BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011845
(476 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FNS4|MBB1_CHLRE PsbB mRNA maturation factor Mbb1, chloroplastic OS=Chlamydomonas
reinhardtii GN=MBB1 PE=2 SV=1
Length = 662
Score = 244 bits (622), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 134/378 (35%), Positives = 203/378 (53%), Gaps = 11/378 (2%)
Query: 2 KCIDYWPEDGRPYVALGKVLSKQSKVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGN 61
+C+ P D R YV LGK L +Q + EAR +Y G T NPYIW W LE + GN
Sbjct: 152 RCLALDPADPRAYVVLGKTLVQQKRYDEARQLYQDGCANTGNVNPYIWSAWGWLEARTGN 211
Query: 62 IGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFC-----GGNEYI 116
+ +AR+L+DA+ V D H AWH W +LE QGN +AR L +G++ C N Y+
Sbjct: 212 VERARKLYDAAVVVDGTHACAWHKWGMLEKGQGNFTRARDLWMQGIQRCRRKPQSQNAYL 271
Query: 117 YQTLALLEAKANRYEQARNLFRQATKC--NPKSCASWIAWSQMEMQQENNLAARQLFERA 174
Y L + A+ R +AR+ F + T+ S A W AW+ +E +Q + R LF +A
Sbjct: 272 YNALGCMAAQLGRVGEARSWFEEGTRSAEGAASVALWQAWAVLEAKQGDPTVVRYLFRKA 331
Query: 175 VQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANL 234
+ A+P++R+ W ++E G LL+ G +NP DP L Q+ AL+E +
Sbjct: 332 LGANPRSRYVHLAWALWERRQGNPQHCLALLRRGCELNPTDPALYQAWALVEKQAGRIER 391
Query: 235 ARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWG 294
AR+LF + DP +W A+G ME ++GN+D AR+L++ + D + S AWG
Sbjct: 392 ARELFEQGLRADPSDLYMWQAYGVMEAEQGNMDRARQLFQEGVWADPRSPSTVYVFHAWG 451
Query: 295 VLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEIRNLYFQQRTEV 354
LE + GN+ AR LF++++ ++ +S TW +W +E + G R +E+R +++ E
Sbjct: 452 ALEWQAGNVQTARELFKAAVRVDPKSETTWASWIAMESELGEIERVDELRIRQAERQWEF 511
Query: 355 VDDASWVMGFMDIIDPAL 372
V A GF P L
Sbjct: 512 VVPA----GFTTRPAPGL 525
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 97/225 (43%), Gaps = 8/225 (3%)
Query: 118 QTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQA 177
QTL L E K + Y+ A + R+ +P +++ + +QQ+ ARQL++
Sbjct: 132 QTLDLNERK-SLYKAAEDGLRRCLALDPADPRAYVVLGKTLVQQKRYDEARQLYQDGCAN 190
Query: 178 SPK-NRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLAR 236
+ N + W WG EA G +++ +KL V+ +LE AR
Sbjct: 191 TGNVNPYIWSAWGWLEARTGNVERARKLYDAAVVVDGTHACAWHKWGMLEKGQGNFTRAR 250
Query: 237 KLFRRA---SEIDPRHQPVWI--AWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQ 291
L+ + P+ Q ++ A G M + G + AR +E S A Q
Sbjct: 251 DLWMQGIQRCRRKPQSQNAYLYNALGCMAAQLGRVGEARSWFEEGTRSAEGAASVA-LWQ 309
Query: 292 AWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGN 336
AW VLE + G+ + R LFR +L N +S + WA E QGN
Sbjct: 310 AWAVLEAKQGDPTVVRYLFRKALGANPRSRYVHLAWALWERRQGN 354
>sp|Q54XP4|CRNL1_DICDI Crooked neck-like protein 1 OS=Dictyostelium discoideum GN=crnkl1
PE=3 SV=1
Length = 705
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 99/395 (25%), Positives = 165/395 (41%), Gaps = 53/395 (13%)
Query: 30 ARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARELFDASTVADKGHIAAWHGWAVL 89
ARAI+ + Q P W + E +L R +F+ + +I W +
Sbjct: 162 ARAIFERWMQWKP--EPQAWNSYLKFEQRLKLFENTRLIFEKYILVH-PYIKTWIKYTKF 218
Query: 90 ELRQGNIKKARQLLAKGLKFCG---GNEYIYQTLALLEAKANRYEQARNLFRQATKCNPK 146
E R GNI+ AR + + ++F G +E ++ A E K E+AR +++ A PK
Sbjct: 219 EERLGNIENARTIFQRAIEFLGEDGNDEQLFIAFAKFEEKYKEIERARVIYKYAIDHVPK 278
Query: 147 SCAS--WIAWSQMEMQQENNLAARQL--------FERAVQASPKNRFAWHVWGIFEANMG 196
S A + ++ E Q + + + +E ++ + KN W + E G
Sbjct: 279 SRAKDLFDTFTNFEKQHGDRIGIEDVVLGKKRFQYEEEIKKNSKNYDIWFDYLKMEEING 338
Query: 197 FIDKGKKLLKIGHAVNP---------RDPVLLQSLALLEYKYST-ANLARKLFRRASEID 246
I+K +++ + P R L + AL E S AR ++ ++
Sbjct: 339 EIEKTREIYERSIGNLPPTNEKKHWKRYIYLWINYALFEELISKDMERARSVYSECIKLI 398
Query: 247 PRHQ----PVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQRVGN 302
P + +WI + E ++ NLD AR +Y +A+ + ++ + LE +GN
Sbjct: 399 PHKEFSFSKIWILYANFEIRQLNLDKARLIYGQAIGRNP----KSKIFDQYIHLEIELGN 454
Query: 303 LSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEIRNLYFQQ----RTEVVDDA 358
R L+ L I + W +AQLE + G +VRA I L QQ R EVV
Sbjct: 455 FDRVRTLYEKYLEIMPDNCDAWCKFAQLETELGETVRARAIFELAIQQPNLDRPEVV--- 511
Query: 359 SWVMGFMDIIDPAL-----DRIKQLLN--LEKSSY 386
+ D ID + D +KQL LEK+++
Sbjct: 512 -----WKDFIDSEIQLKQFDFVKQLYRKLLEKTNH 541
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 131/292 (44%), Gaps = 16/292 (5%)
Query: 64 KARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALL 123
+ R+ +++ ++ A + +A E Q ++ +AR + + L ++ A +
Sbjct: 59 RKRQQYESLLGRNRKTAAIYIKYAAWEESQKDLTRARSVFERFLDIDHRIPTVWIKYAEM 118
Query: 124 EAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRF 183
E K ARN++ +A P+ W ++ ME N AAR +FER +Q P+ +
Sbjct: 119 EMKNKNINLARNIWDRAVCLLPRVSQLWFKYTFMEDMLGNYPAARAIFERWMQWKPEPQ- 177
Query: 184 AWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRAS 243
AW+ + FE + + + + + V+P ++ E + N AR +F+RA
Sbjct: 178 AWNSYLKFEQRLKLFENTRLIFEKYILVHPYIKTWIKYTKFEERLGNIEN-ARTIFQRAI 236
Query: 244 EI---DPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCL-QAWGVLEQR 299
E D + ++IA+ E K ++ AR +Y+ A ID +S A+ L + E++
Sbjct: 237 EFLGEDGNDEQLFIAFAKFEEKYKEIERARVIYKYA--IDHVPKSRAKDLFDTFTNFEKQ 294
Query: 300 VGN--------LSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEI 343
G+ L R + + NS++Y W + ++EE G + EI
Sbjct: 295 HGDRIGIEDVVLGKKRFQYEEEIKKNSKNYDIWFDYLKMEEINGEIEKTREI 346
Score = 52.0 bits (123), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 98/229 (42%), Gaps = 18/229 (7%)
Query: 131 EQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVWGI 190
EQ + + + PK+ + Q E++ + L RQ +E + + K + +
Sbjct: 25 EQILRVAHENQQTLPKAPPKQVITDQEELE-DYRLRKRQQYESLLGRNRKTAAIYIKYAA 83
Query: 191 FEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDPRHQ 250
+E + + + + + + ++ R P + A +E K NLAR ++ RA + PR
Sbjct: 84 WEESQKDLTRARSVFERFLDIDHRIPTVWIKYAEMEMKNKNINLARNIWDRAVCLLPRVS 143
Query: 251 PVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGV---LEQRVGNLSAAR 307
+W + +ME GN AR ++ER + QAW EQR+ R
Sbjct: 144 QLWFKYTFMEDMLGNYPAARAIFERWMQWKPEP-------QAWNSYLKFEQRLKLFENTR 196
Query: 308 RLFRSSLNINSQSYI-TWMTWAQLEEDQGNSVRAEEIRNLYFQQRTEVV 355
+F + ++ YI TW+ + + EE GN A I FQ+ E +
Sbjct: 197 LIFEKYILVH--PYIKTWIKYTKFEERLGNIENARTI----FQRAIEFL 239
>sp|Q7SGD2|CLF1_NEUCR Pre-mRNA-splicing factor clf-1 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=clf-1 PE=3 SV=1
Length = 695
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 138/310 (44%), Gaps = 20/310 (6%)
Query: 50 QCWAVLENKLGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKF 109
Q +A LE G+ R+ F+ ++ ++ W +A EL Q +AR + + L
Sbjct: 42 QRFADLEELKEYQGRKRKEFEDYVRRNRVRLSNWLQYAQWELEQKEFARARSVFERALDV 101
Query: 110 CGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQ 169
N ++ E K ARNL +A P+ + W + + + RQ
Sbjct: 102 HPNNTQLWIRYVQAEIKNRNINHARNLLDRAVTRLPRVTSLWYQYLYVMEMLGDIPGTRQ 161
Query: 170 LFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKY 229
+F+R ++ P + AW + E G D+ +++ + AV+P +P A E +Y
Sbjct: 162 VFDRWMKWQPDEQ-AWSAYIRLEKRYGEFDRAREIFRAFTAVHP-EPRTWLKWAKFEEEY 219
Query: 230 STANLARKLFRRASEI-------DPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDST 282
T++ R++F+ A + D + ++IA+ E + + AR +Y+ +D+
Sbjct: 220 GTSDTVREVFQTAIQTIAETLGDDAVDERIFIAFARYEARLREYERARAIYK--FGLDNL 277
Query: 283 TESAARCLQA-WGVLEQRVGN--------LSAARRLFRSSLNINSQSYITWMTWAQLEED 333
S + L A + E++ G+ L+ RRL+ + N+++Y W +A+LEE
Sbjct: 278 PRSKSMTLHAHYTTFEKQFGDKEGVEDVILTKRRRLYEEQVKENAKNYDVWFDFARLEES 337
Query: 334 QGNSVRAEEI 343
G+ R E+
Sbjct: 338 GGDVDRTREV 347
Score = 72.8 bits (177), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 138/333 (41%), Gaps = 36/333 (10%)
Query: 49 WQCWAVLENKLGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGN-------IKKARQ 101
W + LE + G +ARE+F A T A W WA E G + A Q
Sbjct: 176 WSAYIRLEKRYGEFDRAREIFRAFT-AVHPEPRTWLKWAKFEEEYGTSDTVREVFQTAIQ 234
Query: 102 LLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIA--WSQMEM 159
+A+ L +E I+ A EA+ YE+AR +++ P+S + + ++ E
Sbjct: 235 TIAETLGDDAVDERIFIAFARYEARLREYERARAIYKFGLDNLPRSKSMTLHAHYTTFEK 294
Query: 160 QQENNLAA--------RQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAV 211
Q + R+L+E V+ + KN W + E + G +D+ +++ + A
Sbjct: 295 QFGDKEGVEDVILTKRRRLYEEQVKENAKNYDVWFDFARLEESGGDVDRTREVYERAIAQ 354
Query: 212 NP--------RDPVLLQSLALLEYKYSTANL--ARKLFRRASEIDPRHQ----PVWIAWG 257
P R + L + + T ++ AR+++ + P + VW+A
Sbjct: 355 VPPTQEKRHWRRYIFLFLFYAIWEERETKDIGRARQIYDTCLNLIPHKKFTFAKVWVAKA 414
Query: 258 WMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQRVGNLSAARRLFRSSLNIN 317
E ++G L TAR+ RA+ + + + + +LEQ++ R L+ + N
Sbjct: 415 HFEIRQGQLTTARKTLGRAIGMCPKD----KIFKEYILLEQKLYEFERCRTLYEKHVMYN 470
Query: 318 SQSYITWMTWAQLEEDQGNSVRAEEIRNLYFQQ 350
+ TW+ WA+LE + R I L Q
Sbjct: 471 PANCQTWIKWAELERGLDDLERTRAIFELAVSQ 503
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/346 (20%), Positives = 145/346 (41%), Gaps = 31/346 (8%)
Query: 23 KQSKVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARELFDASTVADKGHIAA 82
+Q + A AR+++ + N +W + E K NI AR L D + +
Sbjct: 84 EQKEFARARSVFERALD-VHPNNTQLWIRYVQAEIKNRNINHARNLLDRAVTRLPRVTSL 142
Query: 83 WHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATK 142
W+ + + G+I RQ+ + +K+ +E + LE + +++AR +FR T
Sbjct: 143 WYQYLYVMEMLGDIPGTRQVFDRWMKW-QPDEQAWSAYIRLEKRYGEFDRAREIFRAFTA 201
Query: 143 CNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPK-------NRFAWHVWGIFEANM 195
+P+ +W+ W++ E + + R++F+ A+Q + + + + +EA +
Sbjct: 202 VHPEP-RTWLKWAKFEEEYGTSDTVREVFQTAIQTIAETLGDDAVDERIFIAFARYEARL 260
Query: 196 GFIDKGKKLLKIGHAVNPRDP--VLLQSLALLEYKYS--------TANLARKLFRRASEI 245
++ + + K G PR L E ++ R+L+ +
Sbjct: 261 REYERARAIYKFGLDNLPRSKSMTLHAHYTTFEKQFGDKEGVEDVILTKRRRLYEEQVKE 320
Query: 246 DPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAAR------CLQAWGVLEQR 299
+ ++ VW + +E G++D RE+YERA++ T+ + + E+R
Sbjct: 321 NAKNYDVWFDFARLEESGGDVDRTREVYERAIAQVPPTQEKRHWRRYIFLFLFYAIWEER 380
Query: 300 -VGNLSAARRLFRSSLNINSQSYIT----WMTWAQLEEDQGNSVRA 340
++ AR+++ + LN+ T W+ A E QG A
Sbjct: 381 ETKDIGRARQIYDTCLNLIPHKKFTFAKVWVAKAHFEIRQGQLTTA 426
Score = 39.7 bits (91), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 61/294 (20%), Positives = 116/294 (39%), Gaps = 26/294 (8%)
Query: 10 DGRPYVALGKVLSKQSKVAEARAIYAKG-SQATQGENPYIWQCWAVLENKLGN------- 61
D R ++A + ++ + ARAIY G + ++ + + E + G+
Sbjct: 246 DERIFIAFARYEARLREYERARAIYKFGLDNLPRSKSMTLHAHYTTFEKQFGDKEGVEDV 305
Query: 62 -IGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNE------ 114
+ K R L++ + + W +A LE G++ + R++ + + +
Sbjct: 306 ILTKRRRLYEEQVKENAKNYDVWFDFARLEESGGDVDRTREVYERAIAQVPPTQEKRHWR 365
Query: 115 -YIYQTL--ALLEAKANR-YEQARNLFRQATKCNPKS----CASWIAWSQMEMQQENNLA 166
YI+ L A+ E + + +AR ++ P W+A + E++Q
Sbjct: 366 RYIFLFLFYAIWEERETKDIGRARQIYDTCLNLIPHKKFTFAKVWVAKAHFEIRQGQLTT 425
Query: 167 ARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLE 226
AR+ RA+ PK++ + + + E + ++ + L + NP + A LE
Sbjct: 426 ARKTLGRAIGMCPKDKI-FKEYILLEQKLYEFERCRTLYEKHVMYNPANCQTWIKWAELE 484
Query: 227 YKYSTANLARKLFRRASEIDPRHQP--VWIAWGWMEWKEGNLDTARELYERALS 278
R +F A P VW A+ E +EG + R LYER L
Sbjct: 485 RGLDDLERTRAIFELAVSQPILDMPEVVWKAYIDFEEEEGEYERTRALYERLLE 538
>sp|Q9HF03|CLF1_CRYNH Pre-mRNA-splicing factor CLF1 OS=Cryptococcus neoformans var.
grubii serotype A (strain H99 / ATCC 208821 / CBS 10515
/ FGSC 9487) GN=CLF1 PE=3 SV=1
Length = 724
Score = 80.5 bits (197), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 106/226 (46%), Gaps = 12/226 (5%)
Query: 124 EAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRF 183
EA N YE++R++F +A +P+S WI ++ ME++ N AR LF+RA+ P+
Sbjct: 85 EASQNEYERSRSVFERALDVDPRSVDLWIKYTDMELKARNINHARNLFDRAITLLPRVDA 144
Query: 184 AWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRR-- 241
W+ + E + + +++ + P D QS LE +Y+ + A ++ R
Sbjct: 145 LWYKYVYLEELLLNVSGARQIFERWMQWEPNDKA-WQSYIKLEERYNELDRASAIYERWI 203
Query: 242 ASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSI----DSTTESAARCLQAWGVLE 297
A P++ W+AW E G D ARE+++ AL + E A A+ +E
Sbjct: 204 ACRPIPKN---WVAWAKFEEDRGQPDKAREVFQTALEFFGDEEEQVEKAQSVFAAFARME 260
Query: 298 QRVGNLSAARRLFRSSLN--INSQSYITWMTWAQLEEDQGNSVRAE 341
R+ AR +++ +L S+S + + + E+ G+ E
Sbjct: 261 TRLKEFERARVIYKFALARLPRSKSASLYAQYTKFEKQHGDRAGVE 306
Score = 72.0 bits (175), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 114/281 (40%), Gaps = 61/281 (21%)
Query: 47 YIWQCWAVLEN-KLGNIGKARELFDAST--VADKGHIAA--WHGWAVLELRQGNIKKARQ 101
Y+W +A E + +AR+++ A+ V K A W +A E+R+ ++ AR+
Sbjct: 382 YLWLQYAAFEEIDTKDYDRARDVYKAAVKLVPHKTFTFAKLWLAYAYFEIRRLDVSAARK 441
Query: 102 LLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQ 161
+L G+ C + ++ LE + +++ R L+ + +P ++WI W+Q+E
Sbjct: 442 VLGAGIGMCPKPK-LFTGYIELEMRLREFDRVRTLYEKFLTYDPSLSSAWIQWTQVESAV 500
Query: 162 ENNLAARQLFERAVQAS-PKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQ 220
E+ R +FE AVQ S W + FEA G ++ +
Sbjct: 501 EDFERVRAIFELAVQQSLDMPEIVWKAYIDFEAGEGERERAR------------------ 542
Query: 221 SLALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEW----------------KEG 264
NL +L R S H VWI++ ME + G
Sbjct: 543 ------------NLYERLLERTS-----HVKVWISYALMEIATLGGGEDEDGNEIEGEAG 585
Query: 265 NLDTARELYERA---LSIDSTTESAARCLQAWGVLEQRVGN 302
+ D AR+++ER L E A L++W EQ G+
Sbjct: 586 DADLARKVFERGYKDLRAKGEKEDRAVLLESWKSFEQEHGD 626
Score = 59.3 bits (142), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 96/226 (42%), Gaps = 10/226 (4%)
Query: 133 ARNLFRQA-TKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVWGIF 191
A L R+A + P A +E E R FE ++ S + AW + +
Sbjct: 25 AEQLLREAQERQEPTIQAPKQRVQDLEELSEFQARKRTEFESRIRYSRDSILAWTKYAQW 84
Query: 192 EANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDPRHQP 251
EA+ ++ + + + V+PR L +E K N AR LF RA + PR
Sbjct: 85 EASQNEYERSRSVFERALDVDPRSVDLWIKYTDMELKARNINHARNLFDRAITLLPRVDA 144
Query: 252 VWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQRVGNLSAARRLFR 311
+W + ++E N+ AR+++ER + E + Q++ LE+R L A ++
Sbjct: 145 LWYKYVYLEELLLNVSGARQIFERWMQW----EPNDKAWQSYIKLEERYNELDRASAIYE 200
Query: 312 SSLNINSQSYITWMTWAQLEEDQGNSVRAEEIRNLYFQQRTEVVDD 357
+ W+ WA+ EED+G +A E+ FQ E D
Sbjct: 201 RWIACRPIP-KNWVAWAKFEEDRGQPDKAREV----FQTALEFFGD 241
Score = 58.9 bits (141), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 81/378 (21%), Positives = 148/378 (39%), Gaps = 51/378 (13%)
Query: 14 YVALGKVLSKQSKVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARELFDAST 73
YV L ++L V+ AR I+ + Q N WQ + LE + + +A +++
Sbjct: 149 YVYLEELLLN---VSGARQIFERWMQWEP--NDKAWQSYIKLEERYNELDRASAIYE-RW 202
Query: 74 VADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNE-------YIYQTLALLEAK 126
+A + W WA E +G KAR++ L+F G E ++ A +E +
Sbjct: 203 IACRPIPKNWVAWAKFEEDRGQPDKAREVFQTALEFFGDEEEQVEKAQSVFAAFARMETR 262
Query: 127 ANRYEQARNLFRQATKCNP--KSCASWIAWSQMEMQQENN-------LAARQL-FERAVQ 176
+E+AR +++ A P KS + + +++ E Q + L R++ +E +
Sbjct: 263 LKEFERARVIYKFALARLPRSKSASLYAQYTKFEKQHGDRAGVELTVLGKRRIQYEEELA 322
Query: 177 ASPKNRFAWHVWGIFEANMGFIDK--GKKLLKI------GHAVNPRDPVL---------- 218
P N AW E + D+ G+ + + AV P L
Sbjct: 323 YDPTNYDAWFSLARLEEDAYRADREDGEDVEPMRVREVYERAVANVPPALEKRYWRRYIY 382
Query: 219 --LQSLALLEYKYSTANLARKLFRRASEIDPRHQ----PVWIAWGWMEWKEGNLDTAREL 272
LQ A E + AR +++ A ++ P +W+A+ + E + ++ AR++
Sbjct: 383 LWLQYAAFEEIDTKDYDRARDVYKAAVKLVPHKTFTFAKLWLAYAYFEIRRLDVSAARKV 442
Query: 273 YERALSIDSTTESAARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEE 332
+ + + + LE R+ R L+ L + W+ W Q+E
Sbjct: 443 LGAGIGMCPKP----KLFTGYIELEMRLREFDRVRTLYEKFLTYDPSLSSAWIQWTQVES 498
Query: 333 DQGNSVRAEEIRNLYFQQ 350
+ R I L QQ
Sbjct: 499 AVEDFERVRAIFELAVQQ 516
Score = 52.0 bits (123), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 65/129 (50%), Gaps = 2/129 (1%)
Query: 48 IWQCWAVLENKLGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGL 107
+W + +E K NI AR LFD + A W+ + LE N+ ARQ+ + +
Sbjct: 111 LWIKYTDMELKARNINHARNLFDRAITLLPRVDALWYKYVYLEELLLNVSGARQIFERWM 170
Query: 108 KFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAA 167
++ N+ +Q+ LE + N ++A ++ + C P +W+AW++ E + A
Sbjct: 171 QW-EPNDKAWQSYIKLEERYNELDRASAIYERWIACRP-IPKNWVAWAKFEEDRGQPDKA 228
Query: 168 RQLFERAVQ 176
R++F+ A++
Sbjct: 229 REVFQTALE 237
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 78/378 (20%), Positives = 145/378 (38%), Gaps = 56/378 (14%)
Query: 14 YVALGKVLSKQSKVAEARAIYAK-----GSQATQGENPY-IWQCWAVLENKLGNIGKARE 67
+VA K + + +AR ++ G + Q E ++ +A +E +L +AR
Sbjct: 212 WVAWAKFEEDRGQPDKAREVFQTALEFFGDEEEQVEKAQSVFAAFARMETRLKEFERARV 271
Query: 68 LF-----------DASTVADKGHIAAWHG-WAVLELRQGNIKKARQLLAKGLKFCGGNEY 115
++ AS A HG A +EL + K R + L + N
Sbjct: 272 IYKFALARLPRSKSASLYAQYTKFEKQHGDRAGVEL--TVLGKRRIQYEEELAYDPTNYD 329
Query: 116 IYQTLALLEAKANRYEQ----------ARNLFRQATKCNPKSCAS---------WIAWSQ 156
+ +LA LE A R ++ R ++ +A P + W+ ++
Sbjct: 330 AWFSLARLEEDAYRADREDGEDVEPMRVREVYERAVANVPPALEKRYWRRYIYLWLQYAA 389
Query: 157 ME-MQQENNLAARQLFERAVQASPKNRFA----WHVWGIFEANMGFIDKGKKLLKIGHAV 211
E + ++ AR +++ AV+ P F W + FE + +K+L G +
Sbjct: 390 FEEIDTKDYDRARDVYKAAVKLVPHKTFTFAKLWLAYAYFEIRRLDVSAARKVLGAGIGM 449
Query: 212 NPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARE 271
P+ P L LE + + R L+ + DP WI W +E + + R
Sbjct: 450 CPK-PKLFTGYIELEMRLREFDRVRTLYEKFLTYDPSLSSAWIQWTQVESAVEDFERVRA 508
Query: 272 LYERALSIDSTTESAARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQL- 330
++E L++ + + +A+ E G AR L+ L S + W+++A +
Sbjct: 509 IFE--LAVQQSLDMPEIVWKAYIDFEAGEGERERARNLYERLLERTSHVKV-WISYALME 565
Query: 331 -------EEDQGNSVRAE 341
E++ GN + E
Sbjct: 566 IATLGGGEDEDGNEIEGE 583
>sp|P0CO10|CLF1_CRYNJ Pre-mRNA-splicing factor CLF1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=CLF1 PE=3 SV=1
Length = 726
Score = 78.6 bits (192), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 105/226 (46%), Gaps = 12/226 (5%)
Query: 124 EAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRF 183
EA N YE++R++F +A +P+S WI ++ ME++ N AR LF+RA+ P+
Sbjct: 85 EASQNEYERSRSVFERALDVDPRSVDLWIKYTDMELKARNINHARNLFDRAITLLPRVDA 144
Query: 184 AWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRR-- 241
W+ + E + + +++ + P D QS LE +Y+ + A ++ R
Sbjct: 145 LWYKYVYLEELLLNVSGARQIFERWMQWEPNDKA-WQSYIKLEERYNELDRASAIYERWI 203
Query: 242 ASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSI----DSTTESAARCLQAWGVLE 297
A P++ W+ W E G D ARE+++ AL + E A A+ +E
Sbjct: 204 ACRPIPKN---WVTWAKFEEDRGQPDKAREVFQTALEFFGDEEEQVEKAQSVFAAFARME 260
Query: 298 QRVGNLSAARRLFRSSLN--INSQSYITWMTWAQLEEDQGNSVRAE 341
R+ AR +++ +L S+S + + + E+ G+ E
Sbjct: 261 TRLKEFERARVIYKFALARLPRSKSASLYAQYTKFEKQHGDRAGVE 306
Score = 72.4 bits (176), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 114/281 (40%), Gaps = 61/281 (21%)
Query: 47 YIWQCWAVLEN-KLGNIGKARELFDAST--VADKGHIAA--WHGWAVLELRQGNIKKARQ 101
Y+W +A E + +AR+++ A+ V K A W +A E+R+ ++ AR+
Sbjct: 382 YLWLQYAAFEEIDTKDYDRARDVYKAAVKLVPHKTFTFAKLWLAYAYFEIRRLDVSAARK 441
Query: 102 LLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQ 161
+L G+ C + ++ LE + +++ R L+ + +P ++WI W+Q+E
Sbjct: 442 VLGAGIGMCPKPK-LFTGYIELEMRLREFDRVRTLYEKFLTYDPSLSSAWIQWTQVESAV 500
Query: 162 ENNLAARQLFERAVQAS-PKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQ 220
E+ R +FE AVQ S W + FEA G ++ +
Sbjct: 501 EDFERVRAIFELAVQQSLDMPEIVWKAYIDFEAGEGERERAR------------------ 542
Query: 221 SLALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEW----------------KEG 264
NL +L R S H VWI++ ME + G
Sbjct: 543 ------------NLYERLLERTS-----HVKVWISYALMEIATLGGGEDEDGNEIEGEAG 585
Query: 265 NLDTARELYERA---LSIDSTTESAARCLQAWGVLEQRVGN 302
+ D AR+++ER L E A L++W EQ G+
Sbjct: 586 DADLARQVFERGYKDLRAKGEKEDRAVLLESWKSFEQEHGD 626
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 97/226 (42%), Gaps = 10/226 (4%)
Query: 133 ARNLFRQAT-KCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVWGIF 191
A L R+A + P A +E E R FE ++ S + AW + +
Sbjct: 25 AEQLLREAQERQEPAIQAPKQRVQDLEELSEFQARKRTEFESRIRYSRDSILAWTKYAQW 84
Query: 192 EANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDPRHQP 251
EA+ ++ + + + V+PR L +E K N AR LF RA + PR
Sbjct: 85 EASQNEYERSRSVFERALDVDPRSVDLWIKYTDMELKARNINHARNLFDRAITLLPRVDA 144
Query: 252 VWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQRVGNLSAARRLFR 311
+W + ++E N+ AR+++ER + E + Q++ LE+R L A ++
Sbjct: 145 LWYKYVYLEELLLNVSGARQIFERWMQW----EPNDKAWQSYIKLEERYNELDRASAIYE 200
Query: 312 SSLNINSQSYITWMTWAQLEEDQGNSVRAEEIRNLYFQQRTEVVDD 357
+ W+TWA+ EED+G +A E+ FQ E D
Sbjct: 201 RWIACRPIP-KNWVTWAKFEEDRGQPDKAREV----FQTALEFFGD 241
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 81/378 (21%), Positives = 148/378 (39%), Gaps = 51/378 (13%)
Query: 14 YVALGKVLSKQSKVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARELFDAST 73
YV L ++L V+ AR I+ + Q N WQ + LE + + +A +++
Sbjct: 149 YVYLEELLLN---VSGARQIFERWMQWEP--NDKAWQSYIKLEERYNELDRASAIYE-RW 202
Query: 74 VADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNE-------YIYQTLALLEAK 126
+A + W WA E +G KAR++ L+F G E ++ A +E +
Sbjct: 203 IACRPIPKNWVTWAKFEEDRGQPDKAREVFQTALEFFGDEEEQVEKAQSVFAAFARMETR 262
Query: 127 ANRYEQARNLFRQATKCNP--KSCASWIAWSQMEMQQENN-------LAARQL-FERAVQ 176
+E+AR +++ A P KS + + +++ E Q + L R++ +E +
Sbjct: 263 LKEFERARVIYKFALARLPRSKSASLYAQYTKFEKQHGDRAGVELTVLGKRRIQYEEELA 322
Query: 177 ASPKNRFAWHVWGIFEANMGFIDK--GKKLLKI------GHAVNPRDPVL---------- 218
P N AW E + D+ G+ + + AV P L
Sbjct: 323 YDPTNYDAWFSLARLEEDAYRADREDGEDVEPMRVREVYERAVANVPPALEKRYWRRYIY 382
Query: 219 --LQSLALLEYKYSTANLARKLFRRASEIDPRHQ----PVWIAWGWMEWKEGNLDTAREL 272
LQ A E + AR +++ A ++ P +W+A+ + E + ++ AR++
Sbjct: 383 LWLQYAAFEEIDTKDYDRARDVYKAAVKLVPHKTFTFAKLWLAYAYFEIRRLDVSAARKV 442
Query: 273 YERALSIDSTTESAARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEE 332
+ + + + LE R+ R L+ L + W+ W Q+E
Sbjct: 443 LGAGIGMCPKP----KLFTGYIELEMRLREFDRVRTLYEKFLTYDPSLSSAWIQWTQVES 498
Query: 333 DQGNSVRAEEIRNLYFQQ 350
+ R I L QQ
Sbjct: 499 AVEDFERVRAIFELAVQQ 516
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 64/129 (49%), Gaps = 2/129 (1%)
Query: 48 IWQCWAVLENKLGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGL 107
+W + +E K NI AR LFD + A W+ + LE N+ ARQ+ + +
Sbjct: 111 LWIKYTDMELKARNINHARNLFDRAITLLPRVDALWYKYVYLEELLLNVSGARQIFERWM 170
Query: 108 KFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAA 167
++ N+ +Q+ LE + N ++A ++ + C P +W+ W++ E + A
Sbjct: 171 QW-EPNDKAWQSYIKLEERYNELDRASAIYERWIACRP-IPKNWVTWAKFEEDRGQPDKA 228
Query: 168 RQLFERAVQ 176
R++F+ A++
Sbjct: 229 REVFQTALE 237
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 84/204 (41%), Gaps = 17/204 (8%)
Query: 151 WIAWSQME-MQQENNLAARQLFERAVQASPKNRFA----WHVWGIFEANMGFIDKGKKLL 205
W+ ++ E + ++ AR +++ AV+ P F W + FE + +K+L
Sbjct: 384 WLQYAAFEEIDTKDYDRARDVYKAAVKLVPHKTFTFAKLWLAYAYFEIRRLDVSAARKVL 443
Query: 206 KIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGN 265
G + P+ P L LE + + R L+ + DP WI W +E +
Sbjct: 444 GAGIGMCPK-PKLFTGYIELEMRLREFDRVRTLYEKFLTYDPSLSSAWIQWTQVESAVED 502
Query: 266 LDTARELYERALSIDSTTESAARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWM 325
+ R ++E L++ + + +A+ E G AR L+ L S + W+
Sbjct: 503 FERVRAIFE--LAVQQSLDMPEIVWKAYIDFEAGEGERERARNLYERLLERTSHVKV-WI 559
Query: 326 TWAQL--------EEDQGNSVRAE 341
++A + E++ GN + E
Sbjct: 560 SYALMEIATLGGGEDEDGNEIEGE 583
>sp|P0CO11|CLF1_CRYNB Pre-mRNA-splicing factor CLF1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=CLF1 PE=3 SV=1
Length = 726
Score = 78.6 bits (192), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 105/226 (46%), Gaps = 12/226 (5%)
Query: 124 EAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRF 183
EA N YE++R++F +A +P+S WI ++ ME++ N AR LF+RA+ P+
Sbjct: 85 EASQNEYERSRSVFERALDVDPRSVDLWIKYTDMELKARNINHARNLFDRAITLLPRVDA 144
Query: 184 AWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRR-- 241
W+ + E + + +++ + P D QS LE +Y+ + A ++ R
Sbjct: 145 LWYKYVYLEELLLNVSGARQIFERWMQWEPNDKA-WQSYIKLEERYNELDRASAIYERWI 203
Query: 242 ASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSI----DSTTESAARCLQAWGVLE 297
A P++ W+ W E G D ARE+++ AL + E A A+ +E
Sbjct: 204 ACRPIPKN---WVTWAKFEEDRGQPDKAREVFQTALEFFGDEEEQVEKAQSVFAAFARME 260
Query: 298 QRVGNLSAARRLFRSSLN--INSQSYITWMTWAQLEEDQGNSVRAE 341
R+ AR +++ +L S+S + + + E+ G+ E
Sbjct: 261 TRLKEFERARVIYKFALARLPRSKSASLYAQYTKFEKQHGDRAGVE 306
Score = 72.4 bits (176), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 114/281 (40%), Gaps = 61/281 (21%)
Query: 47 YIWQCWAVLEN-KLGNIGKARELFDAST--VADKGHIAA--WHGWAVLELRQGNIKKARQ 101
Y+W +A E + +AR+++ A+ V K A W +A E+R+ ++ AR+
Sbjct: 382 YLWLQYAAFEEIDTKDYDRARDVYKAAVKLVPHKTFTFAKLWLAYAYFEIRRLDVSAARK 441
Query: 102 LLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQ 161
+L G+ C + ++ LE + +++ R L+ + +P ++WI W+Q+E
Sbjct: 442 VLGAGIGMCPKPK-LFTGYIELEMRLREFDRVRTLYEKFLTYDPSLSSAWIQWTQVESAV 500
Query: 162 ENNLAARQLFERAVQAS-PKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQ 220
E+ R +FE AVQ S W + FEA G ++ +
Sbjct: 501 EDFERVRAIFELAVQQSLDMPEIVWKAYIDFEAGEGERERAR------------------ 542
Query: 221 SLALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEW----------------KEG 264
NL +L R S H VWI++ ME + G
Sbjct: 543 ------------NLYERLLERTS-----HVKVWISYALMEIATLGGGEDEDGNEIEGEAG 585
Query: 265 NLDTARELYERA---LSIDSTTESAARCLQAWGVLEQRVGN 302
+ D AR+++ER L E A L++W EQ G+
Sbjct: 586 DADLARQVFERGYKDLRAKGEKEDRAVLLESWKSFEQEHGD 626
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 97/226 (42%), Gaps = 10/226 (4%)
Query: 133 ARNLFRQAT-KCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVWGIF 191
A L R+A + P A +E E R FE ++ S + AW + +
Sbjct: 25 AEQLLREAQERQEPAIQAPKQRVQDLEELSEFQARKRTEFESRIRYSRDSILAWTKYAQW 84
Query: 192 EANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDPRHQP 251
EA+ ++ + + + V+PR L +E K N AR LF RA + PR
Sbjct: 85 EASQNEYERSRSVFERALDVDPRSVDLWIKYTDMELKARNINHARNLFDRAITLLPRVDA 144
Query: 252 VWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQRVGNLSAARRLFR 311
+W + ++E N+ AR+++ER + E + Q++ LE+R L A ++
Sbjct: 145 LWYKYVYLEELLLNVSGARQIFERWMQW----EPNDKAWQSYIKLEERYNELDRASAIYE 200
Query: 312 SSLNINSQSYITWMTWAQLEEDQGNSVRAEEIRNLYFQQRTEVVDD 357
+ W+TWA+ EED+G +A E+ FQ E D
Sbjct: 201 RWIACRPIP-KNWVTWAKFEEDRGQPDKAREV----FQTALEFFGD 241
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 81/378 (21%), Positives = 148/378 (39%), Gaps = 51/378 (13%)
Query: 14 YVALGKVLSKQSKVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARELFDAST 73
YV L ++L V+ AR I+ + Q N WQ + LE + + +A +++
Sbjct: 149 YVYLEELLLN---VSGARQIFERWMQWEP--NDKAWQSYIKLEERYNELDRASAIYE-RW 202
Query: 74 VADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNE-------YIYQTLALLEAK 126
+A + W WA E +G KAR++ L+F G E ++ A +E +
Sbjct: 203 IACRPIPKNWVTWAKFEEDRGQPDKAREVFQTALEFFGDEEEQVEKAQSVFAAFARMETR 262
Query: 127 ANRYEQARNLFRQATKCNP--KSCASWIAWSQMEMQQENN-------LAARQL-FERAVQ 176
+E+AR +++ A P KS + + +++ E Q + L R++ +E +
Sbjct: 263 LKEFERARVIYKFALARLPRSKSASLYAQYTKFEKQHGDRAGVELTVLGKRRIQYEEELA 322
Query: 177 ASPKNRFAWHVWGIFEANMGFIDK--GKKLLKI------GHAVNPRDPVL---------- 218
P N AW E + D+ G+ + + AV P L
Sbjct: 323 YDPTNYDAWFSLARLEEDAYRADREDGEDVEPMRVREVYERAVANVPPALEKRYWRRYIY 382
Query: 219 --LQSLALLEYKYSTANLARKLFRRASEIDPRHQ----PVWIAWGWMEWKEGNLDTAREL 272
LQ A E + AR +++ A ++ P +W+A+ + E + ++ AR++
Sbjct: 383 LWLQYAAFEEIDTKDYDRARDVYKAAVKLVPHKTFTFAKLWLAYAYFEIRRLDVSAARKV 442
Query: 273 YERALSIDSTTESAARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEE 332
+ + + + LE R+ R L+ L + W+ W Q+E
Sbjct: 443 LGAGIGMCPKP----KLFTGYIELEMRLREFDRVRTLYEKFLTYDPSLSSAWIQWTQVES 498
Query: 333 DQGNSVRAEEIRNLYFQQ 350
+ R I L QQ
Sbjct: 499 AVEDFERVRAIFELAVQQ 516
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 64/129 (49%), Gaps = 2/129 (1%)
Query: 48 IWQCWAVLENKLGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGL 107
+W + +E K NI AR LFD + A W+ + LE N+ ARQ+ + +
Sbjct: 111 LWIKYTDMELKARNINHARNLFDRAITLLPRVDALWYKYVYLEELLLNVSGARQIFERWM 170
Query: 108 KFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAA 167
++ N+ +Q+ LE + N ++A ++ + C P +W+ W++ E + A
Sbjct: 171 QW-EPNDKAWQSYIKLEERYNELDRASAIYERWIACRP-IPKNWVTWAKFEEDRGQPDKA 228
Query: 168 RQLFERAVQ 176
R++F+ A++
Sbjct: 229 REVFQTALE 237
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 84/204 (41%), Gaps = 17/204 (8%)
Query: 151 WIAWSQME-MQQENNLAARQLFERAVQASPKNRFA----WHVWGIFEANMGFIDKGKKLL 205
W+ ++ E + ++ AR +++ AV+ P F W + FE + +K+L
Sbjct: 384 WLQYAAFEEIDTKDYDRARDVYKAAVKLVPHKTFTFAKLWLAYAYFEIRRLDVSAARKVL 443
Query: 206 KIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGN 265
G + P+ P L LE + + R L+ + DP WI W +E +
Sbjct: 444 GAGIGMCPK-PKLFTGYIELEMRLREFDRVRTLYEKFLTYDPSLSSAWIQWTQVESAVED 502
Query: 266 LDTARELYERALSIDSTTESAARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWM 325
+ R ++E L++ + + +A+ E G AR L+ L S + W+
Sbjct: 503 FERVRAIFE--LAVQQSLDMPEIVWKAYIDFEAGEGERERARNLYERLLERTSHVKV-WI 559
Query: 326 TWAQL--------EEDQGNSVRAE 341
++A + E++ GN + E
Sbjct: 560 SYALMEIATLGGGEDEDGNEIEGE 583
>sp|Q527H0|CLF1_MAGO7 Pre-mRNA-splicing factor CLF1 OS=Magnaporthe oryzae (strain 70-15 /
ATCC MYA-4617 / FGSC 8958) GN=CLF1 PE=3 SV=1
Length = 691
Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 131/296 (44%), Gaps = 19/296 (6%)
Query: 63 GKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLAL 122
G+ R+ F++ ++ W +A EL Q ++R + + L ++
Sbjct: 55 GRKRKEFESYCQRSGFNLKNWLQYAQWELEQKEYARSRSVFERALNLHANKVTLWIRYVE 114
Query: 123 LEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNR 182
E K+ ARNL +A P+ W + +E N RQ+FER ++ P +
Sbjct: 115 AELKSRNINFARNLLDRAVTHLPRVDKLWYKYVWVEEMLGNIPGVRQVFERWMEWQP-DE 173
Query: 183 FAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRA 242
AW + E G D+ +++ V+P +P + E +Y T++ R++F RA
Sbjct: 174 AAWSAFIKLEQRYGEYDRAREIFTRFTMVHP-EPRNWIKWSKFEEEYGTSDRVREVFERA 232
Query: 243 SEIDPRH------QPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCL-QAWGV 295
E ++ + ++IA+ E K +LD AR +Y+ +++ S A L + +
Sbjct: 233 IEELSKYGDEFVEERLFIAYARYEAKLHDLDRARAIYK--FGLENLPRSKAMLLHKEYTT 290
Query: 296 LEQRVGN--------LSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEI 343
E++ G+ LS RR + + N ++Y W +A+LEE G+ R E+
Sbjct: 291 FEKQYGDREGVEDVVLSKRRRHYEDLVRENPKNYDVWFDYARLEEASGDIDRTREV 346
Score = 65.5 bits (158), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 137/328 (41%), Gaps = 35/328 (10%)
Query: 49 WQCWAVLENKLGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLK 108
W + LE + G +ARE+F T+ W W+ E G + R++ + ++
Sbjct: 176 WSAFIKLEQRYGEYDRAREIFTRFTMV-HPEPRNWIKWSKFEEEYGTSDRVREVFERAIE 234
Query: 109 FCG--GNEYIYQTL----ALLEAKANRYEQARNLFRQATKCNPKSCASWI--AWSQMEMQ 160
G+E++ + L A EAK + ++AR +++ + P+S A + ++ E Q
Sbjct: 235 ELSKYGDEFVEERLFIAYARYEAKLHDLDRARAIYKFGLENLPRSKAMLLHKEYTTFEKQ 294
Query: 161 QENNLAA--------RQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVN 212
+ R+ +E V+ +PKN W + E G ID+ +++ + A
Sbjct: 295 YGDREGVEDVVLSKRRRHYEDLVRENPKNYDVWFDYARLEEASGDIDRTREVYEKAIAQV 354
Query: 213 P--------RDPVLLQSLALL--EYKYSTANLARKLFRRASEIDPRHQ----PVWIAWGW 258
P R + L L E + AR+++ ++ P VW+
Sbjct: 355 PPTQAKRHWRRYIYLWIFFALWEETEAKNPERARQVYDTCLKLIPHRTFTFAKVWMHKAH 414
Query: 259 MEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQRVGNLSAARRLFRSSLNINS 318
E ++G+L AR+ RA+ + R + + +EQ++ R L+ + N
Sbjct: 415 FEIRQGDLAAARKTLGRAIGMCPKD----RLFKGYIEMEQKLYEFGRCRILYEKHIAYNP 470
Query: 319 QSYITWMTWAQLEEDQGNSVRAEEIRNL 346
+ TW+ WA+LE + RA I ++
Sbjct: 471 ANCSTWVKWAELERGLDDLDRARAILDM 498
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 79/166 (47%), Gaps = 10/166 (6%)
Query: 47 YIWQCWAVLE-NKLGNIGKARELFDA--STVADKGHIAA--WHGWAVLELRQGNIKKARQ 101
Y+W +A+ E + N +AR+++D + + A W A E+RQG++ AR+
Sbjct: 368 YLWIFFALWEETEAKNPERARQVYDTCLKLIPHRTFTFAKVWMHKAHFEIRQGDLAAARK 427
Query: 102 LLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQ 161
L + + C + +++ +E K + + R L+ + NP +C++W+ W+++E
Sbjct: 428 TLGRAIGMCPKDR-LFKGYIEMEQKLYEFGRCRILYEKHIAYNPANCSTWVKWAELERGL 486
Query: 162 ENNLAARQLFERAVQASP---KNRFAWHVWGIFEANMGFIDKGKKL 204
++ AR + + + A P W + FE G DK + L
Sbjct: 487 DDLDRARAILDMGI-AQPVLDMPEVVWKSYIDFEEEEGEYDKTRSL 531
>sp|Q9BZJ0|CRNL1_HUMAN Crooked neck-like protein 1 OS=Homo sapiens GN=CRNKL1 PE=1 SV=4
Length = 848
Score = 76.3 bits (186), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 133/295 (45%), Gaps = 17/295 (5%)
Query: 64 KARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALL 123
+ R+ F+ + ++ I+ W +A E I++AR + + L N ++ A +
Sbjct: 226 RKRKTFEDNIRKNRTVISNWIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEM 285
Query: 124 EAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRF 183
E K + ARN++ +A P+ W ++ ME N ARQ+FER ++ P+ +
Sbjct: 286 EMKNRQVNHARNIWDRAITTLPRVNQFWYKYTYMEEMLGNVAGARQVFERWMEWQPEEQ- 344
Query: 184 AWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRAS 243
AWH + FE +D+ + + + V+P D A E K++ ARK++ RA
Sbjct: 345 AWHSYINFELRYKEVDRARTIYERFVLVHP-DVKNWIKYARFEEKHAYFAHARKVYERAV 403
Query: 244 EI---DPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQRV 300
E + + +++A+ E + + R +Y+ AL S + A + + + E++
Sbjct: 404 EFFGDEHMDEHLYVAFAKFEENQKEFERVRVIYKYALDRIS-KQDAQELFKNYTIFEKKF 462
Query: 301 GN--------LSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEIRNLY 347
G+ +S R + + N +Y W + +L E + AE +R +Y
Sbjct: 463 GDRRGIEDIIVSKRRFQYEEEVKANPHNYDAWFDYLRLVE---SDAEAEAVREVY 514
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 114/246 (46%), Gaps = 15/246 (6%)
Query: 77 KGHIAAWHGWAVLE-LRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARN 135
K +I W +A+ E L + ++ RQ+ L+ ++ + + +L A+ ++ +
Sbjct: 531 KRYIYLWINYALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWILYAQFEIRQKNLS 590
Query: 136 LFRQATKCNPKSCAS---WIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVWGIFE 192
L R+A + C + + ++E+Q R+L+E+ ++ P+N +W + E
Sbjct: 591 LARRALGTSIGKCPKNKLFKVYIELELQLREFDRCRKLYEKFLEFGPENCTSWIKFAELE 650
Query: 193 ANMGFIDKGKKLLKIGHAVNPR---DPVLLQSLALLEYKYSTANLARKLFRRASEIDPRH 249
+G ID+ + + ++ + PR VL +S E + R L+RR + +H
Sbjct: 651 TILGDIDRARAIYELAIS-QPRLDMPEVLWKSYIDFEIEQEETERTRNLYRRLLQ-RTQH 708
Query: 250 QPVWIAWGWMEW---KEGNLDTARELYERA-LSIDSTTESAAR--CLQAWGVLEQRVGNL 303
VWI++ E KEG+L R++YE A ++ + E R L++W E+ G
Sbjct: 709 VKVWISFAQFELSSGKEGSLTKCRQIYEEANKTMRNCEEKEERLMLLESWRSFEEEFGTA 768
Query: 304 SAARRL 309
S R+
Sbjct: 769 SDKERV 774
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 72/361 (19%), Positives = 135/361 (37%), Gaps = 60/361 (16%)
Query: 10 DGRPYVALGKVLSKQSKVAEARAIYAKG-SQATQGENPYIWQCWAVLENKLGN------- 61
D YVA K Q + R IY + ++ + +++ + + E K G+
Sbjct: 412 DEHLYVAFAKFEENQKEFERVRVIYKYALDRISKQDAQELFKNYTIFEKKFGDRRGIEDI 471
Query: 62 -IGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNE------ 114
+ K R ++ A+ + AW + L + R++ + + +
Sbjct: 472 IVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDAEAEAVREVYERAIANVPPIQEKRHWK 531
Query: 115 ---YIYQTLALLEA-KANRYEQARNLFRQATKCNPKS----CASWIAWSQMEMQQENNLA 166
Y++ AL E +A E+ R +++ + + P WI ++Q E++Q+N
Sbjct: 532 RYIYLWINYALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWILYAQFEIRQKNLSL 591
Query: 167 ARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLE 226
AR+ ++ PKN KL K+ LE
Sbjct: 592 ARRALGTSIGKCPKN---------------------KLFKV--------------YIELE 616
Query: 227 YKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESA 286
+ + RKL+ + E P + WI + +E G++D AR +YE A+S +
Sbjct: 617 LQLREFDRCRKLYEKFLEFGPENCTSWIKFAELETILGDIDRARAIYELAIS-QPRLDMP 675
Query: 287 ARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEIRNL 346
+++ E R L+R L +Q W+++AQ E G + R +
Sbjct: 676 EVLWKSYIDFEIEQEETERTRNLYRRLLQ-RTQHVKVWISFAQFELSSGKEGSLTKCRQI 734
Query: 347 Y 347
Y
Sbjct: 735 Y 735
Score = 49.3 bits (116), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 69/351 (19%), Positives = 142/351 (40%), Gaps = 34/351 (9%)
Query: 27 VAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARELFDASTVADKGHIAAWHGW 86
VA AR ++ + + E W + E + + +AR +++ + + W +
Sbjct: 326 VAGARQVFERWMEWQPEEQA--WHSYINFELRYKEVDRARTIYERFVLVHPD-VKNWIKY 382
Query: 87 AVLELRQGNIKKARQLLAKGLKFCGG---NEYIYQTLALLEAKANRYEQARNLFRQATKC 143
A E + AR++ + ++F G +E++Y A E +E+ R +++ A
Sbjct: 383 ARFEEKHAYFAHARKVYERAVEFFGDEHMDEHLYVAFAKFEENQKEFERVRVIYKYALDR 442
Query: 144 NPKSCASWIAWSQMEMQQ--------ENNLAARQLF--ERAVQASPKNRFAWHVWGIFEA 193
K A + + ++ E+ + +++ F E V+A+P N AW +
Sbjct: 443 ISKQDAQELFKNYTIFEKKFGDRRGIEDIIVSKRRFQYEEEVKANPHNYDAWFDYLRLVE 502
Query: 194 NMGFIDKGKKLLKIGHAVNP---------RDPVLLQSLALLE-YKYSTANLARKLFRRAS 243
+ + +++ + A P R L + AL E + R++++ +
Sbjct: 503 SDAEAEAVREVYERAIANVPPIQEKRHWKRYIYLWINYALYEELEAKDPERTRQVYQASL 562
Query: 244 EIDPRHQ----PVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQR 299
E+ P + +WI + E ++ NL AR RAL + + + LE +
Sbjct: 563 ELIPHKKFTFAKMWILYAQFEIRQKNLSLAR----RALGTSIGKCPKNKLFKVYIELELQ 618
Query: 300 VGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEIRNLYFQQ 350
+ R+L+ L ++ +W+ +A+LE G+ RA I L Q
Sbjct: 619 LREFDRCRKLYEKFLEFGPENCTSWIKFAELETILGDIDRARAIYELAISQ 669
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 76/182 (41%), Gaps = 11/182 (6%)
Query: 165 LAARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLAL 224
L R+ FE ++ + W + +E ++ I + + + + V+ R+ L A
Sbjct: 225 LRKRKTFEDNIRKNRTVISNWIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAE 284
Query: 225 LEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTE 284
+E K N AR ++ RA PR W + +ME GN+ AR+++ER +
Sbjct: 285 MEMKNRQVNHARNIWDRAITTLPRVNQFWYKYTYMEEMLGNVAGARQVFERWMEWQPEE- 343
Query: 285 SAARCLQAWGV---LEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAE 341
QAW E R + AR ++ + ++ W+ +A+ EE A
Sbjct: 344 ------QAWHSYINFELRYKEVDRARTIYERFVLVHP-DVKNWIKYARFEEKHAYFAHAR 396
Query: 342 EI 343
++
Sbjct: 397 KV 398
>sp|Q4WT84|CLF1_ASPFU Pre-mRNA-splicing factor clf1 OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=clf1 PE=3
SV=1
Length = 676
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 110/264 (41%), Gaps = 46/264 (17%)
Query: 124 EAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRF 183
E + + +AR++F +A NP S WI + + EM+ N AR L +RAV P+
Sbjct: 82 ELEQKEFRRARSIFERALDVNPTSVVLWIRYIESEMRNRNINHARNLLDRAVTILPRVDK 141
Query: 184 AWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRAS 243
W+ + E +G I +++ + + P D + LE +Y+ AR +F+R +
Sbjct: 142 FWYKYVYMEETLGNIQGTRQVFERWMSWEP-DEGAWSAYIKLEKRYNEFERARAIFQRFT 200
Query: 244 EIDPRHQPVWIAWGWMEWKEGNLDTAREL------------------------------Y 273
+ P + WI W E + G D RE+ Y
Sbjct: 201 IVHPEPRN-WIKWARFEEEYGTSDLVREVYGMAIETLGEDFMDEKLFIAYAKFEAKLKEY 259
Query: 274 ERALSI-----DSTTESAARCL-QAWGVLEQRVGN--------LSAARRLFRSSLNINSQ 319
ERA +I D S A L +A+ E++ G+ LS R + L N +
Sbjct: 260 ERARAIYKYALDRLPRSKAMALHKAYTTFEKQFGDREGVEDVILSKRRVQYEEQLKENPR 319
Query: 320 SYITWMTWAQLEEDQGNSVRAEEI 343
+Y W +A+LEE G+ R +I
Sbjct: 320 NYDVWFDFARLEETSGDPDRVRDI 343
Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 133/333 (39%), Gaps = 26/333 (7%)
Query: 133 ARNLFRQAT-KCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVWGIF 191
A L R+A + P A ++ +E E R+ FE V+ + N W + +
Sbjct: 22 AEQLLREAVDRQEPALQAPTQRFADLEELHEYQGRKRKEFEDYVRRNRLNMNNWMRYASW 81
Query: 192 EANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDPRHQP 251
E + + + + VNP VL E + N AR L RA I PR
Sbjct: 82 ELEQKEFRRARSIFERALDVNPTSVVLWIRYIESEMRNRNINHARNLLDRAVTILPRVDK 141
Query: 252 VWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQRVGNLSAARRLFR 311
W + +ME GN+ R+++ER +S E A+ LE+R AR +F+
Sbjct: 142 FWYKYVYMEETLGNIQGTRQVFERWMS----WEPDEGAWSAYIKLEKRYNEFERARAIFQ 197
Query: 312 SSLNINSQSYITWMTWAQLEEDQGNSVRAEEIRNLYFQQRTEVVDDASWVMGFMD----- 366
++ + W+ WA+ EE+ G S E+ + + E D + +
Sbjct: 198 RFTIVHPEPR-NWIKWARFEEEYGTSDLVREVYGMAIETLGEDFMDEKLFIAYAKFEAKL 256
Query: 367 --------IIDPALDRI--KQLLNLEKSSYKEPSAYSPGDNESTDDEASVSRYSGLYVGN 416
I ALDR+ + + L K+ + GD E +D +S+ Y
Sbjct: 257 KEYERARAIYKYALDRLPRSKAMALHKAYTTFEKQF--GDREGVED-VILSKRRVQYEEQ 313
Query: 417 DLESASGFDL-DDFIR-NKLNLDPDQLDVLLEK 447
E+ +D+ DF R + + DPD++ + E+
Sbjct: 314 LKENPRNYDVWFDFARLEETSGDPDRVRDIYER 346
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 73/359 (20%), Positives = 149/359 (41%), Gaps = 35/359 (9%)
Query: 49 WQCWAVLENKLGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLK 108
W + LE + +AR +F T+ W WA E G R++ ++
Sbjct: 176 WSAYIKLEKRYNEFERARAIFQRFTIV-HPEPRNWIKWARFEEEYGTSDLVREVYGMAIE 234
Query: 109 FCGGN---EYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWI--AWSQMEMQ--- 160
G + E ++ A EAK YE+AR +++ A P+S A + A++ E Q
Sbjct: 235 TLGEDFMDEKLFIAYAKFEAKLKEYERARAIYKYALDRLPRSKAMALHKAYTTFEKQFGD 294
Query: 161 ----QENNLAARQL-FERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNP-- 213
++ L+ R++ +E ++ +P+N W + E G D+ + + + A P
Sbjct: 295 REGVEDVILSKRRVQYEEQLKENPRNYDVWFDFARLEETSGDPDRVRDIYERAIAQIPPS 354
Query: 214 ------RDPVLLQSLALL--EYKYSTANLARKLFRRASEIDPRHQ----PVWIAWGWMEW 261
R + L + E + + AR+++ ++ P + +W+ +
Sbjct: 355 QEKRHWRRYIYLWIFYAIWEEMEAKDVDRARQIYTECLKLIPHKKFTFAKIWLLKAQFDI 414
Query: 262 KEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSY 321
++ +L AR+ +A+ + + + + LE+++ R L+ + N +
Sbjct: 415 RQMDLQAARKTLGQAIGMCPKD----KLFRGYIDLERQLFEFVRCRTLYEKQIEWNPANS 470
Query: 322 ITWMTWAQLEEDQGNSVRAEEIRNLYFQQRTEVVDDASWVMGFMDI--IDPALDRIKQL 378
+W+ +A+LE +S RA I L Q + + W ++D + DR++QL
Sbjct: 471 QSWIKYAELERGLDDSERARAIFELGIDQPMLDMPELVW-KAYIDFEEYEGEYDRVRQL 528
Score = 49.7 bits (117), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 81/165 (49%), Gaps = 8/165 (4%)
Query: 47 YIWQCWAVLEN-KLGNIGKARELFDA--STVADKGHIAA--WHGWAVLELRQGNIKKARQ 101
Y+W +A+ E + ++ +AR+++ + K A W A ++RQ +++ AR+
Sbjct: 365 YLWIFYAIWEEMEAKDVDRARQIYTECLKLIPHKKFTFAKIWLLKAQFDIRQMDLQAARK 424
Query: 102 LLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQ 161
L + + C ++ +++ LE + + + R L+ + + NP + SWI ++++E
Sbjct: 425 TLGQAIGMCPKDK-LFRGYIDLERQLFEFVRCRTLYEKQIEWNPANSQSWIKYAELERGL 483
Query: 162 ENNLAARQLFERAVQASPKN--RFAWHVWGIFEANMGFIDKGKKL 204
+++ AR +FE + + W + FE G D+ ++L
Sbjct: 484 DDSERARAIFELGIDQPMLDMPELVWKAYIDFEEYEGEYDRVRQL 528
Score = 45.8 bits (107), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 63/303 (20%), Positives = 118/303 (38%), Gaps = 44/303 (14%)
Query: 10 DGRPYVALGKVLSKQSKVAEARAIYAKG-SQATQGENPYIWQCWAVLENKLGN------- 61
D + ++A K +K + ARAIY + + + + + + E + G+
Sbjct: 242 DEKLFIAYAKFEAKLKEYERARAIYKYALDRLPRSKAMALHKAYTTFEKQFGDREGVEDV 301
Query: 62 -IGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNE------ 114
+ K R ++ + + W +A LE G+ + R + + + ++
Sbjct: 302 ILSKRRVQYEEQLKENPRNYDVWFDFARLEETSGDPDRVRDIYERAIAQIPPSQEKRHWR 361
Query: 115 -YIYQTLALL---EAKANRYEQARNLFRQATKCNPKSCAS----WIAWSQMEMQQENNLA 166
YIY + E +A ++AR ++ + K P + W+ +Q +++Q + A
Sbjct: 362 RYIYLWIFYAIWEEMEAKDVDRARQIYTECLKLIPHKKFTFAKIWLLKAQFDIRQMDLQA 421
Query: 167 ARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAV---------NPRDPV 217
AR+ +A+ PK++ G+ID ++L + NP +
Sbjct: 422 ARKTLGQAIGMCPKDKLF----------RGYIDLERQLFEFVRCRTLYEKQIEWNPANSQ 471
Query: 218 LLQSLALLEYKYSTANLARKLFRRASEIDPRHQP--VWIAWGWMEWKEGNLDTARELYER 275
A LE + AR +F + P VW A+ E EG D R+LYER
Sbjct: 472 SWIKYAELERGLDDSERARAIFELGIDQPMLDMPELVWKAYIDFEEYEGEYDRVRQLYER 531
Query: 276 ALS 278
L
Sbjct: 532 LLQ 534
>sp|P63155|CRNL1_RAT Crooked neck-like protein 1 OS=Rattus norvegicus GN=Crnkl1 PE=2
SV=1
Length = 690
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 133/295 (45%), Gaps = 17/295 (5%)
Query: 64 KARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALL 123
+ R+ F+ + ++ I+ W +A E I++AR + + L N ++ A +
Sbjct: 65 RKRKTFEDNIRKNRTVISNWIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEM 124
Query: 124 EAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRF 183
E K + ARN++ +A P+ W ++ ME N ARQ+FER ++ P+ +
Sbjct: 125 EMKNRQVNHARNIWDRAITTLPRVNQFWYKYTYMEEMLGNVAGARQVFERWMEWQPEEQ- 183
Query: 184 AWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRAS 243
AWH + FE +++ + + + V+P ++ A E K++ ARK++ RA
Sbjct: 184 AWHSYINFELRYKEVERARTIYERFVLVHPAVKNWIK-YARFEEKHAYFAHARKVYERAV 242
Query: 244 EI---DPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQRV 300
E + + +++A+ E + + R +Y+ AL S E A + + + E++
Sbjct: 243 EFFGDEHMDEHLYVAFAKFEENQKEFERVRVIYKYALDRISKQE-AQELFKNYTIFEKKF 301
Query: 301 GN--------LSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEIRNLY 347
G+ +S R + + N +Y W + +L E A+ +R +Y
Sbjct: 302 GDRRGIEDIIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDAE---ADTVREVY 353
Score = 65.5 bits (158), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 123/274 (44%), Gaps = 45/274 (16%)
Query: 47 YIWQCWAVLEN-KLGNIGKARELFDAST--VADKGHIAA--WHGWAVLELRQGNIKKARQ 101
Y+W +A+ E + + + R+++ AS + K A W +A E+RQ N+ AR+
Sbjct: 374 YLWVNYALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWLYYAQFEIRQKNLPFARR 433
Query: 102 LLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQ 161
L + C N+ +++ LE + +++ R L+ + + P++C SWI ++++E
Sbjct: 434 ALGTSIGKCPKNK-LFKGYIELELQLREFDRCRKLYEKFLEFGPENCTSWIKFAELETIL 492
Query: 162 ENNLAARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQS 221
+ AR ++E A+ + P+ +W +ID +I R
Sbjct: 493 GDIERARAIYELAI-SQPRLDMPEVLWK------SYID-----FEIEQEETER------- 533
Query: 222 LALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEW---KEGNLDTARELYERA-L 277
T NL R+L +R +H VWI++ E KEG++ R++YE A
Sbjct: 534 ---------TRNLYRQLLQRT-----QHVKVWISFAQFELSSGKEGSVAKCRQIYEEANK 579
Query: 278 SIDSTTESAAR--CLQAWGVLEQRVGNLSAARRL 309
++ + E R L++W E G +S R+
Sbjct: 580 TMRNCEEKEERLMLLESWRSFEDEFGTVSDKERV 613
Score = 62.4 bits (150), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 68/336 (20%), Positives = 144/336 (42%), Gaps = 27/336 (8%)
Query: 25 SKVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARELFDASTVADKGHIAAWH 84
++ AR+IY + N +W +A +E K + AR ++D + W+
Sbjct: 95 KEIQRARSIYERALD-VDYRNITLWLKYAEMEMKNRQVNHARNIWDRAITTLPRVNQFWY 153
Query: 85 GWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCN 144
+ +E GN+ ARQ+ + +++ E + + E + E+AR ++ + +
Sbjct: 154 KYTYMEEMLGNVAGARQVFERWMEW-QPEEQAWHSYINFELRYKEVERARTIYERFVLVH 212
Query: 145 PKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVW---GIFEANMGFIDKG 201
P + +WI +++ E + AR+++ERAV+ H++ FE N ++
Sbjct: 213 P-AVKNWIKYARFEEKHAYFAHARKVYERAVEFFGDEHMDEHLYVAFAKFEENQKEFERV 271
Query: 202 KKLLK--IGHAVNPRDPVLLQSLALLEYKYSTAN------LARKLFRRASEI--DPRHQP 251
+ + K + L ++ + E K+ ++++ F+ E+ +P +
Sbjct: 272 RVIYKYALDRISKQEAQELFKNYTIFEKKFGDRRGIEDIIVSKRRFQYEEEVKANPHNYD 331
Query: 252 VWIAWGWMEWKEGNLDTARELYERALS-IDSTTESA--ARCLQAW---GVLEQ-RVGNLS 304
W + + + DT RE+YERA++ + E R + W + E+ +
Sbjct: 332 AWFDYLRLVESDAEADTVREVYERAIANVPPIQEKRHWKRYIYLWVNYALYEELEAKDPE 391
Query: 305 AARRLFRSSLNINSQSYIT----WMTWAQLEEDQGN 336
R+++++SL + T W+ +AQ E Q N
Sbjct: 392 RTRQVYQASLELIPHKKFTFAKMWLYYAQFEIRQKN 427
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 71/361 (19%), Positives = 138/361 (38%), Gaps = 60/361 (16%)
Query: 10 DGRPYVALGKVLSKQSKVAEARAIYAKG-SQATQGENPYIWQCWAVLENKLGN------- 61
D YVA K Q + R IY + ++ E +++ + + E K G+
Sbjct: 251 DEHLYVAFAKFEENQKEFERVRVIYKYALDRISKQEAQELFKNYTIFEKKFGDRRGIEDI 310
Query: 62 -IGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNE------ 114
+ K R ++ A+ + AW + L R++ + + +
Sbjct: 311 IVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDAEADTVREVYERAIANVPPIQEKRHWK 370
Query: 115 ---YIYQTLALLEA-KANRYEQARNLFRQATKCNPKS----CASWIAWSQMEMQQENNLA 166
Y++ AL E +A E+ R +++ + + P W+ ++Q E++Q+N
Sbjct: 371 RYIYLWVNYALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWLYYAQFEIRQKNLPF 430
Query: 167 ARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLE 226
AR+ ++ PKN+ +F+ G+I+ LE
Sbjct: 431 ARRALGTSIGKCPKNK-------LFK---GYIE-------------------------LE 455
Query: 227 YKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESA 286
+ + RKL+ + E P + WI + +E G+++ AR +YE A+S +
Sbjct: 456 LQLREFDRCRKLYEKFLEFGPENCTSWIKFAELETILGDIERARAIYELAIS-QPRLDMP 514
Query: 287 ARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEIRNL 346
+++ E R L+R L +Q W+++AQ E G + R +
Sbjct: 515 EVLWKSYIDFEIEQEETERTRNLYRQLLQ-RTQHVKVWISFAQFELSSGKEGSVAKCRQI 573
Query: 347 Y 347
Y
Sbjct: 574 Y 574
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 69/351 (19%), Positives = 142/351 (40%), Gaps = 34/351 (9%)
Query: 27 VAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARELFDASTVADKGHIAAWHGW 86
VA AR ++ + + E W + E + + +AR +++ + + W +
Sbjct: 165 VAGARQVFERWMEWQPEEQA--WHSYINFELRYKEVERARTIYERFVLVHPA-VKNWIKY 221
Query: 87 AVLELRQGNIKKARQLLAKGLKFCGG---NEYIYQTLALLEAKANRYEQARNLFRQATKC 143
A E + AR++ + ++F G +E++Y A E +E+ R +++ A
Sbjct: 222 ARFEEKHAYFAHARKVYERAVEFFGDEHMDEHLYVAFAKFEENQKEFERVRVIYKYALDR 281
Query: 144 NPKSCASWIAWSQMEMQQ--------ENNLAARQLF--ERAVQASPKNRFAWHVWGIFEA 193
K A + + ++ E+ + +++ F E V+A+P N AW +
Sbjct: 282 ISKQEAQELFKNYTIFEKKFGDRRGIEDIIVSKRRFQYEEEVKANPHNYDAWFDYLRLVE 341
Query: 194 NMGFIDKGKKLLKIGHAVNP---------RDPVLLQSLALLE-YKYSTANLARKLFRRAS 243
+ D +++ + A P R L + AL E + R++++ +
Sbjct: 342 SDAEADTVREVYERAIANVPPIQEKRHWKRYIYLWVNYALYEELEAKDPERTRQVYQASL 401
Query: 244 EIDPRHQ----PVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQR 299
E+ P + +W+ + E ++ NL AR RAL + + + LE +
Sbjct: 402 ELIPHKKFTFAKMWLYYAQFEIRQKNLPFAR----RALGTSIGKCPKNKLFKGYIELELQ 457
Query: 300 VGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEIRNLYFQQ 350
+ R+L+ L ++ +W+ +A+LE G+ RA I L Q
Sbjct: 458 LREFDRCRKLYEKFLEFGPENCTSWIKFAELETILGDIERARAIYELAISQ 508
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 77/182 (42%), Gaps = 11/182 (6%)
Query: 165 LAARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLAL 224
L R+ FE ++ + W + +E ++ I + + + + V+ R+ L A
Sbjct: 64 LRKRKTFEDNIRKNRTVISNWIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAE 123
Query: 225 LEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTE 284
+E K N AR ++ RA PR W + +ME GN+ AR+++ER +
Sbjct: 124 MEMKNRQVNHARNIWDRAITTLPRVNQFWYKYTYMEEMLGNVAGARQVFERWMEWQPEE- 182
Query: 285 SAARCLQAWGV---LEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAE 341
QAW E R + AR ++ + ++ + W+ +A+ EE A
Sbjct: 183 ------QAWHSYINFELRYKEVERARTIYERFVLVHP-AVKNWIKYARFEEKHAYFAHAR 235
Query: 342 EI 343
++
Sbjct: 236 KV 237
>sp|P63154|CRNL1_MOUSE Crooked neck-like protein 1 OS=Mus musculus GN=Crnkl1 PE=2 SV=1
Length = 690
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 133/295 (45%), Gaps = 17/295 (5%)
Query: 64 KARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALL 123
+ R+ F+ + ++ I+ W +A E I++AR + + L N ++ A +
Sbjct: 65 RKRKTFEDNIRKNRTVISNWIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAEM 124
Query: 124 EAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRF 183
E K + ARN++ +A P+ W ++ ME N ARQ+FER ++ P+ +
Sbjct: 125 EMKNRQVNHARNIWDRAITTLPRVNQFWYKYTYMEEMLGNVAGARQVFERWMEWQPEEQ- 183
Query: 184 AWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRAS 243
AWH + FE +++ + + + V+P ++ A E K++ ARK++ RA
Sbjct: 184 AWHSYINFELRYKEVERARTIYERFVLVHPAVKNWIK-YARFEEKHAYFAHARKVYERAV 242
Query: 244 EI---DPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQRV 300
E + + +++A+ E + + R +Y+ AL S E A + + + E++
Sbjct: 243 EFFGDEHMDEHLYVAFAKFEENQKEFERVRVIYKYALDRISKQE-AQELFKNYTIFEKKF 301
Query: 301 GN--------LSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEIRNLY 347
G+ +S R + + N +Y W + +L E A+ +R +Y
Sbjct: 302 GDRRGIEDIIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDAE---ADTVREVY 353
Score = 65.5 bits (158), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 123/274 (44%), Gaps = 45/274 (16%)
Query: 47 YIWQCWAVLEN-KLGNIGKARELFDAST--VADKGHIAA--WHGWAVLELRQGNIKKARQ 101
Y+W +A+ E + + + R+++ AS + K A W +A E+RQ N+ AR+
Sbjct: 374 YLWVNYALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWLYYAQFEIRQKNLPFARR 433
Query: 102 LLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQ 161
L + C N+ +++ LE + +++ R L+ + + P++C SWI ++++E
Sbjct: 434 ALGTSIGKCPKNK-LFKGYIELELQLREFDRCRKLYEKFLEFGPENCTSWIKFAELETIL 492
Query: 162 ENNLAARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQS 221
+ AR ++E A+ + P+ +W +ID +I R
Sbjct: 493 GDIERARAIYELAI-SQPRLDMPEVLWK------SYID-----FEIEQEETER------- 533
Query: 222 LALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEW---KEGNLDTARELYERA-L 277
T NL R+L +R +H VWI++ E KEG++ R++YE A
Sbjct: 534 ---------TRNLYRQLLQRT-----QHVKVWISFAQFELSSGKEGSVAKCRQIYEEANK 579
Query: 278 SIDSTTESAAR--CLQAWGVLEQRVGNLSAARRL 309
++ + E R L++W E G +S R+
Sbjct: 580 TMRNCEEKEERLMLLESWRSFEDEFGTVSDKERV 613
Score = 62.4 bits (150), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 68/336 (20%), Positives = 144/336 (42%), Gaps = 27/336 (8%)
Query: 25 SKVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARELFDASTVADKGHIAAWH 84
++ AR+IY + N +W +A +E K + AR ++D + W+
Sbjct: 95 KEIQRARSIYERALD-VDYRNITLWLKYAEMEMKNRQVNHARNIWDRAITTLPRVNQFWY 153
Query: 85 GWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCN 144
+ +E GN+ ARQ+ + +++ E + + E + E+AR ++ + +
Sbjct: 154 KYTYMEEMLGNVAGARQVFERWMEW-QPEEQAWHSYINFELRYKEVERARTIYERFVLVH 212
Query: 145 PKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVW---GIFEANMGFIDKG 201
P + +WI +++ E + AR+++ERAV+ H++ FE N ++
Sbjct: 213 P-AVKNWIKYARFEEKHAYFAHARKVYERAVEFFGDEHMDEHLYVAFAKFEENQKEFERV 271
Query: 202 KKLLK--IGHAVNPRDPVLLQSLALLEYKYSTAN------LARKLFRRASEI--DPRHQP 251
+ + K + L ++ + E K+ ++++ F+ E+ +P +
Sbjct: 272 RVIYKYALDRISKQEAQELFKNYTIFEKKFGDRRGIEDIIVSKRRFQYEEEVKANPHNYD 331
Query: 252 VWIAWGWMEWKEGNLDTARELYERALS-IDSTTESA--ARCLQAW---GVLEQ-RVGNLS 304
W + + + DT RE+YERA++ + E R + W + E+ +
Sbjct: 332 AWFDYLRLVESDAEADTVREVYERAIANVPPIQEKRHWKRYIYLWVNYALYEELEAKDPE 391
Query: 305 AARRLFRSSLNINSQSYIT----WMTWAQLEEDQGN 336
R+++++SL + T W+ +AQ E Q N
Sbjct: 392 RTRQVYQASLELIPHKKFTFAKMWLYYAQFEIRQKN 427
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 71/361 (19%), Positives = 138/361 (38%), Gaps = 60/361 (16%)
Query: 10 DGRPYVALGKVLSKQSKVAEARAIYAKG-SQATQGENPYIWQCWAVLENKLGN------- 61
D YVA K Q + R IY + ++ E +++ + + E K G+
Sbjct: 251 DEHLYVAFAKFEENQKEFERVRVIYKYALDRISKQEAQELFKNYTIFEKKFGDRRGIEDI 310
Query: 62 -IGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNE------ 114
+ K R ++ A+ + AW + L R++ + + +
Sbjct: 311 IVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDAEADTVREVYERAIANVPPIQEKRHWK 370
Query: 115 ---YIYQTLALLEA-KANRYEQARNLFRQATKCNPKS----CASWIAWSQMEMQQENNLA 166
Y++ AL E +A E+ R +++ + + P W+ ++Q E++Q+N
Sbjct: 371 RYIYLWVNYALYEELEAKDPERTRQVYQASLELIPHKKFTFAKMWLYYAQFEIRQKNLPF 430
Query: 167 ARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLE 226
AR+ ++ PKN+ +F+ G+I+ LE
Sbjct: 431 ARRALGTSIGKCPKNK-------LFK---GYIE-------------------------LE 455
Query: 227 YKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESA 286
+ + RKL+ + E P + WI + +E G+++ AR +YE A+S +
Sbjct: 456 LQLREFDRCRKLYEKFLEFGPENCTSWIKFAELETILGDIERARAIYELAIS-QPRLDMP 514
Query: 287 ARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEIRNL 346
+++ E R L+R L +Q W+++AQ E G + R +
Sbjct: 515 EVLWKSYIDFEIEQEETERTRNLYRQLLQ-RTQHVKVWISFAQFELSSGKEGSVAKCRQI 573
Query: 347 Y 347
Y
Sbjct: 574 Y 574
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 69/351 (19%), Positives = 142/351 (40%), Gaps = 34/351 (9%)
Query: 27 VAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARELFDASTVADKGHIAAWHGW 86
VA AR ++ + + E W + E + + +AR +++ + + W +
Sbjct: 165 VAGARQVFERWMEWQPEEQA--WHSYINFELRYKEVERARTIYERFVLVHPA-VKNWIKY 221
Query: 87 AVLELRQGNIKKARQLLAKGLKFCGG---NEYIYQTLALLEAKANRYEQARNLFRQATKC 143
A E + AR++ + ++F G +E++Y A E +E+ R +++ A
Sbjct: 222 ARFEEKHAYFAHARKVYERAVEFFGDEHMDEHLYVAFAKFEENQKEFERVRVIYKYALDR 281
Query: 144 NPKSCASWIAWSQMEMQQ--------ENNLAARQLF--ERAVQASPKNRFAWHVWGIFEA 193
K A + + ++ E+ + +++ F E V+A+P N AW +
Sbjct: 282 ISKQEAQELFKNYTIFEKKFGDRRGIEDIIVSKRRFQYEEEVKANPHNYDAWFDYLRLVE 341
Query: 194 NMGFIDKGKKLLKIGHAVNP---------RDPVLLQSLALLE-YKYSTANLARKLFRRAS 243
+ D +++ + A P R L + AL E + R++++ +
Sbjct: 342 SDAEADTVREVYERAIANVPPIQEKRHWKRYIYLWVNYALYEELEAKDPERTRQVYQASL 401
Query: 244 EIDPRHQ----PVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQR 299
E+ P + +W+ + E ++ NL AR RAL + + + LE +
Sbjct: 402 ELIPHKKFTFAKMWLYYAQFEIRQKNLPFAR----RALGTSIGKCPKNKLFKGYIELELQ 457
Query: 300 VGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEIRNLYFQQ 350
+ R+L+ L ++ +W+ +A+LE G+ RA I L Q
Sbjct: 458 LREFDRCRKLYEKFLEFGPENCTSWIKFAELETILGDIERARAIYELAISQ 508
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 77/182 (42%), Gaps = 11/182 (6%)
Query: 165 LAARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLAL 224
L R+ FE ++ + W + +E ++ I + + + + V+ R+ L A
Sbjct: 64 LRKRKTFEDNIRKNRTVISNWIKYAQWEESLKEIQRARSIYERALDVDYRNITLWLKYAE 123
Query: 225 LEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTE 284
+E K N AR ++ RA PR W + +ME GN+ AR+++ER +
Sbjct: 124 MEMKNRQVNHARNIWDRAITTLPRVNQFWYKYTYMEEMLGNVAGARQVFERWMEWQPEE- 182
Query: 285 SAARCLQAWGV---LEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAE 341
QAW E R + AR ++ + ++ + W+ +A+ EE A
Sbjct: 183 ------QAWHSYINFELRYKEVERARTIYERFVLVHP-AVKNWIKYARFEEKHAYFAHAR 235
Query: 342 EI 343
++
Sbjct: 236 KV 237
>sp|Q6C186|CLF1_YARLI Pre-mRNA-splicing factor CLF1 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=CLF1 PE=3 SV=1
Length = 676
Score = 72.4 bits (176), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 106/245 (43%), Gaps = 19/245 (7%)
Query: 124 EAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRF 183
E + + +AR++F +A + N +WI + Q E++++N AR L +RAV P+
Sbjct: 76 ELEQREFARARSVFERALEVNSTHVPTWIRYIQCELKEKNINHARNLLDRAVTLLPRVDK 135
Query: 184 AWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLAL-LEYKYSTANLARKLFRRA 242
W + E +G I + + + ++ R PV + + +E +Y + AR + RR
Sbjct: 136 LWFTYVATEETLGNIAGCRAVFE--RWMHWRPPVTAWAAYVNMEKRYREFDRARGILRRY 193
Query: 243 SEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESA--------ARCLQAWG 294
+ P P W W E + GN DT RE+Y AL ID+ E A L W
Sbjct: 194 VTVHP-GAPAWNKWAKFEMEAGNRDTVREVY--ALGIDTLVEMAHGGVDFLDESLLAGWA 250
Query: 295 VLEQRVGNLSAARRLFRSSLN--INSQSYITWMTWAQLEEDQGNSVRAEEIRNLYFQQRT 352
E R AR L+ L S+S + + E+ G E I N+ +R
Sbjct: 251 SFETRHREYERARALYTYGLEKLPKSKSAKLYADYTAFEKQYGAK---EGIENVVLTKRR 307
Query: 353 EVVDD 357
+D
Sbjct: 308 SKYED 312
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 75/147 (51%), Gaps = 7/147 (4%)
Query: 49 WQCWAVLENKLGNIGKARELFDA--STVADKGHIAA--WHGWAVLELRQGNIKKARQLLA 104
+ W LENK + KARE++ S + K A W WA E+R GN+ +AR++L
Sbjct: 370 YAIWEELENK--EVEKAREIYKTCISIIPHKKFTFAKVWLLWAKFEIRHGNLPEARKILG 427
Query: 105 KGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENN 164
+GL GG +Y+ LEAK +++ R L+ + + + A W+ ++++E +
Sbjct: 428 RGLGMSGGKPALYKGYIALEAKLREFDRCRKLYDKYVEKFAEFAAPWMEYAELEQMLGDE 487
Query: 165 LAARQLFERAVQASPKNRFAWHVWGIF 191
AR +FE AV + P+ VW F
Sbjct: 488 ERARAIFELAV-SQPEMEMPELVWKRF 513
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/335 (22%), Positives = 136/335 (40%), Gaps = 37/335 (11%)
Query: 49 WQCWAVLENKLGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLK 108
W + +E + +AR + G AW+ WA E+ GN R++ A G+
Sbjct: 170 WAAYVNMEKRYREFDRARGILRRYVTVHPG-APAWNKWAKFEMEAGNRDTVREVYALGID 228
Query: 109 FC-----GGNEYIYQTL----ALLEAKANRYEQARNLFRQATKCNPKSCAS--WIAWSQM 157
GG +++ ++L A E + YE+AR L+ + PKS ++ + ++
Sbjct: 229 TLVEMAHGGVDFLDESLLAGWASFETRHREYERARALYTYGLEKLPKSKSAKLYADYTAF 288
Query: 158 EMQQ------ENNLAA--RQLFERAVQASPKNRFAWHVWGIFEANMGF-IDKGKKLLKIG 208
E Q EN + R +E ++ P + W + G D+ +++ +
Sbjct: 289 EKQYGAKEGIENVVLTKRRSKYEDQLKEDPADYDTWFSYITLGQESGLEADQIREIFERA 348
Query: 209 HA-VNPRDPVLLQSLALLEYKYST--------ANLARKLFRRASEIDPRHQ----PVWIA 255
+ V P L + L KY+ AR++++ I P + VW+
Sbjct: 349 VSNVPPHSKRLWRRYIFLWIKYAIWEELENKEVEKAREIYKTCISIIPHKKFTFAKVWLL 408
Query: 256 WGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQRVGNLSAARRLFRSSLN 315
W E + GNL AR++ R L + + + + LE ++ R+L+ +
Sbjct: 409 WAKFEIRHGNLPEARKILGRGLGMSGGKPA---LYKGYIALEAKLREFDRCRKLYDKYVE 465
Query: 316 INSQSYITWMTWAQLEEDQGNSVRAEEIRNLYFQQ 350
++ WM +A+LE+ G+ RA I L Q
Sbjct: 466 KFAEFAAPWMEYAELEQMLGDEERARAIFELAVSQ 500
Score = 58.9 bits (141), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 76/354 (21%), Positives = 126/354 (35%), Gaps = 76/354 (21%)
Query: 49 WQCWAVLENKLGNIGKARELF--DASTVADKGHIAA-------WHGWAVLELRQGNIKKA 99
W WA E + GN RE++ T+ + H GWA E R ++A
Sbjct: 203 WNKWAKFEMEAGNRDTVREVYALGIDTLVEMAHGGVDFLDESLLAGWASFETRHREYERA 262
Query: 100 RQLLAKGL-------------------KFCGGNEYIYQTLALLEAKANRYE--------- 131
R L GL K G E I + L + ++YE
Sbjct: 263 RALYTYGLEKLPKSKSAKLYADYTAFEKQYGAKEGIENVV--LTKRRSKYEDQLKEDPAD 320
Query: 132 -------------------QARNLFRQATKCNPKSCAS--------WIA---WSQMEMQQ 161
Q R +F +A P WI W ++E ++
Sbjct: 321 YDTWFSYITLGQESGLEADQIREIFERAVSNVPPHSKRLWRRYIFLWIKYAIWEELENKE 380
Query: 162 ENNLAARQLFERAVQASPKNRFA----WHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPV 217
AR++++ + P +F W +W FE G + + +K+L G ++ P
Sbjct: 381 VEK--AREIYKTCISIIPHKKFTFAKVWLLWAKFEIRHGNLPEARKILGRGLGMSGGKPA 438
Query: 218 LLQSLALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERAL 277
L + LE K + RKL+ + E W+ + +E G+ + AR ++E A+
Sbjct: 439 LYKGYIALEAKLREFDRCRKLYDKYVEKFAEFAAPWMEYAELEQMLGDEERARAIFELAV 498
Query: 278 SIDSTTESAARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLE 331
S E + + E N AR ++R L+ W+++AQ E
Sbjct: 499 S-QPEMEMPELVWKRFIEFEAEEENYDRARAIYRQLLDRTHGHIKVWISFAQFE 551
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/307 (20%), Positives = 116/307 (37%), Gaps = 38/307 (12%)
Query: 49 WQCWAVLENKLGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLK 108
W +A E + +AR +F+ + + H+ W + EL++ NI AR LL + +
Sbjct: 69 WMRYAQWELEQREFARARSVFERALEVNSTHVPTWIRYIQCELKEKNINHARNLLDRAVT 128
Query: 109 FCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAAR 168
+ ++ T E R +F + P A W A+ ME + AR
Sbjct: 129 LLPRVDKLWFTYVATEETLGNIAGCRAVFERWMHWRPPVTA-WAAYVNMEKRYREFDRAR 187
Query: 169 QLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYK 228
+ R V P AW+ W FE G D +++ +G + +L + +
Sbjct: 188 GILRRYVTVHP-GAPAWNKWAKFEMEAGNRDTVREVYALG----------IDTLVEMAH- 235
Query: 229 YSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAAR 288
+D + + W E + + AR LY L ++S A+
Sbjct: 236 --------------GGVDFLDESLLAGWASFETRHREYERARALYTYGLEKLPKSKS-AK 280
Query: 289 CLQAWGVLEQRVGN--------LSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRA 340
+ E++ G L+ R + L + Y TW ++ L ++ G + A
Sbjct: 281 LYADYTAFEKQYGAKEGIENVVLTKRRSKYEDQLKEDPADYDTWFSYITLGQESG--LEA 338
Query: 341 EEIRNLY 347
++IR ++
Sbjct: 339 DQIREIF 345
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 70/163 (42%), Gaps = 7/163 (4%)
Query: 3 CIDYWPEDGRPYVAL----GKVLSKQSKVAEARAIYAKGSQATQGENPYIWQCWAVLENK 58
CI P + + K + + EAR I +G + G P +++ + LE K
Sbjct: 391 CISIIPHKKFTFAKVWLLWAKFEIRHGNLPEARKILGRGLGMSGG-KPALYKGYIALEAK 449
Query: 59 LGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQL--LAKGLKFCGGNEYI 116
L + R+L+D A W +A LE G+ ++AR + LA E +
Sbjct: 450 LREFDRCRKLYDKYVEKFAEFAAPWMEYAELEQMLGDEERARAIFELAVSQPEMEMPELV 509
Query: 117 YQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEM 159
++ EA+ Y++AR ++RQ WI+++Q E+
Sbjct: 510 WKRFIEFEAEEENYDRARAIYRQLLDRTHGHIKVWISFAQFEV 552
>sp|P17886|CRN_DROME Protein crooked neck OS=Drosophila melanogaster GN=crn PE=2 SV=2
Length = 702
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 137/298 (45%), Gaps = 23/298 (7%)
Query: 64 KARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALL 123
+ R+ F+ + ++ ++ W +A E +Q I++AR + + L N ++ A +
Sbjct: 60 RKRKTFEDNLRKNRMVVSHWIKYAQWEEQQQEIQRARSIWERALDNEHRNVTLWLKYAEM 119
Query: 124 EAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRF 183
E K + ARNL+ +A P+ W ++ ME EN ARQ+FER ++ P+ +
Sbjct: 120 EMKNKQVNHARNLWDRAVTIMPRVNQFWYKYTYMEEMLENVAGARQVFERWMEWQPEEQ- 178
Query: 184 AWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRAS 243
AW + FE ID+ +++ + V+P D A E + + +R++F RA
Sbjct: 179 AWQTYVNFELRYKEIDRAREIYERFVYVHP-DVKNWIKFARFEESHGFIHGSRRVFERAV 237
Query: 244 EI---DPRHQPVWIAWGWMEWKEGNLDTARELYERALSI---DSTTESAARCLQAWGVLE 297
E D + ++IA+ E + D AR +Y+ AL D T E +A+ E
Sbjct: 238 EFFGDDYIEERLFIAFARFEEGQKEHDRARIIYKYALDHLPKDRTQE----LFKAYTKHE 293
Query: 298 QRVGN--------LSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEIRNLY 347
++ G+ +S + + + N +Y W + +L E +G+ ++IR Y
Sbjct: 294 KKYGDRAGIEDVIVSKRKYQYEQEVAANPTNYDAWFDYLRLIEAEGDR---DQIRETY 348
Score = 59.3 bits (142), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 149/351 (42%), Gaps = 34/351 (9%)
Query: 27 VAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARELFDASTVADKGHIAAWHGW 86
VA AR ++ + + E WQ + E + I +ARE+++ V + W +
Sbjct: 160 VAGARQVFERWMEWQPEEQA--WQTYVNFELRYKEIDRAREIYE-RFVYVHPDVKNWIKF 216
Query: 87 AVLELRQGNIKKARQLLAKGLKFCGGN---EYIYQTLALLEAKANRYEQARNLFRQATKC 143
A E G I +R++ + ++F G + E ++ A E +++AR +++ A
Sbjct: 217 ARFEESHGFIHGSRRVFERAVEFFGDDYIEERLFIAFARFEEGQKEHDRARIIYKYALDH 276
Query: 144 NPKSCASWI--AWSQMEMQQ------ENNLAARQ--LFERAVQASPKNRFAWHVWGIFEA 193
PK + A+++ E + E+ + +++ +E+ V A+P N AW +
Sbjct: 277 LPKDRTQELFKAYTKHEKKYGDRAGIEDVIVSKRKYQYEQEVAANPTNYDAWFDYLRLIE 336
Query: 194 NMGFIDKGKKLLKIGHAVNP---------RDPVLLQSLALLE-YKYSTANLARKLFRRAS 243
G D+ ++ + + P R L + AL E + A R++++
Sbjct: 337 AEGDRDQIRETYERAISNVPPANEKNFWRRYIYLWINYALYEELEAEDAERTRQIYKTCL 396
Query: 244 EIDPRHQ----PVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQR 299
E+ P Q +W+ + E + L AR +AL + + + + LE +
Sbjct: 397 ELIPHKQFTFSKLWLLYAQFEIRCKELQRAR----KALGLAIGMCPRDKLFRGYIDLEIQ 452
Query: 300 VGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEIRNLYFQQ 350
+ R L+ L ++ +TWM +A+LE G++ RA I L QQ
Sbjct: 453 LREFERCRMLYEKFLEFGPENCVTWMKFAELENLLGDTDRARAIFELAVQQ 503
Score = 56.2 bits (134), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 68/326 (20%), Positives = 138/326 (42%), Gaps = 27/326 (8%)
Query: 30 ARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARELFDASTVADKGHIAAWHGWAVL 89
AR+I+ + + N +W +A +E K + AR L+D + W+ + +
Sbjct: 95 ARSIWERALD-NEHRNVTLWLKYAEMEMKNKQVNHARNLWDRAVTIMPRVNQFWYKYTYM 153
Query: 90 ELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCA 149
E N+ ARQ+ + +++ E +QT E + ++AR ++ + +P
Sbjct: 154 EEMLENVAGARQVFERWMEW-QPEEQAWQTYVNFELRYKEIDRAREIYERFVYVHP-DVK 211
Query: 150 SWIAWSQMEMQQENNLAARQLFERAVQASPKNRFA---WHVWGIFEANMGFIDKGKKLLK 206
+WI +++ E +R++FERAV+ + + + FE D+ + + K
Sbjct: 212 NWIKFARFEESHGFIHGSRRVFERAVEFFGDDYIEERLFIAFARFEEGQKEHDRARIIYK 271
Query: 207 --IGHAVNPRDPVLLQSLALLEYKY------STANLARKLFRRASEI--DPRHQPVWIAW 256
+ H R L ++ E KY ++++ ++ E+ +P + W +
Sbjct: 272 YALDHLPKDRTQELFKAYTKHEKKYGDRAGIEDVIVSKRKYQYEQEVAANPTNYDAWFDY 331
Query: 257 GWMEWKEGNLDTARELYERALS-IDSTTESA--ARCLQAW---GVLEQ-RVGNLSAARRL 309
+ EG+ D RE YERA+S + E R + W + E+ + R++
Sbjct: 332 LRLIEAEGDRDQIRETYERAISNVPPANEKNFWRRYIYLWINYALYEELEAEDAERTRQI 391
Query: 310 FRSSLNINSQSYIT----WMTWAQLE 331
+++ L + T W+ +AQ E
Sbjct: 392 YKTCLELIPHKQFTFSKLWLLYAQFE 417
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 91/217 (41%), Gaps = 8/217 (3%)
Query: 127 ANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWH 186
A+ ++ R F + N + WI ++Q E QQ+ AR ++ERA+ +N W
Sbjct: 55 ADYQQRKRKTFEDNLRKNRMVVSHWIKYAQWEEQQQEIQRARSIWERALDNEHRNVTLWL 114
Query: 187 VWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEID 246
+ E ++ + L + PR +E AR++F R E
Sbjct: 115 KYAEMEMKNKQVNHARNLWDRAVTIMPRVNQFWYKYTYMEEMLENVAGARQVFERWMEWQ 174
Query: 247 PRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQRVGNLSAA 306
P Q W + E + +D ARE+YER + + ++ + + E+ G + +
Sbjct: 175 PEEQ-AWQTYVNFELRYKEIDRAREIYERFVYVHPDVKNWIK----FARFEESHGFIHGS 229
Query: 307 RRLFRSSLNINSQSYIT---WMTWAQLEEDQGNSVRA 340
RR+F ++ YI ++ +A+ EE Q RA
Sbjct: 230 RRVFERAVEFFGDDYIEERLFIAFARFEEGQKEHDRA 266
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 94/231 (40%), Gaps = 51/231 (22%)
Query: 83 WHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATK 142
W +A E+R +++AR+ L + C ++ +++ LE + +E+ R L+ + +
Sbjct: 410 WLLYAQFEIRCKELQRARKALGLAIGMCPRDK-LFRGYIDLEIQLREFERCRMLYEKFLE 468
Query: 143 CNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKN--RFAWHVWGIFEANMGFIDK 200
P++C +W+ ++++E + AR +FE AVQ + W + FE +G
Sbjct: 469 FGPENCVTWMKFAELENLLGDTDRARAIFELAVQQPRLDMPELLWKAYIDFEVALG---- 524
Query: 201 GKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWME 260
LAR+L+ R E +H VW+++ E
Sbjct: 525 ------------------------------ETELARQLYERLLE-RTQHVKVWMSFAKFE 553
Query: 261 W----------KEGNLDTARELYERA---LSIDSTTESAARCLQAWGVLEQ 298
E N+ AR +YERA L ES L+AW E+
Sbjct: 554 MGLSHGDSGPDAELNVQLARRIYERANEMLRQLGDKESRVLLLEAWRDFER 604
Score = 32.7 bits (73), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 44 ENPYIWQCWAVLENKLGNIGKARELFDASTVADKGHIAA--WHGWAVLELRQGNIKKARQ 101
EN W +A LEN LG+ +AR +F+ + + + W + E+ G + ARQ
Sbjct: 472 ENCVTWMKFAELENLLGDTDRARAIFELAVQQPRLDMPELLWKAYIDFEVALGETELARQ 531
Query: 102 LLAKGLK 108
L + L+
Sbjct: 532 LYERLLE 538
>sp|Q12381|PRP1_SCHPO Pre-mRNA-splicing factor prp1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=prp1 PE=1 SV=1
Length = 906
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 125/282 (44%), Gaps = 25/282 (8%)
Query: 57 NKLGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYI 116
N LG+I KAR+L + + H + W A LE + +A+ L+ KG + C +E +
Sbjct: 255 NDLGDIRKARKLLQSVIETNPKHASGWVAAARLEEVANKLSQAQSLILKGCENCSRSEDV 314
Query: 117 YQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQ 176
+ L A +A+ + A K PKS W+ ++E Q ++ +++ ++A++
Sbjct: 315 WLEAIRLHPAA----EAKVIIANAVKKLPKSVTLWLEAEKLENQAQHK---KRIIKKALE 367
Query: 177 ASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLAR 236
+P + W E +D + LL + P L +LA LE T A+
Sbjct: 368 FNPTSVSLWKEAVNLEEE---VDNARILLARAVELIPMSIDLWLALARLE----TYENAK 420
Query: 237 KLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVL 296
K+ +A + VWIA +E ++GN+ ++ R +S LQA G +
Sbjct: 421 KVLNKARQTIRTSHEVWIAAARLEEQQGNVSRVEKIMARGVSE----------LQATGGM 470
Query: 297 EQRVGNLSAARRLFRSSLNINSQSYI-TWMTWAQLEEDQGNS 337
QR LS A + I +Q+ I T + EEDQ ++
Sbjct: 471 LQRDQWLSEAEKCETEGAVITAQAIINTCLGVGLDEEDQFDT 512
Score = 59.3 bits (142), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 93/211 (44%), Gaps = 8/211 (3%)
Query: 4 IDYWPEDGRPYVALGKVLSKQSKVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIG 63
+ +P + Y+ G++ + ++ AR Y G++ P +W A LE K I
Sbjct: 672 LKIYPHYDKLYMMKGQIFEDKEQIELARDAYLAGTKVCPYSIP-LWLLLAKLEEKQSVI- 729
Query: 64 KARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALL 123
+AR +FD + V + + W +ELR GNI + R LAK L+ C + ++ L
Sbjct: 730 RARVVFDRAKVKNPKNEFLWLELIKMELRAGNISQVRAALAKALQECPSSGLLWTEAIWL 789
Query: 124 EAKANRYEQARNLFRQATKCNPKSCA-SWIAWSQMEMQQENNLAARQLFERAVQASPKNR 182
E +A R +A + R+ C + + W + + + AR F +AV+A N
Sbjct: 790 EPRAQRKTRATDALRKCEGNAHLLCTIARMLWLEKKADK-----ARSWFLKAVKADQDNG 844
Query: 183 FAWHVWGIFEANMGFIDKGKKLLKIGHAVNP 213
W + + G D+ K++L +P
Sbjct: 845 DVWCWFYKYSLEAGNEDQQKEVLTSFETADP 875
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 107/280 (38%), Gaps = 7/280 (2%)
Query: 62 IGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLA 121
I AR +F S W LE G + +L K ++ C E ++ A
Sbjct: 526 IDCARAVFAFSLRVYPKSEKLWLRAVELEKLYGTTESVCSILEKAVESCPKAEILWLLYA 585
Query: 122 LLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKN 181
N ARN+ +A + N S W+A ++E N AR+L RA S
Sbjct: 586 KERKNVNDIAGARNILGRAFEYNSNSEEIWLAAVRIEFVNNENERARKLLARARIESGTE 645
Query: 182 RFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPR-DPVLLQSLALLEYKYSTANLARKLFR 240
R W E + D+ +LL+ + P D + + + E K LAR +
Sbjct: 646 RI-WTKSISLERILDEKDRALQLLENALKIYPHYDKLYMMKGQIFEDKEQI-ELARDAYL 703
Query: 241 RASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQRV 300
+++ P P+W+ +E K+ + AR +++RA + E L +E R
Sbjct: 704 AGTKVCPYSIPLWLLLAKLEEKQSVI-RARVVFDRAKVKNPKNEFLWLELIK---MELRA 759
Query: 301 GNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRA 340
GN+S R +L S + W LE RA
Sbjct: 760 GNISQVRAALAKALQECPSSGLLWTEAIWLEPRAQRKTRA 799
Score = 40.0 bits (92), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 91/239 (38%), Gaps = 32/239 (13%)
Query: 64 KARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALL 123
+AR+L + + + G W LE +A QLL LK + +Y +
Sbjct: 630 RARKLLARARI-ESGTERIWTKSISLERILDEKDRALQLLENALKIYPHYDKLYMMKGQI 688
Query: 124 EAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRF 183
+ E AR+ + TK P S W+ +++E +Q + + AR +F+RA +PKN F
Sbjct: 689 FEDKEQIELARDAYLAGTKVCPYSIPLWLLLAKLEEKQ-SVIRARVVFDRAKVKNPKNEF 747
Query: 184 AWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVL------------------------- 218
W E G I + + L P +L
Sbjct: 748 LWLELIKMELRAGNISQVRAALAKALQECPSSGLLWTEAIWLEPRAQRKTRATDALRKCE 807
Query: 219 -----LQSLALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTAREL 272
L ++A + + A+ AR F +A + D + VW + + GN D +E+
Sbjct: 808 GNAHLLCTIARMLWLEKKADKARSWFLKAVKADQDNGDVWCWFYKYSLEAGNEDQQKEV 866
>sp|P87312|CLF1_SCHPO Pre-mRNA-splicing factor cwf4 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=cwf4 PE=1 SV=1
Length = 674
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 143/332 (43%), Gaps = 27/332 (8%)
Query: 24 QSKVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARELFDASTVADKGHIAAW 83
Q + A AR+++ + P +W + E K NI AR LFD + W
Sbjct: 83 QKEFARARSVFERALDVDSTYIP-LWLKYIECEMKNRNINHARNLFDRAVTQLPRVDKLW 141
Query: 84 HGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKC 143
+ + +E GNI RQ+ + LK+ +E + + +E + + E+AR ++ +
Sbjct: 142 YKYVYMEEMLGNITGCRQVFERWLKW-EPDENCWMSYIRMERRYHENERARGIYERFVVV 200
Query: 144 NPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPK---NRFAWHVWGIFEANMGFIDK 200
+P+ +W+ W++ E + N RQ++ A+ A + N + + FE ++
Sbjct: 201 HPE-VTNWLRWARFEEECGNAANVRQVYLAAIDALGQEFLNERFFIAFAKFEIRQKEYER 259
Query: 201 GKKLLKIGHAVNPRDPV--LLQSLALLEYKY-------STANLARKL-FRRASEIDPRHQ 250
+ + K PR L + E ++ ST R+L + + + P
Sbjct: 260 ARTIFKYAIDFMPRSKSMELYKEYTHFEKQFGDHLGVESTVLDKRRLQYEKLLKDSPYDY 319
Query: 251 PVWIAWGWMEWKEGNLDTARELYERALS-IDSTTESAA--RCLQAW---GVLEQ-RVGNL 303
W+ +E G+++T RE YE+A++ + E A R + W + E+ V ++
Sbjct: 320 DTWLDLLKLEESAGDINTIRETYEKAIAKVPEVVEKNAWRRYVYIWLNYCLFEEIDVKDV 379
Query: 304 SAARRLFRSSLNINSQSYIT----WMTWAQLE 331
AR++++ +L + T W+ +A E
Sbjct: 380 DRARKVYQEALKLIPHKKFTFAKLWLMYAMFE 411
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/364 (20%), Positives = 142/364 (39%), Gaps = 37/364 (10%)
Query: 14 YVALGKVLSKQSKVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARELFDAST 73
YV + ++L + R ++ + + EN W + +E + +AR +++
Sbjct: 144 YVYMEEMLGN---ITGCRQVFERWLKWEPDEN--CWMSYIRMERRYHENERARGIYERFV 198
Query: 74 VADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGG---NEYIYQTLALLEAKANRY 130
V + W WA E GN RQ+ + G NE + A E + Y
Sbjct: 199 VV-HPEVTNWLRWARFEEECGNAANVRQVYLAAIDALGQEFLNERFFIAFAKFEIRQKEY 257
Query: 131 EQARNLFRQATKCNP--KSCASWIAWSQMEMQQENNLAA--------RQLFERAVQASPK 180
E+AR +F+ A P KS + ++ E Q ++L R +E+ ++ SP
Sbjct: 258 ERARTIFKYAIDFMPRSKSMELYKEYTHFEKQFGDHLGVESTVLDKRRLQYEKLLKDSPY 317
Query: 181 NRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDP----------VLLQSLALLEYKYS 230
+ W E + G I+ ++ + A P + L E
Sbjct: 318 DYDTWLDLLKLEESAGDINTIRETYEKAIAKVPEVVEKNAWRRYVYIWLNYCLFEEIDVK 377
Query: 231 TANLARKLFRRASEIDPRHQ----PVWIAWGWMEWKEGNLDTARELYERALSIDSTTESA 286
+ ARK+++ A ++ P + +W+ + E ++ +D AR+ RAL +
Sbjct: 378 DVDRARKVYQEALKLIPHKKFTFAKLWLMYAMFELRQRKIDVARKTLGRALGMCPK---- 433
Query: 287 ARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEIRNL 346
+ + + E + R L+ + + ++ W+ +A LE G+S RA + NL
Sbjct: 434 PKLFRGYIEFEDAIKQFDRCRILYEKWILYDPEACAPWLGYAALETKLGDSDRARALYNL 493
Query: 347 YFQQ 350
Q
Sbjct: 494 AVNQ 497
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 91/220 (41%), Gaps = 4/220 (1%)
Query: 124 EAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRF 183
E + +AR++F +A + W+ + + EM+ N AR LF+RAV P+
Sbjct: 80 ELDQKEFARARSVFERALDVDSTYIPLWLKYIECEMKNRNINHARNLFDRAVTQLPRVDK 139
Query: 184 AWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRAS 243
W+ + E +G I +++ + P D S +E +Y AR ++ R
Sbjct: 140 LWYKYVYMEEMLGNITGCRQVFERWLKWEP-DENCWMSYIRMERRYHENERARGIYERFV 198
Query: 244 EIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQRVGNL 303
+ P W+ W E + GN R++Y A+ R A+ E R
Sbjct: 199 VVHP-EVTNWLRWARFEEECGNAANVRQVYLAAIDALGQEFLNERFFIAFAKFEIRQKEY 257
Query: 304 SAARRLFRSSLNI--NSQSYITWMTWAQLEEDQGNSVRAE 341
AR +F+ +++ S+S + + E+ G+ + E
Sbjct: 258 ERARTIFKYAIDFMPRSKSMELYKEYTHFEKQFGDHLGVE 297
Score = 55.5 bits (132), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 89/215 (41%), Gaps = 42/215 (19%)
Query: 134 RNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVWGIFEA 193
R F A + N + W+ + Q E+ Q+ AR +FERA+ +
Sbjct: 56 RKEFEDAIRRNRLAMGHWMRYGQWELDQKEFARARSVFERAL----------------DV 99
Query: 194 NMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDPRHQPVW 253
+ +I P+ L+ + E K N AR LF RA PR +W
Sbjct: 100 DSTYI-----------------PLWLKYIE-CEMKNRNINHARNLFDRAVTQLPRVDKLW 141
Query: 254 IAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQRVGNLSAARRLFRSS 313
+ +ME GN+ R+++ER L E C ++ +E+R AR ++
Sbjct: 142 YKYVYMEEMLGNITGCRQVFERWLK----WEPDENCWMSYIRMERRYHENERARGIYERF 197
Query: 314 LNINSQSYITWMTWAQLEEDQGNSVRAEEIRNLYF 348
+ ++ + W+ WA+ EE+ GN A +R +Y
Sbjct: 198 VVVHPEV-TNWLRWARFEEECGN---AANVRQVYL 228
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 72/169 (42%), Gaps = 7/169 (4%)
Query: 167 ARQLFERAVQASPKNRFA----WHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSL 222
AR++++ A++ P +F W ++ +FE ID +K L + P+ P L +
Sbjct: 382 ARKVYQEALKLIPHKKFTFAKLWLMYAMFELRQRKIDVARKTLGRALGMCPK-PKLFRGY 440
Query: 223 ALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDST 282
E + R L+ + DP W+ + +E K G+ D AR LY A++
Sbjct: 441 IEFEDAIKQFDRCRILYEKWILYDPEACAPWLGYAALETKLGDSDRARALYNLAVN-QPI 499
Query: 283 TESAARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLE 331
E+ +A+ E AR +++ L + W+++A E
Sbjct: 500 LETPELVWKAYIDFEFEEMEYGKARSIYQQLLRTAPHVKV-WISFANFE 547
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 62/139 (44%), Gaps = 5/139 (3%)
Query: 23 KQSKVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARELFDASTVADKGHIAA 82
+Q K+ AR G P +++ + E+ + + R L++ + D A
Sbjct: 413 RQRKIDVARKTL--GRALGMCPKPKLFRGYIEFEDAIKQFDRCRILYEKWILYDPEACAP 470
Query: 83 WHGWAVLELRQGNIKKARQL--LAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQA 140
W G+A LE + G+ +AR L LA E +++ E + Y +AR++++Q
Sbjct: 471 WLGYAALETKLGDSDRARALYNLAVNQPILETPELVWKAYIDFEFEEMEYGKARSIYQQL 530
Query: 141 TKCNPKSCASWIAWSQMEM 159
+ P WI+++ E+
Sbjct: 531 LRTAP-HVKVWISFANFEI 548
>sp|Q5BDX1|CLF1_EMENI Pre-mRNA-splicing factor clf1 OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=clf1
PE=3 SV=2
Length = 673
Score = 65.9 bits (159), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 114/268 (42%), Gaps = 49/268 (18%)
Query: 124 EAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRF 183
E + + +AR++F +A + S WI + + EM+ N AR L +RAV P+
Sbjct: 82 ELEQKEFRRARSIFERALDVDSTSVPLWIRYIESEMRNRNINHARNLLDRAVTILPRVDK 141
Query: 184 AWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRAS 243
W+ + E +G I +++ + + P D + LE +Y+ AR +F+R +
Sbjct: 142 LWYKYVYMEETLGNIPGTRQVFERWMSWEP-DEGAWSAYIKLEKRYNEFERARAIFQRFT 200
Query: 244 EIDPRHQPVWIAWGWMEWKEGNLDTAREL------------------------------Y 273
+ P + WI W E + G D RE+ Y
Sbjct: 201 IVHPEPRN-WIKWARFEEEYGTSDLVREVYGLAVETLGEDFMDEKLFIAYARFETKLKEY 259
Query: 274 ERALSI-----DSTTESAARCL-QAWGVLEQRVGN-------LSAARRL-FRSSLNINSQ 319
ERA +I D S + L +A+ E++ G+ + A RR+ + L N +
Sbjct: 260 ERARAIYKYALDRLPRSKSITLHKAYTTFEKQFGDREGVENVILAKRRVQYEEQLKENLR 319
Query: 320 SYITWMTWAQLEEDQGNSVRAEEIRNLY 347
+Y W +A+LEE G+ E +R++Y
Sbjct: 320 NYDVWFDFARLEEQSGDP---ERVRDVY 344
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 90/229 (39%), Gaps = 39/229 (17%)
Query: 118 QTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQA 177
Q A LE + R F + N + +W+ ++ E++Q+ AR +FERA+
Sbjct: 42 QRFADLEELHEYQGRKRKEFEDYVRRNRINMNNWMRYAAWELEQKEFRRARSIFERALDV 101
Query: 178 SPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARK 237
+ W + +I+ + I H AR
Sbjct: 102 DSTSVPLW---------IRYIESEMRNRNINH-------------------------ARN 127
Query: 238 LFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLE 297
L RA I PR +W + +ME GN+ R+++ER +S E A+ LE
Sbjct: 128 LLDRAVTILPRVDKLWYKYVYMEETLGNIPGTRQVFERWMS----WEPDEGAWSAYIKLE 183
Query: 298 QRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEIRNL 346
+R AR +F+ ++ + W+ WA+ EE+ G S E+ L
Sbjct: 184 KRYNEFERARAIFQRFTIVHPEPR-NWIKWARFEEEYGTSDLVREVYGL 231
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 85/438 (19%), Positives = 164/438 (37%), Gaps = 95/438 (21%)
Query: 23 KQSKVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARELFDASTVADKGHIAA 82
+Q + AR+I+ + P +W + E + NI AR L D +
Sbjct: 84 EQKEFRRARSIFERALDVDSTSVP-LWIRYIESEMRNRNINHARNLLDRAVTILPRVDKL 142
Query: 83 WHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATK 142
W+ + +E GNI RQ+ + + + +E + LE + N +E+AR +F++ T
Sbjct: 143 WYKYVYMEETLGNIPGTRQVFERWMSW-EPDEGAWSAYIKLEKRYNEFERARAIFQRFTI 201
Query: 143 CNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRF---AWHVWGIFEANMGFID 199
+P+ +WI W++ E + + R+++ AV+ ++ + + FE + +
Sbjct: 202 VHPEP-RNWIKWARFEEEYGTSDLVREVYGLAVETLGEDFMDEKLFIAYARFETKLKEYE 260
Query: 200 KGKKLLKIGHAVNPRDP--VLLQSLALLEYKYSTAN------LARKLFRRASEI--DPRH 249
+ + + K PR L ++ E ++ LA++ + ++ + R+
Sbjct: 261 RARAIYKYALDRLPRSKSITLHKAYTTFEKQFGDREGVENVILAKRRVQYEEQLKENLRN 320
Query: 250 QPVWIAWGWMEWKEGNLDTARELYER-------------------------------ALS 278
VW + +E + G+ + R++YER A
Sbjct: 321 YDVWFDFARLEEQSGDPERVRDVYERAIAQIPPSQEKRHWRRYIYLWIFYALWEEMEAKD 380
Query: 279 IDSTTESAARCLQ-----------AW---GVLEQRVGNLSAARR-------------LFR 311
ID + CL+ W E R NL AAR+ LFR
Sbjct: 381 IDRARQVYTECLKLIPHKKFTFAKVWLMKAQFEVRQLNLQAARKTLGQAIGMCPKDKLFR 440
Query: 312 SSLNINSQSY--------------------ITWMTWAQLEEDQGNSVRAEEIRNLYFQQR 351
+++ Q + +W+ +A+LE ++ RA I L Q
Sbjct: 441 GYIDLERQLFEFVRCRTLYEKQIEWNPSNSQSWIQYAELERGLDDTERARAIYELGIDQP 500
Query: 352 TEVVDDASWVMGFMDIID 369
T + + W ++D D
Sbjct: 501 TLDMPELVW-KAYIDFED 517
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 81/165 (49%), Gaps = 8/165 (4%)
Query: 47 YIWQCWAVLEN-KLGNIGKARELFDA--STVADKGHIAA--WHGWAVLELRQGNIKKARQ 101
Y+W +A+ E + +I +AR+++ + K A W A E+RQ N++ AR+
Sbjct: 365 YLWIFYALWEEMEAKDIDRARQVYTECLKLIPHKKFTFAKVWLMKAQFEVRQLNLQAARK 424
Query: 102 LLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQ 161
L + + C ++ +++ LE + + + R L+ + + NP + SWI ++++E
Sbjct: 425 TLGQAIGMCPKDK-LFRGYIDLERQLFEFVRCRTLYEKQIEWNPSNSQSWIQYAELERGL 483
Query: 162 ENNLAARQLFERAVQASPKN--RFAWHVWGIFEANMGFIDKGKKL 204
++ AR ++E + + W + FE + G ++ ++L
Sbjct: 484 DDTERARAIYELGIDQPTLDMPELVWKAYIDFEDDEGEYERERQL 528
Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 62/303 (20%), Positives = 119/303 (39%), Gaps = 44/303 (14%)
Query: 10 DGRPYVALGKVLSKQSKVAEARAIYAKG-SQATQGENPYIWQCWAVLENKLGN------- 61
D + ++A + +K + ARAIY + + ++ + + + E + G+
Sbjct: 242 DEKLFIAYARFETKLKEYERARAIYKYALDRLPRSKSITLHKAYTTFEKQFGDREGVENV 301
Query: 62 -IGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNE------ 114
+ K R ++ + + W +A LE + G+ ++ R + + + ++
Sbjct: 302 ILAKRRVQYEEQLKENLRNYDVWFDFARLEEQSGDPERVRDVYERAIAQIPPSQEKRHWR 361
Query: 115 -YIYQTLALL---EAKANRYEQARNLFRQATKCNPKS----CASWIAWSQMEMQQENNLA 166
YIY + E +A ++AR ++ + K P W+ +Q E++Q N A
Sbjct: 362 RYIYLWIFYALWEEMEAKDIDRARQVYTECLKLIPHKKFTFAKVWLMKAQFEVRQLNLQA 421
Query: 167 ARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAV---------NPRDPV 217
AR+ +A+ PK++ G+ID ++L + NP +
Sbjct: 422 ARKTLGQAIGMCPKDKLF----------RGYIDLERQLFEFVRCRTLYEKQIEWNPSNSQ 471
Query: 218 LLQSLALLEYKYSTANLARKLFRRASEIDPRHQP--VWIAWGWMEWKEGNLDTARELYER 275
A LE AR ++ + P VW A+ E EG + R+LYER
Sbjct: 472 SWIQYAELERGLDDTERARAIYELGIDQPTLDMPELVWKAYIDFEDDEGEYERERQLYER 531
Query: 276 ALS 278
L
Sbjct: 532 LLQ 534
>sp|Q6CJK2|CLF1_KLULA Pre-mRNA-splicing factor CLF1 OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=CLF1 PE=3 SV=1
Length = 684
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 148/365 (40%), Gaps = 43/365 (11%)
Query: 14 YVALGKVLSKQSKVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARELFDAST 73
Y+ L + L Q V R IY + G P W + E + N R ++ +
Sbjct: 137 YLLLEESLGNQGIV---RGIYTRWCSFEPG--PDAWDSFIEFETRCLNFENVRNIY-SKF 190
Query: 74 VADKGHIAAWHGWAVLELRQGNIKKARQLLAKGL----KFCGGN----EYIYQTLALLEA 125
V I W W E G+I R + + L F G E + + A EA
Sbjct: 191 VLVHPQIDTWLKWVRFEQTHGDISSVRTVFSFALDTLTSFSGTPLVDIERVIGSFASWEA 250
Query: 126 KANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQ-------QENNLAARQL-FERAVQA 177
YE++R L+R A + P S A Q E + ++ +A R+ +E+ +++
Sbjct: 251 SQGEYERSRTLYRLAVERWPISEALKEQQIQFEKKFGSSKNMEDIVIAKRKAEYEQYLKS 310
Query: 178 SPKNRFAWHVW----------GIFEANMGFID--KGKKLLKIGHAVNPRDPVLLQSLALL 225
P + W V+ + A FI+ K K L+K + + ++ L L
Sbjct: 311 DPYHYSTWWVYIDLVEEKYQEQLTSAFQSFIELAKPKSLVK-DSSWKRYIRICVRYLVYL 369
Query: 226 EYKYSTANLARKLFRRASEIDPRHQ----PVWIAWGWMEWKEGNLDTARELYERALSIDS 281
E + R +++ +I P + +WI + E ++ NL AR++ L +
Sbjct: 370 ELTINDLPTIRSVYQDILDIIPHKKFTFGKLWIMYAEFEIRQNNLLKARKI----LGVSL 425
Query: 282 TTESAARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAE 341
+ + + LE R+ R+L+ ++ N S +W+ +A+LEE+ G+ R+
Sbjct: 426 GKSPKPKVFKYYINLEIRLKEFDRVRKLYEKYIDFNPSSVQSWLDYAELEENLGDEDRSR 485
Query: 342 EIRNL 346
I ++
Sbjct: 486 GIYDI 490
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/359 (20%), Positives = 143/359 (39%), Gaps = 68/359 (18%)
Query: 49 WQCWAVLENKLGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKG-- 106
W +A E +I +AR +++ + + D G I W + E++ NI AR LL +
Sbjct: 66 WMRYAQFEFDQKDIRRARSIYERALLVDHGFIPLWIQYIDSEIKWKNINHARNLLDRATN 125
Query: 107 --------------LKFCGGNEYI-----------------YQTLALLEAKANRYEQARN 135
L+ GN+ I + + E + +E RN
Sbjct: 126 ALPRVDKLWFKYLLLEESLGNQGIVRGIYTRWCSFEPGPDAWDSFIEFETRCLNFENVRN 185
Query: 136 LFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQA------SPKNRFAWHVWG 189
++ + +P+ +W+ W + E + + R +F A+ +P V G
Sbjct: 186 IYSKFVLVHPQ-IDTWLKWVRFEQTHGDISSVRTVFSFALDTLTSFSGTPLVDIE-RVIG 243
Query: 190 IF---EANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKY-STANLARKLF-RRASE 244
F EA+ G ++ + L ++ P L + E K+ S+ N+ + +R +E
Sbjct: 244 SFASWEASQGEYERSRTLYRLAVERWPISEALKEQQIQFEKKFGSSKNMEDIVIAKRKAE 303
Query: 245 I------DPRHQPVWIAWGWMEWKE----GNLDTARELY-----ERALSIDSTTESAAR- 288
DP H W W +++ E L +A + + ++L DS+ + R
Sbjct: 304 YEQYLKSDPYHYSTW--WVYIDLVEEKYQEQLTSAFQSFIELAKPKSLVKDSSWKRYIRI 361
Query: 289 CLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYIT----WMTWAQLEEDQGNSVRAEEI 343
C++ LE + +L R +++ L+I T W+ +A+ E Q N ++A +I
Sbjct: 362 CVRYLVYLELTINDLPTIRSVYQDILDIIPHKKFTFGKLWIMYAEFEIRQNNLLKARKI 420
Score = 48.9 bits (115), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 80/216 (37%), Gaps = 55/216 (25%)
Query: 134 RNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVWGIFEA 193
R + K N W+ ++Q E Q++ AR ++ERA+
Sbjct: 49 RTEYETVLKRNRLDLRQWMRYAQFEFDQKDIRRARSIYERALL----------------V 92
Query: 194 NMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDPRHQPVW 253
+ GFI P+ +Q + E K+ N AR L RA+ PR +W
Sbjct: 93 DHGFI-----------------PLWIQYID-SEIKWKNINHARNLLDRATNALPRVDKLW 134
Query: 254 IAWGWMEWKEGNLDTARELYERALSI-------DSTTESAARCLQAWGVLEQRVGNLSAA 306
+ +E GN R +Y R S DS E RCL N
Sbjct: 135 FKYLLLEESLGNQGIVRGIYTRWCSFEPGPDAWDSFIEFETRCL-----------NFENV 183
Query: 307 RRLFRSSLNINSQSYITWMTWAQLEEDQGN--SVRA 340
R ++ + ++ Q TW+ W + E+ G+ SVR
Sbjct: 184 RNIYSKFVLVHPQ-IDTWLKWVRFEQTHGDISSVRT 218
Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/191 (18%), Positives = 81/191 (42%), Gaps = 11/191 (5%)
Query: 148 CASWIAWSQMEMQQENNLAA-RQLFERAVQASPKNRFA----WHVWGIFEANMGFIDKGK 202
C ++ + ++ + N+L R +++ + P +F W ++ FE + K +
Sbjct: 362 CVRYLVYLELTI---NDLPTIRSVYQDILDIIPHKKFTFGKLWIMYAEFEIRQNNLLKAR 418
Query: 203 KLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWK 262
K+L + +P+ P + + LE + + RKL+ + + +P W+ + +E
Sbjct: 419 KILGVSLGKSPK-PKVFKYYINLEIRLKEFDRVRKLYEKYIDFNPSSVQSWLDYAELEEN 477
Query: 263 EGNLDTARELYERALS--IDSTTESAARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQS 320
G+ D +R +Y+ ++S + + +Q + E AR L+ L ++
Sbjct: 478 LGDEDRSRGIYDISMSNNVGLSESDQLIVIQRYIAFETDAAEYEKARELYEKYLILSRYD 537
Query: 321 YITWMTWAQLE 331
W+ A E
Sbjct: 538 VNIWINQALFE 548
Score = 35.0 bits (79), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 54/135 (40%), Gaps = 27/135 (20%)
Query: 223 ALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDST 282
A E+ AR ++ RA +D P+WI + E K N++ AR L +RA
Sbjct: 70 AQFEFDQKDIRRARSIYERALLVDHGFIPLWIQYIDSEIKWKNINHARNLLDRA------ 123
Query: 283 TESAARCLQAWG---VLEQRVGNLSAARRLFRSSLNINSQSYITWMT-------WAQLEE 332
T + R + W +LE+ +GN R + Y W + W E
Sbjct: 124 TNALPRVDKLWFKYLLLEESLGNQGIVRGI-----------YTRWCSFEPGPDAWDSFIE 172
Query: 333 DQGNSVRAEEIRNLY 347
+ + E +RN+Y
Sbjct: 173 FETRCLNFENVRNIY 187
>sp|Q9LEM8|NAC2_CHLRE PsbD mRNA maturation factor Nac2, chloroplastic OS=Chlamydomonas
reinhardtii GN=NAC2 PE=1 SV=1
Length = 1385
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 94/226 (41%), Gaps = 13/226 (5%)
Query: 52 WAVLENKLGNIGKARELFDASTVADKGH---------IAAWHGWAVLELRQGNIKKARQL 102
W E +L G AR LF A+ H A H W EL GN++ AR +
Sbjct: 914 WGKHEWRLRMYGSARHLFRAAADEAARHSGGLAAGGGGAVMHYWGSRELEAGNVRNARIV 973
Query: 103 LAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQE 162
A+ L+ C + +Y A +E +A+ E A+ ++A + ++ W ++E
Sbjct: 974 AAEALRKCPADVALYVLAASVELEASNLELAKGYCQRAYALDRTDKQLFLIWPRVEAGLG 1033
Query: 163 NNLAARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVL---- 218
+ AR LFERA+ A P N +++ FEA G + +L ++P P
Sbjct: 1034 DRDKARLLFERALDAHPLNTKIINMYARFEAEEGSYREAAELYDRALQIDPLSPGPGVHN 1093
Query: 219 LQSLALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEG 264
A +E LAR+L E P + + + ++ EG
Sbjct: 1094 RADWASMETDLGNTGLARQLLEEGLEAHPNSAALLVVYSKLQRLEG 1139
Score = 35.8 bits (81), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 51/138 (36%), Gaps = 38/138 (27%)
Query: 48 IWQCWAVLENKLGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGL 107
++ W +E LG+ KAR LF+ R L A L
Sbjct: 1021 LFLIWPRVEAGLGDRDKARLLFE-----------------------------RALDAHPL 1051
Query: 108 KFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIA----WSQMEMQQEN 163
N I A EA+ Y +A L+ +A + +P S + W+ ME N
Sbjct: 1052 -----NTKIINMYARFEAEEGSYREAAELYDRALQIDPLSPGPGVHNRADWASMETDLGN 1106
Query: 164 NLAARQLFERAVQASPKN 181
ARQL E ++A P +
Sbjct: 1107 TGLARQLLEEGLEAHPNS 1124
>sp|Q5K654|CLF1_PARBR Pre-mRNA-splicing factor CLF1 OS=Paracoccidioides brasiliensis
GN=CLF1 PE=3 SV=1
Length = 677
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 90/194 (46%), Gaps = 6/194 (3%)
Query: 124 EAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRF 183
E + + +AR++F +A +P + WI + + EM+ N AR L +RAV +
Sbjct: 82 ELEQKEFRRARSVFERALDVDPTAVVLWIRYIEAEMKTRNINHARNLLDRAVTIYSRVDK 141
Query: 184 AWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRAS 243
W+ + E +G I +++ + + P D + LE +Y+ + R +F R +
Sbjct: 142 LWYKYVYMEEMLGNIPGTRQVFERWMSWEP-DEGAWGAYIKLEKRYNEFDRVRAIFERFT 200
Query: 244 EIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAA--RCLQAWGVLEQRVG 301
+ P + WI W E + G D RE+Y L+I++ E + A+ E ++
Sbjct: 201 VVHPEPKN-WIKWARFEEEYGTSDMVREVY--GLAIETLGEDFMDEKLFIAYARYEAKLK 257
Query: 302 NLSAARRLFRSSLN 315
AR +++ +L+
Sbjct: 258 EFERARAIYKYALD 271
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 121/331 (36%), Gaps = 60/331 (18%)
Query: 118 QTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQA 177
Q A LE + R F + N S +W+ ++Q E++Q+ AR +FERA+
Sbjct: 42 QRFADLEELHEYQGRKRKEFEDYVRRNRISMNNWMRYAQWELEQKEFRRARSVFERALDV 101
Query: 178 SPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARK 237
P W + +I+ K I HA R
Sbjct: 102 DPTAVVLW---------IRYIEAEMKTRNINHA-------------------------RN 127
Query: 238 LFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGV-- 295
L RA I R +W + +ME GN+ R+++ER +S + AWG
Sbjct: 128 LLDRAVTIYSRVDKLWYKYVYMEEMLGNIPGTRQVFERWMSWEPDE-------GAWGAYI 180
Query: 296 -LEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEIRNLYFQQRTEV 354
LE+R R +F ++ + W+ WA+ EE+ G S E+ L + E
Sbjct: 181 KLEKRYNEFDRVRAIFERFTVVHPEPK-NWIKWARFEEEYGTSDMVREVYGLAIETLGED 239
Query: 355 VDDASWVMGFMD-------------IIDPALDRIKQLLNLEKSSYKEPSAYSPGDNESTD 401
D + + I ALDR+ + ++ GD E +
Sbjct: 240 FMDEKLFIAYARYEAKLKEFERARAIYKYALDRLPRAKSVALHKAYTTFEKQFGDREGVE 299
Query: 402 DEASVSRYSGLYVGNDLESASGFDL-DDFIR 431
D +S+ Y E+ +D+ DF+R
Sbjct: 300 D-VILSKRRVQYEEQIKENPKNYDIWFDFVR 329
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/244 (19%), Positives = 110/244 (45%), Gaps = 15/244 (6%)
Query: 48 IWQCWAVLENKLGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGL 107
+W + E K NI AR L D + W+ + +E GNI RQ+ + +
Sbjct: 108 LWIRYIEAEMKTRNINHARNLLDRAVTIYSRVDKLWYKYVYMEEMLGNIPGTRQVFERWM 167
Query: 108 KFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAA 167
+ +E + LE + N +++ R +F + T +P+ +WI W++ E + +
Sbjct: 168 SW-EPDEGAWGAYIKLEKRYNEFDRVRAIFERFTVVHPEP-KNWIKWARFEEEYGTSDMV 225
Query: 168 RQLFERAVQASPKNRF---AWHVWGIFEANMGFIDKGKKLLKIGHAVNPR--DPVLLQSL 222
R+++ A++ ++ + + +EA + ++ + + K PR L ++
Sbjct: 226 REVYGLAIETLGEDFMDEKLFIAYARYEAKLKEFERARAIYKYALDRLPRAKSVALHKAY 285
Query: 223 ALLEYKYSTAN------LARKLFRRASEI--DPRHQPVWIAWGWMEWKEGNLDTARELYE 274
E ++ L+++ + +I +P++ +W + +E G+++ R++YE
Sbjct: 286 TTFEKQFGDREGVEDVILSKRRVQYEEQIKENPKNYDIWFDFVRLEESSGDVERVRDVYE 345
Query: 275 RALS 278
RA++
Sbjct: 346 RAIA 349
Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 67/329 (20%), Positives = 132/329 (40%), Gaps = 32/329 (9%)
Query: 49 WQCWAVLENKLGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLK 108
W + LE + + R +F+ TV W WA E G R++ ++
Sbjct: 176 WGAYIKLEKRYNEFDRVRAIFERFTVVH-PEPKNWIKWARFEEEYGTSDMVREVYGLAIE 234
Query: 109 FCGGN---EYIYQTLALLEAKANRYEQARNLFRQATKCNP--KSCASWIAWSQMEMQ--- 160
G + E ++ A EAK +E+AR +++ A P KS A A++ E Q
Sbjct: 235 TLGEDFMDEKLFIAYARYEAKLKEFERARAIYKYALDRLPRAKSVALHKAYTTFEKQFGD 294
Query: 161 ----QENNLAARQL-FERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNP-- 213
++ L+ R++ +E ++ +PKN W + E + G +++ + + + A P
Sbjct: 295 REGVEDVILSKRRVQYEEQIKENPKNYDIWFDFVRLEESSGDVERVRDVYERAIAQMPPS 354
Query: 214 ------RDPVLLQSLALL--EYKYSTANLARKLFRRASEIDPRHQ----PVWIAWGWMEW 261
R + L L E + A ++++ + P + +W+ E
Sbjct: 355 QEKRHWRRYIYLWIFYALWEELEAKDMERAHQIYQECIRLIPHKKFTFAKIWLMKAQFEI 414
Query: 262 KEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSY 321
++ +L AR+ A+ + + + LE+++ R+LF + + +
Sbjct: 415 RQMDLQAARKTLGHAIGACPKD----KLFKGYIDLERQLFEFVRCRKLFEKQIEWSPSNC 470
Query: 322 ITWMTWAQLEEDQGNSVRAEEIRNLYFQQ 350
W+ +A+LE + RA I L Q
Sbjct: 471 QAWIKFAELERGLDDIDRARAIYELGISQ 499
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 120/298 (40%), Gaps = 41/298 (13%)
Query: 44 ENPY---IWQCWAVLENKLGNIGKARELFDASTVA-----DKGH----IAAWHGWAVLE- 90
ENP IW + LE G++ + R++++ + +K H I W +A+ E
Sbjct: 316 ENPKNYDIWFDFVRLEESSGDVERVRDVYERAIAQMPPSQEKRHWRRYIYLWIFYALWEE 375
Query: 91 LRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEA----KANRYEQARNLFRQATKCNPK 146
L ++++A Q+ + ++ ++ + + L++A + + AR A PK
Sbjct: 376 LEAKDMERAHQIYQECIRLIPHKKFTFAKIWLMKAQFEIRQMDLQAARKTLGHAIGACPK 435
Query: 147 SCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLK 206
+ + +E Q + R+LFE+ ++ SP N AW + E + ID+ + + +
Sbjct: 436 D-KLFKGYIDLERQLFEFVRCRKLFEKQIEWSPSNCQAWIKFAELERGLDDIDRARAIYE 494
Query: 207 IGHAVNPRD-PVLL-QSLALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEW--- 261
+G + D P LL +S E + R L+ R E H VWI + E
Sbjct: 495 LGISQPVLDMPELLWKSYIDFEEYEGEYDRTRALYERLLE-KTNHVKVWINFARFEINIP 553
Query: 262 --------------KEGNLDTARELYERALSI---DSTTESAARCLQAWGVLEQRVGN 302
E AR ++ERA + E L AW EQ G+
Sbjct: 554 EGEEEDEDEEEKPVSEEAKRRARMVFERAHKVFKEKEMKEERVALLNAWKSFEQTHGS 611
>sp|Q5RCC2|PRP6_PONAB Pre-mRNA-processing factor 6 OS=Pongo abelii GN=PRPF6 PE=2 SV=1
Length = 941
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 115/287 (40%), Gaps = 12/287 (4%)
Query: 60 GNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQT 119
G++ AR + + A+ W LE ++AR+LLAK + ++
Sbjct: 622 GDVPAARSILALAFQANPNSEEIWLAAVKLESENDEYERARRLLAKA-RSSAPTARVFMK 680
Query: 120 LALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASP 179
LE + A++L +A + W+ Q+E Q+E AR+ + + ++ P
Sbjct: 681 SVKLEWVQDNIRAAQDLCEEALRHYEDFPKLWMMKGQIEEQKEMMEKAREAYNQGLKKCP 740
Query: 180 KNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLF 239
+ W + E +G + + + +L+ NP++P L LEY+ N+A L
Sbjct: 741 HSTPLWLLLSRLEEKIGQLTRTRAILEKSRLKNPKNPGLWLESVRLEYRAGLKNIANTLM 800
Query: 240 RRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDS--TTESAARCLQAWGVLE 297
+A + P +W ++E + R S+D+ E L A L
Sbjct: 801 AKALQECPNSGILWSEAIFLEARP---------QRRTKSVDALKKCEHDPHVLLAVAKLF 851
Query: 298 QRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEIR 344
++ AR F ++ I+S W + + E G R EE+R
Sbjct: 852 WSQRKITKAREWFHRTVKIDSDLGDAWAFFYKFELQHGTEERQEEVR 898
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 90/201 (44%), Gaps = 13/201 (6%)
Query: 18 GKVLSKQSKVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARELFDASTVADK 77
G++ ++ + +AR Y +G + P +W + LE K+G + + R + + S + +
Sbjct: 716 GQIEEQKEMMEKAREAYNQGLKKCPHSTP-LWLLLSRLEEKIGQLTRTRAILEKSRLKNP 774
Query: 78 GHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLF 137
+ W LE R G A L+AK L+ C + ++ LEA+ R ++ +
Sbjct: 775 KNPGLWLESVRLEYRAGLKNIANTLMAKALQECPNSGILWSEAIFLEARPQRRTKSVDAL 834
Query: 138 RQATKC--NPKS--CASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVWGIFEA 193
+ KC +P + + WSQ ++ + AR+ F R V+ AW + FE
Sbjct: 835 K---KCEHDPHVLLAVAKLFWSQRKITK-----AREWFHRTVKIDSDLGDAWAFFYKFEL 886
Query: 194 NMGFIDKGKKLLKIGHAVNPR 214
G ++ +++ K + PR
Sbjct: 887 QHGTEERQEEVRKRCESAEPR 907
Score = 53.1 bits (126), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 96/220 (43%), Gaps = 15/220 (6%)
Query: 59 LGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQ 118
+ +I KAR L + + H AW A LE G ++ AR L+ KG + C +E ++
Sbjct: 288 INDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWL 347
Query: 119 TLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQAS 178
A L+ + A+ + QA + P+ +I +++E + A +++ +A++
Sbjct: 348 EAARLQPG----DTAKAVVAQAVRHLPQFVRIYIRAAELET---DIRAKKRVLRKALEHV 400
Query: 179 PKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKL 238
P + W E + + +L P L +LA LE T ARK+
Sbjct: 401 PNSVRLWKAAVELEEP----EDARIMLSRAVECCPTSVELWLALARLE----TYENARKV 452
Query: 239 FRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALS 278
+A E P + +WI +E GN ++ +RA++
Sbjct: 453 LNKARENIPTDRHIWITAAKLEEANGNTQMVEKIIDRAIT 492
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 92/220 (41%), Gaps = 4/220 (1%)
Query: 61 NIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTL 120
NI A++L + + + W +E ++ ++KAR+ +GLK C + ++ L
Sbjct: 690 NIRAAQDLCEEALRHYEDFPKLWMMKGQIEEQKEMMEKAREAYNQGLKKCPHSTPLWLLL 749
Query: 121 ALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPK 180
+ LE K + + R + ++ NPK+ W+ ++E + A L +A+Q P
Sbjct: 750 SRLEEKIGQLTRTRAILEKSRLKNPKNPGLWLESVRLEYRAGLKNIANTLMAKALQECPN 809
Query: 181 NRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFR 240
+ W EA K LK DP +L ++A L + AR+ F
Sbjct: 810 SGILWSEAIFLEARPQRRTKSVDALKKCE----HDPHVLLAVAKLFWSQRKITKAREWFH 865
Query: 241 RASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSID 280
R +ID W + E + G + E+ +R S +
Sbjct: 866 RTVKIDSDLGDAWAFFYKFELQHGTEERQEEVRKRCESAE 905
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 84/216 (38%), Gaps = 4/216 (1%)
Query: 128 NRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHV 187
N E AR ++ A + P + W+ + + L +RAV PK W +
Sbjct: 554 NALECARAIYAYALQVFPSKKSVWLRAAYFGKNHGTRESLEALLQRAVAHCPKAEVLWLM 613
Query: 188 WGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDP 247
+ G + + +L + NP + + LE + AR+L +A P
Sbjct: 614 GAKSKWLTGDVPAARSILALAFQANPNSEEIWLAAVKLESENDEYERARRLLAKARSSAP 673
Query: 248 RHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQRVGNLSAAR 307
+ V++ +EW + N+ A++L E AL E + G +E++ + AR
Sbjct: 674 TAR-VFMKSVKLEWVQDNIRAAQDLCEEAL---RHYEDFPKLWMMKGQIEEQKEMMEKAR 729
Query: 308 RLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEI 343
+ L S W+ ++LEE G R I
Sbjct: 730 EAYNQGLKKCPHSTPLWLLLSRLEEKIGQLTRTRAI 765
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 93/216 (43%), Gaps = 18/216 (8%)
Query: 128 NRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHV 187
N ++AR L + + NP +WIA +++E AR L + + PK+ W
Sbjct: 289 NDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVW-- 346
Query: 188 WGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDP 247
+ A + D K ++ P+ + A LE + +++ R+A E P
Sbjct: 347 --LEAARLQPGDTAKAVVAQAVRHLPQFVRIYIRAAELE---TDIRAKKRVLRKALEHVP 401
Query: 248 RHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQRVGNLSAAR 307
+W A +E E AR + RA+ T+ ++ W L + +A +
Sbjct: 402 NSVRLWKAAVELEEPE----DARIMLSRAVECCPTS------VELWLALARLETYENARK 451
Query: 308 RLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEI 343
L ++ NI + +I W+T A+LEE GN+ E+I
Sbjct: 452 VLNKARENIPTDRHI-WITAAKLEEANGNTQMVEKI 486
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 97/243 (39%), Gaps = 16/243 (6%)
Query: 99 ARQLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQME 158
AR + A L+ + ++ A E L ++A PK+ W+ ++ +
Sbjct: 559 ARAIYAYALQVFPSKKSVWLRAAYFGKNHGTRESLEALLQRAVAHCPKAEVLWLMGAKSK 618
Query: 159 MQQENNLAARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVL 218
+ AAR + A QA+P + W E+ ++ ++LL + P V
Sbjct: 619 WLTGDVPAARSILALAFQANPNSEEIWLAAVKLESENDEYERARRLLAKARSSAPTARVF 678
Query: 219 LQSLALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALS 278
++S+ LE+ A+ L A +W+ G +E ++ ++ ARE Y + L
Sbjct: 679 MKSVK-LEWVQDNIRAAQDLCEEALRHYEDFPKLWMMKGQIEEQKEMMEKAREAYNQGLK 737
Query: 279 IDSTTESAARCLQAWGV------LEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEE 332
+C + + LE+++G L+ R + S N ++ W+ +LE
Sbjct: 738 ---------KCPHSTPLWLLLSRLEEKIGQLTRTRAILEKSRLKNPKNPGLWLESVRLEY 788
Query: 333 DQG 335
G
Sbjct: 789 RAG 791
Score = 41.6 bits (96), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 72/180 (40%), Gaps = 4/180 (2%)
Query: 166 AARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALL 225
AR ++ A+Q P + W F N G + + LL+ A P+ VL A
Sbjct: 558 CARAIYAYALQVFPSKKSVWLRAAYFGKNHGTRESLEALLQRAVAHCPKAEVLWLMGAKS 617
Query: 226 EYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTES 285
++ AR + A + +P + +W+A +E + + AR L +A S T
Sbjct: 618 KWLTGDVPAARSILALAFQANPNSEEIWLAAVKLESENDEYERARRLLAKARSSAPT--- 674
Query: 286 AARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEIRN 345
AR LE N+ AA+ L +L WM Q+EE + +A E N
Sbjct: 675 -ARVFMKSVKLEWVQDNIRAAQDLCEEALRHYEDFPKLWMMKGQIEEQKEMMEKAREAYN 733
>sp|Q4PB37|CLF1_USTMA Pre-mRNA-splicing factor CLF1 OS=Ustilago maydis (strain 521 / FGSC
9021) GN=CLF1 PE=3 SV=1
Length = 781
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 105/240 (43%), Gaps = 10/240 (4%)
Query: 107 LKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLA 166
L+ G N + A EA ++ R+++ +A P W+ +++ E++ N
Sbjct: 63 LRRNGLNMSTWIKYASWEASQGEMDRCRSIYERALDVEPHHLPLWLRYTEQELKMRNVQH 122
Query: 167 ARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLE 226
AR L++RAV P+ W+ + E +G I +++ + P + + LE
Sbjct: 123 ARNLYDRAVSILPRIDQLWYKYVHLEELLGNIPGTRQVFERWMKWEPEEKA-WHAYINLE 181
Query: 227 YKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSI----DST 282
+Y + A ++ R P + WI W E GNL+ AR +++ AL +
Sbjct: 182 VRYDELDRASAIWERCVTCHPVPKQ-WIRWAKFEEDRGNLEKARIVFQMALDYIGEDEDA 240
Query: 283 TESAARCLQAWGVLEQRVGNLSAARRLFRSSLN--INSQSYITWMTWAQLEEDQG--NSV 338
E A A+ +E R+ AR +++ +L S+S + ++ + E+ G NSV
Sbjct: 241 MEKAQSVFTAFAKMETRLKEYERARVIYKYALERLPRSKSEGIYSSYTRFEKQFGTMNSV 300
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 124/293 (42%), Gaps = 27/293 (9%)
Query: 63 GKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLAL 122
G+ R F+ + +++ W +A E QG + + R + + L + ++
Sbjct: 53 GRRRSEFEDRLRRNGLNMSTWIKYASWEASQGEMDRCRSIYERALDVEPHHLPLWLRYTE 112
Query: 123 LEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNR 182
E K + ARNL+ +A P+ W + +E N RQ+FER ++ P+ +
Sbjct: 113 QELKMRNVQHARNLYDRAVSILPRIDQLWYKYVHLEELLGNIPGTRQVFERWMKWEPEEK 172
Query: 183 FAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANL--ARKLFR 240
AWH + E +D+ + + +P V Q + +++ NL AR +F+
Sbjct: 173 -AWHAYINLEVRYDELDRASAIWERCVTCHP---VPKQWIRWAKFEEDRGNLEKARIVFQ 228
Query: 241 RA-------SEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAW 293
A + + Q V+ A+ ME + + AR +Y+ AL ++S ++
Sbjct: 229 MALDYIGEDEDAMEKAQSVFTAFAKMETRLKEYERARVIYKYALERLPRSKSEG-IYSSY 287
Query: 294 GVLEQRVGNLSA------ARRLFRSSLNINSQS-------YITWMTWAQLEED 333
E++ G +++ +R + + +Q Y TW +++LEED
Sbjct: 288 TRFEKQFGTMNSVEDTVIGKRRIQYEEELAAQEAGGAPADYDTWFDYSRLEED 340
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 75/173 (43%), Gaps = 5/173 (2%)
Query: 168 RQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEY 227
R FE ++ + N W + +EA+ G +D+ + + + V P L E
Sbjct: 56 RSEFEDRLRRNGLNMSTWIKYASWEASQGEMDRCRSIYERALDVEPHHLPLWLRYTEQEL 115
Query: 228 KYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAA 287
K AR L+ RA I PR +W + +E GN+ R+++ER + E
Sbjct: 116 KMRNVQHARNLYDRAVSILPRIDQLWYKYVHLEELLGNIPGTRQVFERWMK----WEPEE 171
Query: 288 RCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRA 340
+ A+ LE R L A ++ + + W+ WA+ EED+GN +A
Sbjct: 172 KAWHAYINLEVRYDELDRASAIWERCVTCHPVPK-QWIRWAKFEEDRGNLEKA 223
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 90/221 (40%), Gaps = 12/221 (5%)
Query: 22 SKQSKVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARELFDASTVADKGHIA 81
+ Q ++ R+IY + P +W + E K+ N+ AR L+D +
Sbjct: 81 ASQGEMDRCRSIYERALDVEPHHLP-LWLRYTEQELKMRNVQHARNLYDRAVSILPRIDQ 139
Query: 82 AWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQAT 141
W+ + LE GNI RQ+ + +K+ E + LE + + ++A ++ +
Sbjct: 140 LWYKYVHLEELLGNIPGTRQVFERWMKW-EPEEKAWHAYINLEVRYDELDRASAIWERCV 198
Query: 142 KCNPKSCASWIAWSQMEMQQENNLAARQLFERAV-------QASPKNRFAWHVWGIFEAN 194
C+P WI W++ E + N AR +F+ A+ A K + + + E
Sbjct: 199 TCHP-VPKQWIRWAKFEEDRGNLEKARIVFQMALDYIGEDEDAMEKAQSVFTAFAKMETR 257
Query: 195 MGFIDKGKKLLKIGHAVNPRDPV--LLQSLALLEYKYSTAN 233
+ ++ + + K PR + S E ++ T N
Sbjct: 258 LKEYERARVIYKYALERLPRSKSEGIYSSYTRFEKQFGTMN 298
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 68/349 (19%), Positives = 139/349 (39%), Gaps = 56/349 (16%)
Query: 49 WQCWAVLENKLGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLK 108
W + LE + + +A +++ V W WA E +GN++KAR + L
Sbjct: 174 WHAYINLEVRYDELDRASAIWE-RCVTCHPVPKQWIRWAKFEEDRGNLEKARIVFQMALD 232
Query: 109 FCGGNE-------YIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQ 161
+ G +E ++ A +E + YE+AR +++ A + P+S + I S ++
Sbjct: 233 YIGEDEDAMEKAQSVFTAFAKMETRLKEYERARVIYKYALERLPRSKSEGIYSSYTRFEK 292
Query: 162 E----NNLAARQLFERAVQ-----------ASPKNRFAWHVWGIFE--ANMGFIDKGKKL 204
+ N++ + +R +Q +P + W + E A + G
Sbjct: 293 QFGTMNSVEDTVIGKRRIQYEEELAAQEAGGAPADYDTWFDYSRLEEDAYRALLATGGSQ 352
Query: 205 LKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLF---RRA--SEIDPR----------- 248
++ AV V +++A + + R +F R A EID R
Sbjct: 353 DQLQQAVKRVREVYERAIAQVPSSQEKRDWRRYIFLWLRYALFEEIDTRDYDRTREIYKA 412
Query: 249 ------HQ-----PVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLE 297
H+ +W+ + E + L AR++ A+ + + ++ LE
Sbjct: 413 AIALVPHRRFTFAKLWVQYARFEVRRLELTAARKILGAAIGMAPKL----KLFSSYIELE 468
Query: 298 QRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEIRNL 346
+ AR+++ +L + + TW+ +A+LE++ ++ RA + L
Sbjct: 469 VSLKEFDRARKIYEKALEWDPTNSQTWVRFAELEKNLFDTDRARALFEL 517
Score = 42.0 bits (97), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 59/286 (20%), Positives = 111/286 (38%), Gaps = 42/286 (14%)
Query: 14 YVALGKVLSKQSKVAEARAIYAKG-SQATQGENPYIWQCWAVLENKLGN--------IGK 64
+ A K+ ++ + AR IY + + ++ I+ + E + G IGK
Sbjct: 248 FTAFAKMETRLKEYERARVIYKYALERLPRSKSEGIYSSYTRFEKQFGTMNSVEDTVIGK 307
Query: 65 ARELFDASTVADK--GHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLAL 122
R ++ A + G A + W + + R LLA G G + + Q +
Sbjct: 308 RRIQYEEELAAQEAGGAPADYDTW--FDYSRLEEDAYRALLATG----GSQDQLQQAV-- 359
Query: 123 LEAKANRYEQARNLFRQATKCNPKSCAS---------WIAWSQME-MQQENNLAARQLFE 172
++ R ++ +A P S W+ ++ E + + R++++
Sbjct: 360 --------KRVREVYERAIAQVPSSQEKRDWRRYIFLWLRYALFEEIDTRDYDRTREIYK 411
Query: 173 RAVQASPKNRFA----WHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYK 228
A+ P RF W + FE + +K+L + P+ L S LE
Sbjct: 412 AAIALVPHRRFTFAKLWVQYARFEVRRLELTAARKILGAAIGMAPK-LKLFSSYIELEVS 470
Query: 229 YSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYE 274
+ ARK++ +A E DP + W+ + +E + D AR L+E
Sbjct: 471 LKEFDRARKIYEKALEWDPTNSQTWVRFAELEKNLFDTDRARALFE 516
Score = 42.0 bits (97), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 120/320 (37%), Gaps = 63/320 (19%)
Query: 46 PYIWQCWAVLENKLGNIGKARELF--------DASTVADKGHIAAWHGWAVLELRQGNIK 97
P W WA E GN+ KAR +F + +K + + +A +E R +
Sbjct: 204 PKQWIRWAKFEEDRGNLEKARIVFQMALDYIGEDEDAMEKAQ-SVFTAFAKMETRLKEYE 262
Query: 98 KARQLLAKGLKFC--GGNEYIYQTLALLEAK-------------ANRYEQARNLFRQATK 142
+AR + L+ +E IY + E + R + L Q
Sbjct: 263 RARVIYKYALERLPRSKSEGIYSSYTRFEKQFGTMNSVEDTVIGKRRIQYEEELAAQEAG 322
Query: 143 CNPKSCASWIAWSQMEMQQENNLAA---------------RQLFERAVQASPKNR----- 182
P +W +S++E L A R+++ERA+ P ++
Sbjct: 323 GAPADYDTWFDYSRLEEDAYRALLATGGSQDQLQQAVKRVREVYERAIAQVPSSQEKRDW 382
Query: 183 ----FAWHVWGIFEA-NMGFIDKGKKLLKIGHAVNPRDPVLLQSL----ALLEYKYSTAN 233
F W + +FE + D+ +++ K A+ P L A E +
Sbjct: 383 RRYIFLWLRYALFEEIDTRDYDRTREIYKAAIALVPHRRFTFAKLWVQYARFEVRRLELT 442
Query: 234 LARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAW 293
ARK+ A + P+ + ++ ++ +E D AR++YE+AL D T Q W
Sbjct: 443 AARKILGAAIGMAPKLK-LFSSYIELEVSLKEFDRARKIYEKALEWDPTNS------QTW 495
Query: 294 ---GVLEQRVGNLSAARRLF 310
LE+ + + AR LF
Sbjct: 496 VRFAELEKNLFDTDRARALF 515
Score = 41.6 bits (96), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/134 (21%), Positives = 66/134 (49%), Gaps = 6/134 (4%)
Query: 47 YIWQCWAVLEN-KLGNIGKARELFDAST--VADKGHIAA--WHGWAVLELRQGNIKKARQ 101
++W +A+ E + + RE++ A+ V + A W +A E+R+ + AR+
Sbjct: 387 FLWLRYALFEEIDTRDYDRTREIYKAAIALVPHRRFTFAKLWVQYARFEVRRLELTAARK 446
Query: 102 LLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQ 161
+L + + ++ + LE +++AR ++ +A + +P + +W+ ++++E
Sbjct: 447 ILGAAIGMAPKLK-LFSSYIELEVSLKEFDRARKIYEKALEWDPTNSQTWVRFAELEKNL 505
Query: 162 ENNLAARQLFERAV 175
+ AR LFE V
Sbjct: 506 FDTDRARALFELGV 519
Score = 33.1 bits (74), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 35/183 (19%), Positives = 76/183 (41%), Gaps = 12/183 (6%)
Query: 31 RAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARELFDASTVADKGHIAAWHGWAVLE 90
RA+ A G Q + + + V E + + ++E D + +I W +A+ E
Sbjct: 343 RALLATGGSQDQLQQA-VKRVREVYERAIAQVPSSQEKRDW-----RRYIFLWLRYALFE 396
Query: 91 -LRQGNIKKARQLLAKGLKFCGGNEYIYQTL----ALLEAKANRYEQARNLFRQATKCNP 145
+ + + R++ + + + L A E + AR + A P
Sbjct: 397 EIDTRDYDRTREIYKAAIALVPHRRFTFAKLWVQYARFEVRRLELTAARKILGAAIGMAP 456
Query: 146 KSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLL 205
K + ++ ++E+ + AR+++E+A++ P N W + E N+ D+ + L
Sbjct: 457 K-LKLFSSYIELEVSLKEFDRARKIYEKALEWDPTNSQTWVRFAELEKNLFDTDRARALF 515
Query: 206 KIG 208
++G
Sbjct: 516 ELG 518
>sp|O94906|PRP6_HUMAN Pre-mRNA-processing factor 6 OS=Homo sapiens GN=PRPF6 PE=1 SV=1
Length = 941
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 115/287 (40%), Gaps = 12/287 (4%)
Query: 60 GNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQT 119
G++ AR + + A+ W LE ++AR+LLAK + ++
Sbjct: 622 GDVPAARSILALAFQANPNSEEIWLAAVKLESENDEYERARRLLAKA-RSSAPTARVFMK 680
Query: 120 LALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASP 179
LE + A++L +A + W+ Q+E Q+E AR+ + + ++ P
Sbjct: 681 SVKLEWVQDNIRAAQDLCEEALRHYEDFPKLWMMKGQIEEQKEMMEKAREAYNQGLKKCP 740
Query: 180 KNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLF 239
+ W + E +G + + + +L+ NP++P L LEY+ N+A L
Sbjct: 741 HSTPLWLLLSRLEEKIGQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNIANTLM 800
Query: 240 RRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDS--TTESAARCLQAWGVLE 297
+A + P +W ++E + R S+D+ E L A L
Sbjct: 801 AKALQECPNSGILWSEAIFLEARP---------QRRTKSVDALKKCEHDPHVLLAVAKLF 851
Query: 298 QRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEIR 344
++ AR F ++ I+S W + + E G + EE+R
Sbjct: 852 WSQRKITKAREWFHRTVKIDSDLGDAWAFFYKFELQHGTEEQQEEVR 898
Score = 55.5 bits (132), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 97/220 (44%), Gaps = 15/220 (6%)
Query: 59 LGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQ 118
+ +I KAR L + + H AW A LE G ++ AR L+ KG + C +E ++
Sbjct: 288 INDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWL 347
Query: 119 TLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQAS 178
A L+ + A+ + QA + P+S +I +++E + A +++ +A++
Sbjct: 348 EAARLQPG----DTAKAVVAQAVRHLPQSVRIYIRAAELET---DIRAKKRVLRKALEHV 400
Query: 179 PKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKL 238
P + W E + + +L P L +LA LE T ARK+
Sbjct: 401 PNSVRLWKAAVELEEP----EDARIMLSRAVECCPTSVELWLALARLE----TYENARKV 452
Query: 239 FRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALS 278
+A E P + +WI +E GN ++ +RA++
Sbjct: 453 LNKARENIPTDRHIWITAAKLEEANGNTQMVEKIIDRAIT 492
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 91/201 (45%), Gaps = 13/201 (6%)
Query: 18 GKVLSKQSKVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARELFDASTVADK 77
G++ ++ + +AR Y +G + P +W + LE K+G + +AR + + S + +
Sbjct: 716 GQIEEQKEMMEKAREAYNQGLKKCPHSTP-LWLLLSRLEEKIGQLTRARAILEKSRLKNP 774
Query: 78 GHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLF 137
+ W LE R G A L+AK L+ C + ++ LEA+ R ++ +
Sbjct: 775 KNPGLWLESVRLEYRAGLKNIANTLMAKALQECPNSGILWSEAIFLEARPQRRTKSVDAL 834
Query: 138 RQATKC--NPKS--CASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVWGIFEA 193
+ KC +P + + WSQ ++ + AR+ F R V+ AW + FE
Sbjct: 835 K---KCEHDPHVLLAVAKLFWSQRKITK-----AREWFHRTVKIDSDLGDAWAFFYKFEL 886
Query: 194 NMGFIDKGKKLLKIGHAVNPR 214
G ++ +++ K + PR
Sbjct: 887 QHGTEEQQEEVRKRCESAEPR 907
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 86/216 (39%), Gaps = 4/216 (1%)
Query: 128 NRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHV 187
N E AR ++ A + P + W+ + E + L +RAV PK W +
Sbjct: 554 NALECARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVLWLM 613
Query: 188 WGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDP 247
+ G + + +L + NP + + LE + AR+L +A P
Sbjct: 614 GAKSKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENDEYERARRLLAKARSSAP 673
Query: 248 RHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQRVGNLSAAR 307
+ V++ +EW + N+ A++L E AL E + G +E++ + AR
Sbjct: 674 TAR-VFMKSVKLEWVQDNIRAAQDLCEEAL---RHYEDFPKLWMMKGQIEEQKEMMEKAR 729
Query: 308 RLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEI 343
+ L S W+ ++LEE G RA I
Sbjct: 730 EAYNQGLKKCPHSTPLWLLLSRLEEKIGQLTRARAI 765
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 93/220 (42%), Gaps = 4/220 (1%)
Query: 61 NIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTL 120
NI A++L + + + W +E ++ ++KAR+ +GLK C + ++ L
Sbjct: 690 NIRAAQDLCEEALRHYEDFPKLWMMKGQIEEQKEMMEKAREAYNQGLKKCPHSTPLWLLL 749
Query: 121 ALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPK 180
+ LE K + +AR + ++ NPK+ W+ ++E + A L +A+Q P
Sbjct: 750 SRLEEKIGQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNIANTLMAKALQECPN 809
Query: 181 NRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFR 240
+ W EA K LK DP +L ++A L + AR+ F
Sbjct: 810 SGILWSEAIFLEARPQRRTKSVDALKKCE----HDPHVLLAVAKLFWSQRKITKAREWFH 865
Query: 241 RASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSID 280
R +ID W + E + G + E+ +R S +
Sbjct: 866 RTVKIDSDLGDAWAFFYKFELQHGTEEQQEEVRKRCESAE 905
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 99/243 (40%), Gaps = 16/243 (6%)
Query: 99 ARQLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQME 158
AR + A L+ + ++ A E E L ++A PK+ W+ ++ +
Sbjct: 559 ARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVLWLMGAKSK 618
Query: 159 MQQENNLAARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVL 218
+ AAR + A QA+P + W E+ ++ ++LL + P V
Sbjct: 619 WLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENDEYERARRLLAKARSSAPTARVF 678
Query: 219 LQSLALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALS 278
++S+ LE+ A+ L A +W+ G +E ++ ++ ARE Y + L
Sbjct: 679 MKSVK-LEWVQDNIRAAQDLCEEALRHYEDFPKLWMMKGQIEEQKEMMEKAREAYNQGLK 737
Query: 279 IDSTTESAARCLQAWGV------LEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEE 332
+C + + LE+++G L+ AR + S N ++ W+ +LE
Sbjct: 738 ---------KCPHSTPLWLLLSRLEEKIGQLTRARAILEKSRLKNPKNPGLWLESVRLEY 788
Query: 333 DQG 335
G
Sbjct: 789 RAG 791
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 73/180 (40%), Gaps = 4/180 (2%)
Query: 166 AARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALL 225
AR ++ A+Q P + W FE N G + + LL+ A P+ VL A
Sbjct: 558 CARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVLWLMGAKS 617
Query: 226 EYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTES 285
++ AR + A + +P + +W+A +E + + AR L +A S T
Sbjct: 618 KWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENDEYERARRLLAKARSSAPT--- 674
Query: 286 AARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEIRN 345
AR LE N+ AA+ L +L WM Q+EE + +A E N
Sbjct: 675 -ARVFMKSVKLEWVQDNIRAAQDLCEEALRHYEDFPKLWMMKGQIEEQKEMMEKAREAYN 733
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 93/216 (43%), Gaps = 18/216 (8%)
Query: 128 NRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHV 187
N ++AR L + + NP +WIA +++E AR L + + PK+ W
Sbjct: 289 NDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVW-- 346
Query: 188 WGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDP 247
+ A + D K ++ P+ + A LE + +++ R+A E P
Sbjct: 347 --LEAARLQPGDTAKAVVAQAVRHLPQSVRIYIRAAELE---TDIRAKKRVLRKALEHVP 401
Query: 248 RHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQRVGNLSAAR 307
+W A +E E AR + RA+ T+ ++ W L + +A +
Sbjct: 402 NSVRLWKAAVELEEPE----DARIMLSRAVECCPTS------VELWLALARLETYENARK 451
Query: 308 RLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEI 343
L ++ NI + +I W+T A+LEE GN+ E+I
Sbjct: 452 VLNKARENIPTDRHI-WITAAKLEEANGNTQMVEKI 486
>sp|Q750X3|CLF1_ASHGO Pre-mRNA-splicing factor CLF1 OS=Ashbya gossypii (strain ATCC 10895
/ CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=CLF1 PE=3
SV=1
Length = 683
Score = 59.7 bits (143), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 80/177 (45%), Gaps = 5/177 (2%)
Query: 134 RNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVWGIFEA 193
R+ F +A K N W+ ++ E +Q + AR +FERA+ +P + W + E
Sbjct: 46 RSEFEEALKRNRLDVRQWLRYAAFEYEQRDMRRARSVFERALAVAPGDVVVWLRYVDCEL 105
Query: 194 NMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDPRHQPVW 253
++ + LL A+ PR L L+E L R ++ + ++P W
Sbjct: 106 RARDVNHARNLLVRATALLPRVDKLWYKYVLMEESLGQVELVRGVYTKWCTLEP-AAAAW 164
Query: 254 IAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQRVGNLSAARRLF 310
A+ E ++G ++ RE+Y R + + AA L+ W E++ G+ RR++
Sbjct: 165 DAFVDFETRQGQVEHVREVYSRYVMVHPV---AATWLK-WVAFERKHGDAGTVRRVY 217
Score = 52.4 bits (124), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 74/171 (43%), Gaps = 8/171 (4%)
Query: 168 RQLFERAV-QASPKNRF----AWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSL 222
R ++++ V + P +F AW ++ FE +DK +K+L + + P+ P L Q
Sbjct: 376 RSMYQKLVREVIPNTKFTFAKAWIMYAEFEIRQEKLDKARKILGMSLGMCPK-PKLFQYY 434
Query: 223 ALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDST 282
LE K + R+L + E P WI + +E G+ D AR +YE L+ D
Sbjct: 435 IDLEIKLKEFDRVRRLHEKLLEFQPDVLSNWIEYAELEENLGDEDRARGIYEIGLTADGG 494
Query: 283 TESA--ARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLE 331
A + +Q + E AR L+ + ++ W++ A E
Sbjct: 495 LSQARQLQLMQRYIQFETDASEFERARALYSRYVALSGYDPNVWISCALYE 545
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 62/148 (41%), Gaps = 2/148 (1%)
Query: 49 WQCWAVLENKLGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLK 108
W +A E + ++ +AR +F+ + G + W + ELR ++ AR LL +
Sbjct: 63 WLRYAAFEYEQRDMRRARSVFERALAVAPGDVVVWLRYVDCELRARDVNHARNLLVRATA 122
Query: 109 FCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAAR 168
+ ++ L+E + E R ++ + P + A+W A+ E +Q R
Sbjct: 123 LLPRVDKLWYKYVLMEESLGQVELVRGVYTKWCTLEP-AAAAWDAFVDFETRQGQVEHVR 181
Query: 169 QLFERAVQASPKNRFAWHVWGIFEANMG 196
+++ R V P W W FE G
Sbjct: 182 EVYSRYVMVHPVAA-TWLKWVAFERKHG 208
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 126/330 (38%), Gaps = 38/330 (11%)
Query: 49 WQCWAVLENKLGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLK 108
W + E + G + RE++ + V A W W E + G+ R++ +
Sbjct: 164 WDAFVDFETRQGQVEHVREVY-SRYVMVHPVAATWLKWVAFERKHGDAGTVRRVYSLACD 222
Query: 109 ----FCGGN----EYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQ 160
F G + E + + A EA E++R + A P+S A +Q+E +
Sbjct: 223 TLTAFAGADVHEVEQLVVSFAEWEATQQELERSRAVLSVAVSRWPESSTLKDATAQLEKK 282
Query: 161 QENNLAARQL-------FERAVQASPKNRFAWHVW-GIFEANMGFIDKGKKLLKIGHAVN 212
A + +E + A P + AW ++ + E + + AV
Sbjct: 283 FGGARAGESILFKRKREYEEQLLAHPLDYDAWWLYLDLLEESFPAELRAALAEATVKAV- 341
Query: 213 PRDP-----------VLLQSLALLEYKYSTANLARKLFRR-ASEIDPRHQ----PVWIAW 256
PR + L+ L LE ++L R ++++ E+ P + WI +
Sbjct: 342 PRSQEKDMQWRKYVNLWLRYLLFLETVLVDSDLTRSMYQKLVREVIPNTKFTFAKAWIMY 401
Query: 257 GWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQRVGNLSAARRLFRSSLNI 316
E ++ LD AR++ +L + + Q + LE ++ RRL L
Sbjct: 402 AEFEIRQEKLDKARKILGMSLGMCPK----PKLFQYYIDLEIKLKEFDRVRRLHEKLLEF 457
Query: 317 NSQSYITWMTWAQLEEDQGNSVRAEEIRNL 346
W+ +A+LEE+ G+ RA I +
Sbjct: 458 QPDVLSNWIEYAELEENLGDEDRARGIYEI 487
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 75/181 (41%), Gaps = 2/181 (1%)
Query: 64 KARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALL 123
+ R F+ + ++ + W +A E Q ++++AR + + L G+ ++
Sbjct: 44 RKRSEFEEALKRNRLDVRQWLRYAAFEYEQRDMRRARSVFERALAVAPGDVVVWLRYVDC 103
Query: 124 EAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRF 183
E +A ARNL +AT P+ W + ME R ++ + P
Sbjct: 104 ELRARDVNHARNLLVRATALLPRVDKLWYKYVLMEESLGQVELVRGVYTKWCTLEPAAA- 162
Query: 184 AWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRAS 243
AW + FE G ++ +++ V+P L+ +A E K+ A R+++ A
Sbjct: 163 AWDAFVDFETRQGQVEHVREVYSRYVMVHPVAATWLKWVA-FERKHGDAGTVRRVYSLAC 221
Query: 244 E 244
+
Sbjct: 222 D 222
Score = 34.7 bits (78), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 71/192 (36%), Gaps = 40/192 (20%)
Query: 23 KQSKVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARELFDASTVADKGHIAA 82
+Q K+ +AR I G P ++Q + LE KL + R L + ++
Sbjct: 407 RQEKLDKARKIL--GMSLGMCPKPKLFQYYIDLEIKLKEFDRVRRLHEKLLEFQPDVLSN 464
Query: 83 WHGWAVLELRQGNIKKARQLLAKGLKFCGG-----NEYIYQTLALLEAKANRYEQARNLF 137
W +A LE G+ +AR + GL GG + Q E A+ +E+AR L+
Sbjct: 465 WIEYAELEENLGDEDRARGIYEIGLTADGGLSQARQLQLMQRYIQFETDASEFERARALY 524
Query: 138 RQATKCNPKSCASWIAWS---------------------------------QMEMQQENN 164
+ + WI+ + + E+ +EN
Sbjct: 525 SRYVALSGYDPNVWISCALYESSVPTAAQVASYAHDQPNSDGDDSDDAYEQEFELTEENK 584
Query: 165 LAARQLFERAVQ 176
R +FE+A++
Sbjct: 585 EQTRAIFEKALR 596
>sp|Q91YR7|PRP6_MOUSE Pre-mRNA-processing factor 6 OS=Mus musculus GN=Prpf6 PE=2 SV=1
Length = 941
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/350 (21%), Positives = 127/350 (36%), Gaps = 45/350 (12%)
Query: 30 ARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARELFDASTVADKGHIAAWHGWAVL 89
ARAIYA Q + +W A E G L + W A
Sbjct: 559 ARAIYAYALQVFPSKK-SVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVLWLMGAKS 617
Query: 90 ELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKS-- 147
+ G++ AR +LA + +E I+ LE++ N YE+AR L +A P +
Sbjct: 618 KWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARV 677
Query: 148 --------------------CAS-----------WIAWSQMEMQQENNLAARQLFERAVQ 176
C W+ Q+E Q E AR+ + + ++
Sbjct: 678 FMKSVKLEWVLGNISAAQELCEEALRHYEDFPKLWMMKGQIEEQGELMEKAREAYNQGLK 737
Query: 177 ASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLAR 236
P + W + E +G + + + +L+ NP++P L LEY+ N+A
Sbjct: 738 KCPHSTPLWLLLSRLEEKIGQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNIAN 797
Query: 237 KLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDS--TTESAARCLQAWG 294
L +A + P +W ++E + + S+D+ E L A
Sbjct: 798 TLMAKALQECPNSGILWSEAVFLEARP---------QRKTKSVDALKKCEHDPHVLLAVA 848
Query: 295 VLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEIR 344
L ++ AR F ++ I+S W + + E G + EE+R
Sbjct: 849 KLFWSERKITKAREWFHRTVKIDSDLGDAWAFFYKFELQHGTEEQQEEVR 898
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 112/269 (41%), Gaps = 6/269 (2%)
Query: 8 PEDGRPYVALGKVLSKQSKVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARE 67
P ++A K+ S+ ++ AR + AK + ++ LE LGNI A+E
Sbjct: 639 PNSEEIWLAAVKLESENNEYERARRLLAKAR--SSAPTARVFMKSVKLEWVLGNISAAQE 696
Query: 68 LFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKA 127
L + + + W +E + ++KAR+ +GLK C + ++ L+ LE K
Sbjct: 697 LCEEALRHYEDFPKLWMMKGQIEEQGELMEKAREAYNQGLKKCPHSTPLWLLLSRLEEKI 756
Query: 128 NRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHV 187
+ +AR + ++ NPK+ W+ ++E + A L +A+Q P + W
Sbjct: 757 GQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNIANTLMAKALQECPNSGILWSE 816
Query: 188 WGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDP 247
EA K LK DP +L ++A L + AR+ F R +ID
Sbjct: 817 AVFLEARPQRKTKSVDALKKCE----HDPHVLLAVAKLFWSERKITKAREWFHRTVKIDS 872
Query: 248 RHQPVWIAWGWMEWKEGNLDTARELYERA 276
W + E + G + E+ +R
Sbjct: 873 DLGDAWAFFYKFELQHGTEEQQEEVRKRC 901
Score = 55.5 bits (132), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 97/220 (44%), Gaps = 15/220 (6%)
Query: 59 LGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQ 118
+ +I KAR L + + H AW A LE G ++ AR L+ KG + C +E ++
Sbjct: 288 INDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWL 347
Query: 119 TLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQAS 178
A L+ + A+ + QA + P+S +I +++E + A +++ +A++
Sbjct: 348 EAARLQPG----DTAKAVVAQAVRHLPQSVRIYIRAAELET---DIRAKKRVLRKALEHV 400
Query: 179 PKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKL 238
P + W E + + +L P L +LA LE T ARK+
Sbjct: 401 PNSVRLWKAAVELEEP----EDARIMLSRAVECCPTSVELWLALARLE----TYENARKV 452
Query: 239 FRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALS 278
+A E P + +WI +E GN ++ +RA++
Sbjct: 453 LNKARENIPTDRHIWITAAKLEEANGNTQMVEKIIDRAIT 492
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 87/216 (40%), Gaps = 4/216 (1%)
Query: 128 NRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHV 187
N E AR ++ A + P + W+ + E + L +RAV PK W +
Sbjct: 554 NALECARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVLWLM 613
Query: 188 WGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDP 247
+ G + + +L + NP + + LE + + AR+L +A P
Sbjct: 614 GAKSKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAP 673
Query: 248 RHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQRVGNLSAAR 307
+ V++ +EW GN+ A+EL E AL E + G +E++ + AR
Sbjct: 674 TAR-VFMKSVKLEWVLGNISAAQELCEEAL---RHYEDFPKLWMMKGQIEEQGELMEKAR 729
Query: 308 RLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEI 343
+ L S W+ ++LEE G RA I
Sbjct: 730 EAYNQGLKKCPHSTPLWLLLSRLEEKIGQLTRARAI 765
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 89/201 (44%), Gaps = 13/201 (6%)
Query: 18 GKVLSKQSKVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARELFDASTVADK 77
G++ + + +AR Y +G + P +W + LE K+G + +AR + + S + +
Sbjct: 716 GQIEEQGELMEKAREAYNQGLKKCPHSTP-LWLLLSRLEEKIGQLTRARAILEKSRLKNP 774
Query: 78 GHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLF 137
+ W LE R G A L+AK L+ C + ++ LEA+ R ++ +
Sbjct: 775 KNPGLWLESVRLEYRAGLKNIANTLMAKALQECPNSGILWSEAVFLEARPQRKTKSVDAL 834
Query: 138 RQATKC--NPKS--CASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVWGIFEA 193
+ KC +P + + WS+ ++ + AR+ F R V+ AW + FE
Sbjct: 835 K---KCEHDPHVLLAVAKLFWSERKITK-----AREWFHRTVKIDSDLGDAWAFFYKFEL 886
Query: 194 NMGFIDKGKKLLKIGHAVNPR 214
G ++ +++ K PR
Sbjct: 887 QHGTEEQQEEVRKRCENAEPR 907
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 79/184 (42%), Gaps = 7/184 (3%)
Query: 166 AARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALL 225
AR ++ A+Q P + W FE N G + + LL+ A P+ VL A
Sbjct: 558 CARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVLWLMGAKS 617
Query: 226 EYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTES 285
++ AR + A + +P + +W+A +E + + AR L +A S T
Sbjct: 618 KWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPT--- 674
Query: 286 AARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEIRN 345
AR LE +GN+SAA+ L +L WM Q+EE QG + E+ R
Sbjct: 675 -ARVFMKSVKLEWVLGNISAAQELCEEALRHYEDFPKLWMMKGQIEE-QGELM--EKARE 730
Query: 346 LYFQ 349
Y Q
Sbjct: 731 AYNQ 734
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 93/216 (43%), Gaps = 18/216 (8%)
Query: 128 NRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHV 187
N ++AR L + + NP +WIA +++E AR L + + PK+ W
Sbjct: 289 NDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVW-- 346
Query: 188 WGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDP 247
+ A + D K ++ P+ + A LE + +++ R+A E P
Sbjct: 347 --LEAARLQPGDTAKAVVAQAVRHLPQSVRIYIRAAELE---TDIRAKKRVLRKALEHVP 401
Query: 248 RHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQRVGNLSAAR 307
+W A +E E AR + RA+ T+ ++ W L + +A +
Sbjct: 402 NSVRLWKAAVELEEPE----DARIMLSRAVECCPTS------VELWLALARLETYENARK 451
Query: 308 RLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEI 343
L ++ NI + +I W+T A+LEE GN+ E+I
Sbjct: 452 VLNKARENIPTDRHI-WITAAKLEEANGNTQMVEKI 486
>sp|A1A5S1|PRP6_RAT Pre-mRNA-processing factor 6 OS=Rattus norvegicus GN=Prpf6 PE=2
SV=1
Length = 941
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/350 (21%), Positives = 127/350 (36%), Gaps = 45/350 (12%)
Query: 30 ARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARELFDASTVADKGHIAAWHGWAVL 89
ARAIYA Q + +W A E G L + W A
Sbjct: 559 ARAIYAYALQVFPSKK-SVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVLWLMGAKS 617
Query: 90 ELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKS-- 147
+ G++ AR +LA + +E I+ LE++ N YE+AR L +A P +
Sbjct: 618 KWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARV 677
Query: 148 --------------------CAS-----------WIAWSQMEMQQENNLAARQLFERAVQ 176
C W+ Q+E Q E AR+ + + ++
Sbjct: 678 FMKSVKLEWVLGNITAAQELCEEALRHYEDFPKLWMMKGQIEEQGELMERAREAYNQGLK 737
Query: 177 ASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLAR 236
P + W + E +G + + + +L+ NP++P L LEY+ N+A
Sbjct: 738 KCPHSTPLWLLLSRLEEKIGQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNIAN 797
Query: 237 KLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDS--TTESAARCLQAWG 294
L +A + P +W ++E + + S+D+ E L A
Sbjct: 798 TLMAKALQECPNSGILWSEAVFLEARP---------QRKTKSVDALKKCEHDPHVLLAVA 848
Query: 295 VLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEIR 344
L ++ AR F ++ I+S W + + E G + EE+R
Sbjct: 849 KLFWSERKITKAREWFHRTVKIDSDLGDAWAFFYKFELQHGTEEQQEEVR 898
Score = 55.5 bits (132), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 97/220 (44%), Gaps = 15/220 (6%)
Query: 59 LGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQ 118
+ +I KAR L + + H AW A LE G ++ AR L+ KG + C +E ++
Sbjct: 288 INDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWL 347
Query: 119 TLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQAS 178
A L+ + A+ + QA + P+S +I +++E + A +++ +A++
Sbjct: 348 EAARLQPG----DTAKAVVAQAVRHLPQSVRIYIRAAELET---DIRAKKRVLRKALEHV 400
Query: 179 PKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKL 238
P + W E + + +L P L +LA LE T ARK+
Sbjct: 401 PNSVRLWKAAVELEEP----EDARIMLSRAVECCPTSVELWLALARLE----TYENARKV 452
Query: 239 FRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALS 278
+A E P + +WI +E GN ++ +RA++
Sbjct: 453 LNKARENIPTDRHIWITAAKLEEANGNTQMVEKIIDRAIT 492
Score = 55.5 bits (132), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 112/269 (41%), Gaps = 6/269 (2%)
Query: 8 PEDGRPYVALGKVLSKQSKVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARE 67
P ++A K+ S+ ++ AR + AK + ++ LE LGNI A+E
Sbjct: 639 PNSEEIWLAAVKLESENNEYERARRLLAKAR--SSAPTARVFMKSVKLEWVLGNITAAQE 696
Query: 68 LFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKA 127
L + + + W +E + +++AR+ +GLK C + ++ L+ LE K
Sbjct: 697 LCEEALRHYEDFPKLWMMKGQIEEQGELMERAREAYNQGLKKCPHSTPLWLLLSRLEEKI 756
Query: 128 NRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHV 187
+ +AR + ++ NPK+ W+ ++E + A L +A+Q P + W
Sbjct: 757 GQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNIANTLMAKALQECPNSGILWSE 816
Query: 188 WGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDP 247
EA K LK DP +L ++A L + AR+ F R +ID
Sbjct: 817 AVFLEARPQRKTKSVDALKKCE----HDPHVLLAVAKLFWSERKITKAREWFHRTVKIDS 872
Query: 248 RHQPVWIAWGWMEWKEGNLDTARELYERA 276
W + E + G + E+ +R
Sbjct: 873 DLGDAWAFFYKFELQHGTEEQQEEVRKRC 901
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 87/216 (40%), Gaps = 4/216 (1%)
Query: 128 NRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHV 187
N E AR ++ A + P + W+ + E + L +RAV PK W +
Sbjct: 554 NALECARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVLWLM 613
Query: 188 WGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDP 247
+ G + + +L + NP + + LE + + AR+L +A P
Sbjct: 614 GAKSKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAP 673
Query: 248 RHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQRVGNLSAAR 307
+ V++ +EW GN+ A+EL E AL E + G +E++ + AR
Sbjct: 674 TAR-VFMKSVKLEWVLGNITAAQELCEEAL---RHYEDFPKLWMMKGQIEEQGELMERAR 729
Query: 308 RLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEI 343
+ L S W+ ++LEE G RA I
Sbjct: 730 EAYNQGLKKCPHSTPLWLLLSRLEEKIGQLTRARAI 765
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 88/201 (43%), Gaps = 13/201 (6%)
Query: 18 GKVLSKQSKVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARELFDASTVADK 77
G++ + + AR Y +G + P +W + LE K+G + +AR + + S + +
Sbjct: 716 GQIEEQGELMERAREAYNQGLKKCPHSTP-LWLLLSRLEEKIGQLTRARAILEKSRLKNP 774
Query: 78 GHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLF 137
+ W LE R G A L+AK L+ C + ++ LEA+ R ++ +
Sbjct: 775 KNPGLWLESVRLEYRAGLKNIANTLMAKALQECPNSGILWSEAVFLEARPQRKTKSVDAL 834
Query: 138 RQATKC--NPKS--CASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVWGIFEA 193
+ KC +P + + WS+ ++ + AR+ F R V+ AW + FE
Sbjct: 835 K---KCEHDPHVLLAVAKLFWSERKITK-----AREWFHRTVKIDSDLGDAWAFFYKFEL 886
Query: 194 NMGFIDKGKKLLKIGHAVNPR 214
G ++ +++ K PR
Sbjct: 887 QHGTEEQQEEVRKRCENAEPR 907
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 75/180 (41%), Gaps = 4/180 (2%)
Query: 166 AARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALL 225
AR ++ A+Q P + W FE N G + + LL+ A P+ VL A
Sbjct: 558 CARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVLWLMGAKS 617
Query: 226 EYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTES 285
++ AR + A + +P + +W+A +E + + AR L +A S T
Sbjct: 618 KWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPT--- 674
Query: 286 AARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEIRN 345
AR LE +GN++AA+ L +L WM Q+EE RA E N
Sbjct: 675 -ARVFMKSVKLEWVLGNITAAQELCEEALRHYEDFPKLWMMKGQIEEQGELMERAREAYN 733
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 93/216 (43%), Gaps = 18/216 (8%)
Query: 128 NRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHV 187
N ++AR L + + NP +WIA +++E AR L + + PK+ W
Sbjct: 289 NDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVW-- 346
Query: 188 WGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDP 247
+ A + D K ++ P+ + A LE + +++ R+A E P
Sbjct: 347 --LEAARLQPGDTAKAVVAQAVRHLPQSVRIYIRAAELE---TDIRAKKRVLRKALEHVP 401
Query: 248 RHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQRVGNLSAAR 307
+W A +E E AR + RA+ T+ ++ W L + +A +
Sbjct: 402 NSVRLWKAAVELEEPE----DARIMLSRAVECCPTS------VELWLALARLETYENARK 451
Query: 308 RLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEI 343
L ++ NI + +I W+T A+LEE GN+ E+I
Sbjct: 452 VLNKARENIPTDRHI-WITAAKLEEANGNTQMVEKI 486
>sp|Q2KJJ0|PRP6_BOVIN Pre-mRNA-processing factor 6 OS=Bos taurus GN=PRPF6 PE=2 SV=1
Length = 941
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 111/315 (35%), Gaps = 64/315 (20%)
Query: 30 ARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARELFDASTVADKGHIAAWHGWAVL 89
ARAIYA Q + +W A E G L + W A
Sbjct: 559 ARAIYAYALQVFPSKK-SVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVLWLMGAKS 617
Query: 90 ELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKS-- 147
+ G++ AR +LA + +E I+ LE++ N YE+AR L +A P +
Sbjct: 618 KWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARV 677
Query: 148 --------------------CAS-----------WIAWSQMEMQQENNLAARQLFERAVQ 176
C W+ Q+E Q+E AR+ + + ++
Sbjct: 678 FMKSVKLEWVLGNLVAAQELCEEALKHYEDFPKLWMMKGQIEEQEELVEKAREAYNQGLK 737
Query: 177 ASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLAR 236
P + W + E +G + + + +L+ NP++P L LEY+ N+A
Sbjct: 738 KCPHSTPLWLLLSRLEEKVGQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNIAS 797
Query: 237 KLFRRASEIDP-----------------------------RHQP-VWIAWGWMEWKEGNL 266
L +A + P H P V +A + W E +
Sbjct: 798 TLMAKALQECPNSGVLWSEAIFLEARPQRKTKSVDALKKCEHDPHVLLAVAKLFWSERKI 857
Query: 267 DTARELYERALSIDS 281
ARE + R + IDS
Sbjct: 858 TKAREWFHRTVKIDS 872
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 97/220 (44%), Gaps = 15/220 (6%)
Query: 59 LGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQ 118
+ +I KAR L + + H AW A LE G ++ AR L+ KG + C +E ++
Sbjct: 288 INDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWL 347
Query: 119 TLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQAS 178
A L+ + A+ + QA + P+S +I +++E + A +++ +A++
Sbjct: 348 EAARLQPG----DTAKAVVAQAVRHLPQSVRIYIRAAELET---DIRAKKRVLRKALEHV 400
Query: 179 PKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKL 238
P + W E + + +L P L +LA LE T ARK+
Sbjct: 401 PNSVRLWKAAVELEEP----EDARIMLSRAVECCPTSVELWLALARLE----TYENARKV 452
Query: 239 FRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALS 278
+A E P + +WI +E GN ++ +RA++
Sbjct: 453 LNKARENIPTDRHIWITAAKLEEANGNTQMVEKIIDRAIT 492
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 87/216 (40%), Gaps = 4/216 (1%)
Query: 128 NRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHV 187
N E AR ++ A + P + W+ + E + L +RAV PK W +
Sbjct: 554 NALECARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVLWLM 613
Query: 188 WGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDP 247
+ G + + +L + NP + + LE + + AR+L +A P
Sbjct: 614 GAKSKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAP 673
Query: 248 RHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQRVGNLSAAR 307
+ V++ +EW GNL A+EL E AL E + G +E++ + AR
Sbjct: 674 TAR-VFMKSVKLEWVLGNLVAAQELCEEAL---KHYEDFPKLWMMKGQIEEQEELVEKAR 729
Query: 308 RLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEI 343
+ L S W+ ++LEE G RA I
Sbjct: 730 EAYNQGLKKCPHSTPLWLLLSRLEEKVGQLTRARAI 765
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 108/258 (41%), Gaps = 6/258 (2%)
Query: 8 PEDGRPYVALGKVLSKQSKVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARE 67
P ++A K+ S+ ++ AR + AK + ++ LE LGN+ A+E
Sbjct: 639 PNSEEIWLAAVKLESENNEYERARRLLAKAR--SSAPTARVFMKSVKLEWVLGNLVAAQE 696
Query: 68 LFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKA 127
L + + + W +E ++ ++KAR+ +GLK C + ++ L+ LE K
Sbjct: 697 LCEEALKHYEDFPKLWMMKGQIEEQEELVEKAREAYNQGLKKCPHSTPLWLLLSRLEEKV 756
Query: 128 NRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHV 187
+ +AR + ++ NPK+ W+ ++E + A L +A+Q P + W
Sbjct: 757 GQLTRARAILEKSRLKNPKNPGLWLESVRLEYRAGLKNIASTLMAKALQECPNSGVLWSE 816
Query: 188 WGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDP 247
EA K LK DP +L ++A L + AR+ F R +ID
Sbjct: 817 AIFLEARPQRKTKSVDALKKCE----HDPHVLLAVAKLFWSERKITKAREWFHRTVKIDS 872
Query: 248 RHQPVWIAWGWMEWKEGN 265
W + E + G
Sbjct: 873 DLGDAWAFFYKFELQHGT 890
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 75/179 (41%), Gaps = 4/179 (2%)
Query: 167 ARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLE 226
AR ++ A+Q P + W FE N G + + LL+ A P+ VL A +
Sbjct: 559 ARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVLWLMGAKSK 618
Query: 227 YKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESA 286
+ AR + A + +P + +W+A +E + + AR L +A S T
Sbjct: 619 WLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPT---- 674
Query: 287 ARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEIRN 345
AR LE +GNL AA+ L +L WM Q+EE + +A E N
Sbjct: 675 ARVFMKSVKLEWVLGNLVAAQELCEEALKHYEDFPKLWMMKGQIEEQEELVEKAREAYN 733
Score = 48.9 bits (115), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 101/243 (41%), Gaps = 16/243 (6%)
Query: 99 ARQLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQME 158
AR + A L+ + ++ A E E L ++A PK+ W+ ++ +
Sbjct: 559 ARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVLWLMGAKSK 618
Query: 159 MQQENNLAARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVL 218
+ AAR + A QA+P + W E+ ++ ++LL + P V
Sbjct: 619 WLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVF 678
Query: 219 LQSLALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALS 278
++S+ LE+ A++L A + +W+ G +E +E ++ ARE Y + L
Sbjct: 679 MKSVK-LEWVLGNLVAAQELCEEALKHYEDFPKLWMMKGQIEEQEELVEKAREAYNQGLK 737
Query: 279 IDSTTESAARCLQAWGV------LEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEE 332
+C + + LE++VG L+ AR + S N ++ W+ +LE
Sbjct: 738 ---------KCPHSTPLWLLLSRLEEKVGQLTRARAILEKSRLKNPKNPGLWLESVRLEY 788
Query: 333 DQG 335
G
Sbjct: 789 RAG 791
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 93/216 (43%), Gaps = 18/216 (8%)
Query: 128 NRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHV 187
N ++AR L + + NP +WIA +++E AR L + + PK+ W
Sbjct: 289 NDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVW-- 346
Query: 188 WGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDP 247
+ A + D K ++ P+ + A LE + +++ R+A E P
Sbjct: 347 --LEAARLQPGDTAKAVVAQAVRHLPQSVRIYIRAAELE---TDIRAKKRVLRKALEHVP 401
Query: 248 RHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQRVGNLSAAR 307
+W A +E E AR + RA+ T+ ++ W L + +A +
Sbjct: 402 NSVRLWKAAVELEEPED----ARIMLSRAVECCPTS------VELWLALARLETYENARK 451
Query: 308 RLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEI 343
L ++ NI + +I W+T A+LEE GN+ E+I
Sbjct: 452 VLNKARENIPTDRHI-WITAAKLEEANGNTQMVEKI 486
Score = 42.7 bits (99), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/198 (20%), Positives = 75/198 (37%), Gaps = 31/198 (15%)
Query: 18 GKVLSKQSKVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARELFDASTVADK 77
G++ ++ V +AR Y +G + P +W + LE K+G + +AR + + S + +
Sbjct: 716 GQIEEQEELVEKAREAYNQGLKKCPHSTP-LWLLLSRLEEKVGQLTRARAILEKSRLKNP 774
Query: 78 GHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKANR-------- 129
+ W LE R G A L+AK L+ C + ++ LEA+ R
Sbjct: 775 KNPGLWLESVRLEYRAGLKNIASTLMAKALQECPNSGVLWSEAIFLEARPQRKTKSVDAL 834
Query: 130 ----------------------YEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAA 167
+AR F + K + +W + + E+Q
Sbjct: 835 KKCEHDPHVLLAVAKLFWSERKITKAREWFHRTVKIDSDLGDAWAFFYKFELQHGTEEQR 894
Query: 168 RQLFERAVQASPKNRFAW 185
++ R A P++ W
Sbjct: 895 EEVRRRCENAEPRHGELW 912
Score = 40.4 bits (93), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 53/258 (20%), Positives = 103/258 (39%), Gaps = 25/258 (9%)
Query: 99 ARQLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQME 158
AR +L++ ++ C + ++ LA LE YE AR + +A + P WI +++E
Sbjct: 419 ARIMLSRAVECCPTSVELWLALARLET----YENARKVLNKARENIPTDRHIWITAAKLE 474
Query: 159 MQQENNLAARQLFERAVQA-----SPKNRFAWHVWGIFEANMGFIDKGKKLLK--IGHAV 211
N ++ +RA+ + NR W G + + +++ IG +
Sbjct: 475 EANGNTQMVEKIIDRAITSLRANGVEINREQWIQDAEECDKAGSVATCQAVMRAVIGIGI 534
Query: 212 NPRDPVLLQSLALLE-----YKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNL 266
D + +E ++ AR ++ A ++ P + VW+ + E G
Sbjct: 535 EEED----RKHTWMEDADSCVAHNALECARAIYAYALQVFPSKKSVWLRAAYFEKNHGTR 590
Query: 267 DTARELYERALSIDSTTESAARCLQAWGVLEQ-RVGNLSAARRLFRSSLNINSQSYITWM 325
++ L +RA++ E L G + G++ AAR + + N S W+
Sbjct: 591 ESLEALLQRAVAHCPKAE----VLWLMGAKSKWLAGDVPAARSILALAFQANPNSEEIWL 646
Query: 326 TWAQLEEDQGNSVRAEEI 343
+LE + RA +
Sbjct: 647 AAVKLESENNEYERARRL 664
>sp|Q54VF4|Y8236_DICDI TPR-containing protein DDB_G0280363 OS=Dictyostelium discoideum
GN=DDB_G0280363 PE=4 SV=2
Length = 1304
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 107/263 (40%), Gaps = 42/263 (15%)
Query: 56 ENKLGNIGKARELFDASTVADKGHIAAWHG---WAVLELRQGNIKKARQLLAKGLKFCGG 112
E K+ N+ AR L S + D+ W +LE R GNI AR++ +K
Sbjct: 847 EEKMDNLEGARALL--SQLRDQSIYKTWRAVMEGGLLEARAGNIDVARKIFKYLMKHVPW 904
Query: 113 NEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNL--AARQL 170
IYQ LE + YE+A N+ + +PK W + ++ + + + R
Sbjct: 905 YGPIYQEAYKLEERCEEYERAINIVEKGLFEDPKYGPLWFSALRLYEKTSHGFLQSTRNT 964
Query: 171 FERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYS 230
ERA QA + W ++ FEA A +E +
Sbjct: 965 VERARQAVSR-EVTWKIY--FEA-----------------------------AQIEERSK 992
Query: 231 TANLARKLFRRASEIDPRHQ--PVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAAR 288
L+R + ++ E+ P + VW+ E N+ AR+L RAL + ++ +
Sbjct: 993 NLTLSRAAYVKSVELCPENLLWKVWLGGSRTELNADNICIARKLVFRALE-EVPSKLRSL 1051
Query: 289 CLQAWGVLEQRVGNLSAARRLFR 311
L + LE+ GN++ +RR+ +
Sbjct: 1052 VLLEYSRLEEYAGNINKSRRILK 1074
Score = 40.8 bits (94), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 58/129 (44%), Gaps = 1/129 (0%)
Query: 52 WAVLENKLGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCG 111
++ LE GNI K+R + + V + + +LE+R N + A + + LK
Sbjct: 1056 YSRLEEYAGNINKSRRILKMAHVEARLDWKVFLESVLLEMRANNYEAAIKEAKESLKIHS 1115
Query: 112 GNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLF 171
G ++ L L Q N+F++A + PKS W +++ + AR+
Sbjct: 1116 GAGRLWAALIQLNQLKGVKSQL-NVFKKALQFVPKSGEVWCEGARIALNNNELREARRFL 1174
Query: 172 ERAVQASPK 180
E A+Q +P+
Sbjct: 1175 EFAIQFTPQ 1183
Score = 38.9 bits (89), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 101/276 (36%), Gaps = 39/276 (14%)
Query: 116 IYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAV 175
+Y LA L + N + AR +R+ T P W+ +++ME +++ + +
Sbjct: 771 VYLELADLANRQNNLKLARKFYRKVTSTQPYISQGWLEYAKMEEDYGRLEKCQKILQLGL 830
Query: 176 QASPKN-----------------------------RFAWHVW------GIFEANMGFIDK 200
+ P N + + W G+ EA G ID
Sbjct: 831 KHCPFNESLLIKGIRHEEKMDNLEGARALLSQLRDQSIYKTWRAVMEGGLLEARAGNIDV 890
Query: 201 GKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWME 260
+K+ K P + Q LE + A + + DP++ P+W + +
Sbjct: 891 ARKIFKYLMKHVPWYGPIYQEAYKLEERCEEYERAINIVEKGLFEDPKYGPLWFSALRLY 950
Query: 261 WK--EGNLDTARELYERALSIDSTTESAARCLQAWGVLEQRVGNLSAARRLFRSSLNINS 318
K G L + R ERA S + +A +E+R NL+ +R + S+ +
Sbjct: 951 EKTSHGFLQSTRNTVERARQAVSREVTWKIYFEA-AQIEERSKNLTLSRAAYVKSVELCP 1009
Query: 319 QSYITWMTWAQLEEDQGNSVRAEEIRNLYFQQRTEV 354
++ + W W + N+ R L F+ EV
Sbjct: 1010 EN-LLWKVWLGGSRTELNADNICIARKLVFRALEEV 1044
>sp|Q6FW76|CLF1_CANGA Pre-mRNA-splicing factor CLF1 OS=Candida glabrata (strain ATCC 2001
/ CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=CLF1
PE=3 SV=1
Length = 695
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 67/148 (45%), Gaps = 2/148 (1%)
Query: 49 WQCWAVLENKLGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLK 108
W +AV E + ++ +AR +F+ + ++ W + EL+ G I AR +L + +
Sbjct: 64 WMRYAVFEIEQHDMRRARSIFERALRVHISYVPLWIRYIESELKLGYINHARNILERAIT 123
Query: 109 FCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAAR 168
+ ++ ++E ++ RNLF++ P + W +++ E++QE R
Sbjct: 124 KLPRVDKLWYKYLIVEESLAHFDIVRNLFQKWCSLEP-AAHVWDSFTDFEVRQERYEDVR 182
Query: 169 QLFERAVQASPKNRFAWHVWGIFEANMG 196
++ + V P+ W W FE G
Sbjct: 183 NIYSKYVLIHPQFS-TWRKWINFEVRYG 209
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/193 (20%), Positives = 82/193 (42%), Gaps = 5/193 (2%)
Query: 123 LEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNR 182
LE + + R F K N W+ ++ E++Q + AR +FERA++
Sbjct: 36 LEELKDVQRRKRTEFEGYLKRNRLDVKQWMRYAVFEIEQHDMRRARSIFERALRVHISYV 95
Query: 183 FAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRA 242
W + E +G+I+ + +L+ PR L ++E + ++ R LF++
Sbjct: 96 PLWIRYIESELKLGYINHARNILERAITKLPRVDKLWYKYLIVEESLAHFDIVRNLFQKW 155
Query: 243 SEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQRVGN 302
++P VW ++ E ++ + R +Y + + I + + W E R G+
Sbjct: 156 CSLEPAAH-VWDSFTDFEVRQERYEDVRNIYSKYVLIHPQFSTWRK----WINFEVRYGS 210
Query: 303 LSAARRLFRSSLN 315
R ++ +L+
Sbjct: 211 TKTVRSVYSLALD 223
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 100/238 (42%), Gaps = 12/238 (5%)
Query: 83 WHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATK 142
W +A E+RQ N++KAR +L + L C + ++ LE K +++ R L+ K
Sbjct: 403 WILYAEFEIRQDNLEKARSILGRSLGLCPKRK-TFKYYIDLETKLREFDRVRILYENFLK 461
Query: 143 CNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASP---KNRFAWHVWGI---FEANMG 196
+P + +W A+ + E + + R + +Q + F H+ I +E
Sbjct: 462 FDPLNLDTWRAYVEFEDSLGDEVRVRSVCMIPIQNNIGLFSKSFQLHLLEILIDYEMEYQ 521
Query: 197 FIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLAR--KLFRRASEIDPRHQPVWI 254
D + LLK ++ A+ + T + ++ + D
Sbjct: 522 NFDNIEPLLKKQVELSNFTVEAWTDYAMKKLTVPTEEQVQNFQIMKEERLKDSSALDEQE 581
Query: 255 AWGWMEWKEGNLDTARELYERALSIDSTT---ESAARCLQAWGVLEQRVGNLSAARRL 309
E + N D AR+++ERAL+ E AR LQ++ E + G++S+ +R+
Sbjct: 582 IEFEFEITDNNKDNARDVFERALNYFKEIKRDEDRARILQSYVDFEGQYGDISSRQRI 639
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 68/157 (43%), Gaps = 2/157 (1%)
Query: 121 ALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPK 180
A+ E + + +AR++F +A + + WI + + E++ AR + ERA+ P+
Sbjct: 68 AVFEIEQHDMRRARSIFERALRVHISYVPLWIRYIESELKLGYINHARNILERAITKLPR 127
Query: 181 NRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFR 240
W+ + I E ++ D + L + ++ P V S E + R ++
Sbjct: 128 VDKLWYKYLIVEESLAHFDIVRNLFQKWCSLEPAAHV-WDSFTDFEVRQERYEDVRNIYS 186
Query: 241 RASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERAL 277
+ I P+ W W E + G+ T R +Y AL
Sbjct: 187 KYVLIHPQF-STWRKWINFEVRYGSTKTVRSVYSLAL 222
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 61/128 (47%), Gaps = 13/128 (10%)
Query: 223 ALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDST 282
A+ E + AR +F RA + + P+WI + E K G ++ AR + ERA++
Sbjct: 68 AVFEIEQHDMRRARSIFERALRVHISYVPLWIRYIESELKLGYINHARNILERAIT---- 123
Query: 283 TESAARCLQAWG---VLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVR 339
R + W ++E+ + + R LF+ ++ +++ W ++ E Q R
Sbjct: 124 --KLPRVDKLWYKYLIVEESLAHFDIVRNLFQKWCSLEPAAHV-WDSFTDFEVRQE---R 177
Query: 340 AEEIRNLY 347
E++RN+Y
Sbjct: 178 YEDVRNIY 185
Score = 37.0 bits (84), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/98 (21%), Positives = 43/98 (43%), Gaps = 4/98 (4%)
Query: 246 DPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQRVGNLSA 305
D +WI + E ++ NL+ AR + R+L + + + + LE ++
Sbjct: 396 DFTFSKIWILYAEFEIRQDNLEKARSILGRSLGLC----PKRKTFKYYIDLETKLREFDR 451
Query: 306 ARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEI 343
R L+ + L + + TW + + E+ G+ VR +
Sbjct: 452 VRILYENFLKFDPLNLDTWRAYVEFEDSLGDEVRVRSV 489
>sp|Q58741|Y1345_METJA TPR repeat-containing protein MJ1345 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ1345 PE=4 SV=1
Length = 314
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 106/270 (39%), Gaps = 34/270 (12%)
Query: 44 ENPYIWQCWAVLENKLGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLL 103
E+P ++ A + LG KA E FD + +I A L + G +++A+++
Sbjct: 43 ESPDVYVRKARILRTLGENDKALEYFDKALKLKPKYILANFLKGALLVSLGKLEEAKEVF 102
Query: 104 AKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQEN 163
K + + + A + K Y+ A + + K PKS +W ++ ++
Sbjct: 103 LKLCRLEKSDLPVKYVTAFILKKLGEYDYALKIIDKILKKYPKSAIAWAEKGEILYREGK 162
Query: 164 NLAARQLFERAVQASPKN----------RFAWHVWG--------IFEAN----------- 194
+ + F+ A++ +PK+ F +G +FE N
Sbjct: 163 LKKSLECFDNALKINPKDCQSLLYKGEILFKLGRYGEALKCLKKVFERNNKDIRALMYII 222
Query: 195 -----MGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDPRH 249
+G +++ + K +NP DP+L ++ K N A K F + EI+P
Sbjct: 223 QILIYLGRLNQALEYTKKALKLNPDDPLLYLYKGIILNKLGKYNEAIKYFDKVLEINPNI 282
Query: 250 QPVWIAWGWMEWKEGNLDTARELYERALSI 279
W K G ++ A E Y RAL I
Sbjct: 283 PDAWNGKAIALEKLGKINEAIECYNRALDI 312
>sp|P81436|OGT1_RABIT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110 kDa subunit OS=Oryctolagus cuniculus GN=OGT PE=1
SV=2
Length = 1046
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/295 (20%), Positives = 116/295 (39%), Gaps = 6/295 (2%)
Query: 44 ENPYIWQCWAVLEN---KLGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKAR 100
+NP + + ++ L N + G + +A E + + I + A + G+++ A
Sbjct: 84 QNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAV 143
Query: 101 QLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQ 160
Q L++ + L L R E+A+ + +A + P +W +
Sbjct: 144 QAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNA 203
Query: 161 QENNLAARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQ 220
Q A FE+AV P A+ G D+ +++P V+
Sbjct: 204 QGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHG 263
Query: 221 SLALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSID 280
+LA + Y+ +LA +RRA E+ P + ++G++ A + Y AL +
Sbjct: 264 NLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLC 323
Query: 281 STTESAARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQG 335
T A L +++ GN+ A RL+R +L + + A + + QG
Sbjct: 324 PTH---ADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQG 375
Score = 37.7 bits (86), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/137 (19%), Positives = 63/137 (45%), Gaps = 3/137 (2%)
Query: 46 PYIWQCWAVLENKL---GNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQL 102
P+ + L N L G++ +A + ++ + H + + A ++ QGNI++A +L
Sbjct: 290 PHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRL 349
Query: 103 LAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQE 162
K L+ + LA + + + ++A +++A + +P ++ + +
Sbjct: 350 YRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQ 409
Query: 163 NNLAARQLFERAVQASP 179
+ A Q + RA+Q +P
Sbjct: 410 DVQGALQCYTRAIQINP 426
Score = 33.9 bits (76), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 79/188 (42%), Gaps = 20/188 (10%)
Query: 167 ARQLFERAVQASPKNRFAWHVWG-IFEANMGFIDKGKKLLKIGH---AVNPRDPVLLQSL 222
A+ + +A++ P AW G +F A +G+ L I H AV DP L +
Sbjct: 176 AKACYLKAIETQPNFAVAWSNLGCVFNA------QGEIWLAIHHFEKAVT-LDPNFLDAY 228
Query: 223 ALLEYKYSTANL---ARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSI 279
L A + A + RA + P H V + +++G +D A + Y RA+ +
Sbjct: 229 INLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIEL 288
Query: 280 DSTTESAARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVR 339
A C A + E+ G+++ A + ++L + + A ++ +QGN
Sbjct: 289 QPHFPD-AYCNLANALKEK--GSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGN--- 342
Query: 340 AEEIRNLY 347
EE LY
Sbjct: 343 IEEAVRLY 350
>sp|O15294|OGT1_HUMAN UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110 kDa subunit OS=Homo sapiens GN=OGT PE=1 SV=3
Length = 1046
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/295 (20%), Positives = 116/295 (39%), Gaps = 6/295 (2%)
Query: 44 ENPYIWQCWAVLEN---KLGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKAR 100
+NP + + ++ L N + G + +A E + + I + A + G+++ A
Sbjct: 84 QNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAV 143
Query: 101 QLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQ 160
Q L++ + L L R E+A+ + +A + P +W +
Sbjct: 144 QAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNA 203
Query: 161 QENNLAARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQ 220
Q A FE+AV P A+ G D+ +++P V+
Sbjct: 204 QGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHG 263
Query: 221 SLALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSID 280
+LA + Y+ +LA +RRA E+ P + ++G++ A + Y AL +
Sbjct: 264 NLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLC 323
Query: 281 STTESAARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQG 335
T A L +++ GN+ A RL+R +L + + A + + QG
Sbjct: 324 PTH---ADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQG 375
Score = 37.7 bits (86), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/137 (19%), Positives = 63/137 (45%), Gaps = 3/137 (2%)
Query: 46 PYIWQCWAVLENKL---GNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQL 102
P+ + L N L G++ +A + ++ + H + + A ++ QGNI++A +L
Sbjct: 290 PHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRL 349
Query: 103 LAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQE 162
K L+ + LA + + + ++A +++A + +P ++ + +
Sbjct: 350 YRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQ 409
Query: 163 NNLAARQLFERAVQASP 179
+ A Q + RA+Q +P
Sbjct: 410 DVQGALQCYTRAIQINP 426
Score = 33.9 bits (76), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 79/188 (42%), Gaps = 20/188 (10%)
Query: 167 ARQLFERAVQASPKNRFAWHVWG-IFEANMGFIDKGKKLLKIGH---AVNPRDPVLLQSL 222
A+ + +A++ P AW G +F A +G+ L I H AV DP L +
Sbjct: 176 AKACYLKAIETQPNFAVAWSNLGCVFNA------QGEIWLAIHHFEKAVT-LDPNFLDAY 228
Query: 223 ALLEYKYSTANL---ARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSI 279
L A + A + RA + P H V + +++G +D A + Y RA+ +
Sbjct: 229 INLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIEL 288
Query: 280 DSTTESAARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVR 339
A C A + E+ G+++ A + ++L + + A ++ +QGN
Sbjct: 289 QPHFPD-AYCNLANALKEK--GSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGN--- 342
Query: 340 AEEIRNLY 347
EE LY
Sbjct: 343 IEEAVRLY 350
>sp|P56558|OGT1_RAT UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110 kDa subunit OS=Rattus norvegicus GN=Ogt PE=1 SV=1
Length = 1036
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/295 (20%), Positives = 116/295 (39%), Gaps = 6/295 (2%)
Query: 44 ENPYIWQCWAVLEN---KLGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKAR 100
+NP + + ++ L N + G + +A E + + I + A + G+++ A
Sbjct: 74 QNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAV 133
Query: 101 QLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQ 160
Q L++ + L L R E+A+ + +A + P +W +
Sbjct: 134 QAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNA 193
Query: 161 QENNLAARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQ 220
Q A FE+AV P A+ G D+ +++P V+
Sbjct: 194 QGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHG 253
Query: 221 SLALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSID 280
+LA + Y+ +LA +RRA E+ P + ++G++ A + Y AL +
Sbjct: 254 NLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLC 313
Query: 281 STTESAARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQG 335
T A L +++ GN+ A RL+R +L + + A + + QG
Sbjct: 314 PTH---ADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQG 365
Score = 37.4 bits (85), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/137 (19%), Positives = 63/137 (45%), Gaps = 3/137 (2%)
Query: 46 PYIWQCWAVLENKL---GNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQL 102
P+ + L N L G++ +A + ++ + H + + A ++ QGNI++A +L
Sbjct: 280 PHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRL 339
Query: 103 LAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQE 162
K L+ + LA + + + ++A +++A + +P ++ + +
Sbjct: 340 YRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQ 399
Query: 163 NNLAARQLFERAVQASP 179
+ A Q + RA+Q +P
Sbjct: 400 DVQGALQCYTRAIQINP 416
Score = 33.9 bits (76), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 79/188 (42%), Gaps = 20/188 (10%)
Query: 167 ARQLFERAVQASPKNRFAWHVWG-IFEANMGFIDKGKKLLKIGH---AVNPRDPVLLQSL 222
A+ + +A++ P AW G +F A +G+ L I H AV DP L +
Sbjct: 166 AKACYLKAIETQPNFAVAWSNLGCVFNA------QGEIWLAIHHFEKAVT-LDPNFLDAY 218
Query: 223 ALLEYKYSTANL---ARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSI 279
L A + A + RA + P H V + +++G +D A + Y RA+ +
Sbjct: 219 INLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIEL 278
Query: 280 DSTTESAARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVR 339
A C A + E+ G+++ A + ++L + + A ++ +QGN
Sbjct: 279 QPHFPD-AYCNLANALKEK--GSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGN--- 332
Query: 340 AEEIRNLY 347
EE LY
Sbjct: 333 IEEAVRLY 340
>sp|Q8CGY8|OGT1_MOUSE UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110 kDa subunit OS=Mus musculus GN=Ogt PE=1 SV=2
Length = 1046
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/295 (20%), Positives = 116/295 (39%), Gaps = 6/295 (2%)
Query: 44 ENPYIWQCWAVLEN---KLGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKAR 100
+NP + + ++ L N + G + +A E + + I + A + G+++ A
Sbjct: 84 QNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAV 143
Query: 101 QLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQ 160
Q L++ + L L R E+A+ + +A + P +W +
Sbjct: 144 QAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNA 203
Query: 161 QENNLAARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQ 220
Q A FE+AV P A+ G D+ +++P V+
Sbjct: 204 QGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHG 263
Query: 221 SLALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSID 280
+LA + Y+ +LA +RRA E+ P + ++G++ A + Y AL +
Sbjct: 264 NLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLC 323
Query: 281 STTESAARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQG 335
T A L +++ GN+ A RL+R +L + + A + + QG
Sbjct: 324 PTH---ADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQG 375
Score = 37.4 bits (85), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/137 (19%), Positives = 63/137 (45%), Gaps = 3/137 (2%)
Query: 46 PYIWQCWAVLENKL---GNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQL 102
P+ + L N L G++ +A + ++ + H + + A ++ QGNI++A +L
Sbjct: 290 PHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRL 349
Query: 103 LAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQE 162
K L+ + LA + + + ++A +++A + +P ++ + +
Sbjct: 350 YRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQ 409
Query: 163 NNLAARQLFERAVQASP 179
+ A Q + RA+Q +P
Sbjct: 410 DVQGALQCYTRAIQINP 426
Score = 33.9 bits (76), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 79/188 (42%), Gaps = 20/188 (10%)
Query: 167 ARQLFERAVQASPKNRFAWHVWG-IFEANMGFIDKGKKLLKIGH---AVNPRDPVLLQSL 222
A+ + +A++ P AW G +F A +G+ L I H AV DP L +
Sbjct: 176 AKACYLKAIETQPNFAVAWSNLGCVFNA------QGEIWLAIHHFEKAVT-LDPNFLDAY 228
Query: 223 ALLEYKYSTANL---ARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSI 279
L A + A + RA + P H V + +++G +D A + Y RA+ +
Sbjct: 229 INLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIEL 288
Query: 280 DSTTESAARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVR 339
A C A + E+ G+++ A + ++L + + A ++ +QGN
Sbjct: 289 QPHFPD-AYCNLANALKEK--GSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGN--- 342
Query: 340 AEEIRNLY 347
EE LY
Sbjct: 343 IEEAVRLY 350
>sp|Q27HV0|OGT1_PIG UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
110 kDa subunit OS=Sus scrofa GN=OGT PE=2 SV=1
Length = 1046
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/295 (20%), Positives = 116/295 (39%), Gaps = 6/295 (2%)
Query: 44 ENPYIWQCWAVLEN---KLGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKAR 100
+NP + + ++ L N + G + +A E + + I + A + G+++ A
Sbjct: 84 QNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAV 143
Query: 101 QLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQ 160
Q L++ + L L R E+A+ + +A + P +W +
Sbjct: 144 QAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNA 203
Query: 161 QENNLAARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQ 220
Q A FE+AV P A+ G D+ +++P V+
Sbjct: 204 QGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHG 263
Query: 221 SLALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSID 280
+LA + Y+ +LA +RRA E+ P + ++G++ A + Y AL +
Sbjct: 264 NLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLC 323
Query: 281 STTESAARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQG 335
T A L +++ GN+ A RL+R +L + + A + + QG
Sbjct: 324 PTH---ADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQG 375
Score = 37.4 bits (85), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/137 (19%), Positives = 63/137 (45%), Gaps = 3/137 (2%)
Query: 46 PYIWQCWAVLENKL---GNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQL 102
P+ + L N L G++ +A + ++ + H + + A ++ QGNI++A +L
Sbjct: 290 PHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRL 349
Query: 103 LAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQE 162
K L+ + LA + + + ++A +++A + +P ++ + +
Sbjct: 350 YRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQ 409
Query: 163 NNLAARQLFERAVQASP 179
+ A Q + RA+Q +P
Sbjct: 410 DVQGALQCYTRAIQINP 426
Score = 33.9 bits (76), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 79/188 (42%), Gaps = 20/188 (10%)
Query: 167 ARQLFERAVQASPKNRFAWHVWG-IFEANMGFIDKGKKLLKIGH---AVNPRDPVLLQSL 222
A+ + +A++ P AW G +F A +G+ L I H AV DP L +
Sbjct: 176 AKACYLKAIETQPNFAVAWSNLGCVFNA------QGEIWLAIHHFEKAVT-LDPNFLDAY 228
Query: 223 ALLEYKYSTANL---ARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSI 279
L A + A + RA + P H V + +++G +D A + Y RA+ +
Sbjct: 229 INLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIEL 288
Query: 280 DSTTESAARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVR 339
A C A + E+ G+++ A + ++L + + A ++ +QGN
Sbjct: 289 QPHFPD-AYCNLANALKEK--GSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGN--- 342
Query: 340 AEEIRNLY 347
EE LY
Sbjct: 343 IEEAVRLY 350
>sp|Q6BSP7|CLF1_DEBHA Pre-mRNA-splicing factor CLF1 OS=Debaryomyces hansenii (strain ATCC
36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=CLF1 PE=3 SV=2
Length = 714
Score = 52.4 bits (124), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 116/283 (40%), Gaps = 39/283 (13%)
Query: 124 EAKANR-YEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNR 182
E K N + +AR++F +A + N + W + Q E+ +N AR L +RAV P+
Sbjct: 78 EVKHNHDFPRARSIFERALEVNVQHIPFWTHYIQFELSHKNITHARNLLDRAVTTLPRVD 137
Query: 183 FAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRA 242
W ++ E + + + + + NP +P + E +Y + AR+++ R
Sbjct: 138 KLWFLYVQTEETLKNYQMVRIIFERWLSWNP-NPSAWDAYINYEKRYDEYDNAREIYIRY 196
Query: 243 SEIDPRHQPVWIAWGWMEWKEGNLDT-----ARELYERALSIDSTTESA--------ARC 289
+I + +W+ W E + +D R ++E LS+DS S A
Sbjct: 197 VQIHSSGE-IWLKWIDFEMNDVPIDPEQVKRIRNVFE--LSVDSMLASEALRGDISLAEI 253
Query: 290 LQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEIRNLYFQ 349
+ W + E V AR +F+ L+ D + E RN +
Sbjct: 254 INKWSLWEISVKEYERARAIFQ----------------LMLKSDTIQEIITPEQRNQIYS 297
Query: 350 QRTEVVDDASWVMGFMDIIDPALDRIKQLLNLEKSSYKEPSAY 392
TE + S+ G D I+ ++ IK+ L E+ K PS Y
Sbjct: 298 SYTEF--EKSY--GDKDTIESSI-MIKRKLKYEEEVNKSPSDY 335
Score = 48.9 bits (115), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 60/148 (40%), Gaps = 4/148 (2%)
Query: 52 WAVLENKLGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCG 111
W V N + +AR +F+ + + HI W + EL NI AR LL + +
Sbjct: 77 WEVKHN--HDFPRARSIFERALEVNVQHIPFWTHYIQFELSHKNITHARNLLDRAVTTLP 134
Query: 112 GNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLF 171
+ ++ E Y+ R +F + NP A W A+ E + + AR+++
Sbjct: 135 RVDKLWFLYVQTEETLKNYQMVRIIFERWLSWNPNPSA-WDAYINYEKRYDEYDNAREIY 193
Query: 172 ERAVQASPKNRFAWHVWGIFEANMGFID 199
R VQ W W FE N ID
Sbjct: 194 IRYVQIHSSGEI-WLKWIDFEMNDVPID 220
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/192 (20%), Positives = 80/192 (41%), Gaps = 38/192 (19%)
Query: 137 FRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVWGIF----- 191
+ + +P SW ++ + Q++NN R+ FERA++ P + F VW +
Sbjct: 324 YEEEVNKSPSDYDSWWSYISILQQEDNNEVTRETFERAIKVIPTDAFKSTVWRRYIYIWV 383
Query: 192 ------EANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEI 245
E MG I+ G+ + V P +++ A K++ ++
Sbjct: 384 KYAFWEEFTMGSIENGRNIWNKALKVIPHK------------RFTFA----KIWISFAQF 427
Query: 246 DPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQRVGNLSA 305
+ R+ P E L +AR++ R++ ST + + + + LEQ++G
Sbjct: 428 EIRNDP-----------ENGLASARKILGRSIGQSSTVKPKRKLFKFYIELEQKLGEWDR 476
Query: 306 ARRLFRSSLNIN 317
R+L+ L ++
Sbjct: 477 VRKLYEKWLELS 488
>sp|O74835|RRP5_SCHPO rRNA biogenesis protein rrp5 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=rrp5 PE=1 SV=1
Length = 1690
Score = 52.0 bits (123), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/240 (20%), Positives = 95/240 (39%), Gaps = 33/240 (13%)
Query: 82 AWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQAT 141
W LE+ G +++ + +C +Y+ L + K + + A +
Sbjct: 1481 VWMALLNLEVAYGTEDSLKEVFKEACAYCDA-LIVYEKLCGILIKGGKVDLADEYMQLML 1539
Query: 142 KCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKG 201
K + + WI ++ + + A L ER++Q+ PK+ HV G I+K
Sbjct: 1540 KNFKQVPSVWIQYATFLLNNDKAEKAHGLLERSLQSLPKSE---HV--------GIIEK- 1587
Query: 202 KKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEW 261
A+LE+K R +F P+ +W ME
Sbjct: 1588 --------------------FAILEFKNGDPERGRTIFEGLLSSYPKRLDLWNVLIDMEM 1627
Query: 262 KEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSY 321
K+ + R L++R L+++ +T+ A + W E+ +G+ A ++ R ++ S+S+
Sbjct: 1628 KQDDPSIVRRLFQRLLALNLSTKKAKFAFKKWLAYEKNIGDDEGAEQVKRRAIEYVSESH 1687
>sp|Q12309|CLF1_YEAST Pre-mRNA-splicing factor CLF1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=CLF1 PE=1 SV=1
Length = 687
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 68/148 (45%), Gaps = 2/148 (1%)
Query: 49 WQCWAVLENKLGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLK 108
W +A E + ++ +AR +F+ + + D I W + EL+ I AR L+ + +
Sbjct: 68 WIRYAQFEIEQHDMRRARSIFERALLVDSSFIPLWIRYIDAELKVKCINHARNLMNRAIS 127
Query: 109 FCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAAR 168
+ ++ ++E N E R+L+ + P +W ++ E++Q+N R
Sbjct: 128 TLPRVDKLWYKYLIVEESLNNVEIVRSLYTKWCSLEP-GVNAWNSFVDFEIRQKNWNGVR 186
Query: 169 QLFERAVQASPKNRFAWHVWGIFEANMG 196
+++ + V A P+ + W W FE G
Sbjct: 187 EIYSKYVMAHPQMQ-TWLKWVRFENRHG 213
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 69/166 (41%), Gaps = 9/166 (5%)
Query: 171 FERAVQ-ASPKNRFA----WHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALL 225
F+R + P F W ++ F + K +K+L + P+ + L
Sbjct: 388 FQRLIDDIIPHKHFTFSKIWLMYAKFLIRHDDVPKARKILGKAIGLCPKAKTF-KGYIEL 446
Query: 226 EYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDS---T 282
E K + RK++ + E P +W +G +E G+ D R +Y AL +S T
Sbjct: 447 EVKLKEFDRVRKIYEKFIEFQPSDLQIWSQYGELEENLGDWDRVRGIYTIALDENSDFLT 506
Query: 283 TESAARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYITWMTWA 328
E+ LQ + E AR+L+R L +N S +W+ +A
Sbjct: 507 KEAKIVLLQKYITFETESQEFEKARKLYRRYLELNQYSPQSWIEFA 552
Score = 45.8 bits (107), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 72/196 (36%), Gaps = 39/196 (19%)
Query: 142 KCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKG 201
K N WI ++Q E++Q + AR +FERA+ W + +ID
Sbjct: 59 KRNRLDMGQWIRYAQFEIEQHDMRRARSIFERALLVDSSFIPLW---------IRYIDAE 109
Query: 202 KKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEW 261
K+ I H AR L RA PR +W + +E
Sbjct: 110 LKVKCINH-------------------------ARNLMNRAISTLPRVDKLWYKYLIVEE 144
Query: 262 KEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSY 321
N++ R LY + S+ E ++ E R N + R ++ + + Q
Sbjct: 145 SLNNVEIVRSLYTKWCSL----EPGVNAWNSFVDFEIRQKNWNGVREIYSKYVMAHPQMQ 200
Query: 322 ITWMTWAQLEEDQGNS 337
TW+ W + E GN+
Sbjct: 201 -TWLKWVRFENRHGNT 215
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 78/177 (44%), Gaps = 6/177 (3%)
Query: 121 ALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPK 180
A E + + +AR++F +A + WI + E++ + AR L RA+ P+
Sbjct: 72 AQFEIEQHDMRRARSIFERALLVDSSFIPLWIRYIDAELKVKCINHARNLMNRAISTLPR 131
Query: 181 NRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFR 240
W+ + I E ++ ++ + L ++ P S E + N R+++
Sbjct: 132 VDKLWYKYLIVEESLNNVEIVRSLYTKWCSLEPGVNA-WNSFVDFEIRQKNWNGVREIYS 190
Query: 241 RASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLE 297
+ P+ Q W+ W E + GN + R +Y +L+ID T + + LQ W +E
Sbjct: 191 KYVMAHPQMQ-TWLKWVRFENRHGNTEFTRSVY--SLAID--TVANLQNLQIWSDME 242
Score = 42.0 bits (97), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 74/203 (36%), Gaps = 45/203 (22%)
Query: 11 GRPYVALGKVLSKQSKVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARELFD 70
+ ++ K L + V +AR I K + + + LE KL + R++++
Sbjct: 404 SKIWLMYAKFLIRHDDVPKARKILGKAIGLCPKAKTF--KGYIELEVKLKEFDRVRKIYE 461
Query: 71 ASTVADKGHIAAWHGWAVLELRQGNIKKAR-----------QLLAKGLKFCGGNEYIYQT 119
+ W + LE G+ + R L K K +YI
Sbjct: 462 KFIEFQPSDLQIWSQYGELEENLGDWDRVRGIYTIALDENSDFLTKEAKIVLLQKYI--- 518
Query: 120 LALLEAKANRYEQARNLFRQATKCNPKSCASWIAWS------------------------ 155
E ++ +E+AR L+R+ + N S SWI ++
Sbjct: 519 --TFETESQEFEKARKLYRRYLELNQYSPQSWIEFAMYQTSTPTEQQLLDLAKLQSENVD 576
Query: 156 ---QMEMQQENNLAARQLFERAV 175
+ E+ EN L AR++FE A+
Sbjct: 577 EDIEFEITDENKLEARKVFEEAI 599
>sp|Q3UV71|TMTC1_MOUSE Transmembrane and TPR repeat-containing protein 1 OS=Mus musculus
GN=Tmtc1 PE=2 SV=2
Length = 942
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 114/301 (37%), Gaps = 6/301 (1%)
Query: 4 IDYWPEDGRPYVALGKVLSKQSKVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIG 63
I Y P+ Y +L +L++Q + EA IY G + + + +AV G
Sbjct: 635 IKYGPDFADAYSSLASLLAEQERFKEAEDIYQAGIKNCPDSSD-LHNNYAVFLVDSGFPE 693
Query: 64 KARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALL 123
KA + + H A L G KA + + LK E + L L
Sbjct: 694 KAVAHYQQAIQLSPSHHVAVVNLGRLYRSLGENSKAEEWYRRALKVARTAE-VLSPLGAL 752
Query: 124 EAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRF 183
R+++A ++R+A P +A +Q+ A ++ V P+
Sbjct: 753 YYNTGRHKEALEVYREAVSLQPSQRELRLALAQVLAVMGQTKEAEKITSHIVSEEPRCLE 812
Query: 184 AWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLE-YKYSTANLARKLFRR- 241
+ + + K + ++ + P+DP ++ L + + NL K F
Sbjct: 813 CYRLLSAIHSKQEHHGKALEAIEKALQLKPKDPKVISELFFTKGNQLREQNLLDKAFESY 872
Query: 242 --ASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQR 299
A +DP W+ G + +G+ +AR YERAL + ++ L LE+R
Sbjct: 873 EAAVTLDPDQAQAWMNMGGIRHIQGSYVSARAYYERALKLVPDSKLLKENLAKLDRLERR 932
Query: 300 V 300
+
Sbjct: 933 L 933
Score = 37.7 bits (86), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 39/215 (18%), Positives = 80/215 (37%), Gaps = 38/215 (17%)
Query: 129 RYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVW 188
+ E+A L +++ K P ++ + + + +QE A +++ ++ P + + +
Sbjct: 623 KTEEAIMLLKESIKYGPDFADAYSSLASLLAEQERFKEAEDIYQAGIKNCPDSSDLHNNY 682
Query: 189 GIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDPR 248
+F + GF +K + H +++A ++ P
Sbjct: 683 AVFLVDSGFPEKA-----VAH-----------------------------YQQAIQLSPS 708
Query: 249 HQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQRVGNLSAARR 308
H + G + G A E Y RAL + T E L G L G A
Sbjct: 709 HHVAVVNLGRLYRSLGENSKAEEWYRRALKVARTAE----VLSPLGALYYNTGRHKEALE 764
Query: 309 LFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEEI 343
++R ++++ + AQ+ G + AE+I
Sbjct: 765 VYREAVSLQPSQRELRLALAQVLAVMGQTKEAEKI 799
>sp|Q99PK0|SYF1_RAT Pre-mRNA-splicing factor SYF1 OS=Rattus norvegicus GN=Xab2 PE=2
SV=1
Length = 855
Score = 48.9 bits (115), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 117/286 (40%), Gaps = 28/286 (9%)
Query: 19 KVLSKQSKVAEARAIYAKGSQATQG---ENPYIWQCWAVLENKLGNIGKARELFDASTVA 75
K+L K + + RA Y GS+ Q ++ +W A LE LG + ++D
Sbjct: 454 KLLRKATALPARRAEYFDGSEPVQNRVYKSLKVWSMLADLEESLGTFQSTKAVYDRILDL 513
Query: 76 DKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEY-----IYQTLALLEAKANRY 130
+A+ +++ + +G+ Y T + +
Sbjct: 514 RIATPQIVINYAMFLEEHKYFEESFKAYERGISLFKWPNVSDIWSTYLTKFISRYGGRKL 573
Query: 131 EQARNLFRQATK-CNPKSCAS-WIAWSQMEMQQENNLAARQLFERAVQA-SPKNRF---- 183
E+AR+LF QA C PK + ++ ++Q+E + A +++RA +A P ++
Sbjct: 574 ERARDLFEQALDGCPPKYAKTLYLLYAQLEEEWGLARHAMAVYDRATRAVEPAQQYDMFN 633
Query: 184 -----AWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKL 238
A ++G+ G K ++L HA R+ L A +E K + AR +
Sbjct: 634 IYIKRAAEIYGVTHTR-GIYQKAIEVLSDEHA---REMCL--RFADMECKLGEIDRARAI 687
Query: 239 FRRASEI-DPRHQ-PVWIAWGWMEWKEGNLDTARELYERALSIDST 282
+ S+I DPR W W E + GN DT RE+ S+ +T
Sbjct: 688 YSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTIREMLRIRRSVQAT 733
>sp|Q9DCD2|SYF1_MOUSE Pre-mRNA-splicing factor SYF1 OS=Mus musculus GN=Xab2 PE=2 SV=1
Length = 855
Score = 48.9 bits (115), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 117/286 (40%), Gaps = 28/286 (9%)
Query: 19 KVLSKQSKVAEARAIYAKGSQATQG---ENPYIWQCWAVLENKLGNIGKARELFDASTVA 75
K+L K + + RA Y GS+ Q ++ +W A LE LG + ++D
Sbjct: 454 KLLRKATALPARRAEYFDGSEPVQNRVYKSLKVWSMLADLEESLGTFQSTKAVYDRILDL 513
Query: 76 DKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEY-----IYQTLALLEAKANRY 130
+A+ +++ + +G+ Y T + +
Sbjct: 514 RIATPQIVINYAMFLEEHKYFEESFKAYERGISLFKWPNVSDIWSTYLTKFISRYGGRKL 573
Query: 131 EQARNLFRQATK-CNPKSCAS-WIAWSQMEMQQENNLAARQLFERAVQA-SPKNRF---- 183
E+AR+LF QA C PK + ++ ++Q+E + A +++RA +A P ++
Sbjct: 574 ERARDLFEQALDGCPPKYAKTLYLLYAQLEEEWGLARHAMAVYDRATRAVEPAQQYDMFN 633
Query: 184 -----AWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKL 238
A ++G+ G K ++L HA R+ L A +E K + AR +
Sbjct: 634 IYIKRAAEIYGVTHTR-GIYQKAIEVLSDEHA---REMCL--RFADMECKLGEIDRARAI 687
Query: 239 FRRASEI-DPRHQ-PVWIAWGWMEWKEGNLDTARELYERALSIDST 282
+ S+I DPR W W E + GN DT RE+ S+ +T
Sbjct: 688 YSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTIREMLRIRRSVQAT 733
>sp|Q8IUR5|TMTC1_HUMAN Transmembrane and TPR repeat-containing protein 1 OS=Homo sapiens
GN=TMTC1 PE=1 SV=3
Length = 882
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 112/301 (37%), Gaps = 6/301 (1%)
Query: 4 IDYWPEDGRPYVALGKVLSKQSKVAEARAIYAKGSQATQGENPYIWQCWAVLENKLGNIG 63
I Y PE Y +L +L++Q + EA IY G + ++ + + V G
Sbjct: 575 IKYGPEFADAYSSLASLLAEQERFKEAEEIYQTGIKNCP-DSSDLHNNYGVFLVDTGLPE 633
Query: 64 KARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALL 123
KA + + H A L G A + + L+ E I L L
Sbjct: 634 KAVAHYQQAIKLSPSHHVAMVNLGRLYRSLGENSMAEEWYKRALQVAHKAE-ILSPLGAL 692
Query: 124 EAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRF 183
RYE+A ++++A P +A +Q+ A ++ V
Sbjct: 693 YYNTGRYEEALQIYQEAAALQPSQRELRLALAQVLAVMGQTKEAEKMTNHIVSEETGCLE 752
Query: 184 AWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLE-YKYSTANLARKLF--- 239
+ + + DK + + P+DP ++ L + + NL K F
Sbjct: 753 CYRLLSAIYSKQENHDKALDAIDKALQLKPKDPKVISELFFTKGNQLREQNLLDKAFESY 812
Query: 240 RRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQR 299
R A +++P W+ G ++ +G +AR YERAL + ++ L LE+R
Sbjct: 813 RVAVQLNPDQAQAWMNMGGIQHIKGKYVSARAYYERALQLVPDSKLLKENLAKLDRLEKR 872
Query: 300 V 300
+
Sbjct: 873 L 873
Score = 37.7 bits (86), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/170 (16%), Positives = 80/170 (47%), Gaps = 2/170 (1%)
Query: 113 NEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFE 172
N ++ LL+++ + E+A L + + K P+ ++ + + + +QE A ++++
Sbjct: 548 NRALFNLGNLLKSQEKK-EEAITLLKDSIKYGPEFADAYSSLASLLAEQERFKEAEEIYQ 606
Query: 173 RAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTA 232
++ P + + +G+F + G +K + ++P V + +L L
Sbjct: 607 TGIKNCPDSSDLHNNYGVFLVDTGLPEKAVAHYQQAIKLSPSHHVAMVNLGRLYRSLGEN 666
Query: 233 NLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDST 282
++A + ++RA ++ + + + G + + G + A ++Y+ A ++ +
Sbjct: 667 SMAEEWYKRALQVAHKAE-ILSPLGALYYNTGRYEEALQIYQEAAALQPS 715
Score = 33.9 bits (76), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 84/197 (42%), Gaps = 18/197 (9%)
Query: 17 LGKVLSKQSKVAEARAIY--AKGSQATQGE-NPYIWQCWAVLENKLGNIGKARELFDAST 73
LG + + EA IY A Q +Q E + Q AV+ G +A ++ +
Sbjct: 689 LGALYYNTGRYEEALQIYQEAAALQPSQRELRLALAQVLAVM----GQTKEAEKMTNHIV 744
Query: 74 VADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEA----KANR 129
+ G + + + + +Q N KA + K L+ + + L + + N
Sbjct: 745 SEETGCLECYRLLSAIYSKQENHDKALDAIDKALQLKPKDPKVISELFFTKGNQLREQNL 804
Query: 130 YEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVWG 189
++A +R A + NP +W+ ++ + ++AR +ERA+Q P ++
Sbjct: 805 LDKAFESYRVAVQLNPDQAQAWMNMGGIQHIKGKYVSARAYYERALQLVPDSK------- 857
Query: 190 IFEANMGFIDKGKKLLK 206
+ + N+ +D+ +K L+
Sbjct: 858 LLKENLAKLDRLEKRLQ 874
>sp|Q20144|TMTC1_CAEEL Transmembrane and TPR repeat-containing protein F38B6.6
OS=Caenorhabditis elegans GN=F38B6.6 PE=3 SV=2
Length = 690
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 91/231 (39%), Gaps = 3/231 (1%)
Query: 92 RQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASW 151
R G K L + GL C N I+ L + + A + A K +P +
Sbjct: 410 RSGEWKTELSLYSSGLSVCPTNAKIHYNLGKVLGDNGLTKDAEKNYWNAIKLDPSYEQAL 469
Query: 152 IAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAV 211
+ + ++ A L RAV P AW GI + N+ + +K LK +
Sbjct: 470 NNLGNLLEKSGDSKTAESLLARAVTLRPSFAVAWMNLGISQMNLKKYYEAEKSLKNSLLI 529
Query: 212 NPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARE 271
P L +L +L + + +A ++ A+ IDP H +W + +L +
Sbjct: 530 RPNSAHCLFNLGVLYQRTNRDEMAMSAWKNATRIDPSHSQ---SWTNLFVVLDHLSQCSQ 586
Query: 272 LYERALSIDSTTESAARCLQAWGVLEQRVGNLSAARRLFRSSLNINSQSYI 322
+ + + S+ + +R G + N +AA +S++++N S +
Sbjct: 587 VIDLSYQALSSVPNESRVHMQIGSCHAKHSNFTAAENHIKSAIDLNPTSVL 637
>sp|Q54J83|APC3_DICDI Anaphase-promoting complex subunit 3 OS=Dictyostelium discoideum
GN=anapc3 PE=3 SV=1
Length = 970
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 108/268 (40%), Gaps = 12/268 (4%)
Query: 29 EARAIYAKGSQATQGENPYIWQCWAVLENKLGNIGKAREL-FDASTVADKGHIAAWHGWA 87
EAR+I+ + SQ PY + + L + + EL + A ++ ++ + W
Sbjct: 690 EARSIFQEVSQM----EPYRLEGMELYSTLLWQMNEDAELSYIAHKYSEFDRLSPY-SWV 744
Query: 88 VLE---LRQGNIKKARQLLAKGLKFCGGNEYIYQTLALLEAKAN-RYEQARNLFRQATKC 143
V+ Q + + A +L + ++ Y Y TL E AN E A N FR A +C
Sbjct: 745 VVGNCFSLQRDHEAAIKLFRRAIQLDPDMTYAY-TLCGHEYLANDELELALNAFRMAIRC 803
Query: 144 NPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVWGI-FEANMGFIDKGK 202
+P+ ++ + +QE A F +A+ + + G+ + N I G
Sbjct: 804 DPRHYNAFYGIGLIYYRQEKYNLAEYHFRKALSINESSSVLCCYLGMTLQHNPNKIQDGI 863
Query: 203 KLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWK 262
+L + P++ LA + + A EI+P+ P++I G +
Sbjct: 864 DMLYRSIEIQPKNTFAKFKLAAFLFANQQYHHAIDQLLEFKEIEPKETPIYILLGKCYKQ 923
Query: 263 EGNLDTARELYERALSIDSTTESAARCL 290
G LD A + AL +D + R L
Sbjct: 924 LGELDKALDSLNTALDLDPKNSNYIRSL 951
Score = 38.9 bits (89), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 59/167 (35%), Gaps = 36/167 (21%)
Query: 150 SWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGH 209
SW+ Q ++ AA +LF RA+Q P +A+ + G H
Sbjct: 742 SWVVVGNCFSLQRDHEAAIKLFRRAIQLDPDMTYAYTLCG-------------------H 782
Query: 210 AVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTA 269
D + LA FR A DPRH + G + +++ + A
Sbjct: 783 EYLANDEL---------------ELALNAFRMAIRCDPRHYNAFYGIGLIYYRQEKYNLA 827
Query: 270 RELYERALSIDSTTESAARCLQAWGVLEQRVGNLSAARRLFRSSLNI 316
+ +ALSI+ + S+ C L+ + + S+ I
Sbjct: 828 EYHFRKALSINES--SSVLCCYLGMTLQHNPNKIQDGIDMLYRSIEI 872
>sp|A7MB10|RRP5_BOVIN Protein RRP5 homolog OS=Bos taurus GN=PDCD11 PE=2 SV=1
Length = 1874
Score = 47.0 bits (110), Expect = 3e-04, Method: Composition-based stats.
Identities = 42/201 (20%), Positives = 83/201 (41%), Gaps = 8/201 (3%)
Query: 86 WAVLELRQGNIKKARQLLAKGLKFCGGNEY-----IYQTLALLEAKANRYEQARNLFRQA 140
+ L+ I+KAR + + LK E ++ L LE E +F +A
Sbjct: 1628 YMAFHLQATEIEKARAVAERALKTISFREEQEKLNVWVALLNLENMYGSQESLTKVFERA 1687
Query: 141 TKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVWGIFEANMGFIDK 200
+ N + ++ + + + E A +L+ R ++ + + W +G F G +
Sbjct: 1688 VQYN-EPLKVFLHLADIYTKSEKFQEAGELYNRMLKRFRQEKAVWVKYGAFLLRRGKAEA 1746
Query: 201 GKKLLKIGHAVNPRDPVL--LQSLALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGW 258
++++ P+ + + A LE++ A AR +F I P+ VW +
Sbjct: 1747 SHRVMQRALECLPKKEHVDVIAKFAQLEFQLGDAERARAIFESTLSIYPKRTDVWSVYID 1806
Query: 259 MEWKEGNLDTARELYERALSI 279
M K G+ AR ++ER + +
Sbjct: 1807 MIIKHGSQKEARAIFERVIHL 1827
Score = 42.0 bits (97), Expect = 0.009, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 51/117 (43%), Gaps = 2/117 (1%)
Query: 64 KARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYI--YQTLA 121
+A EL++ + A W + LR+G + + +++ + L+ E++ A
Sbjct: 1712 EAGELYNRMLKRFRQEKAVWVKYGAFLLRRGKAEASHRVMQRALECLPKKEHVDVIAKFA 1771
Query: 122 LLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQAS 178
LE + E+AR +F PK W + M ++ + AR +FER + S
Sbjct: 1772 QLEFQLGDAERARAIFESTLSIYPKRTDVWSVYIDMIIKHGSQKEARAIFERVIHLS 1828
>sp|Q86TV6|TTC7B_HUMAN Tetratricopeptide repeat protein 7B OS=Homo sapiens GN=TTC7B PE=1
SV=3
Length = 843
Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
Query: 240 RRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQR 299
+ A+ + P V G + G++D AR YE AL+I T + +Q ++ +
Sbjct: 720 QEAANLFPMSHNVLYMRGQIAELRGSMDEARRWYEEALAISPTH---VKSMQRLALILHQ 776
Query: 300 VGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNSVRAEE 342
+G S A ++ R ++ +NS ++ W ++ + QGN A E
Sbjct: 777 LGRYSLAEKILRDAVQVNSTAHEVWNGLGEVLQAQGNDAAATE 819
Score = 38.5 bits (88), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 51/105 (48%)
Query: 179 PKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKL 238
P + ++ G G +D+ ++ + A++P +Q LAL+ ++ +LA K+
Sbjct: 727 PMSHNVLYMRGQIAELRGSMDEARRWYEEALAISPTHVKSMQRLALILHQLGRYSLAEKI 786
Query: 239 FRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTT 283
R A +++ VW G + +GN A E + AL +++++
Sbjct: 787 LRDAVQVNSTAHEVWNGLGEVLQAQGNDAAATECFLTALELEASS 831
Score = 34.3 bits (77), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 79/189 (41%), Gaps = 18/189 (9%)
Query: 8 PEDGRPY---VALGKVLSKQSKVAEARAIYAKGSQATQGE-NPYIW--QCWAVLENKLGN 61
PE G + VA +V S+VA + + S QG +P++ Q W
Sbjct: 653 PETGSVHATSVAASRVEQALSEVASS----LQSSAPKQGPLHPWMTLAQIWLHAAEVYIG 708
Query: 62 IGKARELF----DASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYIY 117
IGK E +A+ + H + + ELR G++ +AR+ + L +
Sbjct: 709 IGKPAEATACTQEAANLFPMSHNVLYMRGQIAELR-GSMDEARRWYEEALAISPTHVKSM 767
Query: 118 QTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQ- 176
Q LAL+ + RY A + R A + N + W ++ Q N+ AA + F A++
Sbjct: 768 QRLALILHQLGRYSLAEKILRDAVQVNSTAHEVWNGLGEVLQAQGNDAAATECFLTALEL 827
Query: 177 --ASPKNRF 183
+SP F
Sbjct: 828 EASSPAVPF 836
>sp|Q4WVF4|SYF1_ASPFU Pre-mRNA-splicing factor syf1 OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=syf1 PE=3
SV=1
Length = 839
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/343 (20%), Positives = 143/343 (41%), Gaps = 46/343 (13%)
Query: 32 AIYAKGSQATQGENPYIWQCWAVLENKLGNIGKARELFDASTVADKGHIA----AWHGWA 87
AI A + G+ +W +A G++ AR +FD + +A W WA
Sbjct: 389 AIAAINPKKAHGKFSELWVNYAKFYESGGDLDTARVIFDKAVKVPFKSVAELADTWCEWA 448
Query: 88 VLELRQGNIKKARQLLAKGLKFCGGN--EYIYQTLA-----------------LLEAKAN 128
+ELR N KA ++AK + + +Y +TL+ L+E+ A
Sbjct: 449 EMELRSENFDKAVDIMAKATQAPKKSTVDYFDETLSPQQRVHKSWKLWSFYVDLVESVAT 508
Query: 129 RYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQ--ASPKNRFAWH 186
E+ R ++ + + + + + ++ + + + + +++ER + + P A+
Sbjct: 509 -LEETRKVYERIFELRIATPQTVVNYANLLEEHKYFEDSFKVYERGLDLFSYP---VAFE 564
Query: 187 VWGIF-----EANMGFIDKGKKLLKIGHAVNPRDPVLLQSLAL----LEYKYSTANLARK 237
+W ++ + +G I++ + L + A++ P + L L LE + A A +
Sbjct: 565 LWNLYLTKAVDRKIG-IERLRDLFE--QALDGCPPKFAKPLYLMYGNLEEERGLARHAMR 621
Query: 238 LFRRASEIDPRHQPVWIAWGWMEWKEGN--LDTARELYERALSIDSTTESAARCLQAWGV 295
++ RA+ + ++ N L + R +YERA++ E+ CL+ +
Sbjct: 622 IYERATRAVSDEDRFEMFEFYITKSASNFGLTSTRPIYERAIAALPDQEAKEMCLK-FAD 680
Query: 296 LEQRVGNLSAARRLF--RSSLNINSQSYITWMTWAQLEEDQGN 336
+E+R+G + AR ++ S + W W E GN
Sbjct: 681 MERRLGEIDRARAIYGHASQFCDPRTNAGFWQKWEAFEVQHGN 723
Score = 35.0 bits (79), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 104/253 (41%), Gaps = 66/253 (26%)
Query: 131 EQARNLFRQATKCNPKSCA----SWIAWSQMEMQQENNLAARQLFERAVQA--------- 177
+ AR +F +A K KS A +W W++ME++ EN A + +A QA
Sbjct: 420 DTARVIFDKAVKVPFKSVAELADTWCEWAEMELRSENFDKAVDIMAKATQAPKKSTVDYF 479
Query: 178 ----SPKNRF--AWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYST 231
SP+ R +W +W ++D L++S+A LE
Sbjct: 480 DETLSPQQRVHKSWKLWSF------YVD------------------LVESVATLEE---- 511
Query: 232 ANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQ 291
RK++ R E+ + + + + + + ++YER L + S + +
Sbjct: 512 ---TRKVYERIFELRIATPQTVVNYANLLEEHKYFEDSFKVYERGLDLFSYPVA----FE 564
Query: 292 AWGV-----LEQRVGNLSAARRLFRSSLNINSQSYIT--WMTWAQLEEDQGNSVRAEEIR 344
W + +++++G + R LF +L+ + ++ + LEE++G + A I
Sbjct: 565 LWNLYLTKAVDRKIG-IERLRDLFEQALDGCPPKFAKPLYLMYGNLEEERGLARHAMRI- 622
Query: 345 NLYFQQRTEVVDD 357
+++ T V D
Sbjct: 623 ---YERATRAVSD 632
>sp|Q5AED6|CLF1_CANAL Pre-mRNA-splicing factor CLF1 OS=Candida albicans (strain SC5314 /
ATCC MYA-2876) GN=CLF1 PE=3 SV=2
Length = 758
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 80/196 (40%), Gaps = 12/196 (6%)
Query: 130 YEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVWG 189
+ +AR++ +A N + WI + Q+E+ +N AR L ERA+ P+ W ++
Sbjct: 137 FPRARSILERALDVNIQHVPFWIQYIQLELSHKNINHARNLMERAINTLPRVNKLWFLYV 196
Query: 190 IFEANMGFIDKGKKLLKIGHAVNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDPRH 249
E + + + + +P D + + E +Y R +F++ P +
Sbjct: 197 QTEEMLKNYPMVRAVFERWLDWHP-DTSVWDAYINFEARYEEKENVRTIFKKYVHEFP-N 254
Query: 250 QPVWIAW--GWMEWKEGNLDTARELYERALSI--------DSTTESAARCLQAWGVLEQR 299
W W ME +++T R ++E A+ + E A + +W E
Sbjct: 255 AGTWYKWIKYEMENNRDDVNTVRAVFESAVDTLLSNKSEENDDDEEFATIISSWTSWEVS 314
Query: 300 VGNLSAARRLFRSSLN 315
G S A +F+ L+
Sbjct: 315 CGEASRANEIFKLLLD 330
Score = 42.0 bits (97), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 56/141 (39%), Gaps = 4/141 (2%)
Query: 52 WAVLENKLGNIGKARELFDASTVADKGHIAAWHGWAVLELRQGNIKKARQLLAKGLKFCG 111
W + N + +AR + + + + H+ W + LEL NI AR L+ + +
Sbjct: 129 WEIENN--HDFPRARSILERALDVNIQHVPFWIQYIQLELSHKNINHARNLMERAINTLP 186
Query: 112 GNEYIYQTLALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLF 171
++ E Y R +F + +P + W A+ E + E R +F
Sbjct: 187 RVNKLWFLYVQTEEMLKNYPMVRAVFERWLDWHPDTSV-WDAYINFEARYEEKENVRTIF 245
Query: 172 ERAVQASPKNRFAWHVWGIFE 192
++ V P N W+ W +E
Sbjct: 246 KKYVHEFP-NAGTWYKWIKYE 265
>sp|Q05022|RRP5_YEAST rRNA biogenesis protein RRP5 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RRP5 PE=1 SV=1
Length = 1729
Score = 43.9 bits (102), Expect = 0.003, Method: Composition-based stats.
Identities = 35/139 (25%), Positives = 57/139 (41%), Gaps = 6/139 (4%)
Query: 64 KARELFDASTVADKGH-IAAWHGWAVLELRQGNIKKARQLLAKGLKFCGGNEYI--YQTL 120
KA ELF A+ G ++ W W + ++AR +L LK +I +
Sbjct: 1565 KAAELFKATAKKFGGEKVSIWVSWGDFLISHNEEQEARTILGNALKALPKRNHIEVVRKF 1624
Query: 121 ALLEAKANRYEQARNLFRQATKCNPKSCASWIAWSQMEMQQENNLAARQLFERAVQ---A 177
A LE E+ R+LF PK W + E++ ++ LFER +
Sbjct: 1625 AQLEFAKGDPERGRSLFEGLVADAPKRIDLWNVYVDQEVKAKDKKKVEDLFERIITKKIT 1684
Query: 178 SPKNRFAWHVWGIFEANMG 196
+ +F ++ W FE + G
Sbjct: 1685 RKQAKFFFNKWLQFEESEG 1703
Score = 38.9 bits (89), Expect = 0.081, Method: Composition-based stats.
Identities = 50/263 (19%), Positives = 98/263 (37%), Gaps = 43/263 (16%)
Query: 48 IWQCWAVLENKLGNIGKARELFDAS--TV-----ADKGHIAAWHGWAVLELRQGNIKKAR 100
+W + + +L I KAREL + + T+ A+K +I W LE G +
Sbjct: 1477 VWMNYMAFQLQLSEIEKARELAERALKTINFREEAEKLNI--WIAMLNLENTFGTEETLE 1534
Query: 101 QLLAKGLKFCGGNEYIYQTLALLEAKANRYEQARNLFR-QATKCNPKSCASWIAWSQMEM 159
++ ++ ++ + L + E + ++++A LF+ A K + + W++W +
Sbjct: 1535 EVFSRACQYMDSYTIHTKLLGIYEI-SEKFDKAAELFKATAKKFGGEKVSIWVSWGDFLI 1593
Query: 160 QQENNLAARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHAVNPRDPVLL 219
AR + A++A PK H+ ++
Sbjct: 1594 SHNEEQEARTILGNALKALPKRN---HI-----------------------------EVV 1621
Query: 220 QSLALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSI 279
+ A LE+ R LF P+ +W + E K + +L+ER ++
Sbjct: 1622 RKFAQLEFAKGDPERGRSLFEGLVADAPKRIDLWNVYVDQEVKAKDKKKVEDLFERIITK 1681
Query: 280 DSTTESAARCLQAWGVLEQRVGN 302
T + A W E+ G+
Sbjct: 1682 KITRKQAKFFFNKWLQFEESEGD 1704
>sp|Q9ULT0|TTC7A_HUMAN Tetratricopeptide repeat protein 7A OS=Homo sapiens GN=TTC7A PE=1
SV=3
Length = 858
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/99 (23%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 239 FRRASEIDPRHQPVWIAWGWMEWKEGNLDTARELYERALSIDSTTESAARCLQAWGVLEQ 298
+ A+ + P V G + +GNL+ A++LY+ AL+++ R + + G++
Sbjct: 734 IQEAAGLFPTSHSVLYMRGRLAEVKGNLEEAKQLYKEALTVNP---DGVRIMHSLGLMLS 790
Query: 299 RVGNLSAARRLFRSSLNINSQSYITWMTWAQLEEDQGNS 337
R+G+ S A+++ R ++ S + W ++ + QG +
Sbjct: 791 RLGHKSLAQKVLRDAVERQSTCHEAWQGLGEVLQAQGQN 829
Score = 42.0 bits (97), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 61/133 (45%)
Query: 151 WIAWSQMEMQQENNLAARQLFERAVQASPKNRFAWHVWGIFEANMGFIDKGKKLLKIGHA 210
W+ +++ M+Q++ A + A P + ++ G G +++ K+L K
Sbjct: 714 WLQAAELFMEQQHLKEAGFCIQEAAGLFPTSHSVLYMRGRLAEVKGNLEEAKQLYKEALT 773
Query: 211 VNPRDPVLLQSLALLEYKYSTANLARKLFRRASEIDPRHQPVWIAWGWMEWKEGNLDTAR 270
VNP ++ SL L+ + +LA+K+ R A E W G + +G + A
Sbjct: 774 VNPDGVRIMHSLGLMLSRLGHKSLAQKVLRDAVERQSTCHEAWQGLGEVLQAQGQNEAAV 833
Query: 271 ELYERALSIDSTT 283
+ + AL +++++
Sbjct: 834 DCFLTALELEASS 846
>sp|Q9P7R9|SYF1_SCHPO Pre-mRNA-splicing factor cwf3 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=cwf3 PE=1 SV=1
Length = 790
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 130/327 (39%), Gaps = 42/327 (12%)
Query: 16 ALGKVLSKQSKVAE-------ARAIYAKGSQA---TQGENPYIWQCWAVLENKLGNIGKA 65
+LGK+ S+ ++ E +R I+ K + T E +W WA +E + N A
Sbjct: 388 SLGKLFSEFARFYENFDDLEQSRIIFEKATHVPYKTVNELAQVWIDWAEMELRHQNFDAA 447
Query: 66 RELF-DASTVADKGHIA-----------------AWHGWAVLELRQGNIKKARQLLAKGL 107
R+L DA K HI+ W + LE G I+ R+L +
Sbjct: 448 RKLIGDAVHAPRKSHISFFDESLSPQVRLHKSSKIWMYYLDLEESVGTIETTRKLYDRVF 507
Query: 108 KFCGGNEYIYQTLALLEAKANRYEQARNLFRQ--ATKCNPKSCASW---IAWSQMEMQQE 162
+ + A L + +E + ++ + A P + W + Q
Sbjct: 508 ELKIATPQVVVNYANLLEENAYFEDSFKIYERGVALFSYPVAFELWNLYLTKFVKRYQGT 567
Query: 163 NNLAARQLFERAVQASPK--NRFAWHVWGIFEANMGFIDKGKKLL-KIGHAVNPRDPVLL 219
+ R LFE+A++ P ++ + ++ FE G + +L K V D + +
Sbjct: 568 HMERTRDLFEQALEGCPPEFSKSIYLLYADFEEKFGKAKRSISILEKAADKVKTADRLAI 627
Query: 220 QSLALLEYKYSTANLA-RKLFRRASE--IDPRHQPVWIAWGWMEWKEGNLDTARELY-ER 275
++ L++ + LA R ++ +A E D + + + + ME K G +D AR +Y
Sbjct: 628 YNVLLVKVALNYGVLATRTVYEKAIESLSDSEVKDMCLRFAEMETKLGEIDRARLIYIHG 687
Query: 276 ALSIDSTTESAARCLQAWGVLEQRVGN 302
+ D E+ +AW E R GN
Sbjct: 688 SQYCDPRVETD--YWKAWQEFEIRYGN 712
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.131 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 174,655,343
Number of Sequences: 539616
Number of extensions: 7011051
Number of successful extensions: 19931
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 98
Number of HSP's successfully gapped in prelim test: 85
Number of HSP's that attempted gapping in prelim test: 18606
Number of HSP's gapped (non-prelim): 790
length of query: 476
length of database: 191,569,459
effective HSP length: 121
effective length of query: 355
effective length of database: 126,275,923
effective search space: 44827952665
effective search space used: 44827952665
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)