.... ...+ .++.+.....
T Consensus 204 ---~~~~~~~~d~~~~s~~K~~~~~~g~G~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (390)
T 1elu_A 204 ---LDFSRLEVDYYAFTGHKWFAGPAGVGGLYIHGDCLGEINPTYVGWRSITYGAKGEPTGWAEGGKRFEVATSAYPQYA 280 (390)
T ss_dssp ---CCTTTSCCSEEEEESSSTTCCCTTCEEEEECTTTGGGCCCCSCCTTTEEECTTSCEEEECSGGGGGCCSCCCHHHHH
T ss_pred ---CChhhcCCCEEEccccccccCCCceEEEEECHHhHhhcCCccccCCcccccccCcccccccchHhhCCCCCCHHHHH
Confidence 22222 379999999999999999999999988766553211 0 00000 0011 2333323334
Q ss_pred HHHHHHHHhChhc-HHHHHHHHHHHHHHHHHHHHhc-CCeEeec--CCeeEEEEecCC---cHHHhh-----ceeeccc-
Q 011842 353 FLWYTLNRKGYKG-FQKEVQKCLRNAHYLKDRLLDA-GISAMLN--ELSSTVVFERPQ---DEEFVR-----RWQLACQ- 419 (476)
Q Consensus 353 ~~~~~l~~~g~~g-~~~~~~~~~~~a~~l~~~L~~~-g~~~~~~--~~~~iv~f~~~~---~~~~~~-----~~~l~~~- 419 (476)
.+.++++.+...+ +++..++..++++++.+.|++. |+....+ ...+++.|..+. ..++.+ ++.+...
T Consensus 281 a~~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~ 360 (390)
T 1elu_A 281 GLLAALQLHQRQGTAEERYQAICQRSEFLWRGLNQLPHVHCLATSAPQAGLVSFTVDSPLGHRAIVQKLEEQRIYLRTIA 360 (390)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSTTEEESCSSCCSSSEEEEEECSSSCHHHHHHHHHHTTEECEEET
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhcCCcEEecCccccccEEEEEcCCCCCHHHHHHHHHHCCEEEEecC
Confidence 4556666654445 8889999999999999999997 5443332 245677777642 233322 2333222
Q ss_pred -CCEEEEEEcCCCCHHHHHHHHHHHHHH
Q 011842 420 -GNIAHVVVMPNVTIDKLDDFLNELIEN 446 (476)
Q Consensus 420 -~~~lRv~~~~~~T~edid~~~~~l~~~ 446 (476)
.+.+|++++..+|++++++++++|+++
T Consensus 361 ~~~~iRis~~~~~~~~~i~~~~~~l~~~ 388 (390)
T 1elu_A 361 DPDCIRACCHYITDEEEINHLLARLADF 388 (390)
T ss_dssp TTTEEEEECCTTCCHHHHHHHHHHHTTC
T ss_pred CCCeEEEecccCCCHHHHHHHHHHHHhh
Confidence 478999999999999999999998653
No 44
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.95 E-value=1.1e-25 Score=232.02 Aligned_cols=294 Identities=15% Similarity=0.125 Sum_probs=206.4
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhh------CCC-------------cEEEecCCCchH
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREV------FPD-------------GILYASRESHYS 196 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~------~p~-------------~~Vl~s~~~H~S 196 (476)
...++..++++++++++|.+++ .+++|+|+|+|+..++.++.+. .|| +.|+++..+|.|
T Consensus 58 ~~~~~~~~l~~~la~~~g~~~~--~v~~~~g~t~a~~~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s 135 (432)
T 3a9z_A 58 KAKDIINTARASLAKMIGGKPQ--DIIFTSGGTESNNLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDS 135 (432)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGG--GEEEESCHHHHHHHHHHHHHHHHHHHHHHC------------CCCEEEEETTCCHH
T ss_pred HHHHHHHHHHHHHHHHcCCCcC--eEEEeCChHHHHHHHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcchh
Confidence 3457778899999999998643 5999999999999998887520 155 578888999999
Q ss_pred HHHHH----HHcCCeEEEEeCCC-CCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhC-------
Q 011842 197 VFKAA----RMYRMECVKVDCLI-SGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESG------- 264 (476)
Q Consensus 197 ~~~~~----~~~G~~v~~v~~~~-~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g------- 264 (476)
+.... +..|++++.+|+++ ++.+|+++|++++.++ +.+|++++++|++|.+.|+++|.++|++||
T Consensus 136 ~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~i~~~---~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~~ 212 (432)
T 3a9z_A 136 IRLPLEHLVEDQVAEVTFVPVSKVNGQVEVEDILAAVRPT---TCLVTIMLANNETGVIMPISEISRRIKALNQIRAASG 212 (432)
T ss_dssp HHHHHHHHHHTTSCEEEEECCCTTTSSCCHHHHHHTCCTT---EEEEECCSBCTTTCBBCCHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCcEEEEEecCcccCCcCHHHHHHhccCC---ceEEEEECcccCcccccCHHHHHHHHHhcCccccccc
Confidence 86554 34689999999975 7889999999988654 458889999999999999999999999999
Q ss_pred ---CCCCceEEEEecCcccccccccccCCCCCCcc-cccEEEEcCCCCCCCCCCceeEEeehhh-hhhhcCCccccCCC-
Q 011842 265 ---FTQDRFYIHCDGALFGLMMPFVKKAPKVSFKK-PIGSVSVSGHKFVGCPMPCGVQITRMEH-INVLSSNVEYLASR- 338 (476)
Q Consensus 265 ---~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~-~~~l~~~~~yl~~~- 338 (476)
+ |+|+|++|+.+..+ ++... .+|+++.|+|||++ |. +|+++++++. ...+. ..|....
T Consensus 213 ~~~~-----~livDea~~~~~~~-------~~~~~~~~d~~~~s~~K~~g-~~-~G~~~~~~~~~~~~~~--~~~~~~~~ 276 (432)
T 3a9z_A 213 LPRV-----LVHTDAAQALGKRR-------VDVEDLGVDFLTIVGHKFYG-PR-IGALYVRGVGKLTPLY--PMLFGGGQ 276 (432)
T ss_dssp CCCC-----EEEEECTTTTTTSC-------CCHHHHCCSEEEEEGGGTTC-CS-CEEEEETTBTTTBCCC--CSCCSSCG
T ss_pred CCce-----EEEEEchhhhCCcc-------cChhhcCCCEEEEehhHhcC-Cc-ceEEEEccccccCCcC--ceeecCCc
Confidence 9 99999999754332 23222 37999999999986 55 9999998764 22221 1121111
Q ss_pred -CCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhc-CCeEee-cC-----C-eeEEEEecCC---
Q 011842 339 -DATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDA-GISAML-NE-----L-SSTVVFERPQ--- 406 (476)
Q Consensus 339 -~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~-g~~~~~-~~-----~-~~iv~f~~~~--- 406 (476)
.....++.+......+.++++.+ .+++++..++..++++++.+.|++. |+.... .+ . ..++.|..++
T Consensus 277 ~~~~~~~~~~~~~~~a~~aal~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (432)
T 3a9z_A 277 ERNFRPGTENTPMIAGLGKAADLV-SENCETYEAHMRDIRDYLEERLEAEFGKRIHLNSRFPGVERLPNTCNFSIQGSQL 355 (432)
T ss_dssp GGGTSCSCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHGGGEEESSCCTTCCBCTTEEEEEECSTTC
T ss_pred cccccCCCcCHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHhccCCcEEEeCCCCcccCCCCEEEEEeCCCCC
Confidence 00112333322223344455544 3467888999999999999999884 543321 22 1 2355555432
Q ss_pred -cHHHhhc---eeec----c---------------------cCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 011842 407 -DEEFVRR---WQLA----C---------------------QGNIAHVVVMPNVTIDKLDDFLNELIENRSTWY 451 (476)
Q Consensus 407 -~~~~~~~---~~l~----~---------------------~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~ 451 (476)
...+.+. +.+. + ..+.+|++++..+|++|+++++++|+++.+++.
T Consensus 356 ~~~~~~~~l~~i~~~~G~~~~~~~~~~~~~~l~~~g~~~~~~~~~iRis~~~~~t~eei~~~~~~l~~~~~~~~ 429 (432)
T 3a9z_A 356 RGYMVLAQCQTLLASVGASCHSDHEDRPSPVLLSCGIPVDVARNAVRLSVGRSTTRAEVDLIVQDLKQAVNQLE 429 (432)
T ss_dssp CHHHHHHHCSSEECBSSCGGGGGGTTSCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHhcCeEEeccccccCCCCCCccHHHHhcCCCccccCceEEEEcCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 2233221 1110 0 126899999999999999999999999887653
No 45
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.95 E-value=2.6e-26 Score=233.91 Aligned_cols=294 Identities=14% Similarity=0.070 Sum_probs=192.1
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhh--CCCc-EEEecCCCchHHHHHHHH---cCCeEE
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREV--FPDG-ILYASRESHYSVFKAARM---YRMECV 209 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~--~p~~-~Vl~s~~~H~S~~~~~~~---~G~~v~ 209 (476)
...++.+++++++++++|.+++ .+++|+|||+|+..++.+++.. .|++ .|+++..+|+++...+.. .|++++
T Consensus 60 ~~~~~~~~l~~~la~~~~~~~~--~v~~~~g~t~al~~~~~~l~~~~~~~gd~~Vl~~~~~~~~~~~~~~~~~~~g~~~~ 137 (400)
T 3vax_A 60 RAKRGVERAREYLASTVSAEPD--ELIFTSGATESNNIALLGLAPYGERTGRRHIITSAIEHKAVLEPLEHLAGRGFEVD 137 (400)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGG--GEEEESCHHHHHHHHHHTTHHHHHHHTCCEEEEETTSCHHHHHHHHHHHTTTCEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCCC--cEEEeCCHHHHHHHHHHHHHHhhccCCCCEEEECccccHhHHHHHHHHHhcCCeEE
Confidence 3457788899999999999743 5999999999999999887611 2889 999999999998776665 499999
Q ss_pred EEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccC
Q 011842 210 KVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKA 289 (476)
Q Consensus 210 ~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~ 289 (476)
.+|.++++.+|+++|+++|.+++ .+|++++++|++|.+.|+++|.++|++||+ ++++|++|+.+..+.
T Consensus 138 ~v~~~~~~~~d~~~l~~~i~~~~---~~v~~~~~~nptG~~~~l~~i~~la~~~~~-----~li~D~a~~~~~~~~---- 205 (400)
T 3vax_A 138 FLTPGPSGRISVEGVMERLRPDT---LLVSLMHVNNETGVIQPVAELAQQLRATPT-----YLHVDAAQGYGKVPG---- 205 (400)
T ss_dssp EECCCTTCCCCHHHHHTTCCTTE---EEEECCSBCTTTCBBCCHHHHHHHHTTSSC-----EEEEECTTTTTTSGG----
T ss_pred EEccCCCCCcCHHHHHHhcCCCc---eEEEEECCCCCceeeCcHHHHHHHHHhcCC-----EEEEEhhhhcCCCCc----
Confidence 99999899999999999987544 488888999999999999999999999999 999999998654431
Q ss_pred CCCCCcccccEEEEcCCCCCCCCCCceeEE-eehhhhhhh-cCCccccCCCC--Ccc-cCCCCChhHHHHHHHHHHhChh
Q 011842 290 PKVSFKKPIGSVSVSGHKFVGCPMPCGVQI-TRMEHINVL-SSNVEYLASRD--ATI-MGSRNGHAPIFLWYTLNRKGYK 364 (476)
Q Consensus 290 ~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~-~~~~~~~~l-~~~~~yl~~~~--~~~-~~sr~~~~~l~~~~~l~~~g~~ 364 (476)
+....+|+++.++||+++ |.++|+++ ++++.+... .....++.... ..+ .++.+......+.++++.+ .+
T Consensus 206 ---~~~~~~d~~~~s~~K~~g-~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~-~~ 280 (400)
T 3vax_A 206 ---DLTTPIDMISISGHKIGA-PKGVGALVTRRREEMDDERVPLEPIMFGGGQERKLRPGTLPVPLIMGLAEAAKIF-EA 280 (400)
T ss_dssp ---GGGSCCSEEEEETGGGTS-CSSCEEEEECBCSSSTTCBCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHH-HH
T ss_pred ---ChhhcCcEEEEeHHHhCC-CCceEEEEEecchhccccccccCceecCCCceeeeecCCCCHHHHHHHHHHHHHH-Hh
Confidence 111117899999999654 78899999 887321100 00011111100 011 2222222222333444433 34
Q ss_pred cHHHHHHHHHHHHHHHHHHHHhcCCeEeecCC---eeEEEEecCC--cHHHhh----ceeeccc----------------
Q 011842 365 GFQKEVQKCLRNAHYLKDRLLDAGISAMLNEL---SSTVVFERPQ--DEEFVR----RWQLACQ---------------- 419 (476)
Q Consensus 365 g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~---~~iv~f~~~~--~~~~~~----~~~l~~~---------------- 419 (476)
++++..++..++++++.+.|+..++....++. .+++.|..++ ..++.+ ++.+...
T Consensus 281 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~gi~v~~g~~~~~~~~~~~~~~~~ 360 (400)
T 3vax_A 281 EHAQWQVAAQDLRSRLLAGLASTSFQVNGDQDHVVPHILNLSFEDVDAEAFLVTLKDLVAVATGSASTSASFTPSHVLRA 360 (400)
T ss_dssp SHHHHHHHHHHHHHHHHHHHTTTTCEECSCTTSBCTTEEEEECTTCCHHHHHHHHHHHHHHTTTTEEEEEEECCHHHHHT
T ss_pred hHHHHHHHHHHHHHHHHHhhCCCCEEEeCCcccCCCCEEEEEeCCCCHHHHHHHHhcCcEEEecccccCCCCCccHHHHH
Confidence 67889999999999999999833444333332 2577776653 222222 2222110
Q ss_pred --------CCEEEEEE-cCCCCHHHHHHHHHHHHHHHH
Q 011842 420 --------GNIAHVVV-MPNVTIDKLDDFLNELIENRS 448 (476)
Q Consensus 420 --------~~~lRv~~-~~~~T~edid~~~~~l~~~~~ 448 (476)
.+.+|+++ +..+|+++|++++++|+++.+
T Consensus 361 ~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~ 398 (400)
T 3vax_A 361 MGLPEEAASKSLRFSWTPGQATDLDVEELARGVAKLKP 398 (400)
T ss_dssp TTCCHHHHTSEEEEEEEEC-------------------
T ss_pred cCCCccccCceEEEEccCCCCCHHHHHHHHHHHHHHhc
Confidence 37899999 999999999999999988764
No 46
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.95 E-value=3.1e-25 Score=227.29 Aligned_cols=287 Identities=12% Similarity=0.069 Sum_probs=208.3
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhh----CCCc-EEEecCCCchHHHHHH----HHc--CCe
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREV----FPDG-ILYASRESHYSVFKAA----RMY--RME 207 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~----~p~~-~Vl~s~~~H~S~~~~~----~~~--G~~ 207 (476)
+...++++++++++|.+++ .+++|+|+|+++..++.+++.. .|++ +|+++...|.++..+. +.. |++
T Consensus 71 ~~~~~l~~~la~~~g~~~~--~v~~~~g~t~al~~al~~~~~~~~~~~~gd~vii~~~~~~~~~~~~~~~~~~~~~~g~~ 148 (416)
T 1qz9_A 71 DLSERLGNRLATLIGARDG--EVVVTDTTSINLFKVLSAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYT 148 (416)
T ss_dssp GHHHHHHHHHHTTTTCCTT--SEEECSCHHHHHHHHHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCE
T ss_pred HHHHHHHHHHHHHcCCCcc--cEEEeCChhHHHHHHHHhhcccccccCCCCcEEEEcCCCCCchHHHHHHHHHHhcCCce
Confidence 5566788889999998643 4889999999998888877532 3776 5778888998866543 334 999
Q ss_pred EEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccc
Q 011842 208 CVKVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVK 287 (476)
Q Consensus 208 v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~ 287 (476)
++.+|. +++|+++|.++ +.+|++++++|++|.+.|+++|.++|++||+ ++|+|++|+.+..+
T Consensus 149 ~~~v~~-------~~~l~~~i~~~---~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~-----~li~D~a~~~g~~~--- 210 (416)
T 1qz9_A 149 LRLVDS-------PEELPQAIDQD---TAVVMLTHVNYKTGYMHDMQALTALSHECGA-----LAIWDLAHSAGAVP--- 210 (416)
T ss_dssp EEEESS-------GGGHHHHCSTT---EEEEEEESBCTTTCBBCCHHHHHHHHHHHTC-----EEEEECTTTTTTSC---
T ss_pred EEEeCc-------HHHHHHHhCCC---ceEEEEeccccCcccccCHHHHHHHHHHcCC-----EEEEEccccccCcC---
Confidence 998886 67888888643 4588899999999999999999999999999 99999999854332
Q ss_pred cCCCCCCcc-cccEEEEcCCCCCCCCCCc-eeEEeehhhhhhhcCC-ccccCCC-------C-------Ccc-cCCCCCh
Q 011842 288 KAPKVSFKK-PIGSVSVSGHKFVGCPMPC-GVQITRMEHINVLSSN-VEYLASR-------D-------ATI-MGSRNGH 349 (476)
Q Consensus 288 ~~~~~~~~~-~~Dsi~~s~hK~l~~p~~~-G~l~~~~~~~~~l~~~-~~yl~~~-------~-------~~~-~~sr~~~ 349 (476)
+++.. .+|+++.|+||++++|+++ |++++++++++.+... ..|.... . ..+ .++.+..
T Consensus 211 ----~~~~~~~~d~~~~s~~K~l~~g~~~~g~l~~~~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (416)
T 1qz9_A 211 ----VDLHQAGADYAIGCTYKYLNGGPGSQAFVWVSPQLCDLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPIT 286 (416)
T ss_dssp ----CCHHHHTCSEEEECSSSTTCCCTTCCCEEEECTTTTTTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHH
T ss_pred ----CChhhcCCCEEEecCcccCCCCCCCeEEEEECHHHHhccCCCccccCccccccCCCCccCCCcchHHhcCCCCCHH
Confidence 22222 3799999999999888888 9999998876554321 1111000 0 011 2333333
Q ss_pred hHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhc----CCeEeecC----CeeEEEEecCCcHHHhh-----ceee
Q 011842 350 APIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDA----GISAMLNE----LSSTVVFERPQDEEFVR-----RWQL 416 (476)
Q Consensus 350 ~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----g~~~~~~~----~~~iv~f~~~~~~~~~~-----~~~l 416 (476)
...++.++++.+..+++++..++..++++++.+.|++. |+....++ ..+++.|..++..++.+ ++.+
T Consensus 287 ~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~ 366 (416)
T 1qz9_A 287 SLAMVECGLDVFAQTDMASLRRKSLALTDLFIELVEQRCAAHELTLVTPREHAKRGSHVSFEHPEGYAVIQALIDRGVIG 366 (416)
T ss_dssp HHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHTTSCCEECSCSSGGGBCSEEEEECTTHHHHHHHHHTTTEEC
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhccCCCeEEeCCCCHHHcCCEEEEecCCHHHHHHHHHhCCcEe
Confidence 34455667777666788999999999999999999986 66544332 25677777765443332 2222
Q ss_pred c-ccCCEEEEEEc-CCCCHHHHHHHHHHHHHHHHH
Q 011842 417 A-CQGNIAHVVVM-PNVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 417 ~-~~~~~lRv~~~-~~~T~edid~~~~~l~~~~~~ 449 (476)
. ...+.+|+++. ..+|++||++++++|+++.++
T Consensus 367 ~~~~~~~lRis~~~~~~t~~~i~~~~~~l~~~~~~ 401 (416)
T 1qz9_A 367 DYREPRIMRFGFTPLYTTFTEVWDAVQILGEILDR 401 (416)
T ss_dssp EEETTTEEEEECCTTTCCHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCeEEEeCcccCCCHHHHHHHHHHHHHHHhc
Confidence 2 24578999997 589999999999999988765
No 47
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=99.95 E-value=2.4e-25 Score=227.52 Aligned_cols=331 Identities=12% Similarity=0.039 Sum_probs=223.7
Q ss_pred cCCCCcCCcchHHHHHHHHHhhCCCCCCcccCccchhhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHH
Q 011842 100 LGYPYNLDFDYGALAQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGR 179 (476)
Q Consensus 100 ~g~p~~~~~~~~~l~~~l~~~~n~~g~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~ 179 (476)
.|.|....++...+.+.+...+...+.... ++...+..++++++.+++.+.+|++.+...+++|+|||+|+..++.+++
T Consensus 41 ~g~~~~~~~~~~~v~~a~~~~~~~~~~~~~-y~~~~~~~~l~~~la~~~~~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~ 119 (407)
T 2zc0_A 41 AGDPDPELIPRAVLGEIAKEVLEKEPKSVM-YTPANGIPELREELAAFLKKYDHLEVSPENIVITIGGTGALDLLGRVLI 119 (407)
T ss_dssp SCCCCTTTSCHHHHHHHHHHHHHHCGGGGS-CCCTTCCHHHHHHHHHHHHHHSCCCCCGGGEEEESHHHHHHHHHHHHHC
T ss_pred CCCCCchhCCHHHHHHHHHHHHhhcccccc-CCCCCCCHHHHHHHHHHHHHhcCCCCCcceEEEecCHHHHHHHHHHHhc
Confidence 366665555545555544433332211111 1112245799999999998888965444569999999999999999886
Q ss_pred hhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccCHHHHHHHHH----cCCCCcEEE-EEeeCCCccccccCHH
Q 011842 180 EVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCADFKAKLL----QNKDKPAII-NVNIGTTVKGAVDDLD 254 (476)
Q Consensus 180 ~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~~~Le~~l~----~~~~~p~~v-v~t~gtt~tG~id~l~ 254 (476)
. +++.|+++.++|.++...++..|++++.+|+++++ +|+++|++++. +.. ++.+| ++++++|++|.+.|++
T Consensus 120 ~--~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~-~d~~~l~~~l~~~~~~~~-~~~~v~~~~~~~nptG~~~~~~ 195 (407)
T 2zc0_A 120 D--PGDVVITENPSYINTLLAFEQLGAKIEGVPVDNDG-MRVDLLEEKIKELKAKGQ-KVKLIYTIPTGQNPMGVTMSME 195 (407)
T ss_dssp C--TTCEEEEEESCCHHHHHHHHTTTCEEEEEEEETTE-ECHHHHHHHHHHHHHTTC-CEEEEEECCSSCTTTCCCCCHH
T ss_pred C--CCCEEEEeCCChHHHHHHHHHcCCEEEEcccCCCC-CCHHHHHHHHHhhhcccC-CceEEEECCCCCCCCCcCCCHH
Confidence 5 89999999999999999999999999999987665 99999999998 421 23354 5668899999998876
Q ss_pred ---HHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCcc-cccEEEEcCCCCCCCCCCceeEEeehhhhhhhcC
Q 011842 255 ---LVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSS 330 (476)
Q Consensus 255 ---~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~ 330 (476)
+|+++|++||+ ++|+|++|+++.+......+...+.. ..+++..+++|+++.++++|++++++++++.+..
T Consensus 196 ~l~~i~~~~~~~~~-----~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~~~~~~~~~~ 270 (407)
T 2zc0_A 196 RRKALLEIASKYDL-----LIIEDTAYNFMRYEGGDIVPLKALDNEGRVIVAGTLSKVLGTGFRIGWIIAEGEILKKVLM 270 (407)
T ss_dssp HHHHHHHHHHHHTC-----EEEEECTTTTSBSSCSSCCCGGGGCSSCCEEEEEESTTTTCTTSCCEEEECCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCC-----EEEEECCCcccccCCCCCCChhhcCCCCCEEEEcccccccCCCcceEEEecCHHHHHHHHH
Confidence 99999999999 99999999876543211111111111 2346778889999976789999999877665532
Q ss_pred CccccCCCCCcccCCCCChhHHHHHHHHHHhC----h-hcHHHHHHHHHHHHHHHHHHHHhc--CCeEeecCCeeEEEEe
Q 011842 331 NVEYLASRDATIMGSRNGHAPIFLWYTLNRKG----Y-KGFQKEVQKCLRNAHYLKDRLLDA--GISAMLNELSSTVVFE 403 (476)
Q Consensus 331 ~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g----~-~g~~~~~~~~~~~a~~l~~~L~~~--g~~~~~~~~~~iv~f~ 403 (476)
..... ++ +.+ .+.++++...+. . ..+++..++..++++++.+.|++. ++....+...+++.+.
T Consensus 271 ~~~~~-----~~--~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~ 340 (407)
T 2zc0_A 271 QKQPI-----DF--CAP---AISQYIALEYLKRGYFEKYHLEGALLGYKEKRDIMLKALENHLPNAEFTKPIAGMFVMFF 340 (407)
T ss_dssp HHTTT-----TS--SSC---HHHHHHHHHHHHTTHHHHHTTTTHHHHHHHHHHHHHHHHHHHCTTSCBCCCSBSSEEEEE
T ss_pred HHHhh-----cC--CCC---HHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEecCCCcEEEEEE
Confidence 11110 11 111 233333333331 1 345567777888999999999874 4433333445566677
Q ss_pred cCC---cHHHh-----h-ceeecc---------cCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 011842 404 RPQ---DEEFV-----R-RWQLAC---------QGNIAHVVVMPNVTIDKLDDFLNELIENRSTWY 451 (476)
Q Consensus 404 ~~~---~~~~~-----~-~~~l~~---------~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~ 451 (476)
.+. ..++. + ++.+.. ..+.+|+++... |+++|++++++|+++.+++.
T Consensus 341 ~~~~~~~~~l~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~~-~~~~i~~~~~~l~~~l~~~~ 405 (407)
T 2zc0_A 341 LPEGADGISFANELMEREGVVVVPGKPFYTDESGKNAIRLNFSRP-SKEEIPIGIKKLAKLYKEKF 405 (407)
T ss_dssp CSTTCCHHHHHHHHHHHTCEECBCSGGGCSSSCCTTEEEEECSSS-CTTHHHHHHHHHHHHHHHHC
T ss_pred cCCCCCHHHHHHHHHHhCCeEEECchhccCCCCCCCeEEEEeCCC-CHHHHHHHHHHHHHHHHHHh
Confidence 653 22222 2 343321 246899988766 89999999999999887653
No 48
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.94 E-value=9.8e-26 Score=228.06 Aligned_cols=295 Identities=12% Similarity=0.055 Sum_probs=209.4
Q ss_pred HHHHHHHHHHHHHcCCCC--CcccEEEcCCchhHHHHHHHHHHh-hCCCcEEEecCCCc--hHHHHHHHHcCCeEEEEeC
Q 011842 139 QFEVGVLDWFARLWELEN--NEYWGYITNCGTEGNLHGILVGRE-VFPDGILYASRESH--YSVFKAARMYRMECVKVDC 213 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~--~~~~g~~t~ggt~An~~al~aa~~-~~p~~~Vl~s~~~H--~S~~~~~~~~G~~v~~v~~ 213 (476)
....+++++++++++... +...+++|+|||+|+..++.++.. ..+++.|++.+..+ .++...++..|++++.+++
T Consensus 38 ~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~t~al~~~~~~~~~~~~~gd~vlv~~~~~~~~~~~~~~~~~g~~~~~v~~ 117 (385)
T 2bkw_A 38 SIFQRVLKNTRAVFKSAAASKSQPFVLAGSGTLGWDIFASNFILSKAPNKNVLVVSTGTFSDRFADCLRSYGAQVDVVRP 117 (385)
T ss_dssp HHHHHHHHHHHHHTTCCGGGTCEEEEEESCTTHHHHHHHHHHSCTTCSCCEEEEECSSHHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHHHHhCCCCCCCCceEEEcCchHHHHHHHHHHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCceEEEec
Confidence 445567777788777641 124589999999999999988751 12888887765443 3445677888999999999
Q ss_pred -CCCCccCHHHHHHHHHc-CCCCcEEEEEeeCCCccccccCHHHHHHHHHHh--CCCCCceEEEEecCcccccccccccC
Q 011842 214 -LISGEIDCADFKAKLLQ-NKDKPAIINVNIGTTVKGAVDDLDLVIQTLEES--GFTQDRFYIHCDGALFGLMMPFVKKA 289 (476)
Q Consensus 214 -~~~g~~D~~~Le~~l~~-~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~--g~~~~~~~lhvD~a~~g~~~~~~~~~ 289 (476)
+.++.+|+++|+++|++ +++ +|++++++|++|.+.|+++|.++|++| |+ ++|+|++|+.+..+
T Consensus 118 ~~~~~~~d~~~l~~~l~~~~~~---~v~~~~~~nptG~~~~l~~i~~~~~~~~~~~-----~li~D~a~~~~~~~----- 184 (385)
T 2bkw_A 118 LKIGESVPLELITEKLSQNSYG---AVTVTHVDTSTAVLSDLKAISQAIKQTSPET-----FFVVDAVCSIGCEE----- 184 (385)
T ss_dssp SSTTSCCCHHHHHHHHHHSCCS---EEEEESEETTTTEECCHHHHHHHHHHHCTTS-----EEEEECTTTTTTSC-----
T ss_pred CCCCCCCCHHHHHHHHhcCCCC---EEEEEccCCCcCeEcCHHHHHHHHHhhCCCC-----EEEEECccccCCcc-----
Confidence 88889999999999987 444 788889999999999999999999999 99 99999999854433
Q ss_pred CCCCCcc-cccEEEEcCCCCCCCCCCceeEEeehhhhh-hhcC-----CccccCC-------------CCCcccCCCCCh
Q 011842 290 PKVSFKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHIN-VLSS-----NVEYLAS-------------RDATIMGSRNGH 349 (476)
Q Consensus 290 ~~~~~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~-~l~~-----~~~yl~~-------------~~~~~~~sr~~~ 349 (476)
++... .+|+++.++|||+++|.|+|+++++++.++ .+.. ...|... ......++.+..
T Consensus 185 --~~~~~~~~d~~~~s~~K~~~~~~G~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (385)
T 2bkw_A 185 --FEFDEWGVDFALTASQKAIGAPAGLSISLCSSRFMDYALNDSKNGHVHGYFSSLRRWTPIMENYEAGKGAYFATPPVQ 262 (385)
T ss_dssp --CCTTTTTCSEEEEESSSTTCCCSCEEEEEECHHHHHHHTCHHHHCCCSCSTTCHHHHHHHHHHHHTTCCCCSSCCCHH
T ss_pred --ccccccCceEEEecCccccccCCcceEEEEcHHHHHHHHhhccCCCCCceeecHHHHhhHHHhhhccCCCCCCCCCHH
Confidence 22222 379999999999998899999999988765 4420 1111100 000011233323
Q ss_pred hHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHH-HhcCCeEeecC-----CeeEEEEecCCcHHHhh-----ceeecc
Q 011842 350 APIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRL-LDAGISAMLNE-----LSSTVVFERPQDEEFVR-----RWQLAC 418 (476)
Q Consensus 350 ~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L-~~~g~~~~~~~-----~~~iv~f~~~~~~~~~~-----~~~l~~ 418 (476)
..+.+.++++.+...+++++.++..++++++.+.| ++.|+....++ ..+++.|..++..++.+ ++.+..
T Consensus 263 ~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~ 342 (385)
T 2bkw_A 263 LINSLDVALKEILEEGLHKRWDLHREMSDWFKDSLVNGLQLTSVSRYPSNMSAHGLTAVYVADPPDVIAFLKSHGVVIAG 342 (385)
T ss_dssp HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTTTCCEESSCSSSTTBCSSCEEEECSCHHHHHHHHHHTTEECBC
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHhcCceecccCcccccCCceEEEecCCHHHHHHHHHHCCeEEeC
Confidence 33445556666544568888999999999999999 88876544322 35677777765433332 233321
Q ss_pred ------cCCEEEEE-EcC---CCCHHHHHHHHHHHHHHHH
Q 011842 419 ------QGNIAHVV-VMP---NVTIDKLDDFLNELIENRS 448 (476)
Q Consensus 419 ------~~~~lRv~-~~~---~~T~edid~~~~~l~~~~~ 448 (476)
..+.+|++ +.+ .+|++|+++++++|+++.+
T Consensus 343 g~~~~~~~~~iRis~~~~~~~~~~~e~i~~~~~~l~~~~~ 382 (385)
T 2bkw_A 343 GIHKDIGPKYIRIGHMGVTACNKNLPYMKNCFDLIKLALQ 382 (385)
T ss_dssp CCCTTTGGGEEEECCCGGGTSSTTCTHHHHHHHHHHHHTT
T ss_pred CCCcccCCCEEEEEccccccccCCHHHHHHHHHHHHHHHH
Confidence 24689998 553 4799999999999988754
No 49
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.94 E-value=8.7e-27 Score=236.98 Aligned_cols=289 Identities=13% Similarity=0.071 Sum_probs=209.0
Q ss_pred hhhHHHHHHHHHHHHHHcCCCCCcccEEE-cCCchhHHHHHHHHHHhhCCCcEEEecCCCchH--HHHHHHHcCCeEEEE
Q 011842 135 VHSRQFEVGVLDWFARLWELENNEYWGYI-TNCGTEGNLHGILVGREVFPDGILYASRESHYS--VFKAARMYRMECVKV 211 (476)
Q Consensus 135 ~~~~~le~~~~~~la~l~g~~~~~~~g~~-t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S--~~~~~~~~G~~v~~v 211 (476)
....++.+++++.+++++|.++ ++.++| |+|||+|+.+++..... +++.+++...+|++ +...++..| ++..+
T Consensus 68 ~~~~~~~~~ar~~la~ll~~~~-~~evif~t~~~T~a~n~ai~~l~~--~gd~v~~~~~~~~~~~~~~~a~~~G-~v~~v 143 (386)
T 3qm2_A 68 KEFIQVAEEAEQDFRDLLNIPS-NYKVLFCHGGGRGQFAGVPLNLLG--DKTTADYVDAGYWAASAIKEAKKYC-APQII 143 (386)
T ss_dssp -----CCHHHHHHHHHHHTCCT-TEEEEEEESCTTHHHHHHHHHHCT--TCCEEEEEESSHHHHHHHHHHTTTS-EEEEE
T ss_pred HHHHHHHHHHHHHHHHHhCCCC-CceEEEEcCCchHHHHHHHHhccC--CCCeEEEEeCCHHHHHHHHHHHHhC-CeEEE
Confidence 3455777789999999999963 345888 68999999999887754 77776655555655 344556678 89999
Q ss_pred eCC--CCCc-cCHHHHHHHHHcCCCCcEEEEEeeCCCccccc-cCHHHHHHHHHHhCCCCCceEEEEecCcccccccccc
Q 011842 212 DCL--ISGE-IDCADFKAKLLQNKDKPAIINVNIGTTVKGAV-DDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVK 287 (476)
Q Consensus 212 ~~~--~~g~-~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~i-d~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~ 287 (476)
+.+ ++|. +|+++++++|.++++ +|.+++.+|.+|.+ .|+++|. +|+ ++|||++++.+..|
T Consensus 144 ~~~~~~~G~~~~~~~~~~~l~~~t~---lV~~~h~et~tG~~i~pi~~i~-----~g~-----~~~vDa~qs~g~~p--- 207 (386)
T 3qm2_A 144 DAKITVDGKRAVKPMREWQLSDNAA---YLHYCPNETIDGIAIDETPDFG-----PEV-----VVTADFSSTILSAP--- 207 (386)
T ss_dssp ECEEEETTEEEECCGGGCCCCTTCS---CEEECSEETTTTEECCCCCCCC-----TTC-----CEEEECTTTTTSSC---
T ss_pred ecCcccCCCCCCchHHHhhcCCCCc---EEEEECCcCCcCEecCchhhhc-----CCC-----EEEEEcccccCCCC---
Confidence 988 5775 888888887776665 78888999999996 9999886 799 99999999988777
Q ss_pred cCCCCCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcC-CccccCC----CCCcccCCCCChhHHHHHHHHHHhC
Q 011842 288 KAPKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSS-NVEYLAS----RDATIMGSRNGHAPIFLWYTLNRKG 362 (476)
Q Consensus 288 ~~~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~-~~~yl~~----~~~~~~~sr~~~~~l~~~~~l~~~g 362 (476)
+++.+ .|.+++++|||++ |.|+|++++++++++.+.. .+.++.. ......+|.+....+.+..+++.+.
T Consensus 208 ----idv~~-~~~~~~s~hK~lG-P~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~gTp~v~~i~~l~~Al~~~~ 281 (386)
T 3qm2_A 208 ----LDVSR-YGVIYAGAQKNIG-PAGLTLVIVREDLLGKAHESCPSILDYTVLNDNDSMFNTPPTFAWYLSGLVFKWLK 281 (386)
T ss_dssp ----CCGGG-CSEEEEETTTTTC-CTTEEEEEEEGGGCSCCCTTSCGGGCHHHHHHC-------CCSHHHHHHHHHHHHH
T ss_pred ----CCccc-cCEEEEecccccC-CCccEEEEECHHHHhhhcccCCcHHHHHHHhhcCCCCCCCcHHHHHHHHHHHHHHH
Confidence 55544 3567899999996 9999999999987654432 2223210 1111235666666777888888887
Q ss_pred hh-cHHHHHHHHHHHHHHHHHHHHhcCCeEee-cC--Ce-eEEEEecCC---cHHHhh-----ceeeccc---CCEEEEE
Q 011842 363 YK-GFQKEVQKCLRNAHYLKDRLLDAGISAML-NE--LS-STVVFERPQ---DEEFVR-----RWQLACQ---GNIAHVV 426 (476)
Q Consensus 363 ~~-g~~~~~~~~~~~a~~l~~~L~~~g~~~~~-~~--~~-~iv~f~~~~---~~~~~~-----~~~l~~~---~~~lRv~ 426 (476)
.. |++++.++..+++++|++.|++.++.... .+ .+ .+++|..++ +..+.. ++.+... .+.+|++
T Consensus 282 ~~gG~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~iv~f~~~~~~~~~~~~~~L~~~gI~~~~g~~~~~~iRiS 361 (386)
T 3qm2_A 282 AQGGVAAMHKINQQKAELLYGVIDNSDFYRNDVAQANRSRMNVPFQLADNTLDKVFLEESFAAGLHALKGHRVVGGMRAS 361 (386)
T ss_dssp HHTHHHHHHHHHHHHHHHHHHHHHTCSSEECCBCGGGBCSSEEEEEESSGGGHHHHHHHHHHTTEECCBCCTTTCSEEEE
T ss_pred HhcCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHcCceEEEEECCCccccHHHHHHHHHCCCEEeCCCCCcCeEEEE
Confidence 77 89999999999999999999998864332 22 23 578888774 223322 2222111 1459999
Q ss_pred EcCCCCHHHHHHHHHHHHHHHHH
Q 011842 427 VMPNVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 427 ~~~~~T~edid~~~~~l~~~~~~ 449 (476)
++.++|++|||+|+++|+++.++
T Consensus 362 ~~~~~t~edId~l~~~l~~~~~~ 384 (386)
T 3qm2_A 362 IYNAMPIEGVKALTDFMIDFERR 384 (386)
T ss_dssp CCTTSCHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHHHHHHh
Confidence 99999999999999999998764
No 50
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=99.94 E-value=4.5e-25 Score=223.85 Aligned_cols=293 Identities=11% Similarity=0.070 Sum_probs=210.6
Q ss_pred HHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCC-CC
Q 011842 138 RQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCL-IS 216 (476)
Q Consensus 138 ~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~-~~ 216 (476)
.++++++++++++.+|.+.+...+++|+|+|+|+..++.++.. +++.|+++.++|.++...++..|++++.+|++ .+
T Consensus 65 ~~l~~~la~~l~~~~g~~~~~~~i~~~~g~~~a~~~~~~~l~~--~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 142 (391)
T 3dzz_A 65 AEYYKAVADWEEIEHRARPKEDWCVFASGVVPAISAMVRQFTS--PGDQILVQEPVYNMFYSVIEGNGRRVISSDLIYEN 142 (391)
T ss_dssp HHHHHHHHHHHHHHHSCCCCGGGEEEESCHHHHHHHHHHHHSC--TTCEEEECSSCCHHHHHHHHHTTCEEEECCCEEET
T ss_pred HHHHHHHHHHHHHHhCCCCCHHHEEECCCHHHHHHHHHHHhCC--CCCeEEECCCCcHHHHHHHHHcCCEEEEeeeeecC
Confidence 5899999999999999654455799999999999999988865 89999999999999999999999999999985 23
Q ss_pred --CccCHHHHHHHHHcCCCCcEEEEEeeCCCccccc---cCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCC
Q 011842 217 --GEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAV---DDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPK 291 (476)
Q Consensus 217 --g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~i---d~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~ 291 (476)
+.+|+++|++++.+. ++.+|++++++|++|.+ +++++|+++|++||+ ++|+|++|+++........+.
T Consensus 143 ~~~~~d~~~l~~~l~~~--~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~-----~li~De~~~~~~~~g~~~~~~ 215 (391)
T 3dzz_A 143 SKYSVNWADLEEKLATP--SVRMMVFCNPHNPIGYAWSEEEVKRIAELCAKHQV-----LLISDEIHGDLVLTDEDITPA 215 (391)
T ss_dssp TEEECCHHHHHHHHTST--TEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTC-----EEEEECTTTTCBCSSCCCCCG
T ss_pred CceeecHHHHHHHHhcc--CceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCC-----EEEEecccccccCCCCCceeh
Confidence 349999999999732 23477888999999999 889999999999999 999999998765532222211
Q ss_pred CCCcc-ccc--EEEEcCCCCCC-CCCCceeEEee-hhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcH
Q 011842 292 VSFKK-PIG--SVSVSGHKFVG-CPMPCGVQITR-MEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGF 366 (476)
Q Consensus 292 ~~~~~-~~D--si~~s~hK~l~-~p~~~G~l~~~-~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~ 366 (476)
..... ..| +++.++||+++ .++++|+++++ +++.+.+........ ..+.+......+..++.. +.+.+
T Consensus 216 ~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~a~~~~l~~-~~~~~ 288 (391)
T 3dzz_A 216 FTVDWDAKNWVVSLISPSKTFNLAALHAACAIIPNPDLRARAEESFFLAG------IGEPNLLAIPAAIAAYEE-GHDWL 288 (391)
T ss_dssp GGSCTTTGGGEEEEECSHHHHTCTTTCCEEEECCSHHHHHHHHHHHHHHT------CSSCCTTHHHHHHHHHHH-CHHHH
T ss_pred hhcCccccCcEEEEEeChhhccccchhheEEEECCHHHHHHHHHHHHhhc------cCCCCHHHHHHHHHHHhc-cHHHH
Confidence 22221 145 88999999986 77899999998 556554432111100 111222223333344443 34557
Q ss_pred HHHHHHHHHHHHHHHHHHHh-c-CCeEeecCCe-eEEEEecC----CcHHHh------hceeecc-------cCCEEEEE
Q 011842 367 QKEVQKCLRNAHYLKDRLLD-A-GISAMLNELS-STVVFERP----QDEEFV------RRWQLAC-------QGNIAHVV 426 (476)
Q Consensus 367 ~~~~~~~~~~a~~l~~~L~~-~-g~~~~~~~~~-~iv~f~~~----~~~~~~------~~~~l~~-------~~~~lRv~ 426 (476)
++..++..++++++.+.|++ . ++. +..+.. .++++..+ ...++. ++..+.. ..+.+|++
T Consensus 289 ~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis 367 (391)
T 3dzz_A 289 RELKQVLRDNFAYAREFLAKEVPEVK-VLDSNASYLAWVDISALGMNAEDFCKYLREKTGLIISAGNGYRGNGHEFVRIN 367 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCTTSE-ECCCCBSSEEEEECGGGCSCHHHHHHHHHHHHCEECEESGGGCTTGGGEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCcE-EeccCceEEEEEehhhcCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEE
Confidence 88888999999999999998 4 554 444443 34445443 222222 2333321 13789998
Q ss_pred EcCCCCHHHHHHHHHHHHHHHHH
Q 011842 427 VMPNVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 427 ~~~~~T~edid~~~~~l~~~~~~ 449 (476)
++ +++++|+.+++.|.++.++
T Consensus 368 ~~--~~~~~i~~~l~~l~~~l~~ 388 (391)
T 3dzz_A 368 LA--CPKELVIDGMQRLKQGVLN 388 (391)
T ss_dssp CC--SCHHHHHHHHHHHHHHHHT
T ss_pred ec--CCHHHHHHHHHHHHHHHHH
Confidence 87 7999999999999988764
No 51
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=99.94 E-value=1.8e-25 Score=228.10 Aligned_cols=293 Identities=9% Similarity=-0.047 Sum_probs=215.5
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCc-ccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeC-
Q 011842 136 HSRQFEVGVLDWFARLWELENNE-YWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDC- 213 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~-~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~- 213 (476)
+..++++++.+++++++|.+.++ ..+++|+|||+|+..++.++.. +++.|+++.++|.++..+++..|++++.+|+
T Consensus 79 g~~~l~~~l~~~l~~~~g~~~~~~~~i~~~~g~~~a~~~~~~~l~~--~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~ 156 (407)
T 3nra_A 79 GDLGIRDLLAPRLAAFTGAPVDARDGLIITPGTQGALFLAVAATVA--RGDKVAIVQPDYFANRKLVEFFEGEMVPVQLD 156 (407)
T ss_dssp CCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHTTCC--TTCEEEEEESCCTHHHHHHHHTTCEEEEEEBC
T ss_pred CCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHHHHhCC--CCCEEEEcCCcccchHHHHHHcCCEEEEeecc
Confidence 34689999999999999986422 3599999999999999887754 8999999999999999999999999999998
Q ss_pred -----CCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCcccccccc
Q 011842 214 -----LISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPF 285 (476)
Q Consensus 214 -----~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~ 285 (476)
+.++.+|+++|++++.++++ +|++++++|++|.+.| +++|+++|++||+ ++++|++|+++.+..
T Consensus 157 ~~~~~~~~~~~d~~~l~~~l~~~~~---~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~-----~li~Dea~~~~~~~g 228 (407)
T 3nra_A 157 YVSADETRAGLDLTGLEEAFKAGAR---VFLFSNPNNPAGVVYSAEEIGQIAALAARYGA-----TVIADQLYSRLRYAG 228 (407)
T ss_dssp CCSSCCSSCCBCHHHHHHHHHTTCC---EEEEESSCTTTCCCCCHHHHHHHHHHHHHHTC-----EEEEECTTTTSBCTT
T ss_pred cccccCcCCCcCHHHHHHHHhhCCc---EEEEcCCCCCCCcccCHHHHHHHHHHHHHcCC-----EEEEEccccccccCC
Confidence 36788999999999987554 7778899999999988 9999999999999 999999998765532
Q ss_pred cccCCCCCC---cccccEEEEcCCCCCC-CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHh
Q 011842 286 VKKAPKVSF---KKPIGSVSVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRK 361 (476)
Q Consensus 286 ~~~~~~~~~---~~~~Dsi~~s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~ 361 (476)
....+.... ....++++.+++|+++ .++++|+++.++++++.+.....+. ..+. ..+.++++...+
T Consensus 229 ~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~~~-------~~~~---~~~~~~a~~~~l 298 (407)
T 3nra_A 229 ASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVAFGSRAIIARMEKLQAIV-------SLRA---AGYSQAVLRGWF 298 (407)
T ss_dssp CCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEEEEECHHHHHHHHHHHHHH-------TSSS---CHHHHGGGGGTT
T ss_pred CCCCChhhcCcccCCcEEEEeCcccccCCCeeeEEEEEcCHHHHHHHHHHHhhh-------ccCC---ChHHHHHHHHHH
Confidence 211111111 1235688899999997 6789999999887765553221111 1111 134444444444
Q ss_pred C--hhcHHHHHHHHHHHHHHHHHHHHhc-CCeEeecCCeeEEEEecCC----cHHH----hh--ceeecc-------cCC
Q 011842 362 G--YKGFQKEVQKCLRNAHYLKDRLLDA-GISAMLNELSSTVVFERPQ----DEEF----VR--RWQLAC-------QGN 421 (476)
Q Consensus 362 g--~~g~~~~~~~~~~~a~~l~~~L~~~-g~~~~~~~~~~iv~f~~~~----~~~~----~~--~~~l~~-------~~~ 421 (476)
. ...+++.+++..+++++|.+.|++. ++....+...+.+.+..+. ..++ .+ ++.+.. ..+
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~ 378 (407)
T 3nra_A 299 DEAPGWMEDRIARHQAIRDELLHVLRGCEGVFARTPQAGSYLFPRLPKLAVAPAEFVKILRLQAGVVVTPGTEFSPHTAD 378 (407)
T ss_dssp CCCTTHHHHHHHHHHHHHHHHHHHHHTSTTCBCCCCSBSSEECCBCCCBSSCHHHHHHHHHHHHCEECEEGGGTCTTCTT
T ss_pred hccchHHHHHHHHHHHHHHHHHHHHhcCCCceeccCCeeEEEEEeCCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCC
Confidence 2 2457888889999999999999987 4443333444555555443 1222 11 343321 247
Q ss_pred EEEEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 011842 422 IAHVVVMPNVTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 422 ~lRv~~~~~~T~edid~~~~~l~~~~~~~ 450 (476)
.+|++++ +|+++|+.+++.|+++.+++
T Consensus 379 ~iRis~~--~~~~~i~~~~~~l~~~~~~~ 405 (407)
T 3nra_A 379 SVRLNFS--QDHEAAVAAARRIVTLVERY 405 (407)
T ss_dssp BEEEECC--SCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeC--CCHHHHHHHHHHHHHHHHHh
Confidence 8999887 49999999999999988764
No 52
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=99.94 E-value=7.2e-25 Score=226.12 Aligned_cols=293 Identities=12% Similarity=0.021 Sum_probs=213.2
Q ss_pred hHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCc--EEEecCCCchHHHHHHHHcCCeEEEEeCC
Q 011842 137 SRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDG--ILYASRESHYSVFKAARMYRMECVKVDCL 214 (476)
Q Consensus 137 ~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~--~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~ 214 (476)
..++++++.+++.+.+|.+.+...+++|+|+|+|+..++.++....+++ .|+++.++|.++...++..|++++.+|++
T Consensus 84 ~~~lr~~la~~~~~~~g~~~~~~~i~~t~g~t~al~~~~~~l~~~~~gd~~~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~ 163 (437)
T 3g0t_A 84 LPELKQEASRFAKLFVNIDIPARACVPTVGSMQGCFVSFLVANRTHKNREYGTLFIDPGFNLNKLQCRILGQKFESFDLF 163 (437)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHTTSCTTCSCCEEEEESCCHHHHHHHHHHTCCCEEEEGG
T ss_pred hHHHHHHHHHHHHHhhCCCCCcccEEEeCCHHHHHHHHHHHHhcCCCCCccEEEEeCCCcHhHHHHHHHcCCEEEEEeec
Confidence 4699999999999988877555679999999999999998886112888 99999999999999999999999999996
Q ss_pred C-CCccCHHHHHHHH-HcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCcccccccccccC
Q 011842 215 I-SGEIDCADFKAKL-LQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKA 289 (476)
Q Consensus 215 ~-~g~~D~~~Le~~l-~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~ 289 (476)
+ ++.+|+++|++++ ..+++ +|++++++|++|.+.| +++|+++|++||+ ++++|++|+.+.+......
T Consensus 164 ~~~~~~d~~~l~~~l~~~~~~---~v~l~~p~nptG~~~~~~~l~~i~~~a~~~~~-----~li~De~~~~~~~~~~~~~ 235 (437)
T 3g0t_A 164 EYRGEKLREKLESYLQTGQFC---SIIYSNPNNPTWQCMTDEELRIIGELATKHDV-----IVIEDLAYFGMDFRKDYSH 235 (437)
T ss_dssp GGCTTHHHHHHHHHHTTTCCC---EEEEESSCTTTCCCCCHHHHHHHHHHHHHTTC-----EEEEECTTTTCCTTSCCCS
T ss_pred CCCCccCHHHHHHHHhcCCce---EEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCc-----EEEEEcchhhcccCCCcCc
Confidence 4 4579999999999 44444 7778889999999976 7788999999999 9999999987654311111
Q ss_pred ---CC--CCCc--ccccEEEEcCCCCCC-CCCCceeEEeehhhhh-h-----------------hcCCccccCCCCCccc
Q 011842 290 ---PK--VSFK--KPIGSVSVSGHKFVG-CPMPCGVQITRMEHIN-V-----------------LSSNVEYLASRDATIM 343 (476)
Q Consensus 290 ---~~--~~~~--~~~Dsi~~s~hK~l~-~p~~~G~l~~~~~~~~-~-----------------l~~~~~yl~~~~~~~~ 343 (476)
+. ..+. ...++++.++||+++ .++++|++++++++++ . +.....+ ..
T Consensus 236 ~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~ 308 (437)
T 3g0t_A 236 PGEPLYQPSVANYTDNYILALSSSKAFSYAGQRIGVLMISGKLYEREYPDLEESFGRLRFGEALSSSALYA-------LS 308 (437)
T ss_dssp TTSSCCCCCGGGTCSCEEEEEESTTTTSCGGGCCEEEEECHHHHHCBCGGGHHHHSCSBHHHHHHTTHHHH-------HH
T ss_pred ccccchhhccCCCCCcEEEEEcCccCCCCccceeEEEEECHHHhhhhhhcccccccccchhHHHHHHHHhh-------hc
Confidence 00 1221 235688899999997 7788999999988766 5 2211100 01
Q ss_pred CCCCChhHHHHHHHHHHhChh--c---HHHHHHHHHHHHHHHHHHHHhcCCeEe------ec-CCeeEEEEecC--CcHH
Q 011842 344 GSRNGHAPIFLWYTLNRKGYK--G---FQKEVQKCLRNAHYLKDRLLDAGISAM------LN-ELSSTVVFERP--QDEE 409 (476)
Q Consensus 344 ~sr~~~~~l~~~~~l~~~g~~--g---~~~~~~~~~~~a~~l~~~L~~~g~~~~------~~-~~~~iv~f~~~--~~~~ 409 (476)
.+.+ .+.++++...+... . +++..++..++++++.+.|++.|+... .+ ...+++.+..+ +..+
T Consensus 309 ~~~~---~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (437)
T 3g0t_A 309 SGAT---HSAQWGMAAMLKACNDGEYNFRDSVIEYGRKARIMKKMFLDNGFNIVYDKDGNEPLADGFYFTVGYKGMDSSK 385 (437)
T ss_dssp SSSC---HHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHTTTEEESSCEETTEECCSSSEEEEEETTCCHHH
T ss_pred CCCC---HHHHHHHHHHHhCcHhHHHHHHHHHHHHHHHHHHHHHHHHHcCCEEeccccCCCCCceeEEEEEecCCCCHHH
Confidence 1222 23344443333221 1 788899999999999999999976554 24 45566666655 2233
Q ss_pred Hh-----hceeeccc-------CCEEEEEEcCCCCHHHHHHHHHHHHHHHH
Q 011842 410 FV-----RRWQLACQ-------GNIAHVVVMPNVTIDKLDDFLNELIENRS 448 (476)
Q Consensus 410 ~~-----~~~~l~~~-------~~~lRv~~~~~~T~edid~~~~~l~~~~~ 448 (476)
+. +++.+... .+.+|++++ ..|+++|++++++|+++.+
T Consensus 386 l~~~L~~~gi~v~~~~~~~~~~~~~iRis~~-~~~~e~i~~~~~~l~~~~~ 435 (437)
T 3g0t_A 386 LIEKFVRYGMCAITLKTTGSKRNEAMRICTS-LLPESQFPDLEKRLQMLNA 435 (437)
T ss_dssp HHHHHHHTTEECEESTTTTCCCTTCEEEECS-SSCGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHcCeEEeeccccCCCCCCEEEEEEe-cCCHHHHHHHHHHHHHHHh
Confidence 32 23333211 167999988 4499999999999988764
No 53
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.94 E-value=6.3e-26 Score=229.53 Aligned_cols=296 Identities=13% Similarity=0.042 Sum_probs=218.4
Q ss_pred CccchhhHHHHHHHHHHHHHHcCCCCCcccEEE-cCCchhHHHHHHHHHHhhCCCcEEEecCCCchHH--HHHHHHcCCe
Q 011842 131 SNYGVHSRQFEVGVLDWFARLWELENNEYWGYI-TNCGTEGNLHGILVGREVFPDGILYASRESHYSV--FKAARMYRME 207 (476)
Q Consensus 131 ~~~~~~~~~le~~~~~~la~l~g~~~~~~~g~~-t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~--~~~~~~~G~~ 207 (476)
++.+....++.+++++.+++++|.++ ++.++| |+|||+|+..++.......+++.+++...+|++. .+.++..|+.
T Consensus 50 ~hr~~~~~~~~~~ar~~la~ll~~~~-~~evif~t~~~T~a~n~a~~~l~~~~~Gd~v~~~~~g~~~~~~~~~a~~~G~~ 128 (377)
T 3e77_A 50 SHRSSDFAKIINNTENLVRELLAVPD-NYKVIFLQGGGCGQFSAVPLNLIGLKAGRCADYVVTGAWSAKAAEEAKKFGTI 128 (377)
T ss_dssp CTTSHHHHHHHHHHHHHHHHHHTCCT-TEEEEEESSHHHHHHHHHHHHHGGGSTTCEEEECCCSHHHHHHHHHHTTTSEE
T ss_pred CCCCHHHHHHHHHHHHHHHHHhCCCC-CCeEEEEcCchHHHHHHHHHhccCCCCCCeEEEEECCHHHHHHHHHHHHhCCc
Confidence 34444567888899999999999974 355888 5899999999988776534578888777788764 3455566877
Q ss_pred EEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccc
Q 011842 208 CVKVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVK 287 (476)
Q Consensus 208 v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~ 287 (476)
++.++.+.++..+++.++..+.++++ +|.+++.+|.+|.+.|+ +|+++|+ ++|||++++.+..|
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~i~~~t~---lV~~~h~et~tG~~~pi-----i~~~~~~-----~~~vD~~q~~g~~~--- 192 (377)
T 3e77_A 129 NIVHPKLGSYTKIPDPSTWNLNPDAS---YVYYCANETVHGVEFDF-----IPDVKGA-----VLVCDMSSNFLSKP--- 192 (377)
T ss_dssp EECSCCCSSSCSCCCGGGCCCCTTCS---CEEEESEETTTTEECSS-----CCCCTTC-----CEEEECTTTTTSSC---
T ss_pred eEEeccCCCcCCCCChHHhccCCCcc---EEEEeCccCchheEchh-----hhccCCC-----EEEEEcccccCCCC---
Confidence 77788876677788777766665555 78888999999999998 4778999 99999999988777
Q ss_pred cCCCCCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhc-CCccccCC----CCCcccCCCCChhHHHHHHHHHHhC
Q 011842 288 KAPKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLS-SNVEYLAS----RDATIMGSRNGHAPIFLWYTLNRKG 362 (476)
Q Consensus 288 ~~~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~-~~~~yl~~----~~~~~~~sr~~~~~l~~~~~l~~~g 362 (476)
+++.+ .|.+++++|||++ |.|+|++++|+++++.+. ..+.|+.. ......+|.+....+.+..+++++.
T Consensus 193 ----id~~~-~~~~~~s~~K~~g-p~G~g~l~~~~~~l~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~ 266 (377)
T 3e77_A 193 ----VDVSK-FGVIFAGAQKNVG-SAGVTVVIVRDDLLGFALRECPSVLEYKVQAGNSSLYNTPPCFSIYVMGLVLEWIK 266 (377)
T ss_dssp ----CCGGG-CSEEEEEGGGTTS-CTTCEEEEEETTSCSCCCTTSCGGGCHHHHHTTTTCSSCCCHHHHHHHHHHHHHHH
T ss_pred ----Cchhh-cCEEEEecccccC-CCccEEEEEcHHHHhhccCCCCchhhHHHHhhcCCCCCCchHHHHHHHHHHHHHHH
Confidence 55543 3568899999996 999999999998765443 22334320 1122345666556677778888887
Q ss_pred hh-cHHHHHHHHHHHHHHHHHHHHhc-CCeEee-cC--Ce-eEEEEecCC---cH----HHhh-----ceeeccc---CC
Q 011842 363 YK-GFQKEVQKCLRNAHYLKDRLLDA-GISAML-NE--LS-STVVFERPQ---DE----EFVR-----RWQLACQ---GN 421 (476)
Q Consensus 363 ~~-g~~~~~~~~~~~a~~l~~~L~~~-g~~~~~-~~--~~-~iv~f~~~~---~~----~~~~-----~~~l~~~---~~ 421 (476)
.. |++++.++..+++++|++.|++. |+.... .+ .+ .+++|..++ +. .+.. ++.+... .+
T Consensus 267 ~~GG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~~~~~~~~~~~~~~l~~l~~~Gi~~~~g~~~~g 346 (377)
T 3e77_A 267 NNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFRIGNAKGDDALEKRFLDKALELNMLSLKGHRSVG 346 (377)
T ss_dssp HTTHHHHHHHHHHHHHHHHHHHHHTSTTSEECCSCGGGBCSSEEEEEESSTTCCHHHHHHHHHHHHHTTEESCBCCTTTC
T ss_pred HccCHHHHHHHHHHHHHHHHHHHHhcCCceecCCCHHHcCCcEEEEEcCCCCCchhHHHHHHHHHHHCCcEEeCCCCcCC
Confidence 77 89999999999999999999998 554322 11 23 368888774 11 2322 2222111 25
Q ss_pred EEEEEEcCCCCHHHHHHHHHHHHHHHHH
Q 011842 422 IAHVVVMPNVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 422 ~lRv~~~~~~T~edid~~~~~l~~~~~~ 449 (476)
.+|++++.++|++|||+|+++|+++.++
T Consensus 347 ~iRiS~~~~~t~edId~l~~al~~~~~~ 374 (377)
T 3e77_A 347 GIRASLYNAVTIEDVQKLAAFMKKFLEM 374 (377)
T ss_dssp SEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 6999999999999999999999998764
No 54
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.94 E-value=1e-24 Score=222.44 Aligned_cols=284 Identities=14% Similarity=0.132 Sum_probs=208.7
Q ss_pred HHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCC
Q 011842 138 RQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISG 217 (476)
Q Consensus 138 ~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g 217 (476)
.++.+++++++++++|.+ .+++|+|||+|+..++.++.. |++.|+++.++|.++..+++..|++++.+|+
T Consensus 87 ~~~~~~l~~~la~~~g~~----~v~~~~ggt~a~~~~~~~~~~--~gd~V~~~~p~~~~~~~~~~~~g~~~~~v~~---- 156 (398)
T 3a2b_A 87 LDIHVELEEKLSAYVGKE----AAILFSTGFQSNLGPLSCLMG--RNDYILLDERDHASIIDGSRLSFSKVIKYGH---- 156 (398)
T ss_dssp CHHHHHHHHHHHHHHTCS----EEEEESSHHHHHHHHHHHSSC--TTCEEEEETTCCHHHHHHHHHSSSEEEEECT----
T ss_pred cHHHHHHHHHHHHHhCCC----cEEEECCHHHHHHHHHHHHhC--CCCEEEECCccCHHHHHHHHHcCCceEEeCC----
Confidence 377888999999999974 399999999999999988765 8999999999999999999999999999986
Q ss_pred ccCHHHHHHHHHcCCC-CcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccc-cccC-CCCCC
Q 011842 218 EIDCADFKAKLLQNKD-KPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPF-VKKA-PKVSF 294 (476)
Q Consensus 218 ~~D~~~Le~~l~~~~~-~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~-~~~~-~~~~~ 294 (476)
+|+++|++++.+... ++.+|+++++.+++|.+.|+++|.++|++||+ ++++|++|+.+.+.. .... ..+..
T Consensus 157 -~d~~~l~~~l~~~~~~~~~~v~~~~~~nptG~~~~~~~l~~~~~~~~~-----~li~De~~~~~~~~~~~~~~~~~~~~ 230 (398)
T 3a2b_A 157 -NNMEDLRAKLSRLPEDSAKLICTDGIFSMEGDIVNLPELTSIANEFDA-----AVMVDDAHSLGVIGHKGAGTASHFGL 230 (398)
T ss_dssp -TCHHHHHHHHHTSCSSSCEEEEEESBCTTTCCBCCHHHHHHHHHHHTC-----EEEEECTTTTTTSSGGGCCHHHHHTC
T ss_pred -CCHHHHHHHHHhhccCCceEEEEeCCCCCCCCccCHHHHHHHHHHcCc-----EEEEECCCcccccCCCCCchHhhcCC
Confidence 489999999987422 45688888899999999999999999999999 999999997654311 1110 00111
Q ss_pred cccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCC-ccccCCCCCcccCCCCChhHH-HHHHHHHHhChhcHHHHHHH
Q 011842 295 KKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSN-VEYLASRDATIMGSRNGHAPI-FLWYTLNRKGYKGFQKEVQK 372 (476)
Q Consensus 295 ~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~-~~yl~~~~~~~~~sr~~~~~l-~~~~~l~~~g~~g~~~~~~~ 372 (476)
.+.+|+++.++||+++ |.| |++++++++++.+... ..|... ++. ..... .+..+++.+ +.+++..++
T Consensus 231 ~~~~di~~~s~sK~~~-~~G-G~~~~~~~~~~~l~~~~~~~~~~------~~~-~~~~~a~~~~~l~~~--~~~~~~~~~ 299 (398)
T 3a2b_A 231 NDDVDLIMGTFSKSLA-SLG-GFVAGDADVIDFLKHNARSVMFS------ASM-TPASVASTLKALEII--QNEPEHIEK 299 (398)
T ss_dssp GGGCSEEEEESSSTTC-SSC-EEEEECHHHHHHHHHHCHHHHSS------BCC-CHHHHHHHHHHHHHH--HHCTHHHHH
T ss_pred CcCCeEEEeccccccc-CCC-cEEEeCHHHHHHHHHhcccceec------CCC-CHHHHHHHHHHHHHH--hhCHHHHHH
Confidence 2247999999999998 556 9999988776655331 222211 111 11112 223444442 234577888
Q ss_pred HHHHHHHHHHHHHhcCCeEeecCCeeEEEEecCCc---HHHh-----hceeecc--------cCCEEEEEEcCCCCHHHH
Q 011842 373 CLRNAHYLKDRLLDAGISAMLNELSSTVVFERPQD---EEFV-----RRWQLAC--------QGNIAHVVVMPNVTIDKL 436 (476)
Q Consensus 373 ~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~~---~~~~-----~~~~l~~--------~~~~lRv~~~~~~T~edi 436 (476)
..++++++.+.|++.|+... ++.++++.+..+.. .++. +++.+.. ..+.+|++++..+|++++
T Consensus 300 ~~~~~~~l~~~L~~~g~~~~-~~~g~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~iRis~~~~~~~e~i 378 (398)
T 3a2b_A 300 LWKNTDYAKAQLLDHGFDLG-ATESPILPIFIRSNEKTFWVTKMLQDDGVFVNPVVSPAVPAEESLIRFSLMATHTYDQI 378 (398)
T ss_dssp HHHHHHHHHHHHHHTTCCBC-SCCSSEEEEECCCHHHHHHHHHHHHHTTEECEEECTTTSCGGGCEEEEECCTTCCHHHH
T ss_pred HHHHHHHHHHHHHhcCCCcC-CCCCCEEEEEcCCHHHHHHHHHHHHHCCcEEEeeCCCCCCCCCceEEEEEeCCCCHHHH
Confidence 88999999999999876543 44566777776642 2222 2333321 246899999999999999
Q ss_pred HHHHHHHHHHHHH
Q 011842 437 DDFLNELIENRST 449 (476)
Q Consensus 437 d~~~~~l~~~~~~ 449 (476)
++++++|+++.++
T Consensus 379 ~~~~~~l~~~l~~ 391 (398)
T 3a2b_A 379 DEAIEKMVKVFKQ 391 (398)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999988765
No 55
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=99.94 E-value=6.5e-25 Score=222.99 Aligned_cols=292 Identities=10% Similarity=0.031 Sum_probs=211.4
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCccc-EEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCC
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYW-GYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCL 214 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~-g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~ 214 (476)
+..++++++.+++.+.+|.+.+..+ +++|+||++|+..++.++.. |++.|++++++|.++..+++..|++++.+|.+
T Consensus 64 g~~~l~~~la~~~~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~--~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~ 141 (389)
T 1gd9_A 64 GLLELREAIAEKLKKQNGIEADPKTEIMVLLGANQAFLMGLSAFLK--DGEEVLIPTPAFVSYAPAVILAGGKPVEVPTY 141 (389)
T ss_dssp CCHHHHHHHHHHHHHHHCCCCCTTTSEEEESSTTHHHHHHHTTTCC--TTCEEEEEESCCTTHHHHHHHHTCEEEEEECC
T ss_pred CcHHHHHHHHHHHHHHhCCCCCCCCeEEEcCChHHHHHHHHHHhCC--CCCEEEEcCCCchhHHHHHHHCCCEEEEeccC
Confidence 4569999999999998896544456 99999999999999887754 88999999999999999999999999999987
Q ss_pred C--CCccCHHHHHHHHHcCCCCcEEEEEeeCCCcccccc---CHHHHHHHHHHhCCCCCceEEEEecCcccccccccccC
Q 011842 215 I--SGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVD---DLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKA 289 (476)
Q Consensus 215 ~--~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id---~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~ 289 (476)
+ ++.+|+++|++++.++ +.+|++++++|++|.+. ++++|+++|++||+ ++++|++|+++.+......
T Consensus 142 ~~~~~~~d~~~l~~~l~~~---~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~-----~li~De~~~~~~~~~~~~~ 213 (389)
T 1gd9_A 142 EEDEFRLNVDELKKYVTDK---TRALIINSPCNPTGAVLTKKDLEEIADFVVEHDL-----IVISDEVYEHFIYDDARHY 213 (389)
T ss_dssp GGGTTCCCHHHHHHHCCTT---EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTC-----EEEEECTTTTCBCTTCCCC
T ss_pred CccCCCCCHHHHHHhcCcC---ceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCC-----EEEEehhhhhcccCCCCCC
Confidence 5 4578999999998654 34777789999999986 59999999999999 9999999987665321111
Q ss_pred CCCCCc--ccccEEEEcCCCCCC-CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhC--hh
Q 011842 290 PKVSFK--KPIGSVSVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKG--YK 364 (476)
Q Consensus 290 ~~~~~~--~~~Dsi~~s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g--~~ 364 (476)
+...+. ...|+++.++||+++ .++++|++++++++++.+.....+. ..+.+ .+.++++...+. ..
T Consensus 214 ~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~-------~~~~~---~~~~~a~~~~l~~~~~ 283 (389)
T 1gd9_A 214 SIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAPSWIIERMVKFQMYN-------ATCPV---TFIQYAAAKALKDERS 283 (389)
T ss_dssp CGGGSTTCGGGEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHHHHTTT-------TCSCC---HHHHHHHHHHHTCHHH
T ss_pred CHhhccCCCCCEEEEecChhhcCCcccceEEEEECHHHHHHHHHHHhhh-------ccCCC---HHHHHHHHHHHhCCCc
Confidence 112221 237899999999997 5577999999987766553221111 11111 334444444432 23
Q ss_pred --cHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecC----CcHHH----h--hceeecc-------cCCEEEE
Q 011842 365 --GFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERP----QDEEF----V--RRWQLAC-------QGNIAHV 425 (476)
Q Consensus 365 --g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~----~~~~~----~--~~~~l~~-------~~~~lRv 425 (476)
.+++..++..++++++.+.|++.|+....++....+.+..+ +..++ . +++.+.. ..+.+|+
T Consensus 284 ~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi 363 (389)
T 1gd9_A 284 WKAVEEMRKEYDRRRKLVWKRLNEMGLPTVKPKGAFYIFPRIRDTGLTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRI 363 (389)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCBTTEECCBCGGGTCCHHHHHHHHHHHTCEECEEGGGGCGGGTTBEEE
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHcCCeecCCCeeeEEEEeccCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEE
Confidence 56778888899999999999998764433333334444543 22222 2 2333321 2468999
Q ss_pred EEcCCCCHHHHHHHHHHHHHHHHH
Q 011842 426 VVMPNVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 426 ~~~~~~T~edid~~~~~l~~~~~~ 449 (476)
++.. ++++|+.+++.|.++.++
T Consensus 364 ~~~~--~~~~i~~~l~~l~~~~~~ 385 (389)
T 1gd9_A 364 SYAT--AYEKLEEAMDRMERVLKE 385 (389)
T ss_dssp ECCS--CHHHHHHHHHHHHHHHHH
T ss_pred EecC--CHHHHHHHHHHHHHHHHh
Confidence 9774 899999999999888654
No 56
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.94 E-value=4.5e-25 Score=224.69 Aligned_cols=289 Identities=12% Similarity=0.093 Sum_probs=212.7
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCC
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLI 215 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~ 215 (476)
+..++++++.+++.+.+|++.+...+++|+|||+|+..++.++.. |++.|++++++|.++...++..|++++.+|.++
T Consensus 79 g~~~lr~~la~~~~~~~g~~~~~~~v~~~~g~t~al~~~~~~l~~--~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~ 156 (389)
T 1o4s_A 79 GIYELREGIAKRIGERYKKDISPDQVVVTNGAKQALFNAFMALLD--PGDEVIVFSPVWVSYIPQIILAGGTVNVVETFM 156 (389)
T ss_dssp CCHHHHHHHHHHHHHHHTCCCCGGGEEEESHHHHHHHHHHHHHCC--TTCEEEEEESCCTTHHHHHHHTTCEEEEEECCG
T ss_pred CCHHHHHHHHHHHHHHhCCCCCHHHEEEecCHHHHHHHHHHHhCC--CCCEEEEcCCCchhHHHHHHHcCCEEEEEecCC
Confidence 457999999999999888753345699999999999999988754 899999999999999999999999999999874
Q ss_pred --CCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCcccccccccccCC
Q 011842 216 --SGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAP 290 (476)
Q Consensus 216 --~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~ 290 (476)
++.+|+++|++++.++ +.+|++++++|++|.+.| +++|+++|++||+ ++++|++|+.+.+.. ...+
T Consensus 157 ~~~~~~d~~~l~~~l~~~---~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~-----~li~Dea~~~~~~~g-~~~~ 227 (389)
T 1o4s_A 157 SKNFQPSLEEVEGLLVGK---TKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNF-----YIISDEVYDSLVYTD-EFTS 227 (389)
T ss_dssp GGTTCCCHHHHHHTCCTT---EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTC-----EEEEECTTTTSBCSS-CCCC
T ss_pred ccCCCCCHHHHHHhcccC---ceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCC-----EEEEEccccccccCC-CCCC
Confidence 4678999999998654 347778889999999966 9999999999999 999999998765532 1111
Q ss_pred CCCCc--ccccEEEEcCCCCCC-CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHH
Q 011842 291 KVSFK--KPIGSVSVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQ 367 (476)
Q Consensus 291 ~~~~~--~~~Dsi~~s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~ 367 (476)
...+. ...|+++.++||+++ .++++|++++++++++.+.....+. ..+ ...+.+++++..+.. +++
T Consensus 228 ~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~l~~~~~~~~~l~~~~~~~-------~~~---~~~~~~~a~~~~l~~-~~~ 296 (389)
T 1o4s_A 228 ILDVSEGFDRIVYINGFSKSHSMTGWRVGYLISSEKVATAVSKIQSHT-------TSC---INTVAQYAALKALEV-DNS 296 (389)
T ss_dssp HHHHCSSSTTEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHHHHHHH-------TCS---CCHHHHHHHHHHTTC-CCH
T ss_pred HhhcCCCCCcEEEEeechhhcCCcccceEEEEeCHHHHHHHHHHhhhc-------ccC---CCHHHHHHHHHHHhc-cHH
Confidence 11111 237899999999997 5667999999988765553221111 011 124555666666643 378
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecC-CcHHHh------hceeecc-----cCCEEEEEEcCCCCHHH
Q 011842 368 KEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERP-QDEEFV------RRWQLAC-----QGNIAHVVVMPNVTIDK 435 (476)
Q Consensus 368 ~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~-~~~~~~------~~~~l~~-----~~~~lRv~~~~~~T~ed 435 (476)
+..++..++++++.+.|++.|+....+....++++..+ +..++. +++.+.. ..+.+|+++. +|+++
T Consensus 297 ~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~Ris~~--~~~~~ 374 (389)
T 1o4s_A 297 YMVQTFKERKNFVVERLKKMGVKFVEPEGAFYLFFKVRGDDVKFCERLLEEKKVALVPGSAFLKPGFVRLSFA--TSIER 374 (389)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCCCCSBSSEEEEECSSCHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECC--SCHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCeeecCCcceEEEEeCCCCHHHHHHHHHHHCCEEEeCchhcCCCCeEEEEEe--CCHHH
Confidence 88889999999999999988765443333344555554 333222 2333321 1368999887 49999
Q ss_pred HHHHHHHHHHHHH
Q 011842 436 LDDFLNELIENRS 448 (476)
Q Consensus 436 id~~~~~l~~~~~ 448 (476)
|+.+++.|.++.+
T Consensus 375 l~~~l~~l~~~l~ 387 (389)
T 1o4s_A 375 LTEALDRIEDFLN 387 (389)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHh
Confidence 9999999987653
No 57
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.94 E-value=3.3e-25 Score=227.20 Aligned_cols=291 Identities=14% Similarity=0.111 Sum_probs=213.0
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCC
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLI 215 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~ 215 (476)
+..++++++.+++.+.+|.+.+...+++|+|||+|+..++.++.. +++.|++++++|.++..+++..|++++.+|.++
T Consensus 80 g~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~t~a~~~~~~~~~~--~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~ 157 (409)
T 2gb3_A 80 GIWELREAFASYYKRRQRVDVKPENVLVTNGGSEAILFSFAVIAN--PGDEILVLEPFYANYNAFAKIAGVKLIPVTRRM 157 (409)
T ss_dssp CCHHHHHHHHHHHHHTSCCCCCGGGEEEESHHHHHHHHHHHHHCC--TTCEEEEEESCCTHHHHHHHHHTCEEEEEECCG
T ss_pred CcHHHHHHHHHHHHHHhCCCCCHHHEEEeCCHHHHHHHHHHHhCC--CCCEEEEcCCCchhHHHHHHHcCCEEEEeccCC
Confidence 457999999999999888765556799999999999999988754 899999999999999999999999999999875
Q ss_pred --CCccCHHHHHHHHHcCCCCcEEEEEeeCCCcccccc---CHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCC
Q 011842 216 --SGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVD---DLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAP 290 (476)
Q Consensus 216 --~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id---~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~ 290 (476)
+..+ +++|++++.++ +.+|++++++|++|.+. ++++|+++|++||+ ++++|++|+++.+.. ...+
T Consensus 158 ~~~~~~-~~~l~~~l~~~---~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~-----~li~Dea~~~~~~~~-~~~~ 227 (409)
T 2gb3_A 158 EEGFAI-PQNLESFINER---TKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGL-----FLIVDEVYSEIVFRG-EFAS 227 (409)
T ss_dssp GGTSCC-CTTGGGGCCTT---EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTC-----EEEEECTTTTCBCSS-CCCC
T ss_pred CCCCcc-HHHHHHhhCcC---CeEEEECCCCCCCCCCcCHHHHHHHHHHHHHcCC-----EEEEECcccccccCC-CCCC
Confidence 3344 78888887653 44777888999999984 58999999999999 999999998765432 2211
Q ss_pred CCCCcccccEEEEcCCCCCC-CCCCceeEEeeh-hhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHh--ChhcH
Q 011842 291 KVSFKKPIGSVSVSGHKFVG-CPMPCGVQITRM-EHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRK--GYKGF 366 (476)
Q Consensus 291 ~~~~~~~~Dsi~~s~hK~l~-~p~~~G~l~~~~-~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~--g~~g~ 366 (476)
.+......|+++.++||+++ .++++|++++++ ++++.+.....+. . +. ..+.++++...+ +...+
T Consensus 228 ~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~l~~~l~~~~~~~-------~-~~---~~~~~~a~~~~l~~~~~~~ 296 (409)
T 2gb3_A 228 ALSIESDKVVVIDSVSKKFSACGARVGCLITRNEELISHAMKLAQGR-------L-AP---PLLEQIGSVGLLNLDDSFF 296 (409)
T ss_dssp GGGSCCTTEEEEEESTTTTTCGGGCCEEEECSCHHHHHHHHHHHHHS-------C-CC---CHHHHHHHHHHHTCCHHHH
T ss_pred ccccCCCCEEEEecchhccCCccceEEEEEECcHHHHHHHHHHHhcc-------C-CC---CHHHHHHHHHHHhccHHHH
Confidence 11111236899999999997 556799999998 7765553211111 0 11 234444444444 44567
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCeEeecCC-eeEEEEecC--CcHH----Hhh-------ceeecc----------cCCE
Q 011842 367 QKEVQKCLRNAHYLKDRLLDAGISAMLNEL-SSTVVFERP--QDEE----FVR-------RWQLAC----------QGNI 422 (476)
Q Consensus 367 ~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~-~~iv~f~~~--~~~~----~~~-------~~~l~~----------~~~~ 422 (476)
++..++..++++++.+.|++.|+.....+. ..++++..+ +..+ +.+ ++.+.. ..+.
T Consensus 297 ~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~gi~v~~g~~f~~~~~~~~~~ 376 (409)
T 2gb3_A 297 DFVRETYRERVETVLKKLEEHGLKRFTKPSGAFYITAELPVEDAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKE 376 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCBCCCSBSSEEEEECSSSCHHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSE
T ss_pred HHHHHHHHHHHHHHHHHHHHcCceeeeCCCeeEEEEEEeCCCCHHHHHHHHHhccccccCcEEEeCchHhCCCCCCCCCE
Confidence 788888999999999999988765413343 344444554 2222 222 333321 2468
Q ss_pred EEEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 011842 423 AHVVVMPNVTIDKLDDFLNELIENRSTWY 451 (476)
Q Consensus 423 lRv~~~~~~T~edid~~~~~l~~~~~~~~ 451 (476)
+|+++. +|+++|+++++.|+++.+++.
T Consensus 377 iRis~~--~~~e~i~~~~~~l~~~l~~~~ 403 (409)
T 2gb3_A 377 IRIACV--LEKDLLSRAIDVLMEGLKMFC 403 (409)
T ss_dssp EEEECC--SCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeC--CCHHHHHHHHHHHHHHHHHhh
Confidence 998877 899999999999999987764
No 58
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.94 E-value=1.2e-24 Score=225.22 Aligned_cols=344 Identities=15% Similarity=0.074 Sum_probs=224.2
Q ss_pred ccCCCCCcHHHHHHHHHHHHhccc---ccccC--CCCcCCcchHHHHHHH--HHhhCCCCCCcccCccchhhHHHHHHHH
Q 011842 73 FTGDKEAYMAGVLARYRKTLMERT---KHHLG--YPYNLDFDYGALAQLQ--HFSINNLGDPFIESNYGVHSRQFEVGVL 145 (476)
Q Consensus 73 ~~~~~~~~~~~il~~~~~~~~~~~---~~~~g--~p~~~~~~~~~l~~~l--~~~~n~~g~~~~~~~~~~~~~~le~~~~ 145 (476)
++| .+.+..++++++......+. ..++| .|.. ..+..+.+++ ...+... .++. +....+..+++.+++
T Consensus 40 ~lp-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~~~--~~p~~v~~~~~~~~~~~~~-~~~~-~~~~~g~~~~~~~~~ 114 (438)
T 1wyu_A 40 DLP-EPLPEWKVLEELRRLAAQNLPAHKAFLGGGVRSH--HVPPVVQALAARGEFLTAY-TPYQ-PEVSQGVLQATFEYQ 114 (438)
T ss_dssp CCC-CCCCHHHHHHHHHHHHHTSCCCTTCCCCSSCCCC--CCCHHHHHHHTSHHHHHCC-SCCS-GGGCHHHHHHHHHHH
T ss_pred CCC-CCCCHHHHHHHHHHHHhcCcCccccccCCCccCC--cCcHHHHHHHhcchhhhcC-CCCc-chhhhhHHHHHHHHH
Confidence 466 67778899999887765432 12333 2221 1234444444 2222221 1111 112346778999999
Q ss_pred HHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHH----HHcCCeEEEEeCCCCCccCH
Q 011842 146 DWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAA----RMYRMECVKVDCLISGEIDC 221 (476)
Q Consensus 146 ~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~----~~~G~~v~~v~~~~~g~~D~ 221 (476)
+++++++|++. .++++|+|+|.++..++.+.+ ..++++|+++++.|.++...+ +..|++++.++. +++.+|+
T Consensus 115 ~~la~~~g~~~--~~i~~~~g~taa~ea~~~a~~-~~~gd~Viv~~~~h~s~~~~~~~~a~~~G~~v~~v~~-~~~~~d~ 190 (438)
T 1wyu_A 115 TMIAELAGLEI--ANASMYDGATALAEGVLLALR-ETGRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLTLPL-EGGRTPL 190 (438)
T ss_dssp HHHHHHHTSSE--ECSCBSSHHHHHHHHHHHHHH-HHTCCEEEEETTSCHHHHHHHHHHHHHTTCEEEEECC-BTTBCCC
T ss_pred HHHHHHhCCCc--cceEEeCcHHHHHHHHHHHHh-cCCCCEEEEcCccCHhHHHHHHHHHHHCCCEEEEEcC-cCCccCH
Confidence 99999999974 347899999943332222222 238899999999999987554 558999999997 5678887
Q ss_pred HHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecC-cccccccccccCCCCCCcccccE
Q 011842 222 ADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGA-LFGLMMPFVKKAPKVSFKKPIGS 300 (476)
Q Consensus 222 ~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a-~~g~~~~~~~~~~~~~~~~~~Ds 300 (476)
++ |.+ ++.+|+++++ |++|.+.|+++|+++|++||+ |+|+|.. ++.+... .....++|+
T Consensus 191 ~~----i~~---~t~~v~i~~p-n~tG~~~~l~~i~~la~~~g~-----~vivd~d~~a~g~~~-------~~~~~g~D~ 250 (438)
T 1wyu_A 191 PE----VGE---EVGAVVVQNP-NFLGALEDLGPFAEAAHGAGA-----LFVAVADPLSLGVLK-------PPGAYGADI 250 (438)
T ss_dssp CC----CCT---TEEEEEEESS-CTTSBCCCHHHHHHHHHHTTC-----EEEEECCTTGGGTBC-------CHHHHTCSE
T ss_pred HH----hCC---CeEEEEEECC-CCCeEEecHHHHHHHHHHcCC-----EEEEEechhhccCcC-------CCccCCCCE
Confidence 76 433 3458888888 999999999999999999999 9997744 3222211 111124899
Q ss_pred EEEcCCC-----CCCCCCCceeEEeehhhhhhhcCC-----------ccccCCC---C---CcccCCCCC---hhHHHHH
Q 011842 301 VSVSGHK-----FVGCPMPCGVQITRMEHINVLSSN-----------VEYLASR---D---ATIMGSRNG---HAPIFLW 355 (476)
Q Consensus 301 i~~s~hK-----~l~~p~~~G~l~~~~~~~~~l~~~-----------~~yl~~~---~---~~~~~sr~~---~~~l~~~ 355 (476)
+++|+|| |+++| ++|++++++++.+.+... ..|...- . ....++.+. ....+++
T Consensus 251 ~~~s~kk~~~~~~~~Gp-~~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~l~~~~~~~r~~~~t~~~~~~~~~~a~~ 329 (438)
T 1wyu_A 251 AVGDGQSLGLPMGFGGP-HFGFLATKKAFVRQLPGRLVSETVDVEGRRGFILTLQAREQYIRRAKAKSNITTNAQLTALM 329 (438)
T ss_dssp EEEECTTTTCCCGGGCS-CCEEEEECGGGGGGCCSCCEEEEEBTTSCEEEEECCGGGSHHHHGGGSSCCCCSCCHHHHHH
T ss_pred EEECCcccCCCccCCCC-CeeEEEEcHHHHHhCCCceeccccccCCCcceeeeccccccccchhcccCCccchHHHHHHH
Confidence 9999888 66666 999999998876655221 0111000 0 000122221 2223333
Q ss_pred HH--HHHhChhcHHHHHHHHHHHHHHHHHHHHhc-CCeEeec-CCeeEEEEecC-CcHHHh-----hceee--cc----c
Q 011842 356 YT--LNRKGYKGFQKEVQKCLRNAHYLKDRLLDA-GISAMLN-ELSSTVVFERP-QDEEFV-----RRWQL--AC----Q 419 (476)
Q Consensus 356 ~~--l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~-g~~~~~~-~~~~iv~f~~~-~~~~~~-----~~~~l--~~----~ 419 (476)
++ +..++.++++++.++..++++++.+.|++. |+....+ +...++.|..+ +..++. +++.+ .. .
T Consensus 330 aa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gi~v~~~~~~~~~ 409 (438)
T 1wyu_A 330 GAMYLAALGPEGLREVALKSVEMAHKLHALLLEVPGVRPFTPKPFFNEFALALPKDPEAVRRALAERGFHGATPVPREYG 409 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCEECSCSSBCSEEEEECSSCHHHHHHHHHHTTCCCCEECCTTSC
T ss_pred HHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCeEECCCCCeEEEEEEeCCCCHHHHHHHHHHCCceeccccccccC
Confidence 33 777778889999999999999999999998 6654433 22344556554 223332 23444 21 2
Q ss_pred CCEEEEEEcCCCCHHHHHHHHHHHHHH
Q 011842 420 GNIAHVVVMPNVTIDKLDDFLNELIEN 446 (476)
Q Consensus 420 ~~~lRv~~~~~~T~edid~~~~~l~~~ 446 (476)
.+.+|+++++.+|++||++++++|+++
T Consensus 410 ~~~lRis~~~~~t~edi~~~~~~l~~~ 436 (438)
T 1wyu_A 410 ENLALFAATELHEEEDLLALREALKEV 436 (438)
T ss_dssp SSEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred CCeEEEEecccCCHHHHHHHHHHHHHH
Confidence 578999999999999999999999875
No 59
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=99.94 E-value=5.6e-25 Score=223.67 Aligned_cols=289 Identities=14% Similarity=0.054 Sum_probs=207.8
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCC
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLI 215 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~ 215 (476)
+..++++++.+++.+..|.+.+..++++|+||++|+..++.+..+ ||+.|+++.++|.++...++..|++++.+|+++
T Consensus 69 g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~g~~~al~~~~~~l~~--~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~ 146 (385)
T 1b5p_A 69 GIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILD--PGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLP 146 (385)
T ss_dssp CCHHHHHHHHHHHHHTTCCCCCGGGEEEESHHHHHHHHHHHHHCC--TTCEEEEEESCCTHHHHHHHHTTCEEEEEECCG
T ss_pred CCHHHHHHHHHHHHHHhCCCCChHHEEEcCChHHHHHHHHHHhcC--CCCEEEEcCCCchhHHHHHHHcCCEEEEeecCc
Confidence 457999999999999888764445799999999999999988765 899999999999999999999999999999974
Q ss_pred --CCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCcccccccccccCC
Q 011842 216 --SGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAP 290 (476)
Q Consensus 216 --~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~ 290 (476)
++.+|+++|++++.+++ .+|++++++|+||.+.+ +++|+++|++||+ ++++|++|+.+.+.. ...+
T Consensus 147 ~~~~~~d~~~l~~~l~~~~---~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~-----~li~De~~~~~~~~~-~~~~ 217 (385)
T 1b5p_A 147 EEGFVPDPERVRRAITPRT---KALVVNSPNNPTGAVYPKEVLEALARLAVEHDF-----YLVSDEIYEHLLYEG-EHFS 217 (385)
T ss_dssp GGTTCCCHHHHHTTCCTTE---EEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTC-----EEEEECTTTTCBSSS-CCCC
T ss_pred ccCCCCCHHHHHHhcCCCC---EEEEEeCCCCCCCCCcCHHHHHHHHHHHHHcCC-----EEEEEccchhcccCC-CCCC
Confidence 45799999999886543 47788899999999855 9999999999999 999999998765532 2111
Q ss_pred CCCCcccccEEEEcCCCCCC-CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHh-----Chh
Q 011842 291 KVSFKKPIGSVSVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRK-----GYK 364 (476)
Q Consensus 291 ~~~~~~~~Dsi~~s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~-----g~~ 364 (476)
..+.....+++..+++|+++ .++++|++++++++++.+.....+. ..+ ...+.++++...+ +.+
T Consensus 218 ~~~~~~~~~i~~~s~SK~~~~~G~RiG~~~~~~~~~~~l~~~~~~~-------~~~---~~~~~~~a~~~~l~~~~~~~~ 287 (385)
T 1b5p_A 218 PGRVAPEHTLTVNGAAKAFAMTGWRIGYACGPKEVIKAMASVSRQS-------TTS---PDTIAQWATLEALTNQEASRA 287 (385)
T ss_dssp GGGTCTTTEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHHHHHTT-------TCS---CCHHHHHHHHHHHHCHHHHHH
T ss_pred HHHcCCCCEEEEEechhhcCCcccceEEEEeCHHHHHHHHHHHhhc-------cCC---CCHHHHHHHHHHHhCCCcchH
Confidence 11111134677889999986 5678999999887766553211111 001 1234444444433 234
Q ss_pred cHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecC----CcHHHhh-----ceeeccc-----CCEEEEEEcCC
Q 011842 365 GFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERP----QDEEFVR-----RWQLACQ-----GNIAHVVVMPN 430 (476)
Q Consensus 365 g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~----~~~~~~~-----~~~l~~~-----~~~lRv~~~~~ 430 (476)
.+++..++..++++++.+.|++.|+....++....+.+..+ +..++.+ ++.+... .+.+|+++.
T Consensus 288 ~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gv~v~~g~~f~~~~~iRis~~-- 365 (385)
T 1b5p_A 288 FVEMAREAYRRRRDLLLEGLTALGLKAVRPSGAFYVLMDTSPIAPDEVRAAERLLEAGVAVVPGTDFAAFGHVRLSYA-- 365 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCBCCCSBTTEEEEECTTTCSSHHHHHHHHHHTTEECEESGGGTCTTEEEEECC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCeecCCCeeEEEEEecCCCCCCHHHHHHHHHHCCeEEecccccCCCCeEEEEec--
Confidence 46677788888999999999988764433333334444443 2233322 3333211 368999876
Q ss_pred CCHHHHHHHHHHHHHHH
Q 011842 431 VTIDKLDDFLNELIENR 447 (476)
Q Consensus 431 ~T~edid~~~~~l~~~~ 447 (476)
+++++|+..++.|.++.
T Consensus 366 ~~~~~i~~~l~~l~~~l 382 (385)
T 1b5p_A 366 TSEENLRKALERFARVL 382 (385)
T ss_dssp SCHHHHHHHHHHGGGGC
T ss_pred CCHHHHHHHHHHHHHHH
Confidence 78999999999887654
No 60
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=99.94 E-value=1.5e-24 Score=225.32 Aligned_cols=333 Identities=11% Similarity=0.037 Sum_probs=226.9
Q ss_pred ccCCCCcCCcchHHHHHHHHHhhCCCCCCcccCccchhhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHH
Q 011842 99 HLGYPYNLDFDYGALAQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVG 178 (476)
Q Consensus 99 ~~g~p~~~~~~~~~l~~~l~~~~n~~g~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa 178 (476)
..|.|....++...+.+.+...+...+.....+....+..++++++.+++.+..|.+ +..++++|+|+++|+..++.++
T Consensus 82 ~~g~p~~~~~p~~~v~~a~~~~l~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~-~~~~v~~t~G~~~al~~~~~~l 160 (448)
T 3aow_A 82 AGGLPNPKTFPKEIIRDILVEIMEKYADKALQYGTTKGFTPLRETLMKWLGKRYGIS-QDNDIMITSGSQQALDLIGRVF 160 (448)
T ss_dssp CCCCCCGGGSCHHHHHHHHHHHHHHSHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCC-TTSEEEEESSHHHHHHHHHHHH
T ss_pred CCCCCCchhCCHHHHHHHHHHHHHhhhHHHhCCCCCCCcHHHHHHHHHHHHHhcCcC-ChhhEEEeCcHHHHHHHHHHHH
Confidence 347777655555555544443332211001111112245789999999998888985 3446999999999999999888
Q ss_pred HhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccCHHHHHHHHH----cCCCCcEEE-EEeeCCCccccccC-
Q 011842 179 REVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCADFKAKLL----QNKDKPAII-NVNIGTTVKGAVDD- 252 (476)
Q Consensus 179 ~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~~~Le~~l~----~~~~~p~~v-v~t~gtt~tG~id~- 252 (476)
.+ ||+.|++.+++|.++...++..|++++.+|++++| +|+++|+++|+ +. .++.+| +++++.|++|.+.+
T Consensus 161 ~~--~Gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~g-~d~~~L~~~l~~~~~~~-~~~k~v~~~~~~~NPtG~~~~~ 236 (448)
T 3aow_A 161 LN--PGDIVVVEAPTYLAALQAFNFYEPQYIQIPLDDEG-MKVEILEEKLKELKSQG-KKVKVVYTVPTFQNPAGVTMNE 236 (448)
T ss_dssp CC--TTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETTE-ECHHHHHHHHHHHHHTT-CCEEEEEECCSSCTTTCCCCCH
T ss_pred cC--CCCEEEEeCCChHHHHHHHHHcCCEEEEeccCCCC-CCHHHHHHHHhhhhccC-CCCeEEEECCCCCCCcCCCCCH
Confidence 65 89999999999999999999999999999997665 99999999997 42 234455 56788999999866
Q ss_pred --HHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCcc-cccEEEEcCCCCCCCCCCceeEEeehhhhhhhc
Q 011842 253 --LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLS 329 (476)
Q Consensus 253 --l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~ 329 (476)
+++|+++|++||+ +|++|++|+.+.+......+...+.. ..+++..+++|+++.++++|++++++++++.+.
T Consensus 237 ~~l~~i~~la~~~~~-----~lI~De~y~~~~~~g~~~~~~~~~~~~~~vi~~~S~SK~~~~GlriG~v~~~~~l~~~l~ 311 (448)
T 3aow_A 237 DRRKYLLELASEYDF-----IVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSKILAPGFRIGWMVGDPGIIRKME 311 (448)
T ss_dssp HHHHHHHHHHHHHTC-----EEEEECSCTTCBCSSCCCCCTGGGCTTSCEEEEEESTTTTCGGGCCEEEEECHHHHHHHH
T ss_pred HHHHHHHHHHHHcCC-----EEEEECCCccccCCCCCCcCHHhcCCCCCEEEEccchhhccccccEEEEEeCHHHHHHHH
Confidence 6799999999999 99999999876653221111112211 246778889999997788999999988766553
Q ss_pred CCccccCCCCCcccCCCCChhHHHHHHHHHHhCh----hcHHHHHHHHHHHHHHHHHHHHhc---CCeEeecCCeeEEEE
Q 011842 330 SNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGY----KGFQKEVQKCLRNAHYLKDRLLDA---GISAMLNELSSTVVF 402 (476)
Q Consensus 330 ~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~----~g~~~~~~~~~~~a~~l~~~L~~~---g~~~~~~~~~~iv~f 402 (476)
....+. ..+.+ .+.++++...+.. +.+++..+++.++++++.+.|++. ++....+...+++.+
T Consensus 312 ~~~~~~-------~~~~~---~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~g~~~~~p~~g~~~~v 381 (448)
T 3aow_A 312 IAKQST-------DLCTN---VFGQVVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLEALEEFMPEGVKWTKPEGGMFIWV 381 (448)
T ss_dssp HHHHHH-------HSSCC---HHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEECCCSBSSEEEE
T ss_pred HHHHHh-------cCCCC---HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEeCCCccEEEEE
Confidence 221111 11111 3444444444322 235666677778999999999874 454333444566667
Q ss_pred ecCC---cHHHh-----hceeec----c-----cCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHh
Q 011842 403 ERPQ---DEEFV-----RRWQLA----C-----QGNIAHVVVMPNVTIDKLDDFLNELIENRSTWYE 452 (476)
Q Consensus 403 ~~~~---~~~~~-----~~~~l~----~-----~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~~ 452 (476)
..+. ..++. ++..+. . ..+.+|+++.. .|+++|+.+++.|.++.++..+
T Consensus 382 ~~~~~~~~~~l~~~l~~~gV~v~pg~~f~~~~~~~~~iRls~~~-~~~e~i~~~~~~L~~~l~~~~~ 447 (448)
T 3aow_A 382 TLPDGIDSKKMLERAIKKGVAYVPGEAFYAHRDVKNTMRLNFTY-VDEDKIMEGIKRLAETIKEELK 447 (448)
T ss_dssp ECSTTCCHHHHHHHHHHTTEECEEGGGGSTTCCCCSEEEEECSS-SCTHHHHHHHHHHHHHHHHHHC
T ss_pred EcCCCCCHHHHHHHHHHCCcEEEcchhhcCCCCCCCEEEEEeCC-CCHHHHHHHHHHHHHHHHHHHh
Confidence 7653 22332 233321 1 24689999875 4899999999999999887654
No 61
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=99.94 E-value=9.4e-24 Score=213.27 Aligned_cols=282 Identities=13% Similarity=-0.009 Sum_probs=211.7
Q ss_pred HHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCC
Q 011842 138 RQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISG 217 (476)
Q Consensus 138 ~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g 217 (476)
.++++++.+++.+.+|++.+...+++|+|+++++..++.++.. +++.|++++++|.++...++..|++++.+|.++++
T Consensus 72 ~~l~~~la~~l~~~~g~~~~~~~v~~~~G~~~al~~~~~~l~~--~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~~~ 149 (369)
T 3cq5_A 72 VELRDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAFGG--PGRTALGFQPSYSMHPILAKGTHTEFIAVSRGADF 149 (369)
T ss_dssp HHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCS--TTCEEEEEESSCTHHHHHHHHTTCEEEEEECCTTS
T ss_pred HHHHHHHHHhhhhcccCCCChHhEEECCChHHHHHHHHHHhcC--CCCEEEEcCCChHHHHHHHHHcCCEEEEecCCcCC
Confidence 4899999999998877764445699999999999988888754 88999999999999999999999999999988777
Q ss_pred ccCHHHHHHHHHc-CCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCcc
Q 011842 218 EIDCADFKAKLLQ-NKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKK 296 (476)
Q Consensus 218 ~~D~~~Le~~l~~-~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~ 296 (476)
.+|+++|++++.+ +++ +|+++++++++|.+.|++++.++++.+++ ++++|++|+.+... .......+. .
T Consensus 150 ~~d~~~l~~~i~~~~~~---~v~~~~~~nptG~~~~~~~l~~l~~~~~~-----~li~De~~~~~~~~-~~~~~~~~~-~ 219 (369)
T 3cq5_A 150 RIDMDVALEEIRAKQPD---IVFVTTPNNPTGDVTSLDDVERIINVAPG-----IVIVDEAYAEFSPS-PSATTLLEK-Y 219 (369)
T ss_dssp SCCHHHHHHHHHHHCCS---EEEEESSCTTTCCCCCHHHHHHHHHHCSS-----EEEEECTTGGGCCS-CCGGGGTTT-C
T ss_pred CCCHHHHHHHhhccCCC---EEEEeCCCCCCCCCCCHHHHHHHHHhCCC-----EEEEECCchhhcCC-cchHHHHhh-C
Confidence 8999999999987 554 77778999999999999999999999999 99999999876532 110000111 1
Q ss_pred c-ccEEEEcCCCCCC-CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhC-hhcHHHHHHHH
Q 011842 297 P-IGSVSVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKG-YKGFQKEVQKC 373 (476)
Q Consensus 297 ~-~Dsi~~s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g-~~g~~~~~~~~ 373 (476)
. .++++.++||+++ .++++|++++++++++.+.....+ + +. ..+.++++...+. .+.+++..++.
T Consensus 220 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~-------~--~~---~~~~~~a~~~~l~~~~~~~~~~~~~ 287 (369)
T 3cq5_A 220 PTKLVVSRTMSKAFDFAGGRLGYFVANPAFIDAVMLVRLP-------Y--HL---SALSQAAAIVALRHSADTLGTVEKL 287 (369)
T ss_dssp TTTEEEEEESSSTTSCGGGCCEEEEECTHHHHHHHTTSCT-------T--CS---CHHHHHHHHHHHHTHHHHHTHHHHH
T ss_pred CCCEEEEEechHhcCCcccceEEEEeCHHHHHHHHHcCCC-------C--CC---CHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 2 4588899999997 567899999998876665432211 1 11 2344444444442 23467778888
Q ss_pred HHHHHHHHHHHHhcCCeEeecCCeeEEEEecC-CcHHHh-----hceeeccc--CCEEEEEEcCCCCHHHHHHHHHHHHH
Q 011842 374 LRNAHYLKDRLLDAGISAMLNELSSTVVFERP-QDEEFV-----RRWQLACQ--GNIAHVVVMPNVTIDKLDDFLNELIE 445 (476)
Q Consensus 374 ~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~-~~~~~~-----~~~~l~~~--~~~lRv~~~~~~T~edid~~~~~l~~ 445 (476)
.++++++.+.|++.|+... ++..+++.+..+ +..++. +++.+... .+.+|+++. |++|+++++++|++
T Consensus 288 ~~~~~~l~~~L~~~g~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~~iRis~~---~~~~i~~~~~~l~~ 363 (369)
T 3cq5_A 288 SVERVRVAARLEELGYAVV-PSESNFVFFGDFSDQHAAWQAFLDRGVLIRDVGIAGHLRTTIG---VPEENDAFLDAAAE 363 (369)
T ss_dssp HHHHHHHHHHHHHHTCEEE-CCSSSEEEEECCSSHHHHHHHHHHTTEECBCCSCTTEEEEECC---CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCEEC-CCCCeEEEEECCCCHHHHHHHHHHCCEEEEECCCCCeEEEEeC---CHHHHHHHHHHHHH
Confidence 8999999999998876544 555667777765 333332 23333322 468999886 89999999999988
Q ss_pred HH
Q 011842 446 NR 447 (476)
Q Consensus 446 ~~ 447 (476)
+.
T Consensus 364 ~~ 365 (369)
T 3cq5_A 364 II 365 (369)
T ss_dssp HH
T ss_pred HH
Confidence 75
No 62
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=99.94 E-value=1.6e-24 Score=218.79 Aligned_cols=282 Identities=14% Similarity=0.049 Sum_probs=207.8
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCC
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLI 215 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~ 215 (476)
+..++++++.+++.+..|.+.+...+++|+||++|+..++.++.. |++.|++++++|.++...++..|++++.+|
T Consensus 67 ~~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~--~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~--- 141 (370)
T 2z61_A 67 GILELREKISELYKDKYKADIIPDNIIITGGSSLGLFFALSSIID--DGDEVLIQNPCYPCYKNFIRFLGAKPVFCD--- 141 (370)
T ss_dssp CCHHHHHHHHHHHHHHSSCCCCGGGEEEESSHHHHHHHHHHHHCC--TTCEEEEESSCCTHHHHHHHHTTCEEEEEC---
T ss_pred CCHHHHHHHHHHHHHHhCCCCChhhEEECCChHHHHHHHHHHhcC--CCCEEEEeCCCchhHHHHHHHcCCEEEEeC---
Confidence 356999999999999888765556799999999999999988855 889999999999999999999999999888
Q ss_pred CCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCC-
Q 011842 216 SGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSF- 294 (476)
Q Consensus 216 ~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~- 294 (476)
+|+++|++++.++ +.+|+++++++++|.+.|++ |.++|++||+ ++++|++|+.+.+.. ...+...+
T Consensus 142 ---~d~~~l~~~l~~~---~~~v~~~~p~nptG~~~~~~-l~~~~~~~~~-----~li~De~~~~~~~~g-~~~~~~~~~ 208 (370)
T 2z61_A 142 ---FTVESLEEALSDK---TKAIIINSPSNPLGEVIDRE-IYEFAYENIP-----YIISDEIYNGLVYEG-KCYSAIEFD 208 (370)
T ss_dssp ---SSHHHHHHHCCSS---EEEEEEESSCTTTCCCCCHH-HHHHHHHHCS-----EEEEECTTTTCBSSS-CCCCGGGTC
T ss_pred ---CCHHHHHHhcccC---ceEEEEcCCCCCcCcccCHH-HHHHHHHcCC-----EEEEEcchhhcccCC-CCcCHHHcc
Confidence 6999999998653 34777889999999999999 9999999999 999999998765532 11111222
Q ss_pred -cccccEEEEcCCCCCC-CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhC---hhcHHHH
Q 011842 295 -KKPIGSVSVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKG---YKGFQKE 369 (476)
Q Consensus 295 -~~~~Dsi~~s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g---~~g~~~~ 369 (476)
....|+++.++||+++ .++++|++++++++++.+....... .++. ..+.++++...+. .+.+++.
T Consensus 209 ~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~-------~~~~---~~~~~~a~~~~l~~~~~~~~~~~ 278 (370)
T 2z61_A 209 ENLEKTILINGFSKLYAMTGWRIGYVISNDEIIEAILKLQQNL-------FISA---PTISQYAALKAFEKETEREINSM 278 (370)
T ss_dssp TTCSSEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHHHHHHH-------TSSS---CHHHHHHHGGGGSHHHHHHHHHH
T ss_pred CCCCcEEEEecChhccCCccceEEEEEECHHHHHHHHHHHhhc-------ccCC---CHHHHHHHHHHHhccCHHHHHHH
Confidence 1237899999999996 5677999999988766553211111 1111 2344445444442 3456777
Q ss_pred HHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecC-CcHHHh------hceeecc-------cCCEEEEEEcCCCCHHH
Q 011842 370 VQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERP-QDEEFV------RRWQLAC-------QGNIAHVVVMPNVTIDK 435 (476)
Q Consensus 370 ~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~-~~~~~~------~~~~l~~-------~~~~lRv~~~~~~T~ed 435 (476)
.++..++++++.+.|++.|+....++...++.+..+ +..++. +++.+.. ..+.+|+++. +|+++
T Consensus 279 ~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~Ri~~~--~~~~~ 356 (370)
T 2z61_A 279 IKEFDRRRRLVLKYVKDFGWEVNNPIGAYYVFPNIGEDGREFAYKLLKEKFVALTPGIGFGSKGKNYIRISYA--NSYEN 356 (370)
T ss_dssp HHHHHHHHHHHHHHHHHTTCBCCCCCBTTEECCBCSSCHHHHHHHHHHHHCEECEEGGGGCGGGSSBEEEECC--SCHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCeecCCCcceEEEEecCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEe--CCHHH
Confidence 888899999999999988764433333333444554 332222 2333321 2468999888 79999
Q ss_pred HHHHHHHHHHHH
Q 011842 436 LDDFLNELIENR 447 (476)
Q Consensus 436 id~~~~~l~~~~ 447 (476)
|+.+++.|.++.
T Consensus 357 i~~~~~~l~~~l 368 (370)
T 2z61_A 357 IKEGLERIKEFL 368 (370)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999998765
No 63
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.94 E-value=4.7e-25 Score=227.24 Aligned_cols=299 Identities=12% Similarity=0.028 Sum_probs=212.5
Q ss_pred hhHHHHHHHHHHHHHHcCCC-CCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCC
Q 011842 136 HSRQFEVGVLDWFARLWELE-NNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCL 214 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~-~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~ 214 (476)
+..++++++.+++.+.+|++ .+...+++|+|+++|+..++.+... |++.|+++.++|.++...++..|++++.+|++
T Consensus 86 g~~~lr~~la~~l~~~~g~~~~~~~~v~~t~G~~~al~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~ 163 (425)
T 1vp4_A 86 GDPVLKQQILKLLERMYGITGLDEDNLIFTVGSQQALDLIGKLFLD--DESYCVLDDPAYLGAINAFRQYLANFVVVPLE 163 (425)
T ss_dssp CCHHHHHHHHHHHHHHHCCCSCCGGGEEEEEHHHHHHHHHHHHHCC--TTCEEEEEESCCHHHHHHHHTTTCEEEEEEEE
T ss_pred CCHHHHHHHHHHHHhccCCCCCCcccEEEeccHHHHHHHHHHHhCC--CCCEEEEeCCCcHHHHHHHHHcCCEEEEeccC
Confidence 34689999999998877854 3345699999999999999888765 88999999999999999999999999999987
Q ss_pred CCCccCHHHHHHHHHcC-----CCCcEEE-EEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCcccccccc
Q 011842 215 ISGEIDCADFKAKLLQN-----KDKPAII-NVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPF 285 (476)
Q Consensus 215 ~~g~~D~~~Le~~l~~~-----~~~p~~v-v~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~ 285 (476)
+++ +|+++|+++|++. ..++.+| +++++.|++|.+.| +++|+++|++||+ ++++|++|+.+.+..
T Consensus 164 ~~~-~d~~~l~~~l~~~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~-----~li~De~~~~~~~~g 237 (425)
T 1vp4_A 164 DDG-MDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDL-----FIVEDDPYGALRYEG 237 (425)
T ss_dssp TTE-ECHHHHHHHHHHHHHTTCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTC-----EEEEECSSTTCBCSS
T ss_pred CCC-CCHHHHHHHHHhhhhcccCCCceEEEECCCCCCCCCCcCCHHHHHHHHHHHHHcCC-----EEEEECCCccccCCC
Confidence 665 9999999999761 1123465 56788999999865 6789999999999 999999998765432
Q ss_pred cccCCCCCCc-ccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhC--
Q 011842 286 VKKAPKVSFK-KPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKG-- 362 (476)
Q Consensus 286 ~~~~~~~~~~-~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g-- 362 (476)
....+...+. ...+++..+++|+++.++++|++++++++++.+....... ..+.+ .+.++++...+.
T Consensus 238 ~~~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~~~~~~~l~~~~~~~-------~~~~~---~~~~~a~~~~l~~~ 307 (425)
T 1vp4_A 238 ETVDPIFKIGGPERVVLLNTFSKVLAPGLRIGMVAGSKEFIRKIVQAKQSA-------DLCSP---AITHRLAARYLERY 307 (425)
T ss_dssp CCCCCHHHHHCTTTEEEEEESTTTTCGGGCEEEEECCHHHHHHHHHHHHHH-------HSSCC---HHHHHHHHHHHHHS
T ss_pred CCCcCHHHhCCCCCEEEEeccccccccccceEEEeeCHHHHHHHHHHhhhh-------cCCCC---HHHHHHHHHHHhcC
Confidence 1111101111 1246778899999997778999999987766553211110 11111 344444444442
Q ss_pred --hhcHHHHHHHHHHHHHHHHHHHHhc-----CCeEeecCCeeEEEEecCC---cHHH-----hhceeec----c-----
Q 011842 363 --YKGFQKEVQKCLRNAHYLKDRLLDA-----GISAMLNELSSTVVFERPQ---DEEF-----VRRWQLA----C----- 418 (476)
Q Consensus 363 --~~g~~~~~~~~~~~a~~l~~~L~~~-----g~~~~~~~~~~iv~f~~~~---~~~~-----~~~~~l~----~----- 418 (476)
.+.+++..++..++++++.+.|++. ++....+..++++.+..+. ..++ .+++.+. .
T Consensus 308 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~f~~~~~ 387 (425)
T 1vp4_A 308 DLLEQLKPTIELYRRKRTVMLNALEEYFSDIPGVKWVKSEGGLFIWLTLPEGFDTWEMFEYAKRKKVFYVPGRVFKVYDE 387 (425)
T ss_dssp CHHHHTHHHHHHHHHHHHHHHHHHHHHSTTSTTCEECCCSBSSEEEEECCTTCCTTTTHHHHHHHTEECEEGGGGCTTCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCCccEEEEEEcCCCCCHHHHHHHHHHCCCEEECchhhcCCCC
Confidence 2345667777888999999999885 4543334445677777652 2222 1233332 1
Q ss_pred cCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhc
Q 011842 419 QGNIAHVVVMPNVTIDKLDDFLNELIENRSTWYED 453 (476)
Q Consensus 419 ~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~~~ 453 (476)
..+.+|+++... |+++|+++++.|+++.+++.++
T Consensus 388 ~~~~iRis~~~~-~~e~i~~~l~~l~~~l~~~~~~ 421 (425)
T 1vp4_A 388 PSPSMRLSFCLP-PDEKIVEGIKRLREVVLEYGKE 421 (425)
T ss_dssp CCSEEEEECSSS-CHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEeCCC-CHHHHHHHHHHHHHHHHHHHhh
Confidence 246899998763 9999999999999998877654
No 64
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.94 E-value=8.3e-25 Score=218.92 Aligned_cols=293 Identities=15% Similarity=0.100 Sum_probs=205.4
Q ss_pred hHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHH--HHHHcCCeEEEEeCC
Q 011842 137 SRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFK--AARMYRMECVKVDCL 214 (476)
Q Consensus 137 ~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~--~~~~~G~~v~~v~~~ 214 (476)
..++++++++++++++|.+++ .+++|+|||+|+..++.+++. +++.|++++++|.++.. .++..|++++.+|.+
T Consensus 47 ~~~~~~~~~~~l~~~~g~~~~--~v~~~~g~t~a~~~~~~~~~~--~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 122 (359)
T 1svv_A 47 QDSHCAKAARLIGELLERPDA--DVHFISGGTQTNLIACSLALR--PWEAVIATQLGHISTHETGAIEATGHKVVTAPCP 122 (359)
T ss_dssp CSHHHHHHHHHHHHHHTCTTS--EEEEESCHHHHHHHHHHHHCC--TTEEEEEETTSHHHHSSTTHHHHTTCCEEEECCT
T ss_pred ccHHHHHHHHHHHHHhCCCCc--cEEEeCCchHHHHHHHHHHhC--CCCEEEEcccchHHHHHHHHHhcCCCeeEEEeCC
Confidence 348889999999999997653 499999999999999998865 89999999999999987 478889999999986
Q ss_pred CCCccCHHHHHHHHHcCC----CCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCcccccccccc
Q 011842 215 ISGEIDCADFKAKLLQNK----DKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVK 287 (476)
Q Consensus 215 ~~g~~D~~~Le~~l~~~~----~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~ 287 (476)
++.+|+++|+++++++. .++.+|+++++ |++|.+.| +++|.++|++||+ |+|+|++|.++......
T Consensus 123 -~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~-~ptG~~~~~~~l~~i~~~~~~~~~-----~li~De~~~~~~~~~~~ 195 (359)
T 1svv_A 123 -DGKLRVADIESALHENRSEHMVIPKLVYISNT-TEVGTQYTKQELEDISASCKEHGL-----YLFLDGARLASALSSPV 195 (359)
T ss_dssp -TSCCCHHHHHHHHHHSCSTTSCEEEEEEEESS-CTTSCCCCHHHHHHHHHHHHHHTC-----EEEEECTTHHHHHTSTT
T ss_pred -CCeecHHHHHHHHHHHHhccCCCceEEEEEcC-CCCceecCHHHHHHHHHHHHHhCC-----EEEEEccchhhhhcCCC
Confidence 78899999999998751 13457778777 68999988 9999999999999 99999999443211111
Q ss_pred cCCC-CCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcH
Q 011842 288 KAPK-VSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGF 366 (476)
Q Consensus 288 ~~~~-~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~ 366 (476)
.... +.....+|++++++||+++ |.++|++++++++++.+...... . ..... . +.....++ ...+...++
T Consensus 196 ~~~~~~~~~~~~d~~~~s~~K~g~-~~~~g~l~~~~~~~~~~~~~~~~-~--~~~~~--~-~~~~~~~~--~~~l~~~~~ 266 (359)
T 1svv_A 196 NDLTLADIARLTDMFYIGATKAGG-MFGEALIILNDALKPNARHLIKQ-R--GALMA--K-GWLLGIQF--EVLMKDNLF 266 (359)
T ss_dssp CCCCHHHHHHHCSEEEEECTTTTC-SSCEEEEECSGGGCTTHHHHHHH-T--TCCCT--T-THHHHHHH--HHHTSTTHH
T ss_pred cchhhhhhhhcCCEEEEecccCCC-CCceEEEEEcccHHHHHHHHHhc-C--Ccccc--c-chhhHHHH--HHHHhhhhH
Confidence 0000 0001237999999999854 78899999988765544211000 0 00001 0 11112222 233444567
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecCCc--HHHhh--ceeec----ccCCEEEEEEcCCCCHHHHHH
Q 011842 367 QKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERPQD--EEFVR--RWQLA----CQGNIAHVVVMPNVTIDKLDD 438 (476)
Q Consensus 367 ~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~~--~~~~~--~~~l~----~~~~~lRv~~~~~~T~edid~ 438 (476)
++..++..++++++.+.|+..++....++.++++++..+.. ..+.+ ++.+. ...+.+|++++..+|+++|++
T Consensus 267 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~~~~~~~~~iRi~~~~~~~~~~i~~ 346 (359)
T 1svv_A 267 FELGAHSNKMAAILKAGLEACGIRLAWPSASNQLFPILENTMIAELNNDFDMYTVEPLKDGTCIMRLCTSWATEEKECHR 346 (359)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCBSSCCSSSEECBEEEHHHHHHHTTTEECEEEEEETTTEEEEEEECCTTCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccCCeEEccCCccceEEEEcCHHHHHHHHHhcCEEEEecccCCCceEEEEccCcCCHHHHHH
Confidence 88889999999999999954565444345556655554321 11222 23221 134689999888999999999
Q ss_pred HHHHHHHHHHH
Q 011842 439 FLNELIENRST 449 (476)
Q Consensus 439 ~~~~l~~~~~~ 449 (476)
++++|+++.++
T Consensus 347 ~~~~l~~~~~~ 357 (359)
T 1svv_A 347 FVEVLKRLVAS 357 (359)
T ss_dssp HHHHHHHC---
T ss_pred HHHHHHHHHhc
Confidence 99999887654
No 65
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.93 E-value=3.5e-25 Score=223.23 Aligned_cols=316 Identities=12% Similarity=0.014 Sum_probs=220.6
Q ss_pred CCcCCcchHHHHHHHHHhhC---CCCCCcccCccchhhHHHHHHHHHHHHHHcCCCCCcccEEE-cCCchhHHHHHHHHH
Q 011842 103 PYNLDFDYGALAQLQHFSIN---NLGDPFIESNYGVHSRQFEVGVLDWFARLWELENNEYWGYI-TNCGTEGNLHGILVG 178 (476)
Q Consensus 103 p~~~~~~~~~l~~~l~~~~n---~~g~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~g~~-t~ggt~An~~al~aa 178 (476)
|.....+...+..+.....+ |..+.+..++.+....++.+++++.+++++|.++ ++.++| |+|||+|+..++...
T Consensus 11 pgpt~~~~~V~~a~~~~~~~~~~~~~s~~~~~hr~~~~~~~~~~~r~~la~ll~~~~-~~~v~f~t~~~T~a~n~~~~~~ 89 (361)
T 3m5u_A 11 AGPSTLPLEILEQAQKELCDYQGRGYSIMEISHRTKVFEEVHFGAQEKAKKLYELND-DYEVLFLQGGASLQFAMIPMNL 89 (361)
T ss_dssp SSSCCCCHHHHHHHHHTSSSGGGSSSCGGGSCSSSHHHHHHHHHHHHHHHHHHTCCT-TEEEEEESSHHHHHHHHHHHHH
T ss_pred CCCCCCcHHHHHHHHHHHHhcccCCceeeccCCCCHHHHHHHHHHHHHHHHHhCCCC-CceEEEEcCcHHHHHHHHHHhc
Confidence 44333344555555544432 2222222233344567888899999999999974 345887 999999999888776
Q ss_pred HhhCCCc---EEEecCCCchHHHHHHHHcCCeEEEEeCCCCCc--cCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCH
Q 011842 179 REVFPDG---ILYASRESHYSVFKAARMYRMECVKVDCLISGE--IDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDL 253 (476)
Q Consensus 179 ~~~~p~~---~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~--~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l 253 (476)
. +++ .|+++..+|. +...++..|+++..++.++++. ++++. + |.++++ +|.+++.+|.+|.+.|.
T Consensus 90 ~---~~~~~~~i~~~~~~~~-~~~~a~~~G~~v~~~~~~~~g~~~~~~~~-~--l~~~t~---lv~~~~~e~~tG~~~~~ 159 (361)
T 3m5u_A 90 A---LNGVCEYANTGVWTKK-AIKEAQILGVNVKTVASSEESNFDHIPRV-E--FSDNAD---YAYICSNNTIYGTQYQN 159 (361)
T ss_dssp C---CSSCEEEEECSHHHHH-HHHHHHHTTCCEEEEEECTTTTSCSCCCC-C--CCTTSS---EEEEESEETTTTEECSS
T ss_pred C---CCCeEEEEeCCHHHHH-HHHHHHHcCCceEEEecccCcCCCcCChh-h--cCCCCC---EEEEeCCCCCcceeCCc
Confidence 5 444 3555555554 3445566799999999987774 56766 3 766665 78888999999998552
Q ss_pred HHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcC--C
Q 011842 254 DLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSS--N 331 (476)
Q Consensus 254 ~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~--~ 331 (476)
+++ +|+ ++|||++++.+..| +++.+ +|++++++|||++ |.|+|++++++++++.+.. .
T Consensus 160 -----i~~-~~~-----~~~vD~~q~~g~~~-------id~~~-~d~~~~s~~K~~g-p~G~g~l~~~~~~~~~~~~~~~ 219 (361)
T 3m5u_A 160 -----YPK-TKT-----PLIVDASSDFFSRK-------VDFSN-IALFYGGVQKNAG-ISGLSCIFIRKDMLERSKNKQI 219 (361)
T ss_dssp -----CCC-CSS-----CEEEECGGGTTSSC-------CCCTT-EEEEEEETTTTSS-CTTCEEEEEEHHHHHHHHTCCC
T ss_pred -----ccc-cCC-----EEEEEcccccCCCC-------CCccc-CCEEEEechhccC-CCccEEEEEcHHHHhhhcCCCC
Confidence 333 488 99999999988777 55543 7999999999997 9999999999987655532 2
Q ss_pred ccccCC----CCCcccCCCCChhHHHHHHHHHHhChh-cHHHHHHHHHHHHHHHHHHHHhcC-CeEe-ecCC---eeEEE
Q 011842 332 VEYLAS----RDATIMGSRNGHAPIFLWYTLNRKGYK-GFQKEVQKCLRNAHYLKDRLLDAG-ISAM-LNEL---SSTVV 401 (476)
Q Consensus 332 ~~yl~~----~~~~~~~sr~~~~~l~~~~~l~~~g~~-g~~~~~~~~~~~a~~l~~~L~~~g-~~~~-~~~~---~~iv~ 401 (476)
+.|+.. ......+|.+....+.+..+++.+... |++++.++..+++++|++.|++.+ +... .++. ..+++
T Consensus 220 p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivs 299 (361)
T 3m5u_A 220 PSMLNYLTHAENQSLFNTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKATMLYECIDLSNGFYKGHADKKDRSLMNVS 299 (361)
T ss_dssp CGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHTSTTSEEESSCGGGBCSSEEE
T ss_pred CceeehHHHhhcCCCCCCccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCeeeccCCHHHcCCeEEE
Confidence 333321 112223566656667778888888777 899999999999999999999987 4233 2221 35788
Q ss_pred EecCC----cHHHhh-----ceeeccc---CCEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Q 011842 402 FERPQ----DEEFVR-----RWQLACQ---GNIAHVVVMPNVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 402 f~~~~----~~~~~~-----~~~l~~~---~~~lRv~~~~~~T~edid~~~~~l~~~~~~ 449 (476)
|..++ +..+.. ++.+... .+.+|++++.++|.+|||+|+++|+++.++
T Consensus 300 f~~~~~~~~~~~~~~~L~~~gI~~~~g~~~~g~iRiS~~~~~t~edId~l~~al~~~~~~ 359 (361)
T 3m5u_A 300 FNIAKNKDLEPLFVKEAEEAGMIGLKGHRILGGIRASIYNALNLDQVKTLCEFMKEFQGK 359 (361)
T ss_dssp EEESSCTTHHHHHHHHHHHTTEECCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred EECCCchhhhHHHHHHHHHCCCEEecCCCccCeEEEEccCCCCHHHHHHHHHHHHHHHHh
Confidence 88764 122322 2222211 146999999999999999999999998764
No 66
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.93 E-value=4.3e-25 Score=224.62 Aligned_cols=287 Identities=10% Similarity=0.058 Sum_probs=207.3
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCc
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGE 218 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~ 218 (476)
+...++++++++++|.+. .+++++||+|+..++.+... |++.|+++.++|.++..+++..|++++.+|.
T Consensus 88 ~~~~~l~~~la~~~~~~~----~i~~~sGt~a~~~~l~~~~~--~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~----- 156 (399)
T 3tqx_A 88 TIHKELEKDISEFLGTDD----TILYSSCFDANGGLFETLLG--PEDAIISDELNHASIIDGIRLCKAQRYRYKN----- 156 (399)
T ss_dssp HHHHHHHHHHHHHHTCSE----EEEESCHHHHHHTTHHHHCC--TTCEEEEETTCCHHHHHHHHSCCSEEEEECT-----
T ss_pred hHHHHHHHHHHHHHCCCc----EEEECchHHHHHHHHHHhcC--CCCEEEECCcccHHHHHHHHHcCCceeEeCC-----
Confidence 666778888889898762 56666779999988877765 8999999999999999999999999999986
Q ss_pred cCHHHHHHHHHcCCC---CcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCccccccccc-cc-CCCCC
Q 011842 219 IDCADFKAKLLQNKD---KPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFV-KK-APKVS 293 (476)
Q Consensus 219 ~D~~~Le~~l~~~~~---~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~-~~-~~~~~ 293 (476)
+|+++|++.+++... ++.+|++++++|++|.+.|+++|.++|++||+ ++|+|++|+.+++... .. .....
T Consensus 157 ~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~-----~li~De~~~~~~~~~~~~~~~~~~~ 231 (399)
T 3tqx_A 157 NAMGDLEAKLKEADEKGARFKLIATDGVFSMDGIIADLKSICDLADKYNA-----LVMVDDSHAVGFIGENGRGTPEYCG 231 (399)
T ss_dssp TCTTHHHHHHHHHHTTTCSSEEEEEESEETTTTEECCHHHHHHHHHHTTC-----EEEEECTTTTTTSSTTSCCHHHHHT
T ss_pred CCHHHHHHHHHhhhccCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCC-----EEEEECCccccccCCCCCchHHhhC
Confidence 378899999976322 45688888999999999999999999999999 9999999974332211 00 00011
Q ss_pred CcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcC-CccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHHH
Q 011842 294 FKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSS-NVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQK 372 (476)
Q Consensus 294 ~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~-~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~ 372 (476)
.....|+++.++||+++++. .|+++.++++++.+.. ...|.. .++.+.........+++... ++.++..++
T Consensus 232 ~~~~~di~~~s~sK~~~g~~-gG~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~ 303 (399)
T 3tqx_A 232 VADRVDILTGTLGKALGGAS-GGYTSGHKEIIEWLRNRSRPYLF------SNTVAPVIVATSLKVLELLK-TEGPQLRKQ 303 (399)
T ss_dssp CTTCCSEEEEESSSSSCSSC-CEEEEECHHHHHHHHHHCHHHHS------SCCCCHHHHHHHHHHHHHHH-HTHHHHHHH
T ss_pred CCCCCcEEEecchHhcccCc-eEEEEcCHHHHHHHHHhCcceec------cCCCcHHHHHHHHHHHHHHh-hccHHHHHH
Confidence 11246899999999999544 4999999887665533 222321 11222112223333444332 567888999
Q ss_pred HHHHHHHHHHHHHhcCCeEeecCCeeEEEEecCCc---HHHh-----hceeec--------ccCCEEEEEEcCCCCHHHH
Q 011842 373 CLRNAHYLKDRLLDAGISAMLNELSSTVVFERPQD---EEFV-----RRWQLA--------CQGNIAHVVVMPNVTIDKL 436 (476)
Q Consensus 373 ~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~~---~~~~-----~~~~l~--------~~~~~lRv~~~~~~T~edi 436 (476)
..++++++.+.|++.|+... ++..+++.+..+.. .++. +++.+. ...+.+|++++..+|+++|
T Consensus 304 ~~~~~~~l~~~L~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i 382 (399)
T 3tqx_A 304 LQENSRYFRAGMEKLGFQLV-PGNHPIIPVMLGDAQLATNMADHLLQEGIYVVGFSYPVVPMGKARIRVQMSAVHTQQQL 382 (399)
T ss_dssp HHHHHHHHHHHHHHHTCCBC-CCSSSEEEEEEECHHHHHHHHHHHHHTTEECCEECTTTSCTTCEEEEEECCTTCCHHHH
T ss_pred HHHHHHHHHHHHHHcCCCcC-CCCCCEEEEEeCCHHHHHHHHHHHHHCCCEEeeeCCCCCCCCCceEEEEeecCCCHHHH
Confidence 99999999999999887544 55566666665542 2222 233332 1235899999999999999
Q ss_pred HHHHHHHHHHHHHH
Q 011842 437 DDFLNELIENRSTW 450 (476)
Q Consensus 437 d~~~~~l~~~~~~~ 450 (476)
++++++|+++.+++
T Consensus 383 ~~~~~~l~~~~~~~ 396 (399)
T 3tqx_A 383 DRAIEAFGQVGKKL 396 (399)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999987653
No 67
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=99.93 E-value=1.9e-24 Score=219.47 Aligned_cols=290 Identities=12% Similarity=0.027 Sum_probs=210.5
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcc-cEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCC
Q 011842 136 HSRQFEVGVLDWFARLWELENNEY-WGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCL 214 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~-~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~ 214 (476)
+..++++++.+++.+.+|.+.+.. .+++|+|+++|+..++.++.. |++.|++++++|.++...++..|++++.+|++
T Consensus 68 g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~--~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~ 145 (386)
T 1u08_A 68 GVQALREAIAQKTERLYGYQPDADSDITVTAGATEALYAAITALVR--NGDEVICFDPSYDSYAPAIALSGGIVKRMALQ 145 (386)
T ss_dssp CCHHHHHHHHHHHHHHHSCCCCTTTTEEEESSHHHHHHHHHHHHCC--TTCEEEEEESCCTTHHHHHHHTTCEEEEEECC
T ss_pred CCHHHHHHHHHHHHHHhCCCCCCCCCEEEcCChHHHHHHHHHHhCC--CCCEEEEeCCCchhHHHHHHHcCCEEEEeecC
Confidence 457999999999999988764444 699999999999999888754 88999999999999999999999999999997
Q ss_pred C-CCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCcccccccccccCC
Q 011842 215 I-SGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAP 290 (476)
Q Consensus 215 ~-~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~ 290 (476)
+ ++.+|+++|++++.++ +.+|+++++++++|.+.| +++|+++|++||+ |+++|++|+.+.+....+.+
T Consensus 146 ~~~~~~d~~~l~~~l~~~---~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~-----~li~De~~~~~~~~g~~~~~ 217 (386)
T 1u08_A 146 PPHFRVDWQEFAALLSER---TRLVILNTPHNPSATVWQQADFAALWQAIAGHEI-----FVISDEVYEHINFSQQGHAS 217 (386)
T ss_dssp TTTCCCCHHHHHHHCCTT---EEEEEEESSCTTTCCCCCHHHHHHHHHHHTTSCC-----EEEEECTTTTCBCCSSCCCC
T ss_pred cccCcCCHHHHHHhhccc---CEEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCc-----EEEEEccccccccCCCCCcC
Confidence 5 5789999999998543 447778889999999875 7899999999999 99999999876543222222
Q ss_pred CCCCc--ccccEEEEcCCCCCC-CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHH
Q 011842 291 KVSFK--KPIGSVSVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQ 367 (476)
Q Consensus 291 ~~~~~--~~~Dsi~~s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~ 367 (476)
...+. ...|+++.++||+++ .++++|++++++++++.+.....+. ..+.+......+..+++.. .+.++
T Consensus 218 ~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~-------~~~~~~~~~~a~~~~l~~~-~~~~~ 289 (386)
T 1u08_A 218 VLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAPAPISAEIRKVHQYL-------TFSVNTPAQLALADMLRAE-PEHYL 289 (386)
T ss_dssp GGGSHHHHTTEEEEEEHHHHTTCGGGCCEEEECCHHHHHHHHHHHHHH-------TSSCCHHHHHHHHHHHHHC-THHHH
T ss_pred hhcccCccCcEEEEecchhhcCCcccceEEEEcCHHHHHHHHHHHHhh-------ccCCChHHHHHHHHHHhCC-cHHHH
Confidence 12221 237899999999997 5677999999988766553222111 1111112222223333332 45577
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecCC-----cHHH----h--hceeec-c--------cCCEEEEEE
Q 011842 368 KEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERPQ-----DEEF----V--RRWQLA-C--------QGNIAHVVV 427 (476)
Q Consensus 368 ~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~-----~~~~----~--~~~~l~-~--------~~~~lRv~~ 427 (476)
+..++..++++++.+.|++.|+....++...++.+..+. ..++ . +++.+. . ..+.+|+++
T Consensus 290 ~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~iRis~ 369 (386)
T 1u08_A 290 ALPDFYRQKRDILVNALNESRLEILPCEGTYFLLVDYSAVSTLDDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCF 369 (386)
T ss_dssp THHHHHHHHHHHHHHHTTSSSCEECCCCBSSEEEEECTTTCCSCHHHHHHHHHHHSCEECEEGGGGCSSCCCSCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHCCCeecCCCceEEEEEecCCCCCCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCEEEEEE
Confidence 888888999999999999887654434445566666653 2222 2 133332 1 246799888
Q ss_pred cCCCCHHHHHHHHHHHHH
Q 011842 428 MPNVTIDKLDDFLNELIE 445 (476)
Q Consensus 428 ~~~~T~edid~~~~~l~~ 445 (476)
. +++++|+.+++.|++
T Consensus 370 ~--~~~~~i~~~~~~l~~ 385 (386)
T 1u08_A 370 A--KKESTLLAAAERLRQ 385 (386)
T ss_dssp C--SCHHHHHHHHHHHTT
T ss_pred c--CCHHHHHHHHHHHhh
Confidence 6 589999999998853
No 68
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=99.93 E-value=1.3e-24 Score=222.50 Aligned_cols=293 Identities=14% Similarity=0.037 Sum_probs=209.7
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCC
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLI 215 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~ 215 (476)
+..++++++.+++.+..|++.+...+++|+|||+|+..++.++.. |++.|++++++|.++..+++..|++++.+|.++
T Consensus 79 g~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~--~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~ 156 (406)
T 1xi9_A 79 GLPELRKAIVEREKRKNGVDITPDDVRVTAAVTEALQLIFGALLD--PGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIE 156 (406)
T ss_dssp CCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCC--TTCEEEEEESCCHHHHHHHHHTTCEEEEEEEEG
T ss_pred CcHHHHHHHHHHHHHhcCCCCCHHHEEEcCChHHHHHHHHHHhCC--CCCEEEEcCCCCccHHHHHHHcCCEEEEeecCC
Confidence 346999999999999888765556799999999999999988754 899999999999999999999999999999874
Q ss_pred --CCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCcccccccccccCC
Q 011842 216 --SGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAP 290 (476)
Q Consensus 216 --~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~ 290 (476)
++.+|+++|+++++++ +.+|++++++|++|.+.| +++|+++|++||+ |+++|++|+++.+ .....+
T Consensus 157 ~~~~~~d~~~l~~~l~~~---~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~-----~li~De~~~~~~~-~~~~~~ 227 (406)
T 1xi9_A 157 EEDWQPDIDDIRKKITDR---TKAIAVINPNNPTGALYDKKTLEEILNIAGEYEI-----PVISDEIYDLMTY-EGEHIS 227 (406)
T ss_dssp GGTSEECHHHHHHHCCTT---EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTC-----CEEEECTTTTCBS-SSCCCC
T ss_pred CcCCcCCHHHHHHhhCcC---ceEEEEECCCCCCCCCcCHHHHHHHHHHHHHcCC-----EEEEEcCcccccc-CCCCCC
Confidence 4579999999999654 347778889999999865 9999999999999 9999999987654 111111
Q ss_pred CCCCcccc-cEEEEcCCCCCC-CCCCceeEE--eeh----hhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhC
Q 011842 291 KVSFKKPI-GSVSVSGHKFVG-CPMPCGVQI--TRM----EHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKG 362 (476)
Q Consensus 291 ~~~~~~~~-Dsi~~s~hK~l~-~p~~~G~l~--~~~----~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g 362 (476)
...+.... |+++.++||+++ .++++|+++ .++ ++++.+.....+. .+.+......+..+++. +
T Consensus 228 ~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~l~~~l~~~~~~~--------~~~~~~~~~a~~~~l~~-~ 298 (406)
T 1xi9_A 228 PGSLTKDVPVIVMNGLSKVYFATGWRLGYMYFVDPENKLSEVREAIDRLARIR--------LCPNTPAQFAAIAGLTG-P 298 (406)
T ss_dssp HHHHCSSSCEEEEEESTTTTCCGGGCCEEEEEECTTCTTHHHHHHHHHHHHHT--------CCSCSHHHHHHHHHHHS-C
T ss_pred HHHcCCCceEEEEeccccccCCCccEEEEEEEecCchhHHHHHHHHHHHHHhh--------cCCCHHHHHHHHHHHhC-C
Confidence 01111124 788899999997 567799999 777 7665553222221 12222222222233322 3
Q ss_pred hhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEE-ecC-----CcHHHh------hceeecc-------cCCEE
Q 011842 363 YKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVF-ERP-----QDEEFV------RRWQLAC-------QGNIA 423 (476)
Q Consensus 363 ~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f-~~~-----~~~~~~------~~~~l~~-------~~~~l 423 (476)
.+.+++..++..++++++.+.|++.+...+..+..++++| ..+ +..++. +++.+.. ..+.+
T Consensus 299 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~l 378 (406)
T 1xi9_A 299 MDYLKEYMKKLKERRDYIYKRLNEIPGISTTKPQGAFYIFPKIEVGPWKNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHF 378 (406)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCCCBSSEECCEECSCSCSSHHHHHHHHHHHHCEECEEGGGGCGGGTTBE
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhCCCCeeecCCeeEEEEEecCccCCCCHHHHHHHHHHhCCEEEeCchhcCCCCCCEE
Confidence 4457788888999999999999987433344444333333 333 222222 2333321 14689
Q ss_pred EEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 011842 424 HVVVMPNVTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 424 Rv~~~~~~T~edid~~~~~l~~~~~~~ 450 (476)
|+++. +|+++|+.+++.|.++.+++
T Consensus 379 Ris~~--~~~~~i~~~~~~l~~~l~~~ 403 (406)
T 1xi9_A 379 RAVFL--PPIEILEEAMDRFEKFMKER 403 (406)
T ss_dssp EEECC--SCHHHHHHHHHHHHHHHHHC
T ss_pred EEEec--CCHHHHHHHHHHHHHHHHHH
Confidence 99986 89999999999999887654
No 69
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=99.93 E-value=4.4e-24 Score=217.11 Aligned_cols=288 Identities=11% Similarity=0.047 Sum_probs=211.8
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCC
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLI 215 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~ 215 (476)
+..++++++.+++.+.+|.+.+...+++|+|||+|+..++.+... |++.|+++.++|.++...++.+|++++.+|+++
T Consensus 69 g~~~lr~~ia~~~~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~ 146 (391)
T 3h14_A 69 GLPALRQRIARLYGEWYGVDLDPGRVVITPGSSGGFLLAFTALFD--SGDRVGIGAPGYPSYRQILRALGLVPVDLPTAP 146 (391)
T ss_dssp CCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCC--TTCEEEEEESCCHHHHHHHHHTTCEEEEEECCG
T ss_pred ChHHHHHHHHHHHHHHhCCCCCHHHEEEecChHHHHHHHHHHhcC--CCCEEEEcCCCCccHHHHHHHcCCEEEEeecCc
Confidence 356999999999999999765556799999999999999888865 899999999999999999999999999999985
Q ss_pred C--CccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCcccccccccccCC
Q 011842 216 S--GEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAP 290 (476)
Q Consensus 216 ~--g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~ 290 (476)
+ +.+|+++|+++ +++ +|++++++|++|.+.| +++|+++|++||+ ++++|++|+.+.+... ...
T Consensus 147 ~~~~~~d~~~l~~~---~~~---~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~-----~li~De~~~~~~~~~~-~~~ 214 (391)
T 3h14_A 147 ENRLQPVPADFAGL---DLA---GLMVASPANPTGTMLDHAAMGALIEAAQAQGA-----SFISDEIYHGIEYEAK-AVT 214 (391)
T ss_dssp GGTTSCCHHHHTTS---CCS---EEEEESSCTTTCCCCCHHHHHHHHHHHHHTTC-----EEEEECTTTTCBSSSC-CCC
T ss_pred ccCCCCCHHHHHhc---CCe---EEEECCCCCCCCccCCHHHHHHHHHHHHHcCC-----EEEEECcchhcccCCC-CcC
Confidence 4 46899999876 333 7788899999999987 8999999999999 9999999987654321 111
Q ss_pred CCCCcccccEEEEcCCCCCC-CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHh-ChhcHHH
Q 011842 291 KVSFKKPIGSVSVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRK-GYKGFQK 368 (476)
Q Consensus 291 ~~~~~~~~Dsi~~s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~-g~~g~~~ 368 (476)
.... ...++++.+++|+++ .++++|++++++++++.+.....+. ..+.+ .+.+++++..+ ..+.+++
T Consensus 215 ~~~~-~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~-------~~~~~---~~~~~a~~~~l~~~~~~~~ 283 (391)
T 3h14_A 215 ALEL-TDECYVINSFSKYFSMTGWRVGWMVVPEDQVRVVERIAQNM-------FICAP---HASQVAALAALDCDAELQA 283 (391)
T ss_dssp GGGT-CSSSEEEEESSSTTCCTTSCCEEEECCGGGHHHHHHHHHHT-------TCCCC---HHHHHHHHHHTTCHHHHHH
T ss_pred hhhc-CCCEEEEEechhccCCccceeEEEEeCHHHHHHHHHHHhhh-------ccCCC---HHHHHHHHHHhCChHHHHH
Confidence 1111 224577789999996 7889999999988765553221111 11221 34444443333 4456788
Q ss_pred HHHHHHHHHHHHHHHHHhcCCeEeecCC-eeEEEEecCC----cHHH----hh--ceeec--------ccCCEEEEEEcC
Q 011842 369 EVQKCLRNAHYLKDRLLDAGISAMLNEL-SSTVVFERPQ----DEEF----VR--RWQLA--------CQGNIAHVVVMP 429 (476)
Q Consensus 369 ~~~~~~~~a~~l~~~L~~~g~~~~~~~~-~~iv~f~~~~----~~~~----~~--~~~l~--------~~~~~lRv~~~~ 429 (476)
..++..++++++.+.|++.|+....++. ..++.+..+. ..++ .+ ++.+. ...+.+|+++..
T Consensus 284 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~iRis~~~ 363 (391)
T 3h14_A 284 NLDVYKANRKLMLERLPKAGFTRIAPPDGAFYVYADVSDLTDDSRAFAAEILEKAGVAVTPGLDFDPERGAGTLRFSYAR 363 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCCBCCCCBTTEEEEECTTTCSCHHHHHHHHHHHHCEECEEGGGTCTTTGGGEEEEECCS
T ss_pred HHHHHHHHHHHHHHHHHHcCCCcccCCCeeEEEEEecCccCCCHHHHHHHHHHHCCEEEcCchhhCCCCCCCeEEEEecC
Confidence 8889999999999999998876544444 3445444432 2222 22 34332 124689998775
Q ss_pred CCCHHHHHHHHHHHHHHHHHH
Q 011842 430 NVTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 430 ~~T~edid~~~~~l~~~~~~~ 450 (476)
++++|+.+++.|+++.++.
T Consensus 364 --~~~~i~~~l~~l~~~~~~~ 382 (391)
T 3h14_A 364 --ATADIEEGLDRLEAFMQAR 382 (391)
T ss_dssp --CHHHHHHHHHHHHHHHHHC
T ss_pred --CHHHHHHHHHHHHHHHHHh
Confidence 8899999999999887653
No 70
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=99.93 E-value=5.6e-24 Score=219.16 Aligned_cols=293 Identities=10% Similarity=-0.025 Sum_probs=212.6
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcc-cEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCC
Q 011842 136 HSRQFEVGVLDWFARLWELENNEY-WGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCL 214 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~-~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~ 214 (476)
+..++++++.+++.+.+|.+.+.. .+++|+||++|+..++.++.. +++.|+++.++|.++...++..|++++.+|.+
T Consensus 78 g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~--~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~ 155 (429)
T 1yiz_A 78 GHPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEALYATIQGHVD--EGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLK 155 (429)
T ss_dssp CCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHHHCC--TTCEEEEEESCCTTHHHHHHHTTCEEEEEECB
T ss_pred CcHHHHHHHHHHHHHHhCCCCCCcCCEEEecChHHHHHHHHHHhcC--CCCEEEEcCCCchhHHHHHHHcCCEEEEEeCC
Confidence 457999999999999888653334 699999999999999988765 88999999999999999999999999999987
Q ss_pred C----------CCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCcccc
Q 011842 215 I----------SGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGL 281 (476)
Q Consensus 215 ~----------~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~ 281 (476)
. ++.+|+++|++++.++ +.+|++++++|++|.+.| +++|+++|++||+ ++++|++|+++
T Consensus 156 ~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~-----~li~De~~~~~ 227 (429)
T 1yiz_A 156 PNKTGGTISSADWVLDNNELEALFNEK---TKMIIINTPHNPLGKVMDRAELEVVANLCKKWNV-----LCVSDEVYEHM 227 (429)
T ss_dssp CCCSSSSEEGGGCBCCHHHHHHHCCTT---EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTC-----EEEEECTTTTC
T ss_pred cccccccccccCcccCHHHHHHHhccC---ceEEEECCCCCCCCccCCHHHHHHHHHHHHHcCc-----EEEEecccccc
Confidence 5 3579999999998643 447777899999999975 9999999999999 99999999876
Q ss_pred cccccccCCCCCC--cccccEEEEcCCCCCC-CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHH
Q 011842 282 MMPFVKKAPKVSF--KKPIGSVSVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTL 358 (476)
Q Consensus 282 ~~~~~~~~~~~~~--~~~~Dsi~~s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l 358 (476)
.+......+...+ ....|++..++||+++ .++++|++++++++++.+.....+. .++.+......+..++
T Consensus 228 ~~~g~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~-------~~~~~~~~~~a~~~~l 300 (429)
T 1yiz_A 228 VFEPFEHIRICTLPGMWERTITIGSAGKTFSLTGWKIGWAYGPEALLKNLQMVHQNC-------VYTCATPIQEAIAVGF 300 (429)
T ss_dssp BCTTSCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEESCHHHHHHHHHHHHTT-------TCCCCHHHHHHHHHHH
T ss_pred ccCCCCCcChhhccCCcCceEEEecchhccCCCCcceEEEEeCHHHHHHHHHHHhhc-------ccCCChHHHHHHHHHH
Confidence 5432212111122 2237899999999987 5677999999988766553221111 1112212222333444
Q ss_pred HHh----C--hhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecCC--------------c-HHHh------
Q 011842 359 NRK----G--YKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERPQ--------------D-EEFV------ 411 (476)
Q Consensus 359 ~~~----g--~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~--------------~-~~~~------ 411 (476)
+.. + .+.+++..++..++++++.+.|++.|+....++...++.+..+. + .++.
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 380 (429)
T 1yiz_A 301 ETELKRLKSPECYFNSISGELMAKRDYMASFLAEVGMNPTVPQGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKS 380 (429)
T ss_dssp HHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHHHTCEEEECSBSSEEEEECCSSCTTTTCCSSSSSCHHHHHHHHHHHH
T ss_pred hcccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEEEcccccccccccccccCCCHHHHHHHHHHh
Confidence 441 2 34477888888999999999999888765444445566666543 1 1221
Q ss_pred hceeecc------------cCCEEEEEEcCCCCHHHHHHHHHHHHHHH
Q 011842 412 RRWQLAC------------QGNIAHVVVMPNVTIDKLDDFLNELIENR 447 (476)
Q Consensus 412 ~~~~l~~------------~~~~lRv~~~~~~T~edid~~~~~l~~~~ 447 (476)
+++.+.. ..+.+|+++. +++++|+++++.|+++.
T Consensus 381 ~gv~v~~g~~f~~~~~~~~~~~~iRis~~--~~~e~i~~~l~~l~~~l 426 (429)
T 1yiz_A 381 VGLQGIPPSAFYSEPNKHLGEDFVRYCFF--KKDENLQKAAEILRKWK 426 (429)
T ss_dssp TSEECBCGGGGSCGGGGGGTTTEEEEECC--SCHHHHHHHHHHHHHHS
T ss_pred CCEEEeCchHhCCCcccCCCCCeEEEEec--CCHHHHHHHHHHHHHhc
Confidence 2333321 1468999886 59999999999998764
No 71
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=99.93 E-value=1.6e-24 Score=222.18 Aligned_cols=294 Identities=13% Similarity=0.041 Sum_probs=212.1
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcc-cEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCC
Q 011842 136 HSRQFEVGVLDWFARLWELENNEY-WGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCL 214 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~-~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~ 214 (476)
+..++++++.+++.+.+|.+.+.. .+++|+|||+|+..++.++.. |++.|++++++|.++...++..|++++.+|++
T Consensus 63 g~~~l~~~la~~~~~~~g~~~~~~~~v~~t~g~~~al~~~~~~~~~--~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~ 140 (411)
T 2o0r_A 63 GSAPLRRAIAAQRRRHFGVDYDPETEVLVTVGATEAIAAAVLGLVE--PGSEVLLIEPFYDSYSPVVAMAGAHRVTVPLV 140 (411)
T ss_dssp CCHHHHHHHHHHHHHHHCCCCCTTTSEEEEEHHHHHHHHHHHHHCC--TTCEEEEEESCCTTHHHHHHHTTCEEEEEECE
T ss_pred CCHHHHHHHHHHHHHHcCCCCCCCceEEEeCCHHHHHHHHHHHhcC--CCCEEEEeCCCcHhHHHHHHHcCCEEEEeecc
Confidence 457999999999999989764333 699999999999999988764 89999999999999999999999999999986
Q ss_pred CC---CccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCccccccccccc
Q 011842 215 IS---GEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKK 288 (476)
Q Consensus 215 ~~---g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~ 288 (476)
++ +.+|+++|++++.++ +.+|++++++|++|.+.| +++|+++|++||+ ++++|++|+++.+.....
T Consensus 141 ~~~~~~~~d~~~l~~~l~~~---~~~v~l~~~~nptG~~~~~~~l~~i~~~~~~~~~-----~li~De~~~~~~~~g~~~ 212 (411)
T 2o0r_A 141 PDGRGFALDADALRRAVTPR---TRALIINSPHNPTGAVLSATELAAIAEIAVAANL-----VVITDEVYEHLVFDHARH 212 (411)
T ss_dssp EETTEEECCHHHHHHHCCTT---EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTC-----EEEEECTTTTCBCTTCCC
T ss_pred ccccCCCCCHHHHHHhhccC---ceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCC-----EEEEEccccccccCCCCC
Confidence 43 569999999998643 447778889999999865 6999999999999 999999998765432111
Q ss_pred CCCCCCc--ccccEEEEcCCCCCC-CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhc
Q 011842 289 APKVSFK--KPIGSVSVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKG 365 (476)
Q Consensus 289 ~~~~~~~--~~~Dsi~~s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g 365 (476)
.+...+. ...|+++.++||+++ .++++|++++++++++.+.....+. ..+.+......+..+++. +.+.
T Consensus 213 ~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~-------~~~~~~~~~~a~~~~l~~-~~~~ 284 (411)
T 2o0r_A 213 LPLAGFDGMAERTITISSAAKMFNCTGWKIGWACGPAELIAGVRAAKQYL-------SYVGGAPFQPAVALALDT-EDAW 284 (411)
T ss_dssp CCGGGSTTTGGGEEEEEEHHHHTTCTTTCEEEEECCHHHHHHHHHHHHHH-------TSCCCTTHHHHHHHHHHH-CHHH
T ss_pred cChhhccCCCCCEEEEeechhhcCCccceEEEEeeCHHHHHHHHHHHhhc-------cCCCChHHHHHHHHHHhC-ChHH
Confidence 1111221 237899999999997 5677999999887766553222221 111122222333344443 2456
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecCC-----cHHH----h--hceeec----c------------
Q 011842 366 FQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERPQ-----DEEF----V--RRWQLA----C------------ 418 (476)
Q Consensus 366 ~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~-----~~~~----~--~~~~l~----~------------ 418 (476)
+++..++..++++++.+.|++.|+....++...++.+..+. ..++ . +++.+. +
T Consensus 285 ~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~~~~ 364 (411)
T 2o0r_A 285 VAALRNSLRARRDRLAAGLTEIGFAVHDSYGTYFLCADPRPLGYDDSTEFCAALPEKVGVAAIPMSAFCDPAAGQASQQA 364 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCEECCCCBSSEEEEECGGGTCCCHHHHHHHHHHHHSEECEEGGGGSCCC--------
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCEecCCCeeEEEEEecCCCCCCCHHHHHHHHHHhCCEEEcChhhhCCCccccccccc
Confidence 77888889999999999999887654433334456666542 2222 2 233331 1
Q ss_pred --cCCEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Q 011842 419 --QGNIAHVVVMPNVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 419 --~~~~lRv~~~~~~T~edid~~~~~l~~~~~~ 449 (476)
..+.+|+++. +++++|+.+++.|+++.++
T Consensus 365 ~~~~~~iRis~~--~~~e~i~~~~~~l~~~~~~ 395 (411)
T 2o0r_A 365 DVWNHLVRFTFC--KRDDTLDEAIRRLSVLAER 395 (411)
T ss_dssp CCGGGCEEEECC--SCHHHHHHHHHHHGGGGC-
T ss_pred cCCCCeEEEEec--CCHHHHHHHHHHHHHHHhc
Confidence 2357999875 4899999999999876543
No 72
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.93 E-value=1.9e-24 Score=217.51 Aligned_cols=286 Identities=11% Similarity=0.087 Sum_probs=200.8
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchH--HHHHHHHcCCeEEEEeC
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYS--VFKAARMYRMECVKVDC 213 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S--~~~~~~~~G~~v~~v~~ 213 (476)
...++.+++++++++++|.+.+....++|+|||+|+..++.+... ||+.|++....|++ +...++..| +++.++.
T Consensus 46 ~~~~~~~~~~~~la~~~g~~~~~~~i~~t~g~t~a~~~~~~~l~~--~gd~vl~~~~~~~~~~~~~~~~~~g-~~~~v~~ 122 (362)
T 2c0r_A 46 VYEAVHNEAQARLLALLGNPTGYKVLFIQGGASTQFAMIPMNFLK--EGQTANYVMTGSWASKALKEAKLIG-DTHVAAS 122 (362)
T ss_dssp HHHHHHHHHHHHHHHHTTCCSSEEEEEESSHHHHHHHHHHHHHCC--TTCEEEEEECSHHHHHHHHHHHHHS-CEEEEEE
T ss_pred HHHHHHHHHHHHHHHHhCCCCCcEEEEECCCchHHHHHHHHhcCC--CCCeEEEEecCcHhHHHHHHHHHhC-CeEEEec
Confidence 456788899999999999974212246789999999999888765 88998887777776 346777889 9999998
Q ss_pred CC--CC--ccCHHHHHHHHHcCCCCcEEEEEeeCCCccccc-cCHHHHHHHHHHhCCCCCceEEEEecCccccccccccc
Q 011842 214 LI--SG--EIDCADFKAKLLQNKDKPAIINVNIGTTVKGAV-DDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKK 288 (476)
Q Consensus 214 ~~--~g--~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~i-d~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~ 288 (476)
+. +. .+|.++++ +.+ ++.+|++++++|+||.+ .|+++| ||+ |+|+|++|+.+..+
T Consensus 123 ~~~~~~~~~~~~~~~~--i~~---~t~~v~~~~~~n~tG~~~~~l~~i------~~~-----~vivD~a~~~~~~~---- 182 (362)
T 2c0r_A 123 SEASNYMTLPKLQEIQ--LQD---NAAYLHLTSNETIEGAQFKAFPDT------GSV-----PLIGDMSSDILSRP---- 182 (362)
T ss_dssp CGGGTTCSCCCGGGCC--CCT---TEEEEEEESEETTTTEECSSCCCC------TTS-----CEEEECTTTTTSSC----
T ss_pred ccccccccCCCHHHcc--cCC---CcCEEEEeCCcCccceeccccccc------CCC-----EEEEEChhhccCCc----
Confidence 62 22 35665553 433 34588899999999995 888887 899 99999999865443
Q ss_pred CCCCCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCC-----CCCcccCCCCChhHHHHHHHHHHhCh
Q 011842 289 APKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLAS-----RDATIMGSRNGHAPIFLWYTLNRKGY 363 (476)
Q Consensus 289 ~~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~-----~~~~~~~sr~~~~~l~~~~~l~~~g~ 363 (476)
+++.+ .|+++.++|||++ |.|+|++++++++++.+.....++.. ......++.+......+.++++.+..
T Consensus 183 ---~~~~~-~d~~~~s~~K~~g-~~G~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~ 257 (362)
T 2c0r_A 183 ---FDLNQ-FGLVYAGAQKNLG-PSGVTVVIVREDLVAESPKHLPTMLRYDTYVKNNSLYNTPPSFGIYMVNEVLKWIEE 257 (362)
T ss_dssp ---CCGGG-CSEEEEETTTTTC-CSSCEEEEEEGGGSSSCCTTSCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHH
T ss_pred ---cchhH-CcEEEEecccccc-CcCcEEEEEcHHHHhhccccCchHHhHHHHhhccCcCCCchHHHHHHHHHHHHHHHH
Confidence 23322 4999999999997 78899999998876555332112210 00112344443334455566665544
Q ss_pred h-cHHHHHHHHHHHHHHHHHHHHhcC-C-eEeec---CCeeEEEEecCC---cHHHhh-----ceeecc---cCCEEEEE
Q 011842 364 K-GFQKEVQKCLRNAHYLKDRLLDAG-I-SAMLN---ELSSTVVFERPQ---DEEFVR-----RWQLAC---QGNIAHVV 426 (476)
Q Consensus 364 ~-g~~~~~~~~~~~a~~l~~~L~~~g-~-~~~~~---~~~~iv~f~~~~---~~~~~~-----~~~l~~---~~~~lRv~ 426 (476)
. +++++.++..++++++.+.|++.| + ....+ +...+++|..+. ..++.+ +..+.. ..+.+|++
T Consensus 258 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gi~~~~g~~~~~~iRis 337 (362)
T 2c0r_A 258 RGGLEGVQQANRKKASLIYDAIDQSGGFYRGCVDVDSRSDMNITFRLASEELEKEFVKASEQEGFVGLKGHRSVGGLRAS 337 (362)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHTSTTSSEESSCGGGBCSSEEEEECSCHHHHHHHHHHHHHTTEESCBCCTTTCSEEEE
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHcCCccccCCChHHcCCcEEEEEcCCcchHHHHHHHHHHCCCeeccCCCCCCEEEEE
Confidence 4 689999999999999999999988 5 43322 124567777664 223322 222211 13569999
Q ss_pred EcCCCCHHHHHHHHHHHHHHHHH
Q 011842 427 VMPNVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 427 ~~~~~T~edid~~~~~l~~~~~~ 449 (476)
++..+|++|+++++++|+++.++
T Consensus 338 ~~~~~~~e~i~~l~~~l~~~~~~ 360 (362)
T 2c0r_A 338 IYNAVPYESCEALVQFMEHFKRS 360 (362)
T ss_dssp CCTTSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHh
Confidence 99999999999999999988654
No 73
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=99.93 E-value=5.9e-24 Score=217.95 Aligned_cols=293 Identities=11% Similarity=0.054 Sum_probs=211.7
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCc-ccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCC
Q 011842 136 HSRQFEVGVLDWFARLWELENNE-YWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCL 214 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~-~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~ 214 (476)
+..++++++.+++.+.+|.+.+. ..+++|+||++|+..++.++.. |++.|+++.++|.++...++..|++++.+|.+
T Consensus 76 g~~~l~~~ia~~~~~~~g~~~~~~~~v~~t~g~~~a~~~~~~~~~~--~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~ 153 (412)
T 2x5d_A 76 GIPRLRRAISHWYRDRYDVQIDPESEAIVTIGSKEGLAHLMLATLD--HGDTILVPNPSYPIHIYGAVIAGAQVRSVPLV 153 (412)
T ss_dssp CCHHHHHHHHHHHHHHHCCCCCTTTSEEEESCHHHHHHHHHHHHCC--TTCEEEEEESCCHHHHHHHHHHTCEEEEEECS
T ss_pred CcHHHHHHHHHHHHHHhCCCCCCCcCEEEcCChHHHHHHHHHHhCC--CCCEEEEcCCCchhHHHHHHHcCCEEEEeecC
Confidence 45789999999998888975333 3699999999999999988754 88999999999999999999999999999987
Q ss_pred CC-C-ccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCcccccccccccC
Q 011842 215 IS-G-EIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKA 289 (476)
Q Consensus 215 ~~-g-~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~ 289 (476)
++ + .+|+++|++++.++++ +|++++++|++|.+.| +++|+++|++||+ ++++|++|+.+.+......
T Consensus 154 ~~~~~~~d~~~l~~~i~~~~~---~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~-----~li~De~~~~~~~~g~~~~ 225 (412)
T 2x5d_A 154 PGIDFFNELERAIRESIPKPR---MMILGFPSNPTAQCVELDFFERVVALAKQYDV-----MVVHDLAYADIVYDGWKAP 225 (412)
T ss_dssp TTSCHHHHHHHHHHTEESCCS---EEEEESSCTTTCCCCCHHHHHHHHHHHHHHTC-----EEEEECTTTTCBCTTCCCC
T ss_pred CccCCCCCHHHHHHhcccCce---EEEECCCCCCCCCcCCHHHHHHHHHHHHHcCC-----EEEEeccccccccCCCCCC
Confidence 64 3 4899999998875544 6777889999999865 7899999999999 9999999987664322111
Q ss_pred CCCCCc--ccccEEEEcCCCCCC-CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHh--Chh
Q 011842 290 PKVSFK--KPIGSVSVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRK--GYK 364 (476)
Q Consensus 290 ~~~~~~--~~~Dsi~~s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~--g~~ 364 (476)
+...+. ...++++.++||+++ .++++|++++++++++.+.....+. ..+.+ .+.++++...+ +.+
T Consensus 226 ~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~-------~~~~~---~~~~~a~~~~l~~~~~ 295 (412)
T 2x5d_A 226 SIMQVPGAKDIAVEFFTLSKSYNMAGWRIGFMVGNPELVSALARIKSYH-------DYGTF---TPLQVAAIAALEGDQQ 295 (412)
T ss_dssp CGGGSTTGGGTEEEEEECC-CCSCTTSCCEEEEECHHHHHHHHHHHHHH-------CCCCC---HHHHHHHHHHHHSCSH
T ss_pred ChhhccCccCcEEEEecCccccCCcccceEEEEcCHHHHHHHHHHHhhh-------ccCCC---HHHHHHHHHHHhCCHH
Confidence 112221 236888999999997 6778999999888766553221111 11111 33444444433 234
Q ss_pred cHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecCC------cHHHh------hceeecc-------cCCEEEE
Q 011842 365 GFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERPQ------DEEFV------RRWQLAC-------QGNIAHV 425 (476)
Q Consensus 365 g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~------~~~~~------~~~~l~~-------~~~~lRv 425 (476)
.+++..++..++++++.+.|++.|+....+....++.+..+. ..++. +++.+.. ..+.+|+
T Consensus 296 ~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRi 375 (412)
T 2x5d_A 296 CVRDIARQYQQRRDVLVKGLREAGWMVENPKASMYVWAKIPEPYAHLGSLEFAKKLLQDAKVSVSPGIGFGDYGDDHVRF 375 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCCCCCSBSSEEEEECCTTTGGGCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCEecCCCeeeEEEEEcCCccCCCCHHHHHHHHHHHCCEEEeCchhhCCCCCCeEEE
Confidence 577888888999999999999887654333323455566542 22221 2343321 2468999
Q ss_pred EEcCCCCHHHHHHHHHHHHHHHHHH
Q 011842 426 VVMPNVTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 426 ~~~~~~T~edid~~~~~l~~~~~~~ 450 (476)
++.. ++++|+.+++.|.++.+++
T Consensus 376 s~~~--~~~~l~~~l~~l~~~l~~~ 398 (412)
T 2x5d_A 376 ALIE--NRDRLRQAVRGIKAMFRAD 398 (412)
T ss_dssp ECCS--CHHHHHHHHHHHHHHHHHT
T ss_pred EecC--CHHHHHHHHHHHHHHHHhc
Confidence 8875 8999999999999887653
No 74
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=99.93 E-value=1.2e-23 Score=212.39 Aligned_cols=286 Identities=11% Similarity=0.055 Sum_probs=206.4
Q ss_pred HHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCC
Q 011842 138 RQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISG 217 (476)
Q Consensus 138 ~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g 217 (476)
.++++++.+++.+.+|.+.+...+++|+|||+|+..++.++.. |++.|+++.++|.++...++..|++++.+|++++
T Consensus 61 ~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~a~~~~~~~~~~--~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~- 137 (377)
T 3fdb_A 61 SLLSQATAEFYADRYGYQARPEWIFPIPDVVRGLYIAIDHFTP--AQSKVIVPTPAYPPFFHLLSATQREGIFIDATGG- 137 (377)
T ss_dssp CCHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSC--TTCCEEEEESCCTHHHHHHHHHTCCEEEEECTTS-
T ss_pred HHHHHHHHHHHHHHhCCCCCHHHEEEeCChHHHHHHHHHHhcC--CCCEEEEcCCCcHhHHHHHHHcCCEEEEccCCCC-
Confidence 4788999999998888765556799999999999999888765 8899999999999999999999999999999866
Q ss_pred ccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCcccccccc-cccCCCCC
Q 011842 218 EIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPF-VKKAPKVS 293 (476)
Q Consensus 218 ~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~-~~~~~~~~ 293 (476)
+|+++|++++.++++ ++++++++|++|.+.| +++|+++|++||+ ++++|++|+.+.... ....+...
T Consensus 138 -~d~~~l~~~l~~~~~---~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~-----~li~De~~~~~~~~g~~~~~~~~~ 208 (377)
T 3fdb_A 138 -INLHDVEKGFQAGAR---SILLCNPYNPLGMVFAPEWLNELCDLAHRYDA-----RVLVDEIHAPLVFDGQHTVAAGVS 208 (377)
T ss_dssp -CCHHHHHHHHHTTCC---EEEEESSBTTTTBCCCHHHHHHHHHHHHHTTC-----EEEEECTTGGGBSSSCCCCGGGSC
T ss_pred -CCHHHHHHHhccCCC---EEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCC-----EEEEEcccchhhcCCCCCcccHHH
Confidence 999999999988754 7888899999999864 7778888999999 999999998765532 12211112
Q ss_pred Ccc-cccEEEEcCCCCCC-CCCCceeEEe-ehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHh--ChhcHHH
Q 011842 294 FKK-PIGSVSVSGHKFVG-CPMPCGVQIT-RMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRK--GYKGFQK 368 (476)
Q Consensus 294 ~~~-~~Dsi~~s~hK~l~-~p~~~G~l~~-~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~--g~~g~~~ 368 (476)
... ..+.+..+++|+++ .++++|++++ ++++.+.+.....+. .++.+ .+.++++...+ +.+.+++
T Consensus 209 ~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~-------~~~~~---~~~~~a~~~~l~~~~~~~~~ 278 (377)
T 3fdb_A 209 DTAASVCITITAPSKAWNIAGLKCAQIIFSNPSDAEHWQQLSPVI-------KDGAS---TLGLIAAEAAYRYGTDFLNQ 278 (377)
T ss_dssp HHHHHHEEEEECSTTTTTCGGGCCEEEECCSHHHHHHHHHSCHHH-------HCCCC---HHHHHHHHHHHHHCHHHHHH
T ss_pred ccCCCcEEEEEeChHhccCcchhheEEEeCCHHHHHHHHHHHHhh-------cCCCC---HHHHHHHHHHHhccHHHHHH
Confidence 111 24578889999994 6788998887 455555553222211 11221 33333333333 2345678
Q ss_pred HHHHHHHHHHHHHHHHHhc--CCeEeecCCe-eEEEEecCC---c----HHHhh--ceeecc-------cCCEEEEEEcC
Q 011842 369 EVQKCLRNAHYLKDRLLDA--GISAMLNELS-STVVFERPQ---D----EEFVR--RWQLAC-------QGNIAHVVVMP 429 (476)
Q Consensus 369 ~~~~~~~~a~~l~~~L~~~--g~~~~~~~~~-~iv~f~~~~---~----~~~~~--~~~l~~-------~~~~lRv~~~~ 429 (476)
..++..++++++.+.|++. ++.. ..+.. .++.+..+. + ..+.+ ++.+.. ..+.+|++++
T Consensus 279 ~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~Ris~~- 356 (377)
T 3fdb_A 279 EVAYLKNNHDFLLHEIPKRIPGAKI-TPMQATYLMWIDFRDTTIEGSPSEFFIEKAKVAMNDGAWFGEDGTGFCRLNFA- 356 (377)
T ss_dssp HHHHHHHHHHHHHHHHHHHSTTCEE-CCCSBCSEEEEECTTSCCCSCHHHHHHHHHCEECEEGGGGCGGGTTEEEEECC-
T ss_pred HHHHHHHHHHHHHHHHHhhCCCceE-ecCCeeEEEEEECcccCCCHHHHHHHHHhCCEEecCChhccCCCCCEEEEEeC-
Confidence 8889999999999999984 5543 34444 333455442 1 12222 344321 2478999877
Q ss_pred CCCHHHHHHHHHHHHHHHH
Q 011842 430 NVTIDKLDDFLNELIENRS 448 (476)
Q Consensus 430 ~~T~edid~~~~~l~~~~~ 448 (476)
+++++|+.+++.|+++.+
T Consensus 357 -~~~e~i~~~l~~l~~~l~ 374 (377)
T 3fdb_A 357 -TSREVLEEAIDRMAKAVS 374 (377)
T ss_dssp -SCHHHHHHHHHHHHHHHT
T ss_pred -CCHHHHHHHHHHHHHHHh
Confidence 489999999999988764
No 75
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.93 E-value=2.8e-24 Score=220.12 Aligned_cols=281 Identities=14% Similarity=0.081 Sum_probs=201.2
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCc
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGE 218 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~ 218 (476)
++..++++++++++|.+. .+++++||+||..++.+... |++.|+++.+.|.++..+++..|++++.++.
T Consensus 104 ~~~~~l~~~la~~~g~~~----~i~~~sGt~a~~~~l~~~~~--~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~----- 172 (409)
T 3kki_A 104 YDKPMIEKRLAKFTGFDE----CLLSQSGWNANVGLLQTICQ--PNTNVYIDFFAHMSLWEGARYANAQAHPFMH----- 172 (409)
T ss_dssp TTSCHHHHHHHHHHTCSE----EEEESCHHHHHHHHHHHHCC--TTCEEEEETTSCHHHHHHHHHTTCEEEEECT-----
T ss_pred HHHHHHHHHHHHHhCCCe----EEEecchHHHHHHHHHHhcC--CCCEEEECCCcCHHHHHHHHHcCCeEEEecC-----
Confidence 455567778888888863 56777889999999888765 9999999999999999999999999988876
Q ss_pred cCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccc-cccC-CCCCCcc
Q 011842 219 IDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPF-VKKA-PKVSFKK 296 (476)
Q Consensus 219 ~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~-~~~~-~~~~~~~ 296 (476)
+|+++|++++.+.. +.+|+++.+.+++|.+.|+++|.++|++||+ |+++|++|+++.+.. .... .......
T Consensus 173 ~d~~~le~~l~~~~--~~~vi~~~~~nptG~~~~l~~l~~la~~~~~-----~li~De~~~~g~~g~~g~~~~~~~~~~~ 245 (409)
T 3kki_A 173 NNCDHLRMLIQRHG--PGIIVVDSIYSTLGTIAPLAELVNISKEFGC-----ALLVDESHSLGTHGPNGAGLLAELGLTR 245 (409)
T ss_dssp TCHHHHHHHHHHHC--SCEEEEESBCTTTCCBCCHHHHHHHHHHHTC-----EEEEECTTTTTTSSGGGCCHHHHHTCGG
T ss_pred CCHHHHHHHHHhcC--CeEEEECCCCCCCCCcCCHHHHHHHHHHcCC-----EEEEECCccccccCCCCCcchhhcCCCC
Confidence 48999999998642 2388888999999999999999999999999 999999998654321 1110 0112223
Q ss_pred cccEEEEcCCCCCCCCCCceeEEeehhhhhhhcC-CccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHHH
Q 011842 297 PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSS-NVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLR 375 (476)
Q Consensus 297 ~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~-~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~ 375 (476)
.+|+++.+++|+++.+ .|+++.++++++.+.. ...|.. ..+.+.....++.++++.+. ..++..++..+
T Consensus 246 ~~di~~~s~sK~~~~~--gg~v~~~~~~~~~~~~~~~~~~~------~~~~~~~~~aa~~aal~~~~--~~~~~~~~~~~ 315 (409)
T 3kki_A 246 EVHFMTASLAKTFAYR--AGAIWCNNEVNRCVPFISYPAIF------SSTLLPYEAAGLETTLEIIE--SADNRRQHLDR 315 (409)
T ss_dssp GCSEEEEESSSTTCSS--CEEEEESSSGGGTHHHHCHHHHH------SBCCCHHHHHHHHHHHHHHH--HCHHHHHHHHH
T ss_pred CCCEEEeecchhhCCC--ceEEEECHHHHHHHHHhCcCccc------cCCCcHHHHHHHHHHHHHHh--cCHHHHHHHHH
Confidence 4789999999999865 5888888876654432 112211 11111112223334444332 22567788889
Q ss_pred HHHHHHHHHHhcCCeEeecCCeeEEEEecCCc---HHHh-----hceee--------cccCCEEEEEEcCCCCHHHHHHH
Q 011842 376 NAHYLKDRLLDAGISAMLNELSSTVVFERPQD---EEFV-----RRWQL--------ACQGNIAHVVVMPNVTIDKLDDF 439 (476)
Q Consensus 376 ~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~~---~~~~-----~~~~l--------~~~~~~lRv~~~~~~T~edid~~ 439 (476)
++++|.+.|++.|+... ...+++.+..+.. .++. ++..+ +...+.+|++++..+|+++|+++
T Consensus 316 ~~~~l~~~L~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~L~~~Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~ 393 (409)
T 3kki_A 316 MARKLRIGLSQLGLTIR--SESQIIGLETGDERNTEKVRDYLESNGVFGSVFCRPATSKNKNIIRLSLNSDVNDEQIAKI 393 (409)
T ss_dssp HHHHHHHHHHTTTCCCC--CSSSEEEEEEESHHHHHHHHHHHHHTTEECEEECTTSSCTTCEEEEEECCTTCCHHHHHHH
T ss_pred HHHHHHHHHHHcCCccC--CCCCEEEEEeCCHHHHHHHHHHHHHCCceEeeeCCCCcCCCCcEEEEEccCCCCHHHHHHH
Confidence 99999999999886533 3455666655432 1222 22323 12247899999999999999999
Q ss_pred HHHHHHHHHH
Q 011842 440 LNELIENRST 449 (476)
Q Consensus 440 ~~~l~~~~~~ 449 (476)
+++|+++.+.
T Consensus 394 ~~~l~~~l~~ 403 (409)
T 3kki_A 394 IEVCSDAVNY 403 (409)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhc
Confidence 9999988764
No 76
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=99.93 E-value=6.8e-24 Score=216.12 Aligned_cols=294 Identities=12% Similarity=0.049 Sum_probs=208.6
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCC-cEEEecCCCchHHHHHHHHcCCeEEEEeCC
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPD-GILYASRESHYSVFKAARMYRMECVKVDCL 214 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~-~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~ 214 (476)
+..++++++.+++.+.+|.+.+...+++|+|+|+|+..++.++.. |+ +.|+++.++|.++...++..|++++.+|++
T Consensus 77 g~~~lr~~la~~l~~~~g~~~~~~~i~~~~g~~~al~~~~~~l~~--~g~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~ 154 (398)
T 3ele_A 77 GDVETRAAIAEFLNNTHGTHFNADNLYMTMGAAASLSICFRALTS--DAYDEFITIAPYFPEYKVFVNAAGARLVEVPAD 154 (398)
T ss_dssp CCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCC--STTCEEEEESSCCTHHHHHHHHTTCEEEEECCC
T ss_pred CcHHHHHHHHHHHHHHhCCCCChHHEEEccCHHHHHHHHHHHHcC--CCCCEEEEeCCCchhhHHHHHHcCCEEEEEecC
Confidence 456999999999999999765556799999999999999988865 88 999999999999999999999999999997
Q ss_pred C-CCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHH------hCCCCCceEEEEecCccccccc
Q 011842 215 I-SGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEE------SGFTQDRFYIHCDGALFGLMMP 284 (476)
Q Consensus 215 ~-~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~------~g~~~~~~~lhvD~a~~g~~~~ 284 (476)
+ ++.+|+++|++++.+++ .+|++++++|++|.+.| +++|+++|++ ||+ ++++|++|+.+.+.
T Consensus 155 ~~~~~~d~~~l~~~l~~~~---~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~-----~li~De~~~~~~~~ 226 (398)
T 3ele_A 155 TEHFQIDFDALEERINAHT---RGVIINSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPI-----FIIADEPYREIVYD 226 (398)
T ss_dssp TTTSSCCHHHHHHTCCTTE---EEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHHHTSCC-----EEEEECTTTTCBCT
T ss_pred CcCCcCCHHHHHHHhCcCC---CEEEEcCCCCCCCCCCCHHHHHHHHHHHHhhhhccCCCe-----EEEEeccccccccC
Confidence 5 46899999999986544 47888899999999987 7778899999 999 99999999876543
Q ss_pred ccccCCCCCCcccccEEEEcCCCCCC-CCCCceeEEeehhhhhh--hcCCccccCCCCCcccCCCCChhHHHHHHHHHHh
Q 011842 285 FVKKAPKVSFKKPIGSVSVSGHKFVG-CPMPCGVQITRMEHINV--LSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRK 361 (476)
Q Consensus 285 ~~~~~~~~~~~~~~Dsi~~s~hK~l~-~p~~~G~l~~~~~~~~~--l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~ 361 (476)
.. ..+........+++..+++|+++ .++++|++++++++.+. +......... ..++- ....+.++++...+
T Consensus 227 ~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~a~~~~l 300 (398)
T 3ele_A 227 GI-KVPFVTKYYDNTLVCYSYSKSLSLPGERIGYVLVPDEVYDKAELYAAVCGAGR----ALGYV-CAPSLFQKMIVKCQ 300 (398)
T ss_dssp TC-CCCCGGGTCSSEEEEEESTTTSSCTTTCCEEEECCTTSTTHHHHHHHHHHHHH----HTTCC-CSCHHHHHHHTTCT
T ss_pred CC-CcCChHhhcCCeEEEEehhhcCCCccceeEEEEEcchhhhHHHHHHHHHHHhh----hcccc-CCCHHHHHHHHHHh
Confidence 21 11111111125678889999997 78999999999874321 1000000000 00000 11234444444433
Q ss_pred ChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecCC--cHHHhh-----ceeecc-----cCCEEEEEEcC
Q 011842 362 GYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERPQ--DEEFVR-----RWQLAC-----QGNIAHVVVMP 429 (476)
Q Consensus 362 g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~--~~~~~~-----~~~l~~-----~~~~lRv~~~~ 429 (476)
.... ..++..++++++.+.|++.|+....+.....+.+..+. ..++.+ ++.+.. ..+.+|+++.
T Consensus 301 ~~~~---~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~iRis~~- 376 (398)
T 3ele_A 301 GATG---DINAYKENRDLLYEGLTRIGYHCFKPDGAFYMFVKALEDDSNAFCEKAKEEDVLIVAADGFGCPGWVRISYC- 376 (398)
T ss_dssp TCCC---CHHHHHHHHHHHHHHHHHHTCCEECCSBSSEEEEECSSSCHHHHHHHHHTTTEECEESGGGTCTTEEEEECC-
T ss_pred cCHH---HHHHHHHHHHHHHHHHHHcCCeecCCCeeEEEEEEcCCCCHHHHHHHHHHCCEEEeCccccCCCCeEEEEec-
Confidence 2222 35667788889999999888755444444446666553 233322 233321 1478999885
Q ss_pred CCCHHHHHHHHHHHHHHHHHH
Q 011842 430 NVTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 430 ~~T~edid~~~~~l~~~~~~~ 450 (476)
+|+++|+++++.|.++.+++
T Consensus 377 -~~~e~i~~~l~~l~~~l~~~ 396 (398)
T 3ele_A 377 -VDREMIKHSMPAFEKIYKKY 396 (398)
T ss_dssp -SCHHHHHHHHHHHHHHHHHH
T ss_pred -CCHHHHHHHHHHHHHHHHHh
Confidence 79999999999999988765
No 77
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=99.93 E-value=5.7e-24 Score=214.32 Aligned_cols=275 Identities=11% Similarity=0.044 Sum_probs=202.9
Q ss_pred HHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccCHH
Q 011842 143 GVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCA 222 (476)
Q Consensus 143 ~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~~ 222 (476)
++++++++++|.+ +...+++|+|+|+|+..++.+... +++.|+++.++|.++...++..|++++.+|.++++.+|++
T Consensus 71 ~l~~~la~~~g~~-~~~~i~~~~g~t~a~~~~~~~~~~--~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~ 147 (367)
T 3euc_A 71 ALRAKLKEVMQVP-AGMEVLLGNGSDEIISMLALAAAR--PGAKVMAPVPGFVMYAMSAQFAGLEFVGVPLRADFTLDRG 147 (367)
T ss_dssp HHHHHHHHHHTCC-TTCEEEEEEHHHHHHHHHHHHTCC--TTCEEEEEESCSCCSCHHHHTTTCEEEEEECCTTSCCCHH
T ss_pred HHHHHHHHHhCCC-CcceEEEcCCHHHHHHHHHHHHcC--CCCEEEEcCCCHHHHHHHHHHcCCeEEEecCCCCCCCCHH
Confidence 4455567777883 223599999999999999887754 8999999999999999999999999999999988999999
Q ss_pred HHHHHHHc-CCCCcEEEEEeeCCCccccc---cCHHHHHHHHHHh--CCCCCceEEEEecCcccccccccccCCCCCCcc
Q 011842 223 DFKAKLLQ-NKDKPAIINVNIGTTVKGAV---DDLDLVIQTLEES--GFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKK 296 (476)
Q Consensus 223 ~Le~~l~~-~~~~p~~vv~t~gtt~tG~i---d~l~~I~~ia~~~--g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~ 296 (476)
+|++++.+ +++ +|++++++|++|.+ +++++|+++|++| |+ ++++|++|+.+... ...+.++. .
T Consensus 148 ~l~~~l~~~~~~---~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~~-----~li~De~~~~~~~~--~~~~~~~~-~ 216 (367)
T 3euc_A 148 AMLAAMAEHQPA---IVYLAYPNNPTGNLFDAADMEAIVRAAQGSVCRS-----LVVVDEAYQPFAQE--SWMSRLTD-F 216 (367)
T ss_dssp HHHHHHHHHCCS---EEEEESSCTTTCCCCCHHHHHHHHHHTBTTSCBC-----EEEEECTTCCSSSC--CSGGGGGT-C
T ss_pred HHHHHhhccCCC---EEEEcCCCCCCCCCCCHHHHHHHHHhhhhcCCCc-----EEEEeCcchhhccc--chHHHHhh-C
Confidence 99999987 665 77788999999999 4588888889999 99 99999999864421 11111111 1
Q ss_pred cccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhC-hhcHHHHHHHHHH
Q 011842 297 PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKG-YKGFQKEVQKCLR 375 (476)
Q Consensus 297 ~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g-~~g~~~~~~~~~~ 375 (476)
..+++..+++|++..+.++|++++++++.+.+...... .+. ..+.++++...+. .+.+++..++..+
T Consensus 217 ~~~i~~~s~sK~~~~G~r~G~~~~~~~~~~~~~~~~~~---------~~~---~~~~~~a~~~~l~~~~~~~~~~~~~~~ 284 (367)
T 3euc_A 217 GNLLVMRTVSKLGLAGIRLGYVAGDPQWLEQLDKVRPP---------YNV---NVLTEATALFALEHVAVLDEQAAQLRA 284 (367)
T ss_dssp TTEEEEEECCCTTSCSCCEEEEEECHHHHHHHGGGCCS---------SCC---CHHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred CCEEEEecchhhcccccCceeeeeCHHHHHHHHHhCCC---------CCC---CHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 24577889999977788999999988876655322111 111 2344444444443 3446888889999
Q ss_pred HHHHHHHHHHhc-CCeEeecCCeeEEEEecCCcHHHhh-----ceeecc-------cCCEEEEEEcCCCCHHHHHHHHHH
Q 011842 376 NAHYLKDRLLDA-GISAMLNELSSTVVFERPQDEEFVR-----RWQLAC-------QGNIAHVVVMPNVTIDKLDDFLNE 442 (476)
Q Consensus 376 ~a~~l~~~L~~~-g~~~~~~~~~~iv~f~~~~~~~~~~-----~~~l~~-------~~~~lRv~~~~~~T~edid~~~~~ 442 (476)
+++++.+.|++. |+. +.++..+++.+..++..++.+ ++.+.. ..+.+|++++ |++|+++++++
T Consensus 285 ~~~~l~~~l~~~~g~~-~~~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~iRis~~---~~~~i~~~~~~ 360 (367)
T 3euc_A 285 ERSRVAEGMAAHGGVT-VFPSAANFLLARVPDAAQTFDRLLARKVLIKNVSKMHPLLANCLRVTVS---TPEENAQFLEA 360 (367)
T ss_dssp HHHHHHHHHHTSTTCE-ECCCSSSEEEEECSCHHHHHHHHHTTTEECEECGGGCGGGTTEEEEECC---CHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCcE-ECCCCCeEEEEECCCHHHHHHHHHHCCeEEEECCccCCCCCCEEEEecC---CHHHHHHHHHH
Confidence 999999999998 554 555666677777764333322 233321 2478999975 99999999999
Q ss_pred HHHHH
Q 011842 443 LIENR 447 (476)
Q Consensus 443 l~~~~ 447 (476)
|+++.
T Consensus 361 l~~~l 365 (367)
T 3euc_A 361 FAASL 365 (367)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 98764
No 78
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=99.93 E-value=1.5e-24 Score=222.79 Aligned_cols=291 Identities=11% Similarity=-0.014 Sum_probs=212.2
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCc-ccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCC
Q 011842 136 HSRQFEVGVLDWFARLWELENNE-YWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCL 214 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~-~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~ 214 (476)
+..++++++.+++.+.+|.+.+. ..+++|+||++|+..++.++.. |++.|+++.++|.++...++..|++++.+|++
T Consensus 68 g~~~lr~~la~~~~~~~g~~~~~~~~i~~~~g~~~a~~~~~~~~~~--~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~ 145 (422)
T 3fvs_A 68 GYPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVD--EGDEVIIIEPFFDCYEPMTMMAGGRPVFVSLK 145 (422)
T ss_dssp CCHHHHHHHHHHHHHHHTCCCCHHHHEEEESHHHHHHHHHHHHHCC--TTCEEEEEESCCTTHHHHHHHTTCEEEEEECB
T ss_pred CCHHHHHHHHHHHHHhhCCCCCCCCcEEEECChHHHHHHHHHHHcC--CCCEEEEcCCCchhhHHHHHHcCCEEEEEecc
Confidence 34689999999999999987554 4799999999999999988755 89999999999999999999999999999987
Q ss_pred C----C--------CccCHHHHHHHHHcCCCCcEEEEEeeCCCcccccc---CHHHHHHHHHHhCCCCCceEEEEecCcc
Q 011842 215 I----S--------GEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVD---DLDLVIQTLEESGFTQDRFYIHCDGALF 279 (476)
Q Consensus 215 ~----~--------g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id---~l~~I~~ia~~~g~~~~~~~lhvD~a~~ 279 (476)
+ + +.+|+++|++++.+++ .+|++++++|++|.+. ++++|+++|++||+ ++++|++|+
T Consensus 146 ~~~~~~G~~~~~~~~~~d~~~l~~~~~~~~---~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~-----~li~De~~~ 217 (422)
T 3fvs_A 146 PGPIQNGELGSSSNWQLDPMELAGKFTSRT---KALVLNTPNNPLGKVFSREELELVASLCQQHDV-----VCITDEVYQ 217 (422)
T ss_dssp CCCCCSSSCCBGGGSBCCHHHHHTTCCTTE---EEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTC-----EEEEECTTT
T ss_pred cccccccccccccCCCCCHHHHHhhcCCCc---eEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCc-----EEEEEccch
Confidence 5 3 3689999999886543 4778889999999997 59999999999999 999999998
Q ss_pred cccccccccCCCCCCc--ccccEEEEcCCCCCC-CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHH
Q 011842 280 GLMMPFVKKAPKVSFK--KPIGSVSVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWY 356 (476)
Q Consensus 280 g~~~~~~~~~~~~~~~--~~~Dsi~~s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~ 356 (476)
.+.+......+..... ...+++..+++|+++ .++++|++++++++++.+....... ..+.+ .+.+++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~-------~~~~~---~~~~~a 287 (422)
T 3fvs_A 218 WMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKVGWVLGPDHIMKHLRTVHQNS-------VFHCP---TQSQAA 287 (422)
T ss_dssp TCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEECCHHHHHHHHHHHHTT-------TCCCC---HHHHHH
T ss_pred hhccCCCCCCChhhcccccCcEEEEecchhccCCccceEEEEEeCHHHHHHHHHHHhhc-------cCCCC---cHHHHH
Confidence 7655322221111111 124577788999987 6789999999988766553211110 11111 233333
Q ss_pred HHHHh---------ChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecCC----------------cHHH-
Q 011842 357 TLNRK---------GYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERPQ----------------DEEF- 410 (476)
Q Consensus 357 ~l~~~---------g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~----------------~~~~- 410 (476)
+...+ ..+.+++..++..++++++.+.|++.|+....+...+++.+..+. ..++
T Consensus 288 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (422)
T 3fvs_A 288 VAESFEREQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQSVGLKPIIPQGSYFLITDISDFKRKMPDLPGAVDEPYDRRFV 367 (422)
T ss_dssp HHHHHHHHHHTTTCTTCHHHHHHHHHHHHHHHHHHHHHTTTCEEEBCSBSSEEEEECHHHHHHCCCCCCCTTCCHHHHHH
T ss_pred HHHHHhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHcCCeecCCCeeeEEEEechhhcccccccccccccccHHHHH
Confidence 33332 234577888899999999999999998765555555555554321 1122
Q ss_pred ---hh--ceeec----c--------cCCEEEEEEcCCCCHHHHHHHHHHHHHHHH
Q 011842 411 ---VR--RWQLA----C--------QGNIAHVVVMPNVTIDKLDDFLNELIENRS 448 (476)
Q Consensus 411 ---~~--~~~l~----~--------~~~~lRv~~~~~~T~edid~~~~~l~~~~~ 448 (476)
.+ +..+. + ..+.+|+++.. |+++|+.+++.|+++.+
T Consensus 368 ~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~--~~e~i~~~l~~l~~~l~ 420 (422)
T 3fvs_A 368 KWMIKNKGLVAIPVSIFYSVPHQKHFDHYIRFCFVK--DEATLQAMDEKLRKWKV 420 (422)
T ss_dssp HHHHHHHCEECEEGGGGSCHHHHTTSCSEEEEECCC--CHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCEEEeCcHHhcCCcCCCCCCCeEEEEecC--CHHHHHHHHHHHHHHHh
Confidence 11 33221 1 24789998764 99999999999988764
No 79
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=99.93 E-value=1.8e-24 Score=219.18 Aligned_cols=289 Identities=13% Similarity=0.011 Sum_probs=203.6
Q ss_pred hHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCC--
Q 011842 137 SRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCL-- 214 (476)
Q Consensus 137 ~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~-- 214 (476)
..++++. ++++++.+++ .+++|+|||+|+..++.++.. +++.|++++++|.++...++..|++++.+|++
T Consensus 63 ~~~l~~~----la~~~~~~~~--~v~~~~g~~~a~~~~~~~~~~--~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~ 134 (381)
T 1v2d_A 63 LPALREA----LAEEFAVEPE--SVVVTSGATEALYVLLQSLVG--PGDEVVVLEPFFDVYLPDAFLAGAKARLVRLDLT 134 (381)
T ss_dssp CHHHHHH----HHHHHTSCGG--GEEEESSHHHHHHHHHHHHCC--TTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEE
T ss_pred CHHHHHH----HHHhcCCChh--hEEEcCChHHHHHHHHHHhCC--CCCEEEEcCCCchhHHHHHHHcCCEEEEEeCCCC
Confidence 3455555 5566787643 499999999999999988854 89999999999999999999999999999987
Q ss_pred -CCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCcccccccccccCC
Q 011842 215 -ISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAP 290 (476)
Q Consensus 215 -~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~ 290 (476)
+++.+|+++|++++.++ +.+|++++++|++|.+.| +++|+++|++||+ ++|+|++|+++.+ .....+
T Consensus 135 ~~~~~~d~~~l~~~l~~~---~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~-----~li~De~~~~~~~-g~~~~~ 205 (381)
T 1v2d_A 135 PEGFRLDLSALEKALTPR---TRALLLNTPMNPTGLVFGERELEAIARLARAHDL-----FLISDEVYDELYY-GERPRR 205 (381)
T ss_dssp TTEEECCHHHHHTTCCTT---EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTC-----EEEEECTTTTCBS-SSCCCC
T ss_pred CccCCcCHHHHHHhcCcC---CEEEEECCCCCCCCCccCHHHHHHHHHHHHHcCC-----EEEEEcCcccccc-CCCCCC
Confidence 56789999999988543 457888899999999865 8999999999999 9999999987654 111111
Q ss_pred CCCCcccccEEEEcCCCCCC-CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhC-hhcHHH
Q 011842 291 KVSFKKPIGSVSVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKG-YKGFQK 368 (476)
Q Consensus 291 ~~~~~~~~Dsi~~s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g-~~g~~~ 368 (476)
........|+++.++||+++ .++++|++++++++++.+.....+. ..+.+......+..+++... .+.+++
T Consensus 206 ~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~a~~~~l~~~~~~~~~~~ 278 (381)
T 1v2d_A 206 LREFAPERTFTVGSAGKRLEATGYRVGWIVGPKEFMPRLAGMRQWT-------SFSAPTPLQAGVAEALKLARREGFYEA 278 (381)
T ss_dssp HHHHCTTTEEEEEEHHHHTTCGGGCCEEEECCTTTHHHHHHHHHHH-------TSSCCHHHHHHHHHHHHHHHHTTHHHH
T ss_pred HHHhcCCCEEEEeechhhcCCcccceEEEEeCHHHHHHHHHHHhhc-------ccCCCcHHHHHHHHHHhCcccHHHHHH
Confidence 11111237899999999886 4577999999887765553222111 11111111222223333221 355788
Q ss_pred HHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecCCcH--HHh--hceeecc---------cCCEEEEEEcCCCCHHH
Q 011842 369 EVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERPQDE--EFV--RRWQLAC---------QGNIAHVVVMPNVTIDK 435 (476)
Q Consensus 369 ~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~~~--~~~--~~~~l~~---------~~~~lRv~~~~~~T~ed 435 (476)
..++..+++++|.+.|++.|+....++...++.+..+..+ ... +++.+.. ..+.+|+++.. |.++
T Consensus 279 ~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~iRi~~~~--~~~~ 356 (381)
T 1v2d_A 279 LREGYRRRRDLLAGGLRAMGLRVYVPEGTYFLMAELPGWDAFRLVEEARVALIPASAFYLEDPPKDLFRFAFCK--TEEE 356 (381)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCEECCSBSSEEEEECTTCCHHHHHHHTCEECEEGGGGCSSSCCTTEEEEECCS--CHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCEecCCCcceEEEEecChHhHHHHHHhCCEEEecchHhCCCCCCCCEEEEEeCC--CHHH
Confidence 8899999999999999998876554444556666665321 111 2333321 24689998875 9999
Q ss_pred HHHHHHHHHHHHHHHH
Q 011842 436 LDDFLNELIENRSTWY 451 (476)
Q Consensus 436 id~~~~~l~~~~~~~~ 451 (476)
|+.+++.|.++.+...
T Consensus 357 i~~~~~~l~~~l~~~r 372 (381)
T 1v2d_A 357 LHLALERLGRVVNSPR 372 (381)
T ss_dssp HHHHHHHHHHHC----
T ss_pred HHHHHHHHHHHHhhcc
Confidence 9999999998876543
No 80
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.93 E-value=7.2e-25 Score=219.33 Aligned_cols=288 Identities=14% Similarity=0.187 Sum_probs=203.6
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHH--HHHc--CCeEEEEeCC
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKA--ARMY--RMECVKVDCL 214 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~--~~~~--G~~v~~v~~~ 214 (476)
.+++++++++++++| + +..+++|+|||+|+..++.+++. |++.|+++.++|++.... +..+ |++++.+|.+
T Consensus 43 ~~~~~l~~~la~~~g-~--~~~v~~~~~gt~a~~~al~~~~~--~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 117 (356)
T 1v72_A 43 ELTAQVKRKFCEIFE-R--DVEVFLVPTGTAANALCLSAMTP--PWGNIYCHPASHINNDECGAPEFFSNGAKLMTVDGP 117 (356)
T ss_dssp HHHHHHHHHHHHHHT-S--CCEEEEESCHHHHHHHHHHTSCC--TTEEEEECTTSHHHHSSTTHHHHHTTSCEEEECCCG
T ss_pred hHHHHHHHHHHHHhC-C--CCcEEEeCCccHHHHHHHHHhcC--CCCEEEEcCccchhhhhchHHHHHhCCcEEEEecCC
Confidence 677888999999999 3 23479999999999999988765 899999999999998766 7777 9999999885
Q ss_pred CCCccCHHHHHH-HHHcC----CCCcEEEEEeeCCCcccc---ccCHHHHHHHHHHhCCCCCceEEEEecCcccccccc-
Q 011842 215 ISGEIDCADFKA-KLLQN----KDKPAIINVNIGTTVKGA---VDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPF- 285 (476)
Q Consensus 215 ~~g~~D~~~Le~-~l~~~----~~~p~~vv~t~gtt~tG~---id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~- 285 (476)
++.+|+++|++ ++.+. ..++.+|++++++ .+|. .+++++|+++|++||+ |+|+|++|+.+....
T Consensus 118 -~~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~~~-~tG~~~~~~~l~~i~~~~~~~~~-----~li~D~a~~~~~~~~~ 190 (356)
T 1v72_A 118 -AAKLDIVRLRERTREKVGDVHTTQPACVSITQAT-EVGSIYTLDEIEAIGDVCKSSSL-----GLHMDGSRFANALVSL 190 (356)
T ss_dssp -GGCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSC-TTSCCCCHHHHHHHHHHHHHTTC-----EEEEEETTHHHHHHHH
T ss_pred -CCeEcHHHHHHHhhhcchhhccCCceEEEEEcCC-CCCccCCHHHHHHHHHHHHHcCC-----eEEEEchhhHhHhccC
Confidence 57899999999 88752 1245678887765 4999 6779999999999999 999999997532211
Q ss_pred cccCCCCCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhc
Q 011842 286 VKKAPKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKG 365 (476)
Q Consensus 286 ~~~~~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g 365 (476)
......+.....+|++++++||+ +.|.++|+++.++++++.+.....+. ++......+.+..+++.+....
T Consensus 191 ~~~~~~~~~~~~~d~~~~s~sK~-g~~~G~g~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~l~~~~ 261 (356)
T 1v72_A 191 GCSPAEMTWKAGVDALSFGATKN-GVLAAEAIVLFNTSLATEMSYRRKRA--------GHLSSKMRFLSAQIDAYLTDDL 261 (356)
T ss_dssp TCCTTTTTGGGTCCEEEECCGGG-TCSSCEEEEESSGGGHHHHHHHHHHT--------TCCCSSTHHHHHHHHHHTSTTH
T ss_pred CCCHHHhhhhhcCCEEEEecccC-CCcCccEEEEECHHHHhhHHHHhhcc--------CchhhhHHHHHHHHHHHHHhhh
Confidence 11111111112478999999999 66877789988877665442111111 1101111233333455554444
Q ss_pred HHHHHHHHHHHHHHHHHHHHhc-CCeEeecCCeeEEEEecCCcHHHh-----hceeecc---cCCEEEEEEcCCCCHHHH
Q 011842 366 FQKEVQKCLRNAHYLKDRLLDA-GISAMLNELSSTVVFERPQDEEFV-----RRWQLAC---QGNIAHVVVMPNVTIDKL 436 (476)
Q Consensus 366 ~~~~~~~~~~~a~~l~~~L~~~-g~~~~~~~~~~iv~f~~~~~~~~~-----~~~~l~~---~~~~lRv~~~~~~T~edi 436 (476)
+.++.++..++++++.+.|++. |+....++.++++.+..+. ++. +++.+.. ..+.+|++++..+|++++
T Consensus 262 ~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~--~~~~~l~~~gi~v~~g~~~~~~iRi~~~~~~~~~~i 339 (356)
T 1v72_A 262 WLRNARKANAAAQRLAQGLEGLGGVEVLGGTEANILFCRLDS--AMIDALLKAGFGFYHDRWGPNVVRFVTSFATTAEDV 339 (356)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCTTEEEESCCCSSEEEEEECH--HHHHHHHHTTCBCBCSSSSTTEEEEECCTTCCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCcEEccCCCccEEEEEcCH--HHHHHHHhcCeEEeccccCCCeEEEEecCCCCHHHH
Confidence 6677888889999999999885 5544445556777776652 222 2233321 157899999999999999
Q ss_pred HHHHHHHHHHHHH
Q 011842 437 DDFLNELIENRST 449 (476)
Q Consensus 437 d~~~~~l~~~~~~ 449 (476)
++++++|+++.++
T Consensus 340 ~~~~~~l~~~l~~ 352 (356)
T 1v72_A 340 DHLLNQVRLAADR 352 (356)
T ss_dssp HHHHHHHHHTC--
T ss_pred HHHHHHHHHHHHh
Confidence 9999999887654
No 81
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=99.93 E-value=1e-24 Score=226.41 Aligned_cols=291 Identities=11% Similarity=0.017 Sum_probs=210.1
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCC
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLI 215 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~ 215 (476)
+..++++++.+++.+.+|.+.+...+++|+||++|+..++.++.+ |++.|+++++.|.++...++..|++++.+|+++
T Consensus 96 g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~G~~~al~~~~~~l~~--~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~ 173 (447)
T 3b46_A 96 GRPSLINSLIKLYSPIYNTELKAENVTVTTGANEGILSCLMGLLN--AGDEVIVFEPFFDQYIPNIELCGGKVVYVPINP 173 (447)
T ss_dssp CCHHHHHHHHHHHTTTTTSCCCGGGEEEESHHHHHHHHHHHHHCC--TTCEEEEEESCCTTHHHHHHHTTCEEEEEEEEC
T ss_pred CCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHHcC--CCCEEEEeCCCchhHHHHHHHcCCEEEEEeCCC
Confidence 457999999999998888764445799999999999999988865 899999999999999999999999999999864
Q ss_pred ------------CCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccc---cCHHHHHHHHHHhCCCCCceEEEEecCccc
Q 011842 216 ------------SGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAV---DDLDLVIQTLEESGFTQDRFYIHCDGALFG 280 (476)
Q Consensus 216 ------------~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~i---d~l~~I~~ia~~~g~~~~~~~lhvD~a~~g 280 (476)
++.+|+++|+++|.++ +.+|++++++|++|.+ +++++|+++|++||+ ++++|++|+.
T Consensus 174 ~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~-----~li~De~~~~ 245 (447)
T 3b46_A 174 PKELDQRNTRGEEWTIDFEQFEKAITSK---TKAVIINTPHNPIGKVFTREELTTLGNICVKHNV-----VIISDEVYEH 245 (447)
T ss_dssp CGGGGTSCBCSTTSEECHHHHHTTCCTT---EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTC-----EEEEECTTTT
T ss_pred ccccccccccccCcccCHHHHHHhhccC---CeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCc-----EEEEeccchh
Confidence 3579999999988643 4478888999999998 569999999999999 9999999987
Q ss_pred ccccccccCCCCCC---cccccEEEEcCCCCCC-CCCCceeEEe-ehhhhhhhcCCccccCCCCCcccCCCCChhHHHHH
Q 011842 281 LMMPFVKKAPKVSF---KKPIGSVSVSGHKFVG-CPMPCGVQIT-RMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLW 355 (476)
Q Consensus 281 ~~~~~~~~~~~~~~---~~~~Dsi~~s~hK~l~-~p~~~G~l~~-~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~ 355 (476)
+.+.. .+.+...+ ....+++..+++|+++ .++++|++++ ++++++.+.....+. ..+.+......+.
T Consensus 246 ~~~~g-~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~riG~~~~~~~~l~~~l~~~~~~~-------~~~~~~~~~~a~~ 317 (447)
T 3b46_A 246 LYFTD-SFTRIATLSPEIGQLTLTVGSAGKSFAATGWRIGWVLSLNAELLSYAAKAHTRI-------CFASPSPLQEACA 317 (447)
T ss_dssp CBCSS-CCCCGGGSCHHHHTTEEEEEEHHHHTTCTTSCCEEEECSCHHHHHHHHHHHHHH-------TSSCCHHHHHHHH
T ss_pred cccCC-CCcCHHHcCCCCCCcEEEEecCchhcCCcchhhEEEEeCCHHHHHHHHHHHhhc-------cCCCChHHHHHHH
Confidence 65532 22221222 1237889999999997 7889999999 777766553221111 1111212122222
Q ss_pred HHHHHhC-hhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecCC-----------------c-HHHh-----
Q 011842 356 YTLNRKG-YKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERPQ-----------------D-EEFV----- 411 (476)
Q Consensus 356 ~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~-----------------~-~~~~----- 411 (476)
.+++... ...+++..++..++++++.+.|++.|+....+.....+.+..+. + .++.
T Consensus 318 ~aL~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~ 397 (447)
T 3b46_A 318 NSINDALKIGYFEKMRQEYINKFKIFTSIFDELGLPYTAPEGTYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLIN 397 (447)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHTCCEECCSBSSEEEEECTTCCCCTTCCCCGGGSSSCHHHHHHHHHHH
T ss_pred HHHhCCcchHHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCeeEEEEEecccccCccccccccccccCCCHHHHHHHHHH
Confidence 3333221 23467788888999999999999988765544445556555432 1 1222
Q ss_pred -hceee-cc-----------cCCEEEEEEcCCCCHHHHHHHHHHHHHH
Q 011842 412 -RRWQL-AC-----------QGNIAHVVVMPNVTIDKLDDFLNELIEN 446 (476)
Q Consensus 412 -~~~~l-~~-----------~~~~lRv~~~~~~T~edid~~~~~l~~~ 446 (476)
++..+ +. ..+.+|+++. .++++|+..++.|.+.
T Consensus 398 ~~gV~v~pg~~f~~~~~~~~~~~~iRls~~--~~~e~l~~~~~~l~~~ 443 (447)
T 3b46_A 398 ELGVVAIPPTEFYIKEHEKAAENLLRFAVC--KDDAYLENAVERLKLL 443 (447)
T ss_dssp HTCEECBCGGGGSCGGGGGGGTTEEEEECC--SCHHHHHHHHHHGGGG
T ss_pred hCCEEEECchHhCCCCccCCCCCEEEEEEe--CCHHHHHHHHHHHHHH
Confidence 13333 11 1478999886 4899999999988763
No 82
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=99.93 E-value=1e-23 Score=211.33 Aligned_cols=280 Identities=13% Similarity=0.015 Sum_probs=208.0
Q ss_pred HHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccCH
Q 011842 142 VGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGEIDC 221 (476)
Q Consensus 142 ~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~ 221 (476)
.++++++++++|.+++ .+++|+|||+|+..++.+... +++.|+++.++|.++...++..|++++.+|.++++.+|+
T Consensus 54 ~~l~~~la~~~~~~~~--~i~~~~g~~~a~~~~~~~l~~--~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~ 129 (354)
T 3ly1_A 54 LMLGNKLAAHHQVEAP--SILLTAGSSEGIRAAIEAYAS--LEAQLVIPELTYGDGEHFAKIAGMKVTKVKMLDNWAFDI 129 (354)
T ss_dssp HHHHHHHHHHTTSCGG--GEEEESHHHHHHHHHHHHHCC--TTCEEEEESSSCTHHHHHHHHTTCEEEEECCCTTSCCCH
T ss_pred HHHHHHHHHHhCCChH--HEEEeCChHHHHHHHHHHHhC--CCCeEEECCCCchHHHHHHHHcCCEEEEecCCCCCCCCH
Confidence 4566778888887643 599999999999999988765 899999999999999999999999999999988899999
Q ss_pred HHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHH--hCCCCCceEEEEecCcccccccccccCCCCCC--cc-
Q 011842 222 ADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEE--SGFTQDRFYIHCDGALFGLMMPFVKKAPKVSF--KK- 296 (476)
Q Consensus 222 ~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~--~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~--~~- 296 (476)
++|++++.+. .++.+|++++++|++|.+.|++++.++++. ||+ ++++|++|+.+.... ...+.+.. ..
T Consensus 130 ~~l~~~l~~~-~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~-----~li~De~~~~~~~~~-~~~~~~~~~~~~~ 202 (354)
T 3ly1_A 130 EGLKAAVAAY-SGPSIVYLVNPNNPTGTITPADVIEPWIASKPANT-----MFIVDEAYAEFVNDP-RFRSISPMITQGA 202 (354)
T ss_dssp HHHHHHHHTC-SSCEEEEEESSCTTTCCCCCHHHHHHHHHTCCTTE-----EEEEECTTGGGCCCT-TCCCSHHHHHTTC
T ss_pred HHHHHHhccC-CCCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCe-----EEEEeccHHHhcccc-ccCCHHHHhhhcC
Confidence 9999999831 123478888999999999999888888887 888 999999998665432 11111111 01
Q ss_pred cccEEEEcCCCCCC-CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhCh-hcHHHHHHHHH
Q 011842 297 PIGSVSVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGY-KGFQKEVQKCL 374 (476)
Q Consensus 297 ~~Dsi~~s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~-~g~~~~~~~~~ 374 (476)
..++++.|+||+++ .++++|++++++++++.+.....+ ++. ..+.++++...+.. +.+++..++..
T Consensus 203 ~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~---------~~~---~~~~~~a~~~~l~~~~~~~~~~~~~~ 270 (354)
T 3ly1_A 203 ENIILLKTFSKIHAMAGMRVGYAVAHPTVIALMGRYVAG---------EKI---NFSGVDAALASMNDSAFITYSKKSND 270 (354)
T ss_dssp SSEEEEEESSSTTCCGGGCCEEEECCHHHHHHHGGGTTC---------SCC---CHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CCEEEEeeChhhccChhhhheeeecCHHHHHHHHHhcCC---------CCC---CHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 24578889999997 778999999988877665432221 111 23444455444432 45778888899
Q ss_pred HHHHHHHHHHHhcCCeEeecCCeeEEEEecCC-cHHHh-----hceeec----ccCCEEEEEEcCCCCHHHHHHHHHHHH
Q 011842 375 RNAHYLKDRLLDAGISAMLNELSSTVVFERPQ-DEEFV-----RRWQLA----CQGNIAHVVVMPNVTIDKLDDFLNELI 444 (476)
Q Consensus 375 ~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~-~~~~~-----~~~~l~----~~~~~lRv~~~~~~T~edid~~~~~l~ 444 (476)
++++++.+.|++.++... ++..+++.+..+. ..++. +++.+. ...+.+|++++ |++|+++++++|+
T Consensus 271 ~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~g~~~~~~~~iRis~~---~~~~i~~~~~~l~ 346 (354)
T 3ly1_A 271 VSRQILLKALEDLKLPYL-PSEGNFVFHQLVVPLKDYQTHMADAGVLIGRAFPPADNWCRISLG---TPQEMQWVADTMR 346 (354)
T ss_dssp HHHHHHHHHHHHHTCCBC-CCCSSEEEEECSSCHHHHHHHHHHTTEECCCCCTTCTTEEEEECC---CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCeEC-CCCceEEEEECCCCHHHHHHHHHHCCEEEeecCCCCCCEEEEEcC---CHHHHHHHHHHHH
Confidence 999999999998876543 4556667777663 23332 233333 13478999975 8999999999999
Q ss_pred HHHH
Q 011842 445 ENRS 448 (476)
Q Consensus 445 ~~~~ 448 (476)
++.+
T Consensus 347 ~~l~ 350 (354)
T 3ly1_A 347 EFRK 350 (354)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8765
No 83
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=99.92 E-value=1e-23 Score=212.33 Aligned_cols=276 Identities=10% Similarity=0.007 Sum_probs=202.2
Q ss_pred HHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeC-CCCCccCH
Q 011842 143 GVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDC-LISGEIDC 221 (476)
Q Consensus 143 ~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~-~~~g~~D~ 221 (476)
++++.+++++|+++ ..+++|+|+|+|+..++.+... |++.|+++.++|.++...++..|++++.+|+ ++++ +|+
T Consensus 69 ~lr~~la~~~~~~~--~~v~~~~g~~~a~~~~~~~l~~--~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~-~d~ 143 (365)
T 3get_A 69 ELKSTLAQKYKVQN--ENIIIGAGSDQVIEFAIHSKLN--SKNAFLQAGVTFAMYEIYAKQCGAKCYKTQSITHNL-DEF 143 (365)
T ss_dssp HHHHHHHHHHTCCG--GGEEEESSHHHHHHHHHHHHCC--TTCEEEECSSCCTHHHHHHHHHTCEEEECSSSSCCH-HHH
T ss_pred HHHHHHHHHhCCCc--ceEEECCCHHHHHHHHHHHHhC--CCCEEEEeCCChHHHHHHHHHcCCEEEEEecCCCCC-CCH
Confidence 44555667778764 3599999999999999888765 8999999999999999999999999999998 5678 999
Q ss_pred HHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHH--HhCCCCCceEEEEecCcccccc--cccccCCCCCC-c-
Q 011842 222 ADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLE--ESGFTQDRFYIHCDGALFGLMM--PFVKKAPKVSF-K- 295 (476)
Q Consensus 222 ~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~--~~g~~~~~~~lhvD~a~~g~~~--~~~~~~~~~~~-~- 295 (476)
++|++++.+++ .+|++++++|++|.+.|+++|.++++ ++|+ ++++|++|+.+.+ ......+.... .
T Consensus 144 ~~l~~~l~~~~---~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~-----~li~De~~~~~~~~~~~~~~~~~~~~~~~ 215 (365)
T 3get_A 144 KKLYETHKDEI---KLIFLCLPNNPLGECLDASEATEFIKGVNEDC-----LVVIDAAYNEFASFKDSKKHLEPCELIKE 215 (365)
T ss_dssp HHHHHHTTTTE---EEEEEESSCTTTCCCCCHHHHHHHHHTSCTTS-----EEEEECTTHHHHHHHCGGGCCCHHHHHHH
T ss_pred HHHHHHhCCCC---CEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCc-----EEEEeCccHHHhcccCCcccccHhHHhcc
Confidence 99999997544 47888899999999999999999988 6788 9999999986553 22111111111 1
Q ss_pred ccccEEEEcCCCCCC-CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhC-hhcHHHHHHHH
Q 011842 296 KPIGSVSVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKG-YKGFQKEVQKC 373 (476)
Q Consensus 296 ~~~Dsi~~s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g-~~g~~~~~~~~ 373 (476)
...++++.|+||+++ .++++|++++++++.+.+...... .+. ..+.++++...+. .+.+++..++.
T Consensus 216 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~---------~~~---~~~~~~~~~~~l~~~~~~~~~~~~~ 283 (365)
T 3get_A 216 FDNVLYLGTFSKLYGLGGLRIGYGIANANIISAFYKLRAP---------FNV---SNLALKAAVAAMDDDEFTEKTLENN 283 (365)
T ss_dssp CTTEEEEEESSSTTSCTTTCCEEEEECHHHHHHHHHHSCT---------TCS---CHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred CCCEEEEeecchHhcCcchheEEEEcCHHHHHHHHHhcCC---------CCc---CHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 124678889999986 778999999988776655322111 111 2344444444432 24578888899
Q ss_pred HHHHHHHHHHHHhcCCeEeecCCeeEEEEecCC--cHHHh-----hceeeccc----CCEEEEEEcCCCCHHHHHHHHHH
Q 011842 374 LRNAHYLKDRLLDAGISAMLNELSSTVVFERPQ--DEEFV-----RRWQLACQ----GNIAHVVVMPNVTIDKLDDFLNE 442 (476)
Q Consensus 374 ~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~--~~~~~-----~~~~l~~~----~~~lRv~~~~~~T~edid~~~~~ 442 (476)
.++++++.+.|++.|+.. .++..+++.+..+. ..++. +++.+... .+.+|+++. |++|+++++++
T Consensus 284 ~~~~~~l~~~l~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~iRis~~---~~~~i~~l~~~ 359 (365)
T 3get_A 284 FSQMELYKEFAKKHNIKI-IDSYTNFITYFFDEKNSTDLSEKLLKKGIIIRNLKSYGLNAIRITIG---TSYENEKFFTE 359 (365)
T ss_dssp HHHHHHHHHHHHHTTCEE-CCCSSSEEEEECSSSCHHHHHHHHHTTTEECEECGGGTCSEEEEECC---CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCEE-CCCCCeEEEEECCCCCHHHHHHHHHHCCEEEEECccCCCCEEEEEcC---CHHHHHHHHHH
Confidence 999999999999997653 45556667777664 23332 23333222 578999976 89999999999
Q ss_pred HHHHH
Q 011842 443 LIENR 447 (476)
Q Consensus 443 l~~~~ 447 (476)
|+++.
T Consensus 360 l~~~l 364 (365)
T 3get_A 360 FDKIL 364 (365)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 98764
No 84
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=99.92 E-value=4.7e-24 Score=217.52 Aligned_cols=287 Identities=11% Similarity=0.011 Sum_probs=202.3
Q ss_pred hHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCC
Q 011842 137 SRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLIS 216 (476)
Q Consensus 137 ~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~ 216 (476)
..++++++.+++ |.++ ..+++|+|+++|+..++.++.. +++.|+++.++|.++...++..|++++.+|.+++
T Consensus 76 ~~~l~~~la~~~----g~~~--~~v~~~~g~~~al~~~~~~~~~--~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~ 147 (397)
T 2zyj_A 76 YAPLRAFVAEWI----GVRP--EEVLITTGSQQALDLVGKVFLD--EGSPVLLEAPSYMGAIQAFRLQGPRFLTVPAGEE 147 (397)
T ss_dssp CHHHHHHHHHHH----TSCG--GGEEEESHHHHHHHHHHHHHCC--TTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETT
T ss_pred CHHHHHHHHHHh----CCCh--hhEEEeccHHHHHHHHHHHhCC--CCCEEEEeCCCcHHHHHHHHHcCCEEEecCcCCC
Confidence 456666655554 7653 3599999999999999888765 8899999999999999999999999999998765
Q ss_pred CccCHHHHHHHHHc-CCCCcEEE-EEeeCCCccccccCH---HHHHHHHHHhCCCCCceEEEEecCcccccccccccCCC
Q 011842 217 GEIDCADFKAKLLQ-NKDKPAII-NVNIGTTVKGAVDDL---DLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPK 291 (476)
Q Consensus 217 g~~D~~~Le~~l~~-~~~~p~~v-v~t~gtt~tG~id~l---~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~ 291 (476)
+ +|+++|++++++ +++ +| +++++.|++|.+.|. ++|+++|++||+ ++++|++|+.+.+......+.
T Consensus 148 ~-~d~~~l~~~l~~~~~~---~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~-----~li~De~~~~~~~~g~~~~~~ 218 (397)
T 2zyj_A 148 G-PDLDALEEVLKRERPR---FLYLIPSFQNPTGGLTPLPARKRLLQMVMERGL-----VVVEDDAYRELYFGEARLPSL 218 (397)
T ss_dssp E-ECHHHHHHHHHHCCCS---CEEECCBSCTTTCCBCCHHHHHHHHHHHHHHTC-----CEEEECTTTTCBCSSCCCCCH
T ss_pred C-CCHHHHHHHHhhcCCe---EEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCC-----EEEEeCCcccccCCCCCCCch
Confidence 5 999999999986 443 44 567889999998764 599999999999 999999998765432111110
Q ss_pred CCCc-c---cccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhCh---h
Q 011842 292 VSFK-K---PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGY---K 364 (476)
Q Consensus 292 ~~~~-~---~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~---~ 364 (476)
.... . ...++..++||+++.++++|++++++++++.+.....+. ..+. ..+.++++...+.. +
T Consensus 219 ~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~~~~~~~l~~~~~~~-------~~~~---~~~~~~a~~~~l~~~~~~ 288 (397)
T 2zyj_A 219 FELAREAGYPGVIYLGSFSKVLSPGLRVAFAVAHPEALQKLVQAKQGA-------DLHT---PMLNQMLVHELLKEGFSE 288 (397)
T ss_dssp HHHHHHHTCCCEEEEEESTTTTCGGGCCEEEECCHHHHHHHHHHHHHH-------HSSC---CHHHHHHHHHHHTTTHHH
T ss_pred hhhCcccCCCeEEEEecccccccccceeEEEecCHHHHHHHHHHHHhh-------cCCC---CHHHHHHHHHHHHhCCHH
Confidence 1110 1 123778899999996689999999987766553211111 1111 13444444444432 3
Q ss_pred cHHHHHHHHHHHHHHHHHHHHhc---CCeEeecCCeeEEEEecCC---cHHHh-----hceeec----c-----cCCEEE
Q 011842 365 GFQKEVQKCLRNAHYLKDRLLDA---GISAMLNELSSTVVFERPQ---DEEFV-----RRWQLA----C-----QGNIAH 424 (476)
Q Consensus 365 g~~~~~~~~~~~a~~l~~~L~~~---g~~~~~~~~~~iv~f~~~~---~~~~~-----~~~~l~----~-----~~~~lR 424 (476)
.+++..++..++++++.+.|++. |+....+..++++.+..+. ..++. +++.+. . ..+.+|
T Consensus 289 ~~~~~~~~~~~~~~~l~~~L~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~f~~~~~~~~~iR 368 (397)
T 2zyj_A 289 RLERVRRVYREKAQAMLHALDREVPKEVRYTRPKGGMFVWMELPKGLSAEGLFRRALEENVAFVPGGPFFANGGGENTLR 368 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCTTSEECCCSBSSEEEEECSTTCCHHHHHHHHHHTTEEEEESGGGCTTSCCTTEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCeEEccCCccEEEEEEcCCCCCHHHHHHHHHHCCCEEechHHhcCCCCCCCeEE
Confidence 46677778888999999999885 5544444445667677653 22232 233332 1 247899
Q ss_pred EEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 011842 425 VVVMPNVTIDKLDDFLNELIENRSTWY 451 (476)
Q Consensus 425 v~~~~~~T~edid~~~~~l~~~~~~~~ 451 (476)
+++... |+++|+++++.|.++.+++.
T Consensus 369 is~~~~-~~~~i~~~~~~l~~~l~~~~ 394 (397)
T 2zyj_A 369 LSYATL-DREGIAEGVRRLGRALKGLL 394 (397)
T ss_dssp EECSSS-CHHHHHHHHHHHHHHHHHHH
T ss_pred EEcCCC-CHHHHHHHHHHHHHHHHHHH
Confidence 998764 99999999999999887765
No 85
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=99.92 E-value=1.4e-23 Score=216.62 Aligned_cols=294 Identities=14% Similarity=0.013 Sum_probs=203.9
Q ss_pred hHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCC-
Q 011842 137 SRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLI- 215 (476)
Q Consensus 137 ~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~- 215 (476)
..++++++.+++.+. |.+.+...+++|+|||+|+..++.++.. |++.|+++.++|.++...++..|++++.+|.++
T Consensus 98 ~~~lr~~la~~~~~~-~~~~~~~~v~~t~g~t~al~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~ 174 (427)
T 3dyd_A 98 FLSSREEIASYYHCP-EAPLEAKDVILTSGCSQAIDLCLAVLAN--PGQNILVPRPGFSLYKTLAESMGIEVKLYNLLPE 174 (427)
T ss_dssp CHHHHHHHHHHHCBT-TBCCCGGGEEEESSHHHHHHHHHHHHCC--TTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGG
T ss_pred cHHHHHHHHHHHhhc-CCCCChHHEEEecCcHHHHHHHHHHhcC--CCCEEEEcCCCchhHHHHHHHcCCEEEEEecccc
Confidence 347777766665443 4333345699999999999999988865 899999999999999999999999999999863
Q ss_pred -CCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCC
Q 011842 216 -SGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPK 291 (476)
Q Consensus 216 -~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~ 291 (476)
++.+|+++|++++.+++ .+|++++++|++|.+.| +++|+++|++||+ ++++|++|+++........+.
T Consensus 175 ~~~~~d~~~l~~~l~~~~---~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~-----~~i~Deay~~~~~~g~~~~~~ 246 (427)
T 3dyd_A 175 KSWEIDLKQLEYLIDEKT---ACLIVNNPSNPCGSVFSKRHLQKILAVAARQCV-----PILADEIYGDMVFSDCKYEPL 246 (427)
T ss_dssp GTTEECHHHHHSSCCTTE---EEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTC-----CEEEECTTTTCBCSSCCCCCG
T ss_pred cCCCCCHHHHHHHhccCC---CEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCC-----EEEEEcCchhhccCCCcCccH
Confidence 56799999999886543 47788899999999999 9999999999999 999999998765432111111
Q ss_pred CCCccccc-EEEEcCCCC-CCCCCCceeEEeeh-------hhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhC
Q 011842 292 VSFKKPIG-SVSVSGHKF-VGCPMPCGVQITRM-------EHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKG 362 (476)
Q Consensus 292 ~~~~~~~D-si~~s~hK~-l~~p~~~G~l~~~~-------~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g 362 (476)
.......+ +++.|++|. ++.++++|++++++ ++.+.+...... ..+.+......+..+++...
T Consensus 247 ~~~~~~~~vi~~~S~sK~~~~~G~riG~~~~~~~~~~~~~~i~~~l~~~~~~--------~~~~~~~~~~a~~~~L~~~~ 318 (427)
T 3dyd_A 247 ATLSTDVPILSCGGLAKRWLVPGWRLGWILIHDRRDIFGNEIRDGLVKLSQR--------ILGPCTIVQGALKSILCRTP 318 (427)
T ss_dssp GGGCSSCCEEEEEESTTTSSCGGGCCEEEEEECSTTSSHHHHHHHHHHHHHH--------HCCSCHHHHHHHHHHHHHSC
T ss_pred HHhCCCCcEEEEeeccccCCCcCcceEEEEecCcchhhHHHHHHHHHHHHhc--------cCCCCHHHHHHHHHHHHhcC
Confidence 11111222 456799996 56678899999985 233333211100 11122122233333444334
Q ss_pred hhcHHHHHHHHHHHHHHHHHHHHhc-CCeEeecCCeeEEEEecC--------CcHHHh------hceeecc-----cCCE
Q 011842 363 YKGFQKEVQKCLRNAHYLKDRLLDA-GISAMLNELSSTVVFERP--------QDEEFV------RRWQLAC-----QGNI 422 (476)
Q Consensus 363 ~~g~~~~~~~~~~~a~~l~~~L~~~-g~~~~~~~~~~iv~f~~~--------~~~~~~------~~~~l~~-----~~~~ 422 (476)
.+.+++..++..++++++.+.|++. ++....+...+.+.+..+ ...++. ++..+.. ..++
T Consensus 319 ~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~l~~~~gV~v~~g~~~~~~~~ 398 (427)
T 3dyd_A 319 GEFYHNTLSFLKSNADLCYGALAAIPGLRPVRPSGAMYLMVGIEMEHFPEFENDVEFTERLVAEQSVHCLPATCFEYPNF 398 (427)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSTTEEEECCSBTTEEEEEECGGGCTTCSSHHHHHHHHHHHHCEECEEGGGGTCTTE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCeeEEEEEecCHhhcCCCCCHHHHHHHHHHHCCEEEECCcccCCCCe
Confidence 5667888899999999999999998 443333444555555443 122222 2222321 2478
Q ss_pred EEEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 011842 423 AHVVVMPNVTIDKLDDFLNELIENRSTWY 451 (476)
Q Consensus 423 lRv~~~~~~T~edid~~~~~l~~~~~~~~ 451 (476)
+|+++. +++++|+.+++.|.++.+++.
T Consensus 399 iRis~~--~~~e~i~~~l~~l~~~l~~~~ 425 (427)
T 3dyd_A 399 IRVVIT--VPEVMMLEACSRIQEFCEQHY 425 (427)
T ss_dssp EEEESC--SCHHHHHHHHHHHHHHHHHHC
T ss_pred EEEEEC--CCHHHHHHHHHHHHHHHHHhh
Confidence 999875 799999999999999887654
No 86
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=99.92 E-value=6e-24 Score=214.72 Aligned_cols=284 Identities=11% Similarity=-0.029 Sum_probs=206.6
Q ss_pred hHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCC--CcEEEecCCCchHHHHHHHHcCCeEEEEeCC
Q 011842 137 SRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFP--DGILYASRESHYSVFKAARMYRMECVKVDCL 214 (476)
Q Consensus 137 ~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p--~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~ 214 (476)
..++++++.+++.+.+|.+.+...+++|+|+|+++..++.++.. + ++.|+++.++|.++...++..|++++.+|.+
T Consensus 61 ~~~lr~~la~~l~~~~g~~~~~~~i~~t~g~~~al~~~~~~~~~--~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~ 138 (376)
T 3ezs_A 61 EESLRAAQRGFFKRRFKIELKENELISTLGSREVLFNFPSFVLF--DYQNPTIAYPNPFYQIYEGAAKFIKAKSLLMPLT 138 (376)
T ss_dssp CHHHHHHHHHHHHHHHSCCCCGGGEEEESSSHHHHHHHHHHHTT--TCSSCEEEEEESCCTHHHHHHHHTTCEEEEEECC
T ss_pred CHHHHHHHHHHHHHHhCCCCCHHHEEECcCcHHHHHHHHHHHcC--CCCCCEEEEecCCcHhHHHHHHHcCCEEEEcccC
Confidence 46999999999999999854445699999999999999988876 7 8999999999999999999999999999998
Q ss_pred CCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCC
Q 011842 215 ISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPK 291 (476)
Q Consensus 215 ~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~ 291 (476)
+++.+++ +|++++.++++ +|++++++|++|.+.| +++|+++|++||+ ++++|++|+.+.... ...+.
T Consensus 139 ~~~~~~~-~l~~~~~~~~~---~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~-----~li~De~~~~~~~~~-~~~~~ 208 (376)
T 3ezs_A 139 KENDFTP-SLNEKELQEVD---LVILNSPNNPTGRTLSLEELISWVKLALKHDF-----ILINDECYSEIYENT-PPPSL 208 (376)
T ss_dssp GGGTSCC-CCCHHHHHHCS---EEEECSSCTTTCCCCCHHHHHHHHHHHHHHTC-----EEEEECTTTTCBSSS-CCCCH
T ss_pred CCCCcch-hHHhhhccCCC---EEEEcCCCCCcCCCCCHHHHHHHHHHHHHcCc-----EEEEEccchhhccCC-CCCCH
Confidence 7656666 78888876554 7777889999999966 7788888999999 999999998765432 11111
Q ss_pred CCC-------cccccEEEEcCCCCCC-CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhC-
Q 011842 292 VSF-------KKPIGSVSVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKG- 362 (476)
Q Consensus 292 ~~~-------~~~~Dsi~~s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g- 362 (476)
... ....+++..+++|+++ .++++|+++.++++++.+.....+. ..+. ..+.++++...+.
T Consensus 209 ~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~-------~~~~---~~~~~~a~~~~l~~ 278 (376)
T 3ezs_A 209 LEACMLAGNEAFKNVLVIHSLSKRSSAPGLRSGFIAGDSRLLEKYKAFRAYL-------GYTS---ANAIQKASEAAWLD 278 (376)
T ss_dssp HHHHHHTTCTTCTTEEEEEESTTTTTCGGGCCEEEEECHHHHHHHHHHHTTT-------CCCC---CHHHHHHHHHHHHC
T ss_pred HHccccccccccCcEEEEecchhccCCccceeEEEeeCHHHHHHHHHHHhhh-------cCCC---ChHHHHHHHHHHhC
Confidence 111 1235688899999995 7789999999887766553221111 1111 1333444333332
Q ss_pred hhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecCCcHHHh------hceeec---------ccCCEEEEEE
Q 011842 363 YKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERPQDEEFV------RRWQLA---------CQGNIAHVVV 427 (476)
Q Consensus 363 ~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~~~~~~------~~~~l~---------~~~~~lRv~~ 427 (476)
.+.+++..++..++++++.+.|+ ++. .+...+++.+..++..++. +++.+. ...+.+|+++
T Consensus 279 ~~~~~~~~~~~~~~~~~l~~~l~--~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~ 354 (376)
T 3ezs_A 279 DRHAEFFRNIYANNLKLARKIFK--NTL--IYPYSFYVYLPVQNGENFAKTLYQNEGIITLPALYLGRNRIGADYVRLAL 354 (376)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHST--TCC--CCSBSSEEEEECSCHHHHHHHHHHHHCCBCEEGGGGCSTTTTTTEEEEEC
T ss_pred cHHHHHHHHHHHHHHHHHHHHhc--CCC--CCCcceEEEEECCCHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCeEEEEE
Confidence 33467788888889999998887 543 3444566666666433322 233332 1347899987
Q ss_pred cCCCCHHHHHHHHHHHHHHHH
Q 011842 428 MPNVTIDKLDDFLNELIENRS 448 (476)
Q Consensus 428 ~~~~T~edid~~~~~l~~~~~ 448 (476)
+ .|+++|++++++|.++.+
T Consensus 355 ~--~~~~~i~~~l~~l~~~l~ 373 (376)
T 3ezs_A 355 V--YDTPLLEKPLEIIETYRE 373 (376)
T ss_dssp C--SCHHHHHHHHHHHHHHHC
T ss_pred c--CCHHHHHHHHHHHHHHHH
Confidence 6 399999999999988764
No 87
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.92 E-value=3e-24 Score=218.99 Aligned_cols=286 Identities=11% Similarity=0.091 Sum_probs=202.3
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCc
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGE 218 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~ 218 (476)
....++++.+++++|.+ + .+++++||+|+..++.++.. |++.|+++.+.|.++..+++..|++++.++.
T Consensus 90 ~~~~~l~~~la~~~g~~-~---~i~~~sGs~a~~~~~~~~~~--~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~----- 158 (401)
T 1fc4_A 90 DSHKELEQKLAAFLGME-D---AILYSSCFDANGGLFETLLG--AEDAIISDALNHASIIDGVRLCKAKRYRYAN----- 158 (401)
T ss_dssp HHHHHHHHHHHHHHTCS-E---EEEESCHHHHHHTTHHHHCC--TTCEEEEETTCCHHHHHHHHTSCSEEEEECT-----
T ss_pred HHHHHHHHHHHHHhCCC-c---EEEeCChHHHHHHHHHHHcC--CCCEEEEcchhHHHHHHHHHHcCCceEEECC-----
Confidence 44556667778888886 2 56677789999988887754 8999999999999999999999999998884
Q ss_pred cCHHHHHHHHHcCCC---CcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcc-cccccccccC-CCCC
Q 011842 219 IDCADFKAKLLQNKD---KPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALF-GLMMPFVKKA-PKVS 293 (476)
Q Consensus 219 ~D~~~Le~~l~~~~~---~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~-g~~~~~~~~~-~~~~ 293 (476)
+|+++|++++.+... ++.+|++++++|++|.+.|+++|.++|++||+ ++++|++|+ ++..+..... ..++
T Consensus 159 ~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~-----~li~De~~~~g~~~~~g~~~~~~~~ 233 (401)
T 1fc4_A 159 NDMQELEARLKEAREAGARHVLIATDGVFSMDGVIANLKGVCDLADKYDA-----LVMVDDSHAVGFVGENGRGSHEYCD 233 (401)
T ss_dssp TCHHHHHHHHHHHHHTTCSSEEEEEESEETTTTEECCHHHHHHHHHHTTE-----EEEEECTTTTTTSSTTSCCHHHHTT
T ss_pred CCHHHHHHHHHHhhccCCCceEEEEeCCcCCCCCCCCHHHHHHHHHHcCC-----EEEEECcccccccCCCCCccHHHcC
Confidence 489999999975211 34588888999999999999999999999999 999999996 5443211110 0122
Q ss_pred CcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCc-cccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHHH
Q 011842 294 FKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNV-EYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQK 372 (476)
Q Consensus 294 ~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~-~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~ 372 (476)
.....|+++.++||+++++.+ |++++++++++.+.... .|. ..++.+......+..+++.+. ..++..++
T Consensus 234 ~~~~~di~~~s~sK~~~~~~g-G~~~~~~~~~~~l~~~~~~~~------~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~ 304 (401)
T 1fc4_A 234 VMGRVDIITGTLGKALGGASG-GYTAARKEVVEWLRQRSRPYL------FSNSLAPAIVAASIKVLEMVE--AGSELRDR 304 (401)
T ss_dssp CTTCCSEEEEESSSTTCSSSC-EEEEECHHHHHHHHHHCHHHH------HSCCCCHHHHHHHHHHHHHHH--TCHHHHHH
T ss_pred CCcCCcEEEecchhhccCCCC-EEEEcCHHHHHHHHHhCcCce------eCCCCCHHHHHHHHHHHHHHh--cCHHHHHH
Confidence 222479999999999965665 99999887766553211 121 111222122222333333331 14677888
Q ss_pred HHHHHHHHHHHHHhcCCeEeecCCeeEEEEecCC---cHHHh-----hceeecc--------cCCEEEEEEcCCCCHHHH
Q 011842 373 CLRNAHYLKDRLLDAGISAMLNELSSTVVFERPQ---DEEFV-----RRWQLAC--------QGNIAHVVVMPNVTIDKL 436 (476)
Q Consensus 373 ~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~---~~~~~-----~~~~l~~--------~~~~lRv~~~~~~T~edi 436 (476)
..++++++.+.|++.|+... ++..+++.+..+. ..++. +++.+.. ..+.+|++++..+|++++
T Consensus 305 ~~~~~~~l~~~L~~~g~~~~-~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i 383 (401)
T 1fc4_A 305 LWANARQFREQMSAAGFTLA-GADHAIIPVMLGDAVVAQKFARELQKEGIYVTGFFYPVVPKGQARIRTQMSAAHTPEQI 383 (401)
T ss_dssp HHHHHHHHHHHHHHTTCCBC-CSSSSEEEEEEECHHHHHHHHHHHHHTTEECCEECTTSSCTTCEEEEEECCTTCCHHHH
T ss_pred HHHHHHHHHHHHHHcCCccc-CCCCCEEEEEcCChHHHHHHHHHHHHCCcEEeeecCCCCCCCCceEEEEeCCCCCHHHH
Confidence 89999999999999876544 4556677776653 12222 2333321 135799999999999999
Q ss_pred HHHHHHHHHHHHHH
Q 011842 437 DDFLNELIENRSTW 450 (476)
Q Consensus 437 d~~~~~l~~~~~~~ 450 (476)
++++++|+++.+++
T Consensus 384 ~~~~~~l~~~~~~~ 397 (401)
T 1fc4_A 384 TRAVEAFTRIGKQL 397 (401)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999987754
No 88
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=99.92 E-value=7.5e-24 Score=216.54 Aligned_cols=290 Identities=9% Similarity=-0.023 Sum_probs=206.9
Q ss_pred hHHHHHHHHHHHHHHcCCCCCc-ccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCC-
Q 011842 137 SRQFEVGVLDWFARLWELENNE-YWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCL- 214 (476)
Q Consensus 137 ~~~le~~~~~~la~l~g~~~~~-~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~- 214 (476)
..++++++.+++.+.+|.+.+. ..+++|+||++|+..++.++.. +++.|+++.++|.++...++..|++++.++++
T Consensus 63 ~~~l~~~la~~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~~~--~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~ 140 (410)
T 3e2y_A 63 HPALVKALSCLYGKIYQRQIDPNEEILVAVGAYGSLFNSIQGLVD--PGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRS 140 (410)
T ss_dssp CHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHHHCC--TTCEEEEEESCCTTHHHHHHHTTCEEEEEECEE
T ss_pred hHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHHHHHHhcC--CCCEEEEeCCCchhhHHHHHHcCCEEEEEeccc
Confidence 3589999999999988876544 5699999999999999988865 89999999999999999999999999999886
Q ss_pred ----------CCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccc---cCHHHHHHHHHHhCCCCCceEEEEecCcccc
Q 011842 215 ----------ISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAV---DDLDLVIQTLEESGFTQDRFYIHCDGALFGL 281 (476)
Q Consensus 215 ----------~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~i---d~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~ 281 (476)
.++.+|+++|++++.++ +.+|++++++|++|.+ +++++|+++|++||+ ++++|++|+.+
T Consensus 141 ~~~~g~~~~~~~~~~d~~~l~~~~~~~---~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~-----~li~De~~~~~ 212 (410)
T 3e2y_A 141 KPTDGMKWTSSDWTFDPRELESKFSSK---TKAIILNTPHNPLGKVYTRQELQVIADLCVKHDT-----LCISDEVYEWL 212 (410)
T ss_dssp CCCCSSCCBGGGEECCHHHHHTTCCTT---EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTC-----EEEEECTTTTC
T ss_pred cccccccccccCCcCCHHHHHhhcCCC---ceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCc-----EEEEEhhhhhc
Confidence 24568999999988643 3478888999999999 689999999999999 99999999876
Q ss_pred cccccccCCCCCCc--ccccEEEEcCCCCCC-CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHH
Q 011842 282 MMPFVKKAPKVSFK--KPIGSVSVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTL 358 (476)
Q Consensus 282 ~~~~~~~~~~~~~~--~~~Dsi~~s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l 358 (476)
.+......+..... ...+++..+++|+++ .++++|++++++++++.+.....+. ..+.+......+..++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~a~~~~l 285 (410)
T 3e2y_A 213 VYTGHTHVKIATLPGMWERTITIGSAGKTFSVTGWKLGWSIGPAHLIKHLQTVQQNS-------FYTCATPLQAALAEAF 285 (410)
T ss_dssp BCTTCCCCCGGGSTTCGGGEEEEEEHHHHSSCGGGCCEEEECCHHHHHHHHHHHHTT-------TCCCCHHHHHHHHHHH
T ss_pred ccCCCCCCCHHHcCCccCeEEEEecchhhcCCCCceEEEEEECHHHHHHHHHHHHhh-------ccCCChHHHHHHHHHH
Confidence 55322221111111 124577788899887 7789999999988766553211110 1111112222222333
Q ss_pred HH------hChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecCC--c------------HHH----h--h
Q 011842 359 NR------KGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERPQ--D------------EEF----V--R 412 (476)
Q Consensus 359 ~~------~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~--~------------~~~----~--~ 412 (476)
.. .....+++..++..++++++.+.|++.|+....+....++.+..+. . .++ . +
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 365 (410)
T 3e2y_A 286 WIDIKRMDDPECYFNSLPKELEVKRDRMVRLLNSVGLKPIVPDGGYFIIADVSSLGADLSDMNSDEPYDYKFVKWMTKHK 365 (410)
T ss_dssp HHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHTTTCEEEBCSBSSEEEEECGGGCCCCTTCCSSCCHHHHHHHHHHHHH
T ss_pred HhhhccccchHHHHHHHHHHHHHHHHHHHHHHHHCCCeecCCCccEEEEEEchhhhcccccccccccCHHHHHHHHHHHc
Confidence 31 1234577888888999999999999998765555555555544321 0 122 1 1
Q ss_pred ceeec----c--------cCCEEEEEEcCCCCHHHHHHHHHHHHH
Q 011842 413 RWQLA----C--------QGNIAHVVVMPNVTIDKLDDFLNELIE 445 (476)
Q Consensus 413 ~~~l~----~--------~~~~lRv~~~~~~T~edid~~~~~l~~ 445 (476)
+..+. + ..+.+|+++.. |+++|+++++.|++
T Consensus 366 gv~v~~g~~f~~~~~~~~~~~~iRis~~~--~~e~l~~~l~~l~~ 408 (410)
T 3e2y_A 366 KLTAIPVSAFCDSKSKPHFEKLVRFCFIK--KDSTLDAAEEIFRA 408 (410)
T ss_dssp SEECEEGGGGSCTTTHHHHTTEEEEECCC--CHHHHHHHHHHHHT
T ss_pred CEEEeCchhhCCCCCCCCCCCEEEEEEcC--CHHHHHHHHHHHHh
Confidence 33331 1 13789998754 99999999998864
No 89
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=99.92 E-value=2.2e-23 Score=211.43 Aligned_cols=290 Identities=11% Similarity=0.076 Sum_probs=205.9
Q ss_pred hHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCC--
Q 011842 137 SRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCL-- 214 (476)
Q Consensus 137 ~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~-- 214 (476)
..++++++++++++++|.+.+...+++|+|||+|+..++.++.. +++.|+++.++|.++...++..|++++.+|++
T Consensus 69 ~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~--~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 146 (391)
T 4dq6_A 69 PDSYNESIVNWLYRRHNWKIKSEWLIYSPGVIPAISLLINELTK--ANDKIMIQEPVYSPFNSVVKNNNRELIISPLQKL 146 (391)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSC--TTCEEEECSSCCTHHHHHHHHTTCEEEECCCEEC
T ss_pred CHHHHHHHHHHHHHHhCCCCcHHHeEEcCChHHHHHHHHHHhCC--CCCEEEEcCCCCHHHHHHHHHcCCeEEeeeeeec
Confidence 46899999999999999553445699999999999999988865 89999999999999999999999999999987
Q ss_pred CC--CccCHHHHHHHHHcCCCCcEEEEEeeCCCccccc---cCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccC
Q 011842 215 IS--GEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAV---DDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKA 289 (476)
Q Consensus 215 ~~--g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~i---d~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~ 289 (476)
.+ +.+|+++|++++++ +.+|+++++++++|.+ +++++|+++|++||+ ++++|++|+++........
T Consensus 147 ~~~~~~~d~~~l~~~l~~----~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~-----~li~De~~~~~~~~g~~~~ 217 (391)
T 4dq6_A 147 ENGNYIMDYEDIENKIKD----VKLFILCNPHNPVGRVWTKDELKKLGDICLKHNV-----KIISDEIHSDIILKKHKHI 217 (391)
T ss_dssp TTSCEECCHHHHHHHCTT----EEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTC-----EEEEECTTTTCBCTTCCCC
T ss_pred CCCceEeeHHHHHHHhhc----CCEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCC-----EEEeeccccccccCCCCcc
Confidence 33 45999999999976 3478888999999999 779999999999999 9999999987654322111
Q ss_pred CCCCCcc---cccEEEEcCCCCCC-CCCCceeEEeeh-hhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChh
Q 011842 290 PKVSFKK---PIGSVSVSGHKFVG-CPMPCGVQITRM-EHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYK 364 (476)
Q Consensus 290 ~~~~~~~---~~Dsi~~s~hK~l~-~p~~~G~l~~~~-~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~ 364 (476)
+...... ...++..++||+++ .++++|++++++ ++.+.+........ .++.+......+.+++.. ..+
T Consensus 218 ~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~a~~~~l~~-~~~ 290 (391)
T 4dq6_A 218 PMASISKEFEKNTITCMAPTKTFNIAGLQSSYVVLPDEKDYKLLDDAFTRID------IKRNNCFSLVATEASYNN-GES 290 (391)
T ss_dssp CGGGSCHHHHHTEEEEECSHHHHTCGGGCCEEEECCSHHHHHHHHHHHHHTT------CCCCCHHHHHHHHHHHHH-CHH
T ss_pred CHHHcCccccCcEEEEEechhhccCcccceEEEEeCCHHHHHHHHHHHHhhc------CCCCCHHHHHHHHHHHhc-hHH
Confidence 1111111 13377889999986 678999999987 55554422111100 111211122222233332 234
Q ss_pred cHHHHHHHHHHHHHHHHHHHHh-c-CCeEeecCCeeE-EEEecCC----cHHH----h-h-ceeecc-------cCCEEE
Q 011842 365 GFQKEVQKCLRNAHYLKDRLLD-A-GISAMLNELSST-VVFERPQ----DEEF----V-R-RWQLAC-------QGNIAH 424 (476)
Q Consensus 365 g~~~~~~~~~~~a~~l~~~L~~-~-g~~~~~~~~~~i-v~f~~~~----~~~~----~-~-~~~l~~-------~~~~lR 424 (476)
.+++..++..++++++.+.|++ . ++. +.++..+. +.+..+. ..++ . + ++.+.. ..+.+|
T Consensus 291 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iR 369 (391)
T 4dq6_A 291 WLESFLEYLESNIDFAIKYINENMPKLK-VRKPEGTYLLWVDFSALGLSDEELESILVQKGKVALNQGNSFGIGGSGYQR 369 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCTTSE-ECCCSBSSEEEEECGGGCCCHHHHHHHHHHTTCEECEEGGGGCTTCTTEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCCE-ecCCCccEEEEEEhhhcCCCHHHHHHHHHHhCCEEeeCchhhCCCCCCeEE
Confidence 4777888899999999999988 4 544 44444433 3355442 2222 2 2 343321 237899
Q ss_pred EEEcCCCCHHHHHHHHHHHHHHH
Q 011842 425 VVVMPNVTIDKLDDFLNELIENR 447 (476)
Q Consensus 425 v~~~~~~T~edid~~~~~l~~~~ 447 (476)
++++ +++++|+.+++.|+++.
T Consensus 370 is~~--~~~~~i~~~l~~l~~~l 390 (391)
T 4dq6_A 370 INLA--CPRSMLEEALIRIKNAI 390 (391)
T ss_dssp EECC--SCHHHHHHHHHHHHHHH
T ss_pred EEEc--CCHHHHHHHHHHHHHHh
Confidence 9887 79999999999998764
No 90
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=99.92 E-value=2.8e-23 Score=210.01 Aligned_cols=288 Identities=9% Similarity=0.018 Sum_probs=204.0
Q ss_pred HHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCC-
Q 011842 138 RQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLIS- 216 (476)
Q Consensus 138 ~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~- 216 (476)
.++++++++++++.+|.+.+...+++|+|||+|+..++.++.. +++.|+++.++|.++...++..|++++.+|.+++
T Consensus 62 ~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~l~~--~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 139 (383)
T 3kax_A 62 ENIGDIICNWTKKQYNWDIQKEWIVFSAGIVPALSTSIQAFTK--ENESVLVQPPIYPPFFEMVTTNNRQLCVSPLQKQN 139 (383)
T ss_dssp TTHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHCC--TTCEEEECSSCCHHHHHHHHHTTCEEEECCCEEET
T ss_pred HHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHHHHHHHhCC--CCCEEEEcCCCcHHHHHHHHHcCCEEEeccceecC
Confidence 3788999999999999554445699999999999999888865 8999999999999999999999999999998643
Q ss_pred --CccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCC
Q 011842 217 --GEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPK 291 (476)
Q Consensus 217 --g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~ 291 (476)
+.+|+++|++++.++++ +|++++++|++|.+.| +++|+++|++||+ ++++|++|+.+........+.
T Consensus 140 ~~~~~d~~~l~~~l~~~~~---~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~-----~li~De~~~~~~~~g~~~~~~ 211 (383)
T 3kax_A 140 DTYAIDFEHLEKQFQQGVK---LMLLCSPHNPIGRVWKKEELTKLGSLCTKYNV-----IVVADEIHSDIIYADHTHTPF 211 (383)
T ss_dssp TEEECCHHHHHHHHTTTCC---EEEEESSBTTTTBCCCHHHHHHHHHHHHHHTC-----EEEEECTTTTCBCTTCCCCCG
T ss_pred CcEEEcHHHHHHHhCcCCe---EEEEeCCCCCCCcCcCHHHHHHHHHHHHHCCC-----EEEEEccccccccCCCCceeH
Confidence 35999999999955444 7777889999999966 6677777999999 999999998765532222211
Q ss_pred CCCcc---cccEEEEcCCCCCC-CCCCceeEEee-hhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhC--hh
Q 011842 292 VSFKK---PIGSVSVSGHKFVG-CPMPCGVQITR-MEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKG--YK 364 (476)
Q Consensus 292 ~~~~~---~~Dsi~~s~hK~l~-~p~~~G~l~~~-~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g--~~ 364 (476)
..... ..++++.++||+++ .++++|+++++ +++.+.+....... + .++ ...+.++++...+. .+
T Consensus 212 ~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~-----~-~~~---~~~~~~~a~~~~l~~~~~ 282 (383)
T 3kax_A 212 ASLSEELAARTITCMAPSKTFNIAGLQASIIIIPNEKLRQAFTSIQYRQ-----G-FHG---LNIFAYTAMQSAYTECND 282 (383)
T ss_dssp GGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCHHHHHHHHHHHHHT-----T-CCC---CCHHHHHHHHHHTTTCHH
T ss_pred hhcCccccCcEEEEEEChhhccCcchhheEEEeCCHHHHHHHHHHHhhc-----c-cCC---CCHHHHHHHHHHHHhhHH
Confidence 22211 24578889999887 77899999984 55555442211110 0 011 12344444444443 33
Q ss_pred cHHHHHHHHHHHHHHHHHHHHhc--CCeEeecCCeeEEE-EecC----CcHHH----h--hceeecc-------cCCEEE
Q 011842 365 GFQKEVQKCLRNAHYLKDRLLDA--GISAMLNELSSTVV-FERP----QDEEF----V--RRWQLAC-------QGNIAH 424 (476)
Q Consensus 365 g~~~~~~~~~~~a~~l~~~L~~~--g~~~~~~~~~~iv~-f~~~----~~~~~----~--~~~~l~~-------~~~~lR 424 (476)
.+++..++..++++++.+.|++. ++. +.++..+++. +..+ +..++ . +++.+.. ..+.+|
T Consensus 283 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iR 361 (383)
T 3kax_A 283 WLNEIRFYIEDNAKFACEYIKDHIPTLS-VMKPEGSFLLWIDCSALNLSQDERTKLLEEKGKIIVEPGEKYGLGGEEHIG 361 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCTTCE-ECCCSBSSEEEEECGGGCCCHHHHHHHHHHTSCEECEESGGGCTTCTTEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCce-EecCCceEEEEEEccccCCCHHHHHHHHHhhCCEEeECchhhcCCCCCeEE
Confidence 46778888899999999999984 554 4444443333 4443 22222 2 1333321 237899
Q ss_pred EEEcCCCCHHHHHHHHHHHHHHH
Q 011842 425 VVVMPNVTIDKLDDFLNELIENR 447 (476)
Q Consensus 425 v~~~~~~T~edid~~~~~l~~~~ 447 (476)
++++ +++++|+++++.|+++.
T Consensus 362 i~~~--~~~~~i~~~l~~l~~~l 382 (383)
T 3kax_A 362 INIG--CPRSVLEEILNRLRHTF 382 (383)
T ss_dssp EECS--SCHHHHHHHHHHHHHHH
T ss_pred EEEc--CCHHHHHHHHHHHHHHh
Confidence 9877 58999999999998764
No 91
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=99.92 E-value=1.1e-23 Score=216.67 Aligned_cols=292 Identities=13% Similarity=0.045 Sum_probs=208.4
Q ss_pred HHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCC-CC
Q 011842 138 RQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCL-IS 216 (476)
Q Consensus 138 ~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~-~~ 216 (476)
.++++++++|+++.+|++.+..++++|+|+++|+..++.++.. +++.|++..++|.++..+++..|.+++.+|.+ .+
T Consensus 99 ~~l~~~l~~~l~~~~g~~~~~~~v~~~~g~~ea~~~a~~~~~~--~gd~Vi~~~~~y~~~~~~~~~~g~~~~~~~~~~~~ 176 (421)
T 3l8a_A 99 DDLYQAVIDWERKEHDYAVVKEDILFIDGVVPAISIALQAFSE--KGDAVLINSPVYYPFARTIRLNDHRLVENSLQIIN 176 (421)
T ss_dssp HHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSC--TEEEEEEEESCCHHHHHHHHHTTEEEEEEECEEET
T ss_pred HHHHHHHHHHHHHHhCCCCCHHHEEEcCCHHHHHHHHHHHhcC--CCCEEEECCCCcHHHHHHHHHCCCEEEeccccccC
Confidence 5899999999999999665556799999999999999998865 88999999999999999999999999999985 33
Q ss_pred --CccCHHHHHHHHH-cCCCCcEEEEEeeCCCccccc---cCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCC
Q 011842 217 --GEIDCADFKAKLL-QNKDKPAIINVNIGTTVKGAV---DDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAP 290 (476)
Q Consensus 217 --g~~D~~~Le~~l~-~~~~~p~~vv~t~gtt~tG~i---d~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~ 290 (476)
+.+|+++|++++. +++ .+|+++++.+++|.+ +++++|+++|++||+ ++++|++|+++........+
T Consensus 177 ~~~~~d~~~le~~i~~~~~---~~vil~~p~nptG~~~~~~~l~~l~~l~~~~~~-----~li~De~~~~~~~~g~~~~~ 248 (421)
T 3l8a_A 177 GRFEIDFEQLEKDIIDNNV---KIYLLCSPHNPGGRVWDNDDLIKIAELCKKHGV-----ILVSDEIHQDLALFGNTHHS 248 (421)
T ss_dssp TEEECCHHHHHHHHHHTTE---EEEEEESSBTTTTBCCCHHHHHHHHHHHHHHTC-----EEEEECTTTTCBCTTCCCCC
T ss_pred CCeeeCHHHHHHHhhccCC---eEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCC-----EEEEEccccccccCCCCCcc
Confidence 3689999999998 344 477888999999998 789999999999999 99999999876654322222
Q ss_pred CCCCc---ccccEEEEcCCCCCC-CCCCceeEEee-hhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhc
Q 011842 291 KVSFK---KPIGSVSVSGHKFVG-CPMPCGVQITR-MEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKG 365 (476)
Q Consensus 291 ~~~~~---~~~Dsi~~s~hK~l~-~p~~~G~l~~~-~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g 365 (476)
...+. ...+.+..+++|+++ .++++|+++++ +++.+.+....... + .++.+.....++.+++.. +.+.
T Consensus 249 ~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~~~~~~~l~~~~~~~~~~~-----~-~~~~n~~~~~a~~aal~~-~~~~ 321 (421)
T 3l8a_A 249 LNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQNESLRRKFQYRQLAN-----N-QHEVPTVGMIATQAAFQY-GKPW 321 (421)
T ss_dssp GGGSCTTGGGTEEEEECSHHHHTCGGGCCEEEECCSHHHHHHHHHHHHHT-----T-CSCCCHHHHHHHHHHHHH-CHHH
T ss_pred HHHcCchhcCcEEEEEeChhhccCchhheEeEEcCCHHHHHHHHHHHHhc-----c-cCCCCHHHHHHHHHHHhc-cHHH
Confidence 11211 125577889999986 67899999998 55655442211110 0 111111222223333332 3445
Q ss_pred HHHHHHHHHHHHHHHHHHHHhc-CCeEeecCCeeEEEEecCC----cHH----Hhh--ceeec-------ccCCEEEEEE
Q 011842 366 FQKEVQKCLRNAHYLKDRLLDA-GISAMLNELSSTVVFERPQ----DEE----FVR--RWQLA-------CQGNIAHVVV 427 (476)
Q Consensus 366 ~~~~~~~~~~~a~~l~~~L~~~-g~~~~~~~~~~iv~f~~~~----~~~----~~~--~~~l~-------~~~~~lRv~~ 427 (476)
+++..++..+++++|.+.|++. ++....+....+..+..+. ..+ +.+ ++.+. ...+.+|+++
T Consensus 322 ~~~~~~~~~~~~~~l~~~L~~~~~i~~~~~~~~~~~~v~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~ 401 (421)
T 3l8a_A 322 LEELKTVIEGNIKLVIKELEAKTKIKVMEPEGTYLVWLDFSAYAIAQPQLSEKLQNEAKVVLNDGAHFGKEGKYFARLNV 401 (421)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCSCEEECCSBSSEEEEECGGGTCCTTHHHHHHHHTTCEECEEGGGGCGGGTTEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCceEeCCCeeEEEEEeccccCCCHHHHHHHHHHhCCEEEECchhhCCCCCCEEEEEe
Confidence 7888888999999999999986 5544433333333344332 222 222 33332 2247899987
Q ss_pred cCCCCHHHHHHHHHHHHHHHH
Q 011842 428 MPNVTIDKLDDFLNELIENRS 448 (476)
Q Consensus 428 ~~~~T~edid~~~~~l~~~~~ 448 (476)
. +|+++|+++++.|+++.+
T Consensus 402 ~--~~~~~i~~~l~~l~~~l~ 420 (421)
T 3l8a_A 402 A--TPKNTVQEALSRIISVFG 420 (421)
T ss_dssp C--SCHHHHHHHHHHHHHHC-
T ss_pred c--CCHHHHHHHHHHHHHHHh
Confidence 6 799999999999988753
No 92
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=99.92 E-value=3.2e-23 Score=208.49 Aligned_cols=275 Identities=10% Similarity=-0.025 Sum_probs=203.6
Q ss_pred HHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccCH
Q 011842 142 VGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGEIDC 221 (476)
Q Consensus 142 ~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~ 221 (476)
.++++++++++|.+++ .+++|+|||+|+..++.+... +++.|+++.++|.++...++..|++++.+|.++++.+|+
T Consensus 70 ~~lr~~la~~~~~~~~--~v~~~~g~t~a~~~~~~~~~~--~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~ 145 (363)
T 3ffh_A 70 SSLRKEVADFYQLEEE--ELIFTAGVDELIELLTRVLLD--TTTNTVMATPTFVQYRQNALIEGAEVREIPLLQDGEHDL 145 (363)
T ss_dssp HHHHHHHHHHHTCCGG--GEEEESSHHHHHHHHHHHHCS--TTCEEEEEESSCHHHHHHHHHHTCEEEEEECCTTSCCCH
T ss_pred HHHHHHHHHHhCCChh--hEEEeCCHHHHHHHHHHHHcc--CCCEEEEcCCChHHHHHHHHHcCCEEEEecCCCCCCcCH
Confidence 3455667777887643 599999999999999888754 899999999999999999999999999999988899999
Q ss_pred HHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHh--CCCCCceEEEEecCcccccccccccCCCCCCc--cc
Q 011842 222 ADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEES--GFTQDRFYIHCDGALFGLMMPFVKKAPKVSFK--KP 297 (476)
Q Consensus 222 ~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~--g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~--~~ 297 (476)
++|++++.+++ .+|+++++++++|.+.|+++|.++++.+ |+ ++|+|++|+.+.. . ......... ..
T Consensus 146 ~~l~~~i~~~~---~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~-----~li~De~~~~~~~-~-~~~~~~~~~~~~~ 215 (363)
T 3ffh_A 146 EGMLNAIDEKT---TIVWICNPNNPTGNYIELADIQAFLDRVPSDV-----LVVLDEAYIEYVT-P-QPEKHEKLVRTYK 215 (363)
T ss_dssp HHHHHHCCTTE---EEEEEESSCTTTCCCCCHHHHHHHHTTSCTTS-----EEEEECTTGGGCS-S-CCCCCGGGGGTCT
T ss_pred HHHHHhcccCC---CEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCc-----EEEEeCchHhhcC-c-cccCHHHHhhcCC
Confidence 99999996544 4888889999999999999999999988 88 9999999986554 1 111111111 11
Q ss_pred ccEEEEcCCCCCC-CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhC-hhcHHHHHHHHHH
Q 011842 298 IGSVSVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKG-YKGFQKEVQKCLR 375 (476)
Q Consensus 298 ~Dsi~~s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g-~~g~~~~~~~~~~ 375 (476)
.+++..+++|+++ .++++|++++++++.+.+...... .+ ...+.++++...+. .+.+++..++..+
T Consensus 216 ~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~~---------~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 283 (363)
T 3ffh_A 216 NLIITRTFSKIYGLASARVGYGIADKEIIRQLNIVRPP---------FN---TTSIGQKLAIEAIKDQAFIGECRTSNAN 283 (363)
T ss_dssp TEEEEEESSSTTCCSSCCCEEEEECHHHHHHHHHTCCS---------CC---CBHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred CEEEEeechhhhcCchhceeeeecCHHHHHHHHHhCCC---------CC---CCHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 3466788899997 678889999988876655322111 11 12344444444332 2456788888999
Q ss_pred HHHHHHHHHHh-cCCeEeecCCeeEEEEecCC-cHHHh-----hceeecc-----cCCEEEEEEcCCCCHHHHHHHHHHH
Q 011842 376 NAHYLKDRLLD-AGISAMLNELSSTVVFERPQ-DEEFV-----RRWQLAC-----QGNIAHVVVMPNVTIDKLDDFLNEL 443 (476)
Q Consensus 376 ~a~~l~~~L~~-~g~~~~~~~~~~iv~f~~~~-~~~~~-----~~~~l~~-----~~~~lRv~~~~~~T~edid~~~~~l 443 (476)
+++++.+.|++ .|+. +.++..+++.+..+. ..++. +++.+.. ..+.+|+++. |++|+++++++|
T Consensus 284 ~~~~l~~~l~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~iRis~~---~~~~i~~~~~~l 359 (363)
T 3ffh_A 284 GIKQYEAFAKRFEKVK-LYPANGNFVLIDLGIEAGTIFSYLEKNGYITRSGAALGFPTAVRITIG---KEEDNSAVIALL 359 (363)
T ss_dssp HHHHHHHHHHHCTTCE-ECCCCSSEEEEECSSCHHHHHHHHHHTTEECEETTTTTCTTEEEEECC---CHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCCce-ECCCCCeEEEEECCCCHHHHHHHHHHCCeEEEeCccCCCCCeEEEECC---CHHHHHHHHHHH
Confidence 99999999999 6664 445556777777763 33332 2333322 2478999876 999999999999
Q ss_pred HHH
Q 011842 444 IEN 446 (476)
Q Consensus 444 ~~~ 446 (476)
+++
T Consensus 360 ~~~ 362 (363)
T 3ffh_A 360 EKL 362 (363)
T ss_dssp HHH
T ss_pred HHh
Confidence 875
No 93
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=99.92 E-value=8.5e-24 Score=216.48 Aligned_cols=289 Identities=12% Similarity=0.066 Sum_probs=208.9
Q ss_pred hHHHHHHHHHHHHHHcCCCCCc-ccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCC
Q 011842 137 SRQFEVGVLDWFARLWELENNE-YWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLI 215 (476)
Q Consensus 137 ~~~le~~~~~~la~l~g~~~~~-~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~ 215 (476)
..++++++.+++.+.+|.+.++ ..+++|+|+++|+..++.++.. |++.|+++.++|.++...++..|++++.+|.++
T Consensus 87 ~~~lr~~ia~~~~~~~g~~~~~~~~v~~t~G~~~al~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~ 164 (404)
T 2o1b_A 87 KEAFKQAIVDFYQRQYNVTLDKEDEVCILYGTKNGLVAVPTCVIN--PGDYVLLPDPGYTDYLAGVLLADGKPVPLNLEP 164 (404)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCTTTSEEEESSHHHHHHHHHHHHCC--TTCEEEEEESCCSSHHHHHHHTTCEEEEEECCT
T ss_pred CHHHHHHHHHHHHHHhCCCCCCcccEEEcCCcHHHHHHHHHHhcC--CCCEEEEcCCCchhHHHHHHHCCCEEEEeccCc
Confidence 4589999999999988986332 4599999999999999988765 889999999999999999999999999999876
Q ss_pred C-CccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCC
Q 011842 216 S-GEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPK 291 (476)
Q Consensus 216 ~-g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~ 291 (476)
+ ..+|+++|++++.+++ .+|++++++|++|.+.| +++|+++|++||+ ++++|++|+.+.+.. ...+.
T Consensus 165 ~~~~~d~~~l~~~l~~~~---~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~-----~li~De~~~~~~~~g-~~~~~ 235 (404)
T 2o1b_A 165 PHYLPDWSKVDSQIIDKT---KLIYLTYPNNPTGSTATKEVFDEAIAKFKGTDT-----KIVHDFAYGAFGFDA-KNPSI 235 (404)
T ss_dssp TTCCCCGGGSCHHHHHHE---EEEEECSSCTTTCCCCCHHHHHHHHHHHTTSSC-----EEEEECTTTTCBSSS-CCCCG
T ss_pred ccCcCCHHHHHHhhccCc---eEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCC-----EEEEEccchhcccCC-CCCCh
Confidence 3 4589999999997544 47777889999999975 7899999999999 999999998765432 22122
Q ss_pred CCCc--ccccEEEEcCCCCCC-CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHh--ChhcH
Q 011842 292 VSFK--KPIGSVSVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRK--GYKGF 366 (476)
Q Consensus 292 ~~~~--~~~Dsi~~s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~--g~~g~ 366 (476)
.... ...++++.++||+++ .++++|++++++++++.+.....+. .++.+ .+.++++...+ +.+.+
T Consensus 236 ~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~~~-------~~~~~---~~~~~a~~~~l~~~~~~~ 305 (404)
T 2o1b_A 236 LASENGKDVAIEIYSLSKGYNMSGFRVGFAVGNKDMIQALKKYQTHT-------NAGMF---GALQDAAIYALNHYDDFL 305 (404)
T ss_dssp GGSTTHHHHEEEEEESTTTTTCGGGCCEEEEECHHHHHHHHHHHHHH-------CCCCC---HHHHHHHHHHHHHCHHHH
T ss_pred hhcCCCCCCEEEEEecchhccCchhheEeEecCHHHHHHHHHHHhhc-------cCCCC---HHHHHHHHHHHhcCHHHH
Confidence 2221 135788999999997 6678999999888766553221111 11111 33444444333 23457
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecCC---cHHH----h--hceeecc-------cCCEEEEEEcCC
Q 011842 367 QKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERPQ---DEEF----V--RRWQLAC-------QGNIAHVVVMPN 430 (476)
Q Consensus 367 ~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~---~~~~----~--~~~~l~~-------~~~~lRv~~~~~ 430 (476)
++..++..++++++.+.|++.|+....++...++.+..+. ..++ . +++.+.. ..+.+|+++..
T Consensus 306 ~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~- 384 (404)
T 2o1b_A 306 EEQSNVFKTRRDRFEAMLAKADLPFVHAKGGIYVWLETPPGYDSEQFEQFLVQEKSILVAPGKPFGENGNRYVRISLAL- 384 (404)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCEECCCBSSEEEEECCTTCCHHHHHHHHHHHHCEECEESGGGCGGGTTEEEEECCS-
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCeecCCCcceEEEEeCCCCCCHHHHHHHHHHHCCEEEeCchhhCcCCCCeEEEEEcC-
Confidence 7778888899999999999887654433333345566553 1222 2 2333321 24689998875
Q ss_pred CCHHHHHHHHHHHHHHHH
Q 011842 431 VTIDKLDDFLNELIENRS 448 (476)
Q Consensus 431 ~T~edid~~~~~l~~~~~ 448 (476)
++++|+.+++.|.++.+
T Consensus 385 -~~e~l~~~l~~l~~~l~ 401 (404)
T 2o1b_A 385 -DDQKLDEAAIRLTELAY 401 (404)
T ss_dssp -CTTHHHHHHHHHHGGGG
T ss_pred -CHHHHHHHHHHHHHHHH
Confidence 78899999999987654
No 94
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.92 E-value=1.7e-23 Score=212.21 Aligned_cols=281 Identities=11% Similarity=-0.003 Sum_probs=198.0
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCc
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGE 218 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~ 218 (476)
....++++.+++++|.+ ..+++++||+|+..++.++.. |++.|+++.+.|.++..+++..|++++.+|.
T Consensus 84 ~~~~~l~~~la~~~g~~----~~i~~~sGt~a~~~~~~~~~~--~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~----- 152 (384)
T 1bs0_A 84 VVHQALEEELAEWLGYS----RALLFISGFAANQAVIAAMMA--KEDRIAADRLSHASLLEAASLSPSQLRRFAH----- 152 (384)
T ss_dssp HHHHHHHHHHHHHHTCS----EEEEESCHHHHHHHHHHHHCC--TTCEEEEETTCCHHHHHHHHTSSSEEEEECT-----
T ss_pred HHHHHHHHHHHHHhCCC----cEEEeCCcHHHHHHHHHHhCC--CCcEEEEcccccHHHHHHHHHcCCCEEEeCC-----
Confidence 44556667777888885 266777779999998887754 8999999999999999999999999999985
Q ss_pred cCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCccccccc-ccccC-CCCCCcc
Q 011842 219 IDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMP-FVKKA-PKVSFKK 296 (476)
Q Consensus 219 ~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~-~~~~~-~~~~~~~ 296 (476)
+|+++|++++++......+|+++++.+++|.+.|+++|.++|++||+ ++++|++|+.+.+. ..... ..+. .
T Consensus 153 ~d~~~l~~~l~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~-----~li~De~~~~~~~~~~~~~~~~~~~--~ 225 (384)
T 1bs0_A 153 NDVTHLARLLASPCPGQQMVVTEGVFSMDGDSAPLAEIQQVTQQHNG-----WLMVDDAHGTGVIGEQGRGSCWLQK--V 225 (384)
T ss_dssp TCHHHHHHHHHSCCSSCEEEEEESBCTTTCCBCCHHHHHHHHHHTTC-----EEEEECTTTTTTSSGGGCCHHHHTT--C
T ss_pred CCHHHHHHHHHhcCCCCeEEEEeCCCCCCCCccCHHHHHHHHHHcCc-----EEEEECCcccceecCCCCchHHhcC--C
Confidence 48999999998764334678888899999999999999999999999 99999999755432 11110 0011 2
Q ss_pred cccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCC-ccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHHH
Q 011842 297 PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSN-VEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLR 375 (476)
Q Consensus 297 ~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~-~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~ 375 (476)
..|+++.|+||+++ |.+ |++++++++++.+... ..|.. ..+.+......+.++++.+.....++..++..+
T Consensus 226 ~~di~~~s~sK~~~-~~G-G~~~~~~~~~~~l~~~~~~~~~------~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~ 297 (384)
T 1bs0_A 226 KPELLVVTFGKGFG-VSG-AAVLCSSTVADYLLQFARHLIY------STSMPPAQAQALRASLAVIRSDEGDARREKLAA 297 (384)
T ss_dssp CCSEEEEESSSTTS-SCC-EEEEECHHHHHHHHHHCHHHHS------SBCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred CCcEEEeeccchhh-ccC-cEEEeCHHHHHHHHHhchhhhc------CCCCCHHHHHHHHHHHHHHhccccHHHHHHHHH
Confidence 37899999999998 555 9999988776655321 12221 111211122223334444321145678888999
Q ss_pred HHHHHHHHHHhcCCeEeecCCeeEEEEecCC---cHHHh-----hceeecc--------cCCEEEEEEcCCCCHHHHHHH
Q 011842 376 NAHYLKDRLLDAGISAMLNELSSTVVFERPQ---DEEFV-----RRWQLAC--------QGNIAHVVVMPNVTIDKLDDF 439 (476)
Q Consensus 376 ~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~---~~~~~-----~~~~l~~--------~~~~lRv~~~~~~T~edid~~ 439 (476)
+++++.+.|++.|+.. .++.++++.+..+. ..++. +++.+.. ..+.+|++++..+|+++|+++
T Consensus 298 ~~~~l~~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~~Ri~~~~~~~~~~i~~~ 376 (384)
T 1bs0_A 298 LITRFRAGVQDLPFTL-ADSCSAIQPLIVGDNSRALQLAEKLRQQGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRL 376 (384)
T ss_dssp HHHHHHHHHTTSSCEE-CSCCSSBCCEEEESHHHHHHHHHHHHHTTEECCEECTTSSCTTCEEECCBCCTTCCHHHHHHH
T ss_pred HHHHHHHHHHhcCCcc-cCCCCCEEEEEeCCHHHHHHHHHHHHHCCcEEEeecCCCCCCCCceEEEEEcCCCCHHHHHHH
Confidence 9999999999987643 34445555555442 12222 2333321 136899999999999999999
Q ss_pred HHHHHHH
Q 011842 440 LNELIEN 446 (476)
Q Consensus 440 ~~~l~~~ 446 (476)
+++|+++
T Consensus 377 ~~~l~~~ 383 (384)
T 1bs0_A 377 LEVLHGN 383 (384)
T ss_dssp HHHHHHH
T ss_pred HHHHHhh
Confidence 9999865
No 95
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=99.92 E-value=1.6e-23 Score=211.94 Aligned_cols=286 Identities=15% Similarity=0.124 Sum_probs=205.7
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcc-cEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCC
Q 011842 136 HSRQFEVGVLDWFARLWELENNEY-WGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCL 214 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~-~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~ 214 (476)
+..++++++.+++.+.+|.+.+.. .+++|+|+++|+..++.++.. |++.|+++.++|.++...++..|++++.+|++
T Consensus 64 ~~~~l~~~ia~~~~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~l~~--~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~ 141 (376)
T 2dou_A 64 CTLPFLEEAARWYEGRYGVGLDPRREALALIGSQEGLAHLLLALTE--PEDLLLLPEVAYPSYFGAARVASLRTFLIPLR 141 (376)
T ss_dssp HHHHHHHHHHHHHHHHHSCCCCTTTSEEEESSHHHHHHHHHHHHCC--TTCEEEEESSCCHHHHHHHHHTTCEEEEECBC
T ss_pred CCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHHHHHHhcC--CCCEEEECCCCcHhHHHHHHHcCCEEEEeeCC
Confidence 567889999999888889863323 599999999999999888765 88999999999999999999999999999984
Q ss_pred CCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCC
Q 011842 215 ISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPK 291 (476)
Q Consensus 215 ~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~ 291 (476)
.+..+|+++|++++.+++ .+|++++++|++|.+.| +++|+++|++||+ ++++|++|+.+.+.. ...+.
T Consensus 142 ~~~~~d~~~l~~~l~~~~---~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~-----~li~De~~~~~~~~~-~~~~~ 212 (376)
T 2dou_A 142 EDGLADLKAVPEGVWREA---KVLLLNYPNNPTGAVADWGYFEEALGLARKHGL-----WLIHDNPYVDQVYEG-EAPSP 212 (376)
T ss_dssp TTSSBCGGGSCHHHHHHE---EEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTC-----EEEEECTTGGGBSSS-CCCCG
T ss_pred CCCCCCHHHHHHhhccCc---eEEEECCCCCCcCccCCHHHHHHHHHHHHHcCC-----EEEEEccchhcccCC-CCCCh
Confidence 445689999999997543 47778889999999866 7889999999999 999999998765432 11111
Q ss_pred CCCc--ccccEEEEcCCCCCC-CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhC--hhcH
Q 011842 292 VSFK--KPIGSVSVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKG--YKGF 366 (476)
Q Consensus 292 ~~~~--~~~Dsi~~s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g--~~g~ 366 (476)
+... ...+++..+++|+++ .++++|+++.++++++.+....... ..+.+ .+.++++...+. .+.+
T Consensus 213 ~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~~~~~-------~~~~~---~~~~~a~~~~l~~~~~~~ 282 (376)
T 2dou_A 213 LALPGAKERVVELFSLSKSYNLAGFRLGFALGSEEALARLERVKGVI-------DFNQY---AGVLRMGVEALKTPKEVV 282 (376)
T ss_dssp GGSTTGGGTEEEEEEHHHHHTCGGGCCEEEEECHHHHHHHHHHHHHH-------CCCSC---HHHHHHHHHHHTSCHHHH
T ss_pred hhcCCCCCcEEEEecchhhcCChhheeEEEecCHHHHHHHHHHHHhc-------ccCCC---HHHHHHHHHHHhCcHHHH
Confidence 2221 125678889999986 6678999999888766553211111 11111 234444444442 3456
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCeEeecCC-eeEEEEecCCc---HHHh-----hceeecc-------cCCEEEEEEcCC
Q 011842 367 QKEVQKCLRNAHYLKDRLLDAGISAMLNEL-SSTVVFERPQD---EEFV-----RRWQLAC-------QGNIAHVVVMPN 430 (476)
Q Consensus 367 ~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~-~~iv~f~~~~~---~~~~-----~~~~l~~-------~~~~lRv~~~~~ 430 (476)
++..++..++++++.+.|++. +. +.++. ..++.+..+.. .++. +++.+.. ..+.+|++++.
T Consensus 283 ~~~~~~~~~~~~~l~~~L~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~f~~~~~~~~Ris~~~- 359 (376)
T 2dou_A 283 RGYARVYRERALGMAEALKGV-LS-LLPPRATMYLWGRLPEGVDDLEFGLRLVERGVALAPGRGFGPGGKGFVRIALVR- 359 (376)
T ss_dssp HHHHHHHHHHHHHHHHHHTTT-SE-ECCCCBSSEEEEECCTTCCHHHHHHHHHHTTEECEEGGGGCGGGTTEEEEECCS-
T ss_pred HHHHHHHHHHHHHHHHHHHHh-cC-ccCCCeeEEEEEECCCCCCHHHHHHHHHHCCEEEcCchhhCCCCCCeEEEEecC-
Confidence 777888889999999999887 43 33343 34555666531 2232 2333321 24789999864
Q ss_pred CCHHHHHHHHHHHHHH
Q 011842 431 VTIDKLDDFLNELIEN 446 (476)
Q Consensus 431 ~T~edid~~~~~l~~~ 446 (476)
|+++|+.+++.|+++
T Consensus 360 -~~~~i~~~l~~l~~~ 374 (376)
T 2dou_A 360 -PLEELLEAAKRIREA 374 (376)
T ss_dssp -CHHHHHHHHHHHHHT
T ss_pred -CHHHHHHHHHHHHHH
Confidence 899999999998765
No 96
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=99.92 E-value=1.2e-22 Score=209.22 Aligned_cols=296 Identities=8% Similarity=-0.024 Sum_probs=208.3
Q ss_pred hhHHHHHHHHHHHHHHcCCCCC-------cccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeE
Q 011842 136 HSRQFEVGVLDWFARLWELENN-------EYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMEC 208 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~-------~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v 208 (476)
+..++++++.+++++..|.+.+ ..++++|+|+++|+..++.+..+ ||+.|++.+++|.++...++..|+++
T Consensus 79 G~~~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~--~gd~Vlv~~p~y~~~~~~~~~~g~~~ 156 (425)
T 2r2n_A 79 GIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIIN--PGDNVLLDEPAYSGTLQSLHPLGCNI 156 (425)
T ss_dssp CCHHHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHCC--TTCEEEEESSCCHHHHHHHGGGTCEE
T ss_pred CCHHHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHhCC--CCCEEEEeCCCcHHHHHHHHHcCCEE
Confidence 4468999999999999998752 24699999999999999988865 89999999999999999999999999
Q ss_pred EEEeCCCCCccCHHHHHHHHHcCC---------CCcEEEEE-eeCCCccccccCHH---HHHHHHHHhCCCCCceEEEEe
Q 011842 209 VKVDCLISGEIDCADFKAKLLQNK---------DKPAIINV-NIGTTVKGAVDDLD---LVIQTLEESGFTQDRFYIHCD 275 (476)
Q Consensus 209 ~~v~~~~~g~~D~~~Le~~l~~~~---------~~p~~vv~-t~gtt~tG~id~l~---~I~~ia~~~g~~~~~~~lhvD 275 (476)
+.+|++++ .+|+++|++++++.. .++.+|++ +++.|+||.+.+.+ +|+++|++||+ ++++|
T Consensus 157 ~~v~~~~~-~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~-----~li~D 230 (425)
T 2r2n_A 157 INVASDES-GIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDF-----LIIED 230 (425)
T ss_dssp EEECEETT-EECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTC-----EEEEE
T ss_pred EEeCcCCC-CCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCC-----EEEEE
Confidence 99998765 499999999997311 22346555 57899999997755 99999999999 99999
Q ss_pred cCcccccccccccCCCCCCc-ccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHH
Q 011842 276 GALFGLMMPFVKKAPKVSFK-KPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFL 354 (476)
Q Consensus 276 ~a~~g~~~~~~~~~~~~~~~-~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~ 354 (476)
++|+.+.+......+...+. ...+++..+++|+++.++++|++++++++++.+.....+. ..+.+ .+.+
T Consensus 231 e~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~SK~~~~GlRiG~~~~~~~l~~~l~~~~~~~-------~~~~~---~~~q 300 (425)
T 2r2n_A 231 DPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKIISSGLRIGFLTGPKPLIERVILHIQVS-------TLHPS---TFNQ 300 (425)
T ss_dssp CTTGGGBSSSSCCCCTGGGCTTSCEEEEEESTTTTCSTTCCEEEEEEHHHHHHHHHHHHTT-------TCSSC---HHHH
T ss_pred CCcccccCCCCCCCCccccCCCCCEEEEccchhhccCccceEEEecCHHHHHHHHHHHHHh-------cCCCC---HHHH
Confidence 99986654322211112221 1245778899999997889999999988766553211111 11112 3333
Q ss_pred HHHHHHhCh-------hcHHHHHHHHHHHHHHHHHHHHhc--CCeEee-cCCeeEEEEecCC---cHHH-h-----hcee
Q 011842 355 WYTLNRKGY-------KGFQKEVQKCLRNAHYLKDRLLDA--GISAML-NELSSTVVFERPQ---DEEF-V-----RRWQ 415 (476)
Q Consensus 355 ~~~l~~~g~-------~g~~~~~~~~~~~a~~l~~~L~~~--g~~~~~-~~~~~iv~f~~~~---~~~~-~-----~~~~ 415 (476)
+++...+.. +.+++..++..++++++.+.|++. ++..+. +..++++.+..+. ..++ . ++..
T Consensus 301 ~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~l~~~gv~ 380 (425)
T 2r2n_A 301 LMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIKVKGINDVKELIEEKAVKMGVL 380 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEECCCSBSSEEEEEETTCSCCHHHHHTHHHHTTEE
T ss_pred HHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEeCCCceEEEEEEeCCCCCHHHHHHHHHHHCCcE
Confidence 333333321 234556677778889999999884 553333 3445666666553 2232 2 2233
Q ss_pred ec----c------cCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 011842 416 LA----C------QGNIAHVVVMPNVTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 416 l~----~------~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~ 450 (476)
+. . ..+.+|++++. .|+++|+.+++.|.++.++.
T Consensus 381 v~pg~~f~~~~~~~~~~iRis~~~-~~~~~i~~~~~~l~~~l~~~ 424 (425)
T 2r2n_A 381 MLPGNAFYVDSSAPSPYLRASFSS-ASPEQMDVAFQVLAQLIKES 424 (425)
T ss_dssp CEEGGGGSSSTTSCCCEEEEECSS-CCHHHHHHHHHHHHHHHHHH
T ss_pred EechhhhcCCCCCCCCEEEEEeCC-CCHHHHHHHHHHHHHHHHHh
Confidence 21 1 13689999873 69999999999999887653
No 97
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=99.92 E-value=6.3e-23 Score=208.69 Aligned_cols=287 Identities=11% Similarity=0.021 Sum_probs=203.5
Q ss_pred hHHHHHHHHHHHHHHcCCC-CCcc-cEEEcCCchhHHHHHHHHHHhhCCC-----cEEEecCCCchHHHHHHHHcCCeEE
Q 011842 137 SRQFEVGVLDWFARLWELE-NNEY-WGYITNCGTEGNLHGILVGREVFPD-----GILYASRESHYSVFKAARMYRMECV 209 (476)
Q Consensus 137 ~~~le~~~~~~la~l~g~~-~~~~-~g~~t~ggt~An~~al~aa~~~~p~-----~~Vl~s~~~H~S~~~~~~~~G~~v~ 209 (476)
..++++++.+++.+.+|.+ .+.. .+++|+|+++|+..++.+++. ++ +.|+++.++|.++...++.+|++++
T Consensus 68 ~~~lr~~la~~l~~~~g~~~~~~~~~i~~t~g~~~al~~~~~~~~~--~g~~~~~d~vl~~~p~~~~~~~~~~~~g~~~~ 145 (396)
T 3jtx_A 68 LPELRQACANWLKRRYDGLTVDADNEILPVLGSREALFSFVQTVLN--PVSDGIKPAIVSPNPFYQIYEGATLLGGGEIH 145 (396)
T ss_dssp CHHHHHHHHHHHHHHTTTCCCCTTTSEEEESSHHHHHHHHHHHHCC--C---CCCCEEEEEESCCHHHHHHHHHTTCEEE
T ss_pred cHHHHHHHHHHHHHhcCCCCCCCCCeEEEcCCcHHHHHHHHHHHhC--CCCccCCCEEEEcCCCcHhHHHHHHHcCCEEE
Confidence 3589999999999999975 2334 699999999999999988865 64 7999999999999999999999999
Q ss_pred EEeCCCCC-ccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCH---HHHHHHHHHhCCCCCceEEEEecCcccccccc
Q 011842 210 KVDCLISG-EIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDL---DLVIQTLEESGFTQDRFYIHCDGALFGLMMPF 285 (476)
Q Consensus 210 ~v~~~~~g-~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l---~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~ 285 (476)
.+|+++++ .+|+++|++++.+++ .+|+++++.|++|.+.|. ++|+++|++||+ ++++|++|+.+....
T Consensus 146 ~v~~~~~g~~~d~~~l~~~~~~~~---~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~-----~li~De~~~~~~~~~ 217 (396)
T 3jtx_A 146 FANCPAPSFNPDWRSISEEVWKRT---KLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGF-----IIASDECYSEIYFDG 217 (396)
T ss_dssp EEECCTTTCCCCGGGSCHHHHHTE---EEEEEESSCTTTCCCCCHHHHHHHHHHHHHHCC-----EEEEECTTTTCCSTT
T ss_pred EeecCCCCCccCHHHHHHhhccCc---EEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCC-----EEEEEccccccccCC
Confidence 99996544 689999999998754 377778999999999765 459999999999 999999998765432
Q ss_pred cccCCCCC------CcccccEEEEcCCCC-CCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHH
Q 011842 286 VKKAPKVS------FKKPIGSVSVSGHKF-VGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTL 358 (476)
Q Consensus 286 ~~~~~~~~------~~~~~Dsi~~s~hK~-l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l 358 (476)
....+... .....+++..+++|. +..++++|+++.++++++.+.....+. .++.+ .+.++++.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~-------~~~~~---~~~~~a~~ 287 (396)
T 3jtx_A 218 NKPLGCLQAAAQLGRSRQKLLMFTSLSKRSNVPGLRSGFVAGDAELLKNFLLYRTYH-------GSAMS---IPVQRASI 287 (396)
T ss_dssp CCCCCHHHHHHHTTCCCTTEEEEEESTTTSSCGGGCCEEEEECHHHHHHHHHHHHHH-------TCCCC---HHHHHHHH
T ss_pred CCCchHHhhhhhcccccCcEEEEeccccccCCcccceEEEEeCHHHHHHHHHHHhhc-------ccCCC---HHHHHHHH
Confidence 11111000 012356788899995 556789999999887766553221111 11111 23333333
Q ss_pred HHhC-hhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecCC--cHHHh----h--ceeec------------
Q 011842 359 NRKG-YKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERPQ--DEEFV----R--RWQLA------------ 417 (476)
Q Consensus 359 ~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~--~~~~~----~--~~~l~------------ 417 (476)
..+. .+.+++..++..++++++.+.|++. +....+....++.+..+. ..++. + +..+.
T Consensus 288 ~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~ 366 (396)
T 3jtx_A 288 AAWDDEQHVIDNRRLYQEKFERVIPILQQV-FDVKLPDASFYIWLKVPDGDDLAFARNLWQKAAIQVLPGRFLARDTEQG 366 (396)
T ss_dssp HHHHCCHHHHHHHHHHHHHHHHHHHHHTTT-SCCCCCSSSSEEEEECTTSCHHHHHHHHHHHHCEECEEGGGGCCCCTTC
T ss_pred HHhCCHHHHHHHHHHHHHHHHHHHHHHHhc-CCccCCCeeEEEEEECCCCCHHHHHHHHHHHCCEEEeCChHhCCccccc
Confidence 3332 3457778888888999999999875 222233345566666653 22221 2 33331
Q ss_pred -ccCCEEEEEEcCCCCHHHHHHHHHHHHHH
Q 011842 418 -CQGNIAHVVVMPNVTIDKLDDFLNELIEN 446 (476)
Q Consensus 418 -~~~~~lRv~~~~~~T~edid~~~~~l~~~ 446 (476)
...+.+|+++.. |+++|+.+++.|.++
T Consensus 367 ~~~~~~iRis~~~--~~~~i~~~l~~l~~~ 394 (396)
T 3jtx_A 367 NPGEGYVRIALVA--DVATCVKAAEDIVSL 394 (396)
T ss_dssp CTTTTEEEEECCS--CHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEEcC--CHHHHHHHHHHHHHH
Confidence 124789998764 999999999999875
No 98
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=99.92 E-value=5.1e-23 Score=212.04 Aligned_cols=292 Identities=10% Similarity=0.057 Sum_probs=207.1
Q ss_pred hHHHHHHHHHHHHHHcCCC--CCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHH-HHcCCeEEEEeC
Q 011842 137 SRQFEVGVLDWFARLWELE--NNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAA-RMYRMECVKVDC 213 (476)
Q Consensus 137 ~~~le~~~~~~la~l~g~~--~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~-~~~G~~v~~v~~ 213 (476)
..++++++.+++.+.+|.. .+...+++|+|+++++..++.+++. ||+.|++++++|.++...+ ...|++++.+|.
T Consensus 85 ~~~lr~~la~~~~~~~g~~~~~~~~~i~~~~G~~~ai~~~~~~~~~--~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~v~~ 162 (428)
T 1iay_A 85 LPEFRKAIAKFMEKTRGGRVRFDPERVVMAGGATGANETIIFCLAD--PGDAFLVPSPYYPAFNRDLRWRTGVQLIPIHC 162 (428)
T ss_dssp CHHHHHHHHHHHHHHTTTCSCCCTTSCEEEEHHHHHHHHHHHHHCC--TTCEEEEESSCCTTHHHHTTTTTCCEEEEECC
T ss_pred cHHHHHHHHHHHHHhcCCCCCCChhhEEEccChHHHHHHHHHHhCC--CCCeEEEccCCCcchHHHHHHhcCCEEEEeec
Confidence 5699999999999888843 2234589999999999999988865 8999999999999987755 467999999998
Q ss_pred CC--CCccCHHHHHHHHHc---CCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCcccccccc
Q 011842 214 LI--SGEIDCADFKAKLLQ---NKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPF 285 (476)
Q Consensus 214 ~~--~g~~D~~~Le~~l~~---~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~ 285 (476)
+. ++.+|+++|++++++ ...++.+|++++++|++|.+.| +++|+++|++||+ ++++|++|+++.+..
T Consensus 163 ~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~-----~li~Dea~~~~~~~~ 237 (428)
T 1iay_A 163 ESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNI-----HLVCDEIYAATVFDT 237 (428)
T ss_dssp CTTTTTCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTC-----EEEEECTTGGGCCSS
T ss_pred CCccCCcCCHHHHHHHHHHHHhcCCceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCe-----EEEEeccccccccCC
Confidence 73 357899999999975 2223557788899999999999 9999999999999 999999998754421
Q ss_pred cccCCCCCCccc-------cc--EEEEcCCCCCC-CCCCceeEEee-hhhhhhhcCCccccCCCCCcccCCCCChhHHHH
Q 011842 286 VKKAPKVSFKKP-------IG--SVSVSGHKFVG-CPMPCGVQITR-MEHINVLSSNVEYLASRDATIMGSRNGHAPIFL 354 (476)
Q Consensus 286 ~~~~~~~~~~~~-------~D--si~~s~hK~l~-~p~~~G~l~~~-~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~ 354 (476)
....+....... .| ++..++||+++ .++++|+++++ +++++.+.....+ .+. ..+.+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~~g~~Glr~G~~~~~~~~~~~~~~~~~~~---------~~~---~~~~~ 305 (428)
T 1iay_A 238 PQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPGFRVGIIYSFNDDVVNCARKMSSF---------GLV---STQTQ 305 (428)
T ss_dssp SCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTSSCGGGCEEEEEESCHHHHHHHHHHHTT---------SCC---CHHHH
T ss_pred CCccCHHHhccccccccCCCCcEEEEecchhhcCCCCceEEEEEeCCHHHHHHHHHHHhc---------ccC---CHHHH
Confidence 111110111111 46 67889999997 66789999994 5565544321111 111 13444
Q ss_pred HHHHHHhChh-----cHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecCC--------c-HHH----h-h-ce
Q 011842 355 WYTLNRKGYK-----GFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERPQ--------D-EEF----V-R-RW 414 (476)
Q Consensus 355 ~~~l~~~g~~-----g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~--------~-~~~----~-~-~~ 414 (476)
.++...+... .+++..++..+++++|.+.|++.|+....++..+++.+..+. . .++ . + +.
T Consensus 306 ~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi 385 (428)
T 1iay_A 306 YFLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVVGIKCLKNNAGLFCWMDLRPLLRESTFDSEMSLWRVIINDVKL 385 (428)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCBCCCSSSSEEEEECGGGCSSSSHHHHHHHHHHHHHTSCE
T ss_pred HHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCeeEEEEEechhhcCCCchhHHHHHHHHHHHhCCE
Confidence 4455544322 356677888889999999999987644333355666666542 1 122 2 2 33
Q ss_pred eecc-c------CCEEEEEEcCCCCHHHHHHHHHHHHHHHH
Q 011842 415 QLAC-Q------GNIAHVVVMPNVTIDKLDDFLNELIENRS 448 (476)
Q Consensus 415 ~l~~-~------~~~lRv~~~~~~T~edid~~~~~l~~~~~ 448 (476)
.+.. . .+.+|+++. .+|++++++++++|+++.+
T Consensus 386 ~v~~~~~~~~~~~~~iRis~~-~~~~e~i~~~~~~l~~~l~ 425 (428)
T 1iay_A 386 NVSPGSSFECQEPGWFRVCFA-NMDDGTVDIALARIRRFVG 425 (428)
T ss_dssp ECEEGGGGTCSSSSEEEEECS-SSCHHHHHHHHHHHHHHHH
T ss_pred EEeCchhhCCCCCCEEEEEEe-cCCHHHHHHHHHHHHHHHh
Confidence 3321 1 368999997 6899999999999988764
No 99
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.91 E-value=1.4e-23 Score=220.06 Aligned_cols=297 Identities=12% Similarity=0.063 Sum_probs=200.5
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCc-ccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHH--------HHHHcC-
Q 011842 136 HSRQFEVGVLDWFARLWELENNE-YWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFK--------AARMYR- 205 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~-~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~--------~~~~~G- 205 (476)
...++|+.+++++++++|+++++ ...+++++|+.+|+.++.+..+ |||.|++++++|.++.. .+++.|
T Consensus 87 ~~~~le~~~~~~~a~~~g~~~~~~~~~V~~~sGs~an~~~~~all~--pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~ 164 (483)
T 1rv3_A 87 HIDELETLCQKRALQAYGLDPQCWGVNVQPYSGSPANFAVYTALVE--PHGRIMGLDLPDGGHLTHGFMTDKKKISATSI 164 (483)
T ss_dssp HHHHHHHHHHHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHTC--TTCEEEEECGGGTCCGGGCCBCSSCBCSHHHH
T ss_pred hHHHHHHHHHHHHHHHhCCCcccCceEEEECCcHHHHHHHHHHhcC--CCCEEEEecCccCcCcchhhhhcccCcccccc
Confidence 45789999999999999998532 0124444555888888887755 99999999999877643 334445
Q ss_pred -CeEEEEeCC-CCCccCHHHHHHHHH-cCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCccccc
Q 011842 206 -MECVKVDCL-ISGEIDCADFKAKLL-QNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLM 282 (476)
Q Consensus 206 -~~v~~v~~~-~~g~~D~~~Le~~l~-~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~ 282 (476)
++++.++++ +++.+|+++|++++. .+++ +|++ ++++++ .+.|+++|.++|++||+ ++++|++|+.+.
T Consensus 165 ~~~~v~~~~~~~~~~iD~d~le~~i~~~~tk---lIi~-~~sn~~-~~~dl~~i~~ia~~~g~-----~livD~ah~~g~ 234 (483)
T 1rv3_A 165 FFESMAYKVNPDTGYIDYDRLEENARLFHPK---LIIA-GTSCYS-RNLDYGRLRKIADENGA-----YLMADMAHISGL 234 (483)
T ss_dssp HSEEEEECBCTTTCSBCHHHHHHHHHHHCCS---EEEE-CCSSCC-SCCCHHHHHHHHHHTTC-----EEEEECTTTHHH
T ss_pred eEEEEECccccCCCcCCHHHHHHHHhhcCCc---EEEE-eCCcCC-CcCCHHHHHHHHHHcCC-----EEEEEccchhcc
Confidence 345555556 568899999999998 5555 7777 677777 88999999999999999 999999997554
Q ss_pred ccccccCCCCCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcC----Cccc-----cCCC-CCcccCCCCChhHH
Q 011842 283 MPFVKKAPKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSS----NVEY-----LASR-DATIMGSRNGHAPI 352 (476)
Q Consensus 283 ~~~~~~~~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~----~~~y-----l~~~-~~~~~~sr~~~~~l 352 (476)
.+...+...+ ..+|++++++||++.+|.+ |+++++++... +.. ...| +... .....++.......
T Consensus 235 ~~~~~~~~p~---~~~div~~s~~K~l~Gprg-G~i~~~~~~~~-~~~~~g~~~~y~~~~~~~~~~~~~~~g~~~~~~ia 309 (483)
T 1rv3_A 235 VVAGVVPSPF---EHCHVVTTTTHKTLRGCRA-GMIFYRRGVRS-VDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIA 309 (483)
T ss_dssp HHHTSSCCGG---GTCSEEEEESSGGGCCCSC-EEEEEECSBCC--------CCBCCHHHHHHHHHTTTTCCSCCHHHHH
T ss_pred cccCCCCCCC---CCCcEEEecCcccCCCCCc-eEEEEcchhhh-hccccCcchhhHHHHHhhhhcCCcccCCccHHHHH
Confidence 4322221111 2489999999999986665 99999976321 000 0000 0000 01113444333344
Q ss_pred HHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCC-eeEEEEecC----CcHHHh---h--ceeec----c
Q 011842 353 FLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNEL-SSTVVFERP----QDEEFV---R--RWQLA----C 418 (476)
Q Consensus 353 ~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~-~~iv~f~~~----~~~~~~---~--~~~l~----~ 418 (476)
++.++++.....+++++.++..++++++.+.|++.|+..+.+.. ...+.+... ...++. + ++.+. .
T Consensus 310 al~~Al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~v~~~~~g~~~~~~~~~L~~~gI~v~~~~~p 389 (483)
T 1rv3_A 310 GVAVALKQAMTPEFKEYQRQVVANCRALSAALVELGYKIVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCP 389 (483)
T ss_dssp HHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEEGGGGTCCHHHHHHHHHHTTEECEEECCS
T ss_pred HHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhcCCEeccCCCCCceEEEeccCCCCCHHHHHHHHHhCCcEEecCCCC
Confidence 55667776666678999999999999999999999876554322 234444432 222221 1 22222 1
Q ss_pred ------cCCEEEEEEcCCCC----HHHHHHHHHHHHHHHHH
Q 011842 419 ------QGNIAHVVVMPNVT----IDKLDDFLNELIENRST 449 (476)
Q Consensus 419 ------~~~~lRv~~~~~~T----~edid~~~~~l~~~~~~ 449 (476)
..+.+|+++...+| ++|++++++.|.++.+.
T Consensus 390 g~~~~~~~~~iRis~~~~~t~g~~~edi~~~~~~l~~~l~~ 430 (483)
T 1rv3_A 390 GDKSALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIEL 430 (483)
T ss_dssp SCSCTTSCCEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCcCCCCceEEeecCCcccCCCCHHHHHHHHHHHHHHHHh
Confidence 13589999876666 99999999999998765
No 100
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=99.91 E-value=3.2e-23 Score=212.82 Aligned_cols=298 Identities=11% Similarity=-0.000 Sum_probs=204.8
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCC-
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCL- 214 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~- 214 (476)
+..++++++.+++.+..+.+. ...+++|+||++|+..++.+..+ ||+.|+++.++|.++...++..|++++.+|++
T Consensus 81 g~~~lr~~ia~~~~~~~~~~~-~~~i~~t~g~~~al~~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~ 157 (418)
T 3rq1_A 81 GIPDFLCAAEKECFGNFRPEG-HIRSIATAGGTGGIHHLIHNYTE--PGDEVLTADWYWGAYRVICSDTGRTLVTYSLFD 157 (418)
T ss_dssp CCHHHHHHHHHHHHGGGCCSS-EEEEEEESHHHHHHHHHHHHHSC--TTCEEEEESSCCTHHHHHHHHTTCEEEEECSBC
T ss_pred ChHHHHHHHHHHHhcccCccc-cccEEECCchHHHHHHHHHHhcC--CCCEEEECCCCchhHHHHHHHcCCEEEEEeeeC
Confidence 457899999999877766542 23599999999999999988765 89999999999999999999999999999985
Q ss_pred CCCccCHHHHHHHHHc----CCCCcEEEEEeeC-CCccccccCHHH---HHHHHH------HhCCCCCceEEEEecCccc
Q 011842 215 ISGEIDCADFKAKLLQ----NKDKPAIINVNIG-TTVKGAVDDLDL---VIQTLE------ESGFTQDRFYIHCDGALFG 280 (476)
Q Consensus 215 ~~g~~D~~~Le~~l~~----~~~~p~~vv~t~g-tt~tG~id~l~~---I~~ia~------~~g~~~~~~~lhvD~a~~g 280 (476)
+++.+|+++|++++.+ +++ .+++++++ .|+||.+.|.++ |+++|+ +||+ ++++|++|.+
T Consensus 158 ~~~~~d~~~l~~~l~~~~~~~~~--~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~-----~li~De~y~~ 230 (418)
T 3rq1_A 158 EHNNFNHEAFQNRVNELAAKQTN--VVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNV-----IIGIDVAYLD 230 (418)
T ss_dssp TTSSBCHHHHHHHHHHHHHHCSE--EEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEE-----EEEEECTTGG
T ss_pred CCCCcCHHHHHHHHHHhhccCCC--EEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCe-----EEEEeccccc
Confidence 5578999999999975 332 37778888 899999987555 455555 8899 9999999976
Q ss_pred ccccccccCCC---CC-Ccccc-cEEEEcCCCCCC-CCCCceeEEe---ehhhhhhhcCCccccCCCCCcccCCCCChhH
Q 011842 281 LMMPFVKKAPK---VS-FKKPI-GSVSVSGHKFVG-CPMPCGVQIT---RMEHINVLSSNVEYLASRDATIMGSRNGHAP 351 (476)
Q Consensus 281 ~~~~~~~~~~~---~~-~~~~~-Dsi~~s~hK~l~-~p~~~G~l~~---~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~ 351 (476)
+........+. .. ..+.. .+++.|++|.++ .++++|++++ ++++++.+.....+.... ..+ ....
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~----~~~--~~~~ 304 (418)
T 3rq1_A 231 YSGEKDEVRAFFNKFSHLPKEILTCVCYSLSKGFTMYGQRVGAMIGISDDEEIADEFFEVNKSTSRA----TWS--NICR 304 (418)
T ss_dssp GSSCHHHHHGGGGGGTTCCTTEEEEEEEESTTTTTCCSSCCEEEEEEESSHHHHHHHHHHHHHHHHH----HTS--SCCH
T ss_pred ccCChHHHHHHHHHHHhcCCCceEEEEEeCCCCCcCcCCcceEEEEEeCCHHHHHHHHHHHHHHHhh----ccC--CCch
Confidence 65432111110 11 11111 266779999886 6799999998 666665553222221100 001 1123
Q ss_pred HHHHHHHHHhChh--------cHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecCCcHHHh-----hceeecc
Q 011842 352 IFLWYTLNRKGYK--------GFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERPQDEEFV-----RRWQLAC 418 (476)
Q Consensus 352 l~~~~~l~~~g~~--------g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~~~~~~-----~~~~l~~ 418 (476)
+.+.++...+... ..+++.++..++++++.+.|++.|+....+....++++..++..++. +++.+..
T Consensus 305 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~ 384 (418)
T 3rq1_A 305 PAMRTMANIVADPAKFKEYEAERNCYYQLIRDRADIFKQEAAQVGLPMLPYRGGFFITIPTDSANAICEELKKEHIYVIA 384 (418)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCSSSEEEEECTTHHHHHHHHHHTTEECEE
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCceEEEEcCCCCHHHHHHHHHhCCEEEec
Confidence 4444444444221 23355677788889999999988765443333334444454444333 2334445
Q ss_pred cCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 011842 419 QGNIAHVVVMPNVTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 419 ~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~ 450 (476)
.++.+|+++. .+|+++|+++++.|+++.+++
T Consensus 385 g~~~iRis~~-~~~~~~i~~~~~~l~~~l~~~ 415 (418)
T 3rq1_A 385 LANGIRIAAC-GIPKCQMTGLAEKIYNAMKSL 415 (418)
T ss_dssp CSSEEEEEGG-GSCHHHHTTHHHHHHHHHHHT
T ss_pred CCCCeEEEEe-cCCHHHHHHHHHHHHHHHHHH
Confidence 5678999965 579999999999999988764
No 101
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.91 E-value=2.1e-22 Score=205.69 Aligned_cols=272 Identities=13% Similarity=0.111 Sum_probs=199.1
Q ss_pred HHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHH----HHcCCeEEEEeC
Q 011842 138 RQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAA----RMYRMECVKVDC 213 (476)
Q Consensus 138 ~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~----~~~G~~v~~v~~ 213 (476)
.....++++++++++|.+ ..+++++|++|+..++.++.. |++.|+++++.|.++...+ +..|++++.++.
T Consensus 63 ~~~~~~l~~~la~~~g~~----~~i~~~sG~~a~~~~l~~~~~--~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~ 136 (398)
T 2rfv_A 63 NPTTDALEKKLAVLERGE----AGLATASGISAITTTLLTLCQ--QGDHIVSASAIYGCTHAFLSHSMPKFGINVRFVDA 136 (398)
T ss_dssp CHHHHHHHHHHHHHHTCS----EEEEESSHHHHHHHHHHHHCC--TTCEEEEESSSCHHHHHHHHTHHHHTTCEEEEECT
T ss_pred ChHHHHHHHHHHHHhCCC----cEEEECCHHHHHHHHHHHHhC--CCCEEEEcCCCcccHHHHHHHHHHHcCCEEEEeCC
Confidence 366778888999999986 267788889999999988765 8999999999999988776 778999999997
Q ss_pred CCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCC
Q 011842 214 LISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVS 293 (476)
Q Consensus 214 ~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~ 293 (476)
+ |+++|++++.+++ .+|++++++|++|.+.|+++|+++|++||+ ++|+|++|+.+.++. . +.
T Consensus 137 ~-----d~~~l~~~i~~~~---~~v~~~~~~nptG~~~~l~~i~~l~~~~~~-----~li~De~~~~~~~~~--~---~~ 198 (398)
T 2rfv_A 137 A-----KPEEIRAAMRPET---KVVYIETPANPTLSLVDIETVAGIAHQQGA-----LLVVDNTFMSPYCQQ--P---LQ 198 (398)
T ss_dssp T-----SHHHHHHHCCTTE---EEEEEESSBTTTTBCCCHHHHHHHHHHTTC-----EEEEECTTTCTTTCC--G---GG
T ss_pred C-----CHHHHHHhcCCCC---eEEEEECCCCCCCcccCHHHHHHHHHHcCC-----EEEEECCCcccccCC--c---hh
Confidence 5 8999999987543 488889999999999999999999999999 999999998655431 0 11
Q ss_pred CcccccEEEEcCCCCCCCCCC--ceeEEeehhhhh-hhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHH
Q 011842 294 FKKPIGSVSVSGHKFVGCPMP--CGVQITRMEHIN-VLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEV 370 (476)
Q Consensus 294 ~~~~~Dsi~~s~hK~l~~p~~--~G~l~~~~~~~~-~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~ 370 (476)
..+|+++.++||+++.|.. +|+++++++.++ .+........ .++ ...+.+|++++.+ +.+..++
T Consensus 199 --~~~di~~~s~sK~~~~~g~~~~G~~~~~~~~~~~~~~~~~~~~~------~~~---~~~~~~~~~~~~l--~~~~~~~ 265 (398)
T 2rfv_A 199 --LGADIVVHSVTKYINGHGDVIGGIIVGKQEFIDQARFVGLKDIT------GGC---MSPFNAWLTLRGV--KTLGIRM 265 (398)
T ss_dssp --GTCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTHHHHTT------CCC---CCHHHHHHHHHHH--TTHHHHH
T ss_pred --hCCcEEEEeCcccccCCCCceEEEEEECHHHHHHHHHHHHHhCC------CCC---CCHHHHHHHHhhh--hhHHHHH
Confidence 2379999999999876554 499999987664 3321111100 111 1245666666655 3456667
Q ss_pred HHHHHHHHHHHHHHHhcCCeE-e-------------ec----CCeeEEEEecCCc----HHHhhcee---e--c------
Q 011842 371 QKCLRNAHYLKDRLLDAGISA-M-------------LN----ELSSTVVFERPQD----EEFVRRWQ---L--A------ 417 (476)
Q Consensus 371 ~~~~~~a~~l~~~L~~~g~~~-~-------------~~----~~~~iv~f~~~~~----~~~~~~~~---l--~------ 417 (476)
++..++++++.+.|++.+... + .. ...+++.|..++. ..+.+.+. + .
T Consensus 266 ~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~G~~~~ 345 (398)
T 2rfv_A 266 ERHCENALKIARFLEGHPSITRVYYPGLSSHPQYELGQRQMSLPGGIISFEIAGGLEAGRRMINSVELCLLAVSLGDTET 345 (398)
T ss_dssp HHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTHHHHHHHHHTTCSSSEECSCCSSSSC
T ss_pred HHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCCHHHHHHHHHhCCcceeccCCCCcce
Confidence 777888888999988764211 1 01 1357788877642 12333221 1 0
Q ss_pred ----c----------------c--CCEEEEEEcCCCCHHHHHHHHHHHHHH
Q 011842 418 ----C----------------Q--GNIAHVVVMPNVTIDKLDDFLNELIEN 446 (476)
Q Consensus 418 ----~----------------~--~~~lRv~~~~~~T~edid~~~~~l~~~ 446 (476)
| . .+.+|+++...+|+++|++++++|+++
T Consensus 346 li~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 396 (398)
T 2rfv_A 346 LIQHPASMTHSPVAPEERLKAGITDGLIRLSVGLEDPEDIINDLEHAIRKA 396 (398)
T ss_dssp EEECHHHHTSSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred eeecccccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHhh
Confidence 0 0 478999999999999999999999764
No 102
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=99.91 E-value=1.3e-22 Score=206.65 Aligned_cols=295 Identities=11% Similarity=0.026 Sum_probs=208.5
Q ss_pred hHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCC-C
Q 011842 137 SRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCL-I 215 (476)
Q Consensus 137 ~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~-~ 215 (476)
..++++++.+++.+.+|.+.+...+++|+||++|+..++.++.. |++.|+++.++|.++...++..|++++.+|++ +
T Consensus 68 ~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~ 145 (399)
T 1c7n_A 68 TEEYKKTVKKWMKDRHQWDIQTDWIINTAGVVPAVFNAVREFTK--PGDGVIIITPVYYPFFMAIKNQERKIIECELLEK 145 (399)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCC--TTCEEEECSSCCTHHHHHHHTTTCEEEECCCEEE
T ss_pred cHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHHHHHHHhcC--CCCEEEEcCCCcHhHHHHHHHcCCEEEecccccC
Confidence 46899999999999888554445699999999999999988765 88999999999999999999999999999985 3
Q ss_pred CC--ccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCcccccccccccCC
Q 011842 216 SG--EIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAP 290 (476)
Q Consensus 216 ~g--~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~ 290 (476)
+| .+|+++|++++.+. ++.+|++++++|++|.+.| +++|+++|++||+ ++++|++|+++.+......+
T Consensus 146 ~g~~~~d~~~l~~~l~~~--~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~-----~li~De~~~~~~~~g~~~~~ 218 (399)
T 1c7n_A 146 DGYYTIDFQKLEKLSKDK--NNKALLFCSPHNPVGRVWKKDELQKIKDIVLKSDL-----MLWSDEIHFDLIMPGYEHTV 218 (399)
T ss_dssp TTEEECCHHHHHHHHTCT--TEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHSSC-----EEEEECTTTTCBCTTCCCCC
T ss_pred CCCEEEcHHHHHHHhccC--CCcEEEEcCCCCCCCcCcCHHHHHHHHHHHHHcCC-----EEEEEccccccccCCCCccc
Confidence 33 59999999999732 2347777899999999988 9999999999999 99999999876543211111
Q ss_pred CCCCcc---cccEEEEcCCCCCC-CCCCceeEEeeh-hhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHh--Ch
Q 011842 291 KVSFKK---PIGSVSVSGHKFVG-CPMPCGVQITRM-EHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRK--GY 363 (476)
Q Consensus 291 ~~~~~~---~~Dsi~~s~hK~l~-~p~~~G~l~~~~-~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~--g~ 363 (476)
...+.. ..+++..+++|+++ .++++|++++++ ++++.+.....+. + .++.+ .+.++++...+ +.
T Consensus 219 ~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~~~-----~-~~~~~---~~~~~a~~~~l~~~~ 289 (399)
T 1c7n_A 219 FQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKNPDIRERFTKSRDAT-----S-GMPFT---TLGYKACEICYKECG 289 (399)
T ss_dssp GGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCHHHHHHHHHHHHHT-----T-CCCCC---HHHHHHHHHHHHHCH
T ss_pred HHHcCccccCcEEEEEeChhhccccchheEEEEECCHHHHHHHHHHHhhc-----c-cCCCC---HHHHHHHHHHHhCCh
Confidence 112211 24577889999987 667899999975 4655543211111 0 01111 33344333333 34
Q ss_pred hcHHHHHHHHHHHHHHHHHHHHh-cCCeEeecCCeeEE-EEecCC----cHHHhh------ceeecc-------cCCEEE
Q 011842 364 KGFQKEVQKCLRNAHYLKDRLLD-AGISAMLNELSSTV-VFERPQ----DEEFVR------RWQLAC-------QGNIAH 424 (476)
Q Consensus 364 ~g~~~~~~~~~~~a~~l~~~L~~-~g~~~~~~~~~~iv-~f~~~~----~~~~~~------~~~l~~-------~~~~lR 424 (476)
+.+++..++..++++++.+.|++ .+...+.++..+++ .+..+. ..++.+ ++.+.. ..+.+|
T Consensus 290 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iR 369 (399)
T 1c7n_A 290 KWLDGCIKVIDKNQRIVKDFFEVNHPEIKAPLIEGTYLQWIDFRALKMDHKAMEEFMIHKAQIFFDEGYIFGDGGIGFER 369 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCTTSBCCCCSBSSEEEEECGGGCCCHHHHHHHHHHTTCCCCEEGGGGCGGGTTEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCCCeEecCCceEEEEEEcccCCCCHHHHHHHHHHhCCEEEeCccccCCCCCCeEE
Confidence 55777888889999999999998 53233334444444 455542 222221 333321 246899
Q ss_pred EEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 011842 425 VVVMPNVTIDKLDDFLNELIENRSTWY 451 (476)
Q Consensus 425 v~~~~~~T~edid~~~~~l~~~~~~~~ 451 (476)
++++. ++++|+.+++.|.++.+++.
T Consensus 370 is~~~--~~~~l~~~l~~l~~~l~~~~ 394 (399)
T 1c7n_A 370 INLAA--PSSVIQESLERLNKALKDLK 394 (399)
T ss_dssp EECCS--CHHHHHHHHHHHHHHHHHHC
T ss_pred EEecc--CHHHHHHHHHHHHHHHHHHH
Confidence 98874 48999999999999887764
No 103
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.91 E-value=6.3e-23 Score=206.80 Aligned_cols=288 Identities=11% Similarity=-0.051 Sum_probs=195.2
Q ss_pred HHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHh-hCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCcc
Q 011842 141 EVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGRE-VFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGEI 219 (476)
Q Consensus 141 e~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~-~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~ 219 (476)
..++++.+++++|.+ .+++|+|||+|+..++.+++. ..|++.|+++.++|.++..+++..|++++.+++++++.+
T Consensus 34 ~~~l~~~la~~~~~~----~v~~~~ggt~al~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 109 (375)
T 2fnu_A 34 SLLFEEALCEFLGVK----HALVFNSATSALLTLYRNFSEFSADRNEIITTPISFVATANMLLESGYTPVFAGIKNDGNI 109 (375)
T ss_dssp HHHHHHHHHHHHTCS----EEEEESCHHHHHHHHHHHSSCCCTTSCEEEECSSSCTHHHHHHHHTTCEEEECCBCTTSSB
T ss_pred HHHHHHHHHHHhCCC----eEEEeCCHHHHHHHHHHHhcccCCCCCEEEECCCccHhHHHHHHHCCCEEEEeccCCCCCC
Confidence 345666677888876 399999999999999988731 238899999999999999999999999999999887889
Q ss_pred CHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCccccc
Q 011842 220 DCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKPIG 299 (476)
Q Consensus 220 D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~~D 299 (476)
|+++|++++.+++ .+|+++++ +|.+.|+++|.++|++||+ ++|+|++|+.+..+.... +.....++
T Consensus 110 d~~~l~~~i~~~~---~~v~~~~~---tG~~~~l~~i~~l~~~~~~-----~li~D~a~~~~~~~~~~~---~~~~~~i~ 175 (375)
T 2fnu_A 110 DELALEKLINERT---KAIVSVDY---AGKSVEVESVQKLCKKHSL-----SFLSDSSHALGSEYQNKK---VGGFALAS 175 (375)
T ss_dssp CGGGSGGGCCTTE---EEEEEECG---GGCCCCHHHHHHHHHHHTC-----EEEEECTTCTTCEETTEE---TTSSSSEE
T ss_pred CHHHHHhhcCcCc---eEEEEeCC---cCCccCHHHHHHHHHHcCC-----EEEEECccccCCeECCee---ccccCCeE
Confidence 9999999886543 36666665 8999999999999999999 999999998655432211 11111266
Q ss_pred EEEEcCCCCCCCCCCceeEEee--hhhhhhhcCCccccCC-C-CC----cccCCCCChhHHHHHHHHHHhChhcHHHHHH
Q 011842 300 SVSVSGHKFVGCPMPCGVQITR--MEHINVLSSNVEYLAS-R-DA----TIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQ 371 (476)
Q Consensus 300 si~~s~hK~l~~p~~~G~l~~~--~~~~~~l~~~~~yl~~-~-~~----~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~ 371 (476)
+.++++||+++ | ++|+++++ +++.+.+.....+... . .. ...+.+.+...+..+.++. ..+++++..+
T Consensus 176 ~~s~s~~K~~~-~-g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~--~~~~~~~~~~ 251 (375)
T 2fnu_A 176 VFSFHAIKPIT-T-AEGGAVVTNDSELHEKMKLFRSHGMLKKDFFEGEVKSIGHNFRLNEIQSALGLS--QLKKAPFLMQ 251 (375)
T ss_dssp EEECCTTSSSC-C-SSCEEEEESCHHHHHHHHHHTBTTEEESSSSCEEESSCCCBCCCCHHHHHHHHH--HHTTHHHHHH
T ss_pred EEeCCCCCCcc-c-cCceEEEeCCHHHHHHHHHHHhcCCccccccccccccccccCCCCHHHHHHHHH--HHHHHHHHHH
Confidence 77788889995 5 78998884 3454443211110000 0 00 0011111222333333332 2467888999
Q ss_pred HHHHHHHHHHHHHHhcCCeEeecC-----Ce-eEEEEecC-----CcHHHh-----hceeec--c---------------
Q 011842 372 KCLRNAHYLKDRLLDAGISAMLNE-----LS-STVVFERP-----QDEEFV-----RRWQLA--C--------------- 418 (476)
Q Consensus 372 ~~~~~a~~l~~~L~~~g~~~~~~~-----~~-~iv~f~~~-----~~~~~~-----~~~~l~--~--------------- 418 (476)
+..++++++.+.|++.+...+..+ .. .++.+..+ ...++. +++.+. +
T Consensus 252 ~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~~~~p~~~~~~~~~~~~~ 331 (375)
T 2fnu_A 252 KREEAALTYDRIFKDNPYFTPLHPLLKDKSSNHLYPILMHQKFFTCKKLILESLHKRGILAQVHYKPIYQYQLYQQLFNT 331 (375)
T ss_dssp HHHHHHHHHHHHHTTCSSEEESGGGCSSCCCCSCEEEEECGGGGGGHHHHHHHHHHTTEECBCCCCCGGGSHHHHHHHCC
T ss_pred HHHHHHHHHHHHhhcCCCccccCCCCCCCcceEEEEEEeCccccchHHHHHHHHHHCCCCccccccccccchhhhcCCCc
Confidence 999999999999999743333322 12 22233333 222222 222222 0
Q ss_pred ---------cCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 011842 419 ---------QGNIAHVVVMPNVTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 419 ---------~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~ 450 (476)
..+.+|+++++.+|++||++++++|+++.+++
T Consensus 332 ~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~~~~~ 372 (375)
T 2fnu_A 332 APLKSAEDFYHAEISLPCHANLNLESVQNIAHSVLKTFESF 372 (375)
T ss_dssp CCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred cCChHHHHHHhCEEEecCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 01579999999999999999999999987653
No 104
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.91 E-value=5.3e-23 Score=211.34 Aligned_cols=289 Identities=15% Similarity=0.100 Sum_probs=196.1
Q ss_pred HHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHH-HhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCC-
Q 011842 138 RQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVG-REVFPDGILYASRESHYSVFKAARMYRMECVKVDCLI- 215 (476)
Q Consensus 138 ~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa-~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~- 215 (476)
.++.+++++++++++|.+. .+++++||+|+..++.++ .. +++.|+++.++|.++..+++..|++++.+++++
T Consensus 41 ~~l~~~l~~~la~~~g~~~----~i~~~~gt~al~~~~~~~~~~--~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 114 (418)
T 2c81_A 41 ESMERKFAKAFADFNGVPY----CVPTTSGSTALMLALEALGIG--EGDEVIVPSLTWIATATAVLNVNALPVFVDVEAD 114 (418)
T ss_dssp CCHHHHHHHHHHHHHTCSE----EEEESCHHHHHHHHHHHTTCC--TTCEEEEESSSCTHHHHHHHHTTCEEEEECBCTT
T ss_pred HHHHHHHHHHHHHHhCCCc----EEEeCCHHHHHHHHHHHcCCC--CcCEEEECCCccHhHHHHHHHcCCEEEEEecCCC
Confidence 4667788888999999862 788889999999998887 43 889999999999999999999999999999986
Q ss_pred CCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCc
Q 011842 216 SGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFK 295 (476)
Q Consensus 216 ~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~ 295 (476)
++.+|+++|++++++++ .+|+++ +++|.+.|+++|.++|++||+ ++|+|++|+.+......... ..
T Consensus 115 ~~~~d~~~l~~~i~~~~---~~v~~~---~~~G~~~~~~~i~~~~~~~~~-----~li~D~a~~~~~~~~~~~~~--~~- 180 (418)
T 2c81_A 115 TYCIDPQLIKSAITDKT---KAIIPV---HLFGSMANMDEINEIAQEHNL-----FVIEDCAQSHGSVWNNQRAG--TI- 180 (418)
T ss_dssp TCSBCHHHHGGGCCTTE---EEECCB---CCTTCCCCHHHHHHHHHHTTC-----EEEEECTTCTTCEETTEETT--SS-
T ss_pred CCCcCHHHHHHhhCCCC---eEEEEe---CCcCCcccHHHHHHHHHHCCC-----EEEEECcccccCccCCEecc--cc-
Confidence 78899999999886543 366554 467999999999999999999 99999999876521111111 11
Q ss_pred ccccEEEEcCCCCCCCCCCceeEEee-hhhhhhhcCCcc---------------ccC-CCCCcccCCCCChhHHHHHHHH
Q 011842 296 KPIGSVSVSGHKFVGCPMPCGVQITR-MEHINVLSSNVE---------------YLA-SRDATIMGSRNGHAPIFLWYTL 358 (476)
Q Consensus 296 ~~~Dsi~~s~hK~l~~p~~~G~l~~~-~~~~~~l~~~~~---------------yl~-~~~~~~~~sr~~~~~l~~~~~l 358 (476)
..++++++++||+++.+ ++|+++++ +++.+.+..... |.. .....+.+.......+..+..+
T Consensus 181 ~~~~~~s~s~~K~~~~g-~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~ 259 (418)
T 2c81_A 181 GDIGAFSCQQGKVLTAG-EGGIIVTKNPRLFELIQQLRADSRVYCDDSSELMHGDMQLVKKGDIQGSNYCLSEFQSAILL 259 (418)
T ss_dssp SSEEEEECCTTSSSCSS-SCEEEEESCHHHHHHHHHHHBTTEEECSCGGGCCTTCBSEEECCSSCCCBCCCCHHHHHHHH
T ss_pred cceEEEeccCCcccCCC-CeEEEEECCHHHHHHHHHHHHhCccccccccccccchhhccccccccCcCCCcCHHHHHHHH
Confidence 12566666779999874 88888885 455443321101 110 0000111111111122222222
Q ss_pred HHhChhcHHHHHHHHHHHHHHHHHHHHhc-CCeEeecC-C----e-eEEEEecC-------CcHHH-----hh-cee---
Q 011842 359 NRKGYKGFQKEVQKCLRNAHYLKDRLLDA-GISAMLNE-L----S-STVVFERP-------QDEEF-----VR-RWQ--- 415 (476)
Q Consensus 359 ~~~g~~g~~~~~~~~~~~a~~l~~~L~~~-g~~~~~~~-~----~-~iv~f~~~-------~~~~~-----~~-~~~--- 415 (476)
...+.+++..++..++++++.+.|++. ++....++ . . .++.+..+ +..++ .+ ++.
T Consensus 260 --~~l~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gI~~~~ 337 (418)
T 2c81_A 260 --DQLQELDDKNAIREKNAMFLNDALSKIDGIKVMKRPPQVSRQTYYGYVFRFDPVKFGGLNADQFCEILREKLNMGTFY 337 (418)
T ss_dssp --HHHTTHHHHHHHHHHHHHHHHHHHTTSTTEEECCCCTTEEECCCSEEEEEECGGGTTTCCHHHHHHHHHHHHTCCTTT
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHhccCCCcccCCCCCCCcccccEEEEEEEccccccccCHHHHHHHHHHcCCCCccc
Confidence 223567888888899999999999887 44333223 2 1 24445544 22222 12 333
Q ss_pred ecc--------------------------------c---------CCEEEEEEcCCC-CHHHHHHHHHHHHHHHHH
Q 011842 416 LAC--------------------------------Q---------GNIAHVVVMPNV-TIDKLDDFLNELIENRST 449 (476)
Q Consensus 416 l~~--------------------------------~---------~~~lRv~~~~~~-T~edid~~~~~l~~~~~~ 449 (476)
+.. . .+.+|+++++.+ |++|||+++++|+++.++
T Consensus 338 v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~gt~edi~~~~~~l~~~~~~ 413 (418)
T 2c81_A 338 LHPPYLPVHKNPLFCPWTKNRYLKSVRKTEAYWRGLHYPVSERASGQSIVIHHAILLAEPSHLSLLVDAVAELARK 413 (418)
T ss_dssp EECCCCCGGGCTTCCGGGCTTSCHHHHCCHHHHHTCCCHHHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHHHHHHT
T ss_pred ccccccccccCchhcccccccccccccccccccccCCChHHHHHHhCEEEecCCccCCCHHHHHHHHHHHHHHHHh
Confidence 210 0 147999999999 999999999999988754
No 105
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=99.91 E-value=1.6e-22 Score=207.33 Aligned_cols=297 Identities=11% Similarity=0.049 Sum_probs=203.4
Q ss_pred hHHHHHHHHHHHHHH------cCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEE
Q 011842 137 SRQFEVGVLDWFARL------WELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVK 210 (476)
Q Consensus 137 ~~~le~~~~~~la~l------~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~ 210 (476)
..++++++.+++.+. .|++.+...+++|+|+|+|+..++.++.. |++.|+++.++|.++..+++..|++++.
T Consensus 77 ~~~lr~~la~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~al~~~~~~l~~--~gd~vl~~~p~y~~~~~~~~~~g~~~~~ 154 (416)
T 1bw0_A 77 SPEAREAVATWWRNSFVHKEELKSTIVKDNVVLCSGGSHGILMAITAICD--AGDYALVPQPGFPHYETVCKAYGIGMHF 154 (416)
T ss_dssp CHHHHHHHHHHHHHHHCCSTTTGGGCCGGGEEEESHHHHHHHHHHHHHCC--TTCEEEEEESCCTHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHHHHhhhcccccCCCCCCcceEEEeCChHHHHHHHHHHhCC--CCCEEEEcCCCcHhHHHHHHHcCcEEEE
Confidence 458888888888742 34333344699999999999999888755 8999999999999999999999999999
Q ss_pred EeCCCC--CccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCcccccccc
Q 011842 211 VDCLIS--GEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPF 285 (476)
Q Consensus 211 v~~~~~--g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~ 285 (476)
+|++++ +.+|+++|++++.+++ .+|++++++|++|.+.| +++|+++|++||+ ++++|++|+.+.+..
T Consensus 155 v~~~~~~~~~~d~~~l~~~l~~~~---~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~-----~li~De~~~~~~~~g 226 (416)
T 1bw0_A 155 YNCRPENDWEADLDEIRRLKDDKT---KLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRL-----PLFSDEIYAGMVFKG 226 (416)
T ss_dssp EEEEGGGTTEECHHHHHHHCCTTE---EEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTC-----CEEEECTTTTCBCCS
T ss_pred eecCcccCCCCCHHHHHHHhccCC---eEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCC-----EEEEEccccccccCC
Confidence 998643 6799999999986543 47778889999999988 9999999999999 999999998755432
Q ss_pred c----ccCCCCCCccc-ccEEEEcCCCCCC-CCCCceeEEeehh--hhhhhcCC-ccccCCCCCcccCCCCChhHHHHHH
Q 011842 286 V----KKAPKVSFKKP-IGSVSVSGHKFVG-CPMPCGVQITRME--HINVLSSN-VEYLASRDATIMGSRNGHAPIFLWY 356 (476)
Q Consensus 286 ~----~~~~~~~~~~~-~Dsi~~s~hK~l~-~p~~~G~l~~~~~--~~~~l~~~-~~yl~~~~~~~~~sr~~~~~l~~~~ 356 (476)
. ...+...+... .++++.+++|+++ .++++|+++++++ +++.+... ..+. ...++.+......+..
T Consensus 227 ~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~Glr~G~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~a~~~ 301 (416)
T 1bw0_A 227 KDPNATFTSVADFETTVPRVILGGTAKNLVVPGWRLGWLLYVDPHGNGPSFLEGLKRVG-----MLVCGPCTVVQAALGE 301 (416)
T ss_dssp SCTTCCCCCTTSSCCSCCEEEEEESTTTTSCGGGCCEEEEEECTTCSCHHHHHHHHHHH-----HHHTCSCHHHHHHHHH
T ss_pred CCCCCCccCHHHccCCCcEEEEecchhhCCCCCceEEEEEeeCchhhHHHHHHHHHHHh-----ccccCCCcHHHHHHHH
Confidence 2 11111122122 2466778999975 4578999999874 33222100 0000 0011222122222333
Q ss_pred HHHHhChhcHHHHHHHHHHHHHHHHHHHHhc-CCeEeecCCeeEEEEecC--------CcHHHh------hceeecc---
Q 011842 357 TLNRKGYKGFQKEVQKCLRNAHYLKDRLLDA-GISAMLNELSSTVVFERP--------QDEEFV------RRWQLAC--- 418 (476)
Q Consensus 357 ~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~-g~~~~~~~~~~iv~f~~~--------~~~~~~------~~~~l~~--- 418 (476)
+++....+.+++..++..++++++.+.|++. ++....+..++.+.+..+ +..++. +++.+..
T Consensus 302 ~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~ 381 (416)
T 1bw0_A 302 ALLNTPQEHLDQIVAKIEESAMYLYNHIGECIGLAPTMPRGAMYLMSRIDLEKYRDIKTDVEFFEKLLEEENVQVLPGTI 381 (416)
T ss_dssp HHHSSCHHHHHHHHHHHHHHHHHHHHHHTTSTTEEECCCCBTTEEEEEECGGGBSSCCSHHHHHHHHHHHHCEECEEGGG
T ss_pred HHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCeeEEEEEeCCHHHcCCCCCHHHHHHHHHHHCCEEEecccc
Confidence 3433335567888899999999999999987 443333334555555543 122222 2333321
Q ss_pred --cCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 011842 419 --QGNIAHVVVMPNVTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 419 --~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~ 450 (476)
..+.+|+++. +++++|+..++.|.++.++.
T Consensus 382 f~~~~~iRis~~--~~~e~l~~~l~~l~~~l~~~ 413 (416)
T 1bw0_A 382 FHAPGFTRLTTT--RPVEVYREAVERIKAFCQRH 413 (416)
T ss_dssp GTCTTEEEEECC--SCHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Confidence 1468999884 78999999999999887653
No 106
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=99.91 E-value=1.9e-22 Score=212.37 Aligned_cols=325 Identities=10% Similarity=-0.061 Sum_probs=219.0
Q ss_pred chHHHHHHHHHhhCCCCCCcccCccchhhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHH-hhCCCcEE
Q 011842 109 DYGALAQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGR-EVFPDGIL 187 (476)
Q Consensus 109 ~~~~l~~~l~~~~n~~g~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~-~~~p~~~V 187 (476)
+...+..+.....+..+.....+....+..++++++.+++.+..|.+.+...+++|+|+++++..++.+.. . +++.|
T Consensus 108 p~~~~~~a~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~--~gd~V 185 (500)
T 3tcm_A 108 SADSISRAKQILAMIPGRATGAYSHSQGIHGLRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLLIRN--EKDGI 185 (500)
T ss_dssp CHHHHHHHHHHHTTSTTSCSSSCCCTTCCHHHHHHHHHHHHHHHSSCCCGGGEEEESSSHHHHHHHHHHHCCS--TTEEE
T ss_pred CHHHHHHHHHHHHcCCCCcCCCcCCCcChHHHHHHHHHHHHhhcCCCCCcccEEEcCCHHHHHHHHHHHHcCC--CCCEE
Confidence 33455555443333323122223333467899999999999988876555679999999999999988875 4 89999
Q ss_pred EecCCCchHHHHHHHHcCCeEEEEeCCCC--CccCHHHHHHHHHcC---CCCcEEEEEeeCCCcccccc---CHHHHHHH
Q 011842 188 YASRESHYSVFKAARMYRMECVKVDCLIS--GEIDCADFKAKLLQN---KDKPAIINVNIGTTVKGAVD---DLDLVIQT 259 (476)
Q Consensus 188 l~s~~~H~S~~~~~~~~G~~v~~v~~~~~--g~~D~~~Le~~l~~~---~~~p~~vv~t~gtt~tG~id---~l~~I~~i 259 (476)
+++.++|.++..+++.+|++++.++++++ +.+|+++|+++|++. ..++.+|++++++|+||.+- ++++|+++
T Consensus 186 lv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~~i~~l 265 (500)
T 3tcm_A 186 LVPIPQYPLYSASIALHGGALVPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKF 265 (500)
T ss_dssp EEEESCCTHHHHHHHHTTCEEEEEECBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHHHHHHHH
T ss_pred EEeCCCcHhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHHHHHHHH
Confidence 99999999999999999999999998754 589999999999862 22345777889999999994 47788888
Q ss_pred HHHhCCCCCceEEEEecCccccccccc-ccCCCC----CC---ccccc-EEEEcCCCCC-C-CCCCceeEEe---ehhhh
Q 011842 260 LEESGFTQDRFYIHCDGALFGLMMPFV-KKAPKV----SF---KKPIG-SVSVSGHKFV-G-CPMPCGVQIT---RMEHI 325 (476)
Q Consensus 260 a~~~g~~~~~~~lhvD~a~~g~~~~~~-~~~~~~----~~---~~~~D-si~~s~hK~l-~-~p~~~G~l~~---~~~~~ 325 (476)
|++||+ ++++|++|+.+.+... ...+.. ++ ...+. ++..|++|.+ + +++++|++++ +++++
T Consensus 266 a~~~~~-----~li~Deay~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~ 340 (500)
T 3tcm_A 266 CKNEGL-----VLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFSAPVR 340 (500)
T ss_dssp HHHHTC-----EEEEECTTTTCBCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGGGCCEEEEEESCCTTHH
T ss_pred HHHcCC-----EEEEecCccccccCCCCCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCccceEEEEEeCCCHHHH
Confidence 999999 9999999987665321 111100 01 11233 4456899987 2 5788999998 66665
Q ss_pred hhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhC------------hhcHHHHHHHHHHHHHHHHHHHHhcCCeEee
Q 011842 326 NVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKG------------YKGFQKEVQKCLRNAHYLKDRLLDAGISAML 393 (476)
Q Consensus 326 ~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g------------~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~ 393 (476)
+.+...... ..+. ..+.++++...+. .+..+++.+++.+++++|.+.|++.+...+.
T Consensus 341 ~~l~~~~~~--------~~~~---~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~ 409 (500)
T 3tcm_A 341 EQIYKIASV--------NLCS---NITGQILASLVMNPPKASDESYASYKAEKDGILASLARRAKALEHAFNKLEGITCN 409 (500)
T ss_dssp HHHHHHHHT--------TCCC---CHHHHHHHHHHHSCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEECC
T ss_pred HHHHHHHhc--------ccCC---CHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEe
Confidence 554321111 0111 1233333333321 1234566778888999999999998434444
Q ss_pred cCCeeEEEE---ecCCc-------------H----HHh--hceeec--------ccCCEEEEEEcCCCCHHHHHHHHHHH
Q 011842 394 NELSSTVVF---ERPQD-------------E----EFV--RRWQLA--------CQGNIAHVVVMPNVTIDKLDDFLNEL 443 (476)
Q Consensus 394 ~~~~~iv~f---~~~~~-------------~----~~~--~~~~l~--------~~~~~lRv~~~~~~T~edid~~~~~l 443 (476)
++..++++| ..|.. . .+. .+..+. .....+|+++. +++++|+.+++.|
T Consensus 410 ~~~g~~~~~~~~~lp~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~i~~l 487 (500)
T 3tcm_A 410 EAEGAMYVFPQICLPQKAIEAAKAANKAPDAFYALRLLESTGIVVVPGSGFGQVPGTWHFRCTIL--PQEDKIPAVISRF 487 (500)
T ss_dssp CCCBTTEECCEECCCHHHHHHHHHHTSCHHHHHHHHHHHHHCEECEESTTTCCCTTCCBEEEESC--SCTTTHHHHHHHH
T ss_pred cCCeEEEEeeeecCchhhHHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEEC--CCHHHHHHHHHHH
Confidence 555544444 22211 1 111 123332 12357999988 8999999999999
Q ss_pred HHHHHHHHhc
Q 011842 444 IENRSTWYED 453 (476)
Q Consensus 444 ~~~~~~~~~~ 453 (476)
.++.+++++.
T Consensus 488 ~~~~~~~~~~ 497 (500)
T 3tcm_A 488 TVFHEAFMSE 497 (500)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9998887653
No 107
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.91 E-value=1.8e-22 Score=205.88 Aligned_cols=288 Identities=14% Similarity=0.052 Sum_probs=201.4
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCc
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGE 218 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~ 218 (476)
+...++++.+++++|.+ ...++|+ |+++|..++.++....|++.|+++.++|.++...++..|++++.+|.+
T Consensus 91 ~~~~~l~~~la~~~~~~---~~i~~~s-G~~a~~~~~~~l~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~---- 162 (401)
T 2bwn_A 91 AYHRRLEAEIAGLHQKE---AALVFSS-AYNANDATLSTLRVLFPGLIIYSDSLNHASMIEGIKRNAGPKRIFRHN---- 162 (401)
T ss_dssp HHHHHHHHHHHHHTTCS---EEEEESC-HHHHHHHHHHHHHHHSTTCEEEEETTCCHHHHHHHHHSCCCEEEECTT----
T ss_pred HHHHHHHHHHHHHhCCC---cEEEECC-cHHHHHHHHHHHhcCCCCCEEEECchhhHHHHHHHHHcCCeEEEEcCC----
Confidence 34455667778888864 2355654 555888887765433489999999999999999999999999999975
Q ss_pred cCHHHHHHHHHcCC-CCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccc-cccccC-CCCCCc
Q 011842 219 IDCADFKAKLLQNK-DKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMM-PFVKKA-PKVSFK 295 (476)
Q Consensus 219 ~D~~~Le~~l~~~~-~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~-~~~~~~-~~~~~~ 295 (476)
|+++|++.+++.. .++.+|+++++++++|.+.|+++|.++|++||+ ++++|++|+.+.+ +..... ......
T Consensus 163 -d~~~le~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~-----~li~Dea~~~g~~~~~g~~~~~~~~~~ 236 (401)
T 2bwn_A 163 -DVAHLRELIAADDPAAPKLIAFESVYSMDGDFGPIKEICDIAEEFGA-----LTYIDEVHAVGMYGPRGAGVAERDGLM 236 (401)
T ss_dssp -CHHHHHHHHHHSCTTSCEEEEEESBCTTTCCBCCHHHHHHHHHHHTC-----EEEEECTTTTTTSSTTSCCHHHHHTCG
T ss_pred -CHHHHHHHHHhhccCCceEEEEecCcCCCCCcCCHHHHHHHHHHcCC-----EEEEeccccccccCCCCceeeeccCcc
Confidence 8999999998543 245688899999999999999999999999999 9999999984432 211110 001112
Q ss_pred ccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcC-CccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHH
Q 011842 296 KPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSS-NVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCL 374 (476)
Q Consensus 296 ~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~-~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~ 374 (476)
+..|.+..+++|+++.|. |+++.++++.+.+.. ...|... .++.+ .....+.++++.+...++++..++..
T Consensus 237 ~~~~i~~~s~sK~~~~~G--G~~~~~~~~~~~l~~~~~~~~~~-----~~~~~-~~~~a~~~al~~~~~~~~~~~~~~~~ 308 (401)
T 2bwn_A 237 HRIDIFNGTLAKAYGVFG--GYIAASARMVDAVRSYAPGFIFS-----TSLPP-AIAAGAQASIAFLKTAEGQKLRDAQQ 308 (401)
T ss_dssp GGCSEEEEESSSTTCSCC--EEEEECHHHHHHHHHHCHHHHTS-----BCCCH-HHHHHHHHHHHHHTSHHHHHHHHHHH
T ss_pred ccCcEEEeechhhccCCC--CEEecCHHHHHHHHHhCcCceec-----CCCCH-HHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 236888899999998532 888888766554432 1112111 11111 23344456666665556788899999
Q ss_pred HHHHHHHHHHHhcCCeEeecCCeeEEEEecCCc---HHHh------hceeecc--------cCCEEEEEEcCCCCHHHHH
Q 011842 375 RNAHYLKDRLLDAGISAMLNELSSTVVFERPQD---EEFV------RRWQLAC--------QGNIAHVVVMPNVTIDKLD 437 (476)
Q Consensus 375 ~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~~---~~~~------~~~~l~~--------~~~~lRv~~~~~~T~edid 437 (476)
++++++.+.|++.|+... ++.++++.|..+.. .++. +++.+.. ..+.+|++++..+|++||+
T Consensus 309 ~~~~~l~~~L~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~L~~~~gi~v~~~~~~~~~~~~~~iRis~~~~~t~~~i~ 387 (401)
T 2bwn_A 309 MHAKVLKMRLKALGMPII-DHGSHIVPVVIGDPVHTKAVSDMLLSDYGVYVQPINFPTVPRGTERLRFTPSPVHDLKQID 387 (401)
T ss_dssp HHHHHHHHHHHHHTCCBC-CCSSSCEEEECCCHHHHHHHHHHHHHHHCEECCEECTTTSCTTCCEEEECCCTTSCHHHHH
T ss_pred HHHHHHHHHHHHCCCccc-CCCCCeEEEEeCChHHHHHHHHHHHhcCCEEEeecCCCCCCCCCceEEEEeeCCCCHHHHH
Confidence 999999999998876443 44456777777641 2221 2333321 1258999999999999999
Q ss_pred HHHHHHHHHHHH
Q 011842 438 DFLNELIENRST 449 (476)
Q Consensus 438 ~~~~~l~~~~~~ 449 (476)
+++++|+++.++
T Consensus 388 ~~~~~l~~~~~~ 399 (401)
T 2bwn_A 388 GLVHAMDLLWAR 399 (401)
T ss_dssp HHHHHHHHHC--
T ss_pred HHHHHHHHHHHh
Confidence 999999987654
No 108
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.91 E-value=3.3e-22 Score=203.14 Aligned_cols=292 Identities=12% Similarity=0.037 Sum_probs=203.9
Q ss_pred HH-HHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCC
Q 011842 138 RQ-FEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLIS 216 (476)
Q Consensus 138 ~~-le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~ 216 (476)
.+ +++++.+++.+.+|.+.+...+++|+|+++|+..++.++.. |++.|+++.++|.++...++..|++++.+|++.+
T Consensus 66 ~~~lr~~la~~l~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~--~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~ 143 (390)
T 1d2f_A 66 NDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSELIRQWSE--TGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQ 143 (390)
T ss_dssp CHHHHHHHHHHHHHHSCCCCCGGGEEEESCHHHHHHHHHHHSSC--TTCEEEEEESCCHHHHHHHHHTTCEEEEEECEEC
T ss_pred hHHHHHHHHHHHHHhcCCCCCHHHEEEcCCHHHHHHHHHHHhcC--CCCEEEEcCCCcHHHHHHHHHCCCEEEEeecccC
Confidence 37 99999999999888554445699999999999999888764 8899999999999999999999999999998643
Q ss_pred ---CccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCcccccccccccCC
Q 011842 217 ---GEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAP 290 (476)
Q Consensus 217 ---g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~ 290 (476)
+.+|+++|++++.+. ++.+|++++++|++|.+.| +++|+++|++||+ ++++|++|+.+........+
T Consensus 144 ~~~~~~d~~~l~~~l~~~--~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~-----~li~De~~~~~~~~g~~~~~ 216 (390)
T 1d2f_A 144 ADGWFCDMGKLEAVLAKP--ECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGV-----RVISDEIHMDMVWGEQPHIP 216 (390)
T ss_dssp SSSEECCHHHHHHHHTST--TEEEEEEESSCTTTCCCCCTTHHHHHHHHHHHTTC-----EEEEECTTTTCBCSSSCCCC
T ss_pred CCccccCHHHHHHHhccC--CCeEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCC-----EEEEEccccccccCCCCCcC
Confidence 259999999999752 2447777889999999976 8999999999999 99999999876543211111
Q ss_pred CCCCccc-ccEEEEcCCCCCC-CCCCceeEEee-hhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHh--Chhc
Q 011842 291 KVSFKKP-IGSVSVSGHKFVG-CPMPCGVQITR-MEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRK--GYKG 365 (476)
Q Consensus 291 ~~~~~~~-~Dsi~~s~hK~l~-~p~~~G~l~~~-~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~--g~~g 365 (476)
....... .|. ..+++|+++ .++++|+++++ +++.+.+...... . .++ ++.+ .+.++++...+ +.+.
T Consensus 217 ~~~~~~~~~d~-~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~--~--~~~-~~~~---~~~~~a~~~~l~~~~~~ 287 (390)
T 1d2f_A 217 WSNVARGDWAL-LTSGSKSFNIPALTGAYGIIENSSSRDAYLSALKG--R--DGL-SSPS---VLALTAHIAAYQQGAPW 287 (390)
T ss_dssp GGGTCCSSEEE-EECSHHHHTCGGGCCEEEEECSHHHHHHHHHHHHT--T--SCC-CSCC---HHHHHHHHHHHHHCHHH
T ss_pred HHHcchhhHhh-ccCccHhhcccChhheEEEECCHHHHHHHHHHHhh--h--ccc-CCCC---HHHHHHHHHHHhcCHHH
Confidence 1112112 266 889999997 67789999986 4555544221110 0 001 1111 23333333332 2345
Q ss_pred HHHHHHHHHHHHHHHHHHHHh-c-CCeEeecCCeeEE-EEecCC----cHHH----h--hceeecc-------cCCEEEE
Q 011842 366 FQKEVQKCLRNAHYLKDRLLD-A-GISAMLNELSSTV-VFERPQ----DEEF----V--RRWQLAC-------QGNIAHV 425 (476)
Q Consensus 366 ~~~~~~~~~~~a~~l~~~L~~-~-g~~~~~~~~~~iv-~f~~~~----~~~~----~--~~~~l~~-------~~~~lRv 425 (476)
+++..++..++++++.+.|++ . ++. +.++..+++ .+..+. ..++ . ++..+.. ..+.+|+
T Consensus 288 ~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~~Ri 366 (390)
T 1d2f_A 288 LDALRIYLKDNLTYIADKMNAAFPELN-WQIPQSTYLAWLDLRPLNIDDNALQKALIEQEKVAIMPGYTYGEEGRGFVRL 366 (390)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCSSCC-CCCCSBCSEEEEECGGGCCCHHHHHHHHHHTTCEECEEGGGGCGGGTTEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCCE-EecCCccEEEEEEccccCCCHHHHHHHHHHHcCEEeeCccccCCCCCCeEEE
Confidence 677788888999999999988 5 443 334444443 455432 2222 2 1333321 2468999
Q ss_pred EEcCCCCHHHHHHHHHHHHHHHHHH
Q 011842 426 VVMPNVTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 426 ~~~~~~T~edid~~~~~l~~~~~~~ 450 (476)
++.. ++++|+.+++.|.++.+++
T Consensus 367 s~~~--~~~~l~~~l~~l~~~l~~~ 389 (390)
T 1d2f_A 367 NAGC--PRSKLEKGVAGLINAIRAV 389 (390)
T ss_dssp ECCS--CHHHHHHHHHHHHHHHHHH
T ss_pred EecC--CHHHHHHHHHHHHHHHHhh
Confidence 8875 5899999999998887653
No 109
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.91 E-value=5.4e-23 Score=207.56 Aligned_cols=285 Identities=13% Similarity=0.017 Sum_probs=193.1
Q ss_pred HHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHH-HhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCcc
Q 011842 141 EVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVG-REVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGEI 219 (476)
Q Consensus 141 e~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa-~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~ 219 (476)
..++++.+++++|.+ .+++|+|||+|+..++.++ .. +++.|+++.++|.++..+++..|++++.++++.++.+
T Consensus 40 ~~~l~~~la~~~~~~----~~~~~~~gt~a~~~~~~~~~~~--~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 113 (374)
T 3uwc_A 40 LEKFEKRFAALHNAP----HAIGVGTGTDALAMSFKMLNIG--AGDEVITCANTFIASVGAIVQAGATPVLVDSENGYVI 113 (374)
T ss_dssp HHHHHHHHHHHTTCS----EEEEESCHHHHHHHHHHHTTCC--TTCEEEEESSSCHHHHHHHHHTTCEEEEECBCTTSSB
T ss_pred HHHHHHHHHHHhCCC----cEEEeCCHHHHHHHHHHHcCCC--CCCEEEECCCccHHHHHHHHHcCCEEEEEecCCCCCc
Confidence 345556677788876 3899999999999888877 43 8999999999999999999999999999999878899
Q ss_pred CHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCccccc
Q 011842 220 DCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKPIG 299 (476)
Q Consensus 220 D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~~D 299 (476)
|+++|++++.+++ .+|+ +++++|.+.|+++|.++|++||+ ++|+|++|+.+........ ....|
T Consensus 114 d~~~l~~~~~~~~---~~v~---~~n~~G~~~~~~~i~~~~~~~~~-----~li~D~~~~~g~~~~~~~~-----~~~~d 177 (374)
T 3uwc_A 114 DPEKIEAAITDKT---KAIM---PVHYTGNIADMPALAKIAKKHNL-----HIVEDACQTILGRINDKFV-----GSWGQ 177 (374)
T ss_dssp CGGGTGGGCCTTE---EEEC---CBCGGGCCCCHHHHHHHHHHTTC-----EEEEECTTCTTCEETTEET-----TSSSS
T ss_pred CHHHHHHhCCCCc---eEEE---EeCCcCCcCCHHHHHHHHHHcCC-----EEEEeCCCccCceeCCeec-----ccccc
Confidence 9999999887643 3454 67789999999999999999999 9999999985433211111 11258
Q ss_pred EEEEcCC--CCCCCCCCceeEEeehh-hhhhhcCCccccCCCCCc--ccCCCCChhHHHHHHHHHHhChhcHHHHHHHHH
Q 011842 300 SVSVSGH--KFVGCPMPCGVQITRME-HINVLSSNVEYLASRDAT--IMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCL 374 (476)
Q Consensus 300 si~~s~h--K~l~~p~~~G~l~~~~~-~~~~l~~~~~yl~~~~~~--~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~ 374 (476)
+++.++| |+++++..+|+++++++ +.+.+.....+-...... ..+.......+ .+++.....+++++..++..
T Consensus 178 ~~~~s~~~~K~l~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~aa~~~~~~~~~~~~~~~~~ 255 (374)
T 3uwc_A 178 FACFSLHPLKNLNVWSDAGVIITHSDEYAEKLRLYRNHGLINRDVCVEYGINCRMDTI--QAVIANRLMNQLETITEKRR 255 (374)
T ss_dssp EEEEECSSSSSSCCSSCCEEEEESCHHHHHHHHHHTBTTEEETTEESSCCCBCBCCHH--HHHHHHHHGGGHHHHHHHHH
T ss_pred EEEEeCCCCCcCCccceeEEEEeCCHHHHHHHHHHHhcCccccCccccccccCCCCHH--HHHHHHHHHHHHHHHHHHHH
Confidence 9999977 99986344778877764 433321111100000000 00111111122 23333333567888899999
Q ss_pred HHHHHHHHHHHhcCC-eEee-cC-Ce--e--EEEEecCCcHHHh-----hceeeccc-----------------------
Q 011842 375 RNAHYLKDRLLDAGI-SAML-NE-LS--S--TVVFERPQDEEFV-----RRWQLACQ----------------------- 419 (476)
Q Consensus 375 ~~a~~l~~~L~~~g~-~~~~-~~-~~--~--iv~f~~~~~~~~~-----~~~~l~~~----------------------- 419 (476)
++++++.+.|++.+. ..+. .+ .. + .+.+..++...+. +++.+...
T Consensus 256 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (374)
T 3uwc_A 256 GIAHLYDQSFVDLSEFIDVPVRREGVYHVFHIYVLRVKYRDQLFQYLKDNGIEVKIHYPIAMHLQPAAKSLGYQQGDFPM 335 (374)
T ss_dssp HHHHHHHHHTGGGTTTEECCCCCTTEECCCSSEEEEETTHHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGCCCTTSCHH
T ss_pred HHHHHHHHHhccCCCeEEeccCCCCCceeeEEEEEEcCCHHHHHHHHHHCCCccccCCCCccccChhhhhcCCccCCCcc
Confidence 999999999998874 3332 12 11 1 1222333333322 12221110
Q ss_pred -----CCEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Q 011842 420 -----GNIAHVVVMPNVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 420 -----~~~lRv~~~~~~T~edid~~~~~l~~~~~~ 449 (476)
...+|+++++.+|++|||+++++|+++.++
T Consensus 336 ~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~~l~~ 370 (374)
T 3uwc_A 336 AEKHGEAVITLPAHPYLTEEEINYIIKKVREFYLE 370 (374)
T ss_dssp HHHHHHHEEEECCCTTSCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHHHh
Confidence 167999999999999999999999988754
No 110
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=99.91 E-value=1e-22 Score=210.40 Aligned_cols=295 Identities=13% Similarity=0.062 Sum_probs=206.4
Q ss_pred hhHHHHHHHHHHHHHHcC--CCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHH-HcCCeEEEEe
Q 011842 136 HSRQFEVGVLDWFARLWE--LENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAAR-MYRMECVKVD 212 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g--~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~-~~G~~v~~v~ 212 (476)
+..++++++.+++.+..| .+.+...+++|+||++||..++.+++. |++.|++++++|.++...++ ..|++++.++
T Consensus 87 g~~~l~~~la~~~~~~~~~~~~~~~~~v~~~~gg~~a~~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~~~~g~~~~~~~ 164 (435)
T 3piu_A 87 GLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLAD--PGEAVLIPTPYYPGFDRDLKWRTGVEIVPIH 164 (435)
T ss_dssp CCHHHHHHHHHHHHHHTTTSSCCCGGGEEEEEHHHHHHHHHHHHHCC--TTCEEEEEESCCTTHHHHTTTTTCCEEEEEE
T ss_pred CcHHHHHHHHHHHHHhhCCCCCCCHHHEEEcCChHHHHHHHHHHhcC--CCCeEEECCCccccHHHHHHHhcCCEEEEee
Confidence 346899999999987766 222334699999999999999988866 89999999999999998888 7899999999
Q ss_pred CCCC--CccCHHHHHHHHHcC---CCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCccccccc
Q 011842 213 CLIS--GEIDCADFKAKLLQN---KDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMP 284 (476)
Q Consensus 213 ~~~~--g~~D~~~Le~~l~~~---~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~ 284 (476)
++++ +.+|+++|+++|++. ..++.+|+++++++++|.+.+ +++|+++|++||+ ++++|++|+++.+.
T Consensus 165 ~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~-----~li~Dea~~~~~~~ 239 (435)
T 3piu_A 165 CTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGI-----HLISDEIYSGTAFS 239 (435)
T ss_dssp CCGGGTSCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTC-----EEEEECTTGGGCCS
T ss_pred CCCccCCcCCHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCC-----EEEEeccccccccC
Confidence 9753 458999999999762 224557888899999999854 6889999999999 99999999876543
Q ss_pred ccccCCCCCCc-----------ccccEEEEcCCCCCC-CCCCceeEEeehh-hhhhhcCCccccCCCCCcccCCCCChhH
Q 011842 285 FVKKAPKVSFK-----------KPIGSVSVSGHKFVG-CPMPCGVQITRME-HINVLSSNVEYLASRDATIMGSRNGHAP 351 (476)
Q Consensus 285 ~~~~~~~~~~~-----------~~~Dsi~~s~hK~l~-~p~~~G~l~~~~~-~~~~l~~~~~yl~~~~~~~~~sr~~~~~ 351 (476)
.....+..... ...+++..+++|+++ .++++|+++++++ +.+.+.....+. ..+ .
T Consensus 240 ~~~~~~~~~~~~~~~~d~~~~~~~~~i~i~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~-------~~~-----~ 307 (435)
T 3piu_A 240 SPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFG-------LVS-----S 307 (435)
T ss_dssp SSCCCCHHHHHHC-------CGGGGEEEEEESSSSSCCGGGCEEEEEESCHHHHHHHHHHGGGS-------CCC-----H
T ss_pred CCCCcCHHHhccccccccccCCCCCEEEEEeeecccCCCceeEEEEEeCCHHHHHHHHHHhhcC-------CCC-----H
Confidence 21111100100 112377889999997 7789999999654 444442222221 111 2
Q ss_pred HHHHHHHHHhC-----hhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecCC--------c-HHH----hh-
Q 011842 352 IFLWYTLNRKG-----YKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERPQ--------D-EEF----VR- 412 (476)
Q Consensus 352 l~~~~~l~~~g-----~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~--------~-~~~----~~- 412 (476)
+.+.++...+. .+.+++..++..+++++|.+.|++.|+....+...+++.+..+. . .++ .+
T Consensus 308 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~l~~~ 387 (435)
T 3piu_A 308 QTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKSGISCLNGNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYE 387 (435)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEECCCCSSSEEEEECGGGSSSSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCeeEEEEEEcccccccCCchhHHHHHHHHHHH
Confidence 22222222221 22346677888889999999999988755444444666666543 1 122 12
Q ss_pred -ceeec-------ccCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 011842 413 -RWQLA-------CQGNIAHVVVMPNVTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 413 -~~~l~-------~~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~ 450 (476)
++.+. ...+++|+++... |+++|+.+++.|.++.+++
T Consensus 388 ~gi~v~~g~~~~~~~~~~iRi~~~~~-~~e~i~~~l~~l~~~l~~~ 432 (435)
T 3piu_A 388 VHLNISPGSSCHCTEPGWFRVCFANL-PERTLDLAMQRLKAFVGEY 432 (435)
T ss_dssp SCEECEEGGGGTCSSTTEEEEECSSS-CHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEeCCcccCCCCCCEEEEEeeCC-CHHHHHHHHHHHHHHHHHH
Confidence 34332 1247899998544 9999999999999988765
No 111
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.91 E-value=6.5e-22 Score=201.78 Aligned_cols=226 Identities=16% Similarity=0.095 Sum_probs=161.6
Q ss_pred HHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHH-HhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccC
Q 011842 142 VGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVG-REVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGEID 220 (476)
Q Consensus 142 ~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa-~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D 220 (476)
.++++.+++++|.+ .+++|+|||+|+..++.++ .. +++.|+++.++|.++..+++..|++++.+++++++.+|
T Consensus 35 ~~l~~~la~~~~~~----~v~~~~ggt~al~~~~~~l~~~--~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d 108 (394)
T 1o69_A 35 NRFEQSVKDYSKSE----NALALNSATAALHLALRVAGVK--QDDIVLASSFTFIASVAPICYLKAKPVFIDCDETYNID 108 (394)
T ss_dssp HHHHHHHHHHHCCS----EEEEESCHHHHHHHHHHHTTCC--TTCEEEEESSSCGGGTHHHHHTTCEEEEECBCTTSSBC
T ss_pred HHHHHHHHHHhCCC----cEEEeCCHHHHHHHHHHHcCCC--CCCEEEECCCccHHHHHHHHHcCCEEEEEEeCCCCCcC
Confidence 34555566677763 3899999999999999887 43 88999999999999999999999999999998788999
Q ss_pred HHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCcccccE
Q 011842 221 CADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKPIGS 300 (476)
Q Consensus 221 ~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~~Ds 300 (476)
+++|+++|++...++.+|++++ ++|...|+++|.++|++||+ ++++|++|+.+..+...... .+ ..+|+
T Consensus 109 ~~~l~~~i~~~~~~~~~v~~~~---~~G~~~~l~~i~~l~~~~~~-----~li~Dea~~~g~~~~~~~~~--~~-~~~~~ 177 (394)
T 1o69_A 109 VDLLKLAIKECEKKPKALILTH---LYGNAAKMDEIVEICKENDI-----VLIEDAAEALGSFYKNKALG--TF-GEFGV 177 (394)
T ss_dssp HHHHHHHHHHCSSCCCEEEEEC---GGGCCCCHHHHHHHHHHTTC-----EEEEECTTCTTCEETTEETT--SS-SSEEE
T ss_pred HHHHHHHHhcccCCceEEEEEC---CCCChhhHHHHHHHHHHcCC-----EEEEECcCcccceeCCcccc--cc-cCcEE
Confidence 9999999987311223666654 78999999999999999999 99999999833322222111 11 13789
Q ss_pred EEEcCCCCCCCCCCceeEEee-hhhhhhhcCCccccCCCC----CcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHHH
Q 011842 301 VSVSGHKFVGCPMPCGVQITR-MEHINVLSSNVEYLASRD----ATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLR 375 (476)
Q Consensus 301 i~~s~hK~l~~p~~~G~l~~~-~~~~~~l~~~~~yl~~~~----~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~ 375 (476)
++++.||+++ |.++|+++++ +++++.+.....+..... ....+.+.+...+....++.. .+.+++.+++..+
T Consensus 178 ~s~s~~K~l~-~~~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~--l~~l~~~~~~~~~ 254 (394)
T 1o69_A 178 YSYNGNKIIT-TSGGGMLIGKNKEKIEKARFYSTQARENCLHYEHLDYGYNYRLSNVLGAIGVAQ--MEVLEQRVLKKRE 254 (394)
T ss_dssp EECCTTSSSC-CSSCEEEEESCHHHHHHHHHHTBTCCCSSSSCCCSSCCCBCBCCHHHHHHHHHH--HTTHHHHHHHHHH
T ss_pred EEEeCCccCC-CCCceEEEECCHHHHHHHHHHHHhccccCccccccccCcccCcCHHHHHHHHHH--HHHHHHHHHHHHH
Confidence 9999999887 7899999996 565554422111111000 011122222233444344333 2457778899999
Q ss_pred HHHHHHHHHHhc
Q 011842 376 NAHYLKDRLLDA 387 (476)
Q Consensus 376 ~a~~l~~~L~~~ 387 (476)
+++++.+.|++.
T Consensus 255 ~~~~l~~~L~~~ 266 (394)
T 1o69_A 255 IYEWYKEFLGEY 266 (394)
T ss_dssp HHHHHHHHHTTT
T ss_pred HHHHHHHHhccc
Confidence 999999999887
No 112
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.91 E-value=6.7e-24 Score=220.39 Aligned_cols=280 Identities=13% Similarity=0.008 Sum_probs=197.3
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeC--CCC
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDC--LIS 216 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~--~~~ 216 (476)
....++++++++ +|.+ ...++|+|+|+||..++.++.. |++.|++++++|.|+..++.+.|++++.++. +++
T Consensus 57 ~~~~~~~~~la~-~g~~---~~v~~~~G~t~a~~~~~~a~~~--~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~~ 130 (446)
T 2x3l_A 57 EVILKSMKQVEK-HSDY---DGYFLVNGTTSGILSVIQSFSQ--KKGDILMARNVHKSVLHALDISQQEGHFIETHQSPL 130 (446)
T ss_dssp SHHHHHHHHHCS-CTTE---EEEEESSHHHHHHHHHHHTTTT--SSSCEEECTTCCHHHHHHHHHHTCCEEECEEEECTT
T ss_pred hHHHHHHHHHHh-cCCC---ceEEEeCCHHHHHHHHHHHhcC--CCCEEEEecCccHHHHHHHHHcCCeEEEEeCeeccc
Confidence 455678888999 9886 2478999999999999988765 8999999999999999999999999999988 654
Q ss_pred ----CccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCC
Q 011842 217 ----GEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKV 292 (476)
Q Consensus 217 ----g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~ 292 (476)
+.+|+++| +.+++ .+|++++ +|++|.+.|+++|+++|++||+ |+|+|+||++ .+.+... .+
T Consensus 131 ~~~~~~~d~~~l---~~~~~---~~v~~~~-~n~~G~~~~l~~I~~l~~~~~~-----~livDea~~~-~~~f~~~--~~ 195 (446)
T 2x3l_A 131 TNHYNKVNLSRL---NNDGH---KLVVLTY-PNYYGETFNVEEVIKSLHQLNI-----PVLIDEAHGA-HFGLQGF--PD 195 (446)
T ss_dssp TSSEEEEEC----------C---CEEEEES-SCTTSCCCCHHHHHHHHHHTTC-----CEEEECTTCT-TTTSTTS--CC
T ss_pred cCcCCCCCHHHH---cCCCc---eEEEEEC-CCCCeEecCHHHHHHHHHhcCC-----eEEEcchhhh-hhccCCC--CC
Confidence 67899888 33333 3777777 6669999999999999999999 9999999987 3322221 13
Q ss_pred CCcc-cccEEEEcCCCCCCCCCCceeEEeehhhhh--hhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHH
Q 011842 293 SFKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHIN--VLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKE 369 (476)
Q Consensus 293 ~~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~--~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~ 369 (476)
+... .+|+++.|+||++++|.++|+++++++.++ .+.....+. ..++.+.....++.++++.+...+.++.
T Consensus 196 ~~~~~g~Di~~~S~~K~l~~~~g~g~l~~~~~~i~~~~~~~~~~~~------~~~s~~~~~~aal~~a~~~l~~~g~~~~ 269 (446)
T 2x3l_A 196 STLNYQADYVVQSFHKTLPALTMGSVLYIHKNAPYRENIIEYLSYF------QTSSPSYLIMASLESAAQFYKTYDSTLF 269 (446)
T ss_dssp CGGGGTCSEEEECHHHHSSSCTTCEEEEEETTCTTHHHHHHHHHHH------SCSSCCHHHHHHHHHHHHHHHHCCCHHH
T ss_pred ChHHcCCCEEEECCccccccccccEEEEEcCCcCCHHHHHHHHHHH------cCCCchHHHHHHHHHHHHHHHHhCHHHH
Confidence 3322 379999999999988899999999887543 211100111 1223332223344555555544455557
Q ss_pred HHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecCC--cHHHh-----hceeec-ccCCEEEEEEcCCCCHHHHHHHHH
Q 011842 370 VQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERPQ--DEEFV-----RRWQLA-CQGNIAHVVVMPNVTIDKLDDFLN 441 (476)
Q Consensus 370 ~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~--~~~~~-----~~~~l~-~~~~~lRv~~~~~~T~edid~~~~ 441 (476)
.++..++++++++. ++..+.+.....+.+..++ ..++. +++.+. ...+.+|++++..+|++++ ++++
T Consensus 270 ~~~~~~l~~~l~~~----g~~~~~~~~~~~l~i~~~~~~~~~l~~~L~~~GI~v~~~g~~~iRi~~~~~~t~e~i-~l~~ 344 (446)
T 2x3l_A 270 FAKRAQLIECLENK----GFEMLQVDDPLKLLIKYEGFTGHDIQNWFMNAHIYLELADDYQALAILPLWHHDDTY-LFDS 344 (446)
T ss_dssp HHHHHHHHHHHHHH----TCEEEECSSTTEEEEECTTSCHHHHHHHHHHTTEEESEECSSCEEEECCCCCTTCCC-CHHH
T ss_pred HHHHHHHHHHHHHc----CCEECcCCCCeEEEEEeCCcCHHHHHHHHHHCCCEEEecCCCEEEEEeecCCCHHHH-HHHH
Confidence 78888888888776 6655443323345666542 22222 344444 4457899999999999999 9999
Q ss_pred HHHHHHHHH
Q 011842 442 ELIENRSTW 450 (476)
Q Consensus 442 ~l~~~~~~~ 450 (476)
+|+++.+.+
T Consensus 345 aL~~~~~~~ 353 (446)
T 2x3l_A 345 LLRKIEDMI 353 (446)
T ss_dssp HHHHHHTCC
T ss_pred HHHHHHHhh
Confidence 999987654
No 113
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=99.91 E-value=1.2e-22 Score=205.22 Aligned_cols=285 Identities=14% Similarity=0.078 Sum_probs=197.1
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCC
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLI 215 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~ 215 (476)
+..++++++.+++. +.++ ..+++|+|||+|+..++.++.. |++.|+++.++|.++...++..|++++.+|++.
T Consensus 64 g~~~l~~~la~~~~---~~~~--~~v~~~~g~~~a~~~~~~~l~~--~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~ 136 (375)
T 3op7_A 64 GSPAFKKSVSQLYT---GVKP--EQILQTNGATGANLLVLYSLIE--PGDHVISLYPTYQQLYDIPKSLGAEVDLWQIEE 136 (375)
T ss_dssp CCHHHHHHHHTTSS---SCCG--GGEEEESHHHHHHHHHHHHHCC--TTCEEEEEESSCTHHHHHHHHTTCEEEEEEEEG
T ss_pred ChHHHHHHHHHHhc---cCCh--hhEEEcCChHHHHHHHHHHhcC--CCCEEEEeCCCchhHHHHHHHcCCEEEEEeccc
Confidence 34567766555431 3443 3599999999999999988865 899999999999999999999999999999873
Q ss_pred --CCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCcccccccccccCC
Q 011842 216 --SGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAP 290 (476)
Q Consensus 216 --~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~ 290 (476)
++.+|+++|++++.++++ +|+++++.+++|.+.| +++|+++|++||+ ++++|++|+.+... ....
T Consensus 137 ~~~~~~d~~~l~~~l~~~~~---~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~-----~li~De~~~~~~~~--~~~~ 206 (375)
T 3op7_A 137 ENGWLPDLEKLRQLIRPTTK---MICINNANNPTGAVMDRTYLEELVEIASEVGA-----YILSDEVYRSFSEL--DVPS 206 (375)
T ss_dssp GGTTEECHHHHHHHCCTTCC---EEEEESSCTTTCCCCCHHHHHHHHHHHHTTTC-----EEEEECCSCCCSSS--CCCC
T ss_pred cCCCCCCHHHHHHhhccCCe---EEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCC-----EEEEEccccccccc--CCCc
Confidence 456899999999976554 7788889999999999 9999999999999 99999999875442 1000
Q ss_pred CCCCcccccEEEEcCCCCCC-CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhC--hhcHH
Q 011842 291 KVSFKKPIGSVSVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKG--YKGFQ 367 (476)
Q Consensus 291 ~~~~~~~~Dsi~~s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g--~~g~~ 367 (476)
..+. ...+.+..+++|+++ .++++|++++++++.+.+.....+. ..+.+ .+.++++...+. ...++
T Consensus 207 ~~~~-~~~~i~~~s~sK~~~~~G~r~G~v~~~~~l~~~~~~~~~~~-------~~~~~---~~~~~~~~~~l~~~~~~~~ 275 (375)
T 3op7_A 207 IIEV-YDKGIAVNSLSKTYSLPGIRIGWVAANHQVTDILRDYRDYT-------MICAG---VFDDLVAQLALAHYQEILE 275 (375)
T ss_dssp HHHH-CTTEEEEEESSSSSSCGGGCCEEEECCHHHHHHHTTTGGGT-------TSCCC---HHHHHHHHHHHHTHHHHHH
T ss_pred hhhh-cCCEEEEeEChhhcCCcccceEEEEeCHHHHHHHHHHHhhh-------ccCCC---cHHHHHHHHHHhccHHHHH
Confidence 0111 124577888999997 6788999999887777664333221 11111 233333333321 23355
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCeEeecC-CeeEEEEecC--C-cHHHh------hceeec-c----cCCEEEEEEcCCCC
Q 011842 368 KEVQKCLRNAHYLKDRLLDAGISAMLNE-LSSTVVFERP--Q-DEEFV------RRWQLA-C----QGNIAHVVVMPNVT 432 (476)
Q Consensus 368 ~~~~~~~~~a~~l~~~L~~~g~~~~~~~-~~~iv~f~~~--~-~~~~~------~~~~l~-~----~~~~lRv~~~~~~T 432 (476)
+..++..++++++.+.|++.+...+..+ ....+++..+ . ..++. ++..+. . ..+.+|+++. .+
T Consensus 276 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~--~~ 353 (375)
T 3op7_A 276 RNRHILEENLAILDQWIEEEPLVSYIRPAVVSTSFVKIAVDMPMEDFCLQLLQEHGVLLVPGNRFERDGYVRLGFA--CE 353 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTEEECCCSSSSCEEEEECCSSCHHHHHHHHHHHHCEECEEGGGGTCTTEEEECCC--SC
T ss_pred HHHHHHHHHHHHHHHHHhhCCCceEecCCCeEEEeEEcCCCCCHHHHHHHHHHhCCEEEeChhhhCCCCeEEEEec--CC
Confidence 6667778899999999998754444433 3333333332 2 22222 233332 1 1478898765 45
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 011842 433 IDKLDDFLNELIENRSTW 450 (476)
Q Consensus 433 ~edid~~~~~l~~~~~~~ 450 (476)
.++|+.+++.|.++.+++
T Consensus 354 ~~~i~~~l~~l~~~l~~~ 371 (375)
T 3op7_A 354 QETLIKGLEKLSQFLRRF 371 (375)
T ss_dssp HHHHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 699999999999887654
No 114
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=99.91 E-value=2.7e-22 Score=201.80 Aligned_cols=271 Identities=14% Similarity=0.132 Sum_probs=195.6
Q ss_pred HHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCC-cEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccCHH
Q 011842 144 VLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPD-GILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCA 222 (476)
Q Consensus 144 ~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~-~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~~ 222 (476)
+++.+++++|.+++ .+++|+|+++++..++.+... || +.|+++.++|.++...++..|++++.+|.++++.+|++
T Consensus 63 lr~~la~~~~~~~~--~v~~~~G~~~ai~~~~~~~~~--~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~ 138 (356)
T 1fg7_A 63 VIENYAQYAGVKPE--QVLVSRGADEGIELLIRAFCE--PGKDAILYCPPTYGMYSVSAETIGVECRTVPTLDNWQLDLQ 138 (356)
T ss_dssp HHHHHHHHHTSCGG--GEEEESHHHHHHHHHHHHHCC--TTTCEEEECSSSCTHHHHHHHHHTCEEEECCCCTTSCCCHH
T ss_pred HHHHHHHHhCCChH--HEEEcCCHHHHHHHHHHHHhC--CCCCEEEEeCCChHHHHHHHHHcCCEEEEeeCCCCCCCCHH
Confidence 34445566687643 599999999999999888765 88 99999999999999999999999999999877789999
Q ss_pred HHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHH--hCCCCCceEEEEecCcccccccccccCCCCCC-cc-cc
Q 011842 223 DFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEE--SGFTQDRFYIHCDGALFGLMMPFVKKAPKVSF-KK-PI 298 (476)
Q Consensus 223 ~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~--~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~-~~-~~ 298 (476)
+|+++++ + +.+|++++++|+||.+.|.++|.++++. +|+ ++++|++|+.+. +.. +.... .. ..
T Consensus 139 ~l~~~i~-~---~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~-----~li~De~~~~~~-~~~---~~~~~~~~~~~ 205 (356)
T 1fg7_A 139 GISDKLD-G---VKVVYVCSPNNPTGQLINPQDFRTLLELTRGKA-----IVVADEAYIEFC-PQA---SLAGWLAEYPH 205 (356)
T ss_dssp HHHTSCT-T---EEEEEEESSCTTTCCCCCHHHHHHHHHHHTTTC-----EEEEECTTGGGS-GGG---CSGGGTTTCTT
T ss_pred HHHHHhc-C---CCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCC-----EEEEEccchhhc-CCC---cHHHHHhhCCC
Confidence 9998885 3 3478888999999999876555544443 899 999999998654 111 11111 11 25
Q ss_pred cEEEEcCCCCCC-CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhc---HHHHHHHHH
Q 011842 299 GSVSVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKG---FQKEVQKCL 374 (476)
Q Consensus 299 Dsi~~s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g---~~~~~~~~~ 374 (476)
+++..+++|+++ .++++|++++++++++.+...... + + ...+.++++...+...+ +++..++..
T Consensus 206 ~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~~-------~--~---~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 273 (356)
T 1fg7_A 206 LAILRTLSKAFALAGLRCGFTLANEEVINLLMKVIAP-------Y--P---LSTPVADIAAQALSPQGIVAMRERVAQII 273 (356)
T ss_dssp EEEEEESSSTTCCGGGCCEEEEECHHHHHHHHHHSCS-------S--C---SCHHHHHHHHHHTSHHHHHHHHHHHHHHH
T ss_pred EEEEecchHhhcCchhhhEEEEeCHHHHHHHHHhcCC-------C--C---CCHHHHHHHHHHhcCccHHHHHHHHHHHH
Confidence 678889999986 678899999988876655321111 1 1 22456666666665544 677788888
Q ss_pred HHHHHHHHHHHhcCC-eEeecCCeeEEEEecCCcHHHhh-----ceeecc-c-----CCEEEEEEcCCCCHHHHHHHHHH
Q 011842 375 RNAHYLKDRLLDAGI-SAMLNELSSTVVFERPQDEEFVR-----RWQLAC-Q-----GNIAHVVVMPNVTIDKLDDFLNE 442 (476)
Q Consensus 375 ~~a~~l~~~L~~~g~-~~~~~~~~~iv~f~~~~~~~~~~-----~~~l~~-~-----~~~lRv~~~~~~T~edid~~~~~ 442 (476)
++++++.+.|++.|. ....++.++++.+..++..++.+ ++.+.. . .+.+|+++. +++|+++++++
T Consensus 274 ~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~g~~~~~~~~iRis~~---~~~e~~~~~~~ 350 (356)
T 1fg7_A 274 AEREYLIAALKEIPCVEQVFDSETNYILARFKASSAVFKSLWDQGIILRDQNKQPSLSGCLRITVG---TREESQRVIDA 350 (356)
T ss_dssp HHHHHHHHHHHHSTTEEEECCCSSSEEEEEETTHHHHHHHHHHTTEECEECTTSTTCTTEEEEECC---CHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCceEECCCCCeEEEEECCCHHHHHHHHHHCCEEEEECCCCCCCCCeEEEEeC---CHHHHHHHHHH
Confidence 999999999999873 23345556777777664333322 333322 2 258999885 68999999999
Q ss_pred HHHH
Q 011842 443 LIEN 446 (476)
Q Consensus 443 l~~~ 446 (476)
|+++
T Consensus 351 l~~~ 354 (356)
T 1fg7_A 351 LRAE 354 (356)
T ss_dssp HHTC
T ss_pred HHhh
Confidence 8753
No 115
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.90 E-value=3.9e-23 Score=207.36 Aligned_cols=288 Identities=14% Similarity=0.101 Sum_probs=201.7
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCc-hhHHHHHHHHHHhh-CCCcEEEecCCCchHHHHHHHHcCCeEEEEeC
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCG-TEGNLHGILVGREV-FPDGILYASRESHYSVFKAARMYRMECVKVDC 213 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~gg-t~An~~al~aa~~~-~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~ 213 (476)
+..++.+++++++++++|.+ ++..+++|+|+ |+|+..++.+.... .++++|+++..+|+++. .++.+| +++.+|+
T Consensus 45 ~~~~~~~~l~~~la~~~g~~-~~~~v~~~~g~gt~al~~~~~~l~~~~~~g~~vi~~~~~~~~~~-~~~~~g-~~~~v~~ 121 (360)
T 1w23_A 45 SYEEVHEQAQNLLRELLQIP-NDYQILFLQGGASLQFTMLPMNLLTKGTIGNYVLTGSWSEKALK-EAKLLG-ETHIAAS 121 (360)
T ss_dssp HHHHHHHHHHHHHHHHHTCC-TTEEEEEESSHHHHHHHHHHHHHCCTTCEEEEEECSHHHHHHHH-HHHTTS-EEEEEEE
T ss_pred HHHHHHHHHHHHHHHHhCCC-CCceEEEECCcchHHHHHHHHHhcCCCCcccEEEecchhHHHHH-HHHHhC-CeEEeec
Confidence 45678889999999999996 23468999998 99999888776542 24678889888888754 457789 9999999
Q ss_pred CC-CCccCHHHHHH-HHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCC
Q 011842 214 LI-SGEIDCADFKA-KLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPK 291 (476)
Q Consensus 214 ~~-~g~~D~~~Le~-~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~ 291 (476)
++ +|.+|+++|++ ++.++ +.+|++++++|++|.+.| +| +++||+ ++++|++|+.+..+
T Consensus 122 ~~~~~~~d~~~l~~~~i~~~---~k~v~~~~~~nptG~~~~--~i---~~~~~~-----~li~D~a~~~~~~~------- 181 (360)
T 1w23_A 122 TKANSYQSIPDFSEFQLNEN---DAYLHITSNNTIYGTQYQ--NF---PEINHA-----PLIADMSSDILSRP------- 181 (360)
T ss_dssp CGGGTSCSCCCGGGCCCCTT---EEEEEEESEETTTTEECS--SC---CCCCSS-----CEEEECTTTTTSSC-------
T ss_pred ccccCcCCccchHhhccCCC---CCEEEEeCCCCCcceecc--cc---cccCCc-----eEEEechhhcCCCC-------
Confidence 75 67789999988 77443 458888899999999865 33 338999 99999999865443
Q ss_pred CCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCc-cccCCC----CCcccCCCCChhHHHHHHHHHHhChh-c
Q 011842 292 VSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNV-EYLASR----DATIMGSRNGHAPIFLWYTLNRKGYK-G 365 (476)
Q Consensus 292 ~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~-~yl~~~----~~~~~~sr~~~~~l~~~~~l~~~g~~-g 365 (476)
++... .|+++.++||+++ |.|+|++++++++++.+.... .|+... .....++.+......+..+++.+... +
T Consensus 182 ~~~~~-~di~~~s~sK~~~-~~G~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~ 259 (360)
T 1w23_A 182 LKVNQ-FGMIYAGAQKNLG-PSGVTVVIVKKDLLNTKVEQVPTMLQYATHIKSDSLYNTPPTFSIYMLRNVLDWIKDLGG 259 (360)
T ss_dssp CCGGG-CSEEEEETTTTTS-CTTCEEEEEEHHHHCSCCTTCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTH
T ss_pred cCccc-CCEEEEEcccccC-CCCcEEEEEcHHHHhhcccCCcchhhhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHhcC
Confidence 22222 3899999999997 678999999988765553221 121100 00112333323334455566655444 6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcC-CeEee--cC-Cee-EEEEecCCc---HHHhh-----ceeecc---cCCEEEEEEcC
Q 011842 366 FQKEVQKCLRNAHYLKDRLLDAG-ISAML--NE-LSS-TVVFERPQD---EEFVR-----RWQLAC---QGNIAHVVVMP 429 (476)
Q Consensus 366 ~~~~~~~~~~~a~~l~~~L~~~g-~~~~~--~~-~~~-iv~f~~~~~---~~~~~-----~~~l~~---~~~~lRv~~~~ 429 (476)
++++.++..++++++.+.|++.+ +.... ++ .++ ++.|..++. .++.+ ++.+.. ..+.+|++++.
T Consensus 260 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~iRis~~~ 339 (360)
T 1w23_A 260 AEAIAKQNEEKAKIIYDTIDESNGFYVGHAEKGSRSLMNVTFNLRNEELNQQFLAKAKEQGFVGLNGHRSVGGCRASIYN 339 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTTSSEESSCGGGBCSSEEEEECSSHHHHHHHHHHHHHTTEESCBCCTTTCSEEEECCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCcccccCCchhccCcEEEEEcCCCccHHHHHHHHHHCCeeeecCCCCCCeEEEEecC
Confidence 78899999999999999999887 42322 22 234 777777642 22322 222221 13689999999
Q ss_pred CCCHHHHHHHHHHHHHHHH
Q 011842 430 NVTIDKLDDFLNELIENRS 448 (476)
Q Consensus 430 ~~T~edid~~~~~l~~~~~ 448 (476)
.+|++++++++++|+++.+
T Consensus 340 ~~~~~~i~~~~~~l~~~~~ 358 (360)
T 1w23_A 340 AVPIDACIALRELMIQFKE 358 (360)
T ss_dssp TSCHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHh
Confidence 9999999999999988764
No 116
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=99.90 E-value=1e-22 Score=209.91 Aligned_cols=299 Identities=10% Similarity=-0.003 Sum_probs=209.0
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCccc---EEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHH-cCCeEEEE
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYW---GYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARM-YRMECVKV 211 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~---g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~-~G~~v~~v 211 (476)
+..++++++.+++.+.. ...+... +++|+|+++|+..++.++.+ |++.|+++.++|.++...++. .|++++.+
T Consensus 89 g~~~lr~~ia~~~~~~~-~~~~~~~~~~i~~t~g~~~al~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~~ 165 (430)
T 2x5f_A 89 GIEELRDLWQQKMLRDN-PELSIDNMSRPIVTNALTHGLSLVGDLFVN--QDDTILLPEHNWGNYKLVFNTRNGANLQTY 165 (430)
T ss_dssp CCHHHHHHHHHHHHHHC-TTCCGGGBCCCEEESHHHHHHHHHHHHHCC--TTCEEEEESSCCTHHHHHHTTTTCCEEEEE
T ss_pred CCHHHHHHHHHHHhccC-cccCCCccceEEEcCCchHHHHHHHHHHhC--CCCEEEEcCCcCccHHHHHHHhcCCeEEEE
Confidence 35688889888887763 4333346 89999999999999988765 899999999999999999999 99999999
Q ss_pred eCCC-CCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHH-----hCCCCCceEEEEecCccccc
Q 011842 212 DCLI-SGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEE-----SGFTQDRFYIHCDGALFGLM 282 (476)
Q Consensus 212 ~~~~-~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~-----~g~~~~~~~lhvD~a~~g~~ 282 (476)
|+++ ++.+|+++|++++.+...++.++++++++|+||.+.| +++|+++|++ ||+ ++++|++|+.+.
T Consensus 166 ~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~~~~-----~li~De~~~~~~ 240 (430)
T 2x5f_A 166 PIFDKDGHYTTDSLVEALQSYNKDKVIMILNYPNNPTGYTPTHKEVTTIVEAIKALANKGTKV-----IAVVDDAYYGLF 240 (430)
T ss_dssp CCBCTTSCBCSHHHHHHHHHCCSSEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTTCEE-----EEEEECTTTTCB
T ss_pred eccCccCCcCHHHHHHHHHhcCCCCEEEEEcCCCCCCCCcCCHHHHHHHHHHHHhhhhccCCE-----EEEEehhccccc
Confidence 9875 4689999999999874334457888899999999988 8999999999 999 999999998765
Q ss_pred ccccccCCCC-CCc--ccc---cEEEEcCCCCCC-CCCCceeEEe---ehhhhhhhcCCccccCCCCCcccCCCCChhHH
Q 011842 283 MPFVKKAPKV-SFK--KPI---GSVSVSGHKFVG-CPMPCGVQIT---RMEHINVLSSNVEYLASRDATIMGSRNGHAPI 352 (476)
Q Consensus 283 ~~~~~~~~~~-~~~--~~~---Dsi~~s~hK~l~-~p~~~G~l~~---~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l 352 (476)
+......+.. .+. ... +++..++||+++ .++++|++++ ++++++.+......... ....+. ..+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~l~~~~~~~~~---~~~~~~---~~~ 314 (430)
T 2x5f_A 241 YEDVYTQSLFTALTNLHSNAILPIRLDGATKEFFAWGFRVGFMTFGTSDQTTKEVLEAKVKGLIR---SNISSG---PLP 314 (430)
T ss_dssp CSSSCCSCHHHHHHTTCCTTEEEEEEEEHHHHTTCGGGCCEEEEEBCCCHHHHHHHHHHHHHHHH---TTTSSC---CHH
T ss_pred CCcccchHHHHHHhhccCCcceEEEEEecccCCCCCCCCeEEEEEecCCHHHHHHHHHHHhhhhh---cccCCC---ChH
Confidence 4321111111 111 123 567889999996 6678999999 77766555321111000 001111 234
Q ss_pred HHHHHHHHhC-h----hcHHHHHHHHHHHHHHHHHHHH----hcCCeEeecCCe-eEEEEecC--CcHHH----h--hce
Q 011842 353 FLWYTLNRKG-Y----KGFQKEVQKCLRNAHYLKDRLL----DAGISAMLNELS-STVVFERP--QDEEF----V--RRW 414 (476)
Q Consensus 353 ~~~~~l~~~g-~----~g~~~~~~~~~~~a~~l~~~L~----~~g~~~~~~~~~-~iv~f~~~--~~~~~----~--~~~ 414 (476)
.++++...+. . +.+++..++..++++++.+.|+ +.|+. +.++.. ..+.+..+ +..++ . +++
T Consensus 315 ~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~-~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~gi 393 (430)
T 2x5f_A 315 TQSAVKHVLKNNKQFDKEIEQNIQTLKERYEVTKEVVYADQYHSHWQ-AYDFNSGYFMAIKVHDVDPEALRKHLIDKYSI 393 (430)
T ss_dssp HHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHTCGGGTTTEE-ECCCCBSSEEEEEESSSCHHHHHHHHHHHHCE
T ss_pred HHHHHHHHHccChHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCce-eeCCCceEEEEeCCCCCCHHHHHHHHHHhCCE
Confidence 4444444442 1 2234477778889999999998 55543 334444 34555554 22222 2 344
Q ss_pred eecc-cCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 011842 415 QLAC-QGNIAHVVVMPNVTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 415 ~l~~-~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~ 450 (476)
.+.. ..+.+|++++. +++++|+++++.|+++.+++
T Consensus 394 ~v~~g~~~~iRis~~~-~~~e~i~~~~~~l~~~l~~~ 429 (430)
T 2x5f_A 394 GVIALNATDIRIAFSC-VEKDDIPHVFDSIAKAIDDL 429 (430)
T ss_dssp ECEECSSSEEEEEGGG-SCGGGHHHHHHHHHHHHHHH
T ss_pred EEecCCCCeEEEEEec-CCHHHHHHHHHHHHHHHHhc
Confidence 4433 35789999885 59999999999999987654
No 117
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.90 E-value=7.3e-23 Score=223.16 Aligned_cols=298 Identities=14% Similarity=0.122 Sum_probs=205.1
Q ss_pred HHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHH-HHHcCCeEEEEeCCCC--
Q 011842 140 FEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKA-ARMYRMECVKVDCLIS-- 216 (476)
Q Consensus 140 le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~-~~~~G~~v~~v~~~~~-- 216 (476)
...++.+.+++++|.+. ..++++|+|+||..++.+... ||+.|+++++.|.|+..+ +++.|++++.++.+.+
T Consensus 174 ~i~e~e~~lA~~~gae~---~i~v~nGtt~an~~ai~al~~--pGD~VLv~~~~H~S~~~~~~~l~Ga~~v~v~~~~~~~ 248 (730)
T 1c4k_A 174 PAVAAEKHAARVYNADK---TYFVLGGSSNANNTVTSALVS--NGDLVLFDRNNHKSVYNSALAMAGGRPVYLQTNRNPY 248 (730)
T ss_dssp HHHHHHHHHHHHTTCSE---EEEESSHHHHHHHHHHHHHCC--TTCEEEEETTCCHHHHHHHTTTTCCEEEEECEEECTT
T ss_pred HHHHHHHHHHHHHCCCc---EEEECCHHHHHHHHHHHHhcC--CCCEEEEcCCchHHHHHHHHHHCCCEEEEEeCCcccc
Confidence 45577788999999874 267777888999999988766 999999999999999998 8889999998876432
Q ss_pred ---CccCHHHH-----HHHHHcC------CCCc-EEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccc
Q 011842 217 ---GEIDCADF-----KAKLLQN------KDKP-AIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGL 281 (476)
Q Consensus 217 ---g~~D~~~L-----e~~l~~~------~~~p-~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~ 281 (476)
|.+|+++| +++|.++ +.+| .+|+++++ |++|.+.|+++|+++|++||+ ++|+|+||+++
T Consensus 249 ~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~dl~~I~~la~~~g~-----~livDeAh~~~ 322 (730)
T 1c4k_A 249 GFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIYNAHEVVKRIGHLCD-----YIEFDSAWVGY 322 (730)
T ss_dssp CCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEECHHHHHHHHGGGBS-----EEEEECTTCCG
T ss_pred CccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeecCHHHHHHHHHHcCC-----eEEEEcccccc
Confidence 45788888 8888765 4233 47778877 589999999999999999999 99999999754
Q ss_pred cc--cccccCCCCCCcc-ccc----EEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCC----CC-Ccc-cCCCCC
Q 011842 282 MM--PFVKKAPKVSFKK-PIG----SVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLAS----RD-ATI-MGSRNG 348 (476)
Q Consensus 282 ~~--~~~~~~~~~~~~~-~~D----si~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~----~~-~~~-~~sr~~ 348 (476)
.. +...+...++... ++| +++.|+||++++|.++|+++++++.+.. ...++.. .. ..+ .++.+.
T Consensus 323 ~~f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L~g~~~gg~I~v~~~~l~g---~~~~i~~~~~~~~~~~~~stsp~~ 399 (730)
T 1c4k_A 323 EQFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQAGFSQTSQIHKKDSHIKG---QLRYCDHKHFNNSFNLFMSTSPFY 399 (730)
T ss_dssp GGSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHSSCCTTCEEEEEECGGGTT---STTCCCHHHHHHHHHHHSCSSCCH
T ss_pred cccCcccCCcCcccccccCCCCCCEEEEECCCCCCCCCCCEEEEEecchhhcC---cccccCHHHHHHHHHHhCCCCCcH
Confidence 32 2111111232211 366 9999999999988888999888875411 0011100 00 001 223332
Q ss_pred hhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHh--cCCeEeecCC------------------------------
Q 011842 349 HAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLD--AGISAMLNEL------------------------------ 396 (476)
Q Consensus 349 ~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~--~g~~~~~~~~------------------------------ 396 (476)
....++.++++.+..++.++.+++..++++++++.|++ .|+..+.++.
T Consensus 400 ~~iaal~aA~~~l~~~~g~~~~~~~~~~a~~lr~~L~~~i~g~~v~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 (730)
T 1c4k_A 400 PMYAALDVNAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFRPFVPPVVNGKKWEDGDTEDMANNIDYWRFEKGAKWH 479 (730)
T ss_dssp HHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEESSCSEETTEEGGGSCHHHHTTCGGGGBCCTTCTTT
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhCCCeEEccccccccccccccccccccccchhhccCccchhc
Confidence 22233445555554434477789999999999999998 4554432210
Q ss_pred ------e---eE----EEEecCC--------------cHHHh-----hceeec-ccCCEEEEEEcCCCCHHHHHHHHHHH
Q 011842 397 ------S---ST----VVFERPQ--------------DEEFV-----RRWQLA-CQGNIAHVVVMPNVTIDKLDDFLNEL 443 (476)
Q Consensus 397 ------~---~i----v~f~~~~--------------~~~~~-----~~~~l~-~~~~~lRv~~~~~~T~edid~~~~~l 443 (476)
. .+ +.|..|+ ..++. +++.+. .....+|+++++.+|++++++|+++|
T Consensus 480 g~~~~~~~~~~idp~kv~i~~pg~~~~~g~~~~~g~~~~~l~~~L~e~GI~v~~~~~~~ir~~~s~g~t~e~i~~Ll~aL 559 (730)
T 1c4k_A 480 AYEGYGDNQYYVDPNKFMLTTPGINPETGDYEDFGVPATIVANYLRDHGIIPEKSDLNSILFLMTPAETPAKMNNLITQL 559 (730)
T ss_dssp CCTTCCTTCEEECTTEEEEECSSEETTTTEECSSCCCHHHHHHHHHHTTCCCSEECSSEEEEECCTTCCHHHHHHHHHHH
T ss_pred cccccCCcccccCCeEEEEEeCCcccccccccccCCCHHHHHHHHHHCCcEEEECCCCeEEEEeCCCCCHHHHHHHHHHH
Confidence 0 11 4565531 11111 123232 34578999999999999999999999
Q ss_pred HHHHHHHH
Q 011842 444 IENRSTWY 451 (476)
Q Consensus 444 ~~~~~~~~ 451 (476)
+++.+.+.
T Consensus 560 ~~i~~~~~ 567 (730)
T 1c4k_A 560 LQLQRLIE 567 (730)
T ss_dssp HHHHHHHH
T ss_pred HHHHHhcc
Confidence 99987664
No 118
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.90 E-value=1.1e-22 Score=223.33 Aligned_cols=295 Identities=13% Similarity=0.028 Sum_probs=206.7
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCC--
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLIS-- 216 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~-- 216 (476)
....+..+.+++++|.+. ..++++|+|+||..++.+... ||+.|+++++.|.|+..+++..|++++.++.+.+
T Consensus 205 g~v~~~ee~la~l~G~d~---~i~~~~Gtt~a~~~~i~al~~--~GD~Vlv~~~~h~s~~~~~~~~G~~~v~v~~~~~~~ 279 (755)
T 2vyc_A 205 GAFGESEKYAARVFGADR---SWSVVVGTSGSNRTIMQACMT--DNDVVVVDRNCHKSIEQGLMLTGAKPVYMVPSRNRY 279 (755)
T ss_dssp HHHHHHHHHHHHHHTCSE---EEEESSHHHHHHHHHHHHHCC--TTCEEEEESSCCHHHHHHHHHHCCEEEEECCCBCTT
T ss_pred cHHHHHHHHHHHHhCCCc---eEEECCcHHHHHHHHHHHhcC--CCCEEEECCCchHHHHHHHHHcCCEEEEEeCCCCcc
Confidence 344567788999999863 367788888999999988876 9999999999999999999999999999987643
Q ss_pred ---Ccc-----CHHHHHHHHHcC--C-----CCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccc
Q 011842 217 ---GEI-----DCADFKAKLLQN--K-----DKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGL 281 (476)
Q Consensus 217 ---g~~-----D~~~Le~~l~~~--~-----~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~ 281 (476)
|.+ |+++|+++|.++ + .+|.+++++++ |++|.+.|+++|+++|++||+ ++|+|+||+++
T Consensus 280 g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~dl~~I~~ia~~~~~-----~livDeA~~~~ 353 (755)
T 2vyc_A 280 GIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYNAKEAQDLLEKTSD-----RLHFDEAWYGY 353 (755)
T ss_dssp SCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEECHHHHHHHHTTTCS-----EEEEECTTCTT
T ss_pred ccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceecCHHHHHHHHHHcCC-----EEEEECcCchh
Confidence 346 999999999763 2 23457777776 689999999999999999999 99999999864
Q ss_pred cccccc--cCCCCCCcccccE------EEEcCCCCCCCCCCceeEEeehh--hh--hhhcCCccccCCCCCcccCCCCCh
Q 011842 282 MMPFVK--KAPKVSFKKPIGS------VSVSGHKFVGCPMPCGVQITRME--HI--NVLSSNVEYLASRDATIMGSRNGH 349 (476)
Q Consensus 282 ~~~~~~--~~~~~~~~~~~Ds------i~~s~hK~l~~p~~~G~l~~~~~--~~--~~l~~~~~yl~~~~~~~~~sr~~~ 349 (476)
...... ....+.+ +.+|+ ++.|+||++++|.++|+++++++ .+ ..+......+ ..+|.+..
T Consensus 354 ~~~~~~~~~~~~~~g-~~aD~~~~~~iv~~S~hK~L~g~~~g~~i~~~~~~~~i~~~~~~~~~~~~------~s~sp~~~ 426 (755)
T 2vyc_A 354 ARFNPIYADHYAMRG-EPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAINFSRFNQAYMMH------ATTSPLYA 426 (755)
T ss_dssp GGGCGGGTTSSSSCS-CCCCCSSBEEEEEEETTTSSSCCTTCEEEEEECCBTCCCHHHHHHHHHHT------SCSSCCHH
T ss_pred cccCcccCCcchhcC-CcCCccCCCeEEEECccccccCcCCeeeeeecCcccccCHHHHHHHHHHh------CCCCHHHH
Confidence 322111 1111111 11454 99999999998888999998875 22 1111100111 02233323
Q ss_pred hHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCC---------eEeecCC------------------------
Q 011842 350 APIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGI---------SAMLNEL------------------------ 396 (476)
Q Consensus 350 ~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~---------~~~~~~~------------------------ 396 (476)
...++.++++.+...|.++++++..+++++++++|++.+. ..+..+.
T Consensus 427 ~iaal~aA~~~l~~~gg~~~~~~~~~~a~~~r~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (755)
T 2vyc_A 427 ICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYDFADAPTKLLTTV 506 (755)
T ss_dssp HHHHHHHHHHHHSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEESSCSEEECTTTCCEEEGGGSCHHHHHHC
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccccccccccceeeccCchhccccccccccccccccchhccch
Confidence 3344556667666565678999999999999999988532 2211110
Q ss_pred --------------------------eeEEEEecCC------------c-HH---Hhhceeec---ccCCEEEEEEcCCC
Q 011842 397 --------------------------SSTVVFERPQ------------D-EE---FVRRWQLA---CQGNIAHVVVMPNV 431 (476)
Q Consensus 397 --------------------------~~iv~f~~~~------------~-~~---~~~~~~l~---~~~~~lRv~~~~~~ 431 (476)
...+.|..++ + .+ +++...+. ...+.+|+++++.+
T Consensus 507 ~~~~~~~~~~~~h~~~~~~~~~~~~Dp~~v~i~~~~~~~~G~~~~~g~~~~~l~~~L~~~gI~~e~~~~~~v~~~~~~g~ 586 (755)
T 2vyc_A 507 QDCWVMHPGESWHGFKDIPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLGRHGIVPTRTTDFQIMFLFSMGV 586 (755)
T ss_dssp GGGTBCCTTCTTTCCTTCCTTSEEECTTEEEEECSCBCTTSSBCSSCCCHHHHHHHHHTTTCCCSEECSSEEEEECCTTC
T ss_pred hhhhccCcccccccccccCCCccccCCeEEEEEcCCCCCCCCccccCCcHHHHHHHHHHCCCEEeecCCCeEEEEECCCC
Confidence 1245565542 0 11 22223332 24578999999999
Q ss_pred CHHHHHHHHHHHHHHHHHHH
Q 011842 432 TIDKLDDFLNELIENRSTWY 451 (476)
Q Consensus 432 T~edid~~~~~l~~~~~~~~ 451 (476)
|++++++++++|.++.+.+-
T Consensus 587 t~~~~~~l~~al~~~~~~~~ 606 (755)
T 2vyc_A 587 TRGKWGTLVNTLCSFKRHYD 606 (755)
T ss_dssp CTTTTHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999977653
No 119
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=99.90 E-value=6.6e-22 Score=196.51 Aligned_cols=268 Identities=12% Similarity=0.010 Sum_probs=196.0
Q ss_pred HHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccCHH
Q 011842 143 GVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCA 222 (476)
Q Consensus 143 ~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~~ 222 (476)
++++.+++++|.+++ .+++|+|+++++..++.+. +++.|+++.++|.++...++..|++++.+|.++++.+|++
T Consensus 55 ~lr~~la~~~~~~~~--~i~~t~G~~~~l~~~~~~~----~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~ 128 (337)
T 3p1t_A 55 RVMRKLAEHFSCPED--NLMLVRGIDECFDRISAEF----SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLTDDLLLDPN 128 (337)
T ss_dssp HHHHHHHHHHTSCGG--GEEEESHHHHHHHHHHHHS----TTSEEEEESSSCSHHHHHHTTSCCEEEEECBCTTSSBCHH
T ss_pred HHHHHHHHHhCcCHH--HEEEeCCHHHHHHHHHHhc----CCCeEEEeCCCcHHHHHHHHHcCCEEEEecCCCCCCCCHH
Confidence 344556667788643 5999999999998887764 8899999999999999999999999999999888899999
Q ss_pred HHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCcccccEEE
Q 011842 223 DFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKPIGSVS 302 (476)
Q Consensus 223 ~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~~Dsi~ 302 (476)
+|+++ .+ +.++++++++|++|.+.|+++|.++|++++. +++|++|+.+.... .. .... ...+++.
T Consensus 129 ~l~~~--~~---~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~------~ivDea~~~~~~~~-~~--~~~~-~~~~i~~ 193 (337)
T 3p1t_A 129 DLAQV--SR---DDCVVLANPSNPTGQALSAGELDQLRQRAGK------LLIDETYVDYSSFR-AR--GLAY-GENELVF 193 (337)
T ss_dssp HHTTC--CT---TEEEEEESSCTTTCCCCCHHHHHHHHHHCSE------EEEECTTGGGSSCS-SS--CCCC-BTTEEEE
T ss_pred HHHhh--cC---CCEEEEeCCCCCCCCCCCHHHHHHHHHhCCc------EEEECCChhhcccc-cc--cccc-CCCEEEE
Confidence 99875 22 3488889999999999999999999999986 45599998543211 11 1111 2257888
Q ss_pred EcCCCCCC-CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhCh-hcHHHHHHHHHHHHHHH
Q 011842 303 VSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGY-KGFQKEVQKCLRNAHYL 380 (476)
Q Consensus 303 ~s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~-~g~~~~~~~~~~~a~~l 380 (476)
.|++|+++ .++++|+++.++++++.+.....+ ++. ..+.+.++...+.. +.+.+.+++..++++++
T Consensus 194 ~S~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~~---------~~~---~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l 261 (337)
T 3p1t_A 194 RSFSKSYGLAGLRLGALFGPSELIAAMKRKQWF---------CNV---GTLDLHALEAALDNDRAREAHIAKTLAQRRRV 261 (337)
T ss_dssp EESSSTTCCTTTCCEEEECCHHHHHHHHTTSCT---------TCS---CHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH
T ss_pred eeCchhccCcchheEEEEeCHHHHHHHHhhcCC---------CCC---CHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 99999996 789999999998877666432111 111 12344444444432 34677788888899999
Q ss_pred HHHHHhcCCeEeecCCeeEEEEecCCcHHHh-----hceeecc-----cCCEEEEEEcCCCCHHHHHHHHHHHHHHH
Q 011842 381 KDRLLDAGISAMLNELSSTVVFERPQDEEFV-----RRWQLAC-----QGNIAHVVVMPNVTIDKLDDFLNELIENR 447 (476)
Q Consensus 381 ~~~L~~~g~~~~~~~~~~iv~f~~~~~~~~~-----~~~~l~~-----~~~~lRv~~~~~~T~edid~~~~~l~~~~ 447 (476)
.+.|++.|+.. .++..+++.|..++...+. +++.+.. ..+.+|++++ |++++++++++|+++.
T Consensus 262 ~~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~iRis~~---~~~~~~~l~~al~~~~ 334 (337)
T 3p1t_A 262 ADALRGLGYRV-ASSEANFVLVENAAGERTLRFLRERGIQVKDAGQFGLHHHIRISIG---REEDNDRLLAALAEYS 334 (337)
T ss_dssp HHHHHHTTCCB-CCCSSSEEEEECTTTHHHHHHHHHTTEECEEGGGGTCCSEEEEECC---CHHHHHHHHHHHHHHT
T ss_pred HHHHHHCcCEE-CCCCCeEEEEEcCCHHHHHHHHHHCCeEEEECccCCCCCeEEEecC---CHHHHHHHHHHHHHHh
Confidence 99999987643 4555667777766543332 2333321 1478999976 7999999999998764
No 120
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=99.90 E-value=4.1e-22 Score=200.40 Aligned_cols=270 Identities=11% Similarity=0.036 Sum_probs=192.9
Q ss_pred HHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccCHH
Q 011842 143 GVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCA 222 (476)
Q Consensus 143 ~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~~ 222 (476)
++++++++++|.+++ .+++|+|||+|+..++.+... ||+.|+++.++|.++...++..|++++.+|.++++.+ +
T Consensus 69 ~lr~~la~~~g~~~~--~i~~t~g~~~al~~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~--~ 142 (360)
T 3hdo_A 69 KLREVAGELYGFDPS--WIIMANGSDEVLNNLIRAFAA--EGEEIGYVHPSYSYYGTLAEVQGARVRTFGLTGDFRI--A 142 (360)
T ss_dssp HHHHHHHHHHTCCGG--GEEEESSHHHHHHHHHHHHCC--TTCEEEEESSSCTHHHHHHHHHTCEEEEECBCTTSSB--T
T ss_pred HHHHHHHHHhCcCcc--eEEEcCCHHHHHHHHHHHHhC--CCCEEEEcCCChHHHHHHHHHCCCEEEEeeCCCCCCH--H
Confidence 344456666776543 599999999999999988765 8999999999999999999999999999999876665 4
Q ss_pred HHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCc--ccccE
Q 011842 223 DFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFK--KPIGS 300 (476)
Q Consensus 223 ~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~--~~~Ds 300 (476)
++++.+ ++ .+++++++.|++|.+.|+++|.++|+++|+ ++++|++|+.+... ...... ...++
T Consensus 143 ~l~~~~--~~---~~v~i~~p~nptG~~~~~~~l~~l~~~~~~-----~li~De~~~~~~~~-----~~~~~~~~~~~~i 207 (360)
T 3hdo_A 143 GFPERY--EG---KVFFLTTPNAPLGPSFPLEYIDELARRCAG-----MLVLDETYAEFAES-----NALELVRRHENVV 207 (360)
T ss_dssp TCCSSB--CS---SEEEEESSCTTTCCCCCHHHHHHHHHHBSS-----EEEEECTTGGGSSC-----CCTHHHHHCSSEE
T ss_pred HHHhhc--CC---CEEEEeCCCCCCCCCcCHHHHHHHHHHCCC-----EEEEECChHhhCCc-----chhHHhccCCCEE
Confidence 433221 12 377788899999999999999999999999 99999999864211 111111 12457
Q ss_pred EEEcCCCCCC-CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhC-hhcHHHHHHHHHHHHH
Q 011842 301 VSVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKG-YKGFQKEVQKCLRNAH 378 (476)
Q Consensus 301 i~~s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g-~~g~~~~~~~~~~~a~ 378 (476)
+..+++|+++ .++++|++++++++.+.+...... .+. ..+.++++...+. .+.+++..++..++++
T Consensus 208 ~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~---------~~~---~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 275 (360)
T 3hdo_A 208 VTRTLSKSYSLAGMRIGLAIARPEVIAALDKIRDH---------YNL---DRLAQAACVAALRDQAYLSECCRRIRETRE 275 (360)
T ss_dssp EEEESTTTTSCTTSCCEEEECCHHHHHHHHHHSCS---------CCS---CHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred EEecchHhhcCCccceeeEeeCHHHHHHHHHhCCC---------CCC---CHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 7789999985 678999999988776655321111 111 2344444443332 3346788888999999
Q ss_pred HHHHHHHhcCCeEeecCCeeEEEEecCC--cHHHh-----hceeecc-----cCCEEEEEEcCCCCHHHHHHHHHHHHHH
Q 011842 379 YLKDRLLDAGISAMLNELSSTVVFERPQ--DEEFV-----RRWQLAC-----QGNIAHVVVMPNVTIDKLDDFLNELIEN 446 (476)
Q Consensus 379 ~l~~~L~~~g~~~~~~~~~~iv~f~~~~--~~~~~-----~~~~l~~-----~~~~lRv~~~~~~T~edid~~~~~l~~~ 446 (476)
++.+.|++.++. +.++..+++.+..+. ..++. +++.+.. ..+.+|++++ |++|+|+|+++|+++
T Consensus 276 ~l~~~L~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~~~~~iRis~~---~~~e~~~l~~al~~~ 351 (360)
T 3hdo_A 276 WFTTELRSIGYD-VIPSQGNYLFATPPDRDGKRVYDGLYARKVLVRHFSDPLLAHGMRISIG---TREEMEQTLAALKEI 351 (360)
T ss_dssp HHHHHHHHTTCE-ECCCSSSEEEEECTTCCHHHHHHHHHHTTEECBCCCSTTTTTSEEEECC---CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCE-EcCCCccEEEEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCEEEEEcC---CHHHHHHHHHHHHHH
Confidence 999999998764 345566667676653 23332 2333322 2378999976 999999999999987
Q ss_pred HHH
Q 011842 447 RST 449 (476)
Q Consensus 447 ~~~ 449 (476)
.+.
T Consensus 352 ~~~ 354 (360)
T 3hdo_A 352 GEG 354 (360)
T ss_dssp HC-
T ss_pred hcc
Confidence 643
No 121
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.90 E-value=2.8e-22 Score=209.57 Aligned_cols=290 Identities=13% Similarity=0.075 Sum_probs=183.5
Q ss_pred HHHHHHHHHHHHHHcCCCCCcc-cEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHH--------HHHHHcCCeE
Q 011842 138 RQFEVGVLDWFARLWELENNEY-WGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVF--------KAARMYRMEC 208 (476)
Q Consensus 138 ~~le~~~~~~la~l~g~~~~~~-~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~--------~~~~~~G~~v 208 (476)
.++|+.+++++++++|.+.++. ..+++++||+||+.++.+... |||.|+++++.|.+.. ..+.+.|..+
T Consensus 99 ~~lE~~a~~~~a~l~g~~~~~~~~~v~~~sGt~An~~al~al~~--pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~ 176 (490)
T 2a7v_A 99 DEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQ--PHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFF 176 (490)
T ss_dssp THHHHHHHHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHCC--SCEECCC---------------------------
T ss_pred HHHHHHHHHHHHHHcCCCcccCceEEeCCchHHHHHHHHHHHcC--CCCEecccCccccccccchhhhcchhHHHcCCeE
Confidence 4889899999999999986432 235566999999999998866 9999999998885432 1334556544
Q ss_pred --EEEeCC-CCCccCHHHHHHHHHc-CCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCccccccc
Q 011842 209 --VKVDCL-ISGEIDCADFKAKLLQ-NKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMP 284 (476)
Q Consensus 209 --~~v~~~-~~g~~D~~~Le~~l~~-~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~ 284 (476)
+.++++ +++.+|+++|++++.+ +++ +|+++.+ ..|...|+++|.++|++||+ ++|+|+||+.+...
T Consensus 177 ~~~~~~vd~~~~~iD~d~le~~l~~~~~k---lIi~~~s--~~~~~~dl~~i~~ia~~~g~-----~livD~Ah~~glv~ 246 (490)
T 2a7v_A 177 ESMPYKLNPKTGLIDYNQLALTARLFRPR---LIIAGTS--AYARLIDYARMREVCDEVKA-----HLLADMAHISGLVA 246 (490)
T ss_dssp ----CCBCTTTCSBCHHHHHHHHHHHCCS---EEEECCS--SCCSCCCHHHHHHHHHHTTC-----EEEEECGGGHHHHH
T ss_pred EEEecccccccCCcCHHHHHHHHhhcCCc---EEEEcCC--CCCCcccHHHHHHHHHHcCC-----EEEEcccccccccc
Confidence 444555 4689999999999975 343 6665433 34567899999999999999 99999998744332
Q ss_pred ccccCCCCCCcccccEEEEcCCCCCCCCCCceeEEeehhhh---------------hhhcCCccccCCCCCcccCCCCCh
Q 011842 285 FVKKAPKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHI---------------NVLSSNVEYLASRDATIMGSRNGH 349 (476)
Q Consensus 285 ~~~~~~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~---------------~~l~~~~~yl~~~~~~~~~sr~~~ 349 (476)
.......+ ..+|++++++||++++|. .|+++++++.. +.+. ..++ ....++....
T Consensus 247 ~g~~~~~~---~~aDiv~~S~hK~l~Gp~-GG~i~~~~~~~~~~~~~~~~~~~~l~~~i~---~~~~---~g~qggp~~~ 316 (490)
T 2a7v_A 247 AKVIPSPF---KHADIVTTTTHKTLRGAR-SGLIFYRKGVKAVDPKTGREIPYTFEDRIN---FAVF---PSLQGGPHNH 316 (490)
T ss_dssp TTSSCCGG---GTCSEEEEESSGGGCSCS-CEEEEEECSEEEEETTTEEEEECCCHHHHH---HHHT---TTTCCSCCHH
T ss_pred CCcCCCCC---CCCCEEEECCcccCcccc-chheeeccchhcccccccchhhHHHHHHHH---HHhc---ccCCCCchHH
Confidence 21111112 248999999999998665 59999887521 1111 0111 1123333322
Q ss_pred hHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeec-CCeeEEEEecCC----cHHH---hh--ceeec--
Q 011842 350 APIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLN-ELSSTVVFERPQ----DEEF---VR--RWQLA-- 417 (476)
Q Consensus 350 ~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~-~~~~iv~f~~~~----~~~~---~~--~~~l~-- 417 (476)
...++.++++......++++.++.++++++|.+.|++.|+.++.+ ..++++.+.... ..++ ++ ++.+.
T Consensus 317 ~iaAla~Al~~~~~~~~~~~~~~~~~na~~L~~~L~~~G~~v~~~~t~t~lv~vdl~~~g~~~~~~~~~L~~~GI~v~~~ 396 (490)
T 2a7v_A 317 AIAAVAVALKQACTPMFREYSLQVLKNARAMADALLERGYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKN 396 (490)
T ss_dssp HHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECTTTTCCHHHHHHHHHHTTEECEEE
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHcCcEEecCCCCCeEEEEEeCCCCCCHHHHHHHHHhCCeEEecC
Confidence 233344455544344668889999999999999999998866543 335677666432 1222 11 22221
Q ss_pred --------ccCCEEEEEE----cCCCCHHHHHHHHHHHHHHHHH
Q 011842 418 --------CQGNIAHVVV----MPNVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 418 --------~~~~~lRv~~----~~~~T~edid~~~~~l~~~~~~ 449 (476)
.....+|+.+ +...+++|++++++.|.++.+.
T Consensus 397 ~~p~d~~p~~~~~iRig~~a~t~~g~~~~d~~~~~~~i~~~l~~ 440 (490)
T 2a7v_A 397 TCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVNI 440 (490)
T ss_dssp CCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCCCCCCCceEecccccccCCCCHHHHHHHHHHHHHHHHh
Confidence 1236799954 5678999999999999888754
No 122
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=99.90 E-value=1.1e-21 Score=196.81 Aligned_cols=272 Identities=13% Similarity=0.005 Sum_probs=198.1
Q ss_pred HHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccCHH
Q 011842 143 GVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCA 222 (476)
Q Consensus 143 ~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~~ 222 (476)
++++++++++|.+++ .+++|+|||+|+..++.++ +.|+++.++|.++...++..|++++.+|.++++.+|++
T Consensus 65 ~l~~~la~~~~~~~~--~i~~~~g~t~al~~~~~~~------d~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 136 (361)
T 3ftb_A 65 RLNKSIENYLKLKDI--GIVLGNGASEIIELSISLF------EKILIIVPSYAEYEINAKKHGVSVVFSYLDENMCIDYE 136 (361)
T ss_dssp HHHHHHHHHHTCCSC--EEEEESSHHHHHHHHHTTC------SEEEEEESCCTHHHHHHHHTTCEEEEEECCTTSCCCHH
T ss_pred HHHHHHHHHhCCCcc--eEEEcCCHHHHHHHHHHHc------CcEEEecCChHHHHHHHHHcCCeEEEeecCcccCCCHH
Confidence 344556666787653 4999999999999887765 68999999999999999999999999999988889999
Q ss_pred HHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCC--ccc
Q 011842 223 DFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSF--KKP 297 (476)
Q Consensus 223 ~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~--~~~ 297 (476)
+|++++.+ ++ +|++++++|++|.+.| +++|+++|++||+ ++++|++|+.+... ........ ...
T Consensus 137 ~l~~~l~~-~~---~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~-----~li~De~~~~~~~~--~~~~~~~~~~~~~ 205 (361)
T 3ftb_A 137 DIISKIDD-VD---SVIIGNPNNPNGGLINKEKFIHVLKLAEEKKK-----TIIIDEAFIEFTGD--PSSSFVGEIKNYS 205 (361)
T ss_dssp HHHHHTTT-CS---EEEEETTBTTTTBCCCHHHHHHHHHHHHHHTC-----EEEEECSSGGGTCC--TTSSSGGGTTTCS
T ss_pred HHHHhccC-CC---EEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCC-----EEEEECcchhhcCC--cccchhHhcccCC
Confidence 99999976 54 7888899999999965 6778888889999 99999999876553 11111111 112
Q ss_pred ccEEEEcCCCCCC-CCCCceeEE-eehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhC-hhcHHHHHHHHH
Q 011842 298 IGSVSVSGHKFVG-CPMPCGVQI-TRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKG-YKGFQKEVQKCL 374 (476)
Q Consensus 298 ~Dsi~~s~hK~l~-~p~~~G~l~-~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g-~~g~~~~~~~~~ 374 (476)
.+++..+++|+++ .+.++|+++ .++++.+.+.....+ .+ ...+.++++...+. .+.+++..++..
T Consensus 206 ~~i~~~s~sK~~~~~G~r~g~~~~~~~~~~~~~~~~~~~---------~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~ 273 (361)
T 3ftb_A 206 CLFIIRAMTKFFAMPGIRFGYGITNNKEIAAKIKAKQNP---------WN---INCFAEMAAINCLKDTNYIEESLLWIK 273 (361)
T ss_dssp SEEEEEESSSTTSCGGGCCEEEEESCHHHHHHHHTTSCT---------TC---SCHHHHHHHHHTSSCHHHHHHHHHHHH
T ss_pred CEEEEeeChhhcCCCCcceeEEEeCCHHHHHHHHhhCCC---------CC---CCHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 3466789999987 678899998 666666655332211 11 12355555555543 345678888889
Q ss_pred HHHHHHHHHHHhcCCeE-eecCCeeEEEEecCC--cHHHh-----hceeecc-------cCCEEEEEEcCCCCHHHHHHH
Q 011842 375 RNAHYLKDRLLDAGISA-MLNELSSTVVFERPQ--DEEFV-----RRWQLAC-------QGNIAHVVVMPNVTIDKLDDF 439 (476)
Q Consensus 375 ~~a~~l~~~L~~~g~~~-~~~~~~~iv~f~~~~--~~~~~-----~~~~l~~-------~~~~lRv~~~~~~T~edid~~ 439 (476)
++++++.+.|++.+... +.++..+++.+..+. ..++. +++.+.. ..+.+|++++ +.++++++
T Consensus 274 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~iRis~~---~~~~~~~l 350 (361)
T 3ftb_A 274 KERKRFIEELNKIGFIKRVFSPHANFVLCRLENISGEKLYDSLLKEDIVIRRCCNFIGLDDSFVRFAIK---DEKKNTKF 350 (361)
T ss_dssp HHHHHHHHHHHHSSSEEEEECCSSSEEEEEESSSCHHHHHHHHHTTTEECEECTTSTTCCTTEEEEECC---CHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCceecCCCCeEEEEEcCCCCHHHHHHHHHHCCeEEeeCccCCCCCCCEEEEEcC---CHHHHHHH
Confidence 99999999999985544 556666677777653 23332 2333321 2478999875 89999999
Q ss_pred HHHHHHHHH
Q 011842 440 LNELIENRS 448 (476)
Q Consensus 440 ~~~l~~~~~ 448 (476)
+++|+++.+
T Consensus 351 ~~~l~~~~~ 359 (361)
T 3ftb_A 351 LRALKGVEN 359 (361)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999988764
No 123
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=99.90 E-value=4.3e-22 Score=204.11 Aligned_cols=272 Identities=13% Similarity=0.116 Sum_probs=197.6
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHH----HHHHcCCeEEEEeCC
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFK----AARMYRMECVKVDCL 214 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~----~~~~~G~~v~~v~~~ 214 (476)
...+++++.+++++|.+ ..++++||++|+..++.+... ||+.|+++.+.|.++.. .++..|++++.+|.+
T Consensus 62 ~~~~~l~~~ia~~~g~~----~~i~~~~g~~ai~~~~~~l~~--~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~ 135 (404)
T 1e5e_A 62 PTVSNLEGKIAFLEKTE----ACVATSSGMGAIAATVLTILK--AGDHLISDECLYGCTHALFEHALTKFGIQVDFINTA 135 (404)
T ss_dssp HHHHHHHHHHHHHHTCS----EEEEESSHHHHHHHHHHHHCC--TTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT
T ss_pred hHHHHHHHHHHHHhCCC----cEEEeCChHHHHHHHHHHHhC--CCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCC
Confidence 34445666677788875 278888999999998887755 89999999999999887 788899999999986
Q ss_pred CCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHH-hCCCCCceEEEEecCcccccccccccCCCCC
Q 011842 215 ISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEE-SGFTQDRFYIHCDGALFGLMMPFVKKAPKVS 293 (476)
Q Consensus 215 ~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~-~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~ 293 (476)
|+++|++++.+++ .+|++++++|++|.+.|+++|+++|++ ||+ ++++|++|+.+.+.. . +.
T Consensus 136 -----d~~~l~~~i~~~t---~~v~l~~p~NptG~v~~l~~i~~la~~~~~~-----~li~De~~~~~~~~~--~---~~ 197 (404)
T 1e5e_A 136 -----IPGEVKKHMKPNT---KIVYFETPANPTLKIIDMERVCKDAHSQEGV-----LVIADNTFCSPMITN--P---VD 197 (404)
T ss_dssp -----STTHHHHHCCTTE---EEEEEESSCTTTCCCCCHHHHHHHHHTSTTC-----EEEEECTTTCTTTCC--G---GG
T ss_pred -----CHHHHHHhcCCCC---cEEEEECCCCCCCcccCHHHHHHHHHhhcCC-----EEEEECCCchhhhCC--c---cc
Confidence 8889999987554 488889999999999999999999999 999 999999998765421 0 11
Q ss_pred CcccccEEEEcCCCCCCCC-CC-ceeEEeehhhhh-hhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHH
Q 011842 294 FKKPIGSVSVSGHKFVGCP-MP-CGVQITRMEHIN-VLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEV 370 (476)
Q Consensus 294 ~~~~~Dsi~~s~hK~l~~p-~~-~G~l~~~~~~~~-~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~ 370 (476)
..+|+++.|+||+++.| ++ +|+++++++.++ .+.....+.. ++. ...+.+|+++..+ +.+..++
T Consensus 198 --~~~di~~~S~sK~~~~~g~ri~G~~~~~~~~~~~~l~~~~~~~~-------g~~--~~~~~~~~~~~~l--~~~~~~~ 264 (404)
T 1e5e_A 198 --FGVDVVVHSATKYINGHTDVVAGLICGKADLLQQIRMVGIKDIT-------GSV--ISPHDAWLITRGL--STLNIRM 264 (404)
T ss_dssp --GTCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTCCCCCC-------CCC--CCHHHHHHHHHHH--TTHHHHH
T ss_pred --cCCEEEEEcCccccCCCCCCeEEEEEECHHHHHHHHHHHHHhCC-------CCC--CCHHHHHHHHHhH--hHHHHHH
Confidence 24899999999988865 44 499999988766 5543222210 111 2246677766665 3456677
Q ss_pred HHHHHHHHHHHHHHHhcCCeE-e-ec------------C----CeeEEEEecCCc-H---HHhhceee--c---------
Q 011842 371 QKCLRNAHYLKDRLLDAGISA-M-LN------------E----LSSTVVFERPQD-E---EFVRRWQL--A--------- 417 (476)
Q Consensus 371 ~~~~~~a~~l~~~L~~~g~~~-~-~~------------~----~~~iv~f~~~~~-~---~~~~~~~l--~--------- 417 (476)
++..++++.+.+.|++.+... + .+ + ..+++.|..++. + .+.++..+ .
T Consensus 265 ~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~i~~~~~s~G~~~s 344 (404)
T 1e5e_A 265 KAESENAMKVAEYLKSHPAVEKVYYPGFEDHEGHDIAKKQMRMYGSMITFILKSGFEGAKKLLDNLKLITLAVSLGGCES 344 (404)
T ss_dssp HHHHHHHHHHHHHHHTCTTEEEEECTTCSSSTTHHHHHHHCSSCCSEEEEEETTHHHHHHHHHHTCSSSEESSCCCSSSC
T ss_pred HHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEeCCCHHHHHHHHHhCCCceeccCCCCcce
Confidence 777888888888888775211 1 11 1 167788876643 1 22322221 0
Q ss_pred ----c---------------c---CCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 011842 418 ----C---------------Q---GNIAHVVVMPNVTIDKLDDFLNELIENRSTWY 451 (476)
Q Consensus 418 ----~---------------~---~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~ 451 (476)
| . .+.+|+++.. |++++++++|+++.+...
T Consensus 345 l~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~----e~~~~li~~l~~al~~~~ 396 (404)
T 1e5e_A 345 LIQHPASMTHAVVPKEEREAAGITDGMIRLSVGI----EDADELIADFKQGLDALL 396 (404)
T ss_dssp EEECGGGTTTTTSCHHHHHHTTCCTTEEEEECCS----SCHHHHHHHHHHHHHHHH
T ss_pred eeecccccccccCCHHHHHhcCCCCCeEEEEeCC----CCHHHHHHHHHHHHHHHH
Confidence 0 1 3689998875 899999999999887654
No 124
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.90 E-value=1e-21 Score=199.42 Aligned_cols=284 Identities=13% Similarity=0.037 Sum_probs=191.9
Q ss_pred HHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHH-HhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCC-CccC
Q 011842 143 GVLDWFARLWELENNEYWGYITNCGTEGNLHGILVG-REVFPDGILYASRESHYSVFKAARMYRMECVKVDCLIS-GEID 220 (476)
Q Consensus 143 ~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa-~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~-g~~D 220 (476)
++++.+++++|.+. .+++++||+|+..++.++ .. |++.|+++.++|.++..+++..|++++.++++++ +.+|
T Consensus 42 ~l~~~la~~~~~~~----~i~~~sGt~al~~~l~~l~~~--~gd~Vi~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~d 115 (388)
T 1b9h_A 42 SFEREFAAHHGAAH----ALAVTNGTHALELALQVMGVG--PGTEVIVPAFTFISSSQAAQRLGAVTVPVDVDAATYNLD 115 (388)
T ss_dssp HHHHHHHHHTTCSE----EEEESCHHHHHHHHHHHTTCC--TTCEEEEESSSCTHHHHHHHHTTCEEEEECBCTTTCCBC
T ss_pred HHHHHHHHHhCCCe----EEEeCCHHHHHHHHHHHcCCC--CcCEEEECCCccHHHHHHHHHcCCEEEEEecCCCcCCCC
Confidence 44555777788752 445555699999998887 33 8899999999999999999999999999999864 8899
Q ss_pred HHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCcccccE
Q 011842 221 CADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKPIGS 300 (476)
Q Consensus 221 ~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~~Ds 300 (476)
+++|+++|.+++ .+|+ +++++|.+.|+++|.++|++||+ ++|+|++|+.+..+.......+ ..+++
T Consensus 116 ~~~l~~~i~~~~---~~v~---~~n~tG~~~~l~~i~~la~~~~~-----~li~D~a~~~g~~~~~~~~~~~---~~i~~ 181 (388)
T 1b9h_A 116 PEAVAAAVTPRT---KVIM---PVHMAGLMADMDALAKISADTGV-----PLLQDAAHAHGARWQGKRVGEL---DSIAT 181 (388)
T ss_dssp HHHHHHHCCTTE---EEEC---CBCGGGCCCCHHHHHHHHHHHTC-----CBCEECTTCTTCEETTEEGGGS---SSCEE
T ss_pred HHHHHHhcCcCc---eEEE---EeCCccCcCCHHHHHHHHHHcCC-----EEEEecchhcCCccCCeecccc---cceEE
Confidence 999999996543 2444 67788999999999999999999 9999999985443211111111 12678
Q ss_pred EEEcCCCCCCCCCCceeEEeehh-h--hhhhcCCccccCCC-CCcc----cCCCCChhHHHHHHHHHHhChhcHHHHHHH
Q 011842 301 VSVSGHKFVGCPMPCGVQITRME-H--INVLSSNVEYLASR-DATI----MGSRNGHAPIFLWYTLNRKGYKGFQKEVQK 372 (476)
Q Consensus 301 i~~s~hK~l~~p~~~G~l~~~~~-~--~~~l~~~~~yl~~~-~~~~----~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~ 372 (476)
++++.||++++ .++|+++++++ + .+.+.....+-... ...+ .++......+..++.+.. .+.+++.+++
T Consensus 182 ~S~s~~K~l~g-~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~--~~~l~~~~~~ 258 (388)
T 1b9h_A 182 FSFQNGKLMTA-GEGGAVVFPDGETEKYETAFLRHSCGRPRDDRRYFHKIAGSNMRLNEFSASVLRAQ--LARLDEQIAV 258 (388)
T ss_dssp EECCTTSSSCS-SSCEEEEECTTCHHHHHHHHHHTBTTCCTTCSSCCCCSCCCBCBCBHHHHHHHHHH--HTTHHHHHHH
T ss_pred EEccCCCcccC-CCeEEEEECCHHHHHHHHHHHHHhCCCCccCccceeecccccCCcCHHHHHHHHHH--HHHHHHHHHH
Confidence 88889999975 46899998876 4 44432111110000 0001 112111223333333332 3457778888
Q ss_pred HHHHHHHHHHHHHhc-CCeEeec------CCeeEEEEecCC----c-HHHhh-----ceeec-----c------------
Q 011842 373 CLRNAHYLKDRLLDA-GISAMLN------ELSSTVVFERPQ----D-EEFVR-----RWQLA-----C------------ 418 (476)
Q Consensus 373 ~~~~a~~l~~~L~~~-g~~~~~~------~~~~iv~f~~~~----~-~~~~~-----~~~l~-----~------------ 418 (476)
..++++++.+.|++. ++....+ ...+++.|..+. + .++.+ ++.+. .
T Consensus 259 ~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~ 338 (388)
T 1b9h_A 259 RDERWTLLSRLLGAIDGVVPQGGDVRADRNSHYMAMFRIPGLTEERRNALVDRLVEAGLPAFAAFRAIYRTDAFWELGAP 338 (388)
T ss_dssp HHHHHHHHHHHHHTSTTCEECCCCTTCCBCCCSEEEEECTTCCHHHHHHHHHHHHHTTCCEEECCCCGGGSHHHHHSSCC
T ss_pred HHHHHHHHHHHhccCCCccccCCCcCCCccceEEEEEEeCCcCcccHHHHHHHHHHCCCCcccccCccccChHhHhcCCC
Confidence 889999999999987 5543321 224677777763 1 22221 22221 0
Q ss_pred -----------------cCCEEEEEEcCCC-CHHHHHHHHHHHHHHHHH
Q 011842 419 -----------------QGNIAHVVVMPNV-TIDKLDDFLNELIENRST 449 (476)
Q Consensus 419 -----------------~~~~lRv~~~~~~-T~edid~~~~~l~~~~~~ 449 (476)
....+|+++++.+ |++|||+++++|+++.++
T Consensus 339 ~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~t~edi~~~~~~l~~~~~~ 387 (388)
T 1b9h_A 339 DESVDAIARRCPNTDAISSDCVWLHHRVLLAGEPELHATAEIIADAVAR 387 (388)
T ss_dssp SSCHHHHHHTCHHHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHHHHHHH
T ss_pred cccccccccCCHHHHHHHhCeEEecCCCCCCCHHHHHHHHHHHHHHHhh
Confidence 0136899999999 999999999999987653
No 125
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.90 E-value=7e-22 Score=201.40 Aligned_cols=288 Identities=12% Similarity=0.075 Sum_probs=198.9
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHH-H--HHHcC--CeEEE
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFK-A--ARMYR--MECVK 210 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~-~--~~~~G--~~v~~ 210 (476)
...++++++++++++++|.++. .+++++||+|+..++.++.. +++.|+++.++|.++.. . +...| ++++.
T Consensus 66 ~~~~l~~~~r~~la~~~g~~~~---~i~~~sGt~a~~~a~~~~~~--~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~ 140 (405)
T 2vi8_A 66 YVDIVEELARERAKQLFGAEHA---NVQPHSGAQANMAVYFTVLE--HGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVA 140 (405)
T ss_dssp HHHHHHHHHHHHHHHHHTCSEE---ECCCSSHHHHHHHHHHHHCC--TTCEEEEECGGGTCCTTTTCTTSHHHHHSEEEE
T ss_pred HHHHHHHHHHHHHHHHhCCCce---EEEecCcHHHHHHHHHHhcC--CCCEEEEecccccchhcccchhhhccceeEEEe
Confidence 3567888889999999998731 34455669999999988854 89999999999987643 1 12334 37777
Q ss_pred EeCC-CCCccCHHHHHHHHHc-CCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCccccccccccc
Q 011842 211 VDCL-ISGEIDCADFKAKLLQ-NKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKK 288 (476)
Q Consensus 211 v~~~-~~g~~D~~~Le~~l~~-~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~ 288 (476)
++++ .++.+|+++|++++++ +++ +|+++ + +..|...++++|.++|++||+ ++|+|++|+.+..+....
T Consensus 141 ~~~~~~~~~~d~~~l~~~i~~~~~~---~v~~~-~-~~~~~~~~l~~i~~l~~~~~~-----~li~Dea~~~g~~~~~~~ 210 (405)
T 2vi8_A 141 YGVDPETHVIDYDDVREKARLHRPK---LIVAA-A-AAYPRIIDFAKFREIADEVGA-----YLMVDMAHIAGLVAAGLH 210 (405)
T ss_dssp ECBCTTTCSBCHHHHHHHHHHHCCS---EEEEC-C-SSCCSCCCHHHHHHHHHHHTC-----EEEEECTTTHHHHHTTSS
T ss_pred cccccccCCcCHHHHHHHHHhcCCe---EEEEe-C-CCCCccCCHHHHHHHHHHcCC-----EEEEEccccccccccCcC
Confidence 8775 5688999999999986 554 55553 3 334677789999999999999 999999998543322111
Q ss_pred CCCCCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCc-cccCCCCCcccCCCCChhHHHHHHHHHHhChhcHH
Q 011842 289 APKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNV-EYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQ 367 (476)
Q Consensus 289 ~~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~-~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~ 367 (476)
. ... ..+|+++.++||++++|.+ |++++++++.+.+.... .+. .++.+......+.++++.....+++
T Consensus 211 ~--~~~-~~~di~~~s~sK~~~g~~g-G~~~~~~~~~~~l~~~~~~~~-------~~~~~~~~~aa~~~al~~~~~~~~~ 279 (405)
T 2vi8_A 211 P--NPV-PYAHFVTTTTHKTLRGPRG-GMILCQEQFAKQIDKAIFPGI-------QGGPLMHVIAAKAVAFGEALQDDFK 279 (405)
T ss_dssp C--CST-TTCSEEEEESSSTTCCCSC-EEEEECHHHHHHHHHHHTTTT-------CSSCCHHHHHHHHHHHHHHHSHHHH
T ss_pred C--Ccc-ccCCEEEEeccccCCCCCC-eEEEEcHHHHHHHHhhhcccc-------cCCCCHHHHHHHHHHHHHHHhhhHH
Confidence 1 111 2478999999999987777 99999877665543211 111 1222212223334455554445778
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCeEeecC-CeeEEEEecCC----cHHHh-----hceeecc-----------cCCEEEEE
Q 011842 368 KEVQKCLRNAHYLKDRLLDAGISAMLNE-LSSTVVFERPQ----DEEFV-----RRWQLAC-----------QGNIAHVV 426 (476)
Q Consensus 368 ~~~~~~~~~a~~l~~~L~~~g~~~~~~~-~~~iv~f~~~~----~~~~~-----~~~~l~~-----------~~~~lRv~ 426 (476)
+..++..++++++.+.|++.|+....++ ..+++.+..+. ...+. +++.+.. ..+.+|++
T Consensus 280 ~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~iRis 359 (405)
T 2vi8_A 280 AYAKRVVDNAKRLASALQNEGFTLVSGGTDNHLLLVDLRPQQLTGKTAEKVLDEVGITVNKNTIPYDPESPFVTSGIRIG 359 (405)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHHTEECEEECCTTCSSCTTTCSEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHhCCCeEecCCCCceEEEEEccCCCCCHHHHHHHHHHcCceeccCcCccccCCCCCCCceEEe
Confidence 8999999999999999999876544432 45666666542 22222 2333321 23579999
Q ss_pred EcC----CCCHHHHHHHHHHHHHHHHH
Q 011842 427 VMP----NVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 427 ~~~----~~T~edid~~~~~l~~~~~~ 449 (476)
+.. .+|++|+++++++|+++.++
T Consensus 360 ~~~~~~~~~~~~~i~~~~~~l~~~~~~ 386 (405)
T 2vi8_A 360 TAAVTTRGFGLEEMDEIAAIIGLVLKN 386 (405)
T ss_dssp CHHHHHTTCCHHHHHHHHHHHHHHHTC
T ss_pred eeeeeecCCCHHHHHHHHHHHHHHHhc
Confidence 875 67899999999999987643
No 126
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.90 E-value=5e-23 Score=208.10 Aligned_cols=282 Identities=10% Similarity=0.013 Sum_probs=187.9
Q ss_pred HHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHH-HhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCC-CCCc
Q 011842 141 EVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVG-REVFPDGILYASRESHYSVFKAARMYRMECVKVDCL-ISGE 218 (476)
Q Consensus 141 e~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa-~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~-~~g~ 218 (476)
..++++.+++++|.+ .+++|+|||+|+..++.++ .. +++.|+++.++|.++..+++..|++++.++++ +++.
T Consensus 38 ~~~l~~~la~~~~~~----~~i~~~sgt~al~~~l~~l~~~--~gd~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 111 (373)
T 3frk_A 38 DKKFEQEFADYCNVN----YCIGCGNGLDALHLILKGYDIG--FGDEVIVPSNTFIATALAVSYTGAKPIFVEPDIRTYN 111 (373)
T ss_dssp HHHHHHHHHHHHTSS----EEEEESCHHHHHHHHHHHTTCC--TTCEEEEETTSCTHHHHHHHHHSCEEEEECEETTTTE
T ss_pred HHHHHHHHHHHhCCC----eEEEeCCHHHHHHHHHHHcCCC--CcCEEEECCCCcHHHHHHHHHcCCEEEEEeccccccC
Confidence 344555577777875 3899999999999998877 43 89999999999999999999999999999998 5689
Q ss_pred cCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCcccc
Q 011842 219 IDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKPI 298 (476)
Q Consensus 219 ~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~~ 298 (476)
+|+++|++++.+++ .+|++ ++++|.+.|+++|.++|++||+ ++|+|++|+.+........ . ...
T Consensus 112 ~d~~~l~~~l~~~~---~~v~~---~n~~G~~~~l~~i~~l~~~~~~-----~li~D~a~~~g~~~~~~~~---~--~~~ 175 (373)
T 3frk_A 112 IDPSLIESAITEKT---KAIIA---VHLYGQPADMDEIKRIAKKYNL-----KLIEDAAQAHGSLYKGMKV---G--SLG 175 (373)
T ss_dssp ECGGGTGGGCCTTE---EEEEE---ECCTTCCCCHHHHHHHHHHHTC-----EEEEECTTCTTCEETTEET---T--SSS
T ss_pred cCHHHHHHhcCCCC---eEEEE---ECCCcCcccHHHHHHHHHHcCC-----EEEEECCcccCCEECCEec---c--ccc
Confidence 99999999886643 35554 4578999999999999999999 9999999985443221211 1 115
Q ss_pred cEEEEc--CCCCCCCCCCceeEEeehh-hhhhhcCCccccCCCC--CcccCCCCChhHHHHHHHHHHhChhcHHHHHHHH
Q 011842 299 GSVSVS--GHKFVGCPMPCGVQITRME-HINVLSSNVEYLASRD--ATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKC 373 (476)
Q Consensus 299 Dsi~~s--~hK~l~~p~~~G~l~~~~~-~~~~l~~~~~yl~~~~--~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~ 373 (476)
|++++| .||+++++...|+++.+++ +.+.+.....+-.... ....+.......+. +++.....+++++..++.
T Consensus 176 d~~~~S~~~~K~l~~~g~gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~--aa~~~~~~~~~~~~~~~~ 253 (373)
T 3frk_A 176 DAAGFSFYPAKNLGSLGDGGAVVTNDKDLAEKIKALSNYGSEKKYHHIYKGFNSRLDELQ--AGFLRVKLKYLDKWNEER 253 (373)
T ss_dssp SEEEEECCTTSSSCCSSSCEEEEESCHHHHHHHHHHHBTTCSBTTBCCSCCCBCCCCHHH--HHHHHHHHHTHHHHHHHH
T ss_pred cEEEEeCcCCCccCccceeEEEEeCCHHHHHHHHHHHhcCcccCCccccccccCCCCHHH--HHHHHHHHHHHHHHHHHH
Confidence 777777 6699986355778887754 4333211000000000 00111111112232 233333346778888999
Q ss_pred HHHHHHHHHHHHhcCCeEeec-C-Ce--e--EEEEecCCcHHHh-----hceeec--------c----------------
Q 011842 374 LRNAHYLKDRLLDAGISAMLN-E-LS--S--TVVFERPQDEEFV-----RRWQLA--------C---------------- 418 (476)
Q Consensus 374 ~~~a~~l~~~L~~~g~~~~~~-~-~~--~--iv~f~~~~~~~~~-----~~~~l~--------~---------------- 418 (476)
.++++++.+.|++.+ ..+.. + .. + .+.+..++.+.+. +++.+. +
T Consensus 254 ~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (373)
T 3frk_A 254 RKIAQKYIAGINNPN-VIIPVEADYAKHVWYTFVIRSEKRDELQKYLNNNGIGTLIHYPIPIHLQQAYKDLGFKTGNFPI 332 (373)
T ss_dssp HHHHHHHHHHCCCTT-EECCCCCTTEECCCSSEEEEESSHHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGCCCTTSSHH
T ss_pred HHHHHHHHHHhccCc-eEeccCCCCCceeeEEEEEEeCCHHHHHHHHHHCCCCcccCcCCccccChHHHhcCCCCCCCHH
Confidence 999999999998887 33321 1 11 1 2223333322222 122111 0
Q ss_pred ----cCCEEEEEEcCCCCHHHHHHHHHHHHHHH
Q 011842 419 ----QGNIAHVVVMPNVTIDKLDDFLNELIENR 447 (476)
Q Consensus 419 ----~~~~lRv~~~~~~T~edid~~~~~l~~~~ 447 (476)
....+|+++++.+|++|||+++++|+++.
T Consensus 333 ~~~~~~~~lrl~~~~~~t~~di~~~~~~l~~~~ 365 (373)
T 3frk_A 333 AEKIANEILSIPIWYGMKNEEIEYVIDKINAWK 365 (373)
T ss_dssp HHHHHHHEEEECCCTTCCHHHHHHHHHHHHTCC
T ss_pred HHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHh
Confidence 01579999999999999999999998754
No 127
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=99.90 E-value=1.1e-21 Score=203.42 Aligned_cols=286 Identities=11% Similarity=0.012 Sum_probs=199.6
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCe--------
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRME-------- 207 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~-------- 207 (476)
+..++++++.+|+. .|++.+...+++|+|+++++..+ .+... |++.|++++++|.++...++..|++
T Consensus 112 g~~~lr~~ia~~~~--~g~~~~~~~i~~t~G~~~al~~~-~~l~~--~gd~Vl~~~p~~~~~~~~~~~~g~~g~~~~~~~ 186 (449)
T 3qgu_A 112 GQGALREAVASTFY--GHAGRAADEIFISDGSKCDIARI-QMMFG--SKPTVAVQDPSYPVYVDTSVMMGMTGDHNGTGF 186 (449)
T ss_dssp CCHHHHHHHHHHHH--TTTTCCGGGEEEESCHHHHHHHH-HHHHC--SSSCEEEEESCCTHHHHHHHHHTCSCCBCSSSB
T ss_pred CcHHHHHHHHHHHH--cCCCCCHHHEEEccCHHHHHHHH-HHHhC--CCCEEEEcCCCChhHHHHHHHcCCccccccccc
Confidence 45688888888876 56654455799999999998877 55544 8999999999999999999999998
Q ss_pred --EEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCccccc
Q 011842 208 --CVKVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLM 282 (476)
Q Consensus 208 --v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~ 282 (476)
++.+|++.++.++.+ +++. +++ .+|+++++.|++|.+.+ +++|+++|++||+ ++++|++|+++.
T Consensus 187 ~~~~~~~~~~~~~~~~~-~~~~--~~~---~~v~l~~p~NPtG~~~~~~~l~~l~~l~~~~~~-----~li~Dea~~~~~ 255 (449)
T 3qgu_A 187 DGIEYMVCNPDNHFFPD-LSKA--KRT---DIIFFCSPNNPTGAAATRAQLTELVNFARKNGS-----ILVYDAAYALYI 255 (449)
T ss_dssp TTEEEEECCGGGTTCCC-GGGC--CCC---SEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTC-----EEEEECTTGGGC
T ss_pred ceeEEEecccccCCcCC-hhHc--CCC---CEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCc-----EEEEEcchHhhh
Confidence 999999754333322 1111 233 37777889999999865 8889999999999 999999998765
Q ss_pred ccccccCCCCCC--cccccEEEEcCCCCCC-CCCCceeEEeehhhhhh--------hcCCccccCCCCCcccCCCCChhH
Q 011842 283 MPFVKKAPKVSF--KKPIGSVSVSGHKFVG-CPMPCGVQITRMEHINV--------LSSNVEYLASRDATIMGSRNGHAP 351 (476)
Q Consensus 283 ~~~~~~~~~~~~--~~~~Dsi~~s~hK~l~-~p~~~G~l~~~~~~~~~--------l~~~~~yl~~~~~~~~~sr~~~~~ 351 (476)
.......+...+ ....+++..+++|+++ .++++|++++++++++. +.....+ .. .....
T Consensus 256 ~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~--~~~~~ 325 (449)
T 3qgu_A 256 SNPDCPKTIYEIPGADEVAIETCSFSKYAGFTGVRLGWTVVPKALKYANGEPVHADWNRVMTT--------CF--NGASN 325 (449)
T ss_dssp CCTTSCSSGGGSTTGGGTEEEEEECSGGGTCTTCCCEEEECCTTCBCTTSCBHHHHHHHHHHH--------SC--CCCCH
T ss_pred cCCCCCCCHhhccCCCCcEEEEecchhhcCCccceeEEEecCHHHHhhhhhhHHHHHHHHhhc--------cc--CCCCH
Confidence 532111111112 1236788899999997 78999999998876431 1000000 00 01224
Q ss_pred HHHHHHHHHhCh---hcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecCC--cHHH----hh--ceeec---
Q 011842 352 IFLWYTLNRKGY---KGFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERPQ--DEEF----VR--RWQLA--- 417 (476)
Q Consensus 352 l~~~~~l~~~g~---~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~--~~~~----~~--~~~l~--- 417 (476)
+.+.++...+.. +.+++..++..+++++|.+.|++.|+....+..++++.+..+. ..++ .+ ++.+.
T Consensus 326 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gI~v~pg~ 405 (449)
T 3qgu_A 326 IVQAGGLACLQPEGLKEMNAMIKFYKENAQILKTTFTEMGFSVYGGDDAPYIWVGFPGKPSWDVFAEILERCNIVTTPGS 405 (449)
T ss_dssp HHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEESSSSSEEEEECTTSCHHHHHHHHHHHHCEECEEGG
T ss_pred HHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCeeEEEEECCCCCHHHHHHHHHHHCCEEEecch
Confidence 555555555533 4467788889999999999999998766555556777777652 2222 22 34332
Q ss_pred ----ccCCEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Q 011842 418 ----CQGNIAHVVVMPNVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 418 ----~~~~~lRv~~~~~~T~edid~~~~~l~~~~~~ 449 (476)
...+++|+++. .|+++|+.+++.|+++.++
T Consensus 406 ~f~~~~~~~iRis~~--~~~e~i~~~l~~l~~~~~~ 439 (449)
T 3qgu_A 406 GYGPAGEGFVRASAF--GSRENILEAVRRFKEAYGK 439 (449)
T ss_dssp GGCGGGTTEEEEECC--SCHHHHHHHHHHHHHHHC-
T ss_pred HhCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHh
Confidence 12478999853 4999999999999887654
No 128
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.90 E-value=5.1e-22 Score=202.96 Aligned_cols=271 Identities=14% Similarity=0.079 Sum_probs=197.5
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHH----HHcCCeEEEEeCC
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAA----RMYRMECVKVDCL 214 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~----~~~G~~v~~v~~~ 214 (476)
....++++.+++++|.+ ..+++++|++|+..++.++.. +++.|+++.+.|.++...+ +..|++++.++.+
T Consensus 65 ~~~~~l~~~la~~~g~~----~~i~~~sG~~a~~~~l~~~~~--~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 138 (398)
T 1gc0_A 65 PTLNLLEARMASLEGGE----AGLALASGMGAITSTLWTLLR--PGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVDMA 138 (398)
T ss_dssp HHHHHHHHHHHHHHTCS----EEEEESSHHHHHHHHHHHHCC--TTCEEEEESSCCSHHHHHHHHTGGGGTCEEEEECTT
T ss_pred hHHHHHHHHHHHHhCCC----cEEEECCHHHHHHHHHHHHhc--CCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCC
Confidence 55667778888889876 267777889999999988754 8899999999999987765 6679999999875
Q ss_pred CCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCC
Q 011842 215 ISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSF 294 (476)
Q Consensus 215 ~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~ 294 (476)
|+++|+++|++++ .+|+++++++++|.+.|+++|+++|++||+ ++|+|++|+.+.... ..
T Consensus 139 -----d~~~l~~~i~~~~---~~v~~~~~~nptG~~~~l~~i~~l~~~~~~-----~li~D~~~~~~~~~~-------~~ 198 (398)
T 1gc0_A 139 -----DLQALEAAMTPAT---RVIYFESPANPNMHMADIAGVAKIARKHGA-----TVVVDNTYCTPYLQR-------PL 198 (398)
T ss_dssp -----CHHHHHHHCCTTE---EEEEEESSCTTTCCCCCHHHHHHHHGGGTC-----EEEEECTTTHHHHCC-------GG
T ss_pred -----CHHHHHHhcCCCC---eEEEEECCCCCCcccccHHHHHHHHHHcCC-----EEEEECCCcccccCC-------ch
Confidence 8999999987544 488889999999999999999999999999 999999998655421 11
Q ss_pred cccccEEEEcCCCCCCCCCC--ceeEEeehhhhh-hhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHH
Q 011842 295 KKPIGSVSVSGHKFVGCPMP--CGVQITRMEHIN-VLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQ 371 (476)
Q Consensus 295 ~~~~Dsi~~s~hK~l~~p~~--~G~l~~~~~~~~-~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~ 371 (476)
...+|+++.|+||+++.|.. .|+++++++.+. .+.....++ ..++ ...+.+|++++.+ +.+..+++
T Consensus 199 ~~~~d~~~~S~sK~~~~~~~~~~G~l~~~~~~~~~~~~~~~~~~------~~~~---~~~~~~~~~~~~l--~~~~~~~~ 267 (398)
T 1gc0_A 199 ELGADLVVHSATKYLSGHGDITAGIVVGSQALVDRIRLQGLKDM------TGAV---LSPHDAALLMRGI--KTLNLRMD 267 (398)
T ss_dssp GGTCSEEEEETTTTTTCSSSCCCEEEEECHHHHHHHHHTHHHHH------TCCC---CCHHHHHHHHHHH--TTHHHHHH
T ss_pred hhCceEEEECCccccCCCCCCeEEEEEEChHHHHHHHHHHhhcc------CCCC---CCHHHHHHHHhcc--chHHHHHH
Confidence 12489999999999997654 599999887554 332211110 0111 1245566665554 45677888
Q ss_pred HHHHHHHHHHHHHHhcCCeE-e-ec----------------CCeeEEEEecCCcH----HHhhceee---c---------
Q 011842 372 KCLRNAHYLKDRLLDAGISA-M-LN----------------ELSSTVVFERPQDE----EFVRRWQL---A--------- 417 (476)
Q Consensus 372 ~~~~~a~~l~~~L~~~g~~~-~-~~----------------~~~~iv~f~~~~~~----~~~~~~~l---~--------- 417 (476)
+..++++++.+.|++.+... + .+ ...+++.|..++.. .+.+++.+ .
T Consensus 268 ~~~~~~~~l~~~L~~~~~v~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~i~~~~~s~G~~~sl 347 (398)
T 1gc0_A 268 RHCANAQVLAEFLARQPQVELIHYPGLASFPQYTLARQQMSQPGGMIAFELKGGIGAGRRFMNALQLFSRAVSLGDAESL 347 (398)
T ss_dssp HHHHHHHHHHHHHHTCTTEEEEEEC----------------CCTTEEEEEETTHHHHHHHHHHHCSSSEECSCCSCSSCE
T ss_pred HHHHHHHHHHHHHhcCCCeeEEECCCCCCCcCHHHHHhhCCCCceEEEEEECCCHHHHHHHHHhCCCceeccCCCCccee
Confidence 88889999999998865321 1 11 13577888775431 22222211 1
Q ss_pred ---c------------------cCCEEEEEEcCCCCHHHHHHHHHHHHHH
Q 011842 418 ---C------------------QGNIAHVVVMPNVTIDKLDDFLNELIEN 446 (476)
Q Consensus 418 ---~------------------~~~~lRv~~~~~~T~edid~~~~~l~~~ 446 (476)
+ ..+.+|+++...+++++|+.|.++|+++
T Consensus 348 ~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~~~~~~~i~~l~~al~~~ 397 (398)
T 1gc0_A 348 AQHPASMTHSSYTPEERAHYGISEGLVRLSVGLEDIDDLLADVQQALKAS 397 (398)
T ss_dssp EECGGGTTTSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred eecccccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHhc
Confidence 1 0368999999999999999999999764
No 129
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.90 E-value=4e-22 Score=202.79 Aligned_cols=283 Identities=12% Similarity=0.049 Sum_probs=190.4
Q ss_pred HHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHH-HhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCC-CCCc
Q 011842 141 EVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVG-REVFPDGILYASRESHYSVFKAARMYRMECVKVDCL-ISGE 218 (476)
Q Consensus 141 e~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa-~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~-~~g~ 218 (476)
..++++.+++++|.+ .+++|+|||+|+..++.++ .. +++.|+++.++|.++..+++..|++++.++++ +++.
T Consensus 58 ~~~l~~~la~~~~~~----~~i~~~~gt~al~~~l~~~~~~--~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 131 (391)
T 3dr4_A 58 IVEFEKAFADYCGVK----HAIACNNGTTALHLALVAMGIG--PGDEVIVPSLTYIASANSVTYCGATPVLVDNDPRTFN 131 (391)
T ss_dssp HHHHHHHHHHHHTCS----EEEEESSHHHHHHHHHHHHTCC--TTCEEEEESSSCTHHHHHHHHTTCEEEEECBCTTTCS
T ss_pred HHHHHHHHHHHhCCC----cEEEeCCHHHHHHHHHHHcCCC--CcCEEEECCCchHHHHHHHHHCCCEEEEEecCccccC
Confidence 334555567777776 3899999999999998887 44 89999999999999999999999999999998 5688
Q ss_pred cCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCcccc
Q 011842 219 IDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKPI 298 (476)
Q Consensus 219 ~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~~ 298 (476)
+|+++|++++.+++ .+|++ ++++|.+.|+++|.++|++||+ ++++|++|+.+..........+ ..+
T Consensus 132 ~d~~~l~~~~~~~~---~~v~~---~n~tG~~~~~~~i~~l~~~~~~-----~li~D~a~~~g~~~~~~~~~~~---~di 197 (391)
T 3dr4_A 132 LDAAKLEALITPRT---KAIMP---VHLYGQICDMDPILEVARRHNL-----LVIEDAAEAVGATYRGKKSGSL---GDC 197 (391)
T ss_dssp BCGGGSGGGCCTTE---EEECC---BCGGGCCCCHHHHHHHHHHTTC-----EEEEECTTCTTCEETTEETTSS---SSE
T ss_pred cCHHHHHHhcCCCc---eEEEE---ECCCCChhhHHHHHHHHHHcCC-----EEEEECcccccceECCeeeccc---CCE
Confidence 99999999886544 35553 4688999999999999999999 9999999985443322211111 125
Q ss_pred cEEEEcCCCCCCCCCCceeEEeehh-hhhhhcCCccccCC--C--CCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHH
Q 011842 299 GSVSVSGHKFVGCPMPCGVQITRME-HINVLSSNVEYLAS--R--DATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKC 373 (476)
Q Consensus 299 Dsi~~s~hK~l~~p~~~G~l~~~~~-~~~~l~~~~~yl~~--~--~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~ 373 (476)
++++++.||++++ ...|+++++++ +.+.+.....+-.. . .....+....... +.+++.....+++++..++.
T Consensus 198 ~~~S~s~~K~l~~-g~gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~--l~aa~~~~~~~~~~~~~~~~ 274 (391)
T 3dr4_A 198 ATFSFFGNAIITT-GEGGMITTNDDDLAAKMRLLRGQGMDPNRRYWFPIVGFNYRMTN--IQAAIGLAQLERVDEHLAAR 274 (391)
T ss_dssp EEEECBTTSSSCC-BSCEEEEESCHHHHHHHHHHHBTTCCTTSTTCCSSCCCBCBCCH--HHHHHHHHHHHTHHHHHHHH
T ss_pred EEEECCCCCcCCc-CCeEEEEECCHHHHHHHHHHHhcCCCCCCcccccccccccCCCH--HHHHHHHHHHHHHHHHHHHH
Confidence 6666778899986 55778877765 43332110000000 0 0001111111122 23333333346778889999
Q ss_pred HHHHHHHHHHHHhcCCeEeec--CC---e--eEEEEecCC-----cHHHhh-----ceeecc------------------
Q 011842 374 LRNAHYLKDRLLDAGISAMLN--EL---S--STVVFERPQ-----DEEFVR-----RWQLAC------------------ 418 (476)
Q Consensus 374 ~~~a~~l~~~L~~~g~~~~~~--~~---~--~iv~f~~~~-----~~~~~~-----~~~l~~------------------ 418 (476)
.++++++.+.|++.++....+ +. . .++.+..+. ..++.+ ++.+..
T Consensus 275 ~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~L~~~GI~v~~~~~p~~~~~~~~~~~~~~ 354 (391)
T 3dr4_A 275 ERVVGWYEQKLARLGNRVTKPHVALTGRHVFWMYTVRLGEGLSTTRDQVIKDLDALGIESRPVFHPMHIMPPYAHLATDD 354 (391)
T ss_dssp HHHHHHHHHHHGGGTTSEECCCCCTTSCCCCSSEEEEECSSCSSCHHHHHHHHHHTTCCCEECCCCGGGSGGGGGGCCTT
T ss_pred HHHHHHHHHHhhcCCccccCcCCCCCCcceeEEEEEEECCccchhHHHHHHHHHHCCCceeecCCccccChhhhhcCcCC
Confidence 999999999999987655433 11 1 233444432 223221 222110
Q ss_pred -------cCCEEEEEEcCCCCHHHHHHHHHHHHHH
Q 011842 419 -------QGNIAHVVVMPNVTIDKLDDFLNELIEN 446 (476)
Q Consensus 419 -------~~~~lRv~~~~~~T~edid~~~~~l~~~ 446 (476)
....+|+++++.+|+||||+++++|+++
T Consensus 355 ~~~~~~~~~~~lrl~~~~~~t~edi~~~~~~l~~~ 389 (391)
T 3dr4_A 355 LKIAEACGVDGLNLPTHAGLTEADIDRVIAALDQV 389 (391)
T ss_dssp CHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTT
T ss_pred ChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHH
Confidence 1257899999999999999999999764
No 130
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.90 E-value=8.1e-22 Score=204.20 Aligned_cols=270 Identities=16% Similarity=0.146 Sum_probs=195.9
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHH----HHHcCCeEEEEeCC
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKA----ARMYRMECVKVDCL 214 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~----~~~~G~~v~~v~~~ 214 (476)
....++++++++++|.+. .+++++|++|+..++.+... +|+.|+++.+.|.++... ++..|++++.++.+
T Consensus 114 ~~~~~l~~~lA~l~g~~~----~v~~~sG~~Ai~~al~~l~~--~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~ 187 (445)
T 1qgn_A 114 PTTVVLEEKISALEGAES----TLLMASGMCASTVMLLALVP--AGGHIVTTTDCYRKTRIFIETILPKMGITATVIDPA 187 (445)
T ss_dssp HHHHHHHHHHHHHHTCSE----EEEESCHHHHHHHHHHHHSC--SSCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECSS
T ss_pred hHHHHHHHHHHHHhCCCc----EEEeCCHHHHHHHHHHHHhC--CCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCC
Confidence 556677788899998852 56677778999999887654 899999999999887664 45679999999875
Q ss_pred CCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCC
Q 011842 215 ISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSF 294 (476)
Q Consensus 215 ~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~ 294 (476)
|+++|+++|++++ +.+|++++++|++|.+.|+++|+++|++||+ ++|+|++|+.++.. .+ +
T Consensus 188 -----d~~~l~~ai~~~t--v~lV~le~p~NptG~v~dl~~I~~la~~~g~-----~livD~a~~~~~~~----~~-~-- 248 (445)
T 1qgn_A 188 -----DVGALELALNQKK--VNLFFTESPTNPFLRCVDIELVSKLCHEKGA-----LVCIDGTFATPLNQ----KA-L-- 248 (445)
T ss_dssp -----CHHHHHHHHHHSC--EEEEEEESSCTTTCCCCCHHHHHHHHHHTTC-----EEEEECTTTCTTTC----CT-T--
T ss_pred -----CHHHHHHHhccCC--CCEEEEeCCCCCCCcccCHHHHHHHHHHcCC-----EEEEECCCcccccC----Cc-c--
Confidence 8999999998776 1388889999999999999999999999999 99999999755432 11 1
Q ss_pred cccccEEEEcCCCCCCCCC--CceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHHH
Q 011842 295 KKPIGSVSVSGHKFVGCPM--PCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQK 372 (476)
Q Consensus 295 ~~~~Dsi~~s~hK~l~~p~--~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~ 372 (476)
...+|+++.|+||+++++. .+|+++.++++++.+...... .++. ..++..|.+++. .+.+..++++
T Consensus 249 ~~g~Div~~S~sK~~gg~gd~~~G~l~~~~~l~~~l~~~~~~--------~g~~--~~~~~a~~~~~~--l~~l~~r~~~ 316 (445)
T 1qgn_A 249 ALGADLVLHSATKFLGGHNDVLAGCISGPLKLVSEIRNLHHI--------LGGA--LNPNAAYLIIRG--MKTLHLRVQQ 316 (445)
T ss_dssp TTTCSEEEECTTTTTTCSSSCCCEEEEECHHHHHHHHHHHHH--------HCCC--CCHHHHHHHHHH--GGGHHHHHHH
T ss_pred ccCCEEEEECCcccccccccceEEEEEECHHHHHHHHHHHHH--------hCCC--CCHHHHHHHHHh--HHHHHHHHHH
Confidence 1248999999999998432 399999998876655321111 1111 123445555543 3556777888
Q ss_pred HHHHHHHHHHHHHhcCCe-EeecC-----------------CeeEEEEecCCc----HHHhhcee---ec------c---
Q 011842 373 CLRNAHYLKDRLLDAGIS-AMLNE-----------------LSSTVVFERPQD----EEFVRRWQ---LA------C--- 418 (476)
Q Consensus 373 ~~~~a~~l~~~L~~~g~~-~~~~~-----------------~~~iv~f~~~~~----~~~~~~~~---l~------~--- 418 (476)
..++++++.+.|++.+.. .+..| ..+++.|..++. ..+.+.+. +. |
T Consensus 317 ~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~g~ivsf~l~~~~~~~~~~l~~l~~~~i~~s~G~~~sl~ 396 (445)
T 1qgn_A 317 QNSTALRMAEILEAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVDGDLLTTAKFVDALKIPYIAPSFGGCESIV 396 (445)
T ss_dssp HHHHHHHHHHHHHTCTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEESSCHHHHHHHHHHCSSSEECSCCCSSSCEE
T ss_pred HHHHHHHHHHHHhcCCCceEEECCCCCCCchHHHHHHhccCCCcEEEEEECCCHHHHHHHHHhCCCceEeccCCCCceee
Confidence 888899999999987643 23222 357888887643 22333321 10 0
Q ss_pred ---------------------cCCEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Q 011842 419 ---------------------QGNIAHVVVMPNVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 419 ---------------------~~~~lRv~~~~~~T~edid~~~~~l~~~~~~ 449 (476)
..+.+|+++. .||+|+++++|+++.+.
T Consensus 397 ~~p~~~~h~~~~~~~~~~~g~~~~~iRlSvG----~Edid~li~~L~~al~~ 444 (445)
T 1qgn_A 397 DQPAIMSYWDLSQSDRAKYGIMDNLVRFSFG----VEDFDDLKADILQALDS 444 (445)
T ss_dssp ECHHHHHSTTSCHHHHHTTTCCSSEEEEECC----SSCHHHHHHHHHHHHHH
T ss_pred ecccccccccCCHHHHHhcCCCCCeEEEEec----cCCHHHHHHHHHHHHhh
Confidence 1268999887 57899999999988753
No 131
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=99.90 E-value=3.9e-22 Score=205.48 Aligned_cols=291 Identities=8% Similarity=-0.088 Sum_probs=195.6
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHH--HHHHHHHhhCC----------CcEEEecCCCchHHHHHHHH
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNL--HGILVGREVFP----------DGILYASRESHYSVFKAARM 203 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~--~al~aa~~~~p----------~~~Vl~s~~~H~S~~~~~~~ 203 (476)
+..++++++.++ ++++++ .+++|+|++++++ .++.+.....| ++.|+++.++|.++...++.
T Consensus 79 g~~~lr~~ia~~----~~~~~~--~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~~gd~V~v~~p~y~~~~~~~~~ 152 (427)
T 3ppl_A 79 GIVDIRQIWADL----LGVPVE--QVLAGDASSLNIMFDVISWSYIFGNNDSVQPWSKEETVKWICPVPGYDRHFSITER 152 (427)
T ss_dssp CCHHHHHHHHHH----HTSCGG--GEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHH
T ss_pred CcHHHHHHHHHH----hCCCcc--eEEEeCCcHHHHHHHHHHHHHhccCCcccccccCCCCCEEEEcCCCcHHHHHHHHH
Confidence 456666665554 477643 5999999999994 56666554224 89999999999999999999
Q ss_pred cCCeEEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEe-eCCCccccccCHH---HHHHHH-HHhCCCCCceEEEEecCc
Q 011842 204 YRMECVKVDCLISGEIDCADFKAKLLQNKDKPAIINVN-IGTTVKGAVDDLD---LVIQTL-EESGFTQDRFYIHCDGAL 278 (476)
Q Consensus 204 ~G~~v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t-~gtt~tG~id~l~---~I~~ia-~~~g~~~~~~~lhvD~a~ 278 (476)
.|++++.+|++++| +|+++|++++.. .++.+|+++ +++|+||.+.|.+ +|+++| ++||+ ++|+|++|
T Consensus 153 ~g~~~~~v~~~~~g-~d~~~l~~~l~~--~~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~-----~ii~De~y 224 (427)
T 3ppl_A 153 FGFEMISVPMNEDG-PDMDAVEELVKN--PQVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDF-----RVVWDNAY 224 (427)
T ss_dssp TTCEEEEEEEETTE-ECHHHHHHHTTS--TTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTC-----EEEEECTT
T ss_pred cCCEEEEeCCCCCC-CCHHHHHHHHhc--CCCeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCC-----EEEEECCC
Confidence 99999999998766 999999999942 223466555 7799999998776 888888 99999 99999999
Q ss_pred ccccccccccC--CCCCC-----cccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhH
Q 011842 279 FGLMMPFVKKA--PKVSF-----KKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAP 351 (476)
Q Consensus 279 ~g~~~~~~~~~--~~~~~-----~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~ 351 (476)
+.+.+...... +.+.. ....+++..|++|+++.++++|+++.++++++.+.....+.. .+ ...
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~G~r~G~~~~~~~l~~~~~~~~~~~~-------~~---~~~ 294 (427)
T 3ppl_A 225 AVHTLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSKITLAGAGVSFFLTSAENRKWYTGHAGIRG-------IG---PNK 294 (427)
T ss_dssp TTCBSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTTTSCTTSSCEEEECCHHHHHHHHHHHHHHC-------SC---CCH
T ss_pred cccccCCCCCCccchhhhhhccCCCCcEEEEechhhccCcCccEEEEEcCHHHHHHHHHHhhccc-------CC---CCH
Confidence 87544321110 11111 112567888999998889999999999887665532222110 01 123
Q ss_pred HHHHHHHHHhCh-----hcHHHHHHHHHHHHHHHHHHHHh----cCCeEe-ecCCeeEEEEecCC--cHHHh-----hce
Q 011842 352 IFLWYTLNRKGY-----KGFQKEVQKCLRNAHYLKDRLLD----AGISAM-LNELSSTVVFERPQ--DEEFV-----RRW 414 (476)
Q Consensus 352 l~~~~~l~~~g~-----~g~~~~~~~~~~~a~~l~~~L~~----~g~~~~-~~~~~~iv~f~~~~--~~~~~-----~~~ 414 (476)
+.++++...+.. ..+++..+...++++++.+.|.+ .+...+ .+...+++.+..+. ...+. ++.
T Consensus 295 ~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~l~~~gv 374 (427)
T 3ppl_A 295 VNQLAHARYFGDAEGVRAVMRKHAASLAPKFNKVLEILDSRLAEYGVAQWTVPAGGYFISLDVVPGTASRVAELAKEAGI 374 (427)
T ss_dssp HHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCCEECCCSBSSCEEEECSTTCHHHHHHHHHHTTE
T ss_pred HHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEeCCCccEEEEEECCcchHHHHHHHHHHCCC
Confidence 445555444433 22444455555666666666654 333333 34456667777653 23332 223
Q ss_pred eecc-----------cCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 011842 415 QLAC-----------QGNIAHVVVMPNVTIDKLDDFLNELIENRSTWY 451 (476)
Q Consensus 415 ~l~~-----------~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~ 451 (476)
.+.. ..+.+|+++... |+++|+.+++.|.++.++..
T Consensus 375 ~v~~~g~~~~~~~~~~~~~~Ris~~~~-~~~~i~~~~~~l~~~l~~~~ 421 (427)
T 3ppl_A 375 ALTGAGSSYPLRQDPENKNLRLAPSLP-PVEELEVAMDGVATCVLLAA 421 (427)
T ss_dssp ECCCTTTTSGGGCCTTSCEEEECCSSS-CHHHHHHHHHHHHHHHHHHH
T ss_pred EEecCcCcCCCCCCCCCCeEEEECCCC-CHHHHHHHHHHHHHHHHHHH
Confidence 3321 347899988544 99999999999999887654
No 132
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.90 E-value=4.7e-22 Score=202.01 Aligned_cols=284 Identities=14% Similarity=0.076 Sum_probs=192.8
Q ss_pred HHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHH-HhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCC-Ccc
Q 011842 142 VGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVG-REVFPDGILYASRESHYSVFKAARMYRMECVKVDCLIS-GEI 219 (476)
Q Consensus 142 ~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa-~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~-g~~ 219 (476)
.++++.+++++|.+ .+++|+|||+|+..++.++ .. |++.|+++.++|.++..+++..|++++.++.+++ +.+
T Consensus 42 ~~l~~~la~~~~~~----~~~~~~~gt~al~~~~~~~~~~--~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~ 115 (393)
T 1mdo_A 42 QELEAAFCRLTGNQ----YAVAVSSATAGMHIALMALGIG--EGDEVITPSMTWVSTLNMIVLLGANPVMVDVDRDTLMV 115 (393)
T ss_dssp HHHHHHHHHHHCCS----EEEEESCHHHHHHHHHHHTTCC--TTCEEEEESSSCHHHHHHHHHTTCEEEEECBCTTTCCB
T ss_pred HHHHHHHHHHhCCC----cEEEecChHHHHHHHHHHcCCC--CCCEEEeCCCccHhHHHHHHHCCCEEEEEeccCCcCCC
Confidence 34455566777765 3899999999999998887 43 8999999999999999999999999999999864 689
Q ss_pred CHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCccccc
Q 011842 220 DCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKPIG 299 (476)
Q Consensus 220 D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~~D 299 (476)
|+++|++++++++ .+|++++ ++|.+.|+++|.++|++||+ ++++|++|+.+....... +. . .|
T Consensus 116 d~~~l~~~l~~~~---~~v~~~~---~~G~~~~~~~i~~l~~~~~~-----~li~D~a~~~g~~~~~~~---~~--~-~d 178 (393)
T 1mdo_A 116 TPEHIEAAITPQT---KAIIPVH---YAGAPADLDAIYALGERYGI-----PVIEDAAHATGTSYKGRH---IG--A-RG 178 (393)
T ss_dssp CHHHHHHHCCTTE---EEECCBC---GGGCCCCHHHHHHHHHHHTC-----CBCEECTTCTTCEETTEE---TT--S-SS
T ss_pred CHHHHHHhcCCCc---eEEEEeC---CCCCcCCHHHHHHHHHHcCC-----eEEEECccccCCeECCee---cC--C-CC
Confidence 9999999997543 3665543 68999999999999999999 999999998543322211 11 1 68
Q ss_pred EEEEcCC--CCCCCCCCceeEEee-hhhhhhhcCCccc----------cCCCCCcc----cCCCCChhHHHHHHHHHHhC
Q 011842 300 SVSVSGH--KFVGCPMPCGVQITR-MEHINVLSSNVEY----------LASRDATI----MGSRNGHAPIFLWYTLNRKG 362 (476)
Q Consensus 300 si~~s~h--K~l~~p~~~G~l~~~-~~~~~~l~~~~~y----------l~~~~~~~----~~sr~~~~~l~~~~~l~~~g 362 (476)
+++.|+| |++++ .++|+++.+ +++.+.+.....+ .......+ .|.......+....++..
T Consensus 179 ~~~~S~~k~K~l~~-~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~-- 255 (393)
T 1mdo_A 179 TAIFSFHAIKNITC-AEGGIVVTDNPQFADKLRSLKFHGLGVDAWDRQSGGRAPQAEVLAPGYKYNLPDLNAAIALAQ-- 255 (393)
T ss_dssp EEEEECCTTSSSCS-SSCEEEEESCHHHHHHHHHHTBTTEECC-----------CCEESSCCCBCCCCHHHHHHHHHH--
T ss_pred eEEEeCCCCCcccc-ccceEEEeCCHHHHHHHHHHHhcCCcccchhhhcccccccccccccCccCCCCHHHHHHHHHH--
Confidence 9999999 99975 478888886 4555443211000 00000111 111011223433333332
Q ss_pred hhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecC------CeeEEEEecC------CcHHHhh-----ceeec----c---
Q 011842 363 YKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNE------LSSTVVFERP------QDEEFVR-----RWQLA----C--- 418 (476)
Q Consensus 363 ~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~------~~~iv~f~~~------~~~~~~~-----~~~l~----~--- 418 (476)
.+++++..++..++++++.+.|++.++.....+ ...++.+..+ ...++.+ ++.+. +
T Consensus 256 l~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~~~ 335 (393)
T 1mdo_A 256 LQKLDALNARRAAIAAQYHQAMADLPFQPLSLPSWEHIHAWHLFIIRVDEARCGITRDALMASLKTKGIGTGLHFRAAHT 335 (393)
T ss_dssp HHTHHHHHHHHHHHHHHHHHHHHTSSCEECCCCSSCEECCCSCEEEECCHHHHSSCHHHHHHHHHHTTBCCBCCCCCGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCCCceeEEEEEEecccccccCHHHHHHHHHhCCCCcccccCcccc
Confidence 355778888888999999999999884332222 2235666655 2222321 22221 1
Q ss_pred -------------------cCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 011842 419 -------------------QGNIAHVVVMPNVTIDKLDDFLNELIENRSTWY 451 (476)
Q Consensus 419 -------------------~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~ 451 (476)
....+|+++++.+|++||++++++|+++.+...
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~~~~~~ 387 (393)
T 1mdo_A 336 QKYYRERFPTLTLPDTEWNSERICSLPLFPDMTESDFDRVITALHQIAGQGS 387 (393)
T ss_dssp SHHHHHHSTTCCCHHHHHHHTTEEEECCCTTCCHHHHHHHHHHHHHHHC---
T ss_pred ChhhhccCCccCChhHHHHHhCEEEecCCCCCCHHHHHHHHHHHHHHHhcCC
Confidence 123799999999999999999999998865543
No 133
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.90 E-value=1.3e-22 Score=202.57 Aligned_cols=283 Identities=16% Similarity=0.153 Sum_probs=184.6
Q ss_pred HHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHH---HHHHcCCeEEEEeCCCCCc
Q 011842 142 VGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFK---AARMYRMECVKVDCLISGE 218 (476)
Q Consensus 142 ~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~---~~~~~G~~v~~v~~~~~g~ 218 (476)
.++++++++++|.+. .++|+|||+|+..++.+... ||+.|++++++|.+... .++..|++++.+ .++++.
T Consensus 41 ~~l~~~la~~~g~~~----~~~~~~gt~a~~~~~~~~~~--~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~~~~ 113 (347)
T 1jg8_A 41 NELERLAAETFGKEA----ALFVPSGTMGNQVSIMAHTQ--RGDEVILEADSHIFWYEVGAMAVLSGVMPHPV-PGKNGA 113 (347)
T ss_dssp HHHHHHHHHHHTCSE----EEEESCHHHHHHHHHHHHCC--TTCEEEEETTCHHHHSSTTHHHHHTCCEEEEE-CEETTE
T ss_pred HHHHHHHHHHhCCce----EEEecCcHHHHHHHHHHhcC--CCCEEEEcCcchhhhccccchhhccCeEEEEe-cCCCCc
Confidence 345566778888752 78999999999988877655 89999999999987543 567789999888 556788
Q ss_pred cCHHHHHHHHHcC---CCCcEEEEEeeCCCcc-ccccC---HHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCC
Q 011842 219 IDCADFKAKLLQN---KDKPAIINVNIGTTVK-GAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPK 291 (476)
Q Consensus 219 ~D~~~Le~~l~~~---~~~p~~vv~t~gtt~t-G~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~ 291 (476)
+|+++|+++|++. ..++.+|++++++|++ |.+.| +++|+++|++||+ ++++|++|..+..... ....
T Consensus 114 ~d~~~l~~~i~~~~~~~~~~~~v~~~~~~npt~G~~~~~~~l~~i~~~a~~~~~-----~li~D~a~~~~~~~~~-~~~~ 187 (347)
T 1jg8_A 114 MDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLENIKEICTIAKEHGI-----NVHIDGARIFNASIAS-GVPV 187 (347)
T ss_dssp ECHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTC-----EEEEEETTHHHHHHHH-CCCH
T ss_pred cCHHHHHHHhccccccccCceEEEEeccccccCCccCcHHHHHHHHHHHHHCCC-----EEEeehhhhhcchhhc-CCCh
Confidence 9999999999752 1235688888999999 99855 5789999999999 9999999742111000 0000
Q ss_pred CCCcccccEEEEcCCCCCCCCCCce-eEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHH
Q 011842 292 VSFKKPIGSVSVSGHKFVGCPMPCG-VQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEV 370 (476)
Q Consensus 292 ~~~~~~~Dsi~~s~hK~l~~p~~~G-~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~ 370 (476)
......+|++++++||+++.| .| +++.++++++.+.....+.... .............+++.. .+ .+
T Consensus 188 ~~~~~~~d~~~~s~sK~l~~~--~G~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~-~~----~~ 255 (347)
T 1jg8_A 188 KEYAGYADSVMFCLSKGLCAP--VGSVVVGDRDFIERARKARKMLGGG-----MRQAGVLAAAGIIALTKM-VD----RL 255 (347)
T ss_dssp HHHHHTCSEEEEESSSTTCCS--SCEEEEECHHHHHHHHHHHHHHTCC-----CSSTHHHHHHHHHHHHHS-ST----TH
T ss_pred HHhcccccEEEEecccccCCC--ceEEEEcCHHHHHHHHHHHHHcCCc-----hhHHHHHHHHHHHHHHHH-HH----HH
Confidence 111123788888999999876 45 4555665554432211121110 011111111111223321 12 23
Q ss_pred HHHHHHHHHHHHHHHhcCCeEe-ecCCeeEEEEecCC----cHHHhh-----ceeec-ccCCEEEEEEcCCCCHHHHHHH
Q 011842 371 QKCLRNAHYLKDRLLDAGISAM-LNELSSTVVFERPQ----DEEFVR-----RWQLA-CQGNIAHVVVMPNVTIDKLDDF 439 (476)
Q Consensus 371 ~~~~~~a~~l~~~L~~~g~~~~-~~~~~~iv~f~~~~----~~~~~~-----~~~l~-~~~~~lRv~~~~~~T~edid~~ 439 (476)
++..++++++.+.|++.|+... .++.++++.+..+. ..++.+ +..+. ...+.+|++++..+|++|++++
T Consensus 256 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~iRl~~~~~~~~e~i~~~ 335 (347)
T 1jg8_A 256 KEDHENARFLALKLKEIGYSVNPEDVKTNMVILRTDNLKVNAHGFIEALRNSGVLANAVSDTEIRLVTHKDVSRNDIEEA 335 (347)
T ss_dssp HHHHHHHHHHHHHHHHHTCBCCGGGCCSSEEEEECTTSSSCHHHHHHHHHHHTEECEEEETTEEEEECCTTSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCceeccCCCcceEEEEEcccccCCHHHHHHHHHHCCCEEecCCCCeEEEEeCCCCCHHHHHHH
Confidence 3344677888888888765432 24456777777652 233332 22232 2346899999999999999999
Q ss_pred HHHHHHHHHH
Q 011842 440 LNELIENRST 449 (476)
Q Consensus 440 ~~~l~~~~~~ 449 (476)
+++|+++.++
T Consensus 336 ~~~l~~~l~~ 345 (347)
T 1jg8_A 336 LNIFEKLFRK 345 (347)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999988764
No 134
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=99.90 E-value=1.8e-21 Score=204.77 Aligned_cols=299 Identities=10% Similarity=-0.034 Sum_probs=207.9
Q ss_pred hhhHHHHHHHHHHHHHHcC-CCCCcccEEEcCCchhHHHHHHHHHHhhCCC----cEEEecCCCchHHHHHHHHcCCeEE
Q 011842 135 VHSRQFEVGVLDWFARLWE-LENNEYWGYITNCGTEGNLHGILVGREVFPD----GILYASRESHYSVFKAARMYRMECV 209 (476)
Q Consensus 135 ~~~~~le~~~~~~la~l~g-~~~~~~~g~~t~ggt~An~~al~aa~~~~p~----~~Vl~s~~~H~S~~~~~~~~G~~v~ 209 (476)
.+..++++++.+++.+..| ++.+..++++|+|+++++..++.+... ++ +.|+++.+.|.++..+++.+|++++
T Consensus 129 ~G~~~lr~~ia~~~~~~~gG~~~~~~~i~~t~G~~~ai~~~~~~l~~--~gd~~~d~Vlv~~p~y~~~~~~~~~~g~~~v 206 (498)
T 3ihj_A 129 QGVNCIREDVAAYITRRDGGVPADPDNIYLTTGASDGISTILKILVS--GGGKSRTGVMIPIPQYPLYSAVISELDAIQV 206 (498)
T ss_dssp CSCHHHHHHHHHHHHHHTTTCCCCGGGEEEESSHHHHHHHHHHHHCC--CCGGGSEEEEEEESCCTHHHHHHHHTTCEEE
T ss_pred CCHHHHHHHHHHHHHHhcCCCCCCcccEEEcCCHHHHHHHHHHHHcC--CCCCCCCEEEEeCCCchhHHHHHHHcCCEEE
Confidence 3667999999999999885 764556799999999999999888765 55 4999999999999999999999999
Q ss_pred EEeCCCC--CccCHHHHHHHHHcCCC--CcEEEEEeeCCCccccc---cCHHHHHHHHHHhCCCCCceEEEEecCccccc
Q 011842 210 KVDCLIS--GEIDCADFKAKLLQNKD--KPAIINVNIGTTVKGAV---DDLDLVIQTLEESGFTQDRFYIHCDGALFGLM 282 (476)
Q Consensus 210 ~v~~~~~--g~~D~~~Le~~l~~~~~--~p~~vv~t~gtt~tG~i---d~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~ 282 (476)
.++++++ +.+|+++|+++|++... ++.+|+++++.|+||.+ +++++|+++|++||+ ++++|++|+.+.
T Consensus 207 ~~~~~~~~~~~~d~~~le~~l~~~~~~~~~k~i~l~np~NPTG~v~s~~~l~~i~~la~~~~~-----~li~De~y~~~~ 281 (498)
T 3ihj_A 207 NYYLDEENCWALNVNELRRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKL-----FLLADEVYQDNV 281 (498)
T ss_dssp EEECBGGGTTBCCHHHHHHHHHHHTTTSEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTC-----EEEEECTTTTCB
T ss_pred EeeccccccCCCCHHHHHHHHHhhhccCCCeEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCc-----EEEEEcCccccc
Confidence 9999854 58999999999986421 34577778999999999 457889999999999 999999998766
Q ss_pred cccc-ccCCCCCCc--------cccc-EEEEcCCCCCC--CCCCceeEEe---ehhhhhhhcCCccccCCCCCcccCCCC
Q 011842 283 MPFV-KKAPKVSFK--------KPIG-SVSVSGHKFVG--CPMPCGVQIT---RMEHINVLSSNVEYLASRDATIMGSRN 347 (476)
Q Consensus 283 ~~~~-~~~~~~~~~--------~~~D-si~~s~hK~l~--~p~~~G~l~~---~~~~~~~l~~~~~yl~~~~~~~~~sr~ 347 (476)
+... ...+..... ..+. ++..|++|.+. +++++|++++ ++++++.+...... ..+
T Consensus 282 ~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~~~~l~~~l~~~~~~--------~~~-- 351 (498)
T 3ihj_A 282 YSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINLHPEIKGQLVKLLSV--------RLC-- 351 (498)
T ss_dssp CCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSCCEEEEEESCCHHHHHHHHHHHHH--------SCC--
T ss_pred cCCCCCcCCHHHHHHHhcccccCceeEEEEeccccccccCcccceEEEEEecCCHHHHHHHHHHHhc--------cCC--
Confidence 5422 111111110 1122 45568999983 7899999984 55555544221110 011
Q ss_pred ChhHHHHHHHHHHhCh------------hcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEE-ecCC--------
Q 011842 348 GHAPIFLWYTLNRKGY------------KGFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVF-ERPQ-------- 406 (476)
Q Consensus 348 ~~~~l~~~~~l~~~g~------------~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f-~~~~-------- 406 (476)
...+.+++....+.. +..+++.+++.++++++.+.|++.+...+.++..+++.| +...
T Consensus 352 -~~~~~q~a~~~~l~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~p~gg~~~~~~l~~p~~~~~~~ 430 (498)
T 3ihj_A 352 -PPVSGQAAMDIVVNPPVAGEESFEQFSREKESVLGNLAKKAKLTEDLFNQVPGIHCNPLQGAMYAFPRIFIPAKAVEAA 430 (498)
T ss_dssp -CCHHHHHHHHHHTCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEECCCCCBSSEECCEECCCHHHHHHH
T ss_pred -CCHHHHHHHHHHhcCCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEecCCCeEEEEEEeccCchhhhHHH
Confidence 123444443333321 123456677888999999999998444455555555554 2221
Q ss_pred ------cHHH-----hh--ceee-c-------ccCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhc
Q 011842 407 ------DEEF-----VR--RWQL-A-------CQGNIAHVVVMPNVTIDKLDDFLNELIENRSTWYED 453 (476)
Q Consensus 407 ------~~~~-----~~--~~~l-~-------~~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~~~ 453 (476)
++++ .+ +..+ + .....+|+++. .++++++.+++.|.++.+++++.
T Consensus 431 ~~~g~~~~~~~~~~ll~~~gI~v~pG~~f~~~~~~~~~Ris~~--~~~e~l~~~i~~L~~~~~~~~~~ 496 (498)
T 3ihj_A 431 QAHQMAPDMFYCMKLLEETGICVVPGSGFGQREGTYHFRMTIL--PPVEKLKTVLQKVKDFHINFLEK 496 (498)
T ss_dssp HHTTSCHHHHHHHHHHHHHCBCCEEGGGTCCCTTCCBEEEECC--SCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEeC--CCHHHHHHHHHHHHHHHHHHHHH
Confidence 1111 11 2222 1 12357999884 79999999999999998888764
No 135
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=99.89 E-value=2.9e-22 Score=205.35 Aligned_cols=295 Identities=8% Similarity=-0.075 Sum_probs=196.6
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeC-C
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDC-L 214 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~-~ 214 (476)
+..++++++.+|+.+..+.+ +..++++|+||++|+..++.+..+ ||+.|+++.++|.++...++..|++++.+|. +
T Consensus 80 g~~~lr~~la~~~~~~~~~~-~~~~i~~t~g~~~al~~~~~~~~~--~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~ 156 (413)
T 3t18_A 80 GEKDYRKIVIDTLFGPYKPE-GYISAIATPGGTGAIRSAIFSYLD--EGDPLICHDYYWAPYRKICEEFGRNFKTFEFFT 156 (413)
T ss_dssp CCHHHHHHHHHHHHGGGCCS-SEEEEEEESHHHHHHHHHHHHHCC--SSCEEEEESSCCTHHHHHHHHHTCEEEEECCBC
T ss_pred CCHHHHHHHHHHHhcccCcc-ccCcEEEcCccHHHHHHHHHHhcC--CCCEEEECCCCcccHHHHHHHhCCeEEEeeccC
Confidence 45689999999987766544 234699999999999999988765 8999999999999999999999999999998 4
Q ss_pred CCCccCHHHHHHHHHc----CCCCcEEEEEeeC-CCccccccCHHHHH---HHHH------HhCCCCCceEEEEecCccc
Q 011842 215 ISGEIDCADFKAKLLQ----NKDKPAIINVNIG-TTVKGAVDDLDLVI---QTLE------ESGFTQDRFYIHCDGALFG 280 (476)
Q Consensus 215 ~~g~~D~~~Le~~l~~----~~~~p~~vv~t~g-tt~tG~id~l~~I~---~ia~------~~g~~~~~~~lhvD~a~~g 280 (476)
+++.+|+++|++++.+ +++ .+++++++ .|+||.+.|.+++. ++|+ +||+ ++++|++|.+
T Consensus 157 ~~~~~d~~~l~~~l~~~~~~~~~--~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~-----~li~De~y~~ 229 (413)
T 3t18_A 157 DDFAFNIDVYKEAIDEGIRDSDR--IASLINSPGNNPTGYSLSDEEWDEVITFLKEKAEDKDKKI-----TLIVDVAYLE 229 (413)
T ss_dssp TTSSBCHHHHHHHHHHHHHHCSE--EEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTTSTTCEE-----EEEEECTTGG
T ss_pred CCCCcCHHHHHHHHHHHhhcCCC--EEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhccCCcE-----EEEEeccccc
Confidence 5579999999999976 332 36778888 89999998765555 5555 8999 9999999976
Q ss_pred ccccccccCCCCCC----ccc-ccEEEEcCCCCCC-CCCCceeEEe---ehhhhhhhcCCccccCCCCCcccCCCCChhH
Q 011842 281 LMMPFVKKAPKVSF----KKP-IGSVSVSGHKFVG-CPMPCGVQIT---RMEHINVLSSNVEYLASRDATIMGSRNGHAP 351 (476)
Q Consensus 281 ~~~~~~~~~~~~~~----~~~-~Dsi~~s~hK~l~-~p~~~G~l~~---~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~ 351 (476)
+........+.... .+. ..++..|++|.++ .++++|++++ +.++++.+.....+.. .++......
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 303 (413)
T 3t18_A 230 FAGDGDQQRKFFEKFSNLPRNLFVVVAFSMSKSHTAYGLRSGAAVGISSSKEIIEEFEASLAHSA------RCNWSNGTH 303 (413)
T ss_dssp GSSSSSTTTGGGGGGTTCCTTEEEEEEEEHHHHTTCGGGCCEEEEEEESCHHHHHHHHHHHHHHH------HHHTSSCCH
T ss_pred ccCChhhHHHHHHHHhhcCCCeeEEEEEecCccCCCcCcCcEEEEEecCCHHHHHHHHHHHHHhh------hccccCCCh
Confidence 65432211111111 111 1256679999887 7889999998 6766655532222210 000000123
Q ss_pred HHHHHHHHHhChh-------cHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecCCcHHHh-----hceeeccc
Q 011842 352 IFLWYTLNRKGYK-------GFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERPQDEEFV-----RRWQLACQ 419 (476)
Q Consensus 352 l~~~~~l~~~g~~-------g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~~~~~~-----~~~~l~~~ 419 (476)
+.+.++...+... ..++..++..++++++.+.|++.|+....++...++++...+..++. +++.+...
T Consensus 304 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~~g 383 (413)
T 3t18_A 304 AAQNILIELERAENKKIYEQELVDLRNMLKSRADVFVTAAKENKLTMIPYFGGFFTFIPTDKAFDIVKDLEKENIFTIPS 383 (413)
T ss_dssp HHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCBCCCSSSCEEEECSCHHHHHHHHHHTTEECEEC
T ss_pred HHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccCCCceEEEEeCCCCHHHHHHHHHhCCEEEecC
Confidence 4444444444322 23455677788899999999998765443333334444444433333 23344455
Q ss_pred CCEEEEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 011842 420 GNIAHVVVMPNVTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 420 ~~~lRv~~~~~~T~edid~~~~~l~~~~~~~ 450 (476)
++.+|+++...++++. ++.|.++.+++
T Consensus 384 ~~~iRis~~~~~~~~~----l~~l~~~l~~~ 410 (413)
T 3t18_A 384 AKGIRVAICGVGEEKI----PKLVQRLAFYT 410 (413)
T ss_dssp SSEEEECTTTSCGGGH----HHHHHHHHHHH
T ss_pred CCceEEEEeeCCHHHH----HHHHHHHHHHH
Confidence 6789998764344333 55555555444
No 136
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.89 E-value=4.6e-21 Score=197.32 Aligned_cols=280 Identities=14% Similarity=0.066 Sum_probs=188.3
Q ss_pred HHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCC-CCccCHH
Q 011842 144 VLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLI-SGEIDCA 222 (476)
Q Consensus 144 ~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~-~g~~D~~ 222 (476)
+++.+++++|.+ .+++|+|||+|+..++.++. +++.|+++.++|.++..+++..|++++.+++++ ++.+|++
T Consensus 57 l~~~la~~~~~~----~v~~~~ggt~al~~~l~~l~---~gd~Vlv~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~d~~ 129 (424)
T 2po3_A 57 FEERVAGLAGVR----HAVATCNATAGLQLLAHAAG---LTGEVIMPSMTFAATPHALRWIGLTPVFADIDPDTGNLDPD 129 (424)
T ss_dssp HHHHHHHHHTSS----EEEEESCHHHHHHHHHHHHT---CCSEEEEESSSCTHHHHHHHHTTCEEEEECBCTTTSSBCHH
T ss_pred HHHHHHHHhCCC----eEEEeCCHHHHHHHHHHHcC---CCCEEEECCCccHHHHHHHHHcCCEEEEEecCCCcCCcCHH
Confidence 344456666764 38999999999999998874 679999999999999999999999999999986 6789999
Q ss_pred HHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcc-cccccccccCCCCCCcccccEE
Q 011842 223 DFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALF-GLMMPFVKKAPKVSFKKPIGSV 301 (476)
Q Consensus 223 ~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~-g~~~~~~~~~~~~~~~~~~Dsi 301 (476)
+|++++.+++ .+|++++ ++|.+.++++|.++|++||+ ++++|++|+ +..+. ... +. ...|++
T Consensus 130 ~l~~~i~~~~---~~v~~~~---~tG~~~~l~~i~~la~~~~~-----~li~Dea~~~g~~~~-~~~---~~--~~~di~ 192 (424)
T 2po3_A 130 QVAAAVTPRT---SAVVGVH---LWGRPCAADQLRKVADEHGL-----RLYFDAAHALGCAVD-GRP---AG--SLGDAE 192 (424)
T ss_dssp HHGGGCCTTE---EEEEEEC---GGGCCCCHHHHHHHHHHTTC-----EEEEECTTCTTCEET-TEE---TT--SSSSEE
T ss_pred HHHHhhCcCC---cEEEEEC---CCCCcCCHHHHHHHHHHcCC-----EEEEECccccCCeEC-Cee---cc--cccCEE
Confidence 9999886543 3666654 68999999999999999999 999999998 44432 111 11 114677
Q ss_pred EEcCC--CCCCCCCCceeEEee-hhhhhhhcCCccccCCCCCc--ccCCCCChhHHHHHHHHHHhChhcHHHHHHHHHHH
Q 011842 302 SVSGH--KFVGCPMPCGVQITR-MEHINVLSSNVEYLASRDAT--IMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRN 376 (476)
Q Consensus 302 ~~s~h--K~l~~p~~~G~l~~~-~~~~~~l~~~~~yl~~~~~~--~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~ 376 (476)
+.|+| |++++ +++|+++.+ +++++.+.....+......+ ..+.......+..+.++.. .+.+++..++..++
T Consensus 193 ~~S~sk~K~l~~-~~~G~~v~~~~~l~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~--~~~~~~~~~~~~~~ 269 (424)
T 2po3_A 193 VFSFHATKAVNA-FEGGAVVTDDADLAARIRALHNFGFDLPGGSPAGGTNAKMSEAAAAMGLTS--LDAFPEVIDRNRRN 269 (424)
T ss_dssp EEECCTTSSSCC-SSCEEEEESCHHHHHHHHHHHBTTTTCTTCCTTCCCBCCCCHHHHHHHHHH--HHHHHHHHHHHHHH
T ss_pred EEeCCCCCCccC-CCCeEEEeCCHHHHHHHHHHHhcCccccccccccCcCCCcCHHHHHHHHHH--HHHHHHHHHHHHHH
Confidence 77766 98875 789999998 55554442211111000000 1111111233444444433 35677788888899
Q ss_pred HHHHHHHHHhc-CCeEeecC-C--e--eEEEEecC------CcHHHh-----hceeec--cc------------------
Q 011842 377 AHYLKDRLLDA-GISAMLNE-L--S--STVVFERP------QDEEFV-----RRWQLA--CQ------------------ 419 (476)
Q Consensus 377 a~~l~~~L~~~-g~~~~~~~-~--~--~iv~f~~~------~~~~~~-----~~~~l~--~~------------------ 419 (476)
++++.+.|++. ++.....+ . . .++.+..+ +..++. +++.+. +.
T Consensus 270 ~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~g~~~~~ 349 (424)
T 2po3_A 270 HAAYREHLADLPGVLVADHDRHGLNNHQYVIVEIDEATTGIHRDLVMEVLKAEGVHTRAYFSPGCHELEPYRGQPHAPLP 349 (424)
T ss_dssp HHHHHHHTCSCTTEEECCGGGGSCCCCCCEEEEECHHHHSSCHHHHHHHHHHTTEECBCTTCSCGGGSTTTTTSCCCCCH
T ss_pred HHHHHHHhccCCCccccCCCCCCccccEEEEEEECCccchhhHHHHHHHHHHCCCceecccCCccccchhhhhcCCCCCh
Confidence 99999999887 44333212 2 1 34445444 222222 122221 11
Q ss_pred ------CCEEEEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 011842 420 ------GNIAHVVVMPNVTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 420 ------~~~lRv~~~~~~T~edid~~~~~l~~~~~~~ 450 (476)
...+|+.++..+|++||++++++|+++.+..
T Consensus 350 ~~~r~~~~~l~l~~~~~~t~e~i~~~~~~L~~~~~~~ 386 (424)
T 2po3_A 350 HTERLAARVLSLPTGTAIGDDDIRRVADLLRLCATRG 386 (424)
T ss_dssp HHHHHHTTEEEECCSTTCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHhcCEEEeeCCCCCCHHHHHHHHHHHHHHHhhh
Confidence 0127777779999999999999999887554
No 137
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.89 E-value=7.4e-22 Score=202.75 Aligned_cols=277 Identities=13% Similarity=0.082 Sum_probs=191.4
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHH----HHcCCeEEEEeCC
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAA----RMYRMECVKVDCL 214 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~----~~~G~~v~~v~~~ 214 (476)
...+++++++++++|.+ .+++|+|||+|+..++.++.. +++.|+++.++|.++.... +..|++++.++.
T Consensus 56 ~~~~~l~~~la~~~g~~----~~~~~~~gt~a~~~al~~l~~--~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~- 128 (412)
T 2cb1_A 56 PTAKALEERLKALEGAL----EAVVLASGQAATFAALLALLR--PGDEVVAAKGLFGQTIGLFGQVLSLMGVTVRYVDP- 128 (412)
T ss_dssp HHHHHHHHHHHHHHTCS----EEEEESSHHHHHHHHHHTTCC--TTCEEEEETTCCHHHHHHHHHTTTTTTCEEEEECS-
T ss_pred hHHHHHHHHHHHHhCCC----cEEEECCHHHHHHHHHHHHhC--CCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECC-
Confidence 45667778889999875 389999999999999987744 8999999999999876653 456899999986
Q ss_pred CCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCC
Q 011842 215 ISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSF 294 (476)
Q Consensus 215 ~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~ 294 (476)
|+++|+++|++++ .+|+++++++++|.+.|+++|+++|++||+ ++|+|++|+.+.... .. .
T Consensus 129 -----~~~~l~~~i~~~~---~~v~~~~~~n~~G~~~~l~~i~~l~~~~~~-----~li~D~~~~~~~~~~-~~---~-- 189 (412)
T 2cb1_A 129 -----EPEAVREALSAKT---RAVFVETVANPALLVPDLEALATLAEEAGV-----ALVVDNTFGAAGALC-RP---L-- 189 (412)
T ss_dssp -----SHHHHHHHCCTTE---EEEEEESSCTTTCCCCCHHHHHHHHHHHTC-----EEEEECGGGTTTTSC-CG---G--
T ss_pred -----CHHHHHHHhccCC---eEEEEeCCCCCCcccccHHHHHHHHHHcCC-----EEEEECCCccccccC-Cc---c--
Confidence 4889999987644 488889999999999999999999999999 999999998652111 00 1
Q ss_pred cccccEEEEcCCCCCCCCCC-ceeEEeeh-hhh----hhhcCCc-------------cccCC-CCC--cccCCCCChhHH
Q 011842 295 KKPIGSVSVSGHKFVGCPMP-CGVQITRM-EHI----NVLSSNV-------------EYLAS-RDA--TIMGSRNGHAPI 352 (476)
Q Consensus 295 ~~~~Dsi~~s~hK~l~~p~~-~G~l~~~~-~~~----~~l~~~~-------------~yl~~-~~~--~~~~sr~~~~~l 352 (476)
...+|+++.|+||++++|.+ +|++++++ +.. ..+.... .+... ... ...+. ...+.
T Consensus 190 ~~~~di~~~S~~K~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~g~--~~~~~ 267 (412)
T 2cb1_A 190 AWGAHVVVESLTKWASGHGSVLGGAVLSRETELWRNYPQFLQPDLKGQIPWEALRARCFPERVRTLGLSLCGM--ALSPF 267 (412)
T ss_dssp GGTCSEEEEETTTTTTCSSCCCCEEEEECCCSGGGGSGGGGCC-------HHHHGGGHHHHHHHHHHTTTTCC--CCCHH
T ss_pred ccCCeEEEECCcccccCCCCcEEEEEEeccccccccccccccccccccchhhccchHHHHHHHHHHHHHhcCC--CCChH
Confidence 12389999999999987654 88887765 310 0000000 00000 000 00111 12345
Q ss_pred HHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhc-CCeEeecC-----------------CeeEEEEecCCcHH---Hh
Q 011842 353 FLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDA-GISAMLNE-----------------LSSTVVFERPQDEE---FV 411 (476)
Q Consensus 353 ~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~-g~~~~~~~-----------------~~~iv~f~~~~~~~---~~ 411 (476)
..|..+.. .+.+.+++++..+++++|.+.|.+. ++..+..| ..+++.|...+.+. +.
T Consensus 268 ~a~~~~~~--l~~l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~~~~~p~~~~~~~~~~~~~~iv~~~~~~~~~~~~~l 345 (412)
T 2cb1_A 268 NAYLLFQG--LETVALRVARMSETARFLAERLQGHPKVKALRYPGLPEDPAHRNARKYLASGGPILTLDLGDLERASRFL 345 (412)
T ss_dssp HHHHHHHH--GGGHHHHHHHHHHHHHHHHHHHHTCTTCSEEECTTSTTCTTHHHHHHHCSSSCSEEEEECSSHHHHHHHH
T ss_pred HhHHHHcC--CchHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEeCCHHHHHHHH
Confidence 55555543 3556778888889999999999986 44434222 24688888732221 22
Q ss_pred hce--ee------------ccc------------------CCEEEEEEcCCCCHHHHHHHHHHHHH
Q 011842 412 RRW--QL------------ACQ------------------GNIAHVVVMPNVTIDKLDDFLNELIE 445 (476)
Q Consensus 412 ~~~--~l------------~~~------------------~~~lRv~~~~~~T~edid~~~~~l~~ 445 (476)
+.. .+ .|. .+.+|++++..+|+++|+.|+++|++
T Consensus 346 ~~~~i~~~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iR~s~g~~~~~~~i~~l~~al~~ 411 (412)
T 2cb1_A 346 GAIRLLKAANLGDARTLLVHPWTTTHSRLKEEARLQAGVTPGLVRVSVGLEDPLDLLALFEEALEA 411 (412)
T ss_dssp HHCSSEECSCCSCSSCEEECTTTTTTTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHC
T ss_pred HhCCeeeecccCCCcceeecCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHhh
Confidence 211 11 110 46899999999999999999999864
No 138
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=99.89 E-value=3.3e-21 Score=194.05 Aligned_cols=277 Identities=10% Similarity=-0.010 Sum_probs=192.1
Q ss_pred HHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCC
Q 011842 138 RQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISG 217 (476)
Q Consensus 138 ~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g 217 (476)
.+++++ +++++|.++ ..+++|+|+|+++..++.++ +++.|++..++|.++...++..|++++.+|.+++.
T Consensus 62 ~~l~~~----la~~~~~~~--~~v~~~~g~~~al~~~~~~~----~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~ 131 (364)
T 1lc5_A 62 FHLHQA----LARHHQVPA--SWILAGNGETESIFTVASGL----KPRRAMIVTPGFAEYGRALAQSGCEIRRWSLREAD 131 (364)
T ss_dssp HHHHHH----HHHHHTSCG--GGEEEESSHHHHHHHHHHHH----CCSEEEEEESCCTHHHHHHHHTTCEEEEEECCGGG
T ss_pred HHHHHH----HHHHHCcCH--HHEEECCCHHHHHHHHHHHc----CCCeEEEeCCCcHHHHHHHHHcCCeEEEEeCCccc
Confidence 355555 555567764 35999999999999988877 45899999999999999999999999999987533
Q ss_pred ccC-HHHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCC
Q 011842 218 EID-CADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVS 293 (476)
Q Consensus 218 ~~D-~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~ 293 (476)
.++ ++++.+.+.+++ .+|++++++|++|.+.| +++|+++|++||+ ++++|++|+.+.... .+.+.
T Consensus 132 ~~~~l~~~~~~~~~~~---~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~-----~li~De~~~~~~~~~---~~~~~ 200 (364)
T 1lc5_A 132 GWQLTDAILEALTPDL---DCLFLCTPNNPTGLLPERPLLQAIADRCKSLNI-----NLILDEAFIDFIPHE---TGFIP 200 (364)
T ss_dssp TTCCCTTHHHHCCTTC---CEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTC-----EEEEECTTGGGSTTC---CCSGG
T ss_pred ccchhHHHHHhccCCC---CEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCc-----EEEEECcChhhccCc---cchhh
Confidence 344 344444443333 37777889999999988 9999999999999 999999998765421 11122
Q ss_pred C-c-ccccEEEEcCCCCCC-CCCCceeEE-eehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhCh-hcHHH
Q 011842 294 F-K-KPIGSVSVSGHKFVG-CPMPCGVQI-TRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGY-KGFQK 368 (476)
Q Consensus 294 ~-~-~~~Dsi~~s~hK~l~-~p~~~G~l~-~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~-~g~~~ 368 (476)
. . ...++++.++||+++ .++++|+++ .++++++.+..... + .+ ...+.++++...+.. +.+++
T Consensus 201 ~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~l~~~~~-------~--~~---~~~~~~~~~~~~l~~~~~~~~ 268 (364)
T 1lc5_A 201 ALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDDAAMARMRRQQM-------P--WS---VNALAALAGEVALQDSAWQQA 268 (364)
T ss_dssp GCTTCTTEEEEEESTTTTTCTTTCCEEEECCCHHHHHHHHHHSC-------T--TC---SCHHHHHHHHHGGGCHHHHHH
T ss_pred HhccCCCEEEEEECchhhcCCccceEEEEECCHHHHHHHHHhCC-------C--CC---CCHHHHHHHHHHHhCcHHHHH
Confidence 1 1 236788899999997 667899999 88777655532111 0 11 124555666555543 34677
Q ss_pred HHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecCCc-HHHh-----hceeecc-------cCCEEEEEEcCCCCHHH
Q 011842 369 EVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERPQD-EEFV-----RRWQLAC-------QGNIAHVVVMPNVTIDK 435 (476)
Q Consensus 369 ~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~~-~~~~-----~~~~l~~-------~~~~lRv~~~~~~T~ed 435 (476)
..++..++++++.+.|++.+...+.++..+++.+..+.+ ..+. +++.+.. ..+.+|+++. +.++
T Consensus 269 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~iRis~~---~~~~ 345 (364)
T 1lc5_A 269 TWHWLREEGARFYQALCQLPLLTVYPGRANYLLLRCEREDIDLQRRLLTQRILIRSCANYPGLDSRYYRVAIR---SAAQ 345 (364)
T ss_dssp HHHHHHHHHHHHHHHHHTSTTEEECCCSSSEEEEEESCTTCCHHHHHHTTTEECEECTTSTTCCTTEEEEECC---CHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCEECCCCCeEEEEECCCcHHHHHHHHHHCCcEEeeCcccCCCCCCEEEEEeC---CHHH
Confidence 778888899999999998733344455566666766532 1221 2333321 1468999964 6999
Q ss_pred HHHHHHHHHHHHHHH
Q 011842 436 LDDFLNELIENRSTW 450 (476)
Q Consensus 436 id~~~~~l~~~~~~~ 450 (476)
+++++++|+++.+.+
T Consensus 346 ~~~l~~~l~~~~~~~ 360 (364)
T 1lc5_A 346 NERLLAALRNVLTGI 360 (364)
T ss_dssp HHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHhhcc
Confidence 999999999886554
No 139
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.89 E-value=7e-22 Score=201.54 Aligned_cols=286 Identities=13% Similarity=0.038 Sum_probs=196.2
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHH---HHHHHHcCCe--EEEEeC
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSV---FKAARMYRME--CVKVDC 213 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~---~~~~~~~G~~--v~~v~~ 213 (476)
.+|+.+++++++++|.++. -+++++||+|+..++.++.. +++.|++++++|.++ ...++..|+. .+.+++
T Consensus 69 ~~e~~ar~~la~~~g~~~~---~i~~~sGt~a~~~~~~~~~~--~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 143 (407)
T 2dkj_A 69 RVESLAIERAKALFGAAWA---NVQPHSGSQANMAVYMALME--PGDTLMGMDLAAGGHLTHGSRVNFSGKLYKVVSYGV 143 (407)
T ss_dssp HHHHHHHHHHHHHHTCSEE---ECCCSSHHHHHHHHHHHHCC--TTCEEEEECGGGTCCGGGTCTTSHHHHHSEEEEECC
T ss_pred HHHHHHHHHHHHHhCCCcc---eEEecchHHHHHHHHHHhcC--CCCEEEEecccccCccchHHHHHhcCceEEEEecCC
Confidence 5666677899999998732 35556678899999888854 899999999999887 3555566664 444444
Q ss_pred C-CCCccCHHHHHHHHHc-CCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCC
Q 011842 214 L-ISGEIDCADFKAKLLQ-NKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPK 291 (476)
Q Consensus 214 ~-~~g~~D~~~Le~~l~~-~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~ 291 (476)
+ .++.+|+++|++++++ +++ +|+++++.+ |.+.|+++|.++|++||+ ++++|++|+.+..+.......
T Consensus 144 ~~~~~~~d~~~l~~~l~~~~~~---~v~~~~p~~--~~~~~l~~i~~l~~~~~~-----~li~Dea~~~g~~~~~~~~~~ 213 (407)
T 2dkj_A 144 RPDTELIDLEEVRRLALEHRPK---VIVAGASAY--PRFWDFKAFREIADEVGA-----YLVVDMAHFAGLVAAGLHPNP 213 (407)
T ss_dssp CTTTSSCCHHHHHHHHHHHCCS---EEEECCSSC--CSCCCHHHHHHHHHHHTC-----EEEEECTTTHHHHHTTCSCCC
T ss_pred CcccCccCHHHHHHHHhhcCCe---EEEEecccc--CCCCCHHHHHHHHHHcCC-----EEEEEccccccccccCccCCc
Confidence 4 3678999999999985 554 666655655 478899999999999999 999999998644322221111
Q ss_pred CCCcccccEEEEcCCCCCCCCCCceeEEee-hhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHH
Q 011842 292 VSFKKPIGSVSVSGHKFVGCPMPCGVQITR-MEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEV 370 (476)
Q Consensus 292 ~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~-~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~ 370 (476)
+ ...|+++.++||++++|. +|+++++ +++++.+....... ..++.+......+.+++......++++..
T Consensus 214 ~---~~~di~~~s~sK~l~g~~-~G~~~~~~~~~~~~l~~~~~~~------~~~~~~~~~~~a~~~al~~~~~~~~~~~~ 283 (407)
T 2dkj_A 214 L---PYAHVVTSTTHKTLRGPR-GGLILSNDPELGKRIDKLIFPG------IQGGPLEHVIAGKAVAFFEALQPEFKEYS 283 (407)
T ss_dssp T---TTCSEEEEESSGGGCCCS-CEEEEESCHHHHHHHHHHHTTT------TCSSCCHHHHHHHHHHHHHHHSHHHHHHH
T ss_pred c---ccccEEEEeccccCCCCC-ceEEEECCHHHHHHHHhhhccc------ccCCCcHHHHHHHHHHHHHHHHhhHHHHH
Confidence 1 237999999999988654 5999999 56665543211110 01222211122444555554446788899
Q ss_pred HHHHHHHHHHHHHHHhcCCeEeec-CCeeEEEEecCC----cHHHh-----hceeecc-----------cCCEEEEEEcC
Q 011842 371 QKCLRNAHYLKDRLLDAGISAMLN-ELSSTVVFERPQ----DEEFV-----RRWQLAC-----------QGNIAHVVVMP 429 (476)
Q Consensus 371 ~~~~~~a~~l~~~L~~~g~~~~~~-~~~~iv~f~~~~----~~~~~-----~~~~l~~-----------~~~~lRv~~~~ 429 (476)
++..++++++.+.|++.|+....+ ...+++.+..+. ...+. +++.+.. ..+.+|++++.
T Consensus 284 ~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~iRis~~~ 363 (407)
T 2dkj_A 284 RLVVENAKRLAEELARRGYRIVTGGTDNHLFLVDLRPKGLTGKEAEERLDAVGITVNKNAIPFDPKPPRVTSGIRIGTPA 363 (407)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEECHH
T ss_pred HHHHHHHHHHHHHHHhCCceeecCCCCceEEEEECcccCCCHHHHHHHHHHcCceecCCcCccccccccCCCceeeeccc
Confidence 999999999999999987655432 356777776652 22222 2232211 13579998865
Q ss_pred ----CCCHHHHHHHHHHHHHHHHH
Q 011842 430 ----NVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 430 ----~~T~edid~~~~~l~~~~~~ 449 (476)
.+|++|+++++++|+++.++
T Consensus 364 ~~~~~~~~~~i~~~~~~l~~~~~~ 387 (407)
T 2dkj_A 364 ITTRGFTPEEMPLVAELIDRALLE 387 (407)
T ss_dssp HHHTTCCGGGHHHHHHHHHHHHHH
T ss_pred ccccCCCHHHHHHHHHHHHHHHhc
Confidence 48999999999999998765
No 140
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=99.89 E-value=1.7e-21 Score=201.49 Aligned_cols=297 Identities=9% Similarity=-0.069 Sum_probs=194.7
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCc--------------EEEec-CCCchHHHHH
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDG--------------ILYAS-RESHYSVFKA 200 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~--------------~Vl~s-~~~H~S~~~~ 200 (476)
+..++++++.+++.+..|+..+...+++|+|+|+|+..++.++.. +++ .|+++ .++|..+...
T Consensus 84 g~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~~--~gd~~~~~~~~~~g~~~~vi~~~~p~~~~~~~~ 161 (444)
T 3if2_A 84 GDSAFIDALVGFFNRHYDWNLTSENIALTNGSQNAFFYLFNLFGG--AFVNEHSQDKESKSVDKSILLPLTPEYIGYSDV 161 (444)
T ss_dssp CCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHSSE--EEECC-------CEEEEEEEESSSSCCGGGTTC
T ss_pred CCHHHHHHHHHHHHhhcCCCCCHHHEEEecCcHHHHHHHHHHHhC--CCccccccccccccccceEEEeCCCCccchhhc
Confidence 467999999999998888765556799999999999999888765 665 66664 7788777653
Q ss_pred H------HHcCCeEEEEeCCC-CC----ccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCC
Q 011842 201 A------RMYRMECVKVDCLI-SG----EIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFT 266 (476)
Q Consensus 201 ~------~~~G~~v~~v~~~~-~g----~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~ 266 (476)
+ ...|..++.++.++ +| .+|+++|+++|...+.++.+|+++++++++|.+.| +++|+++|++||+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~- 240 (444)
T 3if2_A 162 HVEGQHFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALKEGRIGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDI- 240 (444)
T ss_dssp CSSSCCEEECCCEEEEEEETTEEEEEEEECCHHHHHTCHHHHTTCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTC-
T ss_pred ccccchhhccCceEEecccccccCccccCCCHHHHHHHHHhcCCCceEEEeCCCCCCCCCcCCHHHHHHHHHHHHHCCC-
Confidence 2 33467788888775 33 79999999985431223457888889999999988 8999999999999
Q ss_pred CCceEEEEecCcccccccccccCCCCCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCC
Q 011842 267 QDRFYIHCDGALFGLMMPFVKKAPKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSR 346 (476)
Q Consensus 267 ~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr 346 (476)
++|+|++|+.+.. ..............++++.++||+++.++++|+++.++++++.+.....+. ..+.
T Consensus 241 ----~li~De~~~~~~~-~~~~~~~~~~~~~~~i~~~S~sK~~~~G~r~G~~~~~~~l~~~~~~~~~~~-------~~~~ 308 (444)
T 3if2_A 241 ----PLIIDNAYGMPFP-NIIYSDAHLNWDNNTILCFSLSKIGLPGMRTGIIVADAKVIEAVSAMNAVV-------NLAP 308 (444)
T ss_dssp ----CEEEECTTCTTTT-CCBCSCCCCCCCTTEEEEEESTTTTCGGGCCEEEECCHHHHHHHHHHHHHH-------HSSC
T ss_pred ----EEEEECCCCCccc-ccccccccccCCCCEEEEechhhccCCCCceEEEEECHHHHHHHHHHHHhc-------cCCC
Confidence 9999999975321 111111011112367888999999877899999999888765553221111 0111
Q ss_pred CChhHHHHHHHHHHhChhc----HHH-HHHHHHHHHHHHHHHHHhc----CCeEeecCCeeEEEEecCC----cHHHh--
Q 011842 347 NGHAPIFLWYTLNRKGYKG----FQK-EVQKCLRNAHYLKDRLLDA----GISAMLNELSSTVVFERPQ----DEEFV-- 411 (476)
Q Consensus 347 ~~~~~l~~~~~l~~~g~~g----~~~-~~~~~~~~a~~l~~~L~~~----g~~~~~~~~~~iv~f~~~~----~~~~~-- 411 (476)
+. +.+.++...+.... .++ ..++..++++++.+.|++. ++....+....++.+..+. ..++.
T Consensus 309 ~~---~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~ 385 (444)
T 3if2_A 309 TR---FGAAIATPLVANDRIKQLSDNEIKPFYQKQATLAVKLLKQALGDYPLMIHKPEGAIFLWLWFKDLPISTLDLYER 385 (444)
T ss_dssp CC---HHHHHHHHHHHTSHHHHHHHHTHHHHHHHHHHHHHHHHHHHSSSSSEEEECCCBSSEEEEEETTCSSCHHHHHHH
T ss_pred Ch---HHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEecCCccEEEEEEcCCCCCCHHHHHHH
Confidence 11 22222222221111 122 4445566777777777662 3333333444555555442 23332
Q ss_pred ---hceeec----cc-----------CCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHh
Q 011842 412 ---RRWQLA----CQ-----------GNIAHVVVMPNVTIDKLDDFLNELIENRSTWYE 452 (476)
Q Consensus 412 ---~~~~l~----~~-----------~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~~ 452 (476)
+++.+. +. .+.+|+++.. |+++|+.+++.|.++.+++++
T Consensus 386 l~~~gi~v~~g~~~~~~~~~~~~~~~~~~iRis~~~--~~e~i~~~l~~l~~~~~~~~~ 442 (444)
T 3if2_A 386 LKAKGTLIVPSEYFFPGVDVSDYQHAHECIRMSIAA--DEQTLIDGIKVIGEVVRELYD 442 (444)
T ss_dssp HHHTTEECEEGGGSCTTCCCTTCSGGGSEEEEESSS--CHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHCCeEEecchhhcCCCCCcccccCCCeEEEEEeC--CHHHHHHHHHHHHHHHHHHHc
Confidence 223331 11 1579998876 999999999999999888764
No 141
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.89 E-value=3.8e-21 Score=195.44 Aligned_cols=278 Identities=12% Similarity=0.032 Sum_probs=187.1
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhh--------CCCcEEEecCCCchHHHHHHHHcCC----
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREV--------FPDGILYASRESHYSVFKAARMYRM---- 206 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~--------~p~~~Vl~s~~~H~S~~~~~~~~G~---- 206 (476)
+..+++++++++++|.+ .+++|+|||+|+..++.+++.. ..++.|++..++|.+....+..++.
T Consensus 78 ~~~~~l~~~la~~~g~~----~v~~~~~gt~a~~~al~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~ 153 (392)
T 3ruy_A 78 DQLGPWYEKVAKLTNKE----MVLPMNTGAEAVETAIKTARRWAYDVKKVEANRAEIIVCEDNFHGRTMGAVSMSSNEEY 153 (392)
T ss_dssp TTHHHHHHHHHHHHTCS----EEEEESSHHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTCCCCSSHHHHHTCSCTTT
T ss_pred HHHHHHHHHHHHhcCCC----EEEEeCcHHHHHHHHHHHHHHhhhhccCCCCCCcEEEEEcCCcCCCCHhhhhccCChhh
Confidence 45567778888888833 3999999999999999987753 2367999989888765544433322
Q ss_pred ---------eEEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC----HHHHHHHHHHhCCCCCceEEE
Q 011842 207 ---------ECVKVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD----LDLVIQTLEESGFTQDRFYIH 273 (476)
Q Consensus 207 ---------~v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~----l~~I~~ia~~~g~~~~~~~lh 273 (476)
++..++.+ |+++|+++|+++ +.+|+++++.+++|.+.| +++|.++|++||+ ++|
T Consensus 154 ~~~~~~~~~~~~~~~~~-----d~~~l~~~l~~~---~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~-----~li 220 (392)
T 3ruy_A 154 KRGFGPMLPGIIVIPYG-----DLEALKAAITPN---TAAFILEPIQGEAGINIPPAGFLKEALEVCKKENV-----LFV 220 (392)
T ss_dssp TTTCCSCCSSEEEECTT-----CHHHHHHHCCTT---EEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTC-----EEE
T ss_pred ccccCCCCCCCeeeCcc-----cHHHHHHHhccC---eEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCC-----EEE
Confidence 25555544 899999999744 348888889999999998 9999999999999 999
Q ss_pred EecCcccccccccccCCCCCCcc-cccEEEEcCCCCCCCC-CCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhH
Q 011842 274 CDGALFGLMMPFVKKAPKVSFKK-PIGSVSVSGHKFVGCP-MPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAP 351 (476)
Q Consensus 274 vD~a~~g~~~~~~~~~~~~~~~~-~~Dsi~~s~hK~l~~p-~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~ 351 (476)
+|++|+++.... ... ..+... ..|++++| |+++++ +++|++++++++++.+...... . ..+.+ .
T Consensus 221 ~De~~~~~~~~g-~~~-~~~~~~~~~d~~~~S--K~l~gG~~~~G~~~~~~~~~~~~~~~~~~-----~--~~~~~---~ 286 (392)
T 3ruy_A 221 ADEIQTGLGRTG-KVF-ACDWDNVTPDMYILG--KALGGGVFPISCAAANRDILGVFEPGSHG-----S--TFGGN---P 286 (392)
T ss_dssp EECTTTTTTTTS-SSS-GGGGGTCCCSEEEEC--GGGGTTTSCCEEEEECHHHHTTCCTTSSC-----C--SSTTC---H
T ss_pred EeechhCCCccc-cch-hhhccCCCCCEEEEc--hhhhCChhhhEEEEECHHHHhhhccCCcC-----C--CCCCC---H
Confidence 999997543221 110 011111 26777765 988765 7899999998876554321110 1 11212 3
Q ss_pred HHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCC--eEeecCCeeEEEEecC-CcHHHh-----hceeec-ccCCE
Q 011842 352 IFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGI--SAMLNELSSTVVFERP-QDEEFV-----RRWQLA-CQGNI 422 (476)
Q Consensus 352 l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~--~~~~~~~~~iv~f~~~-~~~~~~-----~~~~l~-~~~~~ 422 (476)
+.++++...+.....++..++..++++++.+.|++.+. ....++..+++.|..+ ...++. +++.+. ...+.
T Consensus 287 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~ 366 (392)
T 3ruy_A 287 LACAVSIAALEVLEEEKLTERSLQLGEKLVGQLKEIDNPMITEVRGKGLFIGIELNEPARPYCEQLKAAGLLCKETHENV 366 (392)
T ss_dssp HHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTTCCCTTEEEEEEETTEEEEEESSCSHHHHHHHHTTTEECCCBTTTE
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhcCCCceEEEeeeeEEEEEEcchHHHHHHHHHHCCcEEecCCCCE
Confidence 33333333332111256778888999999999998753 2223333455666544 233332 233333 34589
Q ss_pred EEEEEcCCCCHHHHHHHHHHHHHHH
Q 011842 423 AHVVVMPNVTIDKLDDFLNELIENR 447 (476)
Q Consensus 423 lRv~~~~~~T~edid~~~~~l~~~~ 447 (476)
+|++++..+|++++++++++|+++.
T Consensus 367 iRi~~~~~~~~~~i~~~~~~l~~~l 391 (392)
T 3ruy_A 367 IRIAPPLVISEEDLEWAFQKIKAVL 391 (392)
T ss_dssp EEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHh
Confidence 9999999999999999999998764
No 142
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.89 E-value=5.2e-21 Score=195.29 Aligned_cols=268 Identities=15% Similarity=0.129 Sum_probs=194.9
Q ss_pred HHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHH----HHcCCeEEEEeC
Q 011842 138 RQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAA----RMYRMECVKVDC 213 (476)
Q Consensus 138 ~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~----~~~G~~v~~v~~ 213 (476)
.....++++.+++++|.+ ..++|+|||+|+..++.++.. +++.|+++.+.|.+....+ +..|++++.++.
T Consensus 65 ~~~~~~l~~~la~~~g~~----~~~~~~sGt~A~~~al~~~~~--~gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~ 138 (392)
T 3qhx_A 65 NPTRTALEAALAAVEDAA----FGRAFSSGMAAADCALRAMLR--PGDHVVIPDDAYGGTFRLIDKVFTGWNVEYTPVAL 138 (392)
T ss_dssp CHHHHHHHHHHHHHTTCS----EEEEESSHHHHHHHHHHHHCC--TTCEEEEETTCCHHHHHHHHHTGGGGTCEEEEECT
T ss_pred ChHHHHHHHHHHHHhCCC----cEEEECCHHHHHHHHHHHHhC--CCCEEEEeCCCcchHHHHHHHHHHhcCcEEEEeCC
Confidence 355667788899999886 288999999999999987754 8999999999998877665 667999999998
Q ss_pred CCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCC
Q 011842 214 LISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVS 293 (476)
Q Consensus 214 ~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~ 293 (476)
+ |+++|+++|.+++ .+|++.+++|++|.+.|+++|+++|++||+ ++|+|++|+.++.. . .
T Consensus 139 ~-----d~~~l~~~i~~~~---~~v~~~~~~nptG~~~~l~~i~~la~~~g~-----~li~D~~~~~~~~~--~-----~ 198 (392)
T 3qhx_A 139 A-----DLDAVRAAIRPTT---RLIWVETPTNPLLSIADIAGIAQLGADSSA-----KVLVDNTFASPALQ--Q-----P 198 (392)
T ss_dssp T-----CHHHHHHHCCTTE---EEEEEESSCTTTCCCCCHHHHHHHHHHHTC-----EEEEECTTTCTTTC--C-----G
T ss_pred C-----CHHHHHHhhCCCC---eEEEEECCCCCCcEEecHHHHHHHHHHcCC-----EEEEECCCcccccC--C-----h
Confidence 6 8999999997654 488888999999999999999999999999 99999999754321 0 1
Q ss_pred CcccccEEEEcCCCCCCCC--CCceeEEeeh-hhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHH
Q 011842 294 FKKPIGSVSVSGHKFVGCP--MPCGVQITRM-EHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEV 370 (476)
Q Consensus 294 ~~~~~Dsi~~s~hK~l~~p--~~~G~l~~~~-~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~ 370 (476)
....+|+++.|+||+++.+ ..+|+++.++ ++.+.+....... +.. ..++..|.+++.+ +.+..++
T Consensus 199 ~~~~~di~~~S~sK~lg~~g~~~~G~v~~~~~~~~~~l~~~~~~~--------g~~--~~~~~~~~~~~~l--~~l~~~~ 266 (392)
T 3qhx_A 199 LSLGADVVLHSTTKYIGGHSDVVGGALVTNDEELDQSFAFLQNGA--------GAV--PGPFDAYLTMRGL--KTLVLRM 266 (392)
T ss_dssp GGGTCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHHH--------CCC--CCHHHHHHHHHHH--TTHHHHH
T ss_pred HHhCCcEEEEcCccccCCCCCceEEEEEECcHHHHHHHHHHHHhc--------CCC--CCHHHHHHHHhhh--hHHHHHH
Confidence 1123899999999999965 3489999885 4544442211111 111 1245666666544 4567788
Q ss_pred HHHHHHHHHHHHHHHhcCCeE-eecCC-----------------eeEEEEecCCc----HHHhhceee------------
Q 011842 371 QKCLRNAHYLKDRLLDAGISA-MLNEL-----------------SSTVVFERPQD----EEFVRRWQL------------ 416 (476)
Q Consensus 371 ~~~~~~a~~l~~~L~~~g~~~-~~~~~-----------------~~iv~f~~~~~----~~~~~~~~l------------ 416 (476)
++..++++++.+.|++.+... +..|. ..++.|..+++ ..+...+.+
T Consensus 267 ~~~~~~~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~~l~~~~~~~s~G~~~s 346 (392)
T 3qhx_A 267 QRHSENAAAVAEFLAEHPAISTVLYPGLPSHPGHAVAARQMRGFGGMVSVRMRAGRTAAEQLCAKTNIFILAESLGSVES 346 (392)
T ss_dssp HHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTCHHHHHHHHHHCSSSEECSCCCCSSC
T ss_pred HHHHHHHHHHHHHHhcCCCcceEECCCCCCCCCHHHHHHhCCCCceEEEEEeCCcHHHHHHHHHhCCCceECCCCCCCCc
Confidence 888999999999999876432 22221 35777877652 223322211
Q ss_pred ----c--------------ccCCEEEEEEcCCCCHHHHHHHHHHH
Q 011842 417 ----A--------------CQGNIAHVVVMPNVTIDKLDDFLNEL 443 (476)
Q Consensus 417 ----~--------------~~~~~lRv~~~~~~T~edid~~~~~l 443 (476)
+ ...+.+|+++...+++++|+.|.++|
T Consensus 347 l~~~~~~~~~~~~~~~~~g~~~~~iRlSvg~e~~~~~i~~l~~al 391 (392)
T 3qhx_A 347 LIEHPSAMTHASTAGSQLEVPDDLVRLSVGIEDVADLLDDLKQAL 391 (392)
T ss_dssp EEECGGGTSCGGGBTTBCCCCTTEEEEECCSSCHHHHHHHHHHHH
T ss_pred eeeCcccccccccCHHHcCCCCCeEEEEeccCCHHHHHHHHHHHh
Confidence 0 01357999999988888888887766
No 143
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=99.88 E-value=1.8e-22 Score=207.63 Aligned_cols=298 Identities=12% Similarity=0.000 Sum_probs=192.2
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcc--cEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeC
Q 011842 136 HSRQFEVGVLDWFARLWELENNEY--WGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDC 213 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~--~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~ 213 (476)
+..++++++.+++.+..+...++. .+++|+|||+|+..++.......|++.|++++++|.++...++..|++++.+|+
T Consensus 93 g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~t~al~~~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~ 172 (420)
T 4f4e_A 93 GIAAYDASVQKLLLGDDSPLIAAGRVVTAQALGGTGALKIGADFLRTLNPKAKVAISDPSWENHRALFDMAGFEVVAYPY 172 (420)
T ss_dssp CCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHTTCCEEEEEC
T ss_pred CcHHHHHHHHHHhcCCCccccccCceEEEECCccHHHHHHHHHHHHHhCCCCEEEEeCCCcHhHHHHHHHcCCeEEEeee
Confidence 457889888888866444211122 589999999999988543322238999999999999999999999999999998
Q ss_pred --CCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccc---cCHHHHHHHHHHhCCCCCceEEEEecCcccccccccc-
Q 011842 214 --LISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAV---DDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVK- 287 (476)
Q Consensus 214 --~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~i---d~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~- 287 (476)
+.++.+|++.|++.|++.+.+..++++++++|+||.+ +++++|+++|++||+ ++++|++|+++.+....
T Consensus 173 ~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~-----~li~De~y~~~~~~~~~~ 247 (420)
T 4f4e_A 173 YDAKTNGVNFDGMLAALNGYEPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRL-----VPFLDIAYQGFGESIEAD 247 (420)
T ss_dssp EETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTC-----EEEEEESCTTSSSCTTGG
T ss_pred eccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCc-----EEEEccccccccCCcchh
Confidence 3468899999999998544444688888999999998 457799999999999 99999999876653111
Q ss_pred cCCC--CCCcccccEEEEcCCCCCC-CCCCceeEEe--e-hhhhhhhcCC-ccccCCCCCcccCCCCChhHHHHHHHHHH
Q 011842 288 KAPK--VSFKKPIGSVSVSGHKFVG-CPMPCGVQIT--R-MEHINVLSSN-VEYLASRDATIMGSRNGHAPIFLWYTLNR 360 (476)
Q Consensus 288 ~~~~--~~~~~~~Dsi~~s~hK~l~-~p~~~G~l~~--~-~~~~~~l~~~-~~yl~~~~~~~~~sr~~~~~l~~~~~l~~ 360 (476)
..+. +......+++..|++|.++ .++++|++++ + .+.++.+... ..+... + ..+.+..........+..
T Consensus 248 ~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~l~~ 323 (420)
T 4f4e_A 248 AAAVRLFAAANLNVFVSSSFSKSFSLYGERVGALSIITDSKDEAARVLSQLKRVIRT---N-YSNPPTHGGAIVAAVLAS 323 (420)
T ss_dssp GHHHHHHHHTTCCEEEEEECTTTTTCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHT---T-TSSCCSHHHHHHHHHHHC
T ss_pred hHHHHHHHhcCCCEEEEEeCCccCcCcCCCcEEEEEEcCCHHHHHHHHHHHHHHHhc---c-cCCCCHHHHHHHHHHhcC
Confidence 1000 1111124577889999998 6889999874 2 2333221100 000000 0 011111212222222221
Q ss_pred hC-----hhcHHHHHHHHHHHHHHHHHHHHhc----CCeEeecCCeeEEEEecCCcHHH---h--hceeecccCCEEEEE
Q 011842 361 KG-----YKGFQKEVQKCLRNAHYLKDRLLDA----GISAMLNELSSTVVFERPQDEEF---V--RRWQLACQGNIAHVV 426 (476)
Q Consensus 361 ~g-----~~g~~~~~~~~~~~a~~l~~~L~~~----g~~~~~~~~~~iv~f~~~~~~~~---~--~~~~l~~~~~~lRv~ 426 (476)
.. .+.+++..++..++++++.+.|++. ++... .+..+++.|..-+.+.+ . +++.+... .|++
T Consensus 324 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~l~~~gI~v~~~---~Ris 399 (420)
T 4f4e_A 324 PELRASWVQELGEMRDRIRAMRNGLVERLKAAGIERDFSFI-NAQRGMFSYSGLTSAQVDRLREEFGIYAVST---GRIC 399 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCTHH-HHSCSSEEECCCCHHHHHHHHHHHCEECCTT---SEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceeE-CCCccEEEEeCCCHHHHHHHHHhCCEEecCC---CeEE
Confidence 11 2346777888889999999999987 33322 33333333432222222 2 22333332 2888
Q ss_pred EcCCCCHHHHHHHHHHHHHHH
Q 011842 427 VMPNVTIDKLDDFLNELIENR 447 (476)
Q Consensus 427 ~~~~~T~edid~~~~~l~~~~ 447 (476)
+. ..|.++|++++++|+++.
T Consensus 400 ~~-~~~~~~i~~~~~~l~~~l 419 (420)
T 4f4e_A 400 VA-ALNTRNLDVVANAIAAVL 419 (420)
T ss_dssp GG-GCCTTTHHHHHHHHHHHH
T ss_pred Ee-cCCHHHHHHHHHHHHHHh
Confidence 75 347777999999998764
No 144
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.88 E-value=2.3e-21 Score=197.34 Aligned_cols=280 Identities=11% Similarity=0.030 Sum_probs=186.1
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCc-hHHHHHHHHcCCe----------
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESH-YSVFKAARMYRME---------- 207 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H-~S~~~~~~~~G~~---------- 207 (476)
+...++++++++++|.+. ..+++|+|||+|+..++.+++...+++.|++.+++| .++..+++..|.+
T Consensus 87 ~~~~~l~~~la~~~~~~~--~~v~~~~gg~~a~~~al~~~~~~~~~~~vi~~~~~y~~~~~~~~~~~g~~~~~~~~~p~~ 164 (395)
T 1vef_A 87 PMRGEFYRTLTAILPPEL--NRVFPVNSGTEANEAALKFARAHTGRKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLV 164 (395)
T ss_dssp HHHHHHHHHHHHTSCTTE--EEEEEESSHHHHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCS
T ss_pred HHHHHHHHHHHHhcCCCc--CEEEEcCcHHHHHHHHHHHHHHHhCCCeEEEEcCCcCCCchhhhhhcCCcccccccCCCC
Confidence 566778888899888753 358999999999999998875322666666666655 4566667777765
Q ss_pred --EEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC----HHHHHHHHHHhCCCCCceEEEEecCcccc
Q 011842 208 --CVKVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD----LDLVIQTLEESGFTQDRFYIHCDGALFGL 281 (476)
Q Consensus 208 --v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~----l~~I~~ia~~~g~~~~~~~lhvD~a~~g~ 281 (476)
+..++. .|+++|+++|+++ +.+|+++..++++|.+.| +++|+++|++||+ ++|+|++|+++
T Consensus 165 ~~~~~~~~-----~d~~~l~~~i~~~---~~~v~~~~~~~~tG~~~~~~~~l~~i~~l~~~~~~-----~li~Dea~~~~ 231 (395)
T 1vef_A 165 EPVEFIPY-----NDVEALKRAVDEE---TAAVILEPVQGEGGVRPATPEFLRAAREITQEKGA-----LLILDEIQTGM 231 (395)
T ss_dssp SCEEEECT-----TCHHHHHHHCCTT---EEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTC-----EEEEECTTTTT
T ss_pred CCeeEeCC-----CcHHHHHHHhccC---EEEEEEeCccCCCCccCCCHHHHHHHHHHHHHcCC-----EEEEEecccCC
Confidence 333443 4899999998743 347777766788999877 9999999999999 99999999853
Q ss_pred cccccccCCCCCCcc-cccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHH
Q 011842 282 MMPFVKKAPKVSFKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNR 360 (476)
Q Consensus 282 ~~~~~~~~~~~~~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~ 360 (476)
... .... .++... ..|++ +++|+++.|+++|++++++++++.+.... +. . ..+.+......+.++++.
T Consensus 232 ~~~-g~~~-~~~~~~~~~d~~--s~sK~~~~g~~~G~~~~~~~~~~~l~~~~-~~----~--~~~~~~~~~~a~~~al~~ 300 (395)
T 1vef_A 232 GRT-GKRF-AFEHFGIVPDIL--TLAKALGGGVPLGVAVMREEVARSMPKGG-HG----T--TFGGNPLAMAAGVAAIRY 300 (395)
T ss_dssp TTT-SSSS-THHHHTCCCSEE--EECGGGGTTSSCEEEEEEHHHHHTSCTTS-SC----C--SSTTCHHHHHHHHHHHHH
T ss_pred ccC-Cchh-HhhhcCCCCCEE--EEcccccCCCceEEEEehHHHHhhhccCC-cC----C--CcCCCHHHHHHHHHHHHH
Confidence 211 1110 011111 26766 45899988999999999988766553311 10 1 111111222223344443
Q ss_pred hChhcHHHHHHHHHHHHHHHHHHHHhcCCeE--eecCCeeEEEEecCC-cHHHh------hceeec-ccCCEEEEEEcCC
Q 011842 361 KGYKGFQKEVQKCLRNAHYLKDRLLDAGISA--MLNELSSTVVFERPQ-DEEFV------RRWQLA-CQGNIAHVVVMPN 430 (476)
Q Consensus 361 ~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~--~~~~~~~iv~f~~~~-~~~~~------~~~~l~-~~~~~lRv~~~~~ 430 (476)
+.. .+..++..++++++.+.|++.+... ..++..+++.+..+. ...+. +++.+. ...+.+|++++..
T Consensus 301 ~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~l~~~~gi~v~~~~~~~iRi~~~~~ 377 (395)
T 1vef_A 301 LER---TRLWERAAELGPWFMEKLRAIPSPKIREVRGMGLMVGLELKEKAAPYIARLEKEHRVLALQAGPTVIRFLPPLV 377 (395)
T ss_dssp HHH---HTTHHHHHHHHHHHHHHHHTSCCTTEEEEEEETTEEEEEESSCSHHHHHHHHHHHCEECEESSTTEEEECCCTT
T ss_pred HHh---CCHHHHHHHHHHHHHHHHHHhhcCceEEEEEEEEEEEEEEcChHHHHHHHHHHHCCeEEecCCCCEEEEeCCCC
Confidence 322 3467788889999999999876421 122334566666553 33332 233333 3357899999989
Q ss_pred CCHHHHHHHHHHHHHHH
Q 011842 431 VTIDKLDDFLNELIENR 447 (476)
Q Consensus 431 ~T~edid~~~~~l~~~~ 447 (476)
+|++++++++++|+++.
T Consensus 378 ~~~~~i~~~~~~l~~~l 394 (395)
T 1vef_A 378 IEKEDLERVVEAVRAVL 394 (395)
T ss_dssp CCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHh
Confidence 99999999999998764
No 145
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.88 E-value=7.4e-21 Score=194.21 Aligned_cols=285 Identities=13% Similarity=0.040 Sum_probs=190.9
Q ss_pred HHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCC-CCccC
Q 011842 142 VGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLI-SGEID 220 (476)
Q Consensus 142 ~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~-~g~~D 220 (476)
.++++.+++++|.+ ..+++++||+|+..++.+++ ..+++.|+++.++|.++..+++..|++++.+|.++ ++.+|
T Consensus 66 ~~l~~~la~~~~~~----~~v~~~~Gt~a~~~~l~~~~-~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d 140 (399)
T 2oga_A 66 EGFEAEFAAYCETD----HAVGVNSGMDALQLALRGLG-IGPGDEVIVPSHTYIASWLAVSATGATPVPVEPHEDHPTLD 140 (399)
T ss_dssp HHHHHHHHHHTTSS----EEEEESCHHHHHHHHHHHTT-CCTTCEEEEESSSCTHHHHHHHHTTCEEEEECBCSSSSSBC
T ss_pred HHHHHHHHHHHCCC----eEEEecCHHHHHHHHHHHhC-CCCcCEEEECCCccHHHHHHHHHCCCEEEEEecCCCCCCcC
Confidence 44556677788875 27889999999999988872 13889999999999999999999999999999986 57899
Q ss_pred HHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCcccccE
Q 011842 221 CADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKPIGS 300 (476)
Q Consensus 221 ~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~~Ds 300 (476)
+++|++++++++ .+|++ ++++|.+.|+++|.++|++||+ ++++|++|+.+....... + ....|+
T Consensus 141 ~~~l~~~i~~~~---~~v~~---~n~tG~~~~l~~i~~l~~~~~~-----~li~Dea~~~g~~~~~~~---~--~~~~di 204 (399)
T 2oga_A 141 PLLVEKAITPRT---RALLP---VHLYGHPADMDALRELADRHGL-----HIVEDAAQAHGARYRGRR---I--GAGSSV 204 (399)
T ss_dssp HHHHHHHCCTTE---EEECC---BCGGGCCCCHHHHHHHHHHHTC-----EECEECTTCTTCEETTEE---T--TCTTCE
T ss_pred HHHHHHhcCCCC---eEEEE---eCCcCCccCHHHHHHHHHHcCC-----EEEEECcccccCccCCee---c--ccccCE
Confidence 999999997543 35554 5678999999999999999999 999999998553321111 1 112588
Q ss_pred EEEcCC--CCCCCCCCceeEEee-hhhhhhhcCCccccCCC--CCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHHH
Q 011842 301 VSVSGH--KFVGCPMPCGVQITR-MEHINVLSSNVEYLASR--DATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLR 375 (476)
Q Consensus 301 i~~s~h--K~l~~p~~~G~l~~~-~~~~~~l~~~~~yl~~~--~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~ 375 (476)
+++|+| |+++.|.++|+++++ +++.+.+.....+-... .....+.......+.+++++..+ +.+++..++..+
T Consensus 205 ~~~S~~~sK~~~~~G~~g~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~g~~~~~~~~~~a~~~~~l--~~~~~~~~~~~~ 282 (399)
T 2oga_A 205 AAFSFYPGKNLGCFGDGGAVVTGDPELAERLRMLRNYGSRQKYSHETKGTNSRLDEMQAAVLRIRL--AHLDSWNGRRSA 282 (399)
T ss_dssp EEEECCTTSSSCCSSCCEEEEESCHHHHHHHHHHHBTTCSSTTCCCSCCCBCCCCHHHHHHHHHHH--HTHHHHHHHHHH
T ss_pred EEEeCCCCccCCcCCceEEEEeCCHHHHHHHHHHHhcCccccccccccccCCCcCHHHHHHHHHHH--HHHHHHHHHHHH
Confidence 899985 999863478888886 45544332111100000 00011111112345555544433 345667788888
Q ss_pred HHHHHHHHHHhc-CCeEeecC-CeeE----EEEecCCcHHHh-----hceeeccc-------------------------
Q 011842 376 NAHYLKDRLLDA-GISAMLNE-LSST----VVFERPQDEEFV-----RRWQLACQ------------------------- 419 (476)
Q Consensus 376 ~a~~l~~~L~~~-g~~~~~~~-~~~i----v~f~~~~~~~~~-----~~~~l~~~------------------------- 419 (476)
+++++.+.|++. ++.....+ ..+. +.+...+...+. +++.+...
T Consensus 283 ~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 362 (399)
T 2oga_A 283 LAAEYLSGLAGLPGIGLPVTAPDTDPVWHLFTVRTERRDELRSHLDARGIDTLTHYPVPVHLSPAYAGEAPPEGSLPRAE 362 (399)
T ss_dssp HHHHHHHHTTTCTTCBCCCCCTTEECCCSSEEEECSSHHHHHHHHHHTTBCCBCSCSSCGGGSHHHHTTSCCTTSCHHHH
T ss_pred HHHHHHHHhccCCCccccCCCCCCcceeEEEEEECCCHHHHHHHHHHCCCceecCCCCccccchhhcccCCCCCCChhHH
Confidence 999999999886 44332222 2221 222222323222 22222110
Q ss_pred ---CCEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Q 011842 420 ---GNIAHVVVMPNVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 420 ---~~~lRv~~~~~~T~edid~~~~~l~~~~~~ 449 (476)
.+.+|+++++.+|++||++++++|+++.++
T Consensus 363 ~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 395 (399)
T 2oga_A 363 SFARQVLSLPIGPHLERPQALRVIDAVREWAER 395 (399)
T ss_dssp HHHHHEEEECCSTTCCHHHHHHHHHHHHHHHHS
T ss_pred HHHhCEEEccCCCCCCHHHHHHHHHHHHHHHHH
Confidence 157999999999999999999999988754
No 146
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.88 E-value=1.4e-21 Score=199.43 Aligned_cols=285 Identities=10% Similarity=-0.009 Sum_probs=194.2
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEE-cCCchhHHHHHHHHHHhhCCCcEEEecCCCchH-HHHHHHHc--CCeEEEE
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYI-TNCGTEGNLHGILVGREVFPDGILYASRESHYS-VFKAARMY--RMECVKV 211 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~-t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S-~~~~~~~~--G~~v~~v 211 (476)
...++.+++++++++++|++. +..+++ |+|||+|+..++.++.. |+ +++++...|.. +...+... |++++.+
T Consensus 75 ~~~~~~~~~~~~la~~~g~~~-~~~i~~~t~g~t~al~~~~~~l~~--~g-v~~v~~~~~~~~~~~~~~~~~~g~~~~~v 150 (398)
T 2fyf_A 75 PVKNLVGRVRSGLAELFSLPD-GYEVILGNGGATAFWDAAAFGLID--KR-SLHLTYGEFSAKFASAVSKNPFVGEPIII 150 (398)
T ss_dssp HHHHHHHHHHHHHHHHTTCCT-TCEEEEEETCHHHHHHHHHHHTCS--SC-EEEEECSHHHHHHHHHHHHCTTSCCCEEE
T ss_pred HHHHHHHHHHHHHHHHhCCCC-CceEEEeCCchhHHHHHHHHHhcC--CC-eEEEeCCHHHHHHHHHHHHhCCCCceEEE
Confidence 345678889999999999973 235888 99999999999888754 65 33344545532 23345666 8889999
Q ss_pred eCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCC
Q 011842 212 DCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPK 291 (476)
Q Consensus 212 ~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~ 291 (476)
+.+ ++.++... +.++ +.+|++++++|++|.+.|+++|.++ +|+ |+|+|++|+.+..+
T Consensus 151 ~~~-~g~~~~~~----i~~~---~~~v~~~~~~nptG~~~~~~~i~~~---~~~-----~vivD~a~~~~~~~------- 207 (398)
T 2fyf_A 151 TSD-PGSAPEPQ----TDPS---VDVIAWAHNETSTGVAVAVRRPEGS---DDA-----LVVIDATSGAGGLP------- 207 (398)
T ss_dssp ECC-TTCCCCCC----CCTT---CSEEEEESEETTTTEECCCCCCTTC---C-C-----EEEEECTTTTTTSC-------
T ss_pred ecC-CCCCCCcc----ccCC---CCEEEEeCcCCCcceecchHHhhhh---cCC-----eEEEEeccccCCcc-------
Confidence 987 44332211 3333 3488888899999999999999887 899 99999999865543
Q ss_pred CCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcC-------CccccCCC-------CCcccCCCCChhHHHHHHH
Q 011842 292 VSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSS-------NVEYLASR-------DATIMGSRNGHAPIFLWYT 357 (476)
Q Consensus 292 ~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~-------~~~yl~~~-------~~~~~~sr~~~~~l~~~~~ 357 (476)
++.. .+|+++.++||+++.|.++|++++++++++.+.. ...|+... .....++.+.....++.++
T Consensus 208 ~~~~-~~di~~~s~sK~~~~~gg~g~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~a 286 (398)
T 2fyf_A 208 VDIA-ETDAYYFAPQKNFASDGGLWLAIMSPAALSRIEAIAATGRWVPDFLSLPIAVENSLKNQTYNTPAIATLALLAEQ 286 (398)
T ss_dssp CCGG-GCSEEEECTTSTTCSCSSEEEEEECHHHHHHHHHHHHTTCCCCGGGCHHHHHHHHTTTCCSSCCCHHHHHHHHHH
T ss_pred cCcc-cCcEEEEecCcccCCCCceEEEEECHHHHHHhhcccccCCCCCcEEehHHHhhhcccCCCCCCCCHHHHHHHHHH
Confidence 2222 2799999999999987679999999887655421 12232210 0011233332333455566
Q ss_pred HHHhChhc-HHHHHHHHHHHHHHHHHHHHhc-CCeEee-cC--Cee-EEEEecCC---cHHHhh-----ceeecc-----
Q 011842 358 LNRKGYKG-FQKEVQKCLRNAHYLKDRLLDA-GISAML-NE--LSS-TVVFERPQ---DEEFVR-----RWQLAC----- 418 (476)
Q Consensus 358 l~~~g~~g-~~~~~~~~~~~a~~l~~~L~~~-g~~~~~-~~--~~~-iv~f~~~~---~~~~~~-----~~~l~~----- 418 (476)
++.+...+ ++++.++..++++++.+.|++. |+.... .+ .++ ++.|..+. ..++.+ +..+..
T Consensus 287 l~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~ 366 (398)
T 2fyf_A 287 IDWLVGNGGLDWAVKRTADSSQRLYSWAQERPYTTPFVTDPGLRSQVVGTIDFVDDVDAGTVAKILRANGIVDTEPYRKL 366 (398)
T ss_dssp HHHHHHHTSHHHHHHHHHHHHHHHHHHHHHSTTEEESCCSGGGBCSSEEEEEECTTSCHHHHHHHHHHTTCBCCSCCTTT
T ss_pred HHHHHHccCHHHHHHHHHHHHHHHHHHHHHcCCceeccCChhhcCCcEEEEECCCCCCHHHHHHHHHHCCcEEecCcccC
Confidence 66655555 8899999999999999999998 444332 13 245 77777652 233322 233321
Q ss_pred cCCEEEEEEcCCCCHHHHHHHHHHHHHHHH
Q 011842 419 QGNIAHVVVMPNVTIDKLDDFLNELIENRS 448 (476)
Q Consensus 419 ~~~~lRv~~~~~~T~edid~~~~~l~~~~~ 448 (476)
.++.+|++++..+|++|+++++++|+++.+
T Consensus 367 ~~~~iRis~~~~~t~e~i~~~~~~l~~~l~ 396 (398)
T 2fyf_A 367 GRNQLRVAMFPAVEPDDVSALTECVDWVVE 396 (398)
T ss_dssp CSSEEEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEecCCCCHHHHHHHHHHHHHHHH
Confidence 146899999999999999999999998764
No 147
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=99.88 E-value=1.6e-21 Score=199.56 Aligned_cols=293 Identities=9% Similarity=-0.074 Sum_probs=189.9
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCc-----EEEec-CCCchHHHHHHHHc-----
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDG-----ILYAS-RESHYSVFKAARMY----- 204 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~-----~Vl~s-~~~H~S~~~~~~~~----- 204 (476)
+..++++++.+++.+.+|++.+...+++|+|+|+|+..++.++.. +++ .|+++ .++|..+...+...
T Consensus 76 g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~~--~gd~~~~~~vi~~~~p~~~~~~~~~~~~~~~~~ 153 (417)
T 3g7q_A 76 GKTALLNALAVLLRETLGWDIEPQNIALTNGSQSAFFYLFNLFAG--RRADGSTKKVLFPLAPEYIGYADSGLEDDLFVS 153 (417)
T ss_dssp SHHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSB--C----CCBEEEESSCCCHHHHHC-----CCEEE
T ss_pred CcHHHHHHHHHHHHHHhCCCCCcccEEEeCCcHHHHHHHHHHHcC--CCccCCcceEEEeCCCccccchhhccchhhhcc
Confidence 567999999999988888775556799999999999999988865 655 88887 88888877655322
Q ss_pred -CCeEEEEeCCC-CCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCcc
Q 011842 205 -RMECVKVDCLI-SGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALF 279 (476)
Q Consensus 205 -G~~v~~v~~~~-~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~ 279 (476)
+..+..++.+. ++.+|+++|+ +.+ ++.+|++++++|++|.+.| +++|+++|++||+ ++++|++|+
T Consensus 154 ~~~~~~~~~~~~~~~~~d~~~l~--~~~---~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~-----~li~De~~~ 223 (417)
T 3g7q_A 154 ARPNIELLPEGQFKYHVDFEHLH--IGE---ETGMICVSRPTNPTGNVITDEELMKLDRLANQHNI-----PLVIDNAYG 223 (417)
T ss_dssp CCCEEEEEGGGEEEEECCGGGCC--CCT---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTC-----CEEEECTTC
T ss_pred ccCcccccCCcccccccCHHHhc--ccc---CceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCC-----EEEEeCCCc
Confidence 22344444331 3468999887 433 3458888899999999988 9999999999999 999999997
Q ss_pred cccccccccCCCCCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHH
Q 011842 280 GLMMPFVKKAPKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLN 359 (476)
Q Consensus 280 g~~~~~~~~~~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~ 359 (476)
.+.. ..............+++..+++|+++.++++|+++.++++++.+.....+. ..+.+ .+.+.++..
T Consensus 224 ~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~~~~~~~~~~~~~~~-------~~~~~---~~~~~~~~~ 292 (417)
T 3g7q_A 224 VPFP-GIIFSEARPLWNPNIILCMSLSKLGLPGSRCGIIIANDKTITAIANMNGII-------SLAPG---GMGPAMMCE 292 (417)
T ss_dssp TTTT-CCBCSCCCCCCCTTEEEEEESGGGTCTTSCCEEEECCHHHHHHHHHHHHHH-------CCCCC---SHHHHHHHH
T ss_pred cccc-cccccccccCCCCCEEEEEechhccCCCcceEEEEeCHHHHHHHHHhhcce-------eeCCC---cHHHHHHHH
Confidence 5321 111110001112357788899999888899999999888766553221111 11111 122333333
Q ss_pred HhChhcHH----H-HHHHHHHHHHHHHHHHHhc----CCeEeecCCeeEEEEecCC----cHHHhh-----ceeec----
Q 011842 360 RKGYKGFQ----K-EVQKCLRNAHYLKDRLLDA----GISAMLNELSSTVVFERPQ----DEEFVR-----RWQLA---- 417 (476)
Q Consensus 360 ~~g~~g~~----~-~~~~~~~~a~~l~~~L~~~----g~~~~~~~~~~iv~f~~~~----~~~~~~-----~~~l~---- 417 (476)
.+....+. + ..++..++++++.+.|++. ++....+.....+.+..+. ..++.+ +..+.
T Consensus 293 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~ 372 (417)
T 3g7q_A 293 MIKRNDLLRLSETVIKPFYYQRVQQTIAIIRRYLSEERCLIHKPEGAIFLWLWFKDLPITTELLYQRLKARGVLMVPGHY 372 (417)
T ss_dssp HHHTTCHHHHHHHTHHHHHHHHHHHHHHHHHHHCCTTTCEEECCCBSSEEEEECTTCSSCHHHHHHHHHHTTEECEEGGG
T ss_pred HHcCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeeCCCcceEEEEEcCCCCCCHHHHHHHHHHCCEEEECchh
Confidence 22222222 2 4455667777788888763 3443334445566665543 223322 23221
Q ss_pred c--c--------CCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhc
Q 011842 418 C--Q--------GNIAHVVVMPNVTIDKLDDFLNELIENRSTWYED 453 (476)
Q Consensus 418 ~--~--------~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~~~ 453 (476)
+ . .+.+|+++.. |+++|+++++.|.++.+++.++
T Consensus 373 f~~~~~~~~~~~~~~iRis~~~--~~~~i~~~~~~l~~~l~~~~~~ 416 (417)
T 3g7q_A 373 FFPGLDKPWPHTHQCMRMNYVP--EPDKIEAGVKILAEEIERAWRE 416 (417)
T ss_dssp GCTTBSSCCGGGGGEEEEESCS--CHHHHHHHHHHHHHHHHHHHHH
T ss_pred hCCCCccccccCCCeEEEEecC--CHHHHHHHHHHHHHHHHHHHhc
Confidence 1 1 3589998874 9999999999999999887764
No 148
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=99.88 E-value=5.6e-22 Score=202.23 Aligned_cols=295 Identities=9% Similarity=-0.024 Sum_probs=193.2
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEE--cCCchhHHHHHHHHHHhh-CCCcEEEecCCCchHHHHHHHHcCCeEEEEe
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYI--TNCGTEGNLHGILVGREV-FPDGILYASRESHYSVFKAARMYRMECVKVD 212 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~--t~ggt~An~~al~aa~~~-~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~ 212 (476)
+..++++++.+++.+..|.+.++.++++ |+|||+|+..++.+++.. .|++.|++++++|.++...++..|++++.+|
T Consensus 72 g~~~lr~~ia~~~~~~~~~~~~~~~i~~v~t~G~~~al~~~~~~l~~~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~~~ 151 (401)
T 7aat_A 72 GLADFTRASAELALGENSEAFKSGRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQAYR 151 (401)
T ss_dssp CCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTHHHHHHHTTCEEEEEE
T ss_pred CCHHHHHHHHHHhcCCCccccccCceEEEecCcchHHHHHHHHHHHHhccCCCEEEEcCCCchhHHHHHHHcCCeeEeee
Confidence 4568899988888766664322234766 999999999888766521 3899999999999999999999999999999
Q ss_pred CC--CCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccc---cCHHHHHHHHHHhCCCCCceEEEEecCcccccccccc
Q 011842 213 CL--ISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAV---DDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVK 287 (476)
Q Consensus 213 ~~--~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~i---d~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~ 287 (476)
++ .++.+|++.+++.+++.+.+..++++++++|+||.+ +++++|+++|++||+ ++++|++|..+......
T Consensus 152 ~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~-----~li~Deay~~~~~~~~~ 226 (401)
T 7aat_A 152 YYDPKTCSLDFTGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNL-----LAYFDMAYQGFASGDIN 226 (401)
T ss_dssp CEETTTTEECHHHHHHHHTTSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTC-----EEEEEESCTTTTTSCHH
T ss_pred eeccccCccCHHHHHHHHHhCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCc-----EEEEccccccccCCCcc
Confidence 85 368999999999987644445688888999999965 558899999999999 99999999766542110
Q ss_pred c-CCCCC---CcccccEEEEcCCCCCC-CCCCceeEEe---ehhh----hhhhcCCccccCCCCCcccCCCCChhHHHHH
Q 011842 288 K-APKVS---FKKPIGSVSVSGHKFVG-CPMPCGVQIT---RMEH----INVLSSNVEYLASRDATIMGSRNGHAPIFLW 355 (476)
Q Consensus 288 ~-~~~~~---~~~~~Dsi~~s~hK~l~-~p~~~G~l~~---~~~~----~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~ 355 (476)
. ...+. ....-.+++.|++|.++ .++++|++++ +.+. ...+....... ..+.+ .+.+.
T Consensus 227 ~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~RiG~l~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~---~~~~~ 296 (401)
T 7aat_A 227 RDAWALRHFIEQGIDVVLSQSYAKNMGLYGERAGAFTVICRDAEEAKRVESQLKILIRPM-------YSNPP---MNGAR 296 (401)
T ss_dssp HHTHHHHHHHHTTCCCEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHHH-------HSSCC---HHHHH
T ss_pred ccHHHHHHHHhcCCcEEEEecCCcccccccCceEEEEEEeCCHHHHHHHHHHHHHHHHhc-------cCCCC---hHHHH
Confidence 0 00000 01113567889999986 6788999987 2222 12221100000 01111 23333
Q ss_pred HHHHHhC--------hhcHHHHHHHHHHHHHHHHHHHHhcCC---eEeecCCeeEEEEecCCcHHH---hhceeecccCC
Q 011842 356 YTLNRKG--------YKGFQKEVQKCLRNAHYLKDRLLDAGI---SAMLNELSSTVVFERPQDEEF---VRRWQLACQGN 421 (476)
Q Consensus 356 ~~l~~~g--------~~g~~~~~~~~~~~a~~l~~~L~~~g~---~~~~~~~~~iv~f~~~~~~~~---~~~~~l~~~~~ 421 (476)
++...+. .+.+++..++..+++++|.+.|++.+. ....++..+++.|..-..+.+ .++..+... .
T Consensus 297 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~-~ 375 (401)
T 7aat_A 297 IASLILNTPELRKEWLVEVKGMADRIISMRTQLVSNLKKEGSSHNWQHITDQIGMFCFTGLKPEQVERLTKEFSIYMT-K 375 (401)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHHHHCCSSEEECCCCHHHHHHHHHHHCEECC-T
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCceecCCcceEEecCCCHHHHHHHHHhCCEecc-C
Confidence 3322221 233566778888899999999998752 122233444444432222221 122222222 2
Q ss_pred EEEEEEcCCCCHHHHHHHHHHHHHHH
Q 011842 422 IAHVVVMPNVTIDKLDDFLNELIENR 447 (476)
Q Consensus 422 ~lRv~~~~~~T~edid~~~~~l~~~~ 447 (476)
.+|++++..++++ |++++++|+++.
T Consensus 376 ~~Ris~~~~~~~~-i~~~~~~l~~~~ 400 (401)
T 7aat_A 376 DGRISVAGVASSN-VGYLAHAIHQVT 400 (401)
T ss_dssp TCEEEGGGCCTTT-HHHHHHHHHHHH
T ss_pred CCeEEeccCChhh-HHHHHHHHHHHh
Confidence 3699988655555 999999998764
No 149
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.88 E-value=3.5e-20 Score=189.49 Aligned_cols=289 Identities=13% Similarity=0.058 Sum_probs=187.8
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHH---HHHHcC--CeEEE
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFK---AARMYR--MECVK 210 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~---~~~~~G--~~v~~ 210 (476)
...++++.+++++++++|.+++ +. ++++||+|+..++.++.. ||+.|+++.++|.++.. .....| +.++.
T Consensus 68 ~~~~~~~~~~~~la~~~g~~~~--~i-~~~sGt~a~~~~~~~~~~--~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~ 142 (417)
T 3n0l_A 68 FVDEIETLAIERCKKLFNCKFA--NV-QPNSGSQANQGVYAALIN--PGDKILGMDLSHGGHLTHGAKVSSSGKMYESCF 142 (417)
T ss_dssp HHHHHHHHHHHHHHHHHTCSEE--EC-CCSSHHHHHHHHHHHHSC--TTCEEEEECC----------------CCSEEEE
T ss_pred HHHHHHHHHHHHHHHHhCCCCc--ce-EeccHHHHHHHHHHHhcC--CCCEEEecccccccccchhhhhhhhcceeeeEe
Confidence 3468888889999999998642 24 445559999999888855 89999999999987654 333444 45666
Q ss_pred EeCCCCCccCHHHHHHHHH-cCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccC
Q 011842 211 VDCLISGEIDCADFKAKLL-QNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKA 289 (476)
Q Consensus 211 v~~~~~g~~D~~~Le~~l~-~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~ 289 (476)
++++.++.+|+++|++++. .+++ +|++++++ .|.+.|+++|.++|++||+ ++++|++|+.+........
T Consensus 143 ~~~~~~~~~d~~~l~~~i~~~~~~---~v~~~~~~--~G~~~~l~~i~~l~~~~~~-----~li~Dea~~~g~~~~~~~~ 212 (417)
T 3n0l_A 143 YGVELDGRIDYEKVREIAKKEKPK---LIVCGASA--YARVIDFAKFREIADEIGA-----YLFADIAHIAGLVVAGEHP 212 (417)
T ss_dssp ECCCTTSSCCHHHHHHHHHHHCCS---EEEECCSS--CCSCCCHHHHHHHHHHHTC-----EEEEECTTTHHHHHTTSSC
T ss_pred ccCCCCCCcCHHHHHHHHHhcCCe---EEEECCcc--cCccCCHHHHHHHHHHcCC-----EEEEECccchhhhhcccCC
Confidence 7777778899999999998 4554 66676655 3999999999999999999 9999999864433211111
Q ss_pred CCCCCcccccEEEEcCCCCCCCCCCceeEEee-hhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHH
Q 011842 290 PKVSFKKPIGSVSVSGHKFVGCPMPCGVQITR-MEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQK 368 (476)
Q Consensus 290 ~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~-~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~ 368 (476)
..+ ..+|+++.++||++.+ ++.|+++++ +++.+.+...... ...++.......++++++.....+++++
T Consensus 213 ~~~---~~~di~~~s~sK~l~g-~~~G~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~aa~~~a~~~~~~~~~~~ 282 (417)
T 3n0l_A 213 SPF---PYAHVVSSTTHKTLRG-PRGGIIMTNDEELAKKINSAIFP------GIQGGPLMHVIAAKAVGFKFNLSDEWKV 282 (417)
T ss_dssp CCT---TTCSEEEEESSTTTCS-CSCEEEEESCHHHHHHHHHHHTT------TTCSSCCHHHHHHHHHHHHHHTSHHHHH
T ss_pred Ccc---ccceEEEeeCccccCC-CCeeEEEECCHHHHHHHhhhhCC------cccCCcHHHHHHHHHHHHHHHHhhhHHH
Confidence 111 1379999999999965 457999998 4555544221100 1122222222334445555544567788
Q ss_pred HHHHHHHHHHHHHHHHHhcCCeEeec-CCeeEEEEecCC----cHHHh-----hceeec-----------ccCCEEEEEE
Q 011842 369 EVQKCLRNAHYLKDRLLDAGISAMLN-ELSSTVVFERPQ----DEEFV-----RRWQLA-----------CQGNIAHVVV 427 (476)
Q Consensus 369 ~~~~~~~~a~~l~~~L~~~g~~~~~~-~~~~iv~f~~~~----~~~~~-----~~~~l~-----------~~~~~lRv~~ 427 (476)
+.++..++++++.+.|++.|+..... ...+++.+..+. ...+. +++.+. .....+|+++
T Consensus 283 ~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~~ri~~ 362 (417)
T 3n0l_A 283 YAKQVRTNAQVLANVLMDRKFKLVSDGTDNHLVLMSFLDREFSGKDADLALGNAGITANKNTVPGEIRSPFITSGLRLGT 362 (417)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECTTSSSCHHHHHHHHHHTTEECEECCCTTCCSCTTTCSEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHhCCceeccCCCCceEEEEEcccCCCCHHHHHHHHHHcCeEEeccccCCCCcccCCCCeeEecC
Confidence 99999999999999999977654432 234555555431 12221 133221 1125688875
Q ss_pred c----CCCCHHHHHHHHHHHHHHHHH
Q 011842 428 M----PNVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 428 ~----~~~T~edid~~~~~l~~~~~~ 449 (476)
. ...|+++|+++++.|.++.+.
T Consensus 363 ~~~~~~~~~~~~i~~~~~~l~~~l~~ 388 (417)
T 3n0l_A 363 PALTARGFKEKEMEIVSNYIADILDD 388 (417)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHHHHHT
T ss_pred HHHhhCCCCHHHHHHHHHHHHHHHhc
Confidence 4 346899999999999888653
No 150
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.88 E-value=1.4e-20 Score=191.16 Aligned_cols=283 Identities=13% Similarity=0.055 Sum_probs=186.6
Q ss_pred HHHHH-HHHcCCCCCcccEEEcCCchhHHHHHHHHH-HhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCC-CCCccC
Q 011842 144 VLDWF-ARLWELENNEYWGYITNCGTEGNLHGILVG-REVFPDGILYASRESHYSVFKAARMYRMECVKVDCL-ISGEID 220 (476)
Q Consensus 144 ~~~~l-a~l~g~~~~~~~g~~t~ggt~An~~al~aa-~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~-~~g~~D 220 (476)
+++.+ ++++|.. . ..++|+|||+|+..++.++ .. ||+.|+++.++|.++..+++..|++++.++++ .++.+|
T Consensus 41 l~~~~~a~~~g~~-~--~~v~~~sgt~al~~al~~l~~~--~Gd~Vi~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~d 115 (377)
T 3ju7_A 41 FEQTIMSGFFQNR-G--AVTTVANATLGLMAAIQLKKRK--KGKYALMPSFTFPATPLAAIWCGLEPYFIDISIDDWYMD 115 (377)
T ss_dssp HHHHHHHHTSTTC-S--EEEEESCHHHHHHHHHHHHSCT--TCCEEEEESSSCTHHHHHHHHTTCEEEEECBCTTTCSBC
T ss_pred HHHHHHHHHhCCC-C--eEEEeCCHHHHHHHHHHHcCCC--CcCEEEECCCCcHHHHHHHHHcCCEEEEEecCCccCCcC
Confidence 34446 7778822 1 3899999999999998876 44 99999999999999999999999999999998 568999
Q ss_pred HHHHHHHH-HcC--CCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCC-cc
Q 011842 221 CADFKAKL-LQN--KDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSF-KK 296 (476)
Q Consensus 221 ~~~Le~~l-~~~--~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~-~~ 296 (476)
+++|++++ +++ ++ +|+ +++++|.+.|+++|.++|+ ||+ ++|+|++|+.+....... +.. ..
T Consensus 116 ~~~l~~~i~~~~~~tk---~v~---~~~~~G~~~~~~~i~~la~-~~~-----~vi~D~a~a~g~~~~~~~---~g~~~~ 180 (377)
T 3ju7_A 116 KTVLWDKIEELKEEVA---IVV---PYATFGSWMNLEEYEELEK-KGV-----PVVVDAAPGFGLMNGGMH---YGQDFS 180 (377)
T ss_dssp HHHHHHHHHHHGGGEE---EEC---CBCGGGBCCCCHHHHHHHH-TTC-----CBEEECTTCTTCEETTEE---TTTTCS
T ss_pred HHHHHHHHhcCCCCce---EEE---EECCCCCccCHHHHHHHHh-cCC-----EEEEECCCccCCeECCEe---ccCCCC
Confidence 99999998 554 43 554 4557899999999999999 999 999999997543321111 100 01
Q ss_pred cccEEEEcCCCCCCCCCCceeEEeehh-hhhhhcCCccccCC--CCCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHH
Q 011842 297 PIGSVSVSGHKFVGCPMPCGVQITRME-HINVLSSNVEYLAS--RDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKC 373 (476)
Q Consensus 297 ~~Dsi~~s~hK~l~~p~~~G~l~~~~~-~~~~l~~~~~yl~~--~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~ 373 (476)
.++++++++||++++ ...|+++++++ +.+.+.....+-.. ......+.+.....+..+..+.. .+.+.++.++.
T Consensus 181 d~~~~S~~~~K~l~~-g~gG~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~--l~~l~~~~~~~ 257 (377)
T 3ju7_A 181 GMIIYSFHATKPFGI-GEGGLIYSKNEEDIQRIKRMGNFGFDTNRECTMMGFNCKMSEYAAAIGIAT--MKKWDDKLKER 257 (377)
T ss_dssp SEEEEECBTTSSSCC-BSCEEEEESCHHHHHHHHHHTBTTBCTTSCBCSSCCBCCCCHHHHHHHHHH--HHTHHHHHHHH
T ss_pred cEEEEECCCCCcCCC-CCcEEEEECCHHHHHHHHHHHhcCCCCCCceeeccccCCCCHHHHHHHHHH--HHHHHHHHHHH
Confidence 256677778999997 46777777654 33332211111000 00111222222334544444443 36778889999
Q ss_pred HHHHHHHHHHHHhcCCe--EeecCC-----eeEEEEecCC---cHHHhhce-----e------ecc--------------
Q 011842 374 LRNAHYLKDRLLDAGIS--AMLNEL-----SSTVVFERPQ---DEEFVRRW-----Q------LAC-------------- 418 (476)
Q Consensus 374 ~~~a~~l~~~L~~~g~~--~~~~~~-----~~iv~f~~~~---~~~~~~~~-----~------l~~-------------- 418 (476)
.++++++.+.|++.+.. .+.++. ..++.+..++ .+++.+.+ . .++
T Consensus 258 ~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~ 337 (377)
T 3ju7_A 258 TRISEWYKQLLQSNGLMKKGWQLQKTEAVIQQFMPILCPEEVRNKQVIEDLKKQKIEARLYFSPSCHQQVLFRNYKSTDL 337 (377)
T ss_dssp HHHHHHHHHHHHHTTTTTTTCBCCCCSCBCCSSEEEECCTTSCHHHHHHHHHTTTBCCBCTTSSCGGGSGGGTTSCBSCC
T ss_pred HHHHHHHHHHhcCCCCccccccCCCCCcceEEEEEEEeCChhhHHHHHHHHHHCCCceecccCCccccchhhhcCCCCCC
Confidence 99999999999987631 111111 1233455443 23332111 1 111
Q ss_pred ------cCCEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Q 011842 419 ------QGNIAHVVVMPNVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 419 ------~~~~lRv~~~~~~T~edid~~~~~l~~~~~~ 449 (476)
....+|+.+++.+|++|++++++.|+++...
T Consensus 338 p~~~~~~~~~l~lp~~~~~t~~di~~v~~~l~~~~~~ 374 (377)
T 3ju7_A 338 TRTNKIAKRIVSLPLWEGMTKEIVEQIVICLGQKVVS 374 (377)
T ss_dssp HHHHHHHHHEEEECCCTTCCHHHHHHHHHHHTC----
T ss_pred HHHHHHHhCEEECCCCCCCCHHHHHHHHHHHHHHHhc
Confidence 0257899999999999999999999877643
No 151
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.88 E-value=3e-20 Score=188.87 Aligned_cols=270 Identities=15% Similarity=0.088 Sum_probs=191.0
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHH----HHHcCCeEEEEeCC
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKA----ARMYRMECVKVDCL 214 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~----~~~~G~~v~~v~~~ 214 (476)
....++++.+++++|.+ + .+++++||+|+..++.++.. +++.|+++.++|.+.... ++..|++++.++.+
T Consensus 52 ~~~~~l~~~la~~~~~~-~---~i~~~sGt~a~~~~~~~~~~--~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 125 (386)
T 1cs1_A 52 PTRDVVQRALAELEGGA-G---AVLTNTGMSAIHLVTTVFLK--PGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQG 125 (386)
T ss_dssp HHHHHHHHHHHHHHTCS-E---EEEESSHHHHHHHHHHHHCC--TTCEEEEETTCCHHHHHHHHHHHTTTSCEEEEECTT
T ss_pred ccHHHHHHHHHHHhCCC-c---EEEeCCHHHHHHHHHHHHhC--CCCEEEEecCCcHhHHHHHHHHHHhcCCEEEEeCCC
Confidence 44456667778888876 2 45556669999999888754 889999999999985543 46679999999875
Q ss_pred CCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCC
Q 011842 215 ISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSF 294 (476)
Q Consensus 215 ~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~ 294 (476)
|+++|+++++++++ +|+++++++++|.+.|+++|.++|++||+ ++++|++|+++.... . +
T Consensus 126 -----d~~~l~~~i~~~~~---~v~~~~~~nptG~~~~l~~i~~l~~~~~~-----~li~De~~~~~~~~~--~---~-- 185 (386)
T 1cs1_A 126 -----DEQALRAALAEKPK---LVLVESPSNPLLRVVDIAKICHLAREVGA-----VSVVDNTFLSPALQN--P---L-- 185 (386)
T ss_dssp -----CHHHHHHHHHTCCS---EEEEECSCTTTCCCCCHHHHHHHHHHTTC-----EEEEECTTTCTTTCC--G---G--
T ss_pred -----CHHHHHHhhccCCc---EEEEeCCCCCCCcccCHHHHHHHHHHcCC-----EEEEECCCcccccCC--c---c--
Confidence 89999999987654 78888999999999999999999999999 999999998765431 0 1
Q ss_pred cccccEEEEcCCCCCCCCCCc--eeEEeeh-hhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHH
Q 011842 295 KKPIGSVSVSGHKFVGCPMPC--GVQITRM-EHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQ 371 (476)
Q Consensus 295 ~~~~Dsi~~s~hK~l~~p~~~--G~l~~~~-~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~ 371 (476)
...+|+++.++||+++.|.+. |++++++ ++.+.+....... .++ ...+.++++++.+ +.+.++.+
T Consensus 186 ~~~~di~~~s~sK~~~~~~~~~~G~~~~~~~~l~~~l~~~~~~~-------~~~---~~~~~~~~~~~~l--~~~~~~~~ 253 (386)
T 1cs1_A 186 ALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNI-------GVT---GGAFDSYLLLRGL--RTLVPRME 253 (386)
T ss_dssp GGTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHH-------TCB---CCHHHHHHHHHHH--TTHHHHHH
T ss_pred ccCceEEEEcCcccccCCCCceeEEEEeCcHHHHHHHHHHHHhc-------CCC---CCHHHHHHHHhcc--cHHHHHHH
Confidence 123799999999999877653 9999987 5655543211110 111 1234455544433 34667777
Q ss_pred HHHHHHHHHHHHHHhcCCeE-e-ec----------------CCeeEEEEecCCc-HHH---hh--ceeecc---------
Q 011842 372 KCLRNAHYLKDRLLDAGISA-M-LN----------------ELSSTVVFERPQD-EEF---VR--RWQLAC--------- 418 (476)
Q Consensus 372 ~~~~~a~~l~~~L~~~g~~~-~-~~----------------~~~~iv~f~~~~~-~~~---~~--~~~l~~--------- 418 (476)
+..++++++.+.|++.+... . .+ ...+++.|..++. +.+ .+ ++.+..
T Consensus 254 ~~~~~~~~l~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~g~~~sl 333 (386)
T 1cs1_A 254 LAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGDEQTLRRFLGGLSLFTLAESLGGVESL 333 (386)
T ss_dssp HHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESSCHHHHHHHHHTCSSSEEBSCCCSSSCE
T ss_pred HHHHHHHHHHHHHhcCCCeEEEECCCCCCCccHHHHHHhcCCCceEEEEEECCCHHHHHHHHHhCCcceEcccCCCccee
Confidence 88888999999998865321 1 11 1256777776532 222 11 111210
Q ss_pred ----------------------cCCEEEEEEcCCCCHHHHHHHHHHHHHH
Q 011842 419 ----------------------QGNIAHVVVMPNVTIDKLDDFLNELIEN 446 (476)
Q Consensus 419 ----------------------~~~~lRv~~~~~~T~edid~~~~~l~~~ 446 (476)
..+.+|+++...+++++|+.|.++|+++
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~~~~~~~i~~l~~al~~~ 383 (386)
T 1cs1_A 334 ISHAATMTHAGMAPEARAAAGISETLLRISTGIEDGEDLIADLENGFRAA 383 (386)
T ss_dssp EEEGGGTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred eecccccccccCCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHHh
Confidence 1378999999999999999999988765
No 152
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.87 E-value=3.2e-21 Score=198.23 Aligned_cols=269 Identities=13% Similarity=0.097 Sum_probs=193.0
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHH----HHcCCeEEEEeCC
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAA----RMYRMECVKVDCL 214 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~----~~~G~~v~~v~~~ 214 (476)
...+++++.+++++|.+. .++++||++|+..++.+... ||+.|+++.+.|.+....+ +..|++++.++.+
T Consensus 82 p~~~~le~~lA~l~g~~~----~i~~ssGt~Ai~~al~~l~~--~Gd~Vi~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~ 155 (415)
T 2fq6_A 82 LTHFSLQQAMCELEGGAG----CVLFPCGAAAVANSILAFIE--QGDHVLMTNTAYEPSQDFCSKILSKLGVTTSWFDPL 155 (415)
T ss_dssp HHHHHHHHHHHHHHTCSE----EEEESSHHHHHHHHHHTTCC--TTCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECTT
T ss_pred chHHHHHHHHHHHhCCCe----EEEeCCHHHHHHHHHHHHhC--CCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEECCC
Confidence 455567777888888752 67789999999998887654 8999999999998876554 4569999999875
Q ss_pred CCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHH--hCCCCCceEEEEecCcccccccccccCCCC
Q 011842 215 ISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEE--SGFTQDRFYIHCDGALFGLMMPFVKKAPKV 292 (476)
Q Consensus 215 ~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~--~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~ 292 (476)
|+++|+++|++++ .+|++.+++|++|.+.|+++|+++|++ ||+ ++|+|++|+.++.. . + +
T Consensus 156 -----d~~~le~ai~~~t---klV~~e~~~NptG~v~dl~~I~~la~~~~~g~-----~livD~a~a~~~~~--~--p-~ 217 (415)
T 2fq6_A 156 -----IGADIVKHLQPNT---KIVFLESPGSITMEVHDVPAIVAAVRSVVPDA-----IIMIDNTWAAGVLF--K--A-L 217 (415)
T ss_dssp -----CGGGGGGGCCTTE---EEEEEESSCTTTCCCCCHHHHHHHHHHHCTTC-----EEEEECTTTTTTSS--C--G-G
T ss_pred -----CHHHHHHhhccCC---cEEEEECCCCCCCEeecHHHHHHHHHhhcCCC-----EEEEECCCcccccC--C--c-c
Confidence 8899999987655 488889999999999999999999999 999 99999999854321 0 0 1
Q ss_pred CCcccccEEEEcCCCCCCCCCC--ceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHH
Q 011842 293 SFKKPIGSVSVSGHKFVGCPMP--CGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEV 370 (476)
Q Consensus 293 ~~~~~~Dsi~~s~hK~l~~p~~--~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~ 370 (476)
...+|+++.|+||+++.+.+ .|+++.++++++.+...... .++.. .+...|..++. .+.+..++
T Consensus 218 --~~g~Div~~S~sK~lg~~g~~~~G~l~~~~~~~~~l~~~~~~--------~G~~~--~~~~a~~~~~~--l~~l~~r~ 283 (415)
T 2fq6_A 218 --DFGIDVSIQAATKYLVGHSDAMIGTAVCNARCWEQLRENAYL--------MGQMV--DADTAYITSRG--LRTLGVRL 283 (415)
T ss_dssp --GGTCSEEEEETTTTTTCSSSCCCEEEEECTTTHHHHHHHHHH--------TTCCC--CHHHHHHHHHH--HHHHHHHH
T ss_pred --ccCCeEEEEeCccccCCCCCceEEEEEeCHHHHHHHHHHHHh--------cCCCC--CHHHHHHHHhh--hhHHHHHH
Confidence 12489999999999996543 68999887765544221111 12211 13444544443 34567778
Q ss_pred HHHHHHHHHHHHHHHhcCCeE-e-ec----------------CCeeEEEEecCC---c---HHHhhceee----------
Q 011842 371 QKCLRNAHYLKDRLLDAGISA-M-LN----------------ELSSTVVFERPQ---D---EEFVRRWQL---------- 416 (476)
Q Consensus 371 ~~~~~~a~~l~~~L~~~g~~~-~-~~----------------~~~~iv~f~~~~---~---~~~~~~~~l---------- 416 (476)
++..++++.+.+.|++.+... + .+ ...+++.|..++ . ..+.+.+.+
T Consensus 284 ~~~~~n~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~~~g~i~sf~l~g~~~~~~~~~~l~~l~~~~~a~s~G~~ 363 (415)
T 2fq6_A 284 RQHHESSLKVAEWLAEHPQVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKKKLNNEELANYLDNFSLFSMAYSWGGY 363 (415)
T ss_dssp HHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESSCCCHHHHHHHHTTCSSCEECSCCCSS
T ss_pred HHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECCCCCHHHHHHHHHhCCcCeEeccCCCC
Confidence 888889999999998875322 2 12 135678888764 1 123332210
Q ss_pred --------c-------------ccCCEEEEEEcCCCCHHHHHHHHHHHHH
Q 011842 417 --------A-------------CQGNIAHVVVMPNVTIDKLDDFLNELIE 445 (476)
Q Consensus 417 --------~-------------~~~~~lRv~~~~~~T~edid~~~~~l~~ 445 (476)
+ ...+.+|+++...+++++|+.|.++|++
T Consensus 364 ~s~~~~~~p~~~s~~~~~~~~g~~~~~iRlS~G~e~~~d~i~~l~~al~~ 413 (415)
T 2fq6_A 364 ESLILANQPEHIAAIRPQGEIDFSGTLIRLHIGLEDVDDLIADLDAGFAR 413 (415)
T ss_dssp SCEEEEECHHHHHTTCTTCCCCCCSCEEEEECCSSCHHHHHHHHHHHHHT
T ss_pred ceeEEecCCCccccccchhhcCCCCCEEEEEecCCCHHHHHHHHHHHHHh
Confidence 1 0136899999999999999999998864
No 153
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.87 E-value=5.3e-21 Score=189.90 Aligned_cols=266 Identities=14% Similarity=0.113 Sum_probs=184.0
Q ss_pred HHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHH----HHcCCeEEEEeCCCCCc
Q 011842 143 GVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAA----RMYRMECVKVDCLISGE 218 (476)
Q Consensus 143 ~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~----~~~G~~v~~v~~~~~g~ 218 (476)
++++.+++++|.+ + .+++++||+|+..++.++.. |++.|+++.++|.++...+ +..|++++.++.
T Consensus 2 ~l~~~la~~~g~~-~---~i~~~sG~~a~~~~~~~~~~--~g~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~----- 70 (331)
T 1pff_A 2 ALEGKIAKLEHAE-A---CAATASGMGAIAASVWTFLK--AGDHLISDDCLYGCTHALFEHQLRKFGVEVDFIDM----- 70 (331)
T ss_dssp HHHHHHHHHHTCS-E---EEEESSHHHHHHHHHHHHCC--TTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECT-----
T ss_pred hHHHHHHHHhCCC-e---EEEeCChHHHHHHHHHHhcC--CCCEEEEcCCCcchHHHHHHHHHHhcCCEEEEeCC-----
Confidence 3556678888886 2 56666779999999887754 8899999999999987665 457999999986
Q ss_pred cCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHH-hCCCCCceEEEEecCcccccccccccCCCCCCccc
Q 011842 219 IDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEE-SGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKP 297 (476)
Q Consensus 219 ~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~-~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~ 297 (476)
+|+++|++++++++ .+|++++++|++|.+.|+++|.++|++ ||+ ++++|++|+.+.... . + ...
T Consensus 71 ~d~~~l~~~i~~~~---~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~-----~li~D~a~~~~~~~~--~---~--~~~ 135 (331)
T 1pff_A 71 AVPGNIEKHLKPNT---RIVYFETPANPTLKVIDIEDAVKQARKQKDI-----LVIVDNTFASPILTN--P---L--DLG 135 (331)
T ss_dssp TSTTHHHHTCCTTE---EEEEEESSCTTTCCCCCHHHHHHHHTTSSSC-----EEEEECTTTHHHHCC--G---G--GGT
T ss_pred CCHHHHHHhhcCCC---eEEEEECCCCCcCcccCHHHHHHHHhhhcCC-----EEEEECCCcccccCC--h---h--hcC
Confidence 38889999886543 488889999999999999999999999 999 999999998654421 0 1 123
Q ss_pred ccEEEEcCCCCCCCCCC--ceeEEeeh-hhhhhhcCCccc-cCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHH
Q 011842 298 IGSVSVSGHKFVGCPMP--CGVQITRM-EHINVLSSNVEY-LASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKC 373 (476)
Q Consensus 298 ~Dsi~~s~hK~l~~p~~--~G~l~~~~-~~~~~l~~~~~y-l~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~ 373 (476)
+|+++.|+||+++.|.+ +|++++++ ++.+.+.....+ . .++. ..+.+|+++..+ +.+..+.++.
T Consensus 136 ~d~~~~s~~K~~~~~~~r~~G~~~~~~~~~~~~l~~~~~~~~-------~~~~---~~~~~~~~~~~l--~~~~~~~~~~ 203 (331)
T 1pff_A 136 VDIVVHSATKYINGHTDVVAGLVCSRADIIAKVKSQGIKDIT-------GAII---SPHDAWLITRGT--LTLDMRVKRA 203 (331)
T ss_dssp CSEEEEETTTTTSSSSSCCCEEEEECHHHHHHHHHTCCCCCC-------CCCC---CHHHHHHHHHHH--HHHHHHHHHH
T ss_pred CcEEEEECccccCCCCCceEEEEEeCcHHHHHHHHHHHHhhc-------CCCC---CHHHHHHHHcCc--chHHHHHHHH
Confidence 89999999999987765 89999998 776655432221 1 1111 234444443332 2344455556
Q ss_pred HHHHHHHHHHHHhcCC-eE-e------------e----cCCeeEEEEecCCcHHH---hhceee---cc-----------
Q 011842 374 LRNAHYLKDRLLDAGI-SA-M------------L----NELSSTVVFERPQDEEF---VRRWQL---AC----------- 418 (476)
Q Consensus 374 ~~~a~~l~~~L~~~g~-~~-~------------~----~~~~~iv~f~~~~~~~~---~~~~~l---~~----------- 418 (476)
.++++.+.+.|++.+. .. + . +...+++.|..++.+.+ .++..+ ..
T Consensus 204 ~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gI~~~~~s~g~~~sl~~~ 283 (331)
T 1pff_A 204 AENAQKVAEFLHEHKAVKKVYYPGLPDHPGHEIAKKQMKMFGSMIAFDVDGLEKAKKVLDNCHVVSLAVSLGGPESLIQH 283 (331)
T ss_dssp HHHHHHHHHHHHHCTTCCCEECTTSTTSTTHHHHHHHCSSCCSEEEEECSSHHHHHHHHHTCSSSEECSSCCSSSCEEEC
T ss_pred HHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECCHHHHHHHHHhCCCceeccCCCCcceeeec
Confidence 6667777777765421 11 0 0 01246777876543222 222111 10
Q ss_pred -------------------cCCEEEEEEcCCCCHHHHHHHHHHHHHH
Q 011842 419 -------------------QGNIAHVVVMPNVTIDKLDDFLNELIEN 446 (476)
Q Consensus 419 -------------------~~~~lRv~~~~~~T~edid~~~~~l~~~ 446 (476)
..+.+|+++...+|+++|++++++|+++
T Consensus 284 ~~~~~~~~~~~~~~~~~g~~~~~iRis~~~~~t~~~i~~l~~~l~~~ 330 (331)
T 1pff_A 284 PASMTHAGVPKEEREAAGLTDNLIRLSVGCENVQDIIDDLKQALDLV 330 (331)
T ss_dssp HHHHTSTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHTC
T ss_pred chhhcccccCHHHHHhcCCCCCeEEEEEecCCHHHHHHHHHHHHHHh
Confidence 1378999999999999999999998753
No 154
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=99.87 E-value=5.3e-21 Score=197.13 Aligned_cols=284 Identities=9% Similarity=0.026 Sum_probs=194.8
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCC---------
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRM--------- 206 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~--------- 206 (476)
+..++++++.+|+.+.++.+ +.++++|+|+++++.. +..... |++.|++++++|.++...++.+|.
T Consensus 99 g~~~l~~~ia~~~~~~~~~~--~~~i~~t~G~~~al~~-l~~l~~--~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~ 173 (432)
T 3ei9_A 99 GAKPLRAAIAKTFYGGLGIG--DDDVFVSDGAKCDISR-LQVMFG--SNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQ 173 (432)
T ss_dssp CCHHHHHHHHHHHHTTTTCC--GGGEEEESCHHHHHHH-HHHHHC--TTCCEEEEESCCTHHHHHHHHHTCSCCEETTTT
T ss_pred CCHHHHHHHHHHHHccCCCC--cceEEECCChHHHHHH-HHHHcC--CCCEEEEeCCCCHHHHHHHHHcCCccccccccc
Confidence 45789999999988655554 3569999999999876 444444 899999999999999999998884
Q ss_pred ---eEEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCcccccc---CHHHHHHHHHHhCCCCCceEEEEecCccc
Q 011842 207 ---ECVKVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVD---DLDLVIQTLEESGFTQDRFYIHCDGALFG 280 (476)
Q Consensus 207 ---~v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id---~l~~I~~ia~~~g~~~~~~~lhvD~a~~g 280 (476)
+++.++++.++.++.+ |++ .++ +.+|+++++.|++|.+. ++++|+++|++||+ ++++|++|+.
T Consensus 174 ~~~~~~~~~~~~~~~~~~~-l~~--~~~---~~~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~-----~li~Dea~~~ 242 (432)
T 3ei9_A 174 KYGNIEYMRCTPENGFFPD-LST--VGR---TDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGS-----IIVYDSAYAM 242 (432)
T ss_dssp EETTCEEEECCGGGTTSCC-GGG--CCC---CSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTC-----EEEEECTTGG
T ss_pred ccCceEEeccCcccCCcCC-hhh--CCC---CCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCc-----EEEEccchHh
Confidence 6888888754332222 222 122 33777789999999885 47788888999999 9999999987
Q ss_pred ccccccccCCCCCC--cccccEEEEcCCCCCC-CCCCceeEEeehhh--------hhhhcCCccccCCCCCcccCCCCCh
Q 011842 281 LMMPFVKKAPKVSF--KKPIGSVSVSGHKFVG-CPMPCGVQITRMEH--------INVLSSNVEYLASRDATIMGSRNGH 349 (476)
Q Consensus 281 ~~~~~~~~~~~~~~--~~~~Dsi~~s~hK~l~-~p~~~G~l~~~~~~--------~~~l~~~~~yl~~~~~~~~~sr~~~ 349 (476)
+.... ...+.... ....+++..+++|+++ .++++|+++++++. .+.+.....+. ..+ .
T Consensus 243 ~~~~~-~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~---~ 311 (432)
T 3ei9_A 243 YMSDD-NPRSIFEIPGAEEVAMETASFSNYAGFTGVRLGWTVIPKKLLYSDGFPVAKDFNRIICTC-------FNG---A 311 (432)
T ss_dssp GCCSS-CCSSGGGSTTGGGTEEEEEESHHHHCTTTTCCEEEECCTTCBCTTSCBHHHHHHHHHHHS-------CCC---S
T ss_pred hccCC-CCCChhhcCCCCCeEEEEecchhccCCcccceEEEEEChHHhhcchHHHHHHHHHHhccc-------cCC---C
Confidence 65432 11111111 1235688899999986 78999999998876 33332111110 011 2
Q ss_pred hHHHHHHHHHHhC---hhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecCC--cHHH----hh--ceeec-
Q 011842 350 APIFLWYTLNRKG---YKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERPQ--DEEF----VR--RWQLA- 417 (476)
Q Consensus 350 ~~l~~~~~l~~~g---~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~--~~~~----~~--~~~l~- 417 (476)
..+.+.+++..+. .+.+++..++..++++++.+.|++.|+....++.++++.+..+. ..++ .+ ++.+.
T Consensus 312 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~ 391 (432)
T 3ei9_A 312 SNISQAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTSLGYDVYGGKNAPYVWVHFPNQSSWDVFAEILEKTHVVTTP 391 (432)
T ss_dssp CHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEECSSSSEEEEECTTSCHHHHHHHHHHHHCEECEE
T ss_pred CHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEEECCCCCHHHHHHHHHHHCCEEEeC
Confidence 2455555555543 23467788888999999999999998765555566777777653 2222 22 33332
Q ss_pred ------ccCCEEEEEEcCCCCHHHHHHHHHHHHHHHH
Q 011842 418 ------CQGNIAHVVVMPNVTIDKLDDFLNELIENRS 448 (476)
Q Consensus 418 ------~~~~~lRv~~~~~~T~edid~~~~~l~~~~~ 448 (476)
...+.+|+++ .+++++|+..++.|++-.+
T Consensus 392 g~~f~~~~~~~iRis~--~~~~e~l~~~l~rl~~~~~ 426 (432)
T 3ei9_A 392 GSGFGPGGEGFVRVSA--FGHRENILEACRRFKQLYK 426 (432)
T ss_dssp GGGGCGGGTTEEEEEC--CSCHHHHHHHHHHHHHHHT
T ss_pred chHhCCCCCCEEEEEe--cCCHHHHHHHHHHHHHHhh
Confidence 1257899986 5699999999999976543
No 155
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=99.87 E-value=1e-21 Score=199.80 Aligned_cols=294 Identities=12% Similarity=-0.001 Sum_probs=190.9
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcc--cEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeC
Q 011842 136 HSRQFEVGVLDWFARLWELENNEY--WGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDC 213 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~--~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~ 213 (476)
+..++++++.+++.+..+...++. .+++|+|||+|+..++.......|++.|+++.++|.++...++..|++++.+|+
T Consensus 71 g~~~lr~~la~~~~~~~~~~~~~~~~~i~~t~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~ 150 (397)
T 3fsl_A 71 GLNCYRHAIAPLLFGADHPVLKQQRVATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTYPW 150 (397)
T ss_dssp CCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCHHHHHHHHHTTCCEEEECC
T ss_pred chHHHHHHHHHHHhcCCcccccccceEEEEcCCcHHHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHHcCCceEEEee
Confidence 456888888888865444211123 589999999999988654332348999999999999999999999999999998
Q ss_pred --CCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccc---cCHHHHHHHHHHhCCCCCceEEEEecCccccccccc-c
Q 011842 214 --LISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAV---DDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFV-K 287 (476)
Q Consensus 214 --~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~i---d~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~-~ 287 (476)
++++.+|+++|++++.+.+.+..+++++++.|+||.+ +++++|+++|++||+ ++++|++|+.+..... .
T Consensus 151 ~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~-----~li~De~~~~~~~~~~~~ 225 (397)
T 3fsl_A 151 YDEATNGVRFNDLLATLKTLQAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKAREL-----IPFLDIAYQGFGAGMEED 225 (397)
T ss_dssp EETTTTEECHHHHHHHHTTCCTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTC-----EEEEEESCTTSSSCTTGG
T ss_pred eeccCCcCcHHHHHHHHHhCCCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCE-----EEEEecCchhhccCcccc
Confidence 4578899999999998643344578888999999999 557799999999999 9999999987654311 1
Q ss_pred cCCCCCC--cccccEEEEcCCCCCC-CCCCceeEEee---hhhhhhhcCC-ccccCCCCCcccCCCCChhHHHHHHHHHH
Q 011842 288 KAPKVSF--KKPIGSVSVSGHKFVG-CPMPCGVQITR---MEHINVLSSN-VEYLASRDATIMGSRNGHAPIFLWYTLNR 360 (476)
Q Consensus 288 ~~~~~~~--~~~~Dsi~~s~hK~l~-~p~~~G~l~~~---~~~~~~l~~~-~~yl~~~~~~~~~sr~~~~~l~~~~~l~~ 360 (476)
..+...+ .....++..|++|.++ .++++|++++. .+.++.+... ..+... + ..+.+ .+.+.++...
T Consensus 226 ~~~~~~~~~~~~~~i~~~S~SK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~---~~~~~~~~~~ 298 (397)
T 3fsl_A 226 AYAIRAIASAGLPALVSNSFSKIFSLYGERVGGLSVMCEDAEAAGRVLGQLKATVRR---N-YSSPP---NFGAQVVAAV 298 (397)
T ss_dssp GHHHHHHHHTTCCEEEEEECTTTTTCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHT---T-TSSCC---SHHHHHHHHH
T ss_pred cHHHHHHHhcCCCEEEEecccccccCcCCCeeEEEEecCCHHHHHHHHHHHHHHHHh---c-cCCCC---HHHHHHHHHH
Confidence 1000111 1123467788999987 67889999752 2333322110 011000 0 11111 1222222222
Q ss_pred hC--------hhcHHHHHHHHHHHHHHHHHHHHhc----CCeEeecCCeeEEEEecCCcHHH---hh--ceeecccCCEE
Q 011842 361 KG--------YKGFQKEVQKCLRNAHYLKDRLLDA----GISAMLNELSSTVVFERPQDEEF---VR--RWQLACQGNIA 423 (476)
Q Consensus 361 ~g--------~~g~~~~~~~~~~~a~~l~~~L~~~----g~~~~~~~~~~iv~f~~~~~~~~---~~--~~~l~~~~~~l 423 (476)
+. .+.+++..++..++++++.+.|++. ++....+.....+++..+ .+.+ .+ +..+...+
T Consensus 299 l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~gi~v~~g~--- 374 (397)
T 3fsl_A 299 LNDEALKASWLKEVEEMRTRILAMRQELVKVLSTEMPERNFDYLLNQRGMFSYTGLS-AAQVDRLREEFGVYLIASG--- 374 (397)
T ss_dssp HTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCCTHHHHCCSSEEECCCC-HHHHHHHHHTTCEECCTTC---
T ss_pred hcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceeecCCceEEEecCCC-HHHHHHHHHhCCEEECCCC---
Confidence 22 3446777888899999999999987 343333333333333332 2222 22 22333222
Q ss_pred EEEEcCCCCHHHHHHHHHHHHHH
Q 011842 424 HVVVMPNVTIDKLDDFLNELIEN 446 (476)
Q Consensus 424 Rv~~~~~~T~edid~~~~~l~~~ 446 (476)
|+++.. .|.++|++++++|+++
T Consensus 375 Ris~~~-~~~~~i~~~~~~l~~~ 396 (397)
T 3fsl_A 375 RMCVAG-LNTANVQRVAKAFAAV 396 (397)
T ss_dssp EEEGGG-CCTTTHHHHHHHHHHH
T ss_pred eEEEEe-cCHhhHHHHHHHHHhh
Confidence 888753 3667799999999865
No 156
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.87 E-value=1.6e-20 Score=189.44 Aligned_cols=272 Identities=14% Similarity=0.089 Sum_probs=181.2
Q ss_pred HHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhh----CCC-cEEEecCCCchHHHH-HHHHcCCe--------
Q 011842 142 VGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREV----FPD-GILYASRESHYSVFK-AARMYRME-------- 207 (476)
Q Consensus 142 ~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~----~p~-~~Vl~s~~~H~S~~~-~~~~~G~~-------- 207 (476)
.++++++++++|++ ..+++|+|||+|+..++.+++.. .|+ +.|++++++|..+.. +....+..
T Consensus 73 ~~l~~~la~~~g~~---~~v~~~~g~t~a~~~~~~~~~~~~~~~~~g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~ 149 (375)
T 2eh6_A 73 EELAHKLVKHFWTE---GKVFFANSGTESVEAAIKLARKYWRDKGKNKWKFISFENSFHGRTYGSLSATGQPKFHKGFEP 149 (375)
T ss_dssp HHHHHHHHHTSSSC---EEEEEESSHHHHHHHHHHHHHHHHHHTTCCCCEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCS
T ss_pred HHHHHHHHhhcCCC---CeEEEeCchHHHHHHHHHHHHHHhccCCCCCCEEEEECCCcCCCchhhhhhcCCccccCCCCC
Confidence 45667788888883 24999999999999998765321 367 889998888655433 33332221
Q ss_pred ----EEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC----HHHHHHHHHHhCCCCCceEEEEecCcc
Q 011842 208 ----CVKVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD----LDLVIQTLEESGFTQDRFYIHCDGALF 279 (476)
Q Consensus 208 ----v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~----l~~I~~ia~~~g~~~~~~~lhvD~a~~ 279 (476)
+..++. .|+++|+++++++ +.+|+++.+.+++|.+.| +++|.++|++||+ ++|+|++|+
T Consensus 150 ~~~~~~~~~~-----~d~~~l~~~l~~~---~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~-----~li~De~~~ 216 (375)
T 2eh6_A 150 LVPGFSYAKL-----NDIDSVYKLLDEE---TAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDV-----LLIIDEVQT 216 (375)
T ss_dssp CCSSEEEECT-----TCHHHHHTTCCTT---EEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTC-----EEEEECTTT
T ss_pred CCCCceeCCC-----chHHHHHHHhcCC---eEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCC-----EEEEecccc
Confidence 344443 4899999888643 447888888999999988 9999999999999 999999998
Q ss_pred cccccccccCCCCCCc-ccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHH
Q 011842 280 GLMMPFVKKAPKVSFK-KPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTL 358 (476)
Q Consensus 280 g~~~~~~~~~~~~~~~-~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l 358 (476)
++... .... .+... ...|++++| |++++|+++|++++++++++.+... .+. .++ + ...+.+++++
T Consensus 217 ~~~~~-~~~~-~~~~~~~~~d~~s~S--K~~~~g~~~G~~~~~~~~~~~~~~~-~~~----~~~-~----~~~~~~~~~~ 282 (375)
T 2eh6_A 217 GIGRT-GEFY-AYQHFNLKPDVIALA--KGLGGGVPIGAILAREEVAQSFTPG-SHG----STF-G----GNPLACRAGT 282 (375)
T ss_dssp TTTTT-SSSS-GGGGGTCCCSEEEEC--GGGGTTSCCEEEEEEHHHHTTCCTT-SCC----CSS-T----TCHHHHHHHH
T ss_pred CCCCC-Ccch-hhhhcCCCCCEEEEc--ccccCCCCeEEEEEcHHHHhhhcCC-CCC----CCC-C----CCHHHHHHHH
Confidence 53221 1110 01111 126888666 8888899999999998876655331 110 111 1 1234444433
Q ss_pred HHhChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecCC-cHHHh-----hceeec-ccCCEEEEEEcCCC
Q 011842 359 NRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERPQ-DEEFV-----RRWQLA-CQGNIAHVVVMPNV 431 (476)
Q Consensus 359 ~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~-~~~~~-----~~~~l~-~~~~~lRv~~~~~~ 431 (476)
..+.. +.+..++..++++++.+.|++.+.... ++..+++.+..+. ..++. +++.+. ...+.+|++++..+
T Consensus 283 ~~l~~--~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~iRi~~~~~~ 359 (375)
T 2eh6_A 283 VVVDE--VEKLLPHVREVGNYFKEKLKELGKGKV-KGRGLMLGLELERECKDYVLKALEKGLLINCTAGKVLRFLPPLII 359 (375)
T ss_dssp HHHHH--HHHHHHHHHHHHHHHHHHHHHTTSSEE-EEETTEEEEECSSCCHHHHHHHHHTTEECEEETTTEEEECCCTTC
T ss_pred HHHHH--HHHHHHHHHHHHHHHHHHHHHHhcCCc-eEEEEEEEEEEcCcHHHHHHHHHHCCCEEecCCCCEEEEECCCCC
Confidence 33311 126778888899999999998775332 3344566666653 23332 233332 34678999998899
Q ss_pred CHHHHHHHHHHHHHH
Q 011842 432 TIDKLDDFLNELIEN 446 (476)
Q Consensus 432 T~edid~~~~~l~~~ 446 (476)
|++++++++++|+++
T Consensus 360 ~~~~i~~~~~~l~~~ 374 (375)
T 2eh6_A 360 QKEHIDRAISVLREI 374 (375)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHh
Confidence 999999999999865
No 157
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=99.87 E-value=1.9e-20 Score=192.28 Aligned_cols=292 Identities=10% Similarity=-0.045 Sum_probs=190.4
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHH--HHHHHHHhhCC---------CcEEEecCCCchHHHHHHHHc
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNL--HGILVGREVFP---------DGILYASRESHYSVFKAARMY 204 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~--~al~aa~~~~p---------~~~Vl~s~~~H~S~~~~~~~~ 204 (476)
+..+++++ ++++++++++ .+++|+|+++++. .++.+.....| ++.|+++.++|.++...++..
T Consensus 71 g~~~lr~~----ia~~~~~~~~--~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~ 144 (423)
T 3ez1_A 71 GLPSARAL----FAGYLDVKAE--NVLVWNNSSLELQGLVLTFALLHGVRGSTGPWLSQTPKMIVTVPGYDRHFLLLQTL 144 (423)
T ss_dssp CCHHHHHH----HHHHTTSCGG--GEEECSSCHHHHHHHHHHHHHHTCCTTCSSCGGGGCCEEEEEESCCHHHHHHHHHH
T ss_pred ChHHHHHH----HHHHhCCChh--hEEEeCCcHHHHHHHHHHHHHhccCCCccccccCCCCEEEEcCCCcHHHHHHHHHc
Confidence 34556555 5556677653 5999999999997 67766654224 589999999999999999999
Q ss_pred CCeEEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEe-eCCCccccccCHH---HHHHHH-HHhCCCCCceEEEEecCcc
Q 011842 205 RMECVKVDCLISGEIDCADFKAKLLQNKDKPAIINVN-IGTTVKGAVDDLD---LVIQTL-EESGFTQDRFYIHCDGALF 279 (476)
Q Consensus 205 G~~v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t-~gtt~tG~id~l~---~I~~ia-~~~g~~~~~~~lhvD~a~~ 279 (476)
|++++.+|++++| +|+++|++++.+.. ++.+|+++ ++.|+||.+.+.+ +|+++| ++||+ ++++|++|+
T Consensus 145 g~~~~~v~~~~~g-~d~~~l~~~l~~~~-~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~-----~li~De~y~ 217 (423)
T 3ez1_A 145 GFELLTVDMQSDG-PDVDAVERLAGTDP-SVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDF-----TIFADDAYR 217 (423)
T ss_dssp TCEEEEEEEETTE-ECHHHHHHHHHSCT-TEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTC-----EEEEECTTS
T ss_pred CCEEEeccCCCCC-CCHHHHHHHHhhCC-CceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCC-----EEEEECCcc
Confidence 9999999998665 99999999996322 23456544 7899999998766 888888 89999 999999998
Q ss_pred cccccc-c--ccCCCCCC-----cccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhH
Q 011842 280 GLMMPF-V--KKAPKVSF-----KKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAP 351 (476)
Q Consensus 280 g~~~~~-~--~~~~~~~~-----~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~ 351 (476)
...+.. . ...+.+.. ....+++..|++|+++.++++|+++.++++++.+.....+.. .+. ..
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~G~r~G~~~~~~~~~~~~~~~~~~~~-------~~~---~~ 287 (423)
T 3ez1_A 218 VHHLVEEDRAEPVNFVVLARDAGYPDRAFVFASTSKITFAGAGLGFVASSEDNIRWLSKYLGAQS-------IGP---NK 287 (423)
T ss_dssp SCBCCSSSCCCCCCHHHHHHHHTCTTSEEEEEESTTTSCSSSSCEEEEECHHHHHHHHHHHHHSC-------SCC---CH
T ss_pred hhhcCCCCCCCCcchhhhhhccCCCCeEEEEeCchhhccCCcceEEEEeCHHHHHHHHHHHhhhc-------cCC---CH
Confidence 533221 1 11111111 112567888999988889999999999887665532222110 111 12
Q ss_pred HHHHHHHHHhCh------hcHHHHHHHHHHHHHHHHHHHH----hcC-CeEee-cCCeeEEEEecCC--cHHHh-----h
Q 011842 352 IFLWYTLNRKGY------KGFQKEVQKCLRNAHYLKDRLL----DAG-ISAML-NELSSTVVFERPQ--DEEFV-----R 412 (476)
Q Consensus 352 l~~~~~l~~~g~------~g~~~~~~~~~~~a~~l~~~L~----~~g-~~~~~-~~~~~iv~f~~~~--~~~~~-----~ 412 (476)
+.++++...+.. +.+++..+...++.+.+.+.|. +.| ...+. +...+++.+..+. ...+. +
T Consensus 288 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~l~~~ 367 (423)
T 3ez1_A 288 VEQARHVKFLTEYPGGLEGLMRDHAAIIAPKFRAVDEVLRAELGEGGEYATWTLPKGGYFISLDTAEPVADRVVKLAEAA 367 (423)
T ss_dssp HHHHHHHHHHHHSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSSEEECCCSBSSCEEEEESSSCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCceEEeCCCccEEEEEECCCCcHHHHHHHHHHC
Confidence 334433333322 2233344444445555555554 355 33333 3445666666553 22222 2
Q ss_pred ceeecc-----------cCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 011842 413 RWQLAC-----------QGNIAHVVVMPNVTIDKLDDFLNELIENRSTWY 451 (476)
Q Consensus 413 ~~~l~~-----------~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~ 451 (476)
+..+.. ..+.+|+++... |+++|+.+++.|.++.++..
T Consensus 368 gv~v~~~g~~~~~~~~~~~~~iRis~~~~-~~~~i~~~~~~l~~~l~~~~ 416 (423)
T 3ez1_A 368 GVSLTPAGATYPAGQDPHNRNLRLAPTRP-PVEEVRTAMQVVAACIRLAT 416 (423)
T ss_dssp TEECCCTTTTSSTTCCSSSCEEEECCSSS-CHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEecCcccccCCCCCCCCeEEEEcCCC-CHHHHHHHHHHHHHHHHHHH
Confidence 333321 247899988544 99999999999999887654
No 158
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.87 E-value=5.4e-20 Score=188.46 Aligned_cols=287 Identities=13% Similarity=0.078 Sum_probs=184.8
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchH-HHHHHH--HcCC--eEEEEeC
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYS-VFKAAR--MYRM--ECVKVDC 213 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S-~~~~~~--~~G~--~v~~v~~ 213 (476)
.+++..++++++++|.+. ..++++|||+|+..++.++.. |++.|++++++|.+ +...+. ..|. .++.++.
T Consensus 78 ~~~~~a~~~~~~~~~~~~---~~v~~~~Gs~a~~~al~~~~~--~gd~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 152 (425)
T 3ecd_A 78 EVEALAIERVKRLFNAGH---ANVQPHSGAQANGAVMLALAK--PGDTVLGMSLDAGGHLTHGAKPALSGKWFNALQYGV 152 (425)
T ss_dssp HHHHHHHHHHHHHHTCSE---EECCCSSHHHHHHHHHHHHCC--TTCEEEEECC------------------CEEEEECC
T ss_pred HHHHHHHHHHHHHhCCCC---ceeecCchHHHHHHHHHHccC--CCCEEEEcccccccceecchhhhhcccceeeeecCC
Confidence 445555688999999874 135689999999999888754 89999999999988 323322 4455 4556666
Q ss_pred C-CCCccCHHHHHHHHHc-CCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCC
Q 011842 214 L-ISGEIDCADFKAKLLQ-NKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPK 291 (476)
Q Consensus 214 ~-~~g~~D~~~Le~~l~~-~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~ 291 (476)
+ .++.+|+++|++++.+ +++ +|+++++.+ |...++++|.++|++||+ ++|+|++|+.+.......
T Consensus 153 ~~~~~~~d~~~l~~~i~~~~~~---~v~~~~~~~--~~~~~l~~i~~l~~~~~~-----~li~De~~~~g~~~~~~~--- 219 (425)
T 3ecd_A 153 SRDTMLIDYDQVEALAQQHKPS---LIIAGFSAY--PRKLDFARFRAIADSVGA-----KLMVDMAHIAGVIAAGRH--- 219 (425)
T ss_dssp CTTTSSCCHHHHHHHHHHHCCS---EEEEECSCC--CSCCCHHHHHHHHHHHTC-----EEEEECGGGHHHHHTTSS---
T ss_pred CcccCccCHHHHHHHHhhcCCc---EEEEccccC--CCcCCHHHHHHHHHHcCC-----EEEEECcChHhhhhcccc---
Confidence 5 3478999999999974 454 666665544 788999999999999999 999999976443322221
Q ss_pred CCCcccccEEEEcCCCCCCCCCCceeEEeehh-hhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHH
Q 011842 292 VSFKKPIGSVSVSGHKFVGCPMPCGVQITRME-HINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEV 370 (476)
Q Consensus 292 ~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~-~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~ 370 (476)
......+|+++.++||++++| ++|+++.+++ +.+.+... .+ ....++.......++++++.....+++++..
T Consensus 220 ~~~~~~~di~~~s~sK~l~g~-~~g~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~ 292 (425)
T 3ecd_A 220 ANPVEHAHVVTSTTHKTLRGP-RGGFVLTNDEEIAKKINSA-VF-----PGLQGGPLMHVIAGKAVAFGEALTDDFKTYI 292 (425)
T ss_dssp CCGGGTCSEEEEESSGGGCCC-SCEEEEESCHHHHHHHHHH-HC----------CCCHHHHHHHHHHHHHHTSHHHHHHH
T ss_pred cCchhcCcEEEecCCcccCCC-CcEEEEeCCHHHHHHHHhh-hC-----ccccCCccHHHHHHHHHHHHHHHHHhHHHHH
Confidence 111123799999999999654 6799998854 44333210 01 0111222222233444555554456778899
Q ss_pred HHHHHHHHHHHHHHHhcCCeEeec-CCeeEEEEecCC---c-HHHh-----hceeec----c-------cCCEEEEE---
Q 011842 371 QKCLRNAHYLKDRLLDAGISAMLN-ELSSTVVFERPQ---D-EEFV-----RRWQLA----C-------QGNIAHVV--- 426 (476)
Q Consensus 371 ~~~~~~a~~l~~~L~~~g~~~~~~-~~~~iv~f~~~~---~-~~~~-----~~~~l~----~-------~~~~lRv~--- 426 (476)
++..++++++.+.|++.|+....+ ...+++.+..+. + ..+. +++.+. . ..+.+|++
T Consensus 293 ~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~p~~~~~~~~~~~iRi~~~~ 372 (425)
T 3ecd_A 293 DRVLANAQALGDVLKAGGVDLVTGGTDNHLLLVDLRPKGLKGAQVEQALERAGITCNKNGIPFDPEKPTITSGIRLGTPA 372 (425)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEESHH
T ss_pred HHHHHHHHHHHHHHHhCCCeeccCCCCceEEEEEeCCCCCCHHHHHHHHHHcCCEecccccCCCCCCCCCccceeccchh
Confidence 999999999999999988765443 245566665432 1 2221 233332 1 12478998
Q ss_pred -EcCCCCHHHHHHHHHHHHHHHHHH
Q 011842 427 -VMPNVTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 427 -~~~~~T~edid~~~~~l~~~~~~~ 450 (476)
....+++++|+++++.|+++.+..
T Consensus 373 ~~~~~~~~e~i~~~~~~l~~~l~~~ 397 (425)
T 3ecd_A 373 GTTRGFGAAEFREVGRLILEVFEAL 397 (425)
T ss_dssp HHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred heeccCCHHHHHHHHHHHHHHHhcc
Confidence 455567999999999999988765
No 159
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=99.87 E-value=1.3e-21 Score=200.28 Aligned_cols=294 Identities=10% Similarity=-0.004 Sum_probs=194.9
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEE--cCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeC
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYI--TNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDC 213 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~--t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~ 213 (476)
+..++++++.+++.+..|.+.++.++++ |+||++|+..++.......||+.|+++.++|.++...++..|++++.+|.
T Consensus 74 g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~t~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~ 153 (412)
T 1yaa_A 74 GLPSLTSNAAKIIFGTQSDALQEDRVISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMAIFENQGLKTATYPY 153 (412)
T ss_dssp CCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCTTHHHHHHTTTCCEEEEEC
T ss_pred CcHHHHHHHHHHHhcCCCCCCCcceEEEEeccchHhHHHHHHHHHHHhCCCCEEEEeCCCCccHHHHHHHcCceEEEEee
Confidence 4568888888888655553211235888 99999999988544332238999999999999999999999999999998
Q ss_pred -CC-CCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCccccccccc--
Q 011842 214 -LI-SGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFV-- 286 (476)
Q Consensus 214 -~~-~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~-- 286 (476)
++ ++.+|+++|++++.+.+....++++++++|+||.+.+ +++|+++|++||+ ++++|++|+++.+...
T Consensus 154 ~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~-----~li~De~~~~~~~~~~~~ 228 (412)
T 1yaa_A 154 WANETKSLDLNGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNH-----IALFDTAYQGFATGDLDK 228 (412)
T ss_dssp EETTTTEECHHHHHHHHHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTC-----EEEEEESCTTTSSSCHHH
T ss_pred ecCCCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCC-----EEEEecccccccCCcccc
Confidence 53 6789999999999865322345666899999999854 7789999999999 9999999976543210
Q ss_pred ccCCCCCCcc-cc----cEEEEcCCCCCCC-CCCceeEE--e-----ehh----hhhhhcCCccccCCCCCcccCCCCCh
Q 011842 287 KKAPKVSFKK-PI----GSVSVSGHKFVGC-PMPCGVQI--T-----RME----HINVLSSNVEYLASRDATIMGSRNGH 349 (476)
Q Consensus 287 ~~~~~~~~~~-~~----Dsi~~s~hK~l~~-p~~~G~l~--~-----~~~----~~~~l~~~~~yl~~~~~~~~~sr~~~ 349 (476)
...+..++.. .. ++++.+++|.++. ++++|+++ . +.+ +++.+.....+. ..+.
T Consensus 229 ~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~GlriG~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-------~~~~--- 298 (412)
T 1yaa_A 229 DAYAVRLGVEKLSTVSPVFVCQSFAKNAGMYGERVGCFHLALTKQAQNKTIKPAVTSQLAKIIRSE-------VSNP--- 298 (412)
T ss_dssp HTHHHHHHHHHTTTTCCEEEEEECTTTSCCGGGCEEEEEEECCSCTTHHHHHHHHHHHHHHHHHTT-------TSSC---
T ss_pred hhHHHHHHHhcCCCCcceEEEeccCCCCCCcCCcceEEEEEecCCCCCHHHHHHHHHHHHHHHhhc-------cCCC---
Confidence 1100001111 12 4667889999885 67799998 6 444 444332211110 0111
Q ss_pred hHHHHHHHHHHhC--------hhcHHHHHHHHHHHHHHHHHHHHhcC----CeEeecCCeeEEEEecCCcHHH---h--h
Q 011842 350 APIFLWYTLNRKG--------YKGFQKEVQKCLRNAHYLKDRLLDAG----ISAMLNELSSTVVFERPQDEEF---V--R 412 (476)
Q Consensus 350 ~~l~~~~~l~~~g--------~~g~~~~~~~~~~~a~~l~~~L~~~g----~~~~~~~~~~iv~f~~~~~~~~---~--~ 412 (476)
..+.++++...+. .+.+++..++..++++++.+.|++.+ +.. .++..+++.|...+...+ . +
T Consensus 299 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~ 377 (412)
T 1yaa_A 299 PAYGAKIVAKLLETPELTEQWHKDMVTMSSRITKMRHALRDHLVKLGTPGNWDH-IVNQCGMFSFTGLTPQMVKRLEETH 377 (412)
T ss_dssp CHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCTH-HHHCCSSEEECCCCHHHHHHHHHHH
T ss_pred ChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCeee-eccCceEEEeeCCCHHHHHHHHHhC
Confidence 1233333333332 13567778888889999999999876 433 334444444432222222 1 1
Q ss_pred ceeecccCCEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Q 011842 413 RWQLACQGNIAHVVVMPNVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 413 ~~~l~~~~~~lRv~~~~~~T~edid~~~~~l~~~~~~ 449 (476)
++.+.. .+|+++.. +|++++++++++|+++.+.
T Consensus 378 gi~v~~---~~Ris~~~-~~~~~i~~~~~~l~~~~~~ 410 (412)
T 1yaa_A 378 AVYLVA---SGRASIAG-LNQGNVEYVAKAIDEVVRF 410 (412)
T ss_dssp CEECCT---TSEEEGGG-CCTTTHHHHHHHHHHHHHH
T ss_pred CEEecc---CcEEEEcc-CCHhHHHHHHHHHHHHHHh
Confidence 222222 57998873 5999999999999988753
No 160
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.87 E-value=4.6e-20 Score=187.52 Aligned_cols=282 Identities=15% Similarity=0.074 Sum_probs=183.1
Q ss_pred HHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHH-----hhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCC
Q 011842 141 EVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGR-----EVFPDGILYASRESHYSVFKAARMYRMECVKVDCLI 215 (476)
Q Consensus 141 e~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~-----~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~ 215 (476)
..++++.+++++|.+ ..+++++||+|+..++.+++ ...+++.|+++.++|.++..+++..|++++.+++++
T Consensus 36 ~~~l~~~la~~~~~~----~~i~~~sGt~a~~~al~~~~~~~~~~~~~g~~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~ 111 (390)
T 3b8x_A 36 VKQYETQFAKTFGSK----YAVMVSSGSTANLLMIAALFFTKKPRLKKGDEIIVPAVSWSTTYYPLQQYGLRVKFVDIDI 111 (390)
T ss_dssp HHHHHHHHHHHHTCS----EEEEESCHHHHHHHHHHHTTSSSSCSCCTTCEEEEESSSCHHHHHHHHHTTCEEEEECBCT
T ss_pred HHHHHHHHHHHHCCC----cEEEECCHHHHHHHHHHHHHhhhhcCCCCcCEEEECCCCcHHHHHHHHHcCCEEEEEecCc
Confidence 344555677777875 28899999999999998873 123789999999999999999999999999999986
Q ss_pred C-CccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCC
Q 011842 216 S-GEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSF 294 (476)
Q Consensus 216 ~-g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~ 294 (476)
+ +.+|+++|+++|++++ .+|++++ ++|...|+++|.++|++||+ ++|+|++|+.+..+.... +..
T Consensus 112 ~~~~~d~~~l~~~i~~~~---~~v~~~~---~~g~~~~~~~i~~l~~~~~~-----~li~D~a~~~g~~~~~~~---~g~ 177 (390)
T 3b8x_A 112 NTLNIDIESLKEAVTDST---KAILTVN---LLGNPNNFDEINKIIGGRDI-----ILLEDNCESMGATFNNKC---AGT 177 (390)
T ss_dssp TTCSBCHHHHHHHCCTTE---EEEEEEC---GGGCCCCHHHHHHHHTTSCC-----EEEEECTTCTTCEETTEE---TTS
T ss_pred cccCcCHHHHHHHhCcCC---eEEEEEC---CccChhhHHHHHHHHHHcCC-----EEEEECcCcccCEECCcc---ccc
Confidence 5 8999999999997644 3666653 56889999999999999999 999999998544332211 111
Q ss_pred cccccEEEEcCCCCCCCCCCceeEEeeh-hhhhhh---cCCc---c---------------ccCCCCCcccCCCCChhHH
Q 011842 295 KKPIGSVSVSGHKFVGCPMPCGVQITRM-EHINVL---SSNV---E---------------YLASRDATIMGSRNGHAPI 352 (476)
Q Consensus 295 ~~~~Dsi~~s~hK~l~~p~~~G~l~~~~-~~~~~l---~~~~---~---------------yl~~~~~~~~~sr~~~~~l 352 (476)
...+.+++..+.|.+.+|.+ |++++++ ++.+.+ .... + |.........|.+.....+
T Consensus 178 ~~~~~~~s~~~~k~~~~g~g-G~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 256 (390)
T 3b8x_A 178 FGLMGTFSSFYSNHIATMEG-GCIVTDDEEIYHILLCIRAHGWTRNLPKKNKVTGVKSDDQFEESFKFVLPGYNVRPLEM 256 (390)
T ss_dssp SSSEEEEECCTTSSSCSSSC-EEEEESCHHHHHHHHHHTBTTBSTTSCSEETTTEECCSCTTTSSSCBCSCCCBCCCCHH
T ss_pred ccceEEEEccCCCCCccCCc-eEEEeCCHHHHHHHHHHHhcCCCccccccccccccccccccccccceeccccccCcCHH
Confidence 11123444333444554555 8888886 443322 1100 0 0000000011222223455
Q ss_pred HHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecC--CeeE--EEEecC-----CcHHHhh-----ceeec-
Q 011842 353 FLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNE--LSST--VVFERP-----QDEEFVR-----RWQLA- 417 (476)
Q Consensus 353 ~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~--~~~i--v~f~~~-----~~~~~~~-----~~~l~- 417 (476)
..+.++..+ +.+++..++..++++++.+.|++.+...+..+ .++. +.+..+ ..+.+.+ ++.+.
T Consensus 257 ~aa~~l~~l--~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~L~~~gI~v~~ 334 (390)
T 3b8x_A 257 SGAIGIEQL--KKLPRFISVRRKNAEYFLDKFKDHPYLDVQQETGESSWFGFSFIIKKDSGVIRKQLVENLNSAGIECRP 334 (390)
T ss_dssp HHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHTTCSSEEECCCCSBCCCCEEEEEECTTSCCCHHHHHHHHHHTTBCCBC
T ss_pred HHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCcccEEEEEEecCcCcccHHHHHHHHHHCCCCeee
Confidence 555555543 56778889999999999999998743333322 2322 333333 2222221 11110
Q ss_pred ------c-c----------------------CCEEEEEEcCCCCHHHHHHHHHHH
Q 011842 418 ------C-Q----------------------GNIAHVVVMPNVTIDKLDDFLNEL 443 (476)
Q Consensus 418 ------~-~----------------------~~~lRv~~~~~~T~edid~~~~~l 443 (476)
| . .+.+|+++++.+|++|||+++++|
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~t~~di~~i~~~l 389 (390)
T 3b8x_A 335 IVTGNFLKNTDVLKYFDYTVHNNVDNAEYLDKNGLFVGNHQIELFDEIDYLREVL 389 (390)
T ss_dssp STTSSGGGCHHHHTTCEEEESSCCHHHHHHHHHEEEEECCSSCCHHHHHHHHHHT
T ss_pred ecCCchhhcchhhhcCCCCCcCCChHHHHHhcCEEEeeCCCCCCHHHHHHHHHhh
Confidence 0 0 136899999999999999999876
No 161
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=99.87 E-value=1.2e-20 Score=195.81 Aligned_cols=295 Identities=12% Similarity=0.037 Sum_probs=190.2
Q ss_pred hhHHHHHHHHHHHHHHcCCCCC---cccEEE--cCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHH----HcCC
Q 011842 136 HSRQFEVGVLDWFARLWELENN---EYWGYI--TNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAAR----MYRM 206 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~---~~~g~~--t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~----~~G~ 206 (476)
+..++++++.+++ +|.+.. +.++++ |+|||+|+..++.......|++.|++++++|.++...++ ..|+
T Consensus 95 G~~~lr~~ia~~l---~g~~~~~~~~~~i~~~~t~ggt~al~l~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~~~~~G~ 171 (448)
T 3meb_A 95 GFPLFLEAAQFLM---FGKDSKAAQEGRIASCQSLSGTGSLHIGFEFLHLWMPKAEFYMPSTTWPNHYGIYDKVFNKLKV 171 (448)
T ss_dssp CCHHHHHHHHHHH---HCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCTHHHHHHHHHHCTTTS
T ss_pred chHHHHHHHHHHh---cCCCccccCcCcEEEEECCcHHHHHHHHHHHHHHhCCCCEEEECCCCCHhHHHHHHhhHHhCCC
Confidence 4567877777776 366521 235888 999999998754332223489999999999999999999 8999
Q ss_pred eEEEEeC-CCC--CccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCccc
Q 011842 207 ECVKVDC-LIS--GEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFG 280 (476)
Q Consensus 207 ~v~~v~~-~~~--g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g 280 (476)
+++.+|+ +++ +.+|+++|++++.+......+++++++.|+||.+.+ +++|+++|++||+ ++++|++|.+
T Consensus 172 ~v~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~-----~li~Deay~~ 246 (448)
T 3meb_A 172 PYKEYTYLRKDGELEIDFSNTKKDIQSAPEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKH-----IAFFDSAYQG 246 (448)
T ss_dssp CCEEECCBCTTSCSSBCHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTC-----EEEEEESCTT
T ss_pred eEEEEeccccccCCCcCHHHHHHHHHhCCCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCC-----EEEEeccccc
Confidence 9999998 654 789999999999864333457788889999999865 6669999999999 9999999987
Q ss_pred ccccccc-cCCCCC-C-ccc-ccEEEEcCCCCCC-CCCCceeE--Ee--------eh-----hhhhhhcCCccccCCCCC
Q 011842 281 LMMPFVK-KAPKVS-F-KKP-IGSVSVSGHKFVG-CPMPCGVQ--IT--------RM-----EHINVLSSNVEYLASRDA 340 (476)
Q Consensus 281 ~~~~~~~-~~~~~~-~-~~~-~Dsi~~s~hK~l~-~p~~~G~l--~~--------~~-----~~~~~l~~~~~yl~~~~~ 340 (476)
+...... ....+. + ... -.+++.|++|.++ .++++|++ ++ ++ ++++.+.....+.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~~~~~~~~l~~~l~~~~~~~----- 321 (448)
T 3meb_A 247 FATGSFEADAFAVRMFVDAGVEVLVAQSFSKNFGLYGERIGCLHVVHAGVEGSVEKNKALSAAMVSGMTLQIRKT----- 321 (448)
T ss_dssp TSSSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGGCCEEEEEECCCCSSSHHHHHHHHHHHHHHHHHHHHTT-----
T ss_pred ccCCCcccCchhHHHHhhcCCcEEEEecccccCCCccccceeeeeeeccccccccCCHHHHHHHHHHHHHHHhcc-----
Confidence 6543110 000000 0 011 2356888999887 57889998 66 44 3333332111111
Q ss_pred cccCCCCChhHHHHHHHHHHhCh--------hcHHHHHHHHHHHHHHHHHHHHhcCCe--------EeecCCeeEEEEec
Q 011842 341 TIMGSRNGHAPIFLWYTLNRKGY--------KGFQKEVQKCLRNAHYLKDRLLDAGIS--------AMLNELSSTVVFER 404 (476)
Q Consensus 341 ~~~~sr~~~~~l~~~~~l~~~g~--------~g~~~~~~~~~~~a~~l~~~L~~~g~~--------~~~~~~~~iv~f~~ 404 (476)
..+ ...+.++++...+.. +.+++..++..+++++|.+.|++.+.. ....+...++.|..
T Consensus 322 --~~~---~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 396 (448)
T 3meb_A 322 --WSM---SAIHGAYIVQVIVHDKRLLQMFYDNVKEMSARIHRMRSLLHASLAKRKTPGPGSKGTWDHILTAIGMFTFTG 396 (448)
T ss_dssp --TSS---CCHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSTTTCCCTHHHHCCSSEEECC
T ss_pred --cCC---ccHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCcccccceeCCCceEEEecC
Confidence 001 123444444444432 336677788889999999999987422 12223333344432
Q ss_pred CCcH---HHhhceeecccCCEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Q 011842 405 PQDE---EFVRRWQLACQGNIAHVVVMPNVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 405 ~~~~---~~~~~~~l~~~~~~lRv~~~~~~T~edid~~~~~l~~~~~~ 449 (476)
-..+ .+.++..+....+..|+++.. .|.++|++++++|.++.++
T Consensus 397 ~~~~~~~~ll~~~gV~v~~G~gRis~a~-~~~~~i~~~~~~l~~~l~~ 443 (448)
T 3meb_A 397 LTPEHVDYLKEKWSIYLVKAGGRMSMCG-LTESNCDYVAEAIHDAVTK 443 (448)
T ss_dssp CCHHHHHHHHHHHCEEECSGGGEEEGGG-CCTTTHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhCCEEEeCCCcEEEEec-CCHHHHHHHHHHHHHHHHh
Confidence 2221 122222222221113888753 4666799999999998763
No 162
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=99.87 E-value=3.3e-21 Score=197.26 Aligned_cols=299 Identities=11% Similarity=-0.007 Sum_probs=193.7
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEE--cCCchhHHHHHHHHHHhhCCC-----cEEEecCCCchHHHHHHHHcCCe-
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYI--TNCGTEGNLHGILVGREVFPD-----GILYASRESHYSVFKAARMYRME- 207 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~--t~ggt~An~~al~aa~~~~p~-----~~Vl~s~~~H~S~~~~~~~~G~~- 207 (476)
+..++++++.+++....|.+.+...+++ |+||++|+..++..+....|+ +.|+++.++|.++...++..|++
T Consensus 75 g~~~lr~~la~~~~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~p~y~~~~~~~~~~g~~~ 154 (412)
T 1ajs_A 75 GLAEFRTCASRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKD 154 (412)
T ss_dssp CCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHHHHHHTTCSC
T ss_pred CCHHHHHHHHHHHhcCCCCccCCCcEEEEECCCcHHHHHHHHHHHHHhCcCcCCCCCeEEEcCCCcHHHHHHHHHcCCce
Confidence 4568888887777544443211234889 999999999987544333388 89999999999999999999999
Q ss_pred EEEEeCC--CCCccCHHHHHHHHHcCCCCcEEEEEeeCCCcccccc---CHHHHHHHHHHhCCCCCceEEEEecCccccc
Q 011842 208 CVKVDCL--ISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVD---DLDLVIQTLEESGFTQDRFYIHCDGALFGLM 282 (476)
Q Consensus 208 v~~v~~~--~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id---~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~ 282 (476)
++.+|.+ .++.+|+++|++++.+...+..+++++++.|+||.+. ++++|+++|++||+ ++++|++|.++.
T Consensus 155 ~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~-----~li~De~y~~~~ 229 (412)
T 1ajs_A 155 IRSYRYWDTEKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFL-----FPFFDSAYQGFA 229 (412)
T ss_dssp EEEEECEETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTC-----EEEEEESCTTTT
T ss_pred eEEEeeecCCCCccCHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCC-----EEEEEccccccc
Confidence 9999984 4678999999999986433345777789999999984 57789999999999 999999987654
Q ss_pred ccc--cccCCCCCCcc-c-ccEEEEcCCCCCCC-CCCceeEEe---ehhhhh----hhcCCccccCCCCCcccCCCCChh
Q 011842 283 MPF--VKKAPKVSFKK-P-IGSVSVSGHKFVGC-PMPCGVQIT---RMEHIN----VLSSNVEYLASRDATIMGSRNGHA 350 (476)
Q Consensus 283 ~~~--~~~~~~~~~~~-~-~Dsi~~s~hK~l~~-p~~~G~l~~---~~~~~~----~l~~~~~yl~~~~~~~~~sr~~~~ 350 (476)
... ....+...+.. . -+++..+++|.++. ++++|++++ +++.++ .+.....+ +..+ .+...
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~-~~~~~ 302 (412)
T 1ajs_A 230 SGNLEKDAWAIRYFVSEGFELFCAQSFSKNFGLYNERVGNLTVVAKEPDSILRVLSQMQKIVRV------TWSN-PPAQG 302 (412)
T ss_dssp TSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHT------TTSS-CCSHH
T ss_pred CCcccccchHHHHHhccCCcEEEEEecccccCCCCcceEEEEEecCCHHHHHHHHHHHHHHHhc------ccCC-CChHH
Confidence 421 01100000111 1 23778899998886 778999999 665322 22110111 1111 12122
Q ss_pred HHHHHHHHHHhC-----hhcHHHHHHHHHHHHHHHHHHHHhcC----CeEeecCCeeEEEEecCCcHHH---hhceeecc
Q 011842 351 PIFLWYTLNRKG-----YKGFQKEVQKCLRNAHYLKDRLLDAG----ISAMLNELSSTVVFERPQDEEF---VRRWQLAC 418 (476)
Q Consensus 351 ~l~~~~~l~~~g-----~~g~~~~~~~~~~~a~~l~~~L~~~g----~~~~~~~~~~iv~f~~~~~~~~---~~~~~l~~ 418 (476)
...+..+++... .+.+++..++..++++++.+.|++.+ +.. ..+...++.|...+...+ .++..+..
T Consensus 303 ~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~gv~v 381 (412)
T 1ajs_A 303 ARIVARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEALKTPGTWNH-ITDQIGMFSFTGLNPKQVEYLINQKHIYL 381 (412)
T ss_dssp HHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCHH-HHHCCSSEEECCCCHHHHHHHHHTTCEEC
T ss_pred HHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCeeE-EcCCCceEEEeCCCHHHHHHHHHhCCEEe
Confidence 222222332211 23567788888999999999999876 432 233333333432222211 11112211
Q ss_pred cCCEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Q 011842 419 QGNIAHVVVMPNVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 419 ~~~~lRv~~~~~~T~edid~~~~~l~~~~~~ 449 (476)
.. .+|++++. +|++++++++++|+++.++
T Consensus 382 ~~-~~Ris~~~-~~~~~i~~~~~~l~~~l~~ 410 (412)
T 1ajs_A 382 LP-SGRINMCG-LTTKNLDYVATSIHEAVTK 410 (412)
T ss_dssp CT-TSEEEGGG-CCTTTHHHHHHHHHHHHHH
T ss_pred cC-CcEEEeee-CCHHHHHHHHHHHHHHHHh
Confidence 11 26988873 5899999999999988754
No 163
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=99.87 E-value=3.2e-20 Score=185.73 Aligned_cols=267 Identities=13% Similarity=0.009 Sum_probs=187.8
Q ss_pred HHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeC-CCCCccCH
Q 011842 143 GVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDC-LISGEIDC 221 (476)
Q Consensus 143 ~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~-~~~g~~D~ 221 (476)
++++++++++|.+++ .+++|+|+|+|+..++.+.. ++.|+++.++|.++...++..|++++.+|+ ++++.+++
T Consensus 54 ~lr~~la~~~~~~~~--~i~~t~g~~~al~~~~~~l~----gd~Vi~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~ 127 (350)
T 3fkd_A 54 TLRQMLAKRNSVDNN--AILVTNGPTAAFYQIAQAFR----GSRSLIAIPSFAEYEDACRMYEHEVCFYPSNEDIGEADF 127 (350)
T ss_dssp HHHHHHHHHTTCCGG--GEEEESHHHHHHHHHHHHTT----TCEEEEEESCCHHHHHHHHHTTCEEEEEETTSCGGGSCC
T ss_pred HHHHHHHHHhCcCHH--HEEEcCCHHHHHHHHHHHHC----CCEEEEeCCCcHHHHHHHHHcCCeEEEEecCCccccCcc
Confidence 456667788888643 59999999999998887764 889999999999999999999999999999 65455655
Q ss_pred HHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhC-CCCCceEEEEecCcccccccccccCCCCCCcc-ccc
Q 011842 222 ADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESG-FTQDRFYIHCDGALFGLMMPFVKKAPKVSFKK-PIG 299 (476)
Q Consensus 222 ~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g-~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~-~~D 299 (476)
++++ +|++++++|++|.+.|+++|.++++.++ . ++++|++|+.+........ ..... ..+
T Consensus 128 --------~~~~---~v~i~~p~nptG~~~~~~~l~~l~~~~~~~-----~li~Dea~~~~~~~~~~~~--~~~~~~~~~ 189 (350)
T 3fkd_A 128 --------SNMD---FCWLCNPNNPDGRLLQRTEILRLLNDHPDT-----TFVLDQSYVSFTTEEVIRP--ADIKGRKNL 189 (350)
T ss_dssp --------TTCS---EEEEESSCTTTCCCCCHHHHHHHHHHCTTS-----EEEEECTTTTSCSSCCCCG--GGGTTCSSE
T ss_pred --------CCCC---EEEEeCCCCCcCCCCCHHHHHHHHHhCCCC-----EEEEECchhhhccCcchhh--HHhhcCCCE
Confidence 3343 7778899999999999999999999987 6 9999999976543221111 11111 245
Q ss_pred EEEEcCCCCCC-CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhc-HHHHHHHHHHHH
Q 011842 300 SVSVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKG-FQKEVQKCLRNA 377 (476)
Q Consensus 300 si~~s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g-~~~~~~~~~~~a 377 (476)
++..|++|+++ .++++|++++++++++.+...... .+ ...+.++++...+.... +.+.+++..+++
T Consensus 190 i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~---------~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 257 (350)
T 3fkd_A 190 VMVYSFSHAYGIPGLRIGYIVANKDFMKRVAAFSTP---------WA---VNALAIEAAKFILIHPAQFTLPIRKWQRNT 257 (350)
T ss_dssp EEEEESHHHHSCGGGCCEEEECCHHHHHHHHTTCCT---------TC---SCHHHHHHHHHHHHCTTTTCCCHHHHHHHH
T ss_pred EEEecCchhccCcchheEeEEeCHHHHHHHHHhCCC---------CC---CCHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 77889999887 778999999987776665432211 11 12344444444442222 333444445888
Q ss_pred HHHHHHHHhcCCeEeecCCeeEEEEecCC--cHHHh------hceeecc-------cCCEEEEEEcCCCCHHHHHHHHHH
Q 011842 378 HYLKDRLLDAGISAMLNELSSTVVFERPQ--DEEFV------RRWQLAC-------QGNIAHVVVMPNVTIDKLDDFLNE 442 (476)
Q Consensus 378 ~~l~~~L~~~g~~~~~~~~~~iv~f~~~~--~~~~~------~~~~l~~-------~~~~lRv~~~~~~T~edid~~~~~ 442 (476)
+++.+.|++.+...+.++.++++.+..+. ..++. ++..+.. ..+.+|+++. +.+++|+++++
T Consensus 258 ~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gi~v~~g~~f~~~~~~~iRis~~---~~~~~~~l~~a 334 (350)
T 3fkd_A 258 VDFITALNRLDGVEVHPSGTTFFLLRLKKGTAAELKKYMLEEYNMLIRDASNFRGLDESYVRITTQ---RPAQNQLFIKA 334 (350)
T ss_dssp HHHHHHHHHSTTEEECCCSSSEEEEEESSSCHHHHHHHHHHTTCEECEECTTSTTCCTTEEEEECC---CHHHHHHHHHH
T ss_pred HHHHHHHhcCCCcEECCCCCcEEEEECCCCCHHHHHHHHHHHCCEEEEeCccCCCCCCCEEEEEcC---CHHHHHHHHHH
Confidence 99999999884444555666666666653 22322 2333321 1578999875 89999999999
Q ss_pred HHHHHH
Q 011842 443 LIENRS 448 (476)
Q Consensus 443 l~~~~~ 448 (476)
|+++.+
T Consensus 335 l~~~~~ 340 (350)
T 3fkd_A 335 LETFLE 340 (350)
T ss_dssp HHHHHT
T ss_pred HHHHHH
Confidence 988754
No 164
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.87 E-value=4.1e-20 Score=188.35 Aligned_cols=213 Identities=14% Similarity=0.051 Sum_probs=162.1
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHH----HHHcCCeEEEEeCC
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKA----ARMYRMECVKVDCL 214 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~----~~~~G~~v~~v~~~ 214 (476)
....++++++++++|.+ ..+++++|++|+..++.++.. +++.|+++.+.|.+.... ++..|++++.++.+
T Consensus 59 ~~~~~l~~~la~~~g~~----~~i~~~sG~~ai~~~~~~~~~--~gd~vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~ 132 (389)
T 3acz_A 59 PTVEQFEEMVCSIEGAA----GSAAFGSGMGAISSSTLAFLQ--KGDHLIAGDTLYGCTVSLFTHWLPRFGIEVDLIDTS 132 (389)
T ss_dssp HHHHHHHHHHHHHHTCS----EEEEESSHHHHHHHHHTTTCC--TTCEEEEESSCCHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred hHHHHHHHHHHHHhCCC----eEEEeCCHHHHHHHHHHHHhC--CCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECCC
Confidence 45566777888888886 277888899999988877644 899999999999987665 57789999999874
Q ss_pred CCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCC
Q 011842 215 ISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSF 294 (476)
Q Consensus 215 ~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~ 294 (476)
|+++|+++|++++ .+|++++++|++|.+.|+++|+++|++||+ ++++|++|+.+... .. ++
T Consensus 133 -----d~~~l~~~i~~~~---~~v~~~~~~nptG~~~~l~~i~~~~~~~~~-----~livD~~~~~~~~~--~~---~~- 193 (389)
T 3acz_A 133 -----DVEKVKAAWKPNT---KMVYLESPANPTCKVSDIKGIAVVCHERGA-----RLVVDATFTSPCFL--KP---LE- 193 (389)
T ss_dssp -----CHHHHHHTCCTTE---EEEEEESSCTTTCCCCCHHHHHHHHHHHTC-----EEEEECTTTCTTTC--CG---GG-
T ss_pred -----CHHHHHHhcCCCC---eEEEEECCCCCCCeecCHHHHHHHHHHcCC-----EEEEECCCcccccc--Cc---cc-
Confidence 8999999987654 488889999999999999999999999999 99999999866431 11 22
Q ss_pred cccccEEEEcCCCCCCCCCC--ceeEEeeh-hhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHH
Q 011842 295 KKPIGSVSVSGHKFVGCPMP--CGVQITRM-EHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQ 371 (476)
Q Consensus 295 ~~~~Dsi~~s~hK~l~~p~~--~G~l~~~~-~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~ 371 (476)
..+|+++.|+||++++|.. +|++++++ ++++.+.....+. ++. ..++..|++++.+ +.+..+++
T Consensus 194 -~~~di~~~S~sK~~~~~~~~~~G~v~~~~~~~~~~l~~~~~~~--------g~~--~~~~~~~~~~~~l--~~l~~r~~ 260 (389)
T 3acz_A 194 -LGADIALHSVSKYINGHGDVIGGVSSAKTAEDIATIKFYRKDA--------GSL--MAPMDAFLCARGM--KTLPIRMQ 260 (389)
T ss_dssp -TTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHH--------CCC--CCHHHHHHHHHHH--TTHHHHHH
T ss_pred -cCCeEEEECChhhccCCCCceeEEEEECcHHHHHHHHHHHHhc--------CCC--CCHHHHHHHHcCc--cHHHHHHH
Confidence 2489999999999987765 59999998 7765553211111 111 1245566666554 45666778
Q ss_pred HHHHHHHHHHHHHHhcCC
Q 011842 372 KCLRNAHYLKDRLLDAGI 389 (476)
Q Consensus 372 ~~~~~a~~l~~~L~~~g~ 389 (476)
+..++++.+.+.|++.+.
T Consensus 261 ~~~~~~~~l~~~l~~~~~ 278 (389)
T 3acz_A 261 IHMENGLKVAKFLEQHEK 278 (389)
T ss_dssp HHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHHcCCC
Confidence 888888999999988653
No 165
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=99.87 E-value=1.9e-21 Score=197.67 Aligned_cols=291 Identities=12% Similarity=0.002 Sum_probs=191.7
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEE--cCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeC
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYI--TNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDC 213 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~--t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~ 213 (476)
+..++++++.+++.+..+.+.++..+++ |+||++|+..++.+++...|++.|+++.++|.++...++..|++++.+|.
T Consensus 70 g~~~lr~~la~~~~~~~~~~~~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~ 149 (396)
T 2q7w_A 70 GIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAY 149 (396)
T ss_dssp CCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHSCCCEEEEEESCCTHHHHHHHHTTCEEEEEEC
T ss_pred CCHHHHHHHHHHHhcCCCCccccccEEEEecccchhhHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHcCCceEEEec
Confidence 3468888888777543221101124777 99999999998877654348999999999999999999999999999998
Q ss_pred C--CCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCccccccccc-c
Q 011842 214 L--ISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFV-K 287 (476)
Q Consensus 214 ~--~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~-~ 287 (476)
+ +++.+|+++|++++.+.+.+..+++++++.|+||.+.+ +++|+++|++||+ ++++|++|+++..... .
T Consensus 150 ~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~-----~li~De~~~~~~~~~~~~ 224 (396)
T 2q7w_A 150 YDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGW-----LPLFDFAYQGFARGLEED 224 (396)
T ss_dssp EETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTC-----EEEEEESCTTSSSCHHHH
T ss_pred ccCCCCCcCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCC-----EEEEecccccccCCccch
Confidence 5 56889999999999764323457777899999999854 6689999999999 9999999987644210 1
Q ss_pred cCCCCCCcc-c-ccEEEEcCCCCCC-CCCCceeEEe---ehh----hhhhhcCCccccCCCCCcccCCCCChhHHHHHHH
Q 011842 288 KAPKVSFKK-P-IGSVSVSGHKFVG-CPMPCGVQIT---RME----HINVLSSNVEYLASRDATIMGSRNGHAPIFLWYT 357 (476)
Q Consensus 288 ~~~~~~~~~-~-~Dsi~~s~hK~l~-~p~~~G~l~~---~~~----~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~ 357 (476)
..+...+.. . .++++.+++|+++ .++++|++++ +++ +.+.+.....+ +.. + ...+.++++
T Consensus 225 ~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~------~~~-~---~~~~~~~a~ 294 (396)
T 2q7w_A 225 AEGLRAFAAMHKELIVASSYSXNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRA------NYS-N---PPAHGASVV 294 (396)
T ss_dssp THHHHHHHHHCSCEEEEEECTTTTTCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHT------TTS-S---CCHHHHHHH
T ss_pred hHHHHHHHhcCCcEEEEEeccccccccccccceEEEEcCCHHHHHHHHHHHHHHHhh------ccC-C---CCcHHHHHH
Confidence 000000111 1 3467889999998 6788999997 443 33322110001 001 1 123444444
Q ss_pred HHHhCh--------hcHHHHHHHHHHHHHHHHHHHHhcC----CeEeecCCeeEEEEecCCcHHH---h--hceeecccC
Q 011842 358 LNRKGY--------KGFQKEVQKCLRNAHYLKDRLLDAG----ISAMLNELSSTVVFERPQDEEF---V--RRWQLACQG 420 (476)
Q Consensus 358 l~~~g~--------~g~~~~~~~~~~~a~~l~~~L~~~g----~~~~~~~~~~iv~f~~~~~~~~---~--~~~~l~~~~ 420 (476)
...+.. +.+++..++..++++++.+.|++.+ +. +.++..+++.|...+...+ . +++.+..
T Consensus 295 ~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~~-- 371 (396)
T 2q7w_A 295 ATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFS-FIIKQNGMFSFSGLTKEQVLRLREEFGVYAVA-- 371 (396)
T ss_dssp HHHHTSHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHTTCCSCCT-HHHHCCSSEEECCCCHHHHHHHHHHHCEECCT--
T ss_pred HHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcc-eecCCCceEEEecCCHHHHHHHHHhcCeeecC--
Confidence 444432 3456667788889999999999886 33 2233333334432222211 1 2222222
Q ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHH
Q 011842 421 NIAHVVVMPNVTIDKLDDFLNELIEN 446 (476)
Q Consensus 421 ~~lRv~~~~~~T~edid~~~~~l~~~ 446 (476)
.+|+++.. .|++++++++++|+++
T Consensus 372 -~~Ris~~~-~~~e~i~~~~~~l~~~ 395 (396)
T 2q7w_A 372 -SGRVNVAG-MTPDNMAPLCEAIVAV 395 (396)
T ss_dssp -TCEEEGGG-CCTTTHHHHHHHHHHH
T ss_pred -CceEEEee-cCHHHHHHHHHHHHhc
Confidence 26998874 4999999999999865
No 166
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.86 E-value=3.1e-20 Score=189.33 Aligned_cols=283 Identities=11% Similarity=0.037 Sum_probs=183.7
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhh------CCCcEEEecCCCchHH-HHHHHHcC------
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREV------FPDGILYASRESHYSV-FKAARMYR------ 205 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~------~p~~~Vl~s~~~H~S~-~~~~~~~G------ 205 (476)
+...++++++++++|.+ .+++|+|||+|+..++.+++.. ..++.|++.++.|... ..+....+
T Consensus 81 ~~~~~l~~~la~~~~~~----~v~~~~gg~~a~~~al~~~~~~~~~~~~~g~~~vi~~~~~y~~~~~~~~~~~~~~~~~~ 156 (406)
T 4adb_A 81 EPVLRLAKKLIDATFAD----RVFFCNSGAEANEAALKLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQ 156 (406)
T ss_dssp HHHHHHHHHHHHHSSCS----EEEEESSHHHHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCGGGTG
T ss_pred HHHHHHHHHHHhhCCCC----eEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCcHHHhhccCCccccc
Confidence 55677888899999865 3999999999999999887652 2336677666666554 34433333
Q ss_pred ------CeEEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccc-----cCHHHHHHHHHHhCCCCCceEEEE
Q 011842 206 ------MECVKVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAV-----DDLDLVIQTLEESGFTQDRFYIHC 274 (476)
Q Consensus 206 ------~~v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~i-----d~l~~I~~ia~~~g~~~~~~~lhv 274 (476)
.++..+|.+ |+++|++++.++ +.+|+++ +.+++|.+ +++++|.++|++||+ ++|+
T Consensus 157 ~~~~~~~~~~~~~~~-----d~~~l~~~l~~~---~~~v~~~-p~np~g~~~~~~~~~l~~l~~l~~~~~~-----~li~ 222 (406)
T 4adb_A 157 DFAPLPADIRHAAYN-----DINSASALIDDS---TCAVIVE-PIQGEGGVVPASNAFLQGLRELCNRHNA-----LLIF 222 (406)
T ss_dssp GGCSCCSSEEEECTT-----CHHHHHTTCSTT---EEEEEEC-SEETTTTSEECCHHHHHHHHHHHHHTTC-----EEEE
T ss_pred cCCCCCCCceEeCCC-----cHHHHHHHhcCC---eEEEEEe-CCcCCCCCccCCHHHHHHHHHHHHHcCC-----EEEE
Confidence 245555544 899999988643 3477777 77787754 579999999999999 9999
Q ss_pred ecCcccccccccccCCCCCCcc-cccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHH
Q 011842 275 DGALFGLMMPFVKKAPKVSFKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIF 353 (476)
Q Consensus 275 D~a~~g~~~~~~~~~~~~~~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~ 353 (476)
|++|+++.... .... .+... ..|++++ +|++++++++|+++.++++++.+...... .+ .+. ..+.
T Consensus 223 De~~~~~~~~g-~~~~-~~~~~~~~d~~t~--sK~~~~G~r~G~~~~~~~~~~~~~~~~~~-----~~--~~~---~~~~ 288 (406)
T 4adb_A 223 DEVQTGVGRTG-ELYA-YMHYGVTPDLLTT--AKALGGGFPVGALLATEECARVMTVGTHG-----TT--YGG---NPLA 288 (406)
T ss_dssp ECTTTTTTTTS-SSSH-HHHHTCCCSEEEE--CGGGGTTSCCEEEEECHHHHHTCCTTSSC-----CS--STT---CHHH
T ss_pred eccccCCCccc-hhHH-HHhcCCCCCEEEe--chhhcCCCCeEEEEEcHHHHhhhccCCcC-----CC--CCC---CHHH
Confidence 99997543221 1100 01111 2577754 89998888999999998877655322111 11 111 1334
Q ss_pred HHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCC----eEeecCCeeEEEEecCC-----cHHHh-----hceee-cc
Q 011842 354 LWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGI----SAMLNELSSTVVFERPQ-----DEEFV-----RRWQL-AC 418 (476)
Q Consensus 354 ~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~----~~~~~~~~~iv~f~~~~-----~~~~~-----~~~~l-~~ 418 (476)
+++++..+.....++..++..++++++.+.|++.+. .........++.+..+. ..++. +++.+ +.
T Consensus 289 ~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~ 368 (406)
T 4adb_A 289 SAVAGKVLELINTPEMLNGVKQRHDWFVERLNTINHRYGLFSEVRGLGLLIGCVLNADYAGQAKQISQEAAKAGVMVLIA 368 (406)
T ss_dssp HHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEETTEEEEEECTTTTTCHHHHHHHHHHTTEECEES
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEEEEEEEEEEeCCcHHHHHHHHHHHHHCCcEEeec
Confidence 443333331111167778888899999999887531 11111223455555443 22332 23333 33
Q ss_pred cCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhc
Q 011842 419 QGNIAHVVVMPNVTIDKLDDFLNELIENRSTWYED 453 (476)
Q Consensus 419 ~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~~~ 453 (476)
..+.+|++++..+|+++|++++++|+++.+++.++
T Consensus 369 ~~~~iRi~~~~~~~~e~i~~~~~~l~~~l~~~~~~ 403 (406)
T 4adb_A 369 GGNVVRFAPALNVSEEEVTTGLDRFAAACEHFVSR 403 (406)
T ss_dssp STTEEEECCCTTCCHHHHHHHHHHHHHHHHHHHC-
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence 45899999999999999999999999998877643
No 167
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.86 E-value=7e-21 Score=192.08 Aligned_cols=282 Identities=13% Similarity=0.037 Sum_probs=188.1
Q ss_pred HHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCC-CccC
Q 011842 142 VGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLIS-GEID 220 (476)
Q Consensus 142 ~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~-g~~D 220 (476)
.++++.+++++|.+ .+++|+|||+|+..++.++. ..|++.|+++.++|.++..+++..|++++.++++++ +.+|
T Consensus 38 ~~l~~~la~~~~~~----~~~~~~sGt~al~~al~~~~-~~~gd~Vi~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~d 112 (367)
T 3nyt_A 38 TELEDRLADFVGAK----YCISCANGTDALQIVQMALG-VGPGDEVITPGFTYVATAETVALLGAKPVYVDIDPRTYNLD 112 (367)
T ss_dssp HHHHHHHHHHHTCS----EEEEESCHHHHHHHHHHHTT-CCTTCEEEEESSSCTHHHHHHHHTTCEEEEECBCTTTCSBC
T ss_pred HHHHHHHHHHhCCC----cEEEeCCHHHHHHHHHHHhC-CCCcCEEEECCCccHHHHHHHHHcCCEEEEEecCCccCCcC
Confidence 34455577777875 38999999999999998873 238999999999999999999999999999999865 8999
Q ss_pred HHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCcccccE
Q 011842 221 CADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKPIGS 300 (476)
Q Consensus 221 ~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~~Ds 300 (476)
+++|+++|++++ .+|+ +++++|...|+++|.++|++||+ ++|+|++|+.+......... .+ .|+
T Consensus 113 ~~~l~~~i~~~~---~~v~---~~~~~G~~~~~~~i~~la~~~~~-----~li~D~a~~~g~~~~~~~~~--~~---~di 176 (367)
T 3nyt_A 113 PQLLEAAITPRT---KAII---PVSLYGQCADFDAINAIASKYGI-----PVIEDAAQSFGASYKGKRSC--NL---STV 176 (367)
T ss_dssp GGGTGGGCCTTE---EEEC---CBCGGGCCCCHHHHHHHHHHTTC-----CBEEECTTTTTCEETTEETT--SS---SSE
T ss_pred HHHHHHhcCcCC---cEEE---eeCCccChhhHHHHHHHHHHcCC-----EEEEECccccCCeECCeecc--CC---CCE
Confidence 999999986543 3554 55688999999999999999999 99999999744321111111 11 277
Q ss_pred EEEc--CCCCCCCCCCceeEEeehh-hhhhhcCCccccCCCC--CcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHHH
Q 011842 301 VSVS--GHKFVGCPMPCGVQITRME-HINVLSSNVEYLASRD--ATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLR 375 (476)
Q Consensus 301 i~~s--~hK~l~~p~~~G~l~~~~~-~~~~l~~~~~yl~~~~--~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~ 375 (476)
+++| +||+++++...|+++.+++ +.+.+.....+-.... ....+.......+..++++..+ +.+++..++..+
T Consensus 177 ~~~Sf~~~K~l~~~g~gg~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~l--~~~~~~~~~~~~ 254 (367)
T 3nyt_A 177 ACTSFFPSAPLGCYGDGGAIFTNDDELATAIRQIARHGQDRRYHHIRVGVNSRLDTLQAAILLPKL--EIFEEEIALRQK 254 (367)
T ss_dssp EEEECCTTSSSCCSSCCEEEEESCHHHHHHHHHHTBTTEEETTEECSCCCBCCCCHHHHHHHHHHH--HTHHHHHHHHHH
T ss_pred EEEECCCCCcCCCcCceeEEEeCCHHHHHHHHHHHhcCCCcCceeeccCcCCCccHHHHHHHHHHH--HHHHHHHHHHHH
Confidence 7777 5899987334778887654 4433321111100000 0011112122344444444433 456778888899
Q ss_pred HHHHHHHHHHhcCCeEeecC-C----eeEEEEecCCcHHHhh-----ceee------cc-------------------cC
Q 011842 376 NAHYLKDRLLDAGISAMLNE-L----SSTVVFERPQDEEFVR-----RWQL------AC-------------------QG 420 (476)
Q Consensus 376 ~a~~l~~~L~~~g~~~~~~~-~----~~iv~f~~~~~~~~~~-----~~~l------~~-------------------~~ 420 (476)
+++++.+.|++.++.....+ . ..++.+..++.+.+.+ ++.+ +. ..
T Consensus 255 ~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~GI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (367)
T 3nyt_A 255 VAAEYDLSLKQVGIGTPFIEVNNISVYAQYTVRMDNRESVQASLKAAGVPTAVHYPIPLNKQPAVADEKAKLPVGDKAAT 334 (367)
T ss_dssp HHHHHHHHHHHTTCCCCCCCTTEECCCSSEEEECSSHHHHHHHHHHHTCCCBCSCSSCGGGSGGGCCTTCCCHHHHHHHH
T ss_pred HHHHHHHHhccCCeeccCCCCCCceeeEEEEEEeCCHHHHHHHHHHCCCceeccCCCccccChhhhccCCCChHHHHHHh
Confidence 99999999999875433221 1 1233444443333221 1111 10 02
Q ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHH
Q 011842 421 NIAHVVVMPNVTIDKLDDFLNELIEN 446 (476)
Q Consensus 421 ~~lRv~~~~~~T~edid~~~~~l~~~ 446 (476)
..+|+.+++.+|++||+++++.|++.
T Consensus 335 ~~l~lp~~~~~t~~~i~~v~~~~~~~ 360 (367)
T 3nyt_A 335 QVMSLPMHPYLDTASIKIICAALTNL 360 (367)
T ss_dssp HEEEECCCTTCCHHHHHHHHHHHHC-
T ss_pred CeEEccCCCCCCHHHHHHHHHHHHHH
Confidence 57899999999999999999998754
No 168
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=99.86 E-value=5.7e-20 Score=189.10 Aligned_cols=290 Identities=9% Similarity=-0.079 Sum_probs=191.6
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHH--HHHHHHHhhCC------------CcEEEecCCCchHHHHHH
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNL--HGILVGREVFP------------DGILYASRESHYSVFKAA 201 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~--~al~aa~~~~p------------~~~Vl~s~~~H~S~~~~~ 201 (476)
+..++++++.+| ++++++ ++++|+|++++++ ..+.+... + ++.|+++.++|.++...+
T Consensus 77 G~~~lr~~ia~~----~~~~~~--~i~~t~G~~~al~l~~~~~~l~~--~~~~g~~~~~~~d~~~Vl~~~p~y~~~~~~~ 148 (422)
T 3d6k_A 77 GIADIRELWAEA----LGLPAD--LVVAQDGSSLNIMFDLISWSYTW--GNNDSSRPWSAEEKVKWLCPVPGYDRHFTIT 148 (422)
T ss_dssp CCHHHHHHHHHH----HTCCGG--GEEECSSCHHHHHHHHHHHHHHH--CCTTCSSCGGGSSCCEEEEEESCCHHHHHHH
T ss_pred CCHHHHHHHHHH----hCCChh--HEEEecchHHHHHHHHHHHHhcC--cccccccccccCCCCEEEEeCCccHHHHHHH
Confidence 355677765555 477643 5999999999973 44444443 3 347999999999999999
Q ss_pred HHcCCeEEEEeCCCCCccCHHHHHHHHHcCCCCcEEEE-EeeCCCccccccCHH---HHHHHHH-HhCCCCCceEEEEec
Q 011842 202 RMYRMECVKVDCLISGEIDCADFKAKLLQNKDKPAIIN-VNIGTTVKGAVDDLD---LVIQTLE-ESGFTQDRFYIHCDG 276 (476)
Q Consensus 202 ~~~G~~v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv-~t~gtt~tG~id~l~---~I~~ia~-~~g~~~~~~~lhvD~ 276 (476)
+..|++++.+|++++| +|+++|++++.+. ++.+|+ ++++.|+||.+.+.+ +|+++|+ +||+ ++++|+
T Consensus 149 ~~~g~~~~~v~~~~~g-~d~~~l~~~l~~~--~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~-----~li~De 220 (422)
T 3d6k_A 149 EHFGFEMINVPMTDEG-PDMGVVRELVKDP--QVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDF-----RIVWDN 220 (422)
T ss_dssp HHHTCEEEEEEEETTE-ECHHHHHHHHTST--TEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTC-----EEEEEC
T ss_pred HHcCCEEEecCCCCCC-CCHHHHHHHHhcC--CCeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhccCC-----EEEEEC
Confidence 9999999999997665 9999999999652 233555 578899999998866 7777787 8999 999999
Q ss_pred Cccc-ccccccc-cCCCCCC-----cccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCCh
Q 011842 277 ALFG-LMMPFVK-KAPKVSF-----KKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGH 349 (476)
Q Consensus 277 a~~g-~~~~~~~-~~~~~~~-----~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~ 349 (476)
+|+. .+..... ..+..+. ....+++..+++|+++.++++|++++++++++.+.....+. ..+.
T Consensus 221 ~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~GlriG~~~~~~~l~~~l~~~~~~~-------~~~~--- 290 (422)
T 3d6k_A 221 AYALHTLSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSKITHAGSGVSFFASSKENIEWYASHANVR-------GIGP--- 290 (422)
T ss_dssp TTTTCBSSSCCCCCCCHHHHHHHTTCTTCEEEEEESTTTSCTTSSCEEEECCHHHHHHHHHHHHHH-------CSCC---
T ss_pred CccccccCCCCCCCcChhhHhhccCCCCcEEEEcChhhhcCcccceEEEEeCHHHHHHHHHHHHhh-------cCCC---
Confidence 9973 2211111 1111110 11246778889999777789999999988766553222111 1111
Q ss_pred hHHHHHHHHHHhCh-h----cHHHHHHHHHHHHHHHHHHHHh----cCCeEe-ecCCeeEEEEecCC--cHHHh-----h
Q 011842 350 APIFLWYTLNRKGY-K----GFQKEVQKCLRNAHYLKDRLLD----AGISAM-LNELSSTVVFERPQ--DEEFV-----R 412 (476)
Q Consensus 350 ~~l~~~~~l~~~g~-~----g~~~~~~~~~~~a~~l~~~L~~----~g~~~~-~~~~~~iv~f~~~~--~~~~~-----~ 412 (476)
..+.++++...+.. . .+++..+++.++++++.+.|++ .|...+ .+...+.+.+..+. ...+. +
T Consensus 291 ~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~l~~~ 370 (422)
T 3d6k_A 291 NKLNQLAHAQFFGDVAGLKAHMLKHAASLAPKFERVLEILDSRLSEYGVAKWTSPTGGYFISVDVVPGTASRVVELAKEA 370 (422)
T ss_dssp CHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEECCCSBSSCEEEEESTTCHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCceEEeCCCcceEEEEECCCCCHHHHHHHHHHC
Confidence 24555555555543 2 2344445555566667776654 444333 33345666666653 22222 2
Q ss_pred ceeecc-----------cCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHh
Q 011842 413 RWQLAC-----------QGNIAHVVVMPNVTIDKLDDFLNELIENRSTWYE 452 (476)
Q Consensus 413 ~~~l~~-----------~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~~ 452 (476)
+..+.. ..+.+|+++.. +|+++++++++.|+++.+++.+
T Consensus 371 gV~v~~~g~~f~~~~~~~~~~iRis~~~-~~~e~i~~~~~~l~~~l~~~~~ 420 (422)
T 3d6k_A 371 GIALTGAGSSFPLHNDPNNENIRLAPSL-PPVAELEVAMDGFATCVLMAAL 420 (422)
T ss_dssp TEECCCTTTTSGGGCCTTSCEEEECCSS-SCHHHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEcCccccCCCCCCCCCeEEEecCC-CCHHHHHHHHHHHHHHHHHHHh
Confidence 233321 13678998877 8999999999999998877643
No 169
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.86 E-value=3.9e-20 Score=192.03 Aligned_cols=288 Identities=13% Similarity=0.083 Sum_probs=186.9
Q ss_pred HHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCc-hHHHHHHHHcCCeEEEEeCCC------
Q 011842 143 GVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESH-YSVFKAARMYRMECVKVDCLI------ 215 (476)
Q Consensus 143 ~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H-~S~~~~~~~~G~~v~~v~~~~------ 215 (476)
++++.+++++|.+ .+++|+|||+|+..++.++.. ||+ +++.++| .++..+++..|++++.+++++
T Consensus 79 ~l~~~la~~~~~~----~~~~~~~gt~a~~~al~~l~~--~gd--i~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~ 150 (456)
T 2ez2_A 79 HLERTVQELFGFK----HIVPTHQGRGAENLLSQLAIK--PGQ--YVAGNMYFTTTRYHQEKNGAVFVDIVRDEAHDAGL 150 (456)
T ss_dssp HHHHHHHHHHCCS----EEEEESSHHHHHHHHHHHHCC--TTC--EEEESSCCHHHHHHHHHTTCEEEECBCGGGGCTTC
T ss_pred HHHHHHHHHhCCC----cEEEeCCcHHHHHHHHHHhCC--CCC--EeccccccchhHHHHHHcCCEEEEecccccccccc
Confidence 3444566667765 389999999999999988854 788 6677888 888889999999999998863
Q ss_pred ----CCccCHHHHHHHHHcCC-CCcEEEEEeeCCC-ccccccC---HHHHHHHHHHhCCCCCceEEEEecCcccc-----
Q 011842 216 ----SGEIDCADFKAKLLQNK-DKPAIINVNIGTT-VKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGL----- 281 (476)
Q Consensus 216 ----~g~~D~~~Le~~l~~~~-~~p~~vv~t~gtt-~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~----- 281 (476)
++.+|+++|+++|++++ ..+.+|+++++.+ ++|.+.+ +++|+++|++||+ ++|+|++|+.+
T Consensus 151 ~~~~~~~~d~~~l~~~i~~~t~~~~~~v~l~~p~n~ptG~~~~~~~l~~i~~la~~~~i-----~li~De~~~~g~~~~~ 225 (456)
T 2ez2_A 151 NIAFKGDIDLKKLQKLIDEKGAENIAYICLAVTVNLAGGQPVSMANMRAVRELTEAHGI-----KVFYDATRCVENAYFI 225 (456)
T ss_dssp CCSCTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHTTC-----CEEEECTTHHHHHHHH
T ss_pred cccccCCCCHHHHHHHHHhccccceeEEEEeccCCCCCCccCCHHHHHHHHHHHHHcCC-----eEEEEccccccccccc
Confidence 26899999999998765 2235778887877 8998866 9999999999999 99999999753
Q ss_pred ----cccccccCCCC--CCcccccEEEEcCCCCCCCCCCceeEEee-hhhhhhhcCCccccCCCCCcccCCCCChhHHHH
Q 011842 282 ----MMPFVKKAPKV--SFKKPIGSVSVSGHKFVGCPMPCGVQITR-MEHINVLSSNVEYLASRDATIMGSRNGHAPIFL 354 (476)
Q Consensus 282 ----~~~~~~~~~~~--~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~-~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~ 354 (476)
..........+ ......|++++|+||+++.| .+|+++.+ +++++.+.....+..+ ..+..+ .+.. .+..
T Consensus 226 ~~~~~~~~g~~~~~~~~~~~~~~d~~~~S~kk~~~~~-~gG~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~-~~~a 301 (456)
T 2ez2_A 226 KEQEQGFENKSIAEIVHEMFSYADGCTMSGKKDCLVN-IGGFLCMNDDEMFSSAKELVVVYEG-MPSYGG-LAGR-DMEA 301 (456)
T ss_dssp HHHSTTCTTSCHHHHHHHHHTTCSEEEEETTTTTCCS-SCEEEEESCHHHHHHHHHHHHHHTC-CTTTTT-CCHH-HHHH
T ss_pred cccccccCCcchhhhhhhhcccCCEEEEeCcccCCCC-ceeEEEECCHHHHHHHHHHHhhccC-cccccC-cchh-HHHH
Confidence 11111100000 00122688888899998865 68888884 5555443221111100 000111 1111 1211
Q ss_pred HHHHHHhChhcH-HHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEec----C--CcHHH-----hh------ceee
Q 011842 355 WYTLNRKGYKGF-QKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFER----P--QDEEF-----VR------RWQL 416 (476)
Q Consensus 355 ~~~l~~~g~~g~-~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~----~--~~~~~-----~~------~~~l 416 (476)
+++... +.+ ++..++..++++++.+.|++.|+....+...+++.+.. + +..++ .+ +..+
T Consensus 302 -~a~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~ 378 (456)
T 2ez2_A 302 -MAIGLR--EAMQYEYIEHRVKQVRYLGDKLKAAGVPIVEPVGGHAVFLDARRFCEHLTQDEFPAQSLAASIYVETGVRS 378 (456)
T ss_dssp -HHHHHH--HHTCHHHHHHHHHHHHHHHHHHHHTTCCBCSSCCSSEEEEEHHHHTTTSCGGGCHHHHHHHHHHHHHSEEC
T ss_pred -HHHHHH--HHhHHHHHHHHHHHHHHHHHHHhcCCCccccCCCceEEEEEhHHhcCCCChhhccHHHHHHHHHHhcCeee
Confidence 122221 222 46677778888999999988776544444455555543 2 12222 21 2221
Q ss_pred -ccc-----------------CCEEEEEEcCC-CCHHHHHHHHHHHHHHHHHH
Q 011842 417 -ACQ-----------------GNIAHVVVMPN-VTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 417 -~~~-----------------~~~lRv~~~~~-~T~edid~~~~~l~~~~~~~ 450 (476)
+.. .+.+|+++... +|+++|++++++|+++.++.
T Consensus 379 ~~~g~~~~~~~~~~g~~~~~~~~~iRis~~~~~~t~e~i~~~~~~l~~~l~~~ 431 (456)
T 2ez2_A 379 MERGIISAGRNNVTGEHHRPKLETVRLTIPRRVYTYAHMDVVADGIIKLYQHK 431 (456)
T ss_dssp EEESHHHHCBCTTTCSBCCCSCCEEEEECCTTTCCHHHHHHHHHHHHHHHHTG
T ss_pred ecccccccccCccccccccCCCCeEEEEeCCCCCCHHHHHHHHHHHHHHHhhh
Confidence 211 26789998766 89999999999999987653
No 170
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.86 E-value=2.2e-20 Score=190.21 Aligned_cols=278 Identities=13% Similarity=0.087 Sum_probs=184.0
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhC----C-CcEEEecCCC-chHHHHHHHHcCCe-----
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVF----P-DGILYASRES-HYSVFKAARMYRME----- 207 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~----p-~~~Vl~s~~~-H~S~~~~~~~~G~~----- 207 (476)
+...++++++++++|.+ .+++|+|||+|+..++.+++... + ++.|++.++. |.++..+++..|.+
T Consensus 82 ~~~~~l~~~la~~~g~~----~v~~~~gg~~a~~~al~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~ 157 (397)
T 2ord_A 82 RPQMELAELLSKNTFGG----KVFFANTGTEANEAAIKIARKYGKKKSEKKYRILSAHNSFHGRTLGSLTATGQPKYQKP 157 (397)
T ss_dssp HHHHHHHHHHHHTTTSC----EEEEESSHHHHHHHHHHHHHHHHHHHCTTCCEEEEEBTCCCCSSHHHHHHSBCHHHHGG
T ss_pred HHHHHHHHHHHHhcCCC----eEEEeCCHHHHHHHHHHHHHHHhhcCCCCCceEEEEcCCcCCCchhhhhccCChhhccc
Confidence 56667778888888843 38999999999999998876421 3 3455555544 56666677788876
Q ss_pred -------EEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCcccc----ccCHHHHHHHHHHhCCCCCceEEEEec
Q 011842 208 -------CVKVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGA----VDDLDLVIQTLEESGFTQDRFYIHCDG 276 (476)
Q Consensus 208 -------v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~----id~l~~I~~ia~~~g~~~~~~~lhvD~ 276 (476)
++.+|.+ |+++|+++++++ +.+|+++++++++|. .+++++|+++|++||+ ++++|+
T Consensus 158 ~~p~~~~~~~~~~~-----d~~~l~~~l~~~---~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~-----~li~De 224 (397)
T 2ord_A 158 FEPLVPGFEYFEFN-----NVEDLRRKMSED---VCAVFLEPIQGESGIVPATKEFLEEARKLCDEYDA-----LLVFDE 224 (397)
T ss_dssp GCSCCTTEEEECTT-----CHHHHHHHCCTT---EEEEEECSEECTTTCEECCHHHHHHHHHHHHHHTC-----EEEEEC
T ss_pred cCCCCCCeeEecCC-----CHHHHHHHhhcC---eEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCC-----EEEEEe
Confidence 7777764 899999998643 458888889999998 3789999999999999 999999
Q ss_pred CcccccccccccCCCCC-CcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHH
Q 011842 277 ALFGLMMPFVKKAPKVS-FKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLW 355 (476)
Q Consensus 277 a~~g~~~~~~~~~~~~~-~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~ 355 (476)
+|+++... ..... +. .....|++++ +|++++|+++|+++++++++ .+... . ...++ +.+........
T Consensus 225 ~~~~~~~~-g~~~~-~~~~~~~~d~~s~--sK~~~~G~r~G~~~~~~~~~-~l~~~-~----~~~~~--~~~~~~~~a~~ 292 (397)
T 2ord_A 225 VQCGMGRT-GKLFA-YQKYGVVPDVLTT--AKGLGGGVPIGAVIVNERAN-VLEPG-D----HGTTF--GGNPLACRAGV 292 (397)
T ss_dssp TTTTTTTT-SSSSH-HHHHTCCCSEEEE--CGGGGTTSCCEEEEECSTTC-CCCTT-S----SCCSS--TTCHHHHHHHH
T ss_pred cccCCccC-ccchh-hhhhCCCCCeeee--ccccCCCcCeEEEEEchHhc-ccCCC-C----cCCCC--CCCHHHHHHHH
Confidence 99754321 11110 00 0112576644 69999889999999998764 33211 0 01111 11212222233
Q ss_pred HHHHHhChhcHHHHHHHHHHHHHHHHHHHHhc--CCeE--eecCCeeEEEEecCC---cHHHh-----hceeec-ccCCE
Q 011842 356 YTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDA--GISA--MLNELSSTVVFERPQ---DEEFV-----RRWQLA-CQGNI 422 (476)
Q Consensus 356 ~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~--g~~~--~~~~~~~iv~f~~~~---~~~~~-----~~~~l~-~~~~~ 422 (476)
++++.+.. ++..++..++++++.+.|++. ++.. ..++..+++.+..+. ..++. +++.+. ...+.
T Consensus 293 ~~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~ 369 (397)
T 2ord_A 293 TVIKELTK---EGFLEEVEEKGNYLMKKLQEMKEEYDVVADVRGMGLMIGIQFREEVSNREVATKCFENKLLVVPAGNNT 369 (397)
T ss_dssp HHHHHHTS---TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEECTTSCHHHHHHHHHHTTEECEEETTTE
T ss_pred HHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHHhCCceEEEEEEeEEEEEEECChHHHHHHHHHHHHCCCEEccCCCCE
Confidence 44444332 456777888889999998875 2321 122334556666543 23332 233332 23578
Q ss_pred EEEEEcCCCCHHHHHHHHHHHHHHHH
Q 011842 423 AHVVVMPNVTIDKLDDFLNELIENRS 448 (476)
Q Consensus 423 lRv~~~~~~T~edid~~~~~l~~~~~ 448 (476)
+|++++..+|++++++++++|+++.+
T Consensus 370 iRis~~~~~~~e~i~~~~~~l~~~l~ 395 (397)
T 2ord_A 370 IRFLPPLTVEYGEIDLAVETLKKVLQ 395 (397)
T ss_dssp EEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred EEEECCcCCCHHHHHHHHHHHHHHHh
Confidence 99998888999999999999988764
No 171
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.86 E-value=3.5e-20 Score=189.59 Aligned_cols=287 Identities=13% Similarity=0.082 Sum_probs=187.7
Q ss_pred HHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHH---HHHHHcC--CeEEEEe
Q 011842 138 RQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVF---KAARMYR--MECVKVD 212 (476)
Q Consensus 138 ~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~---~~~~~~G--~~v~~v~ 212 (476)
..+++.+++++++++|.+.. -+++++|++|+..++.++.. |++.|+++.++|.++. ......| ...+.++
T Consensus 75 ~~~~~~~~~~la~~~~~~~~---~v~~~sGs~a~~~a~~~~~~--~gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 149 (420)
T 3gbx_A 75 DVVEQLAIDRAKELFGADYA---NVQPHSGSQANFAVYTALLQ--PGDTVLGMNLAQGGHLTHGSPVNFSGKLYNIVPYG 149 (420)
T ss_dssp HHHHHHHHHHHHHHHTCSEE---ECCCSSHHHHHHHHHHHHCC--TTCEEEEEEEC------------CHHHHSEEEEEE
T ss_pred HHHHHHHHHHHHHHhCCCCc---eeEecCcHHHHHHHHHHhcC--CCCEEEecchhhcceeccchhhhhcccceeEEecc
Confidence 46677778999999999642 34456669999999888765 9999999999998843 2222333 3555667
Q ss_pred CCCCCccCHHHHHHHHHcC-CCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCC
Q 011842 213 CLISGEIDCADFKAKLLQN-KDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPK 291 (476)
Q Consensus 213 ~~~~g~~D~~~Le~~l~~~-~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~ 291 (476)
.+.++.+|+++|++++.++ ++ +|+++++++ |...|+++|.++|++||+ ++++|++|+.+........
T Consensus 150 ~~~~~~~d~~~l~~~i~~~~~~---~v~~~~~~~--~~~~~l~~l~~l~~~~~~-----~li~De~~~~~~~~~~~~~-- 217 (420)
T 3gbx_A 150 IDESGKIDYDEMAKLAKEHKPK---MIIGGFSAY--SGVVDWAKMREIADSIGA-----YLFVDMAHVAGLIAAGVYP-- 217 (420)
T ss_dssp ECTTCSCCHHHHHHHHHHHCCS---EEEECCTTC--CSCCCHHHHHHHHHHTTC-----EEEEECTTTHHHHHTTSSC--
T ss_pred CCccCCcCHHHHHHHHHhcCCe---EEEEecCcc--CCccCHHHHHHHHHHcCC-----EEEEECCcchhceecccCC--
Confidence 7777889999999999874 43 777766554 468899999999999999 9999999875443222111
Q ss_pred CCCcccccEEEEcCCCCCCCCCCceeEEeeh---hhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHH
Q 011842 292 VSFKKPIGSVSVSGHKFVGCPMPCGVQITRM---EHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQK 368 (476)
Q Consensus 292 ~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~---~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~ 368 (476)
.. ...+|+++.++||++++|. .|+++.++ ++.+.+.. +... ...++.......++++++.....+++++
T Consensus 218 ~~-~~~~di~~~s~sK~~~g~~-gg~~~~~~~~~~~~~~~~~---~~~~---~~~~~~~~~~~~a~~~a~~~~~~~~~~~ 289 (420)
T 3gbx_A 218 NP-VPHAHVVTTTTHKTLAGPR-GGLILAKGGDEELYKKLNS---AVFP---SAQGGPLMHVIAGKAVALKEAMEPEFKV 289 (420)
T ss_dssp CS-TTTSSEEEEESSGGGCSCS-CEEEEESSCCHHHHHHHHH---HHC-------CCCCHHHHHHHHHHHHHTTSHHHHH
T ss_pred cc-cccCCEEEeecccCCCCCC-ceEEEEcCCcHHHHHHhhh---hcCC---CCCCCcchhHHHHHHHHHHHHHhHhHHH
Confidence 11 1238999999999997555 48888887 55443321 1110 0112222222334444555544567788
Q ss_pred HHHHHHHHHHHHHHHHHhcCCeEeec-CCeeEEEEecCC---c-HHH---h--hceeecc-----------cCCEEEEEE
Q 011842 369 EVQKCLRNAHYLKDRLLDAGISAMLN-ELSSTVVFERPQ---D-EEF---V--RRWQLAC-----------QGNIAHVVV 427 (476)
Q Consensus 369 ~~~~~~~~a~~l~~~L~~~g~~~~~~-~~~~iv~f~~~~---~-~~~---~--~~~~l~~-----------~~~~lRv~~ 427 (476)
+.++..++++++.+.|++.|+..+.+ ..++++.+..+. + ..+ . +++.+.. ....+|+++
T Consensus 290 ~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~iRi~~ 369 (420)
T 3gbx_A 290 YQQQVAKNAKAMVEVFLNRGYKVVSGGTENHLFLLDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRIGS 369 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEEECCTTCSSCTTTCSEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHhcCCeeccCCCCCeEEEEEcCCCCCCHHHHHHHHHHCCcEeccccCCCCccccCCCcceEEec
Confidence 99999999999999999988765443 345566665432 1 222 1 2333322 124599987
Q ss_pred cCC----CCHHHHHHHHHHHHHHHHH
Q 011842 428 MPN----VTIDKLDDFLNELIENRST 449 (476)
Q Consensus 428 ~~~----~T~edid~~~~~l~~~~~~ 449 (476)
... .++++|+++++.|+++.+.
T Consensus 370 ~~~~~~~~~~~~i~~~~~~l~~~l~~ 395 (420)
T 3gbx_A 370 PAVTRRGFKEAEVKELAGWMCDVLDN 395 (420)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHHHHHT
T ss_pred chhcccCCCHHHHHHHHHHHHHHHhC
Confidence 543 5799999999999887653
No 172
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=99.86 E-value=4.9e-21 Score=194.66 Aligned_cols=291 Identities=12% Similarity=0.016 Sum_probs=191.5
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcccEEE--cCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeC
Q 011842 136 HSRQFEVGVLDWFARLWELENNEYWGYI--TNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDC 213 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~~g~~--t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~ 213 (476)
+..++++++.+++... +.++ ..+++ |+||++|+..++.+++...|++.|+++.++|.++...++..|++++.+|.
T Consensus 70 g~~~lr~~la~~~~~~-~~~~--~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~ 146 (394)
T 2ay1_A 70 GEPEFQKAMGELILGD-GLKS--ETTATLATVGGTGALRQALELARMANPDLRVFVSDPTWPNHVSIMNFMGLPVQTYRY 146 (394)
T ss_dssp CCHHHHHHHHHHHHGG-GCCG--GGEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHHTCCEEEEEC
T ss_pred CcHHHHHHHHHHHhCC-CCCc--ccEEEEecCCchhHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCceEEEec
Confidence 3468888887776422 2232 35888 99999999999887765448899999999999999999999999999998
Q ss_pred C--CCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCccccccccc-c
Q 011842 214 L--ISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFV-K 287 (476)
Q Consensus 214 ~--~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~-~ 287 (476)
+ .++.+|+++|++++.+.+.+..+++++++.|+||.+.+ +++|+++|++||+ ++++|++|+++..... .
T Consensus 147 ~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~-----~li~De~~~~~~~~~~~~ 221 (394)
T 2ay1_A 147 FDAETRGVDFEGMKADLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGA-----LPLIDLAYQGFGDGLEED 221 (394)
T ss_dssp EETTTTEECHHHHHHHHHTCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTC-----EEEEEECCTTSSSCHHHH
T ss_pred ccccCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCC-----EEEEecCccccccCcccc
Confidence 5 56789999999999865333456777899999999865 6688999999999 9999999987554210 0
Q ss_pred cCCCCCCcc-cc-cEEEEcCCCCCC-CCCCceeEEe---ehhhhhhhcCCcc-ccCCCCCcccCCCCChhHHHHHHHHHH
Q 011842 288 KAPKVSFKK-PI-GSVSVSGHKFVG-CPMPCGVQIT---RMEHINVLSSNVE-YLASRDATIMGSRNGHAPIFLWYTLNR 360 (476)
Q Consensus 288 ~~~~~~~~~-~~-Dsi~~s~hK~l~-~p~~~G~l~~---~~~~~~~l~~~~~-yl~~~~~~~~~sr~~~~~l~~~~~l~~ 360 (476)
..+...+.. .. +++..+++|+++ .++++|++++ ++++++.+..... ... .+..+ .+ .+.++++.+.
T Consensus 222 ~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~l~~~~~~~~~---~~~~~-~~---~~~~~a~~~~ 294 (394)
T 2ay1_A 222 AAGTRLIASRIPEVLIAASCSKNFGIYRERTGCLLALCADAATRELAQGAMAFLNR---QTYSF-PP---FHGAKIVSTV 294 (394)
T ss_dssp HHHHHHHHHHCSSEEEEEECTTTTTCGGGCEEEEEEECSSHHHHHHHHHHHHHHHH---TTTSS-CC---CHHHHHHHHH
T ss_pred hHHHHHHhhcCCCEEEEEeccCCCcCcCCccceEEEEeCCHHHHHHHHHHHHHHHh---hhcCC-CC---hHHHHHHHHH
Confidence 000000111 12 356778999997 6788999998 4543322211000 000 01111 12 2233333333
Q ss_pred hC--------hhcHHHHHHHHHHHHHHHHHHHHhcC----CeEeecCCeeEEEEecCCcHHH---h--hceeecccCCEE
Q 011842 361 KG--------YKGFQKEVQKCLRNAHYLKDRLLDAG----ISAMLNELSSTVVFERPQDEEF---V--RRWQLACQGNIA 423 (476)
Q Consensus 361 ~g--------~~g~~~~~~~~~~~a~~l~~~L~~~g----~~~~~~~~~~iv~f~~~~~~~~---~--~~~~l~~~~~~l 423 (476)
+. .+.+++..++..++++++.+.|++.+ +....+...+++.+..+ ...+ . +++.+.. .+
T Consensus 295 l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~l~~~gi~v~~---~~ 370 (394)
T 2ay1_A 295 LTTPELRADWMAELEAVRSGMLRLREQLAGELRDLSGSDRFGFVAEHRGMFSRLGAT-PEQVKRIKEEFGIYMVG---DS 370 (394)
T ss_dssp HHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSTTTHHHHCCSSEEECCCC-HHHHHHHHHHHCEECCT---TC
T ss_pred hcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCeeEEcCCceEEEeeCCC-HHHHHHHHHhCCEEecC---CC
Confidence 21 23567778888889999999998875 33333333444443333 2222 1 1222222 26
Q ss_pred EEEEcCCCCHHHHHHHHHHHHHH
Q 011842 424 HVVVMPNVTIDKLDDFLNELIEN 446 (476)
Q Consensus 424 Rv~~~~~~T~edid~~~~~l~~~ 446 (476)
|+++. .+|+++|++++++|+++
T Consensus 371 Ris~~-~~~~~~i~~~~~~l~~~ 392 (394)
T 2ay1_A 371 RINIA-GLNDNTIPILARAIIEV 392 (394)
T ss_dssp EEEGG-GCCTTTHHHHHHHHHHH
T ss_pred eEEee-cCCHhhHHHHHHHHHHc
Confidence 99877 57999999999999875
No 173
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.86 E-value=1.7e-19 Score=185.41 Aligned_cols=214 Identities=14% Similarity=0.118 Sum_probs=164.5
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHH----cCCeEEEEeCC
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARM----YRMECVKVDCL 214 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~----~G~~v~~v~~~ 214 (476)
...+++.+++++++|.+. .++++||++|+..++.++.. ||+.|+++.+.|.+....++. +|++++.+|.+
T Consensus 81 p~~~~l~~~la~~~g~~~----~~~~~sG~~Ai~~al~~l~~--~Gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~ 154 (414)
T 3ndn_A 81 PTVSVFEERLRLIEGAPA----AFATASGMAAVFTSLGALLG--AGDRLVAARSLFGSCFVVCSEILPRWGVQTVFVDGD 154 (414)
T ss_dssp HHHHHHHHHHHHHHTCSE----EEEESSHHHHHHHHHHTTCC--TTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT
T ss_pred hHHHHHHHHHHHHHCCCc----EEEECCHHHHHHHHHHHHhC--CCCEEEEcCCccchHHHHHHHHHHHcCcEEEEeCCC
Confidence 566778888999998742 78999999999988887754 899999999999987766644 89999999986
Q ss_pred CCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCC
Q 011842 215 ISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSF 294 (476)
Q Consensus 215 ~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~ 294 (476)
|+++|++++.++++ +|++++++|++|.+.|+++|+++|++||+ ++++|++|+.+.... ..
T Consensus 155 -----d~~~l~~ai~~~t~---~v~le~p~NptG~~~~l~~i~~la~~~g~-----~livDe~~~~~~~~~-------~~ 214 (414)
T 3ndn_A 155 -----DLSQWERALSVPTQ---AVFFETPSNPMQSLVDIAAVTELAHAAGA-----KVVLDNVFATPLLQQ-------GF 214 (414)
T ss_dssp -----CHHHHHHHTSSCCS---EEEEESSCTTTCCCCCHHHHHHHHHHTTC-----EEEEECTTTHHHHCC-------CG
T ss_pred -----CHHHHHHhcCCCCe---EEEEECCCCCCCccccHHHHHHHHHHcCC-----EEEEECCCcccccCC-------ch
Confidence 89999999987665 88889999999999999999999999999 999999998443210 11
Q ss_pred cccccEEEEcCCCCCCCC--CCceeEEeehhhhh-hhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHH
Q 011842 295 KKPIGSVSVSGHKFVGCP--MPCGVQITRMEHIN-VLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQ 371 (476)
Q Consensus 295 ~~~~Dsi~~s~hK~l~~p--~~~G~l~~~~~~~~-~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~ 371 (476)
..++|+++.|++|+++.+ ..+|+++.+++.+. .+......+ ++. ..++..|.+++. .+.+..+++
T Consensus 215 ~~g~div~~S~sK~l~~~G~~~~G~vv~~~~~~~~~l~~~~~~~--------g~~--~~~~~a~~~~~~--l~~l~~r~~ 282 (414)
T 3ndn_A 215 PLGVDVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRHT--------GPA--MSAFNAWVLLKG--LETLAIRVQ 282 (414)
T ss_dssp GGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHTTHHHHHHHHH--------CCC--CCHHHHHHHHHH--GGGHHHHHH
T ss_pred hcCCCeEeccCCccccCCCCceEEEEEECHHHHHHHHHHHHHHc--------CCC--CCHHHHHHHHHH--HHHHHHHHH
Confidence 223799999999999853 34899999887543 332111111 111 124555655553 466788888
Q ss_pred HHHHHHHHHHHHHHhcCCe
Q 011842 372 KCLRNAHYLKDRLLDAGIS 390 (476)
Q Consensus 372 ~~~~~a~~l~~~L~~~g~~ 390 (476)
+..++++++.+.|++.+..
T Consensus 283 ~~~~~a~~l~~~L~~~p~v 301 (414)
T 3ndn_A 283 HSNASAQRIAEFLNGHPSV 301 (414)
T ss_dssp HHHHHHHHHHHHHHTCTTE
T ss_pred HHHHHHHHHHHHHhcCCCE
Confidence 9999999999999987643
No 174
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.86 E-value=8.4e-20 Score=185.83 Aligned_cols=279 Identities=14% Similarity=0.079 Sum_probs=180.1
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhh-----CCCcEEEecCCCchHHH-HHHHHc--------
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREV-----FPDGILYASRESHYSVF-KAARMY-------- 204 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~-----~p~~~Vl~s~~~H~S~~-~~~~~~-------- 204 (476)
+..+++.+++++++|.+ .+++|+|||+|+..++.+++.. .+++.|++.++.|+... .+....
T Consensus 78 ~~~~~l~~~la~~~~~~----~v~~~~gg~ea~~~al~~~~~~~~~~g~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~ 153 (395)
T 3nx3_A 78 ENIAAAAKNLAKASALE----RVFFTNSGTESIEGAMKTARKYAFNKGVKGGQFIAFKHSFHGRTLGALSLTANEKYQKP 153 (395)
T ss_dssp HHHHHHHHHHHHHHTCS----EEEEESSHHHHHHHHHHHHHHHHHHTTCTTCEEEEETTCCCCSSHHHHTTCCCHHHHGG
T ss_pred HHHHHHHHHHHHhcCCC----eEEEeCCHHHHHHHHHHHHHHHhhccCCCCCEEEEEcCCcCCCCHHHHhhcCCcccccc
Confidence 66778888899988842 4999999999999999988754 35677887777764432 222221
Q ss_pred ----CCeEEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC----HHHHHHHHHHhCCCCCceEEEEec
Q 011842 205 ----RMECVKVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD----LDLVIQTLEESGFTQDRFYIHCDG 276 (476)
Q Consensus 205 ----G~~v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~----l~~I~~ia~~~g~~~~~~~lhvD~ 276 (476)
+.++..+|.+ |+++|+++++++ +.+|+++...+++|.+.+ +++|.++|++||+ ++|+|+
T Consensus 154 ~~~~~~~~~~~~~~-----d~~~l~~~l~~~---~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~-----~li~De 220 (395)
T 3nx3_A 154 FKPLISGVKFAKYN-----DISSVEKLVNEK---TCAIILESVQGEGGINPANKDFYKALRKLCDEKDI-----LLIADE 220 (395)
T ss_dssp GCSCCSCEEEECTT-----CHHHHHTTCCTT---EEEEEEESEECTTSCEECCHHHHHHHHHHHHHHTC-----EEEEEC
T ss_pred cCCCCCCcEEeCCC-----CHHHHHHhccCC---eEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCC-----EEEEEe
Confidence 2356666654 899999988643 347777777788899877 9999999999999 999999
Q ss_pred CcccccccccccCCCCCCcc-cccEEEEcCCCCCCCCCCceeEEeehhh-hhhhcCCccccCCCCCcccCCCCChhHHHH
Q 011842 277 ALFGLMMPFVKKAPKVSFKK-PIGSVSVSGHKFVGCPMPCGVQITRMEH-INVLSSNVEYLASRDATIMGSRNGHAPIFL 354 (476)
Q Consensus 277 a~~g~~~~~~~~~~~~~~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~-~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~ 354 (476)
+|.++........ .+... ..|+++++ |.++.++++|++++++++ .+.+.... + ..++.+ .++.+
T Consensus 221 v~~~~g~~g~~~~--~~~~~~~~d~~t~s--K~~~~G~~~G~~~~~~~~~~~~~~~~~-~----~~~~~~-----~~~~~ 286 (395)
T 3nx3_A 221 IQCGMGRSGKFFA--YEHAQILPDIMTSA--KALGCGLSVGAFVINQKVASNSLEAGD-H----GSTYGG-----NPLVC 286 (395)
T ss_dssp TTTTTTTTSSSSG--GGGGTCCCSEEEEC--GGGTTTSCCEEEEECHHHHHHHSCTTC-C----SSCBSC-----CHHHH
T ss_pred cccCCCcCCcchh--HHhcCCCCCEEEec--ccccCCCceEEEEEchhhhhhhcCCcc-c----CCCCCC-----CHHHH
Confidence 9976422111000 11111 25777654 877778999999999987 66653211 0 011111 23444
Q ss_pred HHHHHHhChhcHHHHHHHHHHHHHHHHHHHHh----cCCeEeecCCeeEEEEecCC---cHHHh-----hceee-cccCC
Q 011842 355 WYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLD----AGISAMLNELSSTVVFERPQ---DEEFV-----RRWQL-ACQGN 421 (476)
Q Consensus 355 ~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~g~~~~~~~~~~iv~f~~~~---~~~~~-----~~~~l-~~~~~ 421 (476)
++++..+..-.-++..++..++.+++++.|++ .+.....++..+++.+..+. ...+. ++..+ +...+
T Consensus 287 ~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~~ 366 (395)
T 3nx3_A 287 AGVNAVFEIFKEEKILENVNKLTPYLEQSLDELINEFDFCKKRKGLGFMQGLSLDKSVKVAKVIQKCQENALLLISCGEN 366 (395)
T ss_dssp HHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEECTTSCHHHHHHHHHHTTEECEEETTT
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeEEEEEEEEeCCcchHHHHHHHHHHCCCEEecCCCC
Confidence 44443332111134556666666667666655 34333333334555565543 22222 23333 33468
Q ss_pred EEEEEEcCCCCHHHHHHHHHHHHHHHH
Q 011842 422 IAHVVVMPNVTIDKLDDFLNELIENRS 448 (476)
Q Consensus 422 ~lRv~~~~~~T~edid~~~~~l~~~~~ 448 (476)
.+|++++..+|+++|++++++|+++.+
T Consensus 367 ~iRi~~~~~~t~e~i~~~l~~l~~~l~ 393 (395)
T 3nx3_A 367 DLRFLPPLILQKEHIDEMSEKLRKALK 393 (395)
T ss_dssp EEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 999999999999999999999998765
No 175
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.86 E-value=1.2e-19 Score=186.86 Aligned_cols=292 Identities=12% Similarity=0.030 Sum_probs=183.1
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhh-----CCCcEEEecCCCch-HHHHHHHHcC-------
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREV-----FPDGILYASRESHY-SVFKAARMYR------- 205 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~-----~p~~~Vl~s~~~H~-S~~~~~~~~G------- 205 (476)
....++.+.++++++.+.+ ++++|+|||+|+..++.+++.. .|++.|++.+++|. +...++...|
T Consensus 86 ~~~~~l~~~la~~~~~~~~--~v~~~~ggtea~~~ai~~~~~~~~~~g~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~ 163 (429)
T 1s0a_A 86 APAIELCRKLVAMTPQPLE--CVFLADSGSVAVEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHS 163 (429)
T ss_dssp HHHHHHHHHHHHHSCTTCC--EEEEESSHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTTGG
T ss_pred HHHHHHHHHHHHhCCCCCC--EEEEeCCHHHHHHHHHHHHHHHhcccCCCCCeEEEECCCCCCCchhhhhhcCCchhhcc
Confidence 3445666778888887543 5999999999999999876531 15778888776544 3333333322
Q ss_pred ------CeEEEEeCCC------CCccCHHHHHHHHHcCCCCcEEEEEeeC-CCccccccC----HHHHHHHHHHhCCCCC
Q 011842 206 ------MECVKVDCLI------SGEIDCADFKAKLLQNKDKPAIINVNIG-TTVKGAVDD----LDLVIQTLEESGFTQD 268 (476)
Q Consensus 206 ------~~v~~v~~~~------~g~~D~~~Le~~l~~~~~~p~~vv~t~g-tt~tG~id~----l~~I~~ia~~~g~~~~ 268 (476)
.+++.++.+. .+.+|+++|+++|++...++.+|+++.. .+++|.+.| +++|.++|++||+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~--- 240 (429)
T 1s0a_A 164 LWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGI--- 240 (429)
T ss_dssp GGTTTSCCCEEECCCCSBC-CCCCGGGGHHHHHHHHHHTTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTC---
T ss_pred cccCCCCCceEeCCCcccccccchHHHHHHHHHHHHhCCCCEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHcCC---
Confidence 1355565531 2468999999999753223346666555 688998777 9999999999999
Q ss_pred ceEEEEecCcccccccccccCCCCCCcc-cccEEEEcCCCCCCCC-CCceeEEeehhhhhhhcCCc--cccCCCCCcccC
Q 011842 269 RFYIHCDGALFGLMMPFVKKAPKVSFKK-PIGSVSVSGHKFVGCP-MPCGVQITRMEHINVLSSNV--EYLASRDATIMG 344 (476)
Q Consensus 269 ~~~lhvD~a~~g~~~~~~~~~~~~~~~~-~~Dsi~~s~hK~l~~p-~~~G~l~~~~~~~~~l~~~~--~yl~~~~~~~~~ 344 (476)
++|+|++|+++.... ... .++... ..|+++++ |+++.| +++|++++++++++.+.... .+.. ..++
T Consensus 241 --~li~De~~~~~g~~g-~~~-~~~~~~~~~d~~t~s--K~l~~G~~~iG~~~~~~~~~~~l~~~~~~~~~~--~~t~-- 310 (429)
T 1s0a_A 241 --LLIADEIATGFGRTG-KLF-ACEHAEIAPDILCLG--KALTGGTMTLSATLTTREVAETISNGEAGCFMH--GPTF-- 310 (429)
T ss_dssp --EEEEECTTTTTTTTS-SSS-GGGGGTCCCSEEEEC--GGGGTSSSCCEEEEECHHHHHHHHTSTTSSCSC--CCTT--
T ss_pred --EEEEeehhhCCcccc-hHH-HhhhcCCCCCEEEec--ccccCCCccceEEEeCHHHHHHhhcCCCccccc--CCCC--
Confidence 999999997542211 100 011111 26777654 888878 89999999988766654311 1100 0111
Q ss_pred CCCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcC---CeEeecCCeeEEEEecCC---cHHHh-----hc
Q 011842 345 SRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAG---ISAMLNELSSTVVFERPQ---DEEFV-----RR 413 (476)
Q Consensus 345 sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g---~~~~~~~~~~iv~f~~~~---~~~~~-----~~ 413 (476)
+.+.....+..++++.+.. ++..++..+++++|.++|++.+ .....++..+++.+..+. ...+. ++
T Consensus 311 ~~n~~~~~a~~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~l~~~G 387 (429)
T 1s0a_A 311 MGNPLACAAANASLAILES---GDWQQQVADIEVQLREQLAPARDAEMVADVRVLGAIGVVETTHPVNMAALQKFFVEQG 387 (429)
T ss_dssp TTCHHHHHHHHHHHHHHHT---CHHHHHHHHHHHHHHHHHGGGGGCTTEEEEEEETTEEEEEESSCBCHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEeeEEEEEEECCcccHHHHHHHHHHCC
Confidence 1111222223334443322 2456777888999999998752 222222233455555542 22232 23
Q ss_pred eeecccCCEEEEEEcCCCCHHHHHHHHHHHHHHHH
Q 011842 414 WQLACQGNIAHVVVMPNVTIDKLDDFLNELIENRS 448 (476)
Q Consensus 414 ~~l~~~~~~lRv~~~~~~T~edid~~~~~l~~~~~ 448 (476)
+.+...++.+|++++..+|++||++++++|+++.+
T Consensus 388 i~v~~~~~~iRis~~~~~t~e~i~~~~~~l~~~~~ 422 (429)
T 1s0a_A 388 VWIRPFGKLIYLMPPYIILPQQLQRLTAAVNRAVQ 422 (429)
T ss_dssp EECCCBTTEEEECCCTTCCHHHHHHHHHHHHHHTS
T ss_pred CEEeccCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 34433457899999889999999999999988753
No 176
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=99.86 E-value=2.8e-20 Score=197.35 Aligned_cols=303 Identities=13% Similarity=0.040 Sum_probs=201.9
Q ss_pred hhHHHHHHHHHHHHHH-cC-CCCC-cccEEEcCCchhHHHHHHHHHHh---hCCCcEEEecCCCchHHHHHHHHcCCeEE
Q 011842 136 HSRQFEVGVLDWFARL-WE-LENN-EYWGYITNCGTEGNLHGILVGRE---VFPDGILYASRESHYSVFKAARMYRMECV 209 (476)
Q Consensus 136 ~~~~le~~~~~~la~l-~g-~~~~-~~~g~~t~ggt~An~~al~aa~~---~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~ 209 (476)
+..++++++.+++.+. .+ .+.. +..+++|+|+|+|+..++.+... ..|++.|+++.++|.++..+++..|++++
T Consensus 139 g~~~lr~~ia~~l~~~~~~~~~~~~~~~i~~t~G~t~al~~~~~~l~~~~l~~~gd~Viv~~p~~~~~~~~~~~~g~~~~ 218 (533)
T 3f6t_A 139 CLVNTEKIINYFLQELSYKDANLAEQTDLFPTEGGTAAIVYAFHSLAENHLLKKGDKIAINEPIFTPYLRIPELKDYELV 218 (533)
T ss_dssp CCHHHHHHHHHHHHHHHTTTCCCGGGEEEEEEEHHHHHHHHHHHHHHHTTSSCTTCEEEEESSCCHHHHTSGGGGGSEEE
T ss_pred cHHHHHHHHHHHHHHhcCCCCCCCCcceEEEECCHHHHHHHHHHHhhhhhccCCcCEEEEcCCCcHHHHHHHHHcCCeEE
Confidence 5679999999999777 23 3332 24699999999999988876311 23889999999999999999999999999
Q ss_pred EEeCC----CCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHH---HHHHHHH-HhCCCCCceEEEEecCcccc
Q 011842 210 KVDCL----ISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLD---LVIQTLE-ESGFTQDRFYIHCDGALFGL 281 (476)
Q Consensus 210 ~v~~~----~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~---~I~~ia~-~~g~~~~~~~lhvD~a~~g~ 281 (476)
.++++ .++.+|+++|++++.+++ .+|++++++|++|.+.+.+ +|+++|+ +||+ ++++|++|+.+
T Consensus 219 ~v~~~~~~~~~~~~d~~~l~~~l~~~~---k~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~-----~li~De~y~~~ 290 (533)
T 3f6t_A 219 EVDLHSYEKNDWEIEPNEIEKLKDPSI---KALIVVNPTNPTSKEFDTNALNAIKQAVEKNPKL-----MIISDEVYGAF 290 (533)
T ss_dssp EECCCEETTTTSEECHHHHHHHSCTTE---EEEEEESSCTTTCBCCCHHHHHHHHHHHHHCTTC-----EEEEECTTGGG
T ss_pred EEEecCCcccCCCCCHHHHHHHhCCCC---eEEEEeCCCCCCccccCHHHHHHHHHHHHhCCCC-----EEEEcCCcccc
Confidence 99985 357899999999986544 4777889999999997655 8888888 6899 99999999865
Q ss_pred cccccccCCCCCCcccccEEEEcCCCCCC-CCCCceeEEeehh-----hhhhhcC---------------Cc---ccc--
Q 011842 282 MMPFVKKAPKVSFKKPIGSVSVSGHKFVG-CPMPCGVQITRME-----HINVLSS---------------NV---EYL-- 335 (476)
Q Consensus 282 ~~~~~~~~~~~~~~~~~Dsi~~s~hK~l~-~p~~~G~l~~~~~-----~~~~l~~---------------~~---~yl-- 335 (476)
..... +........++++.|++|.++ .++++|+++++++ +++.+.. .+ .++
T Consensus 291 ~~~~~---~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~~~~~~~~li~~l~~~~~~~~~~~~~~~~~~p~~~~~i~r 367 (533)
T 3f6t_A 291 VPNFK---SIYSVVPYNTMLVYSYSKLFGCTGWRLGVIALNEKNVFDDNIAHLDKVELRQLHKRYSSVVLDPDKMKFIDR 367 (533)
T ss_dssp STTCC---CHHHHSGGGEEEEEESHHHHTCGGGCEEEEEEESSCHHHHHHHTSCHHHHHHHHHHHHTTCSCGGGCCHHHH
T ss_pred ccCcc---CHhhcCCCCEEEEecCcccCCCcccceEEEEECcHHHHHHHHHhcchhhHHHHHhhhhccccCcchhhhHHH
Confidence 54211 101111225688899999886 6788999999876 3332210 00 000
Q ss_pred -----CCCCCcccCCCCChhHHHHHH----HHHHh--------ChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCe-
Q 011842 336 -----ASRDATIMGSRNGHAPIFLWY----TLNRK--------GYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNELS- 397 (476)
Q Consensus 336 -----~~~~~~~~~sr~~~~~l~~~~----~l~~~--------g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~- 397 (476)
.........+. ....+.+ ++..+ ....+++..+++.+++++|.+.|. .++.. ..+..
T Consensus 368 l~~~~~~~~~~~~~~~---~~~~q~a~a~~a~~~L~~~~g~~~~~~~~~~~~~~~~~r~~~l~~~L~-~~~~~-~~~~~g 442 (533)
T 3f6t_A 368 LCADSRSIGLYHTAGL---STPQQIMEALFSMTHLLTSTNGGSDDPYIDIARKLVSERYDQLHDAMQ-APKDE-TDTNTH 442 (533)
T ss_dssp HHHHHTTTTTGGGCSC---CHHHHHHHHHHHHHHHTTCBGGGTBCHHHHHHHHHHHHHHHHHHHHHT-CCCCC-STTBCC
T ss_pred HHHHHHHHHHhcccCC---ChHHHHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHhcC-CCccc-cCCCce
Confidence 00000011111 1222222 33333 224467777888889999999997 66532 33333
Q ss_pred eEEEEecC-------------------CcHHHh----h--ceeecc------cCCEEEEEEcCCCCHHHHHHHHHHHHHH
Q 011842 398 STVVFERP-------------------QDEEFV----R--RWQLAC------QGNIAHVVVMPNVTIDKLDDFLNELIEN 446 (476)
Q Consensus 398 ~iv~f~~~-------------------~~~~~~----~--~~~l~~------~~~~lRv~~~~~~T~edid~~~~~l~~~ 446 (476)
..+.+..+ .+.++. + +..+.. ..+.+|+++. ..++++|+.+++.|.++
T Consensus 443 ~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~ll~~~GV~v~pg~~f~~~~~~iRls~a-~~~~e~i~~~i~~L~~~ 521 (533)
T 3f6t_A 443 YYSLIDIYRLAEKIYGKEFRDYLTNNFEQVDFLLKLAEKNGVVLVDGVGFGAKPGELRVSQA-NLPTEDYALIGKQVLEL 521 (533)
T ss_dssp SEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHTTSSSCTTEEECSSTTEEEEESS-SSCHHHHHHHHHHHHHH
T ss_pred EEEEEehHhhhhhccchHHHHHhhccCCHHHHHHHHHHhCCEEEeCCcccCCCCCEEEEEEe-eCCHHHHHHHHHHHHHH
Confidence 33333322 111221 1 222211 1468999884 46899999999999999
Q ss_pred HHHHHhcCC
Q 011842 447 RSTWYEDGK 455 (476)
Q Consensus 447 ~~~~~~~~~ 455 (476)
.+++.+..+
T Consensus 522 l~~~~~~~~ 530 (533)
T 3f6t_A 522 LKEYYEEFK 530 (533)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHHH
Confidence 988876554
No 177
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.85 E-value=1.8e-20 Score=187.93 Aligned_cols=275 Identities=11% Similarity=0.054 Sum_probs=178.1
Q ss_pred HHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCc--EEEecCCCchHHHH---HHHHcCCeEEEEeCCCC
Q 011842 142 VGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDG--ILYASRESHYSVFK---AARMYRMECVKVDCLIS 216 (476)
Q Consensus 142 ~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~--~Vl~s~~~H~S~~~---~~~~~G~~v~~v~~~~~ 216 (476)
.++++++++++|.+. .++++|||+|+..++.++.. +++ +|+++...|++... .+...|++++.++. ++
T Consensus 50 ~~l~~~la~~~~~~~----~i~~~~G~~a~~~al~~~~~--~gd~~~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~-~~ 122 (357)
T 3lws_A 50 EPFEQKFADVLGMDD----AVFFPSGTMAQQVALRIWSD--ETDNRTVAYHPLCHLEIHEQDGLKELHPIETILVGA-AD 122 (357)
T ss_dssp HHHHHHHHHHHTCSE----EEEESCHHHHHHHHHHHHHH--HHTCCEEEECTTCHHHHSSTTHHHHHSSCEEEECSC-TT
T ss_pred HHHHHHHHHHhCCCc----EEEecCcHHHHHHHHHHHhh--cCCCcEEEecccceeeeeccchhhhccCcEEEEecC-CC
Confidence 345566788888753 57778999999999988776 555 89999999987654 45667999988885 46
Q ss_pred CccCHHHHHHHHHcCCCCcEEEEEeeCCCcc-ccccC---HHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCC
Q 011842 217 GEIDCADFKAKLLQNKDKPAIINVNIGTTVK-GAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKV 292 (476)
Q Consensus 217 g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~t-G~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~ 292 (476)
+.+|+++|+++. ++ .+|+++++++++ |.+.+ +++|+++|++||+ |+|+|++|......... ....
T Consensus 123 ~~~d~~~l~~~~--~~---~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~-----~li~D~a~~~~~~~~~~-~~~~ 191 (357)
T 3lws_A 123 RLMTLDEIKALP--DI---ACLLLELPQREIGGVAPAFSELETISRYCRERGI-----RLHLDGARLFEMLPYYE-KTAA 191 (357)
T ss_dssp SCCCHHHHHTCC--SC---SEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTC-----EEEEEETTHHHHHHHHT-CCHH
T ss_pred CCcCHHHHhcCc--Cc---ceEEEEcccccCCceeCCHHHHHHHHHHHHHcCC-----EEEEECchhhhhhhhcC-CChH
Confidence 789999999872 23 378888898887 88764 9999999999999 99999998622111100 0001
Q ss_pred CCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCC-hhHHHHHHHHHHhChhcHHHHHH
Q 011842 293 SFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNG-HAPIFLWYTLNRKGYKGFQKEVQ 371 (476)
Q Consensus 293 ~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~-~~~l~~~~~l~~~g~~g~~~~~~ 371 (476)
.+...+|+++.++||++++|.+ |+++.++++++.+.......... .+.. ..+.....+++. ..+.++
T Consensus 192 ~~~~~~d~~~~s~sK~~~~~~g-g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~l~~-----~~~~~~ 259 (357)
T 3lws_A 192 EIAGLFDSIYISFYKGLGGIAG-AILAGPAAFCQTARIWKRRYGGD------LISLYPYIVSADYYYEL-----RKDRMG 259 (357)
T ss_dssp HHHTTSSEEEEESSSTTCCSSC-EEEEECHHHHHHHHHHHHHTTCC------CSCCHHHHHHHHHHHHH-----HTTCHH
T ss_pred HHHhcCCEEEEeccccCCCCce-EEEEcCHHHHHHHHHHHHHhcCC------cccchHHHHHHHHHHHH-----HHHHHH
Confidence 1112368889999999977777 88888887765553211111100 0111 111111222322 223345
Q ss_pred HHHHHHHHHHHHHHhcCCeEe--ecCCeeEEEEecCCc-----HHHh-----hceeecc------cCCEEEEEEcCC---
Q 011842 372 KCLRNAHYLKDRLLDAGISAM--LNELSSTVVFERPQD-----EEFV-----RRWQLAC------QGNIAHVVVMPN--- 430 (476)
Q Consensus 372 ~~~~~a~~l~~~L~~~g~~~~--~~~~~~iv~f~~~~~-----~~~~-----~~~~l~~------~~~~lRv~~~~~--- 430 (476)
+..++++++.+.|++.+...+ .++.++++.+..+.. ..+. +++.+.. ....+|+++...
T Consensus 260 ~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~g~~~~~~~~~~r~~i~~~~~~ 339 (357)
T 3lws_A 260 QYYEQAKQLAEQFNALPGVHTTPEVPVSNMFHLHFDGQAADISPKLEQVQEETGLGFVGYLVDKDGYCSTEISVGDAYGE 339 (357)
T ss_dssp HHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEEEEESCHHHHHHHHHHHHHHHCEESCSCCEECSSEEEEEEEBCTTGGG
T ss_pred HHHHHHHHHHHHHHhCCCCeeccCCCcceEEEEEecCChHHHHHHHHHHHHhcCeEEecccccCCCceEEEEEecchhhh
Confidence 567788899999999843333 355677777766542 2222 2222221 123788887644
Q ss_pred CCHHHHHHHHHHHHHH
Q 011842 431 VTIDKLDDFLNELIEN 446 (476)
Q Consensus 431 ~T~edid~~~~~l~~~ 446 (476)
.+.++++..++.|.++
T Consensus 340 ~~~~~l~~al~~l~~a 355 (357)
T 3lws_A 340 LDQQTRDAGFARLRQA 355 (357)
T ss_dssp SCHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHh
Confidence 5788888888887664
No 178
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.85 E-value=2.3e-19 Score=194.18 Aligned_cols=294 Identities=12% Similarity=0.067 Sum_probs=195.1
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCC-C
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLIS-G 217 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~-g 217 (476)
....++.+.+|+++|.+. ..++++|+|.||..++.+... |||.|+++++.|.|+..++++.|++++.++.+.+ .
T Consensus 195 g~i~eaE~~lA~~fGa~~---a~~v~nGts~An~~ai~al~~--pGD~VLv~r~~H~S~~~~l~lsGa~pv~v~~~~~~~ 269 (715)
T 3n75_A 195 GPHKEAEQYIARVFNADR---SYMVTNGTSTANKIVGMYSAP--AGSTILIDRNCHKSLTHLMMMSDVTPIYFRPTRNAY 269 (715)
T ss_dssp THHHHHHHHHHHHHTCSE---EEEESSHHHHHHHHHHHHHCC--TTCEEEEESSCCHHHHHHHHHSCCEEEEECCCBCTT
T ss_pred HHHHHHHHHHHHHhCCCC---ceEECcHHHHHHHHHHHHhCC--CCCEEEECCCccHHHHHHHHHcCCEEEEEecccccc
Confidence 445567777899999974 255566668999998888876 9999999999999999999999999999987532 2
Q ss_pred ----cc-----CHHHHHHHHHcC--CCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccc--c
Q 011842 218 ----EI-----DCADFKAKLLQN--KDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMM--P 284 (476)
Q Consensus 218 ----~~-----D~~~Le~~l~~~--~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~--~ 284 (476)
.+ |+++|+++|.++ +++|.+++++++ |++|.+.|+++|+++|+++ ++++|+||++++. +
T Consensus 270 gi~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~p-n~~G~v~dl~~I~ela~~~-------~livDEAH~~~~~f~~ 341 (715)
T 3n75_A 270 GILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYNTDFIKKTLDVK-------SIHFDSAWVPYTNFSP 341 (715)
T ss_dssp CCBCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESS-CTTSEEECHHHHHHHCCCS-------EEEEECTTCTTGGGSG
T ss_pred ccccCcccccCCHHHHHHHHhhCcCccCceEEEEECC-CCCCccCCHHHHHHHhCcC-------cEEEccccccccccCC
Confidence 24 899999999865 345667888888 8999999999999999643 4799999986542 2
Q ss_pred ccccCCCCCCcccccEE---EEcCCCCCCCCCCceeEEeehhh-hhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHH
Q 011842 285 FVKKAPKVSFKKPIGSV---SVSGHKFVGCPMPCGVQITRMEH-INVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNR 360 (476)
Q Consensus 285 ~~~~~~~~~~~~~~Dsi---~~s~hK~l~~p~~~G~l~~~~~~-~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~ 360 (476)
.......+.....+|.+ +.|+||+++++.++|+++++++. ...+.....++.+ .|.+.....++-++++.
T Consensus 342 ~~~~~~al~~g~~aD~vii~~~S~hKtL~gltqgs~i~v~~~i~~~~~~~~~~~~~S------TSpsy~~~AsldaA~~~ 415 (715)
T 3n75_A 342 IYEGKCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDVNEETFNEAYMMHTT------TSPHYGIVASTETAAAM 415 (715)
T ss_dssp GGTTSSTTSSSCCTTCEEEEEECHHHHSSCCTTCEEEEEESCCCHHHHHHHHHHTSC------SSCCHHHHHHHHHHHHH
T ss_pred ccccccccccCcCCCEEEEEEecccccccCCCCeeEEEeCchhhHHHHHHHHHhhcC------CCchHHHHHHHHHHHHH
Confidence 22111112221125654 89999999998899999998752 1112111122211 12221222233344555
Q ss_pred hChhcHHHHHHHHHHHHHHHHHHHHhcC-------CeEeecC------------------------------CeeEEEEe
Q 011842 361 KGYKGFQKEVQKCLRNAHYLKDRLLDAG-------ISAMLNE------------------------------LSSTVVFE 403 (476)
Q Consensus 361 ~g~~g~~~~~~~~~~~a~~l~~~L~~~g-------~~~~~~~------------------------------~~~iv~f~ 403 (476)
+....-+++++++.+++++|++.|++.+ +..+.++ .+- +.+.
T Consensus 416 ~~~~~g~~~~~~l~~~a~~~r~~L~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~gf~~~~~~~~~~Dp~K-l~i~ 494 (715)
T 3n75_A 416 MKGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIK-VTLL 494 (715)
T ss_dssp HSHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCEESSCSCCCSCSCEECCTTCCTTCCTTCCSSSEEECTTE-EEEE
T ss_pred HHhhccHHHHHHHHHHHHHHHHHHHHhhhhcccceeeccCcccccchhhhccCcccccccccccccCcccCCCeE-EEEE
Confidence 4322235688999999999999998763 1221111 001 1122
Q ss_pred cCC------------c----HHHhhceeec---ccCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHh
Q 011842 404 RPQ------------D----EEFVRRWQLA---CQGNIAHVVVMPNVTIDKLDDFLNELIENRSTWYE 452 (476)
Q Consensus 404 ~~~------------~----~~~~~~~~l~---~~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~~ 452 (476)
.++ + .+++++..+. +..+.+-+.+++..|++++++++++|.++.+.+.+
T Consensus 495 ~~~~~~~G~~~~~Gi~g~~~~~~L~~~~I~~E~~d~~~vl~l~s~g~~~~~~~~L~~aL~~~~~~~~~ 562 (715)
T 3n75_A 495 TPGMEKDGTMSDFGIPASIVAKYLDEHGIVVEKTGPYNLLFLFSIGIDKTKALSLLRALTDFKRAFDL 562 (715)
T ss_dssp CSCBCTTSCBCSSCCCHHHHHHHHHHTTCCCSEEETTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCCCCCccccCCCcHHHHHHHHHHCCCEEEecCCCcEEEEeCCCCCHHHHHHHHHHHHHHHHHhhc
Confidence 221 0 1122222332 23466777789999999999999999998765543
No 179
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.85 E-value=2.5e-20 Score=190.29 Aligned_cols=269 Identities=14% Similarity=0.130 Sum_probs=189.0
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHH----HHHHcCCeEEEEeCC
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFK----AARMYRMECVKVDCL 214 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~----~~~~~G~~v~~v~~~ 214 (476)
....++++.+++++|.+ ..+++++||+|+..++. ... +++.|+++.+.|.+... .++..|++++.+|++
T Consensus 55 ~~~~~lr~~la~~~g~~----~~i~~~sGt~a~~~al~-~~~--~gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~ 127 (393)
T 1n8p_A 55 PNRENLERAVAALENAQ----YGLAFSSGSATTATILQ-SLP--QGSHAVSIGDVYGGTHRYFTKVANAHGVETSFTNDL 127 (393)
T ss_dssp HHHHHHHHHHHHHTTCS----EEEEESCHHHHHHHHHH-TSC--SSCEEEEESSCCHHHHHHHHHTSTTTCSCCEEESSH
T ss_pred hhHHHHHHHHHHHhCCC----cEEEECChHHHHHHHHH-HcC--CCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEeCCC
Confidence 44556777888999886 26677777999999988 543 88999999999986544 345669999999876
Q ss_pred CCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHh----CCCCCceEEEEecCcccccccccccCC
Q 011842 215 ISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEES----GFTQDRFYIHCDGALFGLMMPFVKKAP 290 (476)
Q Consensus 215 ~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~----g~~~~~~~lhvD~a~~g~~~~~~~~~~ 290 (476)
| ++|+++|++++ .+|++++++|++|.+.|+++|+++|++| |+ ++|+|++|+.+... ..
T Consensus 128 -----d-~~l~~~i~~~t---~lv~~~~~~nptG~~~~l~~i~~la~~~~~~~~~-----~livD~a~~~~~~~--~~-- 189 (393)
T 1n8p_A 128 -----L-NDLPQLIKENT---KLVWIETPTNPTLKVTDIQKVADLIKKHAAGQDV-----ILVVDNTFLSPYIS--NP-- 189 (393)
T ss_dssp -----H-HHHHHHSCSSE---EEEEECSSCTTTCCCCCHHHHHHHHHHHTTTTTC-----EEEEECTTTHHHHC--CG--
T ss_pred -----h-HHHHHhcccCc---eEEEEECCCCCcceecCHHHHHHHHHHhCCCCCC-----EEEEeCCccccccC--CH--
Confidence 7 89999886544 4888889999999999999999999999 99 99999999866542 11
Q ss_pred CCCCcccccEEEEcCCCCCCCC-CCc-eeEEee-hhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHH
Q 011842 291 KVSFKKPIGSVSVSGHKFVGCP-MPC-GVQITR-MEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQ 367 (476)
Q Consensus 291 ~~~~~~~~Dsi~~s~hK~l~~p-~~~-G~l~~~-~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~ 367 (476)
+. ..+|+++.|+||+++.+ +++ |+++++ +++++.+...... .+++. .....|+++..+ +.+.
T Consensus 190 -~~--~~~di~~~S~sK~~g~~G~rigG~~~~~~~~~~~~l~~~~~~--------~g~~~--~~~~~~~~~~~l--~~~~ 254 (393)
T 1n8p_A 190 -LN--FGADIVVHSATKYINGHSDVVLGVLATNNKPLYERLQFLQNA--------IGAIP--SPFDAWLTHRGL--KTLH 254 (393)
T ss_dssp -GG--GTCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHH--------HCCCC--CHHHHHHHHHHH--TTHH
T ss_pred -HH--cCCeEEEEECcccccCCCCceeEEEEeCCHHHHHHHHHHHHh--------cCCCC--CHHHHHHHHhcc--chHH
Confidence 11 13899999999999843 236 888886 4555544321111 11221 134444444433 4467
Q ss_pred HHHHHHHHHHHHHHHHHHhcCC-eE-e-ec---------------C--C-eeEEEEecCCc----HHHhhceee-----c
Q 011842 368 KEVQKCLRNAHYLKDRLLDAGI-SA-M-LN---------------E--L-SSTVVFERPQD----EEFVRRWQL-----A 417 (476)
Q Consensus 368 ~~~~~~~~~a~~l~~~L~~~g~-~~-~-~~---------------~--~-~~iv~f~~~~~----~~~~~~~~l-----~ 417 (476)
..+++..++++.+.+.|++.+. .. + .+ + . .+++.|..++. ..+...+.+ +
T Consensus 255 ~~~~~~~~~~~~l~~~L~~~~~~l~~v~~p~l~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~l~~l~~~~~~~s 334 (393)
T 1n8p_A 255 LRVRQAALSANKIAEFLAADKENVVAVNYPGLKTHPNYDVVLKQHRDALGGGMISFRIKGGAEAASKFASSTRLFTLAES 334 (393)
T ss_dssp HHHHHHHHHHHHHHHHHTSCTTTEEEEECTTSTTSTTHHHHHHHSGGGCCCSEEEEEESSCHHHHHHHHHHCSSSEECSC
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCceEEECCCCCCCccHHHHHhhCCCCCCccEEEEEeCCcHHHHHHHHhhCCcceECCC
Confidence 7778888888999999988754 21 2 11 1 2 56788877642 122222210 0
Q ss_pred --------------c--------------cCCEEEEEEcCCCCHHHHHHHHHHHHHHH
Q 011842 418 --------------C--------------QGNIAHVVVMPNVTIDKLDDFLNELIENR 447 (476)
Q Consensus 418 --------------~--------------~~~~lRv~~~~~~T~edid~~~~~l~~~~ 447 (476)
. ..+.+|+++...+|+++|+.+.++|+++.
T Consensus 335 ~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~iRlS~g~~~~~~~i~~l~~al~~~~ 392 (393)
T 1n8p_A 335 LGGIESLLEVPAVMTHGGIPKEAREASGVFDDLVRISVGIEDTDDLLEDIKQALKQAT 392 (393)
T ss_dssp CCCSSCEEECTTTTTSCSSCTTTTTTTSCCTTEEEEECCSSCHHHHHHHHHHHHHHHH
T ss_pred CCCCcceeeccccccccccCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHHhh
Confidence 0 02689999999999999999999998753
No 180
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.85 E-value=3.2e-19 Score=183.77 Aligned_cols=294 Identities=11% Similarity=-0.015 Sum_probs=178.2
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhh------CCCcEEEecCCCchHHHHHHHHcCC------
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREV------FPDGILYASRESHYSVFKAARMYRM------ 206 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~------~p~~~Vl~s~~~H~S~~~~~~~~G~------ 206 (476)
+...++.++++++++.+.+ ++++|+||++|+..++.+++.. .+++.|++.++.|+.+...+..++.
T Consensus 72 ~~~~~l~~~la~~~~~~~~--~v~~~~gg~ea~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~ 149 (430)
T 3i4j_A 72 DVLEEYAGRLARFVGLPTF--RFWAVSGGSEATESAVKLARQYHVERGEPGRFKVITRVPSYHGASLGSLAASGMGARRE 149 (430)
T ss_dssp HHHHHHHHHHHHHTTCTTC--EEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTC-------------------
T ss_pred HHHHHHHHHHHHhCCCCCC--EEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEeCCcCCCCcccccccCcccccc
Confidence 6777888999999987654 5999999999999999988753 3467888888877665543333322
Q ss_pred ---------eEEEEeCCCC---CccCHHHHHHHHHcCC-CCcEEEEEeeCCC-ccccccC----HHHHHHHHHHhCCCCC
Q 011842 207 ---------ECVKVDCLIS---GEIDCADFKAKLLQNK-DKPAIINVNIGTT-VKGAVDD----LDLVIQTLEESGFTQD 268 (476)
Q Consensus 207 ---------~v~~v~~~~~---g~~D~~~Le~~l~~~~-~~p~~vv~t~gtt-~tG~id~----l~~I~~ia~~~g~~~~ 268 (476)
++..+|.+.. +..|+++|+++|++.. +.+.+|+++...+ ++|.+.+ +++|.++|++||+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~--- 226 (430)
T 3i4j_A 150 LYTPLMRPEAWPKLPKPDPARNGAEDAEGLRALLEREGPETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGI--- 226 (430)
T ss_dssp ------CGGGSCEECCCCTTSCHHHHHTHHHHHHHHHCGGGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTC---
T ss_pred ccCCcCCCCCceEcCCCcccchhhHHHHHHHHHHHhcCCCCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCC---
Confidence 3444554432 4568899999997532 2334666666567 8888777 9999999999999
Q ss_pred ceEEEEecCcccccccccccCCCCCCc-c-cccEEEEcCCCCCCCC-CCceeEEeehhhhhhhcCCc-cccCCCCCcccC
Q 011842 269 RFYIHCDGALFGLMMPFVKKAPKVSFK-K-PIGSVSVSGHKFVGCP-MPCGVQITRMEHINVLSSNV-EYLASRDATIMG 344 (476)
Q Consensus 269 ~~~lhvD~a~~g~~~~~~~~~~~~~~~-~-~~Dsi~~s~hK~l~~p-~~~G~l~~~~~~~~~l~~~~-~yl~~~~~~~~~ 344 (476)
++|+|++|.++.... ... ..... . ..|.++++ |.++.+ +++|++++++++++.+.... .+... .++.
T Consensus 227 --~li~DEv~~~~~~~g-~~~-~~~~~~~~~~di~t~s--K~l~~G~~r~G~~~~~~~i~~~~~~~~~~~~~~--~t~~- 297 (430)
T 3i4j_A 227 --IFIADEVMSGMGRCG-SPL-ALSRWSGVTPDIAVLG--KGLAAGYAPLAGLLAAPQVYETVMGGSGAFMHG--FTYA- 297 (430)
T ss_dssp --EEEEECTTTTTTTTS-SSS-GGGGTTTCCCSEEEEC--GGGTTTSSCCEEEEECHHHHHHHHHTTCBCCCC--CTTT-
T ss_pred --EEEEechhhCCCccc-chh-hhhhhcCCCCcEEEEc--ccccCCccccEEEEECHHHHHHHhccCCccccc--CCCC-
Confidence 999999998653221 110 01111 1 25677654 988888 99999999988776664321 11111 1111
Q ss_pred CCCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHh----cCCeEeecCCeeEEEEecCCc------------H
Q 011842 345 SRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLD----AGISAMLNELSSTVVFERPQD------------E 408 (476)
Q Consensus 345 sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~g~~~~~~~~~~iv~f~~~~~------------~ 408 (476)
..++.+.+++..+..-.-++.+++..++.+++++.|++ .+.....++..+++.+..++. .
T Consensus 298 ----~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 373 (430)
T 3i4j_A 298 ----GHPVSVAAGLSVLDIVEREDLTGAAKERGAQLLAGLQALQARFPQMMQVRGTGLLLGVVLGDLATGQAFETPGIAS 373 (430)
T ss_dssp ----TCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEEC------------CHH
T ss_pred ----CCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEEEEEEEEeccccccCCCccHHHHH
Confidence 12344444444432111134556666666666666655 343333333344444443210 1
Q ss_pred HHh-----hceee-cc-------cCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 011842 409 EFV-----RRWQL-AC-------QGNIAHVVVMPNVTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 409 ~~~-----~~~~l-~~-------~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~ 450 (476)
++. ++..+ +. .++.+|++++..+|+++|++++++|+++.++.
T Consensus 374 ~~~~~l~~~Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~ 428 (430)
T 3i4j_A 374 RIGAAALKRGLITYPGSGAEPNGRGDHLLLGPPLSITAAEVDGLLALLAGALEDV 428 (430)
T ss_dssp HHHHHHHHTTEECC-----------CEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCEEEecccccCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence 221 23333 22 25789998888899999999999999988754
No 181
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.85 E-value=1.2e-19 Score=188.91 Aligned_cols=292 Identities=15% Similarity=0.158 Sum_probs=182.4
Q ss_pred HHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhh--CCCcE---EEecCCCc-hHHHHHHHHcCCeEEEEeCC--
Q 011842 143 GVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREV--FPDGI---LYASRESH-YSVFKAARMYRMECVKVDCL-- 214 (476)
Q Consensus 143 ~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~--~p~~~---Vl~s~~~H-~S~~~~~~~~G~~v~~v~~~-- 214 (476)
++++++++++|.+ .+++|+|||+|+..++.+++.. .||+. |+++ ..| .++..++...|++++.++.+
T Consensus 80 ~l~~~la~~~~~~----~v~~t~ggt~A~~~al~~~~~~~~~~Gd~~~~viv~-~~~~~~~~~~~~~~g~~~~~~~~~~~ 154 (467)
T 1ax4_A 80 DLKDKAKELFNYD----YIIPAHQGRGAENILFPVLLKYKQKEGKAKNPVFIS-NFHFDTTAAHVELNGCKAINIVTEKA 154 (467)
T ss_dssp HHHHHHHHHHCCC----EEEEESSHHHHHHHHHHHHHHHHHHTTCCSSCEEEE-SSCCHHHHHHHHHTTCEEEECBCGGG
T ss_pred HHHHHHHHHcCCC----cEEEcCCcHHHHHHHHHHHHHhhccCCCccceEEEe-ccccchhhHHHhccCCceeccccccc
Confidence 4455667777764 3999999999999999988652 16776 7777 555 55577788889988876542
Q ss_pred --------CCCccCHHHHHHHHHcCC-CCcEEEEEeeCCCcc-ccc---cCHHHHHHHHHHhCCCCCceEEEEecCccc-
Q 011842 215 --------ISGEIDCADFKAKLLQNK-DKPAIINVNIGTTVK-GAV---DDLDLVIQTLEESGFTQDRFYIHCDGALFG- 280 (476)
Q Consensus 215 --------~~g~~D~~~Le~~l~~~~-~~p~~vv~t~gtt~t-G~i---d~l~~I~~ia~~~g~~~~~~~lhvD~a~~g- 280 (476)
.++.+|+++|+++|++.+ .++.+|+++.+++++ |.+ +++++|+++|++||+ |+|+|++++.
T Consensus 155 ~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~gi-----~li~De~~~~~ 229 (467)
T 1ax4_A 155 FDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGI-----FVVMDSARFCE 229 (467)
T ss_dssp GCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTC-----CEEEECTTHHH
T ss_pred ccccccCCcccccCHHHHHHHHHhcCCCCeeEEEEeccccCCCccCCChhHHHHHHHHHHHcCC-----EEEEEchhhhh
Confidence 146799999999998632 234588888889999 665 568899999999999 9999999753
Q ss_pred ccc-c-----ccccCCCCCCc----ccccEEEEcCCCCCCCCCCceeEEee-h-hhhhhhcCCccccCCCCCcccCCCCC
Q 011842 281 LMM-P-----FVKKAPKVSFK----KPIGSVSVSGHKFVGCPMPCGVQITR-M-EHINVLSSNVEYLASRDATIMGSRNG 348 (476)
Q Consensus 281 ~~~-~-----~~~~~~~~~~~----~~~Dsi~~s~hK~l~~p~~~G~l~~~-~-~~~~~l~~~~~yl~~~~~~~~~sr~~ 348 (476)
+.+ . .....+..+.. ..+|++++++||+++.|.| |+++.+ + ++++.+.....+..+ ....++.+.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~g~~~G-g~~~~~d~~~l~~~~~~~~~~~~~--~~~~~~~~~ 306 (467)
T 1ax4_A 230 NAYFIKARDPKYKNATIKEVIFDMYKYADALTMSAKKDPLLNIG-GLVAIRDNEEIFTLARQRCVPMEG--FVTYGGLAG 306 (467)
T ss_dssp HHHHHHHHCGGGTTCCHHHHHHHHGGGCSEEEEETTSTTCCSSC-EEEEESSCHHHHHHHHHHHHHHTC--STTTTTCCH
T ss_pred cchhccccccccCCCchhhhhhhhccccceEEEeccccCCCCcc-eEEEeCCHHHHHHHHHhhcccccc--ccccCCccc
Confidence 111 0 00000000111 2378999999999986633 666666 4 555443211111110 001122221
Q ss_pred hhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEe-------cCC----cHHHhh-----
Q 011842 349 HAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFE-------RPQ----DEEFVR----- 412 (476)
Q Consensus 349 ~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~-------~~~----~~~~~~----- 412 (476)
.....+..++.... + ++.+++..++++++.+.|++.++....+..+..+.+. .+. ..++.+
T Consensus 307 ~~~~a~~~~l~~~~-~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 383 (467)
T 1ax4_A 307 RDMAAMVQGLEEGT-E--EEYLHYRIGQVKYLGDRLREAGIPIQYPTGGHAVFVDCKKLVPQIPGDQFPAQAVINALYLE 383 (467)
T ss_dssp HHHHHHHHHHHHTT-C--HHHHHHHHHHHHHHHHHHHHTTCCBCSSCCSSEEEEESTTTCTTSCGGGCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhh-h--hhHHHHHHHHHHHHHHHHHhCCCCcccCCCceEEEEehhhhccccccCCCCHHHHHHHHHHh
Confidence 11112222343321 1 2345555677888999998866654444455666666 321 122222
Q ss_pred -ceeecc------------c------CCEEEEEEcCC-CCHHHHHHHHHHHHHHHHHH
Q 011842 413 -RWQLAC------------Q------GNIAHVVVMPN-VTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 413 -~~~l~~------------~------~~~lRv~~~~~-~T~edid~~~~~l~~~~~~~ 450 (476)
+..+.. . .+.+|+++... +|++||+++++.|+++.++.
T Consensus 384 ~gv~v~~~g~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~~~ 441 (467)
T 1ax4_A 384 SGVRAVEIGSFLLGRDPATGEQKHADMEFMRLTIARRVYTNDHMDYIADALIGLKEKF 441 (467)
T ss_dssp HCEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTSSCHHHHHHHHHHHHTTHHHH
T ss_pred cCceeeecCccccccccccccccccccceEEEecccccCCHHHHHHHHHHHHHHHHhh
Confidence 222211 1 26899988744 89999999999999988764
No 182
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.85 E-value=5.8e-20 Score=190.70 Aligned_cols=285 Identities=15% Similarity=0.078 Sum_probs=189.1
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchH-HHHH--HHH--cCCeEEEEeC
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYS-VFKA--ARM--YRMECVKVDC 213 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S-~~~~--~~~--~G~~v~~v~~ 213 (476)
.++...++++++++|.+. ..+++++||+||..++.+++. ||+.|+++.++|.+ +... ... .+..++.++.
T Consensus 91 ~~e~~a~~~la~~~g~~~---~~v~~~sGs~a~~~a~~~~~~--~Gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 165 (447)
T 3h7f_A 91 VVENLARDRAKALFGAEF---ANVQPHSGAQANAAVLHALMS--PGERLLGLDLANGGHLTHGMRLNFSGKLYENGFYGV 165 (447)
T ss_dssp HHHHHHHHHHHHHHTCSE---EECCCSSHHHHHHHHHHHHCC--TTCEEEEECGGGTCCGGGTCTTSHHHHSSEEEEECC
T ss_pred HHHHHHHHHHHHHcCCCc---eEEEeCCHHHHHHHHHHHhcC--CCCEEEecCcccccccchhhhhhhcCCeeEEEEcCc
Confidence 344444499999999874 133388999999999988876 99999999999866 2111 112 2445666776
Q ss_pred C-CCCccCHHHHHHHHHc-CCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCC
Q 011842 214 L-ISGEIDCADFKAKLLQ-NKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPK 291 (476)
Q Consensus 214 ~-~~g~~D~~~Le~~l~~-~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~ 291 (476)
+ +++.+|+++|++++.+ +++ +|+++.+.++++. ++++|.++|++||+ ++|+|++|+.+........
T Consensus 166 ~~~~~~~d~~~l~~~i~~~~~~---~i~~~~~~~~~~~--~l~~i~~l~~~~g~-----lli~Dea~~~g~~~~g~~~-- 233 (447)
T 3h7f_A 166 DPATHLIDMDAVRATALEFRPK---VIIAGWSAYPRVL--DFAAFRSIADEVGA-----KLLVDMAHFAGLVAAGLHP-- 233 (447)
T ss_dssp CTTTCSCCHHHHHHHHHHHCCS---EEEEECSSCCSCC--CHHHHHHHHHHHTC-----EEEEECTTTHHHHHTTSSC--
T ss_pred CcccCCcCHHHHHHHHHhcCCe---EEEEcCCCCCCcc--CHHHHHHHHHHcCC-----EEEEECCchhhhhcCCCCC--
Confidence 6 4678999999999965 343 6667666666554 99999999999999 9999999864332211111
Q ss_pred CCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCC-ccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHH
Q 011842 292 VSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSN-VEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEV 370 (476)
Q Consensus 292 ~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~-~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~ 370 (476)
.....+|+++.++||++++ ++.|+++.++++.+.+... ..+ ..++.......++.+++.......+++..
T Consensus 234 -~~~~~~di~~~s~sK~l~G-~~gG~i~~~~~~~~~l~~~~~~~-------~~~~~~~~~~~a~~~a~~~~~~~~~~~~~ 304 (447)
T 3h7f_A 234 -SPVPHADVVSTTVHKTLGG-GRSGLIVGKQQYAKAINSAVFPG-------QQGGPLMHVIAGKAVALKIAATPEFADRQ 304 (447)
T ss_dssp -CSTTTCSEEEEESSGGGCC-CSCEEEEECGGGHHHHHHHHTTT-------TCSSCCHHHHHHHHHHHHHTTSHHHHHHH
T ss_pred -CCCCCCcEEEecCCcCCCC-CCeEEEEECHHHHHHHhhhcCCc-------ccCCccHHHHHHHHHHHHHhhCHHHHHHH
Confidence 1113479999999999975 4569999988765544221 111 12222222234444555554455778899
Q ss_pred HHHHHHHHHHHHHHHhc-----CCeEeec-CCeeEEEEecCC---c-HH---Hh-h-ceeec-----------ccCCEEE
Q 011842 371 QKCLRNAHYLKDRLLDA-----GISAMLN-ELSSTVVFERPQ---D-EE---FV-R-RWQLA-----------CQGNIAH 424 (476)
Q Consensus 371 ~~~~~~a~~l~~~L~~~-----g~~~~~~-~~~~iv~f~~~~---~-~~---~~-~-~~~l~-----------~~~~~lR 424 (476)
++..++++++.+.|++. |+..+.. ..++++.+.... + .. .. + ++.+. ...+.+|
T Consensus 305 ~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GI~v~~~~i~~~~~~p~~~~~lR 384 (447)
T 3h7f_A 305 RRTLSGARIIADRLMAPDVAKAGVSVVSGGTDVHLVLVDLRDSPLDGQAAEDLLHEVGITVNRNAVPNDPRPPMVTSGLR 384 (447)
T ss_dssp HHHHHHHHHHHHHHTSHHHHHTTCEEGGGSCSSSEEEEECTTSSCCHHHHHHHHHHTTEECBC-------------CEEE
T ss_pred HHHHHHHHHHHHHHHhccccCCCeEEecCCCCCCEEEEEcCCCCCCHHHHHHHHHHCCeEEecccCCCCCCCCCCCCcee
Confidence 99999999999999988 7765442 345555555432 1 11 11 1 33322 1235688
Q ss_pred EEEcC----CCCHHHHHHHHHHHHHHHHH
Q 011842 425 VVVMP----NVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 425 v~~~~----~~T~edid~~~~~l~~~~~~ 449 (476)
+++.. ..|++||+++++.|.++.+.
T Consensus 385 ig~~~~~~~~~~~eei~~~~~~l~~~l~~ 413 (447)
T 3h7f_A 385 IGTPALATRGFGDTEFTEVADIIATALAT 413 (447)
T ss_dssp EECHHHHHHTCCHHHHHHHHHHHHHHHHS
T ss_pred ccCHHHhhCCCCHHHHHHHHHHHHHHHhc
Confidence 87543 37899999999999988754
No 183
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.85 E-value=5.1e-19 Score=181.64 Aligned_cols=290 Identities=13% Similarity=0.024 Sum_probs=180.7
Q ss_pred HHHHHHHHHHHHHc-CCCCCcccEEEcCCchhHHHHHHHHHHhh-CCCcEEEecCCCc-hHHHHHHHHcCCe--------
Q 011842 139 QFEVGVLDWFARLW-ELENNEYWGYITNCGTEGNLHGILVGREV-FPDGILYASRESH-YSVFKAARMYRME-------- 207 (476)
Q Consensus 139 ~le~~~~~~la~l~-g~~~~~~~g~~t~ggt~An~~al~aa~~~-~p~~~Vl~s~~~H-~S~~~~~~~~G~~-------- 207 (476)
....++++.+++++ | + .+..+++|+||++|+..++..++.. .++ .|++.+++| .++..++...|.+
T Consensus 84 ~~~~~l~~~la~~~~~-~-~~~~v~~~~g~~~a~~~~~~~a~~~~~~~-~vi~~~p~y~~~~~~~~~~~g~~~~~~~~~~ 160 (426)
T 1sff_A 84 EPYLELCEIMNQKVPG-D-FAKKTLLVTTGSEAVENAVKIARAATKRS-GTIAFSGAYHGRTHYTLALTGKVNPYSAGMG 160 (426)
T ss_dssp HHHHHHHHHHHHHSSC-S-SCEEEEEESSHHHHHHHHHHHHHHHHTCC-EEEEETTCCCCSSHHHHHHSSCCTTTTTTSC
T ss_pred HHHHHHHHHHHHhCCc-c-cccEEEEeCchHHHHHHHHHHHHHhhCCC-eEEEECCCcCCCchHhhhhcCCccccccccC
Confidence 44556667777877 5 2 2245999999999999998854322 255 566655555 4555666666653
Q ss_pred -----EEEEeCCC-----CCccCHHHHHHHHHcC--CCCcEEEEEeeCCCccccccC----HHHHHHHHHHhCCCCCceE
Q 011842 208 -----CVKVDCLI-----SGEIDCADFKAKLLQN--KDKPAIINVNIGTTVKGAVDD----LDLVIQTLEESGFTQDRFY 271 (476)
Q Consensus 208 -----v~~v~~~~-----~g~~D~~~Le~~l~~~--~~~p~~vv~t~gtt~tG~id~----l~~I~~ia~~~g~~~~~~~ 271 (476)
++.+|.+. ++.+|+++|++++++. ..++.+|+++...+.+|.+.+ +++|.++|++||+ +
T Consensus 161 ~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~v~~~p~~~ntG~~~~~~~~l~~l~~l~~~~~~-----~ 235 (426)
T 1sff_A 161 LMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDAAPEDIAAIVIEPVQGEGGFYASSPAFMQRLRALCDEHGI-----M 235 (426)
T ss_dssp CCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTCCGGGEEEEEECSBCTTTTSCBCCHHHHHHHHHHHHHHTC-----E
T ss_pred CCCCCcEEeCCCccccccchHHHHHHHHHHHHhccCCCceEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCC-----E
Confidence 77777753 2358999999999742 123446666543334997777 9999999999999 9
Q ss_pred EEEecCcccccccccccCCCCCCcc-cccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChh
Q 011842 272 IHCDGALFGLMMPFVKKAPKVSFKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHA 350 (476)
Q Consensus 272 lhvD~a~~g~~~~~~~~~~~~~~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~ 350 (476)
+++|++|+++.... ... .++... .+|++ +++|+++.++++|++++++++++.+.... + ..+ .+.+...
T Consensus 236 li~De~~~~~~~~g-~~~-~~~~~~~~~di~--s~sK~~~~GlriG~~~~~~~~~~~l~~~~-~----~~~--~~~~~~~ 304 (426)
T 1sff_A 236 LIADEVQSGAGRTG-TLF-AMEQMGVAPDLT--TFAKSIAGGFPLAGVTGRAEVMDAVAPGG-L----GGT--YAGNPIA 304 (426)
T ss_dssp EEEECTTTTTTTTS-SSS-GGGGTTSCCSEE--EECGGGGTSSCCEEEEEEHHHHTTSCTTS-B----CCS--SSSCHHH
T ss_pred EEEechhhccCccc-chh-hhhhcCCCCCEE--EEcccccCCCceEEEEEcHHHHhhhccCC-c----CcC--CCCCHHH
Confidence 99999998643211 110 011111 26766 45699987788999999988766553210 1 011 1111122
Q ss_pred HHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhc----CCeEeecCCeeEEEEecC--------C---cHHHh----
Q 011842 351 PIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDA----GISAMLNELSSTVVFERP--------Q---DEEFV---- 411 (476)
Q Consensus 351 ~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----g~~~~~~~~~~iv~f~~~--------~---~~~~~---- 411 (476)
...+.++++.+..+ +..++..++++++.++|++. +......+..+++.+..+ . ..++.
T Consensus 305 ~~a~~aal~~~~~~---~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 381 (426)
T 1sff_A 305 CVAALEVLKVFEQE---NLLQKANDLGQKLKDGLLAIAEKHPEIGDVRGLGAMIAIELFEDGDHNKPDAKLTAEIVARAR 381 (426)
T ss_dssp HHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHHHHHTCTTEEEEEEETTEEEEEEBGGGCTTSBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEEEEEEEEEecCccccCCChHHHHHHHHHHH
Confidence 23333444444222 35667777888888888764 322222233456665542 1 12222
Q ss_pred -hceeec-cc--CCEEEEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 011842 412 -RRWQLA-CQ--GNIAHVVVMPNVTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 412 -~~~~l~-~~--~~~lRv~~~~~~T~edid~~~~~l~~~~~~~ 450 (476)
+++.+. .. .+.+|++++..+|+++|++++++|+++.+++
T Consensus 382 ~~gi~v~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~l~~~ 424 (426)
T 1sff_A 382 DKGLILLSCGPYYNVLRILVPLTIEDAQIRQGLEIISQCFDEA 424 (426)
T ss_dssp HTTEECEEESTTSCEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HCCcEEecCCCCCCEEEEECCccCCHHHHHHHHHHHHHHHHHH
Confidence 233332 22 4789999988999999999999999987654
No 184
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.85 E-value=5.3e-20 Score=188.52 Aligned_cols=267 Identities=13% Similarity=0.099 Sum_probs=184.9
Q ss_pred HHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHH----HHHcCCeEEEEeCCCC
Q 011842 141 EVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKA----ARMYRMECVKVDCLIS 216 (476)
Q Consensus 141 e~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~----~~~~G~~v~~v~~~~~ 216 (476)
..++++.+++++|.+ ..+++++|++|+..++. ... +++.|+++++.|.+.... ++..|++++.++.+
T Consensus 69 ~~~l~~~la~~~g~~----~~i~~~sG~~ai~~~~~-l~~--~gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~-- 139 (403)
T 3cog_A 69 RNCLEKAVAALDGAK----YCLAFASGLAATVTITH-LLK--AGDQIICMDDVYGGTNRYFRQVASEFGLKISFVDCS-- 139 (403)
T ss_dssp HHHHHHHHHHHHTCS----EEEEESCHHHHHHHHHT-TSC--TTCEEEEESSCCHHHHHHHHHTGGGGTCEEEEECTT--
T ss_pred HHHHHHHHHHHhCCC----cEEEECCHHHHHHHHHH-HhC--CCCEEEEeCCCcchHHHHHHHHHHHcCCEEEEECCC--
Confidence 344555677777875 25666677899888877 443 899999999999875443 45679999999986
Q ss_pred CccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhC-CCCCceEEEEecCcccccccccccCCCCCCc
Q 011842 217 GEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESG-FTQDRFYIHCDGALFGLMMPFVKKAPKVSFK 295 (476)
Q Consensus 217 g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g-~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~ 295 (476)
|+++|+++|++++ .+|++++++|++|.+.|+++|+++|++|| + ++++|++|+.+... . .++
T Consensus 140 ---d~~~l~~~i~~~t---~~v~~~~p~nptG~~~~l~~i~~la~~~g~~-----~livD~~~~~~~~~--~---~~~-- 201 (403)
T 3cog_A 140 ---KIKLLEAAITPET---KLVWIETPTNPTQKVIDIEGCAHIVHKHGDI-----ILVVDNTFMSPYFQ--R---PLA-- 201 (403)
T ss_dssp ---SHHHHHHHCCTTE---EEEEEESSCTTTCCCCCHHHHHHHHTSSSCC-----EEEEECTTTCTTTC--C---TTT--
T ss_pred ---CHHHHHHhcCcCC---eEEEEECCCCCCCeeeCHHHHHHHHHHcCCC-----EEEEECCCcccccC--C---ccc--
Confidence 8999999987654 48888999999999999999999999999 9 99999999876531 1 122
Q ss_pred ccccEEEEcCCCCCCCCCC--ceeEEee-hhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHHH
Q 011842 296 KPIGSVSVSGHKFVGCPMP--CGVQITR-MEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQK 372 (476)
Q Consensus 296 ~~~Dsi~~s~hK~l~~p~~--~G~l~~~-~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~ 372 (476)
..+|+++.|+||++++|.+ +|+++++ +++.+.+....... ..+ ...+.+|++++.+ +.+..++++
T Consensus 202 ~~~div~~S~sK~~~g~~~~~~G~v~~~~~~l~~~l~~~~~~~-------g~~---~~~~~~~~~~~~l--~~l~~r~~~ 269 (403)
T 3cog_A 202 LGADISMYSATKYMNGHSDVVMGLVSVNCESLHNRLRFLQNSL-------GAV---PSPIDCYLCNRGL--KTLHVRMEK 269 (403)
T ss_dssp TTCSEEEEETTTTTTCSSCCCCEEEEECCHHHHHHHHHHHHHH-------CCC---CCHHHHHHHHHHH--TTHHHHHHH
T ss_pred cCCeEEEEcChhhccCCCCCeEEEEEECcHHHHHHHHHHHHhc-------CCC---CCHHHHHHHHhhh--hHHHHHHHH
Confidence 2489999999999997764 6999986 45555443211111 111 1245666666544 345666777
Q ss_pred HHHHHHHHHHHHHhcCCeE--------------eecC----CeeEEEEecCCc-H---HHhhceee---c----------
Q 011842 373 CLRNAHYLKDRLLDAGISA--------------MLNE----LSSTVVFERPQD-E---EFVRRWQL---A---------- 417 (476)
Q Consensus 373 ~~~~a~~l~~~L~~~g~~~--------------~~~~----~~~iv~f~~~~~-~---~~~~~~~l---~---------- 417 (476)
..+++..+.+.|++.+... +..+ ..+++.|..++. . .+.+...+ .
T Consensus 270 ~~~n~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~l~~~~i~~~~~s~G~~~sl~ 349 (403)
T 3cog_A 270 HFKNGMAVAQFLESNPWVEKVIYPGLPSHPQHELVKRQCTGCTGMVTFYIKGTLQHAEIFLKNLKLFTLAESLGGFESLA 349 (403)
T ss_dssp HHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESSCHHHHHHHHHHCSSSEECSCCSSSSCEE
T ss_pred HHHHHHHHHHHHhcCCCEEEEECCCCCCCCcHHHHHhcCCCCceEEEEEecCCHHHHHHHHHhCCcceEccCCCCcceee
Confidence 7778877888877653211 1111 256777776532 1 22322221 0
Q ss_pred --c----------------c--CCEEEEEEcCCCCHHHHHHHHHHHHHH
Q 011842 418 --C----------------Q--GNIAHVVVMPNVTIDKLDDFLNELIEN 446 (476)
Q Consensus 418 --~----------------~--~~~lRv~~~~~~T~edid~~~~~l~~~ 446 (476)
+ . .+.+|+++...+++++|++|.++|+++
T Consensus 350 ~~p~~~~~~~~~~~~~~~~g~~~~~iRlSvg~e~~~d~i~~l~~al~~~ 398 (403)
T 3cog_A 350 ELPAIMTHASVLKNDRDVLGISDTLIRLSVGLEDEEDLLEDLDQALKAA 398 (403)
T ss_dssp ECTTTTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred ecccccccccCCHHHHHhcCCCcCeEEEEeCCCCHHHHHHHHHHHHHHh
Confidence 0 1 368999999999999999888888765
No 185
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.85 E-value=2.9e-20 Score=190.48 Aligned_cols=235 Identities=11% Similarity=0.086 Sum_probs=172.0
Q ss_pred HHHHHHHHHHHcCCCCCcccEEE---cCCchhHHHHHHHHHHhhCCCcEEEecC-CCchHHHHH----------HHHcCC
Q 011842 141 EVGVLDWFARLWELENNEYWGYI---TNCGTEGNLHGILVGREVFPDGILYASR-ESHYSVFKA----------ARMYRM 206 (476)
Q Consensus 141 e~~~~~~la~l~g~~~~~~~g~~---t~ggt~An~~al~aa~~~~p~~~Vl~s~-~~H~S~~~~----------~~~~G~ 206 (476)
.+++.+.+++++|.+. .++ |+|||+||..++.+... ||+.|++++ +.|..+... ++..|+
T Consensus 61 ~~~Le~~lA~l~g~e~----alv~p~~~sGt~Ai~~al~all~--~GD~Vl~~~~~~y~~~~~~~~~~g~~~~~l~~~G~ 134 (409)
T 3jzl_A 61 RDTLERVYATVFKTEA----ALVRPQIISGTHAISTVLFGILR--PDDELLYITGQPYDTLEEIVGIRKQGQGSLKDFHI 134 (409)
T ss_dssp HHHHHHHHHHHHTCSE----EEEETTSCSHHHHHHHHHHHHCC--TTCEEEECSSSCCTTHHHHHTSSSSSSSCTGGGTC
T ss_pred HHHHHHHHHHHhCCCc----EEEECCCccHHHHHHHHHHHhcC--CCCEEEEeCCCCcHhHHHHHhcccchhhHHHHcCC
Confidence 4455667889999864 455 89999999999888765 999999998 888877643 456799
Q ss_pred eEEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEee----CCCccccccCHHHHHHHHHH--hCCCCCceEEEEecCccc
Q 011842 207 ECVKVDCLISGEIDCADFKAKLLQNKDKPAIINVNI----GTTVKGAVDDLDLVIQTLEE--SGFTQDRFYIHCDGALFG 280 (476)
Q Consensus 207 ~v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~----gtt~tG~id~l~~I~~ia~~--~g~~~~~~~lhvD~a~~g 280 (476)
+++.++++++|.+|+++|++++++++ .+|++++ +++++|.+.|+++|+++|++ ||+ ++|+|++|+.
T Consensus 135 ~~~~v~~~~~g~~d~e~l~~ai~~~t---klV~i~~s~g~p~nptg~v~~l~~I~~la~~~~~~~-----~livD~a~~~ 206 (409)
T 3jzl_A 135 GYSSVPLLENGDVDFPRIAKKMTPKT---KMIGIQRSRGYADRPSFTIEKIKEMIVFVKNINPEV-----IVFVDNCYGE 206 (409)
T ss_dssp EEEECCCCTTSCCCHHHHHHHCCTTE---EEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTC-----EEEEECTTCT
T ss_pred EEEEeCCCCCCCcCHHHHHHhccCCC---eEEEEECCCCCCCCCcCccccHHHHHHHHHhhCCCC-----EEEEeCCccc
Confidence 99999998889999999999997654 4888888 99999999999999999999 999 9999999986
Q ss_pred ccccccccCCCCCCcccccEEEEcCCCCCCCCC--CceeEEeehhhhhhhcC--CccccCCCCCcccCCCCChhHHHHHH
Q 011842 281 LMMPFVKKAPKVSFKKPIGSVSVSGHKFVGCPM--PCGVQITRMEHINVLSS--NVEYLASRDATIMGSRNGHAPIFLWY 356 (476)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~Dsi~~s~hK~l~~p~--~~G~l~~~~~~~~~l~~--~~~yl~~~~~~~~~sr~~~~~l~~~~ 356 (476)
++... .. . ...+|+++.|+||+++++. ..|+++.++++++.+.. ...++... .+..... .|+
T Consensus 207 ~~~~~-~p---~--~~g~Div~~S~sK~lgg~~~~~GG~v~~~~~li~~l~~~~~~~~~g~~----~g~~~~~----~~~ 272 (409)
T 3jzl_A 207 FVEYQ-EP---P--EVGADIIAGSLIKNPGGGLAKTGGYIAGKEALVDLCGYRLTTPGIGRE----AGASLYS----LLE 272 (409)
T ss_dssp TTSSC-CS---G--GGTCSEEEEETTSGGGTTTCSSCEEEEECHHHHHHHHHHHSCTTTGGG----CCCCTTC----HHH
T ss_pred ccccC-Cc---c--ccCCeEEEECccccCCccCCceEEEEEeCHHHHHHHHHHhcccccccc----ccccHHH----HHH
Confidence 55321 10 1 1248999999999998653 35888888877766533 11222110 1111111 123
Q ss_pred HHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCee-----EEEEecCC
Q 011842 357 TLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSS-----TVVFERPQ 406 (476)
Q Consensus 357 ~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~-----iv~f~~~~ 406 (476)
+++. ......++++..++++++.+.|++.|+.+ .+..+. ++.|..++
T Consensus 273 ~l~g--l~~~~~r~~~~~~~a~~la~~L~~~g~~v-~p~~~~~~~~~i~~i~l~~ 324 (409)
T 3jzl_A 273 MYQG--FFLAPHVTAQAIKGARFTAAMLAEFGVEA-DPVWDAPRTDLIQSVSFHN 324 (409)
T ss_dssp HHHH--HHHHHHHHHHHHHHHHHHHHHHHHTTCEE-ESCTTSCCSSSCCEEECSC
T ss_pred HHHH--HhhHHHHHHHHHHHHHHHHHHHHhCCCcc-cCCCCCCCccEEEEEEeCC
Confidence 3332 24456788899999999999999999865 433333 66677654
No 186
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=99.84 E-value=2.8e-19 Score=182.42 Aligned_cols=287 Identities=11% Similarity=0.026 Sum_probs=184.2
Q ss_pred hhHHHHHHHHHHHHHHcC-CCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCe-EEEEeC
Q 011842 136 HSRQFEVGVLDWFARLWE-LENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRME-CVKVDC 213 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g-~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~-v~~v~~ 213 (476)
+..++++++.+++. .| ++ ...+++|+|+++++..++. +.. |++.|+++.++|.++...++..|++ ++.+|+
T Consensus 76 g~~~lr~~la~~l~--~g~~~--~~~v~~~~G~~~al~~~~~-~~~--~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~ 148 (400)
T 3asa_A 76 GLPALRQKLSEDFY--RGFVD--AKEIFISDGAKVDLFRLLS-FFG--PNQTVAIQDPSYPAYLDIARLTGAKEIIALPC 148 (400)
T ss_dssp CCHHHHHHHHHTTS--TTSSC--GGGEEEESCHHHHHHHHHH-HHC--SSCEEEEEESCCHHHHHHHHHTTCSEEEEEEC
T ss_pred CCHHHHHHHHHHHH--cCCCC--HHHEEEccChHHHHHHHHH-HcC--CCCEEEECCCCcHHHHHHHHHcCCcceEeccc
Confidence 34567766555532 46 44 3469999999999887543 333 8899999999999999999999998 999998
Q ss_pred CCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCcccccccccccCC
Q 011842 214 LISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAP 290 (476)
Q Consensus 214 ~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~ 290 (476)
++++.++.+ +++. + ++.+|+++++.|+||.+.| +++|+++|++||+ ++++|++|+.+........+
T Consensus 149 ~~~~~~~~~-l~~~--~---~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~-----~li~De~~~~~~~~~~~~~~ 217 (400)
T 3asa_A 149 LQENAFFPE-FPED--T---HIDILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEI-----LILFDAAYSTFISDPSLPKS 217 (400)
T ss_dssp CGGGTTCCC-CCTT--C---CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTC-----EEEEECTTGGGCCCTTSCSS
T ss_pred chhcCcccC-hhhc--c---CccEEEEeCCCCCCCCcCCHHHHHHHHHHHHHcCC-----EEEEEchhhhhhcCCCCCCc
Confidence 754333321 2221 2 2347777889999999976 6778999999999 99999999865432111111
Q ss_pred CCCCcc--cccEEEEcCCCCCC-CCCCceeEEeehhh-------hhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHH
Q 011842 291 KVSFKK--PIGSVSVSGHKFVG-CPMPCGVQITRMEH-------INVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNR 360 (476)
Q Consensus 291 ~~~~~~--~~Dsi~~s~hK~l~-~p~~~G~l~~~~~~-------~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~ 360 (476)
...... ..+++..+++|+++ .++++|++++++++ ++.+...... ...++.+ .+.+.++...
T Consensus 218 ~~~~~~~~~~~i~~~s~sK~~g~~GlriG~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~---~~~~~a~~~~ 288 (400)
T 3asa_A 218 IFEIPDARFCAIEINSFSKPLGFAGIRLGWTVIPQELTYADGHFVIQDWERFLS------TTFNGAS---IPAQEAGVAG 288 (400)
T ss_dssp GGGSTTGGGTEEEEEECCGGGTTTTCCCEEEECCTTCBCTTSCBHHHHHHHHHH------HHCCCCC---HHHHHHHHHH
T ss_pred hhhCCCCCCceEEEecchhhcCCcchheeEEeeChhhccchhhhHHHHHHHHhc------cCccCCC---hHHHHHHHHH
Confidence 111111 13577899999996 77889999998876 3322110000 0011122 2333333333
Q ss_pred hChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEe-cCC---cHH----Hh-h-ceeecc-------cCCEE
Q 011842 361 KGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFE-RPQ---DEE----FV-R-RWQLAC-------QGNIA 423 (476)
Q Consensus 361 ~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~-~~~---~~~----~~-~-~~~l~~-------~~~~l 423 (476)
+....+++..++..++++++.+.|++.|+....++.++++.+. .+. ..+ +. + ++.+.. ..+.+
T Consensus 289 l~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~~g~~f~~~~~~~i 368 (400)
T 3asa_A 289 LSILPQLEAIHYYRENSDLLRKALLATGFEVFGGEHAPYLWVKPTQANISDRDLFDFFLREYHIAITPGIGFGRSGSGFV 368 (400)
T ss_dssp HHHTTTCHHHHHHHHHHHHHHHHHHHTTCEEEECSSSSEEEEECCCTTCCTTTHHHHHHHHHSEECEEGGGGCGGGTTCE
T ss_pred hCcHHHHHHHHHHHHHHHHHHHHHHHCCCeeeCCCCceEEEEeccCCCCCHHHHHHHHHHhCCEEEeChhHhCCCCCCEE
Confidence 3222466777888889999999999988755444456677777 552 112 22 1 343321 24679
Q ss_pred EEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 011842 424 HVVVMPNVTIDKLDDFLNELIENRSTWY 451 (476)
Q Consensus 424 Rv~~~~~~T~edid~~~~~l~~~~~~~~ 451 (476)
|+++ .+|+++|+++++.|+++.++..
T Consensus 369 Ris~--~~~~e~i~~~l~~l~~~~~~~~ 394 (400)
T 3asa_A 369 RFSS--LGKREDILAACERLQMAPALQS 394 (400)
T ss_dssp EEEC--CSCHHHHHHHHHHHHC------
T ss_pred EEEe--eCCHHHHHHHHHHHHHHHHhhh
Confidence 9984 5789999999999998876654
No 187
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.84 E-value=4.9e-20 Score=189.56 Aligned_cols=237 Identities=11% Similarity=0.081 Sum_probs=172.9
Q ss_pred HHHHHHHHHHHcCCCCCcccEEE---cCCchhHHHHHHHHHHhhCCCcEEEecC-CCchHHH-----------HHHHHcC
Q 011842 141 EVGVLDWFARLWELENNEYWGYI---TNCGTEGNLHGILVGREVFPDGILYASR-ESHYSVF-----------KAARMYR 205 (476)
Q Consensus 141 e~~~~~~la~l~g~~~~~~~g~~---t~ggt~An~~al~aa~~~~p~~~Vl~s~-~~H~S~~-----------~~~~~~G 205 (476)
..++.+.+++++|.+. .++ ++|||+||..++.+... ||+.|++++ +.|.... ..++..|
T Consensus 75 ~~~Le~~lA~l~g~e~----alv~p~~~sGt~Ai~~al~all~--pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G 148 (427)
T 3i16_A 75 RDSLDAVYARVFNTES----ALVRPHFVNGTHALGAALFGNLR--PGNTMLSVCGEPYDTLHDVIGITENSNMGSLKEFG 148 (427)
T ss_dssp HHHHHHHHHHHHTCSE----EEEETTCCSHHHHHHHHHHHHCC--TTCEEEESSSSCCGGGHHHHTCSCCCSSCCTGGGT
T ss_pred HHHHHHHHHHHhCCcc----eEEeCCCccHHHHHHHHHHHHhC--CCCEEEEeCCCccHHHHHHHhccccchHHHHHHcC
Confidence 4455567899999864 455 89999999999888765 999999998 8887665 3445679
Q ss_pred CeEEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEee----CCCccccccCHHHHHHHHHH--hCCCCCceEEEEecCcc
Q 011842 206 MECVKVDCLISGEIDCADFKAKLLQNKDKPAIINVNI----GTTVKGAVDDLDLVIQTLEE--SGFTQDRFYIHCDGALF 279 (476)
Q Consensus 206 ~~v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~----gtt~tG~id~l~~I~~ia~~--~g~~~~~~~lhvD~a~~ 279 (476)
++++.++++++|.+|+++|++++.+. .++.+|++++ +++++|.+.|+++|+++|++ ||+ +++||++|+
T Consensus 149 ~~~~~v~~~~~g~~D~e~l~~~l~~~-~~tklV~i~~s~~~p~nptg~i~dl~~i~~la~~~~~g~-----~livD~a~~ 222 (427)
T 3i16_A 149 INYKQVDLKEDGKPNLEEIEKVLKED-ESITLVHIQRSTGYGWRRALLIEDIKSIVDCVKNIRKDI-----ICFVDNCYG 222 (427)
T ss_dssp CEEEECCCCTTSSCCHHHHHHHHHTC-TTEEEEEEECSCCSSSSCCCCHHHHHHHHHHHHHHCTTS-----EEEEECTTT
T ss_pred CEEEEecCccCCCcCHHHHHHHhhCC-CCCEEEEEEcCCCCCCCCcccHHHHHHHHHHHHHhCCCC-----EEEEECCCc
Confidence 99999999888999999999999831 1234888887 89999999999999999999 999 999999998
Q ss_pred cccccccccCCCCCCcccccEEEEcCCCCCCCC--CCceeEEeehhhhhhhcC--CccccCCCCCcccCCCCChhHHHHH
Q 011842 280 GLMMPFVKKAPKVSFKKPIGSVSVSGHKFVGCP--MPCGVQITRMEHINVLSS--NVEYLASRDATIMGSRNGHAPIFLW 355 (476)
Q Consensus 280 g~~~~~~~~~~~~~~~~~~Dsi~~s~hK~l~~p--~~~G~l~~~~~~~~~l~~--~~~yl~~~~~~~~~sr~~~~~l~~~ 355 (476)
.+.+... .....+|+++.|+||+++++ ...|+++.++++++.+.. ....+. ...+.. .. ..|
T Consensus 223 ~~~~~~~------p~~~gaDiv~~S~sK~lgg~g~~~gG~i~~~~~li~~l~~~~~~~~~g-----~~~~~~-~~--~a~ 288 (427)
T 3i16_A 223 EFMDTKE------PTDVGADLIAGSLIKNIGGGIAPTGGYLAGTKDCIEKTSYRLTVPGIG-----GECGST-FG--VVR 288 (427)
T ss_dssp TTSSSSC------GGGGTCSEEEEETTSGGGTTTCCSCEEEEECHHHHHHHHHHHSCTTTG-----GGCCCC-TT--CHH
T ss_pred cccccCC------ccccCCeEEEecCcccCCCCCCceEEEEEECHHHHHHHHHhcccCccC-----ccCCcc-HH--HHH
Confidence 6653210 01124899999999999853 456999999887766543 111111 011110 11 123
Q ss_pred HHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCee-----EEEEecCC
Q 011842 356 YTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSS-----TVVFERPQ 406 (476)
Q Consensus 356 ~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~-----iv~f~~~~ 406 (476)
.+++. ...+..++++..+++.++.+.|++.|+.+ .+..+. ++.|...+
T Consensus 289 ~~l~g--l~~~~~r~~~~~~~a~~la~~L~~~g~~V-~p~~~~~~~~~i~~i~l~~ 341 (427)
T 3i16_A 289 SMYQG--LFLAPHISMEALKGAILCSRIMELAGFEV-MPKYDEKRSDIIQSIKFND 341 (427)
T ss_dssp HHHHH--HHHHHHHHHHHHHHHHHHHHHHHHTTCEE-ESCTTSCCSSSCEEEECSS
T ss_pred HHHHH--HHHHHHHHHHHHHHHHHHHHHHHhCCCee-cCCCCCCCccEEEEEEECC
Confidence 33332 34557788999999999999999999865 443444 77777754
No 188
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.84 E-value=2.5e-19 Score=184.33 Aligned_cols=281 Identities=12% Similarity=0.029 Sum_probs=182.6
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhC-----CC-cEEEecCCCc-hHHHHHHHHcCCe----
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVF-----PD-GILYASRESH-YSVFKAARMYRME---- 207 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~-----p~-~~Vl~s~~~H-~S~~~~~~~~G~~---- 207 (476)
+...++++++++++|.+ .+++|+||++|+..++.+++... ++ +.|++.+++| .+...+....|.+
T Consensus 99 ~~~~~l~~~la~~~g~~----~v~~~~ggteA~~~al~~~~~~~~~~~~~g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~ 174 (420)
T 2pb2_A 99 EPALRLGRKLIDATFAE----RVLFMNSGTEANETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSD 174 (420)
T ss_dssp HHHHHHHHHHHHHSSCS----EEEEESSHHHHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCHHHHT
T ss_pred HHHHHHHHHHHhhCCCC----eEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCEEEEEeCCcCCcCHHHHHhcCCccccc
Confidence 66777888899988853 39999999999999999887521 44 4676666654 4445555555653
Q ss_pred --------EEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCcccc----ccCHHHHHHHHHHhCCCCCceEEEEe
Q 011842 208 --------CVKVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGA----VDDLDLVIQTLEESGFTQDRFYIHCD 275 (476)
Q Consensus 208 --------v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~----id~l~~I~~ia~~~g~~~~~~~lhvD 275 (476)
+..+|.+ |+++|+++|+++ +.+|+++.+.++.|. .+++++|.++|++||+ ++++|
T Consensus 175 ~~~p~~~~~~~~~~~-----d~~~le~~i~~~---~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi-----~lI~D 241 (420)
T 2pb2_A 175 GFGPKPADIIHVPFN-----DLHAVKAVMDDH---TCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQA-----LLVFD 241 (420)
T ss_dssp TSSSCCSCEEEECTT-----CHHHHHHHCCTT---EEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTC-----EEEEE
T ss_pred cCCCCCCCeEEecCC-----CHHHHHHHhccC---ceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCC-----EEEEE
Confidence 5666653 899999998753 347777766666665 3689999999999999 99999
Q ss_pred cCcccccccccccCCCCCCcc-cccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHH
Q 011842 276 GALFGLMMPFVKKAPKVSFKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFL 354 (476)
Q Consensus 276 ~a~~g~~~~~~~~~~~~~~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~ 354 (476)
++|.++... ..... ++... ..|+++ ++|++++++++|++++++++++.+.... ...++.+ +.......
T Consensus 242 ev~~g~~~~-g~~~~-~~~~~~~~diit--~sK~l~~G~~iG~~~~~~~l~~~l~~~~-----~~~t~~~--~~~~~aa~ 310 (420)
T 2pb2_A 242 EVQCGMGRT-GDLFA-YMHYGVTPDILT--SAKALGGGFPVSAMLTTQEIASAFHVGS-----HGSTYGG--NPLACAVA 310 (420)
T ss_dssp CTTTTTTTT-SSSSH-HHHHTCCCSEEE--ECGGGGTTSCCEEEEECHHHHTTCC---------CCEECC--CHHHHHHH
T ss_pred cCCcCcccC-CcHHH-HHhcCCCCCeEE--ecccccCCCceEEEEEhHHHHHhhcCCC-----cCcccCc--CHHHHHHH
Confidence 999754321 11100 01111 267775 4699998899999999988765543210 0112221 11222233
Q ss_pred HHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhc----CCeEeecCCeeEEEEecCC-----cHHHh-----hceeec-cc
Q 011842 355 WYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDA----GISAMLNELSSTVVFERPQ-----DEEFV-----RRWQLA-CQ 419 (476)
Q Consensus 355 ~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----g~~~~~~~~~~iv~f~~~~-----~~~~~-----~~~~l~-~~ 419 (476)
.++++.+.. ++..++..+++++|.+.|++. +.....++..+++.+..+. ..++. +++.+. ..
T Consensus 311 ~a~L~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~l~~~l~~~Gi~v~~~~ 387 (420)
T 2pb2_A 311 GAAFDIINT---PEVLQGIHTKRQQFVQHLQAIDEQFDIFSDIRGMGLLIGAELKPKYKGRARDFLYAGAEAGVMVLNAG 387 (420)
T ss_dssp HHHHHHHSS---HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEETTEEEEEECGGGTTCHHHHHHHHHHTTEECEESS
T ss_pred HHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecceEEEEEECCCchHHHHHHHHHHHHCCCEEEeCC
Confidence 344444432 467788888999999998775 3222223334555555432 22232 233333 33
Q ss_pred CCEEEEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 011842 420 GNIAHVVVMPNVTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 420 ~~~lRv~~~~~~T~edid~~~~~l~~~~~~~ 450 (476)
.+.+|++++..+|++||++++++|+++.+++
T Consensus 388 ~~~iRl~~~~~~t~eei~~~~~~l~~~l~~~ 418 (420)
T 2pb2_A 388 ADVMRFAPSLVVEEADIHEGMQRFAQAVGKV 418 (420)
T ss_dssp TTEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 5789999888899999999999999987654
No 189
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.84 E-value=4.9e-19 Score=182.92 Aligned_cols=293 Identities=13% Similarity=0.026 Sum_probs=183.6
Q ss_pred HHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCC-cEEEecCCCchHHHHHHHHcCCe---------
Q 011842 138 RQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPD-GILYASRESHYSVFKAARMYRME--------- 207 (476)
Q Consensus 138 ~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~-~~Vl~s~~~H~S~~~~~~~~G~~--------- 207 (476)
.++..+++++++++++...+ ...++|+||++|+..++.+++...++ .+|+.+...|.+...+..+.|..
T Consensus 85 ~~~~~~l~~~la~~~~~~~~-~~v~~~~ggsea~~~al~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~ 163 (439)
T 3dxv_A 85 NAPAVTLAERLLASFPGEGT-HKIWFGHSGSDANEAAYRAIVKATGRSGVIAFAGAYHGCTVGSMAFSGHSVQADAAKAD 163 (439)
T ss_dssp EHHHHHHHHHHHHTTTCTTT-EEEEEESSHHHHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHCC-------------
T ss_pred CHHHHHHHHHHHHhCCCCCC-CEEEEeCCHHHHHHHHHHHHHHHhCCCEEEEECCCCCCCcHHHHhhcCCCchhhccccC
Confidence 47788899999999865431 25999999999999999987643344 45555555555555555444432
Q ss_pred -----EEEEeCCCCCcc-----CHHHHHHHHH-cCCCCcEEEEEeeCCCccccccC----HHHHHHHHHHhCCCCCceEE
Q 011842 208 -----CVKVDCLISGEI-----DCADFKAKLL-QNKDKPAIINVNIGTTVKGAVDD----LDLVIQTLEESGFTQDRFYI 272 (476)
Q Consensus 208 -----v~~v~~~~~g~~-----D~~~Le~~l~-~~~~~p~~vv~t~gtt~tG~id~----l~~I~~ia~~~g~~~~~~~l 272 (476)
+..+|.+..+.- |+++|+++|. ..+..+.+|+++...+++|.+.| +++|.++|++||+ ++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~-----~l 238 (439)
T 3dxv_A 164 GLILLPYPDPYRPYRNDPTGDAILTLLTEKLAAVPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGI-----LV 238 (439)
T ss_dssp CEEEECCCCSSSCBTTBTTSHHHHHHHHHHHHTSCTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTC-----EE
T ss_pred CCCCCcEEcCCCcccccccHHHHHHHHHHHHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCC-----EE
Confidence 233444322222 7999999994 33344567777777888999988 9999999999999 99
Q ss_pred EEecCcccccccccccCCCCCCcc-cccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhH
Q 011842 273 HCDGALFGLMMPFVKKAPKVSFKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAP 351 (476)
Q Consensus 273 hvD~a~~g~~~~~~~~~~~~~~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~ 351 (476)
++|++|+++.... ... ..+... ..|.++ +.|.+++++++|+++.++++++.+.... + ..++ . .+
T Consensus 239 i~DE~~~g~g~~g-~~~-~~~~~~~~~di~s--~sK~~~~G~riG~~~~~~~~~~~~~~~~-~----~~t~-~-----~~ 303 (439)
T 3dxv_A 239 VCDEVKVGLARSG-RLH-CFEHEGFVPDILV--LGKGLGGGLPLSAVIAPAEILDCASAFA-M----QTLH-G-----NP 303 (439)
T ss_dssp EEECTTTCTTTTS-SSS-GGGGTTCCCSEEE--ECGGGGTTSCCEEEEEEHHHHTSCSSSS-C----CTTT-T-----CH
T ss_pred EEeccccCCCcCc-hhh-HHHhcCCCCCEEE--EcchhcCCcceEEEEECHHHHhhhcCCC-c----CCCc-c-----cH
Confidence 9999998642211 110 011111 257664 4598888889999999988776553221 0 1112 1 23
Q ss_pred HHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhc----CCeEeecCCeeEEEEec--------CCc---HHH-----h
Q 011842 352 IFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDA----GISAMLNELSSTVVFER--------PQD---EEF-----V 411 (476)
Q Consensus 352 l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----g~~~~~~~~~~iv~f~~--------~~~---~~~-----~ 411 (476)
+.+.+++..+....-++.+++..++.+++++.|++. +.....++..+++.+.. +.. ..+ .
T Consensus 304 ~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 383 (439)
T 3dxv_A 304 ISAAAGLAVLETIDRDDLPAMAERKGRLLRDGLSELAKRHPLIGDIRGRGLACGMELVCDRQSREPARAETAKLIYRAYQ 383 (439)
T ss_dssp HHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEEEEETTTTEECHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEEEEEEEEEecCccccCCCHHHHHHHHHHHHH
Confidence 444444443321111445666777777777777663 43333333344444433 221 112 1
Q ss_pred hceeec-cc--CCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 011842 412 RRWQLA-CQ--GNIAHVVVMPNVTIDKLDDFLNELIENRSTWY 451 (476)
Q Consensus 412 ~~~~l~-~~--~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~ 451 (476)
++..+. .. ++.+|++++..+|+++|++++++|+++.+++.
T Consensus 384 ~Gv~v~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 426 (439)
T 3dxv_A 384 LGLVVYYVGMNGNVLEFTPPLTITETDIHKALDLLDRAFSELS 426 (439)
T ss_dssp HTEECEEESTTSCEEEECCCTTCCHHHHHHHHHHHHHHHHTGG
T ss_pred CCcEEeecCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 233332 22 37899999999999999999999999887654
No 190
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.84 E-value=1.9e-19 Score=179.18 Aligned_cols=262 Identities=11% Similarity=0.049 Sum_probs=186.3
Q ss_pred HHHHHHHHHHHHHHcC---CCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCC
Q 011842 138 RQFEVGVLDWFARLWE---LENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCL 214 (476)
Q Consensus 138 ~~le~~~~~~la~l~g---~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~ 214 (476)
.++++++ +++++ +++ ..+++|+|+++++..++.++ |+.|+++ ++|.++...++..|++++.+|++
T Consensus 59 ~~lr~~l----a~~~~~~~~~~--~~v~~~~G~~~al~~~~~~~-----gd~Vl~~-p~y~~~~~~~~~~g~~~~~v~~~ 126 (335)
T 1uu1_A 59 EELIEKI----LSYLDTDFLSK--NNVSVGNGADEIIYVMMLMF-----DRSVFFP-PTYSCYRIFAKAVGAKFLEVPLT 126 (335)
T ss_dssp HHHHHHH----HHHHTCSSCCG--GGEEEESSHHHHHHHHHHHS-----SEEEECS-SSCHHHHHHHHHHTCEEEECCCC
T ss_pred HHHHHHH----HHHcCCCCCCH--HHEEEcCChHHHHHHHHHHh-----CCcEEEC-CCcHHHHHHHHHcCCeEEEeccC
Confidence 3555554 44555 543 35999999999999888765 7899999 99999999999999999999998
Q ss_pred CCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCC
Q 011842 215 ISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSF 294 (476)
Q Consensus 215 ~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~ 294 (476)
+++.+|+++| ++ +.+|++++++|++|.+.|.++|.++++.+| ++++|++|+.+... +.+..
T Consensus 127 ~~~~~d~~~l-----~~---~~~v~l~~p~nptG~~~~~~~l~~l~~~~~------~li~De~~~~~~~~-----~~~~~ 187 (335)
T 1uu1_A 127 KDLRIPEVNV-----GE---GDVVFIPNPNNPTGHVFEREEIERILKTGA------FVALDEAYYEFHGE-----SYVDF 187 (335)
T ss_dssp TTSCCCCCCC-----CT---TEEEEEESSCTTTCCCCCHHHHHHHHHTTC------EEEEECTTHHHHCC-----CCGGG
T ss_pred CCCCCCHHHc-----CC---CCEEEEeCCCCCCCCCCCHHHHHHHHHhCC------EEEEECcchhhcch-----hHHHH
Confidence 7778888877 23 347777899999999999999999999873 79999999854321 11111
Q ss_pred -c-ccccEEEEcCCCCCC-CCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhCh-hcHHHHH
Q 011842 295 -K-KPIGSVSVSGHKFVG-CPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGY-KGFQKEV 370 (476)
Q Consensus 295 -~-~~~Dsi~~s~hK~l~-~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~-~g~~~~~ 370 (476)
. ...+++..+++|+++ .++++|++++++++++.+...... .+. ..+.++++...+.. +.+++..
T Consensus 188 ~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~~~~---------~~~---~~~~~~~~~~~l~~~~~~~~~~ 255 (335)
T 1uu1_A 188 LKKYENLAVIRTFSKAFSLAAQRVGYVVASEKFIDAYNRVRLP---------FNV---SYVSQMFAKVALDHREIFEERT 255 (335)
T ss_dssp GGTCSSEEEEEESTTTTTCGGGCCEEEEECHHHHHHHHHHSCT---------TCS---CHHHHHHHHHHHHTHHHHHHHH
T ss_pred hhhCCCEEEEecchhhcCCcccCeEEEEeCHHHHHHHHHhcCC---------CCc---CHHHHHHHHHHhCCHHHHHHHH
Confidence 1 125688899999997 667899999988776655321110 122 23444444444322 3567788
Q ss_pred HHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecCC--cHHHh-----hceeecccCCEEEEEEcCCCCHHHHHHHHHHH
Q 011842 371 QKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERPQ--DEEFV-----RRWQLACQGNIAHVVVMPNVTIDKLDDFLNEL 443 (476)
Q Consensus 371 ~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~--~~~~~-----~~~~l~~~~~~lRv~~~~~~T~edid~~~~~l 443 (476)
++..++++++.+.|++.|+. +.++.++++.+..+. ..++. +++.+....+.+|+++. +.+|+++++++|
T Consensus 256 ~~~~~~~~~l~~~L~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~iRis~~---~~~~i~~~~~~l 331 (335)
T 1uu1_A 256 KFIVEERERMKSALREMGYR-ITDSRGNFVFVFMEKEEKERLLEHLRTKNVAVRSFREGVRITIG---KREENDMILREL 331 (335)
T ss_dssp HHHHHHHHHHHHHHHHHTCC-BCCCCSSEEEEECCTHHHHHHHHHHHHHTEEEEEETTEEEEECC---CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCcE-EcCCCCeEEEEECCCCCHHHHHHHHHHCCEEEEECCCeEEEEeC---CHHHHHHHHHHH
Confidence 88899999999999988764 345556677777664 22232 23334334578999874 478899999998
Q ss_pred HHH
Q 011842 444 IEN 446 (476)
Q Consensus 444 ~~~ 446 (476)
+++
T Consensus 332 ~~~ 334 (335)
T 1uu1_A 332 EVF 334 (335)
T ss_dssp HCC
T ss_pred Hhh
Confidence 753
No 191
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.84 E-value=1.5e-19 Score=188.33 Aligned_cols=267 Identities=12% Similarity=0.080 Sum_probs=183.8
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHH----HHHcCCeEEEEeCC
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKA----ARMYRMECVKVDCL 214 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~----~~~~G~~v~~v~~~ 214 (476)
...+++++++++++|.+ ..+++++|++|+..++. .. .||+.|+++++.|.++... ++..|++++.++.+
T Consensus 133 ~~~~~l~~~la~~~g~~----~~i~~~sGt~al~~~l~-~~--~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~ 205 (464)
T 1ibj_A 133 PTRDALESLLAKLDKAD----RAFCFTSGMAALSAVTH-LI--KNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTT 205 (464)
T ss_dssp HHHHHHHHHHHHHHTCS----EEEEESSHHHHHHHHHT-TS--CTTCEEEEESSCCHHHHHHHHHTSGGGTCEEEEECTT
T ss_pred HHHHHHHHHHHHHhCCC----eEEEECCHHHHHHHHHH-Hh--CCCCEEEEECCCchhHHHHHHHHHHHcCCEEEEeCCC
Confidence 47888999999999975 27888899998876654 32 4899999999999988754 56679999999875
Q ss_pred CCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCC
Q 011842 215 ISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSF 294 (476)
Q Consensus 215 ~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~ 294 (476)
|+++|+++|.+++ .+|++++++|++|.+.|+++|+++|++||+ ++++|++|+.+... . .++
T Consensus 206 -----d~~~l~~~i~~~t---k~v~l~~p~NptG~v~~l~~i~~la~~~gi-----~livDea~~~g~~~--~---~~~- 266 (464)
T 1ibj_A 206 -----KLDEVAAAIGPQT---KLVWLESPTNPRQQISDIRKISEMAHAQGA-----LVLVDNSIMSPVLS--R---PLE- 266 (464)
T ss_dssp -----SHHHHHHHCCSSE---EEEEECSSCTTTCCCCCHHHHHHHHHTTTC-----EEEEECTTTCTTTC--C---GGG-
T ss_pred -----CHHHHHHHhccCc---eEEEEeCCCCCCCEeecHHHHHHHHHHcCC-----EEEEECCCcccccC--C---hhh-
Confidence 8999999987544 488899999999999999999999999999 99999999754321 0 012
Q ss_pred cccccEEEEcCCCCCCCCC--CceeEEeeh-hhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHH
Q 011842 295 KKPIGSVSVSGHKFVGCPM--PCGVQITRM-EHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQ 371 (476)
Q Consensus 295 ~~~~Dsi~~s~hK~l~~p~--~~G~l~~~~-~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~ 371 (476)
..+|+++.++||++++|. ++|++++++ ++.+.+.....+.. ++ ...+.+|+++..+ +.+..+++
T Consensus 267 -~~~div~~S~sK~~~g~~Gl~~G~l~~~~~~l~~~l~~~~~~~g-------~~---~~~~~~~a~~~al--~~~~~r~~ 333 (464)
T 1ibj_A 267 -LGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEG-------SG---LAPFDCWLCLRGI--KTMALRIE 333 (464)
T ss_dssp -TTCSEEEEETTTTTTCSSCCCCEEEEECSHHHHHHHHHHHHHTT-------CB---CCHHHHHHHHHHH--TTHHHHHH
T ss_pred -cCCEEEEECCcccccCCCCCcEEEEEEChHHHHHHHHHHHHhcC-------CC---CCHHHHHHHHhch--hhHHHHHH
Confidence 237999999999998765 459999986 55555432111111 11 1245666666554 33444455
Q ss_pred HHHHHHHHHHHHHHhcC--------------CeEeecC----CeeEEEEecCCc---HHHhhcee-----ecc-------
Q 011842 372 KCLRNAHYLKDRLLDAG--------------ISAMLNE----LSSTVVFERPQD---EEFVRRWQ-----LAC------- 418 (476)
Q Consensus 372 ~~~~~a~~l~~~L~~~g--------------~~~~~~~----~~~iv~f~~~~~---~~~~~~~~-----l~~------- 418 (476)
+..+++..+.+.|++.+ ...+..+ ..+++.|..++. ..+.+.+. +..
T Consensus 334 ~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~L~~~gi~v~~G~~~sl~ 413 (464)
T 1ibj_A 334 KQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITGSVALSKHLVETTKYFSIAVSFGSVKSLI 413 (464)
T ss_dssp HHHHHHHHHHHHHHTCTTCCEEECTTSTTSTTHHHHTTTCSCCCSEEEEECSCHHHHHHHHHHCSSSEECSCCCSSSCEE
T ss_pred HHHHHHHHHHHHHHhCCCceEEECCCCCCCcchHHHhccCCCCceEEEEEECCHHHHHHHHHhcCcceEeecCCCCceee
Confidence 55555555566665542 1111122 145788877532 12333221 100
Q ss_pred ---------------------cCCEEEEEEcCCCCHHHHHHHHHHHHHHHH
Q 011842 419 ---------------------QGNIAHVVVMPNVTIDKLDDFLNELIENRS 448 (476)
Q Consensus 419 ---------------------~~~~lRv~~~~~~T~edid~~~~~l~~~~~ 448 (476)
..+.+|+++.. ||+++++++|+++.+
T Consensus 414 ~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvg~----edi~~li~~L~~al~ 460 (464)
T 1ibj_A 414 SMPCFMSHASIPAEVREARGLTEDLVRISAGI----EDVDDLISDLDIAFK 460 (464)
T ss_dssp ECTTTTTTCSCCSSSSSSSSCCTTCEEEECCS----SCHHHHHHHHHHHHH
T ss_pred ecccccccccCCHHHHHhcCCCcCeEEEEeCC----CCHHHHHHHHHHHHh
Confidence 02578988875 899999999988764
No 192
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.83 E-value=1.3e-19 Score=188.62 Aligned_cols=289 Identities=12% Similarity=0.112 Sum_probs=174.0
Q ss_pred HHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCC-----C----cEEEecCCCchH-HHHHHHHcCCeEEEE-
Q 011842 143 GVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFP-----D----GILYASRESHYS-VFKAARMYRMECVKV- 211 (476)
Q Consensus 143 ~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p-----~----~~Vl~s~~~H~S-~~~~~~~~G~~v~~v- 211 (476)
++++++++++|.+ .+++|+|||+||..++.+++. + | +.|+++ ..|+. +.......|+.++..
T Consensus 78 ~l~~~la~~~~~~----~v~~t~~gt~A~~~al~~~~~--~~~~~~G~~~~d~Ii~~-~~h~~t~~~~~~~~~~~~~~~~ 150 (467)
T 2oqx_A 78 ALAESVKNIFGYQ----YTIPTHQGRGAEQIYIPVLIK--KREQEKGLDRSKMVAFS-NYFFDTTQGHSQINGCTVRNVY 150 (467)
T ss_dssp HHHHHHHHHHCCS----EEEEEC--CCSHHHHHHHHHH--HHHHHHCCCTTTCEEEE-SSCCHHHHHHHHHTTCEEEECB
T ss_pred HHHHHHHHHhCcC----cEEEcCCcHHHHHHHHHHHhc--cccccCCCCccceEEec-ccccccchhhhhccCcceeecc
Confidence 4455677777764 399999999999999999876 4 5 777776 56744 344445566665443
Q ss_pred -----eCC----CCCccCHHHHHHHHHcCC-CCcEEEEEeeCCCcc-ccc---cCHHHHHHHHHHhCCCCCceEEEEecC
Q 011842 212 -----DCL----ISGEIDCADFKAKLLQNK-DKPAIINVNIGTTVK-GAV---DDLDLVIQTLEESGFTQDRFYIHCDGA 277 (476)
Q Consensus 212 -----~~~----~~g~~D~~~Le~~l~~~~-~~p~~vv~t~gtt~t-G~i---d~l~~I~~ia~~~g~~~~~~~lhvD~a 277 (476)
+.+ .++.+|+++|+++|++.. .++.+|+++.+++++ |.+ +++++|+++|++||+ |+|+|++
T Consensus 151 ~~~~~~~~~~~~~~~~~d~~~Le~~i~~~~~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~~gi-----~li~D~a 225 (467)
T 2oqx_A 151 IKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDI-----PVVMDSA 225 (467)
T ss_dssp CTTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTC-----CEEEECT
T ss_pred ccccccCCCCCCccCCcCHHHHHHHHHhcCCCceeEEEEeccccCCCCccCCHHHHHHHHHHHHHcCC-----EEEEEch
Confidence 222 346799999999998521 123378788888887 665 568999999999999 9999988
Q ss_pred ccc-cccc------ccccCCCCCCc----ccccEEEEcCCCCCCCCCCceeEEeehh-hhhhhcCCcccc--CCCCCccc
Q 011842 278 LFG-LMMP------FVKKAPKVSFK----KPIGSVSVSGHKFVGCPMPCGVQITRME-HINVLSSNVEYL--ASRDATIM 343 (476)
Q Consensus 278 ~~g-~~~~------~~~~~~~~~~~----~~~Dsi~~s~hK~l~~p~~~G~l~~~~~-~~~~l~~~~~yl--~~~~~~~~ 343 (476)
|+. ..+. ...+.....+. ..+|++++++||+++.|.+ |+++.+++ +++.+.....+. ... ....
T Consensus 226 ~~~e~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~s~sK~~g~~~G-g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 303 (467)
T 2oqx_A 226 RFAENAYFIKQREAEYKDWTIEQITRETYKYADMLAMSAKKDAMVPMG-GLLCMKDDSFFDVYTECRTLCVVQEG-FPTY 303 (467)
T ss_dssp THHHHHHHHHHHCGGGTTSCHHHHHHHHGGGCSEEEEESSSTTCCSSC-EEEEECSGGGHHHHHHHHHHHHHTTS-SCCC
T ss_pred hhhhhhhhcccccccccCccHHHHhhhhhccCCeEEEecccccCCCCc-eEEEecChhHHHHHHHHHHhhhccCC-cccc
Confidence 755 2210 00011001111 2378889999999987644 67777766 332221111111 110 0001
Q ss_pred CCCCChhHHHHHHHHHHhChhcH-HHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecC------CcHHH-----h
Q 011842 344 GSRNGHAPIFLWYTLNRKGYKGF-QKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERP------QDEEF-----V 411 (476)
Q Consensus 344 ~sr~~~~~l~~~~~l~~~g~~g~-~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~------~~~~~-----~ 411 (476)
++.. . ..+. ++...-.+.+ ++.+++..++++++.+.|++.++... +....++.+..+ +..++ .
T Consensus 304 ~~~~-~--~~~~-al~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 378 (467)
T 2oqx_A 304 GGLE-G--GAME-RLAVGLYDGMNLDWLAYRIAQVQYLVDGLEEIGVVCQ-QAGGHAAFVDAGKLLPHIPADQFPAQALA 378 (467)
T ss_dssp CCCC-H--HHHH-HHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTTCCEE-EECSSCEEEEHHHHSTTSCGGGCHHHHHH
T ss_pred cchh-h--hHHH-HHHHhhHhhhhHHHHHHHHHHHHHHHHHHHHCCCeee-cCCceEEEEechhhcccCCcccccHHHHH
Confidence 1221 1 1111 1211001111 23455667888999999988876555 545566666542 11111 2
Q ss_pred h------ceeecc-c-----------------CCEEEEEEcCC-CCHHHHHHHHHHHHHHHHHH
Q 011842 412 R------RWQLAC-Q-----------------GNIAHVVVMPN-VTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 412 ~------~~~l~~-~-----------------~~~lRv~~~~~-~T~edid~~~~~l~~~~~~~ 450 (476)
+ +..+.. . .+.+|+++... +|+++|+++++.|+++.++.
T Consensus 379 ~~L~~~~gv~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~~t~e~i~~~~~~l~~~l~~~ 442 (467)
T 2oqx_A 379 CELYKVAGIRAVEIGSFLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKENA 442 (467)
T ss_dssp HHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEECCCTTTSCHHHHHHHHHHHHHHHHSG
T ss_pred HHHHHhcCceecccccccccccccccccccCccCeEEEEecCCCCCHHHHHHHHHHHHHHHhhh
Confidence 2 222211 1 16899998888 99999999999999987653
No 193
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.83 E-value=2.1e-18 Score=178.98 Aligned_cols=291 Identities=10% Similarity=0.034 Sum_probs=180.1
Q ss_pred HHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhh---C---CCcEEEecCCCchHHHHHHHHcCC-----
Q 011842 138 RQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREV---F---PDGILYASRESHYSVFKAARMYRM----- 206 (476)
Q Consensus 138 ~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~---~---p~~~Vl~s~~~H~S~~~~~~~~G~----- 206 (476)
.+...+++++++++++.+.+ ++||+|||+||..++.+++.. . +++.|++.+++|......+..++.
T Consensus 90 ~~~~~~la~~l~~~~~~~~~---v~~~~ggseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~ 166 (452)
T 3n5m_A 90 HEPAIKLAEKLNEWLGGEYV---IFFSNSGSEANETAFKIARQYYAQKGEPHRYKFMSRYRGYHGNTMATMAATGQAQRR 166 (452)
T ss_dssp EHHHHHHHHHHHHHHTSCEE---EEEESSHHHHHHHHHHHHHHHHHTTTCTTCCEEEEETTCCCCSSHHHHHSCCCGGGT
T ss_pred CHHHHHHHHHHHHhCCCCce---EEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHHhcCCchhhc
Confidence 37778889999999886532 899999999999999998843 3 567777777776544333333321
Q ss_pred --------eEEEEeCCCCC------------ccCHHHHHHHHH-cCCCCcEEEEEeeC-CCccccccC----HHHHHHHH
Q 011842 207 --------ECVKVDCLISG------------EIDCADFKAKLL-QNKDKPAIINVNIG-TTVKGAVDD----LDLVIQTL 260 (476)
Q Consensus 207 --------~v~~v~~~~~g------------~~D~~~Le~~l~-~~~~~p~~vv~t~g-tt~tG~id~----l~~I~~ia 260 (476)
.+..++..... ..++++|+++|+ ....++.+|+++.. .+ +|.+.| +++|.++|
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~ 245 (452)
T 3n5m_A 167 YQYEPFASGFLHVTPPDCYRMPGIERENIYDVECVKEVDRVMTWELSETIAAFIMEPIITG-GGILMAPQDYMKAVHETC 245 (452)
T ss_dssp TTTCCCCSCEEEECCCCTTTSTTTTTSCGGGCHHHHHHHHHHHHHCGGGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHH
T ss_pred cccCCCCCCCeEeCCCccccCccCCchhhHHHHHHHHHHHHHHhcCCCCEEEEEEccccCC-CCeeeCCHHHHHHHHHHH
Confidence 23444432111 112899999997 32233456777666 68 998876 99999999
Q ss_pred HHhCCCCCceEEEEecCcccccccccccCCCCCCcc-cccEEEEcCCCCCCCC-CCceeEEeehhhhhhhcC---Ccccc
Q 011842 261 EESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKK-PIGSVSVSGHKFVGCP-MPCGVQITRMEHINVLSS---NVEYL 335 (476)
Q Consensus 261 ~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~-~~Dsi~~s~hK~l~~p-~~~G~l~~~~~~~~~l~~---~~~yl 335 (476)
++||+ ++++|++|.++........ .+... ..|+++++ |.++.+ +++|++++++++++.+.. ...++
T Consensus 246 ~~~~~-----llI~DEv~~g~g~~g~~~~--~~~~~~~~di~t~s--K~l~~G~~~ig~~~~~~~i~~~~~~~~~~~~~~ 316 (452)
T 3n5m_A 246 QKHGA-----LLISDEVICGFGRTGKAFG--FMNYDVKPDIITMA--KGITSAYLPLSATAVKREIYEAFKGKGEYEFFR 316 (452)
T ss_dssp HHHTC-----EEEEECTTTTTTTTSSSSG--GGGTTCCCSEEEEC--GGGGTTSSCCEEEEEEHHHHGGGCSSSTTCSCC
T ss_pred HHcCC-----EEEEecchhCCCcccccch--hhhcCCCCCEEeec--ccccCCCcceEEEEECHHHHHHHhhccCCCCcc
Confidence 99999 9999999986532211000 11111 26777654 888878 999999999988777643 11121
Q ss_pred CCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhc----CCeEeecCCeeEEEEec---CC--
Q 011842 336 ASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDA----GISAMLNELSSTVVFER---PQ-- 406 (476)
Q Consensus 336 ~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----g~~~~~~~~~~iv~f~~---~~-- 406 (476)
.. .++ ...++.+.+++..+..-.-++.+++..++.+++++.|++. +......+...++.+.. ..
T Consensus 317 ~~--~t~-----~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~ 389 (452)
T 3n5m_A 317 HI--NTF-----GGNPAACALALKNLEIIENENLIERSAQMGSLLLEQLKEEIGEHPLVGDIRGKGLLVGIELVNDKETK 389 (452)
T ss_dssp CC--CSS-----TTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEESSSCEEEEEEEETTTT
T ss_pred cc--CCC-----CCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEEEEEEEEEEecCCccc
Confidence 11 111 1224555555444421111345666677777777777653 33322222222333322 11
Q ss_pred ----c---HHH-----hhceeec-cc------CCEEEEEEcCCCCHHHHHHHHHHHHHHHH
Q 011842 407 ----D---EEF-----VRRWQLA-CQ------GNIAHVVVMPNVTIDKLDDFLNELIENRS 448 (476)
Q Consensus 407 ----~---~~~-----~~~~~l~-~~------~~~lRv~~~~~~T~edid~~~~~l~~~~~ 448 (476)
. ..+ .++..+. .. .+.+|++++..+|+++|++++++|+++.+
T Consensus 390 ~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~ 450 (452)
T 3n5m_A 390 EPIDNDKIASVVNACKEKGLIIGRNGMTTAGYNNILTLAPPLVISSEEIAFVIGTLKTAME 450 (452)
T ss_dssp EECCHHHHHHHHHHHHHTTEECEECTTSSTTCCCEEEECCCTTCCHHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHCCcEEeecCcccCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 0 112 1233332 22 47899998899999999999999988764
No 194
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.83 E-value=5.4e-19 Score=181.98 Aligned_cols=223 Identities=15% Similarity=0.088 Sum_probs=156.8
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHH----HHcCCeEEEE-eC
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAA----RMYRMECVKV-DC 213 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~----~~~G~~v~~v-~~ 213 (476)
....++++.+++++|.+. .+++++||+|+..++.++.. +++.|+++..+|.+....+ +..|++++.+ +.
T Consensus 58 ~~~~~l~~~la~~~g~~~----~v~~~sGt~A~~~~l~~~~~--~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 131 (421)
T 2ctz_A 58 PTVDVLEKRLAALEGGKA----ALATASGHAAQFLALTTLAQ--AGDNIVSTPNLYGGTFNQFKVTLKRLGIEVRFTSRE 131 (421)
T ss_dssp HHHHHHHHHHHHHHTCSE----EEEESSHHHHHHHHHHHHCC--TTCEEEECSCCCHHHHHHHHTHHHHTTCEEEECCTT
T ss_pred hHHHHHHHHHHHHhCCCc----eEEecCHHHHHHHHHHHHhC--CCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECCC
Confidence 344566677888888762 56677789999999887754 8999999999999987765 7789999999 76
Q ss_pred CCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCc-ccccccccccCCCC
Q 011842 214 LISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGAL-FGLMMPFVKKAPKV 292 (476)
Q Consensus 214 ~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~-~g~~~~~~~~~~~~ 292 (476)
+ |+++|+++|++++ .+|++++++|++|.+.|+++|+++|++||+ ++++|++| +.+.. . .. +
T Consensus 132 ~-----d~~~l~~~i~~~~---~~v~~~~~~n~~G~~~~l~~i~~~a~~~g~-----~livD~~~~~~g~~-~-~~---~ 193 (421)
T 2ctz_A 132 E-----RPEEFLALTDEKT---RAWWVESIGNPALNIPDLEALAQAAREKGV-----ALIVDNTFGMGGYL-L-RP---L 193 (421)
T ss_dssp C-----CHHHHHHHCCTTE---EEEEEESSCTTTCCCCCHHHHHHHHHHHTC-----EEEEECGGGGGGTS-C-CG---G
T ss_pred C-----CHHHHHHhhccCC---eEEEEECCCCCCCcccCHHHHHHHHHHcCC-----EEEEECCccccccc-C-Cc---c
Confidence 5 8999999997654 488889999999999999999999999999 99999999 64421 1 11 1
Q ss_pred CCcccccEEEEcCCCCCCCCC-CceeEEeeh-h--h----hhhhcC-CccccCCCC-----------------CcccCCC
Q 011842 293 SFKKPIGSVSVSGHKFVGCPM-PCGVQITRM-E--H----INVLSS-NVEYLASRD-----------------ATIMGSR 346 (476)
Q Consensus 293 ~~~~~~Dsi~~s~hK~l~~p~-~~G~l~~~~-~--~----~~~l~~-~~~yl~~~~-----------------~~~~~sr 346 (476)
...+|+++.|+||+++.|. ++|++++++ + + .+.+.. ...|..... ....+.+
T Consensus 194 --~~~~Di~~~s~~K~l~~~g~~~G~~~~~~~~~~~~~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~r~~~~~~~g~~ 271 (421)
T 2ctz_A 194 --AWGAALVTHSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQPGYHGLRLTEAFGELAFIVKARVDGLRDQGQA 271 (421)
T ss_dssp --GGTCSEEEEETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCBGGGTTBCHHHHHGGGHHHHHHHHTHHHHHCCC
T ss_pred --ccCCeEEEECCcccccCCCCcEEEEEEeccchhhcccchhhhccccchhhhhhhhhhcchhHHHHHHHHHHHHhcCCC
Confidence 1238999999999999755 578777752 1 2 122211 011100000 0001111
Q ss_pred CChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCCeE
Q 011842 347 NGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISA 391 (476)
Q Consensus 347 ~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~ 391 (476)
..++..|..+.. .+.+..++++..++++++.+.|++.+...
T Consensus 272 --~~~~~a~~~~~~--l~~l~~r~~~~~~~a~~l~~~L~~~p~v~ 312 (421)
T 2ctz_A 272 --LGPFEAWVVLLG--METLSLRAERHVENTLHLAHWLLEQPQVA 312 (421)
T ss_dssp --CCHHHHHHHHHH--HTTHHHHHHHHHHHHHHHHHHHHTCTTEE
T ss_pred --CCHHHHHHHHcC--cchHHHHHHHHHHhHHHHHHHHHhCCCee
Confidence 224455554443 35566778888899999999999975433
No 195
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.83 E-value=2e-18 Score=178.29 Aligned_cols=282 Identities=12% Similarity=0.022 Sum_probs=175.1
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhh-------CCC-cEEEecCCCch-HHHHHHHHcC----
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREV-------FPD-GILYASRESHY-SVFKAARMYR---- 205 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~-------~p~-~~Vl~s~~~H~-S~~~~~~~~G---- 205 (476)
+...++.+.+++++|.+ .+++|+|||+||..++.+++.. .++ +.|++.+++|. +...++.+.|
T Consensus 107 ~~~~~l~~~la~~~g~~----~v~~~~sGseA~~~al~~a~~~~~~~~g~~~gr~~vi~~~~~yhg~~~~~~~~~g~~~~ 182 (433)
T 1z7d_A 107 VPLGICERYLTNLLGYD----KVLMMNTGAEANETAYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKC 182 (433)
T ss_dssp HHHHHHHHHHHHHHTCS----EEEEESSHHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTC-----------------
T ss_pred HHHHHHHHHHHhhcCCC----eEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEeCCcCCcchhhhcccCCccc
Confidence 55666777788888753 3899999999999999988742 245 77777776654 4444444444
Q ss_pred --------CeEEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCcccccc----CHHHHHHHHHHhCCCCCceEEE
Q 011842 206 --------MECVKVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVD----DLDLVIQTLEESGFTQDRFYIH 273 (476)
Q Consensus 206 --------~~v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id----~l~~I~~ia~~~g~~~~~~~lh 273 (476)
.+++.+|.+ |+++|+++|+. .++.+|+++...+++|.+. ++++|.++|++||+ +++
T Consensus 183 ~~~~~p~~~~v~~~~~~-----d~~~le~~l~~--~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~-----llI 250 (433)
T 1z7d_A 183 TSNFGPFAPQFSKVPYD-----DLEALEEELKD--PNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNV-----LFV 250 (433)
T ss_dssp ---------CEEEECTT-----CHHHHHHHHTS--TTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTC-----EEE
T ss_pred cccCCCCCCCeEEeCCC-----CHHHHHHHhCC--CCEEEEEEECCCCCCCccCCCHHHHHHHHHHHHHcCC-----EEE
Confidence 345666654 89999999952 2344666665566788765 79999999999999 999
Q ss_pred EecCcccccccccccCCCCCCcc-cccEEEEcCCCCCCCC-CCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhH
Q 011842 274 CDGALFGLMMPFVKKAPKVSFKK-PIGSVSVSGHKFVGCP-MPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAP 351 (476)
Q Consensus 274 vD~a~~g~~~~~~~~~~~~~~~~-~~Dsi~~s~hK~l~~p-~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~ 351 (476)
+|++|.++... .... .++... ..|+++ +.|+++++ +++|++++++++++.+.... ...++.+ +....
T Consensus 251 ~DEv~~g~g~~-g~~~-~~~~~~~~~di~t--~sK~l~~G~~~~G~v~~~~~~~~~l~~~~-----~~~t~~~--~~~~~ 319 (433)
T 1z7d_A 251 ADEVQTGLGRT-GKLL-CVHHYNVKPDVIL--LGKALSGGHYPISAVLANDDIMLVIKPGE-----HGSTYGG--NPLAA 319 (433)
T ss_dssp EECTTTTTTTT-SSSS-GGGGGTCCCSEEE--ECGGGGTTSSCCEEEEECHHHHTTCCTTC-----CCCTTTT--CHHHH
T ss_pred EecCccCCCcC-Ccch-hhHhcCCCCCEEE--ECccccCCCCCeEEEEECHHHHhhhcccc-----ccccCCC--CHHHH
Confidence 99999763221 1110 011111 267774 45999987 78999999988766553210 0112211 11122
Q ss_pred HHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhc--CCe--EeecCCeeEEEEecCC----cHHHh-----hceeec-
Q 011842 352 IFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDA--GIS--AMLNELSSTVVFERPQ----DEEFV-----RRWQLA- 417 (476)
Q Consensus 352 l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~--g~~--~~~~~~~~iv~f~~~~----~~~~~-----~~~~l~- 417 (476)
....++++.+.. ++..++..++++++.+.|++. ++. ...++..+++.+..+. ...+. +++.+.
T Consensus 320 aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~l~~~Gv~v~~ 396 (433)
T 1z7d_A 320 SICVEALNVLIN---EKLCENAEKLGGPFLENLKRELKDSKIVRDVRGKGLLCAIEFKNELVNVLDICLKLKENGLITRD 396 (433)
T ss_dssp HHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEETTEEEEEECTTTCCHHHHHHHHHHTTEECCE
T ss_pred HHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeeeeEEEEEEccChhHHHHHHHHHHHCCeEEec
Confidence 223334443322 246677788889999998875 432 1222334555555442 22232 233333
Q ss_pred ccCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 011842 418 CQGNIAHVVVMPNVTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 418 ~~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~ 450 (476)
...+.+|++++..+|++||++++++|+++.+++
T Consensus 397 ~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~ 429 (433)
T 1z7d_A 397 VHDKTIRLTPPLCITKEQLDECTEIIVKTVKFF 429 (433)
T ss_dssp ETTTEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCcCCCHHHHHHHHHHHHHHHHHH
Confidence 346789999888899999999999999987664
No 196
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.83 E-value=3.5e-19 Score=178.50 Aligned_cols=279 Identities=11% Similarity=0.073 Sum_probs=177.6
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCc--EEEecCCCchHHHH---HHHHcCCeEEEEeC
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDG--ILYASRESHYSVFK---AARMYRMECVKVDC 213 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~--~Vl~s~~~H~S~~~---~~~~~G~~v~~v~~ 213 (476)
....++++++++++|.+. .++++|||+|+..++.++.. +++ +|+++...|++... .+...|++++.++.
T Consensus 48 ~~~~~l~~~la~~~~~~~----~i~~~~g~~a~~~a~~~~~~--~g~~~vvi~~~~~~~~~~~~~~~~~~~g~~~~~v~~ 121 (359)
T 3pj0_A 48 AVIEDFETKIAKILGKQS----AVFFPSGTMAQQIALRIWAD--RKENRRVAYHPLSHLEIHEQDGLKELQQITPLLLGT 121 (359)
T ss_dssp HHHHHHHHHHHHHHTCSE----EEEESCHHHHHHHHHHHHHH--HHTCCEEEECTTCHHHHSSTTHHHHHHCCEEEECSC
T ss_pred HHHHHHHHHHHHHhCCCc----EEEeCCHHHHHHHHHHHHHh--cCCCcEEEEeccceeeehhcchHHHhcCceEEecCC
Confidence 455567778888888864 47778999999999988876 444 47788888876642 23567999999987
Q ss_pred CCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCcc-ccccCHH---HHHHHHHHhCCCCCceEEEEecCcccccccccccC
Q 011842 214 LISGEIDCADFKAKLLQNKDKPAIINVNIGTTVK-GAVDDLD---LVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKA 289 (476)
Q Consensus 214 ~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~t-G~id~l~---~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~ 289 (476)
+++.+|+++|+++ .+++ .+|+++++++++ |.+.|++ +|+++|++||+ |+|+|++|..+..... ..
T Consensus 122 -~~~~~d~~~l~~~-~~~~---~~v~~~~p~n~~~G~~~~~~~l~~l~~~~~~~~~-----~li~D~a~~~~~~~~~-~~ 190 (359)
T 3pj0_A 122 -ANQLLTIDDIKSL-REPV---SSVLIELPQREIGGQLPAFEELEKISEYCHEQGI-----SLHLDGARLWEITPFY-QK 190 (359)
T ss_dssp -TTSCCCHHHHHTC-SSCC---SEEEEESSBGGGTSBCCCHHHHHHHHHHHHHHTC-----EEEEEETTCGGGHHHH-TC
T ss_pred -cCCCcCHHHHHhc-cCCc---eEEEEEecccCCCcccCCHHHHHHHHHHHHHcCC-----EEEEECcchhcchhhh-CC
Confidence 4689999999988 4333 488888887777 6876654 55999999999 9999999864332111 00
Q ss_pred CCCCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCC-hhHHHHHHHHHHhChhcHHH
Q 011842 290 PKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNG-HAPIFLWYTLNRKGYKGFQK 368 (476)
Q Consensus 290 ~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~-~~~l~~~~~l~~~g~~g~~~ 368 (476)
....+...+|+++.++||+++.|.+ |+++.++++++.+......... ..... ..+.....++... .+
T Consensus 191 ~~~~~~~~~d~~~~s~sK~~~~~~g-g~~~~~~~l~~~~~~~~~~~~~------~~~~~~~~~~a~~~~l~~~-----~~ 258 (359)
T 3pj0_A 191 SAEEICALFDSVYVSFYKGIGGIAG-AILAGNDDFVQEAKIWKRRYGG------DLISLYPYILSADYYFEKR-----IG 258 (359)
T ss_dssp CHHHHHTTCSEEEEESSSTTCCSSC-EEEEECHHHHHHHHHHHHHTTC------CCSCCHHHHHHHHHHHHHH-----GG
T ss_pred CHHHhhccCCEEEEeccccCCCcce-EEEECCHHHHHHHHHHHHHhCC------CcchhHHHHHHHHHHHHHH-----HH
Confidence 0011123478999999999988865 7777777776655321111110 00111 1111122223221 24
Q ss_pred HHHHHHHHHHHHHHHHHhc-CCeEe-ecCCeeEEEEecCCc-----HHHh-----hceeecc-------cCCEEEEEEcC
Q 011842 369 EVQKCLRNAHYLKDRLLDA-GISAM-LNELSSTVVFERPQD-----EEFV-----RRWQLAC-------QGNIAHVVVMP 429 (476)
Q Consensus 369 ~~~~~~~~a~~l~~~L~~~-g~~~~-~~~~~~iv~f~~~~~-----~~~~-----~~~~l~~-------~~~~lRv~~~~ 429 (476)
.+++..++++++.+.|++. |+... .++.++.+++..+.. ..+. ++..+.. ...++|+++..
T Consensus 259 ~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~g~~~~~~~~~~~r~~i~~ 338 (359)
T 3pj0_A 259 KMAEYFEAAKGLAERFNSCSGVKTVPEVPVSNMFHVYFENSADEIGAILTKIQDETGVGISGYLQEKSADVCAFEVSVGD 338 (359)
T ss_dssp GHHHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEEEESSCHHHHHHHHHHHHHHHCEECCSCCEEEETTEEEEEEECCT
T ss_pred HhHHHHHHHHHHHHHHhhCCCceeeccCCcceEEEEEecCccchhHHHHHHHHHhcCcEecCCccccCCCceEEEEEecC
Confidence 4556778889999999997 54433 345677777765432 1222 2232221 12467887754
Q ss_pred C---CCHHHHHHHHHHHHHH
Q 011842 430 N---VTIDKLDDFLNELIEN 446 (476)
Q Consensus 430 ~---~T~edid~~~~~l~~~ 446 (476)
. .+.++++..++.|.+.
T Consensus 339 ~~~~~~~e~l~~~l~~l~~~ 358 (359)
T 3pj0_A 339 AFAEIPAKNLELVFRCLEKE 358 (359)
T ss_dssp TGGGSCHHHHHHHHHHHHHH
T ss_pred ccccCCHHHHHHHHHHHHhc
Confidence 4 4788888888777653
No 197
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.83 E-value=9.7e-18 Score=173.86 Aligned_cols=295 Identities=9% Similarity=-0.008 Sum_probs=177.6
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhh---CC---CcEEEecCCCchHHHHHHHHc-C------
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREV---FP---DGILYASRESHYSVFKAARMY-R------ 205 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~---~p---~~~Vl~s~~~H~S~~~~~~~~-G------ 205 (476)
+...++.++++++++.+. ..++||+|||+|+..|+.+++.. .. ++.|++.+++|+.....+..+ |
T Consensus 87 ~~~~~la~~l~~~~~~~~--~~v~~~~sGseA~~~al~~~~~~~~~~G~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~ 164 (448)
T 3dod_A 87 VPATQLAETLIDISPKKL--TRVFYSDSGAEAMEIALKMAFQYWKNIGKPEKQKFIAMKNGYHGDTIGAVSVGSIELFHH 164 (448)
T ss_dssp HHHHHHHHHHHHHSCTTE--EEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEEC---------------------
T ss_pred HHHHHHHHHHHHhCCCCC--CEEEEeCchHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCCCccHHHHHhcCCccccc
Confidence 677788899999986543 35999999999999999998863 22 478888887765443322222 2
Q ss_pred ------CeEEEEeCCCCCc-----------cCHHHHHHHHHcCCCCcEEEEEeeCC-CccccccC----HHHHHHHHHHh
Q 011842 206 ------MECVKVDCLISGE-----------IDCADFKAKLLQNKDKPAIINVNIGT-TVKGAVDD----LDLVIQTLEES 263 (476)
Q Consensus 206 ------~~v~~v~~~~~g~-----------~D~~~Le~~l~~~~~~p~~vv~t~gt-t~tG~id~----l~~I~~ia~~~ 263 (476)
..+..+|.+...+ .|+++|+++|.+...++.+|+++... ++.|.+.+ +++|.++|++|
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~ 244 (448)
T 3dod_A 165 VYGPLMFESYKAPIPYVYRSESGDPDECRDQCLRELAQLLEEHHEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTY 244 (448)
T ss_dssp --------CEEECCCCCTTSSSCCHHHHHHHHHHHHHHHHHHHGGGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHT
T ss_pred cccCCCCCceEeCCCccccCCccchhhhhHHHHHHHHHHHHhCCCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHh
Confidence 1234455443222 35899999998433334466665555 78887766 99999999999
Q ss_pred CCCCCceEEEEecCcccccccccccCCCCCCcc-cccEEEEcCCCCCCCCC-CceeEEeehhhhhhhcCC---cc-ccCC
Q 011842 264 GFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKK-PIGSVSVSGHKFVGCPM-PCGVQITRMEHINVLSSN---VE-YLAS 337 (476)
Q Consensus 264 g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~-~~Dsi~~s~hK~l~~p~-~~G~l~~~~~~~~~l~~~---~~-yl~~ 337 (476)
|+ +|++|++|.++........ ..... ..|+++++ |.++.++ ++|+++.++++++.+... .. +..
T Consensus 245 ~~-----~lI~DEv~~g~g~~g~~~a--~~~~~~~~di~t~s--K~l~~G~~~ig~v~~~~~~~~~~~~~~~~~~~~~~- 314 (448)
T 3dod_A 245 DV-----LMIVDEVATGFGRTGKMFA--CEHENVQPDLMAAG--KGITGGYLPIAVTFATEDIYKAFYDDYENLKTFFH- 314 (448)
T ss_dssp TC-----EEEEECTTTTTTTTSSSSG--GGGGTCCCSEEEEC--GGGGTTSSCCEEEEEEHHHHHTTCSCGGGCCCCCC-
T ss_pred CC-----EEEEeccccCCCcccchhh--hhhcCCCCCEEEec--ccccCCcCceEEEEECHHHHHHhhhccccCCcccc-
Confidence 99 9999999986432211100 11111 25777654 9888885 999999999887766431 00 110
Q ss_pred CCCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHh---cCCeEeecCCeeEEEEecCCc-------
Q 011842 338 RDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLD---AGISAMLNELSSTVVFERPQD------- 407 (476)
Q Consensus 338 ~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~---~g~~~~~~~~~~iv~f~~~~~------- 407 (476)
..++. ..++.+.+++..+..-.-++.+++..++.+++++.|++ .+......+...++.+..+.+
T Consensus 315 -~~t~~-----~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 388 (448)
T 3dod_A 315 -GHSYT-----GNQLGCAVALENLALFESENIVEQVAEKSKKLHFLLQDLHALPHVGDIRQLGFMCGAELVRSKETKEPY 388 (448)
T ss_dssp -CCTTT-----TCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEETTEEEEEECSBTTTTBCC
T ss_pred -cCCCC-----cCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeeeEEEEEEEccCccccccc
Confidence 01111 12344444444432111134566666677777777765 332222222233444443321
Q ss_pred -------HHHh-----hceeecccCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 011842 408 -------EEFV-----RRWQLACQGNIAHVVVMPNVTIDKLDDFLNELIENRSTWY 451 (476)
Q Consensus 408 -------~~~~-----~~~~l~~~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~ 451 (476)
..+. ++..+...++.+|++++..+|+++|++++++|+++.+++.
T Consensus 389 ~~~~~~~~~~~~~l~~~Gv~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 444 (448)
T 3dod_A 389 PADRRIGYKVSLKMRELGMLTRPLGDVIAFLPPLASTAEELSEMVAIMKQAIHEVT 444 (448)
T ss_dssp CGGGCHHHHHHHHHHHTTEECCEETTEEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred chhhHHHHHHHHHHHHCCcEEeccCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 1221 2333434468999999999999999999999999988765
No 198
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.83 E-value=2.3e-19 Score=181.87 Aligned_cols=283 Identities=11% Similarity=0.041 Sum_probs=178.0
Q ss_pred HHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCC---CchHHHHHHHHcCCeEEEEeCC
Q 011842 138 RQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRE---SHYSVFKAARMYRMECVKVDCL 214 (476)
Q Consensus 138 ~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~---~H~S~~~~~~~~G~~v~~v~~~ 214 (476)
..+++++.+++++++|.++ +...++|+|||+|+..++.++ ||+.|+++.+ .|+++...++..|++++.+
T Consensus 57 ~~~~~~~~~~~a~~~g~~~-~~~~~~~~ggt~a~~~~~~~~----~gd~Vl~~~~~y~~~~~~~~~~~~~g~~~~~v--- 128 (374)
T 2aeu_A 57 SYFAEKVNEYGLKHLGGDE-NDKCVGFNRTSSAILATILAL----KPKKVIHYLPELPGHPSIERSCKIVNAKYFES--- 128 (374)
T ss_dssp HHHHHHHHHHHHHHHTCCT-TEEEEEESSHHHHHHHHHHHH----CCSEEEEECSSSSCCTHHHHHHHHTTCEEEEE---
T ss_pred hHHHHHHHHHHHHHhCCCC-cceEEEEcChHHHHHHHHHhC----CCCEEEEecCCCCccHHHHHHHHHcCcEEEEe---
Confidence 4667888888999999852 234899999999999998865 8899999999 4566556788889998888
Q ss_pred CCCccCHHHHHHHHHcCCCCcEE-EEEeeCCCccc-cccCHHHHHHHHHHhCCCCCceEEEEecCcccccc-cccccCCC
Q 011842 215 ISGEIDCADFKAKLLQNKDKPAI-INVNIGTTVKG-AVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMM-PFVKKAPK 291 (476)
Q Consensus 215 ~~g~~D~~~Le~~l~~~~~~p~~-vv~t~gtt~tG-~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~-~~~~~~~~ 291 (476)
.|+++|+++ .+ ++.+ |+++++++++| ...++++|.++|++||+ ++|+|++|+.+.. +.... ..
T Consensus 129 ----~d~~~l~~~-~~---~~~~~v~~~~p~nptG~~~~~l~~i~~l~~~~~~-----~li~De~~~~~~~~~~~~~-~~ 194 (374)
T 2aeu_A 129 ----DKVGEILNK-ID---KDTLVIITGSTMDLKVIELENFKKVINTAKNKEA-----IVFVDDASGARVRLLFNQP-PA 194 (374)
T ss_dssp ----SCHHHHHTT-CC---TTEEEEEECBCTTSCBCCHHHHHHHHHHHHHHTC-----CEEEECTTHHHHHHHTTCC-CH
T ss_pred ----CCHHHHHhc-CC---CccEEEEEccCCCCCCCCcccHHHHHHHHHHcCC-----EEEEECCcccccccccccC-Cc
Confidence 288999887 33 3447 88888999999 89999999999999999 9999999976531 11110 00
Q ss_pred CCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHH
Q 011842 292 VSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQ 371 (476)
Q Consensus 292 ~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~ 371 (476)
. ...+|+++.|+||++++ +++|+++.++++++.+.....+. ..+.+......+..++..+..+.+++..+
T Consensus 195 ~--~~~~di~~~S~sK~l~g-~~~G~~~~~~~~~~~l~~~~~~~-------~~~~~~~~~~a~~~al~~~~~~~~~~~~~ 264 (374)
T 2aeu_A 195 L--KLGADLVVTSTDKLMEG-PRGGLLAGKKELVDKIYIEGTKF-------GLEAQPPLLAGIYRALKNFNLERIRKAFE 264 (374)
T ss_dssp H--HHTCSEEEEETTSSSSS-CSCEEEEEEHHHHHHHHHHHHTT-------TCBCCHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred c--ccCCcEEEecCcccccC-cceEEEEECHHHHHHHHHhhccc-------cCCCCHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 1 11368999999999774 69999999988766553222111 11111111222223333332112222222
Q ss_pred HHHHH----HHHHHHHHHhc----CCeEeecCCeeEEEEe-cCCcH----------HHh--hceeec------ccCCEEE
Q 011842 372 KCLRN----AHYLKDRLLDA----GISAMLNELSSTVVFE-RPQDE----------EFV--RRWQLA------CQGNIAH 424 (476)
Q Consensus 372 ~~~~~----a~~l~~~L~~~----g~~~~~~~~~~iv~f~-~~~~~----------~~~--~~~~l~------~~~~~lR 424 (476)
+...+ .+.|.+.|... |+....++...++.+. .+... .+. ++..+. ...+.+|
T Consensus 265 ~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~~g~~~~~~~~~lR 344 (374)
T 2aeu_A 265 RAKNFDLSKIEKLNKELKAIDDNINIVYERTPTGFVIKRVYKDDTINIKKLIEIGFNLLKNYGIITITVAGMPGASKSLR 344 (374)
T ss_dssp HHHHCCCHHHHHHHHHHTTTCTTEEEEEEECSSEEEEEEEESSHHHHHHHHHHHHHHHHHHHCEECSTTSSSCSSCCSEE
T ss_pred HHHHHHHHHHHHHHHhhhhhhhccCcceeeCCceEEEEeecccccccccchHHHHHHHHHhCCEEEecCCCCCCCCCeEE
Confidence 22222 24444444432 3322223333333332 22110 111 233331 1235799
Q ss_pred EEEcC-CCCHHHHHHHHHHHHHHHHHHHh
Q 011842 425 VVVMP-NVTIDKLDDFLNELIENRSTWYE 452 (476)
Q Consensus 425 v~~~~-~~T~edid~~~~~l~~~~~~~~~ 452 (476)
++++. ..+++++++++++|+++.+++++
T Consensus 345 i~~~~~~~~~~~l~~l~~~l~~~l~~~~~ 373 (374)
T 2aeu_A 345 IDLTSRDAERIDDNYIIKAIVESIKMAFK 373 (374)
T ss_dssp EETTSGGGGGSCHHHHHHHHHHHHHHHTC
T ss_pred EEcCCchHHHHHHHHHHHHHHHHHHHHhc
Confidence 99864 44555699999999999887653
No 199
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=99.72 E-value=3.4e-22 Score=203.44 Aligned_cols=291 Identities=9% Similarity=-0.000 Sum_probs=198.3
Q ss_pred hHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCC-C
Q 011842 137 SRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCL-I 215 (476)
Q Consensus 137 ~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~-~ 215 (476)
..++++++.+++.+.+|.+.+...+++|+|+++|+..++.++.. +++.|++..++|.++...++..|++++.+|.+ .
T Consensus 68 ~~~l~~~la~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~--~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~ 145 (392)
T 3b1d_A 68 SDELLQAVLDWEKSEHQYSFDKEDIVFVEGVVPAISIAIQAFTK--EGEAVLINSPVYPPFARSVRLNNRKLVSNSLKEE 145 (392)
Confidence 45888999999998888543334689999999999999888765 88999999999999999999999999999985 3
Q ss_pred C--CccCHHHHHHHHH-cCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCcccccccccccC
Q 011842 216 S--GEIDCADFKAKLL-QNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKA 289 (476)
Q Consensus 216 ~--g~~D~~~Le~~l~-~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~ 289 (476)
+ +.+|+++|++++. .++ .+|+++++.+++|.+.+ +++|+++|++||+ ++++|++|+.+.+......
T Consensus 146 ~g~~~~d~~~l~~~l~~~~~---~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~-----~li~De~~~~~~~~g~~~~ 217 (392)
T 3b1d_A 146 NGLFQIDFEQLENDIVENDV---KLYLLCNPHNPGGRVWEREVLEQIGHLCQKHHV-----ILVSDEIHQDLTLFGHEHV 217 (392)
Confidence 2 4589999999997 333 36667889999999865 9999999999999 9999999987665322221
Q ss_pred CCCCCc---ccccEEEEcCCCCCC-CCCCceeEEeehh-hhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHh--C
Q 011842 290 PKVSFK---KPIGSVSVSGHKFVG-CPMPCGVQITRME-HINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRK--G 362 (476)
Q Consensus 290 ~~~~~~---~~~Dsi~~s~hK~l~-~p~~~G~l~~~~~-~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~--g 362 (476)
+...+. ...+++..+++|+++ .++++|+++++++ +++.+....... ++ ++. ..+.++++...+ +
T Consensus 218 ~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~-----~~-~~~---~~~~~~a~~~~l~~~ 288 (392)
T 3b1d_A 218 SFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAIIENPTLCAQFKHQQLVN-----NH-HEV---SSLGYIATETAYRYG 288 (392)
Confidence 112221 124577788999997 7889999998765 655543221111 00 111 123333333322 2
Q ss_pred hhcHHHHHHHHHHHHHHHHHHHHh-cCCeEeecCCeeEEE-EecCC----cHHHhh------ceeecc-------cCCEE
Q 011842 363 YKGFQKEVQKCLRNAHYLKDRLLD-AGISAMLNELSSTVV-FERPQ----DEEFVR------RWQLAC-------QGNIA 423 (476)
Q Consensus 363 ~~g~~~~~~~~~~~a~~l~~~L~~-~g~~~~~~~~~~iv~-f~~~~----~~~~~~------~~~l~~-------~~~~l 423 (476)
.+.+++..++..++++++.+.|++ .+...+.++..+++. +..+. ..++.+ ++.+.. ..+.+
T Consensus 289 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~i 368 (392)
T 3b1d_A 289 KPWLVALKAVLEENIQFAVEYFAQEAPRLKVMKPQGTYLIWLDFSDYGLTDDALFTLLHDQAKVILNRGSDYGSEGELHA 368 (392)
Confidence 344667777888888999999887 432233344444443 44432 122222 222211 23578
Q ss_pred EEEEcCCCCHHHHHHHHHHHHHHHH
Q 011842 424 HVVVMPNVTIDKLDDFLNELIENRS 448 (476)
Q Consensus 424 Rv~~~~~~T~edid~~~~~l~~~~~ 448 (476)
|+++.. ++++|+.+++.|.++.+
T Consensus 369 Ri~~~~--~~e~i~~~l~~l~~~l~ 391 (392)
T 3b1d_A 369 RLNIAA--PKSLVEEICKRIVCCLP 391 (392)
Confidence 888653 68999999999887653
No 200
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.83 E-value=4.7e-19 Score=182.24 Aligned_cols=236 Identities=12% Similarity=0.105 Sum_probs=169.9
Q ss_pred HHHHHHHHHHHcCCCCCcccEEE---cCCchhHHHHHHHHHHhhCCCcEEEecC-CCchHHH-----------HHHHHcC
Q 011842 141 EVGVLDWFARLWELENNEYWGYI---TNCGTEGNLHGILVGREVFPDGILYASR-ESHYSVF-----------KAARMYR 205 (476)
Q Consensus 141 e~~~~~~la~l~g~~~~~~~g~~---t~ggt~An~~al~aa~~~~p~~~Vl~s~-~~H~S~~-----------~~~~~~G 205 (476)
.+++.+.+++++|.+. .++ ++|||+||..++.+... |||.|++++ +.|.... ..++..|
T Consensus 76 ~~~Le~~lA~l~g~e~----alv~p~~~sGt~A~~~al~all~--pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G 149 (427)
T 3hvy_A 76 RDSLDRVYANIFNTES----AFVRPHFVNGTHAIGAALFGNLR--PNDTMMSICGMPYDTLHDIIGMDDSKKVGSLREYG 149 (427)
T ss_dssp HHHHHHHHHHHHTCSE----EEEETTCCSHHHHHHHHHHHTCC--TTCEEEECSSSCCGGGHHHHTCCTTCCSCCTGGGT
T ss_pred HHHHHHHHHHHhCCCc----eEEeCCCCcHHHHHHHHHHHhcC--CCCEEEEeCCCCchhHHHHhccccchhhhHHHHcC
Confidence 4555677889999864 466 89999999998887765 999999998 7776554 3445679
Q ss_pred CeEEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEee----CCCccccccCHHHHHHHHHH--hCCCCCceEEEEecCcc
Q 011842 206 MECVKVDCLISGEIDCADFKAKLLQNKDKPAIINVNI----GTTVKGAVDDLDLVIQTLEE--SGFTQDRFYIHCDGALF 279 (476)
Q Consensus 206 ~~v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~----gtt~tG~id~l~~I~~ia~~--~g~~~~~~~lhvD~a~~ 279 (476)
++++.++. +++.+|+++|++++.+.. ++.+|++++ +++++|.+.|+++|+++|++ ||+ ++++|++|+
T Consensus 150 ~~~~~v~~-~~~~~d~e~l~~~i~~~~-~tklV~i~~s~gyp~nptg~v~dl~~i~~ia~~~~~g~-----~livD~a~~ 222 (427)
T 3hvy_A 150 VKYKMVDL-KDGKVDINTVKEELKKDD-SIKLIHIQRSTGYGWRKSLRIAEIAEIIKSIREVNENV-----IVFVDNCYG 222 (427)
T ss_dssp CEEEECCC-BTTBCCHHHHHHHHHHCT-TEEEEEEESSCCSSSSCCCCHHHHHHHHHHHHHHCSSS-----EEEEECTTC
T ss_pred CEEEEecC-CCCCcCHHHHHHHhhCCC-CCEEEEEECCCCCCCCccccHHHHHHHHHHHHHhCCCC-----EEEEECCcc
Confidence 99999998 688999999999998311 234888888 89999999999999999999 899 999999998
Q ss_pred cccccccccCCCCCCcccccEEEEcCCCCCCCC--CCceeEEeehhhhhhhcCC--ccccCCCCCcccCCCCChhHHHHH
Q 011842 280 GLMMPFVKKAPKVSFKKPIGSVSVSGHKFVGCP--MPCGVQITRMEHINVLSSN--VEYLASRDATIMGSRNGHAPIFLW 355 (476)
Q Consensus 280 g~~~~~~~~~~~~~~~~~~Dsi~~s~hK~l~~p--~~~G~l~~~~~~~~~l~~~--~~yl~~~~~~~~~sr~~~~~l~~~ 355 (476)
.+.+.. . .....+|+++.|+||+++++ ...|+++.++++++.+... ...+. ...+.... ..|
T Consensus 223 ~~~~~~-~-----p~~~gaDiv~~S~sK~lgg~g~~~GG~i~~~~~li~~l~~~~~~~~~g-----~~~~~~~~---~a~ 288 (427)
T 3hvy_A 223 EFVEEK-E-----PTDVGADIIAGSLIKNIGGGIATTGGYIAGKEEYVTQATFRVTVPGIG-----GECGSTFG---VMR 288 (427)
T ss_dssp TTTSSS-C-----GGGGTCSEEEEETTSGGGTTTCCSCEEEEECHHHHHHHHHHHSCTTTG-----GGCCCCTT---CHH
T ss_pred ccccCC-C-----CcccCCeEEEECCcccccccccceEEEEEECHHHHHHHHHHhhcCCcc-----cccCCCHH---HHH
Confidence 665321 1 11123899999999999863 3458999988877665331 11111 01111111 123
Q ss_pred HHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCee-----EEEEecCC
Q 011842 356 YTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSS-----TVVFERPQ 406 (476)
Q Consensus 356 ~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~-----iv~f~~~~ 406 (476)
.+++. ......++++..+++.++.+.|++.|+.+ .+..+. ++.|...+
T Consensus 289 ~~~~g--l~~~~~r~~~~~~~a~~la~~L~~~g~~V-~p~~~~~~~~li~~~~l~~ 341 (427)
T 3hvy_A 289 SLYEG--LFMAPHVTIEAVKGAVFCARIMELAGFDV-LPKYNDKRTDIIQAIKFND 341 (427)
T ss_dssp HHHHH--HHHHHHHHHHHHHHHHHHHHHHHHTTCEE-ESCTTSCCSSSEEEEECSS
T ss_pred HHHHh--HhHHHHHHHHHHHHHHHHHHHHHhCCCee-cCCCCCCCceEEEEEeCCC
Confidence 33332 24456788899999999999999999865 433333 77777654
No 201
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.82 E-value=1.1e-18 Score=180.80 Aligned_cols=280 Identities=11% Similarity=0.004 Sum_probs=180.1
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhh-------CCC-cEEEecCCC-chHHHHHHHHcC----
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREV-------FPD-GILYASRES-HYSVFKAARMYR---- 205 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~-------~p~-~~Vl~s~~~-H~S~~~~~~~~G---- 205 (476)
+...++.+++++++|.+ .+++|+||++|+..++.+++.. .++ +.|++.+++ |.+...++...|
T Consensus 118 ~~~~~l~~~la~~~g~~----~v~~~~sGseA~~~al~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~~~~~~g~~~~ 193 (439)
T 2oat_A 118 NVLGEYEEYITKLFNYH----KVLPMNTGVEAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTS 193 (439)
T ss_dssp SSHHHHHHHHHHHHTCS----EEEEESSHHHHHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHHHHTTCCCHHH
T ss_pred HHHHHHHHHHHHhcCCC----EEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHhHhhcCCChhc
Confidence 34455666777777743 3899999999999999988742 144 666666655 455555555555
Q ss_pred --------CeEEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCcccccc----CHHHHHHHHHHhCCCCCceEEE
Q 011842 206 --------MECVKVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVD----DLDLVIQTLEESGFTQDRFYIH 273 (476)
Q Consensus 206 --------~~v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id----~l~~I~~ia~~~g~~~~~~~lh 273 (476)
.+++.+|.+ |+++|+++|+. .++.+|+++...+++|.+. ++++|.++|++||+ +++
T Consensus 194 ~~~~~p~~~~v~~~~~~-----d~~~le~~l~~--~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gi-----llI 261 (439)
T 2oat_A 194 YDGFGPFMPGFDIIPYN-----DLPALERALQD--PNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQV-----LFI 261 (439)
T ss_dssp HTTSCSCCTTEEEECSS-----CHHHHHHHTTS--TTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTC-----EEE
T ss_pred ccCCCCCCCCeEEeCCC-----CHHHHHHHhCC--CCEEEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCC-----EEE
Confidence 467777764 89999999952 2344666665566788765 79999999999999 999
Q ss_pred EecCcccccccccccCCCCCCcc-cccEEEEcCCCCCCCC-CCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhH
Q 011842 274 CDGALFGLMMPFVKKAPKVSFKK-PIGSVSVSGHKFVGCP-MPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAP 351 (476)
Q Consensus 274 vD~a~~g~~~~~~~~~~~~~~~~-~~Dsi~~s~hK~l~~p-~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~ 351 (476)
+|++|.++... .... .++... ..|++ +++|+++++ +++|++++++++++.+.... ...++.++ ....
T Consensus 262 ~DEv~~g~g~~-g~~~-~~~~~~~~~Di~--t~sK~l~~G~~~~G~v~~~~~~~~~l~~~~-----~~~t~~~~--~~~~ 330 (439)
T 2oat_A 262 ADEIQTGLART-GRWL-AVDYENVRPDIV--LLGKALSGGLYPVSAVLCDDDIMLTIKPGE-----HGSTYGGN--PLGC 330 (439)
T ss_dssp EECTTTTTTTT-SSSS-GGGGGTCCCSEE--EECGGGGTTSSCCEEEEECHHHHTTSCTTS-----SCCSSTTC--HHHH
T ss_pred EeccccCCccC-Ccch-hHHHhCCCCcEE--EecccccCCCCCeEEEEECHHHHhccCCCC-----cccCCCcC--HHHH
Confidence 99999653221 1110 011111 26776 456999877 78999999988766553210 01122211 1222
Q ss_pred HHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCCeEe--ecCCeeEEEEecCC-----cHHHh-----hceeec-c
Q 011842 352 IFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAM--LNELSSTVVFERPQ-----DEEFV-----RRWQLA-C 418 (476)
Q Consensus 352 l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~--~~~~~~iv~f~~~~-----~~~~~-----~~~~l~-~ 418 (476)
....++++.+.. ++..++..+++++|.+.|++.++..+ .++..+++.+..+. ..++. +++.+. .
T Consensus 331 aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~g~~~~v~l~~~~~~~~~~l~~~l~~~Gv~v~~~ 407 (439)
T 2oat_A 331 RVAIAALEVLEE---ENLAENADKLGIILRNELMKLPSDVVTAVRGKGLLNAIVIKETKDWDAWKVCLRLRDNGLLAKPT 407 (439)
T ss_dssp HHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHTTSCTTTEEEEEEETTEEEEEECCCSSCCHHHHHHHHHHTTEECCBS
T ss_pred HHHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeeeEEEEEEecCccHHHHHHHHHHHHCCeEEecC
Confidence 223344444322 24667788899999999988754321 22233455555442 22232 233333 3
Q ss_pred cCCEEEEEEcCCCCHHHHHHHHHHHHHHHH
Q 011842 419 QGNIAHVVVMPNVTIDKLDDFLNELIENRS 448 (476)
Q Consensus 419 ~~~~lRv~~~~~~T~edid~~~~~l~~~~~ 448 (476)
..+.+|++++..+|++||++++++|+++.+
T Consensus 408 ~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~ 437 (439)
T 2oat_A 408 HGDIIRFAPPLVIKEDELRESIEIINKTIL 437 (439)
T ss_dssp SSSEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECccCCCHHHHHHHHHHHHHHHH
Confidence 357899998889999999999999998764
No 202
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.82 E-value=8e-19 Score=181.05 Aligned_cols=237 Identities=13% Similarity=0.091 Sum_probs=167.9
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHH----HHHHcCCeEEEEeCC
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFK----AARMYRMECVKVDCL 214 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~----~~~~~G~~v~~v~~~ 214 (476)
...+++++++++++|.+. .+++++|++|+..++.+... |++.|+++++.|.+... .++..|++++.++.+
T Consensus 82 p~~~~le~~lA~l~g~~~----~v~~~sG~~Ai~~al~al~~--~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~~~~v~~~ 155 (430)
T 3ri6_A 82 PTVEDLEQRLKNLTGALG----VLALGSGMAAISTAILTLAR--AGDSVVTTDRLFGHTLSLFQKTLPSFGIEVRFVDVM 155 (430)
T ss_dssp HHHHHHHHHHHHHHTCSE----EEEESCHHHHHHHHHHHHCC--TTCEEEEETTCCHHHHHHHHTHHHHTTCEEEEECTT
T ss_pred HHHHHHHHHHHHHHCCCc----EEEECCHHHHHHHHHHHHhC--CCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCC
Confidence 455667777888898863 67888899999999888755 89999999999988776 667889999999986
Q ss_pred CCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCC
Q 011842 215 ISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSF 294 (476)
Q Consensus 215 ~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~ 294 (476)
|+++|+++|.+++ .+|++++++|++|.+.|+++|+++|++||+ ++++|++|+.+.... . .
T Consensus 156 -----d~~~l~~ai~~~t---~~v~~e~p~NptG~~~dl~~i~~la~~~g~-----~livD~a~~~~~~~~--~-----~ 215 (430)
T 3ri6_A 156 -----DSLAVEHACDETT---KLLFLETISNPQLQVADLEALSKVVHAKGI-----PLVVDTTMTPPYLLE--A-----K 215 (430)
T ss_dssp -----CHHHHHHHCCTTE---EEEEEESSCTTTCCCCCHHHHHHHHHTTTC-----CEEEECTTSCTTTCC--G-----G
T ss_pred -----CHHHHHHhhCCCC---eEEEEECCCCCCCeecCHHHHHHHHHHcCC-----EEEEECCCcccccCC--h-----H
Confidence 8999999997654 488899999999999999999999999999 999999998544311 0 1
Q ss_pred cccccEEEEcCCCCCCCC--CCceeEEeehh--hh---------hhhcCCccccCC---CCCcccCCCCChhHHHHHHHH
Q 011842 295 KKPIGSVSVSGHKFVGCP--MPCGVQITRME--HI---------NVLSSNVEYLAS---RDATIMGSRNGHAPIFLWYTL 358 (476)
Q Consensus 295 ~~~~Dsi~~s~hK~l~~p--~~~G~l~~~~~--~~---------~~l~~~~~yl~~---~~~~~~~sr~~~~~l~~~~~l 358 (476)
..++|+++.|++|++++| .-.|+++.+.. +. +.+. ...|+.. ......++. ..++..|..+
T Consensus 216 ~~g~div~~S~sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g-~~~~i~~~~~~~~~~~g~~--~~~~~a~l~l 292 (430)
T 3ri6_A 216 RLGVDIEVLSSTKFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAG-PMAFLYKARKEVFQNLGPS--LSPHNAYLQS 292 (430)
T ss_dssp GGTCSEEEEECCCEEETTEEECCEEEEECSCSCGGGSTTTHHHHHHHG-GGHHHHHHHHTHHHHHCCC--CCHHHHHHHH
T ss_pred HcCCEEEEECCcccccCCCCceEEEEEECChHHhhhccchhhhhhhhc-hhhHHHHHHHHHHHhcCCC--CCHHHHHHHH
Confidence 123899999999999865 24556654332 20 0000 0000000 000011221 2245555554
Q ss_pred HHhChhcHHHHHHHHHHHHHHHHHHHHhcCCe-EeecCC----------------ee-EEEEecCC
Q 011842 359 NRKGYKGFQKEVQKCLRNAHYLKDRLLDAGIS-AMLNEL----------------SS-TVVFERPQ 406 (476)
Q Consensus 359 ~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~-~~~~~~----------------~~-iv~f~~~~ 406 (476)
+ +.+.+..++++..++++++.+.|++.+.. .+..|. .. ++.|..++
T Consensus 293 ~--~l~~l~~r~~~~~~na~~la~~L~~~p~v~~V~~P~l~~~p~~~~~~~~~g~Gg~~lsf~l~~ 356 (430)
T 3ri6_A 293 L--GLETMALRIERSCQNAQELAHWLLSIPQVKCVNHPSLPDSPFYAIAKRQFRYAGSILTFELES 356 (430)
T ss_dssp H--HHHHHHHHHHHHHHHHHHHHHHHTTCTTCEEEECTTSTTSTTHHHHHHHCSSCCSEEEEECSS
T ss_pred h--hhhhHHHHHHHHHHHHHHHHHHHhCCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECC
Confidence 4 34667888899999999999999987643 343332 33 88888764
No 203
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.82 E-value=1e-18 Score=181.89 Aligned_cols=294 Identities=12% Similarity=-0.043 Sum_probs=184.5
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhh------CCCcEEEecCCCchHHHHHHHHc--------
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREV------FPDGILYASRESHYSVFKAARMY-------- 204 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~------~p~~~Vl~s~~~H~S~~~~~~~~-------- 204 (476)
+...+++++++++++.+.+ .++||+|||+||..|+.+++.. ..++.|++.+.+|......+..+
T Consensus 118 ~~~~~L~e~la~~~~~~~~--~v~~~~sGseA~~~Alk~a~~~~~~~g~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~ 195 (457)
T 3tfu_A 118 EPAARLAKLLVDITPAGLD--TVFFSDSGSVSVEVAAKMALQYWRGRGLPGKRRLMTWRGGYHGDTFLAMSICDPHGGMH 195 (457)
T ss_dssp HHHHHHHHHHHHHSSTTEE--EEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHTTSCCC----
T ss_pred HHHHHHHHHHHHhCCCCcC--EEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEEcCCcCCccHHhhcccCCccccc
Confidence 5667888899999976543 4999999999999999998763 23446666555543322222222
Q ss_pred ------CCeEEEEeCC--CCCccCHHHHHHHHHcCCCCcEEEEEee-CCCccccccC----HHHHHHHHHHhCCCCCceE
Q 011842 205 ------RMECVKVDCL--ISGEIDCADFKAKLLQNKDKPAIINVNI-GTTVKGAVDD----LDLVIQTLEESGFTQDRFY 271 (476)
Q Consensus 205 ------G~~v~~v~~~--~~g~~D~~~Le~~l~~~~~~p~~vv~t~-gtt~tG~id~----l~~I~~ia~~~g~~~~~~~ 271 (476)
...+..++.. ..+..|+++|+++|++...++.+|+++. ..+++|.+.| +++|.++|++||+ +
T Consensus 196 ~~~~~~~~~~~~~~~p~~~~~~~d~~~le~~l~~~~~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gi-----l 270 (457)
T 3tfu_A 196 SLWTDVLAAQVFAPQVPRDYDPAYSAAFEAQLAQHAGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEV-----L 270 (457)
T ss_dssp ------CCCCEEECCCCSSCCHHHHHHHHHHHHHHGGGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTC-----E
T ss_pred ccccCCCCCceEecCCCcccCHHHHHHHHHHHHhCCCCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCC-----E
Confidence 1133444432 2234689999999985433445777776 6788898866 9999999999999 9
Q ss_pred EEEecCcccccccccccCCCCCCcc-cccEEEEcCCCCCCCC-CCceeEEeehhhhhhhcC--CccccCCCCCcccCCCC
Q 011842 272 IHCDGALFGLMMPFVKKAPKVSFKK-PIGSVSVSGHKFVGCP-MPCGVQITRMEHINVLSS--NVEYLASRDATIMGSRN 347 (476)
Q Consensus 272 lhvD~a~~g~~~~~~~~~~~~~~~~-~~Dsi~~s~hK~l~~p-~~~G~l~~~~~~~~~l~~--~~~yl~~~~~~~~~sr~ 347 (476)
+++|++|.++.... ... .++... ..|++++ .|.++++ +++|++++++++.+.+.. ...+... .++.
T Consensus 271 lI~DEv~~g~gr~G-~~~-a~~~~~~~pdiit~--sK~l~gG~~~lG~v~~~~~i~~~~~~~~~~~~~~~--~t~~---- 340 (457)
T 3tfu_A 271 LIFDEIATGFGRTG-ALF-AADHAGVSPDIMCV--GKALTGGYLSLAATLCTADVAHTISAGAAGALMHG--PTFM---- 340 (457)
T ss_dssp EEEECTTTTTTTTS-SSS-THHHHTCCCSEEEE--CGGGGTTSSCCEEEEEEHHHHHHHHHSSSCSCCCC--CTTT----
T ss_pred EEEEcCccCCcccc-chh-HhHhcCCCceEEEE--ChhhhCCCcceEEEEEcHHHHHHhhccCCCceeEe--cCCC----
Confidence 99999997643211 110 001111 2677755 4888877 599999999988776631 1111111 1111
Q ss_pred ChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcC---CeEeecCCeeEEEEecCC---cHHHh-----hceee
Q 011842 348 GHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAG---ISAMLNELSSTVVFERPQ---DEEFV-----RRWQL 416 (476)
Q Consensus 348 ~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g---~~~~~~~~~~iv~f~~~~---~~~~~-----~~~~l 416 (476)
..++.+.+++..+..-.-++..++..++.+++++.|++.. .........+++.+..+. ..++. +++.+
T Consensus 341 -~n~~a~aaa~aaL~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~v~~vr~~G~~~~i~l~~~~~~~~~~~~l~~~Gv~v 419 (457)
T 3tfu_A 341 -ANPLACAVSVASVELLLGQDWRTRITELAAGLTAGLDTARALPAVTDVRVCGAIGVIECDRPVDLAVATPAALDRGVWL 419 (457)
T ss_dssp -TCHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHGGGGGSTTEEEEEECSSCEEEEESSCCCHHHHHHHHHHTTEEC
T ss_pred -cCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcCCCeeeeecCCeEEEEEECCcccHHHHHHHHHHCCeEE
Confidence 1234444444433211112456677778888999888752 222222234455555432 12222 34444
Q ss_pred cccCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 011842 417 ACQGNIAHVVVMPNVTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 417 ~~~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~ 450 (476)
...++.+|+++...+|++||++++++|+++.+++
T Consensus 420 ~~~~~~lRi~p~~~~t~eei~~~l~~L~~~l~~~ 453 (457)
T 3tfu_A 420 RPFRNLVYAMPPYICTPAEITQITSAMVEVARLV 453 (457)
T ss_dssp CCBTTEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred EecCCEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence 4556889988888899999999999999988754
No 204
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.82 E-value=1.4e-18 Score=179.07 Aligned_cols=290 Identities=13% Similarity=0.026 Sum_probs=177.5
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCch-HHHHHHHHcC-----------C
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHY-SVFKAARMYR-----------M 206 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~-S~~~~~~~~G-----------~ 206 (476)
+...++.+.++++++.+.+ .+++|+||++|+..++.+++....++.|++.+++|. +...+....+ .
T Consensus 85 ~~~~~l~~~la~~~~~~~~--~v~~~~gg~ea~~~a~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~ 162 (433)
T 1zod_A 85 RPVVDLATRLANITPPGLD--RALLLSTGAESNEAAIRMAKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAV 162 (433)
T ss_dssp HHHHHHHHHHHHHSCTTCC--EEEEESCHHHHHHHHHHHHHHHHTCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCT
T ss_pred HHHHHHHHHHHHhCCCCcC--EEEEeCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCCChhHHhhcCCccccccCCCCC
Confidence 5566777888888887643 599999999999999988764224566776666543 3333332211 2
Q ss_pred eEEEEeCCCC------------CccCHHHHHHHHHcCC-CCcEEEEEeeCCCccccccC----HHHHHHHHHHhCCCCCc
Q 011842 207 ECVKVDCLIS------------GEIDCADFKAKLLQNK-DKPAIINVNIGTTVKGAVDD----LDLVIQTLEESGFTQDR 269 (476)
Q Consensus 207 ~v~~v~~~~~------------g~~D~~~Le~~l~~~~-~~p~~vv~t~gtt~tG~id~----l~~I~~ia~~~g~~~~~ 269 (476)
.++.++.... +.+|+++|+++|++.. .++.+|+++...+++|.+.+ +++|.++|++||+
T Consensus 163 ~~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~---- 238 (433)
T 1zod_A 163 GSFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGM---- 238 (433)
T ss_dssp TEEEECCCCTTSCCCEETTEECHHHHHHHHHHHHHHHCCSCEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTC----
T ss_pred CceEecCCcccccccCCchhhhHHHHHHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCC----
Confidence 4455554211 1357999999997521 23446666544577897766 9999999999999
Q ss_pred eEEEEecCcccccccccccCCCCCCcc-cccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCC
Q 011842 270 FYIHCDGALFGLMMPFVKKAPKVSFKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNG 348 (476)
Q Consensus 270 ~~lhvD~a~~g~~~~~~~~~~~~~~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~ 348 (476)
++++|++|+++.... ... .++... ..|++++ .|+++.++++|++++++++++.+... .+.. ..++.+
T Consensus 239 -~li~DEv~~~~g~~g-~~~-~~~~~~~~~di~s~--sK~~~~G~~ig~~~~~~~~~~~~~~~-~~~~--~~t~~~---- 306 (433)
T 1zod_A 239 -LLILDEAQTGVGRTG-TMF-ACQRDGVTPDILTL--SKTLGAGLPLAAIVTSAAIEERAHEL-GYLF--YTTHVS---- 306 (433)
T ss_dssp -EEEEECTTTTTTTTS-SSS-THHHHTCCCSEEEE--CHHHHTTSSCEEEEECHHHHHHHHHT-TCCC--CCTTTT----
T ss_pred -EEEEeccccCCCcCc-hHh-HHhhcCCCCCEEEe--cccccCCCCeeEEEEhHHHHHhhccC-CCCC--CCCCCc----
Confidence 999999998643211 100 011111 2566654 48887789999999998877665321 1110 011111
Q ss_pred hhHHHHHH---HHHHhChhcHHHHHHHHHHHHHHHHHHHHhc----CCeEeecCCeeEEEEecCC-----------cHHH
Q 011842 349 HAPIFLWY---TLNRKGYKGFQKEVQKCLRNAHYLKDRLLDA----GISAMLNELSSTVVFERPQ-----------DEEF 410 (476)
Q Consensus 349 ~~~l~~~~---~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----g~~~~~~~~~~iv~f~~~~-----------~~~~ 410 (476)
.++.+.+ +++.+..+ +..++..+++++++++|++. +.....++..+++.+..+. ...+
T Consensus 307 -~~~~~~a~~aal~~~~~~---~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~ 382 (433)
T 1zod_A 307 -DPLPAAVGLRVLDVVQRD---GLVARANVMGDRLRRGLLDLMERFDCIGDVRGRGLLLGVEIVKDRRTKEPADGLGAKI 382 (433)
T ss_dssp -CHHHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEEEEETTTTEECTTHHHHH
T ss_pred -CHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEEEEEEEEEecCccccCCChHHHHHH
Confidence 2333333 33333222 35667777888888888764 4322223333444444321 1222
Q ss_pred h-----hceeeccc---C--CEEEEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 011842 411 V-----RRWQLACQ---G--NIAHVVVMPNVTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 411 ~-----~~~~l~~~---~--~~lRv~~~~~~T~edid~~~~~l~~~~~~~ 450 (476)
. +++.+... + +.+|++++..+|+++|++++++|+++.+++
T Consensus 383 ~~~l~~~Gv~v~~~~~~~~~~~lRi~~~~~~t~~~i~~~l~~l~~~l~~~ 432 (433)
T 1zod_A 383 TRECMNLGLSMNIVQLPGMGGVFRIAPPLTVSEDEIDLGLSLLGQAIERA 432 (433)
T ss_dssp HHHHHHTTEECCEECCTTSCCEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCeEeccCCCCCCCEEEEECCcCCCHHHHHHHHHHHHHHHHHh
Confidence 2 23333222 2 789999888999999999999999887653
No 205
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=99.82 E-value=4.7e-19 Score=181.20 Aligned_cols=290 Identities=11% Similarity=0.006 Sum_probs=186.5
Q ss_pred hhHHHHHHHHHHHHHHcCCCCC---cccE--EEcCCchhHHHHHHHHHHhh-CCCcEEEecCCCchHHHHHHHHcCCeEE
Q 011842 136 HSRQFEVGVLDWFARLWELENN---EYWG--YITNCGTEGNLHGILVGREV-FPDGILYASRESHYSVFKAARMYRMECV 209 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~---~~~g--~~t~ggt~An~~al~aa~~~-~p~~~Vl~s~~~H~S~~~~~~~~G~~v~ 209 (476)
+..++++++.+|+. |.... +... ..|.||++|+..+..+++.. .+|+.|++++++|.++...++..|++++
T Consensus 80 g~~~lr~~ia~~~~---~~~~~~~~~~~i~~~~~~~g~ga~~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~ 156 (409)
T 4eu1_A 80 GIASFVEEAQKLCF---GPTCAALRDGRIASCQTLGGTGALRIGGDLLNRFVANCNRIYGPDVGYPNHESIFAKAGMELT 156 (409)
T ss_dssp CCHHHHHHHHHHHH---CSSCHHHHTTCEEEEEESHHHHHHHHHHHHGGGTSSSCCEEEEESSCCTHHHHHHHHTTCEEE
T ss_pred CcHHHHHHHHHHHc---CCCchhhccCceeeeecccchHHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHcCCeEE
Confidence 45688888888773 44310 1224 45899999988765544322 3789999999999999999999999999
Q ss_pred EEeCC--CCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEecCccccccc
Q 011842 210 KVDCL--ISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMP 284 (476)
Q Consensus 210 ~v~~~--~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~ 284 (476)
.+|++ +++.+|+++|++++.+..+...+++++++.|+||.+.+ +++|+++|++||+ ++++|++|+.+.+.
T Consensus 157 ~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~-----~li~De~y~~~~~~ 231 (409)
T 4eu1_A 157 PYSYYDPATKGLNLAGMLECLDKAPEGSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNH-----IPFVDMAYQGFATG 231 (409)
T ss_dssp EECCEETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTC-----EEEEEESCTTTTTS
T ss_pred EEEeecCcCCcCcHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCc-----EEEEeccccccccC
Confidence 99983 46789999999999864334457777899999999876 5669999999999 99999999876543
Q ss_pred cc--ccCCCCCC--cccccEEEEcCCCCCC-CCCCceeE--Eeeh-h----hhhhhcCCccccCCCCCcccCCCCChhHH
Q 011842 285 FV--KKAPKVSF--KKPIGSVSVSGHKFVG-CPMPCGVQ--ITRM-E----HINVLSSNVEYLASRDATIMGSRNGHAPI 352 (476)
Q Consensus 285 ~~--~~~~~~~~--~~~~Dsi~~s~hK~l~-~p~~~G~l--~~~~-~----~~~~l~~~~~yl~~~~~~~~~sr~~~~~l 352 (476)
.. ...+...+ ...-.++..+++|.++ .++++|++ ++.+ + +.+.+.....+. ..+. ..+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~riG~~~~v~~~~~~~~~l~~~~~~~~~~~-------~~~~---~~~ 301 (409)
T 4eu1_A 232 QLDYDAFVPRHLVDMVPNLIVAQSFSKNFGLYGHRCGALHISTASAEEAKRLVSQLALLIRPM-------YNNP---PLY 301 (409)
T ss_dssp CHHHHTHHHHHHHTTSSCCEEEEECTTTSSCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHHH-------HSSC---CHH
T ss_pred CcccchHHHHHHHhhCCcEEEEecCcccccCccCCceEEEEEeCCHHHHHHHHHHHHHHHhhh-------cCCC---ChH
Confidence 21 00000000 0112356678889886 67899997 5544 4 333332111110 1111 134
Q ss_pred HHHHHHHHhC--------hhcHHHHHHHHHHHHHHHHHHHHhcCC---eEeecCCeeEEEEecCCcH---HHhh--ceee
Q 011842 353 FLWYTLNRKG--------YKGFQKEVQKCLRNAHYLKDRLLDAGI---SAMLNELSSTVVFERPQDE---EFVR--RWQL 416 (476)
Q Consensus 353 ~~~~~l~~~g--------~~g~~~~~~~~~~~a~~l~~~L~~~g~---~~~~~~~~~iv~f~~~~~~---~~~~--~~~l 416 (476)
.++++...+. .+.+++..++..++++++.+.|++.|. ..+..+..+++.|.....+ .+.+ ++.+
T Consensus 302 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v 381 (409)
T 4eu1_A 302 GAWVVSSILKDPQLTALWKKELKQMSSRIAEVRKRLVSELKACGSVHDWSHIERQVGMMAYTGLTREQVELLRSEYHIYM 381 (409)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHHHHSCSSEEECCCCHHHHHHHHHHHCEEC
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcceecCCceEEEEeCCCHHHHHHHHHcCCEEE
Confidence 4444443332 234667788889999999999999873 1222344444444322221 1222 2333
Q ss_pred cccCCEEEEEEcCCCCHHHHHHHHHHHHHHH
Q 011842 417 ACQGNIAHVVVMPNVTIDKLDDFLNELIENR 447 (476)
Q Consensus 417 ~~~~~~lRv~~~~~~T~edid~~~~~l~~~~ 447 (476)
... .|+++.. .|.++|++++++|+++.
T Consensus 382 ~p~---~Ri~~~~-~~~~~i~~~~~~l~~~l 408 (409)
T 4eu1_A 382 TLN---GRAAVSG-LNSTNVEYVSQAIHNVT 408 (409)
T ss_dssp CTT---CEEEGGG-CCTTTHHHHHHHHHHHH
T ss_pred cCC---CEEEEEe-cCHhhHHHHHHHHHHHh
Confidence 322 4887764 45667999999998764
No 206
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.82 E-value=1e-18 Score=180.14 Aligned_cols=287 Identities=14% Similarity=0.074 Sum_probs=175.8
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHc-CC-----------
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMY-RM----------- 206 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~-G~----------- 206 (476)
+...+++++++++++ +. ..++||+|||+|+..++.+++...+++.|++.+++|..+...+... |.
T Consensus 95 ~~~~~l~~~la~~~~-~~--~~v~~~~sGsea~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~ 171 (434)
T 3l44_A 95 ALEVKFAKMLKEAMP-AL--DKVRFVNSGTEAVMTTIRVARAYTGRTKIMKFAGCYHGHSDLVLVAAGSGPSTLGTPDSA 171 (434)
T ss_dssp HHHHHHHHHHHHHCT-TC--SEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSGGGGBC-------CCCBSST
T ss_pred HHHHHHHHHHHHhCC-CC--CEEEEeCchHHHHHHHHHHHHHhhCCCEEEEEcCccCCCcHHHHhhcCCcccccCCCCcC
Confidence 455567777888876 32 3599999999999999998876446677877777654432222211 21
Q ss_pred --------eEEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC----HHHHHHHHHHhCCCCCceEEEE
Q 011842 207 --------ECVKVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD----LDLVIQTLEESGFTQDRFYIHC 274 (476)
Q Consensus 207 --------~v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~----l~~I~~ia~~~g~~~~~~~lhv 274 (476)
++..+|.+ |+++|+++|++......+|+++...+++|.+.| +++|.++|++||+ ++|+
T Consensus 172 ~~~~~~~~~~~~~~~~-----d~~~le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~i-----llI~ 241 (434)
T 3l44_A 172 GVPQSIAQEVITVPFN-----NVETLKEALDKWGHEVAAILVEPIVGNFGIVEPKPGFLEKVNELVHEAGA-----LVIY 241 (434)
T ss_dssp TCCHHHHTTEEEECTT-----CHHHHHHHHHHHGGGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTC-----EEEE
T ss_pred CCCCcCCCceEecCcc-----cHHHHHHHHHhCCCCEEEEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCC-----EEEE
Confidence 23344433 899999999854333456777666777888887 9999999999999 9999
Q ss_pred ecCcccccccccccCCCCCCcc-cccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHH
Q 011842 275 DGALFGLMMPFVKKAPKVSFKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIF 353 (476)
Q Consensus 275 D~a~~g~~~~~~~~~~~~~~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~ 353 (476)
|++|.++ ... ... ..+... ..|+++++ |.+++|+++|++++++++++.+........ .++- ...++.
T Consensus 242 DEv~~g~-~~g-~~~-~~~~~~~~~di~t~s--K~~~~G~~iG~~~~~~~i~~~~~~~~~~~~------~~t~-~~~~~a 309 (434)
T 3l44_A 242 DEVITAF-RFM-YGG-AQDLLGVTPDLTALG--KVIGGGLPIGAYGGKKEIMEQVAPLGPAYQ------AGTM-AGNPAS 309 (434)
T ss_dssp ECTTTTT-TSS-SSC-HHHHHTCCCSEEEEE--GGGGTTSSCEEEEECHHHHTTBTTTSSBCC------CCTT-TTCHHH
T ss_pred eccccce-ecc-ccH-HHHHcCCCCCeeehh--hhhcCCcCeeeEEEcHHHHHhhccCCCccc------CCCC-CcCHHH
Confidence 9999875 221 110 001111 25666554 888889999999999888766543211110 1111 112344
Q ss_pred HHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhc----CCeEeecCCeeEEEEecC-------------Cc---HHHh--
Q 011842 354 LWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDA----GISAMLNELSSTVVFERP-------------QD---EEFV-- 411 (476)
Q Consensus 354 ~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----g~~~~~~~~~~iv~f~~~-------------~~---~~~~-- 411 (476)
+.+++..+....-++.+++..++.+++++.|++. +.....+...+++.+... +. ..+.
T Consensus 310 ~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (434)
T 3l44_A 310 MASGIACLEVLQQEGLYEKLDELGATLEKGILEQAAKHNIDITLNRLKGALTVYFTTNTIEDYDAAQDTDGEMFGKFFKL 389 (434)
T ss_dssp HHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEETTEEEEEESSSCCCSHHHHHHSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEeeccEEEEEEecCcccchhhccccCHHHHHHHHHH
Confidence 4444433321001455666677777777777663 443333333344444331 11 1121
Q ss_pred ---hceeec-ccCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHh
Q 011842 412 ---RRWQLA-CQGNIAHVVVMPNVTIDKLDDFLNELIENRSTWYE 452 (476)
Q Consensus 412 ---~~~~l~-~~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~~ 452 (476)
++..+. .....+|+ +..+|+++|++++++|+++.+++.+
T Consensus 390 l~~~Gv~v~~~~~~~~rl--~~~~t~e~i~~~l~~l~~~l~~~~~ 432 (434)
T 3l44_A 390 MLQEGVNLAPSKYEAWFL--TTEHTKEDIEYTIEAVGRAFAALAD 432 (434)
T ss_dssp HHHTTEECCSSTTCCEEC--CTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHCCeEEeecCCCcEEE--ecccCHHHHHHHHHHHHHHHHHHHh
Confidence 233332 23345665 5678999999999999999887654
No 207
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.82 E-value=2.8e-18 Score=177.26 Aligned_cols=283 Identities=14% Similarity=0.078 Sum_probs=182.0
Q ss_pred HHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHH------h-hCCCcEEEecCCCchHHHHHHHHcCCeEEEEeC
Q 011842 141 EVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGR------E-VFPDGILYASRESHYSVFKAARMYRMECVKVDC 213 (476)
Q Consensus 141 e~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~------~-~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~ 213 (476)
..++++.+++++|.+ ..+++++||+|+..++.++. . ..+++.|+++.++|.++..+++..|++++.+++
T Consensus 64 ~~~l~~~la~~~g~~----~~i~~~sGt~a~~~al~~l~~~~~~~~~~~~gd~Vi~~~~~~~~~~~~~~~~g~~~~~v~~ 139 (437)
T 3bb8_A 64 NDAFEKKLGEYLGVP----YVLTTTSGSSANLLALTALTSPKLGVRALKPGDEVITVAAGFPTTVNPTIQNGLIPVFVDV 139 (437)
T ss_dssp HHHHHHHHHHHHTCS----EEEEESCHHHHHHHHHHHTTCGGGGGGSCCTTCEEEECSSSCHHHHHHHHHTTCEEEECCE
T ss_pred HHHHHHHHHHHHCCC----cEEEeCCHHHHHHHHHHHhhhcccccccCCCcCEEEECCCCcHHHHHHHHHcCCEEEEEec
Confidence 344555677778876 27899999999999988862 0 237899999999999999999999999999998
Q ss_pred CC-CCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCC
Q 011842 214 LI-SGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKV 292 (476)
Q Consensus 214 ~~-~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~ 292 (476)
++ ++.+|+++|++++.+++ .+|++++ ++|...|+++|.++|++||+ ++|+|++|+.+..+.... +
T Consensus 140 ~~~~~~~d~~~l~~~i~~~~---~~v~~~~---~~g~~~~~~~i~~l~~~~~~-----~li~D~a~~~g~~~~~~~---~ 205 (437)
T 3bb8_A 140 DIPTYNVNASLIEAAVSDKT---KAIMIAH---TLGNLFDLAEVRRVADKYNL-----WLIEDCCDALGSTYDGKM---A 205 (437)
T ss_dssp ETTTTEECGGGHHHHCCTTE---EEEEEEC---GGGCCCCHHHHHHHHHHHTC-----EEEEECTTCTTCEETTEE---T
T ss_pred cCccCCcCHHHHHHhcCCCC---eEEEEeC---CCCChhcHHHHHHHHHHcCC-----EEEEECccccCceECCee---c
Confidence 75 78999999999986544 3666654 46888999999999999999 999999998544332211 1
Q ss_pred CCcccccEEEEc---CCCCCCCCCCceeEEeehhhhhhh-cCCccccCC---------------------------CCCc
Q 011842 293 SFKKPIGSVSVS---GHKFVGCPMPCGVQITRMEHINVL-SSNVEYLAS---------------------------RDAT 341 (476)
Q Consensus 293 ~~~~~~Dsi~~s---~hK~l~~p~~~G~l~~~~~~~~~l-~~~~~yl~~---------------------------~~~~ 341 (476)
. ...|+++.+ +||+ . +...|+++.+++.+..+ .....+... ...+
T Consensus 206 ~--~~~d~~~~s~~~~k~l-~-~g~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (437)
T 3bb8_A 206 G--TFGDIGTVSFYPAKHI-T-MGEGGAVFTQSAELKSIIESFRDWGRDCYCAPGCDNTCKKRFGQQLGSLPFGYDHKYT 281 (437)
T ss_dssp T--SSSSEEEEECSTTSSS-C-CSSCEEEEESCHHHHHHHHHHHBTTBCC----------------CCSCCCTTCCGGGC
T ss_pred c--cccCEEEEECcCCcCC-C-CCCeEEEEeCCHHHHHHHHHHHHhCccccccccccccccccccccccccccccccccc
Confidence 1 125766555 3554 3 34568888876543221 100001000 0000
Q ss_pred --ccCCCCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhc-CCeEeecC------C-e-eEEEEecC---Cc
Q 011842 342 --IMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDA-GISAMLNE------L-S-STVVFERP---QD 407 (476)
Q Consensus 342 --~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~-g~~~~~~~------~-~-~iv~f~~~---~~ 407 (476)
..+.......+...+++..+ +.+.+.+++..++++++.+.|++. ++..+... . . .++.|..+ +.
T Consensus 282 ~~~~g~~~~~~~~~aa~~l~~l--~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (437)
T 3bb8_A 282 YSHLGYNLKITDMQAACGLAQL--ERIEEFVEKRKANFKYLKDALQSCADFIELPEATENSDPSWFGFPITLKEDSGVSR 359 (437)
T ss_dssp BCSCCCBCCCBHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHGGGGTTTEECCCCCTTEECCCSSEEEEECGGGSSCH
T ss_pred ccccCcccCCCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhhccCCccccCCCCCCCceeeEEEEEEECCcCcCcH
Confidence 01111111234443344333 344667777788999999999987 54433211 1 1 13335432 22
Q ss_pred HHHhh-----ceeec------c-----c------------------CCEEEEEEcCCCCHHHHHHHHHHHHHHH
Q 011842 408 EEFVR-----RWQLA------C-----Q------------------GNIAHVVVMPNVTIDKLDDFLNELIENR 447 (476)
Q Consensus 408 ~~~~~-----~~~l~------~-----~------------------~~~lRv~~~~~~T~edid~~~~~l~~~~ 447 (476)
+.+.+ ++.+. + . .+.+|+++++.+|++|||+++++|+++.
T Consensus 360 ~~l~~~L~~~GI~v~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~~di~~i~~~l~~~~ 433 (437)
T 3bb8_A 360 IDLVKFLDEAKVGTRLLFAGNLTRQPYFHDVKYRVVGELTNTDRIMNQTFWIGIYPGLTHDHLDYVVSKFEEFF 433 (437)
T ss_dssp HHHHHHHHHTTBCCBCCTTSSGGGSGGGSSCCCEECSCCHHHHHHHHHEEEECCSTTCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHCCCceeccCCcccccCchhhccCccccCCCcHHHHHhcCEEEecCCCCCCHHHHHHHHHHHHHHH
Confidence 22221 22110 1 0 1258999999999999999999998764
No 208
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.82 E-value=2.1e-18 Score=177.45 Aligned_cols=285 Identities=13% Similarity=0.020 Sum_probs=175.8
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHH-HHHHHHcC------------
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSV-FKAARMYR------------ 205 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~-~~~~~~~G------------ 205 (476)
+...++.++++++++ +. ..+++|+|||+|+..++.+++...+++.|++.+.+|+.. ..+....|
T Consensus 92 ~~~~~la~~l~~~~~-~~--~~v~~~~ggsea~~~al~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~ 168 (427)
T 3fq8_A 92 ALENVLAEMVNDAVP-SI--EMVRFVNSGTEACMAVLRIMRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSP 168 (427)
T ss_dssp HHHHHHHHHHHHHST-TC--SEEEEESSHHHHHHHHHHHHHHHHCCCEEEEEETCCCCSCGGGCSSCCTHHHHHTCCSCS
T ss_pred HHHHHHHHHHHHhCC-CC--CEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCCCHHHHHhcCCcccccCCCCCC
Confidence 677788899999887 33 359999999999999998776533445566555554332 11111111
Q ss_pred -------CeEEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC----HHHHHHHHHHhCCCCCceEEEE
Q 011842 206 -------MECVKVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD----LDLVIQTLEESGFTQDRFYIHC 274 (476)
Q Consensus 206 -------~~v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~----l~~I~~ia~~~g~~~~~~~lhv 274 (476)
..+..+|.+ |+++|++++++.+.++.+|+++...+++|.+.| +++|.++|++||+ ++++
T Consensus 169 ~~~~~~~~~~~~~~~~-----d~~~le~~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~-----~li~ 238 (427)
T 3fq8_A 169 GVPKKTTANTLTTPYN-----DLEAVKALFAENPGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDA-----LLVF 238 (427)
T ss_dssp SSCHHHHTTEEEEETT-----CHHHHHHHHHHSTTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTC-----EEEE
T ss_pred CCCCcccCceeecCCC-----CHHHHHHHHHhCCCCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCC-----EEEE
Confidence 124455543 899999999886555668888777888899988 9999999999999 9999
Q ss_pred ecCcccccccccccCCCCCCcc-cccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHH
Q 011842 275 DGALFGLMMPFVKKAPKVSFKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIF 353 (476)
Q Consensus 275 D~a~~g~~~~~~~~~~~~~~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~ 353 (476)
|++|+++ ....... .+... ..|.++++ |.+++++++|+++.++++++.+.....+... .++. ..++.
T Consensus 239 DEv~~g~-~~g~~~~--~~~~~~~~di~t~s--K~~~~G~~~G~~~~~~~~~~~~~~~~~~~~~--~t~~-----~~~~~ 306 (427)
T 3fq8_A 239 DEVITGF-RIAYGGV--QEKFGVTPDLTTLG--KIIGGGLPVGAYGGKREIMQLVAPAGPMYQA--GTLS-----GNPLA 306 (427)
T ss_dssp ECTTTBT-TTBTTHH--HHHTTCCCSEEEEC--GGGGTTSSCEEEEECHHHHTTBTTTSSBCCC--CTTT-----TCHHH
T ss_pred ecccccc-ccCcchh--hHhcCCCCChhhhh--hhhhCCcceEEEEEcHHHHHhhccCCCcccc--CCCC-----cCHHH
Confidence 9999865 3211100 00011 25766655 9888889999999998887766432211111 1111 12344
Q ss_pred HHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhc----CCeEeecCCeeEEEEecCCc----------------HHHh--
Q 011842 354 LWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDA----GISAMLNELSSTVVFERPQD----------------EEFV-- 411 (476)
Q Consensus 354 ~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----g~~~~~~~~~~iv~f~~~~~----------------~~~~-- 411 (476)
+++++..+..-.-++..++..++.+++++.|++. +.....+....++.+..+.. ..+.
T Consensus 307 ~aa~~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 386 (427)
T 3fq8_A 307 MTAGIKTLELLRQPGTYEYLDQITKRLSDGLLAIAQETGHAACGGQVSGMFGFFFTEGPVHNYEDAKKSDLQKFSRFHRG 386 (427)
T ss_dssp HHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEESSSCCCCSHHHHTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeeeEEEEEEecCccccccccccccHHHHHHHHHH
Confidence 4444433311001345666677777777777653 33222222234444543221 1121
Q ss_pred ---hceeecccCCEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Q 011842 412 ---RRWQLACQGNIAHVVVMPNVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 412 ---~~~~l~~~~~~lRv~~~~~~T~edid~~~~~l~~~~~~ 449 (476)
++..+...+ ..|++++..+|+++|++++++|+++.++
T Consensus 387 l~~~Gi~v~~~~-~~r~~~~~~~t~e~i~~~l~~l~~~l~~ 426 (427)
T 3fq8_A 387 MLEQGIYLAPSQ-FEAGFTSLAHTEEDIDATLAAARTVMSA 426 (427)
T ss_dssp HHHTTEECCSST-TSCEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHCCcEEecCC-CCCEEeeCcCCHHHHHHHHHHHHHHHHh
Confidence 222222222 2367778889999999999999988754
No 209
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.82 E-value=8.6e-18 Score=172.66 Aligned_cols=284 Identities=11% Similarity=-0.001 Sum_probs=182.4
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCch-HHHHHHHHcC------------
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHY-SVFKAARMYR------------ 205 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~-S~~~~~~~~G------------ 205 (476)
+...++.+.+++++|.+. ..++++|+||++|+..++.+++.. +++.|++.++++. +...+....|
T Consensus 86 ~~~~~l~~~la~~~~~~~-~~~v~~~~gg~ea~~~ai~~~~~~-~~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~ 163 (419)
T 2eo5_A 86 IPQLELAKKLVTYSPGNF-QKKVFFSNSGTEAIEASIKVVKNT-GRKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPF 163 (419)
T ss_dssp HHHHHHHHHHHHHSSCSS-CEEEEEESSHHHHHHHHHHHHHTT-SCCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCC
T ss_pred HHHHHHHHHHHHhCCCCc-CCEEEEeCchHHHHHHHHHHHHHh-hCCcEEEECCCcCCCCHhhHhhcCCccccccccCCC
Confidence 445667788899999862 235999999999999999987752 3777777776543 4444443322
Q ss_pred -CeEEEEeCCCCCc----------------cCHHHHH-HHHHcCC--CCcEEEEEeeCCCccccccC----HHHHHHHHH
Q 011842 206 -MECVKVDCLISGE----------------IDCADFK-AKLLQNK--DKPAIINVNIGTTVKGAVDD----LDLVIQTLE 261 (476)
Q Consensus 206 -~~v~~v~~~~~g~----------------~D~~~Le-~~l~~~~--~~p~~vv~t~gtt~tG~id~----l~~I~~ia~ 261 (476)
.+++.+|.+.+.+ +|+++|+ +++++.. .++.+|+++...+++|.+.+ +++|.++|+
T Consensus 164 ~~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~ 243 (419)
T 2eo5_A 164 MPGVIHVPYPNPYRNPWHINGYENPSELVNRVIEFIEDYIFVNLVPPEEVAGIFFEPIQGEGGYVIPPKNFFAELQKLAK 243 (419)
T ss_dssp CTTEEEECCCCSSSCTTCCCTTTCHHHHHHHHHHHHHHTHHHHTCCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHH
T ss_pred CCCCEEECCCccccccccccccccchhhHHHHHHHHHHHHHhhccCCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHH
Confidence 3577888764422 5789999 9987531 22346666544567898766 999999999
Q ss_pred HhCCCCCceEEEEecCcccccccccccCCCCCCcc-cccEEEEcCCCCCCCC-CCceeEEeehhhhhhhcCCccccCCCC
Q 011842 262 ESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKK-PIGSVSVSGHKFVGCP-MPCGVQITRMEHINVLSSNVEYLASRD 339 (476)
Q Consensus 262 ~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~-~~Dsi~~s~hK~l~~p-~~~G~l~~~~~~~~~l~~~~~yl~~~~ 339 (476)
+||+ ++|+|++|.++.... ... .++... ..|++++ .|.++.| +++|+++++++++ .+ .. .+ .
T Consensus 244 ~~~~-----~li~DE~~~~~g~~g-~~~-~~~~~~~~~d~~t~--sK~~~~G~~riG~~~~~~~~~-~~-~~-~~----~ 307 (419)
T 2eo5_A 244 KYGI-----LLVDDEVQMGLGRTG-KLF-AIENFNTVPDVITL--AKALGGGIMPIGATIFRKDLD-FK-PG-MH----S 307 (419)
T ss_dssp HHTC-----EEEEECTTTTTTTTS-SSS-GGGGGTCCCSEEEE--CGGGGTTTSCCEEEEEEGGGC-CC-----------
T ss_pred HcCC-----EEEEeccccCCccCc-chh-hHHhcCCCCCEEEe--cccccCCccceEEEEEchHhh-cC-Cc-cc----C
Confidence 9999 999999998643221 110 011111 2577654 4888778 9999999998765 44 10 00 0
Q ss_pred CcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCeeEEEEecCCc---HHHhh----
Q 011842 340 ATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSSTVVFERPQD---EEFVR---- 412 (476)
Q Consensus 340 ~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~~---~~~~~---- 412 (476)
.++ +. ..+.+.+++..+. .+++..++..+++++|.+.|++. +..+ ++..+++.+...++ ..+.+
T Consensus 308 ~t~--~~---n~~~~~aa~aal~--~~~~~~~~~~~~~~~l~~~L~~~-~~~~-~~~g~~~~i~~~~~~~~~~~~~~l~~ 378 (419)
T 2eo5_A 308 NTF--GG---NALACAIGSKVID--IVKDLLPHVNEIGKIFAEELQGL-ADDV-RGIGLAWGLEYNEKKVRDRIIGESFK 378 (419)
T ss_dssp -CC--CC---CHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHTTS-SSEE-EEETTEEEEECSCHHHHHHHHHHHHH
T ss_pred CCC--CC---CHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHh-hhhe-EeeeEEEEEEEecCccHHHHHHHHHH
Confidence 111 11 2344444444431 12337788888999999999876 2222 33345666665321 11322
Q ss_pred -ceeec-ccCCEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Q 011842 413 -RWQLA-CQGNIAHVVVMPNVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 413 -~~~l~-~~~~~lRv~~~~~~T~edid~~~~~l~~~~~~ 449 (476)
+..+. ...+.+|++++..+|++++++++++|+++.++
T Consensus 379 ~Gv~v~~~~~~~lRis~~~~~t~e~i~~~l~~l~~~l~~ 417 (419)
T 2eo5_A 379 RGLLLLPAGRSAIRVIPPLVISEEEAKQGLDILKKVIKV 417 (419)
T ss_dssp TTEECEEETTTEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCEEecCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 23332 33578999988899999999999999988654
No 210
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.82 E-value=4.6e-18 Score=176.46 Aligned_cols=291 Identities=10% Similarity=0.029 Sum_probs=174.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHH-H----------HcCC
Q 011842 138 RQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAA-R----------MYRM 206 (476)
Q Consensus 138 ~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~-~----------~~G~ 206 (476)
.++++++.++++++++ +. ..+++|+||++|+..++.+++...+++.|++.+++|..+...+ . ..|+
T Consensus 96 ~~~~~~la~~l~~~~~-~~--~~v~~~~gg~eA~~~al~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~ 172 (453)
T 2cy8_A 96 HPLEVRWAERIVAAFP-SI--RKLRFTGSGTETTLLALRVARAFTGRRMILRFEGHYHGWHDFSASGYNSHFDGQPAPGV 172 (453)
T ss_dssp CHHHHHHHHHHHHHCT-TC--SEEEEESCHHHHHHHHHHHHHHHHCCCEEEEECC-------------------------
T ss_pred CHHHHHHHHHHHhhCC-CC--CEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEEcCCcCCCchhhHhhcCCccCCCcCCCC
Confidence 3889999999999986 33 3599999999999999998764324455666666655332211 1 1233
Q ss_pred ------eEEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC----HHHHHHHHHHhCCCCCceEEEEec
Q 011842 207 ------ECVKVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD----LDLVIQTLEESGFTQDRFYIHCDG 276 (476)
Q Consensus 207 ------~v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~----l~~I~~ia~~~g~~~~~~~lhvD~ 276 (476)
.+..++. .|+++|+++|++...++.+|+++...+++|.+.| +++|.++|++||+ +|++|+
T Consensus 173 ~~~~~~~~~~~~~-----~d~~~le~~l~~~~~~~~~vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~-----~lI~DE 242 (453)
T 2cy8_A 173 LPETTANTLLIRP-----DDIEGMREVFANHGSDIAAFIAEPVGSHFGVTPVSDSFLREGAELARQYGA-----LFILDE 242 (453)
T ss_dssp ---CGGGEEEECT-----TCHHHHHHHHHHHGGGEEEEEECSSEHHHHTEECCHHHHHHHHHHHHHTTC-----EEEEEC
T ss_pred CccccCceeecCC-----CCHHHHHHHHHhcCCCEEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCC-----EEEEec
Confidence 2444443 3899999999753223446666655567898877 9999999999999 999999
Q ss_pred CcccccccccccCCCCCCcc-cccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHH
Q 011842 277 ALFGLMMPFVKKAPKVSFKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLW 355 (476)
Q Consensus 277 a~~g~~~~~~~~~~~~~~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~ 355 (476)
+|+++ ... ... ..+... ..|+++ +.|+++.++++|++++++++++.+..... .....++.....++.++
T Consensus 243 v~~g~-~~g-~~~-~~~~~~~~~di~s--~sK~l~~G~~~G~v~~~~~~~~~l~~~~~-----~~~~~~~t~~~n~~~~a 312 (453)
T 2cy8_A 243 VISGF-RVG-NHG-MQALLDVQPDLTC--LAKASAGGLPGGILGGREDVMGVLSRGSD-----RKVLHQGTFTGNPITAA 312 (453)
T ss_dssp TTTTT-TTC-TTH-HHHHHTCCCSEEE--EEGGGGTTSSCEEEEECHHHHTTSSSCC--------------CCCCHHHHH
T ss_pred Ccccc-ccC-chh-hhHHhCCCCcEEE--EChhhhCCcceEEEechHHHHHHhccccC-----CCceeCCCCCCCHHHHH
Confidence 99865 221 100 011011 257664 45999888999999999887765543100 00001111011234444
Q ss_pred HHHHHhCh-hcHHHHHHHHHHHHHHHHHHHHhc----CCeEeecCCeeEEEEecCC------------------c----H
Q 011842 356 YTLNRKGY-KGFQKEVQKCLRNAHYLKDRLLDA----GISAMLNELSSTVVFERPQ------------------D----E 408 (476)
Q Consensus 356 ~~l~~~g~-~g~~~~~~~~~~~a~~l~~~L~~~----g~~~~~~~~~~iv~f~~~~------------------~----~ 408 (476)
+++..+.. - .++..++..++++++++.|++. ++....++...++.+..+. + .
T Consensus 313 a~~aal~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (453)
T 2cy8_A 313 AAIAAIDTIL-EDDVCAKINDLGQFAREAMNHLFARKGLNWLAYGRFSGFHLMPGLPPNTTDTGSITRAEVARPDVKMIA 391 (453)
T ss_dssp HHHHHHHHHH-HTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCTTEEEEEETSCTTCCCCHHHHTTCSCCCCHHHHH
T ss_pred HHHHHHHHHh-hhhHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeeeEEEEEEeccccccccccccccccccccHHHHH
Confidence 33333321 1 2345677777888888888764 5433234444555555442 1 1
Q ss_pred HHh-----hceeecccCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhcCC
Q 011842 409 EFV-----RRWQLACQGNIAHVVVMPNVTIDKLDDFLNELIENRSTWYEDGK 455 (476)
Q Consensus 409 ~~~-----~~~~l~~~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~~~~~ 455 (476)
.+. +++.+... . |+.++..+|+++|++++++|+++.+++.++|.
T Consensus 392 ~l~~~l~~~Gv~v~~~-~--~~~l~~~~t~~~i~~~l~~l~~~l~~~~~~~~ 440 (453)
T 2cy8_A 392 AMRMALILEGVDIGGR-G--SVFLSAQHEREHVEHLVTTFDRVLDRLADENL 440 (453)
T ss_dssp HHHHHHHHTTEECBTT-T--EEECCTTCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHCCeEEeCC-C--CEEeeccCCHHHHHHHHHHHHHHHHHHHhCCC
Confidence 222 22233221 2 34456788999999999999999988877655
No 211
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.82 E-value=4.7e-18 Score=176.09 Aligned_cols=296 Identities=10% Similarity=0.011 Sum_probs=182.3
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhC------CCcEEEecCCCch-HHHHHHHHcCC-----
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVF------PDGILYASRESHY-SVFKAARMYRM----- 206 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~------p~~~Vl~s~~~H~-S~~~~~~~~G~----- 206 (476)
++..++++.++++++.+. ..+++|+|||+|+..++.+++... +++.|++.+++|. +...++...|.
T Consensus 93 ~~~~~l~~~la~~~~~~~--~~v~~~~ggsea~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~ 170 (449)
T 3a8u_X 93 PLSFQLAEKITDLTPGNL--NHVFFTDSGSECALTAVKMVRAYWRLKGQATKTKMIGRARGYHGVNIAGTSLGGVNGNRK 170 (449)
T ss_dssp HHHHHHHHHHHTTSSTTE--EEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCHHHHT
T ss_pred HHHHHHHHHHHHhCCCCC--CEEEEcCcHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCChhhhhccCChhhcc
Confidence 566678888888887653 359999999999999998876521 5677777666554 44445555442
Q ss_pred -------eEEEEeCCCCC-----ccC--------HHHHHHHHHcCC-CCcEEEEEeeCCCccccccC----HHHHHHHHH
Q 011842 207 -------ECVKVDCLISG-----EID--------CADFKAKLLQNK-DKPAIINVNIGTTVKGAVDD----LDLVIQTLE 261 (476)
Q Consensus 207 -------~v~~v~~~~~g-----~~D--------~~~Le~~l~~~~-~~p~~vv~t~gtt~tG~id~----l~~I~~ia~ 261 (476)
.+..++.+... .+| +++|+++|++.. .++.+|+++...+++|.+.| +++|.++|+
T Consensus 171 ~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~le~~l~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~ 250 (449)
T 3a8u_X 171 LFGQPMQDVDHLPHTLLASNAYSRGMPKEGGIALADELLKLIELHDASNIAAVFVEPLAGSAGVLVPPEGYLKRNREICN 250 (449)
T ss_dssp TTCCCSCSEEEECCCCCGGGTTCSSSCSSSHHHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHH
T ss_pred ccCCCCCCCeEecCCccccCccccCChHHHHHHHHHHHHHHHHhcCCCCEEEEEEcCccCCCCCccCCHHHHHHHHHHHH
Confidence 35556543211 246 999999997532 23346666655567998888 999999999
Q ss_pred HhCCCCCceEEEEecCcccccccccccCCCCCCcc-cccEEEEcCCCCCCCC-CCceeEEeehhhhhhhcCCccccCCCC
Q 011842 262 ESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKK-PIGSVSVSGHKFVGCP-MPCGVQITRMEHINVLSSNVEYLASRD 339 (476)
Q Consensus 262 ~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~-~~Dsi~~s~hK~l~~p-~~~G~l~~~~~~~~~l~~~~~yl~~~~ 339 (476)
+||+ ++++|++|.++.... ... .++... ..|++++ .|+++++ +++|++++++++++.+......-....
T Consensus 251 ~~~~-----~li~Dev~~~~g~~g-~~~-~~~~~~~~~di~s~--sK~l~~G~~~~G~~~~~~~~~~~l~~~~~~~~~~~ 321 (449)
T 3a8u_X 251 QHNI-----LLVFDEVITGFGRTG-SMF-GADSFGVTPDLMCI--AKQVTNGAIPMGAVIASTEIYQTFMNQPTPEYAVE 321 (449)
T ss_dssp HHTC-----EEEEECTTTTTTTTS-SSS-HHHHHTCCCSEEEE--CGGGGTTSSCCEEEEEEHHHHHHHHTCSSCTTSCS
T ss_pred HhCC-----EEEEeccccCccccC-cch-hhhhcCCCCCEEEE--cccccCCCCceEEEEECHHHHHHhhccCccccccc
Confidence 9999 999999996532111 100 011111 2576644 4988866 789999999887766543210000000
Q ss_pred CcccCCCCChhHHHHHH---HHHHhChhcHHHHHHHHHHHHHHHHHHHHhcC---CeEeecCCeeEEEEecCCc---H--
Q 011842 340 ATIMGSRNGHAPIFLWY---TLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAG---ISAMLNELSSTVVFERPQD---E-- 408 (476)
Q Consensus 340 ~~~~~sr~~~~~l~~~~---~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g---~~~~~~~~~~iv~f~~~~~---~-- 408 (476)
.....+-. ..++.+.+ +++.+.. ++..++..++.+++++.|++.+ .....++..+++.+..+.. .
T Consensus 322 ~~~~~t~~-~~~~~~aa~~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~ 397 (449)
T 3a8u_X 322 FPHGYTYS-AHPVACAAGLAALCLLQK---ENLVQSVAEVAPHFEKALHGIKGAKNVIDIRNFGLAGAIQIAPRDGDAIV 397 (449)
T ss_dssp SCCCCTTT-TCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHTTTTSTTEEEEEEETTEEEEEECCBTTBSSH
T ss_pred ccccCCCc-ccHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeeEEEEEEEEecCcccccc
Confidence 00011111 12333333 3333322 2467778888899999998743 2111222345555554421 1
Q ss_pred ---HHh-----hceeecccCCEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Q 011842 409 ---EFV-----RRWQLACQGNIAHVVVMPNVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 409 ---~~~-----~~~~l~~~~~~lRv~~~~~~T~edid~~~~~l~~~~~~ 449 (476)
++. +++.+...++.+|++++..+|+++|++++++|+++.++
T Consensus 398 ~~~~~~~~l~~~Gv~v~~~g~~iRis~~~~~t~~~i~~~l~~l~~~l~~ 446 (449)
T 3a8u_X 398 RPFEAGMALWKAGFYVRFGGDTLQFGPTFNSKPQDLDRLFDAVGEVLNK 446 (449)
T ss_dssp HHHHHHHHHHHHTEECEEETTEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHCCcEEecCCCEEEEECCCcCCHHHHHHHHHHHHHHHHH
Confidence 232 23333333488999988899999999999999988764
No 212
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.81 E-value=2e-18 Score=176.53 Aligned_cols=213 Identities=15% Similarity=0.096 Sum_probs=154.3
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHH-----HHcCCeEEEEeC
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAA-----RMYRMECVKVDC 213 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~-----~~~G~~v~~v~~ 213 (476)
....++.+.++++.|.+. .+++++|++|+.. +.... .+++.|+++++.|.+....+ +..|++++.++.
T Consensus 67 p~~~~l~~~la~l~g~~~----~~~~~sG~~Ai~~-~~~l~--~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~ 139 (400)
T 3nmy_A 67 PTRFAYERCVAALEGGTR----AFAFASGMAATST-VMELL--DAGSHVVAMDDLYGGTFRLFERVRRRTAGLDFSFVDL 139 (400)
T ss_dssp HHHHHHHHHHHHHHTCSE----EEEESSHHHHHHH-HHTTS--CTTCEEEEESSCCHHHHHHHHHTHHHHHCCEEEEECT
T ss_pred HHHHHHHHHHHHHhCCCC----EEEecCHHHHHHH-HHHHc--CCCCEEEEeCCCchHHHHHHHHhhHhhcCeEEEEECC
Confidence 445566677888888752 7788888998876 33333 38999999999998655443 335999999987
Q ss_pred CCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCC
Q 011842 214 LISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVS 293 (476)
Q Consensus 214 ~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~ 293 (476)
+ |+++|+++|.+++ .+|++.+++|++|.+.|+++|+++|++||+ ++++|++|+.+... .. +.
T Consensus 140 ~-----d~~~l~~~i~~~~---~~v~~e~~~np~G~~~~l~~i~~la~~~g~-----~livDe~~~~~~~~--~~---~~ 201 (400)
T 3nmy_A 140 T-----DPAAFKAAIRADT---KMVWIETPTNPMLKLVDIAAIAVIARKHGL-----LTVVDNTFASPMLQ--RP---LS 201 (400)
T ss_dssp T-----SHHHHHHHCCTTE---EEEEEESSCTTTCCCCCHHHHHHHHHHTTC-----EEEEECTTTHHHHC--CG---GG
T ss_pred C-----CHHHHHHHhccCC---CEEEEECCCCCCCeeecHHHHHHHHHHcCC-----EEEEECCCcccccC--Ch---hh
Confidence 6 8999999997654 488888999999999999999999999999 99999999754331 00 11
Q ss_pred CcccccEEEEcCCCCCCCC-CC-ce-eEEeeh-hhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhChhcHHHH
Q 011842 294 FKKPIGSVSVSGHKFVGCP-MP-CG-VQITRM-EHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKE 369 (476)
Q Consensus 294 ~~~~~Dsi~~s~hK~l~~p-~~-~G-~l~~~~-~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~ 369 (476)
..+|+++.|++|++++| .. .| ++++++ ++.+.+.....+. +.. ..++..|.+++.+ +.+..+
T Consensus 202 --~g~div~~S~sK~l~g~g~~~gG~~vv~~~~~~~~~l~~~~~~~--------g~~--~~~~~a~~~l~~l--~~l~~r 267 (400)
T 3nmy_A 202 --LGADLVVHSATKYLNGHSDMVGGIAVVGDNAELAEQMAFLQNSI--------GGV--QGPFDSFLALRGL--KTLPLR 267 (400)
T ss_dssp --GTCSEEEEETTTTTTCSSSCCCEEEEECSCHHHHHHHHHHHHHH--------CCB--CCHHHHHHHHHHH--TTHHHH
T ss_pred --cCCcEEEecCccccCCCCCcceeEEEEeCCHHHHHHHHHHHHhc--------CCC--CCHHHHHHHHHhH--hHHHHH
Confidence 24899999999999976 23 35 455544 3444442211111 111 2246666666644 567888
Q ss_pred HHHHHHHHHHHHHHHHhcCCe
Q 011842 370 VQKCLRNAHYLKDRLLDAGIS 390 (476)
Q Consensus 370 ~~~~~~~a~~l~~~L~~~g~~ 390 (476)
+++..++++++.+.|++.+..
T Consensus 268 ~~~~~~~a~~l~~~L~~~p~v 288 (400)
T 3nmy_A 268 MRAHCENALALAQWLETHPAI 288 (400)
T ss_dssp HHHHHHHHHHHHHHHTTCTTE
T ss_pred HHHHHHHHHHHHHHHHcCCCE
Confidence 899999999999999987654
No 213
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=99.81 E-value=1.8e-18 Score=177.18 Aligned_cols=297 Identities=12% Similarity=0.020 Sum_probs=189.4
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCcc--cEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeC
Q 011842 136 HSRQFEVGVLDWFARLWELENNEY--WGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDC 213 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~~~~~--~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~ 213 (476)
|..++++++.+|+.+..+...++. ++++|+|+++|+..++.+.....| +.|++++++|..+...++..|++++.+|+
T Consensus 73 G~~~lr~aia~~~~~~~~~~~~~~~i~i~~t~G~~~al~~~~~~l~~~~~-d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~ 151 (405)
T 3k7y_A 73 GTEDFSTLTQNLIFGNNSKYIEDKKICTIQCIGGTGAIFVLLEFLKMLNV-ETLYVTNPPYINHVNMIESRGFNLKYINF 151 (405)
T ss_dssp SCHHHHHHHHHHHHCSSCTTTTTTCEEEEEEEHHHHHHHHHHHHHHTTTC-CEEEEESSCCHHHHHHHHTTTCEEEEECC
T ss_pred CcHHHHHHHHHHHcCCCCccccccceEEEEcCchHHHHHHHHHHHHhcCC-CEEEEeCCCCHhHHHHHHHcCCeEEEEec
Confidence 456999999999866544332222 368999999999998887765457 99999999999999999999999999998
Q ss_pred -CC-CCccCHHHHHHHHHcCCCCcEEEEEeeC-CCccccccC---HHHHHHHHHHhCCCCCceEEEEecCcccccccccc
Q 011842 214 -LI-SGEIDCADFKAKLLQNKDKPAIINVNIG-TTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVK 287 (476)
Q Consensus 214 -~~-~g~~D~~~Le~~l~~~~~~p~~vv~t~g-tt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~ 287 (476)
++ ++.+|++.|++++.+..+ ..+++++.+ .|+||.+-+ +++|+++|++|++ |+++|++|..+......
T Consensus 152 ~~~~~~~~d~~~l~~~l~~~~~-~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~-----~vi~De~Y~~l~~~~~~ 225 (405)
T 3k7y_A 152 FDYNLIDINYDLFLNDLRNIPN-GSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKH-----VIIFDIAYQGFGHTNLE 225 (405)
T ss_dssp EETTTTEECHHHHHHHHHHSCS-SCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCC-----EEEEEESCTTTSSSSTT
T ss_pred cccccCCcCHHHHHHHHHhCCC-CeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCe-----EEEEecCcccccCCCcc
Confidence 33 578999999999986321 236667655 799999854 7788999999999 99999999876542111
Q ss_pred -c-CCCCCCc-cc-ccEEEEcCCCCCC-CCCCceeEEe--e-hhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHH
Q 011842 288 -K-APKVSFK-KP-IGSVSVSGHKFVG-CPMPCGVQIT--R-MEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLN 359 (476)
Q Consensus 288 -~-~~~~~~~-~~-~Dsi~~s~hK~l~-~p~~~G~l~~--~-~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~ 359 (476)
. .+...+. .. --++..|+.|.++ +++++|++++ . .++++.+......+.. .... +. ..+.+.++..
T Consensus 226 ~~~~~~~~~~~~~~~~i~~~S~SK~~~l~GlRiG~~~~~~~~~~~~~~~~~~l~~~~~--~~~~-~~---~~~~q~~~~~ 299 (405)
T 3k7y_A 226 EDVLLIRKFEEKNIAFSVCQSFSKNMSLYGERAGALHIVCKNQEEKKIVFNNLCFIVR--KFYS-SP---VIHTNRILCQ 299 (405)
T ss_dssp GGGHHHHHHHTTTCCEEEEEECTTTSCCTTTTEEEEEEECSSHHHHHHHHHHHHHHHH--TTTS-SC---CHHHHHHHHH
T ss_pred cchHHHHHHHhcCCcEEEEeeCCccCCCccccceEEEEEeCCHHHHHHHHHHHHHHHh--cccC-CC---cHHHHHHHHH
Confidence 0 0000000 11 1245677889876 8999999864 3 3333322110000000 0000 11 1233333332
Q ss_pred HhC--------hhcHHHHHHHHHHHHHHHHHHHH----hcCC---eEeecCCeeEEEEe-cCCcHHHhhce---eecccC
Q 011842 360 RKG--------YKGFQKEVQKCLRNAHYLKDRLL----DAGI---SAMLNELSSTVVFE-RPQDEEFVRRW---QLACQG 420 (476)
Q Consensus 360 ~~g--------~~g~~~~~~~~~~~a~~l~~~L~----~~g~---~~~~~~~~~iv~f~-~~~~~~~~~~~---~l~~~~ 420 (476)
.+. .+.++++.++..++++++.+.|+ +.|. ..+.++..+.++|. .+. ++...+ .+....
T Consensus 300 ~l~~~~l~~~~~~~l~~~~~~~~~~R~~l~~~L~~~~~~~g~~~~~~~~~p~gg~f~~~~l~~--~~~~~L~~~gV~v~p 377 (405)
T 3k7y_A 300 LLNNQNLKLNWIKELSQLSQRITNNRILFFNKLETYQKKYNLNYDWNVYKKQRGLFSFVPLLA--KIAEHLKTHHIYIIN 377 (405)
T ss_dssp HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCGGGGSSCCSSEEECGGGG--GGTTTTTTTTEECCT
T ss_pred HhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCccccCCceEEEecCCCH--HHHHHHHHCCEeecC
Confidence 221 12345556777889999999999 7763 23344555444443 322 223222 111111
Q ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Q 011842 421 NIAHVVVMPNVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 421 ~~lRv~~~~~~T~edid~~~~~l~~~~~~ 449 (476)
+ -|+++. ..++++|+.++++|.++.++
T Consensus 378 ~-~Ris~a-~~~~~~i~~~~~~i~~~~~~ 404 (405)
T 3k7y_A 378 N-GRINVS-GITKNNVDYIADKICLSLSQ 404 (405)
T ss_dssp T-SEEEGG-GCCTTHHHHHHHHHHHHHHC
T ss_pred C-CeEEEe-ccCHHHHHHHHHHHHHHHhh
Confidence 1 187664 45789999999999988764
No 214
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.81 E-value=3.6e-18 Score=175.93 Aligned_cols=280 Identities=15% Similarity=0.063 Sum_probs=166.5
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCch-HHHHHHHHcCC-----------
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHY-SVFKAARMYRM----------- 206 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~-S~~~~~~~~G~----------- 206 (476)
+...++.++++++++ .. ..++||+|||+|+..++.+++...+++.|++.+..|+ +...+....+.
T Consensus 93 ~~~~~la~~l~~~~~-~~--~~v~~~~sGsea~~~al~~a~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~ 169 (429)
T 4e77_A 93 EMEVKMAQLVTDLVP-TM--DMVRMVNSGTEATMSAIRLARGYTGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSP 169 (429)
T ss_dssp HHHHHHHHHHHHHST-TC--SEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCC------------------CCCT
T ss_pred HHHHHHHHHHHhhCC-CC--CEEEEeCcHHHHHHHHHHHHHHhhCCCEEEEEcCccCCCChhhhhhcCCcccccCCCCcC
Confidence 566677788888886 32 3499999999999999998775434555655555543 33322211111
Q ss_pred --------eEEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC----HHHHHHHHHHhCCCCCceEEEE
Q 011842 207 --------ECVKVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD----LDLVIQTLEESGFTQDRFYIHC 274 (476)
Q Consensus 207 --------~v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~----l~~I~~ia~~~g~~~~~~~lhv 274 (476)
.+..++.+ |+++|++++++....+.+|+++...+..|.+.| +++|.++|++||+ ++|+
T Consensus 170 ~~~~~~~~~~~~~~~~-----d~~~le~~l~~~~~~~~~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~-----lli~ 239 (429)
T 4e77_A 170 GVPTDFAKHTLTCTYN-----DLASVRQAFEQYPQEVACIIVEPVAGNMNCIPPLPEFLPGLRALCDEFGA-----LLII 239 (429)
T ss_dssp TSCGGGGTTEEEECTT-----CHHHHHHHHHHSTTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTC-----EEEE
T ss_pred CCCCccCCceeecCCC-----CHHHHHHHHHhcCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCC-----EEEE
Confidence 22333332 899999999875444456666555666788877 9999999999999 9999
Q ss_pred ecCcccccccccccCCCCCCcc-cccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHH
Q 011842 275 DGALFGLMMPFVKKAPKVSFKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIF 353 (476)
Q Consensus 275 D~a~~g~~~~~~~~~~~~~~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~ 353 (476)
|++|+++ ....... .+... ..|.++++ |.+++++++|+++.++++++.+....... .++.....++.
T Consensus 240 DEv~~g~-r~g~~~~--~~~~~~~pdi~t~s--K~~~~G~~~G~~~~~~~~~~~l~~~~~~~-------~~~t~~~~~~~ 307 (429)
T 4e77_A 240 DEVMTGF-RVALAGA--QDYYHVIPDLTCLG--KIIGGGMPVGAFGGRREVMNALAPTGPVY-------QAGTLSGNPIA 307 (429)
T ss_dssp EETTTBT-TTBTTCH--HHHTTCCCSEEEEE--GGGGTTSCCEEEEECHHHHTTBTTTSSBC-------C--CCCCCHHH
T ss_pred eccccCc-ccCcchH--HHhcCCCCCeeeec--ccccCCCCeEEEEECHHHHHHhccCCCcc-------ccCCCCCCHHH
Confidence 9999865 3211100 01011 24766554 98888899999999988876654321111 11111112344
Q ss_pred HHHH---HHHhChhcHHHHHHHHHHHHHHHHHHHHhc----CCeEeecCCeeEEEEecCCc-----------------HH
Q 011842 354 LWYT---LNRKGYKGFQKEVQKCLRNAHYLKDRLLDA----GISAMLNELSSTVVFERPQD-----------------EE 409 (476)
Q Consensus 354 ~~~~---l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----g~~~~~~~~~~iv~f~~~~~-----------------~~ 409 (476)
++++ ++.+.. ++.+++..++.+++++.|++. ++....+...+++.+..+.+ ..
T Consensus 308 ~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (429)
T 4e77_A 308 MAAGFACLTEISQ---VGVYETLTELTDSLATGLRHAAKEENIPLVVNHVGGMFGLFFTNADTVTCYQDVMNCDVERFKR 384 (429)
T ss_dssp HHHHHHHHHHHTS---TTHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEECCSSSCCCSHHHHHTSCHHHHHH
T ss_pred HHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeEEEEEEccCcccccccccccccHHHHHH
Confidence 4433 443322 345666666777777777653 54333333344555554332 22
Q ss_pred Hh-----hceeecc-cCCEEEEEEcCCCCHHHHHHHHHHHHHHHH
Q 011842 410 FV-----RRWQLAC-QGNIAHVVVMPNVTIDKLDDFLNELIENRS 448 (476)
Q Consensus 410 ~~-----~~~~l~~-~~~~lRv~~~~~~T~edid~~~~~l~~~~~ 448 (476)
+. ++..+.. ... |++++..+|++||++++++|+++.+
T Consensus 385 ~~~~l~~~Gi~v~~~~~~--~~~~~~~~t~e~i~~~l~~l~~~l~ 427 (429)
T 4e77_A 385 FFHLMLEEGVYLAPSAFE--AGFMSLAHSNEDIQKTVNAARRCFA 427 (429)
T ss_dssp HHHHHHHTTEECCSSTTS--CEECCTTCCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHCCeEEeecCCC--CEEEeccCCHHHHHHHHHHHHHHHH
Confidence 22 2222222 223 4445678899999999999998764
No 215
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.81 E-value=7.3e-19 Score=181.40 Aligned_cols=239 Identities=11% Similarity=0.038 Sum_probs=170.1
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecC-CCchHHHHHHH----------HcCCe
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASR-ESHYSVFKAAR----------MYRME 207 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~-~~H~S~~~~~~----------~~G~~ 207 (476)
..++++.+++++++|.+..... +++++||+||..++.+... |++.|++++ +.|.++...++ ..|++
T Consensus 65 ~~~~~l~~~la~~~g~~~~~~~-i~~~sGt~Ai~~al~al~~--~Gd~Vl~~~~~~y~~~~~~~~l~g~~~~~~~~~G~~ 141 (431)
T 3ht4_A 65 IGRDTLEKVYADVFGAEAGLVR-PQIISGTHAISTALFGILR--PGDELLYITGKPYDTLEEIVGVRGKGVGSFKEYNIG 141 (431)
T ss_dssp HHHHHHHHHHHHHTTCSEECCB-TTSCSHHHHHHHHHHTTCC--TTCEEEECSSSCCTTHHHHTTSSSCSSSCSGGGTCE
T ss_pred hhHHHHHHHHHHHhCCCccccc-ceeeCHHHHHHHHHHHhCC--CCCEEEEeCCCCchhHHHHHhhcccccchHHHcCCE
Confidence 3477888899999999753211 1245889999999877655 899999998 89998886664 36999
Q ss_pred EEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEee----CCCccccccCHHHHHHHHHH--hCCCCCceEEEEecCcccc
Q 011842 208 CVKVDCLISGEIDCADFKAKLLQNKDKPAIINVNI----GTTVKGAVDDLDLVIQTLEE--SGFTQDRFYIHCDGALFGL 281 (476)
Q Consensus 208 v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~----gtt~tG~id~l~~I~~ia~~--~g~~~~~~~lhvD~a~~g~ 281 (476)
++.++.++++.+|+++|+++|++++ .+|+++. +++++|.+.++++|+++|++ ||+ ++++|++|+.+
T Consensus 142 ~~~v~~~~~~~~d~e~l~~~l~~~t---k~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~-----~livDea~~~~ 213 (431)
T 3ht4_A 142 YNAVPLTEGGLVDFEAVAAAIHSNT---KMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDV-----VVFVDNCYGEF 213 (431)
T ss_dssp EEECCBCTTSSBCHHHHHHHCCTTE---EEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTC-----EEEEECTTCTT
T ss_pred EEEeCCCCCCCcCHHHHHhhcCCCC---eEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCC-----EEEEeCCChhh
Confidence 9999998889999999999997654 4777776 78889999999999999999 999 99999999876
Q ss_pred cccccccCCCCCCcccccEEEEcCCCCCCC---CCCceeEEeehhhhhhhcC--CccccCCCCCcccCCCCChhHHHHHH
Q 011842 282 MMPFVKKAPKVSFKKPIGSVSVSGHKFVGC---PMPCGVQITRMEHINVLSS--NVEYLASRDATIMGSRNGHAPIFLWY 356 (476)
Q Consensus 282 ~~~~~~~~~~~~~~~~~Dsi~~s~hK~l~~---p~~~G~l~~~~~~~~~l~~--~~~yl~~~~~~~~~sr~~~~~l~~~~ 356 (476)
..... . .. ..+|+++.|+||++++ |.+ |+++.++++++.+.. ....+.. . .+..... .|.
T Consensus 214 ~~~~~-~---~~--~g~Di~~~S~sK~lgg~~~~~G-G~v~~~~~li~~l~~~~~~~~~g~---~-~~~~~~~----~~~ 278 (431)
T 3ht4_A 214 IEEQE-P---CH--VGADLMAGSLIKNPGGGIVKTG-GYIVGKEQYVEACAYRLTSPGIGA---E-AGASLYS----LQE 278 (431)
T ss_dssp SSSCC-G---GG--TTCSEEEEETTSGGGTTTCSSC-EEEEECHHHHHHHHHHHSCTTTTT---S-CSCCCSC----SHH
T ss_pred ccCCC-c---cc--cCCeEEEcCccccCCCCCCCce-EEEEecHHHHHHHHHHhccCCccc---c-cCccHHH----HHH
Confidence 54211 1 11 1379999999999765 444 999998887665532 1111110 0 1111110 111
Q ss_pred HHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCee-----EEEEecCC
Q 011842 357 TLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSS-----TVVFERPQ 406 (476)
Q Consensus 357 ~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~-----iv~f~~~~ 406 (476)
+++. ...+..++++..++++++.+.|++.|+.+ .+..+. ++.+..++
T Consensus 279 ~~~~--l~~~~~~~~~~~~~a~~l~~~L~~~g~~v-~p~~~~~~~~li~~i~l~~ 330 (431)
T 3ht4_A 279 MYQG--FFLAPHVAGQALKGAIFTAAFLEKLGMNT-SPAWNAPRTDLIQSVQFDD 330 (431)
T ss_dssp HHHH--HHHHHHHHHHHHHHHHHHHHHHHHHTCCE-ESCTTSCCSSSCCEEECCC
T ss_pred HHhH--hhhHHHHHHHHHHHHHHHHHHHHhCcCEe-cCCCCCCCccEEEEEEeCC
Confidence 2221 23456788889999999999999999865 332222 56666654
No 216
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.81 E-value=9.8e-18 Score=175.36 Aligned_cols=297 Identities=10% Similarity=-0.029 Sum_probs=187.0
Q ss_pred HHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhh------CCCcEEEecCCCchHHHHHHHHc-CC----
Q 011842 138 RQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREV------FPDGILYASRESHYSVFKAARMY-RM---- 206 (476)
Q Consensus 138 ~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~------~p~~~Vl~s~~~H~S~~~~~~~~-G~---- 206 (476)
.+...++.++++++++.+.+ .++||+||++||..|+.+++.. ..++.|++.+.+|......+..+ |.
T Consensus 96 ~~~~~~la~~l~~~~~~~~~--~v~~~~sGseA~~~Aik~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~ 173 (476)
T 3i5t_A 96 TSPAARLAEKIATLTPGDLN--RIFFTTGGSTAVDSALRFSEFYNNVLGRPQKKRIIVRYDGYHGSTALTAACTGRTGNW 173 (476)
T ss_dssp CHHHHHHHHHHHTTSSTTCC--EEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHTCCCGGGC
T ss_pred CHHHHHHHHHHHhcCCCCcC--EEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCcCcCChhhccccCChhhc
Confidence 37778899999999875543 4999999999999999999864 23556666666654433333222 21
Q ss_pred --------eEEEEeCCC--CC-ccC--------HHHHHHHHHcCC-CCcEEEEEeeCCCccccccC----HHHHHHHHHH
Q 011842 207 --------ECVKVDCLI--SG-EID--------CADFKAKLLQNK-DKPAIINVNIGTTVKGAVDD----LDLVIQTLEE 262 (476)
Q Consensus 207 --------~v~~v~~~~--~g-~~D--------~~~Le~~l~~~~-~~p~~vv~t~gtt~tG~id~----l~~I~~ia~~ 262 (476)
.+..++... .. ..| +++|+++|.+.. ..+.+|+++...++.|.+.+ +++|.++|++
T Consensus 174 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~ 253 (476)
T 3i5t_A 174 PNFDIAQDRISFLSSPNPRHAGNRSQEAFLDDLVQEFEDRIESLGPDTIAAFLAEPILASGGVIIPPAGYHARFKAICEK 253 (476)
T ss_dssp TTSCCCCTTEEEECCCCGGGCTTSCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHH
T ss_pred cccCCCCCCcEEeCCCcccccCCCchHHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHH
Confidence 233444221 11 112 789999997532 33457777777888887665 9999999999
Q ss_pred hCCCCCceEEEEecCcccccccccccC-C-CCCCcccccEEEEcCCCCCCCC-CCceeEEeehhhhhhhcCCc----ccc
Q 011842 263 SGFTQDRFYIHCDGALFGLMMPFVKKA-P-KVSFKKPIGSVSVSGHKFVGCP-MPCGVQITRMEHINVLSSNV----EYL 335 (476)
Q Consensus 263 ~g~~~~~~~lhvD~a~~g~~~~~~~~~-~-~~~~~~~~Dsi~~s~hK~l~~p-~~~G~l~~~~~~~~~l~~~~----~yl 335 (476)
||+ ++++|++|.++........ . .+. ...|+++++ |.++.+ +++|++++++++++.+.... .+.
T Consensus 254 ~gi-----llI~DEv~~g~gr~G~~~~~~~~~~--v~pdi~t~s--K~l~~G~~plg~v~~~~~i~~~~~~~~~~~~~~~ 324 (476)
T 3i5t_A 254 HDI-----LYISDEVVTGFGRCGEWFASEKVFG--VVPDIITFA--KGVTSGYVPLGGLAISEAVLARISGENAKGSWFT 324 (476)
T ss_dssp TTC-----EEEEECTTTTTTTTSSSCHHHHTTC--CCCSEEEEC--GGGGTTSSCCEEEEECHHHHHTTSGGGCTTCEEC
T ss_pred cCC-----EEEEEecccCCccccCceeeecccC--CCcchhhhh--hhhcCCCcCeEEEEECHHHHHHHhcCCccccccc
Confidence 999 9999999986532211000 0 111 125777765 999888 89999999998877664321 111
Q ss_pred CCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcC---CeEeecCCeeEEEEecCCc-----
Q 011842 336 ASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAG---ISAMLNELSSTVVFERPQD----- 407 (476)
Q Consensus 336 ~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g---~~~~~~~~~~iv~f~~~~~----- 407 (476)
.. .++. ..++.+.+++..+..-.-++.+++..++.+++++.|++.+ ......+...++.+....+
T Consensus 325 ~~--~t~~-----~np~a~aAa~aaL~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~v~~v~~~G~~~~i~~~~~~~~~~ 397 (476)
T 3i5t_A 325 NG--YTYS-----NQPVACAAALANIELMEREGIVDQAREMADYFAAALASLRDLPGVAETRSVGLVGCVQCLLDPTRAD 397 (476)
T ss_dssp CC--CTTT-----TCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTTTTSTTEEEEEEETTEEEEEECCC-----
T ss_pred cc--CCCC-----cCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCceeEEEEecCccccc
Confidence 10 1111 1245555555444211114567777888888999888653 2222223333444443221
Q ss_pred ---------HHH-----hhceeecccCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHh
Q 011842 408 ---------EEF-----VRRWQLACQGNIAHVVVMPNVTIDKLDDFLNELIENRSTWYE 452 (476)
Q Consensus 408 ---------~~~-----~~~~~l~~~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~~ 452 (476)
..+ .+++.+...++.+|+++...+|+++|++++++|+++.+++.+
T Consensus 398 ~~~~~~~~~~~~~~~l~~~Gv~v~~~g~~iRi~p~l~~t~e~i~~~l~~l~~~l~~~~~ 456 (476)
T 3i5t_A 398 GTAEDKAFTLKIDERCFELGLIVRPLGDLCVISPPLIISRAQIDEMVAIMRQAITEVSA 456 (476)
T ss_dssp CCHHHHHHHHHHHHHHHHTTEECEEETTEEEECCCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cccchhHHHHHHHHHHHHCCCEEEecCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 111 123333334588999888889999999999999999887754
No 217
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.80 E-value=2.4e-18 Score=177.26 Aligned_cols=283 Identities=13% Similarity=0.049 Sum_probs=176.2
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCch-HHHHHHHHcCC-----------
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHY-SVFKAARMYRM----------- 206 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~-S~~~~~~~~G~----------- 206 (476)
....+++++++++++ +. ..++||+|||+||..++.+++...+++.|++.+.+|. +...+....|.
T Consensus 93 ~~~~~l~~~la~~~~-~~--~~v~~~~~Gsea~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~ 169 (429)
T 3k28_A 93 EIENKLAKLVIERVP-SI--EIVRMVNSGTEATMSALRLARGYTGRNKILKFIGCYHGHGDSLLIKAGSGVATLGLPDSP 169 (429)
T ss_dssp HHHHHHHHHHHHHST-TC--SEEEEESSHHHHHHHHHHHHHHHHTCCEEEEEETCCCCSCGGGCSSCCTTC-----CCCT
T ss_pred HHHHHHHHHHHHhCC-CC--CEEEEeCChHHHHHHHHHHHHHhhCCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCcC
Confidence 445566677888775 22 3499999999999999998876435566666555543 33222222222
Q ss_pred --------eEEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC----HHHHHHHHHHhCCCCCceEEEE
Q 011842 207 --------ECVKVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD----LDLVIQTLEESGFTQDRFYIHC 274 (476)
Q Consensus 207 --------~v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~----l~~I~~ia~~~g~~~~~~~lhv 274 (476)
+++.+|.+ |+++|++++++....+.+|+++...+++|.+.| +++|.++|++||+ ++|+
T Consensus 170 ~~~~~~~~~~~~~~~~-----d~~~le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~-----~li~ 239 (429)
T 3k28_A 170 GVPEGVAKNTITVAYN-----DLESVKYAFEQFGDDIACVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGA-----LLIF 239 (429)
T ss_dssp TCCHHHHTTEEEEETT-----CHHHHHHHHHHHGGGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTC-----EEEE
T ss_pred CCCCcccCceeecCCC-----CHHHHHHHHHhCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCC-----EEEE
Confidence 23334433 899999999854334457777766777888888 9999999999999 9999
Q ss_pred ecCcccccccccccCCCCCCcc-cccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHH
Q 011842 275 DGALFGLMMPFVKKAPKVSFKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIF 353 (476)
Q Consensus 275 D~a~~g~~~~~~~~~~~~~~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~ 353 (476)
|++|.++ ....... .+... ..|.++++ |.++.++++|++++++++++.+....... .++.....++.
T Consensus 240 DEv~~g~-~~g~~~~--~~~~~~~~di~t~s--K~~~~G~~iG~~~~~~~~~~~~~~~~~~~-------~~~t~~~~~~a 307 (429)
T 3k28_A 240 DEVMTGF-RVAYNCG--QGYYGVTPDLTCLG--KVIGGGLPVGAYGGKAEIMRQVAPSGPIY-------QAGTLSGNPLA 307 (429)
T ss_dssp ECTTTTT-TSSTTHH--HHHHTCCCSEEEEC--GGGGTTSCCEEEEECHHHHTTBTTTSSBC-------CCCTTTTCHHH
T ss_pred ecccccc-ccCcchH--HHHhCCCCceehhh--hhhcCCCCeEEEEEcHHHHhhhccCCCcc-------ccCCCCCChHH
Confidence 9999765 3211000 00011 25666654 88888899999999988876654321111 11111122455
Q ss_pred HHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhc----CCeEeecCCeeEEEEecCC------------c----HHHh--
Q 011842 354 LWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDA----GISAMLNELSSTVVFERPQ------------D----EEFV-- 411 (476)
Q Consensus 354 ~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----g~~~~~~~~~~iv~f~~~~------------~----~~~~-- 411 (476)
+.+++..+.... ++.+++..++++++++.|++. +.....+...+++.|.... + ..+.
T Consensus 308 ~aaa~aal~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (429)
T 3k28_A 308 MAAGYETLVQLT-PESYVEFERKAEMLEAGLRKAAEKHGIPHHINRAGSMIGIFFTDEPVINYDAAKSSNLQFFAAYYRE 386 (429)
T ss_dssp HHHHHHHHHTCC-HHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhCCCCEEEEeeccEEEEEEecCCcccccccccccHHHHHHHHHH
Confidence 555555543222 678888888889998888774 4322223333444444321 0 1121
Q ss_pred ---hceee-cccCCEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Q 011842 412 ---RRWQL-ACQGNIAHVVVMPNVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 412 ---~~~~l-~~~~~~lRv~~~~~~T~edid~~~~~l~~~~~~ 449 (476)
++..+ +...+.+|+ +..+|++++++++++|+++.++
T Consensus 387 l~~~Gv~v~~~~~~~~r~--~~~~t~e~i~~~l~~l~~~l~~ 426 (429)
T 3k28_A 387 MVEQGVFLPPSQFEGLFL--STVHSDADIEATIAAAEIAMSK 426 (429)
T ss_dssp HHHTTEECCSSTTSCBCC--CTTCCHHHHHHHHHHHHHHHHT
T ss_pred HHHCCeEEecCCCCCEEE--ECCCCHHHHHHHHHHHHHHHHH
Confidence 22333 223455665 5678999999999999988764
No 218
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.80 E-value=1.1e-17 Score=174.17 Aligned_cols=295 Identities=9% Similarity=-0.013 Sum_probs=178.4
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhh------CCCcEEEecCCCchHHH-HHHHHcC------
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREV------FPDGILYASRESHYSVF-KAARMYR------ 205 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~------~p~~~Vl~s~~~H~S~~-~~~~~~G------ 205 (476)
+...++.++++++++.+. ..++||+||++||..++.+++.. -+++.|++.+.+|+... .+....|
T Consensus 95 ~~~~~la~~l~~~~~~~~--~~v~~~~gGseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~ 172 (460)
T 3gju_A 95 EASITLAKMIIDRAPKGM--SRVYFGLSGSDANETNIKLIWYYNNVLGRPEKKKIISRWRGYHGSGVMTGSLTGLDLFHN 172 (460)
T ss_dssp HHHHHHHHHHHHHSCTTE--EEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCGGGTT
T ss_pred HHHHHHHHHHHhhCCCCc--CEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHhhccCCccccc
Confidence 677788889999876553 35999999999999999998853 24567777666654433 3322222
Q ss_pred ------CeEEEEeCCC-----CCccC--------HHHHHHHHHcCC-CCcEEEEEeeCCCccccccC----HHHHHHHHH
Q 011842 206 ------MECVKVDCLI-----SGEID--------CADFKAKLLQNK-DKPAIINVNIGTTVKGAVDD----LDLVIQTLE 261 (476)
Q Consensus 206 ------~~v~~v~~~~-----~g~~D--------~~~Le~~l~~~~-~~p~~vv~t~gtt~tG~id~----l~~I~~ia~ 261 (476)
..+..++... +..++ +++|+++|++.. +.+.+|+++...+++|.+.+ +++|.++|+
T Consensus 173 ~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~le~~i~~~~~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~ 252 (460)
T 3gju_A 173 AFDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQHCADKLEEMILAEGPETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLK 252 (460)
T ss_dssp TTTCSCTTEEEECCCCGGGCSCTTCCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHH
T ss_pred ccCCCCCCCEEeCCCccccCCccccChhHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHH
Confidence 1355565321 11233 689999987422 23457777766777888766 999999999
Q ss_pred HhCCCCCceEEEEecCcccccccccccCCCCCCcc-cccEEEEcCCCCCCCC-CCceeEEeehhhhhhhcCC----cccc
Q 011842 262 ESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKK-PIGSVSVSGHKFVGCP-MPCGVQITRMEHINVLSSN----VEYL 335 (476)
Q Consensus 262 ~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~-~~Dsi~~s~hK~l~~p-~~~G~l~~~~~~~~~l~~~----~~yl 335 (476)
+||+ ++++|++|.++........ .+... ..|+++++ |.++.+ +++|++++++++++.+... ..+.
T Consensus 253 ~~~~-----llI~DEv~~g~gr~g~~~~--~~~~~~~pdi~t~s--K~l~gG~~~lg~v~~~~~i~~~~~~~~~~~~~~~ 323 (460)
T 3gju_A 253 KYDV-----LLVADEVVTGFGRLGTMFG--SDHYGIKPDLITIA--KGLTSAYAPLSGVIVADRVWQVLVQGSDKLGSLG 323 (460)
T ss_dssp HTTC-----EEEEECTTTTTTTTSSSCH--HHHHTCCCSEEEEC--GGGTTTSSCCEEEEEEHHHHHHHHHHHHHHCSCS
T ss_pred HcCC-----EEEEeccccCCCcccccch--HhhcCCCCCeeeee--hhhcCCCCCeEEEEECHHHHHHHhcccccccccc
Confidence 9999 9999999986532110000 01011 25777655 998877 7999999999877666311 1111
Q ss_pred CCCCCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHH----HhcCCeEeecCCeeEEEEecCCc----
Q 011842 336 ASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRL----LDAGISAMLNELSSTVVFERPQD---- 407 (476)
Q Consensus 336 ~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L----~~~g~~~~~~~~~~iv~f~~~~~---- 407 (476)
. ..++.+ .++.+.+++..+..-.-++.+++..++.+++++.| ++.+......+...++.+....+
T Consensus 324 ~--~~t~~~-----~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~ 396 (460)
T 3gju_A 324 H--GWTYSA-----HPICVAAGVANLELIDEMDLVTNAGETGAYFRAELAKAVGGHKNVGEVRGDGMLAAVEFVADKDDR 396 (460)
T ss_dssp C--CCTTTT-----CHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEETTEEEEEECSBTTTT
T ss_pred c--CCCCCC-----CHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeeeEEEEEEEccCcccc
Confidence 0 011111 23444444444321111234455555555555555 44444333333334444443211
Q ss_pred ----------HHHh-----hceeeccc--CCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 011842 408 ----------EEFV-----RRWQLACQ--GNIAHVVVMPNVTIDKLDDFLNELIENRSTWY 451 (476)
Q Consensus 408 ----------~~~~-----~~~~l~~~--~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~ 451 (476)
..+. ++..+... .+.+|++++..+|+++|++++++|+++.++..
T Consensus 397 ~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 457 (460)
T 3gju_A 397 VFFDASQKIGPQVATALAASGVIGRAMPQGDILGFAPPLCLTREQADIVVSKTADAVKSVF 457 (460)
T ss_dssp BCCCGGGCHHHHHHHHHHHTTEECEECSSSCEEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred ccccchHHHHHHHHHHHHHCCeEEecCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 1111 23333322 38899988889999999999999999987754
No 219
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.80 E-value=5.6e-18 Score=175.85 Aligned_cols=290 Identities=9% Similarity=-0.009 Sum_probs=180.2
Q ss_pred HHHHHHHHHHHHHcC-CCCCcccEEEcCCchhHHHHHHHHHHhhC-----------C-CcEEEecCCCchHHHH-HHHH-
Q 011842 139 QFEVGVLDWFARLWE-LENNEYWGYITNCGTEGNLHGILVGREVF-----------P-DGILYASRESHYSVFK-AARM- 203 (476)
Q Consensus 139 ~le~~~~~~la~l~g-~~~~~~~g~~t~ggt~An~~al~aa~~~~-----------p-~~~Vl~s~~~H~S~~~-~~~~- 203 (476)
+...++.+.++++++ .+. ..++||+|||+||..++.+++... | ++.|++.+++|..... +...
T Consensus 101 ~~~~~la~~la~~~~~~~~--~~v~~~~~gseA~~~aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~~~ 178 (449)
T 2cjg_A 101 VAMARFVETFARVLGDPAL--PHLFFVEGGALAVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLT 178 (449)
T ss_dssp HHHHHHHHHHHHHHCCTTC--CEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGGGTC
T ss_pred HHHHHHHHHHHHhcCCCCC--CEEEEeCchHHHHHHHHHHHHHHhcccccccccccCCCCEEEEECCCcCCcccchhhhc
Confidence 455667777888886 332 359999999999999998776311 2 7788888876644322 1111
Q ss_pred -------cCC-----eEEEEeCCC--CC--------ccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC----HHHHH
Q 011842 204 -------YRM-----ECVKVDCLI--SG--------EIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD----LDLVI 257 (476)
Q Consensus 204 -------~G~-----~v~~v~~~~--~g--------~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~----l~~I~ 257 (476)
.+. +++.+|.+. .. ..|+++|+++|.+.+.++.+|+++...+++|.+.+ +++|.
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~ 258 (449)
T 2cjg_A 179 NTKPTITARFPKFDWPRIDAPYMRPGLDEPAMAALEAEALRQARAAFETRPHDIACFVAEPIQGEGGDRHFRPEFFAAMR 258 (449)
T ss_dssp CSCHHHHTTSCCCCCCEECCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHSTTTEEEEEECSEETTTTCEECCHHHHHHHH
T ss_pred CCchhhcccCCCCCCCcEEEcCCCchhhccccchhhHHHHHHHHHHHHhcCCceEEEEEeCcCCCCCCccCCHHHHHHHH
Confidence 122 566677653 11 36778899999754334457777665788998777 99999
Q ss_pred HHHHHhCCCCCceEEEEecCcccccccccccCCCCCCcc-cccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccC
Q 011842 258 QTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLA 336 (476)
Q Consensus 258 ~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~ 336 (476)
++|++||+ ++++|++|+++.... ... .+.... ..|+++++ |++ ++|++++++++++.+... ++.
T Consensus 259 ~l~~~~g~-----lli~DEv~~g~g~~g-~~~-~~~~~~~~~di~t~s--K~l----~iG~~~~~~~~~~~l~~~--~~~ 323 (449)
T 2cjg_A 259 ELCDEFDA-----LLIFDEVQTGCGLTG-TAW-AYQQLDVAPDIVAFG--KKT----QVCGVMAGRRVDEVADNV--FAV 323 (449)
T ss_dssp HHHHHTTC-----EEEEECTTTTTTTTS-SSS-THHHHTCCCSEEEEC--GGG----SSEEEEECGGGGGSTTCT--TTS
T ss_pred HHHHHCCc-----EEEEeccccCCCccC-cce-eecccCCCceEEEec--Ccc----cEEEEEECHHHhhhhhhc--ccC
Confidence 99999999 999999998643221 110 011111 25777654 887 589999998876543210 110
Q ss_pred C--CCCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhc----CC-eEeecCCeeEEEEecCCc--
Q 011842 337 S--RDATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDA----GI-SAMLNELSSTVVFERPQD-- 407 (476)
Q Consensus 337 ~--~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----g~-~~~~~~~~~iv~f~~~~~-- 407 (476)
. ...++.+ ..+.+.+++..+..-.-++..++..++++++++.|++. +. .....+..+++.+..+..
T Consensus 324 ~~~~~~t~~~-----n~~~~~aa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~ 398 (449)
T 2cjg_A 324 PSRLNSTWGG-----NLTDMVRARRILEVIEAEGLFERAVQHGKYLRARLDELAADFPAVVLDPRGRGLMCAFSLPTTAD 398 (449)
T ss_dssp TTSSCCSSSS-----CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHSTTTSEEEEEETTEEEEECSSHHH
T ss_pred CcccccCCCC-----CHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEeeccEEEEEEECChHH
Confidence 0 0011211 23444444333311001346677788889999998864 32 222333445666766542
Q ss_pred -HHHh-----hceee-cccCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 011842 408 -EEFV-----RRWQL-ACQGNIAHVVVMPNVTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 408 -~~~~-----~~~~l-~~~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~ 450 (476)
.++. +++.+ +...+.+|++++..+|+++|+++++.|+++.+++
T Consensus 399 ~~~~~~~l~~~Gv~v~~~g~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~ 448 (449)
T 2cjg_A 399 RDELIRQLWQRAVIVLPAGADTVRFRPPLTVSTAEIDAAIAAVRSALPVV 448 (449)
T ss_dssp HHHHHHHHHHTTEECEEETTTEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCeEEecCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence 2222 23333 2335799999999999999999999999887653
No 220
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.80 E-value=7.5e-18 Score=176.01 Aligned_cols=293 Identities=11% Similarity=0.070 Sum_probs=182.3
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhh------CCCcEEEecCCCchHHH-HHHHHcCC-----
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREV------FPDGILYASRESHYSVF-KAARMYRM----- 206 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~------~p~~~Vl~s~~~H~S~~-~~~~~~G~----- 206 (476)
+...++.++++++++.+.+ .++|++||++||..|+.+++.. -+++.|++.+.+|.... .+....|.
T Consensus 99 ~~~~~lae~l~~~~~~~~~--~v~~~~sGseA~~~aik~a~~~~~~~g~~~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~ 176 (472)
T 3hmu_A 99 VPAIALAQKLAELAPGDLN--HVFFAGGGSEANDTNIRMVRTYWQNKGQPEKTVIISRKNAYHGSTVASSALGGMAGMHA 176 (472)
T ss_dssp HHHHHHHHHHHHHSCTTEE--EEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCC--EEEEeCCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCcCCCccHHhhhccCChhhcc
Confidence 6677788889998866433 4999999999999999999863 13556666665554332 22222221
Q ss_pred ------eEEEEeCCC-----CCccC--------HHHHHHHHHcCC-CCcEEEEEeeCCCccccccC----HHHHHHHHHH
Q 011842 207 ------ECVKVDCLI-----SGEID--------CADFKAKLLQNK-DKPAIINVNIGTTVKGAVDD----LDLVIQTLEE 262 (476)
Q Consensus 207 ------~v~~v~~~~-----~g~~D--------~~~Le~~l~~~~-~~p~~vv~t~gtt~tG~id~----l~~I~~ia~~ 262 (476)
.+..++... ++ +| +++|+++|.+.. .++.+|+++...++.|.+.| +++|.++|++
T Consensus 177 ~~~~~~~~~~v~~p~~~~~~~~-~~~~~~~~~~~~~le~~i~~~~~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~ 255 (472)
T 3hmu_A 177 QSGLIPDVHHINQPNWWAEGGD-MDPEEFGLARARELEEAILELGENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDK 255 (472)
T ss_dssp TTCCCSSEEEECCCCHHHHCTT-CCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHH
T ss_pred ccCCCCCcEEeCCCccccCCcc-cCHHHHHHHHHHHHHHHHHhcCCCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHH
Confidence 345555321 11 34 788999987432 23457777766778888887 9999999999
Q ss_pred hCCCCCceEEEEecCcccccccccccCCCCCCc-ccccEEEEcCCCCCCCC-CCceeEEeehhhhhhhcCCccccCCCCC
Q 011842 263 SGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFK-KPIGSVSVSGHKFVGCP-MPCGVQITRMEHINVLSSNVEYLASRDA 340 (476)
Q Consensus 263 ~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~-~~~Dsi~~s~hK~l~~p-~~~G~l~~~~~~~~~l~~~~~yl~~~~~ 340 (476)
||+ ++++|++|.++........ .... ...|+++++ |.++.+ +++|++++++++++.+.. ..+.. ..
T Consensus 256 ~gi-----llI~DEv~~gfgr~G~~~a--~~~~~v~pdi~t~s--K~l~gg~~plG~v~~~~~i~~~~~~-~~~~~--~~ 323 (472)
T 3hmu_A 256 YDI-----LLIADEVICGFGRTGNWFG--TQTMGIRPHIMTIA--KGLSSGYAPIGGSIVCDEVAHVIGK-DEFNH--GY 323 (472)
T ss_dssp TTC-----EEEEECTTTTTTTTSSSCH--HHHHTCCCSEEEEC--GGGTTTSSCCEEEEEEHHHHHHHTT-SCBCC--CC
T ss_pred cCC-----EEEEEccccCCcccCccch--hHHhCCCCceeeec--hhhhcCCcceEEEEECHHHHHhccc-CCccc--cC
Confidence 999 9999999986532110000 0001 126777765 988766 799999999988777621 11110 01
Q ss_pred cccCCCCChhHHHHHHHHHHhChhcHHHHHHHHH-HHHHHHHHHHHhc---CCeEeecCCeeEEEEecCCc---------
Q 011842 341 TIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCL-RNAHYLKDRLLDA---GISAMLNELSSTVVFERPQD--------- 407 (476)
Q Consensus 341 ~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~-~~a~~l~~~L~~~---g~~~~~~~~~~iv~f~~~~~--------- 407 (476)
++.+ .++.+.+++..+..-.-++.+++.. ++.+++++.|++. +......+...++.|....+
T Consensus 324 t~~~-----np~a~aAa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~v~~vr~~G~~~~i~~~~~~~~~~~~~~ 398 (472)
T 3hmu_A 324 TYSG-----HPVAAAVALENLRILEEENILDHVRNVAAPYLKEKWEALTDHPLVGEAKIVGMMASIALTPNKASRAKFAS 398 (472)
T ss_dssp TTTT-----CHHHHHHHHHHHHHHHHTTHHHHHHHTHHHHHHHHHHGGGGSTTEEEEEEETTEEEEEECSCGGGTCCBSS
T ss_pred CCCC-----CHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCceEEEEEecCccccccccc
Confidence 1121 2445555554442111134567777 7888888888764 22222223334444443211
Q ss_pred ------HHH-----hhceeecccCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 011842 408 ------EEF-----VRRWQLACQGNIAHVVVMPNVTIDKLDDFLNELIENRSTWY 451 (476)
Q Consensus 408 ------~~~-----~~~~~l~~~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~ 451 (476)
..+ .+++.+...++.+|++....+|+++||+++++|+++.++..
T Consensus 399 ~~~~~~~~~~~~l~~~Gv~v~~~g~~iRi~p~~~~t~e~i~~~l~~l~~~l~~~~ 453 (472)
T 3hmu_A 399 EPGTIGYICRERCFANNLIMRHVGDRMIISPPLVITPAEIDEMFVRIRKSLDEAQ 453 (472)
T ss_dssp CTTHHHHHHHHHHHHTTBCCEEETTEEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHCCcEEEecCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 111 12333333348999998889999999999999998876553
No 221
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.80 E-value=3.5e-18 Score=176.30 Aligned_cols=283 Identities=15% Similarity=0.087 Sum_probs=173.7
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHH--------------HHc
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAA--------------RMY 204 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~--------------~~~ 204 (476)
+++.++.++++++++ .. ..+++|+|||+|+..++.++|...+++.|++.+++|......+ ...
T Consensus 96 ~~~~~l~~~la~~~~-~~--~~v~~~~sgseA~~~al~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~ 172 (434)
T 2epj_A 96 EAEVLLAEKILGYVK-RG--GMIRFVNSGTEATMTAIRLARGYTGRDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSA 172 (434)
T ss_dssp HHHHHHHHHHHHHHC-TT--CEEEEESSHHHHHHHHHHHHHHHHCCCEEEEEETCCCCSSGGGSEECC------CEESST
T ss_pred HHHHHHHHHHHHhCC-CC--CEEEEeCCHHHHHHHHHHHHHHhhCCCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCC
Confidence 666778888888884 22 2489999999999999998764334555555555554322111 012
Q ss_pred CC------eEEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC----HHHHHHHHHHhCCCCCceEEEE
Q 011842 205 RM------ECVKVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD----LDLVIQTLEESGFTQDRFYIHC 274 (476)
Q Consensus 205 G~------~v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~----l~~I~~ia~~~g~~~~~~~lhv 274 (476)
|+ ++..+|.+ |+++|+++|++...++.+|+++...+++|.+.| +++|.++|++||+ ++++
T Consensus 173 g~~~~~~~~~~~~~~~-----d~~~le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~-----~lI~ 242 (434)
T 2epj_A 173 GVPEAVARLTLVTPYN-----DVEALERVFAEYGDRIAGVIVEPVIANAGVIPPRREFLAALQRLSRESGA-----LLIL 242 (434)
T ss_dssp TCCHHHHTTEEEEETT-----CHHHHHHHHHHHGGGEEEEEECSSBCSSSCBCCCHHHHHHHHHHHHHHTC-----EEEE
T ss_pred CCCCcccCceEecCCC-----CHHHHHHHHHhCCCCEEEEEEeCCcCCCCccCCCHHHHHHHHHHHHHcCC-----EEEE
Confidence 43 35666653 899999999753223456766655677899888 9999999999999 9999
Q ss_pred ecCcccccccccccCCCCCCcc-cccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHH
Q 011842 275 DGALFGLMMPFVKKAPKVSFKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIF 353 (476)
Q Consensus 275 D~a~~g~~~~~~~~~~~~~~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~ 353 (476)
|++|+++ ... ... ..+... ..|++++ +|+++.++++|++++++++++.+.....+.. ..++. ..++.
T Consensus 243 DEv~~g~-~~g-~~~-~~~~~~~~~di~s~--sK~l~~G~~~G~v~~~~~~~~~l~~~~~~~~--~~t~~-----~~~~~ 310 (434)
T 2epj_A 243 DEVVTGF-RLG-LEG-AQGYFNIEGDIIVL--GKIIGGGFPVGAVAGSREVMSLLTPQGKVFN--AGTFN-----AHPIT 310 (434)
T ss_dssp EETTTTT-TSS-TTH-HHHHHTCCCSEEEE--EGGGGTTSSCEEEEECHHHHTTBTTTSSBCC--CCTTT-----TCHHH
T ss_pred Ecchhce-eCC-cch-hhHHhCCCCCeeee--cchhcCCcceeeeeecHHHHHhhccCCCccc--CCCCC-----cCHHH
Confidence 9999865 211 100 000001 2576644 5988888899999999887765543111100 01111 12333
Q ss_pred HHH---HHHHhChhcHHHHHHHHHHHHHHHHHHHHhc----CCeEeecCCeeEEEEecCC----------------cHHH
Q 011842 354 LWY---TLNRKGYKGFQKEVQKCLRNAHYLKDRLLDA----GISAMLNELSSTVVFERPQ----------------DEEF 410 (476)
Q Consensus 354 ~~~---~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----g~~~~~~~~~~iv~f~~~~----------------~~~~ 410 (476)
+.+ +++.+.. ++..++..++++++.+.|++. ++....++..+++.+..+. ...+
T Consensus 311 ~aa~~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 387 (434)
T 2epj_A 311 MAAGLATLKALEE---EPVYSVSREAAKALEEAASEVLDRTGLPYTINRVESMMQLFIGVEEVSNAAQARKADKKFYVKL 387 (434)
T ss_dssp HHHHHHHHHHHHH---SCHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEETTEEEEEETCSCCSSHHHHTTSCHHHHHHH
T ss_pred HHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeeeEEEEEEeCCCcccchhccccCHHHHHHH
Confidence 333 3333322 345677778888888888774 6533223334455555432 1122
Q ss_pred h-----hceeecccCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 011842 411 V-----RRWQLACQGNIAHVVVMPNVTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 411 ~-----~~~~l~~~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~ 450 (476)
. +++.+...+ ..|++++..+|+++|++++++|+++.+++
T Consensus 388 ~~~l~~~Gv~v~~~~-~~~~~~~~~~t~e~i~~~l~~l~~~l~~~ 431 (434)
T 2epj_A 388 HEEMLRRGVFIAPSN-LEAVFTGLPHQGEALEIAVEGLRSSLKTV 431 (434)
T ss_dssp HHHHHHTTEECCSST-TSCEECCTTCSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCeEEeccC-CCcEEEeccCCHHHHHHHHHHHHHHHHHH
Confidence 2 222232222 12455667889999999999999987765
No 222
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.79 E-value=1.3e-17 Score=173.51 Aligned_cols=295 Identities=11% Similarity=0.004 Sum_probs=180.3
Q ss_pred HHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhh------CCCcEEEecCCCchHHHHHHHHcCC-----
Q 011842 138 RQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREV------FPDGILYASRESHYSVFKAARMYRM----- 206 (476)
Q Consensus 138 ~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~------~p~~~Vl~s~~~H~S~~~~~~~~G~----- 206 (476)
.+...++.++++++++.+.+ .++||+||++||..++.+++.. .+++.|++.+++|......+..++.
T Consensus 93 ~~~~~~la~~l~~~~~~~~~--~v~~~~ggseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~ 170 (459)
T 4a6r_A 93 HPAVVELSSLLAEVTPAGFD--RVFYTNSGSESVDTMIRMVRRYWDVQGKPEKKTLIGRWNGYHGSTIGGASLGGMKYMH 170 (459)
T ss_dssp CHHHHHHHHHHHHHSCTTCC--EEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCTTTC
T ss_pred CHHHHHHHHHHHHhCCCCCC--EEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHhhcCChhhc
Confidence 36778889999999877544 4999999999999999998863 1467777777766544333333221
Q ss_pred --------eEEEEeCCC-----CCccC--------HHHHHHHHHcCC-CCcEEEEEeeCCCccccccC----HHHHHHHH
Q 011842 207 --------ECVKVDCLI-----SGEID--------CADFKAKLLQNK-DKPAIINVNIGTTVKGAVDD----LDLVIQTL 260 (476)
Q Consensus 207 --------~v~~v~~~~-----~g~~D--------~~~Le~~l~~~~-~~p~~vv~t~gtt~tG~id~----l~~I~~ia 260 (476)
.+..++... +. +| +++|+++|.+.. ..+.+|+++...++.|.+.+ +++|.++|
T Consensus 171 ~~~~~~~~~~~~~~~p~~~~~~~~-~d~~~~~~~~~~~le~~i~~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~ 249 (459)
T 4a6r_A 171 EQGDLPIPGMAHIEQPWWYKHGKD-MTPDEFGVVAARWLEEKILEIGADKVAAFVGEPIQGAGGVIVPPATYWPEIERIC 249 (459)
T ss_dssp ---CCSCSSEEEECCCCHHHHCTT-CCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHH
T ss_pred cccCCCCCCCEEeCCCccccCCcc-cCHHHHHHHHHHHHHHHHHHcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHH
Confidence 344455321 12 44 889999987532 23456767666777788777 99999999
Q ss_pred HHhCCCCCceEEEEecCcccccccccccCCCCCCcc-cccEEEEcCCCCCCCC-CCceeEEeehhhhhhhcCCccccCCC
Q 011842 261 EESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKK-PIGSVSVSGHKFVGCP-MPCGVQITRMEHINVLSSNVEYLASR 338 (476)
Q Consensus 261 ~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~-~~Dsi~~s~hK~l~~p-~~~G~l~~~~~~~~~l~~~~~yl~~~ 338 (476)
++||+ ++++|++|.++........ ..... ..|+++++ |.++.+ +++|++++++++++.+.....+..
T Consensus 250 ~~~~~-----llI~DEv~~g~gr~G~~~~--~~~~~~~pdi~t~s--K~l~gg~~~lg~v~~~~~i~~~~~~~~~~~~-- 318 (459)
T 4a6r_A 250 RKYDV-----LLVADEVICGFGRTGEWFG--HQHFGFQPDLFTAA--KGLSSGYLPIGAVFVGKRVAEGLIAGGDFNH-- 318 (459)
T ss_dssp HHTTC-----EEEEECTTTTTTTTSSSSH--HHHHTCCCSEEEEC--GGGGTTSSCCEEEEECHHHHHHHHHHCTTHH--
T ss_pred HHcCC-----EEEEeccccCCCcccccch--HhhcCCCCCeeehh--hhhcCCCCCccceeeCHHHHHHhhcCCCccc--
Confidence 99999 9999999986532211000 01111 25777765 888766 799999999887766531101100
Q ss_pred CCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHH-HHHHHHHHHH----HhcCCeEeecCCeeEEEEecCCc------
Q 011842 339 DATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCL-RNAHYLKDRL----LDAGISAMLNELSSTVVFERPQD------ 407 (476)
Q Consensus 339 ~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~-~~a~~l~~~L----~~~g~~~~~~~~~~iv~f~~~~~------ 407 (476)
..++.++ ++.+.+++..+..-.-++.+++.. ++.+++++.| .+.+......+..+++.+....+
T Consensus 319 ~~t~~~~-----~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 393 (459)
T 4a6r_A 319 GFTYSGH-----PVCAAVAHANVAALRDEGIVQRVKDDIGPYMQKRWRETFSRFEHVDDVRGVGMVQAFTLVKNKAKREL 393 (459)
T ss_dssp HHHHCSC-----HHHHHHHHHHHHHHHHTCHHHHHHHTHHHHHHHHHHHHHTTCTTEEEEEEETTEEEEEECSBTTTTBC
T ss_pred CCCCCCC-----HHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEEEEEEEEEEecCcccccc
Confidence 0111211 344444444432101123445555 5556666665 33343333333334444443211
Q ss_pred --------HHH-----hhceeecccCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 011842 408 --------EEF-----VRRWQLACQGNIAHVVVMPNVTIDKLDDFLNELIENRSTWY 451 (476)
Q Consensus 408 --------~~~-----~~~~~l~~~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~ 451 (476)
..+ .++..+...++.+|++++..+|+++|+.++++|+++.++..
T Consensus 394 ~~~~~~~~~~~~~~l~~~Gv~v~~~g~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 450 (459)
T 4a6r_A 394 FPDFGEIGTLCRDIFFRNNLIMRACGDHIVSAPPLVMTRAEVDEMLAVAERCLEEFE 450 (459)
T ss_dssp CSSTTHHHHHHHHHHHHTTEECEEETTEEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHCCeEEecCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 111 12333333358999998889999999999999999887764
No 223
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.79 E-value=3.9e-17 Score=169.55 Aligned_cols=291 Identities=14% Similarity=0.081 Sum_probs=175.7
Q ss_pred HHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHc-C-----------
Q 011842 138 RQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMY-R----------- 205 (476)
Q Consensus 138 ~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~-G----------- 205 (476)
.+.+.++.++++++++.+. ....+||+|||+||..|+.+++....++.|++.+.+|......+..+ +
T Consensus 103 ~~~~~~la~~l~~~~~~~~-~~~v~~~~sGseA~~~Alk~a~~~~g~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~ 181 (451)
T 3oks_A 103 YEGYVAVCEQLNRLTPVRG-DKRSALFNSGSEAVENAVKIARSHTHKPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGP 181 (451)
T ss_dssp CHHHHHHHHHHHHHSSCCS-SEEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCS
T ss_pred CHHHHHHHHHHHHhCCcCC-CCEEEEeCcHHHHHHHHHHHHHHhcCCCeEEEEcCCcCCccHHHHHhcCCCcccccCCCC
Confidence 3677788899999987442 23599999999999999999886435567777666654433332222 1
Q ss_pred --CeEEEEeCCCC-------------CccCHHHHHHHHHcC--CCCcEEEEEeeCCCccccccC----HHHHHHHHHHhC
Q 011842 206 --MECVKVDCLIS-------------GEIDCADFKAKLLQN--KDKPAIINVNIGTTVKGAVDD----LDLVIQTLEESG 264 (476)
Q Consensus 206 --~~v~~v~~~~~-------------g~~D~~~Le~~l~~~--~~~p~~vv~t~gtt~tG~id~----l~~I~~ia~~~g 264 (476)
..+..+|.... +.-+++.+++.|++. .+.+.+|+++...++.|.+.+ +++|.++|++||
T Consensus 182 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g 261 (451)
T 3oks_A 182 FAPEIYRAPLSYPFRDAEFGKELATDGELAAKRAITVIDKQIGADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKND 261 (451)
T ss_dssp CCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTT
T ss_pred CCCCcEEeCCCccccccccccccchhhHHHHHHHHHHHHhhcCCCCEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcC
Confidence 14566665411 112456666666541 223445655544556677766 999999999999
Q ss_pred CCCCceEEEEecCcccccccccccCCCCCCcc-cccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCccc
Q 011842 265 FTQDRFYIHCDGALFGLMMPFVKKAPKVSFKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIM 343 (476)
Q Consensus 265 ~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~ 343 (476)
+ ++++|++|.++.... ... ..+... ..|+++++ |.++.++++|++++++++++.+.... + ..++.
T Consensus 262 ~-----~lI~DEv~~g~g~~g-~~~-~~~~~~~~pdi~t~s--K~l~~G~~iG~v~~~~~~~~~~~~~~-~----~~t~~ 327 (451)
T 3oks_A 262 V-----VFIADEVQTGFARTG-AMF-ACEHEGIDPDLIVTA--KGIAGGLPLSAVTGRAEIMDSPHVSG-L----GGTYG 327 (451)
T ss_dssp C-----EEEEECTTTTTTTTS-SSS-GGGGGTCCCSEEEEC--GGGGTTSSCEEEEEEHHHHTCSCTTS-B----CCSSS
T ss_pred C-----EEEEEecccCCCccc-cch-hhhhcCCCCCeeeeh--hhhhCCcceEEEEECHHHHhhhcCCC-c----CCCCC
Confidence 9 999999998653221 110 011111 25777554 99888999999999988776553211 0 01111
Q ss_pred CCCCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhc----CCeEeecCCeeEEEEec-------CCc---HH
Q 011842 344 GSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDA----GISAMLNELSSTVVFER-------PQD---EE 409 (476)
Q Consensus 344 ~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----g~~~~~~~~~~iv~f~~-------~~~---~~ 409 (476)
..++.+++++..+..-.-++.+++..++.+++++.|++. +......+...++.+.. +.. ..
T Consensus 328 -----~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~ 402 (451)
T 3oks_A 328 -----GNPIACAAALATIETIESEGLVARAQQIEKIMKDRLGRLQAEDDRIGDVRGRGAMIAMELVKAGTTEPDADLTKA 402 (451)
T ss_dssp -----SCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEEBSTTSCCBCHHHHHH
T ss_pred -----CCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEeeEEEEEEEecCccCCCCHHHHHH
Confidence 124555554444421111245566666777777776653 43332233233444432 221 11
Q ss_pred H-----hhceee-ccc--CCEEEEEEcCCCCHHHHHHHHHHHHHHHH
Q 011842 410 F-----VRRWQL-ACQ--GNIAHVVVMPNVTIDKLDDFLNELIENRS 448 (476)
Q Consensus 410 ~-----~~~~~l-~~~--~~~lRv~~~~~~T~edid~~~~~l~~~~~ 448 (476)
+ .++..+ ++. ++.+|++++..+|+++|++++++|+++.+
T Consensus 403 ~~~~l~~~Gv~v~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~ 449 (451)
T 3oks_A 403 LCAGAHAAGVIVLSCGTYGNVVRFLPPLSIGDDLLNEGLDVLEEVLR 449 (451)
T ss_dssp HHHHHHHTTEECEEECTTSCEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCcEEecCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHh
Confidence 2 123333 222 37899999999999999999999998765
No 224
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.78 E-value=2.1e-17 Score=171.79 Aligned_cols=292 Identities=14% Similarity=0.073 Sum_probs=172.8
Q ss_pred HHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHH-HHHHHcCC----------
Q 011842 138 RQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVF-KAARMYRM---------- 206 (476)
Q Consensus 138 ~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~-~~~~~~G~---------- 206 (476)
.+...+++++++++++.+. ...++||+|||+||..|+.+++...+++.|++.+.+|.... .+..+.+.
T Consensus 106 ~~~~~~la~~l~~~~~~~~-~~~v~~~~sGseA~~~alk~a~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~ 184 (453)
T 4ffc_A 106 YEQYVQVAELLNALTPGDH-DKRTALFNSGAEAVENAIKVARLATGRPAVVAFDNAYHGRTNLTMALTAKSMPYKSQFGP 184 (453)
T ss_dssp CHHHHHHHHHHHHHSSCSS-CEEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCS
T ss_pred CHHHHHHHHHHHHhCCCCC-CcEEEEeCcHHHHHHHHHHHHHHhcCCCEEEEEcCccCCcchHHHhhcCCCcccccCCCC
Confidence 3777788999999987542 23599999999999999998875435566666666654333 33222221
Q ss_pred ---eEEEEeCCC----CCccC--------HHHHHHHHHcCCCCcEEEEEeeCCCccccccC----HHHHHHHHHHhCCCC
Q 011842 207 ---ECVKVDCLI----SGEID--------CADFKAKLLQNKDKPAIINVNIGTTVKGAVDD----LDLVIQTLEESGFTQ 267 (476)
Q Consensus 207 ---~v~~v~~~~----~g~~D--------~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~----l~~I~~ia~~~g~~~ 267 (476)
.+..+|... ...++ ++.|++.+.. +.+.+|+++...++.|.+.+ +++|.++|++||+
T Consensus 185 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~i~~--~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~-- 260 (453)
T 4ffc_A 185 FAPEVYRMPASYPLRDEPGLTGEEAARRAISRIETQIGA--QSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGV-- 260 (453)
T ss_dssp CCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHHHHHTCG--GGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTC--
T ss_pred CCCCcEEeCCCccccCccccchHHHHHHHHHHHHHhcCC--CCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCC--
Confidence 456666541 11122 3444444422 22345555444555566655 9999999999999
Q ss_pred CceEEEEecCcccccccccccCCCCCCcc-cccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCC
Q 011842 268 DRFYIHCDGALFGLMMPFVKKAPKVSFKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSR 346 (476)
Q Consensus 268 ~~~~lhvD~a~~g~~~~~~~~~~~~~~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr 346 (476)
++++|++|.++.... ... ..+... ..|+++++ |.++.++++|++++++++++.+..... ..++.+
T Consensus 261 ---llI~DEv~~g~g~~g-~~~-a~~~~~~~pdi~t~s--K~~~~G~~~G~~~~~~~i~~~~~~~~~-----~~t~~~-- 326 (453)
T 4ffc_A 261 ---VFIADEVQTGFARTG-AWF-ASEHEGIVPDIVTMA--KGIAGGMPLSAVTGRAELMDAVYAGGL-----GGTYGG-- 326 (453)
T ss_dssp ---EEEEECTTTTTTTTS-SSS-THHHHTCCCSEEEEC--GGGGTTSSCEEEEEEHHHHTTSCTTSS-----CCSSSS--
T ss_pred ---EEEEecCccCCCccc-ccc-hhhhcCCCcchHhhh--hhhcCCcCeEEEEECHHHHhhhcccCc-----CCCCCc--
Confidence 999999997653221 110 011111 25777654 988888999999999887765532110 011121
Q ss_pred CChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHh----cCCeEeecCCeeEEEEec-------CCc---HHH--
Q 011842 347 NGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLD----AGISAMLNELSSTVVFER-------PQD---EEF-- 410 (476)
Q Consensus 347 ~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~g~~~~~~~~~~iv~f~~-------~~~---~~~-- 410 (476)
.++.+.+++..+....-++.+++..++.+++++.|++ .+..........++.+.. +.. ..+
T Consensus 327 ---~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (453)
T 4ffc_A 327 ---NPVTCAAAVAALGVMRELDLPARARAIEASVTSRLSALAEEVDIIGEVRGRGAMLAIEIVKPGTLEPDAALTKSIAA 403 (453)
T ss_dssp ---CHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCSSEEEEEEETTEEEEEEBCTTSCCBCHHHHHHHHH
T ss_pred ---CHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeeceEEEEEEecCcccCCCHHHHHHHHH
Confidence 2344544444432111124556666666677766655 343322223233444432 111 111
Q ss_pred ---hhceee-ccc--CCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 011842 411 ---VRRWQL-ACQ--GNIAHVVVMPNVTIDKLDDFLNELIENRSTWY 451 (476)
Q Consensus 411 ---~~~~~l-~~~--~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~ 451 (476)
.++..+ +.. ++.+|++++..+|+++|++++++|+++.+++.
T Consensus 404 ~l~~~Gv~v~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 450 (453)
T 4ffc_A 404 EALSQGVLILTCGTFGNVIRLLPPLVIGDDLLDEGITALSDIIRAKA 450 (453)
T ss_dssp HHHHTTEECCEECTTSCEEEECCCTTCCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHhCCCEEecCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 123333 222 37899999999999999999999999987654
No 225
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=99.76 E-value=2.5e-17 Score=175.05 Aligned_cols=303 Identities=10% Similarity=-0.032 Sum_probs=187.9
Q ss_pred hHHHHHHHH-HHHHHHcCC--CC-CcccEEEcCCchhHHHHHHHHHH--h-hCCCcEEEecCCCchHHHHHHHHc--CCe
Q 011842 137 SRQFEVGVL-DWFARLWEL--EN-NEYWGYITNCGTEGNLHGILVGR--E-VFPDGILYASRESHYSVFKAARMY--RME 207 (476)
Q Consensus 137 ~~~le~~~~-~~la~l~g~--~~-~~~~g~~t~ggt~An~~al~aa~--~-~~p~~~Vl~s~~~H~S~~~~~~~~--G~~ 207 (476)
..++++++. .|+.+..+. +. +..++++|+|+++++..++.+.. . ..||+.|++++++|..+..++.+. |++
T Consensus 140 ~~~lr~~ia~~~~~~~~~~~~~~~~~~~I~~t~G~~eal~~~~~~l~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~~~g~~ 219 (546)
T 2zy4_A 140 MLNISEKIVRQYIIREMGADAIPSESVNLFAVEGGTAAMAYIFESLKLNGLLKAGDKVAIGMPVFTPYIEIPELAQYALE 219 (546)
T ss_dssp CCHHHHHHHHHHHHHHTTCTTSCGGGEEEEEEEHHHHHHHHHHHHHHHTTSSCTTCEEEEEESCCHHHHHHHHSTTSCCE
T ss_pred CHHHHHHHHHHHHHHhccCCCCCCCcceEEEECCHHHHHHHHHHHhhhhhcCCCCCEEEEeCCCCccHHHHHHHcCCCcE
Confidence 346666644 566665543 11 23569999999999998887632 1 138999999999999999887665 578
Q ss_pred EEEEeCCCC--CccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC---HHHHHHHH--HHhCCCCCceEEEEecCccc
Q 011842 208 CVKVDCLIS--GEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD---LDLVIQTL--EESGFTQDRFYIHCDGALFG 280 (476)
Q Consensus 208 v~~v~~~~~--g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~---l~~I~~ia--~~~g~~~~~~~lhvD~a~~g 280 (476)
++.++++++ +.+|+++|++.+..+ +.+|++++++|+||.+-+ +++|+++| ++||+ +|++|++|+.
T Consensus 220 ~~~v~~~~~~~~~~d~~~l~~~~~~~---~k~v~l~~p~NPtG~~~~~~~l~~l~~~a~~~~~~~-----~ii~De~y~~ 291 (546)
T 2zy4_A 220 EVAINADPSLNWQYPDSELDKLKDPA---IKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDL-----MILTDDVYGT 291 (546)
T ss_dssp EEEEECBGGGTTBCCHHHHGGGGSTT---EEEEEEESSCSSSCBCCCHHHHHHHHHHHHHTCTTC-----EEEEECTTGG
T ss_pred EEEEecCcccCCCCCHHHHHHhhCCC---CeEEEEECCCCCCCccCCHHHHHHHHHHHHhccCCc-----EEEEeCcchh
Confidence 899998653 469999998876433 347777899999999866 66788888 77899 9999999986
Q ss_pred ccccccccCCCCCCcccccEEEEcCCCCCC-CCCCceeEEeehh-hhhhhcCC----------ccccC---C--------
Q 011842 281 LMMPFVKKAPKVSFKKPIGSVSVSGHKFVG-CPMPCGVQITRME-HINVLSSN----------VEYLA---S-------- 337 (476)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~Dsi~~s~hK~l~-~p~~~G~l~~~~~-~~~~l~~~----------~~yl~---~-------- 337 (476)
+... ..+........+++..|++|+++ +++++|+++++++ +++.+... ..|-. .
T Consensus 292 ~~~~---~~s~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~l~~~l~~~~p~~~~~~l~~~~~~~~~~p~~~~~~~ 368 (546)
T 2zy4_A 292 FADD---FQSLFAICPENTLLVYSFSKYFGATGWRLGVVAAHQQNVFDLALDKLQESEKVALDHRYRSLLPDVRSLKFID 368 (546)
T ss_dssp GSTT---CCCHHHHCGGGEEEEEESTTTTTCGGGCEEEEEEESSCHHHHHHHTSCHHHHHHHHHHHTTTCSCGGGCCHHH
T ss_pred hccc---CcCHHHhCCCCEEEEEeCccccCCCCcceEEEEECCHHHHHHHHhhcchhhhHHHHHHhhhccccccchhhhh
Confidence 6532 11111111124678889999985 6789999999875 55443110 00100 0
Q ss_pred ------CC-CcccCCCCChhHHHHHH-----HHHHh--ChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecCCee-EEEE
Q 011842 338 ------RD-ATIMGSRNGHAPIFLWY-----TLNRK--GYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNELSS-TVVF 402 (476)
Q Consensus 338 ------~~-~~~~~sr~~~~~l~~~~-----~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~~~~-iv~f 402 (476)
.. ....+. +...+.+.+ ....+ +..-.++..+.+.++++++.+.|. .++. ..++..+ ++.+
T Consensus 369 ~~~~~~~~~~~~~~~--~~s~~~Q~a~a~~a~~all~~~~~~~~~~r~~~~~r~~~l~~~L~-~~~~-~~~~~~~~~l~~ 444 (546)
T 2zy4_A 369 RLVADSRAVALNHTA--GLSTPQQVQMALFSLFALMDEADEYKHTLKQLIRRRETTLYRELG-MPPL-RDENAVDYYTLI 444 (546)
T ss_dssp HHHHHTTTTTTGGGC--SSCHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHGGGT-SSCC-CCTTBCCSEEEE
T ss_pred hhhhhhHHHHhhccC--CCCcHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcC-CCcc-cCCCCeeEEEEE
Confidence 00 000000 011122221 11222 122345556666667777777774 4432 2233444 3444
Q ss_pred ecCC-------------------cHHHh------hceee-cc-----cCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHH
Q 011842 403 ERPQ-------------------DEEFV------RRWQL-AC-----QGNIAHVVVMPNVTIDKLDDFLNELIENRSTWY 451 (476)
Q Consensus 403 ~~~~-------------------~~~~~------~~~~l-~~-----~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~ 451 (476)
..+. +.++. .+..+ +. ..+.+|+++. ..++++++++++.|+++.++++
T Consensus 445 ~l~~~~~~~~~~~~~~wl~~~~~~~~~l~~ll~~~gV~v~pG~~F~~~~~~iRis~~-~~~~e~i~~~~~~l~~~l~~~~ 523 (546)
T 2zy4_A 445 DLQDVTAKLYGEAFSEWAVKQSSTGDMLFRIADETGIVLLPGRGFGSNRPSGRASLA-NLNEYEYAAIGRALRKMADELY 523 (546)
T ss_dssp EHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHSCCCEESSCTTCSSCEEEEESS-SSCHHHHHHHHHHHHHHHHHHH
T ss_pred EHHHhhcccccHHHHHHhhccCCHHHHHHHHHHHCCEEEeCccccCCCCCeEEEEec-cCCHHHHHHHHHHHHHHHHHHH
Confidence 4321 11111 12222 21 2367999886 4589999999999999988887
Q ss_pred hcCC
Q 011842 452 EDGK 455 (476)
Q Consensus 452 ~~~~ 455 (476)
+.++
T Consensus 524 ~~~~ 527 (546)
T 2zy4_A 524 AEYS 527 (546)
T ss_dssp HHTC
T ss_pred HHHH
Confidence 6555
No 226
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=99.76 E-value=6.5e-18 Score=172.16 Aligned_cols=269 Identities=11% Similarity=0.028 Sum_probs=178.3
Q ss_pred HHHHHHHHHHHHHHcCCCCCc-ccEEEcCCchhHHHHHHHHHHhhCCCc----EEEecCCCchHHHHHHHHcCCeEEEEe
Q 011842 138 RQFEVGVLDWFARLWELENNE-YWGYITNCGTEGNLHGILVGREVFPDG----ILYASRESHYSVFKAARMYRMECVKVD 212 (476)
Q Consensus 138 ~~le~~~~~~la~l~g~~~~~-~~g~~t~ggt~An~~al~aa~~~~p~~----~Vl~s~~~H~S~~~~~~~~G~~v~~v~ 212 (476)
.++++++.+|+. ..|.+.++ .++++|+|+++++..++.+..+ ||+ .|++++++|.++...++..|++++.++
T Consensus 71 ~~lr~aia~~~~-~~g~~~~~~~~i~~t~G~~~al~~~~~~l~~--~Gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~ 147 (391)
T 3bwn_A 71 PELEDAIKDLHG-VVGNAATEDRYIVVGTGSTQLCQAAVHALSS--LARSQPVSVVAAAPFYSTYVEETTYVRSGMYKWE 147 (391)
T ss_dssp HHHHHHHHHHHH-HHCSBCCSSSEEEEEEHHHHHHHHHHHHHHH--TSSSSSEEEEECSSCCTHHHHHHHTTCBTTEEEE
T ss_pred HHHHHHHHHHHH-hcCCCCCCCCeEEEeCChHHHHHHHHHHhcC--CCCCCcceEEEcCCCchhHHHHHHHcCCeEEEec
Confidence 689999998887 45765433 4699999999999999888876 888 999999999999999999999999888
Q ss_pred CCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhC--CCCCceEEEEecCcccccccccccCC
Q 011842 213 CLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESG--FTQDRFYIHCDGALFGLMMPFVKKAP 290 (476)
Q Consensus 213 ~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g--~~~~~~~lhvD~a~~g~~~~~~~~~~ 290 (476)
++.++ ++ . .++.+|++++++|+||.+.+ +|++ ++|+ + ++++|++|+.. +.+
T Consensus 148 ~d~~~-l~--------~---~~~k~v~l~~p~NPtG~~~~--~l~~--~~~~~~~-----~ii~De~y~~~------~~~ 200 (391)
T 3bwn_A 148 GDAWG-FD--------K---KGPYIELVTSPNNPDGTIRE--TVVN--RPDDDEA-----KVIHDFAYYWP------HYT 200 (391)
T ss_dssp EESTT-CC--------C---CSCEEEEEESSCTTTCCCCC--CCC-------CCC-----EEEEECTTCST------TTS
T ss_pred CCHHH-cC--------C---CCCEEEEECCCCCCCchhHH--HHHH--HhhcCCC-----EEEEeCCCCCC------CCC
Confidence 76432 21 1 23457778999999999976 4544 2255 8 99999999731 111
Q ss_pred CCCCcccccEEEEcCCCCCC-CCCCceeEEe-ehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhC------
Q 011842 291 KVSFKKPIGSVSVSGHKFVG-CPMPCGVQIT-RMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKG------ 362 (476)
Q Consensus 291 ~~~~~~~~Dsi~~s~hK~l~-~p~~~G~l~~-~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g------ 362 (476)
.+......+++..|++|.++ .++++|++++ ++++++.+.....+.. .+. ..+.++++...+.
T Consensus 201 ~l~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~l~~~l~~~~~~~~-------~~~---~~~~q~a~~~~l~~~~~~~ 270 (391)
T 3bwn_A 201 PITRRQDHDIMLFTFSKITGHAGSRIGWALVKDKEVAKKMVEYIIVNS-------IGV---SKESQVRTAKILNVLKETC 270 (391)
T ss_dssp CCCCCBCCSEEEEEHHHHHSCGGGCEEEEEECCHHHHHHHHHHHHHHH-------SSC---CHHHHHHHHHHHHHHHHHT
T ss_pred ccccCCCCeEEEEechhhcCCCccceEEEEecCHHHHHHHHHHhcccc-------cCC---CHHHHHHHHHHHhCcchhc
Confidence 12222235788899999885 6789999998 6666655533222211 111 1233333333331
Q ss_pred ------hhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecC-Ce-------------eEEEEecCCcH---HHh--hceeec
Q 011842 363 ------YKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNE-LS-------------STVVFERPQDE---EFV--RRWQLA 417 (476)
Q Consensus 363 ------~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~-~~-------------~iv~f~~~~~~---~~~--~~~~l~ 417 (476)
.+.+++..+++.++++++.+.|++.+...+..+ .+ ..+.+..+..+ ... ++..+.
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~~~~~f~~~~~~~~g~~~~~~~~~~~~~~~~l~~~gV~v~ 350 (391)
T 3bwn_A 271 KSESESENFFKYGREMMKNRWEKLREVVKESDAFTLPKYPEAFCNYFGKSLESYPAFAWLGTKEETDLVSELRRHKVMSR 350 (391)
T ss_dssp TCCCTTTSHHHHHHHHHHHHHHHHHHHHHTCSSEECCCCCCEEETTTTEEECCCCSEEEEEESSSCCHHHHHHHTTEECE
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccccccccCCCcceEEEecCCcHHHHHHHHHHCCEEEc
Confidence 234677888888999999999998743333222 22 24455554321 122 223332
Q ss_pred ----c--cCCEEEEEEcCCCCHHHHHHHHHHHHHHHH
Q 011842 418 ----C--QGNIAHVVVMPNVTIDKLDDFLNELIENRS 448 (476)
Q Consensus 418 ----~--~~~~lRv~~~~~~T~edid~~~~~l~~~~~ 448 (476)
+ ..+.+|+++. +++++|+++++.|+++.+
T Consensus 351 pg~~fg~~~~~iRis~~--~~~e~i~~~~~~L~~~~~ 385 (391)
T 3bwn_A 351 AGERCGSDKKHVRVSML--SREDVFNVFLERLANMKL 385 (391)
T ss_dssp EGGGGTCCTTEEEEESC--SCHHHHHHHHHHHHSCC-
T ss_pred cCCCCCCCCCEEEEEec--CCHHHHHHHHHHHHHHHH
Confidence 1 2468999887 489999999999987653
No 227
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.76 E-value=3.6e-17 Score=168.20 Aligned_cols=280 Identities=14% Similarity=0.087 Sum_probs=170.0
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHH-H-------------Hc
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAA-R-------------MY 204 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~-~-------------~~ 204 (476)
+++.++.++++++++ +. ..+++|+||++|+..++.++|...+++.|++.+++|+.+...+ . ..
T Consensus 92 ~~~~~l~~~l~~~~~-~~--~~v~~~~~g~ea~~~al~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~ 168 (424)
T 2e7u_A 92 PLEVALAKKVKRAYP-FV--DLVRFVNSGTEATMSALRLARGYTGRPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSA 168 (424)
T ss_dssp HHHHHHHHHHHHHCT-TC--CEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCCCGGGSEECCSSSCCBCEESST
T ss_pred HHHHHHHHHHHHhCC-CC--CEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCC
Confidence 667778888888885 32 3489999999999999998654334455666666554432211 1 12
Q ss_pred CC------eEEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC----HHHHHHHHHHhCCCCCceEEEE
Q 011842 205 RM------ECVKVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD----LDLVIQTLEESGFTQDRFYIHC 274 (476)
Q Consensus 205 G~------~v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~----l~~I~~ia~~~g~~~~~~~lhv 274 (476)
|+ ++..+|.+ |+++|++++++..+++.+|+++...+++|.+.| +++|.++ ++||+ ++++
T Consensus 169 g~~~~~~~~~~~~~~~-----d~~~le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~-----~lI~ 237 (424)
T 2e7u_A 169 GVPEEYAKLTLVLEYN-----DPEGLREVLKRRGEEIAAIIFEPVVGNAGVLVPTEDFLKALHEA-KAYGV-----LLIA 237 (424)
T ss_dssp TCCHHHHTTEEEECTT-----CHHHHHHHHHHHGGGEEEEEECSSBCTTSCBCCCHHHHHHHHHG-GGGTC-----EEEE
T ss_pred CCCCccCCceEeCCCC-----CHHHHHHHHHhCCCCEEEEEEeCCCCCCCCcCCCHHHHHHHHHH-HHcCC-----EEEE
Confidence 32 35555543 899999999753223346666544555898877 9999999 99999 9999
Q ss_pred ecCcccccccccccCCCCCCc-ccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCc-cccCCCCCcccCCCCChhHH
Q 011842 275 DGALFGLMMPFVKKAPKVSFK-KPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNV-EYLASRDATIMGSRNGHAPI 352 (476)
Q Consensus 275 D~a~~g~~~~~~~~~~~~~~~-~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~-~yl~~~~~~~~~sr~~~~~l 352 (476)
|++|+++ ....... .+.. ...|++ +++|+++.++++|++++++++++.+.... .+.. .++. ..++
T Consensus 238 DEv~~g~-~~g~~~~--~~~~~~~~di~--s~sK~l~~G~~~G~~~~~~~~~~~~~~~~~~~~~---~t~~-----~~~~ 304 (424)
T 2e7u_A 238 DEVMTGF-RLAFGGA--TELLGLKPDLV--TLGKILGGGLPAAAYAGRREIMEKVAPLGPVYQA---GTLS-----GNPL 304 (424)
T ss_dssp ECTTTTT-TSSTTHH--HHHHTCCCSEE--EECGGGGTTSSCEEEEECHHHHTTBTTTSSBCCC---CTTC-----SCHH
T ss_pred ecCcccc-ccchhHH--HHHhCCCcchh--hhhhhhhCCcceEEEEEcHHHHhhhcccCCcccC---CCCC-----CCHH
Confidence 9999865 2211000 0100 125765 45699988899999999988776654311 1110 1111 1233
Q ss_pred HHHHHHHHhChhc-HHHHHHHHHHHHHHHHHHHHhc----CCeEeecCCeeEEEEecCC-------------c---HHHh
Q 011842 353 FLWYTLNRKGYKG-FQKEVQKCLRNAHYLKDRLLDA----GISAMLNELSSTVVFERPQ-------------D---EEFV 411 (476)
Q Consensus 353 ~~~~~l~~~g~~g-~~~~~~~~~~~a~~l~~~L~~~----g~~~~~~~~~~iv~f~~~~-------------~---~~~~ 411 (476)
.+.+++..+..-. .++..++..++++++++.|++. ++....++..+++.+..+. . ..+.
T Consensus 305 ~~aaa~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (424)
T 2e7u_A 305 AMAAGLATLELLEENPGYYAYLEDLGARLEAGLKEVLKEKGLPHTVNRVGSMITVFFTEGPVVTFQDARRTDTELFKRFF 384 (424)
T ss_dssp HHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEESSSSCCCSHHHHTTSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeeceEEEEEEeCCCCcchhhhcccCHHHHHHHH
Confidence 4433333331111 1456778888888898888774 6532223334455565543 0 1122
Q ss_pred h-----ceeecccCCEEEEEEcCCCCHHHHHHHHHHHHHH
Q 011842 412 R-----RWQLACQGNIAHVVVMPNVTIDKLDDFLNELIEN 446 (476)
Q Consensus 412 ~-----~~~l~~~~~~lRv~~~~~~T~edid~~~~~l~~~ 446 (476)
+ ++.+...+ ..|+.++..+|+++|++++++|+++
T Consensus 385 ~~l~~~Gv~v~~~~-~~~~~~~~~~t~~~i~~~l~~l~~~ 423 (424)
T 2e7u_A 385 HGLLDRGIYWPPSN-FEAAFLSVAHREEDVEKTLEALRKA 423 (424)
T ss_dssp HHHHTTTEECCSSS-SSCEECCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHCCeEEeccC-CCceEeeccCCHHHHHHHHHHHHHh
Confidence 1 22222221 1245566788999999999999865
No 228
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=99.70 E-value=3.6e-16 Score=160.43 Aligned_cols=302 Identities=9% Similarity=0.009 Sum_probs=185.3
Q ss_pred hhHHHHHHHHHHHHHHcCCC--CCcccEEEcCCchhHHHHHHHHHHhh--CCCcEEEecCCCchHHHHHHHHcCCeE-EE
Q 011842 136 HSRQFEVGVLDWFARLWELE--NNEYWGYITNCGTEGNLHGILVGREV--FPDGILYASRESHYSVFKAARMYRMEC-VK 210 (476)
Q Consensus 136 ~~~~le~~~~~~la~l~g~~--~~~~~g~~t~ggt~An~~al~aa~~~--~p~~~Vl~s~~~H~S~~~~~~~~G~~v-~~ 210 (476)
|..++++++.+++ +|-. ......+.|.|||.|...++..+... .|++.|+++++++.++...++..|++. ..
T Consensus 88 G~p~lr~aia~~~---~g~~~~~~~~~~~qt~ggtga~~~a~~~l~~~~~~pgd~V~ip~P~w~~y~~i~~~aG~~~V~~ 164 (420)
T 4h51_A 88 GYQPFIDEAVKII---YGNTVELENLVAVQTLSGTGAVSLGAKLLTRVFDAETTPIYLSDPTWPNHYGVVKAAGWKNICT 164 (420)
T ss_dssp CCHHHHHHHHHHH---HC---CGGGEEEEEEEHHHHHHHHHHHHHTTTSCTTTSCEEEEESCCTHHHHHHHHTTCCCEEE
T ss_pred ChHHHHHHHHHHh---cCCCccccccceeeecCchHHHHHHHHHHHHhcCCCCCEEEEecCCchhHHHHHHHcCCeEEEe
Confidence 5668888887765 3322 12223556899999998887766543 389999999999999999999999974 44
Q ss_pred EeCC--CCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccc---cCHHHHHHHHHHhCCCCCceEEEEecCcccccccc
Q 011842 211 VDCL--ISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAV---DDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPF 285 (476)
Q Consensus 211 v~~~--~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~i---d~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~ 285 (476)
.+.. .++.+|.+.+.+.+...+++..+++.+.+.|+||.+ +.+++|+++|+++++ ++++|++|.++.+..
T Consensus 165 ~~~~~~~~~~~d~~~~~~~l~~~~~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~-----~~~~D~~Y~~~~~~~ 239 (420)
T 4h51_A 165 YAYYDPKTVSLNFEGMKKDILAAPDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHH-----QVFFDSAYQGYASGS 239 (420)
T ss_dssp EECEEGGGTEECHHHHHHHHHHSCSSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTC-----EEEEEESCTTTTTSC
T ss_pred eccccccccCCCHHHHHHHHhccCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCc-----eEeeehhhhhhccCC
Confidence 4432 356789999999998776666677788889999998 458899999999999 999999998765432
Q ss_pred cccCC--CCCC-ccc-ccEEEEcCCC-CCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHH
Q 011842 286 VKKAP--KVSF-KKP-IGSVSVSGHK-FVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNR 360 (476)
Q Consensus 286 ~~~~~--~~~~-~~~-~Dsi~~s~hK-~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~ 360 (476)
..... ...+ ... --+++.|+.| +.+.+|++|++.+..+..+........+.....+...+. +...+..+...
T Consensus 240 ~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~r~~~s~~---p~~~a~~~~~~ 316 (420)
T 4h51_A 240 LDTDAYAARLFARRGIEVLLAQSFSKNMGLYSERAGTLSLLLKDKTKRADVKSVMDSLIREEYTCP---PAHGARLAHLI 316 (420)
T ss_dssp HHHHTHHHHHHHHTTCCCEEEEECTTTSCCGGGCEEEEEEECSCHHHHHHHHHHHHHHHHTTTSSC---CHHHHHHHHHH
T ss_pred cccchHHHHhHHhhCceEEEEeccccccccccCceEEEEecccCHHHHHHHHHHHHHhhhcccCcc---hHHHHHHHHHH
Confidence 11110 0000 011 1234456667 667899999999876533221110000000000000111 12222222222
Q ss_pred hC--------hhcHHHHHHHHHHHHHHHHHHHHhcCCeE---eecCCeeEEEEecCCcH--HHhhceee--cccCCEEEE
Q 011842 361 KG--------YKGFQKEVQKCLRNAHYLKDRLLDAGISA---MLNELSSTVVFERPQDE--EFVRRWQL--ACQGNIAHV 425 (476)
Q Consensus 361 ~g--------~~g~~~~~~~~~~~a~~l~~~L~~~g~~~---~~~~~~~iv~f~~~~~~--~~~~~~~l--~~~~~~lRv 425 (476)
+. .+.++.+.++..++++.|.+.|++.|... ...+..+.++|..-.++ +.+++..+ ..++ ||
T Consensus 317 l~d~~l~~~~~~~~~~m~~r~~~~R~~l~~~L~~~g~~~~~~~i~~q~GmF~~~gls~e~v~~L~e~~Vy~~~~g---Ri 393 (420)
T 4h51_A 317 LSNNELRKEWEAELSAMAERIRTMRRTVYDELLRLQTPGSWEHVINQIGMFSFLGLSKAQCEYCQNHNIFITVSG---RA 393 (420)
T ss_dssp HHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCTHHHHCCSSEEECCCCHHHHHHHHHTTEECCTTC---EE
T ss_pred hcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCeecCCCceEEecCcCHHHHHHHHhCCEEEcCCC---EE
Confidence 21 23456667778889999999999876321 11222333344322222 12333333 2222 88
Q ss_pred EEcCCCCHHHHHHHHHHHHHHHHHHHh
Q 011842 426 VVMPNVTIDKLDDFLNELIENRSTWYE 452 (476)
Q Consensus 426 ~~~~~~T~edid~~~~~l~~~~~~~~~ 452 (476)
++. ..|.+.|+++.++|.++.+.+.|
T Consensus 394 s~A-gl~~~ni~~~a~aI~~vvr~i~r 419 (420)
T 4h51_A 394 NMA-GLTHETALMLAQTINDAVRNVNR 419 (420)
T ss_dssp EGG-GCCHHHHHHHHHHHHHHHC----
T ss_pred Eec-cCCHHHHHHHHHHHHHHHHHhhc
Confidence 764 47899999999999999887664
No 229
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=99.69 E-value=2.4e-15 Score=151.82 Aligned_cols=296 Identities=15% Similarity=0.114 Sum_probs=190.1
Q ss_pred hHHHHHHHHHHHHHHcCCCCCcccE--EEcCCchhHHHHHHHHHHhhCCCcEEEecCCCch---HHH-----HHHHHcCC
Q 011842 137 SRQFEVGVLDWFARLWELENNEYWG--YITNCGTEGNLHGILVGREVFPDGILYASRESHY---SVF-----KAARMYRM 206 (476)
Q Consensus 137 ~~~le~~~~~~la~l~g~~~~~~~g--~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~---S~~-----~~~~~~G~ 206 (476)
..++|..+.+...++||++.. .|+ +-..+|+.||+.+..+..+ |+|.|+.-+..|. +.- ......|.
T Consensus 98 vD~iE~la~~rak~lF~a~~A-~w~VNVQP~SGs~AN~avy~All~--PGD~ilg~~l~~GGHltHg~~~~~~~v~~sg~ 174 (490)
T 3ou5_A 98 VDEIELLCQRRALEAFDLDPA-QWGVNVQPYSGSPANLAVYTALLQ--PHDRIMGLDLPDGGHLTHGYMSDVKRISATSI 174 (490)
T ss_dssp HHHHHHHHHHHHHHHTTCCTT-TEEEECCCSSHHHHHHHHHHHHCC---CCCEECBC-----------------------
T ss_pred HHHHHHHHHHHHHHHhCCCcc-ccCCCCCcCCHHHHHHHHHHHHcC--CCCEEEecccCCCCcccccccCCCcccccccc
Confidence 468999999999999999864 354 3456999999999999887 9999998777643 322 11223343
Q ss_pred --eEEEEeCC-CCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCcccccc
Q 011842 207 --ECVKVDCL-ISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMM 283 (476)
Q Consensus 207 --~v~~v~~~-~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~ 283 (476)
+.+.++++ +++.+|+|.+++...+. +|.+|++ |.+..-..-|++++.+||++.|+ +|++|.||-.+.+
T Consensus 175 ~~~~~~Y~vd~~t~~IDyd~~~~~A~~~--kPklIi~--G~SaY~r~id~~~~reIAd~vGA-----~Lm~DmAHiaGLV 245 (490)
T 3ou5_A 175 FFESMPYKLNPKTGLIDYNQLALTARLF--RPRLIIA--GTSAYARLIDYARMREVCDEVKA-----HLLADMAHISGLV 245 (490)
T ss_dssp -----CBCEETTTTEECHHHHHHHHHHH--CCSEEEE--CCSSCCSCCCHHHHHHHHHHHTC-----EEEEECGGGHHHH
T ss_pred cccccccccCCCCCcccHHHHHHHHhhc--CCCeEEE--CCccCccccCHHHHHHHHhhccc-----EEEechhhhhhhh
Confidence 45555666 46899999999988765 3447766 65555667899999999999999 9999999965544
Q ss_pred cccccCCCCCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhh---cCCccccCCC------CCcccCCCCChhHHHH
Q 011842 284 PFVKKAPKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVL---SSNVEYLASR------DATIMGSRNGHAPIFL 354 (476)
Q Consensus 284 ~~~~~~~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l---~~~~~yl~~~------~~~~~~sr~~~~~l~~ 354 (476)
....+..++. .+|+++.+.||.|.+| +.|+++++++..... .....|-... =+.++|+...+...+.
T Consensus 246 A~g~~psP~~---~ADvVTtTTHKTLrGP-rGG~Il~~~~~~~~~~k~~~~~~~~~~kkin~aVFPg~qggp~~h~IAAk 321 (490)
T 3ou5_A 246 AAKVIPSPFK---HADIVTTTTHKTLRGA-RSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAV 321 (490)
T ss_dssp HTTSSCCGGG---TCSEEEEESSSTTCSC-SCEEEEEECSEEEECC--CCEEECCCHHHHHHHHTTTTCSSCCHHHHHHH
T ss_pred cccccCCccc---cceEEeccccccccCC-CceEEEeccccccccccccchhHHHHHHHHHhhcCccccccchHHHHHHH
Confidence 4444433333 3899999999999965 578888887421000 0000000000 0223444443444445
Q ss_pred HHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcCCeEeecC-CeeEEEEecCC----cH---HHhhcee-------ecc-
Q 011842 355 WYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAGISAMLNE-LSSTVVFERPQ----DE---EFVRRWQ-------LAC- 418 (476)
Q Consensus 355 ~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g~~~~~~~-~~~iv~f~~~~----~~---~~~~~~~-------l~~- 418 (476)
..+++......++++.++..+||+.|.+.|.+.|+.++... .+..+.+...+ .. ..+.+.. +|.
T Consensus 322 AVaf~Ea~~p~fk~Ya~qVv~NAkaLA~~L~~~G~~vvsGgTdnHlvLvDl~~~g~tG~~ae~~Le~agItvNkN~iP~D 401 (490)
T 3ou5_A 322 AVALKQACTPMFREYSLQVLKNARAMADALLERGYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGD 401 (490)
T ss_dssp HHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEEECCTTC
T ss_pred HHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhCCCeeecCCCCceEEEEeccccCCCHHHHHHHHHHcCcEECCCCCCCC
Confidence 55555544567899999999999999999999999876532 24555555321 11 2222211 222
Q ss_pred ----cCCEEEEEE----cCCCCHHHHHHHHHHHHHHHH
Q 011842 419 ----QGNIAHVVV----MPNVTIDKLDDFLNELIENRS 448 (476)
Q Consensus 419 ----~~~~lRv~~----~~~~T~edid~~~~~l~~~~~ 448 (476)
....+|+.+ +....++|++++.+.|.+++.
T Consensus 402 ~sp~~~SGiRiGTpa~TtRG~~e~dm~~IA~~I~~~l~ 439 (490)
T 3ou5_A 402 RSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVN 439 (490)
T ss_dssp CCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCeeEECCHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 235789974 566789999999999988664
No 230
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=99.68 E-value=4.9e-16 Score=160.21 Aligned_cols=270 Identities=11% Similarity=0.017 Sum_probs=179.6
Q ss_pred hHHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHH--------HhhCCCcEEEecCCCchHHHHHHHHcCCeE
Q 011842 137 SRQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVG--------REVFPDGILYASRESHYSVFKAARMYRMEC 208 (476)
Q Consensus 137 ~~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa--------~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v 208 (476)
..++++++.+++.+..+...++..+++|+|+++++..++.+. .+ ||+.|+++.+.|.++...++..|+++
T Consensus 102 ~~~lr~aia~~~~~~~~~~~~~~~iv~t~G~~~al~~~~~~l~~~~~~~~~~--~Gd~Vlv~~P~y~~~~~~~~~~g~~~ 179 (427)
T 2hox_A 102 SFELEKTIKELHEVVGNAAAKDRYIVFGVGVTQLIHGLVISLSPNMTATPDA--PESKVVAHAPFYPVFREQTKYFDKKG 179 (427)
T ss_dssp CHHHHHHHHHHHHHHTCBCCTTCEEEEESHHHHHHHHHHHHHSCCTTTCTTS--CCEEEEECSSCCHHHHHHHHHSCBTT
T ss_pred hHHHHHHHHHHHHHhCCcCCCCCEEEEeCCHHHHHHHHHHHHhhccccccCC--CCCEEEEeCCCcccHHHHHHHcCCee
Confidence 358999999998876554323346999999999999998887 44 89999999999999999999999987
Q ss_pred EEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecCccccccccccc
Q 011842 209 VKVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKK 288 (476)
Q Consensus 209 ~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~ 288 (476)
+.+ .+|+++|++++.++ +.+|++++++|+||.+-+ + + ++ ++ +.+.|+++.. + .
T Consensus 180 ~~~------~~d~~~l~~~~~~~---~k~v~l~~p~NPtG~~~~-~-~---l~--~~-----~~i~d~~~~~---~---~ 232 (427)
T 2hox_A 180 YVW------AGNAANYVNVSNPE---QYIEMVTSPNNPEGLLRH-A-V---IK--GC-----KSIYDMVYYW---P---H 232 (427)
T ss_dssp EEE------EEEGGGGTTCSCGG---GEEEEEESSCTTTCCCCC-C-S---ST--TC-----EEEEECTTCS---T---T
T ss_pred eee------cCCHHHHHHhhcCC---ceEEEEcCCCCCcccccH-H-H---Hc--CC-----CEEEeecccC---C---C
Confidence 643 45788888777543 347788899999999988 3 2 22 56 7888888642 1 1
Q ss_pred CCCCCCcccccEEEEcCCCCCC-CCCCceeEEee-hhhhhhhcCCccccCCCCCcccCCCCChhHHHHHHHHHHhC----
Q 011842 289 APKVSFKKPIGSVSVSGHKFVG-CPMPCGVQITR-MEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKG---- 362 (476)
Q Consensus 289 ~~~~~~~~~~Dsi~~s~hK~l~-~p~~~G~l~~~-~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g---- 362 (476)
.+...+....+++..|++|.++ .++++|+++++ +++++.+.....+.. .+. ..+.++++...+.
T Consensus 233 ~s~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~~~~l~~~l~~~~~~~~-------~~~---~~~~q~a~~~~L~~~~~ 302 (427)
T 2hox_A 233 YTPIKYKADEDILLFTMSKFTGHSGSRFGWALIKDESVYNNLLNYMTKNT-------EGT---PRETQLRSLKVLKEVVA 302 (427)
T ss_dssp TSCCCSCBCCSEEEEEHHHHTSCGGGCCEEEEECCHHHHHHHHHHHHHHT-------SSC---CHHHHHHHHHHHHHHHH
T ss_pred CCccccCCCceEEEEeChhcCCCCCceEEEEEECCHHHHHHHHHHHHhcC-------CCC---CHHHHHHHHHHhhcchh
Confidence 1112222236889999999886 66889999996 566655533222210 011 1233333333321
Q ss_pred ---------hhcHHHHHHHHHHHHHHHHHHHHhc-CCeE--e------------ecCCeeEEEEecCC-cH----HHh--
Q 011842 363 ---------YKGFQKEVQKCLRNAHYLKDRLLDA-GISA--M------------LNELSSTVVFERPQ-DE----EFV-- 411 (476)
Q Consensus 363 ---------~~g~~~~~~~~~~~a~~l~~~L~~~-g~~~--~------------~~~~~~iv~f~~~~-~~----~~~-- 411 (476)
.+-+++..+++.+++++|.+.|++. |+.. + .++..+.+.+..+. .. .+.
T Consensus 303 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~p~~g~f~~~~~~~~~~~~~~~ll~~ 382 (427)
T 2hox_A 303 MVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSDRFSYQELPQSEYCNYFRRMRPPSPSYAWVKCEWEEDKDCYQTFQN 382 (427)
T ss_dssp HHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTSSSEECCCCCSCEEETTTTEEECCCCSEEEEEECSGGGCSHHHHHHH
T ss_pred hhccccchhHHHHHHHHHHHHHHHHHHHHHHHhCcCccccccccccccccccccCCCCceEEEEECCCcHHHHHHHHHHH
Confidence 1234556677888999999999987 4322 1 12224555556553 11 222
Q ss_pred hceeecc------cCCEEEEEEcCCCCHHHHHHHHHHHHHHH
Q 011842 412 RRWQLAC------QGNIAHVVVMPNVTIDKLDDFLNELIENR 447 (476)
Q Consensus 412 ~~~~l~~------~~~~lRv~~~~~~T~edid~~~~~l~~~~ 447 (476)
+++.+.. ..+.+|+++. +++++|+.+++.|.++.
T Consensus 383 ~gI~v~pg~~f~~~~~~~Ris~~--~~~e~l~~~l~~l~~~~ 422 (427)
T 2hox_A 383 GRINTQNGVGFEASSRYVRLSLI--KTQDDFDQLMYYLKDMV 422 (427)
T ss_dssp TTEECEEGGGGTSCTTEEEEECS--SCHHHHHHHHHHHHHHH
T ss_pred CCEEEcCCCccCCCCCEEEEEec--CCHHHHHHHHHHHHHHH
Confidence 2333321 2468999987 48999999999998765
No 231
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.66 E-value=2.3e-15 Score=157.20 Aligned_cols=283 Identities=12% Similarity=0.025 Sum_probs=168.3
Q ss_pred HHHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhh------C-----------------CC---cEEEecC
Q 011842 138 RQFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREV------F-----------------PD---GILYASR 191 (476)
Q Consensus 138 ~~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~------~-----------------p~---~~Vl~s~ 191 (476)
.++++++.++++++++...+ .++||+|||+||..|+.+++.. . |+ +.|++.+
T Consensus 109 ~~l~~~la~~l~~~~~~~~~--~v~f~~sGseA~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~ 186 (472)
T 1ohv_A 109 ENFVEKLRESLLSVAPKGMS--QLITMACGSCSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFM 186 (472)
T ss_dssp TTHHHHHHHTGGGGCCTTCC--EEEEESSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEET
T ss_pred HHHHHHHHHHHHHhCCCCcC--EEEEeCCchhHHHHHHHHHHHHhhhhccCcccccccccccccccccccCCCCeEEEEC
Confidence 47888888877777654332 4999999999999999998622 0 23 5666655
Q ss_pred CC-chHHHHHHHHcCCeE-----------EEEeCCC-CC-------------ccCHHHHHHHHHcCC---CCcEEEEEee
Q 011842 192 ES-HYSVFKAARMYRMEC-----------VKVDCLI-SG-------------EIDCADFKAKLLQNK---DKPAIINVNI 242 (476)
Q Consensus 192 ~~-H~S~~~~~~~~G~~v-----------~~v~~~~-~g-------------~~D~~~Le~~l~~~~---~~p~~vv~t~ 242 (476)
.. |.+...+..+.|... ..++... .. ..|+++|+++|++.. .++.+|+++.
T Consensus 187 ~~yHg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~ 266 (472)
T 1ohv_A 187 GAFHGRTMGCLATTHSKAIHKIDIPSFDWPIAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEP 266 (472)
T ss_dssp TCCCCSSHHHHHHCCSCHHHHTTSCCCCCCEECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred CCcccccHHHHhcCCCccccccCCCCCCCcccCCCcccCccccccccchhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcC
Confidence 54 444444444444211 1122210 00 237899999997621 1345777776
Q ss_pred CCCccccccC----HHHHHHHHHHhCCCCCceEEEEecCccccccccccc-C-CCCCCcccccEEEEcCCCC-CCCCCCc
Q 011842 243 GTTVKGAVDD----LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKK-A-PKVSFKKPIGSVSVSGHKF-VGCPMPC 315 (476)
Q Consensus 243 gtt~tG~id~----l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~-~-~~~~~~~~~Dsi~~s~hK~-l~~p~~~ 315 (476)
..+++|.+.| +++|.++|++||+ ++|+|++|.++... ... . ..+.....+|+++++ |+ ++ .
T Consensus 267 v~~~~G~~~~~~~~l~~l~~l~~~~g~-----lli~DEv~~g~g~~-g~~~~~~~~gv~~~~Di~t~s--K~~l~----G 334 (472)
T 1ohv_A 267 IQSEGGDNHASDDFFRKLRDISRKHGC-----AFLVDEVQTGGGST-GKFWAHEHWGLDDPADVMTFS--KKMMT----G 334 (472)
T ss_dssp SBCTTTCBCCCHHHHHHHHHHHHHTTC-----EEEEECTTTTTTTT-SSSSGGGGGCCSSCCSEEEEC--GGGSS----E
T ss_pred CcCCCCCCCCCHHHHHHHHHHHHHhCC-----EEEEeCcccCCCCC-CCchhccccCCCCCCCEEEEc--ccccc----C
Confidence 6788999877 9999999999999 99999999753221 110 0 001111126877665 98 44 2
Q ss_pred eeEEeehhhhhhhcCCccccCCCCCcccCCCCChhHHHHH---HHHHHhChhcHHHHHHHHHHHHHHHHHHHHhc----C
Q 011842 316 GVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLW---YTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDA----G 388 (476)
Q Consensus 316 G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~~~~l~~~---~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----g 388 (476)
|+++ +.++ ..+ ...+. ..++.+ .++.+. ++++.+.. ++..++..+++++|+++|++. +
T Consensus 335 G~~~-~~~~-~~~--~~~~~---~~T~~~-----~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~ 399 (472)
T 1ohv_A 335 GFFH-KEEF-RPN--APYRI---FNTWLG-----DPSKNLLLAEVINIIKR---EDLLSNAAHAGKVLLTGLLDLQARYP 399 (472)
T ss_dssp EEEE-CGGG-SCS--SSSSS---CCSSSS-----CHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred CccC-chhh-ccc--ccccc---cCccCc-----cHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 6655 5443 111 11010 011111 133333 33443322 245677788888898888775 2
Q ss_pred C-eEeecCCeeEEEEecCCc---HHHhh-----ceeec-ccCCEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Q 011842 389 I-SAMLNELSSTVVFERPQD---EEFVR-----RWQLA-CQGNIAHVVVMPNVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 389 ~-~~~~~~~~~iv~f~~~~~---~~~~~-----~~~l~-~~~~~lRv~~~~~~T~edid~~~~~l~~~~~~ 449 (476)
. .....+...++.|..+.. ..+.+ ++.+. ...+.+|++++..+|++|||+++++|+++.++
T Consensus 400 ~~v~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~ 470 (472)
T 1ohv_A 400 QFISRVRGRGTFCSFDTPDESIRNKLISIARNKGVMLGGCGDKSIRFRPTLVFRDHHAHLFLNIFSDILAD 470 (472)
T ss_dssp TTCEEEEEETTEEEEECSSHHHHHHHHHHHHHTTEECEEETTTEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred CcEEeecCCceEEEEEeCChhHHHHHHHHHHHCCeEEecCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 1 111223345666665432 22222 33333 33579999999999999999999999987653
No 232
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.65 E-value=1e-14 Score=150.54 Aligned_cols=284 Identities=13% Similarity=0.099 Sum_probs=170.7
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEec-CCCchHHHHHHHH-----cCCeEEEEe
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYAS-RESHYSVFKAARM-----YRMECVKVD 212 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s-~~~H~S~~~~~~~-----~G~~v~~v~ 212 (476)
.++.++.+.+++++.-- ....|+++||+||..|++++|....+..|+.- ..-|......... .......+|
T Consensus 127 ~~~~~lae~l~~~~p~~---~~v~f~~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~p 203 (454)
T 4ao9_A 127 LLEGRLARLICERFPQI---EQLRFTNSGTEANLMALTAALHFTGRRKIVVFSGGYHGGVLGFGARPSPTTVPFDFLVLP 203 (454)
T ss_dssp SSHHHHHHHHHHHSTTC---SEEEEESSHHHHHHHHHHHHHHHHTCCEEEEETTCBCSTTCBBSSSBCTTSCCSEEEEEC
T ss_pred HHHHHHHHHHHHhCCCC---CEEEEeCchHHHHHHHHHHHHhcccCCeEEEEeCCcCCccccccccccCccCCCCcccCC
Confidence 44556667777777422 23899999999999999999875444555544 4444322111000 112355566
Q ss_pred CCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC----HHHHHHHHHHhCCCCCceEEEEecCccccccccccc
Q 011842 213 CLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD----LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKK 288 (476)
Q Consensus 213 ~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~----l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~ 288 (476)
.+ |++.+++.|++.......|++.-..+..|.+.| +++|.++|++||+ ++++|+++.|-.......
T Consensus 204 ~n-----d~~~l~~~l~~~~~~iAavIvEPv~g~~G~~~p~~~fL~~lr~lc~~~g~-----lLI~DEV~tGR~G~~~a~ 273 (454)
T 4ao9_A 204 YN-----DAQTARAQIERHGPEIAVVLVEPMQGASGCIPGQPDFLQALRESATQVGA-----LLVFDEVMTSRLAPHGLA 273 (454)
T ss_dssp TT-----CHHHHHHHHHHTGGGEEEEEECSEESTTTCEECCHHHHHHHHHHHHHHTC-----EEEEECTTGGGGSTTCHH
T ss_pred Cc-----hHHHHHHHHhhcCCceEEEEeccccCCCCccCCchhhHHHHHHHHhhcCC-----EEEEECCCcCCCccccch
Confidence 55 899999999987655566777655777788877 9999999999999 999999996422211100
Q ss_pred CCCCCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCc-cccCCCCCcccCCCCChhHHHHHHHHHHhChhcHH
Q 011842 289 APKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNV-EYLASRDATIMGSRNGHAPIFLWYTLNRKGYKGFQ 367 (476)
Q Consensus 289 ~~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~-~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g~~g~~ 367 (476)
. .+.+ ..|.+++. |.++.++++|+++.+.+.++.+.... .+.. ..|+.+ .+++..++++.+..-.-+
T Consensus 274 e-~~gv--~PDi~t~g--K~lggG~Piga~~~~~ei~~~~~~~~~~~~h--~~T~~g-----nPla~AAala~L~~l~~~ 341 (454)
T 4ao9_A 274 N-KLGI--RSDLTTLG--KYIGGGMSFGAFGGRADVMALFDPRTGPLAH--SGTFNN-----NVMTMAAGYAGLTKLFTP 341 (454)
T ss_dssp H-HHTC--CCSEEEEE--GGGGTTSSCEEEEECHHHHGGGCTTTCSCCC--CCTTTT-----CHHHHHHHHHHHHHTSCH
T ss_pred h-ccCC--CCcEEEec--cccCCCCcceeeeeHHHHHHHHhhccCCccc--cCCCCC-----CHHHHHHHHHHHHHHhcc
Confidence 0 0111 25888766 98988899999999999877664321 1111 112222 234444444333211114
Q ss_pred HHHHHHHHHHHHHHHHHHhc----CCeE-eecCCeeE-EEEecCC----------cHHH---------hhceeecccCCE
Q 011842 368 KEVQKCLRNAHYLKDRLLDA----GISA-MLNELSST-VVFERPQ----------DEEF---------VRRWQLACQGNI 422 (476)
Q Consensus 368 ~~~~~~~~~a~~l~~~L~~~----g~~~-~~~~~~~i-v~f~~~~----------~~~~---------~~~~~l~~~~~~ 422 (476)
+..++..++.++|+++|++. ++.. +...++.+ +.|...+ +..+ .++..+...+
T Consensus 342 ~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G~m~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~ll~~Gv~~~p~~-- 419 (454)
T 4ao9_A 342 EAAGALAERGEALRARLNALCANEGVAMQFTGIGSLMNAHFVQGDVRSSEDLAAVDGRLRQLLFFHLLNEDIYSSPRG-- 419 (454)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTBSCEEEEETTEEEEESCCSCCCSGGGGTTCCHHHHHHHHHHHHHTTEECCTTC--
T ss_pred ChhHHHHHHHHHHHHHHHHHHhhCCCCEEEeeeceEEEEEEecCCCCCHHHHHhhhHHHHHHHHHHHHHCCEEEcCCC--
Confidence 56677777888888887663 4321 11112211 1221111 1111 1222333322
Q ss_pred EEEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 011842 423 AHVVVMPNVTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 423 lRv~~~~~~T~edid~~~~~l~~~~~~~ 450 (476)
++.++.-+|++|||+++++|++++.+.
T Consensus 420 -~~~~s~~~T~~dId~~l~al~~~l~~~ 446 (454)
T 4ao9_A 420 -FVVLSLPLTDADIDRYVAAIGSFIGGH 446 (454)
T ss_dssp -EEECCTTCCHHHHHHHHHHHHHHHHHS
T ss_pred -CEEEeCCCCHHHHHHHHHHHHHHHHhc
Confidence 355667789999999999999998764
No 233
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.42 E-value=3e-17 Score=170.51 Aligned_cols=282 Identities=14% Similarity=0.063 Sum_probs=166.9
Q ss_pred HHHHHHHHHHHHHHcC-CCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchH-HHHHH---HHcCC--eEEE
Q 011842 138 RQFEVGVLDWFARLWE-LENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYS-VFKAA---RMYRM--ECVK 210 (476)
Q Consensus 138 ~~le~~~~~~la~l~g-~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S-~~~~~---~~~G~--~v~~ 210 (476)
.+.+.++.+.++++++ .+ ..++++|||+||..|+.++|....++.|++.+.+|.. ...+. ...|+ .+..
T Consensus 139 ~~~~~~Lae~L~~~~p~~~----~v~~~nSGseA~~~Aik~ar~~tgr~~ii~~~~~yHG~~~~~~sg~~~~g~~~~~~~ 214 (465)
T 2yky_A 139 TENEALFAEAVCDRFPSID----LVRFTNSGTEANLMALATATAITGRKTVLAFDGGYHGGLLNFASGHAPTNAPYHVVL 214 (465)
Confidence 3666777788888884 32 3889999999999999998754344666666555433 33222 12233 3344
Q ss_pred EeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccC----HHHHHHHHHHhCCCCCceEEEEecCccccccccc
Q 011842 211 VDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDD----LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFV 286 (476)
Q Consensus 211 v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~----l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~ 286 (476)
+|.+ |+++|+++|++...++.+|+++...+++|.+.| +++|.++|++||+ ++++|++|+ +.. .
T Consensus 215 ~~~~-----d~~~l~~~l~~~~~~~aavi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~-----llI~DEv~~-~r~--g 281 (465)
T 2yky_A 215 GVYN-----DVEGTADLLKRHGHDCAAILVEPMLGAGGCVPAERAFLDLLRAEASRCGA-----LLIFDEVMT-SRL--S 281 (465)
Confidence 4433 889999999753333446666655666897766 9999999999999 999999998 421 1
Q ss_pred ccCCCCCCcc-cccEEEEcCCCCCCCCCCceeEEeehhhhhhhcC---CccccCCCCCcccCCCCChhHHHHHHHHHHhC
Q 011842 287 KKAPKVSFKK-PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSS---NVEYLASRDATIMGSRNGHAPIFLWYTLNRKG 362 (476)
Q Consensus 287 ~~~~~~~~~~-~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~---~~~yl~~~~~~~~~sr~~~~~l~~~~~l~~~g 362 (476)
... .++... ..|++ ++.|+++.++++|++++++++++.+.. ...+.. .++.+. ++.+.+++..+.
T Consensus 282 ~~~-a~~~~gv~pDi~--t~sK~lg~G~piG~v~~~~~i~~~l~~~~~g~~~~~---~T~~~n-----pla~aAa~aaL~ 350 (465)
T 2yky_A 282 GGG-AQEMLGISADLT--TLGKYIGGGMSFGAFGGRRDLMERFDPARDGAFAHA---GTFNNN-----ILTMSAGHAALT 350 (465)
Confidence 110 011111 25665 456999988999999999887766543 111111 122222 333433333331
Q ss_pred hhcHHHHHHHHHHHHHHHHHHHHhc----CCeEeecCCeeEEEEecCC------------cHHHhhce---------eec
Q 011842 363 YKGFQKEVQKCLRNAHYLKDRLLDA----GISAMLNELSSTVVFERPQ------------DEEFVRRW---------QLA 417 (476)
Q Consensus 363 ~~g~~~~~~~~~~~a~~l~~~L~~~----g~~~~~~~~~~iv~f~~~~------------~~~~~~~~---------~l~ 417 (476)
.-.-+...++..++.++|+++|++. +.....+....++.+..++ +.+....+ .+.
T Consensus 351 ~l~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~g~G~~~~i~~~~~~~~~~~~~~~~d~~~~~~~~~~ll~~GV~v~ 430 (465)
T 2yky_A 351 QIYTRQAASDLSASGDRFRANLNRIAVENQAPLQFTGLGSLGTIHFSRAPIRSAGDVRAADQQLKELFFFHMLRKGIYLA 430 (465)
Confidence 1111346677778888888888775 2211122333444443322 00111111 111
Q ss_pred ccCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHH
Q 011842 418 CQGNIAHVVVMPNVTIDKLDDFLNELIENRSTW 450 (476)
Q Consensus 418 ~~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~ 450 (476)
..+. .. ++..+|++|||+++++|+++.+++
T Consensus 431 p~~~--~~-~s~~~t~edid~~l~~l~~~l~~~ 460 (465)
T 2yky_A 431 PRGM--YA-LSLEIADAGRDAFAEALADFIGEQ 460 (465)
Confidence 1110 11 455689999999999999887654
No 234
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=99.41 E-value=2.1e-10 Score=118.65 Aligned_cols=288 Identities=14% Similarity=0.069 Sum_probs=167.2
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCc-hHHHHHHHHcC------------
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESH-YSVFKAARMYR------------ 205 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H-~S~~~~~~~~G------------ 205 (476)
+.+.++.+.+.++...+. ....+|+++||+||-.|++.+|....+..|+.-+.+| .....+....+
T Consensus 107 ~~~~~lae~L~~~~p~~~-~~~v~f~~sGsEA~e~AlklAr~~t~r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~p~ 185 (456)
T 4atq_A 107 EGYVAVTEQLNRLTPGDH-AKRTVLFNSGAEAVENAVKVARLATGRDAVVAFDHAYHGRTNLTMALTAKAMPYKTNFGPF 185 (456)
T ss_dssp HHHHHHHHHHHHHSSCSS-CEEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSC
T ss_pred HHHHHHHHHHHHhCCCCC-CcEEEEeCChHHHHHHHHHHHhhhhcCCeEEEEecccCCccccccccccCccccccCCCCc
Confidence 555567788888875431 1247899999999999999999865566666655554 33222222221
Q ss_pred -CeEEEEeCCC-----C-CccCHHHHHHHHHc-----CCCCcEEEEEeeCCCccccccC----HHHHHHHHHHhCCCCCc
Q 011842 206 -MECVKVDCLI-----S-GEIDCADFKAKLLQ-----NKDKPAIINVNIGTTVKGAVDD----LDLVIQTLEESGFTQDR 269 (476)
Q Consensus 206 -~~v~~v~~~~-----~-g~~D~~~Le~~l~~-----~~~~p~~vv~t~gtt~tG~id~----l~~I~~ia~~~g~~~~~ 269 (476)
-.+..+|... . ..-+.+.+++.++. .......|++.-.....|.+.| +++|.++|++||+
T Consensus 186 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~gi---- 261 (456)
T 4atq_A 186 APEVYRMPMSYPFREENPEITGAEAAKRAITMIEKQIGGDQVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEKGI---- 261 (456)
T ss_dssp CSSEEEECCCCGGGCSSTTCCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTC----
T ss_pred cccceecccccccccCCCcccHHHHHHHHHHHHHHhhcCCceEEEEeccccCCCCccccchhhhHHHHHHHhhcCC----
Confidence 1355566431 1 12234444444432 2234456666544556676654 9999999999999
Q ss_pred eEEEEecCcccccccccccC-CCCCCcccccEEEEcCCCCCCCCCCceeEEeehhhhhhhcCCccccCCCCCcccCCCCC
Q 011842 270 FYIHCDGALFGLMMPFVKKA-PKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNG 348 (476)
Q Consensus 270 ~~lhvD~a~~g~~~~~~~~~-~~~~~~~~~Dsi~~s~hK~l~~p~~~G~l~~~~~~~~~l~~~~~yl~~~~~~~~~sr~~ 348 (476)
++++|+++.|+.-.+.-.. ..+.+ ..|.++++ |.++.+.++|.++.+++..+.+... . ...|+.+.
T Consensus 262 -llI~DEV~tG~GRtG~~~a~e~~gv--~PDivt~g--K~lggg~P~~av~~~~~i~~~~~~~--~---~~~Tf~gn--- 328 (456)
T 4atq_A 262 -VFIADEVQSGFCRTGEWFAVDHEGV--VPDIITMA--KGIAGGLPLSAITGRADLLDAVHPG--G---LGGTYGGN--- 328 (456)
T ss_dssp -EEEEECTTTTTTTTSSSSGGGGTTC--CCSEEEEC--GGGGTTSSCEEEEEEHHHHTTSCTT--S---SCCSSSSC---
T ss_pred -ceEecccccccCCccccccccccCC--CCchhhhh--hcccCcCCceeeEecHHHHhccccc--C---CCCCCCCC---
Confidence 9999999977422110000 00111 26988876 8788889999999999877655321 1 11233332
Q ss_pred hhHHHHHHH---HHHhChhcHHHHHHHHHHHHHHHHHHHHhc----CC---eE---eecCCeeE-EEEecCC----cHHH
Q 011842 349 HAPIFLWYT---LNRKGYKGFQKEVQKCLRNAHYLKDRLLDA----GI---SA---MLNELSST-VVFERPQ----DEEF 410 (476)
Q Consensus 349 ~~~l~~~~~---l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----g~---~~---~~~~~~~i-v~f~~~~----~~~~ 410 (476)
+++..++ |+.+..++ ..++..++.++|.++|++. +. .. +...+..+ +-|..+. +.++
T Consensus 329 --pla~aaala~L~~i~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~~~~~~v~~VRG~Gl~~giel~~~~~~~~~~~~ 403 (456)
T 4atq_A 329 --PVACAAALAAIDTMEQHD---LNGRARHIEELALGKLRELAAELSAGGGSVVGDIRGRGAMLAIELVQPGSKEPNAEL 403 (456)
T ss_dssp --HHHHHHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHHHHHHCC-----CEEEEEEETTEEEEEEBCTTSCCBCHHH
T ss_pred --hHHHHhhHHHHHHHhhcc---HHHHHHHHHHHHHHHHHHHHHhcccccCCceEEeeecceEEEEEEecCCCCCcCHHH
Confidence 3444444 44443333 4556666677777777653 11 00 11111111 1232221 1111
Q ss_pred ---------hhceee-cc--cCCEEEEEEcCCCCHHHHHHHHHHHHHHHHH
Q 011842 411 ---------VRRWQL-AC--QGNIAHVVVMPNVTIDKLDDFLNELIENRST 449 (476)
Q Consensus 411 ---------~~~~~l-~~--~~~~lRv~~~~~~T~edid~~~~~l~~~~~~ 449 (476)
.+++.+ ++ .++.+|+.....+|+++||.++++|+++++.
T Consensus 404 ~~~v~~~~~~~Gvl~~~~g~~~~~irl~PpL~it~~~id~~l~~l~~al~a 454 (456)
T 4atq_A 404 TKAVAAACLKEGVIILTCGTYGNVIRLLPPLVISDELLIDGLEVLAAAIKA 454 (456)
T ss_dssp HHHHHHHHHHTTEECEEECTTSCEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCEEEecCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 233333 22 3578998877788999999999999998764
No 235
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=99.37 E-value=1.5e-10 Score=120.24 Aligned_cols=297 Identities=15% Similarity=0.102 Sum_probs=169.8
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHHhh-----CC-CcEEEecCCC-chHHHHHHHHcCC-----
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGREV-----FP-DGILYASRES-HYSVFKAARMYRM----- 206 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~~~-----~p-~~~Vl~s~~~-H~S~~~~~~~~G~----- 206 (476)
+.+.++.+.|.++...+.+ ..+|+++||+||-.|++++|.. .+ +..|+.-+.+ |.....++...|-
T Consensus 111 ~~~~~lAe~L~~~~p~~~~--~v~f~~sGsEA~e~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~tg~~~~~~ 188 (473)
T 4e3q_A 111 DQTVMLSEKLVEVSPFDSG--RVFYTNSGSEANDTMVKMLWFLHAAEGKPQKRKILTRWNAYHGVTAVSASMTGKPYNSV 188 (473)
T ss_dssp HHHHHHHHHHHHHSSCSSC--EEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCGGGGG
T ss_pred HHHHHHHHHHHhhCCCCcc--EEEEeCchHHHHHHHHHHHHHHHHhcCCCCcceEEEeeceECCCccccccccccccccc
Confidence 5566778888888865433 3899999999999999998753 12 3345544444 4333333333221
Q ss_pred ------eEEEEeCC------CCCcc-------CHHHHHHHHHcC-CCCcEEEEEeeCCCccccccC----HHHHHHHHHH
Q 011842 207 ------ECVKVDCL------ISGEI-------DCADFKAKLLQN-KDKPAIINVNIGTTVKGAVDD----LDLVIQTLEE 262 (476)
Q Consensus 207 ------~v~~v~~~------~~g~~-------D~~~Le~~l~~~-~~~p~~vv~t~gtt~tG~id~----l~~I~~ia~~ 262 (476)
....++.. ..+.. ..++|++.|.+. .+....|++.-....-|.+.| +++|.++|++
T Consensus 189 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~ 268 (473)
T 4e3q_A 189 FGLPLPGFVHLTCPHYWRYGEEGETEEQFVARLARELEETIQREGADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRK 268 (473)
T ss_dssp GTCSCTTEEEECCCCHHHHSCTTCCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHH
T ss_pred cCCCCCcccccCCCcccccccccchhhHHHHHHHHHHHHHHHhhCCCceEEEEeCCccCCCCceeCCHHHHHHHHHHhcc
Confidence 23344332 11111 234566666543 334455666544555676644 8999999999
Q ss_pred hCCCCCceEEEEecCcccccccccccC-CCCCCcccccEEEEcCCCCCCCC-CCceeEEeehhhhhhhcCCccccC--CC
Q 011842 263 SGFTQDRFYIHCDGALFGLMMPFVKKA-PKVSFKKPIGSVSVSGHKFVGCP-MPCGVQITRMEHINVLSSNVEYLA--SR 338 (476)
Q Consensus 263 ~g~~~~~~~lhvD~a~~g~~~~~~~~~-~~~~~~~~~Dsi~~s~hK~l~~p-~~~G~l~~~~~~~~~l~~~~~yl~--~~ 338 (476)
||+ ++++|+++.|+--...-.. ..+.+ ..|.+++. |.++.+ .++|.++++++..+.+........ ..
T Consensus 269 ~gi-----lLI~DEV~tGfGRtG~~fa~e~~gv--~PDi~t~~--K~l~gG~~Pl~av~~~~~i~~~~~~~~~~~~~~~h 339 (473)
T 4e3q_A 269 YDI-----PVISDEVICGFGRTGNTWGCVTYDF--TPDAIISS--KNLTAGFFPMGAVILGPELSKRLETAIEAIEEFPH 339 (473)
T ss_dssp TTC-----CEEEECTTTSSSTTSSSCHHHHTTC--CCSEEEEC--GGGGTTSSCCEEEEECHHHHHHHHHHHHHHSCCCC
T ss_pred cce-----EEeccCccccCCcccchhHHHhcCC--CCChHHhc--ccccCCCCCcccccccHHHHHHhcccccccccccc
Confidence 999 9999999977521110000 00111 26888766 888777 799999999997665532111100 00
Q ss_pred CCcccCCCCChhHHHHHHHHHHhChhcHHHHHHHHHHHHHHHHHHHHhcC---Ce-EeecCCeeEEEEec--CC------
Q 011842 339 DATIMGSRNGHAPIFLWYTLNRKGYKGFQKEVQKCLRNAHYLKDRLLDAG---IS-AMLNELSSTVVFER--PQ------ 406 (476)
Q Consensus 339 ~~~~~~sr~~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~g---~~-~~~~~~~~iv~f~~--~~------ 406 (476)
..|+.+ .+++..++++.+..-.-++.+++..++.++|.++|+++. .. .+...+ .+..+.. +.
T Consensus 340 g~T~~G-----npla~Aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~v~~vRG~G-l~~gielv~~~~~~~~~ 413 (473)
T 4e3q_A 340 GFTASG-----HPVGCAIALKAIDVVMNEGLAENVRRLAPRFEERLKHIAERPNIGEYRGIG-FMWALEAVKDKASKTPF 413 (473)
T ss_dssp CCTTTT-----CHHHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEET-TEEEEEECSBTTTTBCC
T ss_pred CCCCCC-----CcchhhhhhhhhhhhccccHHHHHHHHHHHHHHHHHHHhcCCCeeEEeecc-eEEEEEEecCccccccc
Confidence 112222 234444444443211113355666778888888887742 11 111111 1222221 10
Q ss_pred c------HHH-----hhceeecccCCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHh
Q 011842 407 D------EEF-----VRRWQLACQGNIAHVVVMPNVTIDKLDDFLNELIENRSTWYE 452 (476)
Q Consensus 407 ~------~~~-----~~~~~l~~~~~~lRv~~~~~~T~edid~~~~~l~~~~~~~~~ 452 (476)
+ ..+ .+++.+...++.+|+.....+|+++||.+++.|++++++..+
T Consensus 414 ~~~~~~~~~~~~~~~~~Gll~~~~g~~i~l~PPL~it~~eid~~~~~l~~al~~v~a 470 (473)
T 4e3q_A 414 DGNLSVSERIANTCTDLGLICRPLGQSVVLCPPFILTEAQMDEMFDKLEKALDKVFA 470 (473)
T ss_dssp CGGGCHHHHHHHHHHHTTEECEEETTEEEECCCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHCCcEEEecCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 0 011 123334445678887766678999999999999999887654
No 236
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=99.34 E-value=1.6e-11 Score=135.95 Aligned_cols=297 Identities=8% Similarity=-0.026 Sum_probs=159.5
Q ss_pred HHHHHHHHHHHHHcCCCCCcccEEEcCCchhHHHHHHHHHH-hh--C------------CCcEEE-ecCCCchHHHHHHH
Q 011842 139 QFEVGVLDWFARLWELENNEYWGYITNCGTEGNLHGILVGR-EV--F------------PDGILY-ASRESHYSVFKAAR 202 (476)
Q Consensus 139 ~le~~~~~~la~l~g~~~~~~~g~~t~ggt~An~~al~aa~-~~--~------------p~~~Vl-~s~~~H~S~~~~~~ 202 (476)
+...++.+.|+++.+-+. -...+|+++||+||-.|+.+++ .. . .+..|| .....|.+...++.
T Consensus 424 ~~~~~Lae~L~~~~p~~~-l~~vff~~SGSeA~E~AlK~A~r~~~~~~g~~~~~~~~~~~r~~iI~~~~syHG~T~gals 502 (831)
T 4a0g_A 424 EPALKCAELLLDGVGKGW-ASRVYFSDNGSTAIEIALKMAFRKFCVDHNFCEATEEEKHIVVKVIALRGSYHGDTLGAME 502 (831)
T ss_dssp HHHHHHHHHHHHTTTTTT-CCEEEEESSHHHHHHHHHHHHHHHHHHTTTC---------CCEEEEEETTCCCCSSHHHHH
T ss_pred HHHHHHHHHHHHhCCCCC-CCEEEECCChhHHHHHHHHHHHHHHHhhcCCCccccccccCccEEEEecCCcccCceeeee
Confidence 444467777888776320 1238999999999999999984 22 1 123444 45555666666655
Q ss_pred HcCCe---------------E-------------EEEeCCCCC---------ccC------------------HHHHHHH
Q 011842 203 MYRME---------------C-------------VKVDCLISG---------EID------------------CADFKAK 227 (476)
Q Consensus 203 ~~G~~---------------v-------------~~v~~~~~g---------~~D------------------~~~Le~~ 227 (476)
..|.. . ..++..... .-| .++|++.
T Consensus 503 ~tg~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~ 582 (831)
T 4a0g_A 503 AQAPSPYTGFLQQPWYTGRGLFLDPPTVFLSNGSWNISLPESFSEIAPEYGTFTSRDEIFDKSRDASTLARIYSAYLSKH 582 (831)
T ss_dssp TSCCCGGGSTTTCTTCCCCEEEECCCEEEEETTEEEEECCTTSCCCCSSTTEESCHHHHHCGGGGGSHHHHHHHHHHHHH
T ss_pred ccCccccccccccccccCCccccCCccccccCCceEecCCccccccccccccccchhhhhcccccchhhhHHHHHHHHHH
Confidence 54421 0 112221100 001 2677777
Q ss_pred HHc-----CCCCcEEEEEeeC-CCccccccC----HHHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCccc
Q 011842 228 LLQ-----NKDKPAIINVNIG-TTVKGAVDD----LDLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFKKP 297 (476)
Q Consensus 228 l~~-----~~~~p~~vv~t~g-tt~tG~id~----l~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~~~ 297 (476)
|++ .......|++... .+..|.+.+ +++|.++|++||+ ++++|+++.|+............+ -.
T Consensus 583 l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gi-----lLI~DEV~tGfGRtG~~fa~e~~g-v~ 656 (831)
T 4a0g_A 583 LQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKI-----PVIFDEVFTGFWRLGVETTTELLG-CK 656 (831)
T ss_dssp C---------CEEEEEEECCSEETTTTSEEECHHHHHHHHHHHHHTTC-----CEEEECTTTTTTTTSBSSTHHHHS-SC
T ss_pred HHhhhhhcCCCcEEEEEEecccccCCCCccCCHHHHHHHHHHHHHcCC-----eEEEEcCccccccCCCchhhHhcC-CC
Confidence 763 2333445555432 456666654 9999999999999 999999987642211000000001 12
Q ss_pred ccEEEEcCCCCCCCC-CCceeEEeehhhhhhhcCCccc-cCCCCCcccCCCCChhHHHHHHHHHH---hChhcHHHHH--
Q 011842 298 IGSVSVSGHKFVGCP-MPCGVQITRMEHINVLSSNVEY-LASRDATIMGSRNGHAPIFLWYTLNR---KGYKGFQKEV-- 370 (476)
Q Consensus 298 ~Dsi~~s~hK~l~~p-~~~G~l~~~~~~~~~l~~~~~y-l~~~~~~~~~sr~~~~~l~~~~~l~~---~g~~g~~~~~-- 370 (476)
.|+++++ |.++++ +++|++++++++.+.+...... .+....|+.+ .++...++++. +..+.+.+.+
T Consensus 657 PDiitls--K~L~gG~~Plgav~~~~~i~~~~~~~~~~~~~~hg~T~~g-----~Pla~Aaala~L~~i~~~~l~~~~~~ 729 (831)
T 4a0g_A 657 PDIACFA--KLLTGGMVPLAVTLATDAVFDSFSGDSKLKALLHGHSYSA-----HAMGCATAAKAIQWFKDPETNHNITS 729 (831)
T ss_dssp CSEEEEC--GGGGTTSSCCEEEEECHHHHHTTCSSCGGGSCCCCCTTTT-----CHHHHHHHHHHHHHHHCTTTCTTBCT
T ss_pred CcEEEEe--cccccCccCcEEEEECHHHHHHHhcccccccceeecCCcc-----cHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 5877654 988877 6899999999987766432110 0000112222 23444444433 3222221111
Q ss_pred --HHHHH-HHHHHHHHHHhcCCeEeecCCeeEEEEecCCc-----------HHH-----hhceeecccCCEEEEEEcCCC
Q 011842 371 --QKCLR-NAHYLKDRLLDAGISAMLNELSSTVVFERPQD-----------EEF-----VRRWQLACQGNIAHVVVMPNV 431 (476)
Q Consensus 371 --~~~~~-~a~~l~~~L~~~g~~~~~~~~~~iv~f~~~~~-----------~~~-----~~~~~l~~~~~~lRv~~~~~~ 431 (476)
++..+ +.+.+.+.+++.+..........++.+....+ ..+ .+++.+...++.+|++..+.+
T Consensus 730 ~~~~l~~~l~~~l~~~l~~~~~v~~vrg~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gv~v~p~g~~lrl~pp~~~ 809 (831)
T 4a0g_A 730 QGKTLRELWDEELVQQISSHSAVQRVVVIGTLFALELKADASNSGYASLYAKSLLIMLREDGIFTRPLGNVIYLMCGPCT 809 (831)
T ss_dssp TSSBBCCCSCHHHHHHHHHSTTEEEEEEETTEEEEEEC---------CHHHHHHHHHHHHTTEECCCBTTEEEEECCTTC
T ss_pred HHHHHHHHHHHHHHHHHhhCCCceeEeecccEEEEEEecCccccccchHHHHHHHHHHHHCCcEEEecCCEEEEECCCCC
Confidence 11110 11234455556554322222222333332110 111 234444455789999999999
Q ss_pred CHHHHHHHHHHHHHHHHH
Q 011842 432 TIDKLDDFLNELIENRST 449 (476)
Q Consensus 432 T~edid~~~~~l~~~~~~ 449 (476)
|++|||+++++|.++.++
T Consensus 810 t~e~id~~~~~l~~~l~~ 827 (831)
T 4a0g_A 810 SPEICRRLLTKLYKRLGE 827 (831)
T ss_dssp CHHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 999999999999988654
No 237
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=58.65 E-value=39 Score=31.14 Aligned_cols=97 Identities=11% Similarity=0.051 Sum_probs=49.4
Q ss_pred HcCCCCCcccEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHH---HHcCCeEEEEeCCCCCccCHHHHHHH
Q 011842 151 LWELENNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAA---RMYRMECVKVDCLISGEIDCADFKAK 227 (476)
Q Consensus 151 l~g~~~~~~~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~---~~~G~~v~~v~~~~~g~~D~~~Le~~ 227 (476)
+|.++.. .++.+||+.++=.++.-..-. .|..|++....-....+.+ +..|.++..+.+|-...-+++.+-+.
T Consensus 4 ~f~L~gK---valVTGas~GIG~aia~~la~-~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~ 79 (255)
T 4g81_D 4 LFDLTGK---TALVTGSARGLGFAYAEGLAA-AGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSK 79 (255)
T ss_dssp TTCCTTC---EEEETTCSSHHHHHHHHHHHH-TTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHH
T ss_pred CcCCCCC---EEEEeCCCcHHHHHHHHHHHH-CCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHH
Confidence 4555432 455557766665444332221 4555555444443333333 33477888887764322233333333
Q ss_pred HHcCCCCcEEEEEeeCCCcccccc
Q 011842 228 LLQNKDKPAIINVNIGTTVKGAVD 251 (476)
Q Consensus 228 l~~~~~~p~~vv~t~gtt~tG~id 251 (476)
+.+.-.+.-+++-|+|....+.+.
T Consensus 80 ~~~~~G~iDiLVNNAG~~~~~~~~ 103 (255)
T 4g81_D 80 LDAEGIHVDILINNAGIQYRKPMV 103 (255)
T ss_dssp HHHTTCCCCEEEECCCCCCCCCGG
T ss_pred HHHHCCCCcEEEECCCCCCCCChh
Confidence 333333445777777776666654
No 238
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=50.22 E-value=33 Score=31.98 Aligned_cols=88 Identities=9% Similarity=-0.019 Sum_probs=48.8
Q ss_pred EEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccCHHHHHHHHH---cCCCCcEE
Q 011842 161 GYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCADFKAKLL---QNKDKPAI 237 (476)
Q Consensus 161 g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~~~Le~~l~---~~~~~p~~ 237 (476)
.++.+||+.++=.++.-..-. .|..|++....-....+.++-+|.++..+.+|-. |.+++++.++ +.-.+.-+
T Consensus 31 valVTGas~GIG~aiA~~la~-~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~---~~~~v~~~~~~~~~~~G~iDi 106 (273)
T 4fgs_A 31 IAVITGATSGIGLAAAKRFVA-EGARVFITGRRKDVLDAAIAEIGGGAVGIQADSA---NLAELDRLYEKVKAEAGRIDV 106 (273)
T ss_dssp EEEEESCSSHHHHHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTT---CHHHHHHHHHHHHHHHSCEEE
T ss_pred EEEEeCcCCHHHHHHHHHHHH-CCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCC---CHHHHHHHHHHHHHHcCCCCE
Confidence 445556666665443332221 4555554444445566677777888888877643 4455554443 22233446
Q ss_pred EEEeeCCCccccccC
Q 011842 238 INVNIGTTVKGAVDD 252 (476)
Q Consensus 238 vv~t~gtt~tG~id~ 252 (476)
++-|+|....+.+.+
T Consensus 107 LVNNAG~~~~~~~~~ 121 (273)
T 4fgs_A 107 LFVNAGGGSMLPLGE 121 (273)
T ss_dssp EEECCCCCCCCCTTS
T ss_pred EEECCCCCCCCChhh
Confidence 767777766666543
No 239
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=45.27 E-value=80 Score=25.36 Aligned_cols=42 Identities=17% Similarity=0.205 Sum_probs=27.7
Q ss_pred CHHHHHHHHHc----C----CCCcEEEEEeeCCCccccccCHHHHHHHHHHhCC
Q 011842 220 DCADFKAKLLQ----N----KDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGF 265 (476)
Q Consensus 220 D~~~Le~~l~~----~----~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~ 265 (476)
|++.+.+.|.+ . ...|+++-+..-. ...++.+|.++++++|+
T Consensus 26 d~~~l~~~L~~ki~~aP~FF~~aPVVlDl~~l~----~~~dl~~L~~~l~~~gl 75 (120)
T 3ghf_A 26 EPEVIRQALEDKIAQAPAFLKHAPVVINVSGLE----SPVNWPELHKIVTSTGL 75 (120)
T ss_dssp CHHHHHHHHHHHHHHSHHHHTTCEEEEEEEECC----SSCCHHHHHHHHHTTTC
T ss_pred CHHHHHHHHHHHHHhChHhhCCCcEEEEccccC----ChHHHHHHHHHHHHcCC
Confidence 66666666543 2 3456666554332 23679999999999998
No 240
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=41.55 E-value=1.2e+02 Score=27.18 Aligned_cols=76 Identities=11% Similarity=0.118 Sum_probs=42.0
Q ss_pred HHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccCHHHHHHHHHc---CCCCcEEEEEeeCCCcc
Q 011842 171 NLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCADFKAKLLQ---NKDKPAIINVNIGTTVK 247 (476)
Q Consensus 171 n~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~~~Le~~l~~---~~~~p~~vv~t~gtt~t 247 (476)
++.++..+++...+-.++.....-..+...+.++|+++..+... +.+++++.+.+ .+- .+|+. .
T Consensus 95 il~aL~~a~~~~~kIavVg~~~~~~~~~~i~~ll~~~i~~~~~~-----~~ee~~~~i~~l~~~G~--~vVVG---~--- 161 (225)
T 2pju_A 95 VLQFLAKAGKLTSSIGVVTYQETIPALVAFQKTFNLRLDQRSYI-----TEEDARGQINELKANGT--EAVVG---A--- 161 (225)
T ss_dssp HHHHHHHTTCTTSCEEEEEESSCCHHHHHHHHHHTCCEEEEEES-----SHHHHHHHHHHHHHTTC--CEEEE---S---
T ss_pred HHHHHHHHHhhCCcEEEEeCchhhhHHHHHHHHhCCceEEEEeC-----CHHHHHHHHHHHHHCCC--CEEEC---C---
Confidence 34455555543333334444444556677788888887777665 45555555543 221 13322 1
Q ss_pred ccccCHHHHHHHHHHhCC
Q 011842 248 GAVDDLDLVIQTLEESGF 265 (476)
Q Consensus 248 G~id~l~~I~~ia~~~g~ 265 (476)
.-..++|+++|+
T Consensus 162 ------~~~~~~A~~~Gl 173 (225)
T 2pju_A 162 ------GLITDLAEEAGM 173 (225)
T ss_dssp ------HHHHHHHHHTTS
T ss_pred ------HHHHHHHHHcCC
Confidence 123778888887
No 241
>1j0a_A 1-aminocyclopropane-1-carboxylate deaminase; PLP dependent, lyase; HET: PLP; 2.50A {Pyrococcus horikoshii} SCOP: c.79.1.1 PDB: 1j0b_A*
Probab=39.52 E-value=79 Score=29.94 Aligned_cols=54 Identities=15% Similarity=0.035 Sum_probs=34.5
Q ss_pred EEEcCCchhHHHHH-HHH-HHhhCCCcEEEecCCC-chHHHHHHHHcCCeEEEEeCC
Q 011842 161 GYITNCGTEGNLHG-ILV-GREVFPDGILYASRES-HYSVFKAARMYRMECVKVDCL 214 (476)
Q Consensus 161 g~~t~ggt~An~~a-l~a-a~~~~p~~~Vl~s~~~-H~S~~~~~~~~G~~v~~v~~~ 214 (476)
.++|.|+|.+|... +.+ ++...=+.+|++++.. -..-...++.+|++++.++.+
T Consensus 72 ~vv~~G~ssGN~g~alA~~a~~~G~~~~iv~p~~~~~~~k~~~~~~~GA~v~~~~~~ 128 (325)
T 1j0a_A 72 VVITVGAVHSNHAFVTGLAAKKLGLDAILVLRGKEELKGNYLLDKIMGIETRVYDAK 128 (325)
T ss_dssp EEEEECCTTCHHHHHHHHHHHHTTCEEEEEEESCCCSCHHHHHHHHTTCEEEEESCC
T ss_pred EEEEcCCcchHHHHHHHHHHHHhCCcEEEEECCCCCCCchHHHHHHCCCEEEEeCcc
Confidence 67886667776632 222 2221223567777766 455667888999999998864
No 242
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=39.51 E-value=95 Score=27.12 Aligned_cols=49 Identities=8% Similarity=-0.016 Sum_probs=28.7
Q ss_pred CchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCC
Q 011842 166 CGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCL 214 (476)
Q Consensus 166 ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~ 214 (476)
-+..=++.++..+++...+-.++.....-......+.++|.++..+..+
T Consensus 78 ~s~~Dil~al~~a~~~~~kIavvg~~~~~~~~~~~~~ll~~~i~~~~~~ 126 (196)
T 2q5c_A 78 VTRFDTMRAVYNAKRFGNELALIAYKHSIVDKHEIEAMLGVKIKEFLFS 126 (196)
T ss_dssp CCHHHHHHHHHHHGGGCSEEEEEEESSCSSCHHHHHHHHTCEEEEEEEC
T ss_pred CCHhHHHHHHHHHHhhCCcEEEEeCcchhhHHHHHHHHhCCceEEEEeC
Confidence 3334455666667664333334444444455677788888887777665
No 243
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=35.54 E-value=1.1e+02 Score=27.89 Aligned_cols=86 Identities=15% Similarity=0.035 Sum_probs=41.8
Q ss_pred EEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccCHHHHHHHHHc---CCCCcEE
Q 011842 161 GYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCADFKAKLLQ---NKDKPAI 237 (476)
Q Consensus 161 g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~~~Le~~l~~---~~~~p~~ 237 (476)
.++.+||+.++=.++.-.... .|..|++...........++.++.++..+..|-. |.+.+++.+++ .-.++-+
T Consensus 29 ~vlVTGas~gIG~aia~~la~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~---d~~~v~~~~~~~~~~~g~iD~ 104 (266)
T 3grp_A 29 KALVTGATGGIGEAIARCFHA-QGAIVGLHGTREDKLKEIAADLGKDVFVFSANLS---DRKSIKQLAEVAEREMEGIDI 104 (266)
T ss_dssp EEEESSTTSHHHHHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTT---SHHHHHHHHHHHHHHHTSCCE
T ss_pred EEEEeCCCcHHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecC---CHHHHHHHHHHHHHHcCCCCE
Confidence 444456665554333222111 4445544444444555556666777777777633 55555555442 2123346
Q ss_pred EEEeeCCCccccc
Q 011842 238 INVNIGTTVKGAV 250 (476)
Q Consensus 238 vv~t~gtt~tG~i 250 (476)
++-+++.+..+.+
T Consensus 105 lvnnAg~~~~~~~ 117 (266)
T 3grp_A 105 LVNNAGITRDGLF 117 (266)
T ss_dssp EEECCCCC-----
T ss_pred EEECCCCCCCCCc
Confidence 7667776554444
No 244
>2ab1_A Hypothetical protein; HS.95870, DUF498, structural genomics, protein structure INI PSI, center for eukaryotic structural genomics, CESG; 2.59A {Homo sapiens} SCOP: c.103.1.1 PDB: 2q4q_A
Probab=35.24 E-value=66 Score=25.97 Aligned_cols=44 Identities=16% Similarity=0.238 Sum_probs=32.7
Q ss_pred CccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCC
Q 011842 217 GEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGF 265 (476)
Q Consensus 217 g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~ 265 (476)
..+++++|+..+++... ++++ ||...+.+.+-+++.+..+++|+
T Consensus 47 ~~l~~~~l~~ll~~~~e---vlii--GtG~~~~~~~~~~~~~~l~~~gI 90 (122)
T 2ab1_A 47 PGVQPADVKEVVEKGVQ---TLVI--GRGMSEALKVPSSTVEYLKKHGI 90 (122)
T ss_dssp SCCCHHHHHHHHTTCCS---EEEE--EECSSCCSCCCHHHHHHHHHTTC
T ss_pred hHCCHHHHHHHhhCCCC---EEEE--CCCCCCccCCCHHHHHHHHHcCC
Confidence 35789999999886544 6666 55555665455888999999998
No 245
>2qv5_A AGR_C_5032P, uncharacterized protein ATU2773; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Agrobacterium tumefaciens str}
Probab=34.97 E-value=1.1e+02 Score=28.39 Aligned_cols=79 Identities=14% Similarity=0.119 Sum_probs=51.6
Q ss_pred EEecCCCc-hHHHHHHHHcCCe-EEEEeCCCCC-------------ccCHHHHHHHHHcC-CCCcEEEEEe--eCCCccc
Q 011842 187 LYASRESH-YSVFKAARMYRME-CVKVDCLISG-------------EIDCADFKAKLLQN-KDKPAIINVN--IGTTVKG 248 (476)
Q Consensus 187 Vl~s~~~H-~S~~~~~~~~G~~-v~~v~~~~~g-------------~~D~~~Le~~l~~~-~~~p~~vv~t--~gtt~tG 248 (476)
-+.+...| ..+.+.++..|-+ +.-+|..+.+ .++.+++++.|... ...|-++-+| .|+-.|.
T Consensus 60 Ai~P~~p~~~~~a~~A~~~G~EvllHlPMep~~~p~~~~gp~~L~~~~s~~ei~~~l~~al~~vP~a~GvnNHmGS~~T~ 139 (261)
T 2qv5_A 60 GFAASGNSLQRWMQDARREGHEILLQIPLEPFGYPGTNPGPDTLLAGDPAKVNIDRLHRSMAKITNYTGVMNYLGGRFLA 139 (261)
T ss_dssp EEETTCSSHHHHHHHHHHHTCCEEEEEEECCTTTTTSCCCTTCBCTTSCHHHHHHHHHHHHTTCCCCSEEEEEECTTGGG
T ss_pred EECCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCcCcCcCCCCHHHHHHHHHHHHHHCCCcEEEecccccchhc
Confidence 33443333 3456677777876 3445554211 37889998888754 3344455454 5677777
Q ss_pred cccCHHHHHHHHHHhCC
Q 011842 249 AVDDLDLVIQTLEESGF 265 (476)
Q Consensus 249 ~id~l~~I~~ia~~~g~ 265 (476)
.....+.+.+.++++|+
T Consensus 140 ~~~~M~~vm~~L~~~gL 156 (261)
T 2qv5_A 140 EQSALEPVMRDIGKRGL 156 (261)
T ss_dssp CHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHCCC
Confidence 77889999999999997
No 246
>1v8a_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, structural genomics, riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} PDB: 3hpd_A
Probab=30.38 E-value=1.7e+02 Score=26.80 Aligned_cols=65 Identities=17% Similarity=0.061 Sum_probs=40.1
Q ss_pred HHHHHHcCCeEEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecC
Q 011842 198 FKAARMYRMECVKVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGA 277 (476)
Q Consensus 198 ~~~~~~~G~~v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a 277 (476)
.+..-..|+..+... +++.+++.+.... .+++..|.-..-.++-+..+.+.+++++. .+++|..
T Consensus 31 an~~la~gasp~M~~-------~~~e~~~~~~~~d----alvi~~G~~~~~~~~~~~~~~~~a~~~~~-----pvVlDpv 94 (265)
T 1v8a_A 31 ANALLALGASPVMAH-------AEEELEEMIRLAD----AVVINIGTLDSGWRRSMVKATEIANELGK-----PIVLDPV 94 (265)
T ss_dssp HHHHHHHTCEEEECC-------CTTTHHHHHHHCS----EEEEECTTCCHHHHHHHHHHHHHHHHHTC-----CEEEECT
T ss_pred HHHHHhcCCCccccC-------CHHHHHHHHHHCC----EEEEEECCCCHHHHHHHHHHHHHHHHcCC-----cEEEcCc
Confidence 344445588766543 3456666666543 66676665311122345667778889999 8999987
Q ss_pred c
Q 011842 278 L 278 (476)
Q Consensus 278 ~ 278 (476)
-
T Consensus 95 ~ 95 (265)
T 1v8a_A 95 G 95 (265)
T ss_dssp T
T ss_pred c
Confidence 3
No 247
>3ecs_A Translation initiation factor EIF-2B subunit alpha; eukaryotic translation initiation factor 2balpha (EIF2balpha); 2.65A {Homo sapiens}
Probab=30.01 E-value=3.6e+02 Score=25.48 Aligned_cols=95 Identities=9% Similarity=-0.038 Sum_probs=55.2
Q ss_pred cEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCc--hH--HHHHHHHcCCeEEEEeCCCCCccCHHHHHHHHHcCCCCc
Q 011842 160 WGYITNCGTEGNLHGILVGREVFPDGILYASRESH--YS--VFKAARMYRMECVKVDCLISGEIDCADFKAKLLQNKDKP 235 (476)
Q Consensus 160 ~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H--~S--~~~~~~~~G~~v~~v~~~~~g~~D~~~Le~~l~~~~~~p 235 (476)
..++|.|.+...+..+..+.+....-.|++.+..- .. ..+-....|+.+..++-+ .+-..+.+-.
T Consensus 123 ~~ILTh~~S~tv~~~l~~A~~~gk~~~V~v~EsrP~~qG~~la~~L~~~gI~vtli~Ds--------a~~~~m~~vd--- 191 (315)
T 3ecs_A 123 ATILTHAYSRVVLRVLEAAVAAKKRFSVYVTESQPDLSGKKMAKALCHLNVPVTVVLDA--------AVGYIMEKAD--- 191 (315)
T ss_dssp EEEEECSCCHHHHHHHHHHHTTTCCEEEEEECCTTTTHHHHHHHHHHTTTCCEEEECGG--------GHHHHGGGCS---
T ss_pred CEEEEcCCcHHHHHHHHHHHHcCCeEEEEEecCCCcchHHHHHHHHHHcCCCEEEEehh--------HHHHHHHhCC---
Confidence 47888888887777777776544556777766432 11 222233348888877632 2222333222
Q ss_pred EEEEEeeCCCcccccc-C--HHHHHHHHHHhCC
Q 011842 236 AIINVNIGTTVKGAVD-D--LDLVIQTLEESGF 265 (476)
Q Consensus 236 ~~vv~t~gtt~tG~id-~--l~~I~~ia~~~g~ 265 (476)
.+++....-...|.+. . -..++-+|+.||+
T Consensus 192 ~VivGAd~i~~nG~v~nkiGT~~iAl~Ak~~~v 224 (315)
T 3ecs_A 192 LVIVGAEGVVENGGIINKIGTNQMAVCAKAQNK 224 (315)
T ss_dssp EEEEECSEECTTSCEEEETTHHHHHHHHHHTTC
T ss_pred EEEECceEEecCCCeeehhhhHHHHHHHHHhCC
Confidence 2444444444455543 2 3578889999999
No 248
>2nly_A BH1492 protein, divergent polysaccharide deacetylase hypothetical; PFAM04748, structural PSI, protein structure initiative; 2.50A {Bacillus halodurans} SCOP: c.6.2.7
Probab=28.57 E-value=92 Score=28.49 Aligned_cols=48 Identities=13% Similarity=0.360 Sum_probs=34.5
Q ss_pred ccCHHHHHHHHHcC-CCCcEEEEEe--eCCCccccccCHHHHHHHHHHhCC
Q 011842 218 EIDCADFKAKLLQN-KDKPAIINVN--IGTTVKGAVDDLDLVIQTLEESGF 265 (476)
Q Consensus 218 ~~D~~~Le~~l~~~-~~~p~~vv~t--~gtt~tG~id~l~~I~~ia~~~g~ 265 (476)
.++.+++++.|... ...|-++-+| .|+-.|......+.+.+.++++|+
T Consensus 79 ~~s~~ei~~~l~~al~~vP~a~GvnNHmGS~~T~~~~~m~~vm~~l~~~gL 129 (245)
T 2nly_A 79 NLSVGEVKSRVRKAFDDIPYAVGLNNHMGSKIVENEKIMRAILEVVKEKNA 129 (245)
T ss_dssp TCCHHHHHHHHHHHHHHSTTCCEEEEEECTTGGGCHHHHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHHHHHCCCcEEEecccccchhcCHHHHHHHHHHHHHCCC
Confidence 57788888877653 1223344444 567778778889999999999997
No 249
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=26.67 E-value=1.3e+02 Score=26.76 Aligned_cols=83 Identities=16% Similarity=0.014 Sum_probs=42.9
Q ss_pred EEcCCchhHHHHHH--HHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccCHHHHHHHHHc---CCCCcE
Q 011842 162 YITNCGTEGNLHGI--LVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCADFKAKLLQ---NKDKPA 236 (476)
Q Consensus 162 ~~t~ggt~An~~al--~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~~~Le~~l~~---~~~~p~ 236 (476)
++.+||+.++=.++ ..+. .|..|++.........+.+..++.++..+.+|-. |.+.+++.+++ ....+-
T Consensus 9 vlVTGas~gIG~a~a~~l~~---~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~---~~~~v~~~~~~~~~~~g~id 82 (247)
T 3rwb_A 9 ALVTGAAQGIGKAIAARLAA---DGATVIVSDINAEGAKAAAASIGKKARAIAADIS---DPGSVKALFAEIQALTGGID 82 (247)
T ss_dssp EEEETTTSHHHHHHHHHHHH---TTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTT---CHHHHHHHHHHHHHHHSCCS
T ss_pred EEEECCCCHHHHHHHHHHHH---CCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCC---CHHHHHHHHHHHHHHCCCCC
Confidence 44445555543333 2232 4555555444444555555556777777776632 55555555542 212233
Q ss_pred EEEEeeCCCccccc
Q 011842 237 IINVNIGTTVKGAV 250 (476)
Q Consensus 237 ~vv~t~gtt~tG~i 250 (476)
+++-+++....+.+
T Consensus 83 ~lv~nAg~~~~~~~ 96 (247)
T 3rwb_A 83 ILVNNASIVPFVAW 96 (247)
T ss_dssp EEEECCCCCCCCCG
T ss_pred EEEECCCCCCCCCc
Confidence 66667776555544
No 250
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=26.55 E-value=1.1e+02 Score=27.46 Aligned_cols=85 Identities=9% Similarity=0.060 Sum_probs=42.3
Q ss_pred EEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccCHHHHHHHHH---cCCCCcEE
Q 011842 161 GYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCADFKAKLL---QNKDKPAI 237 (476)
Q Consensus 161 g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~~~Le~~l~---~~~~~p~~ 237 (476)
.++| ||+.++=.++.-.... .|..|++.........+..+.++.++..+..|-. |.+.+++.++ +.-..+-+
T Consensus 11 ~lVT-Gas~gIG~a~a~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~---~~~~v~~~~~~~~~~~g~id~ 85 (255)
T 4eso_A 11 AIVI-GGTHGMGLATVRRLVE-GGAEVLLTGRNESNIARIREEFGPRVHALRSDIA---DLNEIAVLGAAAGQTLGAIDL 85 (255)
T ss_dssp EEEE-TCSSHHHHHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTT---CHHHHHHHHHHHHHHHSSEEE
T ss_pred EEEE-CCCCHHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCC---CHHHHHHHHHHHHHHhCCCCE
Confidence 4444 5555544333222111 3444444433444555555556767777777632 5555555443 22223446
Q ss_pred EEEeeCCCccccc
Q 011842 238 INVNIGTTVKGAV 250 (476)
Q Consensus 238 vv~t~gtt~tG~i 250 (476)
++-+.+....+.+
T Consensus 86 lv~nAg~~~~~~~ 98 (255)
T 4eso_A 86 LHINAGVSELEPF 98 (255)
T ss_dssp EEECCCCCCCBCG
T ss_pred EEECCCCCCCCCh
Confidence 6666665554444
No 251
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=26.35 E-value=2e+02 Score=25.04 Aligned_cols=61 Identities=10% Similarity=0.041 Sum_probs=35.1
Q ss_pred EEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccc
Q 011842 186 ILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAV 250 (476)
Q Consensus 186 ~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~i 250 (476)
+++++. .-....+....++.++..+..|- -|.+.+++.+++-...+-+++-+.+....+.+
T Consensus 28 V~~~~r-~~~~~~~~~~~~~~~~~~~~~D~---~~~~~v~~~~~~~~~~~d~lv~~Ag~~~~~~~ 88 (230)
T 3guy_A 28 TYLTGR-SESKLSTVTNCLSNNVGYRARDL---ASHQEVEQLFEQLDSIPSTVVHSAGSGYFGLL 88 (230)
T ss_dssp EEEEES-CHHHHHHHHHTCSSCCCEEECCT---TCHHHHHHHHHSCSSCCSEEEECCCCCCCSCG
T ss_pred EEEEeC-CHHHHHHHHHHHhhccCeEeecC---CCHHHHHHHHHHHhhcCCEEEEeCCcCCCCcc
Confidence 444443 44455555555565666666552 26788888887654333466666665555544
No 252
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=26.19 E-value=1.6e+02 Score=26.78 Aligned_cols=86 Identities=13% Similarity=0.064 Sum_probs=43.6
Q ss_pred EEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccCHHHHHHHHHc---CCCCcEE
Q 011842 161 GYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCADFKAKLLQ---NKDKPAI 237 (476)
Q Consensus 161 g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~~~Le~~l~~---~~~~p~~ 237 (476)
.++.+||+.++=.++....-. .|..|++.........+....++.++..+.+|-. |.+.+++.+++ .-.++-+
T Consensus 29 ~vlVTGas~GIG~aia~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~---d~~~v~~~~~~~~~~~g~iD~ 104 (277)
T 4dqx_A 29 VCIVTGGGSGIGRATAELFAK-NGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVS---SAKDAESMVEKTTAKWGRVDV 104 (277)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-TTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTT---CHHHHHHHHHHHHHHHSCCCE
T ss_pred EEEEECCCcHHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCC---CHHHHHHHHHHHHHHcCCCCE
Confidence 344446665554333222111 3444444444444555555556777777776632 55565555542 1122346
Q ss_pred EEEeeCCCccccc
Q 011842 238 INVNIGTTVKGAV 250 (476)
Q Consensus 238 vv~t~gtt~tG~i 250 (476)
++-++|....+.+
T Consensus 105 lv~nAg~~~~~~~ 117 (277)
T 4dqx_A 105 LVNNAGFGTTGNV 117 (277)
T ss_dssp EEECCCCCCCBCT
T ss_pred EEECCCcCCCCCc
Confidence 7777776555544
No 253
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=26.12 E-value=34 Score=34.16 Aligned_cols=33 Identities=18% Similarity=0.207 Sum_probs=29.2
Q ss_pred CCCccccccCHHHHHHHHHHhCCCCCceEEEEecCccc
Q 011842 243 GTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGALFG 280 (476)
Q Consensus 243 gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a~~g 280 (476)
..+..|+.++++++++-|+++|+ .|++|.++..
T Consensus 69 i~~~~Gt~~df~~lv~~aH~~Gi-----~VilD~V~NH 101 (496)
T 4gqr_A 69 LCTRSGNEDEFRNMVTRCNNVGV-----RIYVDAVINH 101 (496)
T ss_dssp SCBTTBCHHHHHHHHHHHHHTTC-----EEEEEECCSE
T ss_pred eCCCCCCHHHHHHHHHHHHHCCC-----EEEEEEccCc
Confidence 45677999999999999999999 9999999643
No 254
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase, synthetic gene, ISO; 1.60A {Candida albicans} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A*
Probab=26.11 E-value=78 Score=28.10 Aligned_cols=34 Identities=24% Similarity=0.191 Sum_probs=28.7
Q ss_pred CCCcEEEEEeeCCCccccccCHHHHHHHHHHhCC
Q 011842 232 KDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGF 265 (476)
Q Consensus 232 ~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~ 265 (476)
+-.|..|++..-.+..|....++++.+++++||+
T Consensus 157 Gl~Pa~vicEi~~~~dG~mar~~~l~~fA~~h~l 190 (204)
T 1tks_A 157 GLQPAGVICELVRDEDGLMMRLDDCIQFGKKHGI 190 (204)
T ss_dssp TSCSBEEEEEBBCTTTCCBCBHHHHHHHHHHHTC
T ss_pred CCCceEEEEEEeECCCCCcCCHHHHHHHHHHcCC
Confidence 4567788776655788999999999999999998
No 255
>1tzj_A ACC deaminase, 1-aminocyclopropane-1-carboxylate deaminase; substrate, PLP, crystal, complex, hydrolase; HET: PLP; 1.99A {Pseudomonas SP} SCOP: c.79.1.1 PDB: 1rqx_A* 1tz2_A* 1tyz_A* 1tzk_A* 1tzm_A*
Probab=25.96 E-value=1.5e+02 Score=28.04 Aligned_cols=53 Identities=11% Similarity=0.053 Sum_probs=30.7
Q ss_pred EEEcCCchhHHH---HHHHHHHhhCCCcEEEecCCCch--------HHHHHHHHcCCeEEEEeCC
Q 011842 161 GYITNCGTEGNL---HGILVGREVFPDGILYASRESHY--------SVFKAARMYRMECVKVDCL 214 (476)
Q Consensus 161 g~~t~ggt~An~---~al~aa~~~~p~~~Vl~s~~~H~--------S~~~~~~~~G~~v~~v~~~ 214 (476)
.++|.|+|.+|. +|..+.+. .=+.+|++++..-. .-...++.+|++++.++.+
T Consensus 69 ~vv~~GassGN~g~alA~~a~~~-G~~~~iv~p~~~~~~~~~~~~~~k~~~~~~~GA~V~~~~~~ 132 (338)
T 1tzj_A 69 TLVSIGGIQSNQTRQVAAVAAHL-GMKCVLVQENWVNYSDAVYDRVGNIQMSRILGADVRLVPDG 132 (338)
T ss_dssp EEEEEEETTCHHHHHHHHHHHHH-TCEEEEEEECCSSCCCTTTTTSHHHHHHHHTTCEEEECCC-
T ss_pred EEEEcCCchhHHHHHHHHHHHHh-CCceEEEecCCCCccccccccCccHHHHHhCCCEEEEeCCc
Confidence 677755555554 34333222 23346677655422 2567788899999887754
No 256
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=25.59 E-value=1.6e+02 Score=26.07 Aligned_cols=73 Identities=10% Similarity=0.041 Sum_probs=47.5
Q ss_pred HHHHHHcCCeEEEEeCCCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEEEecC
Q 011842 198 FKAARMYRMECVKVDCLISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIHCDGA 277 (476)
Q Consensus 198 ~~~~~~~G~~v~~v~~~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lhvD~a 277 (476)
....+..|.+++.+..+ +.++++-+++.+.. |-+|.++.....+.....++++.+.+++.+. ++++.+++=|+
T Consensus 113 ~~~l~~~G~~Vi~LG~~----vp~e~iv~~~~~~~--~d~v~l~~S~l~~~~~~~~~~~i~~l~~~~~-~~~v~v~vGG~ 185 (215)
T 3ezx_A 113 TTMLGANGFQIVDLGVD----VLNENVVEEAAKHK--GEKVLLVGSALMTTSMLGQKDLMDRLNEEKL-RDSVKCMFGGA 185 (215)
T ss_dssp HHHHHHTSCEEEECCSS----CCHHHHHHHHHHTT--TSCEEEEEECSSHHHHTHHHHHHHHHHHTTC-GGGSEEEEESS
T ss_pred HHHHHHCCCeEEEcCCC----CCHHHHHHHHHHcC--CCEEEEEchhcccCcHHHHHHHHHHHHHcCC-CCCCEEEEECC
Confidence 34556679998877653 57888877776553 2356562223344566778999999999875 33446766554
No 257
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=24.77 E-value=2.2e+02 Score=25.79 Aligned_cols=86 Identities=10% Similarity=-0.013 Sum_probs=40.9
Q ss_pred EEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHH---cCCeEEEEeCCCCCccCHHHHHHHHHc---CCCC
Q 011842 161 GYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARM---YRMECVKVDCLISGEIDCADFKAKLLQ---NKDK 234 (476)
Q Consensus 161 g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~---~G~~v~~v~~~~~g~~D~~~Le~~l~~---~~~~ 234 (476)
.++.+||+.++=.++...... .|..|++.........+.+.. .|.++..+.+|-. |.+.+++.+++ .-.+
T Consensus 6 ~~lVTGas~GIG~aia~~la~-~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~---d~~~v~~~~~~~~~~~g~ 81 (264)
T 3tfo_A 6 VILITGASGGIGEGIARELGV-AGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVT---DRHSVAAFAQAAVDTWGR 81 (264)
T ss_dssp EEEESSTTSHHHHHHHHHHHH-TTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTT---CHHHHHHHHHHHHHHHSC
T ss_pred EEEEeCCccHHHHHHHHHHHH-CCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCC---CHHHHHHHHHHHHHHcCC
Confidence 344456665554433322211 344444433333334333332 3667777776632 55555555432 2122
Q ss_pred cEEEEEeeCCCccccc
Q 011842 235 PAIINVNIGTTVKGAV 250 (476)
Q Consensus 235 p~~vv~t~gtt~tG~i 250 (476)
+-+++-+.|....+.+
T Consensus 82 iD~lVnnAG~~~~~~~ 97 (264)
T 3tfo_A 82 IDVLVNNAGVMPLSPL 97 (264)
T ss_dssp CCEEEECCCCCCCCCG
T ss_pred CCEEEECCCCCCCCCc
Confidence 3467677776555544
No 258
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=24.67 E-value=2.2e+02 Score=25.78 Aligned_cols=81 Identities=12% Similarity=0.003 Sum_probs=41.2
Q ss_pred EEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccCHHHHHHHHHc---CCCCcEE
Q 011842 161 GYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCADFKAKLLQ---NKDKPAI 237 (476)
Q Consensus 161 g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~~~Le~~l~~---~~~~p~~ 237 (476)
.++.+||+.++=.++...... .|..|++....-....+....++.++..+.+|-. |.+.+++.+++ .-.++-+
T Consensus 30 ~~lVTGas~GIG~aia~~la~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~---d~~~v~~~~~~~~~~~g~iD~ 105 (272)
T 4dyv_A 30 IAIVTGAGSGVGRAVAVALAG-AGYGVALAGRRLDALQETAAEIGDDALCVPTDVT---DPDSVRALFTATVEKFGRVDV 105 (272)
T ss_dssp EEEETTTTSHHHHHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTT---SHHHHHHHHHHHHHHHSCCCE
T ss_pred EEEEeCCCcHHHHHHHHHHHH-CCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCC---CHHHHHHHHHHHHHHcCCCCE
Confidence 445556666554443322211 3444444433444555566666666777776532 55666655542 2122346
Q ss_pred EEEeeCCC
Q 011842 238 INVNIGTT 245 (476)
Q Consensus 238 vv~t~gtt 245 (476)
++-++|..
T Consensus 106 lVnnAg~~ 113 (272)
T 4dyv_A 106 LFNNAGTG 113 (272)
T ss_dssp EEECCCCC
T ss_pred EEECCCCC
Confidence 66667653
No 259
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=24.61 E-value=2e+02 Score=26.22 Aligned_cols=86 Identities=10% Similarity=-0.081 Sum_probs=42.4
Q ss_pred EEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccCHHHHHHHHHc---CCCCcEE
Q 011842 161 GYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCADFKAKLLQ---NKDKPAI 237 (476)
Q Consensus 161 g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~~~Le~~l~~---~~~~p~~ 237 (476)
.++.+||+.++=.++...... .|..|++...........+..++.++..+.+|-. |.+.+++.+++ .-.++-+
T Consensus 31 ~vlVTGas~gIG~aia~~la~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~---d~~~v~~~~~~~~~~~g~iD~ 106 (277)
T 3gvc_A 31 VAIVTGAGAGIGLAVARRLAD-EGCHVLCADIDGDAADAAATKIGCGAAACRVDVS---DEQQIIAMVDACVAAFGGVDK 106 (277)
T ss_dssp EEEETTTTSTHHHHHHHHHHH-TTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTT---CHHHHHHHHHHHHHHHSSCCE
T ss_pred EEEEECCCcHHHHHHHHHHHH-CCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCC---CHHHHHHHHHHHHHHcCCCCE
Confidence 344446655544333222111 3445544444444555555555766777766532 55555555442 2123346
Q ss_pred EEEeeCCCccccc
Q 011842 238 INVNIGTTVKGAV 250 (476)
Q Consensus 238 vv~t~gtt~tG~i 250 (476)
++-+++....+.+
T Consensus 107 lvnnAg~~~~~~~ 119 (277)
T 3gvc_A 107 LVANAGVVHLASL 119 (277)
T ss_dssp EEECCCCCCCBCT
T ss_pred EEECCCCCCCCCh
Confidence 6666775554443
No 260
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=23.97 E-value=3.4e+02 Score=23.74 Aligned_cols=83 Identities=13% Similarity=0.062 Sum_probs=39.3
Q ss_pred EEcCCchhHHHHHH--HHHHhhCCCcEEEecCCCchHHHHH---HHHcCCeEEEEeCCCCCccCHHHHHHHHH---cCCC
Q 011842 162 YITNCGTEGNLHGI--LVGREVFPDGILYASRESHYSVFKA---ARMYRMECVKVDCLISGEIDCADFKAKLL---QNKD 233 (476)
Q Consensus 162 ~~t~ggt~An~~al--~aa~~~~p~~~Vl~s~~~H~S~~~~---~~~~G~~v~~v~~~~~g~~D~~~Le~~l~---~~~~ 233 (476)
++.+||+.++=.++ ..+. .|..|++.........+. .+..+.++..+.+|-. |.+.+++.++ +...
T Consensus 8 vlITGas~gIG~~~a~~l~~---~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~---~~~~~~~~~~~~~~~~~ 81 (247)
T 3lyl_A 8 ALVTGASRGIGFEVAHALAS---KGATVVGTATSQASAEKFENSMKEKGFKARGLVLNIS---DIESIQNFFAEIKAENL 81 (247)
T ss_dssp EEESSCSSHHHHHHHHHHHH---TTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTT---CHHHHHHHHHHHHHTTC
T ss_pred EEEECCCChHHHHHHHHHHH---CCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCC---CHHHHHHHHHHHHHHcC
Confidence 44446655543333 3332 344444333333333332 2333667777776632 5555555443 2323
Q ss_pred CcEEEEEeeCCCccccc
Q 011842 234 KPAIINVNIGTTVKGAV 250 (476)
Q Consensus 234 ~p~~vv~t~gtt~tG~i 250 (476)
++-+++-+.+....+.+
T Consensus 82 ~id~li~~Ag~~~~~~~ 98 (247)
T 3lyl_A 82 AIDILVNNAGITRDNLM 98 (247)
T ss_dssp CCSEEEECCCCCCCCCG
T ss_pred CCCEEEECCCCCCCCch
Confidence 34467666765544443
No 261
>3a11_A Translation initiation factor EIF-2B, delta subun; isomerase, hexamer, rossmann fold; 2.50A {Thermococcus kodakaraensis} PDB: 3a9c_A* 3vm6_A*
Probab=23.74 E-value=3.8e+02 Score=25.53 Aligned_cols=99 Identities=15% Similarity=0.090 Sum_probs=57.8
Q ss_pred cEEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCc--hHHHHHH---HHcCCeEEEEeCCCCCccCHHHHHHHHHcCCCC
Q 011842 160 WGYITNCGTEGNLHGILVGREVFPDGILYASRESH--YSVFKAA---RMYRMECVKVDCLISGEIDCADFKAKLLQNKDK 234 (476)
Q Consensus 160 ~g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H--~S~~~~~---~~~G~~v~~v~~~~~g~~D~~~Le~~l~~~~~~ 234 (476)
..++|.|.|...+..+..+.+......|++.+.-- .. ...+ ...|+.+..|+-+.-+.+ +.+-.
T Consensus 143 ~~ILTh~~S~tvl~~l~~A~~~gk~~~V~v~EtRP~~qG-rltA~eL~~~GI~vtlI~Dsa~~~~--------M~~Vd-- 211 (338)
T 3a11_A 143 DVIMTHCHSKAAISVMKTAWEQGKDIKVIVTETRPKWQG-KITAKELASYGIPVIYVVDSAARHY--------MKMTD-- 211 (338)
T ss_dssp CEEEECSCCHHHHHHHHHHHHTTCCCEEEEECCTTTTHH-HHHHHHHHHTTCCEEEECGGGTTTT--------GGGCS--
T ss_pred CEEEEeCCcHHHHHHHHHHHHCCCeEEEEEeCCCCchhh-HHHHHHHHhCCCCEEEEehHHHHHH--------HHhCC--
Confidence 47888888877777777776654556788776432 22 2222 334888888864321221 11112
Q ss_pred cEEEEEeeCCCccccccC---HHHHHHHHHHhCCCCCceEEEEe
Q 011842 235 PAIINVNIGTTVKGAVDD---LDLVIQTLEESGFTQDRFYIHCD 275 (476)
Q Consensus 235 p~~vv~t~gtt~tG~id~---l~~I~~ia~~~g~~~~~~~lhvD 275 (476)
.+++....-...|.+.+ -..++-+|+.||+ .++|=
T Consensus 212 -~VivGAd~V~anG~v~NKiGT~~lAl~Ak~~~v-----PfyV~ 249 (338)
T 3a11_A 212 -KVVMGADSITVNGAVINKIGTALIALTAKEHRV-----WTMIA 249 (338)
T ss_dssp -EEEECCSEECTTSCEEEETTHHHHHHHHHHTTC-----EEEEE
T ss_pred -EEEECccEEecCCCEeecccHHHHHHHHHHcCC-----CEEEe
Confidence 24444444445555532 4678889999999 77664
No 262
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=23.55 E-value=4.1e+02 Score=23.93 Aligned_cols=94 Identities=18% Similarity=0.057 Sum_probs=54.2
Q ss_pred EEEcCCchhHHHHHHHHHHhhCCCcEE-E---ecC---------CCchHHHHHHHHcCCeEEEEeCCCCCccCHHHHHHH
Q 011842 161 GYITNCGTEGNLHGILVGREVFPDGIL-Y---ASR---------ESHYSVFKAARMYRMECVKVDCLISGEIDCADFKAK 227 (476)
Q Consensus 161 g~~t~ggt~An~~al~aa~~~~p~~~V-l---~s~---------~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~~~Le~~ 227 (476)
++..|||..+.+.+.++..+ .-+++ + .+. ..+......|+.+|+....+++.....--.++|.++
T Consensus 8 vvl~SGGkDSs~al~~l~~~--G~eV~~L~~~~~~~~~s~~~h~~~~e~a~~~A~~LGIpl~~v~~~g~~~~e~e~l~~~ 85 (237)
T 3rjz_A 8 AVLYSGGKDSNYALYWAIKN--RFSVKFLVTMVSENEESYMYHTINANLTDLQARALGIPLVKGFTQGEKEKEVEDLKRV 85 (237)
T ss_dssp EEECCSSHHHHHHHHHHHHT--TCEEEEEEEEECC--------CCSSSHHHHHHHHHTCCEEEEEC------CHHHHHHH
T ss_pred EEEecCcHHHHHHHHHHHHc--CCeEEEEEEEcCCCCCccccCCccHHHHHHHHHHcCCCEEEEECCCCchHHHHHHHHH
Confidence 67789999998877665543 22221 1 111 123346678888999988888753322346788888
Q ss_pred HHcCCCCcEEEEEeeCCCcccccc---CHHHHHHHHHHhCC
Q 011842 228 LLQNKDKPAIINVNIGTTVKGAVD---DLDLVIQTLEESGF 265 (476)
Q Consensus 228 l~~~~~~p~~vv~t~gtt~tG~id---~l~~I~~ia~~~g~ 265 (476)
+.+-. . -.++ +|+++ --..+-.+|.+.|+
T Consensus 86 l~~~~-i-~~vv-------~Gdi~s~yqr~r~e~vc~~~gl 117 (237)
T 3rjz_A 86 LSGLK-I-QGIV-------AGALASKYQRKRIEKVAKELGL 117 (237)
T ss_dssp HTTSC-C-SEEE-------CC---CCSHHHHHHHHHHHTTC
T ss_pred HHhcC-C-cEEE-------ECCcchHHHHHHHHHHHHHcCC
Confidence 86531 0 1222 36663 24677889999998
No 263
>3mos_A Transketolase, TK; thiamin diphosphate TPP THDP enzyme catalysis sugar metaboli transferase; HET: TPP; 1.75A {Homo sapiens} PDB: 3ooy_A*
Probab=23.35 E-value=6.4e+02 Score=26.13 Aligned_cols=67 Identities=10% Similarity=0.063 Sum_probs=43.4
Q ss_pred HHHHHHHHHHhh-CCCcEEEecCCCc------------hHHHHHHHHcCCeEEEEeCCCCCccCHHHHHHHHHcCCCCcE
Q 011842 170 GNLHGILVGREV-FPDGILYASRESH------------YSVFKAARMYRMECVKVDCLISGEIDCADFKAKLLQNKDKPA 236 (476)
Q Consensus 170 An~~al~aa~~~-~p~~~Vl~s~~~H------------~S~~~~~~~~G~~v~~v~~~~~g~~D~~~Le~~l~~~~~~p~ 236 (476)
.++.++..+... .+..++++.+..+ ..+.+.++.+|++...|.-. |+++|.+++.+..++|.
T Consensus 160 ~~~Eal~~A~~~~l~~livi~nnN~~~i~~~~~~~~~~~~~~~~~~a~G~~~~~VdG~-----d~~~l~~al~~~~~~P~ 234 (616)
T 3mos_A 160 SVWEAMAFASIYKLDNLVAILDINRLGQSDPAPLQHQMDIYQKRCEAFGWHAIIVDGH-----SVEELCKAFGQAKHQPT 234 (616)
T ss_dssp HHHHHHHHHHHTTCTTEEEEEEECSBCSSSBCTTTTCHHHHHHHHHHTTCEEEEEETT-----CHHHHHHHHHSCCSSCE
T ss_pred cHHHHHHHHHHcCCCcEEEEEECCCCCCcCCcccccChHHHHHHHHHcCCeEEEEcCC-----CHHHHHHHHHhcCCCCE
Confidence 345666665543 3455566554332 22456677789987766422 89999999987777898
Q ss_pred EEEEe
Q 011842 237 IINVN 241 (476)
Q Consensus 237 ~vv~t 241 (476)
+|.+.
T Consensus 235 lI~v~ 239 (616)
T 3mos_A 235 AIIAK 239 (616)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 77665
No 264
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=23.19 E-value=2.7e+02 Score=24.72 Aligned_cols=83 Identities=10% Similarity=-0.075 Sum_probs=39.3
Q ss_pred EEcCCchhHHHHHHHHHHhhCCCc-EEEecCCCchHHHH---HHHHcCCeEEEEeCCCCCccCHHHHHHHHH---cCCCC
Q 011842 162 YITNCGTEGNLHGILVGREVFPDG-ILYASRESHYSVFK---AARMYRMECVKVDCLISGEIDCADFKAKLL---QNKDK 234 (476)
Q Consensus 162 ~~t~ggt~An~~al~aa~~~~p~~-~Vl~s~~~H~S~~~---~~~~~G~~v~~v~~~~~g~~D~~~Le~~l~---~~~~~ 234 (476)
++.+||+.++=.++.-.... .|. +++++.. -....+ ..+..|.++..+.+|-. |.+.+++.++ +. .+
T Consensus 10 vlVTGas~GIG~aia~~l~~-~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~Dv~---~~~~v~~~~~~~~~~-g~ 83 (252)
T 3h7a_A 10 VAVIGAGDYIGAEIAKKFAA-EGFTVFAGRRN-GEKLAPLVAEIEAAGGRIVARSLDAR---NEDEVTAFLNAADAH-AP 83 (252)
T ss_dssp EEEECCSSHHHHHHHHHHHH-TTCEEEEEESS-GGGGHHHHHHHHHTTCEEEEEECCTT---CHHHHHHHHHHHHHH-SC
T ss_pred EEEECCCchHHHHHHHHHHH-CCCEEEEEeCC-HHHHHHHHHHHHhcCCeEEEEECcCC---CHHHHHHHHHHHHhh-CC
Confidence 44446655544333222111 343 4444443 223222 22334677777877633 4455544443 33 34
Q ss_pred cEEEEEeeCCCccccc
Q 011842 235 PAIINVNIGTTVKGAV 250 (476)
Q Consensus 235 p~~vv~t~gtt~tG~i 250 (476)
+-+++-++|....+.+
T Consensus 84 id~lv~nAg~~~~~~~ 99 (252)
T 3h7a_A 84 LEVTIFNVGANVNFPI 99 (252)
T ss_dssp EEEEEECCCCCCCCCG
T ss_pred ceEEEECCCcCCCCCc
Confidence 4567666775554443
No 265
>1f2d_A 1-aminocyclopropane-1-carboxylate deaminase; carbon-carbon L open twisted alpha/beta, lyase; HET: PLP; 2.00A {Williopsis saturnus} SCOP: c.79.1.1 PDB: 1j0e_A* 1j0d_A* 1j0c_A*
Probab=22.75 E-value=1.5e+02 Score=28.14 Aligned_cols=53 Identities=9% Similarity=0.036 Sum_probs=32.4
Q ss_pred EEEcCCchhHHH---HHHHHHHhhCCCcEEEecCCCc-----------hHHHHHHHHcCCeEEEEeCC
Q 011842 161 GYITNCGTEGNL---HGILVGREVFPDGILYASRESH-----------YSVFKAARMYRMECVKVDCL 214 (476)
Q Consensus 161 g~~t~ggt~An~---~al~aa~~~~p~~~Vl~s~~~H-----------~S~~~~~~~~G~~v~~v~~~ 214 (476)
.+++.|+|.+|. +|..+++. .=+.+|++++..- ..-...++.+|++++.++.+
T Consensus 69 ~vv~~G~ssGN~g~alA~~a~~~-G~~~~iv~p~~~~~~~~~~~~~~~~~k~~~~~~~GA~v~~~~~~ 135 (341)
T 1f2d_A 69 HLVSIGGRQSNQTRMVAALAAKL-GKKCVLIQEDWVPIPEAEKDVYNRVGNIELSRIMGADVRVIEDG 135 (341)
T ss_dssp EEEEEEETTCHHHHHHHHHHHHH-TCEEEEEEECCSCCCGGGTTTTTTSHHHHHHHHTTCEEEECCCC
T ss_pred EEEEcCCcchHHHHHHHHHHHHh-CCceEEEeccCCCccccccccccccccHHHHHhCCCEEEEeCCc
Confidence 677766666665 33333222 2334666665442 22667888999999988754
No 266
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=22.56 E-value=2.1e+02 Score=26.57 Aligned_cols=70 Identities=16% Similarity=0.103 Sum_probs=40.8
Q ss_pred CCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccCHHHHHHHHH---cCCCCcEEEEEeeCCCccccccCHHHHHHH
Q 011842 183 PDGILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCADFKAKLL---QNKDKPAIINVNIGTTVKGAVDDLDLVIQT 259 (476)
Q Consensus 183 p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~~~Le~~l~---~~~~~p~~vv~t~gtt~tG~id~l~~I~~i 259 (476)
++..+++ .|.++...++.+|++...+... +....+.+|.+.++ +.. . .+|++. +.... +-+-.|
T Consensus 189 ~~~~~v~---~H~af~Yf~~~yGl~~~~~~~~-~~eps~~~l~~l~~~ik~~~-v-~~If~e-~~~~~------~~~~~i 255 (291)
T 1pq4_A 189 PQRKFIV---FHPSWAYFARDYNLVQIPIEVE-GQEPSAQELKQLIDTAKENN-L-TMVFGE-TQFST------KSSEAI 255 (291)
T ss_dssp SCCEEEE---SSCCCHHHHHHTTCEEEESCBT-TBCCCHHHHHHHHHHHHTTT-C-CEEEEE-TTSCC------HHHHHH
T ss_pred CCCEEEE---ECCchHHHHHHCCCEEeecccC-CCCCCHHHHHHHHHHHHHcC-C-CEEEEe-CCCCh------HHHHHH
Confidence 5556666 5667777889999987765432 34566666666654 332 2 244443 32221 233346
Q ss_pred HHHhCC
Q 011842 260 LEESGF 265 (476)
Q Consensus 260 a~~~g~ 265 (476)
+++.|+
T Consensus 256 a~~~g~ 261 (291)
T 1pq4_A 256 AAEIGA 261 (291)
T ss_dssp HHHHTC
T ss_pred HHHcCC
Confidence 888888
No 267
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=22.49 E-value=1.9e+02 Score=25.53 Aligned_cols=85 Identities=11% Similarity=0.054 Sum_probs=37.2
Q ss_pred EEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccCHHHHHHHHHc---CCCCcEEE
Q 011842 162 YITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCADFKAKLLQ---NKDKPAII 238 (476)
Q Consensus 162 ~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~~~Le~~l~~---~~~~p~~v 238 (476)
++.+||+.++=.++...... .|..|++....-....+....++.++..+.+|-. |.+.+++.+++ ....+-++
T Consensus 6 vlVTGas~GIG~a~a~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~---~~~~v~~~~~~~~~~~g~id~l 81 (235)
T 3l6e_A 6 IIVTGAGSGLGRALTIGLVE-RGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLA---HHEDVDVAFAAAVEWGGLPELV 81 (235)
T ss_dssp EEEESTTSHHHHHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTT---SHHHHHHHHHHHHHHHCSCSEE
T ss_pred EEEECCCCHHHHHHHHHHHH-CCCEEEEEECCHHHHHHHHHHhcCCceEEECCCC---CHHHHHHHHHHHHHhcCCCcEE
Confidence 34446655544333222111 3444443333333444444444445666666532 55555555432 21223366
Q ss_pred EEeeCCCccccc
Q 011842 239 NVNIGTTVKGAV 250 (476)
Q Consensus 239 v~t~gtt~tG~i 250 (476)
+-++|....+.+
T Consensus 82 vnnAg~~~~~~~ 93 (235)
T 3l6e_A 82 LHCAGTGEFGPV 93 (235)
T ss_dssp EEECCCC-----
T ss_pred EECCCCCCCCCh
Confidence 666776544443
No 268
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=22.30 E-value=4.7e+02 Score=24.36 Aligned_cols=101 Identities=14% Similarity=0.110 Sum_probs=52.6
Q ss_pred HHHHHcCCeEEEEe-CCCCCccCHHHHHHHHHcCCCCc------------------------EEEEEeeCCCccccccCH
Q 011842 199 KAARMYRMECVKVD-CLISGEIDCADFKAKLLQNKDKP------------------------AIINVNIGTTVKGAVDDL 253 (476)
Q Consensus 199 ~~~~~~G~~v~~v~-~~~~g~~D~~~Le~~l~~~~~~p------------------------~~vv~t~gtt~tG~id~l 253 (476)
..++-+|+.-+.+- ++++|.+|.+.+++.+......+ +=-+.|+|...+ +.+-+
T Consensus 118 ~~~~~~GAdGvVfG~L~~dg~iD~~~~~~Li~~a~~l~vTFHRAFD~~~d~~~Ale~Li~lGvdrILTSG~~~~-a~~Gl 196 (287)
T 3iwp_A 118 RLAKLYGADGLVFGALTEDGHIDKELCMSLMAICRPLPVTFHRAFDMVHDPMAALETLLTLGFERVLTSGCDSS-ALEGL 196 (287)
T ss_dssp HHHHHTTCSEEEECCBCTTSCBCHHHHHHHHHHHTTSCEEECGGGGGCSCHHHHHHHHHHHTCSEEEECTTSSS-TTTTH
T ss_pred HHHHHcCCCEEEEeeeCCCCCcCHHHHHHHHHHcCCCcEEEECchhccCCHHHHHHHHHHcCCCEEECCCCCCC-hHHhH
Confidence 34455566544444 24566677766666665421100 113455665433 57778
Q ss_pred HHHHHHHHHhCCCCCceEEEEecCcccccccccccCCCCCCc--ccccEEEEcCCCCCCC
Q 011842 254 DLVIQTLEESGFTQDRFYIHCDGALFGLMMPFVKKAPKVSFK--KPIGSVSVSGHKFVGC 311 (476)
Q Consensus 254 ~~I~~ia~~~g~~~~~~~lhvD~a~~g~~~~~~~~~~~~~~~--~~~Dsi~~s~hK~l~~ 311 (476)
+.|.++.++.+- ++.|+++| ++-+.... .+. .+++-+-+|..+|...
T Consensus 197 ~~Lk~Lv~~a~~---rI~ImaGG----GV~~~Ni~----~l~~~tG~~~~H~S~~~~~~s 245 (287)
T 3iwp_A 197 PLIKRLIEQAKG---RIVVMPGG----GITDRNLQ----RILEGSGATEFHCSARSTRDS 245 (287)
T ss_dssp HHHHHHHHHHTT---SSEEEECT----TCCTTTHH----HHHHHHCCSEEEECCEEEECC
T ss_pred HHHHHHHHHhCC---CCEEEECC----CcCHHHHH----HHHHhhCCCEEeECcCcccCC
Confidence 888888887652 22677663 22211100 111 2367777777666543
No 269
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=22.30 E-value=3.4e+02 Score=26.06 Aligned_cols=48 Identities=6% Similarity=-0.031 Sum_probs=32.1
Q ss_pred cCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHHHhCCCCCceEEE
Q 011842 219 IDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLEESGFTQDRFYIH 273 (476)
Q Consensus 219 ~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~~~g~~~~~~~lh 273 (476)
.+++++++.|+...- -+|.+ -.+-.|.+....+|+++|+++|+ .+++|
T Consensus 247 ~~~~~~~~~i~~~~~--d~v~i--k~~~~GGit~~~~i~~~A~~~g~---~~~~~ 294 (379)
T 2rdx_A 247 TGLHMAQRIVADRGA--EICCL--KISNLGGLSKARRTRDFLIDNRM---PVVAE 294 (379)
T ss_dssp CSHHHHHHHHHHTCC--SEEEE--ETTTTTSHHHHHHHHHHHHHTTC---CEEEE
T ss_pred CCHHHHHHHHHcCCC--CEEEE--eccccCCHHHHHHHHHHHHHcCC---eEEEe
Confidence 366777777765421 14433 45566888888999999999998 34555
No 270
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=22.19 E-value=3.5e+02 Score=25.30 Aligned_cols=74 Identities=12% Similarity=-0.001 Sum_probs=45.2
Q ss_pred CCcEEEecCCCchHHHHHHHHcCCeEEEEeC-CCCCccCHHHHHHHHHcCCCCcEEEEEeeCCCccccccCHHHHHHHHH
Q 011842 183 PDGILYASRESHYSVFKAARMYRMECVKVDC-LISGEIDCADFKAKLLQNKDKPAIINVNIGTTVKGAVDDLDLVIQTLE 261 (476)
Q Consensus 183 p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~-~~~g~~D~~~Le~~l~~~~~~p~~vv~t~gtt~tG~id~l~~I~~ia~ 261 (476)
++..+++ .|.++...++.+|++...+.. .++....+.+|.+.++.-...-+-+++..+... -+-+-.|++
T Consensus 189 ~~~~~v~---~H~af~Yfa~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e~~~~------~~~~~~ia~ 259 (312)
T 2o1e_A 189 EKKEFIT---QHTAFGYLAKEYGLKQVPIAGLSPDQEPSAASLAKLKTYAKEHNVKVIYFEEIAS------SKVADTLAS 259 (312)
T ss_dssp SCCEEEE---SSCTTHHHHHHTTCEEEECSSCCSSSCCCHHHHHHHHHHTTSSCCCEEECSSCCC------HHHHHHHHH
T ss_pred CCCEEEE---ECCchHHHHHHCCCeEEEeeccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCC------hHHHHHHHH
Confidence 5556666 577788889999998776542 334567888888877643222122333333222 144556688
Q ss_pred HhCC
Q 011842 262 ESGF 265 (476)
Q Consensus 262 ~~g~ 265 (476)
+.|+
T Consensus 260 e~g~ 263 (312)
T 2o1e_A 260 EIGA 263 (312)
T ss_dssp HTCC
T ss_pred HhCC
Confidence 8998
No 271
>3vc3_A Beta-cyanoalnine synthase; beta-cyanoalanine synthase, transferase; HET: C6P; 1.77A {Glycine max} PDB: 3vbe_A*
Probab=22.07 E-value=1.5e+02 Score=28.38 Aligned_cols=52 Identities=12% Similarity=0.003 Sum_probs=38.0
Q ss_pred EEEcCCchhHHHHHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeC
Q 011842 161 GYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDC 213 (476)
Q Consensus 161 g~~t~ggt~An~~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~ 213 (476)
++-+++|..+.-.|..+++. .=+..|++++..-..-...++.+|++++.++.
T Consensus 90 Vv~aSsGN~g~alA~~aa~~-G~~~~IvmP~~~~~~k~~~~~~~GA~Vv~v~~ 141 (344)
T 3vc3_A 90 LIEPTSGNMGISMAFMAAMK-GYKMVLTMPSYTSLERRVTMRAFGAELILTDP 141 (344)
T ss_dssp EEEECSSHHHHHHHHHHHHH-TCEEEEEEETTSCHHHHHHHHHTTCEEEEECG
T ss_pred EEEeCCcHHHHHHHHHHHHc-CCcEEEEECCCChHHHHHHHHHcCCEEEEECC
Confidence 55567778887777766554 23457888887777777888999999988864
No 272
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=22.02 E-value=4.1e+02 Score=23.41 Aligned_cols=78 Identities=18% Similarity=0.060 Sum_probs=39.5
Q ss_pred EEEcCCchhHHH--HHHHHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccCHHHHHHHHHc---CCCCc
Q 011842 161 GYITNCGTEGNL--HGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCADFKAKLLQ---NKDKP 235 (476)
Q Consensus 161 g~~t~ggt~An~--~al~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~~~Le~~l~~---~~~~p 235 (476)
.++| |++.++= ++...+. .|..|++.........+....++.++..+.+|-. |.+.+++.+++ .-..+
T Consensus 12 vlIT-Gas~gIG~~~a~~l~~---~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~---~~~~~~~~~~~~~~~~g~i 84 (261)
T 3n74_A 12 ALIT-GAGSGFGEGMAKRFAK---GGAKVVIVDRDKAGAERVAGEIGDAALAVAADIS---KEADVDAAVEAALSKFGKV 84 (261)
T ss_dssp EEEE-TTTSHHHHHHHHHHHH---TTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTT---SHHHHHHHHHHHHHHHSCC
T ss_pred EEEE-CCCchHHHHHHHHHHH---CCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCC---CHHHHHHHHHHHHHhcCCC
Confidence 4444 5555443 3333333 3444444433444555566666777777777632 45555555442 21223
Q ss_pred EEEEEeeCCC
Q 011842 236 AIINVNIGTT 245 (476)
Q Consensus 236 ~~vv~t~gtt 245 (476)
-+++-+.+..
T Consensus 85 d~li~~Ag~~ 94 (261)
T 3n74_A 85 DILVNNAGIG 94 (261)
T ss_dssp CEEEECCCCC
T ss_pred CEEEECCccC
Confidence 3666666643
No 273
>1uta_A FTSN, MSGA, cell division protein FTSN; bacterial cell division protein, RNP domain, transmembrane, inner membrane, repeat; NMR {Escherichia coli} SCOP: d.58.52.1
Probab=21.50 E-value=1.7e+02 Score=21.09 Aligned_cols=26 Identities=27% Similarity=0.253 Sum_probs=21.5
Q ss_pred CCEEEEEEcCCCCHHHHHHHHHHHHH
Q 011842 420 GNIAHVVVMPNVTIDKLDDFLNELIE 445 (476)
Q Consensus 420 ~~~lRv~~~~~~T~edid~~~~~l~~ 445 (476)
+...||.+.|..+.++.+.+.+.|++
T Consensus 43 ~~~yRV~vGpf~s~~~A~~~~~~L~~ 68 (81)
T 1uta_A 43 NGWNRVVIGPVKGKENADSTLNRLKM 68 (81)
T ss_dssp SSSEEEEESSCBTTTHHHHHHHHHHH
T ss_pred CcEEEEEECCcCCHHHHHHHHHHHHH
Confidence 45679999999999999888877764
No 274
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=21.50 E-value=2.6e+02 Score=24.85 Aligned_cols=83 Identities=12% Similarity=-0.001 Sum_probs=41.5
Q ss_pred EEEcCCchhHHHHHH--HHHHhhCCCcEEEecCCCchHHHHHHHHcCCeEEEEeCCCCCccCHHHHHHHHHc---CCCCc
Q 011842 161 GYITNCGTEGNLHGI--LVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDCLISGEIDCADFKAKLLQ---NKDKP 235 (476)
Q Consensus 161 g~~t~ggt~An~~al--~aa~~~~p~~~Vl~s~~~H~S~~~~~~~~G~~v~~v~~~~~g~~D~~~Le~~l~~---~~~~p 235 (476)
.++| ||+.++=.++ ..+. .|..|++.........+....++.++..+.+|-. |.+.+++.+++ .-..+
T Consensus 11 vlVT-Gas~gIG~~ia~~l~~---~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~---~~~~v~~~~~~~~~~~g~i 83 (259)
T 4e6p_A 11 ALIT-GSARGIGRAFAEAYVR---EGATVAIADIDIERARQAAAEIGPAAYAVQMDVT---RQDSIDAAIAATVEHAGGL 83 (259)
T ss_dssp EEEE-TCSSHHHHHHHHHHHH---TTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTT---CHHHHHHHHHHHHHHSSSC
T ss_pred EEEE-CCCcHHHHHHHHHHHH---CCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCC---CHHHHHHHHHHHHHHcCCC
Confidence 4444 5555543333 2232 3444444443444455555555666666766532 55555555542 22234
Q ss_pred EEEEEeeCCCccccc
Q 011842 236 AIINVNIGTTVKGAV 250 (476)
Q Consensus 236 ~~vv~t~gtt~tG~i 250 (476)
-+++-+++....+.+
T Consensus 84 d~lv~~Ag~~~~~~~ 98 (259)
T 4e6p_A 84 DILVNNAALFDLAPI 98 (259)
T ss_dssp CEEEECCCCCCCBCG
T ss_pred CEEEECCCcCCCCCc
Confidence 466666775544443
No 275
>3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus}
Probab=20.50 E-value=1.1e+02 Score=29.41 Aligned_cols=24 Identities=17% Similarity=0.199 Sum_probs=19.9
Q ss_pred cccCHHHHHHHHHHhCCCCCceEEEEecC
Q 011842 249 AVDDLDLVIQTLEESGFTQDRFYIHCDGA 277 (476)
Q Consensus 249 ~id~l~~I~~ia~~~g~~~~~~~lhvD~a 277 (476)
..+.++++++.|+++|+ ++++|--
T Consensus 85 ~l~~ld~~v~~a~~~Gi-----yVIlDlH 108 (345)
T 3jug_A 85 DIDTVREVIELAEQNKM-----VAVVEVH 108 (345)
T ss_dssp CHHHHHHHHHHHHTTTC-----EEEEEEC
T ss_pred HHHHHHHHHHHHHHCCC-----EEEEEec
Confidence 46678899999999999 9998843
No 276
>1dec_A Decorsin; blood coagulation; NMR {Macrobdella decora} SCOP: g.3.15.2
Probab=20.39 E-value=42 Score=20.21 Aligned_cols=17 Identities=41% Similarity=1.052 Sum_probs=12.6
Q ss_pred CCCCccccccCCccccccc
Q 011842 456 RQPPCIAADIGSENCVCAA 474 (476)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~ 474 (476)
+-|.|-.+| ||.|+|..
T Consensus 3 rlpqcqgdd--qekclcnk 19 (39)
T 1dec_A 3 RLPQCQGDD--QEKCLCNK 19 (39)
T ss_dssp CCCBCCSSC--SSCEESSS
T ss_pred cCccccCcc--hhhccccC
Confidence 457787776 78899863
Done!