Your job contains 1 sequence.
>011845
MKCIDYWPEDGRPYVALGKVLSKQSKVAEARAIYAKGSQATQGENPYIWQCWAVLENKLG
NIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTL
ALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPK
NRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFR
RASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQRV
GNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEIRNLYFQQRTEVVDDASW
VMGFMDIIDPALDRIKQLLNLEKSSYKEPSAYSPGDNESTDDEASVSRYSGLYVGNDLES
ASGFDLDDFIRNKLNLDPDQLDVLLEKTSNPSVVRKVNYPRRRIFRPEDKTAATLA
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 011845
(476 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2086132 - symbol:HCF107 "high chlorophyll fluo... 1787 3.2e-184 1
TAIR|locus:2128751 - symbol:EMB2770 "EMBRYO DEFECTIVE 277... 212 1.1e-13 1
UNIPROTKB|J9P5Z1 - symbol:CRNKL1 "Uncharacterized protein... 201 1.0e-12 1
UNIPROTKB|Q5JY65 - symbol:CRNKL1 "Crooked neck-like prote... 200 1.6e-12 1
UNIPROTKB|Q9BZJ0 - symbol:CRNKL1 "Crooked neck-like prote... 200 1.7e-12 1
ASPGD|ASPL0000053069 - symbol:AN1259 species:162425 "Emer... 198 1.9e-12 1
FB|FBgn0000377 - symbol:crn "crooked neck" species:7227 "... 196 3.4e-12 1
MGI|MGI:1914127 - symbol:Crnkl1 "Crn, crooked neck-like 1... 194 5.6e-12 1
RGD|620507 - symbol:Crnkl1 "crooked neck pre-mRNA splicin... 194 5.6e-12 1
UNIPROTKB|F1MZT2 - symbol:CRNKL1 "Uncharacterized protein... 193 8.7e-12 1
UNIPROTKB|F1PYE9 - symbol:CRNKL1 "Uncharacterized protein... 191 1.5e-11 1
UNIPROTKB|F1P3Q8 - symbol:CRNKL1 "Uncharacterized protein... 189 2.0e-11 1
ZFIN|ZDB-GENE-040426-694 - symbol:crnkl1 "crooked neck pr... 195 3.8e-11 2
WB|WBGene00019762 - symbol:M03F8.3 species:6239 "Caenorha... 186 4.8e-11 1
DICTYBASE|DDB_G0278819 - symbol:DDB_G0278819 "HAT repeat-... 175 7.0e-10 1
POMBASE|SPBC31F10.11c - symbol:cwf4 "complexed with Cdc5 ... 172 1.1e-09 2
SGD|S000004107 - symbol:CLF1 "Member of the NineTeen Comp... 153 2.1e-09 2
POMBASE|SPBC6B1.07 - symbol:prp1 "U4/U6 x U5 tri-snRNP co... 172 2.1e-09 1
UNIPROTKB|O94906 - symbol:PRPF6 "Pre-mRNA-processing fact... 169 4.8e-09 1
TAIR|locus:2080853 - symbol:AT3G51110 species:3702 "Arabi... 163 5.8e-09 1
MGI|MGI:1922946 - symbol:Prpf6 "PRP6 pre-mRNA splicing fa... 167 7.9e-09 1
TAIR|locus:2161363 - symbol:AT5G45990 species:3702 "Arabi... 165 8.2e-09 1
ASPGD|ASPL0000068414 - symbol:AN7447 species:162425 "Emer... 165 1.3e-08 1
TAIR|locus:2089999 - symbol:AT3G13210 species:3702 "Arabi... 163 1.3e-08 1
UNIPROTKB|F1N9U0 - symbol:PRPF6 "Uncharacterized protein"... 165 1.3e-08 1
DICTYBASE|DDB_G0272374 - symbol:prpf6 "pre-mRNA processin... 165 1.4e-08 1
TAIR|locus:2152965 - symbol:AT5G41770 species:3702 "Arabi... 163 1.5e-08 1
UNIPROTKB|Q2KJJ0 - symbol:PRPF6 "Pre-mRNA-processing fact... 164 1.7e-08 1
UNIPROTKB|E2RPW8 - symbol:PRPF6 "Uncharacterized protein"... 164 1.7e-08 1
ZFIN|ZDB-GENE-030131-2575 - symbol:prpf6 "PRP6 pre-mRNA p... 163 2.2e-08 1
RGD|1307103 - symbol:Prpf6 "PRP6 pre-mRNA processing fact... 162 2.8e-08 1
UNIPROTKB|F1NNA8 - symbol:Gga.1615 "Uncharacterized prote... 154 2.1e-07 1
FB|FBgn0036828 - symbol:CG6841 species:7227 "Drosophila m... 152 3.4e-07 1
ASPGD|ASPL0000052140 - symbol:AN0111 species:162425 "Emer... 121 3.9e-07 2
DICTYBASE|DDB_G0280363 - symbol:DDB_G0280363 species:4468... 151 6.6e-07 1
UNIPROTKB|F1N5E9 - symbol:TMTC1 "Uncharacterized protein"... 149 7.3e-07 1
MGI|MGI:3039590 - symbol:Tmtc1 "transmembrane and tetratr... 148 9.3e-07 1
UNIPROTKB|F1SCH5 - symbol:XAB2 "Uncharacterized protein" ... 142 3.7e-06 1
MGI|MGI:1914689 - symbol:Xab2 "XPA binding protein 2" spe... 140 6.1e-06 1
RGD|621217 - symbol:Xab2 "XPA binding protein 2" species:... 140 6.1e-06 1
UNIPROTKB|J9PAI6 - symbol:XAB2 "Uncharacterized protein" ... 138 9.3e-06 1
UNIPROTKB|Q888C3 - symbol:PSPTO_1107 "TPR domain protein"... 136 9.7e-06 1
UNIPROTKB|F5H315 - symbol:XAB2 "Pre-mRNA-splicing factor ... 138 1.0e-05 1
UNIPROTKB|E2RPV4 - symbol:XAB2 "Uncharacterized protein" ... 138 1.0e-05 1
UNIPROTKB|Q9HCS7 - symbol:XAB2 "Pre-mRNA-splicing factor ... 138 1.0e-05 1
WB|WBGene00013343 - symbol:prp-6 species:6239 "Caenorhabd... 137 1.5e-05 1
CGD|CAL0001343 - symbol:orf19.6356 species:5476 "Candida ... 136 1.8e-05 1
UNIPROTKB|Q59PD7 - symbol:PRP6 "Putative uncharacterized ... 136 1.8e-05 1
UNIPROTKB|F6RY07 - symbol:XAB2 "Uncharacterized protein" ... 135 2.2e-05 1
UNIPROTKB|Q8IUR5 - symbol:TMTC1 "Transmembrane and TPR re... 135 2.2e-05 1
RGD|1564868 - symbol:Tmtc1 "transmembrane and tetratricop... 135 2.3e-05 1
WB|WBGene00018175 - symbol:F38B6.6 species:6239 "Caenorha... 133 2.7e-05 1
ZFIN|ZDB-GENE-040426-685 - symbol:xab2 "XPA binding prote... 132 4.5e-05 1
UNIPROTKB|A7MB10 - symbol:PDCD11 "Protein RRP5 homolog" s... 135 5.4e-05 1
UNIPROTKB|G5E5C4 - symbol:PDCD11 "Protein RRP5 homolog" s... 135 5.4e-05 1
GENEDB_PFALCIPARUM|PFD0180c - symbol:PFD0180c "CGI-201 pr... 130 6.7e-05 1
UNIPROTKB|Q8I1Z2 - symbol:PFD0180c "CGI-201 protein, shor... 130 6.7e-05 1
UNIPROTKB|F1NX56 - symbol:OGT "Uncharacterized protein" s... 131 7.4e-05 1
UNIPROTKB|Q5LPE5 - symbol:SPO2903 "TPR/sulfotransferase d... 128 7.4e-05 1
TIGR_CMR|SPO_2903 - symbol:SPO_2903 "TPR/sulfotransferase... 128 7.4e-05 1
ZFIN|ZDB-GENE-030131-9631 - symbol:ogt.1 "O-linked N-acet... 131 7.7e-05 1
CGD|CAL0004743 - symbol:orf19.332 species:5476 "Candida a... 107 0.00010 2
WB|WBGene00016837 - symbol:C50F2.3 species:6239 "Caenorha... 128 0.00012 1
UNIPROTKB|P91175 - symbol:C50F2.3 "Protein C50F2.3" speci... 128 0.00012 1
FB|FBgn0033859 - symbol:CG6197 species:7227 "Drosophila m... 128 0.00013 1
UNIPROTKB|A5D7G1 - symbol:OGT "OGT protein" species:9913 ... 128 0.00016 1
RGD|62060 - symbol:Ogt "O-linked N-acetylglucosamine (Glc... 128 0.00016 1
UNIPROTKB|E2QSQ5 - symbol:OGT "Uncharacterized protein" s... 128 0.00016 1
UNIPROTKB|O15294 - symbol:OGT "UDP-N-acetylglucosamine--p... 128 0.00016 1
UNIPROTKB|F1RSV2 - symbol:OGT "UDP-N-acetylglucosamine--p... 128 0.00016 1
UNIPROTKB|Q27HV0 - symbol:OGT "UDP-N-acetylglucosamine--p... 128 0.00016 1
UNIPROTKB|P81436 - symbol:OGT "UDP-N-acetylglucosamine--p... 128 0.00016 1
MGI|MGI:1339639 - symbol:Ogt "O-linked N-acetylglucosamin... 128 0.00016 1
POMBASE|SPCC1183.07 - symbol:SPCC1183.07 "U3 snoRNP-assoc... 130 0.00017 1
UNIPROTKB|Q74DZ8 - symbol:GSU1166 "TPR domain protein" sp... 119 0.00018 1
TIGR_CMR|GSU_1166 - symbol:GSU_1166 "TPR domain protein" ... 119 0.00018 1
ZFIN|ZDB-GENE-070105-3 - symbol:ttc7b "tetratricopeptide ... 116 0.00019 2
UNIPROTKB|P73091 - symbol:slr2048 "Slr2048 protein" speci... 121 0.00024 1
UNIPROTKB|F1P3T9 - symbol:PDCD11 "Uncharacterized protein... 125 0.00037 2
UNIPROTKB|F1NQ36 - symbol:CDC23 "Uncharacterized protein"... 121 0.00044 1
UNIPROTKB|Q71ZG0 - symbol:LMOf2365_1529 "TPR domain prote... 112 0.00068 1
UNIPROTKB|Q233J3 - symbol:TTHERM_00391570 "DNA polymerase... 125 0.00082 1
UNIPROTKB|F1RH91 - symbol:CDC23 "Uncharacterized protein"... 118 0.00095 1
UNIPROTKB|A1A4R8 - symbol:CDC23 "Cell division cycle prot... 118 0.00096 1
UNIPROTKB|E2RHG6 - symbol:CDC23 "Uncharacterized protein"... 118 0.00096 1
UNIPROTKB|Q9UJX2 - symbol:CDC23 "Cell division cycle prot... 118 0.00096 1
>TAIR|locus:2086132 [details] [associations]
symbol:HCF107 "high chlorophyll fluorescent 107"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0006396 "RNA processing" evidence=IEA;IMP]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0006417 "regulation
of translation" evidence=RCA;IMP] [GO:0009657 "plastid
organization" evidence=RCA;IMP] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0005774 "vacuolar membrane" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=RCA] [GO:0009902
"chloroplast relocation" evidence=RCA] [GO:0009965 "leaf
morphogenesis" evidence=RCA] [GO:0010027 "thylakoid membrane
organization" evidence=RCA] [GO:0010207 "photosystem II assembly"
evidence=RCA] [GO:0030154 "cell differentiation" evidence=RCA]
[GO:0034660 "ncRNA metabolic process" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA] [GO:0042793
"transcription from plastid promoter" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR003107 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
SMART:SM00386 GO:GO:0005774 EMBL:CP002686 GO:GO:0006417
GO:GO:0009941 GO:GO:0006396 GO:GO:0009657 Gene3D:1.25.40.10
InterPro:IPR013105 Pfam:PF07719 EMBL:AY093112 EMBL:BT008405
IPI:IPI00517465 RefSeq:NP_188329.1 UniGene:At.22706
ProteinModelPortal:Q8RWG2 SMR:Q8RWG2 STRING:Q8RWG2 PaxDb:Q8RWG2
PRIDE:Q8RWG2 EnsemblPlants:AT3G17040.1 GeneID:820961
KEGG:ath:AT3G17040 TAIR:At3g17040 eggNOG:NOG300398
InParanoid:Q8RWG2 OMA:MEWKEGN PhylomeDB:Q8RWG2
ProtClustDB:CLSN2684191 ArrayExpress:Q8RWG2 Genevestigator:Q8RWG2
Uniprot:Q8RWG2
Length = 652
Score = 1787 (634.1 bits), Expect = 3.2e-184, P = 3.2e-184
Identities = 332/445 (74%), Positives = 384/445 (86%)
Query: 2 KCIDYWPEDGRPYVALGKVLSKQSKVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGN 61
KCI YWPEDGRPYVALGK+LSKQSK+AEAR +Y KG Q+TQGEN YIWQCWAVLEN+LGN
Sbjct: 193 KCIAYWPEDGRPYVALGKILSKQSKLAEARILYEKGCQSTQGENSYIWQCWAVLENRLGN 252
Query: 62 IGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLA 121
+ +ARELFDA+TVADK H+AAWHGWA LE++QGNI KAR LLAKGLKFCG NEYIYQTLA
Sbjct: 253 VRRARELFDAATVADKKHVAAWHGWANLEIKQGNISKARNLLAKGLKFCGRNEYIYQTLA 312
Query: 122 LLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKN 181
LLEAKA RYEQAR LF+QAT CN +SCASW+AW+Q+E+QQE AAR+LFE+AVQASPKN
Sbjct: 313 LLEAKAGRYEQARYLFKQATICNSRSCASWLAWAQLEIQQERYPAARKLFEKAVQASPKN 372
Query: 182 RFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRR 241
RFAWHVWG+FEA +G +++G+KLLKIGHA+NPRDPVLLQSL LLEYK+S+ANLAR L RR
Sbjct: 373 RFAWHVWGVFEAGVGNVERGRKLLKIGHALNPRDPVLLQSLGLLEYKHSSANLARALLRR 432
Query: 242 ASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQRVG 301
ASE+DPRHQPVWIAWGWMEWKEGN TARELY+RALSID+ TESA+RCLQAWGVLEQR G
Sbjct: 433 ASELDPRHQPVWIAWGWMEWKEGNTTTARELYQRALSIDANTESASRCLQAWGVLEQRAG 492
Query: 302 NLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEIRNLYFQQRTEVVDDASWV 361
NLSAARRLFRSSLNINSQSY+TWMTWAQLEEDQG++ RAEEIRNLYFQQRTEVVDDASWV
Sbjct: 493 NLSAARRLFRSSLNINSQSYVTWMTWAQLEEDQGDTERAEEIRNLYFQQRTEVVDDASWV 552
Query: 362 MGFMDIIDPALDRIKQLLNLEKSSYKEPSAYSPGDNESTDDEASVSRYSGLYVGNDLESA 421
GF+DIIDPALD +K+LLN +++ + + T D S + D+E+
Sbjct: 553 TGFLDIIDPALDTVKRLLNFGQNNDNNRLTTTLRNMNRTKDSQSNQQPESSAGREDIETG 612
Query: 422 SGFDLDDFIRNKLNLDPDQLDVLLE 446
SGF+LD F+R+KL+LDP +LDV L+
Sbjct: 613 SGFNLDVFLRSKLSLDPLKLDVNLD 637
Score = 264 (98.0 bits), Expect = 8.1e-20, P = 8.1e-20
Identities = 72/252 (28%), Positives = 116/252 (46%)
Query: 92 RQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNP-KSCAS 150
R K A ++L K + + + Y L + +K ++ +AR L+ + + ++
Sbjct: 180 RNFRYKDAEKILEKCIAYWPEDGRPYVALGKILSKQSKLAEARILYEKGCQSTQGENSYI 239
Query: 151 WIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHA 210
W W+ +E + N AR+LF+ A A K+ AWH W E G I K + LL G
Sbjct: 240 WQCWAVLENRLGNVRRARELFDAATVADKKHVAAWHGWANLEIKQGNISKARNLLAKGLK 299
Query: 211 VNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTAR 270
R+ + Q+LALLE K AR LF++A+ + R W+AW +E ++ AR
Sbjct: 300 FCGRNEYIYQTLALLEAKAGRYEQARYLFKQATICNSRSCASWLAWAQLEIQQERYPAAR 359
Query: 271 ELYERALSIDSTTESAARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQL 330
+L+E+A+ A WGV E VGN+ R+L + +N + + + L
Sbjct: 360 KLFEKAVQASPKNRFA---WHVWGVFEAGVGNVERGRKLLKIGHALNPRDPVLLQSLGLL 416
Query: 331 E--EDQGNSVRA 340
E N RA
Sbjct: 417 EYKHSSANLARA 428
Score = 200 (75.5 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 56/229 (24%), Positives = 103/229 (44%)
Query: 120 LALLEAKA---N-RYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAV 175
L+L +AK N RY+ A + + P+ ++A ++ +Q AR L+E+
Sbjct: 170 LSLYKAKVLARNFRYKDAEKILEKCIAYWPEDGRPYVALGKILSKQSKLAEARILYEKGC 229
Query: 176 QASP-KNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANL 234
Q++ +N + W W + E +G + + ++L + + A LE K +
Sbjct: 230 QSTQGENSYIWQCWAVLENRLGNVRRARELFDAATVADKKHVAAWHGWANLEIKQGNISK 289
Query: 235 ARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWG 294
AR L + + R++ ++ +E K G + AR L+++A +S S A L AW
Sbjct: 290 ARNLLAKGLKFCGRNEYIYQTLALLEAKAGRYEQARYLFKQATICNS--RSCASWL-AWA 346
Query: 295 VLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEI 343
LE + AAR+LF ++ + ++ W W E GN R ++
Sbjct: 347 QLEIQQERYPAARKLFEKAVQASPKNRFAWHVWGVFEAGVGNVERGRKL 395
>TAIR|locus:2128751 [details] [associations]
symbol:EMB2770 "EMBRYO DEFECTIVE 2770" species:3702
"Arabidopsis thaliana" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA;ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA;IDA] [GO:0006396 "RNA
processing" evidence=IEA] [GO:0009409 "response to cold"
evidence=IMP] InterPro:IPR003107 InterPro:IPR010491
InterPro:IPR011990 InterPro:IPR013026 Pfam:PF06424 PROSITE:PS50293
SMART:SM00386 GO:GO:0005634 EMBL:CP002687 GO:GO:0009409
Gene3D:1.25.40.10 InterPro:IPR019955 PROSITE:PS50053 GO:GO:0000398
EMBL:AL161496 EMBL:AF071527 GO:GO:0019252 HOGENOM:HOG000116247
KO:K12855 OMA:IWLRAAY InterPro:IPR027108 PANTHER:PTHR11246:SF1
GO:GO:0009568 EMBL:AY059720 EMBL:AY142510 IPI:IPI00530735
PIR:E85043 RefSeq:NP_192252.1 UniGene:At.3947
ProteinModelPortal:Q9ZT71 SMR:Q9ZT71 STRING:Q9ZT71 PRIDE:Q9ZT71
EnsemblPlants:AT4G03430.1 GeneID:827925 KEGG:ath:AT4G03430
TAIR:At4g03430 InParanoid:Q9ZT71 PhylomeDB:Q9ZT71
ProtClustDB:CLSN2685941 Genevestigator:Q9ZT71 Uniprot:Q9ZT71
Length = 1029
Score = 212 (79.7 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 67/275 (24%), Positives = 122/275 (44%)
Query: 8 PEDGRPYVALGKVLSKQSKVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARE 67
P ++A K+ + + AR + AK + +G +W A++E +LGN+ + R
Sbjct: 724 PNSEEIWLAAFKLEFENKEPERARMLLAKARE--RGGTERVWMKSAIVERELGNVEEERR 781
Query: 68 LFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKA 127
L + W LE R ++++AR+ GLK C ++ +LA LE K
Sbjct: 782 LLNEGLKQFPTFFKLWLMLGQLEERFKHLEQARKAYDTGLKHCPHCIPLWLSLADLEEKV 841
Query: 128 NRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHV 187
N +AR + A K NP W+A + E++ +N A L +A+Q PK+ W
Sbjct: 842 NGLNKARAILTTARKKNPGGAELWLAAIRAELRHDNKREAEHLMSKALQDCPKSGILW-- 899
Query: 188 WGIFEANMGFIDKGKKLLKIGHAVNP--RDPVLLQSLALLEYKYSTANLARKLFRRASEI 245
A++ + ++ K A+ RDP + ++A L ++ AR F RA +
Sbjct: 900 ----AADIEMAPRPRRKTKSIDAMKKCDRDPHVTIAVAKLFWQDKKVEKARAWFERAVTV 955
Query: 246 DPRHQPVWIAWGWMEWKEGNLDTARELYERALSID 280
P W + E + G+ + +E+ + ++ +
Sbjct: 956 GPDIGDFWALFYKFELQHGSDEDRKEVVAKCVACE 990
Score = 148 (57.2 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 71/344 (20%), Positives = 132/344 (38%)
Query: 16 ALGKVLSKQSKVAEARAIYAKGSQATQGENPYI----WQCWAVLENKLGNIGKARELFDA 71
A GK+ A I +G + Q E I W A ++G++ + +
Sbjct: 554 ANGKLDEANDNTAMVGKIIDRGIKTLQREGVVIDRENWMSEAEACERVGSVATCQAIIKN 613
Query: 72 ST---VADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKAN 128
+ V ++ W A ++G+I+ AR + A L + I+ A LE
Sbjct: 614 TIGIGVEEEDRKRTWVADADECKKRGSIETARAIYAHALSVFLTKKSIWLKAAQLEKSHG 673
Query: 129 RYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVW 188
E L R+A P++ W+ ++ + + AAR + + A A P + W
Sbjct: 674 SRESLDALLRKAVTYVPQAEVLWLMGAKEKWLAGDVPAARAILQEAYAAIPNSEEIWLAA 733
Query: 189 GIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDPR 248
E ++ + LL + V ++S A++E + R+L + P
Sbjct: 734 FKLEFENKEPERARMLLAKARERGGTERVWMKS-AIVERELGNVEEERRLLNEGLKQFPT 792
Query: 249 HQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAW---GVLEQRVGNLSA 305
+W+ G +E + +L+ AR+ Y+ L + C+ W LE++V L+
Sbjct: 793 FFKLWLMLGQLEERFKHLEQARKAYDTGL------KHCPHCIPLWLSLADLEEKVNGLNK 846
Query: 306 ARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEIRNLYFQ 349
AR + ++ N W+ + E N AE + + Q
Sbjct: 847 ARAILTTARKKNPGGAELWLAAIRAELRHDNKREAEHLMSKALQ 890
Score = 138 (53.6 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 66/267 (24%), Positives = 104/267 (38%)
Query: 12 RPYVALGKVLSKQSKVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARELF-D 70
R +VA K+ + ARAIYA + IW A LE G+ L
Sbjct: 626 RTWVADADECKKRGSIETARAIYAHALSVFLTKKS-IWLKAAQLEKSHGSRESLDALLRK 684
Query: 71 ASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKANRY 130
A T + + W A + G++ AR +L + +E I+ LE +
Sbjct: 685 AVTYVPQAEVL-WLMGAKEKWLAGDVPAARAILQEAYAAIPNSEEIWLAAFKLEFENKEP 743
Query: 131 EQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVWGI 190
E+AR L +A + W+ + +E + N R+L ++ P W + G
Sbjct: 744 ERARMLLAKARERGGTERV-WMKSAIVERELGNVEEERRLLNEGLKQFPTFFKLWLMLGQ 802
Query: 191 FEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDPRHQ 250
E +++ +K G P L SLA LE K + N AR + A + +P
Sbjct: 803 LEERFKHLEQARKAYDTGLKHCPHCIPLWLSLADLEEKVNGLNKARAILTTARKKNPGGA 862
Query: 251 PVWIAWGWMEWKEGNLDTARELYERAL 277
+W+A E + N A L +AL
Sbjct: 863 ELWLAAIRAELRHDNKREAEHLMSKAL 889
Score = 134 (52.2 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 79/346 (22%), Positives = 136/346 (39%)
Query: 14 YVALGKVLSKQSKVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARE------ 67
++ L L++ AE++ + K + E P IW A LE G + +A +
Sbjct: 511 HLELWVALARLETYAESKKVLNKAREKLPKE-PAIWITAAKLEEANGKLDEANDNTAMVG 569
Query: 68 -LFDAS--TVADKGHIAAWHGW-AVLEL--RQGNIKKARQLLAKGLKFCGGNEYIYQTLA 121
+ D T+ +G + W + E R G++ Q + K G E +
Sbjct: 570 KIIDRGIKTLQREGVVIDRENWMSEAEACERVGSVATC-QAIIKNTIGIGVEEEDRKRTW 628
Query: 122 LLEA----KANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQA 177
+ +A K E AR ++ A + W+ +Q+E + + L +AV
Sbjct: 629 VADADECKKRGSIETARAIYAHALSVFLTKKSIWLKAAQLEKSHGSRESLDALLRKAVTY 688
Query: 178 SPKNRFAWHVWGIFEANM-GFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLAR 236
P+ W + G E + G + + +L+ +A P + + LE++ AR
Sbjct: 689 VPQAEVLW-LMGAKEKWLAGDVPAARAILQEAYAAIPNSEEIWLAAFKLEFENKEPERAR 747
Query: 237 KLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVL 296
L +A E + VW+ +E + GN++ R L L T L G L
Sbjct: 748 MLLAKARERGGTER-VWMKSAIVERELGNVEEERRLLNEGLKQFPTFFKLWLML---GQL 803
Query: 297 EQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEED-QG-NSVRA 340
E+R +L AR+ + + L W++ A LEE G N RA
Sbjct: 804 EERFKHLEQARKAYDTGLKHCPHCIPLWLSLADLEEKVNGLNKARA 849
Score = 128 (50.1 bits), Expect = 0.00016, P = 0.00016
Identities = 47/201 (23%), Positives = 88/201 (43%)
Query: 14 YVALGKVLSKQSKVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARELFDAST 73
++ LG++ + + +AR Y G + P +W A LE K+ + KAR + +
Sbjct: 797 WLMLGQLEERFKHLEQARKAYDTGLKHCPHCIP-LWLSLADLEEKVNGLNKARAILTTAR 855
Query: 74 VADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKANRYEQA 133
+ G W ELR N ++A L++K L+ C + ++ + + R ++
Sbjct: 856 KKNPGGAELWLAAIRAELRHDNKREAEHLMSKALQDCPKSGILWAADIEMAPRPRRKTKS 915
Query: 134 RNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVWGIFEA 193
+ + KC+ + IA +++ Q + AR FERAV P W ++ FE
Sbjct: 916 IDAMK---KCDRDPHVT-IAVAKLFWQDKKVEKARAWFERAVTVGPDIGDFWALFYKFEL 971
Query: 194 NMGFIDKGKKLLKIGHAVNPR 214
G + K+++ A P+
Sbjct: 972 QHGSDEDRKEVVAKCVACEPK 992
Score = 125 (49.1 bits), Expect = 0.00033, P = 0.00033
Identities = 69/297 (23%), Positives = 127/297 (42%)
Query: 64 KARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALL 123
+AR L+ + T ++ + W A +E G IK AR + +G + C NE ++ L
Sbjct: 371 RARLLYKSLTQSNPKNPNGWIAAARVEEVDGKIKAARFQIQRGCEECPKNEDVWLEACRL 430
Query: 124 EAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRF 183
AN E A+ + + K P S W+ +++E EN +R L + ++ P +
Sbjct: 431 ---ANP-EDAKGVIAKGVKLIPNSVKLWLEAAKLEHDVENK--SRVL-RKGLEHIPDSVR 483
Query: 184 AWHVWGIFE-ANMGFIDKGKKLLKIGHAVN--PRDPVLLQSLALLEYKYSTANLARKLFR 240
W + E AN ++ ++L + AV P L +LA LE Y+ + +K+
Sbjct: 484 LWKA--VVELAN----EEDARIL-LHRAVECCPLHLELWVALARLE-TYAES---KKVLN 532
Query: 241 RASEIDPRHQPVWIAWGWMEWKEGNLDTARE-------LYERALSIDSTTESAARCLQAW 293
+A E P+ +WI +E G LD A + + +R + E + W
Sbjct: 533 KAREKLPKEPAIWITAAKLEEANGKLDEANDNTAMVGKIIDRGIKT-LQREGVVIDRENW 591
Query: 294 -GVLE--QRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEIRNLY 347
E +RVG+++ + + ++++ I + TW ++ E R +Y
Sbjct: 592 MSEAEACERVGSVATCQAIIKNTIGIGVEEEDRKRTWVADADECKKRGSIETARAIY 648
>UNIPROTKB|J9P5Z1 [details] [associations]
symbol:CRNKL1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006396 "RNA processing" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR003107
InterPro:IPR011990 InterPro:IPR013026 Pfam:PF02184 PROSITE:PS50293
SMART:SM00386 GO:GO:0005622 GO:GO:0006396 Gene3D:1.25.40.10
GeneTree:ENSGT00550000074931 EMBL:AAEX03013754
Ensembl:ENSCAFT00000047479 Uniprot:J9P5Z1
Length = 728
Score = 201 (75.8 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 71/295 (24%), Positives = 134/295 (45%)
Query: 64 KARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALL 123
+ R+ F+ + ++ I+ W +A E I++AR + + L N ++ A +
Sbjct: 106 RKRKTFEDNIRKNRTVISNWIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEM 165
Query: 124 EAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRF 183
E K + ARN++ +A P+ W ++ ME N ARQ+FER ++ P+ +
Sbjct: 166 EMKNRQVNHARNIWDRAITTLPRVNQFWYKYTYMEEMLGNIAGARQVFERWMEWQPEEQ- 224
Query: 184 AWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRAS 243
AWH + FE +D+ + + + V+P D A E K+ ARK++ RA
Sbjct: 225 AWHSYINFELRYKEVDRARTIYERFVLVHP-DVKNWIKYARFEEKHGYFAHARKVYERAV 283
Query: 244 EI-DPRH--QPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQRV 300
E H + +++A+ E + + R +Y+ AL S E A + + + E++
Sbjct: 284 EFFGDEHMDEHLYVAFAKFEENQKEFERVRVIYKYALDRISKQE-AQELFKNYTIFEKKF 342
Query: 301 GN------LSAARRLFR--SSLNINSQSYITWMTWAQLEEDQGNSVRAEEIRNLY 347
G+ + ++R F+ + N +Y W + +L E + AE +R +Y
Sbjct: 343 GDRRGIEDIIVSKRRFQYEEEVKANPHNYDAWFDYLRLVE---SDAEAETVREVY 394
Score = 162 (62.1 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 55/267 (20%), Positives = 122/267 (45%)
Query: 26 KVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARELFD-ASTVADKGHIAAWH 84
++ AR+IY + N +W +A +E K + AR ++D A T + + W+
Sbjct: 137 EIQRARSIYERALDVDY-RNITLWLKYAEMEMKNRQVNHARNIWDRAITTLPRVN-QFWY 194
Query: 85 GWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCN 144
+ +E GNI ARQ+ + +++ E + + E + ++AR ++ + +
Sbjct: 195 KYTYMEEMLGNIAGARQVFERWMEW-QPEEQAWHSYINFELRYKEVDRARTIYERFVLVH 253
Query: 145 PKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVW---GIFEANMGFIDKG 201
P +WI +++ E + AR+++ERAV+ H++ FE N ++
Sbjct: 254 P-DVKNWIKYARFEEKHGYFAHARKVYERAVEFFGDEHMDEHLYVAFAKFEENQKEFERV 312
Query: 202 KKLLKIG-HAVNPRDPV-LLQSLALLEYKYSTAN------LARKLFRRASEI--DPRHQP 251
+ + K ++ ++ L ++ + E K+ ++++ F+ E+ +P +
Sbjct: 313 RVIYKYALDRISKQEAQELFKNYTIFEKKFGDRRGIEDIIVSKRRFQYEEEVKANPHNYD 372
Query: 252 VWIAWGWMEWKEGNLDTARELYERALS 278
W + + + +T RE+YERA++
Sbjct: 373 AWFDYLRLVESDAEAETVREVYERAIA 399
Score = 159 (61.0 bits), Expect = 9.2e-09, Sum P(2) = 9.2e-09
Identities = 62/248 (25%), Positives = 117/248 (47%)
Query: 77 KGHIAAWHGWAVLE-LRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARN 135
K +I W +A+ E L + ++ RQ+ L+ ++ + + LL A+ ++
Sbjct: 411 KRYIYLWVNYALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWLLYAQFEIRQKNLP 470
Query: 136 LFRQAT-----KCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVWGI 190
R+A KC PK+ + + ++E+Q R+L+E+ ++ P+N +W +
Sbjct: 471 FARRALGTSIGKC-PKN-KLFKGYIELELQLREFDRCRKLYEKFLEFGPENCTSWIKFAE 528
Query: 191 FEANMGFIDKGKKLLKIGHAVNPR-D-P-VLLQSLALLEYKYSTANLARKLFRRASEIDP 247
E +G I++ + + ++ + PR D P VL +S E + R L+RR +
Sbjct: 529 LETILGDIERARAIYELAIS-QPRLDMPEVLWKSYIDFEIEQEETERTRNLYRRLLQ-RT 586
Query: 248 RHQPVWIAWGWMEW---KEGNLDTARELYERA-LSIDSTTESAARC--LQAWGVLEQRVG 301
+H VWI++ E KEG+L R++YE A ++ + E R L++W E G
Sbjct: 587 QHVKVWISFAQFELSSRKEGSLAKCRQIYEEANKTMRNCEEKEERLMLLESWRSFEDEFG 646
Query: 302 NLSAARRL 309
+S R+
Sbjct: 647 TVSDKERV 654
Score = 131 (51.2 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 35/139 (25%), Positives = 73/139 (52%)
Query: 47 YIWQCWAVLEN-KLGNIGKARELFDAST--VADKGHIAA--WHGWAVLELRQGNIKKARQ 101
Y+W +A+ E + + + R+++ AS + K A W +A E+RQ N+ AR+
Sbjct: 415 YLWVNYALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWLLYAQFEIRQKNLPFARR 474
Query: 102 LLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQ 161
L + C N+ +++ LE + +++ R L+ + + P++C SWI ++++E
Sbjct: 475 ALGTSIGKCPKNK-LFKGYIELELQLREFDRCRKLYEKFLEFGPENCTSWIKFAELETIL 533
Query: 162 ENNLAARQLFERAVQASPK 180
+ AR ++E A+ + P+
Sbjct: 534 GDIERARAIYELAI-SQPR 551
Score = 120 (47.3 bits), Expect = 8.3e-08, Sum P(2) = 8.3e-08
Identities = 36/157 (22%), Positives = 71/157 (45%)
Query: 49 WQCWAVLENKLGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLK 108
W +A E L I +AR +++ + D +I W +A +E++ + AR + + +
Sbjct: 125 WIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEMEMKNRQVNHARNIWDRAIT 184
Query: 109 FCGG-NEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAA 167
N++ Y+ + E N AR +F + + P+ A W ++ E++ + A
Sbjct: 185 TLPRVNQFWYKYTYMEEMLGN-IAGARQVFERWMEWQPEEQA-WHSYINFELRYKEVDRA 242
Query: 168 RQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKL 204
R ++ER V P + W + FE G+ +K+
Sbjct: 243 RTIYERFVLVHPDVK-NWIKYARFEEKHGYFAHARKV 278
Score = 119 (46.9 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 41/202 (20%), Positives = 86/202 (42%)
Query: 151 WIAWSQME-MQQENNLAARQLFERAVQASPKNRFA----WHVWGIFEANMGFIDKGKKLL 205
W+ ++ E ++ ++ RQ+++ +++ P +F W ++ FE + ++ L
Sbjct: 417 WVNYALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWLLYAQFEIRQKNLPFARRAL 476
Query: 206 KIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGN 265
P++ L + LE + + RKL+ + E P + WI + +E G+
Sbjct: 477 GTSIGKCPKNK-LFKGYIELELQLREFDRCRKLYEKFLEFGPENCTSWIKFAELETILGD 535
Query: 266 LDTARELYERALSIDSTTESAARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWM 325
++ AR +YE A+S + +++ E R L+R L +Q W+
Sbjct: 536 IERARAIYELAIS-QPRLDMPEVLWKSYIDFEIEQEETERTRNLYRRLLQ-RTQHVKVWI 593
Query: 326 TWAQLEEDQGNSVRAEEIRNLY 347
++AQ E + R +Y
Sbjct: 594 SFAQFELSSRKEGSLAKCRQIY 615
Score = 84 (34.6 bits), Expect = 8.3e-08, Sum P(2) = 8.3e-08
Identities = 28/129 (21%), Positives = 56/129 (43%)
Query: 236 RKLFRRASEIDPRHQ----PVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQ 291
R++++ + E+ P + +W+ + E ++ NL AR RAL + +
Sbjct: 435 RQVYQASLELIPHKKFTFAKMWLLYAQFEIRQKNLPFAR----RALGTSIGKCPKNKLFK 490
Query: 292 AWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEIRNLYFQQR 351
+ LE ++ R+L+ L ++ +W+ +A+LE G+ RA I L Q
Sbjct: 491 GYIELELQLREFDRCRKLYEKFLEFGPENCTSWIKFAELETILGDIERARAIYELAISQP 550
Query: 352 TEVVDDASW 360
+ + W
Sbjct: 551 RLDMPEVLW 559
Score = 52 (23.4 bits), Expect = 9.2e-09, Sum P(2) = 9.2e-09
Identities = 20/107 (18%), Positives = 41/107 (38%)
Query: 10 DGRPYVALGKVLSKQSKVAEARAIYAKG-SQATQGENPYIWQCWAVLENKLGN------- 61
D YVA K Q + R IY + ++ E +++ + + E K G+
Sbjct: 292 DEHLYVAFAKFEENQKEFERVRVIYKYALDRISKQEAQELFKNYTIFEKKFGDRRGIEDI 351
Query: 62 -IGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGL 107
+ K R ++ A+ + AW + L + R++ + +
Sbjct: 352 IVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDAEAETVREVYERAI 398
>UNIPROTKB|Q5JY65 [details] [associations]
symbol:CRNKL1 "Crooked neck-like protein 1" species:9606
"Homo sapiens" [GO:0005622 "intracellular" evidence=IEA]
[GO:0006396 "RNA processing" evidence=IEA] InterPro:IPR003107
InterPro:IPR011990 InterPro:IPR013026 Pfam:PF02184 PROSITE:PS50293
SMART:SM00386 GO:GO:0005622 GO:GO:0006396 Gene3D:1.25.40.10
HOGENOM:HOG000207972 EMBL:AL035454 IPI:IPI00219317
UniGene:Hs.171342 HGNC:HGNC:15762 HOVERGEN:HBG051046
OrthoDB:EOG4SJ5DC SMR:Q5JY65 IntAct:Q5JY65 Ensembl:ENST00000377327
Uniprot:Q5JY65
Length = 836
Score = 200 (75.5 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 70/295 (23%), Positives = 135/295 (45%)
Query: 64 KARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALL 123
+ R+ F+ + ++ I+ W +A E I++AR + + L N ++ A +
Sbjct: 214 RKRKTFEDNIRKNRTVISNWIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEM 273
Query: 124 EAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRF 183
E K + ARN++ +A P+ W ++ ME N ARQ+FER ++ P+ +
Sbjct: 274 EMKNRQVNHARNIWDRAITTLPRVNQFWYKYTYMEEMLGNVAGARQVFERWMEWQPEEQ- 332
Query: 184 AWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRAS 243
AWH + FE +D+ + + + V+P D A E K++ ARK++ RA
Sbjct: 333 AWHSYINFELRYKEVDRARTIYERFVLVHP-DVKNWIKYARFEEKHAYFAHARKVYERAV 391
Query: 244 EI-DPRH--QPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQRV 300
E H + +++A+ E + + R +Y+ AL S + A + + + E++
Sbjct: 392 EFFGDEHMDEHLYVAFAKFEENQKEFERVRVIYKYALDRISK-QDAQELFKNYTIFEKKF 450
Query: 301 GN------LSAARRLFR--SSLNINSQSYITWMTWAQLEEDQGNSVRAEEIRNLY 347
G+ + ++R F+ + N +Y W + +L E + AE +R +Y
Sbjct: 451 GDRRGIEDIIVSKRRFQYEEEVKANPHNYDAWFDYLRLVE---SDAEAEAVREVY 502
Score = 169 (64.5 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 63/248 (25%), Positives = 119/248 (47%)
Query: 77 KGHIAAWHGWAVLE-LRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARN 135
K +I W +A+ E L + ++ RQ+ L+ ++ + + +L A+ ++ +
Sbjct: 519 KRYIYLWINYALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWILYAQFEIRQKNLS 578
Query: 136 LFRQAT-----KCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVWGI 190
L R+A KC PK+ + + ++E+Q R+L+E+ ++ P+N +W +
Sbjct: 579 LARRALGTSIGKC-PKN-KLFKVYIELELQLREFDRCRKLYEKFLEFGPENCTSWIKFAE 636
Query: 191 FEANMGFIDKGKKLLKIGHAVNPR-D-P-VLLQSLALLEYKYSTANLARKLFRRASEIDP 247
E +G ID+ + + ++ + PR D P VL +S E + R L+RR +
Sbjct: 637 LETILGDIDRARAIYELAIS-QPRLDMPEVLWKSYIDFEIEQEETERTRNLYRRLLQ-RT 694
Query: 248 RHQPVWIAWGWMEW---KEGNLDTARELYERA-LSIDSTTESAARC--LQAWGVLEQRVG 301
+H VWI++ E KEG+L R++YE A ++ + E R L++W E+ G
Sbjct: 695 QHVKVWISFAQFELSSGKEGSLTKCRQIYEEANKTMRNCEEKEERLMLLESWRSFEEEFG 754
Query: 302 NLSAARRL 309
S R+
Sbjct: 755 TASDKERV 762
Score = 161 (61.7 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 54/267 (20%), Positives = 121/267 (45%)
Query: 26 KVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARELFD-ASTVADKGHIAAWH 84
++ AR+IY + N +W +A +E K + AR ++D A T + + W+
Sbjct: 245 EIQRARSIYERALDVDY-RNITLWLKYAEMEMKNRQVNHARNIWDRAITTLPRVN-QFWY 302
Query: 85 GWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCN 144
+ +E GN+ ARQ+ + +++ E + + E + ++AR ++ + +
Sbjct: 303 KYTYMEEMLGNVAGARQVFERWMEW-QPEEQAWHSYINFELRYKEVDRARTIYERFVLVH 361
Query: 145 PKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVW---GIFEANMGFIDKG 201
P +WI +++ E + AR+++ERAV+ H++ FE N ++
Sbjct: 362 P-DVKNWIKYARFEEKHAYFAHARKVYERAVEFFGDEHMDEHLYVAFAKFEENQKEFERV 420
Query: 202 KKLLKIG-HAVNPRDPV-LLQSLALLEYKYSTAN------LARKLFRRASEI--DPRHQP 251
+ + K ++ +D L ++ + E K+ ++++ F+ E+ +P +
Sbjct: 421 RVIYKYALDRISKQDAQELFKNYTIFEKKFGDRRGIEDIIVSKRRFQYEEEVKANPHNYD 480
Query: 252 VWIAWGWMEWKEGNLDTARELYERALS 278
W + + + + RE+YERA++
Sbjct: 481 AWFDYLRLVESDAEAEAVREVYERAIA 507
Score = 133 (51.9 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 66/300 (22%), Positives = 126/300 (42%)
Query: 59 LGNIGK--ARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYI 116
L I K A+ELF T+ +K G + + + + ++ A + +Y+
Sbjct: 428 LDRISKQDAQELFKNYTIFEK-KFGDRRGIEDIIVSKRRFQYEEEVKANPHNYDAWFDYL 486
Query: 117 YQTLALLEAKANR--YEQA-RNLFRQATKCNPKSCAS-WIAWSQME-MQQENNLAARQLF 171
+ EA+A R YE+A N+ K + K WI ++ E ++ ++ RQ++
Sbjct: 487 RLVESDAEAEAVREVYERAIANVPPIQEKRHWKRYIYLWINYALYEELEAKDPERTRQVY 546
Query: 172 ERAVQASPKNRFA----WHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEY 227
+ +++ P +F W ++ FE + ++ L P++ L + LE
Sbjct: 547 QASLELIPHKKFTFAKMWILYAQFEIRQKNLSLARRALGTSIGKCPKNK-LFKVYIELEL 605
Query: 228 KYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAA 287
+ + RKL+ + E P + WI + +E G++D AR +YE A+S +
Sbjct: 606 QLREFDRCRKLYEKFLEFGPENCTSWIKFAELETILGDIDRARAIYELAIS-QPRLDMPE 664
Query: 288 RCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEIRNLY 347
+++ E R L+R L +Q W+++AQ E G + R +Y
Sbjct: 665 VLWKSYIDFEIEQEETERTRNLYRRLLQ-RTQHVKVWISFAQFELSSGKEGSLTKCRQIY 723
Score = 114 (45.2 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 35/157 (22%), Positives = 70/157 (44%)
Query: 49 WQCWAVLENKLGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLK 108
W +A E L I +AR +++ + D +I W +A +E++ + AR + + +
Sbjct: 233 WIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEMEMKNRQVNHARNIWDRAIT 292
Query: 109 FCGG-NEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAA 167
N++ Y+ + E N AR +F + + P+ A W ++ E++ + A
Sbjct: 293 TLPRVNQFWYKYTYMEEMLGN-VAGARQVFERWMEWQPEEQA-WHSYINFELRYKEVDRA 350
Query: 168 RQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKL 204
R ++ER V P + W + FE + +K+
Sbjct: 351 RTIYERFVLVHPDVK-NWIKYARFEEKHAYFAHARKV 386
Score = 87 (35.7 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 29/129 (22%), Positives = 56/129 (43%)
Query: 236 RKLFRRASEIDPRHQ----PVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQ 291
R++++ + E+ P + +WI + E ++ NL AR RAL + +
Sbjct: 543 RQVYQASLELIPHKKFTFAKMWILYAQFEIRQKNLSLAR----RALGTSIGKCPKNKLFK 598
Query: 292 AWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEIRNLYFQQR 351
+ LE ++ R+L+ L ++ +W+ +A+LE G+ RA I L Q
Sbjct: 599 VYIELELQLREFDRCRKLYEKFLEFGPENCTSWIKFAELETILGDIDRARAIYELAISQP 658
Query: 352 TEVVDDASW 360
+ + W
Sbjct: 659 RLDMPEVLW 667
Score = 49 (22.3 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 19/107 (17%), Positives = 41/107 (38%)
Query: 10 DGRPYVALGKVLSKQSKVAEARAIYAKG-SQATQGENPYIWQCWAVLENKLGN------- 61
D YVA K Q + R IY + ++ + +++ + + E K G+
Sbjct: 400 DEHLYVAFAKFEENQKEFERVRVIYKYALDRISKQDAQELFKNYTIFEKKFGDRRGIEDI 459
Query: 62 -IGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGL 107
+ K R ++ A+ + AW + L + R++ + +
Sbjct: 460 IVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDAEAEAVREVYERAI 506
>UNIPROTKB|Q9BZJ0 [details] [associations]
symbol:CRNKL1 "Crooked neck-like protein 1" species:9606
"Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0000245 "spliceosomal complex
assembly" evidence=IDA] [GO:0005681 "spliceosomal complex"
evidence=IDA] [GO:0003723 "RNA binding" evidence=IDA] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] InterPro:IPR003107
InterPro:IPR011990 InterPro:IPR013026 Pfam:PF02184 SMART:SM00386
EMBL:AF318303 GO:GO:0005737 GO:GO:0016607 GO:GO:0003723
Gene3D:1.25.40.10 GO:GO:0071013 GO:GO:0000245 eggNOG:NOG327505
KO:K12869 OMA:KFTFAKI EMBL:AF255443 EMBL:AF318302 EMBL:AF318304
EMBL:AF318305 EMBL:AF111802 EMBL:AK023246 EMBL:AK023728
EMBL:AK292799 EMBL:AL035454 EMBL:AK022908 IPI:IPI00177437
IPI:IPI00219317 IPI:IPI00219318 IPI:IPI00219320 IPI:IPI01011870
RefSeq:NP_057736.4 UniGene:Hs.171342 ProteinModelPortal:Q9BZJ0
SMR:Q9BZJ0 IntAct:Q9BZJ0 STRING:Q9BZJ0 PhosphoSite:Q9BZJ0
DMDM:147744555 PaxDb:Q9BZJ0 PRIDE:Q9BZJ0 DNASU:51340
Ensembl:ENST00000377340 Ensembl:ENST00000490910
Ensembl:ENST00000496549 Ensembl:ENST00000536226 GeneID:51340
KEGG:hsa:51340 UCSC:uc002wrs.3 CTD:51340 GeneCards:GC20M019963
H-InvDB:HIX0015678 HGNC:HGNC:15762 MIM:610952 neXtProt:NX_Q9BZJ0
PharmGKB:PA26886 HOVERGEN:HBG051046 InParanoid:Q9BZJ0
GenomeRNAi:51340 NextBio:54782 ArrayExpress:Q9BZJ0 Bgee:Q9BZJ0
Genevestigator:Q9BZJ0 GermOnline:ENSG00000101343 Uniprot:Q9BZJ0
Length = 848
Score = 200 (75.5 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 70/295 (23%), Positives = 135/295 (45%)
Query: 64 KARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALL 123
+ R+ F+ + ++ I+ W +A E I++AR + + L N ++ A +
Sbjct: 226 RKRKTFEDNIRKNRTVISNWIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEM 285
Query: 124 EAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRF 183
E K + ARN++ +A P+ W ++ ME N ARQ+FER ++ P+ +
Sbjct: 286 EMKNRQVNHARNIWDRAITTLPRVNQFWYKYTYMEEMLGNVAGARQVFERWMEWQPEEQ- 344
Query: 184 AWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRAS 243
AWH + FE +D+ + + + V+P D A E K++ ARK++ RA
Sbjct: 345 AWHSYINFELRYKEVDRARTIYERFVLVHP-DVKNWIKYARFEEKHAYFAHARKVYERAV 403
Query: 244 EI-DPRH--QPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQRV 300
E H + +++A+ E + + R +Y+ AL S + A + + + E++
Sbjct: 404 EFFGDEHMDEHLYVAFAKFEENQKEFERVRVIYKYALDRISK-QDAQELFKNYTIFEKKF 462
Query: 301 GN------LSAARRLFR--SSLNINSQSYITWMTWAQLEEDQGNSVRAEEIRNLY 347
G+ + ++R F+ + N +Y W + +L E + AE +R +Y
Sbjct: 463 GDRRGIEDIIVSKRRFQYEEEVKANPHNYDAWFDYLRLVE---SDAEAEAVREVY 514
Score = 169 (64.5 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 63/248 (25%), Positives = 119/248 (47%)
Query: 77 KGHIAAWHGWAVLE-LRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARN 135
K +I W +A+ E L + ++ RQ+ L+ ++ + + +L A+ ++ +
Sbjct: 531 KRYIYLWINYALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWILYAQFEIRQKNLS 590
Query: 136 LFRQAT-----KCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVWGI 190
L R+A KC PK+ + + ++E+Q R+L+E+ ++ P+N +W +
Sbjct: 591 LARRALGTSIGKC-PKN-KLFKVYIELELQLREFDRCRKLYEKFLEFGPENCTSWIKFAE 648
Query: 191 FEANMGFIDKGKKLLKIGHAVNPR-D-P-VLLQSLALLEYKYSTANLARKLFRRASEIDP 247
E +G ID+ + + ++ + PR D P VL +S E + R L+RR +
Sbjct: 649 LETILGDIDRARAIYELAIS-QPRLDMPEVLWKSYIDFEIEQEETERTRNLYRRLLQ-RT 706
Query: 248 RHQPVWIAWGWMEW---KEGNLDTARELYERA-LSIDSTTESAARC--LQAWGVLEQRVG 301
+H VWI++ E KEG+L R++YE A ++ + E R L++W E+ G
Sbjct: 707 QHVKVWISFAQFELSSGKEGSLTKCRQIYEEANKTMRNCEEKEERLMLLESWRSFEEEFG 766
Query: 302 NLSAARRL 309
S R+
Sbjct: 767 TASDKERV 774
Score = 161 (61.7 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 54/267 (20%), Positives = 121/267 (45%)
Query: 26 KVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARELFD-ASTVADKGHIAAWH 84
++ AR+IY + N +W +A +E K + AR ++D A T + + W+
Sbjct: 257 EIQRARSIYERALDVDY-RNITLWLKYAEMEMKNRQVNHARNIWDRAITTLPRVN-QFWY 314
Query: 85 GWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCN 144
+ +E GN+ ARQ+ + +++ E + + E + ++AR ++ + +
Sbjct: 315 KYTYMEEMLGNVAGARQVFERWMEW-QPEEQAWHSYINFELRYKEVDRARTIYERFVLVH 373
Query: 145 PKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVW---GIFEANMGFIDKG 201
P +WI +++ E + AR+++ERAV+ H++ FE N ++
Sbjct: 374 P-DVKNWIKYARFEEKHAYFAHARKVYERAVEFFGDEHMDEHLYVAFAKFEENQKEFERV 432
Query: 202 KKLLKIG-HAVNPRDPV-LLQSLALLEYKYSTAN------LARKLFRRASEI--DPRHQP 251
+ + K ++ +D L ++ + E K+ ++++ F+ E+ +P +
Sbjct: 433 RVIYKYALDRISKQDAQELFKNYTIFEKKFGDRRGIEDIIVSKRRFQYEEEVKANPHNYD 492
Query: 252 VWIAWGWMEWKEGNLDTARELYERALS 278
W + + + + RE+YERA++
Sbjct: 493 AWFDYLRLVESDAEAEAVREVYERAIA 519
Score = 133 (51.9 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 66/300 (22%), Positives = 126/300 (42%)
Query: 59 LGNIGK--ARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYI 116
L I K A+ELF T+ +K G + + + + ++ A + +Y+
Sbjct: 440 LDRISKQDAQELFKNYTIFEK-KFGDRRGIEDIIVSKRRFQYEEEVKANPHNYDAWFDYL 498
Query: 117 YQTLALLEAKANR--YEQA-RNLFRQATKCNPKSCAS-WIAWSQME-MQQENNLAARQLF 171
+ EA+A R YE+A N+ K + K WI ++ E ++ ++ RQ++
Sbjct: 499 RLVESDAEAEAVREVYERAIANVPPIQEKRHWKRYIYLWINYALYEELEAKDPERTRQVY 558
Query: 172 ERAVQASPKNRFA----WHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEY 227
+ +++ P +F W ++ FE + ++ L P++ L + LE
Sbjct: 559 QASLELIPHKKFTFAKMWILYAQFEIRQKNLSLARRALGTSIGKCPKNK-LFKVYIELEL 617
Query: 228 KYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAA 287
+ + RKL+ + E P + WI + +E G++D AR +YE A+S +
Sbjct: 618 QLREFDRCRKLYEKFLEFGPENCTSWIKFAELETILGDIDRARAIYELAIS-QPRLDMPE 676
Query: 288 RCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEIRNLY 347
+++ E R L+R L +Q W+++AQ E G + R +Y
Sbjct: 677 VLWKSYIDFEIEQEETERTRNLYRRLLQ-RTQHVKVWISFAQFELSSGKEGSLTKCRQIY 735
Score = 114 (45.2 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 35/157 (22%), Positives = 70/157 (44%)
Query: 49 WQCWAVLENKLGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLK 108
W +A E L I +AR +++ + D +I W +A +E++ + AR + + +
Sbjct: 245 WIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEMEMKNRQVNHARNIWDRAIT 304
Query: 109 FCGG-NEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAA 167
N++ Y+ + E N AR +F + + P+ A W ++ E++ + A
Sbjct: 305 TLPRVNQFWYKYTYMEEMLGN-VAGARQVFERWMEWQPEEQA-WHSYINFELRYKEVDRA 362
Query: 168 RQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKL 204
R ++ER V P + W + FE + +K+
Sbjct: 363 RTIYERFVLVHPDVK-NWIKYARFEEKHAYFAHARKV 398
Score = 87 (35.7 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 29/129 (22%), Positives = 56/129 (43%)
Query: 236 RKLFRRASEIDPRHQ----PVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQ 291
R++++ + E+ P + +WI + E ++ NL AR RAL + +
Sbjct: 555 RQVYQASLELIPHKKFTFAKMWILYAQFEIRQKNLSLAR----RALGTSIGKCPKNKLFK 610
Query: 292 AWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEIRNLYFQQR 351
+ LE ++ R+L+ L ++ +W+ +A+LE G+ RA I L Q
Sbjct: 611 VYIELELQLREFDRCRKLYEKFLEFGPENCTSWIKFAELETILGDIDRARAIYELAISQP 670
Query: 352 TEVVDDASW 360
+ + W
Sbjct: 671 RLDMPEVLW 679
Score = 49 (22.3 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 19/107 (17%), Positives = 41/107 (38%)
Query: 10 DGRPYVALGKVLSKQSKVAEARAIYAKG-SQATQGENPYIWQCWAVLENKLGN------- 61
D YVA K Q + R IY + ++ + +++ + + E K G+
Sbjct: 412 DEHLYVAFAKFEENQKEFERVRVIYKYALDRISKQDAQELFKNYTIFEKKFGDRRGIEDI 471
Query: 62 -IGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGL 107
+ K R ++ A+ + AW + L + R++ + +
Sbjct: 472 IVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDAEAEAVREVYERAI 518
>ASPGD|ASPL0000053069 [details] [associations]
symbol:AN1259 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006396 "RNA processing"
evidence=IEA] InterPro:IPR003107 InterPro:IPR011990
InterPro:IPR013026 Pfam:PF02184 SMART:SM00386 GO:GO:0008380
EMBL:BN001308 GO:GO:0006397 GO:GO:0005681 EMBL:AACD01000017
GO:GO:0007049 Gene3D:1.25.40.10 eggNOG:NOG327505 KO:K12869
RefSeq:XP_658863.1 STRING:Q5BDX1 GeneID:2877035 KEGG:ani:AN1259.2
HOGENOM:HOG000207972 OMA:KFTFAKI OrthoDB:EOG4NKG44 Uniprot:Q5BDX1
Length = 673
Score = 198 (74.8 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 77/310 (24%), Positives = 138/310 (44%)
Query: 50 QCWAVLENKLGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKF 109
Q +A LE G+ R+ F+ ++ ++ W +A EL Q ++AR + + L
Sbjct: 42 QRFADLEELHEYQGRKRKEFEDYVRRNRINMNNWMRYAAWELEQKEFRRARSIFERALDV 101
Query: 110 CGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQ 169
+ ++ E + ARNL +A P+ W + ME N RQ
Sbjct: 102 DSTSVPLWIRYIESEMRNRNINHARNLLDRAVTILPRVDKLWYKYVYMEETLGNIPGTRQ 161
Query: 170 LFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKY 229
+FER + P + AW + E ++ + + + V+P +P A E +Y
Sbjct: 162 VFERWMSWEP-DEGAWSAYIKLEKRYNEFERARAIFQRFTIVHP-EPRNWIKWARFEEEY 219
Query: 230 STANLARKLFRRASEI---DPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESA 286
T++L R+++ A E D + ++IA+ E K + AR +Y+ AL D S
Sbjct: 220 GTSDLVREVYGLAVETLGEDFMDEKLFIAYARFETKLKEYERARAIYKYAL--DRLPRSK 277
Query: 287 ARCL-QAWGVLEQRVGN-------LSAARRL-FRSSLNINSQSYITWMTWAQLEEDQGNS 337
+ L +A+ E++ G+ + A RR+ + L N ++Y W +A+LEE G+
Sbjct: 278 SITLHKAYTTFEKQFGDREGVENVILAKRRVQYEEQLKENLRNYDVWFDFARLEEQSGDP 337
Query: 338 VRAEEIRNLY 347
E +R++Y
Sbjct: 338 ---ERVRDVY 344
Score = 174 (66.3 bits), Expect = 8.5e-10, P = 8.5e-10
Identities = 73/339 (21%), Positives = 146/339 (43%)
Query: 23 KQSKVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARELFD-ASTVADKGHIA 81
+Q + AR+I+ + P +W + E + NI AR L D A T+ +
Sbjct: 84 EQKEFRRARSIFERALDVDSTSVP-LWIRYIESEMRNRNINHARNLLDRAVTILPRVD-K 141
Query: 82 AWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQAT 141
W+ + +E GNI RQ+ + + + +E + LE + N +E+AR +F++ T
Sbjct: 142 LWYKYVYMEETLGNIPGTRQVFERWMSW-EPDEGAWSAYIKLEKRYNEFERARAIFQRFT 200
Query: 142 KCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRF---AWHVWGIFEANMGFI 198
+P+ +WI W++ E + + R+++ AV+ ++ + + FE +
Sbjct: 201 IVHPEP-RNWIKWARFEEEYGTSDLVREVYGLAVETLGEDFMDEKLFIAYARFETKLKEY 259
Query: 199 DKGKKLLKIGHAVNPRDP--VLLQSLALLEYKYSTAN------LARKLFRRASEIDP--R 248
++ + + K PR L ++ E ++ LA++ + ++ R
Sbjct: 260 ERARAIYKYALDRLPRSKSITLHKAYTTFEKQFGDREGVENVILAKRRVQYEEQLKENLR 319
Query: 249 HQPVWIAWGWMEWKEGNLDTARELYERALS-IDSTTESA--ARCLQAWGVL----EQRVG 301
+ VW + +E + G+ + R++YERA++ I + E R + W E
Sbjct: 320 NYDVWFDFARLEEQSGDPERVRDVYERAIAQIPPSQEKRHWRRYIYLWIFYALWEEMEAK 379
Query: 302 NLSAARRLFRSSLNINSQSYIT----WMTWAQLEEDQGN 336
++ AR+++ L + T W+ AQ E Q N
Sbjct: 380 DIDRARQVYTECLKLIPHKKFTFAKVWLMKAQFEVRQLN 418
Score = 146 (56.5 bits), Expect = 9.9e-07, P = 9.9e-07
Identities = 60/278 (21%), Positives = 110/278 (39%)
Query: 49 WQCWAVLENKLGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLK 108
W +A E + +AR +F+ + D + W + E+R NI AR LL + +
Sbjct: 75 WMRYAAWELEQKEFRRARSIFERALDVDSTSVPLWIRYIESEMRNRNINHARNLLDRAVT 134
Query: 109 FCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAAR 168
+ ++ +E R +F + P A W A+ ++E + AR
Sbjct: 135 ILPRVDKLWYKYVYMEETLGNIPGTRQVFERWMSWEPDEGA-WSAYIKLEKRYNEFERAR 193
Query: 169 QLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNP-----RDPVLLQSLA 223
+F+R P+ R W W FE G D +++ G AV D L + A
Sbjct: 194 AIFQRFTIVHPEPR-NWIKWARFEEEYGTSDLVREVY--GLAVETLGEDFMDEKLFIAYA 250
Query: 224 LLEYKYSTANLARKLFRRASEIDPRHQPVWI--AWGWMEWKEGNLDTARE--LYERALSI 279
E K AR +++ A + PR + + + A+ E + G+ + L +R +
Sbjct: 251 RFETKLKEYERARAIYKYALDRLPRSKSITLHKAYTTFEKQFGDREGVENVILAKRRVQY 310
Query: 280 DSTTESAARCLQAW---GVLEQRVGNLSAARRLFRSSL 314
+ + R W LE++ G+ R ++ ++
Sbjct: 311 EEQLKENLRNYDVWFDFARLEEQSGDPERVRDVYERAI 348
Score = 129 (50.5 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 37/165 (22%), Positives = 81/165 (49%)
Query: 47 YIWQCWAVLEN-KLGNIGKARELFDA--STVADKGHIAA--WHGWAVLELRQGNIKKARQ 101
Y+W +A+ E + +I +AR+++ + K A W A E+RQ N++ AR+
Sbjct: 365 YLWIFYALWEEMEAKDIDRARQVYTECLKLIPHKKFTFAKVWLMKAQFEVRQLNLQAARK 424
Query: 102 LLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQ 161
L + + C ++ +++ LE + + + R L+ + + NP + SWI ++++E
Sbjct: 425 TLGQAIGMCPKDK-LFRGYIDLERQLFEFVRCRTLYEKQIEWNPSNSQSWIQYAELERGL 483
Query: 162 ENNLAARQLFERAVQASPKN--RFAWHVWGIFEANMGFIDKGKKL 204
++ AR ++E + + W + FE + G ++ ++L
Sbjct: 484 DDTERARAIYELGIDQPTLDMPELVWKAYIDFEDDEGEYERERQL 528
>FB|FBgn0000377 [details] [associations]
symbol:crn "crooked neck" species:7227 "Drosophila
melanogaster" [GO:0007443 "Malpighian tubule morphogenesis"
evidence=IMP] [GO:0007417 "central nervous system development"
evidence=NAS] [GO:0005634 "nucleus" evidence=IC;NAS] [GO:0007422
"peripheral nervous system development" evidence=NAS] [GO:0048663
"neuron fate commitment" evidence=NAS] [GO:0007405 "neuroblast
proliferation" evidence=NAS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0016607 "nuclear speck" evidence=IDA]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=IMP] [GO:0007438 "oenocyte development"
evidence=IMP] [GO:0008347 "glial cell migration" evidence=IMP]
[GO:0008366 "axon ensheathment" evidence=IMP] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0071011
"precatalytic spliceosome" evidence=IDA] [GO:0051298 "centrosome
duplication" evidence=IMP] [GO:0005813 "centrosome" evidence=IDA]
[GO:0072686 "mitotic spindle" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR003107 InterPro:IPR011990
InterPro:IPR013026 Pfam:PF02184 SMART:SM00386 GO:GO:0005813
GO:GO:0051298 GO:GO:0016607 EMBL:AE014298 GO:GO:0007438
Gene3D:1.25.40.10 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013
GO:GO:0008347 GO:GO:0072686 GO:GO:0007443 GO:GO:0000381
GO:GO:0008366 eggNOG:NOG327505 KO:K12869 OMA:KFTFAKI
GeneTree:ENSGT00550000074931 EMBL:X58374 EMBL:AL009195
EMBL:AY051666 PIR:T13427 RefSeq:NP_477118.1 UniGene:Dm.3140
ProteinModelPortal:P17886 SMR:P17886 DIP:DIP-17429N IntAct:P17886
MINT:MINT-282072 STRING:P17886 PaxDb:P17886
EnsemblMetazoa:FBtr0070418 GeneID:31208 KEGG:dme:Dmel_CG3193
CTD:12935 FlyBase:FBgn0000377 HOGENOM:HOG000264173
InParanoid:P17886 OrthoDB:EOG4J9KDW PhylomeDB:P17886
GenomeRNAi:31208 NextBio:772455 Bgee:P17886 GermOnline:CG3193
Uniprot:P17886
Length = 702
Score = 196 (74.1 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 71/295 (24%), Positives = 135/295 (45%)
Query: 64 KARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALL 123
+ R+ F+ + ++ ++ W +A E +Q I++AR + + L N ++ A +
Sbjct: 60 RKRKTFEDNLRKNRMVVSHWIKYAQWEEQQQEIQRARSIWERALDNEHRNVTLWLKYAEM 119
Query: 124 EAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRF 183
E K + ARNL+ +A P+ W ++ ME EN ARQ+FER ++ P+ +
Sbjct: 120 EMKNKQVNHARNLWDRAVTIMPRVNQFWYKYTYMEEMLENVAGARQVFERWMEWQPEEQ- 178
Query: 184 AWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRAS 243
AW + FE ID+ +++ + V+P D A E + + +R++F RA
Sbjct: 179 AWQTYVNFELRYKEIDRAREIYERFVYVHP-DVKNWIKFARFEESHGFIHGSRRVFERAV 237
Query: 244 EI---DPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQRV 300
E D + ++IA+ E + D AR +Y+ AL + +A+ E++
Sbjct: 238 EFFGDDYIEERLFIAFARFEEGQKEHDRARIIYKYALD-HLPKDRTQELFKAYTKHEKKY 296
Query: 301 GN--------LSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEIRNLY 347
G+ +S + + + N +Y W + +L E +G+ ++IR Y
Sbjct: 297 GDRAGIEDVIVSKRKYQYEQEVAANPTNYDAWFDYLRLIEAEGDR---DQIRETY 348
Score = 167 (63.8 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 61/270 (22%), Positives = 123/270 (45%)
Query: 23 KQSKVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARELFD-ASTVADKGHIA 81
+Q ++ AR+I+ + + N +W +A +E K + AR L+D A T+ + +
Sbjct: 88 QQQEIQRARSIWERALD-NEHRNVTLWLKYAEMEMKNKQVNHARNLWDRAVTIMPRVN-Q 145
Query: 82 AWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQAT 141
W+ + +E N+ ARQ+ + +++ E +QT E + ++AR ++ +
Sbjct: 146 FWYKYTYMEEMLENVAGARQVFERWMEW-QPEEQAWQTYVNFELRYKEIDRAREIYERFV 204
Query: 142 KCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVW---GIFEANMGFI 198
+P +WI +++ E +R++FERAV+ + ++ FE
Sbjct: 205 YVHP-DVKNWIKFARFEESHGFIHGSRRVFERAVEFFGDDYIEERLFIAFARFEEGQKEH 263
Query: 199 DKGKKLLK--IGHAVNPRDPVLLQSLALLEYKYST-ANL-----ARKLFRRASEI--DPR 248
D+ + + K + H R L ++ E KY A + +++ ++ E+ +P
Sbjct: 264 DRARIIYKYALDHLPKDRTQELFKAYTKHEKKYGDRAGIEDVIVSKRKYQYEQEVAANPT 323
Query: 249 HQPVWIAWGWMEWKEGNLDTARELYERALS 278
+ W + + EG+ D RE YERA+S
Sbjct: 324 NYDAWFDYLRLIEAEGDRDQIRETYERAIS 353
Score = 158 (60.7 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 53/218 (24%), Positives = 91/218 (41%)
Query: 130 YEQA-RNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVW 188
Y+Q R F + N + WI ++Q E QQ+ AR ++ERA+ +N W +
Sbjct: 57 YQQRKRKTFEDNLRKNRMVVSHWIKYAQWEEQQQEIQRARSIWERALDNEHRNVTLWLKY 116
Query: 189 GIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDPR 248
E ++ + L + PR +E AR++F R E P
Sbjct: 117 AEMEMKNKQVNHARNLWDRAVTIMPRVNQFWYKYTYMEEMLENVAGARQVFERWMEWQPE 176
Query: 249 HQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQRVGNLSAARR 308
Q W + E + +D ARE+YER + + ++ + + E+ G + +RR
Sbjct: 177 EQ-AWQTYVNFELRYKEIDRAREIYERFVYVHPDVKNWIKFAR----FEESHGFIHGSRR 231
Query: 309 LFRSSLNINSQSYIT---WMTWAQLEEDQGNSVRAEEI 343
+F ++ YI ++ +A+ EE Q RA I
Sbjct: 232 VFERAVEFFGDDYIEERLFIAFARFEEGQKEHDRARII 269
Score = 145 (56.1 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 53/229 (23%), Positives = 101/229 (44%)
Query: 117 YQTLALLEAKANRYEQARNLFRQATK----CNPKS-----CASWIAWSQME-MQQENNLA 166
+ L L+EA+ +R +Q R + +A N K+ WI ++ E ++ E+
Sbjct: 329 FDYLRLIEAEGDR-DQIRETYERAISNVPPANEKNFWRRYIYLWINYALYEELEAEDAER 387
Query: 167 ARQLFERAVQASPKNRFA----WHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSL 222
RQ+++ ++ P +F W ++ FE + + +K L + + PRD L +
Sbjct: 388 TRQIYKTCLELIPHKQFTFSKLWLLYAQFEIRCKELQRARKALGLAIGMCPRDK-LFRGY 446
Query: 223 ALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDST 282
LE + R L+ + E P + W+ + +E G+ D AR ++E A+
Sbjct: 447 IDLEIQLREFERCRMLYEKFLEFGPENCVTWMKFAELENLLGDTDRARAIFELAVQ-QPR 505
Query: 283 TESAARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLE 331
+ +A+ E +G AR+L+ L +Q WM++A+ E
Sbjct: 506 LDMPELLWKAYIDFEVALGETELARQLYERLLE-RTQHVKVWMSFAKFE 553
Score = 133 (51.9 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 59/241 (24%), Positives = 101/241 (41%)
Query: 79 HIAAWHGWAVLE-LRQGNIKKARQLLAKGLKFCGGNEYIYQTLALL----EAKANRYEQA 133
+I W +A+ E L + ++ RQ+ L+ ++ + L LL E + ++A
Sbjct: 367 YIYLWINYALYEELEAEDAERTRQIYKTCLELIPHKQFTFSKLWLLYAQFEIRCKELQRA 426
Query: 134 RNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVWGIFEA 193
R A P+ + + +E+Q R L+E+ ++ P+N W + E
Sbjct: 427 RKALGLAIGMCPRD-KLFRGYIDLEIQLREFERCRMLYEKFLEFGPENCVTWMKFAELEN 485
Query: 194 NMGFIDKGKKLLKIGHAVNPR-D-PVLLQSLAL-LEYKYSTANLARKLFRRASEIDPRHQ 250
+G D+ + + ++ PR D P LL + E LAR+L+ R E +H
Sbjct: 486 LLGDTDRARAIFELA-VQQPRLDMPELLWKAYIDFEVALGETELARQLYERLLE-RTQHV 543
Query: 251 PVWIAWGWMEW----------KEGNLDTARELYERA---LSIDSTTESAARCLQAWGVLE 297
VW+++ E E N+ AR +YERA L ES L+AW E
Sbjct: 544 KVWMSFAKFEMGLSHGDSGPDAELNVQLARRIYERANEMLRQLGDKESRVLLLEAWRDFE 603
Query: 298 Q 298
+
Sbjct: 604 R 604
Score = 124 (48.7 bits), Expect = 0.00026, P = 0.00026
Identities = 36/166 (21%), Positives = 81/166 (48%)
Query: 47 YIWQCWAVLEN-KLGNIGKARELFDA--STVADKGHIAA--WHGWAVLELRQGNIKKARQ 101
Y+W +A+ E + + + R+++ + K + W +A E+R +++AR+
Sbjct: 369 YLWINYALYEELEAEDAERTRQIYKTCLELIPHKQFTFSKLWLLYAQFEIRCKELQRARK 428
Query: 102 LLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQ 161
L + C ++ +++ LE + +E+ R L+ + + P++C +W+ ++++E
Sbjct: 429 ALGLAIGMCPRDK-LFRGYIDLEIQLREFERCRMLYEKFLEFGPENCVTWMKFAELENLL 487
Query: 162 ENNLAARQLFERAVQASPK---NRFAWHVWGIFEANMGFIDKGKKL 204
+ AR +FE AVQ P+ W + FE +G + ++L
Sbjct: 488 GDTDRARAIFELAVQ-QPRLDMPELLWKAYIDFEVALGETELARQL 532
Score = 118 (46.6 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 34/159 (21%), Positives = 73/159 (45%)
Query: 49 WQCWAVLENKLGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLK 108
W +A E + I +AR +++ + + ++ W +A +E++ + AR L + +
Sbjct: 79 WIKYAQWEEQQQEIQRARSIWERALDNEHRNVTLWLKYAEMEMKNKQVNHARNLWDRAVT 138
Query: 109 FCGG-NEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAA 167
N++ Y+ +E AR +F + + P+ A W + E++ + A
Sbjct: 139 IMPRVNQFWYK-YTYMEEMLENVAGARQVFERWMEWQPEEQA-WQTYVNFELRYKEIDRA 196
Query: 168 RQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLK 206
R+++ER V P + W + FE + GFI +++ +
Sbjct: 197 REIYERFVYVHPDVK-NWIKFARFEESHGFIHGSRRVFE 234
Score = 92 (37.4 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 32/139 (23%), Positives = 59/139 (42%)
Query: 226 EYKYSTANLARKLFRRASEIDPRHQ----PVWIAWGWMEWKEGNLDTARELYERALSIDS 281
E + A R++++ E+ P Q +W+ + E + L AR+ L+I
Sbjct: 379 ELEAEDAERTRQIYKTCLELIPHKQFTFSKLWLLYAQFEIRCKELQRARKAL--GLAIGM 436
Query: 282 TTESAARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAE 341
+ + + LE ++ R L+ L ++ +TWM +A+LE G++ RA
Sbjct: 437 CPRD--KLFRGYIDLEIQLREFERCRMLYEKFLEFGPENCVTWMKFAELENLLGDTDRAR 494
Query: 342 EIRNLYFQQRTEVVDDASW 360
I L QQ + + W
Sbjct: 495 AIFELAVQQPRLDMPELLW 513
>MGI|MGI:1914127 [details] [associations]
symbol:Crnkl1 "Crn, crooked neck-like 1 (Drosophila)"
species:10090 "Mus musculus" [GO:0000245 "spliceosomal complex
assembly" evidence=ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003723 "RNA binding" evidence=ISO]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=ISO]
[GO:0006396 "RNA processing" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=ISO]
InterPro:IPR003107 InterPro:IPR011990 InterPro:IPR013026
Pfam:PF02184 SMART:SM00386 MGI:MGI:1914127 GO:GO:0016607
GO:GO:0005681 GO:GO:0003723 Gene3D:1.25.40.10 GO:GO:0000245
eggNOG:NOG327505 KO:K12869 HOGENOM:HOG000207972 OMA:KFTFAKI
GeneTree:ENSGT00550000074931 CTD:51340 HOVERGEN:HBG051046
EMBL:AK004749 EMBL:AK012962 EMBL:AK088882 EMBL:BC029187
IPI:IPI00132376 RefSeq:NP_080096.1 UniGene:Mm.248755
ProteinModelPortal:P63154 SMR:P63154 STRING:P63154
PhosphoSite:P63154 PaxDb:P63154 PRIDE:P63154
Ensembl:ENSMUST00000001818 GeneID:66877 KEGG:mmu:66877
InParanoid:P63154 OrthoDB:EOG4SJ5DC ChiTaRS:CRNKL1 NextBio:322905
Bgee:P63154 CleanEx:MM_CRNKL1 Genevestigator:P63154
GermOnline:ENSMUSG00000001767 Uniprot:P63154
Length = 690
Score = 194 (73.4 bits), Expect = 5.6e-12, P = 5.6e-12
Identities = 68/295 (23%), Positives = 136/295 (46%)
Query: 64 KARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALL 123
+ R+ F+ + ++ I+ W +A E I++AR + + L N ++ A +
Sbjct: 65 RKRKTFEDNIRKNRTVISNWIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEM 124
Query: 124 EAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRF 183
E K + ARN++ +A P+ W ++ ME N ARQ+FER ++ P+ +
Sbjct: 125 EMKNRQVNHARNIWDRAITTLPRVNQFWYKYTYMEEMLGNVAGARQVFERWMEWQPEEQ- 183
Query: 184 AWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRAS 243
AWH + FE +++ + + + V+P ++ A E K++ ARK++ RA
Sbjct: 184 AWHSYINFELRYKEVERARTIYERFVLVHPAVKNWIK-YARFEEKHAYFAHARKVYERAV 242
Query: 244 EI-DPRH--QPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQRV 300
E H + +++A+ E + + R +Y+ AL S E A + + + E++
Sbjct: 243 EFFGDEHMDEHLYVAFAKFEENQKEFERVRVIYKYALDRISKQE-AQELFKNYTIFEKKF 301
Query: 301 GN------LSAARRLFR--SSLNINSQSYITWMTWAQLEEDQGNSVRAEEIRNLY 347
G+ + ++R F+ + N +Y W + +L E + A+ +R +Y
Sbjct: 302 GDRRGIEDIIVSKRRFQYEEEVKANPHNYDAWFDYLRLVE---SDAEADTVREVY 353
Score = 170 (64.9 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 56/267 (20%), Positives = 123/267 (46%)
Query: 26 KVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARELFD-ASTVADKGHIAAWH 84
++ AR+IY + N +W +A +E K + AR ++D A T + + W+
Sbjct: 96 EIQRARSIYERALDVDY-RNITLWLKYAEMEMKNRQVNHARNIWDRAITTLPRVN-QFWY 153
Query: 85 GWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCN 144
+ +E GN+ ARQ+ + +++ E + + E + E+AR ++ + +
Sbjct: 154 KYTYMEEMLGNVAGARQVFERWMEW-QPEEQAWHSYINFELRYKEVERARTIYERFVLVH 212
Query: 145 PKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVW---GIFEANMGFIDKG 201
P + +WI +++ E + AR+++ERAV+ H++ FE N ++
Sbjct: 213 P-AVKNWIKYARFEEKHAYFAHARKVYERAVEFFGDEHMDEHLYVAFAKFEENQKEFERV 271
Query: 202 KKLLKIG-HAVNPRDPV-LLQSLALLEYKYSTAN------LARKLFRRASEI--DPRHQP 251
+ + K ++ ++ L ++ + E K+ ++++ F+ E+ +P +
Sbjct: 272 RVIYKYALDRISKQEAQELFKNYTIFEKKFGDRRGIEDIIVSKRRFQYEEEVKANPHNYD 331
Query: 252 VWIAWGWMEWKEGNLDTARELYERALS 278
W + + + DT RE+YERA++
Sbjct: 332 AWFDYLRLVESDAEADTVREVYERAIA 358
Score = 148 (57.2 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 60/248 (24%), Positives = 114/248 (45%)
Query: 77 KGHIAAWHGWAVLE-LRQGNIKKARQLLAKGLKFCGGNEYIYQTL----ALLEAKANRYE 131
K +I W +A+ E L + ++ RQ+ L+ ++ + + A E +
Sbjct: 370 KRYIYLWVNYALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWLYYAQFEIRQKNLP 429
Query: 132 QARN-LFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVWGI 190
AR L KC PK+ + + ++E+Q R+L+E+ ++ P+N +W +
Sbjct: 430 FARRALGTSIGKC-PKN-KLFKGYIELELQLREFDRCRKLYEKFLEFGPENCTSWIKFAE 487
Query: 191 FEANMGFIDKGKKLLKIGHAVNPR-D-P-VLLQSLALLEYKYSTANLARKLFRRASEIDP 247
E +G I++ + + ++ + PR D P VL +S E + R L+R+ +
Sbjct: 488 LETILGDIERARAIYELAIS-QPRLDMPEVLWKSYIDFEIEQEETERTRNLYRQLLQ-RT 545
Query: 248 RHQPVWIAWGWMEW---KEGNLDTARELYERA-LSIDSTTESAARC--LQAWGVLEQRVG 301
+H VWI++ E KEG++ R++YE A ++ + E R L++W E G
Sbjct: 546 QHVKVWISFAQFELSSGKEGSVAKCRQIYEEANKTMRNCEEKEERLMLLESWRSFEDEFG 605
Query: 302 NLSAARRL 309
+S R+
Sbjct: 606 TVSDKERV 613
Score = 132 (51.5 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 35/139 (25%), Positives = 73/139 (52%)
Query: 47 YIWQCWAVLEN-KLGNIGKARELFDAST--VADKGHIAA--WHGWAVLELRQGNIKKARQ 101
Y+W +A+ E + + + R+++ AS + K A W +A E+RQ N+ AR+
Sbjct: 374 YLWVNYALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWLYYAQFEIRQKNLPFARR 433
Query: 102 LLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQ 161
L + C N+ +++ LE + +++ R L+ + + P++C SWI ++++E
Sbjct: 434 ALGTSIGKCPKNK-LFKGYIELELQLREFDRCRKLYEKFLEFGPENCTSWIKFAELETIL 492
Query: 162 ENNLAARQLFERAVQASPK 180
+ AR ++E A+ + P+
Sbjct: 493 GDIERARAIYELAI-SQPR 510
Score = 127 (49.8 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 42/202 (20%), Positives = 86/202 (42%)
Query: 151 WIAWSQME-MQQENNLAARQLFERAVQASPKNRFA----WHVWGIFEANMGFIDKGKKLL 205
W+ ++ E ++ ++ RQ+++ +++ P +F W + FE + ++ L
Sbjct: 376 WVNYALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWLYYAQFEIRQKNLPFARRAL 435
Query: 206 KIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGN 265
P++ L + LE + + RKL+ + E P + WI + +E G+
Sbjct: 436 GTSIGKCPKNK-LFKGYIELELQLREFDRCRKLYEKFLEFGPENCTSWIKFAELETILGD 494
Query: 266 LDTARELYERALSIDSTTESAARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWM 325
++ AR +YE A+S + +++ E R L+R L +Q W+
Sbjct: 495 IERARAIYELAIS-QPRLDMPEVLWKSYIDFEIEQEETERTRNLYRQLLQ-RTQHVKVWI 552
Query: 326 TWAQLEEDQGNSVRAEEIRNLY 347
++AQ E G + R +Y
Sbjct: 553 SFAQFELSSGKEGSVAKCRQIY 574
Score = 115 (45.5 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 35/157 (22%), Positives = 70/157 (44%)
Query: 49 WQCWAVLENKLGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLK 108
W +A E L I +AR +++ + D +I W +A +E++ + AR + + +
Sbjct: 84 WIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEMEMKNRQVNHARNIWDRAIT 143
Query: 109 FCGG-NEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAA 167
N++ Y+ + E N AR +F + + P+ A W ++ E++ + A
Sbjct: 144 TLPRVNQFWYKYTYMEEMLGN-VAGARQVFERWMEWQPEEQA-WHSYINFELRYKEVERA 201
Query: 168 RQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKL 204
R ++ER V P + W + FE + +K+
Sbjct: 202 RTIYERFVLVHPAVK-NWIKYARFEEKHAYFAHARKV 237
Score = 84 (34.6 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 38/186 (20%), Positives = 79/186 (42%)
Query: 236 RKLFRRASEIDPRHQ----PVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQ 291
R++++ + E+ P + +W+ + E ++ NL AR RAL + +
Sbjct: 394 RQVYQASLELIPHKKFTFAKMWLYYAQFEIRQKNLPFAR----RALGTSIGKCPKNKLFK 449
Query: 292 AWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEIRNLYFQQR 351
+ LE ++ R+L+ L ++ +W+ +A+LE G+ RA I L Q
Sbjct: 450 GYIELELQLREFDRCRKLYEKFLEFGPENCTSWIKFAELETILGDIERARAIYELAISQP 509
Query: 352 TEVVDDASWVMGFMD--IIDPALDRIKQLLN--LEKSSYKEPSAYSPGDNESTDDEASVS 407
+ + W ++D I +R + L L+++ + + S+ E SV+
Sbjct: 510 RLDMPEVLW-KSYIDFEIEQEETERTRNLYRQLLQRTQHVKVWISFAQFELSSGKEGSVA 568
Query: 408 RYSGLY 413
+ +Y
Sbjct: 569 KCRQIY 574
Score = 50 (22.7 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 20/107 (18%), Positives = 40/107 (37%)
Query: 10 DGRPYVALGKVLSKQSKVAEARAIYAKG-SQATQGENPYIWQCWAVLENKLGN------- 61
D YVA K Q + R IY + ++ E +++ + + E K G+
Sbjct: 251 DEHLYVAFAKFEENQKEFERVRVIYKYALDRISKQEAQELFKNYTIFEKKFGDRRGIEDI 310
Query: 62 -IGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGL 107
+ K R ++ A+ + AW + L R++ + +
Sbjct: 311 IVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDAEADTVREVYERAI 357
>RGD|620507 [details] [associations]
symbol:Crnkl1 "crooked neck pre-mRNA splicing factor-like 1
(Drosophila)" species:10116 "Rattus norvegicus" [GO:0000245
"spliceosomal complex assembly" evidence=ISO;ISS] [GO:0003723 "RNA
binding" evidence=ISO;ISS] [GO:0005681 "spliceosomal complex"
evidence=ISO;ISS] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR003107 InterPro:IPR011990
InterPro:IPR013026 Pfam:PF02184 SMART:SM00386 RGD:620507
GO:GO:0005681 GO:GO:0003723 Gene3D:1.25.40.10 GO:GO:0071013
GO:GO:0000245 eggNOG:NOG327505 KO:K12869 HOGENOM:HOG000207972
GeneTree:ENSGT00550000074931 CTD:51340 HOVERGEN:HBG051046
OrthoDB:EOG4SJ5DC EMBL:AF245018 EMBL:BC085718 IPI:IPI00327482
RefSeq:NP_446249.1 RefSeq:XP_003749628.1 UniGene:Rn.162694
ProteinModelPortal:P63155 SMR:P63155 STRING:P63155 PRIDE:P63155
Ensembl:ENSRNOT00000014632 GeneID:100910202 GeneID:116481
KEGG:rno:100910202 KEGG:rno:116481 UCSC:RGD:620507
InParanoid:P63155 NextBio:619051 Genevestigator:P63155
GermOnline:ENSRNOG00000040045 Uniprot:P63155
Length = 690
Score = 194 (73.4 bits), Expect = 5.6e-12, P = 5.6e-12
Identities = 68/295 (23%), Positives = 136/295 (46%)
Query: 64 KARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALL 123
+ R+ F+ + ++ I+ W +A E I++AR + + L N ++ A +
Sbjct: 65 RKRKTFEDNIRKNRTVISNWIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEM 124
Query: 124 EAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRF 183
E K + ARN++ +A P+ W ++ ME N ARQ+FER ++ P+ +
Sbjct: 125 EMKNRQVNHARNIWDRAITTLPRVNQFWYKYTYMEEMLGNVAGARQVFERWMEWQPEEQ- 183
Query: 184 AWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRAS 243
AWH + FE +++ + + + V+P ++ A E K++ ARK++ RA
Sbjct: 184 AWHSYINFELRYKEVERARTIYERFVLVHPAVKNWIK-YARFEEKHAYFAHARKVYERAV 242
Query: 244 EI-DPRH--QPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQRV 300
E H + +++A+ E + + R +Y+ AL S E A + + + E++
Sbjct: 243 EFFGDEHMDEHLYVAFAKFEENQKEFERVRVIYKYALDRISKQE-AQELFKNYTIFEKKF 301
Query: 301 GN------LSAARRLFR--SSLNINSQSYITWMTWAQLEEDQGNSVRAEEIRNLY 347
G+ + ++R F+ + N +Y W + +L E + A+ +R +Y
Sbjct: 302 GDRRGIEDIIVSKRRFQYEEEVKANPHNYDAWFDYLRLVE---SDAEADTVREVY 353
Score = 170 (64.9 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 56/267 (20%), Positives = 123/267 (46%)
Query: 26 KVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARELFD-ASTVADKGHIAAWH 84
++ AR+IY + N +W +A +E K + AR ++D A T + + W+
Sbjct: 96 EIQRARSIYERALDVDY-RNITLWLKYAEMEMKNRQVNHARNIWDRAITTLPRVN-QFWY 153
Query: 85 GWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCN 144
+ +E GN+ ARQ+ + +++ E + + E + E+AR ++ + +
Sbjct: 154 KYTYMEEMLGNVAGARQVFERWMEW-QPEEQAWHSYINFELRYKEVERARTIYERFVLVH 212
Query: 145 PKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVW---GIFEANMGFIDKG 201
P + +WI +++ E + AR+++ERAV+ H++ FE N ++
Sbjct: 213 P-AVKNWIKYARFEEKHAYFAHARKVYERAVEFFGDEHMDEHLYVAFAKFEENQKEFERV 271
Query: 202 KKLLKIG-HAVNPRDPV-LLQSLALLEYKYSTAN------LARKLFRRASEI--DPRHQP 251
+ + K ++ ++ L ++ + E K+ ++++ F+ E+ +P +
Sbjct: 272 RVIYKYALDRISKQEAQELFKNYTIFEKKFGDRRGIEDIIVSKRRFQYEEEVKANPHNYD 331
Query: 252 VWIAWGWMEWKEGNLDTARELYERALS 278
W + + + DT RE+YERA++
Sbjct: 332 AWFDYLRLVESDAEADTVREVYERAIA 358
Score = 148 (57.2 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 60/248 (24%), Positives = 114/248 (45%)
Query: 77 KGHIAAWHGWAVLE-LRQGNIKKARQLLAKGLKFCGGNEYIYQTL----ALLEAKANRYE 131
K +I W +A+ E L + ++ RQ+ L+ ++ + + A E +
Sbjct: 370 KRYIYLWVNYALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWLYYAQFEIRQKNLP 429
Query: 132 QARN-LFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVWGI 190
AR L KC PK+ + + ++E+Q R+L+E+ ++ P+N +W +
Sbjct: 430 FARRALGTSIGKC-PKN-KLFKGYIELELQLREFDRCRKLYEKFLEFGPENCTSWIKFAE 487
Query: 191 FEANMGFIDKGKKLLKIGHAVNPR-D-P-VLLQSLALLEYKYSTANLARKLFRRASEIDP 247
E +G I++ + + ++ + PR D P VL +S E + R L+R+ +
Sbjct: 488 LETILGDIERARAIYELAIS-QPRLDMPEVLWKSYIDFEIEQEETERTRNLYRQLLQ-RT 545
Query: 248 RHQPVWIAWGWMEW---KEGNLDTARELYERA-LSIDSTTESAARC--LQAWGVLEQRVG 301
+H VWI++ E KEG++ R++YE A ++ + E R L++W E G
Sbjct: 546 QHVKVWISFAQFELSSGKEGSVAKCRQIYEEANKTMRNCEEKEERLMLLESWRSFEDEFG 605
Query: 302 NLSAARRL 309
+S R+
Sbjct: 606 TVSDKERV 613
Score = 132 (51.5 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 35/139 (25%), Positives = 73/139 (52%)
Query: 47 YIWQCWAVLEN-KLGNIGKARELFDAST--VADKGHIAA--WHGWAVLELRQGNIKKARQ 101
Y+W +A+ E + + + R+++ AS + K A W +A E+RQ N+ AR+
Sbjct: 374 YLWVNYALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWLYYAQFEIRQKNLPFARR 433
Query: 102 LLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQ 161
L + C N+ +++ LE + +++ R L+ + + P++C SWI ++++E
Sbjct: 434 ALGTSIGKCPKNK-LFKGYIELELQLREFDRCRKLYEKFLEFGPENCTSWIKFAELETIL 492
Query: 162 ENNLAARQLFERAVQASPK 180
+ AR ++E A+ + P+
Sbjct: 493 GDIERARAIYELAI-SQPR 510
Score = 127 (49.8 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 42/202 (20%), Positives = 86/202 (42%)
Query: 151 WIAWSQME-MQQENNLAARQLFERAVQASPKNRFA----WHVWGIFEANMGFIDKGKKLL 205
W+ ++ E ++ ++ RQ+++ +++ P +F W + FE + ++ L
Sbjct: 376 WVNYALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWLYYAQFEIRQKNLPFARRAL 435
Query: 206 KIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGN 265
P++ L + LE + + RKL+ + E P + WI + +E G+
Sbjct: 436 GTSIGKCPKNK-LFKGYIELELQLREFDRCRKLYEKFLEFGPENCTSWIKFAELETILGD 494
Query: 266 LDTARELYERALSIDSTTESAARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWM 325
++ AR +YE A+S + +++ E R L+R L +Q W+
Sbjct: 495 IERARAIYELAIS-QPRLDMPEVLWKSYIDFEIEQEETERTRNLYRQLLQ-RTQHVKVWI 552
Query: 326 TWAQLEEDQGNSVRAEEIRNLY 347
++AQ E G + R +Y
Sbjct: 553 SFAQFELSSGKEGSVAKCRQIY 574
Score = 115 (45.5 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 35/157 (22%), Positives = 70/157 (44%)
Query: 49 WQCWAVLENKLGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLK 108
W +A E L I +AR +++ + D +I W +A +E++ + AR + + +
Sbjct: 84 WIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEMEMKNRQVNHARNIWDRAIT 143
Query: 109 FCGG-NEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAA 167
N++ Y+ + E N AR +F + + P+ A W ++ E++ + A
Sbjct: 144 TLPRVNQFWYKYTYMEEMLGN-VAGARQVFERWMEWQPEEQA-WHSYINFELRYKEVERA 201
Query: 168 RQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKL 204
R ++ER V P + W + FE + +K+
Sbjct: 202 RTIYERFVLVHPAVK-NWIKYARFEEKHAYFAHARKV 237
Score = 84 (34.6 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 38/186 (20%), Positives = 79/186 (42%)
Query: 236 RKLFRRASEIDPRHQ----PVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQ 291
R++++ + E+ P + +W+ + E ++ NL AR RAL + +
Sbjct: 394 RQVYQASLELIPHKKFTFAKMWLYYAQFEIRQKNLPFAR----RALGTSIGKCPKNKLFK 449
Query: 292 AWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEIRNLYFQQR 351
+ LE ++ R+L+ L ++ +W+ +A+LE G+ RA I L Q
Sbjct: 450 GYIELELQLREFDRCRKLYEKFLEFGPENCTSWIKFAELETILGDIERARAIYELAISQP 509
Query: 352 TEVVDDASWVMGFMD--IIDPALDRIKQLLN--LEKSSYKEPSAYSPGDNESTDDEASVS 407
+ + W ++D I +R + L L+++ + + S+ E SV+
Sbjct: 510 RLDMPEVLW-KSYIDFEIEQEETERTRNLYRQLLQRTQHVKVWISFAQFELSSGKEGSVA 568
Query: 408 RYSGLY 413
+ +Y
Sbjct: 569 KCRQIY 574
Score = 50 (22.7 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 20/107 (18%), Positives = 40/107 (37%)
Query: 10 DGRPYVALGKVLSKQSKVAEARAIYAKG-SQATQGENPYIWQCWAVLENKLGN------- 61
D YVA K Q + R IY + ++ E +++ + + E K G+
Sbjct: 251 DEHLYVAFAKFEENQKEFERVRVIYKYALDRISKQEAQELFKNYTIFEKKFGDRRGIEDI 310
Query: 62 -IGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGL 107
+ K R ++ A+ + AW + L R++ + +
Sbjct: 311 IVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDAEADTVREVYERAI 357
>UNIPROTKB|F1MZT2 [details] [associations]
symbol:CRNKL1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000245 "spliceosomal
complex assembly" evidence=IEA] InterPro:IPR003107
InterPro:IPR011990 InterPro:IPR013026 Pfam:PF02184 PROSITE:PS50293
SMART:SM00386 GO:GO:0003723 Gene3D:1.25.40.10 GO:GO:0071013
GO:GO:0000245 OMA:KFTFAKI GeneTree:ENSGT00550000074931
EMBL:DAAA02035750 IPI:IPI01017666 Ensembl:ENSBTAT00000011148
Uniprot:F1MZT2
Length = 781
Score = 193 (73.0 bits), Expect = 8.7e-12, P = 8.7e-12
Identities = 72/299 (24%), Positives = 136/299 (45%)
Query: 64 KARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALL 123
+ R+ F+ + ++ I+ W +A E I++AR + + L N ++ A +
Sbjct: 149 RKRKTFEDNIRKNRTVISNWIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEM 208
Query: 124 EAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRF 183
E K + ARN++ +A P+ W ++ ME N ARQ+FER ++ P+ +
Sbjct: 209 EMKNRQVNHARNIWDRAITTLPRVNQFWYKYTYMEEMLGNIAGARQVFERWMEWRPEEQ- 267
Query: 184 AWHVWGIFEANMGFIDKGKKLL-KIGHA---VNPRDPVLLQSLALLEYKYSTANLARKLF 239
AWH + FE +D+ + + + H+ V+P D A E K+ ARK++
Sbjct: 268 AWHSYINFELRYKEVDRARTIYERYIHSLVLVHP-DVKNWIKYARFEEKHGYFAHARKVY 326
Query: 240 RRASEI-DPRH--QPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVL 296
RA E H + +++A+ E + + R +Y+ AL S E A + + +
Sbjct: 327 ERAVEFFGDEHMDEHLYVAFAKFEENQKEFERVRVIYKYALDRISKQE-AQELFKNYTIF 385
Query: 297 EQRVGN------LSAARRLFR--SSLNINSQSYITWMTWAQLEEDQGNSVRAEEIRNLY 347
E++ G+ + ++R F+ + N +Y W + +L E + AE +R +Y
Sbjct: 386 EKKFGDRRGIEDIIVSKRRFQYEEEVKANPHNYDAWFDYLRLVE---SDAEAETVREVY 441
Score = 156 (60.0 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 62/248 (25%), Positives = 116/248 (46%)
Query: 77 KGHIAAWHGWAVLE-LRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARN 135
K +I W +A+ E L + ++ RQ+ L+ ++ + + LL A+ ++
Sbjct: 458 KRYIYLWINYALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWLLYAQFEIRQKNLP 517
Query: 136 LFRQAT-----KCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVWGI 190
R+A KC PK+ + + ++E+Q R+L+E+ ++ P+N +W +
Sbjct: 518 FARRALGTSIGKC-PKN-KLFKGYIELELQLREFDRCRKLYEKFLEFGPENCTSWIKFAE 575
Query: 191 FEANMGFIDKGKKLLKIGHAVNPR-D-P-VLLQSLALLEYKYSTANLARKLFRRASEIDP 247
E +G I++ + + ++ + PR D P VL +S E + R L+RR +
Sbjct: 576 LETILGDIERARAIYELAIS-QPRLDMPEVLWKSYIDFEIEQEETERTRNLYRRLLQ-RT 633
Query: 248 RHQPVWIAWGWMEW---KEGNLDTARELYERA-LSIDSTTESAARC--LQAWGVLEQRVG 301
+H VWI++ E KEG+L R++YE A ++ + E R L++W E G
Sbjct: 634 QHVKVWISFAQFELSSGKEGSLAKCRQIYEEANKTMRNCEEKEERLMLLESWRNFEDEFG 693
Query: 302 NLSAARRL 309
S R+
Sbjct: 694 TASDKERV 701
Score = 148 (57.2 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 55/271 (20%), Positives = 122/271 (45%)
Query: 26 KVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARELFD-ASTVADKGHIAAWH 84
++ AR+IY + N +W +A +E K + AR ++D A T + + W+
Sbjct: 180 EIQRARSIYERALDVDY-RNITLWLKYAEMEMKNRQVNHARNIWDRAITTLPRVN-QFWY 237
Query: 85 GWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQ----A 140
+ +E GNI ARQ+ + +++ E + + E + ++AR ++ +
Sbjct: 238 KYTYMEEMLGNIAGARQVFERWMEW-RPEEQAWHSYINFELRYKEVDRARTIYERYIHSL 296
Query: 141 TKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVW---GIFEANMGF 197
+P +WI +++ E + AR+++ERAV+ H++ FE N
Sbjct: 297 VLVHP-DVKNWIKYARFEEKHGYFAHARKVYERAVEFFGDEHMDEHLYVAFAKFEENQKE 355
Query: 198 IDKGKKLLKIG-HAVNPRDPV-LLQSLALLEYKYSTAN------LARKLFRRASEI--DP 247
++ + + K ++ ++ L ++ + E K+ ++++ F+ E+ +P
Sbjct: 356 FERVRVIYKYALDRISKQEAQELFKNYTIFEKKFGDRRGIEDIIVSKRRFQYEEEVKANP 415
Query: 248 RHQPVWIAWGWMEWKEGNLDTARELYERALS 278
+ W + + + +T RE+YERA++
Sbjct: 416 HNYDAWFDYLRLVESDAEAETVREVYERAIA 446
Score = 130 (50.8 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 35/139 (25%), Positives = 73/139 (52%)
Query: 47 YIWQCWAVLEN-KLGNIGKARELFDAST--VADKGHIAA--WHGWAVLELRQGNIKKARQ 101
Y+W +A+ E + + + R+++ AS + K A W +A E+RQ N+ AR+
Sbjct: 462 YLWINYALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWLLYAQFEIRQKNLPFARR 521
Query: 102 LLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQ 161
L + C N+ +++ LE + +++ R L+ + + P++C SWI ++++E
Sbjct: 522 ALGTSIGKCPKNK-LFKGYIELELQLREFDRCRKLYEKFLEFGPENCTSWIKFAELETIL 580
Query: 162 ENNLAARQLFERAVQASPK 180
+ AR ++E A+ + P+
Sbjct: 581 GDIERARAIYELAI-SQPR 598
Score = 128 (50.1 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 43/202 (21%), Positives = 87/202 (43%)
Query: 151 WIAWSQME-MQQENNLAARQLFERAVQASPKNRFA----WHVWGIFEANMGFIDKGKKLL 205
WI ++ E ++ ++ RQ+++ +++ P +F W ++ FE + ++ L
Sbjct: 464 WINYALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWLLYAQFEIRQKNLPFARRAL 523
Query: 206 KIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGN 265
P++ L + LE + + RKL+ + E P + WI + +E G+
Sbjct: 524 GTSIGKCPKNK-LFKGYIELELQLREFDRCRKLYEKFLEFGPENCTSWIKFAELETILGD 582
Query: 266 LDTARELYERALSIDSTTESAARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWM 325
++ AR +YE A+S + +++ E R L+R L +Q W+
Sbjct: 583 IERARAIYELAIS-QPRLDMPEVLWKSYIDFEIEQEETERTRNLYRRLLQ-RTQHVKVWI 640
Query: 326 TWAQLEEDQGNSVRAEEIRNLY 347
++AQ E G + R +Y
Sbjct: 641 SFAQFELSSGKEGSLAKCRQIY 662
Score = 107 (42.7 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 35/161 (21%), Positives = 72/161 (44%)
Query: 49 WQCWAVLENKLGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLK 108
W +A E L I +AR +++ + D +I W +A +E++ + AR + + +
Sbjct: 168 WIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEMEMKNRQVNHARNIWDRAIT 227
Query: 109 FCGG-NEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAA 167
N++ Y+ + E N AR +F + + P+ A W ++ E++ + A
Sbjct: 228 TLPRVNQFWYKYTYMEEMLGN-IAGARQVFERWMEWRPEEQA-WHSYINFELRYKEVDRA 285
Query: 168 RQLFERAVQA----SPKNRFAWHVWGIFEANMGFIDKGKKL 204
R ++ER + + P + W + FE G+ +K+
Sbjct: 286 RTIYERYIHSLVLVHPDVK-NWIKYARFEEKHGYFAHARKV 325
Score = 84 (34.6 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 28/129 (21%), Positives = 56/129 (43%)
Query: 236 RKLFRRASEIDPRHQ----PVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQ 291
R++++ + E+ P + +W+ + E ++ NL AR RAL + +
Sbjct: 482 RQVYQASLELIPHKKFTFAKMWLLYAQFEIRQKNLPFAR----RALGTSIGKCPKNKLFK 537
Query: 292 AWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEIRNLYFQQR 351
+ LE ++ R+L+ L ++ +W+ +A+LE G+ RA I L Q
Sbjct: 538 GYIELELQLREFDRCRKLYEKFLEFGPENCTSWIKFAELETILGDIERARAIYELAISQP 597
Query: 352 TEVVDDASW 360
+ + W
Sbjct: 598 RLDMPEVLW 606
Score = 52 (23.4 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 20/107 (18%), Positives = 41/107 (38%)
Query: 10 DGRPYVALGKVLSKQSKVAEARAIYAKG-SQATQGENPYIWQCWAVLENKLGN------- 61
D YVA K Q + R IY + ++ E +++ + + E K G+
Sbjct: 339 DEHLYVAFAKFEENQKEFERVRVIYKYALDRISKQEAQELFKNYTIFEKKFGDRRGIEDI 398
Query: 62 -IGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGL 107
+ K R ++ A+ + AW + L + R++ + +
Sbjct: 399 IVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDAEAETVREVYERAI 445
>UNIPROTKB|F1PYE9 [details] [associations]
symbol:CRNKL1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006396 "RNA processing" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR003107
InterPro:IPR011990 InterPro:IPR013026 Pfam:PF02184 PROSITE:PS50293
SMART:SM00386 GO:GO:0005622 GO:GO:0006396 Gene3D:1.25.40.10
OMA:KFTFAKI GeneTree:ENSGT00550000074931 EMBL:AAEX03013754
Ensembl:ENSCAFT00000008599 Uniprot:F1PYE9
Length = 797
Score = 191 (72.3 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 71/302 (23%), Positives = 136/302 (45%)
Query: 64 KARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALL 123
+ R+ F+ + ++ I+ W +A E I++AR + + L N ++ A +
Sbjct: 170 RKRKTFEDNIRKNRTVISNWIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEM 229
Query: 124 EAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRF 183
E K + ARN++ +A P+ W ++ ME N ARQ+FER ++ P+ +
Sbjct: 230 EMKNRQVNHARNIWDRAITTLPRVNQFWYKYTYMEEMLGNIAGARQVFERWMEWQPEEQ- 288
Query: 184 AWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQ-------SLALLEYKYSTANLAR 236
AWH + FE +D+ + + + +N + VL+ A E K+ AR
Sbjct: 289 AWHSYINFELRYKEVDRARTIY---YFLNSPELVLVHPDVKNWIKYARFEEKHGYFAHAR 345
Query: 237 KLFRRASEI-DPRH--QPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAW 293
K++ RA E H + +++A+ E + + R +Y+ AL S E A + +
Sbjct: 346 KVYERAVEFFGDEHMDEHLYVAFAKFEENQKEFERVRVIYKYALDRISKQE-AQELFKNY 404
Query: 294 GVLEQRVGN------LSAARRLFR--SSLNINSQSYITWMTWAQLEEDQGNSVRAEEIRN 345
+ E++ G+ + ++R F+ + N +Y W + +L E + AE +R
Sbjct: 405 TIFEKKFGDRRGIEDIIVSKRRFQYEEEVKANPHNYDAWFDYLRLVE---SDAEAETVRE 461
Query: 346 LY 347
+Y
Sbjct: 462 VY 463
Score = 153 (58.9 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 62/248 (25%), Positives = 114/248 (45%)
Query: 77 KGHIAAWHGWAVLE-LRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAK-----ANRY 130
K +I W +A+ E L + ++ RQ+ L+ ++ + + LL A+ N
Sbjct: 480 KRYIYLWVNYALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWLLYAQFEIRQKNLP 539
Query: 131 EQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVWGI 190
L KC PK+ + + ++E+Q R+L+E+ ++ P+N +W +
Sbjct: 540 VSVSLLGTSIGKC-PKN-KLFKGYIELELQLREFDRCRKLYEKFLEFGPENCTSWIKFAE 597
Query: 191 FEANMGFIDKGKKLLKIGHAVNPR-D-P-VLLQSLALLEYKYSTANLARKLFRRASEIDP 247
E +G I++ + + ++ + PR D P VL +S E + R L+RR +
Sbjct: 598 LETILGDIERARAIYELAIS-QPRLDMPEVLWKSYIDFEIEQEETERTRNLYRRLLQ-RT 655
Query: 248 RHQPVWIAWGWMEW---KEGNLDTARELYERA-LSIDSTTESAARC--LQAWGVLEQRVG 301
+H VWI++ E KEG+L R++YE A ++ + E R L++W E G
Sbjct: 656 QHVKVWISFAQFELSSRKEGSLAKCRQIYEEANKTMRNCEEKEERLMLLESWRSFEDEFG 715
Query: 302 NLSAARRL 309
+S R+
Sbjct: 716 TVSDKERV 723
Score = 145 (56.1 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 55/272 (20%), Positives = 122/272 (44%)
Query: 26 KVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARELFD-ASTVADKGHIAAWH 84
++ AR+IY + N +W +A +E K + AR ++D A T + + W+
Sbjct: 201 EIQRARSIYERALDVDY-RNITLWLKYAEMEMKNRQVNHARNIWDRAITTLPRVN-QFWY 258
Query: 85 GWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFR-----Q 139
+ +E GNI ARQ+ + +++ E + + E + ++AR ++ +
Sbjct: 259 KYTYMEEMLGNIAGARQVFERWMEW-QPEEQAWHSYINFELRYKEVDRARTIYYFLNSPE 317
Query: 140 ATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVW---GIFEANMG 196
+P +WI +++ E + AR+++ERAV+ H++ FE N
Sbjct: 318 LVLVHP-DVKNWIKYARFEEKHGYFAHARKVYERAVEFFGDEHMDEHLYVAFAKFEENQK 376
Query: 197 FIDKGKKLLKIG-HAVNPRDPV-LLQSLALLEYKYSTAN------LARKLFRRASEI--D 246
++ + + K ++ ++ L ++ + E K+ ++++ F+ E+ +
Sbjct: 377 EFERVRVIYKYALDRISKQEAQELFKNYTIFEKKFGDRRGIEDIIVSKRRFQYEEEVKAN 436
Query: 247 PRHQPVWIAWGWMEWKEGNLDTARELYERALS 278
P + W + + + +T RE+YERA++
Sbjct: 437 PHNYDAWFDYLRLVESDAEAETVREVYERAIA 468
Score = 125 (49.1 bits), Expect = 0.00024, P = 0.00024
Identities = 34/139 (24%), Positives = 72/139 (51%)
Query: 47 YIWQCWAVLEN-KLGNIGKARELFDAST--VADKGHIAA--WHGWAVLELRQGNIKKARQ 101
Y+W +A+ E + + + R+++ AS + K A W +A E+RQ N+ +
Sbjct: 484 YLWVNYALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWLLYAQFEIRQKNLPVSVS 543
Query: 102 LLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQ 161
LL + C N+ +++ LE + +++ R L+ + + P++C SWI ++++E
Sbjct: 544 LLGTSIGKCPKNK-LFKGYIELELQLREFDRCRKLYEKFLEFGPENCTSWIKFAELETIL 602
Query: 162 ENNLAARQLFERAVQASPK 180
+ AR ++E A+ + P+
Sbjct: 603 GDIERARAIYELAI-SQPR 620
Score = 119 (46.9 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 42/202 (20%), Positives = 85/202 (42%)
Query: 151 WIAWSQME-MQQENNLAARQLFERAVQASPKNRFA----WHVWGIFEANMGFIDKGKKLL 205
W+ ++ E ++ ++ RQ+++ +++ P +F W ++ FE + LL
Sbjct: 486 WVNYALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWLLYAQFEIRQKNLPVSVSLL 545
Query: 206 KIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGN 265
P++ L + LE + + RKL+ + E P + WI + +E G+
Sbjct: 546 GTSIGKCPKNK-LFKGYIELELQLREFDRCRKLYEKFLEFGPENCTSWIKFAELETILGD 604
Query: 266 LDTARELYERALSIDSTTESAARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWM 325
++ AR +YE A+S + +++ E R L+R L +Q W+
Sbjct: 605 IERARAIYELAIS-QPRLDMPEVLWKSYIDFEIEQEETERTRNLYRRLLQ-RTQHVKVWI 662
Query: 326 TWAQLEEDQGNSVRAEEIRNLY 347
++AQ E + R +Y
Sbjct: 663 SFAQFELSSRKEGSLAKCRQIY 684
Score = 93 (37.8 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 34/162 (20%), Positives = 69/162 (42%)
Query: 49 WQCWAVLENKLGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLK 108
W +A E L I +AR +++ + D +I W +A +E++ + AR + + +
Sbjct: 189 WIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEMEMKNRQVNHARNIWDRAIT 248
Query: 109 FCGG-NEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAA 167
N++ Y+ + E N AR +F + + P+ A W ++ E++ + A
Sbjct: 249 TLPRVNQFWYKYTYMEEMLGN-IAGARQVFERWMEWQPEEQA-WHSYINFELRYKEVDRA 306
Query: 168 RQLF-----ERAVQASPKNRFAWHVWGIFEANMGFIDKGKKL 204
R ++ V P + W + FE G+ +K+
Sbjct: 307 RTIYYFLNSPELVLVHPDVK-NWIKYARFEEKHGYFAHARKV 347
Score = 78 (32.5 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 26/129 (20%), Positives = 57/129 (44%)
Query: 236 RKLFRRASEIDPRHQ----PVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQ 291
R++++ + E+ P + +W+ + E ++ NL + L SI ++ + +
Sbjct: 504 RQVYQASLELIPHKKFTFAKMWLLYAQFEIRQKNLPVSVSLL--GTSIGKCPKN--KLFK 559
Query: 292 AWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEIRNLYFQQR 351
+ LE ++ R+L+ L ++ +W+ +A+LE G+ RA I L Q
Sbjct: 560 GYIELELQLREFDRCRKLYEKFLEFGPENCTSWIKFAELETILGDIERARAIYELAISQP 619
Query: 352 TEVVDDASW 360
+ + W
Sbjct: 620 RLDMPEVLW 628
Score = 52 (23.4 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
Identities = 20/107 (18%), Positives = 41/107 (38%)
Query: 10 DGRPYVALGKVLSKQSKVAEARAIYAKG-SQATQGENPYIWQCWAVLENKLGN------- 61
D YVA K Q + R IY + ++ E +++ + + E K G+
Sbjct: 361 DEHLYVAFAKFEENQKEFERVRVIYKYALDRISKQEAQELFKNYTIFEKKFGDRRGIEDI 420
Query: 62 -IGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGL 107
+ K R ++ A+ + AW + L + R++ + +
Sbjct: 421 IVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDAEAETVREVYERAI 467
>UNIPROTKB|F1P3Q8 [details] [associations]
symbol:CRNKL1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000245 "spliceosomal complex assembly"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR003107
InterPro:IPR011990 InterPro:IPR013026 Pfam:PF02184 PROSITE:PS50293
SMART:SM00386 GO:GO:0003723 Gene3D:1.25.40.10 GO:GO:0071013
GO:GO:0000245 OMA:KFTFAKI GeneTree:ENSGT00550000074931
EMBL:AADN02044253 EMBL:AADN02044254 IPI:IPI00599254
Ensembl:ENSGALT00000013732 Uniprot:F1P3Q8
Length = 704
Score = 189 (71.6 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 68/296 (22%), Positives = 134/296 (45%)
Query: 64 KARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALL 123
+ R+ F+ + ++ I+ W +A E I++AR + + L N ++ A +
Sbjct: 81 RKRKTFEDNIRKNRTVISNWIKYAQWEESLKEIQRARSIYERALDVDYRNVTLWLKYAEM 140
Query: 124 EAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRF 183
E K + ARN++ +A P+ W ++ ME N +RQ+FER ++ P+ +
Sbjct: 141 EMKNRQVNHARNIWDRAITTLPRVNQFWYKYTYMEEMLGNVAGSRQVFERWMEWQPEEQ- 199
Query: 184 AWHVWGIFEANMGFIDKGKKL-LKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRA 242
AWH + FE +D+ + + + + V+P D A E K+ ARK++ RA
Sbjct: 200 AWHSYINFELRYKEVDRARTIYIALLVIVHP-DVKNWIKYARFEEKHCYFAHARKVYERA 258
Query: 243 SEI-DPRH--QPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQR 299
E H + +++A+ E + + R +Y+ AL + A + + + E++
Sbjct: 259 VEFFGEEHMDEHLYVAFAKFEENQKEFERVRVIYKYALD-RIPKQDAQNLFKNYTIFEKK 317
Query: 300 VGN------LSAARRLFR--SSLNINSQSYITWMTWAQLEEDQGNSVRAEEIRNLY 347
G+ + ++R F+ + N +Y W + +L E + AE +R +Y
Sbjct: 318 FGDRRGIEDIIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDAD---AETVREVY 370
Score = 157 (60.3 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 62/248 (25%), Positives = 118/248 (47%)
Query: 77 KGHIAAWHGWAVLE-LRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARN 135
K +I W +A+ E L + ++ RQ+ ++ ++ + + LL A+ ++
Sbjct: 387 KRYIYLWINYALYEELEAKDPERTRQVYQACIELLPHKKFTFAKIWLLYAQFEIRQKNLP 446
Query: 136 LFRQAT-----KCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVWGI 190
L R+A KC PK+ + + ++E+Q R+L+E+ ++ +P+N +W +
Sbjct: 447 LARRALGTSIGKC-PKN-KLFKGYIELELQLREFDRCRKLYEKFLEFAPENCTSWIKFAE 504
Query: 191 FEANMGFIDKGKKLLKIGHAVNPR-D-P-VLLQSLALLEYKYSTANLARKLFRRASEIDP 247
E +G ID+ + + ++ + PR D P VL +S E + R L+RR +
Sbjct: 505 LETILGDIDRARAIYELAIS-QPRLDMPEVLWKSYIDFEIEQEEYEKTRNLYRRLLQ-RT 562
Query: 248 RHQPVWIAWGWMEW---KEGNLDTARELYERA-LSIDSTTESAARC--LQAWGVLEQRVG 301
+H VWI++ E KE +L R++YE A ++ + E R L++W E+ G
Sbjct: 563 QHVKVWISFAQFELSAGKEESLSKCRQIYEEANKAMRNCEEKEERVMLLESWKTFEEEFG 622
Query: 302 NLSAARRL 309
S R+
Sbjct: 623 TDSTKERI 630
Score = 153 (58.9 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 53/267 (19%), Positives = 119/267 (44%)
Query: 26 KVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARELFD-ASTVADKGHIAAWH 84
++ AR+IY + N +W +A +E K + AR ++D A T + + W+
Sbjct: 112 EIQRARSIYERALDVDY-RNVTLWLKYAEMEMKNRQVNHARNIWDRAITTLPRVN-QFWY 169
Query: 85 GWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCN 144
+ +E GN+ +RQ+ + +++ E + + E + ++AR ++
Sbjct: 170 KYTYMEEMLGNVAGSRQVFERWMEW-QPEEQAWHSYINFELRYKEVDRARTIYIALLVIV 228
Query: 145 PKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVW---GIFEANMGFIDKG 201
+WI +++ E + AR+++ERAV+ + H++ FE N ++
Sbjct: 229 HPDVKNWIKYARFEEKHCYFAHARKVYERAVEFFGEEHMDEHLYVAFAKFEENQKEFERV 288
Query: 202 KKLLKIGHAVNPRDPV--LLQSLALLEYKYSTAN------LARKLFRRASEI--DPRHQP 251
+ + K P+ L ++ + E K+ ++++ F+ E+ +P +
Sbjct: 289 RVIYKYALDRIPKQDAQNLFKNYTIFEKKFGDRRGIEDIIVSKRRFQYEEEVKANPHNYD 348
Query: 252 VWIAWGWMEWKEGNLDTARELYERALS 278
W + + + + +T RE+YERA++
Sbjct: 349 AWFDYLRLVESDADAETVREVYERAIA 375
Score = 134 (52.2 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 44/202 (21%), Positives = 86/202 (42%)
Query: 151 WIAWSQME-MQQENNLAARQLFERAVQASPKNRFA----WHVWGIFEANMGFIDKGKKLL 205
WI ++ E ++ ++ RQ+++ ++ P +F W ++ FE + ++ L
Sbjct: 393 WINYALYEELEAKDPERTRQVYQACIELLPHKKFTFAKIWLLYAQFEIRQKNLPLARRAL 452
Query: 206 KIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGN 265
P++ L + LE + + RKL+ + E P + WI + +E G+
Sbjct: 453 GTSIGKCPKNK-LFKGYIELELQLREFDRCRKLYEKFLEFAPENCTSWIKFAELETILGD 511
Query: 266 LDTARELYERALSIDSTTESAARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWM 325
+D AR +YE A+S + +++ E R L+R L +Q W+
Sbjct: 512 IDRARAIYELAIS-QPRLDMPEVLWKSYIDFEIEQEEYEKTRNLYRRLLQ-RTQHVKVWI 569
Query: 326 TWAQLEEDQGNSVRAEEIRNLY 347
++AQ E G + R +Y
Sbjct: 570 SFAQFELSAGKEESLSKCRQIY 591
Score = 132 (51.5 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 49/246 (19%), Positives = 112/246 (45%)
Query: 47 YIWQCWAVLEN-KLGNIGKARELFDA--STVADKGHIAA--WHGWAVLELRQGNIKKARQ 101
Y+W +A+ E + + + R+++ A + K A W +A E+RQ N+ AR+
Sbjct: 391 YLWINYALYEELEAKDPERTRQVYQACIELLPHKKFTFAKIWLLYAQFEIRQKNLPLARR 450
Query: 102 LLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQ 161
L + C N+ +++ LE + +++ R L+ + + P++C SWI ++++E
Sbjct: 451 ALGTSIGKCPKNK-LFKGYIELELQLREFDRCRKLYEKFLEFAPENCTSWIKFAELETIL 509
Query: 162 ENNLAARQLFERAVQASPK---NRFAWHVWGIFEANMGFIDKGKKLLK--IGHAVNPRDP 216
+ AR ++E A+ + P+ W + FE +K + L + + + +
Sbjct: 510 GDIDRARAIYELAI-SQPRLDMPEVLWKSYIDFEIEQEEYEKTRNLYRRLLQRTQHVKVW 568
Query: 217 VLLQSLALLEYKYSTANLARKLFRRASEI----DPRHQPVWIAWGWMEWKEG-NLDTARE 271
+ L K + + R+++ A++ + + + V + W ++E D+ +E
Sbjct: 569 ISFAQFELSAGKEESLSKCRQIYEEANKAMRNCEEKEERVMLLESWKTFEEEFGTDSTKE 628
Query: 272 LYERAL 277
E+ +
Sbjct: 629 RIEKLM 634
Score = 86 (35.3 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 25/124 (20%), Positives = 57/124 (45%)
Query: 49 WQCWAVLENKLGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLK 108
W +A E L I +AR +++ + D ++ W +A +E++ + AR + + +
Sbjct: 100 WIKYAQWEESLKEIQRARSIYERALDVDYRNVTLWLKYAEMEMKNRQVNHARNIWDRAIT 159
Query: 109 FCGG-NEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAA 167
N++ Y+ + E N +R +F + + P+ A W ++ E++ + A
Sbjct: 160 TLPRVNQFWYKYTYMEEMLGN-VAGSRQVFERWMEWQPEEQA-WHSYINFELRYKEVDRA 217
Query: 168 RQLF 171
R ++
Sbjct: 218 RTIY 221
Score = 82 (33.9 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 28/129 (21%), Positives = 55/129 (42%)
Query: 236 RKLFRRASEIDPRHQ----PVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQ 291
R++++ E+ P + +W+ + E ++ NL AR RAL + +
Sbjct: 411 RQVYQACIELLPHKKFTFAKIWLLYAQFEIRQKNLPLAR----RALGTSIGKCPKNKLFK 466
Query: 292 AWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEIRNLYFQQR 351
+ LE ++ R+L+ L ++ +W+ +A+LE G+ RA I L Q
Sbjct: 467 GYIELELQLREFDRCRKLYEKFLEFAPENCTSWIKFAELETILGDIDRARAIYELAISQP 526
Query: 352 TEVVDDASW 360
+ + W
Sbjct: 527 RLDMPEVLW 535
>ZFIN|ZDB-GENE-040426-694 [details] [associations]
symbol:crnkl1 "crooked neck pre-mRNA splicing
factor-like 1 (Drosophila)" species:7955 "Danio rerio" [GO:0005622
"intracellular" evidence=IEA] [GO:0006396 "RNA processing"
evidence=IEA] InterPro:IPR003107 InterPro:IPR011990
InterPro:IPR013026 Pfam:PF02184 PROSITE:PS50293 SMART:SM00386
ZFIN:ZDB-GENE-040426-694 GO:GO:0005622 GO:GO:0006396
Gene3D:1.25.40.10 GeneTree:ENSGT00550000074931 EMBL:CABZ01008082
EMBL:CABZ01008083 EMBL:CABZ01008084 IPI:IPI00932828
Ensembl:ENSDART00000112689 ArrayExpress:E7FGM7 Bgee:E7FGM7
Uniprot:E7FGM7
Length = 754
Score = 195 (73.7 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 70/296 (23%), Positives = 130/296 (43%)
Query: 64 KARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALL 123
K R+ F+ + ++ I+ W +A E ++++R + + L N ++ A +
Sbjct: 64 KKRKGFEDNIRKNRTVISNWIKYAQWEESLQEVQRSRSIYERALDVDHRNITLWLKYAEM 123
Query: 124 EAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRF 183
E K + ARN++ +A P+ W ++ ME N RQ+FER ++ P+ +
Sbjct: 124 EMKNRQVNHARNIWDRAITILPRVNQFWYKYTYMEEMLGNIAGCRQVFERWMEWEPEEQ- 182
Query: 184 AWHVWGIFEANMGFIDKGKKLL-KIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRA 242
AWH + FE +DK + + K V+P ++ A E K+ RK+F RA
Sbjct: 183 AWHSYINFELRYKEVDKARSIYEKALVMVHPEVKNWIK-YAHFEEKHGYVARGRKVFERA 241
Query: 243 SEIDPRHQP---VWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQR 299
E Q +++A+ E K+ + R +Y+ AL + A + + V E+R
Sbjct: 242 VEFFGEEQVSENLYVAFARFEEKQKEFERVRVIYKYALD-RIPKQQAQELFKNYTVFEKR 300
Query: 300 VGN--------LSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEIRNLY 347
G+ +S R + + N +Y W + +L E + A+ +R +Y
Sbjct: 301 FGDRRGIEDVIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDAD---ADTVREVY 353
Score = 156 (60.0 bits), Expect = 7.5e-07, Sum P(2) = 7.5e-07
Identities = 53/267 (19%), Positives = 121/267 (45%)
Query: 26 KVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARELFD-ASTVADKGHIAAWH 84
+V +R+IY + N +W +A +E K + AR ++D A T+ + + W+
Sbjct: 95 EVQRSRSIYERALDVDH-RNITLWLKYAEMEMKNRQVNHARNIWDRAITILPRVN-QFWY 152
Query: 85 GWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCN 144
+ +E GNI RQ+ + +++ E + + E + ++AR+++ +A
Sbjct: 153 KYTYMEEMLGNIAGCRQVFERWMEW-EPEEQAWHSYINFELRYKEVDKARSIYEKALVMV 211
Query: 145 PKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVW---GIFEANMGFIDKG 201
+WI ++ E + R++FERAV+ + + + +++ FE ++
Sbjct: 212 HPEVKNWIKYAHFEEKHGYVARGRKVFERAVEFFGEEQVSENLYVAFARFEEKQKEFERV 271
Query: 202 KKLLKIGHAVNPRDPV--LLQSLALLEYKYSTAN------LARKLFRRASEI--DPRHQP 251
+ + K P+ L ++ + E ++ ++++ F+ E+ +P +
Sbjct: 272 RVIYKYALDRIPKQQAQELFKNYTVFEKRFGDRRGIEDVIVSKRRFQYEEEVKANPHNYD 331
Query: 252 VWIAWGWMEWKEGNLDTARELYERALS 278
W + + + + DT RE+YERA++
Sbjct: 332 AWFDYLRLVESDADADTVREVYERAIA 358
Score = 37 (18.1 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 7/29 (24%), Positives = 16/29 (55%)
Query: 382 EKSSYKEPSAYSPGDNESTDDEASVSRYS 410
++ E S+ S D+ES +D+ + ++
Sbjct: 719 DRDDEDESSSSSSSDSESDEDQKDKTEHN 747
>WB|WBGene00019762 [details] [associations]
symbol:M03F8.3 species:6239 "Caenorhabditis elegans"
[GO:0005622 "intracellular" evidence=IEA] [GO:0006396 "RNA
processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0018996 "molting
cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] InterPro:IPR003107 InterPro:IPR011990
InterPro:IPR013026 Pfam:PF02184 PROSITE:PS50293 SMART:SM00386
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0018996
GO:GO:0040011 GO:GO:0000003 GO:GO:0005622 GO:GO:0006396
Gene3D:1.25.40.10 eggNOG:NOG327505 KO:K12869 HOGENOM:HOG000207972
OMA:KFTFAKI GeneTree:ENSGT00550000074931 EMBL:FO080495
RefSeq:NP_001122979.1 ProteinModelPortal:A9D4S6 SMR:A9D4S6
STRING:A9D4S6 PaxDb:A9D4S6 EnsemblMetazoa:M03F8.3b GeneID:178979
KEGG:cel:CELE_M03F8.3 UCSC:M03F8.3a CTD:178979 WormBase:M03F8.3b
InParanoid:A9D4S6 NextBio:903380 ArrayExpress:A9D4S6 Uniprot:A9D4S6
Length = 747
Score = 186 (70.5 bits), Expect = 4.8e-11, P = 4.8e-11
Identities = 70/298 (23%), Positives = 133/298 (44%)
Query: 64 KARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALL 123
K R+ F+ ++ +A W + E G I++AR + + L + I+ A +
Sbjct: 70 KKRKEFEDGIRKNRMQLANWIKYGKWEESIGEIQRARSVFERALDVDHRSISIWLQYAEM 129
Query: 124 EAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRF 183
E + + ARN+F +A P++ W+ +S ME EN ARQ+FER ++ P +
Sbjct: 130 EMRCKQINHARNVFDRAITIMPRAMQFWLKYSYMEEVIENIPGARQIFERWIEWEPPEQ- 188
Query: 184 AWHVWGIFEANMGFIDKGK----KLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLF 239
AW + FE ID+ + + L + H +N ++ + A E + AR +
Sbjct: 189 AWQTYINFELRYKEIDRARSVYQRFLHV-HGINVQNWI---KYAKFEERNGYIGNARAAY 244
Query: 240 RRASEI---DPRHQPVWIAWGWMEWKEGNLDTARELYERAL-SIDS--TTESAARCLQAW 293
+A E + ++ V +A+ E ++ + AR +++ L ++ S T E Q
Sbjct: 245 EKAMEYFGEEDINETVLVAFALFEERQKEHERARGIFKYGLDNLPSNRTEEIFKHYTQHE 304
Query: 294 GVLEQRVGN----LSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEIRNLY 347
+RVG +S + + + N +Y W + +L E++ EE+ ++Y
Sbjct: 305 KKFGERVGIEDVIISKRKTQYEKMVEENGYNYDAWFDYLRLLENEETD--REEVEDVY 360
Score = 138 (53.6 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 58/242 (23%), Positives = 108/242 (44%)
Query: 79 HIAAWHGWAVLE-LRQGNIKKARQLLAKGLKFCGGNEYIYQTLALL----EAKANRYEQA 133
+I W +A+ E L + +ARQ+ + + + + ++ E + A
Sbjct: 382 YIYLWINYALYEELVAKDFDRARQVYKACIDIIPHKTFTFAKVWIMFAHFEIRQLDLNAA 441
Query: 134 RNLFRQAT-KCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVWGIFE 192
R + A KC PK + A+ +E+Q R+L+E+ +++SP++ W + E
Sbjct: 442 RKIMGVAIGKC-PKD-KLFRAYIDLELQLREFDRCRKLYEKFLESSPESSQTWIKFAELE 499
Query: 193 ANMGFIDKGKKLLKIGHAVNPRD-PVLLQSLALLEYKYSTAN--LARKLFRRASEIDPRH 249
+G D+ + + I D P LL A ++++ + AR L+ + H
Sbjct: 500 TLLGDTDRSRAVFTIAVQQPALDMPELLWK-AYIDFEIACEEHEKARDLYETLLQ-RTNH 557
Query: 250 QPVWIAWGWMEWKEGNLDTARELYERA-LSIDSTT-ESAARCLQAWGVLEQRVGNLSAAR 307
VWI+ E GN + AR+ +ERA S+++ E L+AW E + G+ A +
Sbjct: 558 IKVWISMAEFEQTIGNFEGARKAFERANQSLENAEKEERLMLLEAWKECETKSGDQEALK 617
Query: 308 RL 309
R+
Sbjct: 618 RV 619
Score = 137 (53.3 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 52/240 (21%), Positives = 113/240 (47%)
Query: 47 YIWQCWAVLENKLG-NIGKARELFDA--STVADKGHIAA--WHGWAVLELRQGNIKKARQ 101
Y+W +A+ E + + +AR+++ A + K A W +A E+RQ ++ AR+
Sbjct: 384 YLWINYALYEELVAKDFDRARQVYKACIDIIPHKTFTFAKVWIMFAHFEIRQLDLNAARK 443
Query: 102 LLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQ 161
++ + C ++ +++ LE + +++ R L+ + + +P+S +WI ++++E
Sbjct: 444 IMGVAIGKCPKDK-LFRAYIDLELQLREFDRCRKLYEKFLESSPESSQTWIKFAELETLL 502
Query: 162 ENNLAARQLFERAVQ--ASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLL 219
+ +R +F AVQ A W + FE +K + L + + R +
Sbjct: 503 GDTDRSRAVFTIAVQQPALDMPELLWKAYIDFEIACEEHEKARDLYE---TLLQRTNHIK 559
Query: 220 QSLALLEYKYSTANL--ARKLFRRAS---EIDPRHQPVWI--AWGWMEWKEGNLDTAREL 272
+++ E++ + N ARK F RA+ E + + + + AW E K G+ + + +
Sbjct: 560 VWISMAEFEQTIGNFEGARKAFERANQSLENAEKEERLMLLEAWKECETKSGDQEALKRV 619
Score = 124 (48.7 bits), Expect = 6.2e-09, Sum P(2) = 6.2e-09
Identities = 42/195 (21%), Positives = 77/195 (39%)
Query: 49 WQCWAVLENKLGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLK 108
W + E +G I +AR +F+ + D I+ W +A +E+R I AR + + +
Sbjct: 89 WIKYGKWEESIGEIQRARSVFERALDVDHRSISIWLQYAEMEMRCKQINHARNVFDRAIT 148
Query: 109 FCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAAR 168
+ + +E AR +F + + P A W + E++ + AR
Sbjct: 149 IMPRAMQFWLKYSYMEEVIENIPGARQIFERWIEWEPPEQA-WQTYINFELRYKEIDRAR 207
Query: 169 QLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLL-KIGHAVNPRD--PVLLQSLALL 225
+++R + N W + FE G+I + K D +L + AL
Sbjct: 208 SVYQRFLHVHGINVQNWIKYAKFEERNGYIGNARAAYEKAMEYFGEEDINETVLVAFALF 267
Query: 226 EYKYSTANLARKLFR 240
E + AR +F+
Sbjct: 268 EERQKEHERARGIFK 282
Score = 115 (45.5 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 40/199 (20%), Positives = 91/199 (45%)
Query: 14 YVALGKVLSKQSKVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARELFD-AS 72
++ GK ++ AR+++ + + IW +A +E + I AR +FD A
Sbjct: 89 WIKYGKWEESIGEIQRARSVFERALDVDH-RSISIWLQYAEMEMRCKQINHARNVFDRAI 147
Query: 73 TVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKANRYEQ 132
T+ + + W ++ +E NI ARQ+ + +++ E +QT E + ++
Sbjct: 148 TIMPRA-MQFWLKYSYMEEVIENIPGARQIFERWIEW-EPPEQAWQTYINFELRYKEIDR 205
Query: 133 ARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPK---NRFAWHVWG 189
AR+++++ + + +WI +++ E + AR +E+A++ + N +
Sbjct: 206 ARSVYQRFLHVHGINVQNWIKYAKFEERNGYIGNARAAYEKAMEYFGEEDINETVLVAFA 265
Query: 190 IFEANMGFIDKGKKLLKIG 208
+FE ++ + + K G
Sbjct: 266 LFEERQKEHERARGIFKYG 284
Score = 91 (37.1 bits), Expect = 6.2e-09, Sum P(2) = 6.2e-09
Identities = 29/130 (22%), Positives = 63/130 (48%)
Query: 235 ARKLFRRASEIDPRHQ----PVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCL 290
AR++++ +I P VWI + E ++ +L+ AR++ ++I + +
Sbjct: 403 ARQVYKACIDIIPHKTFTFAKVWIMFAHFEIRQLDLNAARKIM--GVAIGKCPKD--KLF 458
Query: 291 QAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEIRNLYFQQ 350
+A+ LE ++ R+L+ L + +S TW+ +A+LE G++ R+ + + QQ
Sbjct: 459 RAYIDLELQLREFDRCRKLYEKFLESSPESSQTWIKFAELETLLGDTDRSRAVFTIAVQQ 518
Query: 351 RTEVVDDASW 360
+ + W
Sbjct: 519 PALDMPELLW 528
>DICTYBASE|DDB_G0278819 [details] [associations]
symbol:DDB_G0278819 "HAT repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0006396 "RNA
processing" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005681
"spliceosomal complex" evidence=IEA;ISS] [GO:0003723 "RNA binding"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0000245 "spliceosomal complex assembly"
evidence=ISS] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR003107 InterPro:IPR011990
InterPro:IPR013026 Pfam:PF02184 SMART:SM00386
dictyBase:DDB_G0278819 GO:GO:0005737 GenomeReviews:CM000152_GR
GO:GO:0016607 GO:GO:0005681 GO:GO:0003723 Gene3D:1.25.40.10
EMBL:AAFI02000024 GO:GO:0000245 eggNOG:NOG327505 KO:K12869
OMA:KFTFAKI RefSeq:XP_641986.1 ProteinModelPortal:Q54XP4
STRING:Q54XP4 PRIDE:Q54XP4 EnsemblProtists:DDB0233480
GeneID:8621718 KEGG:ddi:DDB_G0278819 ProtClustDB:CLSZ2729102
Uniprot:Q54XP4
Length = 705
Score = 175 (66.7 bits), Expect = 7.0e-10, P = 7.0e-10
Identities = 68/292 (23%), Positives = 130/292 (44%)
Query: 64 KARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALL 123
+ R+ +++ ++ A + +A E Q ++ +AR + + L ++ A +
Sbjct: 59 RKRQQYESLLGRNRKTAAIYIKYAAWEESQKDLTRARSVFERFLDIDHRIPTVWIKYAEM 118
Query: 124 EAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRF 183
E K ARN++ +A P+ W ++ ME N AAR +FER +Q P+ +
Sbjct: 119 EMKNKNINLARNIWDRAVCLLPRVSQLWFKYTFMEDMLGNYPAARAIFERWMQWKPEPQ- 177
Query: 184 AWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRAS 243
AW+ + FE + + + + + V+P ++ E + AR +F+RA
Sbjct: 178 AWNSYLKFEQRLKLFENTRLIFEKYILVHPYIKTWIK-YTKFEERLGNIENARTIFQRAI 236
Query: 244 EI---DPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCL-QAWGVLEQR 299
E D + ++IA+ E K ++ AR +Y+ A ID +S A+ L + E++
Sbjct: 237 EFLGEDGNDEQLFIAFAKFEEKYKEIERARVIYKYA--IDHVPKSRAKDLFDTFTNFEKQ 294
Query: 300 VGN--------LSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEI 343
G+ L R + + NS++Y W + ++EE G + EI
Sbjct: 295 HGDRIGIEDVVLGKKRFQYEEEIKKNSKNYDIWFDYLKMEEINGEIEKTREI 346
Score = 141 (54.7 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 53/228 (23%), Positives = 100/228 (43%)
Query: 131 EQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVWGI 190
EQ + + + PK+ + Q E++ + L RQ +E + + K + +
Sbjct: 25 EQILRVAHENQQTLPKAPPKQVITDQEELE-DYRLRKRQQYESLLGRNRKTAAIYIKYAA 83
Query: 191 FEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDPRHQ 250
+E + + + + + + ++ R P + A +E K NLAR ++ RA + PR
Sbjct: 84 WEESQKDLTRARSVFERFLDIDHRIPTVWIKYAEMEMKNKNINLARNIWDRAVCLLPRVS 143
Query: 251 PVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQRVGNLSAARRLF 310
+W + +ME GN AR ++ER + ++ L+ EQR+ R +F
Sbjct: 144 QLWFKYTFMEDMLGNYPAARAIFERWMQWKPEPQAWNSYLK----FEQRLKLFENTRLIF 199
Query: 311 RSSLNINSQSYI-TWMTWAQLEEDQGNSVRAEEIRNLYFQQRTEVVDD 357
+ ++ YI TW+ + + EE GN A I FQ+ E + +
Sbjct: 200 EKYILVHP--YIKTWIKYTKFEERLGNIENARTI----FQRAIEFLGE 241
Score = 135 (52.6 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 61/234 (26%), Positives = 103/234 (44%)
Query: 171 FERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLK--IGHA--VNPRDP-----VLLQS 221
+E ++ + KN W + E G I+K +++ + IG+ N + L +
Sbjct: 313 YEEEIKKNSKNYDIWFDYLKMEEINGEIEKTREIYERSIGNLPPTNEKKHWKRYIYLWIN 372
Query: 222 LALLEYKYST-ANLARKLFRRASEIDPRHQ----PVWIAWGWMEWKEGNLDTARELYERA 276
AL E S AR ++ ++ P + +WI + E ++ NLD AR +Y +A
Sbjct: 373 YALFEELISKDMERARSVYSECIKLIPHKEFSFSKIWILYANFEIRQLNLDKARLIYGQA 432
Query: 277 LSIDSTTESAARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGN 336
+ + ++ + + LE +GN R L+ L I + W +AQLE + G
Sbjct: 433 IGRNPKSKIFDQYIH----LEIELGNFDRVRTLYEKYLEIMPDNCDAWCKFAQLETELGE 488
Query: 337 SVRAEEIRNLYFQQRTEVVDDASWVMGFMD--IIDPALDRIKQLLN--LEKSSY 386
+VRA I L QQ + W F+D I D +KQL LEK+++
Sbjct: 489 TVRARAIFELAIQQPNLDRPEVVW-KDFIDSEIQLKQFDFVKQLYRKLLEKTNH 541
Score = 132 (51.5 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 68/306 (22%), Positives = 130/306 (42%)
Query: 2 KCIDYWPEDGRP---YVALGKVLSKQSKVAEARAIYAKG-SQATQGENPYIWQCWAVLEN 57
+ I++ EDG ++A K K ++ AR IY + ++ + E
Sbjct: 234 RAIEFLGEDGNDEQLFIAFAKFEEKYKEIERARVIYKYAIDHVPKSRAKDLFDTFTNFEK 293
Query: 58 KLGN--------IGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGL-K 108
+ G+ +GK R ++ + + W + +E G I+K R++ + +
Sbjct: 294 QHGDRIGIEDVVLGKKRFQYEEEIKKNSKNYDIWFDYLKMEEINGEIEKTREIYERSIGN 353
Query: 109 FCGGNE------YIYQTL--ALLEAKANR-YEQARNLFRQATKCNPKSCAS----WIAWS 155
NE YIY + AL E ++ E+AR+++ + K P S WI ++
Sbjct: 354 LPPTNEKKHWKRYIYLWINYALFEELISKDMERARSVYSECIKLIPHKEFSFSKIWILYA 413
Query: 156 QMEMQQENNLAARQLFERAVQASPKNR-FAWHVWGIFEANMGFIDKGKKLLKIGHAVNPR 214
E++Q N AR ++ +A+ +PK++ F ++ E +G D+ + L + + P
Sbjct: 414 NFEIRQLNLDKARLIYGQAIGRNPKSKIFDQYIH--LEIELGNFDRVRTLYEKYLEIMPD 471
Query: 215 DPVLLQSLALLEYKYSTANLARKLFRRASE---IDPRHQPVWIAWGWMEWKEGNLDTARE 271
+ A LE + AR +F A + +D R + VW + E + D ++
Sbjct: 472 NCDAWCKFAQLETELGETVRARAIFELAIQQPNLD-RPEVVWKDFIDSEIQLKQFDFVKQ 530
Query: 272 LYERAL 277
LY + L
Sbjct: 531 LYRKLL 536
Score = 130 (50.8 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 58/279 (20%), Positives = 123/279 (44%)
Query: 47 YIWQCWAVLENKLG-NIGKARELFDA--STVADK--GHIAAWHGWAVLELRQGNIKKARQ 101
Y+W +A+ E + ++ +AR ++ + K W +A E+RQ N+ KAR
Sbjct: 368 YLWINYALFEELISKDMERARSVYSECIKLIPHKEFSFSKIWILYANFEIRQLNLDKARL 427
Query: 102 LLAKGLKFCGGN--EYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEM 159
+ + + G N I+ LE + +++ R L+ + + P +C +W ++Q+E
Sbjct: 428 IYGQAI---GRNPKSKIFDQYIHLEIELGNFDRVRTLYEKYLEIMPDNCDAWCKFAQLET 484
Query: 160 QQENNLAARQLFERAVQASPKNRFAWHVWGIF---EANMGFIDKGKKLLKIGHAVNPRDP 216
+ + AR +FE A+Q +R VW F E + D K+L + + +
Sbjct: 485 ELGETVRARAIFELAIQQPNLDR-PEVVWKDFIDSEIQLKQFDFVKQLYR--KLLEKTNH 541
Query: 217 VLLQSLALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDT-ARELY-- 273
V + + +++ +S + ++ R+ + + G + +++ RE++
Sbjct: 542 VKVW-IGFIKFVHSIKDKQQQKQRQQQQEEDGDSNTTKKDGGDDDNNDDINKPTREIFIE 600
Query: 274 -ERALSIDSTTESAARCLQAWGVLEQRVGNLSAARRLFR 311
++LS +S E L++W EQ GN ++ +
Sbjct: 601 AHKSLS-NSDKEERLLLLESWKEFEQTFGNQETLNQVLK 638
Score = 122 (48.0 bits), Expect = 0.00044, P = 0.00044
Identities = 49/238 (20%), Positives = 101/238 (42%)
Query: 19 KVLSKQSKVAEARAIYAKGSQATQGEN---PYIWQCWAVLENKLGNIGKARELFDASTVA 75
+V++ Q ++ + R + ++ G N I+ +A E ++ +AR +F+
Sbjct: 45 QVITDQEELEDYRLRKRQQYESLLGRNRKTAAIYIKYAAWEESQKDLTRARSVFERFLDI 104
Query: 76 DKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARN 135
D W +A +E++ NI AR + + + ++ +E Y AR
Sbjct: 105 DHRIPTVWIKYAEMEMKNKNINLARNIWDRAVCLLPRVSQLWFKYTFMEDMLGNYPAARA 164
Query: 136 LFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVWGIFEANM 195
+F + + P+ A W ++ + E + + R +FE+ + P + W + FE +
Sbjct: 165 IFERWMQWKPEPQA-WNSYLKFEQRLKLFENTRLIFEKYILVHPYIK-TWIKYTKFEERL 222
Query: 196 GFIDKGKKLLK-----IGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDPR 248
G I+ + + + +G N D L + A E KY AR +++ A + P+
Sbjct: 223 GNIENARTIFQRAIEFLGEDGN--DEQLFIAFAKFEEKYKEIERARVIYKYAIDHVPK 278
>POMBASE|SPBC31F10.11c [details] [associations]
symbol:cwf4 "complexed with Cdc5 protein Cwf4"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=IDA]
[GO:0045292 "mRNA cis splicing, via spliceosome" evidence=IC]
InterPro:IPR003107 InterPro:IPR011990 InterPro:IPR013026
Pfam:PF02184 SMART:SM00386 PomBase:SPBC31F10.11c EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0007049
Gene3D:1.25.40.10 GO:GO:0045292 eggNOG:NOG327505 KO:K12869
HOGENOM:HOG000207972 OMA:KFTFAKI OrthoDB:EOG4NKG44 EMBL:AF254353
PIR:T40214 RefSeq:NP_596573.1 ProteinModelPortal:P87312
IntAct:P87312 STRING:P87312 EnsemblFungi:SPBC31F10.11c.1
GeneID:2540328 KEGG:spo:SPBC31F10.11c NextBio:20801457
Uniprot:P87312
Length = 674
Score = 172 (65.6 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 64/286 (22%), Positives = 122/286 (42%)
Query: 24 QSKVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARELFDASTVADKGHIAAW 83
Q + A AR+++ + P +W + E K NI AR LFD + W
Sbjct: 83 QKEFARARSVFERALDVDSTYIP-LWLKYIECEMKNRNINHARNLFDRAVTQLPRVDKLW 141
Query: 84 HGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKC 143
+ + +E GNI RQ+ + LK+ +E + + +E + + E+AR ++ +
Sbjct: 142 YKYVYMEEMLGNITGCRQVFERWLKW-EPDENCWMSYIRMERRYHENERARGIYERFVVV 200
Query: 144 NPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPK---NRFAWHVWGIFEANMGFIDK 200
+P+ +W+ W++ E + N RQ++ A+ A + N + + FE ++
Sbjct: 201 HPE-VTNWLRWARFEEECGNAANVRQVYLAAIDALGQEFLNERFFIAFAKFEIRQKEYER 259
Query: 201 GKKLLKIGHAVNPRDPV--LLQSLALLEYKY-------STANLARKL-FRRASEIDPRHQ 250
+ + K PR L + E ++ ST R+L + + + P
Sbjct: 260 ARTIFKYAIDFMPRSKSMELYKEYTHFEKQFGDHLGVESTVLDKRRLQYEKLLKDSPYDY 319
Query: 251 PVWIAWGWMEWKEGNLDTARELYERALS-IDSTTESAA--RCLQAW 293
W+ +E G+++T RE YE+A++ + E A R + W
Sbjct: 320 DTWLDLLKLEESAGDINTIRETYEKAIAKVPEVVEKNAWRRYVYIW 365
Score = 143 (55.4 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 49/193 (25%), Positives = 89/193 (46%)
Query: 155 SQMEMQQENNLAARQLFERAVQASPKNRFA---WHVWGIFEANMGFIDKGKKLLKIGHAV 211
+ +E QE R+ FE A++ +NR A W +G +E + + + + + V
Sbjct: 43 TDLEELQEFQGRKRKEFEDAIR---RNRLAMGHWMRYGQWELDQKEFARARSVFERALDV 99
Query: 212 NPRD-PVLLQSLALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTAR 270
+ P+ L+ + E K N AR LF RA PR +W + +ME GN+ R
Sbjct: 100 DSTYIPLWLKYIEC-EMKNRNINHARNLFDRAVTQLPRVDKLWYKYVYMEEMLGNITGCR 158
Query: 271 ELYERALSIDSTTESAARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQL 330
+++ER L E C ++ +E+R AR ++ + ++ + W+ WA+
Sbjct: 159 QVFERWLK----WEPDENCWMSYIRMERRYHENERARGIYERFVVVHPE-VTNWLRWARF 213
Query: 331 EEDQGNSVRAEEI 343
EE+ GN+ ++
Sbjct: 214 EEECGNAANVRQV 226
Score = 132 (51.5 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 69/311 (22%), Positives = 130/311 (41%)
Query: 63 GKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLAL 122
G+ R+ F+ + ++ + W + EL Q +AR + + L + YI L
Sbjct: 53 GRKRKEFEDAIRRNRLAMGHWMRYGQWELDQKEFARARSVFERALDV--DSTYIPLWLKY 110
Query: 123 LEAKA-NR-YEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPK 180
+E + NR ARNLF +A P+ W + ME N RQ+FER ++ P
Sbjct: 111 IECEMKNRNINHARNLFDRAVTQLPRVDKLWYKYVYMEEMLGNITGCRQVFERWLKWEPD 170
Query: 181 NRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFR 240
W + E ++ + + + V+P L+ E + AN+ R+++
Sbjct: 171 EN-CWMSYIRMERRYHENERARGIYERFVVVHPEVTNWLRWARFEEECGNAANV-RQVYL 228
Query: 241 RASEI---DPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLE 297
A + + ++ +IA+ E ++ + AR +++ A+ ++S + + E
Sbjct: 229 AAIDALGQEFLNERFFIAFAKFEIRQKEYERARTIFKYAIDFMPRSKSM-ELYKEYTHFE 287
Query: 298 QRVGN-LSAA------RRL-FRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEIRNLYFQ 349
++ G+ L RRL + L + Y TW+ +LEE G+ E
Sbjct: 288 KQFGDHLGVESTVLDKRRLQYEKLLKDSPYDYDTWLDLLKLEESAGDINTIRETYEKAIA 347
Query: 350 QRTEVVDDASW 360
+ EVV+ +W
Sbjct: 348 KVPEVVEKNAW 358
Score = 128 (50.1 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 45/204 (22%), Positives = 82/204 (40%)
Query: 49 WQCWAVLENKLGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLK 108
W + E +AR +F+ + D +I W + E++ NI AR L + +
Sbjct: 73 WMRYGQWELDQKEFARARSVFERALDVDSTYIPLWLKYIECEMKNRNINHARNLFDRAVT 132
Query: 109 FCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNP-KSCASWIAWSQMEMQQENNLAA 167
+ ++ +E R +F + K P ++C W+++ +ME + N A
Sbjct: 133 QLPRVDKLWYKYVYMEEMLGNITGCRQVFERWLKWEPDENC--WMSYIRMERRYHENERA 190
Query: 168 RQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKL-LKIGHAVNPR--DPVLLQSLAL 224
R ++ER V P+ W W FE G +++ L A+ + + A
Sbjct: 191 RGIYERFVVVHPEVT-NWLRWARFEEECGNAANVRQVYLAAIDALGQEFLNERFFIAFAK 249
Query: 225 LEYKYSTANLARKLFRRASEIDPR 248
E + AR +F+ A + PR
Sbjct: 250 FEIRQKEYERARTIFKYAIDFMPR 273
Score = 123 (48.4 bits), Expect = 0.00032, P = 0.00032
Identities = 33/134 (24%), Positives = 69/134 (51%)
Query: 47 YIWQCWAVLEN-KLGNIGKARELFDAST--VADKGHIAA--WHGWAVLELRQGNIKKARQ 101
YIW + + E + ++ +AR+++ + + K A W +A+ ELRQ I AR+
Sbjct: 363 YIWLNYCLFEEIDVKDVDRARKVYQEALKLIPHKKFTFAKLWLMYAMFELRQRKIDVARK 422
Query: 102 LLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQ 161
L + L C + +++ E ++++ R L+ + +P++CA W+ ++ +E +
Sbjct: 423 TLGRALGMCPKPK-LFRGYIEFEDAIKQFDRCRILYEKWILYDPEACAPWLGYAALETKL 481
Query: 162 ENNLAARQLFERAV 175
++ AR L+ AV
Sbjct: 482 GDSDRARALYNLAV 495
Score = 93 (37.8 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 28/130 (21%), Positives = 56/130 (43%)
Query: 235 ARKLFRRASEIDPRHQ----PVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCL 290
ARK+++ A ++ P + +W+ + E ++ +D AR+ RAL + +
Sbjct: 382 ARKVYQEALKLIPHKKFTFAKLWLMYAMFELRQRKIDVARKTLGRALGMCPKP----KLF 437
Query: 291 QAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEIRNLYFQQ 350
+ + E + R L+ + + ++ W+ +A LE G+S RA + NL Q
Sbjct: 438 RGYIEFEDAIKQFDRCRILYEKWILYDPEACAPWLGYAALETKLGDSDRARALYNLAVNQ 497
Query: 351 RTEVVDDASW 360
+ W
Sbjct: 498 PILETPELVW 507
>SGD|S000004107 [details] [associations]
symbol:CLF1 "Member of the NineTeen Complex (NTC)"
species:4932 "Saccharomyces cerevisiae" [GO:0000785 "chromatin"
evidence=IDA] [GO:0000384 "first spliceosomal transesterification
activity" evidence=IC] [GO:0071007 "U2-type catalytic step 2
spliceosome" evidence=IDA] [GO:0071004 "U2-type prespliceosome"
evidence=IDA] [GO:0071008 "U2-type post-mRNA release spliceosomal
complex" evidence=IDA] [GO:0000974 "Prp19 complex" evidence=IDA]
[GO:0071006 "U2-type catalytic step 1 spliceosome" evidence=IDA]
[GO:0000354 "cis assembly of pre-catalytic spliceosome"
evidence=IMP;IPI] [GO:0005622 "intracellular" evidence=IEA]
[GO:0006396 "RNA processing" evidence=IEA] [GO:0006270 "DNA
replication initiation" evidence=IMP;IPI] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0003688 "DNA replication
origin binding" evidence=IDA] [GO:0000386 "second spliceosomal
transesterification activity" evidence=IC] InterPro:IPR003107
InterPro:IPR011990 InterPro:IPR013026 Pfam:PF02184 SMART:SM00386
SGD:S000004107 GO:GO:0000785 GO:GO:0003682 EMBL:BK006945
GO:GO:0003688 GO:GO:0007049 GO:GO:0006270 Gene3D:1.25.40.10
EMBL:X89514 EMBL:U53877 GO:GO:0000974 GO:GO:0071006
eggNOG:NOG327505 KO:K12869 HOGENOM:HOG000207972 OMA:KFTFAKI
OrthoDB:EOG4NKG44 EMBL:Z73289 PIR:S64954 RefSeq:NP_013218.1
ProteinModelPortal:Q12309 SMR:Q12309 DIP:DIP-1685N IntAct:Q12309
MINT:MINT-385873 STRING:Q12309 PaxDb:Q12309 PRIDE:Q12309
EnsemblFungi:YLR117C GeneID:850808 KEGG:sce:YLR117C CYGD:YLR117c
GeneTree:ENSGT00550000074931 NextBio:967040 Genevestigator:Q12309
GermOnline:YLR117C GO:GO:0071007 GO:GO:0071008 GO:GO:0071004
GO:GO:0000354 Uniprot:Q12309
Length = 687
Score = 153 (58.9 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 47/190 (24%), Positives = 83/190 (43%)
Query: 151 WIAW-SQMEMQQENNLAARQLFERAVQ-ASPKNRFA----WHVWGIFEANMGFIDKGKKL 204
W+ + +E++ EN+L +LF+R + P F W ++ F + K +K+
Sbjct: 367 WMRYICYVELELENSLLEEELFQRLIDDIIPHKHFTFSKIWLMYAKFLIRHDDVPKARKI 426
Query: 205 LKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEG 264
L + P+ + LE K + RK++ + E P +W +G +E G
Sbjct: 427 LGKAIGLCPKAKTF-KGYIELEVKLKEFDRVRKIYEKFIEFQPSDLQIWSQYGELEENLG 485
Query: 265 NLDTARELYERALSIDS---TTESAARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSY 321
+ D R +Y AL +S T E+ LQ + E AR+L+R L +N S
Sbjct: 486 DWDRVRGIYTIALDENSDFLTKEAKIVLLQKYITFETESQEFEKARKLYRRYLELNQYSP 545
Query: 322 ITWMTWAQLE 331
+W+ +A +
Sbjct: 546 QSWIEFAMYQ 555
Score = 133 (51.9 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 37/163 (22%), Positives = 74/163 (45%)
Query: 34 YAKGSQATQGENPYIWQCWAVLENKLGNIGKARELFDASTVADKGHIAAWHGWAVLELRQ 93
Y K ++ G+ W +A E + ++ +AR +F+ + + D I W + EL+
Sbjct: 57 YLKRNRLDMGQ----WIRYAQFEIEQHDMRRARSIFERALLVDSSFIPLWIRYIDAELKV 112
Query: 94 GNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIA 153
I AR L+ + + + ++ ++E N E R+L+ + P +W +
Sbjct: 113 KCINHARNLMNRAISTLPRVDKLWYKYLIVEESLNNVEIVRSLYTKWCSLEP-GVNAWNS 171
Query: 154 WSQMEMQQENNLAARQLFERAVQASPKNRFAWHVWGIFEANMG 196
+ E++Q+N R+++ + V A P+ + W W FE G
Sbjct: 172 FVDFEIRQKNWNGVREIYSKYVMAHPQMQ-TWLKWVRFENRHG 213
Score = 124 (48.7 bits), Expect = 0.00025, P = 0.00025
Identities = 50/233 (21%), Positives = 95/233 (40%)
Query: 100 RQLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEM 159
R + KG K G L L E + + + R + K N WI ++Q E+
Sbjct: 20 RDVYKKGQKARGSTNI--DILDLEELREYQ-RRKRTEYEGYLKRNRLDMGQWIRYAQFEI 76
Query: 160 QQENNLAARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLL 219
+Q + AR +FERA+ W + E + I+ + L+ + PR L
Sbjct: 77 EQHDMRRARSIFERALLVDSSFIPLWIRYIDAELKVKCINHARNLMNRAISTLPRVDKLW 136
Query: 220 QSLALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSI 279
++E + + R L+ + ++P W ++ E ++ N + RE+Y + +
Sbjct: 137 YKYLIVEESLNNVEIVRSLYTKWCSLEPGVN-AWNSFVDFEIRQKNWNGVREIYSKYVMA 195
Query: 280 DSTTESAARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYI-TWMTWAQLE 331
++ + W E R GN R ++ SL I++ + + W+ +E
Sbjct: 196 HPQMQTWLK----WVRFENRHGNTEFTRSVY--SLAIDTVANLQNLQIWSDME 242
Score = 74 (31.1 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 30/183 (16%), Positives = 77/183 (42%)
Query: 219 LQSLALLEYKYSTANLARKLFRRA-SEIDP-RH---QPVWIAWGWMEWKEGNLDTARELY 273
++ + +E + + L +LF+R +I P +H +W+ + + ++ AR++
Sbjct: 368 MRYICYVELELENSLLEEELFQRLIDDIIPHKHFTFSKIWLMYAKFLIRHDDVPKARKIL 427
Query: 274 ERALSIDSTTESAARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEED 333
+A+ + A+ + + LE ++ R+++ + W + +LEE+
Sbjct: 428 GKAIGLCPK----AKTFKGYIELEVKLKEFDRVRKIYEKFIEFQPSDLQIWSQYGELEEN 483
Query: 334 QGNSVRAEEIRNLYFQQRTEVVDDASWVMGFMDII--DPALDRIKQLLNLEKSSYKEPSA 391
G+ R I + + ++ + + ++ I + ++ L + Y E +
Sbjct: 484 LGDWDRVRGIYTIALDENSDFLTKEAKIVLLQKYITFETESQEFEKARKLYRR-YLELNQ 542
Query: 392 YSP 394
YSP
Sbjct: 543 YSP 545
Score = 64 (27.6 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 19/78 (24%), Positives = 30/78 (38%)
Query: 25 SKVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARELFDASTVADKGHIAAWH 84
+ V R++Y K G N W + E + N RE++ +A + W
Sbjct: 147 NNVEIVRSLYTKWCSLEPGVNA--WNSFVDFEIRQKNWNGVREIYSKYVMAHP-QMQTWL 203
Query: 85 GWAVLELRQGNIKKARQL 102
W E R GN + R +
Sbjct: 204 KWVRFENRHGNTEFTRSV 221
Score = 56 (24.8 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 18/63 (28%), Positives = 27/63 (42%)
Query: 31 RAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARELFDAS--TVADKGHIAAWHGWAV 88
R IY+K A W W EN+ GN R ++ + TVA+ ++ W V
Sbjct: 186 REIYSKYVMAHP--QMQTWLKWVRFENRHGNTEFTRSVYSLAIDTVANLQNLQIWSDMEV 243
Query: 89 LEL 91
+L
Sbjct: 244 AKL 246
>POMBASE|SPBC6B1.07 [details] [associations]
symbol:prp1 "U4/U6 x U5 tri-snRNP complex subunit Prp1"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0045292 "mRNA cis splicing, via spliceosome"
evidence=IMP] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=ISO] InterPro:IPR003107 InterPro:IPR010491
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF06424 SMART:SM00028 SMART:SM00386 PomBase:SPBC6B1.07
EMBL:CU329671 GenomeReviews:CU329671_GR eggNOG:COG0457
Gene3D:1.25.40.10 GO:GO:0046540 GO:GO:0045292 EMBL:D83659
EMBL:D83743 PIR:T45158 RefSeq:NP_596086.1 ProteinModelPortal:Q12381
IntAct:Q12381 STRING:Q12381 EnsemblFungi:SPBC6B1.07.1
GeneID:2541185 KEGG:spo:SPBC6B1.07 HOGENOM:HOG000116247 KO:K12855
OMA:IWLRAAY OrthoDB:EOG4D82F8 NextBio:20802297 InterPro:IPR027108
PANTHER:PTHR11246:SF1 Uniprot:Q12381
Length = 906
Score = 172 (65.6 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 76/325 (23%), Positives = 140/325 (43%)
Query: 14 YVALGKVLSKQSKVAEARAIYAKGSQATQGENPYIWQCWAVLE---NKLGNIGKARELFD 70
+V +G K + A+A S +T Y+ +++ N LG+I KAR+L
Sbjct: 209 FVEIGAARDKVLGIKLAQASSNLTSPSTIDPKGYLTSLNSMVPKNANDLGDIRKARKLLQ 268
Query: 71 ASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKANRY 130
+ + H + W A LE + +A+ L+ KG + C +E ++ L A
Sbjct: 269 SVIETNPKHASGWVAAARLEEVANKLSQAQSLILKGCENCSRSEDVWLEAIRLHPAA--- 325
Query: 131 EQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVWGI 190
+A+ + A K PKS W+ ++E Q ++ +++ ++A++ +P + W
Sbjct: 326 -EAKVIIANAVKKLPKSVTLWLEAEKLENQAQHK---KRIIKKALEFNPTSVSLWKEAVN 381
Query: 191 FEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASE-IDPRH 249
E +D + LL + P L +LA LE T A+K+ +A + I H
Sbjct: 382 LEEE---VDNARILLARAVELIPMSIDLWLALARLE----TYENAKKVLNKARQTIRTSH 434
Query: 250 QPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLE--QRVGNLSAAR 307
+ VWIA +E ++GN+ ++ R +S T + Q E + G + A+
Sbjct: 435 E-VWIAAARLEEQQGNVSRVEKIMARGVSELQATGGMLQRDQWLSEAEKCETEGAVITAQ 493
Query: 308 RLFRSSLNIN---SQSYITWMTWAQ 329
+ + L + + TW+ AQ
Sbjct: 494 AIINTCLGVGLDEEDQFDTWLDDAQ 518
Score = 161 (61.7 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 54/208 (25%), Positives = 93/208 (44%)
Query: 7 WPEDGRPYVALGKVLSKQSKVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKAR 66
+P + Y+ G++ + ++ AR Y G++ P +W A LE K I +AR
Sbjct: 675 YPHYDKLYMMKGQIFEDKEQIELARDAYLAGTKVCPYSIP-LWLLLAKLEEKQSVI-RAR 732
Query: 67 ELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAK 126
+FD + V + + W +ELR GNI + R LAK L+ C + ++ LE +
Sbjct: 733 VVFDRAKVKNPKNEFLWLELIKMELRAGNISQVRAALAKALQECPSSGLLWTEAIWLEPR 792
Query: 127 ANRYEQARNLFRQATKCNPKSCA-SWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAW 185
A R +A + R+ C + + W +E + + AR F +AV+A N W
Sbjct: 793 AQRKTRATDALRKCEGNAHLLCTIARMLW--LEKKADK---ARSWFLKAVKADQDNGDVW 847
Query: 186 HVWGIFEANMGFIDKGKKLLKIGHAVNP 213
+ + G D+ K++L +P
Sbjct: 848 CWFYKYSLEAGNEDQQKEVLTSFETADP 875
Score = 148 (57.2 bits), Expect = 8.9e-07, P = 8.9e-07
Identities = 81/337 (24%), Positives = 134/337 (39%)
Query: 5 DYWPEDGRPYVALGKVLSKQSKVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGK 64
D W +D + ++A + + ARA++A S ++ +W LE G
Sbjct: 511 DTWLDDAQSFIA-------RKCIDCARAVFAF-SLRVYPKSEKLWLRAVELEKLYGTTES 562
Query: 65 ARELFDASTVA-DKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALL 123
+ + + + K I W +A +I AR +L + ++ +E I+ +
Sbjct: 563 VCSILEKAVESCPKAEIL-WLLYAKERKNVNDIAGARNILGRAFEYNSNSEEIWLAAVRI 621
Query: 124 EAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRF 183
E N E+AR L +A + + W +E + A QL E A++ P
Sbjct: 622 EFVNNENERARKLLARA-RIESGTERIWTKSISLERILDEKDRALQLLENALKIYPHYDK 680
Query: 184 AWHVWG-IFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRA 242
+ + G IFE + I+ + G V P L LA LE K S AR +F RA
Sbjct: 681 LYMMKGQIFE-DKEQIELARDAYLAGTKVCPYSIPLWLLLAKLEEKQSVIR-ARVVFDRA 738
Query: 243 SEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQA-WGVLEQRVG 301
+P+++ +W+ ME + GN+ R +AL S +A W LE R
Sbjct: 739 KVKNPKNEFLWLELIKMELRAGNISQVRAALAKALQ--ECPSSGLLWTEAIW--LEPRAQ 794
Query: 302 NLSAARRLFRSSL-NINSQSYITWMTWAQLEEDQGNS 337
+ A R N + I M W + + D+ S
Sbjct: 795 RKTRATDALRKCEGNAHLLCTIARMLWLEKKADKARS 831
Score = 143 (55.4 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 63/261 (24%), Positives = 102/261 (39%)
Query: 83 WHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATK 142
W LE G + +L K ++ C E ++ A N ARN+ +A +
Sbjct: 547 WLRAVELEKLYGTTESVCSILEKAVESCPKAEILWLLYAKERKNVNDIAGARNILGRAFE 606
Query: 143 CNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGK 202
N S W+A ++E N AR+L RA S R W E + D+
Sbjct: 607 YNSNSEEIWLAAVRIEFVNNENERARKLLARARIESGTERI-WTKSISLERILDEKDRAL 665
Query: 203 KLLKIGHAVNPR-DPVLLQSLALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEW 261
+LL+ + P D + + + E K LAR + +++ P P+W+ +E
Sbjct: 666 QLLENALKIYPHYDKLYMMKGQIFEDK-EQIELARDAYLAGTKVCPYSIPLWLLLAKLEE 724
Query: 262 KEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSY 321
K+ + AR +++RA + E L +E R GN+S R +L S
Sbjct: 725 KQSVI-RARVVFDRAKVKNPKNEFLWLELIK---MELRAGNISQVRAALAKALQECPSSG 780
Query: 322 ITWMTWAQLEEDQGNSVRAEE 342
+ W LE RA +
Sbjct: 781 LLWTEAIWLEPRAQRKTRATD 801
Score = 138 (53.6 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 64/279 (22%), Positives = 106/279 (37%)
Query: 2 KCIDYWPEDGRPYVALGKVLSKQSKVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGN 61
K ++ P+ ++ K + +A AR I + + IW +E
Sbjct: 569 KAVESCPKAEILWLLYAKERKNVNDIAGARNILGRAFEYNSNSEE-IWLAAVRIEFVNNE 627
Query: 62 IGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLA 121
+AR+L + + + G W LE +A QLL LK + +Y
Sbjct: 628 NERARKLLARARI-ESGTERIWTKSISLERILDEKDRALQLLENALKIYPHYDKLYMMKG 686
Query: 122 LLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKN 181
+ + E AR+ + TK P S W+ +++E ++++ + AR +F+RA +PKN
Sbjct: 687 QIFEDKEQIELARDAYLAGTKVCPYSIPLWLLLAKLE-EKQSVIRARVVFDRAKVKNPKN 745
Query: 182 RFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRR 241
F W E G I + + L P +L LE + A R+
Sbjct: 746 EFLWLELIKMELRAGNISQVRAALAKALQECPSSGLLWTEAIWLEPRAQRKTRATDALRK 805
Query: 242 ASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSID 280
H IA M W E D AR + +A+ D
Sbjct: 806 CE--GNAHLLCTIAR--MLWLEKKADKARSWFLKAVKAD 840
Score = 124 (48.7 bits), Expect = 0.00036, P = 0.00036
Identities = 70/338 (20%), Positives = 135/338 (39%)
Query: 15 VALGKVLSKQSKVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARELF--DAS 72
+ L L++ A+ + K Q + + +W A LE + GN+ + ++ S
Sbjct: 404 IDLWLALARLETYENAKKVLNKARQTIRTSHE-VWIAAARLEEQQGNVSRVEKIMARGVS 462
Query: 73 TVADKGHIAAWHGW-AVLEL--RQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAK--- 126
+ G + W + E +G + A+ ++ L E + T L +A+
Sbjct: 463 ELQATGGMLQRDQWLSEAEKCETEGAVITAQAIINTCLGVGLDEEDQFDTW-LDDAQSFI 521
Query: 127 ANR-YEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAW 185
A + + AR +F + + PKS W+ ++E + + E+AV++ PK W
Sbjct: 522 ARKCIDCARAVFAFSLRVYPKSEKLWLRAVELEKLYGTTESVCSILEKAVESCPKAEILW 581
Query: 186 HVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEI 245
++ N+ I + +L N + + +E+ + ARKL RA I
Sbjct: 582 LLYAKERKNVNDIAGARNILGRAFEYNSNSEEIWLAAVRIEFVNNENERARKLLARA-RI 640
Query: 246 DPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQRVGNLSA 305
+ + +W +E D A +L E AL I + + + E + +
Sbjct: 641 ESGTERIWTKSISLERILDEKDRALQLLENALKIYPHYDKLY--MMKGQIFEDKE-QIEL 697
Query: 306 ARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEI 343
AR + + + S W+ A+LEE Q + +RA +
Sbjct: 698 ARDAYLAGTKVCPYSIPLWLLLAKLEEKQ-SVIRARVV 734
>UNIPROTKB|O94906 [details] [associations]
symbol:PRPF6 "Pre-mRNA-processing factor 6" species:9606
"Homo sapiens" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=NAS] [GO:0000375 "RNA
splicing, via transesterification reactions" evidence=NAS]
[GO:0000245 "spliceosomal complex assembly" evidence=NAS]
[GO:0008380 "RNA splicing" evidence=NAS;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;TAS] [GO:0003713 "transcription
coactivator activity" evidence=IGI] [GO:0003723 "RNA binding"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006403 "RNA
localization" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0050681 "androgen receptor binding" evidence=IPI] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0043021 "ribonucleoprotein complex binding" evidence=IDA]
[GO:0005682 "U5 snRNP" evidence=IDA] [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=IDA] [GO:0071001 "U4/U6 snRNP"
evidence=IDA] [GO:0000244 "assembly of spliceosomal tri-snRNP"
evidence=IC;IMP] Reactome:REACT_71 InterPro:IPR003107
InterPro:IPR010491 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF06424 Pfam:PF13181 SMART:SM00386
GO:GO:0005654 GO:GO:0016607 Reactome:REACT_1675 GO:GO:0045944
GO:GO:0005682 GO:GO:0000244 GO:GO:0003723 Orphanet:791
EMBL:AL118506 GO:GO:0003713 eggNOG:COG0457 Gene3D:1.25.40.10
GO:GO:0043021 GO:GO:0071013 GO:GO:0000245 GO:GO:0046540
GO:GO:0006403 ChiTaRS:PRPF6 GO:GO:0071001 KO:K12855 OMA:IWLRAAY
InterPro:IPR027108 PANTHER:PTHR11246:SF1 CTD:24148
HOVERGEN:HBG023330 OrthoDB:EOG4FTVZW EMBL:AB019219 EMBL:AF221842
EMBL:AF026031 EMBL:AK001554 EMBL:AK314310 EMBL:AL356790
EMBL:AL355803 EMBL:BC001666 EMBL:AL137320 IPI:IPI00305068
PIR:T46386 RefSeq:NP_036601.2 UniGene:Hs.31334
ProteinModelPortal:O94906 SMR:O94906 DIP:DIP-29006N IntAct:O94906
MINT:MINT-260551 STRING:O94906 PhosphoSite:O94906 PaxDb:O94906
PeptideAtlas:O94906 PRIDE:O94906 Ensembl:ENST00000266079
Ensembl:ENST00000535781 GeneID:24148 KEGG:hsa:24148 UCSC:uc002yho.3
GeneCards:GC20P062612 HGNC:HGNC:15860 HPA:HPA047106 MIM:613979
MIM:613983 neXtProt:NX_O94906 PharmGKB:PA25682 InParanoid:O94906
PhylomeDB:O94906 GenomeRNAi:24148 NextBio:46847 Bgee:O94906
CleanEx:HS_PRPF6 Genevestigator:O94906 GermOnline:ENSG00000101161
Uniprot:O94906
Length = 941
Score = 169 (64.5 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 67/299 (22%), Positives = 119/299 (39%)
Query: 48 IWQCWAVLENKLGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGL 107
+W A + G++ AR + + A+ W LE ++AR+LLAK
Sbjct: 610 LWLMGAKSKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENDEYERARRLLAKA- 668
Query: 108 KFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAA 167
+ ++ LE + A++L +A + W+ Q+E Q+E A
Sbjct: 669 RSSAPTARVFMKSVKLEWVQDNIRAAQDLCEEALRHYEDFPKLWMMKGQIEEQKEMMEKA 728
Query: 168 RQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEY 227
R+ + + ++ P + W + E +G + + + +L+ NP++P L LEY
Sbjct: 729 REAYNQGLKKCPHSTPLWLLLSRLEEKIGQLTRARAILEKSRLKNPKNPGLWLESVRLEY 788
Query: 228 KYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTT--ES 285
+ N+A L +A + P G + W E AR R S+D+ E
Sbjct: 789 RAGLKNIANTLMAKALQECPNS-------GIL-WSEAIFLEARP-QRRTKSVDALKKCEH 839
Query: 286 AARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEIR 344
L A L ++ AR F ++ I+S W + + E G + EE+R
Sbjct: 840 DPHVLLAVAKLFWSQRKITKAREWFHRTVKIDSDLGDAWAFFYKFELQHGTEEQQEEVR 898
Score = 151 (58.2 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 62/273 (22%), Positives = 112/273 (41%)
Query: 8 PEDGRPYVALGKVLSKQSKVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARE 67
P ++A K+ S+ + AR + AK + ++ LE NI A++
Sbjct: 639 PNSEEIWLAAVKLESENDEYERARRLLAKARSSAPTARVFMKS--VKLEWVQDNIRAAQD 696
Query: 68 LFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKA 127
L + + + W +E ++ ++KAR+ +GLK C + ++ L+ LE K
Sbjct: 697 LCEEALRHYEDFPKLWMMKGQIEEQKEMMEKAREAYNQGLKKCPHSTPLWLLLSRLEEKI 756
Query: 128 NRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHV 187
+ +AR + ++ NPK+ W+ ++E + A L +A+Q P + W
Sbjct: 757 GQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNIANTLMAKALQECPNSGILWSE 816
Query: 188 WGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDP 247
EA K LK DP +L ++A L + AR+ F R +ID
Sbjct: 817 AIFLEARPQRRTKSVDALKKCE----HDPHVLLAVAKLFWSQRKITKAREWFHRTVKIDS 872
Query: 248 RHQPVWIAWGWMEWKEGNLDTARELYERALSID 280
W + E + G + E+ +R S +
Sbjct: 873 DLGDAWAFFYKFELQHGTEEQQEEVRKRCESAE 905
Score = 147 (56.8 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 50/216 (23%), Positives = 86/216 (39%)
Query: 128 NRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHV 187
N E AR ++ A + P + W+ + E + L +RAV PK W +
Sbjct: 554 NALECARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVLWLM 613
Query: 188 WGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDP 247
+ G + + +L + NP + + LE + AR+L +A P
Sbjct: 614 GAKSKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENDEYERARRLLAKARSSAP 673
Query: 248 RHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQRVGNLSAAR 307
+ V++ +EW + N+ A++L E AL E + G +E++ + AR
Sbjct: 674 TAR-VFMKSVKLEWVQDNIRAAQDLCEEALR---HYEDFPKLWMMKGQIEEQKEMMEKAR 729
Query: 308 RLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEI 343
+ L S W+ ++LEE G RA I
Sbjct: 730 EAYNQGLKKCPHSTPLWLLLSRLEEKIGQLTRARAI 765
Score = 144 (55.7 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 65/277 (23%), Positives = 121/277 (43%)
Query: 59 LGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQ 118
+ +I KAR L + + H AW A LE G ++ AR L+ KG + C +E ++
Sbjct: 288 INDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWL 347
Query: 119 TLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQAS 178
A L+ + A+ + QA + P+S +I +++E A +++ +A++
Sbjct: 348 EAARLQPG----DTAKAVVAQAVRHLPQSVRIYIRAAELETDIR---AKKRVLRKALEHV 400
Query: 179 PKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVN--PRDPVLLQSLALLEYKYSTANLAR 236
P + W +A + + + + AV P L +LA LE T AR
Sbjct: 401 PNSVRLW------KAAVELEEPEDARIMLSRAVECCPTSVELWLALARLE----TYENAR 450
Query: 237 KLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERAL-SIDSTTESAARCLQAW-G 294
K+ +A E P + +WI +E GN ++ +RA+ S+ + R + W
Sbjct: 451 KVLNKARENIPTDRHIWITAAKLEEANGNTQMVEKIIDRAITSLRANGVEINR--EQWIQ 508
Query: 295 VLEQ--RVGNLSAARRLFRSSLNINSQSYITWMTWAQ 329
E+ R G+++ + + R+ + I + TW +
Sbjct: 509 DAEECDRAGSVATCQAVMRAVIGIGIEEEDRKHTWME 545
Score = 125 (49.1 bits), Expect = 0.00030, P = 0.00030
Identities = 56/230 (24%), Positives = 94/230 (40%)
Query: 167 ARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLE 226
AR ++ A+Q P + W FE N G + + LL+ A P+ VL A +
Sbjct: 559 ARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVLWLMGAKSK 618
Query: 227 YKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESA 286
+ AR + A + +P + +W+A +E + + AR L +A S T
Sbjct: 619 WLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENDEYERARRLLAKARSSAPT---- 674
Query: 287 ARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEIRNL 346
AR LE N+ AA+ L +L WM Q+EE + +A E N
Sbjct: 675 ARVFMKSVKLEWVQDNIRAAQDLCEEALRHYEDFPKLWMMKGQIEEQKEMMEKAREAYNQ 734
Query: 347 YFQQRTEVVDDASWVMGFMDIIDPALDRIKQLLN-LEKSSYKEPSAYSPG 395
++ W++ + ++ + ++ + LEKS K P +PG
Sbjct: 735 GLKKCPH--STPLWLL--LSRLEEKIGQLTRARAILEKSRLKNPK--NPG 778
>TAIR|locus:2080853 [details] [associations]
symbol:AT3G51110 species:3702 "Arabidopsis thaliana"
[GO:0005622 "intracellular" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006396 "RNA processing" evidence=IEA;ISS]
InterPro:IPR003107 InterPro:IPR011990 InterPro:IPR013026
Pfam:PF02184 PROSITE:PS50293 SMART:SM00386 EMBL:CP002686
GO:GO:0005622 GO:GO:0006396 Gene3D:1.25.40.10 IPI:IPI00546615
RefSeq:NP_566944.1 UniGene:At.857 ProteinModelPortal:F4J390
SMR:F4J390 EnsemblPlants:AT3G51110.1 GeneID:824275
KEGG:ath:AT3G51110 OMA:ERSHTIF Uniprot:F4J390
Length = 413
Score = 163 (62.4 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 55/263 (20%), Positives = 120/263 (45%)
Query: 30 ARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARELFDASTVADKGHIAAWHGWAVL 89
AR+++ + + N +W +A E + ++ AR ++D + W+ + +
Sbjct: 90 ARSVWERALEDESYRNHTLWLKYAEFEMRNKSVNHARNVWDRAVKILPRVDQFWYKYIHM 149
Query: 90 ELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCA 149
E GNI AR++ + + + ++ + E + N E++R+++ + C+PK+ +
Sbjct: 150 EEILGNIDGARKIFERWMDW-SPDQQAWLCFIKFELRYNEIERSRSIYERFVLCHPKA-S 207
Query: 150 SWIAWSQMEMQQENNLAARQLFERAVQ----ASPKNRFAWHVWGIFEANMGFIDKGKKLL 205
S+I +++ EM+ AR ++ERA++ + + + FE +++ + L
Sbjct: 208 SFIRYAKFEMKNSQVSLARIVYERAIEMLKDVEEEAEMIFVAFAEFEELCKEVERARFLY 267
Query: 206 K--IGHAVNPRDPVLLQSLALLEYKYST------ANLARKLFRRASEI--DPRHQPVWIA 255
K + H R L + E +Y A + R+ + E+ +P + W
Sbjct: 268 KYALDHIPKGRAEDLYKKFVAFEKQYGNKEGIDDAIVGRRKLQYEGEVRKNPLNYDSWFD 327
Query: 256 WGWMEWKEGNLDTARELYERALS 278
+ +E G+ D RE+YERA++
Sbjct: 328 YISLEETLGDKDRIREVYERAIA 350
Score = 144 (55.7 bits), Expect = 7.4e-07, P = 7.4e-07
Identities = 45/205 (21%), Positives = 96/205 (46%)
Query: 113 NEYIYQTLALLEAKANRYEQARNLFRQATKCNP-KSCASWIAWSQMEMQQENNLAARQLF 171
N ++ A E +++AR+++ +A + ++ W+ +++ EM+ ++ AR ++
Sbjct: 70 NSQVWVRYADWEESQKDHDRARSVWERALEDESYRNHTLWLKYAEFEMRNKSVNHARNVW 129
Query: 172 ERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYST 231
+RAV+ P+ W+ + E +G ID +K+ + +P L + E +Y+
Sbjct: 130 DRAVKILPRVDQFWYKYIHMEEILGNIDGARKIFERWMDWSPDQQAWLCFIKF-ELRYNE 188
Query: 232 ANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALS-IDSTTESAARCL 290
+R ++ R P+ +I + E K + AR +YERA+ + E A
Sbjct: 189 IERSRSIYERFVLCHPKASS-FIRYAKFEMKNSQVSLARIVYERAIEMLKDVEEEAEMIF 247
Query: 291 QAWGVLEQRVGNLSAARRLFRSSLN 315
A+ E+ + AR L++ +L+
Sbjct: 248 VAFAEFEELCKEVERARFLYKYALD 272
Score = 117 (46.2 bits), Expect = 0.00071, P = 0.00071
Identities = 69/322 (21%), Positives = 139/322 (43%)
Query: 162 ENNLAARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIG-HAVNPRDPVLLQ 220
E L R+ FE ++ + N W + +E + D+ + + + + R+ L
Sbjct: 51 EYRLRRRKEFEDQIRGAKTNSQVWVRYADWEESQKDHDRARSVWERALEDESYRNHTLWL 110
Query: 221 SLALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSID 280
A E + + N AR ++ RA +I PR W + ME GN+D AR+++ER +
Sbjct: 111 KYAEFEMRNKSVNHARNVWDRAVKILPRVDQFWYKYIHMEEILGNIDGARKIFERWMDW- 169
Query: 281 STTESAARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRA 340
S + A C + E R + +R ++ + + ++ +++ +A+ E A
Sbjct: 170 SPDQQAWLCFIKF---ELRYNEIERSRSIYERFVLCHPKAS-SFIRYAKFEMKNSQVSLA 225
Query: 341 EEIRNLYFQQRTEVVDDASWV-MGFMDIID--PALDRIKQLL-----NLEKSS----YKE 388
+ + +V ++A + + F + + ++R + L ++ K YK+
Sbjct: 226 RIVYERAIEMLKDVEEEAEMIFVAFAEFEELCKEVERARFLYKYALDHIPKGRAEDLYKK 285
Query: 389 PSAYSP--GDNESTDDEASVSRYSGLYVGNDLESASGFDL-DDFIRNKLNL-DPDQLDVL 444
A+ G+ E DD A V R Y G ++ +D D+I + L D D++ +
Sbjct: 286 FVAFEKQYGNKEGIDD-AIVGRRKLQYEGEVRKNPLNYDSWFDYISLEETLGDKDRIREV 344
Query: 445 LEKT-SNPSVVRKVNYPRRRIF 465
E+ +N + + Y +R I+
Sbjct: 345 YERAIANVPLAEEKRYWQRYIY 366
>MGI|MGI:1922946 [details] [associations]
symbol:Prpf6 "PRP6 pre-mRNA splicing factor 6 homolog
(yeast)" species:10090 "Mus musculus" [GO:0000244 "assembly of
spliceosomal tri-snRNP" evidence=ISO] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IEA] [GO:0003713 "transcription
coactivator activity" evidence=ISO] [GO:0003723 "RNA binding"
evidence=ISO] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0005682 "U5 snRNP" evidence=ISO] [GO:0006396 "RNA
processing" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0006403 "RNA localization" evidence=ISO]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0043021
"ribonucleoprotein complex binding" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=ISO] [GO:0050681 "androgen receptor binding" evidence=ISO]
[GO:0071001 "U4/U6 snRNP" evidence=ISO] [GO:0071013 "catalytic step
2 spliceosome" evidence=ISO] InterPro:IPR003107 InterPro:IPR010491
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF06424 Pfam:PF13181 SMART:SM00386 MGI:MGI:1922946
GO:GO:0005634 GO:GO:0016607 GO:GO:0045944 GO:GO:0005682
GO:GO:0003723 GO:GO:0003713 eggNOG:COG0457 Gene3D:1.25.40.10
GO:GO:0050681 GO:GO:0043021 GO:GO:0000398 GO:GO:0071013
GO:GO:0046540 EMBL:CH466626 GO:GO:0006403 ChiTaRS:PRPF6
GO:GO:0071001 HOGENOM:HOG000116247 KO:K12855 OMA:IWLRAAY
InterPro:IPR027108 PANTHER:PTHR11246:SF1 CTD:24148
GeneTree:ENSGT00550000075016 HOVERGEN:HBG023330 EMBL:BC005801
EMBL:BC014869 EMBL:BC023691 EMBL:BC025030 EMBL:AK011639
EMBL:AK145461 EMBL:AK081998 EMBL:AL844529 IPI:IPI00130409
IPI:IPI00229813 RefSeq:NP_598462.1 UniGene:Mm.292001
ProteinModelPortal:Q91YR7 SMR:Q91YR7 STRING:Q91YR7
PhosphoSite:Q91YR7 PaxDb:Q91YR7 PRIDE:Q91YR7
Ensembl:ENSMUST00000002529 Ensembl:ENSMUST00000136481 GeneID:68879
KEGG:mmu:68879 UCSC:uc008omy.1 InParanoid:Q3ULJ7 NextBio:328105
Bgee:Q91YR7 CleanEx:MM_PRPF6 Genevestigator:Q91YR7
GermOnline:ENSMUSG00000002455 Uniprot:Q91YR7
Length = 941
Score = 167 (63.8 bits), Expect = 7.9e-09, P = 7.9e-09
Identities = 66/269 (24%), Positives = 113/269 (42%)
Query: 8 PEDGRPYVALGKVLSKQSKVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARE 67
P ++A K+ S+ ++ AR + AK + ++ LE LGNI A+E
Sbjct: 639 PNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVFMKS--VKLEWVLGNISAAQE 696
Query: 68 LFDASTVADKGHIAAWHGWAVLELRQGNI-KKARQLLAKGLKFCGGNEYIYQTLALLEAK 126
L + + + W +E QG + +KAR+ +GLK C + ++ L+ LE K
Sbjct: 697 LCEEALRHYEDFPKLWMMKGQIE-EQGELMEKAREAYNQGLKKCPHSTPLWLLLSRLEEK 755
Query: 127 ANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWH 186
+ +AR + ++ NPK+ W+ ++E + A L +A+Q P + W
Sbjct: 756 IGQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNIANTLMAKALQECPNSGILWS 815
Query: 187 VWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEID 246
EA K LK DP +L ++A L + AR+ F R +ID
Sbjct: 816 EAVFLEARPQRKTKSVDALKKCE----HDPHVLLAVAKLFWSERKITKAREWFHRTVKID 871
Query: 247 PRHQPVWIAWGWMEWKEGNLDTARELYER 275
W + E + G + E+ +R
Sbjct: 872 SDLGDAWAFFYKFELQHGTEEQQEEVRKR 900
Score = 161 (61.7 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 60/297 (20%), Positives = 118/297 (39%)
Query: 48 IWQCWAVLENKLGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGL 107
+W A + G++ AR + + A+ W LE ++AR+LLAK
Sbjct: 610 LWLMGAKSKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENNEYERARRLLAKA- 668
Query: 108 KFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAA 167
+ ++ LE A+ L +A + W+ Q+E Q E A
Sbjct: 669 RSSAPTARVFMKSVKLEWVLGNISAAQELCEEALRHYEDFPKLWMMKGQIEEQGELMEKA 728
Query: 168 RQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEY 227
R+ + + ++ P + W + E +G + + + +L+ NP++P L LEY
Sbjct: 729 REAYNQGLKKCPHSTPLWLLLSRLEEKIGQLTRARAILEKSRLKNPKNPGLWLESVRLEY 788
Query: 228 KYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAA 287
+ N+A L +A + P +W ++E + + + ++ + A
Sbjct: 789 RAGLKNIANTLMAKALQECPNSGILWSEAVFLEARPQRKTKSVDALKKCEHDPHVLLAVA 848
Query: 288 RCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEIR 344
+ W E+++ + AR F ++ I+S W + + E G + EE+R
Sbjct: 849 KLF--WS--ERKI---TKAREWFHRTVKIDSDLGDAWAFFYKFELQHGTEEQQEEVR 898
Score = 153 (58.9 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 52/216 (24%), Positives = 87/216 (40%)
Query: 128 NRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHV 187
N E AR ++ A + P + W+ + E + L +RAV PK W +
Sbjct: 554 NALECARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVLWLM 613
Query: 188 WGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDP 247
+ G + + +L + NP + + LE + + AR+L +A P
Sbjct: 614 GAKSKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAP 673
Query: 248 RHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQRVGNLSAAR 307
+ V++ +EW GN+ A+EL E AL E + G +E++ + AR
Sbjct: 674 TAR-VFMKSVKLEWVLGNISAAQELCEEALR---HYEDFPKLWMMKGQIEEQGELMEKAR 729
Query: 308 RLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEI 343
+ L S W+ ++LEE G RA I
Sbjct: 730 EAYNQGLKKCPHSTPLWLLLSRLEEKIGQLTRARAI 765
Score = 152 (58.6 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 63/255 (24%), Positives = 99/255 (38%)
Query: 27 VAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARELFDASTVADKGHIAAWHGW 86
V AR+I A QA IW LE++ +AR L A + +
Sbjct: 624 VPAARSILALAFQANPNSEE-IWLAAVKLESENNEYERARRLL-AKARSSAPTARVFMKS 681
Query: 87 AVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPK 146
LE GNI A++L + L+ ++ +E + E+AR + Q K P
Sbjct: 682 VKLEWVLGNISAAQELCEEALRHYEDFPKLWMMKGQIEEQGELMEKAREAYNQGLKKCPH 741
Query: 147 SCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLK 206
S W+ S++E + AR + E++ +PKN W E G + L+
Sbjct: 742 STPLWLLLSRLEEKIGQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNIANTLMA 801
Query: 207 IGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNL 266
P +L LE + + ++ E DP H V +A + W E +
Sbjct: 802 KALQECPNSGILWSEAVFLEARPQRKTKSVDALKKC-EHDP-H--VLLAVAKLFWSERKI 857
Query: 267 DTARELYERALSIDS 281
ARE + R + IDS
Sbjct: 858 TKAREWFHRTVKIDS 872
Score = 147 (56.8 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 61/231 (26%), Positives = 99/231 (42%)
Query: 167 ARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLE 226
AR ++ A+Q P + W FE N G + + LL+ A P+ VL A +
Sbjct: 559 ARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVLWLMGAKSK 618
Query: 227 YKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESA 286
+ AR + A + +P + +W+A +E + + AR L +A S T
Sbjct: 619 WLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPT---- 674
Query: 287 ARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEIRNL 346
AR LE +GN+SAA+ L +L WM Q+EE QG + E+ R
Sbjct: 675 ARVFMKSVKLEWVLGNISAAQELCEEALRHYEDFPKLWMMKGQIEE-QGELM--EKAREA 731
Query: 347 YFQQRTEVVDDAS-WVMGFMDIIDPALDRIKQLLN-LEKSSYKEPSAYSPG 395
Y Q + W++ + ++ + ++ + LEKS K P +PG
Sbjct: 732 YNQGLKKCPHSTPLWLL--LSRLEEKIGQLTRARAILEKSRLKNPK--NPG 778
Score = 144 (55.7 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 65/277 (23%), Positives = 121/277 (43%)
Query: 59 LGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQ 118
+ +I KAR L + + H AW A LE G ++ AR L+ KG + C +E ++
Sbjct: 288 INDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWL 347
Query: 119 TLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQAS 178
A L+ + A+ + QA + P+S +I +++E A +++ +A++
Sbjct: 348 EAARLQPG----DTAKAVVAQAVRHLPQSVRIYIRAAELETDIR---AKKRVLRKALEHV 400
Query: 179 PKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVN--PRDPVLLQSLALLEYKYSTANLAR 236
P + W +A + + + + AV P L +LA LE T AR
Sbjct: 401 PNSVRLW------KAAVELEEPEDARIMLSRAVECCPTSVELWLALARLE----TYENAR 450
Query: 237 KLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERAL-SIDSTTESAARCLQAW-G 294
K+ +A E P + +WI +E GN ++ +RA+ S+ + R + W
Sbjct: 451 KVLNKARENIPTDRHIWITAAKLEEANGNTQMVEKIIDRAITSLRANGVEINR--EQWIQ 508
Query: 295 VLEQ--RVGNLSAARRLFRSSLNINSQSYITWMTWAQ 329
E+ R G+++ + + R+ + I + TW +
Sbjct: 509 DAEECDRAGSVATCQAVMRAVIGIGIEEEDRKHTWME 545
Score = 138 (53.6 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 55/238 (23%), Positives = 100/238 (42%)
Query: 99 ARQLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQME 158
AR + A L+ + ++ A E E L ++A PK+ W+ ++ +
Sbjct: 559 ARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVLWLMGAKSK 618
Query: 159 MQQENNLAARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVL 218
+ AAR + A QA+P + W E+ ++ ++LL + P V
Sbjct: 619 WLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVF 678
Query: 219 LQSLALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNL-DTARELYERAL 277
++S+ L E+ + A++L A +W+ G +E ++G L + ARE Y + L
Sbjct: 679 MKSVKL-EWVLGNISAAQELCEEALRHYEDFPKLWMMKGQIE-EQGELMEKAREAYNQGL 736
Query: 278 SIDSTTESAARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQG 335
S L LE+++G L+ AR + S N ++ W+ +LE G
Sbjct: 737 K--KCPHSTPLWLLL-SRLEEKIGQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAG 791
Score = 128 (50.1 bits), Expect = 0.00014, P = 0.00014
Identities = 70/328 (21%), Positives = 124/328 (37%)
Query: 5 DYWPEDGRPYVALGKVLSKQSKVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGK 64
+ W +D G V + Q A RA+ G + ++ ++ + + + +
Sbjct: 504 EQWIQDAEECDRAGSVATCQ---AVMRAVIGIGIEEEDRKHTWMEDADSCVAHNALECAR 560
Query: 65 ARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLE 124
A + K + W A E G + LL + + C E ++ A +
Sbjct: 561 AIYAYALQVFPSKKSV--WLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVLWLMGAKSK 618
Query: 125 AKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNR-F 183
A AR++ A + NP S W+A ++E + AR+L +A ++P R F
Sbjct: 619 WLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVF 678
Query: 184 AWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRAS 243
V E +G I ++L + P L +E + AR+ + +
Sbjct: 679 MKSVK--LEWVLGNISAAQELCEEALRHYEDFPKLWMMKGQIEEQGELMEKAREAYNQGL 736
Query: 244 EIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQRVGNL 303
+ P P+W+ +E K G L AR + E++ ++ L++ LE R G
Sbjct: 737 KKCPHSTPLWLLLSRLEEKIGQLTRARAILEKSRL--KNPKNPGLWLESVR-LEYRAGLK 793
Query: 304 SAARRLFRSSLNINSQSYITWMTWAQLE 331
+ A L +L S I W LE
Sbjct: 794 NIANTLMAKALQECPNSGILWSEAVFLE 821
>TAIR|locus:2161363 [details] [associations]
symbol:AT5G45990 species:3702 "Arabidopsis thaliana"
[GO:0005622 "intracellular" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006396 "RNA processing" evidence=IEA;ISS]
[GO:0006397 "mRNA processing" evidence=IEA] InterPro:IPR003107
InterPro:IPR008847 InterPro:IPR011990 InterPro:IPR013026
Pfam:PF02184 Pfam:PF05843 PROSITE:PS50293 SMART:SM00386
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006397
Gene3D:1.25.40.10 EMBL:AB006698 eggNOG:NOG327505
HOGENOM:HOG000207972 IPI:IPI00521045 RefSeq:NP_199411.1
UniGene:At.55396 ProteinModelPortal:Q9FNM3 SMR:Q9FNM3 PaxDb:Q9FNM3
PRIDE:Q9FNM3 EnsemblPlants:AT5G45990.1 GeneID:834639
KEGG:ath:AT5G45990 TAIR:At5g45990 InParanoid:Q9FNM3 OMA:SAFIRYA
PhylomeDB:Q9FNM3 ProtClustDB:CLSN2684756 Genevestigator:Q9FNM3
Uniprot:Q9FNM3
Length = 673
Score = 165 (63.1 bits), Expect = 8.2e-09, P = 8.2e-09
Identities = 68/293 (23%), Positives = 131/293 (44%)
Query: 64 KARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALL 123
+ R+ F+ + +I W +A E Q + +AR + + L+ N ++ A
Sbjct: 62 RRRKEFEDQIRRARWNIQVWVKYAKWEESQMDYARARSVWERALEGEYRNHTLWVKYAEF 121
Query: 124 EAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRF 183
E K ARN++ ++ P+ W + ME + N ARQ+FER + SP +
Sbjct: 122 EMKNKFVNNARNVWDRSVTLLPRVDQLWEKYIYMEEKLGNVTGARQIFERWMNWSPDQK- 180
Query: 184 AWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYS-TANLARKLFRRA 242
AW + FE I++ + + + +P+ ++ A E K LAR+++ RA
Sbjct: 181 AWLCFIKFELRYNEIERARSIYERFVLCHPKVSAFIR-YAKFEMKRGGQVKLAREVYERA 239
Query: 243 SEI---DPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCL-QAWGVLEQ 298
+ D + +++++ E + ++ AR +Y+ AL D + A L + + E+
Sbjct: 240 VDKLANDEEAEILFVSFAEFEERCKEVERARFIYKFAL--DHIRKGRAEELYKKFVAFEK 297
Query: 299 RVGN-------LSAARRL-FRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEI 343
+ G+ + +R + ++ N +Y +W + +LEE GN R EI
Sbjct: 298 QYGDKEGIEDAIVGKKRFEYEDEVSKNPLNYDSWFDYVRLEESVGNKDRIREI 350
Score = 156 (60.0 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 67/290 (23%), Positives = 131/290 (45%)
Query: 44 ENPYIWQCW---AVLENKLGNIGKARELFDASTV-----ADKG----HIAAWHGWAVLE- 90
+NP + W LE +GN + RE+++ + +K +I W +A+ E
Sbjct: 323 KNPLNYDSWFDYVRLEESVGNKDRIREIYERAIANVPPAQEKRFWQRYIYLWINYALYEE 382
Query: 91 LRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKAN----RYEQARNLFRQATKCNPK 146
+ ++++ R + + LK ++ + + LL A+ AR + A PK
Sbjct: 383 IETKDVERTRDVYRECLKLIPHTKFSFAKIWLLAAEYEIRQLNLTGARQILGNAIGKAPK 442
Query: 147 SCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLK 206
+ + +ME++ N R+L+ER ++ SP+N +AW + FE ++ ++ + + +
Sbjct: 443 -VKIFKKYIEMELKLVNIDRCRKLYERFLEWSPENCYAWRNYAEFEISLAETERARAIFE 501
Query: 207 IGHAVNPRD-PVLLQSLALLEYKYSTANL--ARKLFRRASEIDPRHQPVWIAWGWME--- 260
+ + D P LL ++++ S R L+ R + +H VWI++ E
Sbjct: 502 LAISQPALDMPELLWK-TYIDFEISEGEFEKTRALYERLLD-RTKHCKVWISFAKFEASA 559
Query: 261 --WKEGNLDTARELYERALSI--DSTTE---SAARCLQAWGVLEQRVGNL 303
KE + +AR +++RA + D+T E A L+ W +E G L
Sbjct: 560 SEHKEDGIKSARVIFDRANTYYKDTTPELEEERATLLEDWLNMETGFGEL 609
>ASPGD|ASPL0000068414 [details] [associations]
symbol:AN7447 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0045292 "mRNA cis splicing,
via spliceosome" evidence=IEA] InterPro:IPR003107
InterPro:IPR010491 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF06424 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 SMART:SM00386 GO:GO:0005634 eggNOG:COG0457
Gene3D:1.25.40.10 EMBL:AACD01000129 EMBL:BN001304 GO:GO:0000398
HOGENOM:HOG000116247 KO:K12855 OMA:IWLRAAY OrthoDB:EOG4D82F8
InterPro:IPR027108 PANTHER:PTHR11246:SF1 RefSeq:XP_680716.1
ProteinModelPortal:Q5AW83 STRING:Q5AW83
EnsemblFungi:CADANIAT00000537 GeneID:2869476 KEGG:ani:AN7447.2
Uniprot:Q5AW83
Length = 941
Score = 165 (63.1 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 65/281 (23%), Positives = 116/281 (41%)
Query: 2 KCIDYWPEDGRPYVALGKVLSKQSKVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGN 61
K ++ P+ ++ L K + ++ +AR + + N IW LE
Sbjct: 600 KAVEACPQSEELWLQLAKEKWQSGEIDDARRVLGRAFNQNPN-NEDIWLAAVKLEADAQQ 658
Query: 62 IGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLA 121
+AREL A+ + G W E + GN+ A L+ +GL+ + ++
Sbjct: 659 TDQARELL-ATARREAGTDRVWIKSVAFERQLGNVDDALDLVNQGLQLYPKADKLWMMKG 717
Query: 122 LLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKN 181
+ N+ QAR + T+ PKS A W+ S++E + + AR + +RA A P +
Sbjct: 718 QIYESQNKLPQAREAYGTGTRACPKSVALWLLASRLEEKAGAVVRARSVLDRARLAVPNS 777
Query: 182 RFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRR 241
W E I + K L+ P LL S ++ + + AR L
Sbjct: 778 PELWTESVRVERRANNIPQAKVLMARALQEVPSSG-LLWSESIWHLEPRSQRKARSL-EA 835
Query: 242 ASEIDPRHQPV-WIAWGWMEWKEGNLDTARELYERALSIDS 281
++D + P+ +I + W E L+ A +E+A+ +S
Sbjct: 836 IKKVD--NDPILFITVARIFWGERRLEKAMTWFEKAIISNS 874
Score = 164 (62.8 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 66/298 (22%), Positives = 122/298 (40%)
Query: 48 IWQCWAVLENKLGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGL 107
IW A G AR ++ + + W A LE G + Q+L K +
Sbjct: 543 IWMDDAKASISRGKYETARAIYAYALRVFVNRRSIWVAAADLERNHGTKEALWQVLEKAV 602
Query: 108 KFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAA 167
+ C +E ++ LA + ++ + AR + +A NP + W+A ++E + A
Sbjct: 603 EACPQSEELWLQLAKEKWQSGEIDDARRVLGRAFNQNPNNEDIWLAAVKLEADAQQTDQA 662
Query: 168 RQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEY 227
R+L A + + +R W FE +G +D L+ G + P+ L +
Sbjct: 663 RELLATARREAGTDR-VWIKSVAFERQLGNVDDALDLVNQGLQLYPKADKLWMMKGQIYE 721
Query: 228 KYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERA-LSIDSTTESA 286
+ AR+ + + P+ +W+ +E K G + AR + +RA L++ ++ E
Sbjct: 722 SQNKLPQAREAYGTGTRACPKSVALWLLASRLEEKAGAVVRARSVLDRARLAVPNSPELW 781
Query: 287 ARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMT--WAQLEEDQGNSVRAEE 342
++ +E+R N+ A+ L +L S + W W LE R+ E
Sbjct: 782 TESVR----VERRANNIPQAKVLMARALQEVPSSGLLWSESIW-HLEPRSQRKARSLE 834
Score = 161 (61.7 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 77/350 (22%), Positives = 140/350 (40%)
Query: 2 KCIDYWPEDGRPYVALGKVLSKQSKVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGN 61
K ++ P ++AL ++ + ++ A A+ + T E IW + L+ ++G
Sbjct: 426 KAVELIPLSVELWLALARLETPENAQKVLNA--ARKAVPTSHE---IWIAASRLQEQMGT 480
Query: 62 IGKARELFDA-STVADKGHIAAWHGW-AVLEL--RQGNIKKA----RQLLAKGLKFCGGN 113
K + A ++A + + W A E +G + R+ L GL
Sbjct: 481 FNKVNVMKRAVQSLARENAMLKREEWIAEAEKCEEEGAVLTCGAIIRETLGWGLDEDDDR 540
Query: 114 EYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFER 173
+ I+ A +YE AR ++ A + + W+A + +E A Q+ E+
Sbjct: 541 KDIWMDDAKASISRGKYETARAIYAYALRVFVNRRSIWVAAADLERNHGTKEALWQVLEK 600
Query: 174 AVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTAN 233
AV+A P++ W + G ID +++L NP + + + LE +
Sbjct: 601 AVEACPQSEELWLQLAKEKWQSGEIDDARRVLGRAFNQNPNNEDIWLAAVKLEADAQQTD 660
Query: 234 LARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAW 293
AR+L A + VWI E + GN+D A +L + L + A +
Sbjct: 661 QARELLATARR-EAGTDRVWIKSVAFERQLGNVDDALDLVNQGLQL---YPKADKLWMMK 716
Query: 294 GVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEI 343
G + + L AR + + +S W+ ++LEE G VRA +
Sbjct: 717 GQIYESQNKLPQAREAYGTGTRACPKSVALWLLASRLEEKAGAVVRARSV 766
Score = 137 (53.3 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 71/300 (23%), Positives = 130/300 (43%)
Query: 99 ARQLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQME 158
AR LLAK ++ + ++ LA LE N A+ + A K P S WIA S+++
Sbjct: 420 ARLLLAKAVELIPLSVELWLALARLETPEN----AQKVLNAARKAVPTSHEIWIAASRLQ 475
Query: 159 MQQENNLAARQLFERAVQA-SPKNRFAWHVWGIFEANM----GFIDKGKKLLK--IGHAV 211
+Q + +RAVQ+ + +N I EA G + +++ +G +
Sbjct: 476 -EQMGTFNKVNVMKRAVQSLARENAMLKREEWIAEAEKCEEEGAVLTCGAIIRETLGWGL 534
Query: 212 NPRDP---VLLQSL--ALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNL 266
+ D + + ++ KY TA R ++ A + + +W+A +E G
Sbjct: 535 DEDDDRKDIWMDDAKASISRGKYETA---RAIYAYALRVFVNRRSIWVAAADLERNHGTK 591
Query: 267 DTARELYERALSIDSTTESAARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMT 326
+ ++ E+A +++ +S LQ + + G + ARR+ + N N + W+
Sbjct: 592 EALWQVLEKA--VEACPQSEELWLQL-AKEKWQSGEIDDARRVLGRAFNQNPNNEDIWLA 648
Query: 327 WAQLEEDQGNSVRAEEIRNLYFQQRTEVVDDASWV--MGF---MDIIDPALDRIKQLLNL 381
+LE D + + ++ R L R E D W+ + F + +D ALD + Q L L
Sbjct: 649 AVKLEAD---AQQTDQARELLATARREAGTDRVWIKSVAFERQLGNVDDALDLVNQGLQL 705
Score = 128 (50.1 bits), Expect = 0.00014, P = 0.00014
Identities = 59/240 (24%), Positives = 99/240 (41%)
Query: 56 ENKLGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEY 115
E ++G++ + R L ++ T + H W A LE G I AR ++AKG + C +E
Sbjct: 285 EIEVGDVKRVRVLLESVTRTNPKHAPGWIALARLEELAGRIVTARNVIAKGCELCPKSED 344
Query: 116 IYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAV 175
+ L + N A+ + A K N S WI ++E + A + + +A+
Sbjct: 345 AW----LENIRLNEGHNAKVIAANAIKNNDHSTRLWIEAMRLETEPR---AKKNVLRQAI 397
Query: 176 QASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVN--PRDPVLLQSLALLEYKYSTAN 233
P++ W EA D L + AV P L +LA LE T
Sbjct: 398 LHIPQSVTIWK-----EAVNLEEDPADARLLLAKAVELIPLSVELWLALARLE----TPE 448
Query: 234 LARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAW 293
A+K+ A + P +WIA ++ + G + + +RA+ E+A + W
Sbjct: 449 NAQKVLNAARKAVPTSHEIWIAASRLQEQMGTFNKVNVM-KRAVQ-SLARENAMLKREEW 506
>TAIR|locus:2089999 [details] [associations]
symbol:AT3G13210 species:3702 "Arabidopsis thaliana"
[GO:0005622 "intracellular" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006396 "RNA processing" evidence=IEA;ISS]
[GO:0006397 "mRNA processing" evidence=IEA] InterPro:IPR003107
InterPro:IPR008847 InterPro:IPR011990 InterPro:IPR013026
Pfam:PF02184 Pfam:PF05843 PROSITE:PS50293 SMART:SM00386
GO:GO:0005634 EMBL:CP002686 GO:GO:0006397 Gene3D:1.25.40.10
IPI:IPI00519685 RefSeq:NP_187927.1 UniGene:At.53288
ProteinModelPortal:F4JC74 SMR:F4JC74 EnsemblPlants:AT3G13210.1
GeneID:820511 KEGG:ath:AT3G13210 OMA:NEARNVW Uniprot:F4JC74
Length = 657
Score = 163 (62.4 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 76/319 (23%), Positives = 138/319 (43%)
Query: 45 NPYIWQCWAVLENKLGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLA 104
N +W +A E K ++ +AR ++D + W+ + +E + GNI ARQ+L
Sbjct: 90 NTQVWVKYADFEMKNKSVNEARNVWDRAVSLLPRVDQLWYKFIHMEEKLGNIAGARQILE 149
Query: 105 KGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENN 164
+ + C ++ + E K N E AR+++ + C+PK A +I +++ EM+
Sbjct: 150 RWIH-CSPDQQAWLCFIKFELKYNEIECARSIYERFVLCHPKVSA-YIRYAKFEMKHGQV 207
Query: 165 LAARQLFERAVQASPKNRFA---WHVWGIFEANMGF-IDKGKKLLKIGHAVNPRDP-VLL 219
A ++FERA + + A + + FE F +D+ K G A N V
Sbjct: 208 ELAMKVFERAKKELADDEEAEILFVAFAEFEEQYKFALDQIPK----GRAENLYSKFVAF 263
Query: 220 QSLALLEYKYSTANLARKLFRRASEI--DPRHQPVWIAWGWMEWKEGNLDTARELYERAL 277
+ + A + ++ + E+ +P + W + +E GN D RE+YERA+
Sbjct: 264 EKQNGDKEGIEDAIIGKRRCQYEDEVRKNPLNYDSWFDFVRLEETVGNKDRIREIYERAV 323
Query: 278 SIDSTTESAA-----RCLQAW----GVLEQRVGNLSAARRLFRSSLNINSQSYIT----W 324
+ E+ R + W E ++ + R ++R+ L + S + W
Sbjct: 324 ANVPPPEAQEKRYWQRYIYLWINYAFFAEMVTEDVESTRDVYRACLKLIPHSKFSFAKIW 383
Query: 325 MTWAQLEEDQGNSVRAEEI 343
+ AQ E Q N A +I
Sbjct: 384 LLAAQHEIRQLNLTGARQI 402
Score = 115 (45.5 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 50/231 (21%), Positives = 101/231 (43%)
Query: 49 WQCWAVLENKLGNIGKARELFDASTV-------ADKGH----IAAWHGWAVL-ELRQGNI 96
W + LE +GN + RE+++ + +K + I W +A E+ ++
Sbjct: 299 WFDFVRLEETVGNKDRIREIYERAVANVPPPEAQEKRYWQRYIYLWINYAFFAEMVTEDV 358
Query: 97 KKARQLLAKGLKFCGGNEYIYQTLALLEAKAN----RYEQARNLFRQATKCNPKSCASWI 152
+ R + LK +++ + + LL A+ AR + A PK +
Sbjct: 359 ESTRDVYRACLKLIPHSKFSFAKIWLLAAQHEIRQLNLTGARQILGNAIGKAPKD-KIFK 417
Query: 153 AWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVN 212
+ ++E+Q N R+L+ER ++ SP N +AW + FE ++ ++ + + ++ +
Sbjct: 418 KYIEIELQLRNIDRCRKLYERYLEWSPGNCYAWRKYAEFEMSLAETERTRAIFELAISQP 477
Query: 213 PRD-PVLLQSLALLEYKYSTANL--ARKLFRRASEIDPRHQPVWIAWGWME 260
D P LL ++++ S L R L+ R + +H VW+ + E
Sbjct: 478 ALDMPELLWK-TYIDFEISEGELERTRALYERLLD-RTKHCKVWVDFAKFE 526
Score = 55 (24.4 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 18/54 (33%), Positives = 27/54 (50%)
Query: 259 MEWKEGNLDTARELYERALSI--DSTTE---SAARCLQAWGVLEQRVGNLSAAR 307
+E K+ + ARE+++RA + DST E A L+ W +E G L R
Sbjct: 542 IERKKDGIKRAREIFDRANTYNKDSTPELKEERAMLLEDWLNMETGFGKLGDVR 595
>UNIPROTKB|F1N9U0 [details] [associations]
symbol:PRPF6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005682 "U5 snRNP"
evidence=IEA] [GO:0006403 "RNA localization" evidence=IEA]
[GO:0043021 "ribonucleoprotein complex binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=IEA] [GO:0050681 "androgen receptor
binding" evidence=IEA] [GO:0071001 "U4/U6 snRNP" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR003107 InterPro:IPR010491 InterPro:IPR011990
InterPro:IPR013026 Pfam:PF06424 PROSITE:PS50293 SMART:SM00386
GO:GO:0045944 GO:GO:0005682 GO:GO:0003723 GO:GO:0003713
Gene3D:1.25.40.10 GO:GO:0043021 GO:GO:0000398 GO:GO:0071013
GO:GO:0046540 GO:GO:0006403 GO:GO:0071001 OMA:IWLRAAY
InterPro:IPR027108 PANTHER:PTHR11246:SF1
GeneTree:ENSGT00550000075016 EMBL:AADN02019178 EMBL:AADN02019179
EMBL:AADN02019180 IPI:IPI00589966 Ensembl:ENSGALT00000009656
Uniprot:F1N9U0
Length = 945
Score = 165 (63.1 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 63/268 (23%), Positives = 113/268 (42%)
Query: 8 PEDGRPYVALGKVLSKQSKVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARE 67
P ++A K+ S+ ++ AR + AK + ++ LE LGNI A+E
Sbjct: 643 PNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVFMKS--VKLEWVLGNIAAAQE 700
Query: 68 LFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKA 127
L + + + W +E ++ +++AR+ +GLK C + ++ L+ LE K
Sbjct: 701 LCEEALRHYEDFPKLWMMKGQIEEQKELVERAREAYNQGLKKCPHSIPLWLLLSRLEEKV 760
Query: 128 NRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHV 187
+ +AR + ++ NPK+ W+ ++E + A L +A+Q P + W
Sbjct: 761 GQLTRARAILEKSRLKNPKNADLWLESVRLEYRAGLKNIANTLMAKALQECPNSGILWSE 820
Query: 188 WGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDP 247
EA K LK DP +L ++A L + AR+ F R +ID
Sbjct: 821 AIFLEARPQRKTKSVDALKKCE----HDPHVLLAVAKLFWSERKITKAREWFHRTVKIDS 876
Query: 248 RHQPVWIAWGWMEWKEGNLDTARELYER 275
W + E + G + E+ +R
Sbjct: 877 DLGDAWAFFYKFELQHGTEEQQEEVRKR 904
Score = 153 (58.9 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 52/216 (24%), Positives = 87/216 (40%)
Query: 128 NRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHV 187
N E AR ++ A + P + W+ + E + L +RAV PK W +
Sbjct: 558 NALECARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVLWLM 617
Query: 188 WGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDP 247
+ G + + +L + NP + + LE + + AR+L +A P
Sbjct: 618 GAKSKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAP 677
Query: 248 RHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQRVGNLSAAR 307
+ V++ +EW GN+ A+EL E AL E + G +E++ + AR
Sbjct: 678 TAR-VFMKSVKLEWVLGNIAAAQELCEEALR---HYEDFPKLWMMKGQIEEQKELVERAR 733
Query: 308 RLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEI 343
+ L S W+ ++LEE G RA I
Sbjct: 734 EAYNQGLKKCPHSIPLWLLLSRLEEKVGQLTRARAI 769
Score = 152 (58.6 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 65/299 (21%), Positives = 116/299 (38%)
Query: 48 IWQCWAVLENKLGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGL 107
+W A + G++ AR + + A+ W LE ++AR+LLAK
Sbjct: 614 LWLMGAKSKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENNEYERARRLLAKA- 672
Query: 108 KFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAA 167
+ ++ LE A+ L +A + W+ Q+E Q+E A
Sbjct: 673 RSSAPTARVFMKSVKLEWVLGNIAAAQELCEEALRHYEDFPKLWMMKGQIEEQKELVERA 732
Query: 168 RQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEY 227
R+ + + ++ P + W + E +G + + + +L+ NP++ L LEY
Sbjct: 733 REAYNQGLKKCPHSIPLWLLLSRLEEKVGQLTRARAILEKSRLKNPKNADLWLESVRLEY 792
Query: 228 KYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTT--ES 285
+ N+A L +A + P G + W E AR + S+D+ E
Sbjct: 793 RAGLKNIANTLMAKALQECPNS-------GIL-WSEAIFLEARP-QRKTKSVDALKKCEH 843
Query: 286 AARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEIR 344
L A L ++ AR F ++ I+S W + + E G + EE+R
Sbjct: 844 DPHVLLAVAKLFWSERKITKAREWFHRTVKIDSDLGDAWAFFYKFELQHGTEEQQEEVR 902
Score = 151 (58.2 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 63/255 (24%), Positives = 99/255 (38%)
Query: 27 VAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARELFDASTVADKGHIAAWHGW 86
V AR+I A QA IW LE++ +AR L A + +
Sbjct: 628 VPAARSILALAFQANPNSEE-IWLAAVKLESENNEYERARRLL-AKARSSAPTARVFMKS 685
Query: 87 AVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPK 146
LE GNI A++L + L+ ++ +E + E+AR + Q K P
Sbjct: 686 VKLEWVLGNIAAAQELCEEALRHYEDFPKLWMMKGQIEEQKELVERAREAYNQGLKKCPH 745
Query: 147 SCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLK 206
S W+ S++E + AR + E++ +PKN W E G + L+
Sbjct: 746 SIPLWLLLSRLEEKVGQLTRARAILEKSRLKNPKNADLWLESVRLEYRAGLKNIANTLMA 805
Query: 207 IGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNL 266
P +L LE + + ++ E DP H V +A + W E +
Sbjct: 806 KALQECPNSGILWSEAIFLEARPQRKTKSVDALKKC-EHDP-H--VLLAVAKLFWSERKI 861
Query: 267 DTARELYERALSIDS 281
ARE + R + IDS
Sbjct: 862 TKAREWFHRTVKIDS 876
Score = 142 (55.0 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 64/277 (23%), Positives = 121/277 (43%)
Query: 59 LGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQ 118
+ +I KAR L + + H AW A LE G ++ AR L+ KG + C +E ++
Sbjct: 292 INDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWL 351
Query: 119 TLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQAS 178
A L+ + A+ + QA + P+S +I +++E A +++ +A++
Sbjct: 352 EAARLQPG----DTAKAVVAQAVRHLPQSVRIYIRAAELETDIR---AKKRVLRKALEHV 404
Query: 179 PKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVN--PRDPVLLQSLALLEYKYSTANLAR 236
P + W +A + + + + AV P L +LA LE T AR
Sbjct: 405 PNSVRLW------KAAVELEEPEDARIMLSRAVECCPTSVELWLALARLE----TYENAR 454
Query: 237 KLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERAL-SIDSTTESAARCLQAW-G 294
K+ +A E P + +WI +E GN ++ +RA+ S+ + R + W
Sbjct: 455 KVLNKARENIPTDRHIWITAAKLEEANGNTQMVEKIIDRAITSLRANGVEINR--EQWIQ 512
Query: 295 VLEQ--RVGNLSAARRLFRSSLNINSQSYITWMTWAQ 329
E+ + G+++ + + R+ + I + TW +
Sbjct: 513 DAEECDKAGSVATCQAIMRAVIGIGIEEEDRKHTWME 549
Score = 139 (54.0 bits), Expect = 8.9e-06, P = 8.9e-06
Identities = 56/224 (25%), Positives = 95/224 (42%)
Query: 167 ARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLE 226
AR ++ A+Q P + W FE N G + + LL+ A P+ VL A +
Sbjct: 563 ARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVLWLMGAKSK 622
Query: 227 YKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESA 286
+ AR + A + +P + +W+A +E + + AR L +A S T
Sbjct: 623 WLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPT---- 678
Query: 287 ARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEIRNL 346
AR LE +GN++AA+ L +L WM Q+EE + RA E N
Sbjct: 679 ARVFMKSVKLEWVLGNIAAAQELCEEALRHYEDFPKLWMMKGQIEEQKELVERAREAYNQ 738
Query: 347 YFQQRTEVVDDASWVMGFMDIIDPALDRIKQLLN-LEKSSYKEP 389
++ + W++ + ++ + ++ + LEKS K P
Sbjct: 739 GLKKCPHSIP--LWLL--LSRLEEKVGQLTRARAILEKSRLKNP 778
Score = 138 (53.6 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 53/240 (22%), Positives = 100/240 (41%)
Query: 99 ARQLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQME 158
AR + A L+ + ++ A E E L ++A PK+ W+ ++ +
Sbjct: 563 ARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVLWLMGAKSK 622
Query: 159 MQQENNLAARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVL 218
+ AAR + A QA+P + W E+ ++ ++LL + P V
Sbjct: 623 WLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVF 682
Query: 219 LQSLALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALS 278
++S+ L E+ A++L A +W+ G +E ++ ++ ARE Y + L
Sbjct: 683 MKSVKL-EWVLGNIAAAQELCEEALRHYEDFPKLWMMKGQIEEQKELVERAREAYNQGL- 740
Query: 279 IDSTTESAARCLQAWGVL---EQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQG 335
+ + W +L E++VG L+ AR + S N ++ W+ +LE G
Sbjct: 741 -----KKCPHSIPLWLLLSRLEEKVGQLTRARAILEKSRLKNPKNADLWLESVRLEYRAG 795
Score = 128 (50.1 bits), Expect = 0.00014, P = 0.00014
Identities = 69/321 (21%), Positives = 123/321 (38%)
Query: 5 DYWPEDGRPYVALGKVLSKQSKVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGK 64
+ W +D G V + Q A RA+ G + ++ ++ + + + +
Sbjct: 508 EQWIQDAEECDKAGSVATCQ---AIMRAVIGIGIEEEDRKHTWMEDADSCVAHNALECAR 564
Query: 65 ARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLE 124
A + K + W A E G + LL + + C E ++ A +
Sbjct: 565 AIYAYALQVFPSKKSV--WLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVLWLMGAKSK 622
Query: 125 AKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNR-F 183
A AR++ A + NP S W+A ++E + AR+L +A ++P R F
Sbjct: 623 WLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVF 682
Query: 184 AWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRAS 243
V E +G I ++L + P L +E + AR+ + +
Sbjct: 683 MKSVK--LEWVLGNIAAAQELCEEALRHYEDFPKLWMMKGQIEEQKELVERAREAYNQGL 740
Query: 244 EIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQRVGNL 303
+ P P+W+ +E K G L AR + E++ ++A L++ LE R G
Sbjct: 741 KKCPHSIPLWLLLSRLEEKVGQLTRARAILEKSRL--KNPKNADLWLESVR-LEYRAGLK 797
Query: 304 SAARRLFRSSLNINSQSYITW 324
+ A L +L S I W
Sbjct: 798 NIANTLMAKALQECPNSGILW 818
>DICTYBASE|DDB_G0272374 [details] [associations]
symbol:prpf6 "pre-mRNA processing factor 6"
species:44689 "Dictyostelium discoideum" [GO:0006396 "RNA
processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IEA;ISS] [GO:0046540 "U4/U6 x
U5 tri-snRNP complex" evidence=ISS] InterPro:IPR003107
InterPro:IPR010491 InterPro:IPR011990 InterPro:IPR013026
Pfam:PF06424 PROSITE:PS50293 SMART:SM00386 dictyBase:DDB_G0272374
GenomeReviews:CM000151_GR eggNOG:COG0457 Gene3D:1.25.40.10
EMBL:AAFI02000008 GO:GO:0000398 GO:GO:0046540 KO:K12855 OMA:IWLRAAY
InterPro:IPR027108 PANTHER:PTHR11246:SF1 RefSeq:XP_645169.1
ProteinModelPortal:Q55A15 STRING:Q55A15 EnsemblProtists:DDB0233221
GeneID:8618341 KEGG:ddi:DDB_G0272374 InParanoid:Q55A15
ProtClustDB:CLSZ2729243 Uniprot:Q55A15
Length = 1014
Score = 165 (63.1 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 59/222 (26%), Positives = 108/222 (48%)
Query: 58 KLGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIY 117
++G+I KAR LF ++T ++ H +W A LE+ G I AR+++A+ K C +E ++
Sbjct: 282 EVGDIKKARLLFKSATTSNPKHSPSWIAAAKLEVLAGKIVDARKIIAQACKECPTSEEVW 341
Query: 118 QTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQA 177
A L+ N A+ + QA + P S W+ + +E Q + +++ RA++
Sbjct: 342 IENANLQTPDN----AKIVLAQAVRVIPHSVKIWLYAANLEKQLKMK---KRVLRRALEF 394
Query: 178 SPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVN--PRDPVLLQSLALLEYKYSTANLA 235
P + W EA + ++L +G AV P + L +LA LE T A
Sbjct: 395 IPTSVKLWK-----EAVELEEPEDARIL-LGRAVECVPDNIDLWLALANLE----TYEKA 444
Query: 236 RKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERAL 277
R++ +A + P +WI+ +E +G D ++ ++A+
Sbjct: 445 REVLNKARQALPSSSEIWISAAQLEESQGKNDNVNKIIKKAI 486
Score = 155 (59.6 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 66/264 (25%), Positives = 110/264 (41%)
Query: 14 YVALGKVLSKQSKVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKAR-ELFDAS 72
+VA K+ S+ +++ AR + K + E IW A+LE +LG K L +
Sbjct: 641 WVAAVKIESEMNELRAARNLLKKAREIAGTER--IWMKSALLERELGGDQKLELSLIEQG 698
Query: 73 TVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKANRYEQ 132
W A LE RQ + + N+ Q L + E
Sbjct: 699 LQKYPNSFKLWLMKAQLEERQAIANHQNNQNNQNNQNNQNNQN-NQNNNLQQISLTSIEI 757
Query: 133 ARNLFRQAT-KCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVWGIF 191
R ++ AT KC P + + WI S+ E + +N AR L E+A +P + + + F
Sbjct: 758 IRQTYKNATVKC-PNNGSVWIEASRFEKRNQNFNRARALLEQAKLKNPTDDDIFLEFVRF 816
Query: 192 EANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDPRHQP 251
E ++G + +L +G +P+ L L +E ++S N R + DP
Sbjct: 817 EDSLGNRKQAATILALGIQASPKSGKLWAELIAMEPRHSQRNKCVDALNRCNN-DPY--- 872
Query: 252 VWIAWGWMEWKEGNLDTARELYER 275
V+ + W +G LD A++ Y+R
Sbjct: 873 VFTQVSKIFWMDGKLDKAKQWYQR 896
Score = 145 (56.1 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 69/313 (22%), Positives = 127/313 (40%)
Query: 21 LSKQSKVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARELFDASTVADKGHI 80
LS+ S + A AIYA + +W A LE + G + + +T +
Sbjct: 547 LSRGS-IKTANAIYAHILSIFPTKKS-VWLKVAQLEKQHGTKETLDQTLEKATQKCPQYE 604
Query: 81 AAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQA 140
W +A + G++ KAR++LA+ KF G+E I+ +E++ N ARNL ++A
Sbjct: 605 NLWLMYAKEKWISGDVAKAREILAQAFKFNPGSENIWVAAVKIESEMNELRAARNLLKKA 664
Query: 141 TKCNPKSCASWI--AWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVWGIFEANMGFI 198
+ W+ A + E+ + L L E+ +Q P + W + E
Sbjct: 665 REIAGTE-RIWMKSALLERELGGDQKLEL-SLIEQGLQKYPNSFKLWLMKAQLEERQAIA 722
Query: 199 DKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGW 258
+ + N + Q+ L + ++ + R+ ++ A+ P + VWI
Sbjct: 723 NHQNNQNNQNNQNNQNNQNN-QNNNLQQISLTSIEIIRQTYKNATVKCPNNGSVWIEASR 781
Query: 259 MEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQRVGNLSAARRLFRSSLNINS 318
E + N + AR L E+A + T + L+ + E +GN A + + +
Sbjct: 782 FEKRNQNFNRARALLEQAKLKNPTDDDIF--LE-FVRFEDSLGNRKQAATILALGIQASP 838
Query: 319 QSYITWMTWAQLE 331
+S W +E
Sbjct: 839 KSGKLWAELIAME 851
Score = 139 (54.0 bits), Expect = 9.8e-06, P = 9.8e-06
Identities = 59/287 (20%), Positives = 119/287 (41%)
Query: 65 ARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLE 124
AR L + +I W A LE +KAR++L K + + I+ + A LE
Sbjct: 414 ARILLGRAVECVPDNIDLWLALANLE----TYEKAREVLNKARQALPSSSEIWISAAQLE 469
Query: 125 AKANRYEQARNLFRQATK--C----NPKSCASWIAWSQMEMQQENNLAARQLFERAVQAS 178
+ + + ++A K C N + WIA ++ + + + + + +
Sbjct: 470 ESQGKNDNVNKIIKKAIKSLCSGVMNVMNRDKWIAEAEKSEKNQYYVTCQAIIYETIGMG 529
Query: 179 PKNRFAWHVWGIFEA----NMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANL 234
++ +W + +A + G I + ++ P + +A LE ++ T
Sbjct: 530 IEDDDRKRIW-VIDAEECLSRGSIKTANAIYAHILSIFPTKKSVWLKVAQLEKQHGTKET 588
Query: 235 ARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWG 294
+ +A++ P+++ +W+ + +W G++ ARE+ +A + +E+ A
Sbjct: 589 LDQTLEKATQKCPQYENLWLMYAKEKWISGDVAKAREILAQAFKFNPGSENI---WVAAV 645
Query: 295 VLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAE 341
+E + L AAR L + + I I WM A LE + G + E
Sbjct: 646 KIESEMNELRAARNLLKKAREIAGTERI-WMKSALLERELGGDQKLE 691
Score = 134 (52.2 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 65/306 (21%), Positives = 129/306 (42%)
Query: 99 ARQLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQME 158
AR LL + ++ N ++ LA LE YE+AR + +A + P S WI+ +Q+E
Sbjct: 414 ARILLGRAVECVPDNIDLWLALANLET----YEKAREVLNKARQALPSSSEIWISAAQLE 469
Query: 159 MQQENNLAARQLFERAVQA------SPKNRFAWHVWGI-FEANMGFIDKGKKLLK-IGHA 210
Q N ++ ++A+++ + NR W E N ++ + + IG
Sbjct: 470 ESQGKNDNVNKIIKKAIKSLCSGVMNVMNRDKWIAEAEKSEKNQYYVTCQAIIYETIGMG 529
Query: 211 VNPRDPVLLQSLALLE-YKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTA 269
+ D + + E + A ++ I P + VW+ +E + G +T
Sbjct: 530 IEDDDRKRIWVIDAEECLSRGSIKTANAIYAHILSIFPTKKSVWLKVAQLEKQHGTKETL 589
Query: 270 RELYERALSIDSTTESAARCLQAWGVL--EQRV-GNLSAARRLFRSSLNINSQSYITWMT 326
+ E+A T+ + W + E+ + G+++ AR + + N S W+
Sbjct: 590 DQTLEKA------TQKCPQYENLWLMYAKEKWISGDVAKAREILAQAFKFNPGSENIWVA 643
Query: 327 WAQLEEDQGNSVRAEEIRNLYFQQRTEVVDDASWVMGFMDIIDPALDRIKQLLNLEKSSY 386
++E + N +RA RNL + R + W+ + + D+ +L +E+
Sbjct: 644 AVKIESEM-NELRAA--RNLLKKAREIAGTERIWMKSALLERELGGDQKLELSLIEQGLQ 700
Query: 387 KEPSAY 392
K P+++
Sbjct: 701 KYPNSF 706
Score = 131 (51.2 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 89/391 (22%), Positives = 163/391 (41%)
Query: 8 PEDGRPYVALGKVLSKQSKVAEARAIYAKGSQATQGENPYIWQCWAVLEN-KLGNIGKAR 66
P+ ++A K+ K+ +AR I A QA + E P + W +EN L A+
Sbjct: 301 PKHSPSWIAAAKLEVLAGKIVDARKIIA---QACK-ECPTSEEVW--IENANLQTPDNAK 354
Query: 67 ELFDASTVADKGH-IAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEA 125
+ A V H + W A LE +Q +KK ++L + L+F + +++ LE
Sbjct: 355 IVL-AQAVRVIPHSVKIWLYAANLE-KQLKMKK--RVLRRALEFIPTSVKLWKEAVELEE 410
Query: 126 KANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAW 185
E AR L +A +C P + W+A + +E ++ AR++ +A QA P + W
Sbjct: 411 P----EDARILLGRAVECVPDNIDLWLALANLETYEK----AREVLNKARQALPSSSEIW 462
Query: 186 HVWGIFEANMGFIDKGKKLLK---------IGHAVNPRDPVLLQSLALLEYKY--STANL 234
E + G D K++K + + +N RD + ++ + +Y + +
Sbjct: 463 ISAAQLEESQGKNDNVNKIIKKAIKSLCSGVMNVMN-RDKWIAEAEKSEKNQYYVTCQAI 521
Query: 235 ARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWG 294
+ E D R + +W+ G++ TA +Y LSI T +S L+
Sbjct: 522 IYETIGMGIEDDDRKR-IWVIDAEECLSRGSIKTANAIYAHILSIFPTKKSV--WLKV-A 577
Query: 295 VLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEIRNLYFQQRTEV 354
LE++ G + + Q W+ +A+ + G+ +A EI F+
Sbjct: 578 QLEKQHGTKETLDQTLEKATQKCPQYENLWLMYAKEKWISGDVAKAREILAQAFKFNPG- 636
Query: 355 VDDASWVMGFMDIIDPALDRIKQLLNLEKSS 385
+ WV I+ ++ ++ NL K +
Sbjct: 637 -SENIWVAAVK--IESEMNELRAARNLLKKA 664
>TAIR|locus:2152965 [details] [associations]
symbol:AT5G41770 species:3702 "Arabidopsis thaliana"
[GO:0005622 "intracellular" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006396 "RNA processing" evidence=IEA;ISS]
InterPro:IPR003107 InterPro:IPR011990 InterPro:IPR013026
Pfam:PF02184 PROSITE:PS50293 SMART:SM00386 EMBL:CP002688
GO:GO:0005622 GO:GO:0006396 Gene3D:1.25.40.10 KO:K12869 OMA:KFTFAKI
IPI:IPI00530971 RefSeq:NP_198992.2 UniGene:At.9341
ProteinModelPortal:F4JZX8 SMR:F4JZX8 PRIDE:F4JZX8
EnsemblPlants:AT5G41770.1 GeneID:834182 KEGG:ath:AT5G41770
Uniprot:F4JZX8
Length = 705
Score = 163 (62.4 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 67/292 (22%), Positives = 126/292 (43%)
Query: 64 KARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALL 123
+ R+ F+ + +I W +A E Q + +AR + + ++ N ++ A
Sbjct: 76 RRRKEFEDQIRRARWNIQVWVKYAQWEESQKDYARARSVWERAIEGDYRNHTLWLKYAEF 135
Query: 124 EAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRF 183
E K ARN++ +A P+ W + ME N ARQ+FER + SP +
Sbjct: 136 EMKNKFVNSARNVWDRAVTLLPRVDQLWYKYIHMEEILGNIAGARQIFERWMDWSPDQQ- 194
Query: 184 AWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRAS 243
W + FE I++ + + + +P+ ++ A E K R ++ RA+
Sbjct: 195 GWLSFIKFELRYNEIERARTIYERFVLCHPKVSAYIR-YAKFEMKGGEVARCRSVYERAT 253
Query: 244 EI---DPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCL-QAWGVLEQR 299
E D + +++A+ E + ++ AR +Y+ AL D + A L + + E++
Sbjct: 254 EKLADDEEAEILFVAFAEFEERCKEVERARFIYKFAL--DHIPKGRAEDLYRKFVAFEKQ 311
Query: 300 VGN-------LSAARRL-FRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEI 343
G+ + RR + + + +Y +W + +LEE GN R EI
Sbjct: 312 YGDKEGIEDAIVGKRRFQYEDEVRKSPSNYDSWFDYVRLEESVGNKDRIREI 363
Score = 136 (52.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 52/236 (22%), Positives = 109/236 (46%)
Query: 49 WQCWAVLENKLGNIGKARELFDASTV----ADKG-----HIAAWHGWAVLE-LRQGNIKK 98
W + LE +GN + RE+++ + A++ +I W +A+ E + +I++
Sbjct: 344 WFDYVRLEESVGNKDRIREIYERAIANVPPAEEKRYWQRYIYLWINYALFEEIETEDIER 403
Query: 99 ARQLLAKGLKFCGGNEYIYQTLALLEAKAN----RYEQARNLFRQATKCNPKSCASWIAW 154
R + + LK +++ + + LL A+ AR + A PK + +
Sbjct: 404 TRDVYRECLKLIPHSKFSFAKIWLLAAQFEIRQLNLTGARQILGNAIGKAPKD-KIFKKY 462
Query: 155 SQMEMQQENNLAARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPR 214
++E+Q N R+L+ER ++ SP+N +AW + E ++ ++ + + ++ +
Sbjct: 463 IEIELQLGNMDRCRKLYERYLEWSPENCYAWSKYAELERSLVETERARAIFELAISQPAL 522
Query: 215 D-PVLLQSLALLEYKYSTANL--ARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLD 267
D P LL A ++++ S L R L+ R + +H VW+++ E L+
Sbjct: 523 DMPELLWK-AYIDFEISEGELERTRALYERLLD-RTKHYKVWVSFAKFEASAAELE 576
Score = 135 (52.6 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 58/269 (21%), Positives = 121/269 (44%)
Query: 47 YIWQCWAVLEN-KLGNIGKARELF-DASTVADKGHIAAWHGW---AVLELRQGNIKKARQ 101
Y+W +A+ E + +I + R+++ + + + W A E+RQ N+ ARQ
Sbjct: 385 YLWINYALFEEIETEDIERTRDVYRECLKLIPHSKFSFAKIWLLAAQFEIRQLNLTGARQ 444
Query: 102 LLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQ 161
+L + ++ I++ +E + ++ R L+ + + +P++C +W ++++E
Sbjct: 445 ILGNAIGKAPKDK-IFKKYIEIELQLGNMDRCRKLYERYLEWSPENCYAWSKYAELERSL 503
Query: 162 ENNLAARQLFERAVQ--ASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLL 219
AR +FE A+ A W + FE + G +++ + L + + R
Sbjct: 504 VETERARAIFELAISQPALDMPELLWKAYIDFEISEGELERTRALYE---RLLDRTKHYK 560
Query: 220 QSLALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSI 279
++ +++ S A L +E + + + V +E K+ + AR +++RA +
Sbjct: 561 VWVSFAKFEASAAELEED----ENEDEDQEEDV------IEHKKDCIKRARAIFDRANTY 610
Query: 280 --DSTTE---SAARCLQAWGVLEQRVGNL 303
DST E A L+ W +E GNL
Sbjct: 611 YKDSTPELKEERATLLEDWLNMESSFGNL 639
Score = 126 (49.4 bits), Expect = 0.00016, P = 0.00016
Identities = 80/374 (21%), Positives = 155/374 (41%)
Query: 7 WPEDGRPYVALGKVLSKQSKVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKAR 66
W D + +++ K + +++ AR IY + + YI +A E K G + + R
Sbjct: 189 WSPDQQGWLSFIKFELRYNEIERARTIYERFVLCHPKVSAYIR--YAKFEMKGGEVARCR 246
Query: 67 ELFDAST--VADKGHIAA-WHGWAVLELRQGNIKKARQLLAKGLKFC--GGNEYIYQTLA 121
+++ +T +AD + +A E R +++AR + L G E +Y+
Sbjct: 247 SVYERATEKLADDEEAEILFVAFAEFEERCKEVERARFIYKFALDHIPKGRAEDLYRKFV 306
Query: 122 LLEAKANRYE--------QARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFER 173
E + E + R + + +P + SW + ++E N R+++ER
Sbjct: 307 AFEKQYGDKEGIEDAIVGKRRFQYEDEVRKSPSNYDSWFDYVRLEESVGNKDRIREIYER 366
Query: 174 AVQASP---KNRFAW----HVW---GIFEA-NMGFIDKGKKLLKIGHAVNPRDPVLLQSL 222
A+ P + R+ W ++W +FE I++ + + + + P +
Sbjct: 367 AIANVPPAEEKRY-WQRYIYLWINYALFEEIETEDIERTRDVYRECLKLIPHSKFSFAKI 425
Query: 223 ALL--EYKYSTANL--ARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALS 278
LL +++ NL AR++ A P+ + ++ + +E + GN+D R+LYER L
Sbjct: 426 WLLAAQFEIRQLNLTGARQILGNAIGKAPKDK-IFKKYIEIELQLGNMDRCRKLYERYLE 484
Query: 279 IDSTTESAARCLQAWGV---LEQRVGNLSAARRLFRSSLNINSQSY--ITWMTWAQLEED 333
S C AW LE+ + AR +F +++ + + W + E
Sbjct: 485 W-----SPENCY-AWSKYAELERSLVETERARAIFELAISQPALDMPELLWKAYIDFEIS 538
Query: 334 QGNSVRAEEIRNLY 347
+G E R LY
Sbjct: 539 EGE---LERTRALY 549
>UNIPROTKB|Q2KJJ0 [details] [associations]
symbol:PRPF6 "Pre-mRNA-processing factor 6" species:9913
"Bos taurus" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] [GO:0071001 "U4/U6
snRNP" evidence=IEA] [GO:0050681 "androgen receptor binding"
evidence=IEA] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0043021
"ribonucleoprotein complex binding" evidence=IEA] [GO:0006403 "RNA
localization" evidence=IEA] [GO:0005682 "U5 snRNP" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003713 "transcription
coactivator activity" evidence=IEA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IEA] InterPro:IPR003107 InterPro:IPR010491
InterPro:IPR011990 InterPro:IPR013026 Pfam:PF06424 PROSITE:PS50293
SMART:SM00386 GO:GO:0016607 GO:GO:0045944 GO:GO:0005682
GO:GO:0003723 GO:GO:0003713 eggNOG:COG0457 Gene3D:1.25.40.10
GO:GO:0043021 GO:GO:0000398 GO:GO:0071013 GO:GO:0046540
GO:GO:0006403 GO:GO:0071001 HOGENOM:HOG000116247 KO:K12855
OMA:IWLRAAY InterPro:IPR027108 PANTHER:PTHR11246:SF1
EMBL:AAFC03042419 EMBL:BC105318 IPI:IPI00702400
RefSeq:NP_001039840.1 UniGene:Bt.40556 ProteinModelPortal:Q2KJJ0
STRING:Q2KJJ0 Ensembl:ENSBTAT00000015480 GeneID:534228
KEGG:bta:534228 CTD:24148 GeneTree:ENSGT00550000075016
HOVERGEN:HBG023330 InParanoid:Q2KJJ0 OrthoDB:EOG4FTVZW
NextBio:20876316 ArrayExpress:Q2KJJ0 Uniprot:Q2KJJ0
Length = 941
Score = 164 (62.8 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 61/297 (20%), Positives = 119/297 (40%)
Query: 48 IWQCWAVLENKLGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGL 107
+W A + G++ AR + + A+ W LE ++AR+LLAK
Sbjct: 610 LWLMGAKSKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENNEYERARRLLAKA- 668
Query: 108 KFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAA 167
+ ++ LE A+ L +A K W+ Q+E Q+E A
Sbjct: 669 RSSAPTARVFMKSVKLEWVLGNLVAAQELCEEALKHYEDFPKLWMMKGQIEEQEELVEKA 728
Query: 168 RQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEY 227
R+ + + ++ P + W + E +G + + + +L+ NP++P L LEY
Sbjct: 729 REAYNQGLKKCPHSTPLWLLLSRLEEKVGQLTRARAILEKSRLKNPKNPGLWLESVRLEY 788
Query: 228 KYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAA 287
+ N+A L +A + P +W ++E + + + ++ + A
Sbjct: 789 RAGLKNIASTLMAKALQECPNSGVLWSEAIFLEARPQRKTKSVDALKKCEHDPHVLLAVA 848
Query: 288 RCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEIR 344
+ W E+++ + AR F ++ I+S W + + E G + EE+R
Sbjct: 849 KLF--WS--ERKI---TKAREWFHRTVKIDSDLGDAWAFFYKFELQHGTEEQREEVR 898
Score = 163 (62.4 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 63/268 (23%), Positives = 112/268 (41%)
Query: 8 PEDGRPYVALGKVLSKQSKVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARE 67
P ++A K+ S+ ++ AR + AK + ++ LE LGN+ A+E
Sbjct: 639 PNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVFMKS--VKLEWVLGNLVAAQE 696
Query: 68 LFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKA 127
L + + + W +E ++ ++KAR+ +GLK C + ++ L+ LE K
Sbjct: 697 LCEEALKHYEDFPKLWMMKGQIEEQEELVEKAREAYNQGLKKCPHSTPLWLLLSRLEEKV 756
Query: 128 NRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHV 187
+ +AR + ++ NPK+ W+ ++E + A L +A+Q P + W
Sbjct: 757 GQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNIASTLMAKALQECPNSGVLWSE 816
Query: 188 WGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDP 247
EA K LK DP +L ++A L + AR+ F R +ID
Sbjct: 817 AIFLEARPQRKTKSVDALKKCE----HDPHVLLAVAKLFWSERKITKAREWFHRTVKIDS 872
Query: 248 RHQPVWIAWGWMEWKEGNLDTARELYER 275
W + E + G + E+ R
Sbjct: 873 DLGDAWAFFYKFELQHGTEEQREEVRRR 900
Score = 159 (61.0 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 60/249 (24%), Positives = 104/249 (41%)
Query: 30 ARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARELFDASTV-ADKGHIAAWHGWAV 88
ARAIYA Q + +W A E G L + K + W A
Sbjct: 559 ARAIYAYALQVFPSKKS-VWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVL-WLMGAK 616
Query: 89 LELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSC 148
+ G++ AR +LA + +E I+ LE++ N YE+AR L +A P +
Sbjct: 617 SKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAP-TA 675
Query: 149 ASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIG 208
++ ++E N +AA++L E A++ W + G E ++K ++ G
Sbjct: 676 RVFMKSVKLEWVLGNLVAAQELCEEALKHYEDFPKLWMMKGQIEEQEELVEKAREAYNQG 735
Query: 209 HAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDT 268
P L L+ LE K AR + ++ +P++ +W+ +E++ G +
Sbjct: 736 LKKCPHSTPLWLLLSRLEEKVGQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNI 795
Query: 269 ARELYERAL 277
A L +AL
Sbjct: 796 ASTLMAKAL 804
Score = 154 (59.3 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 53/216 (24%), Positives = 87/216 (40%)
Query: 128 NRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHV 187
N E AR ++ A + P + W+ + E + L +RAV PK W +
Sbjct: 554 NALECARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVLWLM 613
Query: 188 WGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDP 247
+ G + + +L + NP + + LE + + AR+L +A P
Sbjct: 614 GAKSKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAP 673
Query: 248 RHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQRVGNLSAAR 307
+ V++ +EW GNL A+EL E AL E + G +E++ + AR
Sbjct: 674 TAR-VFMKSVKLEWVLGNLVAAQELCEEALK---HYEDFPKLWMMKGQIEEQEELVEKAR 729
Query: 308 RLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEI 343
+ L S W+ ++LEE G RA I
Sbjct: 730 EAYNQGLKKCPHSTPLWLLLSRLEEKVGQLTRARAI 765
Score = 151 (58.2 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 64/255 (25%), Positives = 99/255 (38%)
Query: 27 VAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARELFDASTVADKGHIAAWHGW 86
V AR+I A QA IW LE++ +AR L A + +
Sbjct: 624 VPAARSILALAFQANPNSEE-IWLAAVKLESENNEYERARRLL-AKARSSAPTARVFMKS 681
Query: 87 AVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPK 146
LE GN+ A++L + LK ++ +E + E+AR + Q K P
Sbjct: 682 VKLEWVLGNLVAAQELCEEALKHYEDFPKLWMMKGQIEEQEELVEKAREAYNQGLKKCPH 741
Query: 147 SCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLK 206
S W+ S++E + AR + E++ +PKN W E G + L+
Sbjct: 742 STPLWLLLSRLEEKVGQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNIASTLMA 801
Query: 207 IGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNL 266
P VL LE + + ++ E DP H V +A + W E +
Sbjct: 802 KALQECPNSGVLWSEAIFLEARPQRKTKSVDALKKC-EHDP-H--VLLAVAKLFWSERKI 857
Query: 267 DTARELYERALSIDS 281
ARE + R + IDS
Sbjct: 858 TKAREWFHRTVKIDS 872
Score = 141 (54.7 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 64/277 (23%), Positives = 121/277 (43%)
Query: 59 LGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQ 118
+ +I KAR L + + H AW A LE G ++ AR L+ KG + C +E ++
Sbjct: 288 INDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWL 347
Query: 119 TLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQAS 178
A L+ + A+ + QA + P+S +I +++E A +++ +A++
Sbjct: 348 EAARLQPG----DTAKAVVAQAVRHLPQSVRIYIRAAELETDIR---AKKRVLRKALEHV 400
Query: 179 PKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVN--PRDPVLLQSLALLEYKYSTANLAR 236
P + W +A + + + + AV P L +LA LE T AR
Sbjct: 401 PNSVRLW------KAAVELEEPEDARIMLSRAVECCPTSVELWLALARLE----TYENAR 450
Query: 237 KLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERAL-SIDSTTESAARCLQAW-G 294
K+ +A E P + +WI +E GN ++ +RA+ S+ + R + W
Sbjct: 451 KVLNKARENIPTDRHIWITAAKLEEANGNTQMVEKIIDRAITSLRANGVEINR--EQWIQ 508
Query: 295 VLEQ--RVGNLSAARRLFRSSLNINSQSYITWMTWAQ 329
E+ + G+++ + + R+ + I + TW +
Sbjct: 509 DAEECDKAGSVATCQAVMRAVIGIGIEEEDRKHTWME 545
Score = 140 (54.3 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 55/237 (23%), Positives = 99/237 (41%)
Query: 99 ARQLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQME 158
AR + A L+ + ++ A E E L ++A PK+ W+ ++ +
Sbjct: 559 ARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVLWLMGAKSK 618
Query: 159 MQQENNLAARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVL 218
+ AAR + A QA+P + W E+ ++ ++LL + P V
Sbjct: 619 WLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVF 678
Query: 219 LQSLALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALS 278
++S+ L E+ A++L A + +W+ G +E +E ++ ARE Y + L
Sbjct: 679 MKSVKL-EWVLGNLVAAQELCEEALKHYEDFPKLWMMKGQIEEQEELVEKAREAYNQGLK 737
Query: 279 IDSTTESAARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQG 335
S L LE++VG L+ AR + S N ++ W+ +LE G
Sbjct: 738 --KCPHSTPLWLLL-SRLEEKVGQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAG 791
Score = 137 (53.3 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 58/230 (25%), Positives = 96/230 (41%)
Query: 167 ARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLE 226
AR ++ A+Q P + W FE N G + + LL+ A P+ VL A +
Sbjct: 559 ARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVLWLMGAKSK 618
Query: 227 YKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESA 286
+ AR + A + +P + +W+A +E + + AR L +A S T
Sbjct: 619 WLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPT---- 674
Query: 287 ARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEIRNL 346
AR LE +GNL AA+ L +L WM Q+EE + +A E N
Sbjct: 675 ARVFMKSVKLEWVLGNLVAAQELCEEALKHYEDFPKLWMMKGQIEEQEELVEKAREAYNQ 734
Query: 347 YFQQRTEVVDDASWVMGFMDIIDPALDRIKQLLN-LEKSSYKEPSAYSPG 395
++ W++ + ++ + ++ + LEKS K P +PG
Sbjct: 735 GLKKCPH--STPLWLL--LSRLEEKVGQLTRARAILEKSRLKNPK--NPG 778
Score = 124 (48.7 bits), Expect = 0.00038, P = 0.00038
Identities = 58/269 (21%), Positives = 112/269 (41%)
Query: 86 W-AVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCN 144
W A +EL + + AR +L++ ++ C + ++ LA LE YE AR + +A +
Sbjct: 407 WKAAVELEEP--EDARIMLSRAVECCPTSVELWLALARLET----YENARKVLNKARENI 460
Query: 145 PKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKN-----RFAWHVWGIFEANM-GFI 198
P WI +++E N ++ +RA+ + N R W + E + G +
Sbjct: 461 PTDRHIWITAAKLEEANGNTQMVEKIIDRAITSLRANGVEINREQW-IQDAEECDKAGSV 519
Query: 199 DKGKKLLK--IGHAVNPRDPV-LLQSLALLEYKYSTANLARKLFRRASEIDPRHQPVWIA 255
+ +++ IG + D A ++ AR ++ A ++ P + VW+
Sbjct: 520 ATCQAVMRAVIGIGIEEEDRKHTWMEDADSCVAHNALECARAIYAYALQVFPSKKSVWLR 579
Query: 256 WGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQRV-GNLSAARRLFRSSL 314
+ E G ++ L +RA++ E L G + + G++ AAR + +
Sbjct: 580 AAYFEKNHGTRESLEALLQRAVAHCPKAE----VLWLMGAKSKWLAGDVPAARSILALAF 635
Query: 315 NINSQSYITWMTWAQLEEDQGNSVRAEEI 343
N S W+ +LE + RA +
Sbjct: 636 QANPNSEEIWLAAVKLESENNEYERARRL 664
>UNIPROTKB|E2RPW8 [details] [associations]
symbol:PRPF6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IEA] InterPro:IPR003107
InterPro:IPR010491 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF06424 Pfam:PF13181 PROSITE:PS50293
SMART:SM00386 GO:GO:0005634 Gene3D:1.25.40.10 GO:GO:0000398
KO:K12855 OMA:IWLRAAY InterPro:IPR027108 PANTHER:PTHR11246:SF1
CTD:24148 GeneTree:ENSGT00550000075016 EMBL:AAEX03014173
EMBL:AAEX03014174 RefSeq:XP_534481.3 Ensembl:ENSCAFT00000020914
GeneID:477289 KEGG:cfa:477289 Uniprot:E2RPW8
Length = 941
Score = 164 (62.8 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 60/297 (20%), Positives = 119/297 (40%)
Query: 48 IWQCWAVLENKLGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGL 107
+W A + G++ AR + + A+ W LE ++AR+LLAK
Sbjct: 610 LWLMGAKSKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENNEYERARRLLAKA- 668
Query: 108 KFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAA 167
+ ++ LE A+ L +A + W+ Q+E Q+E A
Sbjct: 669 RSSAPTARVFMKSVKLEWVLGNIAAAQELCEEALRHYEDFPKLWMMKGQIEEQEELMERA 728
Query: 168 RQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEY 227
R+ + + ++ P + W + E +G + + + +L+ NP++P L LEY
Sbjct: 729 REAYNQGLKKCPHSTPLWLLLSRLEEKVGQLTRARAILEKSRLKNPKNPGLWLESVRLEY 788
Query: 228 KYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAA 287
+ N+A L +A + P +W ++E + + + ++ + A
Sbjct: 789 RAGLKNIANTLMAKALQECPNSGVLWSEAIFLEARPQRKTKSVDALKKCEHDPHVLLAVA 848
Query: 288 RCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEIR 344
+ W E+++ + AR F ++ I+S W + + E G + EE+R
Sbjct: 849 KLF--WS--ERKI---TKAREWFHRTVKIDSDLGDAWAFFYKFELQHGTEEQREEVR 898
Score = 163 (62.4 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 63/268 (23%), Positives = 112/268 (41%)
Query: 8 PEDGRPYVALGKVLSKQSKVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARE 67
P ++A K+ S+ ++ AR + AK + ++ LE LGNI A+E
Sbjct: 639 PNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVFMKS--VKLEWVLGNIAAAQE 696
Query: 68 LFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKA 127
L + + + W +E ++ +++AR+ +GLK C + ++ L+ LE K
Sbjct: 697 LCEEALRHYEDFPKLWMMKGQIEEQEELMERAREAYNQGLKKCPHSTPLWLLLSRLEEKV 756
Query: 128 NRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHV 187
+ +AR + ++ NPK+ W+ ++E + A L +A+Q P + W
Sbjct: 757 GQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNIANTLMAKALQECPNSGVLWSE 816
Query: 188 WGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDP 247
EA K LK DP +L ++A L + AR+ F R +ID
Sbjct: 817 AIFLEARPQRKTKSVDALKKCE----HDPHVLLAVAKLFWSERKITKAREWFHRTVKIDS 872
Query: 248 RHQPVWIAWGWMEWKEGNLDTARELYER 275
W + E + G + E+ R
Sbjct: 873 DLGDAWAFFYKFELQHGTEEQREEVRRR 900
Score = 153 (58.9 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 52/216 (24%), Positives = 87/216 (40%)
Query: 128 NRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHV 187
N E AR ++ A + P + W+ + E + L +RAV PK W +
Sbjct: 554 NALECARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVLWLM 613
Query: 188 WGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDP 247
+ G + + +L + NP + + LE + + AR+L +A P
Sbjct: 614 GAKSKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAP 673
Query: 248 RHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQRVGNLSAAR 307
+ V++ +EW GN+ A+EL E AL E + G +E++ + AR
Sbjct: 674 TAR-VFMKSVKLEWVLGNIAAAQELCEEALR---HYEDFPKLWMMKGQIEEQEELMERAR 729
Query: 308 RLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEI 343
+ L S W+ ++LEE G RA I
Sbjct: 730 EAYNQGLKKCPHSTPLWLLLSRLEEKVGQLTRARAI 765
Score = 151 (58.2 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 64/255 (25%), Positives = 99/255 (38%)
Query: 27 VAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARELFDASTVADKGHIAAWHGW 86
V AR+I A QA IW LE++ +AR L A + +
Sbjct: 624 VPAARSILALAFQANPNSEE-IWLAAVKLESENNEYERARRLL-AKARSSAPTARVFMKS 681
Query: 87 AVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPK 146
LE GNI A++L + L+ ++ +E + E+AR + Q K P
Sbjct: 682 VKLEWVLGNIAAAQELCEEALRHYEDFPKLWMMKGQIEEQEELMERAREAYNQGLKKCPH 741
Query: 147 SCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLK 206
S W+ S++E + AR + E++ +PKN W E G + L+
Sbjct: 742 STPLWLLLSRLEEKVGQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNIANTLMA 801
Query: 207 IGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNL 266
P VL LE + + ++ E DP H V +A + W E +
Sbjct: 802 KALQECPNSGVLWSEAIFLEARPQRKTKSVDALKKC-EHDP-H--VLLAVAKLFWSERKI 857
Query: 267 DTARELYERALSIDS 281
ARE + R + IDS
Sbjct: 858 TKAREWFHRTVKIDS 872
Score = 142 (55.0 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 58/230 (25%), Positives = 97/230 (42%)
Query: 167 ARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLE 226
AR ++ A+Q P + W FE N G + + LL+ A P+ VL A +
Sbjct: 559 ARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVLWLMGAKSK 618
Query: 227 YKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESA 286
+ AR + A + +P + +W+A +E + + AR L +A S T
Sbjct: 619 WLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPT---- 674
Query: 287 ARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEIRNL 346
AR LE +GN++AA+ L +L WM Q+EE + RA E N
Sbjct: 675 ARVFMKSVKLEWVLGNIAAAQELCEEALRHYEDFPKLWMMKGQIEEQEELMERAREAYNQ 734
Query: 347 YFQQRTEVVDDASWVMGFMDIIDPALDRIKQLLN-LEKSSYKEPSAYSPG 395
++ W++ + ++ + ++ + LEKS K P +PG
Sbjct: 735 GLKKCPH--STPLWLL--LSRLEEKVGQLTRARAILEKSRLKNPK--NPG 778
Score = 141 (54.7 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 55/237 (23%), Positives = 98/237 (41%)
Query: 99 ARQLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQME 158
AR + A L+ + ++ A E E L ++A PK+ W+ ++ +
Sbjct: 559 ARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVLWLMGAKSK 618
Query: 159 MQQENNLAARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVL 218
+ AAR + A QA+P + W E+ ++ ++LL + P V
Sbjct: 619 WLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVF 678
Query: 219 LQSLALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALS 278
++S+ L E+ A++L A +W+ G +E +E ++ ARE Y + L
Sbjct: 679 MKSVKL-EWVLGNIAAAQELCEEALRHYEDFPKLWMMKGQIEEQEELMERAREAYNQGLK 737
Query: 279 IDSTTESAARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQG 335
S L LE++VG L+ AR + S N ++ W+ +LE G
Sbjct: 738 --KCPHSTPLWLLL-SRLEEKVGQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAG 791
Score = 141 (54.7 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 64/277 (23%), Positives = 121/277 (43%)
Query: 59 LGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQ 118
+ +I KAR L + + H AW A LE G ++ AR L+ KG + C +E ++
Sbjct: 288 INDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWL 347
Query: 119 TLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQAS 178
A L+ + A+ + QA + P+S +I +++E A +++ +A++
Sbjct: 348 EAARLQPG----DTAKAVVAQAVRHLPQSVRIYIRAAELETDIR---AKKRVLRKALEHV 400
Query: 179 PKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVN--PRDPVLLQSLALLEYKYSTANLAR 236
P + W +A + + + + AV P L +LA LE T AR
Sbjct: 401 PNSVRLW------KAAVELEEPEDARIMLSRAVECCPTSVELWLALARLE----TYENAR 450
Query: 237 KLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERAL-SIDSTTESAARCLQAW-G 294
K+ +A E P + +WI +E GN ++ +RA+ S+ + R + W
Sbjct: 451 KVLNKARENIPTDRHIWITAAKLEEANGNTQMVEKIIDRAITSLRANGVEINR--EQWIQ 508
Query: 295 VLEQ--RVGNLSAARRLFRSSLNINSQSYITWMTWAQ 329
E+ + G+++ + + R+ + I + TW +
Sbjct: 509 DAEECDKAGSVATCQAVMRAVIGIGIEEEDRKHTWME 545
Score = 126 (49.4 bits), Expect = 0.00023, P = 0.00023
Identities = 67/321 (20%), Positives = 122/321 (38%)
Query: 5 DYWPEDGRPYVALGKVLSKQSKVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGK 64
+ W +D G V + Q A RA+ G + ++ ++ + + + +
Sbjct: 504 EQWIQDAEECDKAGSVATCQ---AVMRAVIGIGIEEEDRKHTWMEDADSCVAHNALECAR 560
Query: 65 ARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLE 124
A + K + W A E G + LL + + C E ++ A +
Sbjct: 561 AIYAYALQVFPSKKSV--WLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVLWLMGAKSK 618
Query: 125 AKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNR-F 183
A AR++ A + NP S W+A ++E + AR+L +A ++P R F
Sbjct: 619 WLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVF 678
Query: 184 AWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRAS 243
V E +G I ++L + P L +E + AR+ + +
Sbjct: 679 MKSVK--LEWVLGNIAAAQELCEEALRHYEDFPKLWMMKGQIEEQEELMERAREAYNQGL 736
Query: 244 EIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQRVGNL 303
+ P P+W+ +E K G L AR + E++ ++ L++ LE R G
Sbjct: 737 KKCPHSTPLWLLLSRLEEKVGQLTRARAILEKSRL--KNPKNPGLWLESVR-LEYRAGLK 793
Query: 304 SAARRLFRSSLNINSQSYITW 324
+ A L +L S + W
Sbjct: 794 NIANTLMAKALQECPNSGVLW 814
>ZFIN|ZDB-GENE-030131-2575 [details] [associations]
symbol:prpf6 "PRP6 pre-mRNA processing factor 6
homolog (S. cerevisiae)" species:7955 "Danio rerio" [GO:0005634
"nucleus" evidence=IEA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IEA] [GO:0006396 "RNA processing"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR003107 InterPro:IPR010491 InterPro:IPR011990
InterPro:IPR013026 Pfam:PF06424 PROSITE:PS50293 SMART:SM00386
ZFIN:ZDB-GENE-030131-2575 GO:GO:0005634 Gene3D:1.25.40.10
GO:GO:0000398 KO:K12855 InterPro:IPR027108 PANTHER:PTHR11246:SF1
CTD:24148 HOVERGEN:HBG023330 EMBL:BC056710 IPI:IPI00484708
RefSeq:NP_997820.1 UniGene:Dr.150395 ProteinModelPortal:Q6PH55
STRING:Q6PH55 GeneID:323855 KEGG:dre:323855 InParanoid:Q6PH55
NextBio:20808461 ArrayExpress:Q6PH55 Bgee:Q6PH55 Uniprot:Q6PH55
Length = 944
Score = 163 (62.4 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 65/268 (24%), Positives = 111/268 (41%)
Query: 8 PEDGRPYVALGKVLSKQSKVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARE 67
P ++A K+ S+ ++ AR + AK + ++ LE LGNI A E
Sbjct: 642 PNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVFMKS--VRLEWVLGNIEAAHE 699
Query: 68 LFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKA 127
L + + W +E + +I +AR+ +GLK C + ++ L+ LE K
Sbjct: 700 LCTEALKHYEDFPKLWMMRGQIEEQSESIDRAREAYNQGLKKCPHSMSLWLLLSRLEEKV 759
Query: 128 NRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHV 187
+ +AR + +A NP+S W+ ++E + A L +A+Q P + W
Sbjct: 760 GQLTRARAILEKARLKNPQSPELWLESVRLEYRAGLKNIANTLMAKALQECPNSGILWSE 819
Query: 188 WGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDP 247
EA K LK DP +L ++A L + AR+ F R +I+P
Sbjct: 820 AVFLEARPQRKTKSVDALKKCE----HDPHVLLAVAKLFWSERKITKAREWFLRTVKIEP 875
Query: 248 RHQPVWIAWGWMEWKEGNLDTARELYER 275
W + E + G + E+ +R
Sbjct: 876 DLGDAWGFFYKFELQHGTEEQQHEVKKR 903
Score = 157 (60.3 bits), Expect = 9.8e-08, P = 9.8e-08
Identities = 57/242 (23%), Positives = 102/242 (42%)
Query: 94 GNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIA 153
G ++ AR + A L+ + ++ A E E L ++A PK+ W+
Sbjct: 557 GALECARAIYAHALQVFPSKKSVWLRAAYFEKNNGTRESLEALLQRAVAHCPKAEVLWLM 616
Query: 154 WSQMEMQQENNLAARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNP 213
++ + + AAR + A QA+P + W E+ ++ ++LL + P
Sbjct: 617 GAKSKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAP 676
Query: 214 RDPVLLQSLALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELY 273
V ++S+ L E+ A +L A + +W+ G +E + ++D ARE Y
Sbjct: 677 TARVFMKSVRL-EWVLGNIEAAHELCTEALKHYEDFPKLWMMRGQIEEQSESIDRAREAY 735
Query: 274 ERALSIDSTTESAARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEED 333
+ L + S L LE++VG L+ AR + + N QS W+ +LE
Sbjct: 736 NQGLKKCPHSMSLWLLLSR---LEEKVGQLTRARAILEKARLKNPQSPELWLESVRLEYR 792
Query: 334 QG 335
G
Sbjct: 793 AG 794
Score = 154 (59.3 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 50/213 (23%), Positives = 86/213 (40%)
Query: 131 EQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVWGI 190
E AR ++ A + P + W+ + E + L +RAV PK W +
Sbjct: 560 ECARAIYAHALQVFPSKKSVWLRAAYFEKNNGTRESLEALLQRAVAHCPKAEVLWLMGAK 619
Query: 191 FEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDPRHQ 250
+ G + + +L + NP + + LE + + AR+L +A P +
Sbjct: 620 SKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTAR 679
Query: 251 PVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQRVGNLSAARRLF 310
V++ +EW GN++ A EL AL E + G +E++ ++ AR +
Sbjct: 680 -VFMKSVRLEWVLGNIEAAHELCTEALK---HYEDFPKLWMMRGQIEEQSESIDRAREAY 735
Query: 311 RSSLNINSQSYITWMTWAQLEEDQGNSVRAEEI 343
L S W+ ++LEE G RA I
Sbjct: 736 NQGLKKCPHSMSLWLLLSRLEEKVGQLTRARAI 768
Score = 152 (58.6 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 67/276 (24%), Positives = 108/276 (39%)
Query: 3 CIDYWPEDGRPYVALGKVLSKQSKVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNI 62
C W ED V+ G + ARAIYA Q + +W A E G
Sbjct: 542 CKHTWMEDADSCVSHGALEC-------ARAIYAHALQVFPSKKS-VWLRAAYFEKNNGTR 593
Query: 63 GKARELFDASTV-ADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLA 121
L + K + W A + G++ AR +LA + +E I+
Sbjct: 594 ESLEALLQRAVAHCPKAEVL-WLMGAKSKWLAGDVPAARSILALAFQANPNSEEIWLAAV 652
Query: 122 LLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKN 181
LE++ N YE+AR L +A P + ++ ++E N AA +L A++
Sbjct: 653 KLESENNEYERARRLLAKARSSAP-TARVFMKSVRLEWVLGNIEAAHELCTEALKHYEDF 711
Query: 182 RFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRR 241
W + G E ID+ ++ G P L L+ LE K AR + +
Sbjct: 712 PKLWMMRGQIEEQSESIDRAREAYNQGLKKCPHSMSLWLLLSRLEEKVGQLTRARAILEK 771
Query: 242 ASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERAL 277
A +P+ +W+ +E++ G + A L +AL
Sbjct: 772 ARLKNPQSPELWLESVRLEYRAGLKNIANTLMAKAL 807
Score = 142 (55.0 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 78/342 (22%), Positives = 135/342 (39%)
Query: 15 VALGKVLSKQSKVAEARAIYAKGSQATQGENPYIWQCWAVLE---NKLGNIGKARELFDA 71
V L K + + +AR + ++ + + +W A LE N + KARE
Sbjct: 407 VRLWKTAVELEEPEDARIMLSRAVECCP-TSVELWLALARLETYENARRVLNKARE---- 461
Query: 72 STVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEY-IYQTLALLEA----K 126
+ D+ HI W A LE GN + +++ + + N I + + +A K
Sbjct: 462 NIPTDR-HI--WITAAKLEEANGNTQMVEKIIDRAITSLRANGVEINREQWIQDAEECDK 518
Query: 127 ANRYEQARNLFRQATKCN--PKSCA-SWIAWSQMEMQQENNLAARQLFERAVQASPKNRF 183
A +++ R + C +W+ + + AR ++ A+Q P +
Sbjct: 519 AGSVVTCQSVIRAVIGIGIEEEDCKHTWMEDADSCVSHGALECARAIYAHALQVFPSKKS 578
Query: 184 AWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRAS 243
W FE N G + + LL+ A P+ VL A ++ AR + A
Sbjct: 579 VWLRAAYFEKNNGTRESLEALLQRAVAHCPKAEVLWLMGAKSKWLAGDVPAARSILALAF 638
Query: 244 EIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQRVGNL 303
+ +P + +W+A +E + + AR L +A S T + ++ LE +GN+
Sbjct: 639 QANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVFMKSVR----LEWVLGNI 694
Query: 304 SAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEIRN 345
AA L +L WM Q+EE + RA E N
Sbjct: 695 EAAHELCTEALKHYEDFPKLWMMRGQIEEQSESIDRAREAYN 736
Score = 140 (54.3 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 60/254 (23%), Positives = 100/254 (39%)
Query: 27 VAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARELFDASTVADKGHIAAWHGW 86
V AR+I A QA IW LE++ +AR L A + +
Sbjct: 627 VPAARSILALAFQANPNSEE-IWLAAVKLESENNEYERARRLL-AKARSSAPTARVFMKS 684
Query: 87 AVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPK 146
LE GNI+ A +L + LK ++ +E ++ ++AR + Q K P
Sbjct: 685 VRLEWVLGNIEAAHELCTEALKHYEDFPKLWMMRGQIEEQSESIDRAREAYNQGLKKCPH 744
Query: 147 SCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLK 206
S + W+ S++E + AR + E+A +P++ W E G + L+
Sbjct: 745 SMSLWLLLSRLEEKVGQLTRARAILEKARLKNPQSPELWLESVRLEYRAGLKNIANTLMA 804
Query: 207 IGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNL 266
P +L LE + + ++ E DP H V +A + W E +
Sbjct: 805 KALQECPNSGILWSEAVFLEARPQRKTKSVDALKKC-EHDP-H--VLLAVAKLFWSERKI 860
Query: 267 DTARELYERALSID 280
ARE + R + I+
Sbjct: 861 TKAREWFLRTVKIE 874
Score = 140 (54.3 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 72/328 (21%), Positives = 129/328 (39%)
Query: 5 DYWPEDGRPYVALGKVLSKQSKVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGK 64
+ W +D G V++ QS + RA+ G + ++ ++ + + + G +
Sbjct: 507 EQWIQDAEECDKAGSVVTCQSVI---RAVIGIGIEEEDCKHTWMEDADSCVSH--GALEC 561
Query: 65 ARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLE 124
AR ++ + + W A E G + LL + + C E ++ A +
Sbjct: 562 ARAIYAHALQVFPSKKSVWLRAAYFEKNNGTRESLEALLQRAVAHCPKAEVLWLMGAKSK 621
Query: 125 AKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNR-F 183
A AR++ A + NP S W+A ++E + AR+L +A ++P R F
Sbjct: 622 WLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVF 681
Query: 184 AWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRAS 243
V E +G I+ +L P L +E + + + AR+ + +
Sbjct: 682 MKSVR--LEWVLGNIEAAHELCTEALKHYEDFPKLWMMRGQIEEQSESIDRAREAYNQGL 739
Query: 244 EIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQRVGNL 303
+ P +W+ +E K G L AR + E+A +S L++ LE R G
Sbjct: 740 KKCPHSMSLWLLLSRLEEKVGQLTRARAILEKARL--KNPQSPELWLESVR-LEYRAGLK 796
Query: 304 SAARRLFRSSLNINSQSYITWMTWAQLE 331
+ A L +L S I W LE
Sbjct: 797 NIANTLMAKALQECPNSGILWSEAVFLE 824
Score = 129 (50.5 bits), Expect = 0.00011, P = 0.00011
Identities = 53/220 (24%), Positives = 96/220 (43%)
Query: 59 LGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQ 118
+ +I KAR L + + H AW A LE G ++ AR L+ KG + C +E ++
Sbjct: 291 ISDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWL 350
Query: 119 TLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQAS 178
A L+ + A+ + QA + P+S +I +++E A +++ +A++
Sbjct: 351 EAARLQPG----DTAKAVVAQAVRHLPQSVRIYIRAAELETDIR---AKKRVLRKALENV 403
Query: 179 PKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKL 238
K+ W E + + +L P L +LA LE T AR++
Sbjct: 404 SKSVRLWKTAVELEEP----EDARIMLSRAVECCPTSVELWLALARLE----TYENARRV 455
Query: 239 FRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALS 278
+A E P + +WI +E GN ++ +RA++
Sbjct: 456 LNKARENIPTDRHIWITAAKLEEANGNTQMVEKIIDRAIT 495
>RGD|1307103 [details] [associations]
symbol:Prpf6 "PRP6 pre-mRNA processing factor 6 homolog (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0000244
"assembly of spliceosomal tri-snRNP" evidence=ISO] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA;ISO] [GO:0003723
"RNA binding" evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005682 "U5 snRNP" evidence=IEA;ISO] [GO:0006403 "RNA
localization" evidence=IEA;ISO] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0043021 "ribonucleoprotein complex binding"
evidence=IEA;ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0046540
"U4/U6 x U5 tri-snRNP complex" evidence=IEA;ISO] [GO:0050681
"androgen receptor binding" evidence=IEA;ISO] [GO:0071001 "U4/U6
snRNP" evidence=IEA;ISO] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR003107 InterPro:IPR010491
InterPro:IPR011990 InterPro:IPR013026 Pfam:PF06424 PROSITE:PS50293
SMART:SM00386 RGD:1307103 GO:GO:0016607 GO:GO:0045944 GO:GO:0005682
GO:GO:0003723 GO:GO:0003713 eggNOG:COG0457 Gene3D:1.25.40.10
GO:GO:0043021 GO:GO:0000398 GO:GO:0071013 GO:GO:0046540
GO:GO:0006403 GO:GO:0071001 HOGENOM:HOG000116247 KO:K12855
OMA:IWLRAAY InterPro:IPR027108 PANTHER:PTHR11246:SF1 CTD:24148
GeneTree:ENSGT00550000075016 HOVERGEN:HBG023330 OrthoDB:EOG4FTVZW
EMBL:CH474066 EMBL:BC128779 IPI:IPI00368842 RefSeq:NP_001073234.1
UniGene:Rn.17062 ProteinModelPortal:A1A5S1 STRING:A1A5S1
Ensembl:ENSRNOT00000021722 GeneID:366276 KEGG:rno:366276
UCSC:RGD:1307103 InParanoid:A1A5S1 NextBio:689115
Genevestigator:A1A5S1 Uniprot:A1A5S1
Length = 941
Score = 162 (62.1 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 65/269 (24%), Positives = 113/269 (42%)
Query: 8 PEDGRPYVALGKVLSKQSKVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARE 67
P ++A K+ S+ ++ AR + AK + ++ LE LGNI A+E
Sbjct: 639 PNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVFMKS--VKLEWVLGNITAAQE 696
Query: 68 LFDASTVADKGHIAAWHGWAVLELRQGNI-KKARQLLAKGLKFCGGNEYIYQTLALLEAK 126
L + + + W +E QG + ++AR+ +GLK C + ++ L+ LE K
Sbjct: 697 LCEEALRHYEDFPKLWMMKGQIE-EQGELMERAREAYNQGLKKCPHSTPLWLLLSRLEEK 755
Query: 127 ANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWH 186
+ +AR + ++ NPK+ W+ ++E + A L +A+Q P + W
Sbjct: 756 IGQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNIANTLMAKALQECPNSGILWS 815
Query: 187 VWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEID 246
EA K LK DP +L ++A L + AR+ F R +ID
Sbjct: 816 EAVFLEARPQRKTKSVDALKKCE----HDPHVLLAVAKLFWSERKITKAREWFHRTVKID 871
Query: 247 PRHQPVWIAWGWMEWKEGNLDTARELYER 275
W + E + G + E+ +R
Sbjct: 872 SDLGDAWAFFYKFELQHGTEEQQEEVRKR 900
Score = 160 (61.4 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 60/297 (20%), Positives = 118/297 (39%)
Query: 48 IWQCWAVLENKLGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGL 107
+W A + G++ AR + + A+ W LE ++AR+LLAK
Sbjct: 610 LWLMGAKSKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENNEYERARRLLAKA- 668
Query: 108 KFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAA 167
+ ++ LE A+ L +A + W+ Q+E Q E A
Sbjct: 669 RSSAPTARVFMKSVKLEWVLGNITAAQELCEEALRHYEDFPKLWMMKGQIEEQGELMERA 728
Query: 168 RQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEY 227
R+ + + ++ P + W + E +G + + + +L+ NP++P L LEY
Sbjct: 729 REAYNQGLKKCPHSTPLWLLLSRLEEKIGQLTRARAILEKSRLKNPKNPGLWLESVRLEY 788
Query: 228 KYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAA 287
+ N+A L +A + P +W ++E + + + ++ + A
Sbjct: 789 RAGLKNIANTLMAKALQECPNSGILWSEAVFLEARPQRKTKSVDALKKCEHDPHVLLAVA 848
Query: 288 RCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEIR 344
+ W E+++ + AR F ++ I+S W + + E G + EE+R
Sbjct: 849 KLF--WS--ERKI---TKAREWFHRTVKIDSDLGDAWAFFYKFELQHGTEEQQEEVR 898
Score = 152 (58.6 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 52/216 (24%), Positives = 87/216 (40%)
Query: 128 NRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHV 187
N E AR ++ A + P + W+ + E + L +RAV PK W +
Sbjct: 554 NALECARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVLWLM 613
Query: 188 WGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDP 247
+ G + + +L + NP + + LE + + AR+L +A P
Sbjct: 614 GAKSKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAP 673
Query: 248 RHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQRVGNLSAAR 307
+ V++ +EW GN+ A+EL E AL E + G +E++ + AR
Sbjct: 674 TAR-VFMKSVKLEWVLGNITAAQELCEEALR---HYEDFPKLWMMKGQIEEQGELMERAR 729
Query: 308 RLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEI 343
+ L S W+ ++LEE G RA I
Sbjct: 730 EAYNQGLKKCPHSTPLWLLLSRLEEKIGQLTRARAI 765
Score = 151 (58.2 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 63/255 (24%), Positives = 99/255 (38%)
Query: 27 VAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARELFDASTVADKGHIAAWHGW 86
V AR+I A QA IW LE++ +AR L A + +
Sbjct: 624 VPAARSILALAFQANPNSEE-IWLAAVKLESENNEYERARRLL-AKARSSAPTARVFMKS 681
Query: 87 AVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPK 146
LE GNI A++L + L+ ++ +E + E+AR + Q K P
Sbjct: 682 VKLEWVLGNITAAQELCEEALRHYEDFPKLWMMKGQIEEQGELMERAREAYNQGLKKCPH 741
Query: 147 SCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLK 206
S W+ S++E + AR + E++ +PKN W E G + L+
Sbjct: 742 STPLWLLLSRLEEKIGQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNIANTLMA 801
Query: 207 IGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNL 266
P +L LE + + ++ E DP H V +A + W E +
Sbjct: 802 KALQECPNSGILWSEAVFLEARPQRKTKSVDALKKC-EHDP-H--VLLAVAKLFWSERKI 857
Query: 267 DTARELYERALSIDS 281
ARE + R + IDS
Sbjct: 858 TKAREWFHRTVKIDS 872
Score = 144 (55.7 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 65/277 (23%), Positives = 121/277 (43%)
Query: 59 LGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQ 118
+ +I KAR L + + H AW A LE G ++ AR L+ KG + C +E ++
Sbjct: 288 INDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWL 347
Query: 119 TLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQAS 178
A L+ + A+ + QA + P+S +I +++E A +++ +A++
Sbjct: 348 EAARLQPG----DTAKAVVAQAVRHLPQSVRIYIRAAELETDIR---AKKRVLRKALEHV 400
Query: 179 PKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVN--PRDPVLLQSLALLEYKYSTANLAR 236
P + W +A + + + + AV P L +LA LE T AR
Sbjct: 401 PNSVRLW------KAAVELEEPEDARIMLSRAVECCPTSVELWLALARLE----TYENAR 450
Query: 237 KLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERAL-SIDSTTESAARCLQAW-G 294
K+ +A E P + +WI +E GN ++ +RA+ S+ + R + W
Sbjct: 451 KVLNKARENIPTDRHIWITAAKLEEANGNTQMVEKIIDRAITSLRANGVEINR--EQWIQ 508
Query: 295 VLEQ--RVGNLSAARRLFRSSLNINSQSYITWMTWAQ 329
E+ R G+++ + + R+ + I + TW +
Sbjct: 509 DAEECDRAGSVATCQAVMRAVIGIGIEEEDRKHTWME 545
Score = 143 (55.4 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 60/231 (25%), Positives = 98/231 (42%)
Query: 167 ARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLE 226
AR ++ A+Q P + W FE N G + + LL+ A P+ VL A +
Sbjct: 559 ARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVLWLMGAKSK 618
Query: 227 YKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESA 286
+ AR + A + +P + +W+A +E + + AR L +A S T
Sbjct: 619 WLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPT---- 674
Query: 287 ARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEIRNL 346
AR LE +GN++AA+ L +L WM Q+EE QG + E R
Sbjct: 675 ARVFMKSVKLEWVLGNITAAQELCEEALRHYEDFPKLWMMKGQIEE-QGELM--ERAREA 731
Query: 347 YFQQRTEVVDDAS-WVMGFMDIIDPALDRIKQLLN-LEKSSYKEPSAYSPG 395
Y Q + W++ + ++ + ++ + LEKS K P +PG
Sbjct: 732 YNQGLKKCPHSTPLWLL--LSRLEEKIGQLTRARAILEKSRLKNPK--NPG 778
Score = 137 (53.3 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 55/238 (23%), Positives = 99/238 (41%)
Query: 99 ARQLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQME 158
AR + A L+ + ++ A E E L ++A PK+ W+ ++ +
Sbjct: 559 ARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVLWLMGAKSK 618
Query: 159 MQQENNLAARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVL 218
+ AAR + A QA+P + W E+ ++ ++LL + P V
Sbjct: 619 WLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVF 678
Query: 219 LQSLALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNL-DTARELYERAL 277
++S+ L E+ A++L A +W+ G +E ++G L + ARE Y + L
Sbjct: 679 MKSVKL-EWVLGNITAAQELCEEALRHYEDFPKLWMMKGQIE-EQGELMERAREAYNQGL 736
Query: 278 SIDSTTESAARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQG 335
S L LE+++G L+ AR + S N ++ W+ +LE G
Sbjct: 737 K--KCPHSTPLWLLL-SRLEEKIGQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAG 791
Score = 127 (49.8 bits), Expect = 0.00018, P = 0.00018
Identities = 70/328 (21%), Positives = 124/328 (37%)
Query: 5 DYWPEDGRPYVALGKVLSKQSKVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGK 64
+ W +D G V + Q A RA+ G + ++ ++ + + + +
Sbjct: 504 EQWIQDAEECDRAGSVATCQ---AVMRAVIGIGIEEEDRKHTWMEDADSCVAHNALECAR 560
Query: 65 ARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLE 124
A + K + W A E G + LL + + C E ++ A +
Sbjct: 561 AIYAYALQVFPSKKSV--WLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVLWLMGAKSK 618
Query: 125 AKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNR-F 183
A AR++ A + NP S W+A ++E + AR+L +A ++P R F
Sbjct: 619 WLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVF 678
Query: 184 AWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRAS 243
V E +G I ++L + P L +E + AR+ + +
Sbjct: 679 MKSVK--LEWVLGNITAAQELCEEALRHYEDFPKLWMMKGQIEEQGELMERAREAYNQGL 736
Query: 244 EIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQRVGNL 303
+ P P+W+ +E K G L AR + E++ ++ L++ LE R G
Sbjct: 737 KKCPHSTPLWLLLSRLEEKIGQLTRARAILEKSRL--KNPKNPGLWLESVR-LEYRAGLK 793
Query: 304 SAARRLFRSSLNINSQSYITWMTWAQLE 331
+ A L +L S I W LE
Sbjct: 794 NIANTLMAKALQECPNSGILWSEAVFLE 821
>UNIPROTKB|F1NNA8 [details] [associations]
symbol:Gga.1615 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR001440 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF00515 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 GO:GO:0005739 Gene3D:1.25.40.10 InterPro:IPR013105
Pfam:PF07719 GeneTree:ENSGT00550000074327 InterPro:IPR013618
Pfam:PF08409 OMA:RLYPRHA EMBL:AADN02006469 EMBL:AADN02006470
IPI:IPI00593086 Ensembl:ENSGALT00000021134 Uniprot:F1NNA8
Length = 945
Score = 154 (59.3 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 64/300 (21%), Positives = 117/300 (39%)
Query: 4 IDYWPEDGRPYVALGKVLSKQSKVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIG 63
I Y P+ Y +L +L++Q ++ EA +Y G + E+ + + V G
Sbjct: 638 IKYGPDFADAYSSLASLLAEQERLKEAEEVYKAGIENCP-ESSDLHNNYGVFLVDTGAPE 696
Query: 64 KARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALL 123
+A + + H A L G K+A + LK E I L L
Sbjct: 697 RAVSHYRQAIHLSPTHHVAMVNLGRLHRSLGQNKEAEAWYKRALKVSRKAE-ILSPLGAL 755
Query: 124 EAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRF 183
RYE+A ++R+A P + + +A +Q+ A ++ + +
Sbjct: 756 YYNTGRYEEALQVYREAASLQPSNKETRLALAQVLAMMGRTKEAEKMTNHVLDEDVECLE 815
Query: 184 AWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLE-YKYSTANLARKLF--- 239
+ + + K + + + P+DP ++ L + + NL + F
Sbjct: 816 CYRLLSAIYSKQEHYAKALEAIDKALQLKPKDPKIISELFFTKGNQLREQNLLDEAFENY 875
Query: 240 RRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQR 299
+RA E++ W+ G +E +GN TAR YE+AL + ++ L LE+R
Sbjct: 876 KRAVELNSDQAQAWMNMGGIEHIKGNYITARGYYEKALQLVPNSKLLKENLAKLDRLEKR 935
>FB|FBgn0036828 [details] [associations]
symbol:CG6841 species:7227 "Drosophila melanogaster"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0005684 "U2-type spliceosomal complex" evidence=ISS]
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=IC] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0071011 "precatalytic spliceosome"
evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR003107 InterPro:IPR010491 InterPro:IPR011990
InterPro:IPR013026 Pfam:PF06424 PROSITE:PS50293 SMART:SM00386
EMBL:AE014296 GO:GO:0022008 GO:GO:0005682 Gene3D:1.25.40.10
GO:GO:0071011 GO:GO:0000398 GO:GO:0071013 GO:GO:0000381 KO:K12855
OMA:IWLRAAY InterPro:IPR027108 PANTHER:PTHR11246:SF1
GeneTree:ENSGT00550000075016 FlyBase:FBgn0036828 EMBL:BT021415
RefSeq:NP_649073.1 UniGene:Dm.11665 SMR:Q9VVU6 MINT:MINT-316737
STRING:Q9VVU6 EnsemblMetazoa:FBtr0075068 GeneID:40064
KEGG:dme:Dmel_CG6841 UCSC:CG6841-RA InParanoid:Q9VVU6
GenomeRNAi:40064 NextBio:816818 Uniprot:Q9VVU6
Length = 931
Score = 152 (58.6 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 76/337 (22%), Positives = 123/337 (36%)
Query: 15 VALGKVLSKQSKVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARELFDAS-- 72
V L L++ AR + K + + IW A LE GNI ++ D S
Sbjct: 424 VELWLALARLETYENARKVLNKARENIPTDRQ-IWTTAAKLEEANGNIHMVEKIIDRSLT 482
Query: 73 TVADKGHIAAWHGW--AVLELRQGNIKKARQLLAKGLKFCGGNEYIY-QTL---ALLEAK 126
++ G W +E + Q + K + G E QT A AK
Sbjct: 483 SLTVNGVEINRDQWFQEAIEAEKSGAVNCCQSIVKAVIGIGVEEEDRKQTWIDDAEFCAK 542
Query: 127 ANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWH 186
N +E AR ++ A + P + W+ + E + L +RAV PK+ W
Sbjct: 543 ENAFECARAVYAHALQIFPSKKSIWLRAAYFEKNHGTRESLEALLQRAVAHCPKSEILWL 602
Query: 187 VWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEID 246
+ + G + + +L + NP + + LE + S AR+L +A
Sbjct: 603 MGAKSKWMAGDVPAARGILSLAFQANPNSEDIWLAAVKLESENSEYERARRLLAKARGSA 662
Query: 247 PRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQRVGNLSAA 306
P + V + +EW D A L E A+ + + G +E++ A
Sbjct: 663 PTPR-VMMKSARLEWALEKFDEALRLLEEAVEV---FPDFPKLWMMKGQIEEQQRRTDDA 718
Query: 307 RRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEI 343
+ L S W+ A LEE +G +A I
Sbjct: 719 AATYTLGLKKCPTSIPLWILSANLEERKGVLTKARSI 755
Score = 149 (57.5 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 64/286 (22%), Positives = 112/286 (39%)
Query: 49 WQCWAVLENKLGNIGKARELFDAST---VADKGHIAAWHGWAVLELRQGNIKKARQLLAK 105
W A+ K G + + + A V ++ W A ++ + AR + A
Sbjct: 496 WFQEAIEAEKSGAVNCCQSIVKAVIGIGVEEEDRKQTWIDDAEFCAKENAFECARAVYAH 555
Query: 106 GLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNL 165
L+ + I+ A E E L ++A PKS W+ ++ + +
Sbjct: 556 ALQIFPSKKSIWLRAAYFEKNHGTRESLEALLQRAVAHCPKSEILWLMGAKSKWMAGDVP 615
Query: 166 AARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALL 225
AAR + A QA+P + W E+ ++ ++LL P V+++S A L
Sbjct: 616 AARGILSLAFQANPNSEDIWLAAVKLESENSEYERARRLLAKARGSAPTPRVMMKS-ARL 674
Query: 226 EYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTES 285
E+ + A +L A E+ P +W+ G +E ++ D A Y L T
Sbjct: 675 EWALEKFDEALRLLEEAVEVFPDFPKLWMMKGQIEEQQRRTDDAAATYTLGLK-KCPTSI 733
Query: 286 AARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLE 331
L A LE+R G L+ AR + N + + W+ ++E
Sbjct: 734 PLWILSA--NLEERKGVLTKARSILERGRLRNPKVAVLWLEAIRVE 777
Score = 143 (55.4 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 48/215 (22%), Positives = 85/215 (39%)
Query: 48 IWQCWAVLENKLGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGL 107
+W A + G++ AR + + A+ W LE ++AR+LLAK
Sbjct: 600 LWLMGAKSKWMAGDVPAARGILSLAFQANPNSEDIWLAAVKLESENSEYERARRLLAKA- 658
Query: 108 KFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAA 167
+ + A LE ++++A L +A + P W+ Q+E QQ A
Sbjct: 659 RGSAPTPRVMMKSARLEWALEKFDEALRLLEEAVEVFPDFPKLWMMKGQIEEQQRRTDDA 718
Query: 168 RQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEY 227
+ ++ P + W + E G + K + +L+ G NP+ VL +E
Sbjct: 719 AATYTLGLKKCPTSIPLWILSANLEERKGVLTKARSILERGRLRNPKVAVLWLEAIRVEL 778
Query: 228 KYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWK 262
+ +A + RA + P +W +ME K
Sbjct: 779 RAGLKEIASTMMARALQECPNAGELWAEAIFMETK 813
Score = 140 (54.3 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 62/272 (22%), Positives = 113/272 (41%)
Query: 59 LGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQ 118
+ +I KAR L + + H AW A LE G ++ AR L+ +G + +E ++
Sbjct: 278 INDIKKARLLLKSVRETNPNHPPAWIASARLEEVTGKVQMARNLIMRGCEMNIQSEDLWL 337
Query: 119 TLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQAS 178
A L+ + A+ + QA + P S WI + +E + + A R++F +A++
Sbjct: 338 EAARLQPP----DTAKAVIAQAARHIPTSVRIWIKAADLESETK---AKRRVFRKALEHI 390
Query: 179 PKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKL 238
P + W E N D + LL L +LA LE T ARK+
Sbjct: 391 PNSVRLWKAAVELE-NP---DDARILLSRAVECCNTSVELWLALARLE----TYENARKV 442
Query: 239 FRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAW---GV 295
+A E P + +W +E GN+ ++ +R+L+ T W +
Sbjct: 443 LNKARENIPTDRQIWTTAAKLEEANGNIHMVEKIIDRSLT-SLTVNGVEINRDQWFQEAI 501
Query: 296 LEQRVGNLSAARRLFRSSLNINSQSYITWMTW 327
++ G ++ + + ++ + I + TW
Sbjct: 502 EAEKSGAVNCCQSIVKAVIGIGVEEEDRKQTW 533
Score = 133 (51.9 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 71/289 (24%), Positives = 118/289 (40%)
Query: 14 YVALGKVLSKQSKVAEARAIYAK--GSQATQGENPYIWQCWAVLENKLGNIGKARELFDA 71
++A K+ S+ S+ AR + AK GS T P + A LE L +A L +
Sbjct: 635 WLAAVKLESENSEYERARRLLAKARGSAPT----PRVMMKSARLEWALEKFDEALRLLEE 690
Query: 72 STVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKANRYE 131
+ W +E +Q A GLK C + ++ A LE +
Sbjct: 691 AVEVFPDFPKLWMMKGQIEEQQRRTDDAAATYTLGLKKCPTSIPLWILSANLEERKGVLT 750
Query: 132 QARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVWGIF 191
+AR++ + NPK W+ ++E++ A + RA+Q P A +W
Sbjct: 751 KARSILERGRLRNPKVAVLWLEAIRVELRAGLKEIASTMMARALQECPN---AGELWA-- 805
Query: 192 EANMGFID-KGKKLLKIGHAVNP--RDPVLLQSLALLEYKYSTANLARKLFRRASEIDPR 248
EA F++ K ++ K A+ DP +L +++ L + + R F R +IDP
Sbjct: 806 EAI--FMETKPQRKTKSVDALKKCEHDPHVLLAVSKLFWSEHKFSKCRDWFNRTVKIDPD 863
Query: 249 HQPVWIAWGWMEWKEGNLDTARELYERALSIDSTT-ESAARC---LQAW 293
W + E G +E+ +R +S + T ES R +Q W
Sbjct: 864 LGDAWAYFYKFELLHGTEAQQQEVLDRCISAEPTHGESWCRVSKNIQNW 912
>ASPGD|ASPL0000052140 [details] [associations]
symbol:AN0111 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0006396 "RNA
processing" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0044732 "mitotic spindle pole body" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] InterPro:IPR003107
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF13181 SMART:SM00386 GO:GO:0008380 EMBL:BN001308
GO:GO:0006397 GO:GO:0005681 GO:GO:0007049 Gene3D:1.25.40.10
EMBL:AACD01000004 eggNOG:NOG289100 KO:K12867 OMA:PRSYKLW
RefSeq:XP_657715.1 ProteinModelPortal:Q5BH69 STRING:Q5BH69
EnsemblFungi:CADANIAT00002638 GeneID:2875887 KEGG:ani:AN0111.2
HOGENOM:HOG000176133 OrthoDB:EOG4DBXP7 Uniprot:Q5BH69
Length = 851
Score = 121 (47.7 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 53/196 (27%), Positives = 92/196 (46%)
Query: 116 IYQTLALLEAKANRYEQARNLFRQATK-CNPKSCAS-WIAWSQMEMQQENNLA--ARQLF 171
+Y T A+ + K E+ R+LF QA C PK ++ + +E +E LA A +++
Sbjct: 585 LYLTKAV-DRKIG-IERLRDLFEQALDGCPPKFARPLYLMYGNLE--EERGLARHAMRIY 640
Query: 172 ERAVQA-SPKNRFAWHVWGIFEANMGF-IDKGKKLLKIGHAVNPRDPV--LLQSLALLEY 227
ERA +A S ++RF + I ++ F + + + + A P + A +E
Sbjct: 641 ERATRAVSDEDRFEMFEFYITKSASNFGLPSTRPIYERAIAALPDHEAKEMCLKFAEMER 700
Query: 228 KYSTANLARKLFRRASEI-DPR-HQPVWIAWGWMEWKEGNLDTARELY--ERALSIDSTT 283
+ + AR ++ AS+ DPR + P W W E + GN DT +E+ +R++ T
Sbjct: 701 RLGEIDRARAIYGHASQFCDPRTNAPFWQKWEAFEVQHGNEDTFKEMLRIKRSVQAQYNT 760
Query: 284 ESAARCLQAWGVLEQR 299
+ QA +QR
Sbjct: 761 DVNFIASQAIARSQQR 776
Score = 85 (35.0 bits), Expect = 0.00078, Sum P(3) = 0.00078
Identities = 44/184 (23%), Positives = 76/184 (41%)
Query: 168 RQLFERAVQASPKNRFA---WHVWGIFEANMGFIDKGKKLL-KIGHAVNPRDPVLLQSLA 223
R LFE+A+ P +FA + ++G E G ++ + AV+ D +
Sbjct: 601 RDLFEQALDGCPP-KFARPLYLMYGNLEEERGLARHAMRIYERATRAVSDEDRFEMFEFY 659
Query: 224 LLEYKYSTANL--ARKLFRRASEIDPRHQP--VWIAWGWMEWKEGNLDTARELYERALSI 279
+ + S L R ++ RA P H+ + + + ME + G +D AR +Y A
Sbjct: 660 ITK-SASNFGLPSTRPIYERAIAALPDHEAKEMCLKFAEMERRLGEIDRARAIYGHASQF 718
Query: 280 -DSTTESAARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSV 338
D T A Q W E + GN + + R ++ +Q Y T + + + +
Sbjct: 719 CDPRTN--APFWQKWEAFEVQHGNEDTFKEMLRIKRSVQAQ-YNTDVNFIASQAIARSQQ 775
Query: 339 RAEE 342
RA E
Sbjct: 776 RAPE 779
Score = 78 (32.5 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 25/78 (32%), Positives = 39/78 (50%)
Query: 32 AIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARELFD-ASTVADKG--HIA-AWHGWA 87
AI A + G+ +W +A + G++ AR +F+ A V K +A W WA
Sbjct: 406 AIAAINPKKAVGKFSELWVNYAKFYERGGDLDTARIIFEKAVKVPFKSVNELAETWCEWA 465
Query: 88 VLELRQGNIKKARQLLAK 105
+ELR N KA +++AK
Sbjct: 466 EMELRSENFDKAVEIMAK 483
Score = 74 (31.1 bits), Expect = 0.00078, Sum P(3) = 0.00078
Identities = 18/55 (32%), Positives = 30/55 (54%)
Query: 131 EQARNLFRQATKCNPKS----CASWIAWSQMEMQQENNLAARQLFERAVQASPKN 181
+ AR +F +A K KS +W W++ME++ EN A ++ +A QA K+
Sbjct: 437 DTARIIFEKAVKVPFKSVNELAETWCEWAEMELRSENFDKAVEIMAKATQAPKKS 491
Score = 51 (23.0 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 18/67 (26%), Positives = 28/67 (41%)
Query: 14 YVALGKVLSKQSKVAEARAIYAKGSQA---TQGENPYIWQCWAVLENKLGNIGKARELFD 70
+V K + + AR I+ K + + E W WA +E + N KA E+
Sbjct: 423 WVNYAKFYERGGDLDTARIIFEKAVKVPFKSVNELAETWCEWAEMELRSENFDKAVEIMA 482
Query: 71 ASTVADK 77
+T A K
Sbjct: 483 KATQAPK 489
Score = 51 (23.0 bits), Expect = 0.00078, Sum P(3) = 0.00078
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 83 WHGWAVLELRQGNIKKARQLLAKGL 107
W G A + +GN +KAR + +G+
Sbjct: 280 WAGLATYWITKGNFEKARDVFEEGI 304
>DICTYBASE|DDB_G0280363 [details] [associations]
symbol:DDB_G0280363 species:44689 "Dictyostelium
discoideum" [GO:0006396 "RNA processing" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR003107 InterPro:IPR011990
InterPro:IPR019734 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
SMART:SM00386 dictyBase:DDB_G0280363 GO:GO:0005622
EMBL:AAFI02000035 EMBL:AAFI02000036 GO:GO:0006396 Gene3D:1.25.40.10
RefSeq:XP_641155.1 RefSeq:XP_641400.1 ProteinModelPortal:Q54VF4
GeneID:8622534 GeneID:8622535 KEGG:ddi:DDB_G0280363
KEGG:ddi:DDB_G0280519 eggNOG:NOG282937 InParanoid:Q54VF5
ProtClustDB:CLSZ2497219 Uniprot:Q54VF4
Length = 1304
Score = 151 (58.2 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 78/346 (22%), Positives = 153/346 (44%)
Query: 12 RPYVALGKVLSKQSKVAEARAIYAKGSQATQGENPYIWQCW---AVLENKLGNIGKAREL 68
R Y+ L + ++Q+ + AR Y K + +TQ PYI Q W A +E G + K +++
Sbjct: 770 RVYLELADLANRQNNLKLARKFYRKVT-STQ---PYISQGWLEYAKMEEDYGRLEKCQKI 825
Query: 69 FDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTL------AL 122
+ + E + N++ AR LL++ L+ ++ IY+T L
Sbjct: 826 LQLGLKHCPFNESLLIKGIRHEEKMDNLEGARALLSQ-LR----DQSIYKTWRAVMEGGL 880
Query: 123 LEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNR 182
LEA+A + AR +F+ K P + ++E + E A + E+ + PK
Sbjct: 881 LEARAGNIDVARKIFKYLMKHVPWYGPIYQEAYKLEERCEEYERAINIVEKGLFEDPKYG 940
Query: 183 FAWH-VWGIFE-ANMGFIDKGKKLLKIGHAVNPRDPV--LLQSLALLEYKYSTANLARKL 238
W ++E + GF+ + ++ R+ + A +E + L+R
Sbjct: 941 PLWFSALRLYEKTSHGFLQSTRNTVERARQAVSREVTWKIYFEAAQIEERSKNLTLSRAA 1000
Query: 239 FRRASEIDPRHQ--PVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVL 296
+ ++ E+ P + VW+ E N+ AR+L RAL + ++ + L + L
Sbjct: 1001 YVKSVELCPENLLWKVWLGGSRTELNADNICIARKLVFRALE-EVPSKLRSLVLLEYSRL 1059
Query: 297 EQRVGNLSAARRLFRSSLNINSQSYITWMTWAQ--LEEDQGNSVRA 340
E+ GN++ +RR+ + + + ++ + W + + L E + N+ A
Sbjct: 1060 EEYAGNINKSRRILKMA---HVEARLDWKVFLESVLLEMRANNYEA 1102
Score = 128 (50.1 bits), Expect = 0.00021, P = 0.00021
Identities = 70/289 (24%), Positives = 115/289 (39%)
Query: 72 STVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQ---TLALLEAKAN 128
S + +K H + A L RQ N+K AR+ K YI Q A +E
Sbjct: 761 SVLPEKVHWRVYLELADLANRQNNLKLARKFYRK---VTSTQPYISQGWLEYAKMEEDYG 817
Query: 129 RYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAV-QASPKNRFAWHV 187
R E+ + + + K P + + I + E + +N AR L + Q+ K A
Sbjct: 818 RLEKCQKILQLGLKHCPFNESLLIKGIRHEEKMDNLEGARALLSQLRDQSIYKTWRAVME 877
Query: 188 WGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDP 247
G+ EA G ID +K+ K P + Q LE + A + + DP
Sbjct: 878 GGLLEARAGNIDVARKIFKYLMKHVPWYGPIYQEAYKLEERCEEYERAINIVEKGLFEDP 937
Query: 248 RHQPVWIAWGWMEWK--EGNLDTARELYERALSIDSTTESAARCLQAWGVLEQRVGNLSA 305
++ P+W + + K G L + R ERA S + +A +E+R NL+
Sbjct: 938 KYGPLWFSALRLYEKTSHGFLQSTRNTVERARQAVSREVTWKIYFEA-AQIEERSKNLTL 996
Query: 306 ARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEIRNLYFQQRTEV 354
+R + S+ + ++ + W W + N+ R L F+ EV
Sbjct: 997 SRAAYVKSVELCPENLL-WKVWLGGSRTELNADNICIARKLVFRALEEV 1044
Score = 127 (49.8 bits), Expect = 0.00026, P = 0.00026
Identities = 59/249 (23%), Positives = 107/249 (42%)
Query: 14 YVALGKVLSKQSKVAEARAIYAKGSQATQGENPYIWQCW---AVLENKLGNIGKAREL-F 69
Y ++ + + +RA Y K + EN +W+ W + E NI AR+L F
Sbjct: 981 YFEAAQIEERSKNLTLSRAAYVKSVELCP-EN-LLWKVWLGGSRTELNADNICIARKLVF 1038
Query: 70 DA-STVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKAN 128
A V K ++ LE GNI K+R++L + ++ LLE +AN
Sbjct: 1039 RALEEVPSKLRSLVLLEYSRLEEYAGNINKSRRILKMAHVEARLDWKVFLESVLLEMRAN 1098
Query: 129 RYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVW 188
YE A +++ K + + W A Q+ Q + + +F++A+Q PK+ W
Sbjct: 1099 NYEAAIKEAKESLKIHSGAGRLWAALIQLN-QLKGVKSQLNVFKKALQFVPKSGEVWCEG 1157
Query: 189 GIFEANMGFIDKGKKLLKIGHAVNPR--DPVL-LQSLALLEYKYSTANLARKLFRRASEI 245
N + + ++ L+ P+ D + L L ++E K +++ KL +
Sbjct: 1158 ARIALNNNELREARRFLEFAIQFTPQFGDSFIELLRLEIME-KGPNCDIS-KLEQLCINA 1215
Query: 246 DPRHQPVWI 254
DP + +W+
Sbjct: 1216 DPNYGFMWL 1224
>UNIPROTKB|F1N5E9 [details] [associations]
symbol:TMTC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR001440 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF00515 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 GO:GO:0005739 Gene3D:1.25.40.10
GeneTree:ENSGT00550000074327 InterPro:IPR013618 Pfam:PF08409
OMA:RLYPRHA EMBL:DAAA02013961 EMBL:DAAA02013962 EMBL:DAAA02013963
EMBL:DAAA02013964 EMBL:DAAA02013965 EMBL:DAAA02013966
IPI:IPI00706299 UniGene:Bt.45401 ProteinModelPortal:F1N5E9
Ensembl:ENSBTAT00000007064 NextBio:20875950 Uniprot:F1N5E9
Length = 939
Score = 149 (57.5 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 66/301 (21%), Positives = 112/301 (37%)
Query: 4 IDYWPEDGRPYVALGKVLSKQSKVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIG 63
I Y PE Y +L +L++Q + EA IY G + + + + V G
Sbjct: 632 IKYGPEFADAYSSLASLLAEQERFKEAEEIYLAGIKKCPDSSD-LHNNYGVFLVDTGFPE 690
Query: 64 KARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALL 123
KA + + H A L G+ A + + L+ E I L L
Sbjct: 691 KAVAHYQQAIKLSPSHHVAMVNLGRLYRSLGDNSVAEEWYKRALQVARKTE-ILSPLGAL 749
Query: 124 EAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRF 183
RYE+A +R+A P +A +Q+ A ++ V
Sbjct: 750 YYNTGRYEEALQTYREAVALQPSQRELRLALAQVLAVMGQTKEAEKMTSHIVSEETGCLE 809
Query: 184 AWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLE-YKYSTANLARKLF--- 239
+ + + DK + + P+DP ++ L + + NL K F
Sbjct: 810 CYRLLSAIHSKQEQHDKALDAIDKALKLKPKDPKVISELFFTKGNQLREQNLLDKAFESY 869
Query: 240 RRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQR 299
+ A E++P W+ G ++ +GN +AR YERAL + ++ L LE+R
Sbjct: 870 KAAVELNPDQAQAWMNMGGIQHIKGNYVSARTYYERALQLVPDSKLLQENLAKLDRLEKR 929
Query: 300 V 300
+
Sbjct: 930 L 930
>MGI|MGI:3039590 [details] [associations]
symbol:Tmtc1 "transmembrane and tetratricopeptide repeat
containing 1" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
MGI:MGI:3039590 GO:GO:0016021 GO:GO:0005739 eggNOG:COG0457
Gene3D:1.25.40.10 InterPro:IPR013105 Pfam:PF07719
GeneTree:ENSGT00550000074327 InterPro:IPR013618 Pfam:PF08409
CTD:83857 HOVERGEN:HBG106148 OrthoDB:EOG41C6VN EMBL:AK046396
EMBL:AK137545 EMBL:AC126683 EMBL:AC142274 IPI:IPI00653264
IPI:IPI01007647 RefSeq:NP_945318.2 UniGene:Mm.137858
ProteinModelPortal:Q3UV71 SMR:Q3UV71 STRING:Q3UV71
PhosphoSite:Q3UV71 PRIDE:Q3UV71 Ensembl:ENSMUST00000060095
Ensembl:ENSMUST00000100772 GeneID:387314 KEGG:mmu:387314
UCSC:uc009eti.2 UCSC:uc009etj.2 HOGENOM:HOG000067906
InParanoid:Q3UV71 OMA:RLYPRHA NextBio:405818 Bgee:Q3UV71
Genevestigator:Q3UV71 Uniprot:Q3UV71
Length = 942
Score = 148 (57.2 bits), Expect = 9.3e-07, P = 9.3e-07
Identities = 64/301 (21%), Positives = 114/301 (37%)
Query: 4 IDYWPEDGRPYVALGKVLSKQSKVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIG 63
I Y P+ Y +L +L++Q + EA IY G + + + +AV G
Sbjct: 635 IKYGPDFADAYSSLASLLAEQERFKEAEDIYQAGIKNCPDSSD-LHNNYAVFLVDSGFPE 693
Query: 64 KARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALL 123
KA + + H A L G KA + + LK E + L L
Sbjct: 694 KAVAHYQQAIQLSPSHHVAVVNLGRLYRSLGENSKAEEWYRRALKVARTAE-VLSPLGAL 752
Query: 124 EAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRF 183
R+++A ++R+A P +A +Q+ A ++ V P+
Sbjct: 753 YYNTGRHKEALEVYREAVSLQPSQRELRLALAQVLAVMGQTKEAEKITSHIVSEEPRCLE 812
Query: 184 AWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLE-YKYSTANLARKLFRR- 241
+ + + K + ++ + P+DP ++ L + + NL K F
Sbjct: 813 CYRLLSAIHSKQEHHGKALEAIEKALQLKPKDPKVISELFFTKGNQLREQNLLDKAFESY 872
Query: 242 --ASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQR 299
A +DP W+ G + +G+ +AR YERAL + ++ L LE+R
Sbjct: 873 EAAVTLDPDQAQAWMNMGGIRHIQGSYVSARAYYERALKLVPDSKLLKENLAKLDRLERR 932
Query: 300 V 300
+
Sbjct: 933 L 933
>UNIPROTKB|F1SCH5 [details] [associations]
symbol:XAB2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006283 "transcription-coupled nucleotide-excision repair"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0006396 "RNA processing" evidence=IEA] InterPro:IPR003107
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
PROSITE:PS50005 PROSITE:PS50293 SMART:SM00386 GO:GO:0006351
GO:GO:0006396 Gene3D:1.25.40.10 InterPro:IPR013105 Pfam:PF07719
GO:GO:0071013 GO:GO:0001824 GO:GO:0006283 KO:K12867 OMA:PRSYKLW
CTD:56949 GeneTree:ENSGT00550000075140 EMBL:CU929919
RefSeq:XP_003123199.1 UniGene:Ssc.48349 Ensembl:ENSSSCT00000014834
GeneID:100525328 KEGG:ssc:100525328 Uniprot:F1SCH5
Length = 855
Score = 142 (55.0 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 77/291 (26%), Positives = 129/291 (44%)
Query: 19 KVLSKQSKVAEARAIYAKGSQATQG---ENPYIWQCWAVLENKLGNIGKARELFDASTVA 75
++L K + + RA Y GS+ Q ++ +W A LE LG + ++D +
Sbjct: 454 RLLRKATALPARRAEYFDGSEPVQNRVYKSLKVWSMLADLEESLGTFQSTKAVYDR--IL 511
Query: 76 DKGHIAAWH---GWAVLELRQGNIKKARQLLAKGLK-FCGGN-EYIYQT-LALLEAK--A 127
D IA +A+ +++ + +G+ F N I+ T L A+
Sbjct: 512 DL-RIATPQIVINYAMFLEEHKYFEESFKAYERGISLFKWPNVSDIWSTYLTKFIARYGG 570
Query: 128 NRYEQARNLFRQATK-CNPKSCAS-WIAWSQMEMQQENNLA--ARQLFERAVQA-SPKNR 182
+ E+AR+LF QA C PK + ++ ++Q+E +E LA A ++ERA +A P +
Sbjct: 571 RKLERARDLFEQALDGCPPKYAKTLYLLYAQLE--EEWGLARHAMAVYERATRAVEPSQQ 628
Query: 183 F---------AWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTAN 233
+ A ++G+ G K ++L HA R+ L A +E K +
Sbjct: 629 YDMFNIYIKRAAEIYGVTHTR-GIYQKAIEVLSDEHA---REMCL--RFADMECKLGEID 682
Query: 234 LARKLFRRASEI-DPRHQPV-WIAWGWMEWKEGNLDTARELYERALSIDST 282
AR ++ S+I DPR W W E + GN DT RE+ S+ +T
Sbjct: 683 RARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTIREMLRIRRSVQAT 733
>MGI|MGI:1914689 [details] [associations]
symbol:Xab2 "XPA binding protein 2" species:10090 "Mus
musculus" [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=ISO] [GO:0006396 "RNA
processing" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR003107
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
SMART:SM00386 MGI:MGI:1914689 GO:GO:0008380 GO:GO:0006397
GO:GO:0006351 Gene3D:1.25.40.10 InterPro:IPR013105 Pfam:PF07719
GO:GO:0071013 GO:GO:0001824 GO:GO:0006283 eggNOG:NOG289100
KO:K12867 OMA:PRSYKLW HOGENOM:HOG000176133 CTD:56949
HOVERGEN:HBG024066 OrthoDB:EOG4G4GPQ EMBL:AK002890 EMBL:AK008628
EMBL:BC021341 IPI:IPI00120744 RefSeq:NP_080432.1 UniGene:Mm.23739
ProteinModelPortal:Q9DCD2 SMR:Q9DCD2 STRING:Q9DCD2
PhosphoSite:Q9DCD2 PaxDb:Q9DCD2 PRIDE:Q9DCD2
Ensembl:ENSMUST00000019614 GeneID:67439 KEGG:mmu:67439
UCSC:uc009kry.1 GeneTree:ENSGT00550000075140 InParanoid:Q9DCD2
NextBio:324566 Bgee:Q9DCD2 CleanEx:MM_XAB2 Genevestigator:Q9DCD2
GermOnline:ENSMUSG00000019470 Uniprot:Q9DCD2
Length = 855
Score = 140 (54.3 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 74/291 (25%), Positives = 128/291 (43%)
Query: 19 KVLSKQSKVAEARAIYAKGSQATQG---ENPYIWQCWAVLENKLGNIGKARELFDASTVA 75
K+L K + + RA Y GS+ Q ++ +W A LE LG + ++D +
Sbjct: 454 KLLRKATALPARRAEYFDGSEPVQNRVYKSLKVWSMLADLEESLGTFQSTKAVYDR--IL 511
Query: 76 DKGHIAAWH---GWAVLELRQGNIKKARQLLAKGL---KFCGGNEY--IYQTLALLEAKA 127
D IA +A+ +++ + +G+ K+ ++ Y T +
Sbjct: 512 DL-RIATPQIVINYAMFLEEHKYFEESFKAYERGISLFKWPNVSDIWSTYLTKFISRYGG 570
Query: 128 NRYEQARNLFRQATK-CNPKSCAS-WIAWSQMEMQQENNLA--ARQLFERAVQA-SPKNR 182
+ E+AR+LF QA C PK + ++ ++Q+E +E LA A +++RA +A P +
Sbjct: 571 RKLERARDLFEQALDGCPPKYAKTLYLLYAQLE--EEWGLARHAMAVYDRATRAVEPAQQ 628
Query: 183 F---------AWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTAN 233
+ A ++G+ G K ++L HA R+ L A +E K +
Sbjct: 629 YDMFNIYIKRAAEIYGVTHTR-GIYQKAIEVLSDEHA---REMCL--RFADMECKLGEID 682
Query: 234 LARKLFRRASEI-DPRHQPV-WIAWGWMEWKEGNLDTARELYERALSIDST 282
AR ++ S+I DPR W W E + GN DT RE+ S+ +T
Sbjct: 683 RARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTIREMLRIRRSVQAT 733
>RGD|621217 [details] [associations]
symbol:Xab2 "XPA binding protein 2" species:10116 "Rattus
norvegicus" [GO:0001824 "blastocyst development" evidence=IEA;ISO]
[GO:0006283 "transcription-coupled nucleotide-excision repair"
evidence=ISO;ISS] [GO:0006351 "transcription, DNA-dependent"
evidence=ISO;ISS] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IEA;ISO] InterPro:IPR003107
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
SMART:SM00386 RGD:621217 GO:GO:0008380 GO:GO:0006397 GO:GO:0006351
Gene3D:1.25.40.10 InterPro:IPR013105 Pfam:PF07719 GO:GO:0071013
GO:GO:0001824 GO:GO:0006283 eggNOG:NOG289100 KO:K12867 OMA:PRSYKLW
HOGENOM:HOG000176133 CTD:56949 HOVERGEN:HBG024066 OrthoDB:EOG4G4GPQ
GeneTree:ENSGT00550000075140 EMBL:AF277899 EMBL:BC081723
IPI:IPI00201089 RefSeq:NP_620809.1 UniGene:Rn.24921
ProteinModelPortal:Q99PK0 STRING:Q99PK0 Ensembl:ENSRNOT00000001309
GeneID:245976 KEGG:rno:245976 UCSC:RGD:621217 InParanoid:Q99PK0
NextBio:623254 Genevestigator:Q99PK0 GermOnline:ENSRNOG00000000988
Uniprot:Q99PK0
Length = 855
Score = 140 (54.3 bits), Expect = 6.1e-06, P = 6.1e-06
Identities = 74/291 (25%), Positives = 128/291 (43%)
Query: 19 KVLSKQSKVAEARAIYAKGSQATQG---ENPYIWQCWAVLENKLGNIGKARELFDASTVA 75
K+L K + + RA Y GS+ Q ++ +W A LE LG + ++D +
Sbjct: 454 KLLRKATALPARRAEYFDGSEPVQNRVYKSLKVWSMLADLEESLGTFQSTKAVYDR--IL 511
Query: 76 DKGHIAAWH---GWAVLELRQGNIKKARQLLAKGL---KFCGGNEY--IYQTLALLEAKA 127
D IA +A+ +++ + +G+ K+ ++ Y T +
Sbjct: 512 DL-RIATPQIVINYAMFLEEHKYFEESFKAYERGISLFKWPNVSDIWSTYLTKFISRYGG 570
Query: 128 NRYEQARNLFRQATK-CNPKSCAS-WIAWSQMEMQQENNLA--ARQLFERAVQA-SPKNR 182
+ E+AR+LF QA C PK + ++ ++Q+E +E LA A +++RA +A P +
Sbjct: 571 RKLERARDLFEQALDGCPPKYAKTLYLLYAQLE--EEWGLARHAMAVYDRATRAVEPAQQ 628
Query: 183 F---------AWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTAN 233
+ A ++G+ G K ++L HA R+ L A +E K +
Sbjct: 629 YDMFNIYIKRAAEIYGVTHTR-GIYQKAIEVLSDEHA---REMCL--RFADMECKLGEID 682
Query: 234 LARKLFRRASEI-DPRHQPV-WIAWGWMEWKEGNLDTARELYERALSIDST 282
AR ++ S+I DPR W W E + GN DT RE+ S+ +T
Sbjct: 683 RARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTIREMLRIRRSVQAT 733
>UNIPROTKB|J9PAI6 [details] [associations]
symbol:XAB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006396 "RNA processing" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR003107
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
PROSITE:PS50005 PROSITE:PS50293 SMART:SM00386 GO:GO:0005622
GO:GO:0006396 Gene3D:1.25.40.10 InterPro:IPR013105 Pfam:PF07719
GeneTree:ENSGT00550000075140 EMBL:AAEX03012459
Ensembl:ENSCAFT00000044264 Uniprot:J9PAI6
Length = 799
Score = 138 (53.6 bits), Expect = 9.3e-06, P = 9.3e-06
Identities = 76/291 (26%), Positives = 129/291 (44%)
Query: 19 KVLSKQSKVAEARAIYAKGSQATQG---ENPYIWQCWAVLENKLGNIGKARELFDASTVA 75
++L K + + RA Y GS+ Q ++ +W A LE LG + ++D +
Sbjct: 454 RLLRKATALPARRAEYFDGSEPVQNRVYKSLKVWSMLADLEESLGTFQSTKAVYDR--IL 511
Query: 76 DKGHIAAWH---GWAVLELRQGNIKKARQLLAKGLK-FCGGN-EYIYQT-LALLEAK--A 127
D IA +A+ +++ + +G+ F N I+ T L A+
Sbjct: 512 DL-RIATPQIVINYAMFLEEHKYFEESFKAYERGISLFKWPNVSDIWSTYLTKFIARYGG 570
Query: 128 NRYEQARNLFRQATK-CNPKSCAS-WIAWSQMEMQQENNLA--ARQLFERAVQA-SPKNR 182
+ E+AR+LF QA C PK + ++ ++Q+E +E LA A ++ERA +A P +
Sbjct: 571 RKLERARDLFEQALDGCPPKYAKTLYLLYAQLE--EEWGLARHAMAVYERATRAVEPAQQ 628
Query: 183 F---------AWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTAN 233
+ A ++G+ G K ++L HA R+ L A +E + +
Sbjct: 629 YDMFNIYIKRAAEIYGVTHTR-GIYQKAIEVLSDEHA---REMCL--RFADMECRLGEID 682
Query: 234 LARKLFRRASEI-DPRHQPV-WIAWGWMEWKEGNLDTARELYERALSIDST 282
AR ++ S+I DPR W W E + GN DT RE+ S+ +T
Sbjct: 683 RARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTIREMLRIRRSVQAT 733
>UNIPROTKB|Q888C3 [details] [associations]
symbol:PSPTO_1107 "TPR domain protein" species:223283
"Pseudomonas syringae pv. tomato str. DC3000" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
eggNOG:COG0457 Gene3D:1.25.40.10 EMBL:AE016853
GenomeReviews:AE016853_GR InterPro:IPR013105 Pfam:PF07719
OMA:AGRYDDS RefSeq:NP_790941.1 ProteinModelPortal:Q888C3
GeneID:1182743 KEGG:pst:PSPTO_1107 PATRIC:19993431
HOGENOM:HOG000264797 ProtClustDB:CLSK868821
BioCyc:PSYR223283:GJIX-1130-MONOMER Uniprot:Q888C3
Length = 575
Score = 136 (52.9 bits), Expect = 9.7e-06, P = 9.7e-06
Identities = 59/237 (24%), Positives = 108/237 (45%)
Query: 59 LGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKAR---QLLAKGLKFCGGNEY 115
LG I + RE S + + + + +LRQ +I + AK L E
Sbjct: 328 LGRIHEERE-DPQSALNEYAQVGPGPDFLAAQLRQADILVSNGNGAEAAKRLSEARAEEP 386
Query: 116 IYQT-LALLEAKA----NRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQL 170
Y L L+EA+ ++ ++ + QA K P A+ + M ++ N+LA +
Sbjct: 387 DYAIQLYLIEAETLTSNDQLDRGWQVLNQALKQYPDD-ANLLYTRAMLAEKRNDLAQMEK 445
Query: 171 FERAV-QASPKNRFAWHVWG--IFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEY 227
R + + P+N A + G + + + + ++L++ H ++P DP +L SL + Y
Sbjct: 446 DLRTIIKREPENAMALNALGYTLSDRTTRYTE-ARELIEKAHQISPDDPAVLDSLGWVNY 504
Query: 228 KYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSI--DST 282
+ + A + R+A E P H+ V G + W +G+ AR+++ +AL DST
Sbjct: 505 RLGNLDAAERYLRQALERFPDHE-VAAHLGEVLWAKGDQREARQVWAKALEQQPDST 560
>UNIPROTKB|F5H315 [details] [associations]
symbol:XAB2 "Pre-mRNA-splicing factor SYF1" species:9606
"Homo sapiens" [GO:0005622 "intracellular" evidence=IEA]
[GO:0006396 "RNA processing" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] InterPro:IPR003107 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 PROSITE:PS50005
PROSITE:PS50293 SMART:SM00386 GO:GO:0005622 GO:GO:0006396
Gene3D:1.25.40.10 InterPro:IPR013105 Pfam:PF07719 GO:GO:0001824
EMBL:AC008763 HGNC:HGNC:14089 ChiTaRS:XAB2 IPI:IPI01015328
ProteinModelPortal:F5H315 SMR:F5H315 Ensembl:ENST00000534844
ArrayExpress:F5H315 Bgee:F5H315 Uniprot:F5H315
Length = 852
Score = 138 (53.6 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 76/291 (26%), Positives = 129/291 (44%)
Query: 19 KVLSKQSKVAEARAIYAKGSQATQG---ENPYIWQCWAVLENKLGNIGKARELFDASTVA 75
++L K + + RA Y GS+ Q ++ +W A LE LG + ++D +
Sbjct: 451 RLLRKATALPARRAEYFDGSEPVQNRVYKSLKVWSMLADLEESLGTFQSTKAVYDR--IL 508
Query: 76 DKGHIAAWH---GWAVLELRQGNIKKARQLLAKGLK-FCGGN-EYIYQT-LALLEAK--A 127
D IA +A+ +++ + +G+ F N I+ T L A+
Sbjct: 509 DL-RIATPQIVINYAMFLEEHKYFEESFKAYERGISLFKWPNVSDIWSTYLTKFIARYGG 567
Query: 128 NRYEQARNLFRQATK-CNPKSCAS-WIAWSQMEMQQENNLA--ARQLFERAVQA-SPKNR 182
+ E+AR+LF QA C PK + ++ ++Q+E +E LA A ++ERA +A P +
Sbjct: 568 RKLERARDLFEQALDGCPPKYAKTLYLLYAQLE--EEWGLARHAMAVYERATRAVEPAQQ 625
Query: 183 F---------AWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTAN 233
+ A ++G+ G K ++L HA R+ L A +E K +
Sbjct: 626 YDMFNIYIKRAAEIYGVTHTR-GIYQKAIEVLSDEHA---REMCL--RFADMECKLGEID 679
Query: 234 LARKLFRRASEI-DPRHQPV-WIAWGWMEWKEGNLDTARELYERALSIDST 282
AR ++ S+I DPR W W E + GN DT +E+ S+ +T
Sbjct: 680 RARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTIKEMLRIRRSVQAT 730
>UNIPROTKB|E2RPV4 [details] [associations]
symbol:XAB2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0006396 "RNA processing"
evidence=IEA] InterPro:IPR003107 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 PROSITE:PS50005
PROSITE:PS50293 SMART:SM00386 GO:GO:0006351 GO:GO:0006396
Gene3D:1.25.40.10 InterPro:IPR013105 Pfam:PF07719 GO:GO:0071013
GO:GO:0001824 GO:GO:0006283 KO:K12867 CTD:56949
GeneTree:ENSGT00550000075140 EMBL:AAEX03012459 RefSeq:XP_542113.3
ProteinModelPortal:E2RPV4 Ensembl:ENSCAFT00000029071 GeneID:484995
KEGG:cfa:484995 OMA:RRYLMYD NextBio:20859059 Uniprot:E2RPV4
Length = 855
Score = 138 (53.6 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 76/291 (26%), Positives = 129/291 (44%)
Query: 19 KVLSKQSKVAEARAIYAKGSQATQG---ENPYIWQCWAVLENKLGNIGKARELFDASTVA 75
++L K + + RA Y GS+ Q ++ +W A LE LG + ++D +
Sbjct: 454 RLLRKATALPARRAEYFDGSEPVQNRVYKSLKVWSMLADLEESLGTFQSTKAVYDR--IL 511
Query: 76 DKGHIAAWH---GWAVLELRQGNIKKARQLLAKGLK-FCGGN-EYIYQT-LALLEAK--A 127
D IA +A+ +++ + +G+ F N I+ T L A+
Sbjct: 512 DL-RIATPQIVINYAMFLEEHKYFEESFKAYERGISLFKWPNVSDIWSTYLTKFIARYGG 570
Query: 128 NRYEQARNLFRQATK-CNPKSCAS-WIAWSQMEMQQENNLA--ARQLFERAVQA-SPKNR 182
+ E+AR+LF QA C PK + ++ ++Q+E +E LA A ++ERA +A P +
Sbjct: 571 RKLERARDLFEQALDGCPPKYAKTLYLLYAQLE--EEWGLARHAMAVYERATRAVEPAQQ 628
Query: 183 F---------AWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTAN 233
+ A ++G+ G K ++L HA R+ L A +E + +
Sbjct: 629 YDMFNIYIKRAAEIYGVTHTR-GIYQKAIEVLSDEHA---REMCL--RFADMECRLGEID 682
Query: 234 LARKLFRRASEI-DPRHQPV-WIAWGWMEWKEGNLDTARELYERALSIDST 282
AR ++ S+I DPR W W E + GN DT RE+ S+ +T
Sbjct: 683 RARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTIREMLRIRRSVQAT 733
>UNIPROTKB|Q9HCS7 [details] [associations]
symbol:XAB2 "Pre-mRNA-splicing factor SYF1" species:9606
"Homo sapiens" [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IDA]
[GO:0006283 "transcription-coupled nucleotide-excision repair"
evidence=IDA;TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IC] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006281 "DNA repair" evidence=TAS] [GO:0006289
"nucleotide-excision repair" evidence=TAS] Reactome:REACT_216
InterPro:IPR003107 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 SMART:SM00386 GO:GO:0005654 GO:GO:0006351
Gene3D:1.25.40.10 InterPro:IPR013105 Pfam:PF07719 GO:GO:0000398
GO:GO:0071013 GO:GO:0001824 GO:GO:0006283 eggNOG:NOG289100
KO:K12867 OMA:PRSYKLW HOGENOM:HOG000176133 EMBL:AB026111
EMBL:AF226051 EMBL:AF258567 EMBL:AF547265 EMBL:BC007208
EMBL:BC008778 EMBL:AK074035 EMBL:AB033003 IPI:IPI00163084
RefSeq:NP_064581.2 UniGene:Hs.9822 ProteinModelPortal:Q9HCS7
SMR:Q9HCS7 IntAct:Q9HCS7 MINT:MINT-1475513 STRING:Q9HCS7
PhosphoSite:Q9HCS7 DMDM:25091548 PaxDb:Q9HCS7 PeptideAtlas:Q9HCS7
PRIDE:Q9HCS7 DNASU:56949 Ensembl:ENST00000358368 GeneID:56949
KEGG:hsa:56949 UCSC:uc002mgx.3 CTD:56949 GeneCards:GC19M007684
HGNC:HGNC:14089 MIM:610850 neXtProt:NX_Q9HCS7 PharmGKB:PA134905925
HOVERGEN:HBG024066 InParanoid:Q9HCS7 OrthoDB:EOG4G4GPQ ChiTaRS:XAB2
GenomeRNAi:56949 NextBio:62545 ArrayExpress:Q9HCS7 Bgee:Q9HCS7
CleanEx:HS_XAB2 Genevestigator:Q9HCS7 GermOnline:ENSG00000076924
Uniprot:Q9HCS7
Length = 855
Score = 138 (53.6 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 76/291 (26%), Positives = 129/291 (44%)
Query: 19 KVLSKQSKVAEARAIYAKGSQATQG---ENPYIWQCWAVLENKLGNIGKARELFDASTVA 75
++L K + + RA Y GS+ Q ++ +W A LE LG + ++D +
Sbjct: 454 RLLRKATALPARRAEYFDGSEPVQNRVYKSLKVWSMLADLEESLGTFQSTKAVYDR--IL 511
Query: 76 DKGHIAAWH---GWAVLELRQGNIKKARQLLAKGLK-FCGGN-EYIYQT-LALLEAK--A 127
D IA +A+ +++ + +G+ F N I+ T L A+
Sbjct: 512 DL-RIATPQIVINYAMFLEEHKYFEESFKAYERGISLFKWPNVSDIWSTYLTKFIARYGG 570
Query: 128 NRYEQARNLFRQATK-CNPKSCAS-WIAWSQMEMQQENNLA--ARQLFERAVQA-SPKNR 182
+ E+AR+LF QA C PK + ++ ++Q+E +E LA A ++ERA +A P +
Sbjct: 571 RKLERARDLFEQALDGCPPKYAKTLYLLYAQLE--EEWGLARHAMAVYERATRAVEPAQQ 628
Query: 183 F---------AWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTAN 233
+ A ++G+ G K ++L HA R+ L A +E K +
Sbjct: 629 YDMFNIYIKRAAEIYGVTHTR-GIYQKAIEVLSDEHA---REMCL--RFADMECKLGEID 682
Query: 234 LARKLFRRASEI-DPRHQPV-WIAWGWMEWKEGNLDTARELYERALSIDST 282
AR ++ S+I DPR W W E + GN DT +E+ S+ +T
Sbjct: 683 RARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTIKEMLRIRRSVQAT 733
>WB|WBGene00013343 [details] [associations]
symbol:prp-6 species:6239 "Caenorhabditis elegans"
[GO:0005622 "intracellular" evidence=IEA] [GO:0006396 "RNA
processing" evidence=IEA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040015 "negative regulation of
multicellular organism growth" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040039 "inductive cell migration" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0018996 "molting cycle, collagen and cuticulin-based cuticle"
evidence=IMP] InterPro:IPR003107 InterPro:IPR010491
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF06424 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
SMART:SM00386 GO:GO:0005634 GO:GO:0009792 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0018996
GO:GO:0000003 eggNOG:COG0457 Gene3D:1.25.40.10 GO:GO:0040039
GO:GO:0040015 InterPro:IPR013105 Pfam:PF07719 GO:GO:0000398
EMBL:AL132898 HOGENOM:HOG000116247 KO:K12855 OMA:IWLRAAY
InterPro:IPR027108 PANTHER:PTHR11246:SF1
GeneTree:ENSGT00550000075016 RefSeq:NP_507525.1
ProteinModelPortal:Q9GRZ2 SMR:Q9GRZ2 STRING:Q9GRZ2 PaxDb:Q9GRZ2
EnsemblMetazoa:Y59A8B.6.1 EnsemblMetazoa:Y59A8B.6.2 GeneID:180180
KEGG:cel:CELE_Y59A8B.6 UCSC:Y59A8B.6.1 CTD:180180 WormBase:Y59A8B.6
InParanoid:Q9GRZ2 NextBio:908332 Uniprot:Q9GRZ2
Length = 968
Score = 137 (53.3 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 83/356 (23%), Positives = 134/356 (37%)
Query: 1 MKCIDYWPEDGRPYVALGKVLSKQSKVAEARAIYAKGSQATQGENPYIWQCWAVLENKLG 60
+K + PE ++ L K+ +V EAR + ++ IW +E +
Sbjct: 624 LKACETVPEVEDYWLMLAKLRFVNKRVGEARDTLMSAFEKHGHQSEKIWLAATKIEIETD 683
Query: 61 NIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTL 120
AR LF + A W A E GN+++A++L + ++ IY L
Sbjct: 684 QFDTARGLFGKAR-AKAPSARVWMKNAHFEWCLGNVEEAKRLCEECIQKYDDFHKIYLVL 742
Query: 121 ALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPK 180
+ + N AR + Q + P WI ++E + + AR E+A +PK
Sbjct: 743 GQVLEQMNDVHGARLAYTQGIRKCPGVIPLWILLVRLEEKAGQIVKARVDLEKARLRNPK 802
Query: 181 NRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFR 240
N W FE +G + K+ + L +E + R
Sbjct: 803 NDDLWLESVRFEQRVGCPEMAKERMSRALQECEGSGKLWAEAIWMEGPHG---------R 853
Query: 241 RASEIDP----RHQP-VWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGV 295
RA ID H P V IA + W E + ARE + RA+++D A A+
Sbjct: 854 RAKSIDALKKCEHNPHVLIAAARLFWSERKIKKAREWFVRAVNLDPDNGDAFANFLAF-- 911
Query: 296 LEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRA-EEIRNLYFQQ 350
EQ G + +F+ + + Y W + +D N R EEI L Q+
Sbjct: 912 -EQIHGKEEDRKSVFKKCVT-SEPRYGD--LWQSVSKDPINWRRTTEEILQLATQK 963
Score = 121 (47.7 bits), Expect = 0.00083, P = 0.00083
Identities = 50/220 (22%), Positives = 93/220 (42%)
Query: 59 LGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQ 118
L +I KAR L + + H AW AVLE + G ++ AR + +G + +E ++
Sbjct: 314 LQDIKKARMLLKSVRETNPRHPPAWVASAVLEEQAGKLQTARNFIMEGCEKIKNSEELW- 372
Query: 119 TLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQAS 178
L + + E R++ A + P S W S +E ++ +++ +A++
Sbjct: 373 ---LHAIRLHPPELGRSIVANAVRSCPHSVRLWCKASDLEQDLKDK---KKVLRKALEQI 426
Query: 179 PKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKL 238
P + W +A + D + + AV LAL + T ARK+
Sbjct: 427 PSSVKLW------KAAVELEDPEDARILLTRAVECCSSSTEMWLALA--RLETYENARKV 478
Query: 239 FRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALS 278
+A E P + +W++ +E G D ++ +A+S
Sbjct: 479 LNKAREHIPTDRHIWLSAARLEETRGQKDMVDKIVAKAMS 518
>CGD|CAL0001343 [details] [associations]
symbol:orf19.6356 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0046540 "U4/U6 x U5 tri-snRNP
complex" evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] InterPro:IPR003107 InterPro:IPR010491
InterPro:IPR011990 Pfam:PF06424 SMART:SM00386 CGD:CAL0001343
GO:GO:0005634 eggNOG:COG0457 Gene3D:1.25.40.10 GO:GO:0000398
EMBL:AACQ01000192 EMBL:AACQ01000189 KO:K12855 InterPro:IPR027108
PANTHER:PTHR11246:SF1 RefSeq:XP_711574.1 RefSeq:XP_711643.1
ProteinModelPortal:Q59PD7 STRING:Q59PD7 GeneID:3646751
GeneID:3646834 KEGG:cal:CaO19.13713 KEGG:cal:CaO19.6356
Uniprot:Q59PD7
Length = 911
Score = 136 (52.9 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 72/294 (24%), Positives = 129/294 (43%)
Query: 2 KCIDYWPEDGRPYVALGKVLSKQSK-VAEARAIYAKGSQATQGENPYIWQC-WAVLENKL 59
K I P+ Y+ K + SK + +AR+I G A NP +A+++ +L
Sbjct: 561 KAISLNPQVPLFYLMYAKDKWQLSKDIPQARSILNSGELA----NPTDLSIKFAIIKLEL 616
Query: 60 --GNIGKA----RELFDASTVADKGHIAAWHGWA-VLELRQGNIKKARQLLAKGLKFCGG 112
GN+ A + + D + + W+ + +L +I + ++ K LK
Sbjct: 617 ITGNLLNAEKYIKHIIDTKPMESEKF---WYKYIHILRCLNSDITVLKDVIQKALKLFPN 673
Query: 113 NEYIY-QTLALLEAKANRYEQAR-NLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQL 170
+Y Q + +LE + EQAR N KC P+ WI SQ++ + + + AR +
Sbjct: 674 CWKLYLQNIQILE-DIDELEQARENALVGVKKC-PQCIYLWIKLSQIDEKAQIIIRARSI 731
Query: 171 FERAVQASPKNRFAWHVWGI-FEANMGFIDKGKKLLKIGHAVNPRDPVL-LQSLALLEYK 228
++A+ +P N W V+ I FE +G + + L P DP L + +L+L+ K
Sbjct: 732 LDQAILQNPNNPEIW-VYKIQFEKRIGNLSSLQNLTNKALKQFPTDPWLWIINLSLIP-K 789
Query: 229 YSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDST 282
S + +F A + + + G W +G ++ +ER+L D+T
Sbjct: 790 MSQR---KTIFLDALKATNNSNLILLISGVFFWFDGKYSKSKNWFERSLQSDNT 840
Score = 120 (47.3 bits), Expect = 0.0010, P = 0.0010
Identities = 52/216 (24%), Positives = 90/216 (41%)
Query: 56 ENKLGNIGKARELFDASTVADKGHIAAWHGWAVLELRQG-NIKKARQLLAKGLKFCGGNE 114
++K N+ K R + + ++ ++W A LE + G N+K A+Q + +G K C N+
Sbjct: 239 DSKYANLQKNRVILSSLRKSEPYKPSSWISSARLEEQDGKNLKLAKQYILEGCKKCPRND 298
Query: 115 YIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERA 174
I+ L + + + + L A NPKS W+ + +E NN+ R++ +
Sbjct: 299 EIW--LENIRLNQSDIKLCKQLITNALNYNPKSEKLWLKATDLET---NNINKRKVLMKG 353
Query: 175 VQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTA-- 232
++ P N W E + + K LLK + L + Y+ S
Sbjct: 354 LEKIPNNDQLWEKLIELENDPNMVKK--LLLKAVQLCSQNWEFWSALLNISNYEESKKIL 411
Query: 233 NLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDT 268
N ARK + I VWI +E +E +T
Sbjct: 412 NQARKSIKGVKNI----LKVWITACQLEEREYGEET 443
>UNIPROTKB|Q59PD7 [details] [associations]
symbol:PRP6 "Putative uncharacterized protein PRP6"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR003107
InterPro:IPR010491 InterPro:IPR011990 Pfam:PF06424 SMART:SM00386
CGD:CAL0001343 GO:GO:0005634 eggNOG:COG0457 Gene3D:1.25.40.10
GO:GO:0000398 EMBL:AACQ01000192 EMBL:AACQ01000189 KO:K12855
InterPro:IPR027108 PANTHER:PTHR11246:SF1 RefSeq:XP_711574.1
RefSeq:XP_711643.1 ProteinModelPortal:Q59PD7 STRING:Q59PD7
GeneID:3646751 GeneID:3646834 KEGG:cal:CaO19.13713
KEGG:cal:CaO19.6356 Uniprot:Q59PD7
Length = 911
Score = 136 (52.9 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 72/294 (24%), Positives = 129/294 (43%)
Query: 2 KCIDYWPEDGRPYVALGKVLSKQSK-VAEARAIYAKGSQATQGENPYIWQC-WAVLENKL 59
K I P+ Y+ K + SK + +AR+I G A NP +A+++ +L
Sbjct: 561 KAISLNPQVPLFYLMYAKDKWQLSKDIPQARSILNSGELA----NPTDLSIKFAIIKLEL 616
Query: 60 --GNIGKA----RELFDASTVADKGHIAAWHGWA-VLELRQGNIKKARQLLAKGLKFCGG 112
GN+ A + + D + + W+ + +L +I + ++ K LK
Sbjct: 617 ITGNLLNAEKYIKHIIDTKPMESEKF---WYKYIHILRCLNSDITVLKDVIQKALKLFPN 673
Query: 113 NEYIY-QTLALLEAKANRYEQAR-NLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQL 170
+Y Q + +LE + EQAR N KC P+ WI SQ++ + + + AR +
Sbjct: 674 CWKLYLQNIQILE-DIDELEQARENALVGVKKC-PQCIYLWIKLSQIDEKAQIIIRARSI 731
Query: 171 FERAVQASPKNRFAWHVWGI-FEANMGFIDKGKKLLKIGHAVNPRDPVL-LQSLALLEYK 228
++A+ +P N W V+ I FE +G + + L P DP L + +L+L+ K
Sbjct: 732 LDQAILQNPNNPEIW-VYKIQFEKRIGNLSSLQNLTNKALKQFPTDPWLWIINLSLIP-K 789
Query: 229 YSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDST 282
S + +F A + + + G W +G ++ +ER+L D+T
Sbjct: 790 MSQR---KTIFLDALKATNNSNLILLISGVFFWFDGKYSKSKNWFERSLQSDNT 840
Score = 120 (47.3 bits), Expect = 0.0010, P = 0.0010
Identities = 52/216 (24%), Positives = 90/216 (41%)
Query: 56 ENKLGNIGKARELFDASTVADKGHIAAWHGWAVLELRQG-NIKKARQLLAKGLKFCGGNE 114
++K N+ K R + + ++ ++W A LE + G N+K A+Q + +G K C N+
Sbjct: 239 DSKYANLQKNRVILSSLRKSEPYKPSSWISSARLEEQDGKNLKLAKQYILEGCKKCPRND 298
Query: 115 YIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERA 174
I+ L + + + + L A NPKS W+ + +E NN+ R++ +
Sbjct: 299 EIW--LENIRLNQSDIKLCKQLITNALNYNPKSEKLWLKATDLET---NNINKRKVLMKG 353
Query: 175 VQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTA-- 232
++ P N W E + + K LLK + L + Y+ S
Sbjct: 354 LEKIPNNDQLWEKLIELENDPNMVKK--LLLKAVQLCSQNWEFWSALLNISNYEESKKIL 411
Query: 233 NLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDT 268
N ARK + I VWI +E +E +T
Sbjct: 412 NQARKSIKGVKNI----LKVWITACQLEEREYGEET 443
>UNIPROTKB|F6RY07 [details] [associations]
symbol:XAB2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006283 "transcription-coupled nucleotide-excision repair"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0006396 "RNA processing" evidence=IEA] InterPro:IPR003107
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
PROSITE:PS50005 PROSITE:PS50293 SMART:SM00386 GO:GO:0006351
GO:GO:0006396 Gene3D:1.25.40.10 InterPro:IPR013105 Pfam:PF07719
GO:GO:0071013 GO:GO:0001824 GO:GO:0006283 OMA:PRSYKLW
GeneTree:ENSGT00550000075140 EMBL:DAAA02019501 IPI:IPI00700985
Ensembl:ENSBTAT00000015097 Uniprot:F6RY07
Length = 855
Score = 135 (52.6 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 76/291 (26%), Positives = 128/291 (43%)
Query: 19 KVLSKQSKVAEARAIYAKGSQATQG---ENPYIWQCWAVLENKLGNIGKARELFDASTVA 75
++L K + + RA Y GS+ Q ++ +W A LE LG + ++D +
Sbjct: 454 RLLRKATALPARRAEYFDGSEPVQNRVYKSLKVWSMLADLEESLGTFQSTKAVYDR--IL 511
Query: 76 DKGHIAAWH---GWAVLELRQGNIKKARQLLAKGLK-FCGGN-EYIYQT-LALLEAK--A 127
D IA +A+ +++ + +G+ F N I+ T L A+
Sbjct: 512 DL-RIATPQIVINYAMFLEEHKYFEESFKAYERGISLFKWPNVSDIWSTYLTKFIARYGG 570
Query: 128 NRYEQARNLFRQATK-CNPKSCAS-WIAWSQMEMQQENNLA--ARQLFERAVQA-SPKNR 182
+ E+AR+LF QA C PK + ++ ++Q+E +E LA A ++ERA +A P +
Sbjct: 571 RKLERARDLFEQALDGCPPKYAKTLYLLYAQLE--EEWGLARHAMAVYERATRAVEPAQQ 628
Query: 183 F---------AWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTAN 233
+ A ++G+ K ++L HA R+ L A +E K +
Sbjct: 629 YDMFNIYIKRAAEIYGVTHTR-SIYQKAIEVLSDEHA---REMCL--RFADMECKLGEID 682
Query: 234 LARKLFRRASEI-DPRHQPV-WIAWGWMEWKEGNLDTARELYERALSIDST 282
AR ++ S+I DPR W W E + GN DT RE+ S+ +T
Sbjct: 683 RARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTIREMLRIRRSVQAT 733
>UNIPROTKB|Q8IUR5 [details] [associations]
symbol:TMTC1 "Transmembrane and TPR repeat-containing
protein 1" species:9606 "Homo sapiens" [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR001440 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF00515 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 GO:GO:0016021 GO:GO:0005739 eggNOG:COG0457
Gene3D:1.25.40.10 HSSP:O15294 EMBL:AC012151 InterPro:IPR013618
Pfam:PF08409 EMBL:GQ865601 EMBL:AK055962 EMBL:AK127297
EMBL:AC009320 EMBL:AC009510 EMBL:AC022078 EMBL:BC028716
EMBL:BC042083 EMBL:AF319520 IPI:IPI00043430 IPI:IPI00216822
IPI:IPI00444554 IPI:IPI00795924 IPI:IPI00977296
RefSeq:NP_001180380.1 RefSeq:NP_787057.2 UniGene:Hs.401954
ProteinModelPortal:Q8IUR5 SMR:Q8IUR5 STRING:Q8IUR5
PhosphoSite:Q8IUR5 DMDM:269849473 PaxDb:Q8IUR5 PRIDE:Q8IUR5
Ensembl:ENST00000256062 Ensembl:ENST00000381224
Ensembl:ENST00000539277 GeneID:83857 KEGG:hsa:83857 UCSC:uc001riy.3
UCSC:uc001riz.3 UCSC:uc001rja.3 UCSC:uc001rjc.1 CTD:83857
GeneCards:GC12M029653 HGNC:HGNC:24099 HPA:HPA016720
neXtProt:NX_Q8IUR5 PharmGKB:PA142670718 HOVERGEN:HBG106148
InParanoid:Q8IUR5 OrthoDB:EOG41C6VN ChiTaRS:TMTC1 GenomeRNAi:83857
NextBio:72853 ArrayExpress:Q8IUR5 Bgee:Q8IUR5 CleanEx:HS_TMTC1
Genevestigator:Q8IUR5 Uniprot:Q8IUR5
Length = 882
Score = 135 (52.6 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 64/301 (21%), Positives = 111/301 (36%)
Query: 4 IDYWPEDGRPYVALGKVLSKQSKVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIG 63
I Y PE Y +L +L++Q + EA IY G + + + + V G
Sbjct: 575 IKYGPEFADAYSSLASLLAEQERFKEAEEIYQTGIKNCPDSSD-LHNNYGVFLVDTGLPE 633
Query: 64 KARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALL 123
KA + + H A L G A + + L+ E I L L
Sbjct: 634 KAVAHYQQAIKLSPSHHVAMVNLGRLYRSLGENSMAEEWYKRALQVAHKAE-ILSPLGAL 692
Query: 124 EAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRF 183
RYE+A ++++A P +A +Q+ A ++ V
Sbjct: 693 YYNTGRYEEALQIYQEAAALQPSQRELRLALAQVLAVMGQTKEAEKMTNHIVSEETGCLE 752
Query: 184 AWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLE-YKYSTANLARKLF--- 239
+ + + DK + + P+DP ++ L + + NL K F
Sbjct: 753 CYRLLSAIYSKQENHDKALDAIDKALQLKPKDPKVISELFFTKGNQLREQNLLDKAFESY 812
Query: 240 RRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQR 299
R A +++P W+ G ++ +G +AR YERAL + ++ L LE+R
Sbjct: 813 RVAVQLNPDQAQAWMNMGGIQHIKGKYVSARAYYERALQLVPDSKLLKENLAKLDRLEKR 872
Query: 300 V 300
+
Sbjct: 873 L 873
>RGD|1564868 [details] [associations]
symbol:Tmtc1 "transmembrane and tetratricopeptide repeat
containing 1" species:10116 "Rattus norvegicus" [GO:0005739
"mitochondrion" evidence=ISO] InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
RGD:1564868 Gene3D:1.25.40.10 InterPro:IPR013105 Pfam:PF07719
GeneTree:ENSGT00550000074327 InterPro:IPR013618 Pfam:PF08409
IPI:IPI00949555 ProteinModelPortal:D4A9Y4
Ensembl:ENSRNOT00000002535 UCSC:RGD:1564868 ArrayExpress:D4A9Y4
Uniprot:D4A9Y4
Length = 905
Score = 135 (52.6 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 61/301 (20%), Positives = 113/301 (37%)
Query: 4 IDYWPEDGRPYVALGKVLSKQSKVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIG 63
I Y P+ Y +L +L++Q + EA +Y G + + + +AV G
Sbjct: 598 IKYGPDFADAYSSLASLLAEQERFKEAEDVYQAGIKNCPDSSD-LHNNYAVFLVDSGFPE 656
Query: 64 KARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALL 123
KA + + H A L G A + + L+ E + L L
Sbjct: 657 KAVAHYQQAIQLSPSHHVAVVNLGRLHRSLGENSMAEEWYRRALQVARTAE-VLSPLGAL 715
Query: 124 EAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRF 183
R+++A ++R+A P +A +Q+ A ++ V P+
Sbjct: 716 YYNTGRHKEALEVYREAVSLQPSQRDLRLALAQVLAVMGQTKEAEKITSHIVSEEPRCLE 775
Query: 184 AWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLE-YKYSTANLARKLFRR- 241
+ + + +K + ++ + P+DP ++ L + + NL K F
Sbjct: 776 CYRLLSAIYSKQEHHEKALEAIEKALQLKPKDPKVISELFFTKGNQLREQNLLDKAFESY 835
Query: 242 --ASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQR 299
A +DP W+ G + +G+ AR YERAL + ++ L LE+R
Sbjct: 836 EAAVTLDPDQAQAWMNMGGIRHIQGSYVPARVYYERALRLVPESKLLKENLAKLDRLERR 895
Query: 300 V 300
+
Sbjct: 896 L 896
>WB|WBGene00018175 [details] [associations]
symbol:F38B6.6 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR001440
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF00515 Pfam:PF13176 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 GO:GO:0016021 eggNOG:COG0457 Gene3D:1.25.40.10
InterPro:IPR013105 Pfam:PF07719 HSSP:O15294
GeneTree:ENSGT00550000074327 EMBL:FO080973 PIR:T16298
RefSeq:NP_509123.2 ProteinModelPortal:Q20144 SMR:Q20144
EnsemblMetazoa:F38B6.6.1 EnsemblMetazoa:F38B6.6.2 GeneID:185454
KEGG:cel:CELE_F38B6.6 UCSC:F38B6.6 CTD:185454 WormBase:F38B6.6
HOGENOM:HOG000007190 InParanoid:Q20144 OMA:GYCMLLT NextBio:928344
InterPro:IPR013618 Pfam:PF08409 Uniprot:Q20144
Length = 690
Score = 133 (51.9 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 49/231 (21%), Positives = 90/231 (38%)
Query: 92 RQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASW 151
R G K L + GL C N I+ L + + A + A K +P +
Sbjct: 410 RSGEWKTELSLYSSGLSVCPTNAKIHYNLGKVLGDNGLTKDAEKNYWNAIKLDPSYEQAL 469
Query: 152 IAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAV 211
+ + ++ A L RAV P AW GI + N+ + +K LK +
Sbjct: 470 NNLGNLLEKSGDSKTAESLLARAVTLRPSFAVAWMNLGISQMNLKKYYEAEKSLKNSLLI 529
Query: 212 NPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARE 271
P L +L +L + + +A ++ A+ IDP H W + +L +
Sbjct: 530 RPNSAHCLFNLGVLYQRTNRDEMAMSAWKNATRIDPSHSQSWTN---LFVVLDHLSQCSQ 586
Query: 272 LYERALSIDSTTESAARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYI 322
+ + + S+ + +R G + N +AA +S++++N S +
Sbjct: 587 VIDLSYQALSSVPNESRVHMQIGSCHAKHSNFTAAENHIKSAIDLNPTSVL 637
>ZFIN|ZDB-GENE-040426-685 [details] [associations]
symbol:xab2 "XPA binding protein 2" species:7955
"Danio rerio" [GO:0006396 "RNA processing" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR003107
InterPro:IPR011990 InterPro:IPR013026 PROSITE:PS50293 SMART:SM00386
ZFIN:ZDB-GENE-040426-685 GO:GO:0005622 GO:GO:0006396
Gene3D:1.25.40.10 InterPro:IPR013105 Pfam:PF07719
HOVERGEN:HBG024066 EMBL:BC056771 IPI:IPI00614939 UniGene:Dr.12501
ProteinModelPortal:Q6PGZ8 STRING:Q6PGZ8 InParanoid:Q6PGZ8
ArrayExpress:Q6PGZ8 Uniprot:Q6PGZ8
Length = 851
Score = 132 (51.5 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 72/294 (24%), Positives = 122/294 (41%)
Query: 14 YVALGKVLSKQSKVAEARAIYAKGSQATQG---ENPYIWQCWAVLENKLGNIGKARELFD 70
Y ++L K + + +A Y S+ Q ++ +W A LE LG + ++D
Sbjct: 444 YDQASRILRKATAIPARKAEYFDSSEPVQNRVYKSLKVWSMLADLEESLGTFQSTKAVYD 503
Query: 71 ASTVADKGHIAAWH---GWAVLELRQGNIKKARQLLAKGLK-FCGGNEY----IYQTLAL 122
+ D IA +A+ +++ + +G+ F N + Y T +
Sbjct: 504 R--IIDL-RIATPQIIINYAMFLEEHNYFEESFKAYERGIALFKWPNVHDIWNTYLTKFI 560
Query: 123 LEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLA--ARQLFERA---VQA 177
+ E+AR+LF QA P A I ++++E LA A ++ERA V+A
Sbjct: 561 DRYGGKKLERARDLFEQALDGCPAKYAKTIYLLYAKLEEEYGLARHAMAVYERATAAVEA 620
Query: 178 SPKNRF-------AWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYS 230
+++ A ++G+ K ++L HA RD L A +E K
Sbjct: 621 EERHQMFNIYIKRAAEIYGVTHTR-AIYQKAIEVLPDEHA---RDMCL--RFADMESKLG 674
Query: 231 TANLARKLFRRASEI-DPRHQP-VWIAWGWMEWKEGNLDTARELYERALSIDST 282
+ AR ++ S+I DPR W W E + GN DT RE+ S+ +T
Sbjct: 675 EIDRARAIYSYCSQICDPRVTAHFWQTWKEFEIRHGNEDTIREMLRIKRSVQAT 728
>UNIPROTKB|A7MB10 [details] [associations]
symbol:PDCD11 "Protein RRP5 homolog" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR003029 InterPro:IPR003107 InterPro:IPR008847
InterPro:IPR011990 InterPro:IPR013026 Pfam:PF00575 Pfam:PF05843
PROSITE:PS50126 SMART:SM00386 GO:GO:0005730 GO:GO:0006397
GO:GO:0003723 Gene3D:1.25.40.10 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0006364 InterPro:IPR022967
SMART:SM00316 EMBL:BC151277 IPI:IPI00867038 RefSeq:NP_001095573.1
UniGene:Bt.23141 ProteinModelPortal:A7MB10 SMR:A7MB10 PRIDE:A7MB10
GeneID:526867 KEGG:bta:526867 CTD:22984 eggNOG:COG0539
HOGENOM:HOG000088607 HOVERGEN:HBG108419 KO:K14792 NextBio:20874464
Uniprot:A7MB10
Length = 1874
Score = 135 (52.6 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 51/228 (22%), Positives = 98/228 (42%)
Query: 60 GNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLK---FCGGNEYI 116
G ++ E FD ++ W + L+ I+KAR + + LK F E +
Sbjct: 1602 GRQPESAEDFDRLVLSSPSSSLLWLQYMAFHLQATEIEKARAVAERALKTISFREEQEKL 1661
Query: 117 YQTLALLEAKANRY---EQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFER 173
+ALL + N Y E +F +A + N + ++ + + + E A +L+ R
Sbjct: 1662 NVWVALLNLE-NMYGSQESLTKVFERAVQYN-EPLKVFLHLADIYTKSEKFQEAGELYNR 1719
Query: 174 AVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPR-DPV-LLQSLALLEYKYST 231
++ + + W +G F G + ++++ P+ + V ++ A LE++
Sbjct: 1720 MLKRFRQEKAVWVKYGAFLLRRGKAEASHRVMQRALECLPKKEHVDVIAKFAQLEFQLGD 1779
Query: 232 ANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSI 279
A AR +F I P+ VW + M K G+ AR ++ER + +
Sbjct: 1780 AERARAIFESTLSIYPKRTDVWSVYIDMIIKHGSQKEARAIFERVIHL 1827
>UNIPROTKB|G5E5C4 [details] [associations]
symbol:PDCD11 "Protein RRP5 homolog" species:9913 "Bos
taurus" [GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR003029
InterPro:IPR003107 InterPro:IPR008847 InterPro:IPR011990
InterPro:IPR013026 Pfam:PF00575 Pfam:PF05843 PROSITE:PS50126
PROSITE:PS50293 SMART:SM00386 GO:GO:0005829 GO:GO:0005634
GO:GO:0006397 GO:GO:0003723 Gene3D:1.25.40.10 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR022967 SMART:SM00316
UniGene:Bt.23141 OMA:LHLADIY GeneTree:ENSGT00390000012228
EMBL:DAAA02059036 EMBL:DAAA02059037 Ensembl:ENSBTAT00000012818
Uniprot:G5E5C4
Length = 1874
Score = 135 (52.6 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 51/228 (22%), Positives = 98/228 (42%)
Query: 60 GNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLK---FCGGNEYI 116
G ++ E FD ++ W + L+ I+KAR + + LK F E +
Sbjct: 1602 GRQPESAEDFDRLVLSSPSSSLLWLQYMAFHLQATEIEKARAVAERALKTISFREEQEKL 1661
Query: 117 YQTLALLEAKANRY---EQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFER 173
+ALL + N Y E +F +A + N + ++ + + + E A +L+ R
Sbjct: 1662 NVWVALLNLE-NMYGSQESLTKVFERAVQYN-EPLKVFLHLADIYTKSEKFQEAGELYNR 1719
Query: 174 AVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPR-DPV-LLQSLALLEYKYST 231
++ + + W +G F G + ++++ P+ + V ++ A LE++
Sbjct: 1720 MLKRFRQEKAVWVKYGAFLLRRGKAEASHRVMQRALECLPKKEHVDVIAKFAQLEFQLGD 1779
Query: 232 ANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSI 279
A AR +F I P+ VW + M K G+ AR ++ER + +
Sbjct: 1780 AERARAIFESTLSIYPKRTDVWSVYIDMIIKHGSQKEARAIFERVIHL 1827
>GENEDB_PFALCIPARUM|PFD0180c [details] [associations]
symbol:PFD0180c "CGI-201 protein, short form"
species:5833 "Plasmodium falciparum" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0000245 "spliceosomal complex assembly"
evidence=ISS] InterPro:IPR003107 InterPro:IPR011990
InterPro:IPR013026 PROSITE:PS50293 SMART:SM00386 GO:GO:0003723
GO:GO:0005622 Gene3D:1.25.40.10 EMBL:AL844503 GO:GO:0000245
KO:K12869 HOGENOM:HOG000207972 OMA:KFTFAKI RefSeq:XP_001351349.1
ProteinModelPortal:Q8I1Z2 EnsemblProtists:PFD0180c:mRNA
GeneID:812468 KEGG:pfa:PFD0180c EuPathDB:PlasmoDB:PF3D7_0403700
ProtClustDB:CLSZ2429136 Uniprot:Q8I1Z2
Length = 780
Score = 130 (50.8 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 58/283 (20%), Positives = 119/283 (42%)
Query: 80 IAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQ 139
I+ + + + E++Q +I++ R + + L N+ ++ +E ARNL +
Sbjct: 71 ISTYIKYGLWEIKQKDIERCRSIFERALNIDYTNKNLWLKYIEVELINKNINSARNLLER 130
Query: 140 ATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQAS-PKNRFAWHVWGIFEANMGFI 198
P W ++ +E N + AR ++ER ++ ++ F +++ FE I
Sbjct: 131 VVLLLPLENIFWKKYAHLEEILNNYVNARNIYERWIKFKIDESSFLCYIY--FEERCNEI 188
Query: 199 DKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDPR---HQPVWIA 255
+K +++ + P+ + + E KY AR + + E+ P + +I
Sbjct: 189 NKCREIFERLIVSIPKLECFYKFIKF-EKKYKNIVRARAAYEKCIELLPSCYIDENFYIH 247
Query: 256 WGWMEWKEGNLDTARELYERALSIDSTTESAA---RCLQ---AWGVLEQRVGNLSAARRL 309
+ E ++ + +++Y AL I +S LQ + ++ +L R+
Sbjct: 248 FCNFEEEQNEYERCKKIYIEALKILPKNKSELLYKNFLQFQKKYANKDELHESLLIKERI 307
Query: 310 F-RSSLNINSQSYITWMTWAQLEEDQGNSVRAEE----IRNLY 347
F L N Y W + +LEE N++ E+ IR+LY
Sbjct: 308 FYEDELKKNKNDYDIWFNYIKLEESNINNINKEKCIIRIRDLY 350
Score = 126 (49.4 bits), Expect = 0.00018, P = 0.00018
Identities = 39/165 (23%), Positives = 71/165 (43%)
Query: 47 YIWQCWAVLENKLG-NIGKARELFDASTVADKGHIAAWHG----WAVLELRQGNIKKARQ 101
Y+W +++ E NI +AR++++ + + +A ELRQ N+ KAR
Sbjct: 371 YLWINYSIFEELYAQNIQRARDVYNNIIKILSSYEFTFKKIFILYATFELRQLNVNKARS 430
Query: 102 LLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQ 161
+ L+ NE I++ E K + RN++ + + P + +WI+ E+
Sbjct: 431 IFNNALQTIP-NEKIFEKFCEFELKLGNIRECRNVYAKYVEAFPFNSKAWISMINFELSL 489
Query: 162 ENNLAARQLFERAVQASPKN--RFAWHVWGIFEANMGFIDKGKKL 204
+ ARQ+ E A+ W + E N+ D +KL
Sbjct: 490 DEVERARQIAEIAINLDDMKLPELIWKNYIDMEINLQEYDNARKL 534
Score = 124 (48.7 bits), Expect = 0.00030, P = 0.00030
Identities = 49/225 (21%), Positives = 104/225 (46%)
Query: 77 KGHIAAWHGWAVLE-LRQGNIKKARQLLAKGLKFCGGNEYIYQTLALL----EAKANRYE 131
K +I W +++ E L NI++AR + +K E+ ++ + +L E +
Sbjct: 367 KRYIYLWINYSIFEELYAQNIQRARDVYNNIIKILSSYEFTFKKIFILYATFELRQLNVN 426
Query: 132 QARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVWGIF 191
+AR++F A + P + + + E++ N R ++ + V+A P N AW F
Sbjct: 427 KARSIFNNALQTIPNE-KIFEKFCEFELKLGNIRECRNVYAKYVEAFPFNSKAWISMINF 485
Query: 192 EANMGFIDKGKKLLKIGHAVNPRD---PVLL-QSLALLEYKYSTANLARKLFRRASEIDP 247
E ++ +++ +++ +I A+N D P L+ ++ +E + ARKL+ R I
Sbjct: 486 ELSLDEVERARQIAEI--AINLDDMKLPELIWKNYIDMEINLQEYDNARKLYDRLLNIT- 542
Query: 248 RHQPVWIAWGWMEWKE-GNLDTARELYERALSIDSTTESA-ARCL 290
+H V+ ++ + +++ R++ E + E RC+
Sbjct: 543 QHYKVYKSYAEFTYIYLDDIEMCRKILEEGIEFCKKNELINERCI 587
>UNIPROTKB|Q8I1Z2 [details] [associations]
symbol:PFD0180c "CGI-201 protein, short form" species:36329
"Plasmodium falciparum 3D7" [GO:0000245 "spliceosomal complex
assembly" evidence=ISS] [GO:0003723 "RNA binding" evidence=ISS]
InterPro:IPR003107 InterPro:IPR011990 InterPro:IPR013026
PROSITE:PS50293 SMART:SM00386 GO:GO:0003723 GO:GO:0005622
Gene3D:1.25.40.10 EMBL:AL844503 GO:GO:0000245 KO:K12869
HOGENOM:HOG000207972 OMA:KFTFAKI RefSeq:XP_001351349.1
ProteinModelPortal:Q8I1Z2 EnsemblProtists:PFD0180c:mRNA
GeneID:812468 KEGG:pfa:PFD0180c EuPathDB:PlasmoDB:PF3D7_0403700
ProtClustDB:CLSZ2429136 Uniprot:Q8I1Z2
Length = 780
Score = 130 (50.8 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 58/283 (20%), Positives = 119/283 (42%)
Query: 80 IAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQ 139
I+ + + + E++Q +I++ R + + L N+ ++ +E ARNL +
Sbjct: 71 ISTYIKYGLWEIKQKDIERCRSIFERALNIDYTNKNLWLKYIEVELINKNINSARNLLER 130
Query: 140 ATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQAS-PKNRFAWHVWGIFEANMGFI 198
P W ++ +E N + AR ++ER ++ ++ F +++ FE I
Sbjct: 131 VVLLLPLENIFWKKYAHLEEILNNYVNARNIYERWIKFKIDESSFLCYIY--FEERCNEI 188
Query: 199 DKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDPR---HQPVWIA 255
+K +++ + P+ + + E KY AR + + E+ P + +I
Sbjct: 189 NKCREIFERLIVSIPKLECFYKFIKF-EKKYKNIVRARAAYEKCIELLPSCYIDENFYIH 247
Query: 256 WGWMEWKEGNLDTARELYERALSIDSTTESAA---RCLQ---AWGVLEQRVGNLSAARRL 309
+ E ++ + +++Y AL I +S LQ + ++ +L R+
Sbjct: 248 FCNFEEEQNEYERCKKIYIEALKILPKNKSELLYKNFLQFQKKYANKDELHESLLIKERI 307
Query: 310 F-RSSLNINSQSYITWMTWAQLEEDQGNSVRAEE----IRNLY 347
F L N Y W + +LEE N++ E+ IR+LY
Sbjct: 308 FYEDELKKNKNDYDIWFNYIKLEESNINNINKEKCIIRIRDLY 350
Score = 126 (49.4 bits), Expect = 0.00018, P = 0.00018
Identities = 39/165 (23%), Positives = 71/165 (43%)
Query: 47 YIWQCWAVLENKLG-NIGKARELFDASTVADKGHIAAWHG----WAVLELRQGNIKKARQ 101
Y+W +++ E NI +AR++++ + + +A ELRQ N+ KAR
Sbjct: 371 YLWINYSIFEELYAQNIQRARDVYNNIIKILSSYEFTFKKIFILYATFELRQLNVNKARS 430
Query: 102 LLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQ 161
+ L+ NE I++ E K + RN++ + + P + +WI+ E+
Sbjct: 431 IFNNALQTIP-NEKIFEKFCEFELKLGNIRECRNVYAKYVEAFPFNSKAWISMINFELSL 489
Query: 162 ENNLAARQLFERAVQASPKN--RFAWHVWGIFEANMGFIDKGKKL 204
+ ARQ+ E A+ W + E N+ D +KL
Sbjct: 490 DEVERARQIAEIAINLDDMKLPELIWKNYIDMEINLQEYDNARKL 534
Score = 124 (48.7 bits), Expect = 0.00030, P = 0.00030
Identities = 49/225 (21%), Positives = 104/225 (46%)
Query: 77 KGHIAAWHGWAVLE-LRQGNIKKARQLLAKGLKFCGGNEYIYQTLALL----EAKANRYE 131
K +I W +++ E L NI++AR + +K E+ ++ + +L E +
Sbjct: 367 KRYIYLWINYSIFEELYAQNIQRARDVYNNIIKILSSYEFTFKKIFILYATFELRQLNVN 426
Query: 132 QARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVWGIF 191
+AR++F A + P + + + E++ N R ++ + V+A P N AW F
Sbjct: 427 KARSIFNNALQTIPNE-KIFEKFCEFELKLGNIRECRNVYAKYVEAFPFNSKAWISMINF 485
Query: 192 EANMGFIDKGKKLLKIGHAVNPRD---PVLL-QSLALLEYKYSTANLARKLFRRASEIDP 247
E ++ +++ +++ +I A+N D P L+ ++ +E + ARKL+ R I
Sbjct: 486 ELSLDEVERARQIAEI--AINLDDMKLPELIWKNYIDMEINLQEYDNARKLYDRLLNIT- 542
Query: 248 RHQPVWIAWGWMEWKE-GNLDTARELYERALSIDSTTESA-ARCL 290
+H V+ ++ + +++ R++ E + E RC+
Sbjct: 543 QHYKVYKSYAEFTYIYLDDIEMCRKILEEGIEFCKKNELINERCI 587
>UNIPROTKB|F1NX56 [details] [associations]
symbol:OGT "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000123 "histone acetyltransferase complex"
evidence=IEA] [GO:0005547 "phosphatidylinositol-3,4,5-trisphosphate
binding" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0006110 "regulation
of glycolysis" evidence=IEA] [GO:0006917 "induction of apoptosis"
evidence=IEA] [GO:0008047 "enzyme activator activity" evidence=IEA]
[GO:0030854 "positive regulation of granulocyte differentiation"
evidence=IEA] [GO:0032868 "response to insulin stimulus"
evidence=IEA] [GO:0035020 "regulation of Rac protein signal
transduction" evidence=IEA] [GO:0043995 "histone acetyltransferase
activity (H4-K5 specific)" evidence=IEA] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=IEA]
[GO:0045862 "positive regulation of proteolysis" evidence=IEA]
[GO:0046626 "regulation of insulin receptor signaling pathway"
evidence=IEA] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=IEA] [GO:0048015
"phosphatidylinositol-mediated signaling" evidence=IEA] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=IEA]
[GO:0070688 "MLL5-L complex" evidence=IEA] [GO:0071300 "cellular
response to retinoic acid" evidence=IEA] InterPro:IPR001440
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF00515 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
GO:GO:0005886 GO:GO:0005813 GO:GO:0006917 GO:GO:0071300
GO:GO:0032868 Gene3D:1.25.40.10 GO:GO:0070688 GO:GO:0005547
GO:GO:0035020 GO:GO:0048015 GO:GO:0045862 GO:GO:0008047
GO:GO:0051571 GO:GO:0000123 GO:GO:0030854 GO:GO:0046626
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00550000074327 KO:K09667 OMA:LAYMPNT CTD:8473
EMBL:AADN02013225 EMBL:AADN02013226 IPI:IPI00603062
RefSeq:XP_001232519.1 UniGene:Gga.4064 ProteinModelPortal:F1NX56
PRIDE:F1NX56 Ensembl:ENSGALT00000008713 GeneID:422203
KEGG:gga:422203 NextBio:20824871 ArrayExpress:F1NX56 Uniprot:F1NX56
Length = 1035
Score = 131 (51.2 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 66/299 (22%), Positives = 120/299 (40%)
Query: 44 ENPYIWQCWAVLEN---KLGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKAR 100
+NP + + ++ L N + G + +A E + + I + A + G+++ A
Sbjct: 74 QNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAV 133
Query: 101 QLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQM--- 157
Q L++ + L L R E+A+ + +A + P +AWS +
Sbjct: 134 QAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFA---VAWSNLGCV 190
Query: 158 -EMQQENNLAARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDP 216
Q E LA FE+AV P A+ G D+ +++P
Sbjct: 191 FNAQGEIWLAIHH-FEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHA 249
Query: 217 VLLQSLALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERA 276
V+ +LA + Y+ +LA +RRA E+ P + ++G++ A E Y A
Sbjct: 250 VVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEECYNTA 309
Query: 277 LSIDSTTESAARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQG 335
L + T A L +++ GN+ A RL+R +L + + A + + QG
Sbjct: 310 LRLCPTH---ADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQG 365
>UNIPROTKB|Q5LPE5 [details] [associations]
symbol:SPO2903 "TPR/sulfotransferase domain protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001440
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF00515 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0016740
Gene3D:1.25.40.10 RefSeq:YP_168111.1 ProteinModelPortal:Q5LPE5
GeneID:3193569 KEGG:sil:SPO2903 PATRIC:23379231 OMA:WASARIH
Uniprot:Q5LPE5
Length = 582
Score = 128 (50.1 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 54/205 (26%), Positives = 81/205 (39%)
Query: 85 GW----AVLELRQGNIKKARQLLAKGLK----FCGGNEYIYQTLALLEAKANRYEQARNL 136
GW A+ E G K A LK F + QTL +L R ++A
Sbjct: 36 GWLNLAAIAESGLGRPKAALPHFQLALKLAPDFHDARRNLAQTLVIL----GRLDEAERH 91
Query: 137 FRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVWGIFEANMG 196
+Q T NP+ +W SQ M + + AA +R V P + +G
Sbjct: 92 LQQLTGTNPQDAEAWALLSQAAMGRGDGDAALAAADRYVDLRPGQARGLMLRATLHGRLG 151
Query: 197 FIDKGKKLLKIGHA--VNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDPRHQPVWI 254
D+ L + A P + LL +L+L + A + RRA E+ PRH P +
Sbjct: 152 --DEAAALADLQQAQMAEPDNVDLLIALSLPLARADHPGAAIDVARRAVELAPRHIPARL 209
Query: 255 AWGWMEWKEGNLDTARELYERALSI 279
++G+ D A+ +Y R L I
Sbjct: 210 TLAMRHVEQGDSDAAKAMYHRVLEI 234
>TIGR_CMR|SPO_2903 [details] [associations]
symbol:SPO_2903 "TPR/sulfotransferase domain protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008146
"sulfotransferase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001440
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF00515 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0016740
Gene3D:1.25.40.10 RefSeq:YP_168111.1 ProteinModelPortal:Q5LPE5
GeneID:3193569 KEGG:sil:SPO2903 PATRIC:23379231 OMA:WASARIH
Uniprot:Q5LPE5
Length = 582
Score = 128 (50.1 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 54/205 (26%), Positives = 81/205 (39%)
Query: 85 GW----AVLELRQGNIKKARQLLAKGLK----FCGGNEYIYQTLALLEAKANRYEQARNL 136
GW A+ E G K A LK F + QTL +L R ++A
Sbjct: 36 GWLNLAAIAESGLGRPKAALPHFQLALKLAPDFHDARRNLAQTLVIL----GRLDEAERH 91
Query: 137 FRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVWGIFEANMG 196
+Q T NP+ +W SQ M + + AA +R V P + +G
Sbjct: 92 LQQLTGTNPQDAEAWALLSQAAMGRGDGDAALAAADRYVDLRPGQARGLMLRATLHGRLG 151
Query: 197 FIDKGKKLLKIGHA--VNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDPRHQPVWI 254
D+ L + A P + LL +L+L + A + RRA E+ PRH P +
Sbjct: 152 --DEAAALADLQQAQMAEPDNVDLLIALSLPLARADHPGAAIDVARRAVELAPRHIPARL 209
Query: 255 AWGWMEWKEGNLDTARELYERALSI 279
++G+ D A+ +Y R L I
Sbjct: 210 TLAMRHVEQGDSDAAKAMYHRVLEI 234
>ZFIN|ZDB-GENE-030131-9631 [details] [associations]
symbol:ogt.1 "O-linked N-acetylglucosamine
(GlcNAc) transferase
(UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl
transferase) 1" species:7955 "Danio rerio" [GO:0016262 "protein
N-acetylglucosaminyltransferase activity" evidence=IMP;IDA]
[GO:0006493 "protein O-linked glycosylation" evidence=IDA]
[GO:0016740 "transferase activity" evidence=IEA] InterPro:IPR001440
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF00515 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
ZFIN:ZDB-GENE-030131-9631 GO:GO:0006493 Gene3D:1.25.40.10
GO:GO:0016262 HOGENOM:HOG000003765 KO:K09667 HOVERGEN:HBG000351
UniGene:Dr.105209 EMBL:AY696178 IPI:IPI00486762
RefSeq:NP_001017359.1 ProteinModelPortal:Q5GA13 SMR:Q5GA13
STRING:Q5GA13 GeneID:337685 KEGG:dre:337685 CTD:337685
InParanoid:Q5GA13 NextBio:20812366 ArrayExpress:Q5GA13
Uniprot:Q5GA13
Length = 1062
Score = 131 (51.2 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 66/299 (22%), Positives = 120/299 (40%)
Query: 44 ENPYIWQCWAVLEN---KLGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKAR 100
+NP + + ++ L N + G + +A E + + I + A + G+++ A
Sbjct: 84 QNPMLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAV 143
Query: 101 QLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQM--- 157
Q L++ + L L R E+A+ + +A + P +AWS +
Sbjct: 144 QAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFA---VAWSNLGCV 200
Query: 158 -EMQQENNLAARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDP 216
Q E LA FE+AV P A+ G D+ +++P
Sbjct: 201 FNAQGEIWLAIHH-FEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAGYLRALSLSPNHA 259
Query: 217 VLLQSLALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERA 276
V+ +LA + Y+ +LA +RRA E+ P + ++GN+ A E Y A
Sbjct: 260 VVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGNVSEAEECYNTA 319
Query: 277 LSIDSTTESAARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQG 335
L + T A L +++ GN+ A +L+R +L + + A + + QG
Sbjct: 320 LRLCPTH---ADSLNNLANIKREQGNIEEAVQLYRKALEVFPEFAAAHSNLASVLQQQG 375
>CGD|CAL0004743 [details] [associations]
symbol:orf19.332 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0071004
"U2-type prespliceosome" evidence=IEA] [GO:0071006 "U2-type
catalytic step 1 spliceosome" evidence=IEA] [GO:0071008 "U2-type
post-mRNA release spliceosomal complex" evidence=IEA] [GO:0000785
"chromatin" evidence=IEA] [GO:0000974 "Prp19 complex" evidence=IEA]
[GO:0000354 "cis assembly of pre-catalytic spliceosome"
evidence=IEA] [GO:0006270 "DNA replication initiation"
evidence=IEA] [GO:0003688 "DNA replication origin binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
InterPro:IPR003107 InterPro:IPR008847 InterPro:IPR011990
Pfam:PF05843 SMART:SM00386 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GO:GO:0007049 Gene3D:1.25.40.10 EMBL:AACQ01000027
EMBL:AACQ01000026 RefSeq:XP_720027.1 RefSeq:XP_720159.1
ProteinModelPortal:Q5AED6 STRING:Q5AED6 GeneID:3638214
GeneID:3638364 KEGG:cal:CaO19.332 KEGG:cal:CaO19.7964
eggNOG:NOG327505 KO:K12869 Uniprot:Q5AED6
Length = 758
Score = 107 (42.7 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 31/141 (21%), Positives = 56/141 (39%)
Query: 52 WAVLENKLGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCG 111
W + N + +AR + + + + H+ W + LEL NI AR L+ + +
Sbjct: 129 WEIENNH--DFPRARSILERALDVNIQHVPFWIQYIQLELSHKNINHARNLMERAINTLP 186
Query: 112 GNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLF 171
++ E Y R +F + +P + W A+ E + E R +F
Sbjct: 187 RVNKLWFLYVQTEEMLKNYPMVRAVFERWLDWHPDTSV-WDAYINFEARYEEKENVRTIF 245
Query: 172 ERAVQASPKNRFAWHVWGIFE 192
++ V P N W+ W +E
Sbjct: 246 KKYVHEFP-NAGTWYKWIKYE 265
Score = 68 (29.0 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 21/89 (23%), Positives = 43/89 (48%)
Query: 235 ARKLFRRASEIDPRHQ----PVWIAWGWMEWK--EGNLDTARELYERALSIDSTTESAAR 288
AR+++ ++ P VWI + E + E L AR++ RA+ S + +
Sbjct: 450 AREIWNNCLKVIPHKSFTFAKVWIGYSEFELRNSEDGLAKARKILGRAIGQTSINKPKIK 509
Query: 289 CLQAWGVLEQRVGNLSAARRLFRSSLNIN 317
+ + LE+++G+ + R LF+ L ++
Sbjct: 510 IFKYYIDLEKKLGDWNRVRLLFQKWLEVS 538
Score = 63 (27.2 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 29/111 (26%), Positives = 50/111 (45%)
Query: 252 VWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAW-GVLEQRVGN----LSAA 306
+W A+ W E N D+ARE++ L + + + W G E + N L+ A
Sbjct: 434 IWYAF-WEEMTNNNPDSAREIWNNCLKV--IPHKSFTFAKVWIGYSEFELRNSEDGLAKA 490
Query: 307 RRLFRSSL---NINSQSYITWMTWAQLEEDQGNSVRAEEIRNLYFQQRTEV 354
R++ ++ +IN + + LE+ G+ R +R L FQ+ EV
Sbjct: 491 RKILGRAIGQTSINKPKIKIFKYYIDLEKKLGDWNR---VR-LLFQKWLEV 537
>WB|WBGene00016837 [details] [associations]
symbol:C50F2.3 species:6239 "Caenorhabditis elegans"
[GO:0005622 "intracellular" evidence=IEA] [GO:0006396 "RNA
processing" evidence=IEA] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0009790 "embryo
development" evidence=IMP] [GO:0001703 "gastrulation with mouth
forming first" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0051301 "cell division" evidence=IMP] [GO:0000910
"cytokinesis" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
InterPro:IPR003107 InterPro:IPR011990 InterPro:IPR019734
Pfam:PF13181 SMART:SM00386 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0000003 GO:GO:0005622
GO:GO:0006396 GO:GO:0000910 Gene3D:1.25.40.10 InterPro:IPR013105
Pfam:PF07719 GO:GO:0001703 eggNOG:NOG289100 KO:K12867 OMA:PRSYKLW
HOGENOM:HOG000176133 GeneTree:ENSGT00550000075140 EMBL:FO080915
PIR:T29775 RefSeq:NP_491250.1 ProteinModelPortal:P91175 SMR:P91175
IntAct:P91175 STRING:P91175 PaxDb:P91175 EnsemblMetazoa:C50F2.3.1
EnsemblMetazoa:C50F2.3.2 GeneID:171970 KEGG:cel:CELE_C50F2.3
UCSC:C50F2.3 CTD:171970 WormBase:C50F2.3 InParanoid:P91175
NextBio:873471 Uniprot:P91175
Length = 855
Score = 128 (50.1 bits), Expect = 0.00012, P = 0.00012
Identities = 63/261 (24%), Positives = 111/261 (42%)
Query: 39 QATQGENPYIWQCWAVLENKLGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKK 98
QA +P +W +A E G + R+++D +A+ +
Sbjct: 481 QARVHRSPILWAMYADYEECCGTVESCRKVYDKMIELRVASPQMIMNYAMFLEENEYFEL 540
Query: 99 ARQLLAKGL---KFCG----GNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASW 151
A Q KG+ K+ G N Y+ + + K + E+AR+LF Q + P + A +
Sbjct: 541 AFQAYEKGIALFKWPGVFDIWNTYLVKFIKRYGGK--KLERARDLFEQCLENCPPTHAKY 598
Query: 152 IAWSQMEMQQENNLA--ARQLFERAVQASPKNRFAWH-VWGIF---EANMGFIDKGKKLL 205
I ++++E+ LA A ++ RA S +R H ++ I+ M I + + +
Sbjct: 599 IFLLYAKLEEEHGLARHALSIYNRA--CSGVDRADMHSMYNIYIKKVQEMYGIAQCRPIF 656
Query: 206 KIGHAVNPRDPVLLQSL--ALLEYKYSTANLARKLFRRASEI-DPR-HQPVWIAWGWMEW 261
+ + P D SL A LE + AR ++ A+EI DP+ H W W E
Sbjct: 657 ERAISELPEDKSRAMSLRYAQLETTVGEIDRARAIYAHAAEISDPKVHVKFWDTWKNFEV 716
Query: 262 KEGNLDTARELYERALSIDST 282
GN T R++ S++++
Sbjct: 717 AHGNEATVRDMLRVRRSVEAS 737
>UNIPROTKB|P91175 [details] [associations]
symbol:C50F2.3 "Protein C50F2.3" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003107 InterPro:IPR011990
InterPro:IPR019734 Pfam:PF13181 SMART:SM00386 GO:GO:0009792
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0000003
GO:GO:0005622 GO:GO:0006396 GO:GO:0000910 Gene3D:1.25.40.10
InterPro:IPR013105 Pfam:PF07719 GO:GO:0001703 eggNOG:NOG289100
KO:K12867 OMA:PRSYKLW HOGENOM:HOG000176133
GeneTree:ENSGT00550000075140 EMBL:FO080915 PIR:T29775
RefSeq:NP_491250.1 ProteinModelPortal:P91175 SMR:P91175
IntAct:P91175 STRING:P91175 PaxDb:P91175 EnsemblMetazoa:C50F2.3.1
EnsemblMetazoa:C50F2.3.2 GeneID:171970 KEGG:cel:CELE_C50F2.3
UCSC:C50F2.3 CTD:171970 WormBase:C50F2.3 InParanoid:P91175
NextBio:873471 Uniprot:P91175
Length = 855
Score = 128 (50.1 bits), Expect = 0.00012, P = 0.00012
Identities = 63/261 (24%), Positives = 111/261 (42%)
Query: 39 QATQGENPYIWQCWAVLENKLGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKK 98
QA +P +W +A E G + R+++D +A+ +
Sbjct: 481 QARVHRSPILWAMYADYEECCGTVESCRKVYDKMIELRVASPQMIMNYAMFLEENEYFEL 540
Query: 99 ARQLLAKGL---KFCG----GNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASW 151
A Q KG+ K+ G N Y+ + + K + E+AR+LF Q + P + A +
Sbjct: 541 AFQAYEKGIALFKWPGVFDIWNTYLVKFIKRYGGK--KLERARDLFEQCLENCPPTHAKY 598
Query: 152 IAWSQMEMQQENNLA--ARQLFERAVQASPKNRFAWH-VWGIF---EANMGFIDKGKKLL 205
I ++++E+ LA A ++ RA S +R H ++ I+ M I + + +
Sbjct: 599 IFLLYAKLEEEHGLARHALSIYNRA--CSGVDRADMHSMYNIYIKKVQEMYGIAQCRPIF 656
Query: 206 KIGHAVNPRDPVLLQSL--ALLEYKYSTANLARKLFRRASEI-DPR-HQPVWIAWGWMEW 261
+ + P D SL A LE + AR ++ A+EI DP+ H W W E
Sbjct: 657 ERAISELPEDKSRAMSLRYAQLETTVGEIDRARAIYAHAAEISDPKVHVKFWDTWKNFEV 716
Query: 262 KEGNLDTARELYERALSIDST 282
GN T R++ S++++
Sbjct: 717 AHGNEATVRDMLRVRRSVEAS 737
>FB|FBgn0033859 [details] [associations]
symbol:CG6197 species:7227 "Drosophila melanogaster"
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=IMP] [GO:0005634 "nucleus" evidence=IC]
[GO:0006911 "phagocytosis, engulfment" evidence=IMP] [GO:0071011
"precatalytic spliceosome" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC] [GO:0071013 "catalytic step
2 spliceosome" evidence=IDA] InterPro:IPR003107 InterPro:IPR011990
SMART:SM00386 EMBL:AE013599 GO:GO:0006911 Gene3D:1.25.40.10
GO:GO:0071011 GO:GO:0000398 GO:GO:0071013 GO:GO:0000381
eggNOG:NOG289100 KO:K12867 OMA:PRSYKLW GeneTree:ENSGT00550000075140
EMBL:BT133178 RefSeq:NP_610891.1 UniGene:Dm.606 SMR:A1Z9G2
IntAct:A1Z9G2 STRING:A1Z9G2 EnsemblMetazoa:FBtr0087623 GeneID:36514
KEGG:dme:Dmel_CG6197 UCSC:CG6197-RA FlyBase:FBgn0033859
InParanoid:A1Z9G2 OrthoDB:EOG42FQZD GenomeRNAi:36514 NextBio:798953
Uniprot:A1Z9G2
Length = 883
Score = 128 (50.1 bits), Expect = 0.00013, P = 0.00013
Identities = 63/296 (21%), Positives = 125/296 (42%)
Query: 19 KVLSKQSKVAEARAIYAKGSQATQGE---NPYIWQCWAVLENKLGNIGKARELFDASTVA 75
K++ + + + + + Y ++ Q + +W +A LE G + +++ +
Sbjct: 453 KLMQRATAMPKRKIAYYDDTETVQARLHRSLKVWSMYADLEESFGTFKTCKAVYER--II 510
Query: 76 D----KGHIAAWHGWAVLELRQGNIKKARQLLAKGLK-FCGGNEY----IYQTLALLEAK 126
D I +G + E ++A + KG+ F N Y Y T L
Sbjct: 511 DLKICTPQIIINYGMFLEE--HNYFEEAYRAYEKGISLFKWPNVYDIWNSYLTKFLERYG 568
Query: 127 ANRYEQARNLFRQAT-KCNPKSCASWIAWSQMEMQQENNLA--ARQLFERAVQASPKNRF 183
+ E+AR+LF Q +C P+ A + ++++E+ LA A +++RA A ++
Sbjct: 569 GTKLERARDLFEQCLDQCPPEH-AKYFYLLYAKLEEEHGLARHAMSVYDRATSAVKEDEM 627
Query: 184 AWHVWGIF---EANMGFIDKGKKLLKIGHAVNPRDPV--LLQSLALLEYKYSTANLARKL 238
+ ++ IF A + + + +++ + P + + A LE K + AR +
Sbjct: 628 -FDMYNIFIKKAAEIYGLPRTREIYEKAIESLPEQNMRHMCVKFAELETKLGEVDRARAI 686
Query: 239 FRRASEI-DPR-HQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQA 292
+ S++ DPR W W E + GN DT RE+ S+ +T + + A
Sbjct: 687 YAHCSQVCDPRITADFWQTWKEFEVRHGNEDTMREMLRIKRSVQATYNTQVNMMAA 742
>UNIPROTKB|A5D7G1 [details] [associations]
symbol:OGT "OGT protein" species:9913 "Bos taurus"
[GO:0071300 "cellular response to retinoic acid" evidence=IEA]
[GO:0070688 "MLL5-L complex" evidence=IEA] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=IEA] [GO:0048015
"phosphatidylinositol-mediated signaling" evidence=IEA] [GO:0046972
"histone acetyltransferase activity (H4-K16 specific)"
evidence=IEA] [GO:0046626 "regulation of insulin receptor signaling
pathway" evidence=IEA] [GO:0045862 "positive regulation of
proteolysis" evidence=IEA] [GO:0043996 "histone acetyltransferase
activity (H4-K8 specific)" evidence=IEA] [GO:0043995 "histone
acetyltransferase activity (H4-K5 specific)" evidence=IEA]
[GO:0035020 "regulation of Rac protein signal transduction"
evidence=IEA] [GO:0032868 "response to insulin stimulus"
evidence=IEA] [GO:0030854 "positive regulation of granulocyte
differentiation" evidence=IEA] [GO:0008047 "enzyme activator
activity" evidence=IEA] [GO:0006917 "induction of apoptosis"
evidence=IEA] [GO:0006110 "regulation of glycolysis" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005547
"phosphatidylinositol-3,4,5-trisphosphate binding" evidence=IEA]
[GO:0000123 "histone acetyltransferase complex" evidence=IEA]
InterPro:IPR001440 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF00515 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 GO:GO:0005886 GO:GO:0005813 GO:GO:0006917
GO:GO:0071300 GO:GO:0032868 Gene3D:1.25.40.10 GO:GO:0070688
GO:GO:0005547 GO:GO:0035020 GO:GO:0048015 GO:GO:0045862
GO:GO:0008047 GO:GO:0051571 GO:GO:0000123 GO:GO:0030854
GO:GO:0046626 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996 CAZy:GT41
eggNOG:COG3914 GeneTree:ENSGT00550000074327 HOGENOM:HOG000003765
KO:K09667 OMA:LAYMPNT CTD:8473 HOVERGEN:HBG000351 OrthoDB:EOG4HQDHJ
EMBL:DAAA02072838 EMBL:DAAA02072839 EMBL:DAAA02072840 EMBL:BC140542
IPI:IPI00840256 RefSeq:NP_001091539.1 UniGene:Bt.102182 SMR:A5D7G1
STRING:A5D7G1 Ensembl:ENSBTAT00000045447 GeneID:532053
KEGG:bta:532053 NextBio:20875591 Uniprot:A5D7G1
Length = 1036
Score = 128 (50.1 bits), Expect = 0.00016, P = 0.00016
Identities = 65/299 (21%), Positives = 120/299 (40%)
Query: 44 ENPYIWQCWAVLEN---KLGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKAR 100
+NP + + ++ L N + G + +A E + + I + A + G+++ A
Sbjct: 74 QNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAV 133
Query: 101 QLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQM--- 157
Q L++ + L L R E+A+ + +A + P +AWS +
Sbjct: 134 QAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFA---VAWSNLGCV 190
Query: 158 -EMQQENNLAARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDP 216
Q E LA FE+AV P A+ G D+ +++P
Sbjct: 191 FNAQGEIWLAIHH-FEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHA 249
Query: 217 VLLQSLALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERA 276
V+ +LA + Y+ +LA +RRA E+ P + ++G++ A + Y A
Sbjct: 250 VVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTA 309
Query: 277 LSIDSTTESAARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQG 335
L + T A L +++ GN+ A RL+R +L + + A + + QG
Sbjct: 310 LRLCPTH---ADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQG 365
>RGD|62060 [details] [associations]
symbol:Ogt "O-linked N-acetylglucosamine (GlcNAc) transferase"
species:10116 "Rattus norvegicus" [GO:0000123 "histone
acetyltransferase complex" evidence=IEA;ISO;ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005547
"phosphatidylinositol-3,4,5-trisphosphate binding"
evidence=IEA;ISO;ISS] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=ISO;IDA] [GO:0005886 "plasma membrane"
evidence=IEA;ISO;ISS] [GO:0006110 "regulation of glycolysis"
evidence=IEA;ISO;ISS] [GO:0006493 "protein O-linked glycosylation"
evidence=ISO;IDA] [GO:0006917 "induction of apoptosis"
evidence=IEA;ISO;ISS] [GO:0008047 "enzyme activator activity"
evidence=IEA;ISO] [GO:0016262 "protein
N-acetylglucosaminyltransferase activity" evidence=ISO;IDA]
[GO:0030854 "positive regulation of granulocyte differentiation"
evidence=IEA;ISO] [GO:0032868 "response to insulin stimulus"
evidence=IEA;ISO] [GO:0035020 "regulation of Rac protein signal
transduction" evidence=IEA;ISO] [GO:0042277 "peptide binding"
evidence=IDA] [GO:0043085 "positive regulation of catalytic
activity" evidence=ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA;ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=IEA;ISO;ISS]
[GO:0045862 "positive regulation of proteolysis"
evidence=IEA;ISO;ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0046626 "regulation of insulin receptor signaling pathway"
evidence=IEA;ISO] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=IEA;ISO;ISS] [GO:0048015
"phosphatidylinositol-mediated signaling" evidence=IEA;ISO;ISS]
[GO:0048029 "monosaccharide binding" evidence=IDA] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=IEA;ISO]
[GO:0070207 "protein homotrimerization" evidence=IDA] [GO:0070688
"MLL5-L complex" evidence=IEA;ISO] [GO:0071300 "cellular response to
retinoic acid" evidence=IEA;ISO] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001440 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF00515 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 UniPathway:UPA00378 RGD:62060 GO:GO:0005829
GO:GO:0005886 GO:GO:0005813 GO:GO:0006917 GO:GO:0006110
GO:GO:0048029 GO:GO:0071300 GO:GO:0006493 GO:GO:0032868
GO:GO:0042277 Gene3D:1.25.40.10 GO:GO:0070688 GO:GO:0005547
GO:GO:0035020 GO:GO:0048015 GO:GO:0070207 GO:GO:0045862
GO:GO:0008047 GO:GO:0016262 GO:GO:0051571 GO:GO:0000123
GO:GO:0030854 GO:GO:0043981 GO:GO:0043982 GO:GO:0046626
GO:GO:0043984 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996 CAZy:GT41
eggNOG:COG3914 HOGENOM:HOG000003765 KO:K09667 CTD:8473
HOVERGEN:HBG000351 OrthoDB:EOG4HQDHJ EMBL:U76557 IPI:IPI00231503
PIR:T31673 RefSeq:NP_058803.2 UniGene:Rn.82705
ProteinModelPortal:P56558 SMR:P56558 STRING:P56558
PhosphoSite:P56558 PRIDE:P56558 GeneID:26295 KEGG:rno:26295
UCSC:RGD:62060 InParanoid:P56558 BRENDA:2.4.1.94 NextBio:608004
Genevestigator:P56558 GermOnline:ENSRNOG00000003359 Uniprot:P56558
Length = 1036
Score = 128 (50.1 bits), Expect = 0.00016, P = 0.00016
Identities = 65/299 (21%), Positives = 120/299 (40%)
Query: 44 ENPYIWQCWAVLEN---KLGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKAR 100
+NP + + ++ L N + G + +A E + + I + A + G+++ A
Sbjct: 74 QNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAV 133
Query: 101 QLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQM--- 157
Q L++ + L L R E+A+ + +A + P +AWS +
Sbjct: 134 QAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFA---VAWSNLGCV 190
Query: 158 -EMQQENNLAARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDP 216
Q E LA FE+AV P A+ G D+ +++P
Sbjct: 191 FNAQGEIWLAIHH-FEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHA 249
Query: 217 VLLQSLALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERA 276
V+ +LA + Y+ +LA +RRA E+ P + ++G++ A + Y A
Sbjct: 250 VVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTA 309
Query: 277 LSIDSTTESAARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQG 335
L + T A L +++ GN+ A RL+R +L + + A + + QG
Sbjct: 310 LRLCPTH---ADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQG 365
>UNIPROTKB|E2QSQ5 [details] [associations]
symbol:OGT "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071300 "cellular response to retinoic acid"
evidence=IEA] [GO:0070688 "MLL5-L complex" evidence=IEA]
[GO:0051571 "positive regulation of histone H3-K4 methylation"
evidence=IEA] [GO:0048015 "phosphatidylinositol-mediated signaling"
evidence=IEA] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=IEA] [GO:0046626 "regulation of insulin
receptor signaling pathway" evidence=IEA] [GO:0045862 "positive
regulation of proteolysis" evidence=IEA] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=IEA]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=IEA] [GO:0035020 "regulation of Rac protein signal
transduction" evidence=IEA] [GO:0032868 "response to insulin
stimulus" evidence=IEA] [GO:0030854 "positive regulation of
granulocyte differentiation" evidence=IEA] [GO:0008047 "enzyme
activator activity" evidence=IEA] [GO:0006917 "induction of
apoptosis" evidence=IEA] [GO:0006110 "regulation of glycolysis"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005547
"phosphatidylinositol-3,4,5-trisphosphate binding" evidence=IEA]
[GO:0000123 "histone acetyltransferase complex" evidence=IEA]
InterPro:IPR001440 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF00515 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 GO:GO:0005886 GO:GO:0005813 GO:GO:0006917
GO:GO:0071300 GO:GO:0032868 Gene3D:1.25.40.10 GO:GO:0070688
GO:GO:0005547 GO:GO:0035020 GO:GO:0048015 GO:GO:0045862
GO:GO:0008047 GO:GO:0051571 GO:GO:0000123 GO:GO:0030854
GO:GO:0046626 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00550000074327 KO:K09667 OMA:LAYMPNT CTD:8473
EMBL:AAEX03026488 RefSeq:XP_849392.1 Ensembl:ENSCAFT00000027149
GeneID:480955 KEGG:cfa:480955 NextBio:20855858 Uniprot:E2QSQ5
Length = 1046
Score = 128 (50.1 bits), Expect = 0.00016, P = 0.00016
Identities = 65/299 (21%), Positives = 120/299 (40%)
Query: 44 ENPYIWQCWAVLEN---KLGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKAR 100
+NP + + ++ L N + G + +A E + + I + A + G+++ A
Sbjct: 84 QNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAV 143
Query: 101 QLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQM--- 157
Q L++ + L L R E+A+ + +A + P +AWS +
Sbjct: 144 QAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFA---VAWSNLGCV 200
Query: 158 -EMQQENNLAARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDP 216
Q E LA FE+AV P A+ G D+ +++P
Sbjct: 201 FNAQGEIWLAIHH-FEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHA 259
Query: 217 VLLQSLALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERA 276
V+ +LA + Y+ +LA +RRA E+ P + ++G++ A + Y A
Sbjct: 260 VVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTA 319
Query: 277 LSIDSTTESAARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQG 335
L + T A L +++ GN+ A RL+R +L + + A + + QG
Sbjct: 320 LRLCPTH---ADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQG 375
>UNIPROTKB|O15294 [details] [associations]
symbol:OGT "UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit" species:9606 "Homo
sapiens" [GO:0006915 "apoptotic process" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0016262 "protein
N-acetylglucosaminyltransferase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0045862 "positive
regulation of proteolysis" evidence=IDA] [GO:0006493 "protein
O-linked glycosylation" evidence=IMP;IDA] [GO:0070688 "MLL5-L
complex" evidence=IDA] [GO:0043984 "histone H4-K16 acetylation"
evidence=IDA] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=IDA] [GO:0000123 "histone
acetyltransferase complex" evidence=IDA] [GO:0043981 "histone H4-K5
acetylation" evidence=IDA] [GO:0043995 "histone acetyltransferase
activity (H4-K5 specific)" evidence=IDA] [GO:0043982 "histone H4-K8
acetylation" evidence=IDA] [GO:0043996 "histone acetyltransferase
activity (H4-K8 specific)" evidence=IDA] [GO:0048015
"phosphatidylinositol-mediated signaling" evidence=IDA] [GO:0005547
"phosphatidylinositol-3,4,5-trisphosphate binding" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0035020 "regulation
of Rac protein signal transduction" evidence=IDA] [GO:0032868
"response to insulin stimulus" evidence=IDA] [GO:0046626
"regulation of insulin receptor signaling pathway" evidence=IDA]
[GO:0006917 "induction of apoptosis" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP;IDA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IMP] [GO:0006110 "regulation of
glycolysis" evidence=IDA] [GO:0007165 "signal transduction"
evidence=TAS] [GO:0007584 "response to nutrient" evidence=TAS]
[GO:0008375 "acetylglucosaminyltransferase activity" evidence=TAS]
[GO:0051571 "positive regulation of histone H3-K4 methylation"
evidence=IDA] [GO:0008047 "enzyme activator activity" evidence=IDA]
[GO:0030854 "positive regulation of granulocyte differentiation"
evidence=IMP] [GO:0071300 "cellular response to retinoic acid"
evidence=IMP] [GO:0043085 "positive regulation of catalytic
activity" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005813 "centrosome" evidence=IDA] InterPro:IPR001440
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF00515 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
UniPathway:UPA00378 PDB:3TAX GO:GO:0005829 GO:GO:0005739
GO:GO:0005886 GO:GO:0005813 GO:GO:0006915 GO:GO:0006917
GO:GO:0006110 GO:GO:0048029 GO:GO:0071300 GO:GO:0007584
GO:GO:0006493 GO:GO:0032868 GO:GO:0042277 Gene3D:1.25.40.10
GO:GO:0070688 GO:GO:0005547 GO:GO:0035020 GO:GO:0048015
GO:GO:0070207 GO:GO:0045862 GO:GO:0008047 GO:GO:0016262
GO:GO:0051571 GO:GO:0000123 GO:GO:0030854 PDB:3PE4 PDB:4GYW
PDB:4GYY PDB:4GZ3 PDBsum:3PE4 PDBsum:3TAX PDBsum:4GYW PDBsum:4GYY
PDBsum:4GZ3 GO:GO:0043981 GO:GO:0043982 GO:GO:0046626 GO:GO:0043984
CAZy:GT41 eggNOG:COG3914 HOGENOM:HOG000003765 KO:K09667 OMA:LAYMPNT
EMBL:U77413 EMBL:AJ315767 EMBL:AL050366 EMBL:AL833085 EMBL:BX537844
EMBL:BC014434 EMBL:BC038180 IPI:IPI00005780 IPI:IPI00219856
IPI:IPI00607723 IPI:IPI01008950 RefSeq:NP_858058.1
RefSeq:NP_858059.1 UniGene:Hs.405410 PDB:1W3B PDB:3PE3 PDB:4AY5
PDB:4AY6 PDB:4GZ5 PDB:4GZ6 PDBsum:1W3B PDBsum:3PE3 PDBsum:4AY5
PDBsum:4AY6 PDBsum:4GZ5 PDBsum:4GZ6 ProteinModelPortal:O15294
SMR:O15294 DIP:DIP-33491N IntAct:O15294 MINT:MINT-2998811
STRING:O15294 PhosphoSite:O15294 PaxDb:O15294 PRIDE:O15294
DNASU:8473 Ensembl:ENST00000373701 Ensembl:ENST00000373719
GeneID:8473 KEGG:hsa:8473 UCSC:uc004eaa.2 UCSC:uc004eab.2 CTD:8473
GeneCards:GC0XP070752 HGNC:HGNC:8127 HPA:CAB034099 HPA:HPA030751
HPA:HPA030752 MIM:300255 neXtProt:NX_O15294 PharmGKB:PA31914
HOVERGEN:HBG000351 InParanoid:O15294 OrthoDB:EOG4HQDHJ
PhylomeDB:O15294 BioCyc:MetaCyc:ENSG00000147162-MONOMER
SABIO-RK:O15294 BindingDB:O15294 ChEMBL:CHEMBL5955
EvolutionaryTrace:O15294 GenomeRNAi:8473 NextBio:31706
ArrayExpress:O15294 Bgee:O15294 CleanEx:HS_OGT
Genevestigator:O15294 GermOnline:ENSG00000147162 Uniprot:O15294
Length = 1046
Score = 128 (50.1 bits), Expect = 0.00016, P = 0.00016
Identities = 65/299 (21%), Positives = 120/299 (40%)
Query: 44 ENPYIWQCWAVLEN---KLGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKAR 100
+NP + + ++ L N + G + +A E + + I + A + G+++ A
Sbjct: 84 QNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAV 143
Query: 101 QLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQM--- 157
Q L++ + L L R E+A+ + +A + P +AWS +
Sbjct: 144 QAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFA---VAWSNLGCV 200
Query: 158 -EMQQENNLAARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDP 216
Q E LA FE+AV P A+ G D+ +++P
Sbjct: 201 FNAQGEIWLAIHH-FEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHA 259
Query: 217 VLLQSLALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERA 276
V+ +LA + Y+ +LA +RRA E+ P + ++G++ A + Y A
Sbjct: 260 VVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTA 319
Query: 277 LSIDSTTESAARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQG 335
L + T A L +++ GN+ A RL+R +L + + A + + QG
Sbjct: 320 LRLCPTH---ADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQG 375
>UNIPROTKB|F1RSV2 [details] [associations]
symbol:OGT "UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit" species:9823 "Sus
scrofa" [GO:0071300 "cellular response to retinoic acid"
evidence=IEA] [GO:0070688 "MLL5-L complex" evidence=IEA]
[GO:0051571 "positive regulation of histone H3-K4 methylation"
evidence=IEA] [GO:0048015 "phosphatidylinositol-mediated signaling"
evidence=IEA] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=IEA] [GO:0046626 "regulation of insulin
receptor signaling pathway" evidence=IEA] [GO:0045862 "positive
regulation of proteolysis" evidence=IEA] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=IEA]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=IEA] [GO:0035020 "regulation of Rac protein signal
transduction" evidence=IEA] [GO:0032868 "response to insulin
stimulus" evidence=IEA] [GO:0030854 "positive regulation of
granulocyte differentiation" evidence=IEA] [GO:0008047 "enzyme
activator activity" evidence=IEA] [GO:0006917 "induction of
apoptosis" evidence=IEA] [GO:0006110 "regulation of glycolysis"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005547
"phosphatidylinositol-3,4,5-trisphosphate binding" evidence=IEA]
[GO:0000123 "histone acetyltransferase complex" evidence=IEA]
InterPro:IPR001440 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF00515 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 GO:GO:0005886 GO:GO:0005813 GO:GO:0006917
GO:GO:0071300 GO:GO:0032868 Gene3D:1.25.40.10 GO:GO:0070688
GO:GO:0005547 GO:GO:0035020 GO:GO:0048015 GO:GO:0045862
GO:GO:0008047 GO:GO:0051571 GO:GO:0000123 GO:GO:0030854
GO:GO:0046626 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00550000074327 OMA:LAYMPNT EMBL:FP015848
Ensembl:ENSSSCT00000013561 Ensembl:ENSSSCT00000032783
Uniprot:F1RSV2
Length = 1046
Score = 128 (50.1 bits), Expect = 0.00016, P = 0.00016
Identities = 65/299 (21%), Positives = 120/299 (40%)
Query: 44 ENPYIWQCWAVLEN---KLGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKAR 100
+NP + + ++ L N + G + +A E + + I + A + G+++ A
Sbjct: 84 QNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAV 143
Query: 101 QLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQM--- 157
Q L++ + L L R E+A+ + +A + P +AWS +
Sbjct: 144 QAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFA---VAWSNLGCV 200
Query: 158 -EMQQENNLAARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDP 216
Q E LA FE+AV P A+ G D+ +++P
Sbjct: 201 FNAQGEIWLAIHH-FEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHA 259
Query: 217 VLLQSLALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERA 276
V+ +LA + Y+ +LA +RRA E+ P + ++G++ A + Y A
Sbjct: 260 VVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTA 319
Query: 277 LSIDSTTESAARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQG 335
L + T A L +++ GN+ A RL+R +L + + A + + QG
Sbjct: 320 LRLCPTH---ADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQG 375
>UNIPROTKB|Q27HV0 [details] [associations]
symbol:OGT "UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit" species:9823 "Sus
scrofa" [GO:0006110 "regulation of glycolysis" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0016262 "protein N-acetylglucosaminyltransferase
activity" evidence=ISS] [GO:0000123 "histone acetyltransferase
complex" evidence=ISS] [GO:0046972 "histone acetyltransferase
activity (H4-K16 specific)" evidence=ISS] [GO:0043995 "histone
acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043984 "histone H4-K16 acetylation" evidence=ISS] [GO:0043982
"histone H4-K8 acetylation" evidence=ISS] [GO:0043981 "histone
H4-K5 acetylation" evidence=ISS] [GO:0006917 "induction of
apoptosis" evidence=ISS] [GO:0005886 "plasma membrane"
evidence=ISS] [GO:0005547 "phosphatidylinositol-3,4,5-trisphosphate
binding" evidence=ISS] [GO:0048015 "phosphatidylinositol-mediated
signaling" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0045862 "positive
regulation of proteolysis" evidence=ISS] [GO:0006493 "protein
O-linked glycosylation" evidence=ISS] InterPro:IPR001440
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF00515 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
UniPathway:UPA00378 GO:GO:0005829 GO:GO:0005886 GO:GO:0006917
GO:GO:0006110 GO:GO:0006493 Gene3D:1.25.40.10 GO:GO:0005547
GO:GO:0048015 GO:GO:0045862 HSSP:P07213 GO:GO:0016262 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 CAZy:GT41 eggNOG:COG3914
HOGENOM:HOG000003765 KO:K09667 CTD:8473 HOVERGEN:HBG000351
OrthoDB:EOG4HQDHJ EMBL:DQ400859 RefSeq:NP_001034837.1
UniGene:Ssc.27417 ProteinModelPortal:Q27HV0 SMR:Q27HV0
STRING:Q27HV0 GeneID:664652 KEGG:ssc:664652 Uniprot:Q27HV0
Length = 1046
Score = 128 (50.1 bits), Expect = 0.00016, P = 0.00016
Identities = 65/299 (21%), Positives = 120/299 (40%)
Query: 44 ENPYIWQCWAVLEN---KLGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKAR 100
+NP + + ++ L N + G + +A E + + I + A + G+++ A
Sbjct: 84 QNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAV 143
Query: 101 QLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQM--- 157
Q L++ + L L R E+A+ + +A + P +AWS +
Sbjct: 144 QAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFA---VAWSNLGCV 200
Query: 158 -EMQQENNLAARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDP 216
Q E LA FE+AV P A+ G D+ +++P
Sbjct: 201 FNAQGEIWLAIHH-FEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHA 259
Query: 217 VLLQSLALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERA 276
V+ +LA + Y+ +LA +RRA E+ P + ++G++ A + Y A
Sbjct: 260 VVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTA 319
Query: 277 LSIDSTTESAARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQG 335
L + T A L +++ GN+ A RL+R +L + + A + + QG
Sbjct: 320 LRLCPTH---ADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQG 375
>UNIPROTKB|P81436 [details] [associations]
symbol:OGT "UDP-N-acetylglucosamine--peptide
N-acetylglucosaminyltransferase 110 kDa subunit" species:9986
"Oryctolagus cuniculus" [GO:0000123 "histone acetyltransferase
complex" evidence=ISS] [GO:0005547
"phosphatidylinositol-3,4,5-trisphosphate binding" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=ISS] [GO:0006110 "regulation
of glycolysis" evidence=ISS] [GO:0006493 "protein O-linked
glycosylation" evidence=ISS] [GO:0006917 "induction of apoptosis"
evidence=ISS] [GO:0016262 "protein N-acetylglucosaminyltransferase
activity" evidence=ISS] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043984 "histone H4-K16 acetylation" evidence=ISS] [GO:0048015
"phosphatidylinositol-mediated signaling" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR001440
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF00515 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
UniPathway:UPA00378 GO:GO:0005886 GO:GO:0005737 GO:GO:0005813
GO:GO:0006917 GO:GO:0006110 GO:GO:0071300 GO:GO:0006493
GO:GO:0032868 Gene3D:1.25.40.10 GO:GO:0070688 GO:GO:0005547
GO:GO:0035020 GO:GO:0048015 GO:GO:0045862 GO:GO:0008047
GO:GO:0016262 GO:GO:0051571 GO:GO:0000123 GO:GO:0030854
GO:GO:0043981 GO:GO:0043982 GO:GO:0046626 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996 eggNOG:COG3914
GeneTree:ENSGT00550000074327 OMA:LAYMPNT CTD:8473
RefSeq:XP_002720149.1 ProteinModelPortal:P81436 STRING:P81436
Ensembl:ENSOCUT00000016973 GeneID:100354727 Uniprot:P81436
Length = 1046
Score = 128 (50.1 bits), Expect = 0.00016, P = 0.00016
Identities = 65/299 (21%), Positives = 120/299 (40%)
Query: 44 ENPYIWQCWAVLEN---KLGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKAR 100
+NP + + ++ L N + G + +A E + + I + A + G+++ A
Sbjct: 84 QNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAV 143
Query: 101 QLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQM--- 157
Q L++ + L L R E+A+ + +A + P +AWS +
Sbjct: 144 QAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFA---VAWSNLGCV 200
Query: 158 -EMQQENNLAARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDP 216
Q E LA FE+AV P A+ G D+ +++P
Sbjct: 201 FNAQGEIWLAIHH-FEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHA 259
Query: 217 VLLQSLALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERA 276
V+ +LA + Y+ +LA +RRA E+ P + ++G++ A + Y A
Sbjct: 260 VVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTA 319
Query: 277 LSIDSTTESAARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQG 335
L + T A L +++ GN+ A RL+R +L + + A + + QG
Sbjct: 320 LRLCPTH---ADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQG 375
>MGI|MGI:1339639 [details] [associations]
symbol:Ogt "O-linked N-acetylglucosamine (GlcNAc)
transferase
(UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl
transferase)" species:10090 "Mus musculus" [GO:0000123 "histone
acetyltransferase complex" evidence=ISO] [GO:0003824 "catalytic
activity" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005547 "phosphatidylinositol-3,4,5-trisphosphate binding"
evidence=ISO] [GO:0005622 "intracellular" evidence=TAS] [GO:0005634
"nucleus" evidence=ISO;TAS] [GO:0005737 "cytoplasm" evidence=TAS]
[GO:0005829 "cytosol" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0006110 "regulation of glycolysis" evidence=ISO]
[GO:0006493 "protein O-linked glycosylation"
evidence=ISO;ISS;IDA;TAS] [GO:0006917 "induction of apoptosis"
evidence=ISO] [GO:0008047 "enzyme activator activity" evidence=ISO]
[GO:0008080 "N-acetyltransferase activity" evidence=TAS]
[GO:0008289 "lipid binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016262 "protein N-acetylglucosaminyltransferase
activity" evidence=ISO] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0016757 "transferase activity, transferring glycosyl groups"
evidence=IEA] [GO:0030854 "positive regulation of granulocyte
differentiation" evidence=ISO] [GO:0032868 "response to insulin
stimulus" evidence=ISO] [GO:0035020 "regulation of Rac protein
signal transduction" evidence=ISO] [GO:0042277 "peptide binding"
evidence=ISO] [GO:0043085 "positive regulation of catalytic
activity" evidence=ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO] [GO:0043982 "histone H4-K8 acetylation" evidence=ISO]
[GO:0043984 "histone H4-K16 acetylation" evidence=ISO] [GO:0045862
"positive regulation of proteolysis" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0046626 "regulation of insulin receptor
signaling pathway" evidence=ISO] [GO:0048015
"phosphatidylinositol-mediated signaling" evidence=ISO] [GO:0048029
"monosaccharide binding" evidence=ISO] [GO:0051571 "positive
regulation of histone H3-K4 methylation" evidence=ISO] [GO:0070207
"protein homotrimerization" evidence=ISO] [GO:0070688 "MLL5-L
complex" evidence=ISO] [GO:0071300 "cellular response to retinoic
acid" evidence=ISO] [GO:0080182 "histone H3-K4 trimethylation"
evidence=ISO] InterPro:IPR001440 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 PROSITE:PS50005
PROSITE:PS50293 SMART:SM00028 UniPathway:UPA00378 MGI:MGI:1339639
GO:GO:0005829 GO:GO:0005886 GO:GO:0005813 GO:GO:0006917
GO:GO:0006110 GO:GO:0048029 GO:GO:0071300 GO:GO:0006493
GO:GO:0032868 GO:GO:0042277 Gene3D:1.25.40.10 GO:GO:0070688
GO:GO:0005547 GO:GO:0035020 GO:GO:0048015 GO:GO:0070207
GO:GO:0045862 GO:GO:0008047 GO:GO:0008080 GO:GO:0016262
GO:GO:0051571 GO:GO:0000123 GO:GO:0030854 GO:GO:0043981
GO:GO:0043982 GO:GO:0046626 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:O15294 CAZy:GT41 eggNOG:COG3914
GeneTree:ENSGT00550000074327 HOGENOM:HOG000003765 KO:K09667
CTD:8473 HOVERGEN:HBG000351 OrthoDB:EOG4HQDHJ EMBL:AF539527
EMBL:AF363030 EMBL:AL806534 EMBL:AL805980 EMBL:BC057319
EMBL:AK047095 IPI:IPI00420870 IPI:IPI00845528 RefSeq:NP_631883.2
UniGene:Mm.259191 ProteinModelPortal:Q8CGY8 SMR:Q8CGY8
IntAct:Q8CGY8 STRING:Q8CGY8 PaxDb:Q8CGY8 PRIDE:Q8CGY8
Ensembl:ENSMUST00000044475 Ensembl:ENSMUST00000119299 GeneID:108155
KEGG:mmu:108155 UCSC:uc009tyc.2 UCSC:uc009tyd.2 InParanoid:Q8CGY8
ChiTaRS:OGT NextBio:360182 Bgee:Q8CGY8 Genevestigator:Q8CGY8
Uniprot:Q8CGY8
Length = 1046
Score = 128 (50.1 bits), Expect = 0.00016, P = 0.00016
Identities = 65/299 (21%), Positives = 120/299 (40%)
Query: 44 ENPYIWQCWAVLEN---KLGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKAR 100
+NP + + ++ L N + G + +A E + + I + A + G+++ A
Sbjct: 84 QNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAV 143
Query: 101 QLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQM--- 157
Q L++ + L L R E+A+ + +A + P +AWS +
Sbjct: 144 QAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFA---VAWSNLGCV 200
Query: 158 -EMQQENNLAARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDP 216
Q E LA FE+AV P A+ G D+ +++P
Sbjct: 201 FNAQGEIWLAIHH-FEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHA 259
Query: 217 VLLQSLALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERA 276
V+ +LA + Y+ +LA +RRA E+ P + ++G++ A + Y A
Sbjct: 260 VVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTA 319
Query: 277 LSIDSTTESAARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQG 335
L + T A L +++ GN+ A RL+R +L + + A + + QG
Sbjct: 320 LRLCPTH---ADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQG 375
>POMBASE|SPCC1183.07 [details] [associations]
symbol:SPCC1183.07 "U3 snoRNP-associated protein Rrp5
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IDA] [GO:0006364 "rRNA processing"
evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=ISO] [GO:0042134
"rRNA primary transcript binding" evidence=ISO] InterPro:IPR003029
InterPro:IPR003107 InterPro:IPR008847 InterPro:IPR011990
Pfam:PF00575 Pfam:PF05843 PROSITE:PS50126 SMART:SM00386
PomBase:SPCC1183.07 GO:GO:0005730 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0030515 GO:GO:0006397
Gene3D:1.25.40.10 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0006364 GO:GO:0042134 GO:GO:0032040
InterPro:IPR022967 SMART:SM00316 HSSP:P05055 eggNOG:COG0539
KO:K14792 OMA:LHLADIY PIR:T40847 RefSeq:NP_587890.1
ProteinModelPortal:O74835 STRING:O74835 EnsemblFungi:SPCC1183.07.1
GeneID:2538897 KEGG:spo:SPCC1183.07 HOGENOM:HOG000167551
OrthoDB:EOG4N07P1 NextBio:20800076 Uniprot:O74835
Length = 1690
Score = 130 (50.8 bits), Expect = 0.00017, P = 0.00017
Identities = 55/279 (19%), Positives = 111/279 (39%)
Query: 56 ENKLGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEY 115
E L I F+ ++ W + L +++AR++ + L E
Sbjct: 1416 EKDLDEIPSTAADFERQLLSSPNSSLLWISYMAYHLNLNELQEAREVGKRALSTINYREE 1475
Query: 116 -----IYQTLALLEAKANRYEQARNLFRQATK-CNP-----KSCASWIAWSQMEMQQENN 164
++ L LE + + +F++A C+ K C I ++++ E
Sbjct: 1476 DEKLNVWMALLNLEVAYGTEDSLKEVFKEACAYCDALIVYEKLCGILIKGGKVDLADEY- 1534
Query: 165 LAARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPR-DPV-LLQSL 222
QL + + P W + F N +K LL+ P+ + V +++
Sbjct: 1535 ---MQLMLKNFKQVPS---VWIQYATFLLNNDKAEKAHGLLERSLQSLPKSEHVGIIEKF 1588
Query: 223 ALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDST 282
A+LE+K R +F P+ +W ME K+ + R L++R L+++ +
Sbjct: 1589 AILEFKNGDPERGRTIFEGLLSSYPKRLDLWNVLIDMEMKQDDPSIVRRLFQRLLALNLS 1648
Query: 283 TESAARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSY 321
T+ A + W E+ +G+ A ++ R ++ S+S+
Sbjct: 1649 TKKAKFAFKKWLAYEKNIGDDEGAEQVKRRAIEYVSESH 1687
>UNIPROTKB|Q74DZ8 [details] [associations]
symbol:GSU1166 "TPR domain protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:1.25.40.10 RefSeq:NP_952219.1
ProteinModelPortal:Q74DZ8 GeneID:2688393 KEGG:gsu:GSU1166
PATRIC:22025104 HOGENOM:HOG000133252 OMA:NERESAC
ProtClustDB:CLSK828223 BioCyc:GSUL243231:GH27-1145-MONOMER
Uniprot:Q74DZ8
Length = 266
Score = 119 (46.9 bits), Expect = 0.00018, P = 0.00018
Identities = 47/213 (22%), Positives = 88/213 (41%)
Query: 85 GWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCN 144
G A++E +G + +ARQ KGL G+ L + + +E A +R+A + +
Sbjct: 46 GEALVE--EGKLAEARQQYEKGLALAPGDVDGQIALGDICLELAEHEAALAAYRRAVELD 103
Query: 145 PKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKL 204
P++ ++ + E A + FE+A++ P N FA++ G +G +K
Sbjct: 104 PRNADGYVNIGLVYNSLEETSKAIEAFEKALEIDPANVFAYNGLGDAWYGLGEREKAIDA 163
Query: 205 LKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEG 264
+ G ++P D +L L Y A K A +DP ++ G + +
Sbjct: 164 FRKGIELDPTDAAAHFNLGELYYDLGETEEAEKECLEAVRLDPDFTMSYLTLGSLYMDDE 223
Query: 265 NLDTARELYERALSIDSTTESAARCLQAWGVLE 297
+ A E L + + ++ + VLE
Sbjct: 224 RVKDAIRYLELYLQKEKSPQARETVDEVKAVLE 256
>TIGR_CMR|GSU_1166 [details] [associations]
symbol:GSU_1166 "TPR domain protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:1.25.40.10 RefSeq:NP_952219.1
ProteinModelPortal:Q74DZ8 GeneID:2688393 KEGG:gsu:GSU1166
PATRIC:22025104 HOGENOM:HOG000133252 OMA:NERESAC
ProtClustDB:CLSK828223 BioCyc:GSUL243231:GH27-1145-MONOMER
Uniprot:Q74DZ8
Length = 266
Score = 119 (46.9 bits), Expect = 0.00018, P = 0.00018
Identities = 47/213 (22%), Positives = 88/213 (41%)
Query: 85 GWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCN 144
G A++E +G + +ARQ KGL G+ L + + +E A +R+A + +
Sbjct: 46 GEALVE--EGKLAEARQQYEKGLALAPGDVDGQIALGDICLELAEHEAALAAYRRAVELD 103
Query: 145 PKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKL 204
P++ ++ + E A + FE+A++ P N FA++ G +G +K
Sbjct: 104 PRNADGYVNIGLVYNSLEETSKAIEAFEKALEIDPANVFAYNGLGDAWYGLGEREKAIDA 163
Query: 205 LKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEG 264
+ G ++P D +L L Y A K A +DP ++ G + +
Sbjct: 164 FRKGIELDPTDAAAHFNLGELYYDLGETEEAEKECLEAVRLDPDFTMSYLTLGSLYMDDE 223
Query: 265 NLDTARELYERALSIDSTTESAARCLQAWGVLE 297
+ A E L + + ++ + VLE
Sbjct: 224 RVKDAIRYLELYLQKEKSPQARETVDEVKAVLE 256
>ZFIN|ZDB-GENE-070105-3 [details] [associations]
symbol:ttc7b "tetratricopeptide repeat domain 7B"
species:7955 "Danio rerio" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001440 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF00515 Pfam:PF13181 PROSITE:PS50005
PROSITE:PS50293 SMART:SM00028 ZFIN:ZDB-GENE-070105-3
Gene3D:1.25.40.10 InterPro:IPR026900 PANTHER:PTHR23083:SF7
GeneTree:ENSGT00390000014400 EMBL:CT573303 EMBL:AL928712
IPI:IPI00801274 Ensembl:ENSDART00000087023 ArrayExpress:F1R1C9
Bgee:F1R1C9 Uniprot:F1R1C9
Length = 844
Score = 116 (45.9 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 28/103 (27%), Positives = 51/103 (49%)
Query: 240 RRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQR 299
+ A+ + P V G + GN+D A+ YE ALSI T + +Q G++ +
Sbjct: 721 QEAANLFPMSHNVLFMKGQVAELRGNVDEAKRWYEEALSISPTH---VKTMQRLGLILHQ 777
Query: 300 VGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEE 342
+ S A ++ R ++ +NS ++ W + ++ + QGN A E
Sbjct: 778 LQRYSLAEKILRDAVQVNSTAHDVWNSLGEVLQAQGNDAAATE 820
Score = 57 (25.1 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 37/149 (24%), Positives = 61/149 (40%)
Query: 3 CID--YWPEDGRPYVALGKVLSKQSKVAEARAIYAKGSQATQGENPYIWQCWAVLENKLG 60
CI +W E+G + + V+ K AE RA KG A G + A L
Sbjct: 442 CIGNLHWLEEGERFAKI--VIDMGEKAAEFRA---KGYLAI-GLVYSLKATDASLRGMQE 495
Query: 61 NIGK-ARELFD-ASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQ 118
K A F A +++ H+A ++ L + + I +A + + L+ G + +
Sbjct: 496 EYQKKALSAFQRAQSLSPTDHLAVFYLALQLAISR-QIPEALGYVRQALQLQGDDVHSLH 554
Query: 119 TLALLEAKANRYEQARNLFRQATKCNPKS 147
LALL + Y A N+ A P++
Sbjct: 555 LLALLLSAQKHYHDALNIIEMALSEYPEN 583
>UNIPROTKB|P73091 [details] [associations]
symbol:slr2048 "Slr2048 protein" species:1111708
"Synechocystis sp. PCC 6803 substr. Kazusa" [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=IDA]
InterPro:IPR001440 InterPro:IPR011717 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 Pfam:PF07721
Pfam:PF13181 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
GO:GO:0030288 eggNOG:COG0457 Gene3D:1.25.40.10 InterPro:IPR013105
Pfam:PF07719 EMBL:BA000022 GenomeReviews:BA000022_GR PIR:S75202
RefSeq:NP_440436.1 RefSeq:YP_005650494.1 ProteinModelPortal:P73091
IntAct:P73091 STRING:P73091 GeneID:12256184 GeneID:953736
KEGG:syn:slr2048 KEGG:syy:SYNGTS_0541 PATRIC:23838034 OMA:HAKSELM
ProtClustDB:CLSK892674 Uniprot:P73091
Length = 398
Score = 121 (47.7 bits), Expect = 0.00024, P = 0.00024
Identities = 59/305 (19%), Positives = 134/305 (43%)
Query: 113 NEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFE 172
NE + Q A ++ N + QA +++QA + ++ + + + +Q A + F+
Sbjct: 75 NELLRQGKAYVD-NGN-FPQAIAIYQQAAMLDGENAELFGSMGYLYARQGQFAEASRSFQ 132
Query: 173 RAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNP--RDPVLLQ-SLALLEYKY 229
+A++ +P N + G A G +++ ++ P R+ V + +L ++ +
Sbjct: 133 QALRVNPNNPDYYDGLGFSYARQGLLNEAASAYATAISLGPSSRESVKYRLALGIIMLQQ 192
Query: 230 STANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSI-DSTTESAAR 288
N R+L+ + ++ + G + + +AL + + +E +
Sbjct: 193 GDYNRVRQLYNEIHSLQSDNEEAAVMMGAALLQSSEYEQLITFNNQALRLFPNRSELTLQ 252
Query: 289 CLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRA-EEIRNLY 347
+A+ L Q G+L AARR LN + +S+ ++TWA+L E +GN A + +
Sbjct: 253 LGKAY--LAQ--GDLVAARRALEPRLNPDWRSFSLYLTWAELLEREGNFAGALDAYKQAL 308
Query: 348 FQQRTEVVDDASWVMGFMDIIDPA--LDRIKQLLNLEKSSYKEPSAYSPGDNESTDDEAS 405
+ T + ++++ +PA + + L L+ S+ Y G+ + D++
Sbjct: 309 RNEPTAIAAKIGTGRMYLELDNPAEAVWVFRDLTRLQPSN--ADFYYLLGEAYAVDEKID 366
Query: 406 VSRYS 410
+++ S
Sbjct: 367 LAKKS 371
>UNIPROTKB|F1P3T9 [details] [associations]
symbol:PDCD11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0008134 "transcription
factor binding" evidence=IEA] InterPro:IPR003029 InterPro:IPR003107
InterPro:IPR008847 InterPro:IPR011990 InterPro:IPR013026
Pfam:PF00575 Pfam:PF05843 PROSITE:PS50126 PROSITE:PS50293
SMART:SM00386 GO:GO:0005829 GO:GO:0005634 GO:GO:0006397
GO:GO:0003723 Gene3D:1.25.40.10 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR022967 SMART:SM00316
OMA:LHLADIY GeneTree:ENSGT00390000012228 EMBL:AADN02030831
IPI:IPI00603042 Ensembl:ENSGALT00000013446 Uniprot:F1P3T9
Length = 1841
Score = 125 (49.1 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 51/225 (22%), Positives = 95/225 (42%)
Query: 128 NRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQAS--PKNRFAW 185
+R Q+ + F + +P S W+ + +Q AR + ERA++ + +
Sbjct: 1569 SRQPQSADDFDRLVLSSPNSSILWLQYMAFHLQATEIEKARAVAERALKTICFREEQEKL 1628
Query: 186 HVWGIFEANM-GFIDKGKKLLKI-GHAVNPRDPV-LLQSLALLEYKYSTANLARKLFRRA 242
+VW + N+ + L+K+ AV +P+ + Q L + A +L+
Sbjct: 1629 NVW-VALLNLENMYGTEETLMKVFERAVQYNEPLKVFQHLCDIYASSEKYKQAEELYHTM 1687
Query: 243 SEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQRVGN 302
+ + VW+ + K+G + L ERAL T E + + LE R G+
Sbjct: 1688 LRRFRQEKSVWLKYASFLLKQGQTEATHRLLERALKALPTKEHVD-VISRFAQLEFRFGD 1746
Query: 303 LSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEIRNLY 347
A+ LF S+LN + W + + QG+ +EIR+++
Sbjct: 1747 PEHAKALFESTLNSYPKRTDIWSIYMDIMIKQGSQ---KEIRDIF 1788
Score = 52 (23.4 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 13/52 (25%), Positives = 23/52 (44%)
Query: 97 KKARQLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSC 148
+K R LL+ + C + ++ +LL E+ RNL R+ + C
Sbjct: 798 EKQRVLLSLKVSECSSGDSAAESFSLLNQYFKEVEEIRNLLRRREESGLARC 849
>UNIPROTKB|F1NQ36 [details] [associations]
symbol:CDC23 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000080 "G1 phase of mitotic cell cycle" evidence=IEA]
[GO:0005680 "anaphase-promoting complex" evidence=IEA] [GO:0007080
"mitotic metaphase plate congression" evidence=IEA] [GO:0030071
"regulation of mitotic metaphase/anaphase transition" evidence=IEA]
[GO:0070979 "protein K11-linked ubiquitination" evidence=IEA]
InterPro:IPR001440 InterPro:IPR007192 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 Pfam:PF04049
Pfam:PF13176 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
GO:GO:0030071 Gene3D:1.25.40.10 GO:GO:0005680 GO:GO:0070979
OMA:ACAQKCC GO:GO:0000080 GO:GO:0007080
GeneTree:ENSGT00550000074886 EMBL:AADN02028189 EMBL:AADN02028190
IPI:IPI00571741 Ensembl:ENSGALT00000012305 Uniprot:F1NQ36
Length = 594
Score = 121 (47.7 bits), Expect = 0.00044, P = 0.00044
Identities = 54/231 (23%), Positives = 100/231 (43%)
Query: 17 LGKVLSKQSKVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARELFDASTVAD 76
L + ++ + EA Y A ++ YI AV + + +I KA +F+ D
Sbjct: 231 LAHIYTELQLIEEALQKYQSLIDAGFSKSTYIISQIAVAYHNIRDIDKALSIFNELRKQD 290
Query: 77 KGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLE---AKANRYEQA 133
I ++ L L ++K LA L C ++Y +T ++ + +++E+A
Sbjct: 291 PYRIENMDTFSNL-LYVRSMKPELSYLAHNL--CEIDKYRVETCCVIGNYYSLRSQHEKA 347
Query: 134 RNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVWG-IFE 192
F++A K NP+ +W M+ +N AA Q + A++ + ++ AW+ G +E
Sbjct: 348 ALYFQRALKLNPRYLGAWTLMGHEYMEMKNTSAAIQAYRHAIEVNKRDYRAWYGLGQTYE 407
Query: 193 A-NMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRA 242
M F + H + P D +L +L K + A+K + RA
Sbjct: 408 ILKMPFYCL--YYYRRAHQLRPNDSRMLVALGECYEKLNQLVEAKKCYWRA 456
>UNIPROTKB|Q71ZG0 [details] [associations]
symbol:LMOf2365_1529 "TPR domain protein" species:265669
"Listeria monocytogenes serotype 4b str. F2365" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
eggNOG:COG0457 Gene3D:1.25.40.10 EMBL:AE017262
GenomeReviews:AE017262_GR RefSeq:YP_014127.1
ProteinModelPortal:Q71ZG0 STRING:Q71ZG0 GeneID:2797645
KEGG:lmf:LMOf2365_1529 PATRIC:20324297 HOGENOM:HOG000017288
OMA:IFFLANA ProtClustDB:CLSK872977 Uniprot:Q71ZG0
Length = 222
Score = 112 (44.5 bits), Expect = 0.00068, P = 0.00068
Identities = 44/193 (22%), Positives = 80/193 (41%)
Query: 60 GNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQT 119
GN+ +A +LF + + + L + ++A + L+ Y +
Sbjct: 14 GNLEEAVKLFTEVIEEHPSDPVGYINFGNVLLSMDDFERAELFFKRALELDDTVPAAYYS 73
Query: 120 LALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASP 179
L L + RY++A + F+ ATK ++ + +Q E A R+V+ +P
Sbjct: 74 LGNLYYELERYQEAADSFQNATKQGMENGDLFFMLGMSFVQMEELTLAMPYLLRSVELNP 133
Query: 180 KNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSL--ALLEYKYSTANLARK 237
++ A +GI A GF + +L+ V P DP L ++ A L ++ LA+
Sbjct: 134 EDGEALFQYGIVLARSGFYEDAINMLERVLLVKPEDPDALYNIGAAYLAWQGDIV-LAKN 192
Query: 238 LFRRASEIDPRHQ 250
F RA H+
Sbjct: 193 YFERAIATGASHE 205
>UNIPROTKB|Q233J3 [details] [associations]
symbol:TTHERM_00391570 "DNA polymerase" species:312017
"Tetrahymena thermophila SB210" [GO:0003887 "DNA-directed DNA
polymerase activity" evidence=IBA] [GO:0005634 "nucleus"
evidence=IBA] [GO:0005694 "chromosome" evidence=IBA] [GO:0016035
"zeta DNA polymerase complex" evidence=IBA] [GO:0019985
"translesion synthesis" evidence=IBA] [GO:0006297
"nucleotide-excision repair, DNA gap filling" evidence=IBA]
[GO:0008408 "3'-5' exonuclease activity" evidence=IBA]
InterPro:IPR001440 InterPro:IPR006133 InterPro:IPR006134
InterPro:IPR006172 InterPro:IPR011990 InterPro:IPR012337
InterPro:IPR013026 InterPro:IPR017964 InterPro:IPR019734
Pfam:PF00136 Pfam:PF00515 Pfam:PF03104 PRINTS:PR00106
PROSITE:PS00116 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
SMART:SM00486 GO:GO:0005634 GO:GO:0005694 GO:GO:0000166
GO:GO:0003677 GO:GO:0006260 Gene3D:1.25.40.10 InterPro:IPR006597
SMART:SM00671 SUPFAM:SSF53098 InterPro:IPR013105 Pfam:PF07719
GO:GO:0003887 GO:GO:0019985 Gene3D:3.90.1600.10 InterPro:IPR023211
InterPro:IPR025687 Pfam:PF14260 KO:K02350 GO:GO:0016035
EMBL:GG662770 RefSeq:XP_001011832.1 ProteinModelPortal:Q233J3
EnsemblProtists:EAR91587 GeneID:7847176 KEGG:tet:TTHERM_00391570
ProtClustDB:CLSZ2498360 Uniprot:Q233J3
Length = 2315
Score = 125 (49.1 bits), Expect = 0.00082, P = 0.00082
Identities = 45/235 (19%), Positives = 102/235 (43%)
Query: 89 LELRQGNIKKARQLLAKGLKFCGGNEYI-YQTLALLEAKANRYEQARNLFRQATKCNPKS 147
L L+QG +++A+ L LK+ +Y+ + L + +++ A F ++ + NP
Sbjct: 1798 LYLKQGKLEEAQNLFQLALKYYPKTDYLSHHLLGFTFYQQGKFQDALQKFNESLQINPLQ 1857
Query: 148 CASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAW-HVWGIFEANMGFIDKGKKLLK 206
+ + QQ A + +++A++ P A ++ ++ + + + + +
Sbjct: 1858 VDIYNTIGSIYDQQNMKDQAIKQYQKALEIQPSYYTALLNLGNLYFWDKNMVKEANECFQ 1917
Query: 207 IGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNL 266
+NP +L+ AL Y + A + + +A IDP+ ++ + + GN+
Sbjct: 1918 KALDINPNSLQVLKRAALFYYSNNQFQEAIQNYEKALSIDPQDYEIFGCLAQVYHQIGNI 1977
Query: 267 DTARELYERALSIDSTTESAARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSY 321
A ++ E+A+ + L G VG + A + + ++L IN + Y
Sbjct: 1978 QKAIKILEKAIKQNPRNHQFHYDL---GNYSSEVGLKNEAIQCYLNALEINPEFY 2029
>UNIPROTKB|F1RH91 [details] [associations]
symbol:CDC23 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070979 "protein K11-linked ubiquitination"
evidence=IEA] [GO:0030071 "regulation of mitotic metaphase/anaphase
transition" evidence=IEA] [GO:0007080 "mitotic metaphase plate
congression" evidence=IEA] [GO:0005680 "anaphase-promoting complex"
evidence=IEA] [GO:0000080 "G1 phase of mitotic cell cycle"
evidence=IEA] InterPro:IPR001440 InterPro:IPR007192
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF00515 Pfam:PF04049 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 GO:GO:0030071 Gene3D:1.25.40.10 GO:GO:0005680
GO:GO:0070979 OMA:ACAQKCC GO:GO:0000080 GO:GO:0007080
GeneTree:ENSGT00550000074886 EMBL:CU928408
Ensembl:ENSSSCT00000015651 Uniprot:F1RH91
Length = 594
Score = 118 (46.6 bits), Expect = 0.00095, P = 0.00095
Identities = 53/231 (22%), Positives = 99/231 (42%)
Query: 17 LGKVLSKQSKVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARELFDASTVAD 76
L + ++ + EA Y ++ YI AV + + +I KA +F+ D
Sbjct: 231 LAHIYTELQLIEEALQKYQNLIDVGFSKSSYIVSQIAVAYHNIRDIDKALSIFNELRKQD 290
Query: 77 KGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLE---AKANRYEQA 133
I ++ L L ++K LA L C ++Y +T ++ + +++E+A
Sbjct: 291 PYRIENMDTFSNL-LYVRSMKSELSYLAHNL--CEIDKYRVETCCVIGNYYSLRSQHEKA 347
Query: 134 RNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVWG-IFE 192
F++A K NP+ +W M+ +N AA Q + A++ + ++ AW+ G +E
Sbjct: 348 ALYFQRALKLNPRYLGAWTLMGHEYMEMKNTSAAIQAYRHAIEVNKRDYRAWYGLGQTYE 407
Query: 193 A-NMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRA 242
M F + H + P D +L +L K + A+K + RA
Sbjct: 408 ILKMPFYCL--YYYRRAHQLRPNDSRMLVALGECYEKLNQLVEAKKCYWRA 456
>UNIPROTKB|A1A4R8 [details] [associations]
symbol:CDC23 "Cell division cycle protein 23 homolog"
species:9913 "Bos taurus" [GO:0005680 "anaphase-promoting complex"
evidence=ISS] [GO:0070979 "protein K11-linked ubiquitination"
evidence=ISS] [GO:0030071 "regulation of mitotic metaphase/anaphase
transition" evidence=IEA] [GO:0007080 "mitotic metaphase plate
congression" evidence=IEA] [GO:0000080 "G1 phase of mitotic cell
cycle" evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR001440 InterPro:IPR007192 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 Pfam:PF04049
PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028 UniPathway:UPA00143
GO:GO:0051301 GO:GO:0030071 eggNOG:COG0457 Gene3D:1.25.40.10
GO:GO:0005680 GO:GO:0070979 HOGENOM:HOG000115852 KO:K03355
OMA:ACAQKCC GO:GO:0000080 GO:GO:0007080 EMBL:BC126843
IPI:IPI00699402 RefSeq:NP_001073735.1 UniGene:Bt.1176
ProteinModelPortal:A1A4R8 STRING:A1A4R8 PRIDE:A1A4R8
Ensembl:ENSBTAT00000011540 GeneID:512651 KEGG:bta:512651 CTD:8697
GeneTree:ENSGT00550000074886 InParanoid:A1A4R8 OrthoDB:EOG4J9MZH
NextBio:20870487 Uniprot:A1A4R8
Length = 597
Score = 118 (46.6 bits), Expect = 0.00096, P = 0.00096
Identities = 53/231 (22%), Positives = 99/231 (42%)
Query: 17 LGKVLSKQSKVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARELFDASTVAD 76
L + ++ + EA Y ++ YI AV + + +I KA +F+ D
Sbjct: 234 LAHIYTELQLIEEALQKYQNLIDVGFSKSSYIVSQIAVAYHNIRDIDKALSIFNELRKQD 293
Query: 77 KGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLE---AKANRYEQA 133
I ++ L L ++K LA L C ++Y +T ++ + +++E+A
Sbjct: 294 PYRIENMDTFSNL-LYVRSMKSELSYLAHNL--CEIDKYRVETCCVIGNYYSLRSQHEKA 350
Query: 134 RNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVWG-IFE 192
F++A K NP+ +W M+ +N AA Q + A++ + ++ AW+ G +E
Sbjct: 351 ALYFQRALKLNPRYLGAWTLMGHEYMEMKNTSAAIQAYRHAIEVNKRDYRAWYGLGQTYE 410
Query: 193 A-NMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRA 242
M F + H + P D +L +L K + A+K + RA
Sbjct: 411 ILKMPFYCL--YYYRRAHQLRPNDSRMLVALGECYEKLNQLVEAKKCYWRA 459
>UNIPROTKB|E2RHG6 [details] [associations]
symbol:CDC23 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070979 "protein K11-linked ubiquitination"
evidence=IEA] [GO:0030071 "regulation of mitotic metaphase/anaphase
transition" evidence=IEA] [GO:0007080 "mitotic metaphase plate
congression" evidence=IEA] [GO:0005680 "anaphase-promoting complex"
evidence=IEA] [GO:0000080 "G1 phase of mitotic cell cycle"
evidence=IEA] InterPro:IPR001440 InterPro:IPR007192
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF00515 Pfam:PF04049 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 GO:GO:0030071 Gene3D:1.25.40.10 GO:GO:0005680
GO:GO:0070979 KO:K03355 OMA:ACAQKCC GO:GO:0000080 GO:GO:0007080
CTD:8697 GeneTree:ENSGT00550000074886 EMBL:AAEX03007812
RefSeq:XP_538647.2 ProteinModelPortal:E2RHG6
Ensembl:ENSCAFT00000001873 GeneID:481526 KEGG:cfa:481526
NextBio:20856302 Uniprot:E2RHG6
Length = 597
Score = 118 (46.6 bits), Expect = 0.00096, P = 0.00096
Identities = 53/231 (22%), Positives = 99/231 (42%)
Query: 17 LGKVLSKQSKVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARELFDASTVAD 76
L + ++ + EA Y ++ YI AV + + +I KA +F+ D
Sbjct: 234 LAHIYTELQLIEEALQKYQNLIDVGFSKSSYIVSQIAVAYHNIRDIDKALSIFNELRKQD 293
Query: 77 KGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLE---AKANRYEQA 133
I ++ L L ++K LA L C ++Y +T ++ + +++E+A
Sbjct: 294 PYRIENMDTFSNL-LYVRSMKSELSYLAHNL--CEIDKYRVETCCVIGNYYSLRSQHEKA 350
Query: 134 RNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVWG-IFE 192
F++A K NP+ +W M+ +N AA Q + A++ + ++ AW+ G +E
Sbjct: 351 ALYFQRALKLNPRYLGAWTLMGHEYMEMKNTSAAIQAYRHAIEVNKRDYRAWYGLGQTYE 410
Query: 193 A-NMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRA 242
M F + H + P D +L +L K + A+K + RA
Sbjct: 411 ILKMPFYCL--YYYRRAHQLRPNDSRMLVALGECYEKLNQLVEAKKCYWRA 459
>UNIPROTKB|Q9UJX2 [details] [associations]
symbol:CDC23 "Cell division cycle protein 23 homolog"
species:9606 "Homo sapiens" [GO:0051301 "cell division"
evidence=IEA] [GO:0005680 "anaphase-promoting complex"
evidence=IDA] [GO:0030071 "regulation of mitotic metaphase/anaphase
transition" evidence=IDA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=TAS] [GO:0000080 "G1 phase of mitotic cell
cycle" evidence=IDA] [GO:0007080 "mitotic metaphase plate
congression" evidence=IDA] [GO:0007049 "cell cycle" evidence=TAS]
[GO:0007067 "mitosis" evidence=IDA] [GO:0070979 "protein K11-linked
ubiquitination" evidence=IDA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=TAS] [GO:0007091
"metaphase/anaphase transition of mitotic cell cycle" evidence=TAS]
[GO:0007096 "regulation of exit from mitosis" evidence=TAS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0007094
"mitotic spindle assembly checkpoint" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005622 "intracellular" evidence=IDA]
Reactome:REACT_6850 InterPro:IPR001440 InterPro:IPR007192
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF00515 Pfam:PF04049 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 UniPathway:UPA00143 GO:GO:0005829 Reactome:REACT_6900
Reactome:REACT_115566 GO:GO:0005654 Reactome:REACT_21300
GO:GO:0051301 GO:GO:0007094 EMBL:CH471062 eggNOG:COG0457
Gene3D:1.25.40.10 GO:GO:0051436 GO:GO:0004842 GO:GO:0005680
Reactome:REACT_8017 GO:GO:0031145 GO:GO:0051437 GO:GO:0070979
GO:GO:0007096 GO:GO:0007091 KO:K03355 OMA:ACAQKCC GO:GO:0000080
GO:GO:0007080 CTD:8697 OrthoDB:EOG4J9MZH EMBL:AB011472
EMBL:AK291610 EMBL:AK304635 EMBL:AY603103 EMBL:AK223250
EMBL:AC106752 EMBL:BC005258 EMBL:BC010944 EMBL:BC017713
EMBL:AF053977 EMBL:AF191341 EMBL:BT009810 IPI:IPI00005822
IPI:IPI00019237 IPI:IPI00939517 PIR:T51168 RefSeq:NP_004652.2
UniGene:Hs.73625 ProteinModelPortal:Q9UJX2 SMR:Q9UJX2
DIP:DIP-32959N IntAct:Q9UJX2 MINT:MINT-1437590 STRING:Q9UJX2
PhosphoSite:Q9UJX2 DMDM:254763423 PaxDb:Q9UJX2 PRIDE:Q9UJX2
DNASU:8697 Ensembl:ENST00000394884 Ensembl:ENST00000394886
GeneID:8697 KEGG:hsa:8697 UCSC:uc003lcl.3 UCSC:uc003lcm.1
GeneCards:GC05M137552 H-InvDB:HIX0005208 HGNC:HGNC:1724
HPA:HPA039593 MIM:603462 neXtProt:NX_Q9UJX2 PharmGKB:PA26258
HOVERGEN:HBG050858 InParanoid:Q9UJX2 GenomeRNAi:8697 NextBio:32613
ArrayExpress:Q9UJX2 Bgee:Q9UJX2 CleanEx:HS_CDC23
Genevestigator:Q9UJX2 GermOnline:ENSG00000094880 Uniprot:Q9UJX2
Length = 597
Score = 118 (46.6 bits), Expect = 0.00096, P = 0.00096
Identities = 53/231 (22%), Positives = 99/231 (42%)
Query: 17 LGKVLSKQSKVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARELFDASTVAD 76
L + ++ + EA Y ++ YI AV + + +I KA +F+ D
Sbjct: 234 LAHIYTELQLIEEALQKYQNLIDVGFSKSSYIVSQIAVAYHNIRDIDKALSIFNELRKQD 293
Query: 77 KGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLE---AKANRYEQA 133
I ++ L L ++K LA L C ++Y +T ++ + +++E+A
Sbjct: 294 PYRIENMDTFSNL-LYVRSMKSELSYLAHNL--CEIDKYRVETCCVIGNYYSLRSQHEKA 350
Query: 134 RNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVWG-IFE 192
F++A K NP+ +W M+ +N AA Q + A++ + ++ AW+ G +E
Sbjct: 351 ALYFQRALKLNPRYLGAWTLMGHEYMEMKNTSAAIQAYRHAIEVNKRDYRAWYGLGQTYE 410
Query: 193 A-NMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRA 242
M F + H + P D +L +L K + A+K + RA
Sbjct: 411 ILKMPFYCL--YYYRRAHQLRPNDSRMLVALGECYEKLNQLVEAKKCYWRA 459
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.131 0.402 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 476 476 0.00078 119 3 11 22 0.40 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 86
No. of states in DFA: 626 (67 KB)
Total size of DFA: 311 KB (2156 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 39.50u 0.10s 39.60t Elapsed: 00:00:02
Total cpu time: 39.55u 0.10s 39.65t Elapsed: 00:00:02
Start: Mon May 20 16:16:31 2013 End: Mon May 20 16:16:33 2013