Query 011848
Match_columns 476
No_of_seqs 127 out of 1284
Neff 9.9
Searched_HMMs 29240
Date Mon Mar 25 16:33:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011848.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011848hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 5.8E-69 2E-73 534.2 38.4 437 1-467 8-453 (454)
2 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 9.9E-66 3.4E-70 521.4 40.4 457 4-467 6-478 (482)
3 2vch_A Hydroquinone glucosyltr 100.0 2.5E-61 8.4E-66 487.5 44.4 445 1-468 1-469 (480)
4 2c1x_A UDP-glucose flavonoid 3 100.0 5E-62 1.7E-66 489.4 38.6 442 1-468 1-452 (456)
5 2acv_A Triterpene UDP-glucosyl 100.0 1.4E-58 4.6E-63 465.8 36.6 433 5-467 8-462 (463)
6 2iya_A OLEI, oleandomycin glyc 100.0 1.7E-45 5.9E-50 368.6 33.4 394 3-467 9-420 (424)
7 4amg_A Snogd; transferase, pol 100.0 9.3E-45 3.2E-49 360.4 25.2 357 5-466 21-398 (400)
8 1iir_A Glycosyltransferase GTF 100.0 8.6E-43 2.9E-47 347.8 27.7 386 7-470 1-402 (415)
9 1rrv_A Glycosyltransferase GTF 100.0 1.1E-41 3.6E-46 340.1 26.4 385 7-470 1-403 (416)
10 3rsc_A CALG2; TDP, enediyne, s 100.0 2.5E-40 8.4E-45 330.2 31.9 385 4-467 18-412 (415)
11 3h4t_A Glycosyltransferase GTF 100.0 5.3E-41 1.8E-45 333.4 25.6 376 7-470 1-384 (404)
12 3ia7_A CALG4; glycosysltransfe 100.0 1.2E-39 4.1E-44 323.7 33.4 385 4-467 2-397 (402)
13 2yjn_A ERYCIII, glycosyltransf 100.0 9.7E-40 3.3E-44 328.3 25.5 375 4-468 18-435 (441)
14 2iyf_A OLED, oleandomycin glyc 100.0 1.7E-38 5.9E-43 318.4 31.1 387 1-466 1-397 (430)
15 2p6p_A Glycosyl transferase; X 100.0 4.1E-38 1.4E-42 310.9 30.1 355 7-469 1-380 (384)
16 4fzr_A SSFS6; structural genom 100.0 3.5E-37 1.2E-41 305.6 20.5 347 4-448 13-385 (398)
17 3oti_A CALG3; calicheamicin, T 100.0 3.6E-36 1.2E-40 298.3 26.4 353 5-467 19-396 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 100.0 5E-34 1.7E-38 282.3 26.5 356 6-467 1-387 (391)
19 3otg_A CALG1; calicheamicin, T 100.0 4.7E-32 1.6E-36 270.0 30.7 368 5-467 19-407 (412)
20 3s2u_A UDP-N-acetylglucosamine 100.0 1.7E-29 5.8E-34 246.6 25.9 319 8-447 4-337 (365)
21 2o6l_A UDP-glucuronosyltransfe 99.9 4E-27 1.4E-31 204.5 14.9 163 268-447 6-170 (170)
22 1f0k_A MURG, UDP-N-acetylgluco 99.9 3.8E-20 1.3E-24 180.7 24.5 332 7-468 7-355 (364)
23 3hbm_A UDP-sugar hydrolase; PS 99.6 2.3E-14 7.8E-19 132.8 20.2 115 282-411 156-273 (282)
24 2jzc_A UDP-N-acetylglucosamine 99.6 6.9E-16 2.4E-20 137.1 8.3 132 280-426 25-196 (224)
25 1v4v_A UDP-N-acetylglucosamine 99.4 6.2E-12 2.1E-16 122.9 19.7 162 282-470 197-368 (376)
26 3dzc_A UDP-N-acetylglucosamine 99.4 3.4E-12 1.2E-16 125.4 15.9 332 2-440 21-376 (396)
27 3okp_A GDP-mannose-dependent a 99.4 2.7E-10 9.2E-15 111.6 29.0 323 4-438 2-351 (394)
28 3c48_A Predicted glycosyltrans 99.4 2E-10 6.8E-15 114.5 27.5 377 4-469 18-428 (438)
29 3ot5_A UDP-N-acetylglucosamine 99.3 1.1E-11 3.8E-16 122.0 15.0 160 282-467 223-392 (403)
30 3fro_A GLGA glycogen synthase; 99.3 8.7E-10 3E-14 109.6 26.6 161 285-467 252-428 (439)
31 1vgv_A UDP-N-acetylglucosamine 99.3 5.7E-11 2E-15 116.2 14.8 135 282-437 204-348 (384)
32 2iuy_A Avigt4, glycosyltransfe 99.2 2.9E-10 9.9E-15 109.4 18.2 125 286-428 164-307 (342)
33 2gek_A Phosphatidylinositol ma 99.2 1.2E-09 4.2E-14 107.4 21.3 132 285-437 209-355 (406)
34 3beo_A UDP-N-acetylglucosamine 99.2 2.7E-09 9.1E-14 103.9 22.1 135 282-437 204-348 (375)
35 2r60_A Glycosyl transferase, g 99.2 2.2E-08 7.5E-13 101.5 29.1 85 342-436 334-429 (499)
36 2jjm_A Glycosyl transferase, g 99.1 8.6E-07 2.9E-11 86.7 34.6 321 7-437 16-356 (394)
37 2x6q_A Trehalose-synthase TRET 99.1 9.2E-08 3.2E-12 94.4 27.6 85 342-438 292-386 (416)
38 2iw1_A Lipopolysaccharide core 99.1 1.1E-07 3.8E-12 92.2 27.2 142 282-445 194-351 (374)
39 4hwg_A UDP-N-acetylglucosamine 99.0 7.2E-09 2.5E-13 101.0 15.1 315 5-429 8-342 (385)
40 1rzu_A Glycogen synthase 1; gl 98.7 5.3E-06 1.8E-10 83.5 26.1 135 284-437 291-449 (485)
41 3s28_A Sucrose synthase 1; gly 98.6 1.2E-06 4.1E-11 92.6 18.3 78 342-427 639-728 (816)
42 2qzs_A Glycogen synthase; glyc 98.6 2.9E-05 1E-09 78.0 26.8 137 283-437 291-450 (485)
43 2vsy_A XCC0866; transferase, g 98.5 4E-05 1.4E-09 78.7 26.9 89 343-440 434-531 (568)
44 3oy2_A Glycosyltransferase B73 98.4 3.9E-05 1.3E-09 75.3 22.5 88 345-444 256-368 (413)
45 2f9f_A First mannosyl transfer 98.4 1E-06 3.5E-11 75.8 9.6 141 284-443 23-175 (177)
46 2hy7_A Glucuronosyltransferase 98.3 0.00027 9.3E-09 69.2 24.8 75 341-429 263-352 (406)
47 2xci_A KDO-transferase, 3-deox 98.2 0.0006 2E-08 65.9 24.2 95 344-444 261-362 (374)
48 3qhp_A Type 1 capsular polysac 97.8 0.00016 5.6E-09 60.8 11.2 130 284-437 2-146 (166)
49 3tov_A Glycosyl transferase fa 97.7 0.0026 9E-08 60.7 19.0 105 5-137 7-115 (349)
50 1psw_A ADP-heptose LPS heptosy 97.6 0.017 5.9E-07 54.8 22.5 102 7-137 1-106 (348)
51 3rhz_A GTF3, nucleotide sugar 97.5 0.00013 4.5E-09 69.3 7.3 111 344-466 215-337 (339)
52 2bfw_A GLGA glycogen synthase; 97.3 0.0034 1.2E-07 54.3 13.4 83 344-437 96-187 (200)
53 4gyw_A UDP-N-acetylglucosamine 97.2 0.0068 2.3E-07 63.7 16.0 136 281-429 520-668 (723)
54 3q3e_A HMW1C-like glycosyltran 97.1 0.0035 1.2E-07 63.5 12.1 144 284-439 441-596 (631)
55 2x0d_A WSAF; GT4 family, trans 95.6 0.042 1.4E-06 53.6 9.5 85 342-437 294-385 (413)
56 3vue_A GBSS-I, granule-bound s 94.7 0.091 3.1E-06 53.1 9.0 134 283-428 326-476 (536)
57 2phj_A 5'-nucleotidase SURE; S 91.6 0.79 2.7E-05 40.7 8.8 115 6-141 1-128 (251)
58 3vue_A GBSS-I, granule-bound s 90.1 0.16 5.6E-06 51.2 3.5 37 5-43 8-52 (536)
59 2wqk_A 5'-nucleotidase SURE; S 89.2 1.7 5.7E-05 38.8 8.9 115 6-141 1-128 (251)
60 3qxc_A Dethiobiotin synthetase 88.0 4.6 0.00016 35.7 11.0 123 5-143 19-172 (242)
61 1kjn_A MTH0777; hypotethical p 87.0 1.1 3.7E-05 35.8 5.4 50 1-50 1-52 (157)
62 2x0d_A WSAF; GT4 family, trans 86.7 0.32 1.1E-05 47.3 2.9 40 5-44 45-89 (413)
63 3fgn_A Dethiobiotin synthetase 84.2 19 0.00064 31.9 13.0 120 5-142 24-167 (251)
64 3q9l_A Septum site-determining 82.7 7.6 0.00026 34.3 10.1 39 6-44 1-41 (260)
65 4dim_A Phosphoribosylglycinami 81.8 6.4 0.00022 37.6 9.8 36 4-44 5-40 (403)
66 3zqu_A Probable aromatic acid 81.7 2.2 7.4E-05 36.8 5.6 46 6-52 4-49 (209)
67 4dzz_A Plasmid partitioning pr 81.6 6.5 0.00022 33.3 8.8 37 8-44 3-40 (206)
68 1j9j_A Stationary phase surviV 81.3 4.5 0.00016 35.8 7.6 116 7-141 1-129 (247)
69 1ccw_A Protein (glutamate muta 81.3 2.1 7.2E-05 34.1 5.1 46 6-51 3-48 (137)
70 3igf_A ALL4481 protein; two-do 80.8 7.5 0.00026 36.9 9.6 37 6-42 1-38 (374)
71 2iz6_A Molybdenum cofactor car 80.1 7.5 0.00026 32.4 8.2 101 270-390 34-140 (176)
72 3t5t_A Putative glycosyltransf 79.9 5.6 0.00019 39.3 8.5 112 344-469 353-473 (496)
73 1g5t_A COB(I)alamin adenosyltr 79.5 16 0.00053 31.0 10.1 97 6-121 28-130 (196)
74 2e6c_A 5'-nucleotidase SURE; S 79.4 11 0.00037 33.3 9.4 114 7-141 1-130 (244)
75 3iqw_A Tail-anchored protein t 79.0 5.8 0.0002 37.0 8.1 40 5-44 14-54 (334)
76 2a5l_A Trp repressor binding p 77.0 2.9 0.0001 35.5 5.0 42 3-44 2-44 (200)
77 3ty2_A 5'-nucleotidase SURE; s 76.8 2.7 9.3E-05 37.4 4.7 45 1-47 6-50 (261)
78 2ejb_A Probable aromatic acid 76.6 4.1 0.00014 34.4 5.7 45 7-52 2-46 (189)
79 3nb0_A Glycogen [starch] synth 76.3 10 0.00035 38.9 9.3 77 349-427 499-592 (725)
80 1sbz_A Probable aromatic acid 74.8 3.7 0.00013 35.0 4.9 46 7-53 1-47 (197)
81 3llv_A Exopolyphosphatase-rela 73.7 1.9 6.6E-05 34.3 2.8 38 1-43 1-38 (141)
82 3vot_A L-amino acid ligase, BL 73.7 19 0.00066 34.5 10.5 98 1-135 1-101 (425)
83 2gt1_A Lipopolysaccharide hept 73.0 2.6 8.8E-05 39.1 3.9 134 282-429 177-322 (326)
84 3mc3_A DSRE/DSRF-like family p 71.5 7.5 0.00026 30.7 5.8 40 6-45 15-57 (134)
85 3ghy_A Ketopantoate reductase 71.2 2.4 8.1E-05 39.7 3.2 42 4-50 1-42 (335)
86 3bfv_A CAPA1, CAPB2, membrane 70.9 19 0.00064 32.3 9.1 39 6-44 81-121 (271)
87 1uqt_A Alpha, alpha-trehalose- 70.6 17 0.00058 35.8 9.3 109 345-469 333-454 (482)
88 3gpi_A NAD-dependent epimerase 70.2 4.7 0.00016 36.4 4.9 35 4-43 1-35 (286)
89 3lqk_A Dipicolinate synthase s 70.1 4.5 0.00015 34.6 4.4 40 5-45 6-46 (201)
90 2yxb_A Coenzyme B12-dependent 70.0 4.4 0.00015 33.3 4.2 46 5-50 17-62 (161)
91 3kkl_A Probable chaperone prot 70.0 6.5 0.00022 34.8 5.6 41 4-44 1-52 (244)
92 2vqe_B 30S ribosomal protein S 69.6 7.9 0.00027 34.3 5.9 33 110-142 157-191 (256)
93 3n7t_A Macrophage binding prot 69.3 9.2 0.00031 33.9 6.4 39 6-44 9-58 (247)
94 2xj4_A MIPZ; replication, cell 68.5 5.2 0.00018 36.3 4.8 41 4-44 1-43 (286)
95 2ywr_A Phosphoribosylglycinami 68.3 20 0.00069 30.9 8.3 34 6-42 1-36 (216)
96 1uan_A Hypothetical protein TT 68.0 13 0.00044 32.4 7.1 35 6-41 1-36 (227)
97 1jx7_A Hypothetical protein YC 67.7 7 0.00024 29.7 4.8 40 6-45 1-45 (117)
98 3cio_A ETK, tyrosine-protein k 67.5 22 0.00075 32.4 8.9 38 7-44 104-143 (299)
99 3qjg_A Epidermin biosynthesis 67.4 6 0.00021 32.9 4.5 40 7-47 6-45 (175)
100 1dhr_A Dihydropteridine reduct 67.4 5.3 0.00018 35.0 4.5 39 1-42 1-39 (241)
101 2bw0_A 10-FTHFDH, 10-formyltet 67.3 31 0.0011 31.9 9.9 32 6-42 22-53 (329)
102 1pjq_A CYSG, siroheme synthase 67.3 85 0.0029 30.4 13.5 147 281-448 11-168 (457)
103 2ixd_A LMBE-related protein; h 67.0 13 0.00046 32.7 7.0 33 8-41 6-38 (242)
104 4b4o_A Epimerase family protei 66.5 5.9 0.0002 36.0 4.8 32 7-42 1-32 (298)
105 1y80_A Predicted cobalamin bin 65.4 7.8 0.00027 33.3 5.1 46 6-51 88-133 (210)
106 1e2b_A Enzyme IIB-cellobiose; 65.2 13 0.00043 28.0 5.6 39 4-42 1-39 (106)
107 2hmt_A YUAA protein; RCK, KTN, 64.9 3.3 0.00011 32.6 2.4 37 1-42 1-37 (144)
108 2dpo_A L-gulonate 3-dehydrogen 64.8 3.9 0.00013 37.9 3.2 38 1-43 1-38 (319)
109 2ew2_A 2-dehydropantoate 2-red 64.6 4.4 0.00015 37.1 3.5 33 5-42 2-34 (316)
110 3qsg_A NAD-binding phosphogluc 64.2 3.6 0.00012 38.0 2.8 36 2-42 20-56 (312)
111 3rfo_A Methionyl-tRNA formyltr 63.6 10 0.00036 34.9 5.8 35 3-42 1-35 (317)
112 2i2x_B MTAC, methyltransferase 63.5 9.8 0.00033 33.9 5.5 44 6-49 123-166 (258)
113 1id1_A Putative potassium chan 63.0 5.6 0.00019 32.0 3.5 34 5-43 2-35 (153)
114 2gt1_A Lipopolysaccharide hept 62.5 7 0.00024 36.0 4.5 43 7-49 1-45 (326)
115 3mcu_A Dipicolinate synthase, 62.4 7.6 0.00026 33.3 4.3 40 5-45 4-44 (207)
116 3c24_A Putative oxidoreductase 62.2 6.2 0.00021 35.8 4.0 32 6-42 11-43 (286)
117 4dll_A 2-hydroxy-3-oxopropiona 62.0 8.3 0.00028 35.6 4.9 33 5-42 30-62 (320)
118 1mvl_A PPC decarboxylase athal 61.0 10 0.00035 32.5 4.9 43 5-49 18-60 (209)
119 2r8r_A Sensor protein; KDPD, P 60.9 12 0.00041 32.6 5.3 39 6-44 6-44 (228)
120 2qyt_A 2-dehydropantoate 2-red 60.9 3.1 0.00011 38.3 1.7 41 6-51 8-54 (317)
121 3eag_A UDP-N-acetylmuramate:L- 60.6 8.4 0.00029 35.7 4.6 35 4-42 2-36 (326)
122 3czc_A RMPB; alpha/beta sandwi 59.9 9.2 0.00031 29.0 4.0 41 2-42 14-56 (110)
123 4e3z_A Putative oxidoreductase 59.9 9.4 0.00032 34.1 4.8 38 2-42 21-58 (272)
124 1rw7_A YDR533CP; alpha-beta sa 59.6 17 0.00058 32.0 6.3 40 5-44 2-52 (243)
125 1qzu_A Hypothetical protein MD 59.4 8.4 0.00029 33.0 4.0 45 4-49 17-62 (206)
126 1qkk_A DCTD, C4-dicarboxylate 59.3 27 0.00091 27.5 7.1 61 380-444 74-134 (155)
127 1f0y_A HCDH, L-3-hydroxyacyl-C 59.3 6 0.00021 36.2 3.4 34 5-43 14-47 (302)
128 2q5c_A NTRC family transcripti 59.1 35 0.0012 28.8 7.9 41 99-142 129-170 (196)
129 3slg_A PBGP3 protein; structur 58.9 20 0.00067 33.6 7.1 39 1-43 19-58 (372)
130 3ezx_A MMCP 1, monomethylamine 58.8 13 0.00046 32.0 5.3 46 5-50 91-136 (215)
131 3u7q_B Nitrogenase molybdenum- 58.7 65 0.0022 31.9 10.9 34 100-138 429-469 (523)
132 2ph1_A Nucleotide-binding prot 58.3 69 0.0024 28.1 10.3 39 6-44 17-57 (262)
133 3r6d_A NAD-dependent epimerase 58.2 12 0.0004 32.1 4.9 37 4-43 2-39 (221)
134 1evy_A Glycerol-3-phosphate de 58.2 4.6 0.00016 38.2 2.4 33 5-42 14-46 (366)
135 1g63_A Epidermin modifying enz 58.2 9.1 0.00031 32.1 4.0 41 8-49 4-44 (181)
136 1p3y_1 MRSD protein; flavoprot 58.1 6.7 0.00023 33.3 3.2 42 6-48 8-49 (194)
137 1gsa_A Glutathione synthetase; 58.1 8.2 0.00028 35.2 4.1 38 6-43 1-41 (316)
138 1bg6_A N-(1-D-carboxylethyl)-L 57.9 6.9 0.00024 36.6 3.6 33 5-42 3-35 (359)
139 3kjh_A CO dehydrogenase/acetyl 57.4 7.3 0.00025 34.1 3.6 38 7-44 1-38 (254)
140 3dfz_A SIRC, precorrin-2 dehyd 57.0 95 0.0032 26.7 12.7 151 276-448 26-186 (223)
141 3f6r_A Flavodoxin; FMN binding 56.7 14 0.00047 29.4 4.8 39 6-44 1-40 (148)
142 4huj_A Uncharacterized protein 56.5 4.2 0.00014 35.3 1.7 34 4-42 21-54 (220)
143 2qs7_A Uncharacterized protein 56.2 15 0.00053 29.3 4.9 42 8-49 9-51 (144)
144 3pdi_A Nitrogenase MOFE cofact 55.7 43 0.0015 32.9 9.0 34 100-138 392-425 (483)
145 3hwr_A 2-dehydropantoate 2-red 55.3 7.8 0.00027 35.8 3.5 42 5-51 18-59 (318)
146 1ydg_A Trp repressor binding p 55.2 15 0.00053 31.2 5.2 44 1-44 1-45 (211)
147 3doj_A AT3G25530, dehydrogenas 55.1 9.6 0.00033 35.0 4.0 34 4-42 19-52 (310)
148 4gbj_A 6-phosphogluconate dehy 55.1 9.9 0.00034 34.7 4.1 29 8-41 7-35 (297)
149 3hn2_A 2-dehydropantoate 2-red 55.0 12 0.00041 34.3 4.7 39 7-51 3-41 (312)
150 3obb_A Probable 3-hydroxyisobu 54.6 10 0.00034 34.7 4.0 32 6-42 3-34 (300)
151 2b8t_A Thymidine kinase; deoxy 54.0 79 0.0027 27.2 9.5 39 6-44 11-50 (223)
152 3ih5_A Electron transfer flavo 53.9 4.7 0.00016 35.0 1.5 111 6-141 3-124 (217)
153 3u7q_A Nitrogenase molybdenum- 53.7 48 0.0017 32.6 9.0 34 100-138 408-441 (492)
154 2gk4_A Conserved hypothetical 53.7 17 0.00057 31.8 5.1 23 22-44 31-53 (232)
155 2h78_A Hibadh, 3-hydroxyisobut 53.6 10 0.00036 34.5 4.0 33 5-42 2-34 (302)
156 2q62_A ARSH; alpha/beta, flavo 52.7 18 0.00062 31.9 5.2 40 3-42 31-73 (247)
157 2ark_A Flavodoxin; FMN, struct 52.6 16 0.00055 30.5 4.8 41 4-44 2-44 (188)
158 4hs4_A Chromate reductase; tri 52.4 7.7 0.00026 33.1 2.7 38 1-38 1-40 (199)
159 3lyu_A Putative hydrogenase; t 51.7 15 0.0005 29.2 4.1 36 7-45 19-54 (142)
160 2vo1_A CTP synthase 1; pyrimid 51.7 15 0.00051 32.7 4.3 41 4-44 20-63 (295)
161 4ezb_A Uncharacterized conserv 51.6 7.3 0.00025 36.0 2.6 33 6-43 24-57 (317)
162 1qgu_B Protein (nitrogenase mo 51.5 75 0.0026 31.5 10.0 34 100-138 425-465 (519)
163 3l7i_A Teichoic acid biosynthe 51.5 12 0.00041 39.0 4.5 113 349-470 605-722 (729)
164 3k96_A Glycerol-3-phosphate de 51.5 8.3 0.00028 36.3 3.0 34 5-43 28-61 (356)
165 1g3q_A MIND ATPase, cell divis 51.3 16 0.00055 31.6 4.7 39 6-44 1-41 (237)
166 1lss_A TRK system potassium up 51.0 10 0.00035 29.5 3.1 32 6-42 4-35 (140)
167 3dfu_A Uncharacterized protein 50.7 11 0.00037 33.0 3.4 34 5-43 5-38 (232)
168 2lnd_A De novo designed protei 50.0 10 0.00034 26.4 2.4 48 380-428 50-100 (112)
169 1wcv_1 SOJ, segregation protei 49.7 14 0.00046 32.8 4.0 44 1-44 1-45 (257)
170 1mio_A Nitrogenase molybdenum 49.6 1E+02 0.0035 30.6 10.6 35 99-138 446-480 (533)
171 3bbn_B Ribosomal protein S2; s 49.6 8.3 0.00028 33.7 2.4 31 111-141 157-189 (231)
172 1ehi_A LMDDL2, D-alanine:D-lac 49.5 15 0.00051 34.8 4.5 38 5-42 2-44 (377)
173 2r6j_A Eugenol synthase 1; phe 48.9 14 0.00049 33.7 4.1 39 1-43 5-44 (318)
174 3g0o_A 3-hydroxyisobutyrate de 48.9 9.8 0.00034 34.8 3.0 33 5-42 6-38 (303)
175 1wrd_A TOM1, target of MYB pro 48.8 47 0.0016 24.7 6.2 48 413-467 2-49 (103)
176 3goc_A Endonuclease V; alpha-b 48.5 27 0.00091 30.4 5.4 41 98-138 94-141 (237)
177 1hdo_A Biliverdin IX beta redu 48.4 22 0.00076 29.6 5.1 33 7-43 4-36 (206)
178 3i83_A 2-dehydropantoate 2-red 48.3 16 0.00054 33.6 4.4 39 7-51 3-41 (320)
179 3zzm_A Bifunctional purine bio 48.1 48 0.0016 32.4 7.5 99 5-122 8-113 (523)
180 1yb4_A Tartronic semialdehyde 47.9 16 0.00055 32.9 4.3 31 6-41 3-33 (295)
181 3dm5_A SRP54, signal recogniti 47.5 32 0.0011 33.3 6.4 42 6-47 100-141 (443)
182 3ouz_A Biotin carboxylase; str 47.1 47 0.0016 32.0 7.7 34 6-44 6-39 (446)
183 2zki_A 199AA long hypothetical 46.9 19 0.00065 30.2 4.4 38 6-44 4-42 (199)
184 3rkr_A Short chain oxidoreduct 46.5 25 0.00086 31.0 5.3 32 8-42 30-61 (262)
185 1rcu_A Conserved hypothetical 45.9 90 0.0031 26.2 8.3 97 269-388 46-149 (195)
186 4hb9_A Similarities with proba 45.5 14 0.00046 35.1 3.5 30 7-41 2-31 (412)
187 1p9o_A Phosphopantothenoylcyst 45.4 14 0.00049 33.9 3.4 37 9-45 40-90 (313)
188 1cp2_A CP2, nitrogenase iron p 45.4 21 0.00071 31.6 4.5 38 6-43 1-38 (269)
189 1tvm_A PTS system, galactitol- 45.3 42 0.0014 25.4 5.6 39 4-42 19-58 (113)
190 1psw_A ADP-heptose LPS heptosy 45.3 1.8E+02 0.0061 26.4 11.5 100 8-141 182-289 (348)
191 3rpe_A MDAB, modulator of drug 45.1 23 0.00078 30.6 4.5 40 3-42 22-68 (218)
192 2ehd_A Oxidoreductase, oxidore 45.0 29 0.00099 29.8 5.4 37 1-42 1-37 (234)
193 2w36_A Endonuclease V; hypoxan 45.0 30 0.001 29.9 5.2 41 99-139 91-138 (225)
194 4gwg_A 6-phosphogluconate dehy 44.7 12 0.00041 36.8 3.0 35 3-42 1-35 (484)
195 3pdu_A 3-hydroxyisobutyrate de 44.7 14 0.00047 33.4 3.2 32 6-42 1-32 (287)
196 3io3_A DEHA2D07832P; chaperone 44.7 67 0.0023 29.9 8.0 39 6-44 17-58 (348)
197 1qyd_A Pinoresinol-lariciresin 44.5 19 0.00065 32.6 4.3 34 6-43 4-37 (313)
198 2a33_A Hypothetical protein; s 44.4 64 0.0022 27.7 7.2 102 271-389 35-147 (215)
199 2ptg_A Enoyl-acyl carrier redu 44.3 31 0.0011 31.5 5.7 38 1-41 2-42 (319)
200 3tov_A Glycosyl transferase fa 44.2 1.3E+02 0.0044 27.8 10.0 99 8-141 187-289 (349)
201 2gdz_A NAD+-dependent 15-hydro 44.2 32 0.0011 30.4 5.6 39 1-42 1-39 (267)
202 3g79_A NDP-N-acetyl-D-galactos 44.2 23 0.00078 34.8 4.9 36 4-44 16-53 (478)
203 4gi5_A Quinone reductase; prot 44.0 35 0.0012 30.7 5.7 39 4-42 20-61 (280)
204 3v2h_A D-beta-hydroxybutyrate 44.0 23 0.00078 31.8 4.6 33 7-42 25-57 (281)
205 2fb6_A Conserved hypothetical 43.9 22 0.00075 27.2 3.8 38 7-44 8-49 (117)
206 2vrn_A Protease I, DR1199; cys 43.8 52 0.0018 27.3 6.6 41 3-44 6-46 (190)
207 1hyq_A MIND, cell division inh 43.7 20 0.00067 31.7 4.1 38 7-44 2-41 (263)
208 2g1u_A Hypothetical protein TM 43.5 25 0.00085 28.1 4.4 34 5-43 18-51 (155)
209 3orf_A Dihydropteridine reduct 43.3 24 0.00081 31.0 4.5 36 5-43 20-55 (251)
210 3b6i_A Flavoprotein WRBA; flav 43.0 28 0.00097 29.0 4.8 39 6-44 1-41 (198)
211 4e12_A Diketoreductase; oxidor 42.9 19 0.00065 32.4 3.9 32 6-42 4-35 (283)
212 1vpd_A Tartronate semialdehyde 42.9 23 0.0008 31.9 4.5 31 7-42 6-36 (299)
213 2r85_A PURP protein PF1517; AT 42.6 21 0.00073 32.7 4.3 33 6-44 2-34 (334)
214 3qha_A Putative oxidoreductase 42.6 13 0.00046 33.7 2.8 32 6-42 15-46 (296)
215 3sbx_A Putative uncharacterize 42.5 33 0.0011 28.8 4.9 38 5-43 12-53 (189)
216 3ic5_A Putative saccharopine d 42.3 22 0.00074 26.5 3.6 32 6-42 5-37 (118)
217 3ot1_A 4-methyl-5(B-hydroxyeth 42.2 42 0.0014 28.4 5.9 37 6-43 9-45 (208)
218 2raf_A Putative dinucleotide-b 42.0 20 0.00069 30.6 3.7 33 5-42 18-50 (209)
219 3gem_A Short chain dehydrogena 42.0 20 0.00067 31.8 3.8 33 8-43 28-60 (260)
220 3ug7_A Arsenical pump-driving 42.0 21 0.00073 33.3 4.2 49 5-54 24-73 (349)
221 2x4g_A Nucleoside-diphosphate- 41.9 27 0.00093 32.0 5.0 35 5-43 12-46 (342)
222 1ks9_A KPA reductase;, 2-dehyd 41.8 19 0.00066 32.2 3.8 32 7-43 1-32 (291)
223 2jk1_A HUPR, hydrogenase trans 41.8 64 0.0022 24.5 6.6 62 380-444 71-132 (139)
224 1e7w_A Pteridine reductase; di 41.7 28 0.00097 31.3 4.9 31 8-41 10-40 (291)
225 3q0i_A Methionyl-tRNA formyltr 41.7 33 0.0011 31.5 5.3 33 5-42 6-38 (318)
226 3i4f_A 3-oxoacyl-[acyl-carrier 41.7 28 0.00097 30.6 4.9 35 5-42 5-39 (264)
227 1z82_A Glycerol-3-phosphate de 41.5 18 0.00061 33.5 3.5 32 6-42 14-45 (335)
228 3dii_A Short-chain dehydrogena 41.3 26 0.0009 30.6 4.5 34 6-42 1-34 (247)
229 3lf2_A Short chain oxidoreduct 41.3 31 0.0011 30.5 5.0 39 1-42 1-40 (265)
230 1u9c_A APC35852; structural ge 41.2 48 0.0016 28.4 6.1 38 7-44 6-52 (224)
231 3ew7_A LMO0794 protein; Q8Y8U8 40.9 30 0.001 29.2 4.8 33 7-43 1-33 (221)
232 2xdo_A TETX2 protein; tetracyc 40.6 20 0.00069 33.9 3.9 38 1-43 21-58 (398)
233 3lrx_A Putative hydrogenase; a 40.5 23 0.00079 28.6 3.7 37 7-46 24-60 (158)
234 4dmm_A 3-oxoacyl-[acyl-carrier 40.3 33 0.0011 30.4 5.1 33 7-42 28-60 (269)
235 3s55_A Putative short-chain de 40.2 33 0.0011 30.6 5.1 32 8-42 11-42 (281)
236 1t1j_A Hypothetical protein; s 40.0 43 0.0015 26.0 4.9 34 5-38 6-47 (125)
237 1mio_B Nitrogenase molybdenum 39.9 93 0.0032 30.2 8.6 34 100-138 376-409 (458)
238 1e4e_A Vancomycin/teicoplanin 39.9 19 0.00066 33.4 3.5 38 5-42 2-43 (343)
239 3zq6_A Putative arsenical pump 39.9 28 0.00096 32.0 4.6 38 7-44 14-52 (324)
240 2afh_E Nitrogenase iron protei 39.8 30 0.001 31.0 4.8 38 6-43 2-39 (289)
241 3l77_A Short-chain alcohol deh 39.7 30 0.001 29.8 4.6 33 7-42 2-34 (235)
242 3euw_A MYO-inositol dehydrogen 39.6 1.9E+02 0.0064 26.5 10.4 124 284-428 6-139 (344)
243 4e21_A 6-phosphogluconate dehy 39.5 17 0.00057 34.2 3.0 33 5-42 21-53 (358)
244 3ged_A Short-chain dehydrogena 39.5 28 0.00096 30.7 4.3 35 6-43 1-35 (247)
245 4dqx_A Probable oxidoreductase 39.4 34 0.0012 30.5 5.0 33 7-42 27-59 (277)
246 3pnx_A Putative sulfurtransfer 39.3 52 0.0018 26.7 5.6 43 9-51 8-50 (160)
247 3end_A Light-independent proto 39.2 33 0.0011 31.1 4.9 38 6-43 41-78 (307)
248 2i87_A D-alanine-D-alanine lig 39.1 15 0.00052 34.4 2.7 39 4-42 1-43 (364)
249 2vpq_A Acetyl-COA carboxylase; 39.1 60 0.0021 31.2 7.1 32 7-43 2-33 (451)
250 3of5_A Dethiobiotin synthetase 39.0 36 0.0012 29.5 4.9 38 4-41 2-40 (228)
251 1ydh_A AT5G11950; structural g 39.0 22 0.00076 30.6 3.5 99 270-389 30-143 (216)
252 1xmp_A PURE, phosphoribosylami 38.8 1.6E+02 0.0055 24.0 10.2 143 282-452 10-166 (170)
253 2o2s_A Enoyl-acyl carrier redu 38.7 38 0.0013 30.8 5.3 39 1-41 2-42 (315)
254 2d1y_A Hypothetical protein TT 38.3 38 0.0013 29.7 5.1 39 1-43 1-39 (256)
255 2hy5_A Putative sulfurtransfer 38.2 57 0.002 25.2 5.6 37 8-44 2-42 (130)
256 2ag5_A DHRS6, dehydrogenase/re 38.1 44 0.0015 29.0 5.4 38 1-42 1-38 (246)
257 2hy5_B Intracellular sulfur ox 38.0 53 0.0018 25.8 5.3 40 6-45 5-47 (136)
258 3r8n_B 30S ribosomal protein S 38.0 30 0.001 29.8 4.1 32 110-141 148-181 (218)
259 3l6d_A Putative oxidoreductase 38.0 18 0.0006 33.1 2.8 33 5-42 8-40 (306)
260 3pxx_A Carveol dehydrogenase; 37.9 39 0.0013 30.1 5.2 32 8-42 11-42 (287)
261 3ga2_A Endonuclease V; alpha-b 37.9 35 0.0012 29.9 4.4 40 99-138 97-143 (246)
262 2a4k_A 3-oxoacyl-[acyl carrier 37.8 38 0.0013 29.9 5.1 38 1-42 1-38 (263)
263 2b69_A UDP-glucuronate decarbo 37.7 34 0.0012 31.5 4.9 35 4-42 25-59 (343)
264 1u7z_A Coenzyme A biosynthesis 37.7 36 0.0012 29.5 4.6 23 22-44 36-58 (226)
265 3osu_A 3-oxoacyl-[acyl-carrier 37.6 40 0.0014 29.3 5.1 34 6-42 3-36 (246)
266 2a33_A Hypothetical protein; s 37.6 54 0.0018 28.1 5.7 39 5-43 12-54 (215)
267 4eso_A Putative oxidoreductase 37.5 40 0.0014 29.6 5.1 32 8-42 9-40 (255)
268 4da9_A Short-chain dehydrogena 37.4 41 0.0014 30.0 5.3 33 7-42 29-61 (280)
269 3awd_A GOX2181, putative polyo 37.4 32 0.0011 30.1 4.4 33 8-43 14-46 (260)
270 3sju_A Keto reductase; short-c 37.3 32 0.0011 30.7 4.5 34 6-42 23-56 (279)
271 3s40_A Diacylglycerol kinase; 37.3 43 0.0015 30.5 5.4 44 1-44 3-49 (304)
272 4eg0_A D-alanine--D-alanine li 37.3 51 0.0018 30.0 6.0 39 6-44 13-55 (317)
273 3k9g_A PF-32 protein; ssgcid, 37.3 28 0.00095 30.8 4.1 38 6-44 26-65 (267)
274 3u7i_A FMN-dependent NADH-azor 36.5 30 0.001 29.9 4.0 40 3-42 1-49 (223)
275 1xkq_A Short-chain reductase f 36.3 45 0.0015 29.7 5.3 38 1-42 1-38 (280)
276 2pd4_A Enoyl-[acyl-carrier-pro 36.3 47 0.0016 29.4 5.4 40 1-43 1-41 (275)
277 1spx_A Short-chain reductase f 36.2 52 0.0018 29.1 5.8 38 1-42 1-38 (278)
278 3nrc_A Enoyl-[acyl-carrier-pro 36.1 71 0.0024 28.3 6.6 34 8-44 27-62 (280)
279 3lqk_A Dipicolinate synthase s 35.9 1.9E+02 0.0065 24.3 8.8 138 282-429 7-186 (201)
280 3guy_A Short-chain dehydrogena 35.9 27 0.00093 30.0 3.7 33 7-42 1-33 (230)
281 3h7a_A Short chain dehydrogena 35.8 39 0.0013 29.6 4.8 33 7-42 7-39 (252)
282 2q3e_A UDP-glucose 6-dehydroge 35.7 29 0.00098 33.9 4.1 32 6-42 5-38 (467)
283 3p0r_A Azoreductase; structura 35.7 30 0.001 29.5 3.8 37 6-42 4-47 (211)
284 4f3r_A Phosphopantetheine aden 35.7 35 0.0012 27.8 4.0 40 3-42 1-40 (162)
285 3rg8_A Phosphoribosylaminoimid 35.7 1.4E+02 0.0049 24.0 7.4 138 284-448 3-149 (159)
286 4h15_A Short chain alcohol deh 35.6 53 0.0018 29.1 5.6 33 7-42 11-43 (261)
287 2zts_A Putative uncharacterize 35.6 87 0.003 26.8 7.1 43 8-50 32-75 (251)
288 3kcn_A Adenylate cyclase homol 35.3 74 0.0025 24.6 6.0 63 380-446 75-139 (151)
289 3c1o_A Eugenol synthase; pheny 35.3 34 0.0012 31.0 4.4 34 6-43 4-37 (321)
290 3ppi_A 3-hydroxyacyl-COA dehyd 35.2 46 0.0016 29.6 5.2 33 7-42 30-62 (281)
291 3s2u_A UDP-N-acetylglucosamine 35.1 65 0.0022 30.0 6.4 26 359-386 92-120 (365)
292 2l2q_A PTS system, cellobiose- 35.1 47 0.0016 24.8 4.4 36 7-42 5-40 (109)
293 3ego_A Probable 2-dehydropanto 35.0 20 0.00069 32.7 2.7 39 7-51 3-42 (307)
294 3l4b_C TRKA K+ channel protien 34.9 15 0.00051 31.5 1.7 32 7-43 1-32 (218)
295 3pgx_A Carveol dehydrogenase; 34.7 45 0.0015 29.6 5.1 32 8-42 16-47 (280)
296 1geg_A Acetoin reductase; SDR 34.7 39 0.0013 29.6 4.5 33 7-42 2-34 (256)
297 3fwz_A Inner membrane protein 34.6 20 0.00067 28.2 2.3 33 7-44 8-40 (140)
298 1fjh_A 3alpha-hydroxysteroid d 34.6 39 0.0013 29.5 4.5 33 7-42 1-33 (257)
299 3f2v_A General stress protein 34.6 25 0.00086 29.6 3.0 37 6-42 1-38 (192)
300 3grp_A 3-oxoacyl-(acyl carrier 34.4 53 0.0018 29.0 5.4 32 8-42 28-59 (266)
301 3p19_A BFPVVD8, putative blue 34.3 36 0.0012 30.2 4.3 33 7-42 16-48 (266)
302 2vns_A Metalloreductase steap3 34.2 25 0.00085 30.1 3.0 33 5-42 27-59 (215)
303 4em8_A Ribose 5-phosphate isom 34.2 57 0.002 26.1 4.8 39 2-43 3-42 (148)
304 1sb8_A WBPP; epimerase, 4-epim 34.1 37 0.0013 31.3 4.6 34 5-42 26-59 (352)
305 3dtt_A NADP oxidoreductase; st 34.1 32 0.0011 30.1 3.8 33 5-42 18-50 (245)
306 2pd6_A Estradiol 17-beta-dehyd 34.0 52 0.0018 28.7 5.3 33 7-42 7-39 (264)
307 3ucx_A Short chain dehydrogena 34.0 53 0.0018 28.9 5.4 33 7-42 11-43 (264)
308 3e5n_A D-alanine-D-alanine lig 34.0 25 0.00086 33.3 3.3 41 3-43 19-63 (386)
309 3i12_A D-alanine-D-alanine lig 34.0 25 0.00087 33.0 3.3 40 4-43 1-44 (364)
310 1x0v_A GPD-C, GPDH-C, glycerol 33.7 14 0.00046 34.6 1.3 38 2-44 4-48 (354)
311 3ea0_A ATPase, para family; al 33.7 31 0.0011 29.8 3.7 39 6-44 3-44 (245)
312 1t5b_A Acyl carrier protein ph 33.7 41 0.0014 28.0 4.4 38 6-43 1-44 (201)
313 3ioy_A Short-chain dehydrogena 33.6 57 0.0019 29.8 5.6 33 7-42 8-40 (319)
314 3edm_A Short chain dehydrogena 33.5 43 0.0015 29.4 4.7 33 7-42 8-40 (259)
315 3bul_A Methionine synthase; tr 33.5 43 0.0015 33.6 5.0 47 6-52 98-144 (579)
316 2dzd_A Pyruvate carboxylase; b 33.5 44 0.0015 32.4 5.1 39 1-44 1-39 (461)
317 1ydh_A AT5G11950; structural g 33.4 67 0.0023 27.6 5.6 39 5-43 8-50 (216)
318 1vhq_A Enhancing lycopene bios 33.4 78 0.0027 27.3 6.3 43 1-44 1-48 (232)
319 1pzg_A LDH, lactate dehydrogen 33.4 24 0.00082 32.7 3.0 34 5-43 8-42 (331)
320 3sc4_A Short chain dehydrogena 33.1 43 0.0015 30.0 4.6 34 7-43 9-42 (285)
321 3tfo_A Putative 3-oxoacyl-(acy 32.9 52 0.0018 29.1 5.1 33 7-42 4-36 (264)
322 2pn1_A Carbamoylphosphate synt 32.8 45 0.0015 30.5 4.8 34 4-43 2-37 (331)
323 1iow_A DD-ligase, DDLB, D-ALA\ 32.8 54 0.0019 29.4 5.4 38 7-44 3-44 (306)
324 3g17_A Similar to 2-dehydropan 32.8 12 0.00042 33.9 0.8 32 7-43 3-34 (294)
325 2c20_A UDP-glucose 4-epimerase 32.8 31 0.0011 31.4 3.7 33 6-42 1-33 (330)
326 2o3j_A UDP-glucose 6-dehydroge 32.7 38 0.0013 33.2 4.5 34 4-42 7-42 (481)
327 1zmt_A Haloalcohol dehalogenas 32.7 38 0.0013 29.6 4.2 33 7-42 1-33 (254)
328 2c5a_A GDP-mannose-3', 5'-epim 32.6 51 0.0017 30.8 5.3 35 5-43 28-62 (379)
329 4dgk_A Phytoene dehydrogenase; 32.5 19 0.00064 35.4 2.2 31 6-41 1-31 (501)
330 2wsb_A Galactitol dehydrogenas 32.5 57 0.0019 28.3 5.3 32 8-42 12-43 (254)
331 3op4_A 3-oxoacyl-[acyl-carrier 32.4 60 0.002 28.2 5.4 33 7-42 9-41 (248)
332 3pk0_A Short-chain dehydrogena 32.4 60 0.002 28.5 5.4 32 8-42 11-42 (262)
333 1i36_A Conserved hypothetical 32.4 27 0.00093 30.8 3.1 30 7-41 1-30 (264)
334 3lp6_A Phosphoribosylaminoimid 32.3 2.1E+02 0.0071 23.5 10.7 140 282-448 6-156 (174)
335 1sqs_A Conserved hypothetical 32.3 44 0.0015 29.1 4.4 37 6-42 1-41 (242)
336 3d7n_A Flavodoxin, WRBA-like p 32.2 15 0.00052 30.8 1.3 37 1-37 1-38 (193)
337 3e18_A Oxidoreductase; dehydro 32.2 2.4E+02 0.0083 25.9 9.9 123 284-428 7-139 (359)
338 3f8d_A Thioredoxin reductase ( 32.0 33 0.0011 30.9 3.7 32 7-43 16-47 (323)
339 2rcy_A Pyrroline carboxylate r 32.0 15 0.00052 32.5 1.3 34 4-42 2-39 (262)
340 2vzf_A NADH-dependent FMN redu 31.9 47 0.0016 27.8 4.4 38 6-43 2-43 (197)
341 3cky_A 2-hydroxymethyl glutara 31.9 37 0.0013 30.6 4.0 32 6-42 4-35 (301)
342 2p91_A Enoyl-[acyl-carrier-pro 31.9 66 0.0023 28.6 5.7 34 8-43 22-56 (285)
343 2gas_A Isoflavone reductase; N 31.9 35 0.0012 30.7 3.8 34 6-43 2-35 (307)
344 3gvc_A Oxidoreductase, probabl 31.9 57 0.0019 29.0 5.2 32 8-42 30-61 (277)
345 2hna_A Protein MIOC, flavodoxi 31.9 53 0.0018 25.8 4.5 36 6-41 1-37 (147)
346 1txg_A Glycerol-3-phosphate de 31.8 25 0.00084 32.3 2.8 31 7-42 1-31 (335)
347 2rhc_B Actinorhodin polyketide 31.8 58 0.002 28.9 5.3 32 8-42 23-54 (277)
348 3lzw_A Ferredoxin--NADP reduct 31.7 16 0.00054 33.3 1.4 35 5-44 6-40 (332)
349 3q2i_A Dehydrogenase; rossmann 31.6 1.8E+02 0.0061 26.8 8.8 127 284-429 15-150 (354)
350 1xgk_A Nitrogen metabolite rep 31.6 42 0.0014 31.2 4.4 34 6-43 5-38 (352)
351 3ruf_A WBGU; rossmann fold, UD 31.5 44 0.0015 30.7 4.6 34 5-42 24-57 (351)
352 2z04_A Phosphoribosylaminoimid 31.5 50 0.0017 30.7 4.9 34 6-44 1-34 (365)
353 2cvz_A Dehydrogenase, 3-hydrox 31.5 26 0.0009 31.3 2.9 31 6-42 1-31 (289)
354 3oow_A Phosphoribosylaminoimid 31.5 2.1E+02 0.0072 23.2 10.2 143 284-453 6-161 (166)
355 1xq6_A Unknown protein; struct 31.5 60 0.0021 27.9 5.3 36 4-43 2-39 (253)
356 3qvl_A Putative hydantoin race 31.4 1.5E+02 0.0052 25.8 7.8 37 7-43 2-39 (245)
357 3rwb_A TPLDH, pyridoxal 4-dehy 31.3 55 0.0019 28.4 5.0 38 1-42 1-38 (247)
358 3ax6_A Phosphoribosylaminoimid 31.3 65 0.0022 30.1 5.8 33 6-43 1-33 (380)
359 3uce_A Dehydrogenase; rossmann 31.3 35 0.0012 29.1 3.6 33 7-42 6-38 (223)
360 3e8x_A Putative NAD-dependent 31.3 59 0.002 27.8 5.1 35 5-43 20-54 (236)
361 3rih_A Short chain dehydrogena 31.2 63 0.0022 29.1 5.4 32 8-42 42-73 (293)
362 4hcj_A THIJ/PFPI domain protei 31.2 88 0.003 25.7 5.9 36 8-44 10-45 (177)
363 2nwq_A Probable short-chain de 31.2 47 0.0016 29.5 4.5 32 8-42 22-53 (272)
364 1oi4_A Hypothetical protein YH 31.1 1E+02 0.0035 25.5 6.5 38 6-44 23-60 (193)
365 3grc_A Sensor protein, kinase; 31.1 1.2E+02 0.0043 22.7 6.7 59 1-72 1-59 (140)
366 2x3n_A Probable FAD-dependent 31.0 28 0.00096 32.8 3.2 34 4-42 4-37 (399)
367 3dhn_A NAD-dependent epimerase 31.0 47 0.0016 28.1 4.4 34 6-43 4-37 (227)
368 2d1p_B TUSC, hypothetical UPF0 31.0 76 0.0026 24.0 5.1 38 8-45 3-43 (119)
369 3ado_A Lambda-crystallin; L-gu 30.9 25 0.00084 32.4 2.5 38 1-43 1-38 (319)
370 3e9m_A Oxidoreductase, GFO/IDH 30.9 2.4E+02 0.0083 25.5 9.6 110 284-411 7-124 (330)
371 1e6u_A GDP-fucose synthetase; 30.8 35 0.0012 30.9 3.6 32 6-41 3-34 (321)
372 4iiu_A 3-oxoacyl-[acyl-carrier 30.7 54 0.0019 28.8 4.9 34 6-42 25-58 (267)
373 2i2c_A Probable inorganic poly 30.7 20 0.00068 32.2 1.9 49 364-428 38-92 (272)
374 3ius_A Uncharacterized conserv 30.7 47 0.0016 29.4 4.5 34 6-44 5-38 (286)
375 2d1p_A TUSD, hypothetical UPF0 30.6 1E+02 0.0034 24.3 5.8 38 7-44 13-54 (140)
376 1jay_A Coenzyme F420H2:NADP+ o 30.5 37 0.0013 28.6 3.6 31 7-42 1-32 (212)
377 2iz1_A 6-phosphogluconate dehy 30.4 28 0.00097 34.0 3.1 34 4-42 3-36 (474)
378 1qyc_A Phenylcoumaran benzylic 30.4 40 0.0014 30.3 4.0 34 6-43 4-37 (308)
379 4dyv_A Short-chain dehydrogena 30.3 55 0.0019 29.1 4.8 33 7-42 28-60 (272)
380 1zk4_A R-specific alcohol dehy 30.3 69 0.0024 27.6 5.5 32 8-42 7-38 (251)
381 2hpv_A FMN-dependent NADH-azor 30.2 48 0.0016 27.9 4.2 38 6-43 1-45 (208)
382 2lpm_A Two-component response 30.1 39 0.0013 26.0 3.2 35 102-138 46-85 (123)
383 4g65_A TRK system potassium up 29.9 16 0.00056 35.6 1.2 33 6-43 3-35 (461)
384 3enk_A UDP-glucose 4-epimerase 29.9 57 0.002 29.7 5.0 20 23-42 18-37 (341)
385 1xjc_A MOBB protein homolog; s 29.8 82 0.0028 25.8 5.4 39 6-44 4-42 (169)
386 3qjg_A Epidermin biosynthesis 29.8 1.5E+02 0.0052 24.3 7.0 115 283-408 6-143 (175)
387 3vps_A TUNA, NAD-dependent epi 29.8 47 0.0016 29.9 4.4 34 6-43 7-40 (321)
388 1nff_A Putative oxidoreductase 29.8 75 0.0026 27.8 5.6 32 8-42 8-39 (260)
389 2z1m_A GDP-D-mannose dehydrata 29.7 50 0.0017 30.1 4.6 32 7-42 4-35 (345)
390 3to5_A CHEY homolog; alpha(5)b 29.7 77 0.0026 24.6 5.0 32 111-142 57-97 (134)
391 3f5d_A Protein YDEA; unknow pr 29.5 46 0.0016 28.3 3.9 39 5-44 2-41 (206)
392 3tjr_A Short chain dehydrogena 29.5 66 0.0023 29.0 5.3 32 8-42 32-63 (301)
393 2qh9_A UPF0215 protein AF_1433 29.5 95 0.0033 25.8 5.7 40 100-139 51-98 (184)
394 1xhl_A Short-chain dehydrogena 29.4 64 0.0022 29.0 5.2 32 8-42 27-58 (297)
395 1rcu_A Conserved hypothetical 29.4 75 0.0026 26.7 5.1 37 5-41 22-65 (195)
396 3oec_A Carveol dehydrogenase ( 29.4 61 0.0021 29.5 5.1 32 8-42 47-78 (317)
397 2ahr_A Putative pyrroline carb 29.4 33 0.0011 30.1 3.1 33 5-42 2-34 (259)
398 2wyu_A Enoyl-[acyl carrier pro 29.4 39 0.0013 29.7 3.6 34 8-43 9-43 (261)
399 1mv8_A GMD, GDP-mannose 6-dehy 29.3 49 0.0017 31.9 4.5 31 7-42 1-31 (436)
400 3gvi_A Malate dehydrogenase; N 29.3 32 0.0011 31.7 3.1 38 2-44 3-41 (324)
401 2qxy_A Response regulator; reg 29.3 1E+02 0.0035 23.3 5.9 48 380-429 74-121 (142)
402 3o26_A Salutaridine reductase; 29.3 55 0.0019 29.3 4.8 33 7-42 12-44 (311)
403 2uyy_A N-PAC protein; long-cha 29.3 38 0.0013 30.8 3.6 32 6-42 30-61 (316)
404 3r6w_A FMN-dependent NADH-azor 29.2 35 0.0012 29.0 3.1 38 6-43 1-44 (212)
405 2c5m_A CTP synthase; cytidine 29.2 36 0.0012 30.1 3.1 40 5-44 21-63 (294)
406 2qhx_A Pteridine reductase 1; 29.2 59 0.002 29.8 4.9 31 8-41 47-77 (328)
407 3v8b_A Putative dehydrogenase, 29.1 56 0.0019 29.2 4.7 32 8-42 29-60 (283)
408 3gl9_A Response regulator; bet 29.1 95 0.0033 22.9 5.5 41 99-141 36-85 (122)
409 3rp8_A Flavoprotein monooxygen 28.9 37 0.0013 32.1 3.6 34 4-42 21-54 (407)
410 3pef_A 6-phosphogluconate dehy 28.9 40 0.0014 30.2 3.6 31 7-42 2-32 (287)
411 3oid_A Enoyl-[acyl-carrier-pro 28.8 57 0.002 28.6 4.6 33 7-42 4-36 (258)
412 1weh_A Conserved hypothetical 28.8 61 0.0021 26.6 4.4 38 7-44 2-43 (171)
413 3pdi_B Nitrogenase MOFE cofact 28.8 47 0.0016 32.3 4.3 33 101-138 367-399 (458)
414 2cfc_A 2-(R)-hydroxypropyl-COM 28.8 58 0.002 28.1 4.6 33 7-42 2-34 (250)
415 1byi_A Dethiobiotin synthase; 28.8 48 0.0016 28.1 4.0 33 9-41 4-37 (224)
416 3c7a_A Octopine dehydrogenase; 28.8 22 0.00074 33.9 1.9 31 6-41 2-33 (404)
417 3rd5_A Mypaa.01249.C; ssgcid, 28.7 70 0.0024 28.5 5.3 32 8-42 17-48 (291)
418 3tox_A Short chain dehydrogena 28.7 53 0.0018 29.3 4.4 33 7-42 8-40 (280)
419 2zat_A Dehydrogenase/reductase 28.7 75 0.0026 27.7 5.4 32 8-42 15-46 (260)
420 3ksu_A 3-oxoacyl-acyl carrier 28.6 53 0.0018 28.9 4.4 32 8-42 12-43 (262)
421 2ekp_A 2-deoxy-D-gluconate 3-d 28.6 57 0.002 28.1 4.5 33 8-43 3-35 (239)
422 4hkt_A Inositol 2-dehydrogenas 28.6 1.7E+02 0.0059 26.5 8.1 123 284-428 5-137 (331)
423 4iin_A 3-ketoacyl-acyl carrier 28.6 70 0.0024 28.2 5.2 32 8-42 30-61 (271)
424 2q1s_A Putative nucleotide sug 28.6 49 0.0017 30.9 4.4 34 5-42 31-65 (377)
425 3fwy_A Light-independent proto 28.5 59 0.002 29.8 4.7 39 6-44 47-86 (314)
426 3to5_A CHEY homolog; alpha(5)b 28.5 41 0.0014 26.3 3.2 105 298-428 22-132 (134)
427 2ew8_A (S)-1-phenylethanol deh 28.5 67 0.0023 27.9 5.0 32 8-42 8-39 (249)
428 2dkn_A 3-alpha-hydroxysteroid 28.5 65 0.0022 27.7 4.9 32 8-42 2-33 (255)
429 3qrx_B Melittin; calcium-bindi 28.4 19 0.00066 18.6 0.7 18 370-387 1-18 (26)
430 3gg2_A Sugar dehydrogenase, UD 28.4 39 0.0013 32.8 3.6 32 7-43 3-34 (450)
431 3uxy_A Short-chain dehydrogena 28.4 51 0.0018 29.1 4.2 32 8-42 29-60 (266)
432 1u0t_A Inorganic polyphosphate 28.3 24 0.00082 32.3 2.0 32 356-389 72-107 (307)
433 2vou_A 2,6-dihydroxypyridine h 28.1 45 0.0015 31.5 4.0 34 4-42 3-36 (397)
434 3qvo_A NMRA family protein; st 28.0 59 0.002 27.9 4.5 35 6-43 22-57 (236)
435 3t4x_A Oxidoreductase, short c 28.0 81 0.0028 27.7 5.5 32 8-42 11-42 (267)
436 3r5x_A D-alanine--D-alanine li 28.0 44 0.0015 30.1 3.8 45 6-50 3-51 (307)
437 1o97_C Electron transferring f 28.0 63 0.0021 28.7 4.7 41 99-141 102-148 (264)
438 1zcj_A Peroxisomal bifunctiona 27.9 45 0.0016 32.5 4.0 34 4-42 35-68 (463)
439 4egf_A L-xylulose reductase; s 27.8 64 0.0022 28.4 4.8 32 8-42 21-52 (266)
440 3pid_A UDP-glucose 6-dehydroge 27.8 39 0.0013 32.6 3.4 32 5-42 35-66 (432)
441 3tzq_B Short-chain type dehydr 27.6 70 0.0024 28.2 5.0 33 7-42 11-43 (271)
442 3r3s_A Oxidoreductase; structu 27.6 91 0.0031 27.9 5.9 34 7-43 49-82 (294)
443 2an1_A Putative kinase; struct 27.6 28 0.00096 31.4 2.3 27 360-388 64-94 (292)
444 2gkg_A Response regulator homo 27.6 59 0.002 24.0 4.0 46 380-428 79-124 (127)
445 3rht_A (gatase1)-like protein; 27.5 32 0.0011 30.5 2.6 38 4-45 2-41 (259)
446 3t7c_A Carveol dehydrogenase; 27.4 75 0.0026 28.5 5.3 33 7-42 28-60 (299)
447 3ftp_A 3-oxoacyl-[acyl-carrier 27.3 81 0.0028 27.9 5.4 33 7-42 28-60 (270)
448 1zem_A Xylitol dehydrogenase; 27.3 72 0.0025 27.9 5.0 33 7-42 7-39 (262)
449 4fb5_A Probable oxidoreductase 27.2 1.2E+02 0.0041 28.2 6.9 42 1-42 20-64 (393)
450 3rot_A ABC sugar transporter, 27.2 3.1E+02 0.011 23.9 10.3 37 101-140 54-94 (297)
451 3f67_A Putative dienelactone h 27.2 79 0.0027 26.5 5.2 36 7-42 32-67 (241)
452 3nyw_A Putative oxidoreductase 27.1 52 0.0018 28.7 4.0 33 7-42 7-39 (250)
453 3gk3_A Acetoacetyl-COA reducta 27.1 66 0.0023 28.3 4.7 34 6-42 24-57 (269)
454 3h2s_A Putative NADH-flavin re 26.9 77 0.0026 26.7 5.0 33 7-43 1-33 (224)
455 1t35_A Hypothetical protein YV 26.9 83 0.0028 26.3 5.0 37 7-43 2-42 (191)
456 1yio_A Response regulatory pro 26.8 2.6E+02 0.0088 22.8 8.4 48 380-429 75-122 (208)
457 3hly_A Flavodoxin-like domain; 26.8 79 0.0027 25.4 4.8 38 7-44 1-39 (161)
458 3uve_A Carveol dehydrogenase ( 26.8 75 0.0026 28.2 5.1 33 7-42 11-43 (286)
459 3nbm_A PTS system, lactose-spe 26.8 60 0.002 24.3 3.6 38 4-41 4-41 (108)
460 2bi7_A UDP-galactopyranose mut 26.8 73 0.0025 29.9 5.2 33 6-43 3-35 (384)
461 3db2_A Putative NADPH-dependen 26.8 1.7E+02 0.0057 26.9 7.7 124 284-428 7-140 (354)
462 3m1a_A Putative dehydrogenase; 26.7 69 0.0024 28.3 4.9 33 7-42 5-37 (281)
463 3icc_A Putative 3-oxoacyl-(acy 26.7 81 0.0028 27.3 5.2 33 7-42 7-39 (255)
464 3imf_A Short chain dehydrogena 26.6 68 0.0023 28.0 4.7 32 8-42 7-38 (257)
465 3jx9_A Putative phosphoheptose 26.6 52 0.0018 27.0 3.6 32 8-42 80-112 (170)
466 1rkx_A CDP-glucose-4,6-dehydra 26.5 60 0.002 29.9 4.5 33 6-42 9-41 (357)
467 1v0j_A UDP-galactopyranose mut 26.5 49 0.0017 31.3 4.0 37 1-42 1-39 (399)
468 3l6e_A Oxidoreductase, short-c 26.5 66 0.0022 27.7 4.5 32 8-42 4-35 (235)
469 2pnf_A 3-oxoacyl-[acyl-carrier 26.5 1.1E+02 0.0036 26.3 6.0 32 8-42 8-39 (248)
470 3ggo_A Prephenate dehydrogenas 26.5 56 0.0019 29.9 4.2 34 5-43 32-67 (314)
471 2b9w_A Putative aminooxidase; 26.4 41 0.0014 31.9 3.5 37 1-42 1-38 (424)
472 1yde_A Retinal dehydrogenase/r 26.4 72 0.0025 28.2 4.9 32 8-42 10-41 (270)
473 2w84_A Peroxisomal membrane pr 26.4 43 0.0015 22.8 2.4 50 416-470 14-63 (70)
474 3uf0_A Short-chain dehydrogena 26.3 77 0.0026 28.0 5.0 34 7-43 31-64 (273)
475 1yt5_A Inorganic polyphosphate 26.2 22 0.00077 31.5 1.4 52 359-428 41-95 (258)
476 1wma_A Carbonyl reductase [NAD 26.2 72 0.0025 27.8 4.9 33 7-42 4-37 (276)
477 2pzm_A Putative nucleotide sug 26.2 70 0.0024 29.1 4.9 33 6-42 20-52 (330)
478 2gf2_A Hibadh, 3-hydroxyisobut 26.2 41 0.0014 30.2 3.2 31 7-42 1-31 (296)
479 2rjn_A Response regulator rece 26.1 30 0.001 27.2 2.0 61 380-444 78-139 (154)
480 3i42_A Response regulator rece 26.0 1.5E+02 0.0052 21.7 6.2 36 4-43 1-36 (127)
481 3qlj_A Short chain dehydrogena 26.0 80 0.0027 28.7 5.2 33 7-42 27-59 (322)
482 3i6i_A Putative leucoanthocyan 26.0 67 0.0023 29.5 4.8 37 4-44 8-44 (346)
483 3ihm_A Styrene monooxygenase A 26.0 35 0.0012 32.8 2.8 31 8-43 24-54 (430)
484 1ooe_A Dihydropteridine reduct 26.0 67 0.0023 27.5 4.5 32 8-42 4-35 (236)
485 3f1l_A Uncharacterized oxidore 25.9 87 0.003 27.2 5.3 33 7-42 12-44 (252)
486 2q1w_A Putative nucleotide sug 25.9 88 0.003 28.4 5.5 35 4-42 19-53 (333)
487 3nhm_A Response regulator; pro 25.9 76 0.0026 23.7 4.4 46 381-429 77-122 (133)
488 1rpn_A GDP-mannose 4,6-dehydra 25.9 69 0.0023 29.1 4.8 34 6-43 14-47 (335)
489 1u0t_A Inorganic polyphosphate 25.9 60 0.002 29.6 4.2 37 6-42 4-41 (307)
490 1qo0_D AMIR; binding protein, 25.9 2.6E+02 0.009 22.5 9.5 53 374-428 69-124 (196)
491 2zyd_A 6-phosphogluconate dehy 25.8 34 0.0012 33.5 2.7 34 4-42 13-46 (480)
492 4e6p_A Probable sorbitol dehyd 25.8 79 0.0027 27.6 5.0 32 8-42 9-40 (259)
493 1kjq_A GART 2, phosphoribosylg 25.7 1.1E+02 0.0036 28.7 6.2 34 6-44 11-44 (391)
494 3ors_A N5-carboxyaminoimidazol 25.7 2.7E+02 0.0091 22.6 8.9 138 283-449 3-155 (163)
495 4fs3_A Enoyl-[acyl-carrier-pro 25.7 1E+02 0.0034 27.0 5.6 38 1-42 1-40 (256)
496 2rk3_A Protein DJ-1; parkinson 25.7 1.3E+02 0.0044 24.9 6.1 38 6-44 3-40 (197)
497 3v2g_A 3-oxoacyl-[acyl-carrier 25.7 63 0.0022 28.6 4.3 32 8-42 32-63 (271)
498 2dtx_A Glucose 1-dehydrogenase 25.6 85 0.0029 27.5 5.2 32 8-42 9-40 (264)
499 3hr8_A Protein RECA; alpha and 25.6 3.4E+02 0.012 25.2 9.4 37 9-45 64-100 (356)
500 1mxh_A Pteridine reductase 2; 25.5 72 0.0025 28.1 4.7 32 8-42 12-43 (276)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=5.8e-69 Score=534.18 Aligned_cols=437 Identities=26% Similarity=0.461 Sum_probs=353.4
Q ss_pred CCCCCccEEEEEcCCCccCHHHHHHHHHHHHhCC--CEEEEEeCccchhhHhhcccccccccccCCCeeEEEcCCCCCCC
Q 011848 1 MEKQDHVHVAILPLPAVGHVNSMLNLAELLGHAG--IKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRD 78 (476)
Q Consensus 1 m~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rG--H~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (476)
|++.++.||+++|+|++||++|++.||+.|+++| |.|||++++.+...+.+.... . .++++|+.++++++++
T Consensus 8 M~~~~~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~~~---~---~~~i~~~~ipdglp~~ 81 (454)
T 3hbf_A 8 MNGNNLLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSNE---F---LPNIKYYNVHDGLPKG 81 (454)
T ss_dssp ----CCCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSSSC---C---CTTEEEEECCCCCCTT
T ss_pred ccCCCCCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhccccc---C---CCCceEEecCCCCCCC
Confidence 5555678999999999999999999999999999 999999997666655433210 0 3469999999998876
Q ss_pred CCCCCCChHHHHHHHHhhCcHHHHHHHHcC----CCCceEEEecCCcccHHHHHHHhCCceEEEecchhhHHHHHhhhhh
Q 011848 79 HPRTPDKFPELVDSLNCATPPLLKEMVSDS----KSPVNCIITDGYMSRAIDAAREVGVSIIYFRTISACAFWSFHCIPD 154 (476)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~----~~~~D~Ii~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~ 154 (476)
.. ...+....+..+...+.+.+++.++++ +.++||||+|.++.|+..+|+++|||++.+++++++.+..+.+.+.
T Consensus 82 ~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~ 160 (454)
T 3hbf_A 82 YV-SSGNPREPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDL 160 (454)
T ss_dssp CC-CCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHH
T ss_pred cc-ccCChHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHH
Confidence 42 222333334444444444455555543 3589999999999999999999999999999999999888877655
Q ss_pred hhhc-CCCCCCCCcccCccccccCCCCCCCCCCCCCCcccCCCCCChHHHHHHHHhhhhccCCEEEEcCccccchHHHHH
Q 011848 155 IIDA-GELPIKGTEDMDRLITTVPGMEGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQ 233 (476)
Q Consensus 155 ~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~ 233 (476)
.... +..... ......++|++.. +..++++.++.. ...+.....+.+..+...+++.+++||+++||++++++
T Consensus 161 ~~~~~~~~~~~----~~~~~~~iPg~p~-~~~~dlp~~~~~-~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~ 234 (454)
T 3hbf_A 161 IREKTGSKEVH----DVKSIDVLPGFPE-LKASDLPEGVIK-DIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENE 234 (454)
T ss_dssp HHHTCCHHHHT----TSSCBCCSTTSCC-BCGGGSCTTSSS-CTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHH
T ss_pred HHhhcCCCccc----cccccccCCCCCC-cChhhCchhhcc-CCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHH
Confidence 4322 110000 1112345788877 888889887654 44455666677777777889999999999999999999
Q ss_pred HHhcCCCCeeeeccccCcCccCCCccccCCCCcccccchhhhhhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhCCC
Q 011848 234 IRNHSCPNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKK 313 (476)
Q Consensus 234 ~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~ 313 (476)
+++ .+|++++|||++....... +..++++.+||+.++++++|||||||....+.+++.+++.+++..++
T Consensus 235 ~~~-~~~~v~~vGPl~~~~~~~~----------~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~ 303 (454)
T 3hbf_A 235 LNS-KFKLLLNVGPFNLTTPQRK----------VSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGF 303 (454)
T ss_dssp HHT-TSSCEEECCCHHHHSCCSC----------CCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCC
T ss_pred HHh-cCCCEEEECCccccccccc----------ccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCC
Confidence 999 8899999999986543211 12356789999988889999999999998889999999999999999
Q ss_pred cEEEEEcCCCCCCCCCCCCCchHHHHHhcCCceeeeccCHHHHhCcCCCCccccccChhHHHHHHHhCCceeccccccch
Q 011848 314 SFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQ 393 (476)
Q Consensus 314 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~vp~~~ll~~~~~~~~I~HgG~gs~~eal~~GvP~l~~P~~~DQ 393 (476)
+|||+++.+. ...+|++|.++.++|+++++|+||.++|+|+++++||||||+||++||+++|||||++|+++||
T Consensus 304 ~flw~~~~~~------~~~lp~~~~~~~~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ 377 (454)
T 3hbf_A 304 PFIWSFRGDP------KEKLPKGFLERTKTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQ 377 (454)
T ss_dssp CEEEECCSCH------HHHSCTTHHHHTTTTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTH
T ss_pred eEEEEeCCcc------hhcCCHhHHhhcCCceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccH
Confidence 9999997431 1247888888889999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHhhhcceeeeEEec-cccCHHHHHHHHHHHHhH-hHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 011848 394 QINSRFVGEVWKLGLDIK-DLCDRNIVEKAVNDLMVE-RKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIK 467 (476)
Q Consensus 394 ~~na~r~~e~~G~g~~~~-~~~~~~~l~~ai~~~l~~-~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~i~~l~ 467 (476)
+.||+++++.+|+|+.++ +.++.++|.++|+++|++ ++++||+||+++++++++++.+||||.+++++||+++.
T Consensus 378 ~~Na~~v~~~~g~Gv~l~~~~~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~i~ 453 (454)
T 3hbf_A 378 GLNTILTESVLEIGVGVDNGVLTKESIKKALELTMSSEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIVT 453 (454)
T ss_dssp HHHHHHHHTTSCSEEECGGGSCCHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhhCeeEEecCCCCCHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHh
Confidence 999999964379999998 689999999999999985 34589999999999999999999999999999999874
No 2
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=9.9e-66 Score=521.43 Aligned_cols=457 Identities=35% Similarity=0.698 Sum_probs=345.0
Q ss_pred CCccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCccchhhHhhccc-ccccccccCCCeeEEEcCCCCCCCC--C
Q 011848 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSS-DAFSRYMQIPGFQFKTLTDGLPRDH--P 80 (476)
Q Consensus 4 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~ 80 (476)
|+++||+++|+|++||++|++.||++|++|||+|||++++.+...+.+... ..... .++++|+.++++++... .
T Consensus 6 ~~~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~~~~---~~~i~~~~l~~~lp~~~~~~ 82 (482)
T 2pq6_A 6 NRKPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDG---FTDFNFESIPDGLTPMEGDG 82 (482)
T ss_dssp --CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC---------------CEEEEEECCCCC------
T ss_pred CCCCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhccccccccccC---CCceEEEECCCCCCCccccc
Confidence 446799999999999999999999999999999999999887666544311 00000 13699999998776521 1
Q ss_pred CCCCChHHHHHHHHhhCcHHHHHHHHcC-C----CCceEEEecCCcccHHHHHHHhCCceEEEecchhhHHHHHhhhhhh
Q 011848 81 RTPDKFPELVDSLNCATPPLLKEMVSDS-K----SPVNCIITDGYMSRAIDAAREVGVSIIYFRTISACAFWSFHCIPDI 155 (476)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~-~----~~~D~Ii~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~ 155 (476)
.....+..++..+...+.+.++++++.+ . .++|+||+|.++.|+..+|+++|||+|.++++++.......+++.+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~ 162 (482)
T 2pq6_A 83 DVSQDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSF 162 (482)
T ss_dssp ---CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHHHH
T ss_pred CcchhHHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHHHHHH
Confidence 1223455556666567788888988865 2 4899999999999999999999999999999998877766666666
Q ss_pred hhcCCCCCCCCc----c-cCccccccCCCCCCCCCCCCCCcccCCCCCChHHHHHHHHhhhhccCCEEEEcCccccchHH
Q 011848 156 IDAGELPIKGTE----D-MDRLITTVPGMEGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPI 230 (476)
Q Consensus 156 ~~~~~~p~~~~~----~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~ 230 (476)
...++.|..... + +.+...+++++.. +...+++.++............+.+..+...+++.+|+|++++||++.
T Consensus 163 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~nt~~~le~~~ 241 (482)
T 2pq6_A 163 VERGIIPFKDESYLTNGCLETKVDWIPGLKN-FRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELESDV 241 (482)
T ss_dssp HHTTCSSCSSGGGGTSSGGGCBCCSSTTCCS-CBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCTTCCEEESSCGGGGHHH
T ss_pred HhcCCCCCccccccccccccCccccCCCCCC-CchHHCchhhccCCcccHHHHHHHHHHHhhccCCEEEEcChHHHhHHH
Confidence 566776654320 0 1122234455544 445555554433222334444444455556788999999999999999
Q ss_pred HHHHHhcCCCCeeeeccccCc-CccCCCccccC-CCCcccccchhhhhhhcCCCCceEEEEecccccCCHHHHHHHHHHH
Q 011848 231 LSQIRNHSCPNIYSIGPLNAH-LKVRIPEKTYS-SSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGL 308 (476)
Q Consensus 231 ~~~~~~~~~~~~~~vGp~~~~-~~~~~~~~~~~-~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al 308 (476)
++++++ .++++++|||++.. ......+.... ....|+.+.++.+||+.+.++++|||||||....+.+++..++.++
T Consensus 242 ~~~~~~-~~~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l 320 (482)
T 2pq6_A 242 INALSS-TIPSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPEQLLEFAWGL 320 (482)
T ss_dssp HHHHHT-TCTTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCCCHHHHHHHHHHH
T ss_pred HHHHHH-hCCcEEEEcCCcccccccccccccccccccccccchHHHHHHhcCCCCceEEEecCCcccCCHHHHHHHHHHH
Confidence 999999 77999999999863 11100000000 0022344557899999877899999999999888888899999999
Q ss_pred hhCCCcEEEEEcCCCCCCCCCCCCCchHHHHHhcCCceeeeccCHHHHhCcCCCCccccccChhHHHHHHHhCCceeccc
Q 011848 309 VHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWP 388 (476)
Q Consensus 309 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~vp~~~ll~~~~~~~~I~HgG~gs~~eal~~GvP~l~~P 388 (476)
++.+++|+|+++.+... +....+++++.++.++|+++++|+||.++|+|+++++||||||+||++||+++|||+|++|
T Consensus 321 ~~~~~~~l~~~~~~~~~--~~~~~l~~~~~~~~~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~Eal~~GvP~i~~P 398 (482)
T 2pq6_A 321 ANCKKSFLWIIRPDLVI--GGSVIFSSEFTNEIADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWP 398 (482)
T ss_dssp HHTTCEEEEECCGGGST--TTGGGSCHHHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECC
T ss_pred HhcCCcEEEEEcCCccc--cccccCcHhHHHhcCCCEEEEeecCHHHHhcCCCCCEEEecCCcchHHHHHHcCCCEEecC
Confidence 99999999999743211 1112378888888899999999999999999999999999999999999999999999999
Q ss_pred cccchhhhhHhhhcceeeeEEeccccCHHHHHHHHHHHHhH-hHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 011848 389 SFADQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMVE-RKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIK 467 (476)
Q Consensus 389 ~~~DQ~~na~r~~e~~G~g~~~~~~~~~~~l~~ai~~~l~~-~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~i~~l~ 467 (476)
++.||+.||+++++++|+|+.+++.++.++|.++|+++|+| ++.+||+||+++++++++++.+|||+.+++++||+++.
T Consensus 399 ~~~dQ~~na~~~~~~~G~g~~l~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~~ 478 (482)
T 2pq6_A 399 FFADQPTDCRFICNEWEIGMEIDTNVKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLNKVIKDVL 478 (482)
T ss_dssp CSTTHHHHHHHHHHTSCCEEECCSSCCHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHTT
T ss_pred cccchHHHHHHHHHHhCEEEEECCCCCHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHH
Confidence 99999999999954689999998779999999999999986 12279999999999999999999999999999999874
No 3
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=2.5e-61 Score=487.53 Aligned_cols=445 Identities=29% Similarity=0.460 Sum_probs=326.6
Q ss_pred CCCCCccEEEEEcCCCccCHHHHHHHHHHHHhC-CCEEEEEeCccc--hhhHhhcccccccccccCCCeeEEEcCCCCCC
Q 011848 1 MEKQDHVHVAILPLPAVGHVNSMLNLAELLGHA-GIKITFLNTEHY--YDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPR 77 (476)
Q Consensus 1 m~~~~~~~il~~~~~~~GH~~p~l~La~~L~~r-GH~Vt~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (476)
|+..+++||+++|+|++||++|++.||++|++| ||+|||++++.+ ...+..... .. .++++|+.+++...+
T Consensus 1 M~~~~~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~~---~~---~~~i~~~~l~~~~~~ 74 (480)
T 2vch_A 1 MEESKTPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLD---SL---PSSISSVFLPPVDLT 74 (480)
T ss_dssp -----CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC----C---CTTEEEEECCCCCCT
T ss_pred CCCCCCcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhcc---cc---CCCceEEEcCCCCCC
Confidence 776677899999999999999999999999998 999999998763 333332100 00 136999999864322
Q ss_pred CCCCCCCChHHHHHHHHhhCcHHHHHHHHcC--CCCc-eEEEecCCcccHHHHHHHhCCceEEEecchhhHHHHHhhhhh
Q 011848 78 DHPRTPDKFPELVDSLNCATPPLLKEMVSDS--KSPV-NCIITDGYMSRAIDAAREVGVSIIYFRTISACAFWSFHCIPD 154 (476)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~--~~~~-D~Ii~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~ 154 (476)
+. .........+......+.+.++++++++ +.++ |+||+|.++.|+..+|+++|||++.++++++..+..+.+++.
T Consensus 75 ~~-~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~ 153 (480)
T 2vch_A 75 DL-SSSTRIESRISLTVTRSNPELRKVFDSFVEGGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPK 153 (480)
T ss_dssp TS-CTTCCHHHHHHHHHHTTHHHHHHHHHHHHHTTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHH
T ss_pred CC-CCchhHHHHHHHHHHhhhHHHHHHHHHhccCCCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHH
Confidence 11 1122333333344555677888888774 2478 999999999999999999999999999999887766665553
Q ss_pred hhhcCCCCCCCCcccCccccccCCCCCCCCCCCCCCcccCCCCCChHHHHHHHHhhhhccCCEEEEcCccccchHHHHHH
Q 011848 155 IIDAGELPIKGTEDMDRLITTVPGMEGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQI 234 (476)
Q Consensus 155 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~ 234 (476)
.......+... +. ....+|++.. +...+++..+.. +.......+.+......+++.+++|++.+||++....+
T Consensus 154 ~~~~~~~~~~~---~~-~~~~~Pg~~p-~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~~l 226 (480)
T 2vch_A 154 LDETVSCEFRE---LT-EPLMLPGCVP-VAGKDFLDPAQD--RKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKAL 226 (480)
T ss_dssp HHHHCCSCGGG---CS-SCBCCTTCCC-BCGGGSCGGGSC--TTSHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHH
T ss_pred HHhcCCCcccc---cC-CcccCCCCCC-CChHHCchhhhc--CCchHHHHHHHHHHhcccCCEEEEcCHHHHhHHHHHHH
Confidence 32211111110 00 0112344443 444444443321 11234444444455556778899999999999888877
Q ss_pred Hhc--CCCCeeeeccccCcCccCCCccccCCCCcccccchhhhhhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhCC
Q 011848 235 RNH--SCPNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSK 312 (476)
Q Consensus 235 ~~~--~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~ 312 (476)
++. .++++++|||++...... ..+..+.++.+||+.++++++|||||||....+.+++..++.+++.++
T Consensus 227 ~~~~~~~~~v~~vGpl~~~~~~~---------~~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~ 297 (480)
T 2vch_A 227 QEPGLDKPPVYPVGPLVNIGKQE---------AKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSE 297 (480)
T ss_dssp HSCCTTCCCEEECCCCCCCSCSC---------C-----CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTT
T ss_pred HhcccCCCcEEEEeccccccccc---------cCccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcC
Confidence 630 257899999998643210 001345678999998778999999999999888899999999999999
Q ss_pred CcEEEEEcCCCCCC----------CCCCCCCchHHHHHhcCCceeee-ccCHHHHhCcCCCCccccccChhHHHHHHHhC
Q 011848 313 KSFLWVIRPDLISG----------KDGENQIPEELLEATKERGCIAG-WVPQEEVLAHSAVGGFLTHCGWNSTLESIVAG 381 (476)
Q Consensus 313 ~~~i~~~~~~~~~~----------~~~~~~~~~~~~~~~~~nv~~~~-~vp~~~ll~~~~~~~~I~HgG~gs~~eal~~G 381 (476)
++|||+++.....+ ......+|+++.++..++.+++. |+||.+||+|+++++||||||+||++||+++|
T Consensus 298 ~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~G 377 (480)
T 2vch_A 298 QRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSG 377 (480)
T ss_dssp CEEEEEECCCCSSTTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHT
T ss_pred CcEEEEECCccccccccccccccccchhhhcCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcC
Confidence 99999997542110 00012477777777666666665 99999999999999999999999999999999
Q ss_pred CceeccccccchhhhhHhhhcceeeeEEec-c---ccCHHHHHHHHHHHHh-HhHHHHHHHHHHHHHHHHHHHhcCCChH
Q 011848 382 MPMICWPSFADQQINSRFVGEVWKLGLDIK-D---LCDRNIVEKAVNDLMV-ERKEEFMESADRMANLAKKSVNKGGSSY 456 (476)
Q Consensus 382 vP~l~~P~~~DQ~~na~r~~e~~G~g~~~~-~---~~~~~~l~~ai~~~l~-~~~~~~~~~a~~l~~~~~~~~~~~g~~~ 456 (476)
||||++|+++||+.||+++++++|+|+.++ . .+++++|.++|+++|+ +++++||+||+++++++++++.+||++.
T Consensus 378 vP~i~~P~~~DQ~~na~~l~~~~G~g~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gGss~ 457 (480)
T 2vch_A 378 IPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTST 457 (480)
T ss_dssp CCEEECCCSTTHHHHHHHHHHTTCCEECCCCCTTSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTSTTSHHH
T ss_pred CCEEeccccccchHHHHHHHHHhCeEEEeecccCCccCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhcCCCHH
Confidence 999999999999999999745799999997 4 6999999999999998 1128999999999999999888899999
Q ss_pred HHHHHHHHHHHH
Q 011848 457 CNLDRLVNDIKM 468 (476)
Q Consensus 457 ~~~~~~i~~l~~ 468 (476)
+++++||+.+..
T Consensus 458 ~~~~~~v~~~~~ 469 (480)
T 2vch_A 458 KALSLVALKWKA 469 (480)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999999876
No 4
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=5e-62 Score=489.44 Aligned_cols=442 Identities=27% Similarity=0.495 Sum_probs=325.8
Q ss_pred CCC-CCccEEEEEcCCCccCHHHHHHHHHHHHhCCCE--EEEEeCccchhhHhhcccccccccccCCCeeEEEcCCCCCC
Q 011848 1 MEK-QDHVHVAILPLPAVGHVNSMLNLAELLGHAGIK--ITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPR 77 (476)
Q Consensus 1 m~~-~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~--Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (476)
|+. ++++||+++|+|++||++|++.||+.|++|||+ ||+++++.+...+...... .. .++++|+.++++++.
T Consensus 1 m~~~~~~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~~--~~---~~~i~~~~i~~glp~ 75 (456)
T 2c1x_A 1 MSQTTTNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMH--TM---QCNIKSYDISDGVPE 75 (456)
T ss_dssp ------CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC------------CTTEEEEECCCCCCT
T ss_pred CCCCCCCCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhccccc--cC---CCceEEEeCCCCCCC
Confidence 443 356799999999999999999999999999765 5888886554444332110 00 236999999987766
Q ss_pred CCCCCCCChHHHHHHHHhhCcHHHHHHHHcC----CCCceEEEecCCcccHHHHHHHhCCceEEEecchhhHHHHHhhhh
Q 011848 78 DHPRTPDKFPELVDSLNCATPPLLKEMVSDS----KSPVNCIITDGYMSRAIDAAREVGVSIIYFRTISACAFWSFHCIP 153 (476)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~----~~~~D~Ii~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~ 153 (476)
... ........+..+...+...++++++++ +.+||+||+|.++.|+..+|+++|||+|.++++++..+....+.+
T Consensus 76 ~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~ 154 (456)
T 2c1x_A 76 GYV-FAGRPQEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYID 154 (456)
T ss_dssp TCC-CCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHH
T ss_pred ccc-ccCChHHHHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhH
Confidence 431 111222333333333334444455432 259999999999999999999999999999999887766554433
Q ss_pred hhhhc-CCCCCCCCcccCccccccCCCCCCCCCCCCCCcccCCCCCChHHHHHHHHhhhhccCCEEEEcCccccchHHHH
Q 011848 154 DIIDA-GELPIKGTEDMDRLITTVPGMEGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILS 232 (476)
Q Consensus 154 ~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~ 232 (476)
..... +..+.. . ........+|++.. ++..+++..+..............+......+++.+++|++++||++.++
T Consensus 155 ~~~~~~~~~~~~-~-~~~~~~~~~pg~~~-~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~ 231 (456)
T 2c1x_A 155 EIREKIGVSGIQ-G-REDELLNFIPGMSK-VRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTN 231 (456)
T ss_dssp HHHHHHCSSCCT-T-CTTCBCTTSTTCTT-CBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHH
T ss_pred HHHhccCCcccc-c-ccccccccCCCCCc-ccHHhCchhhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHHHHH
Confidence 22111 221110 0 11112334566665 56666665333222222333333333344567899999999999999999
Q ss_pred HHHhcCCCCeeeeccccCcCccCCCccccCCCCcccccchhhhhhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhCC
Q 011848 233 QIRNHSCPNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSK 312 (476)
Q Consensus 233 ~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~ 312 (476)
.+++ ..+++++|||+....... . ++.+.++.+||+.+.++++|||||||......+++..++.+++..+
T Consensus 232 ~~~~-~~~~~~~vGpl~~~~~~~---------~-~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~ 300 (456)
T 2c1x_A 232 DLKS-KLKTYLNIGPFNLITPPP---------V-VPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASR 300 (456)
T ss_dssp HHHH-HSSCEEECCCHHHHC-------------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHT
T ss_pred HHHh-cCCCEEEecCcccCcccc---------c-ccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhcC
Confidence 9998 788999999998643211 0 1234568899998778999999999999888888999999999999
Q ss_pred CcEEEEEcCCCCCCCCCCCCCchHHHHHhcCCceeeeccCHHHHhCcCCCCccccccChhHHHHHHHhCCceeccccccc
Q 011848 313 KSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFAD 392 (476)
Q Consensus 313 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~vp~~~ll~~~~~~~~I~HgG~gs~~eal~~GvP~l~~P~~~D 392 (476)
++|+|+++.+. ...+++++.++.++|+++++|+||.++|+|+++++||||||+||++||+++|||+|++|++.|
T Consensus 301 ~~~lw~~~~~~------~~~l~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~~d 374 (456)
T 2c1x_A 301 VPFIWSLRDKA------RVHLPEGFLEKTRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGD 374 (456)
T ss_dssp CCEEEECCGGG------GGGSCTTHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTT
T ss_pred CeEEEEECCcc------hhhCCHHHHhhcCCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecCChhh
Confidence 99999997431 124778887778899999999999999999998999999999999999999999999999999
Q ss_pred hhhhhHhhhcceeeeEEec-cccCHHHHHHHHHHHHhH-hHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHH
Q 011848 393 QQINSRFVGEVWKLGLDIK-DLCDRNIVEKAVNDLMVE-RKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIKM 468 (476)
Q Consensus 393 Q~~na~r~~e~~G~g~~~~-~~~~~~~l~~ai~~~l~~-~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~i~~l~~ 468 (476)
|+.||+++++.+|+|+.++ +.++.++|.++|+++|+| ++++||+||+++++.+++++.+||||.+++++||+.+..
T Consensus 375 Q~~Na~~l~~~~g~g~~l~~~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~~~~ 452 (456)
T 2c1x_A 375 QRLNGRMVEDVLEIGVRIEGGVFTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLVSK 452 (456)
T ss_dssp HHHHHHHHHHTSCCEEECGGGSCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHhCeEEEecCCCcCHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHHh
Confidence 9999999964339999998 689999999999999985 234899999999999999999999999999999998853
No 5
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=1.4e-58 Score=465.77 Aligned_cols=433 Identities=28% Similarity=0.495 Sum_probs=326.6
Q ss_pred CccEEEEEcCCCccCHHHHHHHHHHHHhC--CCEEEEEeCccch-----hhHhhcccccccccccCCCeeEEEcCCCCCC
Q 011848 5 DHVHVAILPLPAVGHVNSMLNLAELLGHA--GIKITFLNTEHYY-----DRVIRHSSDAFSRYMQIPGFQFKTLTDGLPR 77 (476)
Q Consensus 5 ~~~~il~~~~~~~GH~~p~l~La~~L~~r--GH~Vt~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (476)
+++||+++|+|++||++|++.||+.|++| ||+|||++++.+. ..+..... . .++++|+.++++..+
T Consensus 8 ~~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~~----~---~~~i~~~~lp~~~~~ 80 (463)
T 2acv_A 8 KNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLA----S---QPQIQLIDLPEVEPP 80 (463)
T ss_dssp HCEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHHC----S---CTTEEEEECCCCCCC
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhccc----C---CCCceEEECCCCCCC
Confidence 35799999999999999999999999999 9999999988753 12221000 0 346999999975211
Q ss_pred CCCCCCCChHHHHHHHHhhCcHHHHHHHHcC-CCCceEEEecCCcccHHHHHHHhCCceEEEecchhhHHHHHhhhhhhh
Q 011848 78 DHPRTPDKFPELVDSLNCATPPLLKEMVSDS-KSPVNCIITDGYMSRAIDAAREVGVSIIYFRTISACAFWSFHCIPDII 156 (476)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~-~~~~D~Ii~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 156 (476)
+. +........+......+.+.++++++++ +.+||+||+|.++.|+..+|+++|||++.++++++..+..+.+++...
T Consensus 81 ~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 159 (463)
T 2acv_A 81 PQ-ELLKSPEFYILTFLESLIPHVKATIKTILSNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQ 159 (463)
T ss_dssp CG-GGGGSHHHHHHHHHHHTHHHHHHHHHHHCCTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSC
T ss_pred cc-cccCCccHHHHHHHHhhhHHHHHHHHhccCCCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhhc
Confidence 11 0011111113344455777888888873 249999999999999999999999999999999888777665554331
Q ss_pred hcCCCCCCCCcccCccccccCCC-CCCCCCCCCCCcccCCCCCChHHHHHHHHhhhhccCCEEEEcCccccchHHHHHHH
Q 011848 157 DAGELPIKGTEDMDRLITTVPGM-EGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIR 235 (476)
Q Consensus 157 ~~~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~ 235 (476)
.. .+.... +.......+|++ .. +...+++..+... ......+.+......+++.+++|++.+||++..++++
T Consensus 160 ~~--~~~~~~-~~~~~~~~~pg~~~~-~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~~~l~ 232 (463)
T 2acv_A 160 IE--EVFDDS-DRDHQLLNIPGISNQ-VPSNVLPDACFNK---DGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALY 232 (463)
T ss_dssp TT--CCCCCS-SGGGCEECCTTCSSC-EEGGGSCHHHHCT---TTHHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHHHH
T ss_pred cc--CCCCCc-cccCceeECCCCCCC-CChHHCchhhcCC---chHHHHHHHHHHhcccCCEEEECCHHHHhHHHHHHHH
Confidence 00 111110 000002345565 33 4444444333221 1244444455555677889999999999999888877
Q ss_pred hcC--CCCeeeeccccCcCccCCCccccCCCCcccccchhhhhhhcCCCCceEEEEecccc-cCCHHHHHHHHHHHhhCC
Q 011848 236 NHS--CPNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIA-VMSRDQLIEFYYGLVHSK 312 (476)
Q Consensus 236 ~~~--~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~-~~~~~~~~~~~~al~~~~ 312 (476)
+.. .+++++|||+.......... ..|..+.++.+||+.++++++|||||||.. ..+.+++..++.+++..+
T Consensus 233 ~~~~p~~~v~~vGpl~~~~~~~~~~------~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~ 306 (463)
T 2acv_A 233 DHDEKIPPIYAVGPLLDLKGQPNPK------LDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSG 306 (463)
T ss_dssp HHCTTSCCEEECCCCCCSSCCCBTT------BCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHT
T ss_pred hccccCCcEEEeCCCcccccccccc------cccccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhCC
Confidence 512 57899999998643200000 002344678999998778999999999999 788888999999999999
Q ss_pred CcEEEEEcCCCCCCCCCCCCCchHHHHHh--cCCceeeeccCHHHHhCcCCCCccccccChhHHHHHHHhCCceeccccc
Q 011848 313 KSFLWVIRPDLISGKDGENQIPEELLEAT--KERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSF 390 (476)
Q Consensus 313 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~--~~nv~~~~~vp~~~ll~~~~~~~~I~HgG~gs~~eal~~GvP~l~~P~~ 390 (476)
++|||+++.+ ...+++++.++. ++|+++++|+||.++|+|+++++||||||+||++||+++|||+|++|++
T Consensus 307 ~~~l~~~~~~-------~~~l~~~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~ 379 (463)
T 2acv_A 307 VRFLWSNSAE-------KKVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIY 379 (463)
T ss_dssp CEEEEECCCC-------GGGSCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCS
T ss_pred CcEEEEECCC-------cccCChhHHHhhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeeccch
Confidence 9999999632 124677777766 8899999999999999999999999999999999999999999999999
Q ss_pred cchhhhhHhhhcceeeeEEe-c----c--ccCHHHHHHHHHHHHh-HhHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHH
Q 011848 391 ADQQINSRFVGEVWKLGLDI-K----D--LCDRNIVEKAVNDLMV-ERKEEFMESADRMANLAKKSVNKGGSSYCNLDRL 462 (476)
Q Consensus 391 ~DQ~~na~r~~e~~G~g~~~-~----~--~~~~~~l~~ai~~~l~-~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~ 462 (476)
.||+.||+++++++|+|+.+ . + .++.++|.++|+++|+ + ++||+||+++++++++++.+||+|.+++++|
T Consensus 380 ~dQ~~Na~~lv~~~g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~~~--~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~ 457 (463)
T 2acv_A 380 AEQQLNAFRLVKEWGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKD--SIVHKKVQEMKEMSRNAVVDGGSSLISVGKL 457 (463)
T ss_dssp TTHHHHHHHHHHTSCCEEESCSSCCTTCCCCCHHHHHHHHHHHTCTT--CTHHHHHHHHHHHHHHHTSTTSHHHHHHHHH
T ss_pred hhhHHHHHHHHHHcCeEEEEecccCCCCccccHHHHHHHHHHHHhcc--HHHHHHHHHHHHHHHHHHhcCCcHHHHHHHH
Confidence 99999999953579999999 2 3 6899999999999997 4 7899999999999999999999999999999
Q ss_pred HHHHH
Q 011848 463 VNDIK 467 (476)
Q Consensus 463 i~~l~ 467 (476)
|++++
T Consensus 458 v~~~~ 462 (463)
T 2acv_A 458 IDDIT 462 (463)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 99985
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=1.7e-45 Score=368.56 Aligned_cols=394 Identities=16% Similarity=0.189 Sum_probs=266.5
Q ss_pred CCCccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCccchhhHhhcccccccccccCCCeeEEEcCCCCCCCCCC-
Q 011848 3 KQDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPR- 81 (476)
Q Consensus 3 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 81 (476)
+|+||||+|++.|+.||++|+++||++|+++||+|+|++++.+.+.+... +++|+.+++.++.....
T Consensus 9 ~m~~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~~~------------g~~~~~~~~~~~~~~~~~ 76 (424)
T 2iya_A 9 SVTPRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKAA------------GATPVVYDSILPKESNPE 76 (424)
T ss_dssp --CCCEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH------------TCEEEECCCCSCCTTCTT
T ss_pred CcccceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHHhC------------CCEEEecCccccccccch
Confidence 36788999999999999999999999999999999999998876666554 37888887654432111
Q ss_pred --CCCChHHHHHHHHh---hCcHHHHHHHHcCCCCceEEEecCCcccHHHHHHHhCCceEEEecchhhHHHHHhhhhhhh
Q 011848 82 --TPDKFPELVDSLNC---ATPPLLKEMVSDSKSPVNCIITDGYMSRAIDAAREVGVSIIYFRTISACAFWSFHCIPDII 156 (476)
Q Consensus 82 --~~~~~~~~~~~~~~---~~~~~~~~ll~~~~~~~D~Ii~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~ 156 (476)
...+....+..+.. .....+.++++++ +||+||+|.+..++..+|+.+|||++.+++.+..... +...+...
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~-~~~~~~~~ 153 (424)
T 2iya_A 77 ESWPEDQESAMGLFLDEAVRVLPQLEDAYADD--RPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEG-FEEDVPAV 153 (424)
T ss_dssp CCCCSSHHHHHHHHHHHHHHHHHHHHHHTTTS--CCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTT-HHHHSGGG
T ss_pred hhcchhHHHHHHHHHHHHHHHHHHHHHHHhcc--CCCEEEEcCcccHHHHHHHhcCCCEEEEecccccccc-cccccccc
Confidence 12233333222222 2334445555554 9999999998889999999999999999876541111 00000000
Q ss_pred hcCCCCCCCCcccCccccccC-CCCCCCCCCCCCCcccCCCCCChHHHHHHHHh----------hhhccCCEEEEcCccc
Q 011848 157 DAGELPIKGTEDMDRLITTVP-GMEGFLRCRDLPSFCRVNDPMDPHLLLFARET----------RLSAHADGLILNTFED 225 (476)
Q Consensus 157 ~~~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~s~~~ 225 (476)
...+...... ...+ +... . ..+..... ......+...+.. .....++.++++++++
T Consensus 154 ~~~~~~~~~~-------~~~~~~~~~-~--~~~~~~~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~ 220 (424)
T 2iya_A 154 QDPTADRGEE-------AAAPAGTGD-A--EEGAEAED---GLVRFFTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRT 220 (424)
T ss_dssp SCCCC-------------------------------HH---HHHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEESSCTT
T ss_pred cccccccccc-------ccccccccc-c--hhhhccch---hHHHHHHHHHHHHHHcCCCCCHHHhccCCCcEEEEcchh
Confidence 0000000000 0000 0000 0 00000000 0000000000000 1112567899999999
Q ss_pred cchHHHHHHHhcCCCCeeeeccccCcCccCCCccccCCCCcccccchhhhhhhcCCCCceEEEEecccccCCHHHHHHHH
Q 011848 226 LEGPILSQIRNHSCPNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFY 305 (476)
Q Consensus 226 le~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~ 305 (476)
++++. +. ..+++++|||+..... ...+|++...++++|||++||......+.+..++
T Consensus 221 l~~~~----~~-~~~~~~~vGp~~~~~~------------------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~ 277 (424)
T 2iya_A 221 FQIKG----DT-VGDNYTFVGPTYGDRS------------------HQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCL 277 (424)
T ss_dssp TSTTG----GG-CCTTEEECCCCCCCCG------------------GGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHH
T ss_pred hCCCc----cC-CCCCEEEeCCCCCCcc------------------cCCCCCccCCCCCEEEEEcCCCCcchHHHHHHHH
Confidence 98862 22 4468999999764211 0124666556789999999999866678888999
Q ss_pred HHHhhCCCcEEEEEcCCCCCCCCCCCCCchHHHHHhcCCceeeeccCHHHHhCcCCCCccccccChhHHHHHHHhCCcee
Q 011848 306 YGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMI 385 (476)
Q Consensus 306 ~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~vp~~~ll~~~~~~~~I~HgG~gs~~eal~~GvP~l 385 (476)
+++++.+.+++|.++... ....+. ..++|+.+.+|+||.++|+++++ ||||||+||++||+++|+|+|
T Consensus 278 ~al~~~~~~~~~~~g~~~-----~~~~~~-----~~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i 345 (424)
T 2iya_A 278 SAVDGLDWHVVLSVGRFV-----DPADLG-----EVPPNVEVHQWVPQLDILTKASA--FITHAGMGSTMEALSNAVPMV 345 (424)
T ss_dssp HHHTTCSSEEEEECCTTS-----CGGGGC-----SCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEE
T ss_pred HHHhcCCcEEEEEECCcC-----ChHHhc-----cCCCCeEEecCCCHHHHHhhCCE--EEECCchhHHHHHHHcCCCEE
Confidence 999988899999886421 001111 14679999999999999999997 999999999999999999999
Q ss_pred ccccccchhhhhHhhhcceeeeEEec-cccCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHH
Q 011848 386 CWPSFADQQINSRFVGEVWKLGLDIK-DLCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVN 464 (476)
Q Consensus 386 ~~P~~~DQ~~na~r~~e~~G~g~~~~-~~~~~~~l~~ai~~~l~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~i~ 464 (476)
++|...||+.||.+++ +.|+|+.++ +.++.++|.++|+++|+| ++++++++++++++++. +| ...+.+.|+
T Consensus 346 ~~p~~~dQ~~na~~l~-~~g~g~~~~~~~~~~~~l~~~i~~ll~~--~~~~~~~~~~~~~~~~~---~~--~~~~~~~i~ 417 (424)
T 2iya_A 346 AVPQIAEQTMNAERIV-ELGLGRHIPRDQVTAEKLREAVLAVASD--PGVAERLAAVRQEIREA---GG--ARAAADILE 417 (424)
T ss_dssp ECCCSHHHHHHHHHHH-HTTSEEECCGGGCCHHHHHHHHHHHHHC--HHHHHHHHHHHHHHHTS---CH--HHHHHHHHH
T ss_pred EecCccchHHHHHHHH-HCCCEEEcCcCCCCHHHHHHHHHHHHcC--HHHHHHHHHHHHHHHhc---Cc--HHHHHHHHH
Confidence 9999999999999995 789999998 689999999999999998 89999999999999874 33 344456666
Q ss_pred HHH
Q 011848 465 DIK 467 (476)
Q Consensus 465 ~l~ 467 (476)
++.
T Consensus 418 ~~~ 420 (424)
T 2iya_A 418 GIL 420 (424)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=9.3e-45 Score=360.41 Aligned_cols=357 Identities=13% Similarity=0.165 Sum_probs=231.2
Q ss_pred CccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCccchhhHhhcccccccccccCCCeeEEEcCCCCCC------C
Q 011848 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPR------D 78 (476)
Q Consensus 5 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~ 78 (476)
+.|||+|++.|++||++|+++||++|++|||+|+|++++.+.. +.+. ++.+..+.+.... .
T Consensus 21 ~~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~-~~~~------------g~~~~~~~~~~~~~~~~~~~ 87 (400)
T 4amg_A 21 QSMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRA-VAEA------------GLCAVDVSPGVNYAKLFVPD 87 (400)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHH-HHTT------------TCEEEESSTTCCSHHHHSCC
T ss_pred CCCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhh-HHhc------------CCeeEecCCchhHhhhcccc
Confidence 4579999999999999999999999999999999999987544 4333 2555554422111 0
Q ss_pred -----C-CCCCC-Ch---HHHHHHHHhhCcHHHHHHHHcCCCCceEEEecCCcccHHHHHHHhCCceEEEecchhhHHHH
Q 011848 79 -----H-PRTPD-KF---PELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMSRAIDAAREVGVSIIYFRTISACAFWS 148 (476)
Q Consensus 79 -----~-~~~~~-~~---~~~~~~~~~~~~~~~~~ll~~~~~~~D~Ii~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~ 148 (476)
. ..... .. ...+..........+.++++++ +||+||+|.++.++..+|+.+|||++.+...+......
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~~~~~ 165 (400)
T 4amg_A 88 DTDVTDPMHSEGLGEGFFAEMFARVSAVAVDGALRTARSW--RPDLVVHTPTQGAGPLTAAALQLPCVELPLGPADSEPG 165 (400)
T ss_dssp C------------CHHHHHHHHHHHHHHHHHHHHHHHHHH--CCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTTCCHH
T ss_pred ccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCEEEECcchHHHHHHHHHcCCCceeecccccccccc
Confidence 0 00000 11 1112222223344556666776 99999999999999999999999999986654332221
Q ss_pred HhhhhhhhhcCCCCCCCCcccCccccccCCCCCCCCCCCCCCcccCCCCCChHHHHHHHHhhhhccCCEEEEcCccccch
Q 011848 149 FHCIPDIIDAGELPIKGTEDMDRLITTVPGMEGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEG 228 (476)
Q Consensus 149 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~ 228 (476)
....... . +..... ..++. .. ...+..+......
T Consensus 166 ~~~~~~~---~---------l~~~~~-~~~~~----~~--------------------------~~~~~~~~~~~~~--- 199 (400)
T 4amg_A 166 LGALIRR---A---------MSKDYE-RHGVT----GE--------------------------PTGSVRLTTTPPS--- 199 (400)
T ss_dssp HHHHHHH---H---------THHHHH-HTTCC----CC--------------------------CSCEEEEECCCHH---
T ss_pred hhhHHHH---H---------HHHHHH-HhCCC----cc--------------------------cccchhhcccCch---
Confidence 1110000 0 000000 00000 00 0001111111100
Q ss_pred HHHHHHHh--cCCCCeeeeccccCcCccCCCccccCCCCcccccchhhhhhhcCCCCceEEEEecccccCC--HHHHHHH
Q 011848 229 PILSQIRN--HSCPNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMS--RDQLIEF 304 (476)
Q Consensus 229 ~~~~~~~~--~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~--~~~~~~~ 304 (476)
.....+ ...+....+.+.... ....+.+|++...++++|||||||..... ...+..+
T Consensus 200 --~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~ 260 (400)
T 4amg_A 200 --VEALLPEDRRSPGAWPMRYVPYN-----------------GGAVLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPL 260 (400)
T ss_dssp --HHHTSCGGGCCTTCEECCCCCCC-----------------CCEECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHH
T ss_pred --hhccCcccccCCcccCccccccc-----------------ccccCcccccccCCCcEEEEeCCcccccCccHHHHHHH
Confidence 000000 011222222222211 11223458887888999999999987443 3567888
Q ss_pred HHHHhhCCCcEEEEEcCCCCCCCCCCCCCchHHHHHhcCCceeeeccCHHHHhCcCCCCccccccChhHHHHHHHhCCce
Q 011848 305 YYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPM 384 (476)
Q Consensus 305 ~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~vp~~~ll~~~~~~~~I~HgG~gs~~eal~~GvP~ 384 (476)
+.++.+.+.+++|..+..... .... .++|+.+.+|+||.++|+++++ ||||||+||++||+++|||+
T Consensus 261 ~~~l~~~~~~~v~~~~~~~~~------~~~~-----~~~~v~~~~~~p~~~lL~~~~~--~v~h~G~~s~~Eal~~GvP~ 327 (400)
T 4amg_A 261 FSEVADVDAEFVLTLGGGDLA------LLGE-----LPANVRVVEWIPLGALLETCDA--IIHHGGSGTLLTALAAGVPQ 327 (400)
T ss_dssp HHHGGGSSSEEEEECCTTCCC------CCCC-----CCTTEEEECCCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCE
T ss_pred HHHhhccCceEEEEecCcccc------cccc-----CCCCEEEEeecCHHHHhhhhhh--eeccCCccHHHHHHHhCCCE
Confidence 999999999999998643211 1221 5689999999999999999997 99999999999999999999
Q ss_pred eccccccchhhhhHhhhcceeeeEEec-cccCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHH
Q 011848 385 ICWPSFADQQINSRFVGEVWKLGLDIK-DLCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLV 463 (476)
Q Consensus 385 l~~P~~~DQ~~na~r~~e~~G~g~~~~-~~~~~~~l~~ai~~~l~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~i 463 (476)
|++|++.||+.||++++ ++|+|+.++ .++++ ++|+++|+| ++||++|+++++++++. .+ ...+.+.|
T Consensus 328 v~~P~~~dQ~~na~~v~-~~G~g~~l~~~~~~~----~al~~lL~d--~~~r~~a~~l~~~~~~~---~~--~~~~a~~l 395 (400)
T 4amg_A 328 CVIPHGSYQDTNRDVLT-GLGIGFDAEAGSLGA----EQCRRLLDD--AGLREAALRVRQEMSEM---PP--PAETAAXL 395 (400)
T ss_dssp EECCC---CHHHHHHHH-HHTSEEECCTTTCSH----HHHHHHHHC--HHHHHHHHHHHHHHHTS---CC--HHHHHHHH
T ss_pred EEecCcccHHHHHHHHH-HCCCEEEcCCCCchH----HHHHHHHcC--HHHHHHHHHHHHHHHcC---CC--HHHHHHHH
Confidence 99999999999999995 789999998 56665 467789999 99999999999999985 43 45567777
Q ss_pred HHH
Q 011848 464 NDI 466 (476)
Q Consensus 464 ~~l 466 (476)
|+|
T Consensus 396 e~l 398 (400)
T 4amg_A 396 VAL 398 (400)
T ss_dssp HHH
T ss_pred HHh
Confidence 876
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=8.6e-43 Score=347.80 Aligned_cols=386 Identities=13% Similarity=0.119 Sum_probs=256.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCccchhhHhhcccccccccccCCCeeEEEcCCCCCCCCCCCCCCh
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRTPDKF 86 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (476)
|||+|++.|+.||++|+++||++|++|||+|+|++++.+.+.+... +++++.++..............
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~------------g~~~~~i~~~~~~~~~~~~~~~ 68 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAEV------------GVPHVPVGPSARAPIQRAKPLT 68 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHT------------TCCEEECCC-------CCSCCC
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHHc------------CCeeeeCCCCHHHHhhcccccc
Confidence 5999999999999999999999999999999999998755555443 4778877754321100001111
Q ss_pred HHHHHHHHh-hCcHHHHHHHHcCCCCceEEEecC-Cccc--HHHHHHHhCCceEEEecchhhHHHHHhhhhhhhhcCCCC
Q 011848 87 PELVDSLNC-ATPPLLKEMVSDSKSPVNCIITDG-YMSR--AIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGELP 162 (476)
Q Consensus 87 ~~~~~~~~~-~~~~~~~~ll~~~~~~~D~Ii~D~-~~~~--~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p 162 (476)
...+..+.. .....++++.+. ..+||+||+|. +..+ +..+|+.+|||++.+.+.+..... .+.|
T Consensus 69 ~~~~~~~~~~~~~~~~~~l~~~-~~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~-----------~~~p 136 (415)
T 1iir_A 69 AEDVRRFTTEAIATQFDEIPAA-AEGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVPS-----------PYYP 136 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-TTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSCC-----------SSSC
T ss_pred hHHHHHHHHHHHHHHHHHHHHH-hcCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCCC-----------cccC
Confidence 112222221 112334444431 24999999998 6778 899999999999999877533211 1111
Q ss_pred CCCCcccCccccccCC-CCCCCCCCCCCCcccCCCCCChHHHHHHHH---------hhhhccCCEEEEcCccccch-HHH
Q 011848 163 IKGTEDMDRLITTVPG-MEGFLRCRDLPSFCRVNDPMDPHLLLFARE---------TRLSAHADGLILNTFEDLEG-PIL 231 (476)
Q Consensus 163 ~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~l~~s~~~le~-~~~ 231 (476)
.... . ....++ ..+.+........... ......+..... .+..... .+++|+++.|++ +
T Consensus 137 ~~~~-~----~~~~~~~~~n~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~~-- 206 (415)
T 1iir_A 137 PPPL-G----EPSTQDTIDIPAQWERNNQSAYQ--RYGGLLNSHRDAIGLPPVEDIFTFGYTD-HPWVAADPVLAPLQ-- 206 (415)
T ss_dssp CCC--------------CHHHHHHHHHHHHHHH--HHHHHHHHHHHHTTCCCCCCHHHHHHCS-SCEECSCTTTSCCC--
T ss_pred CccC-C----ccccchHHHHHHHHHHHHHHHHH--HhHHHHHHHHHHcCCCCCCccccccCCC-CEEEeeChhhcCCC--
Confidence 1100 0 000000 0000000000000000 000000000000 0011233 689999999987 5
Q ss_pred HHHHhcCCCCeeeeccccCcCccCCCccccCCCCcccccchhhhhhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhC
Q 011848 232 SQIRNHSCPNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHS 311 (476)
Q Consensus 232 ~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~ 311 (476)
++ .+ ++++|||+...... +.+.++.+|++. ++++|||++||.. ......+.+++++++.
T Consensus 207 ---~~-~~-~~~~vG~~~~~~~~-------------~~~~~~~~~l~~--~~~~v~v~~Gs~~-~~~~~~~~~~~al~~~ 265 (415)
T 1iir_A 207 ---PT-DL-DAVQTGAWILPDER-------------PLSPELAAFLDA--GPPPVYLGFGSLG-APADAVRVAIDAIRAH 265 (415)
T ss_dssp ---CC-SS-CCEECCCCCCCCCC-------------CCCHHHHHHHHT--SSCCEEEECC----CCHHHHHHHHHHHHHT
T ss_pred ---cc-cC-CeEeeCCCccCccc-------------CCCHHHHHHHhh--CCCeEEEeCCCCC-CcHHHHHHHHHHHHHC
Confidence 44 55 89999999864221 234568899985 4689999999997 5677788899999999
Q ss_pred CCcEEEEEcCCCCCCCCCCCCCchHHHHHhcCCceeeeccCHHHHhCcCCCCccccccChhHHHHHHHhCCceecccccc
Q 011848 312 KKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFA 391 (476)
Q Consensus 312 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~vp~~~ll~~~~~~~~I~HgG~gs~~eal~~GvP~l~~P~~~ 391 (476)
+.+++|+++.... ... ..++|+.+.+|+||.++|+.+++ ||||||+||++||+++|+|+|++|...
T Consensus 266 ~~~~v~~~g~~~~-------~~~-----~~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~ 331 (415)
T 1iir_A 266 GRRVILSRGWADL-------VLP-----DDGADCFAIGEVNHQVLFGRVAA--VIHHGGAGTTHVAARAGAPQILLPQMA 331 (415)
T ss_dssp TCCEEECTTCTTC-------CCS-----SCGGGEEECSSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCST
T ss_pred CCeEEEEeCCCcc-------ccc-----CCCCCEEEeCcCChHHHHhhCCE--EEeCCChhHHHHHHHcCCCEEECCCCC
Confidence 9999999864311 111 14578999999999999988887 999999999999999999999999999
Q ss_pred chhhhhHhhhcceeeeEEec-cccCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHhc
Q 011848 392 DQQINSRFVGEVWKLGLDIK-DLCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIKMMS 470 (476)
Q Consensus 392 DQ~~na~r~~e~~G~g~~~~-~~~~~~~l~~ai~~~l~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~i~~l~~~~ 470 (476)
||..||.++ ++.|+|+.++ ++++.++|.++|+++ +| ++|++++++++++++.. +| ...+.+.|+++..++
T Consensus 332 dQ~~na~~l-~~~g~g~~~~~~~~~~~~l~~~i~~l-~~--~~~~~~~~~~~~~~~~~---~~--~~~~~~~i~~~~~~~ 402 (415)
T 1iir_A 332 DQPYYAGRV-AELGVGVAHDGPIPTFDSLSAALATA-LT--PETHARATAVAGTIRTD---GA--AVAARLLLDAVSREK 402 (415)
T ss_dssp THHHHHHHH-HHHTSEEECSSSSCCHHHHHHHHHHH-TS--HHHHHHHHHHHHHSCSC---HH--HHHHHHHHHHHHTC-
T ss_pred ccHHHHHHH-HHCCCcccCCcCCCCHHHHHHHHHHH-cC--HHHHHHHHHHHHHHhhc---Ch--HHHHHHHHHHHHhcc
Confidence 999999999 5789999998 689999999999999 98 89999999999988652 22 455677777766543
No 9
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=1.1e-41 Score=340.07 Aligned_cols=385 Identities=14% Similarity=0.112 Sum_probs=256.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCccchhhHhhcccccccccccCCCeeEEEcCCCCCCCCCC-CCCC
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPR-TPDK 85 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 85 (476)
|||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+... +++++.++......... ....
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~------------g~~~~~~~~~~~~~~~~~~~~~ 68 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAEV------------GVPHVPVGLPQHMMLQEGMPPP 68 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH------------TCCEEECSCCGGGCCCTTSCCC
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHc------------CCeeeecCCCHHHHHhhccccc
Confidence 5999999999999999999999999999999999998765555543 37777777532111000 0111
Q ss_pred hHHHHHHHHhhC-cHHHHHHHHcCCCCceEEEecC-Cccc--HHHHHHHhCCceEEEecchhhHHHHHhhhhhhhhcCCC
Q 011848 86 FPELVDSLNCAT-PPLLKEMVSDSKSPVNCIITDG-YMSR--AIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGEL 161 (476)
Q Consensus 86 ~~~~~~~~~~~~-~~~~~~ll~~~~~~~D~Ii~D~-~~~~--~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (476)
....+..+.... ...++.+.+. ..+||+||+|. +..+ +..+|+.+|||++.+.+.+..... .+.
T Consensus 69 ~~~~~~~~~~~~~~~~~~~l~~~-~~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~~-----------~~~ 136 (416)
T 1rrv_A 69 PPEEEQRLAAMTVEMQFDAVPGA-AEGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLAS-----------PHL 136 (416)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHH-TTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSCC-----------SSS
T ss_pred hhHHHHHHHHHHHHHHHHHHHHH-hcCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCCC-----------ccc
Confidence 111222222111 2223333321 24999999996 4556 899999999999998876532211 111
Q ss_pred CCCCCcccCccccccCC-CCCCCCCCCCCCcccCCCCCChHHHHHHHH---------hhhhccCCEEEEcCccccchHHH
Q 011848 162 PIKGTEDMDRLITTVPG-MEGFLRCRDLPSFCRVNDPMDPHLLLFARE---------TRLSAHADGLILNTFEDLEGPIL 231 (476)
Q Consensus 162 p~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~l~~s~~~le~~~~ 231 (476)
| ... .+ ...++ +.+++........... . ........... .+..... .+++|++++|+++
T Consensus 137 p-~~~-~~----~~~~~r~~n~~~~~~~~~~~~~-~-~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~-- 205 (416)
T 1rrv_A 137 P-PAY-DE----PTTPGVTDIRVLWEERAARFAD-R-YGPTLNRRRAEIGLPPVEDVFGYGHGE-RPLLAADPVLAPL-- 205 (416)
T ss_dssp C-CCB-CS----CCCTTCCCHHHHHHHHHHHHHH-H-HHHHHHHHHHHTTCCCCSCHHHHTTCS-SCEECSCTTTSCC--
T ss_pred C-CCC-CC----CCCchHHHHHHHHHHHHHHHHH-H-hHHHHHHHHHHcCCCCCCchhhhccCC-CeEEccCccccCC--
Confidence 1 000 00 00000 1110000000000000 0 00000000000 0111233 7899999999876
Q ss_pred HHHHhcCCCCeeeeccccCcCccCCCccccCCCCcccccchhhhhhhcCCCCceEEEEeccccc-CCHHHHHHHHHHHhh
Q 011848 232 SQIRNHSCPNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAV-MSRDQLIEFYYGLVH 310 (476)
Q Consensus 232 ~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~-~~~~~~~~~~~al~~ 310 (476)
++ .+ ++++|||+..+... ..+.++.+|++. ++++|||++||... .....+..+++++++
T Consensus 206 ---~~-~~-~~~~vG~~~~~~~~-------------~~~~~~~~~l~~--~~~~v~v~~Gs~~~~~~~~~~~~~~~al~~ 265 (416)
T 1rrv_A 206 ---QP-DV-DAVQTGAWLLSDER-------------PLPPELEAFLAA--GSPPVHIGFGSSSGRGIADAAKVAVEAIRA 265 (416)
T ss_dssp ---CS-SC-CCEECCCCCCCCCC-------------CCCHHHHHHHHS--SSCCEEECCTTCCSHHHHHHHHHHHHHHHH
T ss_pred ---CC-CC-CeeeECCCccCccC-------------CCCHHHHHHHhc--CCCeEEEecCCCCccChHHHHHHHHHHHHH
Confidence 44 44 89999999865221 234567889975 46899999999864 345667889999999
Q ss_pred CCCcEEEEEcCCCCCCCCCCCCCchHHHHHhcCCceeeeccCHHHHhCcCCCCccccccChhHHHHHHHhCCceeccccc
Q 011848 311 SKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSF 390 (476)
Q Consensus 311 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~vp~~~ll~~~~~~~~I~HgG~gs~~eal~~GvP~l~~P~~ 390 (476)
.+.+++|+++.... ... ..++|+.+.+|+||.++|+++++ ||||||+||++||+++|+|+|++|..
T Consensus 266 ~~~~~v~~~g~~~~-------~~~-----~~~~~v~~~~~~~~~~ll~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~ 331 (416)
T 1rrv_A 266 QGRRVILSRGWTEL-------VLP-----DDRDDCFAIDEVNFQALFRRVAA--VIHHGSAGTEHVATRAGVPQLVIPRN 331 (416)
T ss_dssp TTCCEEEECTTTTC-------CCS-----CCCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCS
T ss_pred CCCeEEEEeCCccc-------ccc-----CCCCCEEEeccCChHHHhccCCE--EEecCChhHHHHHHHcCCCEEEccCC
Confidence 99999999864311 111 14679999999999999988887 99999999999999999999999999
Q ss_pred cchhhhhHhhhcceeeeEEec-cccCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHH-HHHHH
Q 011848 391 ADQQINSRFVGEVWKLGLDIK-DLCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLV-NDIKM 468 (476)
Q Consensus 391 ~DQ~~na~r~~e~~G~g~~~~-~~~~~~~l~~ai~~~l~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~i-~~l~~ 468 (476)
.||+.||.++ ++.|+|+.++ +++++++|.++|+++ +| ++|+++++++++++++. ++. .+.+.| |.+..
T Consensus 332 ~dQ~~na~~l-~~~g~g~~~~~~~~~~~~l~~~i~~l-~~--~~~~~~~~~~~~~~~~~----~~~--~~~~~i~e~~~~ 401 (416)
T 1rrv_A 332 TDQPYFAGRV-AALGIGVAHDGPTPTFESLSAALTTV-LA--PETRARAEAVAGMVLTD----GAA--AAADLVLAAVGR 401 (416)
T ss_dssp BTHHHHHHHH-HHHTSEEECSSSCCCHHHHHHHHHHH-TS--HHHHHHHHHHTTTCCCC----HHH--HHHHHHHHHHHC
T ss_pred CCcHHHHHHH-HHCCCccCCCCCCCCHHHHHHHHHHh-hC--HHHHHHHHHHHHHHhhc----CcH--HHHHHHHHHHhc
Confidence 9999999999 5789999998 689999999999999 98 89999999999988763 333 445555 77655
Q ss_pred hc
Q 011848 469 MS 470 (476)
Q Consensus 469 ~~ 470 (476)
+.
T Consensus 402 ~~ 403 (416)
T 1rrv_A 402 EK 403 (416)
T ss_dssp --
T ss_pred cC
Confidence 43
No 10
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=2.5e-40 Score=330.23 Aligned_cols=385 Identities=13% Similarity=0.131 Sum_probs=259.9
Q ss_pred CCccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCccchhhHhhcccccccccccCCCeeEEEcCCCCCCCCCC--
Q 011848 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPR-- 81 (476)
Q Consensus 4 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 81 (476)
..||||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+... ++.+..++..++.....
T Consensus 18 ~~m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~~~------------G~~~~~~~~~~~~~~~~~~ 85 (415)
T 3rsc_A 18 RHMAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRAA------------GATVVPYQSEIIDADAAEV 85 (415)
T ss_dssp -CCCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHT------------TCEEEECCCSTTTCCHHHH
T ss_pred ccCCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHHhc------------CCEEEeccccccccccchh
Confidence 3589999999999999999999999999999999999998877776654 48888887543321100
Q ss_pred -CCCChHHH----HHHHHhhCcHHHHHHHHcCCCCceEEEec-CCcccHHHHHHHhCCceEEEecchhhHHHHHhhhhhh
Q 011848 82 -TPDKFPEL----VDSLNCATPPLLKEMVSDSKSPVNCIITD-GYMSRAIDAAREVGVSIIYFRTISACAFWSFHCIPDI 155 (476)
Q Consensus 82 -~~~~~~~~----~~~~~~~~~~~~~~ll~~~~~~~D~Ii~D-~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~ 155 (476)
........ +..........+.++++++ +||+||+| ....++..+|+.+|||++.+.+....... +...+..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~-~~~~~~~ 162 (415)
T 3rsc_A 86 FGSDDLGVRPHLMYLRENVSVLRATAEALDGD--VPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNEH-YSFSQDM 162 (415)
T ss_dssp HHSSSSCHHHHHHHHHHHHHHHHHHHHHHSSS--CCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCSS-CCHHHHH
T ss_pred hccccHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccCc-ccccccc
Confidence 00011111 1112222334556666665 99999999 78888999999999999998754321100 0000000
Q ss_pred hhcCCCCCCCCcccCccccccCCCCCCCCCCCCCCcccCCCCCChHHHHHHHHhhhhcc-CCEEEEcCccccchHHHHHH
Q 011848 156 IDAGELPIKGTEDMDRLITTVPGMEGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAH-ADGLILNTFEDLEGPILSQI 234 (476)
Q Consensus 156 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~s~~~le~~~~~~~ 234 (476)
.+. +.. ... .... .....+...+....++. . .. ..... .+..++...+.++++
T Consensus 163 ~~~-~~~-~~p-~~~~--~~~~~~~~~~~~~g~~~---------~-~~------~~~~~~~~~~l~~~~~~~~~~----- 216 (415)
T 3rsc_A 163 VTL-AGT-IDP-LDLP--VFRDTLRDLLAEHGLSR---------S-VV------DCWNHVEQLNLVFVPKAFQIA----- 216 (415)
T ss_dssp HHH-HTC-CCG-GGCH--HHHHHHHHHHHHTTCCC---------C-HH------HHHTCCCSEEEESSCTTTSTT-----
T ss_pred ccc-ccc-CCh-hhHH--HHHHHHHHHHHHcCCCC---------C-hh------hhhcCCCCeEEEEcCcccCCC-----
Confidence 000 000 000 0000 00000000000000000 0 00 11122 277788777777765
Q ss_pred HhcCCCCeeeeccccCcCccCCCccccCCCCcccccchhhhhhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhCCCc
Q 011848 235 RNHSCPNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKS 314 (476)
Q Consensus 235 ~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~ 314 (476)
+.....++.++||+...... ..+|.....++++|||++||......+.+..+++++.+.+.+
T Consensus 217 ~~~~~~~~~~vGp~~~~~~~------------------~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~ 278 (415)
T 3rsc_A 217 GDTFDDRFVFVGPCFDDRRF------------------LGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQPWH 278 (415)
T ss_dssp GGGCCTTEEECCCCCCCCGG------------------GCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTTSSCE
T ss_pred cccCCCceEEeCCCCCCccc------------------CcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhcCCcE
Confidence 33134579999998753221 123444455789999999999877777889999999998899
Q ss_pred EEEEEcCCCCCCCCCCCCCchHHHHHhcCCceeeeccCHHHHhCcCCCCccccccChhHHHHHHHhCCceeccccccchh
Q 011848 315 FLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQ 394 (476)
Q Consensus 315 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~vp~~~ll~~~~~~~~I~HgG~gs~~eal~~GvP~l~~P~~~DQ~ 394 (476)
++|.++.+. ....+. ..++|+.+.+|+|+.++|+++++ ||||||.||++||+++|+|+|++|...||+
T Consensus 279 ~v~~~g~~~-----~~~~l~-----~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~ 346 (415)
T 3rsc_A 279 VVMTLGGQV-----DPAALG-----DLPPNVEAHRWVPHVKVLEQATV--CVTHGGMGTLMEALYWGRPLVVVPQSFDVQ 346 (415)
T ss_dssp EEEECTTTS-----CGGGGC-----CCCTTEEEESCCCHHHHHHHEEE--EEESCCHHHHHHHHHTTCCEEECCCSGGGH
T ss_pred EEEEeCCCC-----ChHHhc-----CCCCcEEEEecCCHHHHHhhCCE--EEECCcHHHHHHHHHhCCCEEEeCCcchHH
Confidence 999886421 001111 24689999999999999999998 999999999999999999999999999999
Q ss_pred hhhHhhhcceeeeEEec-cccCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 011848 395 INSRFVGEVWKLGLDIK-DLCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIK 467 (476)
Q Consensus 395 ~na~r~~e~~G~g~~~~-~~~~~~~l~~ai~~~l~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~i~~l~ 467 (476)
.||.+++ +.|+|+.+. ++++++.|.++|+++|+| ++++++++++++.+.+. ++..++ .+.|+++.
T Consensus 347 ~~a~~l~-~~g~g~~~~~~~~~~~~l~~~i~~ll~~--~~~~~~~~~~~~~~~~~----~~~~~~-~~~i~~~~ 412 (415)
T 3rsc_A 347 PMARRVD-QLGLGAVLPGEKADGDTLLAAVGAVAAD--PALLARVEAMRGHVRRA----GGAARA-ADAVEAYL 412 (415)
T ss_dssp HHHHHHH-HHTCEEECCGGGCCHHHHHHHHHHHHTC--HHHHHHHHHHHHHHHHS----CHHHHH-HHHHHHHH
T ss_pred HHHHHHH-HcCCEEEcccCCCCHHHHHHHHHHHHcC--HHHHHHHHHHHHHHHhc----CHHHHH-HHHHHHHh
Confidence 9999995 789999998 689999999999999999 99999999999999884 443444 45555543
No 11
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=5.3e-41 Score=333.39 Aligned_cols=376 Identities=14% Similarity=0.113 Sum_probs=251.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCccchhhHhhcccccccccccCCCeeEEEcCCCCCCC---CCCCC
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRD---HPRTP 83 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 83 (476)
|||+|++.++.||++|+++||++|++|||+|+|++++.+.+.+... ++.+..++...... .....
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~~~v~~~------------g~~~~~l~~~~~~~~~~~~~~~ 68 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAEV------------GVPMVPVGRAVRAGAREPGELP 68 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGHHHHHHT------------TCCEEECSSCSSGGGSCTTCCC
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHc------------CCceeecCCCHHHHhccccCCH
Confidence 6999999999999999999999999999999999998766666554 37777776332210 00011
Q ss_pred CChHHHHHHHHhhCcHHHHHHHHcCCCCceEEEecCCcccH---HHHHHHhCCceEEEecchhhHHHHHhhhhhhhhcCC
Q 011848 84 DKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMSRA---IDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGE 160 (476)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~ll~~~~~~~D~Ii~D~~~~~~---~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~ 160 (476)
......+..... ..++++.+.. .+||+||+|.....+ ..+|+.+|||++.+..++........+....
T Consensus 69 ~~~~~~~~~~~~---~~~~~l~~~~-~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~~~~~~~~~----- 139 (404)
T 3h4t_A 69 PGAAEVVTEVVA---EWFDKVPAAI-EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSEQSQAERD----- 139 (404)
T ss_dssp TTCGGGHHHHHH---HHHHHHHHHH-TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGGSCHHHHH-----
T ss_pred HHHHHHHHHHHH---HHHHHHHHHh-cCCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCChhHHHHHH-----
Confidence 111222222222 2222222222 389999998665544 7899999999999887764321110000000
Q ss_pred CCCCCCcccCccccccC-CCCCCCCCCCCCCcccCCCCCChHHHHHHHHhhhhccCCEEEEcCccccchHHHHHHHhcCC
Q 011848 161 LPIKGTEDMDRLITTVP-GMEGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSC 239 (476)
Q Consensus 161 ~p~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~ 239 (476)
..+ .. ....+. .+........++.. .+ ... . ...+..+++..+.+.+. ++ ..
T Consensus 140 --~~~--~~--~~~~~~~~~~~~~~~lgl~~~------~~-~~~---~-----~~~~~~l~~~~~~l~p~-----~~-~~ 192 (404)
T 3h4t_A 140 --MYN--QG--ADRLFGDAVNSHRASIGLPPV------EH-LYD---Y-----GYTDQPWLAADPVLSPL-----RP-TD 192 (404)
T ss_dssp --HHH--HH--HHHHHHHHHHHHHHHTTCCCC------CC-HHH---H-----HHCSSCEECSCTTTSCC-----CT-TC
T ss_pred --HHH--HH--HHHHhHHHHHHHHHHcCCCCC------cc-hhh---c-----cccCCeEEeeCcceeCC-----CC-CC
Confidence 000 00 000000 00000000001100 00 000 0 11233455666666554 33 44
Q ss_pred CCeeeeccccCcCccCCCccccCCCCcccccchhhhhhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhCCCcEEEEE
Q 011848 240 PNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVI 319 (476)
Q Consensus 240 ~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~ 319 (476)
++++++|++..+... ..++++.+|++. ++++|||++||... ..+.+..+++++.+.+.++||++
T Consensus 193 ~~~~~~G~~~~~~~~-------------~~~~~l~~~l~~--~~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~~~vv~~~ 256 (404)
T 3h4t_A 193 LGTVQTGAWILPDQR-------------PLSAELEGFLRA--GSPPVYVGFGSGPA-PAEAARVAIEAVRAQGRRVVLSS 256 (404)
T ss_dssp CSCCBCCCCCCCCCC-------------CCCHHHHHHHHT--SSCCEEECCTTSCC-CTTHHHHHHHHHHHTTCCEEEEC
T ss_pred CCeEEeCccccCCCC-------------CCCHHHHHHHhc--CCCeEEEECCCCCC-cHHHHHHHHHHHHhCCCEEEEEe
Confidence 689999988754322 345668889874 67899999999986 66788899999999999999998
Q ss_pred cCCCCCCCCCCCCCchHHHHHhcCCceeeeccCHHHHhCcCCCCccccccChhHHHHHHHhCCceeccccccchhhhhHh
Q 011848 320 RPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRF 399 (476)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~vp~~~ll~~~~~~~~I~HgG~gs~~eal~~GvP~l~~P~~~DQ~~na~r 399 (476)
+..... .. . .++|+.+.+|+||.++|+++++ ||||||+||+.||+++|+|+|++|+..||+.||.+
T Consensus 257 g~~~~~------~~-~-----~~~~v~~~~~~~~~~ll~~~d~--~v~~gG~~t~~Eal~~GvP~v~~p~~~dQ~~na~~ 322 (404)
T 3h4t_A 257 GWAGLG------RI-D-----EGDDCLVVGEVNHQVLFGRVAA--VVHHGGAGTTTAVTRAGAPQVVVPQKADQPYYAGR 322 (404)
T ss_dssp TTTTCC------CS-S-----CCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHH
T ss_pred CCcccc------cc-c-----CCCCEEEecCCCHHHHHhhCcE--EEECCcHHHHHHHHHcCCCEEEcCCcccHHHHHHH
Confidence 643111 11 1 3589999999999999999887 99999999999999999999999999999999999
Q ss_pred hhcceeeeEEec-cccCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHhc
Q 011848 400 VGEVWKLGLDIK-DLCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIKMMS 470 (476)
Q Consensus 400 ~~e~~G~g~~~~-~~~~~~~l~~ai~~~l~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~i~~l~~~~ 470 (476)
+ ++.|+|+.++ .+++.+.|.++|+++++ ++|+++++++++.+++ +| ...+.+.|+++....
T Consensus 323 ~-~~~G~g~~l~~~~~~~~~l~~ai~~ll~---~~~~~~~~~~~~~~~~----~~--~~~~~~~i~~~~~~~ 384 (404)
T 3h4t_A 323 V-ADLGVGVAHDGPTPTVESLSAALATALT---PGIRARAAAVAGTIRT----DG--TTVAAKLLLEAISRQ 384 (404)
T ss_dssp H-HHHTSEEECSSSSCCHHHHHHHHHHHTS---HHHHHHHHHHHTTCCC----CH--HHHHHHHHHHHHHC-
T ss_pred H-HHCCCEeccCcCCCCHHHHHHHHHHHhC---HHHHHHHHHHHHHHhh----hH--HHHHHHHHHHHHhhC
Confidence 9 5799999998 78899999999999997 7899999999988764 23 455567777766543
No 12
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=1.2e-39 Score=323.69 Aligned_cols=385 Identities=16% Similarity=0.150 Sum_probs=258.9
Q ss_pred CCccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCccchhhHhhcccccccccccCCCeeEEEcCCCCCCCCC---
Q 011848 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHP--- 80 (476)
Q Consensus 4 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 80 (476)
|.|+||+|++.++.||++|++.||++|+++||+|+|++++.+.+.+... ++.+..++..++....
T Consensus 2 m~M~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~------------G~~~~~~~~~~~~~~~~~~ 69 (402)
T 3ia7_A 2 MRQRHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKAA------------GAEVVLYKSEFDTFHVPEV 69 (402)
T ss_dssp CCCCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHT------------TCEEEECCCGGGTSSSSSS
T ss_pred CCCCEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHHHc------------CCEEEeccccccccccccc
Confidence 6678999999999999999999999999999999999998766666554 3778877643322110
Q ss_pred CCCCChHHHHHH-HH---hhCcHHHHHHHHcCCCCceEEEec-CCcccHHHHHHHhCCceEEEecchhhHHHHHhhhhhh
Q 011848 81 RTPDKFPELVDS-LN---CATPPLLKEMVSDSKSPVNCIITD-GYMSRAIDAAREVGVSIIYFRTISACAFWSFHCIPDI 155 (476)
Q Consensus 81 ~~~~~~~~~~~~-~~---~~~~~~~~~ll~~~~~~~D~Ii~D-~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~ 155 (476)
.........+.. +. ......+.++++++ +||+||+| .+..++..+|+.+|||++.+.+....... +...+..
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~-~~~~~~~ 146 (402)
T 3ia7_A 70 VKQEDAETQLHLVYVRENVAILRAAEEALGDN--PPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEH-YSLFKEL 146 (402)
T ss_dssp SCCTTHHHHHHHHHHHHHHHHHHHHHHHHTTC--CCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTT-BCHHHHH
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHHhcc--CCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCcc-ccccccc
Confidence 111222222222 22 22334556666665 99999999 78889999999999999998654321100 0000000
Q ss_pred hhcCCCCCCCCcccCccccccCCCCCCCCCCCCCCcccCCCCCChHHHHHHHHhhhhccC-CEEEEcCccccchHHHHHH
Q 011848 156 IDAGELPIKGTEDMDRLITTVPGMEGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHA-DGLILNTFEDLEGPILSQI 234 (476)
Q Consensus 156 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~s~~~le~~~~~~~ 234 (476)
.+... . ... ... ..+...+...+....+. . .. .. ..... +..++...++++++
T Consensus 147 ~~~~~-~-~~~-~~~--~~~~~~~~~~~~~~g~~---------~-~~----~~--~~~~~~~~~l~~~~~~~~~~----- 200 (402)
T 3ia7_A 147 WKSNG-Q-RHP-ADV--EAVHSVLVDLLGKYGVD---------T-PV----KE--YWDEIEGLTIVFLPKSFQPF----- 200 (402)
T ss_dssp HHHHT-C-CCG-GGS--HHHHHHHHHHHHTTTCC---------S-CH----HH--HHTCCCSCEEESSCGGGSTT-----
T ss_pred ccccc-c-cCh-hhH--HHHHHHHHHHHHHcCCC---------C-Ch----hh--hhcCCCCeEEEEcChHhCCc-----
Confidence 00000 0 000 000 00000000000000000 0 00 00 01222 66777777777665
Q ss_pred HhcCCCCeeeeccccCcCccCCCccccCCCCcccccchhhhhhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhCCCc
Q 011848 235 RNHSCPNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKS 314 (476)
Q Consensus 235 ~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~ 314 (476)
+.....++.++||+...... ..+|+....++++|||++||......+.+..+++++.+.+.+
T Consensus 201 ~~~~~~~~~~vGp~~~~~~~------------------~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~ 262 (402)
T 3ia7_A 201 AETFDERFAFVGPTLTGRDG------------------QPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWH 262 (402)
T ss_dssp GGGCCTTEEECCCCCCC----------------------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTSSCE
T ss_pred cccCCCCeEEeCCCCCCccc------------------CCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcCCcE
Confidence 33124679999998653221 112444355789999999999877777889999999998889
Q ss_pred EEEEEcCCCCCCCCCCCCCchHHHHHhcCCceeeeccCHHHHhCcCCCCccccccChhHHHHHHHhCCceecccc-ccch
Q 011848 315 FLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPS-FADQ 393 (476)
Q Consensus 315 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~vp~~~ll~~~~~~~~I~HgG~gs~~eal~~GvP~l~~P~-~~DQ 393 (476)
++|.++... ....+. ..++|+.+.+|+|+.++|+++++ +|||||.||+.||+++|+|+|++|. ..||
T Consensus 263 ~~~~~g~~~-----~~~~~~-----~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~~q 330 (402)
T 3ia7_A 263 VVMAIGGFL-----DPAVLG-----PLPPNVEAHQWIPFHSVLAHARA--CLTHGTTGAVLEAFAAGVPLVLVPHFATEA 330 (402)
T ss_dssp EEEECCTTS-----CGGGGC-----SCCTTEEEESCCCHHHHHTTEEE--EEECCCHHHHHHHHHTTCCEEECGGGCGGG
T ss_pred EEEEeCCcC-----ChhhhC-----CCCCcEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCCCcccH
Confidence 998886421 001111 14689999999999999999997 9999999999999999999999999 9999
Q ss_pred hhhhHhhhcceeeeEEec-cccCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 011848 394 QINSRFVGEVWKLGLDIK-DLCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIK 467 (476)
Q Consensus 394 ~~na~r~~e~~G~g~~~~-~~~~~~~l~~ai~~~l~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~i~~l~ 467 (476)
..||.+++ +.|+|+.+. ++++++.|.+++.++|+| ++++++++++++.+.+. ++..++ .+.|+++.
T Consensus 331 ~~~a~~~~-~~g~g~~~~~~~~~~~~l~~~~~~ll~~--~~~~~~~~~~~~~~~~~----~~~~~~-~~~i~~~~ 397 (402)
T 3ia7_A 331 APSAERVI-ELGLGSVLRPDQLEPASIREAVERLAAD--SAVRERVRRMQRDILSS----GGPARA-ADEVEAYL 397 (402)
T ss_dssp HHHHHHHH-HTTSEEECCGGGCSHHHHHHHHHHHHHC--HHHHHHHHHHHHHHHTS----CHHHHH-HHHHHHHH
T ss_pred HHHHHHHH-HcCCEEEccCCCCCHHHHHHHHHHHHcC--HHHHHHHHHHHHHHhhC----ChHHHH-HHHHHHHH
Confidence 99999995 789999998 688999999999999999 99999999999998773 444444 55555544
No 13
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=9.7e-40 Score=328.34 Aligned_cols=375 Identities=11% Similarity=0.117 Sum_probs=241.1
Q ss_pred CCccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCccchhhHhhcccccccccccCCCeeEEEcCCCCCC-CC---
Q 011848 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPR-DH--- 79 (476)
Q Consensus 4 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--- 79 (476)
+.||||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+... ++.|+.++...+. +.
T Consensus 18 ~~~mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~~v~~~------------G~~~~~i~~~~~~~~~~~~ 85 (441)
T 2yjn_A 18 GSHMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDITAA------------GLTAVPVGTDVDLVDFMTH 85 (441)
T ss_dssp -CCCEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHHHHHTT------------TCCEEECSCCCCHHHHHHH
T ss_pred CCccEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHHHHHhC------------CCceeecCCccchHHHhhh
Confidence 4678999999999999999999999999999999999998765555443 4788887753210 00
Q ss_pred -----------CCC----CC--ChH---HHHHHHH---hh------CcHHHHHHHHcCCCCceEEEecCCcccHHHHHHH
Q 011848 80 -----------PRT----PD--KFP---ELVDSLN---CA------TPPLLKEMVSDSKSPVNCIITDGYMSRAIDAARE 130 (476)
Q Consensus 80 -----------~~~----~~--~~~---~~~~~~~---~~------~~~~~~~ll~~~~~~~D~Ii~D~~~~~~~~~A~~ 130 (476)
... .. ... ..+..+. .. ....+.++++++ +||+||+|.++.++..+|+.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~pDlVv~d~~~~~~~~aA~~ 163 (441)
T 2yjn_A 86 AGHDIIDYVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRKW--RPDLVIWEPLTFAAPIAAAV 163 (441)
T ss_dssp TTHHHHHHHTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHHH--CCSEEEECTTCTHHHHHHHH
T ss_pred hhcccccccccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHhc--CCCEEEecCcchhHHHHHHH
Confidence 000 10 111 1111111 11 223344455555 99999999988899999999
Q ss_pred hCCceEEEecchhhHHHHHhhhhhhhhcCCCCCCCCcccCccccccCCCCCCCCCCCCCCcccCCCCCChHHHHHHHHhh
Q 011848 131 VGVSIIYFRTISACAFWSFHCIPDIIDAGELPIKGTEDMDRLITTVPGMEGFLRCRDLPSFCRVNDPMDPHLLLFARETR 210 (476)
Q Consensus 131 lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 210 (476)
+|||++.+...+.........+... .++.|... .... + ........+...
T Consensus 164 lgiP~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~---~~~~------~-------------------~~~l~~~~~~~g 213 (441)
T 2yjn_A 164 TGTPHARLLWGPDITTRARQNFLGL--LPDQPEEH---REDP------L-------------------AEWLTWTLEKYG 213 (441)
T ss_dssp HTCCEEEECSSCCHHHHHHHHHHHH--GGGSCTTT---CCCH------H-------------------HHHHHHHHHHTT
T ss_pred cCCCEEEEecCCCcchhhhhhhhhh--cccccccc---ccch------H-------------------HHHHHHHHHHcC
Confidence 9999999865443221111000000 01111000 0000 0 000000111100
Q ss_pred h------hccCCEEEEcCccccchHHHHHHHhcCCCCeeeeccccCcCccCCCccccCCCCcccccchhhhhhhcCCCCc
Q 011848 211 L------SAHADGLILNTFEDLEGPILSQIRNHSCPNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQS 284 (476)
Q Consensus 211 ~------~~~~~~~l~~s~~~le~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 284 (476)
. ....+.++.++.+.++++ . .++. ..+++.... .+.++.+|++...+++
T Consensus 214 ~~~~~~~~~~~~~~l~~~~~~~~~~-----~--~~~~-~~~~~~~~~-----------------~~~~~~~~l~~~~~~~ 268 (441)
T 2yjn_A 214 GPAFDEEVVVGQWTIDPAPAAIRLD-----T--GLKT-VGMRYVDYN-----------------GPSVVPEWLHDEPERR 268 (441)
T ss_dssp CCCCCGGGTSCSSEEECSCGGGSCC-----C--CCCE-EECCCCCCC-----------------SSCCCCGGGSSCCSSC
T ss_pred CCCCCccccCCCeEEEecCccccCC-----C--CCCC-CceeeeCCC-----------------CCcccchHhhcCCCCC
Confidence 0 012344555554444432 1 2221 112221110 1122456887556789
Q ss_pred eEEEEecccccC---CHHHHHHHHHHHhhCCCcEEEEEcCCCCCCCCCCCCCchHHHHHhcCCceeeeccCHHHHhCcCC
Q 011848 285 VIYVSFGSIAVM---SRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSA 361 (476)
Q Consensus 285 ~V~vs~Gs~~~~---~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~vp~~~ll~~~~ 361 (476)
+|||++||.... ..+.+..+++++.+.+.+++|+++.... ..+.. .++|+.+.+|+||.++|+.++
T Consensus 269 ~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~------~~l~~-----~~~~v~~~~~~~~~~ll~~ad 337 (441)
T 2yjn_A 269 RVCLTLGISSRENSIGQVSIEELLGAVGDVDAEIIATFDAQQL------EGVAN-----IPDNVRTVGFVPMHALLPTCA 337 (441)
T ss_dssp EEEEEC----------CCSTTTTHHHHHTSSSEEEECCCTTTT------SSCSS-----CCSSEEECCSCCHHHHGGGCS
T ss_pred EEEEECCCCcccccChHHHHHHHHHHHHcCCCEEEEEECCcch------hhhcc-----CCCCEEEecCCCHHHHHhhCC
Confidence 999999998753 3345677889998889999999864311 12211 467999999999999999999
Q ss_pred CCccccccChhHHHHHHHhCCceeccccccchhhhhHhhhcceeeeEEec-cccCHHHHHHHHHHHHhHhHHHHHHHHHH
Q 011848 362 VGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIK-DLCDRNIVEKAVNDLMVERKEEFMESADR 440 (476)
Q Consensus 362 ~~~~I~HgG~gs~~eal~~GvP~l~~P~~~DQ~~na~r~~e~~G~g~~~~-~~~~~~~l~~ai~~~l~~~~~~~~~~a~~ 440 (476)
+ ||||||+||++||+++|+|+|++|...||+.||.+++ +.|+|+.++ ++++++.|.++|+++|+| +++++++++
T Consensus 338 ~--~V~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~-~~g~g~~~~~~~~~~~~l~~~i~~ll~~--~~~~~~~~~ 412 (441)
T 2yjn_A 338 A--TVHHGGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQ-EFGAGIALPVPELTPDQLRESVKRVLDD--PAHRAGAAR 412 (441)
T ss_dssp E--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHH-HHTSEEECCTTTCCHHHHHHHHHHHHHC--HHHHHHHHH
T ss_pred E--EEECCCHHHHHHHHHhCCCEEEeCCcccHHHHHHHHH-HcCCEEEcccccCCHHHHHHHHHHHhcC--HHHHHHHHH
Confidence 7 9999999999999999999999999999999999995 789999998 689999999999999999 999999999
Q ss_pred HHHHHHHHHhcCCChHHHHHHHHHHHHH
Q 011848 441 MANLAKKSVNKGGSSYCNLDRLVNDIKM 468 (476)
Q Consensus 441 l~~~~~~~~~~~g~~~~~~~~~i~~l~~ 468 (476)
+++.+++. .+ ...+.+.|+++..
T Consensus 413 ~~~~~~~~----~~-~~~~~~~i~~~~~ 435 (441)
T 2yjn_A 413 MRDDMLAE----PS-PAEVVGICEELAA 435 (441)
T ss_dssp HHHHHHTS----CC-HHHHHHHHHHHHH
T ss_pred HHHHHHcC----CC-HHHHHHHHHHHHH
Confidence 99998874 33 4455666666543
No 14
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=1.7e-38 Score=318.36 Aligned_cols=387 Identities=16% Similarity=0.187 Sum_probs=252.1
Q ss_pred CCC-CCccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCccchhhHhhcccccccccccCCCeeEEEcCCCCCCCC
Q 011848 1 MEK-QDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDH 79 (476)
Q Consensus 1 m~~-~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (476)
|.+ |.||||+|++.++.||++|++.|+++|+++||+|++++++.+.+.+... +++++.++...+...
T Consensus 1 M~~~m~m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~~~------------g~~~~~~~~~~~~~~ 68 (430)
T 2iyf_A 1 MTTQTTPAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAAT------------GPRPVLYHSTLPGPD 68 (430)
T ss_dssp -------CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHTT------------SCEEEECCCCSCCTT
T ss_pred CCCccccceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHHHhC------------CCEEEEcCCcCcccc
Confidence 554 5678999999999999999999999999999999999998765554433 478888875433221
Q ss_pred CC---CCCChHHHHHHH---HhhCcHHHHHHHHcCCCCceEEEecCCcccHHHHHHHhCCceEEEecchhhHHHHHhhhh
Q 011848 80 PR---TPDKFPELVDSL---NCATPPLLKEMVSDSKSPVNCIITDGYMSRAIDAAREVGVSIIYFRTISACAFWSFHCIP 153 (476)
Q Consensus 80 ~~---~~~~~~~~~~~~---~~~~~~~~~~ll~~~~~~~D~Ii~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~ 153 (476)
.. ....+...+..+ .......+.+++++. +||+||+|.+..++..+|+.+|||+|.+.+.+.........+.
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~ 146 (430)
T 2iyf_A 69 ADPEAWGSTLLDNVEPFLNDAIQALPQLADAYADD--IPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGYEEEVA 146 (430)
T ss_dssp SCGGGGCSSHHHHHHHHHHHHHHHHHHHHHHHTTS--CCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTHHHHTH
T ss_pred ccccccchhhHHHHHHHHHHHHHHHHHHHHHhhcc--CCCEEEECCccHHHHHHHHHcCCCEEEEecccccccccccccc
Confidence 00 012222222222 122344556666665 9999999988778999999999999998865431100000000
Q ss_pred hhhhcCCCCCCCCcccCccccccCCCCCCCCCCCCCCcccCCCCCChHHHHHHHHhhhhccCCEEEEcCccccchHHHHH
Q 011848 154 DIIDAGELPIKGTEDMDRLITTVPGMEGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQ 233 (476)
Q Consensus 154 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~ 233 (476)
.......... . .. ......+...+....++ ... ......++.+++++.+.++++.
T Consensus 147 ~~~~~~~~~~--~-~~---~~~~~~~~~~~~~~g~~---------~~~-------~~~~~~~~~~l~~~~~~~~~~~--- 201 (430)
T 2iyf_A 147 EPMWREPRQT--E-RG---RAYYARFEAWLKENGIT---------EHP-------DTFASHPPRSLVLIPKALQPHA--- 201 (430)
T ss_dssp HHHHHHHHHS--H-HH---HHHHHHHHHHHHHTTCC---------SCH-------HHHHHCCSSEEECSCGGGSTTG---
T ss_pred cchhhhhccc--h-HH---HHHHHHHHHHHHHhCCC---------CCH-------HHHhcCCCcEEEeCcHHhCCCc---
Confidence 0000000000 0 00 00000000000000000 000 0111246889999988888652
Q ss_pred HHhcCCCC-eeeeccccCcCccCCCccccCCCCcccccchhhhhhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhC-
Q 011848 234 IRNHSCPN-IYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHS- 311 (476)
Q Consensus 234 ~~~~~~~~-~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~- 311 (476)
+. ..++ ++++||....... ..+|.....++++|||++||......+.+..++++++..
T Consensus 202 -~~-~~~~~v~~vG~~~~~~~~------------------~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~ 261 (430)
T 2iyf_A 202 -DR-VDEDVYTFVGACQGDRAE------------------EGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLP 261 (430)
T ss_dssp -GG-SCTTTEEECCCCC-----------------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTTCT
T ss_pred -cc-CCCccEEEeCCcCCCCCC------------------CCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCC
Confidence 22 4457 9999986532110 112444344678999999999855667788899999886
Q ss_pred CCcEEEEEcCCCCCCCCCCCCCchHHHHHhcCCceeeeccCHHHHhCcCCCCccccccChhHHHHHHHhCCceecccccc
Q 011848 312 KKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFA 391 (476)
Q Consensus 312 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~vp~~~ll~~~~~~~~I~HgG~gs~~eal~~GvP~l~~P~~~ 391 (476)
+.+++|.++... ....+. ..++|+.+.+|+||.++|+++++ ||||||+||++||+++|+|+|++|...
T Consensus 262 ~~~~~~~~G~~~-----~~~~l~-----~~~~~v~~~~~~~~~~~l~~ad~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~ 329 (430)
T 2iyf_A 262 GWHLVLQIGRKV-----TPAELG-----ELPDNVEVHDWVPQLAILRQADL--FVTHAGAGGSQEGLATATPMIAVPQAV 329 (430)
T ss_dssp TEEEEEECC--------CGGGGC-----SCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSH
T ss_pred CeEEEEEeCCCC-----ChHHhc-----cCCCCeEEEecCCHHHHhhccCE--EEECCCccHHHHHHHhCCCEEECCCcc
Confidence 788888886421 001111 14579999999999999999997 999999999999999999999999999
Q ss_pred chhhhhHhhhcceeeeEEec-cccCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 011848 392 DQQINSRFVGEVWKLGLDIK-DLCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDI 466 (476)
Q Consensus 392 DQ~~na~r~~e~~G~g~~~~-~~~~~~~l~~ai~~~l~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~i~~l 466 (476)
||..|+.+++ +.|+|+.++ +.++.++|.++|.++++| +++++++.++++++.+. + +..+. .+.++++
T Consensus 330 ~q~~~a~~~~-~~g~g~~~~~~~~~~~~l~~~i~~ll~~--~~~~~~~~~~~~~~~~~---~-~~~~~-~~~i~~~ 397 (430)
T 2iyf_A 330 DQFGNADMLQ-GLGVARKLATEEATADLLRETALALVDD--PEVARRLRRIQAEMAQE---G-GTRRA-ADLIEAE 397 (430)
T ss_dssp HHHHHHHHHH-HTTSEEECCCC-CCHHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHH---C-HHHHH-HHHHHTT
T ss_pred chHHHHHHHH-HcCCEEEcCCCCCCHHHHHHHHHHHHcC--HHHHHHHHHHHHHHHhc---C-cHHHH-HHHHHHH
Confidence 9999999995 789999998 678999999999999998 89999999999998875 4 33344 4444443
No 15
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=100.00 E-value=4.1e-38 Score=310.87 Aligned_cols=355 Identities=14% Similarity=0.126 Sum_probs=247.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCccchhhHhhcccccccccccCCCeeEEEcCCCCCCCC-------
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDH------- 79 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 79 (476)
|||++++.++.||++|+++|+++|+++||+|++++++...+.+... ++.++.++.....+.
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~------------g~~~~~~~~~~~~~~~~~~~~~ 68 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVVTGV------------GLPAVATTDLPIRHFITTDREG 68 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHT------------TCCEEESCSSCHHHHHHBCTTS
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHHHhC------------CCEEEEeCCcchHHHHhhhccc
Confidence 5999999999999999999999999999999999987754444433 366777654220000
Q ss_pred CC--C-CC-ChHHHH-H----HHHhhCcHHHHHHHHcCCCCceEEEecCCcccHHHHHHHhCCceEEEecchhhHHHHHh
Q 011848 80 PR--T-PD-KFPELV-D----SLNCATPPLLKEMVSDSKSPVNCIITDGYMSRAIDAAREVGVSIIYFRTISACAFWSFH 150 (476)
Q Consensus 80 ~~--~-~~-~~~~~~-~----~~~~~~~~~~~~ll~~~~~~~D~Ii~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~ 150 (476)
.. . .. .....+ . .........+.++++++ +||+||+|.+..++..+|+.+|||++.+...+...
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~~----- 141 (384)
T 2p6p_A 69 RPEAIPSDPVAQARFTGRWFARMAASSLPRMLDFSRAW--RPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVDA----- 141 (384)
T ss_dssp CBCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCC-----
T ss_pred CccccCcchHHHHHHHHHHHHhhHHHHHHHHHHHHhcc--CCcEEEECcchhhHHHHHHhcCCCEEEeccCCccc-----
Confidence 00 0 10 111111 1 11122334555666665 99999999888889999999999999875432100
Q ss_pred hhhhhhhcCCCCCCCCcccCccccccCCCCCCCCCCCCCCcccCCCCCChHHHHHHHHhh--hhccCCEEEEcCccccch
Q 011848 151 CIPDIIDAGELPIKGTEDMDRLITTVPGMEGFLRCRDLPSFCRVNDPMDPHLLLFARETR--LSAHADGLILNTFEDLEG 228 (476)
Q Consensus 151 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~s~~~le~ 228 (476)
. .. ...+. . ........+. ....++.+++++.+.+++
T Consensus 142 ---------------~-~~---~~~~~---~-------------------~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~ 180 (384)
T 2p6p_A 142 ---------------D-GI---HPGAD---A-------------------ELRPELSELGLERLPAPDLFIDICPPSLRP 180 (384)
T ss_dssp ---------------T-TT---HHHHH---H-------------------HTHHHHHHTTCSSCCCCSEEEECSCGGGSC
T ss_pred ---------------c-hh---hHHHH---H-------------------HHHHHHHHcCCCCCCCCCeEEEECCHHHCC
Confidence 0 00 00000 0 0000000000 001156888998887776
Q ss_pred HHHHHHHhcCC-CCeeeeccccCcCccCCCccccCCCCcccccchhhhhhhcCCCCceEEEEecccccC-----CHHHHH
Q 011848 229 PILSQIRNHSC-PNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVM-----SRDQLI 302 (476)
Q Consensus 229 ~~~~~~~~~~~-~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~-----~~~~~~ 302 (476)
+ ++ .. .++.+++. . . +.++.+|++...++++|||++||.... +.+.+.
T Consensus 181 ~-----~~-~~~~~~~~~~~-~--~-----------------~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~ 234 (384)
T 2p6p_A 181 A-----NA-APARMMRHVAT-S--R-----------------QCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLR 234 (384)
T ss_dssp T-----TS-CCCEECCCCCC-C--C-----------------CCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHH
T ss_pred C-----CC-CCCCceEecCC-C--C-----------------CCCCCchhhcCCCCCEEEEECCCCCccccccccHHHHH
Confidence 4 22 21 23444421 1 0 112446887546678999999999854 446788
Q ss_pred HHHHHHhhCCCcEEEEEcCCCCCCCCCCCCCchHHHHHhcCCceeeeccCHHHHhCcCCCCccccccChhHHHHHHHhCC
Q 011848 303 EFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGM 382 (476)
Q Consensus 303 ~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~vp~~~ll~~~~~~~~I~HgG~gs~~eal~~Gv 382 (476)
.+++++.+.+.+++|+++.. ..+.+ +..++|+.+ +|+||.++|+++++ ||||||+||++||+++|+
T Consensus 235 ~~~~al~~~~~~~~~~~g~~----------~~~~l-~~~~~~v~~-~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~ 300 (384)
T 2p6p_A 235 GLAKDLVRWDVELIVAAPDT----------VAEAL-RAEVPQARV-GWTPLDVVAPTCDL--LVHHAGGVSTLTGLSAGV 300 (384)
T ss_dssp HHHHHHHTTTCEEEEECCHH----------HHHHH-HHHCTTSEE-ECCCHHHHGGGCSE--EEECSCTTHHHHHHHTTC
T ss_pred HHHHHHhcCCcEEEEEeCCC----------CHHhh-CCCCCceEE-cCCCHHHHHhhCCE--EEeCCcHHHHHHHHHhCC
Confidence 89999998899999988521 11222 235789999 99999999999987 999999999999999999
Q ss_pred ceeccccccchhhhhHhhhcceeeeEEec-cccCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHhcCCChHHHHHH
Q 011848 383 PMICWPSFADQQINSRFVGEVWKLGLDIK-DLCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDR 461 (476)
Q Consensus 383 P~l~~P~~~DQ~~na~r~~e~~G~g~~~~-~~~~~~~l~~ai~~~l~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~ 461 (476)
|+|++|...||+.||.+++ +.|+|+.++ +.++.++|.++|+++|+| ++++++++++++++++. + + ...+.+
T Consensus 301 P~v~~p~~~dq~~~a~~~~-~~g~g~~~~~~~~~~~~l~~~i~~ll~~--~~~~~~~~~~~~~~~~~---~-~-~~~~~~ 372 (384)
T 2p6p_A 301 PQLLIPKGSVLEAPARRVA-DYGAAIALLPGEDSTEAIADSCQELQAK--DTYARRAQDLSREISGM---P-L-PATVVT 372 (384)
T ss_dssp CEEECCCSHHHHHHHHHHH-HHTSEEECCTTCCCHHHHHHHHHHHHHC--HHHHHHHHHHHHHHHTS---C-C-HHHHHH
T ss_pred CEEEccCcccchHHHHHHH-HCCCeEecCcCCCCHHHHHHHHHHHHcC--HHHHHHHHHHHHHHHhC---C-C-HHHHHH
Confidence 9999999999999999994 789999998 678999999999999999 99999999999999985 3 3 455566
Q ss_pred HHHHHHHh
Q 011848 462 LVNDIKMM 469 (476)
Q Consensus 462 ~i~~l~~~ 469 (476)
.|+.+-.+
T Consensus 373 ~i~~~~~~ 380 (384)
T 2p6p_A 373 ALEQLAHH 380 (384)
T ss_dssp HHHHHHHH
T ss_pred HHHHHhhh
Confidence 77776554
No 16
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=100.00 E-value=3.5e-37 Score=305.65 Aligned_cols=347 Identities=15% Similarity=0.148 Sum_probs=221.3
Q ss_pred CCccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCccchhhHhhcccccccccccCCCeeEEEcCCCCC-------
Q 011848 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLP------- 76 (476)
Q Consensus 4 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 76 (476)
..+|||+|++.++.||++|++.|+++|+++||+|++++++.+.+.+... ++.+..++....
T Consensus 13 ~~~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~------------G~~~~~~~~~~~~~~~~~~ 80 (398)
T 4fzr_A 13 GSHMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVTGA------------GLPFAPTCPSLDMPEVLSW 80 (398)
T ss_dssp --CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHHHT------------TCCEEEEESSCCHHHHHSB
T ss_pred CCceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHhC------------CCeeEecCCccchHhhhhh
Confidence 4578999999999999999999999999999999999997766666554 355555542100
Q ss_pred --CCC-CCCCCChH-------HHHHHHHhhCcHHHHHHHHcCCCCceEEEecCCcccHHHHHHHhCCceEEEecchhhHH
Q 011848 77 --RDH-PRTPDKFP-------ELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMSRAIDAAREVGVSIIYFRTISACAF 146 (476)
Q Consensus 77 --~~~-~~~~~~~~-------~~~~~~~~~~~~~~~~ll~~~~~~~D~Ii~D~~~~~~~~~A~~lgiP~v~~~~~~~~~~ 146 (476)
... ........ ..+..........+.++++++ +||+|++|...+++..+|+.+|||++.+........
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~~~ 158 (398)
T 4fzr_A 81 DREGNRTTMPREEKPLLEHIGRGYGRLVLRMRDEALALAERW--KPDLVLTETYSLTGPLVAATLGIPWIEQSIRLASPE 158 (398)
T ss_dssp CTTSCBCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCCH
T ss_pred hccCcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhC--CCCEEEECccccHHHHHHHhhCCCEEEeccCCCCch
Confidence 000 00000111 112222223344567777776 999999998888899999999999998765532111
Q ss_pred HHHhhhhhhhhcCCCCCCCCcccCccccccCCCCCCCCCCCCCCcccCCCCCChHHHHHHHHhhhhccCCEEEEcCcccc
Q 011848 147 WSFHCIPDIIDAGELPIKGTEDMDRLITTVPGMEGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDL 226 (476)
Q Consensus 147 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~l 226 (476)
........ ++ ...+....+.. ....+..+....+.+
T Consensus 159 ~~~~~~~~--------------------~l---~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~ 194 (398)
T 4fzr_A 159 LIKSAGVG--------------------EL---APELAELGLTD---------------------FPDPLLSIDVCPPSM 194 (398)
T ss_dssp HHHHHHHH--------------------HT---HHHHHTTTCSS---------------------CCCCSEEEECSCGGG
T ss_pred hhhHHHHH--------------------HH---HHHHHHcCCCC---------------------CCCCCeEEEeCChhh
Confidence 10000000 00 00000000000 011233344443343
Q ss_pred chHHHHHHHhcCCCCeeeeccccCcCccCCCccccCCCCcccccchhhhhhhcCCCCceEEEEecccccC--------CH
Q 011848 227 EGPILSQIRNHSCPNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVM--------SR 298 (476)
Q Consensus 227 e~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~--------~~ 298 (476)
..+. .. ...++.++++.. ....+.+|+....++++|||++||.... ..
T Consensus 195 ~~~~----~~-~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~ 250 (398)
T 4fzr_A 195 EAQP----KP-GTTKMRYVPYNG-------------------RNDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGL 250 (398)
T ss_dssp C--------C-CCEECCCCCCCC-------------------SSCCCCHHHHSCCSSCEEECC----------------C
T ss_pred CCCC----CC-CCCCeeeeCCCC-------------------CCCCCchhhhcCCCCCEEEEEccCcccccccccccchH
Confidence 3321 00 001122222110 1122345776556789999999999643 23
Q ss_pred HHHHHHHHHHhhCCCcEEEEEcCCCCCCCCCCCCCchHHHHHhcCCceeeeccCHHHHhCcCCCCccccccChhHHHHHH
Q 011848 299 DQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESI 378 (476)
Q Consensus 299 ~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~vp~~~ll~~~~~~~~I~HgG~gs~~eal 378 (476)
..+..+++++.+.+.+++|+.+... .+.+ +..++|+.+.+|+|+.++|+++++ ||||||.||+.||+
T Consensus 251 ~~~~~~~~al~~~~~~~v~~~~~~~----------~~~l-~~~~~~v~~~~~~~~~~ll~~ad~--~v~~gG~~t~~Ea~ 317 (398)
T 4fzr_A 251 SLLQALSQELPKLGFEVVVAVSDKL----------AQTL-QPLPEGVLAAGQFPLSAIMPACDV--VVHHGGHGTTLTCL 317 (398)
T ss_dssp CSHHHHHHHGGGGTCEEEECCCC-------------------CCTTEEEESCCCHHHHGGGCSE--EEECCCHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCEEEEEeCCcc----------hhhh-ccCCCcEEEeCcCCHHHHHhhCCE--EEecCCHHHHHHHH
Confidence 4578899999999999999886421 1111 125789999999999999999997 99999999999999
Q ss_pred HhCCceeccccccchhhhhHhhhcceeeeEEec-cccCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHH
Q 011848 379 VAGMPMICWPSFADQQINSRFVGEVWKLGLDIK-DLCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKS 448 (476)
Q Consensus 379 ~~GvP~l~~P~~~DQ~~na~r~~e~~G~g~~~~-~~~~~~~l~~ai~~~l~~~~~~~~~~a~~l~~~~~~~ 448 (476)
++|+|+|++|...||..||.+++ +.|+|+.++ ++++++.|.++|.++|+| +++++++++.++.+.+.
T Consensus 318 ~~G~P~v~~p~~~~q~~~a~~~~-~~g~g~~~~~~~~~~~~l~~ai~~ll~~--~~~~~~~~~~~~~~~~~ 385 (398)
T 4fzr_A 318 SEGVPQVSVPVIAEVWDSARLLH-AAGAGVEVPWEQAGVESVLAACARIRDD--SSYVGNARRLAAEMATL 385 (398)
T ss_dssp HTTCCEEECCCSGGGHHHHHHHH-HTTSEEECC-------CHHHHHHHHHHC--THHHHHHHHHHHHHTTS
T ss_pred HhCCCEEecCCchhHHHHHHHHH-HcCCEEecCcccCCHHHHHHHHHHHHhC--HHHHHHHHHHHHHHHcC
Confidence 99999999999999999999994 789999998 788999999999999999 99999999999998873
No 17
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=100.00 E-value=3.6e-36 Score=298.32 Aligned_cols=353 Identities=14% Similarity=0.145 Sum_probs=240.4
Q ss_pred CccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCccchhhHhhcccccccccccCCCeeEEEcCCCCCC-------
Q 011848 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPR------- 77 (476)
Q Consensus 5 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 77 (476)
.||||+|++.++.||++|+++|+++|+++||+|+++++ .+.+.+... ++.+..++.....
T Consensus 19 ~~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~~~~------------G~~~~~~~~~~~~~~~~~~~ 85 (398)
T 3oti_A 19 RHMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRAAAA------------GLEVVDVAPDYSAVKVFEQV 85 (398)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHHHTT------------TCEEEESSTTCCHHHHHHHH
T ss_pred hcCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHHHhC------------CCeeEecCCccCHHHHhhhc
Confidence 46899999999999999999999999999999999999 655555543 4788877642110
Q ss_pred -------------CCCCCCCChHHHHHHHHhhCcHHHHHHHHcCCCCceEEEecCCcccHHHHHHHhCCceEEEecchhh
Q 011848 78 -------------DHPRTPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMSRAIDAAREVGVSIIYFRTISAC 144 (476)
Q Consensus 78 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~D~Ii~D~~~~~~~~~A~~lgiP~v~~~~~~~~ 144 (476)
............+..........+.++++++ +||+||+|...+++..+|+.+|||++.+......
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~~~~ 163 (398)
T 3oti_A 86 AKDNPRFAETVATRPAIDLEEWGVQIAAVNRPLVDGTMALVDDY--RPDLVVYEQGATVGLLAADRAGVPAVQRNQSAWR 163 (398)
T ss_dssp HHHCHHHHHTGGGSCCCSGGGGHHHHHHHHGGGHHHHHHHHHHH--CCSEEEEETTCHHHHHHHHHHTCCEEEECCTTCC
T ss_pred ccCCccccccccCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHc--CCCEEEECchhhHHHHHHHHcCCCEEEEeccCCC
Confidence 0001122233344455555667788888887 9999999988888999999999999987543211
Q ss_pred HHHHHhhhhhhhhcCCCCCCCCcccCccccccCCCCCCCCCCCCCCcccCCCCCChHHHHHHHHhhhhccCCEEEEcCcc
Q 011848 145 AFWSFHCIPDIIDAGELPIKGTEDMDRLITTVPGMEGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFE 224 (476)
Q Consensus 145 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~ 224 (476)
.... ... . ...+...+....+. ....+..+....+
T Consensus 164 ~~~~----~~~-------------~------~~~l~~~~~~~~~~----------------------~~~~~~~~~~~~~ 198 (398)
T 3oti_A 164 TRGM----HRS-------------I------ASFLTDLMDKHQVS----------------------LPEPVATIESFPP 198 (398)
T ss_dssp CTTH----HHH-------------H------HTTCHHHHHHTTCC----------------------CCCCSEEECSSCG
T ss_pred ccch----hhH-------------H------HHHHHHHHHHcCCC----------------------CCCCCeEEEeCCH
Confidence 0000 000 0 00000000000000 0112333333333
Q ss_pred ccchHHHHHHHhcCCCCeeeeccccCcCccCCCccccCCCCcccccchhhhhhhcCCCCceEEEEecccccC--CHHHHH
Q 011848 225 DLEGPILSQIRNHSCPNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVM--SRDQLI 302 (476)
Q Consensus 225 ~le~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~--~~~~~~ 302 (476)
.+..+.. .. .+ .+.++ |. . ....+.+|+....++++|||++||.... ..+.+.
T Consensus 199 ~~~~~~~---~~-~~-~~~~~-~~--~-----------------~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~ 253 (398)
T 3oti_A 199 SLLLEAE---PE-GW-FMRWV-PY--G-----------------GGAVLGDRLPPVPARPEVAITMGTIELQAFGIGAVE 253 (398)
T ss_dssp GGGTTSC---CC-SB-CCCCC-CC--C-----------------CCEECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHH
T ss_pred HHCCCCC---CC-CC-Ccccc-CC--C-----------------CCcCCchhhhcCCCCCEEEEEcCCCccccCcHHHHH
Confidence 3332200 00 00 11111 00 0 0111234665456789999999999643 556788
Q ss_pred HHHHHHhhCCCcEEEEEcCCCCCCCCCCCCCchHHHHHhcCCceeeeccCHHHHhCcCCCCccccccChhHHHHHHHhCC
Q 011848 303 EFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGM 382 (476)
Q Consensus 303 ~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~vp~~~ll~~~~~~~~I~HgG~gs~~eal~~Gv 382 (476)
.+++++.+.+.+++|+.+.... ..+. ..++|+.+.+|+|+.++|+++++ ||||||.||+.||+++|+
T Consensus 254 ~~~~~l~~~~~~~v~~~g~~~~------~~l~-----~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Eal~~G~ 320 (398)
T 3oti_A 254 PIIAAAGEVDADFVLALGDLDI------SPLG-----TLPRNVRAVGWTPLHTLLRTCTA--VVHHGGGGTVMTAIDAGI 320 (398)
T ss_dssp HHHHHHHTSSSEEEEECTTSCC------GGGC-----SCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHHTC
T ss_pred HHHHHHHcCCCEEEEEECCcCh------hhhc-----cCCCcEEEEccCCHHHHHhhCCE--EEECCCHHHHHHHHHhCC
Confidence 8999999999999999864311 1121 14689999999999999999997 999999999999999999
Q ss_pred ceeccccccchhhhh--HhhhcceeeeEEec-cccCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHhcCCChHHHH
Q 011848 383 PMICWPSFADQQINS--RFVGEVWKLGLDIK-DLCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNL 459 (476)
Q Consensus 383 P~l~~P~~~DQ~~na--~r~~e~~G~g~~~~-~~~~~~~l~~ai~~~l~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~ 459 (476)
|+|++|...||..|| .++ ++.|+|+.++ ++++++.|. ++|+| ++++++++++++++.+. .+ ...+
T Consensus 321 P~v~~p~~~dq~~~a~~~~~-~~~g~g~~~~~~~~~~~~l~----~ll~~--~~~~~~~~~~~~~~~~~----~~-~~~~ 388 (398)
T 3oti_A 321 PQLLAPDPRDQFQHTAREAV-SRRGIGLVSTSDKVDADLLR----RLIGD--ESLRTAAREVREEMVAL----PT-PAET 388 (398)
T ss_dssp CEEECCCTTCCSSCTTHHHH-HHHTSEEECCGGGCCHHHHH----HHHHC--HHHHHHHHHHHHHHHTS----CC-HHHH
T ss_pred CEEEcCCCchhHHHHHHHHH-HHCCCEEeeCCCCCCHHHHH----HHHcC--HHHHHHHHHHHHHHHhC----CC-HHHH
Confidence 999999999999999 999 4789999998 677888776 88888 99999999999999874 33 4555
Q ss_pred HHHHHHHH
Q 011848 460 DRLVNDIK 467 (476)
Q Consensus 460 ~~~i~~l~ 467 (476)
.+.++++.
T Consensus 389 ~~~l~~l~ 396 (398)
T 3oti_A 389 VRRIVERI 396 (398)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 66666653
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=100.00 E-value=5e-34 Score=282.28 Aligned_cols=356 Identities=13% Similarity=0.154 Sum_probs=235.3
Q ss_pred ccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCccchhhHhhcccccccccccCCCeeEEEc-CCCCCCCC-----
Q 011848 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTL-TDGLPRDH----- 79 (476)
Q Consensus 6 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~----- 79 (476)
+|||+|++.++.||++|++.|+++|+++||+|++++++...+.+... ++.+..+ +.......
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~------------g~~~~~~~~~~~~~~~~~~~~ 68 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATAHGA------------GLTTAGIRGNDRTGDTGGTTQ 68 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHHHHHHHHHB------------TCEEEEC--------------
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecChhhHHHHHhC------------CCceeeecCCccchhhhhhhc
Confidence 36999999999999999999999999999999999987765555544 3666665 32110000
Q ss_pred C---------CCCCChHHHHHHHHhhC-------cHHHHHHHHcCCCCceEEEecCCcccHHHHHHHhCCceEEEecchh
Q 011848 80 P---------RTPDKFPELVDSLNCAT-------PPLLKEMVSDSKSPVNCIITDGYMSRAIDAAREVGVSIIYFRTISA 143 (476)
Q Consensus 80 ~---------~~~~~~~~~~~~~~~~~-------~~~~~~ll~~~~~~~D~Ii~D~~~~~~~~~A~~lgiP~v~~~~~~~ 143 (476)
. .........+......+ ...+.++++++ +||+|++|...+++..+|+.+|||++.+.....
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~~ 146 (391)
T 3tsa_A 69 LRFPNPAFGQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEAW--RPSVLLVDVCALIGRVLGGLLDLPVVLHRWGVD 146 (391)
T ss_dssp CCSCCGGGGCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCSEEEEETTCHHHHHHHHHTTCCEEEECCSCC
T ss_pred ccccccccccccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHhc--CCCEEEeCcchhHHHHHHHHhCCCEEEEecCCc
Confidence 0 00011112222222223 45567777776 999999998888899999999999999765431
Q ss_pred hHHHHHhhhhhhhhcCCCCCCCCcccCccccccCCCCCCCCCCCCCCcccCCCCCChHHHHHHHHhh--hhccCCEEEEc
Q 011848 144 CAFWSFHCIPDIIDAGELPIKGTEDMDRLITTVPGMEGFLRCRDLPSFCRVNDPMDPHLLLFARETR--LSAHADGLILN 221 (476)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~ 221 (476)
....... .. . ..+ ......... .....+..+..
T Consensus 147 ~~~~~~~---~~-------------~---~~~--------------------------~~~~~~~~~~~~~~~~~~~~~~ 181 (391)
T 3tsa_A 147 PTAGPFS---DR-------------A---HEL--------------------------LDPVCRHHGLTGLPTPELILDP 181 (391)
T ss_dssp CTTTHHH---HH-------------H---HHH--------------------------HHHHHHHTTSSSSCCCSEEEEC
T ss_pred ccccccc---ch-------------H---HHH--------------------------HHHHHHHcCCCCCCCCceEEEe
Confidence 1100000 00 0 000 000000000 00112444554
Q ss_pred CccccchHHHHHHHhcCCCCeeeeccccCcCccCCCccccCCCCcccccchhhhhhhcCCCCceEEEEeccccc--CC-H
Q 011848 222 TFEDLEGPILSQIRNHSCPNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAV--MS-R 298 (476)
Q Consensus 222 s~~~le~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~--~~-~ 298 (476)
..++++.+ .......+.++ |.. ....+.+|+....++++|+|++||... .. .
T Consensus 182 ~~~~~~~~-----~~~~~~~~~~~-p~~-------------------~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~ 236 (391)
T 3tsa_A 182 CPPSLQAS-----DAPQGAPVQYV-PYN-------------------GSGAFPAWGAARTSARRVCICMGRMVLNATGPA 236 (391)
T ss_dssp SCGGGSCT-----TSCCCEECCCC-CCC-------------------CCEECCGGGSSCCSSEEEEEECCHHHHHHHCSH
T ss_pred cChhhcCC-----CCCccCCeeee-cCC-------------------CCcCCCchhhcCCCCCEEEEEcCCCCCcccchH
Confidence 44444332 11000112222 110 011233566655678999999999853 23 6
Q ss_pred HHHHHHHHHHhhC-CCcEEEEEcCCCCCCCCCCCCCchHHHHHhcCCceeeeccCHHHHhCcCCCCccccccChhHHHHH
Q 011848 299 DQLIEFYYGLVHS-KKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLES 377 (476)
Q Consensus 299 ~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~vp~~~ll~~~~~~~~I~HgG~gs~~ea 377 (476)
..+..++++ .+. +.+++|..+.... ..+. ..++|+.+.+|+|+.++|+++++ ||||||.||+.||
T Consensus 237 ~~~~~~~~~-~~~p~~~~v~~~~~~~~------~~l~-----~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea 302 (391)
T 3tsa_A 237 PLLRAVAAA-TELPGVEAVIAVPPEHR------ALLT-----DLPDNARIAESVPLNLFLRTCEL--VICAGGSGTAFTA 302 (391)
T ss_dssp HHHHHHHHH-HTSTTEEEEEECCGGGG------GGCT-----TCCTTEEECCSCCGGGTGGGCSE--EEECCCHHHHHHH
T ss_pred HHHHHHHHh-ccCCCeEEEEEECCcch------hhcc-----cCCCCEEEeccCCHHHHHhhCCE--EEeCCCHHHHHHH
Confidence 778888888 777 7888888763211 1122 14689999999999999999997 9999999999999
Q ss_pred HHhCCceeccccccchhhhhHhhhcceeeeEEecc---ccCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHhcCCC
Q 011848 378 IVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKD---LCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGS 454 (476)
Q Consensus 378 l~~GvP~l~~P~~~DQ~~na~r~~e~~G~g~~~~~---~~~~~~l~~ai~~~l~~~~~~~~~~a~~l~~~~~~~~~~~g~ 454 (476)
+++|+|+|++|...||+.|+.+++ +.|+|+.++. ..+++.|.++|.++|+| ++++++++++++.+.+. .+
T Consensus 303 ~~~G~P~v~~p~~~~q~~~a~~~~-~~g~g~~~~~~~~~~~~~~l~~ai~~ll~~--~~~~~~~~~~~~~~~~~----~~ 375 (391)
T 3tsa_A 303 TRLGIPQLVLPQYFDQFDYARNLA-AAGAGICLPDEQAQSDHEQFTDSIATVLGD--TGFAAAAIKLSDEITAM----PH 375 (391)
T ss_dssp HHTTCCEEECCCSTTHHHHHHHHH-HTTSEEECCSHHHHTCHHHHHHHHHHHHTC--THHHHHHHHHHHHHHTS----CC
T ss_pred HHhCCCEEecCCcccHHHHHHHHH-HcCCEEecCcccccCCHHHHHHHHHHHHcC--HHHHHHHHHHHHHHHcC----CC
Confidence 999999999999999999999994 7899999863 48899999999999999 99999999999998873 44
Q ss_pred hHHHHHHHHHHHH
Q 011848 455 SYCNLDRLVNDIK 467 (476)
Q Consensus 455 ~~~~~~~~i~~l~ 467 (476)
. ..+.+.++++.
T Consensus 376 ~-~~~~~~i~~~~ 387 (391)
T 3tsa_A 376 P-AALVRTLENTA 387 (391)
T ss_dssp H-HHHHHHHHHC-
T ss_pred H-HHHHHHHHHHH
Confidence 3 44455666543
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=100.00 E-value=4.7e-32 Score=269.95 Aligned_cols=368 Identities=19% Similarity=0.207 Sum_probs=244.4
Q ss_pred CccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCccchhhHhhcccccccccccCCCeeEEEcCCC----------
Q 011848 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDG---------- 74 (476)
Q Consensus 5 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 74 (476)
.+|||+|++.++.||++|++.|+++|+++||+|++++++...+.+... ++.+..++..
T Consensus 19 ~~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~------------g~~~~~~~~~~~~~~~~~~~ 86 (412)
T 3otg_A 19 RHMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTLRKL------------GFEPVATGMPVFDGFLAALR 86 (412)
T ss_dssp CSCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHT------------TCEEEECCCCHHHHHHHHHH
T ss_pred ceeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHHHHHHHhc------------CCceeecCcccccchhhhhh
Confidence 478999999999999999999999999999999999997654444433 4777777630
Q ss_pred --CCCCCC------CCCCChHHHHHHH-HhhCcHHHHHHHHcCCCCceEEEecCCcccHHHHHHHhCCceEEEecchhhH
Q 011848 75 --LPRDHP------RTPDKFPELVDSL-NCATPPLLKEMVSDSKSPVNCIITDGYMSRAIDAAREVGVSIIYFRTISACA 145 (476)
Q Consensus 75 --~~~~~~------~~~~~~~~~~~~~-~~~~~~~~~~ll~~~~~~~D~Ii~D~~~~~~~~~A~~lgiP~v~~~~~~~~~ 145 (476)
...... .........+... .......+.++++++ +||+|++|....++..+|+.+|||+|.+.......
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~~~~ 164 (412)
T 3otg_A 87 IRFDTDSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIERL--RPDLVVQEISNYGAGLAALKAGIPTICHGVGRDTP 164 (412)
T ss_dssp HHHSCSCCTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHHH--CCSEEEEETTCHHHHHHHHHHTCCEEEECCSCCCC
T ss_pred hhhcccCCccCChhHhhHHHHHHHhccchHHHHHHHHHHHHhc--CCCEEEECchhhHHHHHHHHcCCCEEEecccccCc
Confidence 000000 0011122222222 222335667777776 99999999887888999999999999875543211
Q ss_pred HHHHhhhhhhhhcCCCCCCCCcccCccccccCCCCCCCCCCCCCCcccCCCCCChHHHHHHHHhhhhccCCEEEEcCccc
Q 011848 146 FWSFHCIPDIIDAGELPIKGTEDMDRLITTVPGMEGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFED 225 (476)
Q Consensus 146 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~ 225 (476)
......+... +. ..... +........ .....+.++..+...
T Consensus 165 ~~~~~~~~~~-------------~~-~~~~~------~g~~~~~~~-------------------~~~~~d~~i~~~~~~ 205 (412)
T 3otg_A 165 DDLTRSIEEE-------------VR-GLAQR------LGLDLPPGR-------------------IDGFGNPFIDIFPPS 205 (412)
T ss_dssp SHHHHHHHHH-------------HH-HHHHH------TTCCCCSSC-------------------CGGGGCCEEECSCGG
T ss_pred hhhhHHHHHH-------------HH-HHHHH------cCCCCCccc-------------------ccCCCCeEEeeCCHH
Confidence 0000000000 00 00000 000000000 013345566666555
Q ss_pred cchHHHHHHHhcCCCCeeeeccccCcCccCCCccccCCCCcccccchhhhh-hhcCCCCceEEEEecccccCCHHHHHHH
Q 011848 226 LEGPILSQIRNHSCPNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAW-LDKQPKQSVIYVSFGSIAVMSRDQLIEF 304 (476)
Q Consensus 226 le~~~~~~~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-l~~~~~~~~V~vs~Gs~~~~~~~~~~~~ 304 (476)
++.+.. . ....-. |+..... .....+.+| .....++++|++++||......+.+..+
T Consensus 206 ~~~~~~----~-~~~~~~---~~~~~~~--------------~~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~ 263 (412)
T 3otg_A 206 LQEPEF----R-ARPRRH---ELRPVPF--------------AEQGDLPAWLSSRDTARPLVYLTLGTSSGGTVEVLRAA 263 (412)
T ss_dssp GSCHHH----H-TCTTEE---ECCCCCC--------------CCCCCCCGGGGGSCTTSCEEEEECTTTTCSCHHHHHHH
T ss_pred hcCCcc----c-CCCCcc---eeeccCC--------------CCCCCCCCccccccCCCCEEEEEcCCCCcCcHHHHHHH
Confidence 554311 1 111111 1111100 001112345 2224578899999999976677888899
Q ss_pred HHHHhhCCCcEEEEEcCCCCCCCCCCCCCchHHHHHhcCCceeeeccCHHHHhCcCCCCccccccChhHHHHHHHhCCce
Q 011848 305 YYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPM 384 (476)
Q Consensus 305 ~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~vp~~~ll~~~~~~~~I~HgG~gs~~eal~~GvP~ 384 (476)
++++.+.+.+++|+.+... ....+.. .++|+.+.+|+|+.++|+++++ ||+|||.||++||+++|+|+
T Consensus 264 ~~~l~~~~~~~~~~~g~~~-----~~~~l~~-----~~~~v~~~~~~~~~~~l~~ad~--~v~~~g~~t~~Ea~a~G~P~ 331 (412)
T 3otg_A 264 IDGLAGLDADVLVASGPSL-----DVSGLGE-----VPANVRLESWVPQAALLPHVDL--VVHHGGSGTTLGALGAGVPQ 331 (412)
T ss_dssp HHHHHTSSSEEEEECCSSC-----CCTTCCC-----CCTTEEEESCCCHHHHGGGCSE--EEESCCHHHHHHHHHHTCCE
T ss_pred HHHHHcCCCEEEEEECCCC-----Chhhhcc-----CCCcEEEeCCCCHHHHHhcCcE--EEECCchHHHHHHHHhCCCE
Confidence 9999988999999986431 0112221 4679999999999999999997 99999999999999999999
Q ss_pred eccccccchhhhhHhhhcceeeeEEec-cccCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHH
Q 011848 385 ICWPSFADQQINSRFVGEVWKLGLDIK-DLCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLV 463 (476)
Q Consensus 385 l~~P~~~DQ~~na~r~~e~~G~g~~~~-~~~~~~~l~~ai~~~l~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~i 463 (476)
|++|...||..|+.+++ +.|+|..++ +++++++|.++|.++|+| +++++++.+.++++.+. .+ ...+.+.+
T Consensus 332 v~~p~~~~q~~~~~~v~-~~g~g~~~~~~~~~~~~l~~ai~~ll~~--~~~~~~~~~~~~~~~~~----~~-~~~~~~~~ 403 (412)
T 3otg_A 332 LSFPWAGDSFANAQAVA-QAGAGDHLLPDNISPDSVSGAAKRLLAE--ESYRAGARAVAAEIAAM----PG-PDEVVRLL 403 (412)
T ss_dssp EECCCSTTHHHHHHHHH-HHTSEEECCGGGCCHHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHS----CC-HHHHHTTH
T ss_pred EecCCchhHHHHHHHHH-HcCCEEecCcccCCHHHHHHHHHHHHhC--HHHHHHHHHHHHHHhcC----CC-HHHHHHHH
Confidence 99999999999999995 789999998 678999999999999999 99999999999998874 44 34445555
Q ss_pred HHHH
Q 011848 464 NDIK 467 (476)
Q Consensus 464 ~~l~ 467 (476)
+++.
T Consensus 404 ~~l~ 407 (412)
T 3otg_A 404 PGFA 407 (412)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 5554
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.97 E-value=1.7e-29 Score=246.61 Aligned_cols=319 Identities=16% Similarity=0.129 Sum_probs=198.6
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCccchh-hHhhcccccccccccCCCeeEEEcCC-CCCCCC-CCCCC
Q 011848 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYD-RVIRHSSDAFSRYMQIPGFQFKTLTD-GLPRDH-PRTPD 84 (476)
Q Consensus 8 ~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~ 84 (476)
||+|...|+.||++|.++||++|+++||+|+|++++...+ .+.+.. ++.++.++- ++.... .....
T Consensus 4 ~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~~-----------g~~~~~i~~~~~~~~~~~~~~~ 72 (365)
T 3s2u_A 4 NVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPKA-----------GLPLHLIQVSGLRGKGLKSLVK 72 (365)
T ss_dssp EEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGGG-----------TCCEEECC--------------
T ss_pred cEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhhc-----------CCcEEEEECCCcCCCCHHHHHH
Confidence 8999999999999999999999999999999999765432 333322 366776652 222111 00111
Q ss_pred ChHHHHHHHHhhCcHHHHHHHHcCCCCceEEEecCCcc--cHHHHHHHhCCceEEEecchhhHHHHHhhhhhhhhcCCCC
Q 011848 85 KFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMS--RAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGELP 162 (476)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~ll~~~~~~~D~Ii~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~p 162 (476)
.+..++.. ......+++++ +||+||++..+. .+..+|+.+|||+++.-..
T Consensus 73 ~~~~~~~~-----~~~~~~~l~~~--~PDvVi~~g~~~s~p~~laA~~~~iP~vihe~n--------------------- 124 (365)
T 3s2u_A 73 APLELLKS-----LFQALRVIRQL--RPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQN--------------------- 124 (365)
T ss_dssp CHHHHHHH-----HHHHHHHHHHH--CCSEEEECSSSTHHHHHHHHHHTTCCEEEEECS---------------------
T ss_pred HHHHHHHH-----HHHHHHHHHhc--CCCEEEEcCCcchHHHHHHHHHcCCCEEEEecc---------------------
Confidence 22222222 22356778887 999999986554 4667899999999974211
Q ss_pred CCCCcccCccccccCCCCCCCCCCCCCCcccCCCCCChHHHHHHHHhhhhccCCEEEEcCccccchHHHHHHHhcCCCCe
Q 011848 163 IKGTEDMDRLITTVPGMEGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSCPNI 242 (476)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~~~ 242 (476)
.++++.+++ .. ..++.++ .++++..+ ...+.
T Consensus 125 ------------~~~G~~nr~-------------------------l~--~~a~~v~-~~~~~~~~---------~~~k~ 155 (365)
T 3s2u_A 125 ------------AVAGTANRS-------------------------LA--PIARRVC-EAFPDTFP---------ASDKR 155 (365)
T ss_dssp ------------SSCCHHHHH-------------------------HG--GGCSEEE-ESSTTSSC---------C---C
T ss_pred ------------hhhhhHHHh-------------------------hc--cccceee-eccccccc---------CcCcE
Confidence 111211100 00 1122222 22222111 22356
Q ss_pred eeeccccCcCccCCCccccCCCCcccccchhhhhhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhC----CCcEEEE
Q 011848 243 YSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHS----KKSFLWV 318 (476)
Q Consensus 243 ~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~----~~~~i~~ 318 (476)
+++|........... . .......+++.|+|..||.... ...+.+.+++... +..++|.
T Consensus 156 ~~~g~pvr~~~~~~~--------------~--~~~~~~~~~~~ilv~gGs~g~~--~~~~~~~~al~~l~~~~~~~vi~~ 217 (365)
T 3s2u_A 156 LTTGNPVRGELFLDA--------------H--ARAPLTGRRVNLLVLGGSLGAE--PLNKLLPEALAQVPLEIRPAIRHQ 217 (365)
T ss_dssp EECCCCCCGGGCCCT--------------T--SSCCCTTSCCEEEECCTTTTCS--HHHHHHHHHHHTSCTTTCCEEEEE
T ss_pred EEECCCCchhhccch--------------h--hhcccCCCCcEEEEECCcCCcc--ccchhhHHHHHhcccccceEEEEe
Confidence 677755433221100 0 0111134678899999998642 2334455666554 3456777
Q ss_pred EcCCCCCCCCCCCCCchHHHHHhcCCceeeeccCHH-HHhCcCCCCccccccChhHHHHHHHhCCceeccccc----cch
Q 011848 319 IRPDLISGKDGENQIPEELLEATKERGCIAGWVPQE-EVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSF----ADQ 393 (476)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~vp~~-~ll~~~~~~~~I~HgG~gs~~eal~~GvP~l~~P~~----~DQ 393 (476)
++.... +.+.+.+ ...+.|+.+.+|+++. ++|+.+|+ +|||+|.+|+.|++++|+|+|++|+- .+|
T Consensus 218 ~G~~~~------~~~~~~~-~~~~~~~~v~~f~~dm~~~l~~aDl--vI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q 288 (365)
T 3s2u_A 218 AGRQHA------EITAERY-RTVAVEADVAPFISDMAAAYAWADL--VICRAGALTVSELTAAGLPAFLVPLPHAIDDHQ 288 (365)
T ss_dssp CCTTTH------HHHHHHH-HHTTCCCEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECC-----CCHH
T ss_pred cCcccc------cccccee-cccccccccccchhhhhhhhccceE--EEecCCcchHHHHHHhCCCeEEeccCCCCCcHH
Confidence 653211 1112222 2356788999999974 69999998 99999999999999999999999974 589
Q ss_pred hhhhHhhhcceeeeEEec-cccCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHH
Q 011848 394 QINSRFVGEVWKLGLDIK-DLCDRNIVEKAVNDLMVERKEEFMESADRMANLAKK 447 (476)
Q Consensus 394 ~~na~r~~e~~G~g~~~~-~~~~~~~l~~ai~~~l~~~~~~~~~~a~~l~~~~~~ 447 (476)
..||..++ +.|+|+.++ ++++++.|.++|.++++| ++.++ +|++..++
T Consensus 289 ~~NA~~l~-~~G~a~~l~~~~~~~~~L~~~i~~ll~d--~~~~~---~m~~~a~~ 337 (365)
T 3s2u_A 289 TRNAEFLV-RSGAGRLLPQKSTGAAELAAQLSEVLMH--PETLR---SMADQARS 337 (365)
T ss_dssp HHHHHHHH-TTTSEEECCTTTCCHHHHHHHHHHHHHC--THHHH---HHHHHHHH
T ss_pred HHHHHHHH-HCCCEEEeecCCCCHHHHHHHHHHHHCC--HHHHH---HHHHHHHh
Confidence 99999995 789999998 789999999999999997 65444 44444444
No 21
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.95 E-value=4e-27 Score=204.48 Aligned_cols=163 Identities=20% Similarity=0.385 Sum_probs=136.1
Q ss_pred cccchhhhhhhcCCCCceEEEEecccc-cCCHHHHHHHHHHHhhCCCcEEEEEcCCCCCCCCCCCCCchHHHHHhcCCce
Q 011848 268 KIDRSCMAWLDKQPKQSVIYVSFGSIA-VMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGC 346 (476)
Q Consensus 268 ~~~~~l~~~l~~~~~~~~V~vs~Gs~~-~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~ 346 (476)
+.+.++.+|++...++++|||++||.. ......+..+++++.+.+.+++|+++... ++. .++|+.
T Consensus 6 ~l~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~----------~~~----~~~~v~ 71 (170)
T 2o6l_A 6 PLPKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNK----------PDT----LGLNTR 71 (170)
T ss_dssp CCCHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSC----------CTT----CCTTEE
T ss_pred CCCHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcC----------ccc----CCCcEE
Confidence 355678899986667899999999986 44667788899999988999999986321 111 457999
Q ss_pred eeeccCHHHHhCcCCCCccccccChhHHHHHHHhCCceeccccccchhhhhHhhhcceeeeEEec-cccCHHHHHHHHHH
Q 011848 347 IAGWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIK-DLCDRNIVEKAVND 425 (476)
Q Consensus 347 ~~~~vp~~~ll~~~~~~~~I~HgG~gs~~eal~~GvP~l~~P~~~DQ~~na~r~~e~~G~g~~~~-~~~~~~~l~~ai~~ 425 (476)
+.+|+||.+++.|..+++||||||+||++||+++|+|+|++|...||..||.+++ +.|+|+.++ ++++.++|.++|.+
T Consensus 72 ~~~~~~~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~-~~g~g~~~~~~~~~~~~l~~~i~~ 150 (170)
T 2o6l_A 72 LYKWIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMK-ARGAAVRVDFNTMSSTDLLNALKR 150 (170)
T ss_dssp EESSCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHH-TTTSEEECCTTTCCHHHHHHHHHH
T ss_pred EecCCCHHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHH-HcCCeEEeccccCCHHHHHHHHHH
Confidence 9999999999955444459999999999999999999999999999999999994 789999998 68899999999999
Q ss_pred HHhHhHHHHHHHHHHHHHHHHH
Q 011848 426 LMVERKEEFMESADRMANLAKK 447 (476)
Q Consensus 426 ~l~~~~~~~~~~a~~l~~~~~~ 447 (476)
+++| ++|+++++++++.+++
T Consensus 151 ll~~--~~~~~~a~~~~~~~~~ 170 (170)
T 2o6l_A 151 VIND--PSYKENVMKLSRIQHD 170 (170)
T ss_dssp HHHC--HHHHHHHHHHC-----
T ss_pred HHcC--HHHHHHHHHHHHHhhC
Confidence 9998 8999999999998863
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.86 E-value=3.8e-20 Score=180.67 Aligned_cols=332 Identities=13% Similarity=0.079 Sum_probs=199.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCccchh-hHhhcccccccccccCCCeeEEEcCCC-CCCCCCCCCC
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYD-RVIRHSSDAFSRYMQIPGFQFKTLTDG-LPRDHPRTPD 84 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 84 (476)
|||++++.+..||..+++.|+++|+++||+|++++...... ..... .++.+..++.. +.. .
T Consensus 7 mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~-----------~g~~~~~~~~~~~~~------~ 69 (364)
T 1f0k_A 7 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPK-----------HGIEIDFIRISGLRG------K 69 (364)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGG-----------GTCEEEECCCCCCTT------C
T ss_pred cEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhccc-----------cCCceEEecCCccCc------C
Confidence 79999998888999999999999999999999999765322 11111 13666665421 111 1
Q ss_pred ChHHHHHHHH--hhCcHHHHHHHHcCCCCceEEEecCCc--ccHHHHHHHhCCceEEEecchhhHHHHHhhhhhhhhcCC
Q 011848 85 KFPELVDSLN--CATPPLLKEMVSDSKSPVNCIITDGYM--SRAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGE 160 (476)
Q Consensus 85 ~~~~~~~~~~--~~~~~~~~~ll~~~~~~~D~Ii~D~~~--~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~ 160 (476)
.....+.... ......+.+++++. +||+|+++... ..+..++..+|+|++.......
T Consensus 70 ~~~~~~~~~~~~~~~~~~l~~~l~~~--~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~~----------------- 130 (364)
T 1f0k_A 70 GIKALIAAPLRIFNAWRQARAIMKAY--KPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNGI----------------- 130 (364)
T ss_dssp CHHHHHTCHHHHHHHHHHHHHHHHHH--CCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSSS-----------------
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhc--CCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCCC-----------------
Confidence 1111110000 01223456667775 99999998643 3467788899999986532210
Q ss_pred CCCCCCcccCccccccCCCCCCCCCCCCCCcccCCCCCChHHHHHHHHhhhhccCCEEEEcCccccchHHHHHHHhcCCC
Q 011848 161 LPIKGTEDMDRLITTVPGMEGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHSCP 240 (476)
Q Consensus 161 ~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~~~ 240 (476)
++. .. +.. ...++.+++.+.. ..+
T Consensus 131 ----------------~~~----------------------~~---~~~--~~~~d~v~~~~~~-------------~~~ 154 (364)
T 1f0k_A 131 ----------------AGL----------------------TN---KWL--AKIATKVMQAFPG-------------AFP 154 (364)
T ss_dssp ----------------CCH----------------------HH---HHH--TTTCSEEEESSTT-------------SSS
T ss_pred ----------------CcH----------------------HH---HHH--HHhCCEEEecChh-------------hcC
Confidence 000 00 000 1234444443311 112
Q ss_pred CeeeeccccCcCccCCCccccCCCCcccccchhhhhhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhC--CCcEEEE
Q 011848 241 NIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHS--KKSFLWV 318 (476)
Q Consensus 241 ~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~--~~~~i~~ 318 (476)
++.++|........ .... ..+.+....++++|++..|+.. .......+++++... +.++++.
T Consensus 155 ~~~~i~n~v~~~~~-------------~~~~-~~~~~~~~~~~~~il~~~g~~~--~~k~~~~li~a~~~l~~~~~~l~i 218 (364)
T 1f0k_A 155 NAEVVGNPVRTDVL-------------ALPL-PQQRLAGREGPVRVLVVGGSQG--ARILNQTMPQVAAKLGDSVTIWHQ 218 (364)
T ss_dssp SCEECCCCCCHHHH-------------TSCC-HHHHHTTCCSSEEEEEECTTTC--CHHHHHHHHHHHHHHGGGEEEEEE
T ss_pred CceEeCCccchhhc-------------ccch-hhhhcccCCCCcEEEEEcCchH--hHHHHHHHHHHHHHhcCCcEEEEE
Confidence 34455532211000 0000 0111221235667888888875 233344555665544 4566666
Q ss_pred EcCCCCCCCCCCCCCchHHHH---Hhc-CCceeeeccC-HHHHhCcCCCCccccccChhHHHHHHHhCCceeccccc---
Q 011848 319 IRPDLISGKDGENQIPEELLE---ATK-ERGCIAGWVP-QEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSF--- 390 (476)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~---~~~-~nv~~~~~vp-~~~ll~~~~~~~~I~HgG~gs~~eal~~GvP~l~~P~~--- 390 (476)
++.. . .+.+.+ +.+ +|+.+.+|++ ...++..+++ +|+++|.+++.||+++|+|+|+.|..
T Consensus 219 ~G~~------~----~~~l~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~--~v~~sg~~~~~EAma~G~Pvi~~~~~g~~ 286 (364)
T 1f0k_A 219 SGKG------S----QQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADV--VVCRSGALTVSEIAAAGLPALFVPFQHKD 286 (364)
T ss_dssp CCTT------C----HHHHHHHHHHTTCTTSEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECCCCCTT
T ss_pred cCCc------h----HHHHHHHHhhcCCCceEEecchhhHHHHHHhCCE--EEECCchHHHHHHHHhCCCEEEeeCCCCc
Confidence 6532 1 122221 222 5899999995 4779999998 99999999999999999999999987
Q ss_pred cchhhhhHhhhcceeeeEEec-cccCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHH
Q 011848 391 ADQQINSRFVGEVWKLGLDIK-DLCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIKM 468 (476)
Q Consensus 391 ~DQ~~na~r~~e~~G~g~~~~-~~~~~~~l~~ai~~~l~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~i~~l~~ 468 (476)
.||..|+..+. +.|.|..++ .+++.++|.++|.++ | +..+++..+-+++..+ ..+ +..+.+.++++..
T Consensus 287 ~~q~~~~~~~~-~~g~g~~~~~~d~~~~~la~~i~~l--~--~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~y~ 355 (364)
T 1f0k_A 287 RQQYWNALPLE-KAGAAKIIEQPQLSVDAVANTLAGW--S--RETLLTMAERARAASI----PDA-TERVANEVSRVAR 355 (364)
T ss_dssp CHHHHHHHHHH-HTTSEEECCGGGCCHHHHHHHHHTC--C--HHHHHHHHHHHHHTCC----TTH-HHHHHHHHHHHHT
T ss_pred hhHHHHHHHHH-hCCcEEEeccccCCHHHHHHHHHhc--C--HHHHHHHHHHHHHhhc----cCH-HHHHHHHHHHHHH
Confidence 79999999995 679999887 667799999999998 4 6666655555444322 233 4444444444433
No 23
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.63 E-value=2.3e-14 Score=132.80 Aligned_cols=115 Identities=9% Similarity=0.072 Sum_probs=87.8
Q ss_pred CCceEEEEecccccCCHHHHHHHHHHHhhCCCcEEEEEcCCCCCCCCCCCCCchHHHHH--hcCCceeeeccCHH-HHhC
Q 011848 282 KQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEA--TKERGCIAGWVPQE-EVLA 358 (476)
Q Consensus 282 ~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~nv~~~~~vp~~-~ll~ 358 (476)
..+.|+|++|.... ......+++++.... ++.++++.. ....+.+.+. ..+|+.+.+|+++. +++.
T Consensus 156 ~~~~ILv~~GG~d~--~~l~~~vl~~L~~~~-~i~vv~G~~--------~~~~~~l~~~~~~~~~v~v~~~~~~m~~~m~ 224 (282)
T 3hbm_A 156 KKYDFFICMGGTDI--KNLSLQIASELPKTK-IISIATSSS--------NPNLKKLQKFAKLHNNIRLFIDHENIAKLMN 224 (282)
T ss_dssp CCEEEEEECCSCCT--TCHHHHHHHHSCTTS-CEEEEECTT--------CTTHHHHHHHHHTCSSEEEEESCSCHHHHHH
T ss_pred cCCeEEEEECCCch--hhHHHHHHHHhhcCC-CEEEEECCC--------chHHHHHHHHHhhCCCEEEEeCHHHHHHHHH
Confidence 35689999997642 335667778887654 566666432 1223333221 23589999999975 5999
Q ss_pred cCCCCccccccChhHHHHHHHhCCceeccccccchhhhhHhhhcceeeeEEec
Q 011848 359 HSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIK 411 (476)
Q Consensus 359 ~~~~~~~I~HgG~gs~~eal~~GvP~l~~P~~~DQ~~na~r~~e~~G~g~~~~ 411 (476)
.+++ +|++|| +|++|+++.|+|++++|...+|..||..++ +.|+++.+.
T Consensus 225 ~aDl--vI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~-~~G~~~~~~ 273 (282)
T 3hbm_A 225 ESNK--LIISAS-SLVNEALLLKANFKAICYVKNQESTATWLA-KKGYEVEYK 273 (282)
T ss_dssp TEEE--EEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHH-HTTCEEECG
T ss_pred HCCE--EEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHH-HCCCEEEcc
Confidence 9998 999999 899999999999999999999999999995 789999885
No 24
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.62 E-value=6.9e-16 Score=137.12 Aligned_cols=132 Identities=12% Similarity=0.057 Sum_probs=96.9
Q ss_pred CCCCceEEEEecccccCCHHHHHHH-----HHHHhhCC-CcEEEEEcCCCCCCCCCCCCCchHHHHHh---------c--
Q 011848 280 QPKQSVIYVSFGSIAVMSRDQLIEF-----YYGLVHSK-KSFLWVIRPDLISGKDGENQIPEELLEAT---------K-- 342 (476)
Q Consensus 280 ~~~~~~V~vs~Gs~~~~~~~~~~~~-----~~al~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~---------~-- 342 (476)
..++++|||+.||... -.+.+..+ ++++...+ .+++++++..... ....+.+.. |
T Consensus 25 ~~~~~~VlVtgGS~~~-~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~~-------~~~~~~~~~~~~~~~~l~p~~ 96 (224)
T 2jzc_A 25 IIEEKALFVTCGATVP-FPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYSS-------EFEHLVQERGGQRESQKIPID 96 (224)
T ss_dssp CCCSCCEEEECCSCCS-CHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSCC-------CCCSHHHHHTCEECSCCCSSC
T ss_pred CCCCCEEEEEcCCchH-HHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCchh-------hHHHHHHhhhccccccccccc
Confidence 3468999999999842 34444444 37887777 7899999754210 111111001 1
Q ss_pred ---------------C--CceeeeccCHH-HHhC-cCCCCccccccChhHHHHHHHhCCceeccccc----cchhhhhHh
Q 011848 343 ---------------E--RGCIAGWVPQE-EVLA-HSAVGGFLTHCGWNSTLESIVAGMPMICWPSF----ADQQINSRF 399 (476)
Q Consensus 343 ---------------~--nv~~~~~vp~~-~ll~-~~~~~~~I~HgG~gs~~eal~~GvP~l~~P~~----~DQ~~na~r 399 (476)
. ++.+.+|+++. ++|+ .+++ +|||||.||++|++++|+|+|++|.. .||..||++
T Consensus 97 ~~~~~~~~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Adl--vIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~ 174 (224)
T 2jzc_A 97 QFGCGDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDL--VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADK 174 (224)
T ss_dssp TTCTTCSCEEEESTTTSSEEEECCSSSSHHHHHHHHCSC--EEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHH
T ss_pred cccccccccccccccCCceEEEeeccchHHHHHHhcCCE--EEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHH
Confidence 1 34566888875 7999 9998 99999999999999999999999974 369999999
Q ss_pred hhcceeeeEEeccccCHHHHHHHHHHH
Q 011848 400 VGEVWKLGLDIKDLCDRNIVEKAVNDL 426 (476)
Q Consensus 400 ~~e~~G~g~~~~~~~~~~~l~~ai~~~ 426 (476)
++ +.|+++.+ +.+.|.++|.++
T Consensus 175 l~-~~G~~~~~----~~~~L~~~i~~l 196 (224)
T 2jzc_A 175 FV-ELGYVWSC----APTETGLIAGLR 196 (224)
T ss_dssp HH-HHSCCCEE----CSCTTTHHHHHH
T ss_pred HH-HCCCEEEc----CHHHHHHHHHHH
Confidence 95 78999766 677888888877
No 25
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.43 E-value=6.2e-12 Score=122.86 Aligned_cols=162 Identities=12% Similarity=0.110 Sum_probs=97.2
Q ss_pred CCceEEEEecccccCCHHHHHHHHHHHhhC-----CCcEEEEEcCCCCCCCCCCCCCchHHHHH--hcCCceeeeccCH-
Q 011848 282 KQSVIYVSFGSIAVMSRDQLIEFYYGLVHS-----KKSFLWVIRPDLISGKDGENQIPEELLEA--TKERGCIAGWVPQ- 353 (476)
Q Consensus 282 ~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~nv~~~~~vp~- 353 (476)
+++.|+++.|...... .+..+++++... +.++++..+.+ ..+.+.+.+. ..+++.+.+++++
T Consensus 197 ~~~~vl~~~gr~~~~k--~~~~ll~a~~~l~~~~~~~~lv~~~g~~--------~~~~~~l~~~~~~~~~v~~~g~~g~~ 266 (376)
T 1v4v_A 197 EGPYVTVTMHRRENWP--LLSDLAQALKRVAEAFPHLTFVYPVHLN--------PVVREAVFPVLKGVRNFVLLDPLEYG 266 (376)
T ss_dssp SSCEEEECCCCGGGGG--GHHHHHHHHHHHHHHCTTSEEEEECCSC--------HHHHHHHHHHHTTCTTEEEECCCCHH
T ss_pred CCCEEEEEeCcccchH--HHHHHHHHHHHHHhhCCCeEEEEECCCC--------HHHHHHHHHHhccCCCEEEECCCCHH
Confidence 4567777777553221 234455555432 45555554321 0111222221 1358888866654
Q ss_pred --HHHhCcCCCCccccccChhHHHHHHHhCCceeccccccchhhhhHhhhcceeeeEEeccccCHHHHHHHHHHHHhHhH
Q 011848 354 --EEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMVERK 431 (476)
Q Consensus 354 --~~ll~~~~~~~~I~HgG~gs~~eal~~GvP~l~~P~~~DQ~~na~r~~e~~G~g~~~~~~~~~~~l~~ai~~~l~~~~ 431 (476)
.++++.+++ ||+.+| |.+.||+++|+|+|+.+...++... + + .|.|+.++ .++++|.++|.++++|
T Consensus 267 ~~~~~~~~ad~--~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~~---~-~-~g~g~lv~--~d~~~la~~i~~ll~d-- 334 (376)
T 1v4v_A 267 SMAALMRASLL--LVTDSG-GLQEEGAALGVPVVVLRNVTERPEG---L-K-AGILKLAG--TDPEGVYRVVKGLLEN-- 334 (376)
T ss_dssp HHHHHHHTEEE--EEESCH-HHHHHHHHTTCCEEECSSSCSCHHH---H-H-HTSEEECC--SCHHHHHHHHHHHHTC--
T ss_pred HHHHHHHhCcE--EEECCc-CHHHHHHHcCCCEEeccCCCcchhh---h-c-CCceEECC--CCHHHHHHHHHHHHhC--
Confidence 578999997 898884 4566999999999998876666652 3 3 47787774 3899999999999997
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHhc
Q 011848 432 EEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIKMMS 470 (476)
Q Consensus 432 ~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~i~~l~~~~ 470 (476)
+..+++..+.++.+ ..+++ ...+.++++++...+
T Consensus 335 ~~~~~~~~~~~~~~----~~~~~-~~~i~~~i~~~~~~~ 368 (376)
T 1v4v_A 335 PEELSRMRKAKNPY----GDGKA-GLMVARGVAWRLGLG 368 (376)
T ss_dssp HHHHHHHHHSCCSS----CCSCH-HHHHHHHHHHHTTSS
T ss_pred hHhhhhhcccCCCC----CCChH-HHHHHHHHHHHhccc
Confidence 65554444322222 12333 344455555555443
No 26
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.40 E-value=3.4e-12 Score=125.37 Aligned_cols=332 Identities=11% Similarity=0.051 Sum_probs=171.9
Q ss_pred CCCCccEEEEEcCCCccCHHHHHHHHHHHHhC-CCEEEEEeCccchh---hHhhcccccccccccCCCeeEEEcCCCCCC
Q 011848 2 EKQDHVHVAILPLPAVGHVNSMLNLAELLGHA-GIKITFLNTEHYYD---RVIRHSSDAFSRYMQIPGFQFKTLTDGLPR 77 (476)
Q Consensus 2 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~r-GH~Vt~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (476)
.+|.|+||++++. ++....=+..|.++|.++ |+++.++.+...++ .+.+..+ . .|++ .+. +
T Consensus 21 ~~~~m~ki~~v~G-tr~~~~~~a~li~~l~~~~~~~~~~~~tG~h~~~~~~~~~~~~----i---~~~~---~l~--~-- 85 (396)
T 3dzc_A 21 QSNAMKKVLIVFG-TRPEAIKMAPLVQQLCQDNRFVAKVCVTGQHREMLDQVLELFS----I---TPDF---DLN--I-- 85 (396)
T ss_dssp ---CCEEEEEEEC-SHHHHHHHHHHHHHHHHCTTEEEEEEECCSSSHHHHHHHHHTT----C---CCSE---ECC--C--
T ss_pred HhCCCCeEEEEEe-ccHhHHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhcC----C---CCce---eee--c--
Confidence 4677889988874 444555567788999987 89987555434332 2212211 0 1111 111 0
Q ss_pred CCCCCCCChHHHHHHHHhhCcHHHHHHHHcCCCCceEEEe--cCCc-ccHHHHHHHhCCceEEEecchhhHHHHHhhhhh
Q 011848 78 DHPRTPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIIT--DGYM-SRAIDAAREVGVSIIYFRTISACAFWSFHCIPD 154 (476)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~D~Ii~--D~~~-~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~ 154 (476)
.......... .......+.++++++ +||+|++ |..+ +.+..+|..+|||++.+...
T Consensus 86 --~~~~~~~~~~----~~~~~~~l~~~l~~~--kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~~ag------------- 144 (396)
T 3dzc_A 86 --MEPGQTLNGV----TSKILLGMQQVLSSE--QPDVVLVHGDTATTFAASLAAYYQQIPVGHVEAG------------- 144 (396)
T ss_dssp --CCTTCCHHHH----HHHHHHHHHHHHHHH--CCSEEEEETTSHHHHHHHHHHHTTTCCEEEETCC-------------
T ss_pred --CCCCCCHHHH----HHHHHHHHHHHHHhc--CCCEEEEECCchhHHHHHHHHHHhCCCEEEEECC-------------
Confidence 0011222222 222345678888887 9999986 3233 34578899999998754211
Q ss_pred hhhcCCCCCCCCcccCccccccCCCCCCCCCCCCCCcccCCCCCChHHHHHHHHhhhhccCCEEEEcCccccchHHHHHH
Q 011848 155 IIDAGELPIKGTEDMDRLITTVPGMEGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQI 234 (476)
Q Consensus 155 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~ 234 (476)
+ +...+. .. +.+...+.. ....++.+++.+-. ..+++
T Consensus 145 --------------~-rs~~~~---------~~-------------~~~~~~r~~-~~~~a~~~~~~se~-----~~~~l 181 (396)
T 3dzc_A 145 --------------L-RTGNIY---------SP-------------WPEEGNRKL-TAALTQYHFAPTDT-----SRANL 181 (396)
T ss_dssp --------------C-CCSCTT---------SS-------------TTHHHHHHH-HHHTCSEEEESSHH-----HHHHH
T ss_pred --------------c-cccccc---------cC-------------CcHHHHHHH-HHHhcCEEECCCHH-----HHHHH
Confidence 0 000000 00 001111111 01345677776632 22222
Q ss_pred Hh-cCC-CCeeeeccccCcCccCCCccccCCCCcccc----cchhhhhhh-cCCCCceEEEEecccccCCHHHHHHHHHH
Q 011848 235 RN-HSC-PNIYSIGPLNAHLKVRIPEKTYSSSSLWKI----DRSCMAWLD-KQPKQSVIYVSFGSIAVMSRDQLIEFYYG 307 (476)
Q Consensus 235 ~~-~~~-~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~----~~~l~~~l~-~~~~~~~V~vs~Gs~~~~~~~~~~~~~~a 307 (476)
.. +.. .+++++|-...+.....+ ..... ..++.+.+. -..+++.|+++.+-....... +..++++
T Consensus 182 ~~~G~~~~ki~vvGn~~~d~~~~~~-------~~~~~~~~~~~~~r~~lg~l~~~~~~vlv~~hR~~~~~~~-~~~ll~A 253 (396)
T 3dzc_A 182 LQENYNAENIFVTGNTVIDALLAVR-------EKIHTDMDLQATLESQFPMLDASKKLILVTGHRRESFGGG-FERICQA 253 (396)
T ss_dssp HHTTCCGGGEEECCCHHHHHHHHHH-------HHHHHCHHHHHHHHHTCTTCCTTSEEEEEECSCBCCCTTH-HHHHHHH
T ss_pred HHcCCCcCcEEEECCcHHHHHHHhh-------hhcccchhhHHHHHHHhCccCCCCCEEEEEECCcccchhH-HHHHHHH
Confidence 22 122 358888843322110000 00000 012222222 013467777765322222222 4556666
Q ss_pred HhhC-----CCcEEEEEcCCCCCCCCCCCCCchHHHHH--hcCCceeeeccC---HHHHhCcCCCCccccccChhHHHHH
Q 011848 308 LVHS-----KKSFLWVIRPDLISGKDGENQIPEELLEA--TKERGCIAGWVP---QEEVLAHSAVGGFLTHCGWNSTLES 377 (476)
Q Consensus 308 l~~~-----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~nv~~~~~vp---~~~ll~~~~~~~~I~HgG~gs~~ea 377 (476)
+..+ +.++++..+.+ ..+.+.+.+. ..+|+.+.++++ ...+++.+++ +|+-+| |.+.||
T Consensus 254 ~~~l~~~~~~~~~v~~~g~~--------~~~~~~l~~~~~~~~~v~~~~~lg~~~~~~l~~~ad~--vv~~SG-g~~~EA 322 (396)
T 3dzc_A 254 LITTAEQHPECQILYPVHLN--------PNVREPVNKLLKGVSNIVLIEPQQYLPFVYLMDRAHI--ILTDSG-GIQEEA 322 (396)
T ss_dssp HHHHHHHCTTEEEEEECCBC--------HHHHHHHHHHTTTCTTEEEECCCCHHHHHHHHHHCSE--EEESCS-GGGTTG
T ss_pred HHHHHHhCCCceEEEEeCCC--------hHHHHHHHHHHcCCCCEEEeCCCCHHHHHHHHHhcCE--EEECCc-cHHHHH
Confidence 5543 45666655311 0111222221 235888877775 3568889997 999887 666899
Q ss_pred HHhCCceeccccccchhhhhHhhhcceeeeEEeccccCHHHHHHHHHHHHhHhHHHHHHHHHH
Q 011848 378 IVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMVERKEEFMESADR 440 (476)
Q Consensus 378 l~~GvP~l~~P~~~DQ~~na~r~~e~~G~g~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~a~~ 440 (476)
.++|+|+|+.....++++ .+ + .|.++.+.. ++++|.+++.++++| +..+++..+
T Consensus 323 ~a~G~PvV~~~~~~~~~e---~v-~-~G~~~lv~~--d~~~l~~ai~~ll~d--~~~~~~m~~ 376 (396)
T 3dzc_A 323 PSLGKPVLVMRETTERPE---AV-A-AGTVKLVGT--NQQQICDALSLLLTD--PQAYQAMSQ 376 (396)
T ss_dssp GGGTCCEEECCSSCSCHH---HH-H-HTSEEECTT--CHHHHHHHHHHHHHC--HHHHHHHHT
T ss_pred HHcCCCEEEccCCCcchH---HH-H-cCceEEcCC--CHHHHHHHHHHHHcC--HHHHHHHhh
Confidence 999999999865555532 23 3 587766543 699999999999987 666554443
No 27
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.40 E-value=2.7e-10 Score=111.62 Aligned_cols=323 Identities=12% Similarity=0.080 Sum_probs=174.0
Q ss_pred CCccEEEEEcC--C--CccCHHHHHHHHHHHHhCCCEEEEEeCccchhhHhhcccccccccccCCCeeEEEcCCCCCCCC
Q 011848 4 QDHVHVAILPL--P--AVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDH 79 (476)
Q Consensus 4 ~~~~~il~~~~--~--~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (476)
|+||||++++. + ..|.-.-+..|++.| +||+|++++............. ..++.+..++.....
T Consensus 2 ~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~-- 69 (394)
T 3okp_A 2 SASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAYDK--------TLDYEVIRWPRSVML-- 69 (394)
T ss_dssp --CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHHHT--------TCSSEEEEESSSSCC--
T ss_pred CCCceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhhcc--------ccceEEEEccccccc--
Confidence 34789999985 3 467888899999999 7999999998654331111100 224666666531110
Q ss_pred CCCCCChHHHHHHHHhhCcHHHHHHHHcCCCCceEEEecCCcc--cHHHHHHHhCCceEE-EecchhhHHHHHhhhhhhh
Q 011848 80 PRTPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMS--RAIDAAREVGVSIIY-FRTISACAFWSFHCIPDII 156 (476)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~D~Ii~D~~~~--~~~~~A~~lgiP~v~-~~~~~~~~~~~~~~~~~~~ 156 (476)
... .....+.+++++. +||+|++..... ....++..+++|.++ ........ .
T Consensus 70 ----~~~---------~~~~~l~~~~~~~--~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~-~--------- 124 (394)
T 3okp_A 70 ----PTP---------TTAHAMAEIIRER--EIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVG-W--------- 124 (394)
T ss_dssp ----SCH---------HHHHHHHHHHHHT--TCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHHH-H---------
T ss_pred ----cch---------hhHHHHHHHHHhc--CCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchhh-h---------
Confidence 111 1123456777776 999999764433 456668889998444 32221000 0
Q ss_pred hcCCCCCCCCcccCccccccCCCCCCCCCCCCCCcccCCCCCChHHHHHHHHhhhhccCCEEEEcCccccchHHHHHHHh
Q 011848 157 DAGELPIKGTEDMDRLITTVPGMEGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRN 236 (476)
Q Consensus 157 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~ 236 (476)
. .........+. ....+|.+++.|....+.- .....
T Consensus 125 --------------------~--------------------~~~~~~~~~~~--~~~~~d~ii~~s~~~~~~~-~~~~~- 160 (394)
T 3okp_A 125 --------------------S--------------------MLPGSRQSLRK--IGTEVDVLTYISQYTLRRF-KSAFG- 160 (394)
T ss_dssp --------------------T--------------------TSHHHHHHHHH--HHHHCSEEEESCHHHHHHH-HHHHC-
T ss_pred --------------------h--------------------hcchhhHHHHH--HHHhCCEEEEcCHHHHHHH-HHhcC-
Confidence 0 00001111111 1256788888875432211 11000
Q ss_pred cCCCCeeeeccccCcCccCCCccccCCCCcccccchhhhhhhcCCCCceEEEEecccc-cCCHHHHHHHHHHHhh--CCC
Q 011848 237 HSCPNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIA-VMSRDQLIEFYYGLVH--SKK 313 (476)
Q Consensus 237 ~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~-~~~~~~~~~~~~al~~--~~~ 313 (476)
...++..+..-.....-.. ........+.+-+. ..++..+++..|+.. ....+.+...+..+.+ .+.
T Consensus 161 -~~~~~~vi~ngv~~~~~~~--------~~~~~~~~~~~~~~-~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~ 230 (394)
T 3okp_A 161 -SHPTFEHLPSGVDVKRFTP--------ATPEDKSATRKKLG-FTDTTPVIACNSRLVPRKGQDSLIKAMPQVIAARPDA 230 (394)
T ss_dssp -SSSEEEECCCCBCTTTSCC--------CCHHHHHHHHHHTT-CCTTCCEEEEESCSCGGGCHHHHHHHHHHHHHHSTTC
T ss_pred -CCCCeEEecCCcCHHHcCC--------CCchhhHHHHHhcC-CCcCceEEEEEeccccccCHHHHHHHHHHHHhhCCCe
Confidence 1134555543221111000 00011123333333 234446778888864 2233333333333332 245
Q ss_pred cEEEEEcCCCCCCCCCCCCCchHHHH---HhcCCceeeeccCHHH---HhCcCCCCcccc-----------ccChhHHHH
Q 011848 314 SFLWVIRPDLISGKDGENQIPEELLE---ATKERGCIAGWVPQEE---VLAHSAVGGFLT-----------HCGWNSTLE 376 (476)
Q Consensus 314 ~~i~~~~~~~~~~~~~~~~~~~~~~~---~~~~nv~~~~~vp~~~---ll~~~~~~~~I~-----------HgG~gs~~e 376 (476)
++++...+ ...+.+.+ ...+++.+.+|+|+.+ ++..+++ +|. -|..+++.|
T Consensus 231 ~l~i~G~g----------~~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~ps~~~~~~~~~e~~~~~~~E 298 (394)
T 3okp_A 231 QLLIVGSG----------RYESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADI--FAMPARTRGGGLDVEGLGIVYLE 298 (394)
T ss_dssp EEEEECCC----------TTHHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCSE--EEECCCCBGGGTBCCSSCHHHHH
T ss_pred EEEEEcCc----------hHHHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCCE--EEecCccccccccccccCcHHHH
Confidence 65554321 11222221 2357899999998644 7788887 665 566779999
Q ss_pred HHHhCCceeccccccchhhhhHhhhcceeeeEEeccccCHHHHHHHHHHHHhHhHHHHHHHH
Q 011848 377 SIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMVERKEEFMESA 438 (476)
Q Consensus 377 al~~GvP~l~~P~~~DQ~~na~r~~e~~G~g~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~a 438 (476)
|+++|+|+|+.+.. .....+ +. |.|..++ .-+.+++.++|.++++| +..+++.
T Consensus 299 a~a~G~PvI~~~~~----~~~e~i-~~-~~g~~~~-~~d~~~l~~~i~~l~~~--~~~~~~~ 351 (394)
T 3okp_A 299 AQACGVPVIAGTSG----GAPETV-TP-ATGLVVE-GSDVDKLSELLIELLDD--PIRRAAM 351 (394)
T ss_dssp HHHTTCCEEECSST----TGGGGC-CT-TTEEECC-TTCHHHHHHHHHHHHTC--HHHHHHH
T ss_pred HHHcCCCEEEeCCC----ChHHHH-hc-CCceEeC-CCCHHHHHHHHHHHHhC--HHHHHHH
Confidence 99999999997643 333445 33 4676663 35799999999999986 5544433
No 28
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.38 E-value=2e-10 Score=114.48 Aligned_cols=377 Identities=15% Similarity=0.096 Sum_probs=184.4
Q ss_pred CCccEEEEEcC---C--------CccCHHHHHHHHHHHHhCCCEEEEEeCccchhhHhhcccccccccccCCCeeEEEcC
Q 011848 4 QDHVHVAILPL---P--------AVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLT 72 (476)
Q Consensus 4 ~~~~~il~~~~---~--------~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (476)
.+||||++++. | ..|+-.....|++.|.++||+|++++.......-... .. ..++.++.++
T Consensus 18 ~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~-----~~---~~~v~v~~~~ 89 (438)
T 3c48_A 18 GSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIV-----RV---AENLRVINIA 89 (438)
T ss_dssp -CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCSEE-----EE---ETTEEEEEEC
T ss_pred cchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCcccc-----cc---cCCeEEEEec
Confidence 46899999995 2 3678889999999999999999999975421110000 00 2356666665
Q ss_pred CCCCCCCCCCCCChHHHHHHHHhhCcHHHHHH-HHcCCCCceEEEecCCcc--cHHHHHHHhCCceEEEecchhhHHHHH
Q 011848 73 DGLPRDHPRTPDKFPELVDSLNCATPPLLKEM-VSDSKSPVNCIITDGYMS--RAIDAAREVGVSIIYFRTISACAFWSF 149 (476)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-l~~~~~~~D~Ii~D~~~~--~~~~~A~~lgiP~v~~~~~~~~~~~~~ 149 (476)
....... ........+..+. ..+.+. ++.. .+||+|++..... .+..++..+++|+|...........
T Consensus 90 ~~~~~~~--~~~~~~~~~~~~~----~~~~~~~~~~~-~~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~-- 160 (438)
T 3c48_A 90 AGPYEGL--SKEELPTQLAAFT----GGMLSFTRREK-VTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAAVKN-- 160 (438)
T ss_dssp CSCSSSC--CGGGGGGGHHHHH----HHHHHHHHHHT-CCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSSCHHHHS--
T ss_pred CCCcccc--chhHHHHHHHHHH----HHHHHHHHhcc-CCCCEEEeCCccHHHHHHHHHHHcCCCEEEEecCCccccc--
Confidence 3211110 0011111111111 112222 4432 2599999875322 3455778889999987554211000
Q ss_pred hhhhhhhhcCCCCCCCCcccCccccccCCCCCCCCCCCCCCcccCCCCCChHHHHHHHHhhhhccCCEEEEcCccccchH
Q 011848 150 HCIPDIIDAGELPIKGTEDMDRLITTVPGMEGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGP 229 (476)
Q Consensus 150 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~ 229 (476)
.. +..... ......... .......+|.+++.+....+.-
T Consensus 161 ---------~~----------------------~~~~~~---------~~~~~~~~~-~~~~~~~~d~ii~~s~~~~~~~ 199 (438)
T 3c48_A 161 ---------SY----------------------RDDSDT---------PESEARRIC-EQQLVDNADVLAVNTQEEMQDL 199 (438)
T ss_dssp ---------CC--------------------------CC---------HHHHHHHHH-HHHHHHHCSEEEESSHHHHHHH
T ss_pred ---------cc----------------------ccccCC---------cchHHHHHH-HHHHHhcCCEEEEcCHHHHHHH
Confidence 00 000000 000000000 0112356888888885432221
Q ss_pred HHHHHHhcCC-CCeeeeccccCcCccCCCccccCCCCcccccchhhhhhhcCCCCceEEEEeccccc-CCHHHHHHHHHH
Q 011848 230 ILSQIRNHSC-PNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAV-MSRDQLIEFYYG 307 (476)
Q Consensus 230 ~~~~~~~~~~-~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~-~~~~~~~~~~~a 307 (476)
.... + .. .++.++..-.....-.. ........+.+-+. ......+++..|+... ...+.+...+..
T Consensus 200 -~~~~-g-~~~~k~~vi~ngvd~~~~~~--------~~~~~~~~~r~~~~-~~~~~~~i~~~G~~~~~Kg~~~li~a~~~ 267 (438)
T 3c48_A 200 -MHHY-D-ADPDRISVVSPGADVELYSP--------GNDRATERSRRELG-IPLHTKVVAFVGRLQPFKGPQVLIKAVAA 267 (438)
T ss_dssp -HHHH-C-CCGGGEEECCCCCCTTTSCC--------C----CHHHHHHTT-CCSSSEEEEEESCBSGGGCHHHHHHHHHH
T ss_pred -HHHh-C-CChhheEEecCCccccccCC--------cccchhhhhHHhcC-CCCCCcEEEEEeeecccCCHHHHHHHHHH
Confidence 1100 1 11 24555543221111000 00000011222222 1234556777888752 233333333333
Q ss_pred HhhC----CCcEEEEEcCCCCCCCCCCCCCchHHH---HH--hcCCceeeeccCH---HHHhCcCCCCccccc----cCh
Q 011848 308 LVHS----KKSFLWVIRPDLISGKDGENQIPEELL---EA--TKERGCIAGWVPQ---EEVLAHSAVGGFLTH----CGW 371 (476)
Q Consensus 308 l~~~----~~~~i~~~~~~~~~~~~~~~~~~~~~~---~~--~~~nv~~~~~vp~---~~ll~~~~~~~~I~H----gG~ 371 (476)
+.+. +.+++++.... .. | ...+.+. ++ ..+++.+.+++|+ ..++..+++ +|.- |..
T Consensus 268 l~~~~p~~~~~l~i~G~~~-~~--g---~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~ 339 (438)
T 3c48_A 268 LFDRDPDRNLRVIICGGPS-GP--N---ATPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADI--VAVPSFNESFG 339 (438)
T ss_dssp HHHHCTTCSEEEEEECCBC------------CHHHHHHHHTTCTTTEEEECCCCHHHHHHHHHHCSE--EEECCSCCSSC
T ss_pred HHhhCCCcceEEEEEeCCC-CC--C---cHHHHHHHHHHHcCCCCcEEEcCCCChHHHHHHHHhCCE--EEECccccCCc
Confidence 3221 23444433200 00 0 1112222 11 2468999999986 457888997 6543 335
Q ss_pred hHHHHHHHhCCceeccccccchhhhhHhhhcceeeeEEeccccCHHHHHHHHHHHHhH--hHHHHHHHHHHHHHHHHHHH
Q 011848 372 NSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMVE--RKEEFMESADRMANLAKKSV 449 (476)
Q Consensus 372 gs~~eal~~GvP~l~~P~~~DQ~~na~r~~e~~G~g~~~~~~~~~~~l~~ai~~~l~~--~~~~~~~~a~~l~~~~~~~~ 449 (476)
.++.||+++|+|+|+.+. ......+ +..+.|..++ .-+.+++.++|.++++| ....+.+++++..+.+.-.
T Consensus 340 ~~~~Eama~G~PvI~~~~----~~~~e~i-~~~~~g~~~~-~~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~s~~- 412 (438)
T 3c48_A 340 LVAMEAQASGTPVIAARV----GGLPIAV-AEGETGLLVD-GHSPHAWADALATLLDDDETRIRMGEDAVEHARTFSWA- 412 (438)
T ss_dssp HHHHHHHHTTCCEEEESC----TTHHHHS-CBTTTEEEES-SCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH-
T ss_pred hHHHHHHHcCCCEEecCC----CChhHHh-hCCCcEEECC-CCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhCCHH-
Confidence 689999999999998753 3344455 4445677764 34889999999999986 1123445555555553221
Q ss_pred hcCCChHHHHHHHHHHHHHh
Q 011848 450 NKGGSSYCNLDRLVNDIKMM 469 (476)
Q Consensus 450 ~~~g~~~~~~~~~i~~l~~~ 469 (476)
...+.+.++++++...
T Consensus 413 ----~~~~~~~~~~~~~~~~ 428 (438)
T 3c48_A 413 ----ATAAQLSSLYNDAIAN 428 (438)
T ss_dssp ----HHHHHHHHHHHHHHHT
T ss_pred ----HHHHHHHHHHHHHhhh
Confidence 1133445555555444
No 29
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.34 E-value=1.1e-11 Score=121.96 Aligned_cols=160 Identities=13% Similarity=0.115 Sum_probs=95.7
Q ss_pred CCceEEEEecccccCCHHHHHHHHHHHhh-----CCCcEEEEEcCCCCCCCCCCCCCchHHHHH--hcCCceeeeccCH-
Q 011848 282 KQSVIYVSFGSIAVMSRDQLIEFYYGLVH-----SKKSFLWVIRPDLISGKDGENQIPEELLEA--TKERGCIAGWVPQ- 353 (476)
Q Consensus 282 ~~~~V~vs~Gs~~~~~~~~~~~~~~al~~-----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~nv~~~~~vp~- 353 (476)
+++.++++.|....... .+..+++++.. .+.++++..+.+ ..+.+.+.+. ..+|+.+.+++++
T Consensus 223 ~~~~vlv~~~r~~~~~~-~l~~ll~a~~~l~~~~~~~~~v~~~~~~--------~~~~~~l~~~~~~~~~v~l~~~l~~~ 293 (403)
T 3ot5_A 223 DNRLILMTAHRRENLGE-PMQGMFEAVREIVESREDTELVYPMHLN--------PAVREKAMAILGGHERIHLIEPLDAI 293 (403)
T ss_dssp TCEEEEECCCCHHHHTT-HHHHHHHHHHHHHHHCTTEEEEEECCSC--------HHHHHHHHHHHTTCTTEEEECCCCHH
T ss_pred CCCEEEEEeCcccccCc-HHHHHHHHHHHHHHhCCCceEEEecCCC--------HHHHHHHHHHhCCCCCEEEeCCCCHH
Confidence 56777777664322221 23445555443 244666665321 0111122211 2368888888863
Q ss_pred --HHHhCcCCCCccccccChhHHHHHHHhCCceeccccccchhhhhHhhhcceeeeEEeccccCHHHHHHHHHHHHhHhH
Q 011848 354 --EEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMVERK 431 (476)
Q Consensus 354 --~~ll~~~~~~~~I~HgG~gs~~eal~~GvP~l~~P~~~DQ~~na~r~~e~~G~g~~~~~~~~~~~l~~ai~~~l~~~~ 431 (476)
..+++.+++ +|+-.|..+ .||.++|+|+|++|...++++. + + .|.|+.+.. ++++|.+++.++++|
T Consensus 294 ~~~~l~~~ad~--vv~~SGg~~-~EA~a~g~PvV~~~~~~~~~e~---v-~-~g~~~lv~~--d~~~l~~ai~~ll~~-- 361 (403)
T 3ot5_A 294 DFHNFLRKSYL--VFTDSGGVQ-EEAPGMGVPVLVLRDTTERPEG---I-E-AGTLKLIGT--NKENLIKEALDLLDN-- 361 (403)
T ss_dssp HHHHHHHHEEE--EEECCHHHH-HHGGGTTCCEEECCSSCSCHHH---H-H-HTSEEECCS--CHHHHHHHHHHHHHC--
T ss_pred HHHHHHHhcCE--EEECCccHH-HHHHHhCCCEEEecCCCcchhh---e-e-CCcEEEcCC--CHHHHHHHHHHHHcC--
Confidence 458889997 898875333 7999999999999776666642 3 3 587777642 899999999999987
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 011848 432 EEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIK 467 (476)
Q Consensus 432 ~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~i~~l~ 467 (476)
+..+++..+-+..+ ..++++++. .+.|+++.
T Consensus 362 ~~~~~~m~~~~~~~----g~~~aa~rI-~~~l~~~l 392 (403)
T 3ot5_A 362 KESHDKMAQAANPY----GDGFAANRI-LAAIKSHF 392 (403)
T ss_dssp HHHHHHHHHSCCTT----CCSCHHHHH-HHHHHHHH
T ss_pred HHHHHHHHhhcCcc----cCCcHHHHH-HHHHHHHh
Confidence 66665544332222 334554444 44444433
No 30
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.30 E-value=8.7e-10 Score=109.59 Aligned_cols=161 Identities=13% Similarity=0.058 Sum_probs=92.0
Q ss_pred eEEEEecccc--cCCHHHHHHHHHHHhh----CCCcEEEEEcCCCCCCCCCCC--CCchHHHHHhcCCceeeeccCHHH-
Q 011848 285 VIYVSFGSIA--VMSRDQLIEFYYGLVH----SKKSFLWVIRPDLISGKDGEN--QIPEELLEATKERGCIAGWVPQEE- 355 (476)
Q Consensus 285 ~V~vs~Gs~~--~~~~~~~~~~~~al~~----~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~nv~~~~~vp~~~- 355 (476)
.+++..|+.. ....+.+...+..+.. .+.++++... |... ..-..+.++.++++.+.+|+|+.+
T Consensus 252 ~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~G~-------g~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~ 324 (439)
T 3fro_A 252 VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGK-------GDPELEGWARSLEEKHGNVKVITEMLSREFV 324 (439)
T ss_dssp EEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEEEEECC-------CCHHHHHHHHHHHHHCTTEEEECSCCCHHHH
T ss_pred cEEEEEcccccccccHHHHHHHHHHHHhcccCCCeEEEEEcC-------CChhHHHHHHHHHhhcCCEEEEcCCCCHHHH
Confidence 7778888875 3344444444444444 2345444432 1100 000111223344445669899754
Q ss_pred --HhCcCCCCcccc----ccChhHHHHHHHhCCceeccccccchhhhhHhhhcceeeeEEeccccCHHHHHHHHHHHHh-
Q 011848 356 --VLAHSAVGGFLT----HCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMV- 428 (476)
Q Consensus 356 --ll~~~~~~~~I~----HgG~gs~~eal~~GvP~l~~P~~~DQ~~na~r~~e~~G~g~~~~~~~~~~~l~~ai~~~l~- 428 (476)
++..+++ +|. -|-..++.||+++|+|+|+... ......+ +. |.|..++ .-+.+++.++|.++++
T Consensus 325 ~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~Pvi~s~~----~~~~e~~-~~-~~g~~~~-~~d~~~la~~i~~ll~~ 395 (439)
T 3fro_A 325 RELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDII-TN-ETGILVK-AGDPGELANAILKALEL 395 (439)
T ss_dssp HHHHTTCSE--EEECBSCCSSCHHHHHHHHTTCEEEEESS----THHHHHC-CT-TTCEEEC-TTCHHHHHHHHHHHHHH
T ss_pred HHHHHHCCE--EEeCCCCCCccHHHHHHHHCCCCeEEcCC----CCcceeE-Ec-CceEEeC-CCCHHHHHHHHHHHHhc
Confidence 6888887 552 2445799999999999998643 3444445 33 6777774 4589999999999998
Q ss_pred HhHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 011848 429 ERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIK 467 (476)
Q Consensus 429 ~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~i~~l~ 467 (476)
+ +..+++..+-+.+..+ .-+-...++++++-+.
T Consensus 396 ~--~~~~~~~~~~~~~~~~----~~s~~~~~~~~~~~~~ 428 (439)
T 3fro_A 396 S--RSDLSKFRENCKKRAM----SFSWEKSAERYVKAYT 428 (439)
T ss_dssp T--TTTTHHHHHHHHHHHH----TSCHHHHHHHHHHHHH
T ss_pred C--HHHHHHHHHHHHHHHh----hCcHHHHHHHHHHHHH
Confidence 5 4444333333333222 3343445555555443
No 31
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.26 E-value=5.7e-11 Score=116.23 Aligned_cols=135 Identities=13% Similarity=0.116 Sum_probs=85.8
Q ss_pred CCceEEEEecccccCCHHHHHHHHHHHhhC-----CCcEEEEEcCCCCCCCCCCCCCchHHHHHh--cCCceeeeccCH-
Q 011848 282 KQSVIYVSFGSIAVMSRDQLIEFYYGLVHS-----KKSFLWVIRPDLISGKDGENQIPEELLEAT--KERGCIAGWVPQ- 353 (476)
Q Consensus 282 ~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~--~~nv~~~~~vp~- 353 (476)
+++.|+++.|....... .+..+++++... +.++++..+.+ ....+.+.+.. .+|+.+.+++++
T Consensus 204 ~~~~vl~~~gr~~~~~k-g~~~li~a~~~l~~~~~~~~l~i~~g~~--------~~~~~~l~~~~~~~~~v~~~g~~~~~ 274 (384)
T 1vgv_A 204 DKKMILVTGHRRESFGR-GFEEICHALADIATTHQDIQIVYPVHLN--------PNVREPVNRILGHVKNVILIDPQEYL 274 (384)
T ss_dssp TSEEEEEECCCBSSCCH-HHHHHHHHHHHHHHHCTTEEEEEECCBC--------HHHHHHHHHHHTTCTTEEEECCCCHH
T ss_pred CCCEEEEEeCCccccch-HHHHHHHHHHHHHhhCCCeEEEEEcCCC--------HHHHHHHHHHhhcCCCEEEeCCCCHH
Confidence 46678888887653322 234444444432 34555543211 01112222211 268888776664
Q ss_pred --HHHhCcCCCCccccccChhHHHHHHHhCCceeccccccchhhhhHhhhcceeeeEEeccccCHHHHHHHHHHHHhHhH
Q 011848 354 --EEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMVERK 431 (476)
Q Consensus 354 --~~ll~~~~~~~~I~HgG~gs~~eal~~GvP~l~~P~~~DQ~~na~r~~e~~G~g~~~~~~~~~~~l~~ai~~~l~~~~ 431 (476)
.+++..+++ ||+.+| +.+.||+++|+|+|+.+...+..+ +.+ .|.|..++. ++++|.++|.++++|
T Consensus 275 ~~~~~~~~ad~--~v~~Sg-~~~lEA~a~G~PvI~~~~~~~~~e----~v~-~g~g~lv~~--d~~~la~~i~~ll~d-- 342 (384)
T 1vgv_A 275 PFVWLMNHAWL--ILTDSG-GIQEEAPSLGKPVLVMRDTTERPE----AVT-AGTVRLVGT--DKQRIVEEVTRLLKD-- 342 (384)
T ss_dssp HHHHHHHHCSE--EEESSS-TGGGTGGGGTCCEEEESSCCSCHH----HHH-HTSEEEECS--SHHHHHHHHHHHHHC--
T ss_pred HHHHHHHhCcE--EEECCc-chHHHHHHcCCCEEEccCCCCcch----hhh-CCceEEeCC--CHHHHHHHHHHHHhC--
Confidence 567899998 888875 448899999999999987444332 333 478887754 899999999999987
Q ss_pred HHHHHH
Q 011848 432 EEFMES 437 (476)
Q Consensus 432 ~~~~~~ 437 (476)
+..+++
T Consensus 343 ~~~~~~ 348 (384)
T 1vgv_A 343 ENEYQA 348 (384)
T ss_dssp HHHHHH
T ss_pred hHHHhh
Confidence 655443
No 32
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=99.23 E-value=2.9e-10 Score=109.37 Aligned_cols=125 Identities=14% Similarity=0.104 Sum_probs=81.6
Q ss_pred EEEEecccccCCHHHHHHHHHHHhhCCCcEEEEEcCCCCCCCCCCCCCchHHHHHhcCCceeeeccCHH---HHhCcCCC
Q 011848 286 IYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQE---EVLAHSAV 362 (476)
Q Consensus 286 V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~vp~~---~ll~~~~~ 362 (476)
+++..|+.. .......++++++..+.++++... |.....-..+.+..++|+.+.+|+++. +++..+++
T Consensus 164 ~i~~vG~~~--~~Kg~~~li~a~~~~~~~l~i~G~-------g~~~~~l~~~~~~~~~~v~~~g~~~~~~l~~~~~~adv 234 (342)
T 2iuy_A 164 FLLFMGRVS--PHKGALEAAAFAHACGRRLVLAGP-------AWEPEYFDEITRRYGSTVEPIGEVGGERRLDLLASAHA 234 (342)
T ss_dssp CEEEESCCC--GGGTHHHHHHHHHHHTCCEEEESC-------CCCHHHHHHHHHHHTTTEEECCCCCHHHHHHHHHHCSE
T ss_pred EEEEEeccc--cccCHHHHHHHHHhcCcEEEEEeC-------cccHHHHHHHHHHhCCCEEEeccCCHHHHHHHHHhCCE
Confidence 456677765 223355666666666777666543 111111122223345899999999975 68888998
Q ss_pred Ccccc--c------------cChhHHHHHHHhCCceeccccccchhhhhHhhhcc--eeeeEEeccccCHHHHHHHHHHH
Q 011848 363 GGFLT--H------------CGWNSTLESIVAGMPMICWPSFADQQINSRFVGEV--WKLGLDIKDLCDRNIVEKAVNDL 426 (476)
Q Consensus 363 ~~~I~--H------------gG~gs~~eal~~GvP~l~~P~~~DQ~~na~r~~e~--~G~g~~~~~~~~~~~l~~ai~~~ 426 (476)
+|. . |-.+++.||+++|+|+|+.... .+...+ +. -+.|..++ . +.+++.++|.++
T Consensus 235 --~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~----~~~e~~-~~~~~~~g~~~~-~-d~~~l~~~i~~l 305 (342)
T 2iuy_A 235 --VLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNG----CLAEIV-PSVGEVVGYGTD-F-APDEARRTLAGL 305 (342)
T ss_dssp --EEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTT----THHHHG-GGGEEECCSSSC-C-CHHHHHHHHHTS
T ss_pred --EEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCC----ChHHHh-cccCCCceEEcC-C-CHHHHHHHHHHH
Confidence 552 2 3346899999999999998653 344455 44 35666663 4 999999999999
Q ss_pred Hh
Q 011848 427 MV 428 (476)
Q Consensus 427 l~ 428 (476)
++
T Consensus 306 ~~ 307 (342)
T 2iuy_A 306 PA 307 (342)
T ss_dssp CC
T ss_pred HH
Confidence 86
No 33
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.20 E-value=1.2e-09 Score=107.38 Aligned_cols=132 Identities=15% Similarity=0.134 Sum_probs=82.5
Q ss_pred eEEEEeccc-c-cCCHHHHHHHHHHHhhC--CCcEEEEEcCCCCCCCCCCCCCchHHHHH---hcCCceeeeccCHH---
Q 011848 285 VIYVSFGSI-A-VMSRDQLIEFYYGLVHS--KKSFLWVIRPDLISGKDGENQIPEELLEA---TKERGCIAGWVPQE--- 354 (476)
Q Consensus 285 ~V~vs~Gs~-~-~~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~---~~~nv~~~~~vp~~--- 354 (476)
.+++..|+. . ....+.+...+..+.+. +.++++... +. . +.+.+. ..+|+.+.+++++.
T Consensus 209 ~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~-------~~---~-~~l~~~~~~~~~~v~~~g~~~~~~~~ 277 (406)
T 2gek_A 209 RTVLFLGRYDEPRKGMAVLLAALPKLVARFPDVEILIVGR-------GD---E-DELREQAGDLAGHLRFLGQVDDATKA 277 (406)
T ss_dssp CEEEEESCTTSGGGCHHHHHHHHHHHHTTSTTCEEEEESC-------SC---H-HHHHHHTGGGGGGEEECCSCCHHHHH
T ss_pred eEEEEEeeeCccccCHHHHHHHHHHHHHHCCCeEEEEEcC-------Cc---H-HHHHHHHHhccCcEEEEecCCHHHHH
Confidence 467778877 4 23333333333333332 445544432 11 1 333321 25789999999974
Q ss_pred HHhCcCCCCcccc----ccCh-hHHHHHHHhCCceeccccccchhhhhHhhhcceeeeEEeccccCHHHHHHHHHHHHhH
Q 011848 355 EVLAHSAVGGFLT----HCGW-NSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMVE 429 (476)
Q Consensus 355 ~ll~~~~~~~~I~----HgG~-gs~~eal~~GvP~l~~P~~~DQ~~na~r~~e~~G~g~~~~~~~~~~~l~~ai~~~l~~ 429 (476)
.++..+++ +|. +.|. +++.||+++|+|+|+.+. ......+ +..+.|..++ .-+.+++.++|.+++++
T Consensus 278 ~~~~~adv--~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~i-~~~~~g~~~~-~~d~~~l~~~i~~l~~~ 349 (406)
T 2gek_A 278 SAMRSADV--YCAPHLGGESFGIVLVEAMAAGTAVVASDL----DAFRRVL-ADGDAGRLVP-VDDADGMAAALIGILED 349 (406)
T ss_dssp HHHHHSSE--EEECCCSCCSSCHHHHHHHHHTCEEEECCC----HHHHHHH-TTTTSSEECC-TTCHHHHHHHHHHHHHC
T ss_pred HHHHHCCE--EEecCCCCCCCchHHHHHHHcCCCEEEecC----CcHHHHh-cCCCceEEeC-CCCHHHHHHHHHHHHcC
Confidence 68889998 553 3343 489999999999998765 3444555 3445676663 34789999999999986
Q ss_pred hHHHHHHH
Q 011848 430 RKEEFMES 437 (476)
Q Consensus 430 ~~~~~~~~ 437 (476)
+..+++
T Consensus 350 --~~~~~~ 355 (406)
T 2gek_A 350 --DQLRAG 355 (406)
T ss_dssp --HHHHHH
T ss_pred --HHHHHH
Confidence 554433
No 34
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.18 E-value=2.7e-09 Score=103.89 Aligned_cols=135 Identities=11% Similarity=0.121 Sum_probs=83.4
Q ss_pred CCceEEEEecccccCCHHHHHHHHHHHhhC-----CCcEEEEEcCCCCCCCCCCCCCchHHHHHhc--CCceeeeccCH-
Q 011848 282 KQSVIYVSFGSIAVMSRDQLIEFYYGLVHS-----KKSFLWVIRPDLISGKDGENQIPEELLEATK--ERGCIAGWVPQ- 353 (476)
Q Consensus 282 ~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~-----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~--~nv~~~~~vp~- 353 (476)
+++.|+++.|...... ..+..+++++... +.++++ +. +....+.+.+.+... +|+.+.+++++
T Consensus 204 ~~~~vl~~~gr~~~~~-K~~~~li~a~~~l~~~~~~~~~i~--~~------g~~~~~~~~~~~~~~~~~~v~~~g~~~~~ 274 (375)
T 3beo_A 204 NNRLVLMTAHRRENLG-EPMRNMFRAIKRLVDKHEDVQVVY--PV------HMNPVVRETANDILGDYGRIHLIEPLDVI 274 (375)
T ss_dssp TSEEEEEECCCGGGTT-HHHHHHHHHHHHHHHHCTTEEEEE--EC------CSCHHHHHHHHHHHTTCTTEEEECCCCHH
T ss_pred CCCeEEEEecccccch-hHHHHHHHHHHHHHhhCCCeEEEE--eC------CCCHHHHHHHHHHhhccCCEEEeCCCCHH
Confidence 4566777888764322 2345555555432 344443 21 111111122222222 68888777765
Q ss_pred --HHHhCcCCCCccccccChhHHHHHHHhCCceeccccccchhhhhHhhhcceeeeEEeccccCHHHHHHHHHHHHhHhH
Q 011848 354 --EEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMVERK 431 (476)
Q Consensus 354 --~~ll~~~~~~~~I~HgG~gs~~eal~~GvP~l~~P~~~DQ~~na~r~~e~~G~g~~~~~~~~~~~l~~ai~~~l~~~~ 431 (476)
..++..+++ +|+.+| +.+.||+++|+|+|+........+ .+ + .|.|..++. +.++|.++|.++++|
T Consensus 275 ~~~~~~~~ad~--~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~~e---~v-~-~g~g~~v~~--d~~~la~~i~~ll~~-- 342 (375)
T 3beo_A 275 DFHNVAARSYL--MLTDSG-GVQEEAPSLGVPVLVLRDTTERPE---GI-E-AGTLKLAGT--DEETIFSLADELLSD-- 342 (375)
T ss_dssp HHHHHHHTCSE--EEECCH-HHHHHHHHHTCCEEECSSCCSCHH---HH-H-TTSEEECCS--CHHHHHHHHHHHHHC--
T ss_pred HHHHHHHhCcE--EEECCC-ChHHHHHhcCCCEEEecCCCCCce---ee-c-CCceEEcCC--CHHHHHHHHHHHHhC--
Confidence 457888997 888763 558899999999998854333322 24 3 478877753 899999999999987
Q ss_pred HHHHHH
Q 011848 432 EEFMES 437 (476)
Q Consensus 432 ~~~~~~ 437 (476)
+..+++
T Consensus 343 ~~~~~~ 348 (375)
T 3beo_A 343 KEAHDK 348 (375)
T ss_dssp HHHHHH
T ss_pred hHhHhh
Confidence 655544
No 35
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.17 E-value=2.2e-08 Score=101.50 Aligned_cols=85 Identities=14% Similarity=0.114 Sum_probs=60.5
Q ss_pred cCCceeeeccCHH---HHhCcC----CCCccccc----cChhHHHHHHHhCCceeccccccchhhhhHhhhcceeeeEEe
Q 011848 342 KERGCIAGWVPQE---EVLAHS----AVGGFLTH----CGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDI 410 (476)
Q Consensus 342 ~~nv~~~~~vp~~---~ll~~~----~~~~~I~H----gG~gs~~eal~~GvP~l~~P~~~DQ~~na~r~~e~~G~g~~~ 410 (476)
.++|.+.+++|+. .++..+ ++ +|.- |-..++.||+++|+|+|+... ......+ +....|..+
T Consensus 334 ~~~V~~~G~v~~~~~~~~~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~~----~g~~e~v-~~~~~g~l~ 406 (499)
T 2r60_A 334 RGKVSMFPLNSQQELAGCYAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTRN----GGPAEIL-DGGKYGVLV 406 (499)
T ss_dssp BTTEEEEECCSHHHHHHHHHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEESS----BHHHHHT-GGGTSSEEE
T ss_pred CceEEECCCCCHHHHHHHHHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEecC----CCHHHHh-cCCceEEEe
Confidence 4689999999864 477788 87 5532 334689999999999998753 2334444 343467666
Q ss_pred ccccCHHHHHHHHHHHHhHhHHHHHH
Q 011848 411 KDLCDRNIVEKAVNDLMVERKEEFME 436 (476)
Q Consensus 411 ~~~~~~~~l~~ai~~~l~~~~~~~~~ 436 (476)
+ .-+.+++.++|.++++| +..++
T Consensus 407 ~-~~d~~~la~~i~~ll~~--~~~~~ 429 (499)
T 2r60_A 407 D-PEDPEDIARGLLKAFES--EETWS 429 (499)
T ss_dssp C-TTCHHHHHHHHHHHHSC--HHHHH
T ss_pred C-CCCHHHHHHHHHHHHhC--HHHHH
Confidence 4 35889999999999986 54443
No 36
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.07 E-value=8.6e-07 Score=86.69 Aligned_cols=321 Identities=14% Similarity=0.101 Sum_probs=164.1
Q ss_pred cEEEEEcCCCc-cCHHHHHHHHHHHHhCCCEEEEEeCccchhhHhhcccccccccccCCCeeEEEcCCCCCCCCCCCCCC
Q 011848 7 VHVAILPLPAV-GHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRTPDK 85 (476)
Q Consensus 7 ~~il~~~~~~~-GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (476)
.++....+|.. |.-.-...|++.|+++||+|++++...... .... .+++.+..++..... ....
T Consensus 16 ~~~~~~~~p~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~-~~~~----------~~~i~~~~~~~~~~~----~~~~ 80 (394)
T 2jjm_A 16 LKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGLPFR-LNKV----------YPNIYFHEVTVNQYS----VFQY 80 (394)
T ss_dssp CEEEEECCC--CHHHHHHHHHHHHHHHTTCEEEEECSSCC-----CC----------CTTEEEECCCCC--------CCS
T ss_pred eeeehhcCCCCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCc-cccc----------CCceEEEeccccccc----cccc
Confidence 47888888754 566678899999999999999999754211 1111 335666555421000 0000
Q ss_pred hHHHHHHHHhhCcHHHHHHHHcCCCCceEEEecCCcc--cHHHHHHHh---CCceEEEecchhhHHHHHhhhhhhhhcCC
Q 011848 86 FPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMS--RAIDAAREV---GVSIIYFRTISACAFWSFHCIPDIIDAGE 160 (476)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~ll~~~~~~~D~Ii~D~~~~--~~~~~A~~l---giP~v~~~~~~~~~~~~~~~~~~~~~~~~ 160 (476)
....+. ....+.+++++. +||+|++..... ....++..+ ++|+|........ ..
T Consensus 81 ~~~~~~-----~~~~l~~~l~~~--~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~---------~~----- 139 (394)
T 2jjm_A 81 PPYDLA-----LASKMAEVAQRE--NLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDI---------TV----- 139 (394)
T ss_dssp CCHHHH-----HHHHHHHHHHHH--TCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHH---------HT-----
T ss_pred ccccHH-----HHHHHHHHHHHc--CCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCcc---------cc-----
Confidence 011111 123356667765 999999874432 223344433 5999886544210 00
Q ss_pred CCCCCCcccCccccccCCCCCCCCCCCCCCcccCCCCCChHHHHHHHHhhhhccCCEEEEcCccccchHHHHHHHhcC--
Q 011848 161 LPIKGTEDMDRLITTVPGMEGFLRCRDLPSFCRVNDPMDPHLLLFARETRLSAHADGLILNTFEDLEGPILSQIRNHS-- 238 (476)
Q Consensus 161 ~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~~~-- 238 (476)
.+... . .....+ .....+|.+++.+....+ ..+...
T Consensus 140 ----------------~~~~~-~------------------~~~~~~--~~~~~ad~ii~~s~~~~~-----~~~~~~~~ 177 (394)
T 2jjm_A 140 ----------------LGSDP-S------------------LNNLIR--FGIEQSDVVTAVSHSLIN-----ETHELVKP 177 (394)
T ss_dssp ----------------TTTCT-T------------------THHHHH--HHHHHSSEEEESCHHHHH-----HHHHHTCC
T ss_pred ----------------cCCCH-H------------------HHHHHH--HHHhhCCEEEECCHHHHH-----HHHHhhCC
Confidence 00000 0 000111 112567888888753222 222201
Q ss_pred CCCeeeeccccCcCccCCCccccCCCCcccccchhhhhhhcCCCCceEEEEecccc-cCCHHHHHHHHHHHhh-CCCcEE
Q 011848 239 CPNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIA-VMSRDQLIEFYYGLVH-SKKSFL 316 (476)
Q Consensus 239 ~~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~-~~~~~~~~~~~~al~~-~~~~~i 316 (476)
..++..+..-.....-.. .....+.+-+. ..++..+++..|+.. ....+.+...+..+.+ .+.+++
T Consensus 178 ~~~~~vi~ngv~~~~~~~-----------~~~~~~~~~~~-~~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~l~ 245 (394)
T 2jjm_A 178 NKDIQTVYNFIDERVYFK-----------RDMTQLKKEYG-ISESEKILIHISNFRKVKRVQDVVQAFAKIVTEVDAKLL 245 (394)
T ss_dssp SSCEEECCCCCCTTTCCC-----------CCCHHHHHHTT-CC---CEEEEECCCCGGGTHHHHHHHHHHHHHSSCCEEE
T ss_pred cccEEEecCCccHHhcCC-----------cchHHHHHHcC-CCCCCeEEEEeeccccccCHHHHHHHHHHHHhhCCCEEE
Confidence 134555543221111000 01112222222 113445667778775 2233333333333322 245554
Q ss_pred EEEcCCCCCCCCCCCCCchHHHHH-----hcCCceeeeccCH-HHHhCcCCCCccc----cccChhHHHHHHHhCCceec
Q 011848 317 WVIRPDLISGKDGENQIPEELLEA-----TKERGCIAGWVPQ-EEVLAHSAVGGFL----THCGWNSTLESIVAGMPMIC 386 (476)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~nv~~~~~vp~-~~ll~~~~~~~~I----~HgG~gs~~eal~~GvP~l~ 386 (476)
+... +. ..+.+.+. ..+|+.+.++..+ ..++..+++ +| .-|..+++.||+++|+|+|+
T Consensus 246 i~G~-------g~---~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~PvI~ 313 (394)
T 2jjm_A 246 LVGD-------GP---EFCTILQLVKNLHIEDRVLFLGKQDNVAELLAMSDL--MLLLSEKESFGLVLLEAMACGVPCIG 313 (394)
T ss_dssp EECC-------CT---THHHHHHHHHTTTCGGGBCCCBSCSCTHHHHHTCSE--EEECCSCCSCCHHHHHHHHTTCCEEE
T ss_pred EECC-------ch---HHHHHHHHHHHcCCCCeEEEeCchhhHHHHHHhCCE--EEeccccCCCchHHHHHHhcCCCEEE
Confidence 4432 11 11222221 2467888887654 568999997 77 55667899999999999998
Q ss_pred cccccchhhhhHhhhcceeeeEEeccccCHHHHHHHHHHHHhHhHHHHHHH
Q 011848 387 WPSFADQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMVERKEEFMES 437 (476)
Q Consensus 387 ~P~~~DQ~~na~r~~e~~G~g~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~ 437 (476)
.+.. .....+ +..+.|..++ .-+.+++.++|.++++| +..+++
T Consensus 314 ~~~~----~~~e~v-~~~~~g~~~~-~~d~~~la~~i~~l~~~--~~~~~~ 356 (394)
T 2jjm_A 314 TRVG----GIPEVI-QHGDTGYLCE-VGDTTGVADQAIQLLKD--EELHRN 356 (394)
T ss_dssp ECCT----TSTTTC-CBTTTEEEEC-TTCHHHHHHHHHHHHHC--HHHHHH
T ss_pred ecCC----ChHHHh-hcCCceEEeC-CCCHHHHHHHHHHHHcC--HHHHHH
Confidence 7643 233344 3335676664 34789999999999986 554443
No 37
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=99.06 E-value=9.2e-08 Score=94.38 Aligned_cols=85 Identities=15% Similarity=0.010 Sum_probs=62.2
Q ss_pred cCCceeeeccC---H---HHHhCcCCCCcccccc----ChhHHHHHHHhCCceeccccccchhhhhHhhhcceeeeEEec
Q 011848 342 KERGCIAGWVP---Q---EEVLAHSAVGGFLTHC----GWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIK 411 (476)
Q Consensus 342 ~~nv~~~~~vp---~---~~ll~~~~~~~~I~Hg----G~gs~~eal~~GvP~l~~P~~~DQ~~na~r~~e~~G~g~~~~ 411 (476)
.+++.+.+|++ + ..++..+++ +|.-. ...++.||+++|+|+|+.+. ..+...+ +..+.|..++
T Consensus 292 ~~~V~~~G~~~~~~~~~~~~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i-~~~~~g~l~~ 364 (416)
T 2x6q_A 292 DYDVKVLTNLIGVHAREVNAFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQI-VDGETGFLVR 364 (416)
T ss_dssp CTTEEEEEGGGTCCHHHHHHHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHC-CBTTTEEEES
T ss_pred CCcEEEecccCCCCHHHHHHHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhhe-ecCCCeEEEC
Confidence 46899988876 2 447888887 66443 56789999999999998764 3345555 3445777774
Q ss_pred cccCHHHHHHHHHHHHhHhHHHHHHHH
Q 011848 412 DLCDRNIVEKAVNDLMVERKEEFMESA 438 (476)
Q Consensus 412 ~~~~~~~l~~ai~~~l~~~~~~~~~~a 438 (476)
+.+++.++|.++++| +..+++.
T Consensus 365 ---d~~~la~~i~~ll~~--~~~~~~~ 386 (416)
T 2x6q_A 365 ---DANEAVEVVLYLLKH--PEVSKEM 386 (416)
T ss_dssp ---SHHHHHHHHHHHHHC--HHHHHHH
T ss_pred ---CHHHHHHHHHHHHhC--HHHHHHH
Confidence 899999999999986 5554443
No 38
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.05 E-value=1.1e-07 Score=92.15 Aligned_cols=142 Identities=14% Similarity=0.147 Sum_probs=91.5
Q ss_pred CCceEEEEecccccCCHHHHHHHHHHHhhCC------CcEEEEEcCCCCCCCCCCCCCchHHHH---H--hcCCceeeec
Q 011848 282 KQSVIYVSFGSIAVMSRDQLIEFYYGLVHSK------KSFLWVIRPDLISGKDGENQIPEELLE---A--TKERGCIAGW 350 (476)
Q Consensus 282 ~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~------~~~i~~~~~~~~~~~~~~~~~~~~~~~---~--~~~nv~~~~~ 350 (476)
+++.+++..|+... ......+++++.... .++ +.++. +. .+.+.+ + ..+|+.+.++
T Consensus 194 ~~~~~i~~~G~~~~--~K~~~~li~a~~~l~~~~~~~~~l-~i~G~------g~----~~~~~~~~~~~~~~~~v~~~g~ 260 (374)
T 2iw1_A 194 EQQNLLLQVGSDFG--RKGVDRSIEALASLPESLRHNTLL-FVVGQ------DK----PRKFEALAEKLGVRSNVHFFSG 260 (374)
T ss_dssp TTCEEEEEECSCTT--TTTHHHHHHHHHTSCHHHHHTEEE-EEESS------SC----CHHHHHHHHHHTCGGGEEEESC
T ss_pred CCCeEEEEeccchh--hcCHHHHHHHHHHhHhccCCceEE-EEEcC------CC----HHHHHHHHHHcCCCCcEEECCC
Confidence 44567778887652 233455666666553 233 33432 11 122221 1 2478888888
Q ss_pred cCH-HHHhCcCCCCcccc----ccChhHHHHHHHhCCceeccccccchhhhhHhhhcceeeeEEeccccCHHHHHHHHHH
Q 011848 351 VPQ-EEVLAHSAVGGFLT----HCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVND 425 (476)
Q Consensus 351 vp~-~~ll~~~~~~~~I~----HgG~gs~~eal~~GvP~l~~P~~~DQ~~na~r~~e~~G~g~~~~~~~~~~~l~~ai~~ 425 (476)
..+ ..++..+++ +|. -|..+++.||+++|+|+|+... ..+...+ +..+.|..++..-+.+++.++|.+
T Consensus 261 ~~~~~~~~~~ad~--~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i-~~~~~g~~~~~~~~~~~l~~~i~~ 333 (374)
T 2iw1_A 261 RNDVSELMAAADL--LLHPAYQEAAGIVLLEAITAGLPVLTTAV----CGYAHYI-ADANCGTVIAEPFSQEQLNEVLRK 333 (374)
T ss_dssp CSCHHHHHHHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEETT----STTTHHH-HHHTCEEEECSSCCHHHHHHHHHH
T ss_pred cccHHHHHHhcCE--EEeccccCCcccHHHHHHHCCCCEEEecC----CCchhhh-ccCCceEEeCCCCCHHHHHHHHHH
Confidence 654 668889997 664 5677899999999999999764 3445556 455778887545689999999999
Q ss_pred HHhHhHHHHHHHHHHHHHHH
Q 011848 426 LMVERKEEFMESADRMANLA 445 (476)
Q Consensus 426 ~l~~~~~~~~~~a~~l~~~~ 445 (476)
+++| +..+++..+-+++.
T Consensus 334 l~~~--~~~~~~~~~~~~~~ 351 (374)
T 2iw1_A 334 ALTQ--SPLRMAWAENARHY 351 (374)
T ss_dssp HHHC--HHHHHHHHHHHHHH
T ss_pred HHcC--hHHHHHHHHHHHHH
Confidence 9986 55554444333333
No 39
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=98.97 E-value=7.2e-09 Score=100.96 Aligned_cols=315 Identities=10% Similarity=0.028 Sum_probs=167.5
Q ss_pred CccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCccchh-hHhhcccccccccccCCCeeEEEcCC-CCCCCCCCC
Q 011848 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYD-RVIRHSSDAFSRYMQIPGFQFKTLTD-GLPRDHPRT 82 (476)
Q Consensus 5 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 82 (476)
-|.||++++ |++-...=+-.|.++|.++ +++.++.+...++ .+.+.. ..++.+. -|+ .+.. .
T Consensus 8 ~~~~~~~v~-GtRpe~~k~~p~~~~l~~~-~~~~~~~tgqh~~~~~~~~~---------~~~~~i~-~~~~~l~~----~ 71 (385)
T 4hwg_A 8 HMLKVMTIV-GTRPELIKLCCVISEFDKH-TKHILVHTGQNYAYELNQVF---------FDDMGIR-KPDYFLEV----A 71 (385)
T ss_dssp CCCEEEEEE-CSHHHHHHHHHHHHHHHHH-SEEEEEECSCHHHHHHTHHH---------HC-CCCC-CCSEECCC----C
T ss_pred hhhheeEEE-EcCHhHHHHHHHHHHHHhc-CCEEEEEeCCCCChhHHHHH---------HhhCCCC-CCceecCC----C
Confidence 477887765 4555555666666777776 8977777665555 222211 0112210 111 0111 1
Q ss_pred CCChHHHHHHHHhhCcHHHHHHHHcCCCCceEEEe--cCCcccHHHHHHHhCCceEEEecchhhHHHHHhhhhhhhhcCC
Q 011848 83 PDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIIT--DGYMSRAIDAAREVGVSIIYFRTISACAFWSFHCIPDIIDAGE 160 (476)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~D~Ii~--D~~~~~~~~~A~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~ 160 (476)
..+.... .......+.+++++. +||+|+. |..+.++..+|.++|||++.+...
T Consensus 72 ~~~~~~~----~~~~~~~l~~~l~~~--kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~eag------------------- 126 (385)
T 4hwg_A 72 ADNTAKS----IGLVIEKVDEVLEKE--KPDAVLFYGDTNSCLSAIAAKRRKIPIFHMEAG------------------- 126 (385)
T ss_dssp CCCSHHH----HHHHHHHHHHHHHHH--CCSEEEEESCSGGGGGHHHHHHTTCCEEEESCC-------------------
T ss_pred CCCHHHH----HHHHHHHHHHHHHhc--CCcEEEEECCchHHHHHHHHHHhCCCEEEEeCC-------------------
Confidence 1222222 222345678888887 9999885 434445588999999997654211
Q ss_pred CCCCCCcccCccccccCCCCCCCCCCCCCCcccCCCCCChHHHHH-HHHhhhhccCCEEEEcCccccchHHHHHHHh-cC
Q 011848 161 LPIKGTEDMDRLITTVPGMEGFLRCRDLPSFCRVNDPMDPHLLLF-ARETRLSAHADGLILNTFEDLEGPILSQIRN-HS 238 (476)
Q Consensus 161 ~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~s~~~le~~~~~~~~~-~~ 238 (476)
+ .. .. .. +.+.. +.... ..++++++.+-. ..+++.. +.
T Consensus 127 --------l----------rs-~~-~~-------------~pee~nR~~~~--~~a~~~~~~te~-----~~~~l~~~G~ 166 (385)
T 4hwg_A 127 --------N----------RC-FD-QR-------------VPEEINRKIID--HISDVNITLTEH-----ARRYLIAEGL 166 (385)
T ss_dssp --------C----------CC-SC-TT-------------STHHHHHHHHH--HHCSEEEESSHH-----HHHHHHHTTC
T ss_pred --------C----------cc-cc-cc-------------CcHHHHHHHHH--hhhceeecCCHH-----HHHHHHHcCC
Confidence 0 00 00 00 00001 11111 235566666532 2222222 12
Q ss_pred C-CCeeeeccccCcCccCCCccccCCCCcccccchhhhhhhcCCCCceEEEEecccccCC-HHHHHHHHHHHhhC----C
Q 011848 239 C-PNIYSIGPLNAHLKVRIPEKTYSSSSLWKIDRSCMAWLDKQPKQSVIYVSFGSIAVMS-RDQLIEFYYGLVHS----K 312 (476)
Q Consensus 239 ~-~~~~~vGp~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~-~~~~~~~~~al~~~----~ 312 (476)
. .+++++|-...+...... . ....+++.+-+.- .+++.|+++.|.....+ ...+..+++++... +
T Consensus 167 ~~~~I~vtGnp~~D~~~~~~-------~-~~~~~~~~~~lgl-~~~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~ 237 (385)
T 4hwg_A 167 PAELTFKSGSHMPEVLDRFM-------P-KILKSDILDKLSL-TPKQYFLISSHREENVDVKNNLKELLNSLQMLIKEYN 237 (385)
T ss_dssp CGGGEEECCCSHHHHHHHHH-------H-HHHHCCHHHHTTC-CTTSEEEEEECCC-----CHHHHHHHHHHHHHHHHHC
T ss_pred CcCcEEEECCchHHHHHHhh-------h-hcchhHHHHHcCC-CcCCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCC
Confidence 2 358888843322110000 0 0011223333432 23678888888764333 23456666666543 5
Q ss_pred CcEEEEEcCCCCCCCCCCCCCchHHHHH-----hcCCceeeeccC---HHHHhCcCCCCccccccChhHHHHHHHhCCce
Q 011848 313 KSFLWVIRPDLISGKDGENQIPEELLEA-----TKERGCIAGWVP---QEEVLAHSAVGGFLTHCGWNSTLESIVAGMPM 384 (476)
Q Consensus 313 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~-----~~~nv~~~~~vp---~~~ll~~~~~~~~I~HgG~gs~~eal~~GvP~ 384 (476)
..+|+..... +.+.+.+. ..+|+.+.+.++ ...+++.+++ +|+-.|. .+.||.+.|+|+
T Consensus 238 ~~vv~p~~p~----------~~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~adl--vvt~SGg-v~~EA~alG~Pv 304 (385)
T 4hwg_A 238 FLIIFSTHPR----------TKKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAFC--ILSDSGT-ITEEASILNLPA 304 (385)
T ss_dssp CEEEEEECHH----------HHHHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHHCSE--EEECCTT-HHHHHHHTTCCE
T ss_pred eEEEEECChH----------HHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCcE--EEECCcc-HHHHHHHcCCCE
Confidence 6677765310 11111111 135777765554 4568899997 9998876 469999999999
Q ss_pred eccccccchhhhhHhhhcceeeeEEeccccCHHHHHHHHHHHHhH
Q 011848 385 ICWPSFADQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMVE 429 (476)
Q Consensus 385 l~~P~~~DQ~~na~r~~e~~G~g~~~~~~~~~~~l~~ai~~~l~~ 429 (476)
|+++...+.++ .+ + .|.++.+. .++++|.+++.++++|
T Consensus 305 v~~~~~ter~e---~v-~-~G~~~lv~--~d~~~i~~ai~~ll~d 342 (385)
T 4hwg_A 305 LNIREAHERPE---GM-D-AGTLIMSG--FKAERVLQAVKTITEE 342 (385)
T ss_dssp EECSSSCSCTH---HH-H-HTCCEECC--SSHHHHHHHHHHHHTT
T ss_pred EEcCCCccchh---hh-h-cCceEEcC--CCHHHHHHHHHHHHhC
Confidence 99987554332 24 3 58776664 3799999999999986
No 40
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=98.71 E-value=5.3e-06 Score=83.49 Aligned_cols=135 Identities=10% Similarity=0.032 Sum_probs=80.8
Q ss_pred ceEEEEeccccc-CCHHHHHHHHHHHhhCCCcEEEEEcCCCCCCCCCCCCCchHH---HHHhcCCce-eeeccCHH---H
Q 011848 284 SVIYVSFGSIAV-MSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEEL---LEATKERGC-IAGWVPQE---E 355 (476)
Q Consensus 284 ~~V~vs~Gs~~~-~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~---~~~~~~nv~-~~~~vp~~---~ 355 (476)
..+++..|.... ...+.+...+..+.+.+.+++++..++ . ...+.+ .++.++|+. +.++ +.. .
T Consensus 291 ~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~-------~-~~~~~l~~~~~~~~~~v~~~~g~-~~~~~~~ 361 (485)
T 1rzu_A 291 SPLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGD-------V-ALEGALLAAASRHHGRVGVAIGY-NEPLSHL 361 (485)
T ss_dssp SCEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEEECBC-------H-HHHHHHHHHHHHTTTTEEEEESC-CHHHHHH
T ss_pred CeEEEEEccCccccCHHHHHHHHHHHHhcCceEEEEeCCc-------h-HHHHHHHHHHHhCCCcEEEecCC-CHHHHHH
Confidence 347788888762 223333333333333466766665321 0 011222 223446887 5677 543 5
Q ss_pred HhCcCCCCcccc----ccChhHHHHHHHhCCceeccccccchhhhhHhhhcce---------eeeEEeccccCHHHHHHH
Q 011848 356 VLAHSAVGGFLT----HCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVW---------KLGLDIKDLCDRNIVEKA 422 (476)
Q Consensus 356 ll~~~~~~~~I~----HgG~gs~~eal~~GvP~l~~P~~~DQ~~na~r~~e~~---------G~g~~~~~~~~~~~l~~a 422 (476)
++..+++ +|. -|-..++.||+++|+|+|+... ......+ +.. +.|..++ .-+.++|+++
T Consensus 362 ~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----gg~~e~v-~~~~~~~~~~~~~~G~l~~-~~d~~~la~~ 433 (485)
T 1rzu_A 362 MQAGCDA--IIIPSRFEPCGLTQLYALRYGCIPVVART----GGLADTV-IDANHAALASKAATGVQFS-PVTLDGLKQA 433 (485)
T ss_dssp HHHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHC-CBCCHHHHHTTCCCBEEES-SCSHHHHHHH
T ss_pred HHhcCCE--EEECcccCCCCHHHHHHHHCCCCEEEeCC----CChhhee-cccccccccccCCcceEeC-CCCHHHHHHH
Confidence 7888997 662 2445689999999999998754 2344444 333 4677774 4578999999
Q ss_pred HHHHH---hHhHHHHHHH
Q 011848 423 VNDLM---VERKEEFMES 437 (476)
Q Consensus 423 i~~~l---~~~~~~~~~~ 437 (476)
|.+++ +| +..+++
T Consensus 434 i~~ll~~~~~--~~~~~~ 449 (485)
T 1rzu_A 434 IRRTVRYYHD--PKLWTQ 449 (485)
T ss_dssp HHHHHHHHTC--HHHHHH
T ss_pred HHHHHHHhCC--HHHHHH
Confidence 99999 55 544443
No 41
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=98.61 E-value=1.2e-06 Score=92.65 Aligned_cols=78 Identities=13% Similarity=0.143 Sum_probs=52.6
Q ss_pred cCCceeee----ccCHHHHhC----cCCCCcccc----ccChhHHHHHHHhCCceeccccccchhhhhHhhhcceeeeEE
Q 011848 342 KERGCIAG----WVPQEEVLA----HSAVGGFLT----HCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLD 409 (476)
Q Consensus 342 ~~nv~~~~----~vp~~~ll~----~~~~~~~I~----HgG~gs~~eal~~GvP~l~~P~~~DQ~~na~r~~e~~G~g~~ 409 (476)
.++|.+.+ ++|+.++.. .+++ +|. -|-..++.||+++|+|+|+.. -......+ +..+.|..
T Consensus 639 ~~~V~flG~~~~~v~~~eL~~~~~~aaDv--fV~PS~~EgfglvllEAMA~G~PVIasd----~GG~~EiV-~dg~~Gll 711 (816)
T 3s28_A 639 NGQFRWISSQMDRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFATC----KGGPAEII-VHGKSGFH 711 (816)
T ss_dssp BBBEEEECCCCCHHHHHHHHHHHHHTTCE--EEECCSCBSSCHHHHHHHHTTCCEEEES----SBTHHHHC-CBTTTBEE
T ss_pred CCcEEEccCccccCCHHHHHHHHHhcCeE--EEECCCccCccHHHHHHHHcCCCEEEeC----CCChHHHH-ccCCcEEE
Confidence 46888887 445555543 4565 663 244569999999999999863 33344455 34456777
Q ss_pred eccccCHHHHHHHHHHHH
Q 011848 410 IKDLCDRNIVEKAVNDLM 427 (476)
Q Consensus 410 ~~~~~~~~~l~~ai~~~l 427 (476)
++ .-+.++++++|.+++
T Consensus 712 v~-p~D~e~LA~aI~~lL 728 (816)
T 3s28_A 712 ID-PYHGDQAADTLADFF 728 (816)
T ss_dssp EC-TTSHHHHHHHHHHHH
T ss_pred eC-CCCHHHHHHHHHHHH
Confidence 74 348899999997776
No 42
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=98.57 E-value=2.9e-05 Score=77.97 Aligned_cols=137 Identities=10% Similarity=0.064 Sum_probs=80.3
Q ss_pred CceEEEEecccc-cCCHHHHHHHHHHHhhCCCcEEEEEcCCCCCCCCCCCCCchHH---HHHhcCCce-eeeccCH--HH
Q 011848 283 QSVIYVSFGSIA-VMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEEL---LEATKERGC-IAGWVPQ--EE 355 (476)
Q Consensus 283 ~~~V~vs~Gs~~-~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~---~~~~~~nv~-~~~~vp~--~~ 355 (476)
+..+++..|... ....+.+...+..+.+.+.+++++..++ . ...+.+ .++.++++. +.++... ..
T Consensus 291 ~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~-------~-~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~ 362 (485)
T 2qzs_A 291 KVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGD-------P-VLQEGFLAAAAEYPGQVGVQIGYHEAFSHR 362 (485)
T ss_dssp TSCEEEEEEEESGGGCHHHHHHHHHHHHHTTCEEEEEEEEC-------H-HHHHHHHHHHHHSTTTEEEEESCCHHHHHH
T ss_pred CCeEEEEeccCccccCHHHHHHHHHHHhhCCcEEEEEeCCc-------h-HHHHHHHHHHHhCCCcEEEeCCCCHHHHHH
Confidence 445667777765 2233333333333333366766665321 0 011222 223346786 6677332 35
Q ss_pred HhCcCCCCcccc----ccChhHHHHHHHhCCceeccccccchhhhhHhhhcce---------eeeEEeccccCHHHHHHH
Q 011848 356 VLAHSAVGGFLT----HCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVW---------KLGLDIKDLCDRNIVEKA 422 (476)
Q Consensus 356 ll~~~~~~~~I~----HgG~gs~~eal~~GvP~l~~P~~~DQ~~na~r~~e~~---------G~g~~~~~~~~~~~l~~a 422 (476)
++..+++ +|. -|...++.||+++|+|+|+... ......+ +.. +.|..++ .-+.++|+++
T Consensus 363 ~~~~adv--~v~pS~~E~~g~~~lEAma~G~PvI~s~~----gg~~e~v-~~~~~~~~~~~~~~G~l~~-~~d~~~la~~ 434 (485)
T 2qzs_A 363 IMGGADV--ILVPSRFEPCGLTQLYGLKYGTLPLVRRT----GGLADTV-SDCSLENLADGVASGFVFE-DSNAWSLLRA 434 (485)
T ss_dssp HHHHCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHC-CBCCHHHHHTTCCCBEEEC-SSSHHHHHHH
T ss_pred HHHhCCE--EEECCccCCCcHHHHHHHHCCCCEEECCC----CCcccee-ccCccccccccccceEEEC-CCCHHHHHHH
Confidence 7888997 552 2445688999999999998754 2344444 332 4677774 3588999999
Q ss_pred HHHHH---hHhHHHHHHH
Q 011848 423 VNDLM---VERKEEFMES 437 (476)
Q Consensus 423 i~~~l---~~~~~~~~~~ 437 (476)
|.+++ +| +..+++
T Consensus 435 i~~ll~~~~~--~~~~~~ 450 (485)
T 2qzs_A 435 IRRAFVLWSR--PSLWRF 450 (485)
T ss_dssp HHHHHHHHTS--HHHHHH
T ss_pred HHHHHHHcCC--HHHHHH
Confidence 99999 55 554443
No 43
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.52 E-value=4e-05 Score=78.66 Aligned_cols=89 Identities=13% Similarity=0.138 Sum_probs=62.6
Q ss_pred CCceeeeccCHH---HHhCcCCCCccc---cccChhHHHHHHHhCCceeccccc---cchhhhhHhhhcceeeeEEeccc
Q 011848 343 ERGCIAGWVPQE---EVLAHSAVGGFL---THCGWNSTLESIVAGMPMICWPSF---ADQQINSRFVGEVWKLGLDIKDL 413 (476)
Q Consensus 343 ~nv~~~~~vp~~---~ll~~~~~~~~I---~HgG~gs~~eal~~GvP~l~~P~~---~DQ~~na~r~~e~~G~g~~~~~~ 413 (476)
++|.+.+++|+. .++..+++ || .+|+..++.||+++|+|+|++|-. .|.. +..+ ...|+...+..
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~--~~~l-~~~g~~e~v~~- 507 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVA--GSLN-HHLGLDEMNVA- 507 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHH--HHHH-HHHTCGGGBCS-
T ss_pred hHEEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHH--HHHH-HHCCChhhhcC-
Confidence 788999999854 46888887 65 237778999999999999997643 2211 2333 24466544433
Q ss_pred cCHHHHHHHHHHHHhHhHHHHHHHHHH
Q 011848 414 CDRNIVEKAVNDLMVERKEEFMESADR 440 (476)
Q Consensus 414 ~~~~~l~~ai~~~l~~~~~~~~~~a~~ 440 (476)
+.+++.+++.++++| +..+++..+
T Consensus 508 -~~~~la~~i~~l~~~--~~~~~~~~~ 531 (568)
T 2vsy_A 508 -DDAAFVAKAVALASD--PAALTALHA 531 (568)
T ss_dssp -SHHHHHHHHHHHHHC--HHHHHHHHH
T ss_pred -CHHHHHHHHHHHhcC--HHHHHHHHH
Confidence 889999999999997 665554433
No 44
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=98.41 E-value=3.9e-05 Score=75.28 Aligned_cols=88 Identities=13% Similarity=0.031 Sum_probs=56.7
Q ss_pred ceeeeccCHH---HHhCcCCCCcccc----ccChhHHHHHHHhCCceeccccccchhhhhHhhhcceee-----------
Q 011848 345 GCIAGWVPQE---EVLAHSAVGGFLT----HCGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKL----------- 406 (476)
Q Consensus 345 v~~~~~vp~~---~ll~~~~~~~~I~----HgG~gs~~eal~~GvP~l~~P~~~DQ~~na~r~~e~~G~----------- 406 (476)
+.+.+|+|+. .++..+++ +|. -|...++.||+++|+|+|+.... .....+ +. |.
T Consensus 256 v~~~g~~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~~----g~~e~v-~~-~~~~~i~~~~~~~ 327 (413)
T 3oy2_A 256 MINRTVLTDERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISAVG----GADDYF-SG-DCVYKIKPSAWIS 327 (413)
T ss_dssp EEECSCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEECCH----HHHHHS-CT-TTSEEECCCEEEE
T ss_pred eeccCcCCHHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcCCC----ChHHHH-cc-Ccccccccccccc
Confidence 5556999954 47788887 552 34456899999999999986543 222222 11 11
Q ss_pred -----eE--EeccccCHHHHHHHHHHHHhHhHHHHHHHHHHHHHH
Q 011848 407 -----GL--DIKDLCDRNIVEKAVNDLMVERKEEFMESADRMANL 444 (476)
Q Consensus 407 -----g~--~~~~~~~~~~l~~ai~~~l~~~~~~~~~~a~~l~~~ 444 (476)
|. .+. .-+.+++.++| ++++| +..+++..+-+.+
T Consensus 328 ~~~~~G~~gl~~-~~d~~~la~~i-~l~~~--~~~~~~~~~~a~~ 368 (413)
T 3oy2_A 328 VDDRDGIGGIEG-IIDVDDLVEAF-TFFKD--EKNRKEYGKRVQD 368 (413)
T ss_dssp CTTTCSSCCEEE-ECCHHHHHHHH-HHTTS--HHHHHHHHHHHHH
T ss_pred cccccCcceeeC-CCCHHHHHHHH-HHhcC--HHHHHHHHHHHHH
Confidence 33 443 23899999999 99997 6655444433333
No 45
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.41 E-value=1e-06 Score=75.83 Aligned_cols=141 Identities=13% Similarity=0.036 Sum_probs=90.4
Q ss_pred ceEEEEecccccCCHHHHHHHHHHHhhC-CCcEEEEEcCCCCCCCCCCCCCchHHH---HHhcCCceeeeccCH---HHH
Q 011848 284 SVIYVSFGSIAVMSRDQLIEFYYGLVHS-KKSFLWVIRPDLISGKDGENQIPEELL---EATKERGCIAGWVPQ---EEV 356 (476)
Q Consensus 284 ~~V~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~---~~~~~nv~~~~~vp~---~~l 356 (476)
..+++..|+.. ....+..+++++... +.+++++.... ....+..... ...++|+.+.+|+++ ..+
T Consensus 23 ~~~i~~~G~~~--~~Kg~~~li~a~~~l~~~~l~i~G~~~------~~~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~ 94 (177)
T 2f9f_A 23 GDFWLSVNRIY--PEKRIELQLEVFKKLQDEKLYIVGWFS------KGDHAERYARKIMKIAPDNVKFLGSVSEEELIDL 94 (177)
T ss_dssp CSCEEEECCSS--GGGTHHHHHHHHHHCTTSCEEEEBCCC------TTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHH
T ss_pred CCEEEEEeccc--cccCHHHHHHHHHhCCCcEEEEEecCc------cHHHHHHHHHhhhcccCCcEEEeCCCCHHHHHHH
Confidence 34566778775 223355666777766 45666654321 1111211111 123469999999997 558
Q ss_pred hCcCCCCcccc---c-cChhHHHHHHHhCCceeccccccchhhhhHhhhcceeeeEEeccccCHHHHHHHHHHHHhHhHH
Q 011848 357 LAHSAVGGFLT---H-CGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMVERKE 432 (476)
Q Consensus 357 l~~~~~~~~I~---H-gG~gs~~eal~~GvP~l~~P~~~DQ~~na~r~~e~~G~g~~~~~~~~~~~l~~ai~~~l~~~~~ 432 (476)
+..+++ +|. + |...++.||+++|+|+|+... ..+...+ +..+.|..+ .-+.+++.++|.++++| +
T Consensus 95 ~~~adi--~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i-~~~~~g~~~--~~d~~~l~~~i~~l~~~--~ 163 (177)
T 2f9f_A 95 YSRCKG--LLCTAKDEDFGLTPIEAMASGKPVIAVNE----GGFKETV-INEKTGYLV--NADVNEIIDAMKKVSKN--P 163 (177)
T ss_dssp HHHCSE--EEECCSSCCSCHHHHHHHHTTCCEEEESS----HHHHHHC-CBTTTEEEE--CSCHHHHHHHHHHHHHC--T
T ss_pred HHhCCE--EEeCCCcCCCChHHHHHHHcCCcEEEeCC----CCHHHHh-cCCCccEEe--CCCHHHHHHHHHHHHhC--H
Confidence 888997 554 3 334599999999999998753 3445555 444567666 46899999999999986 4
Q ss_pred HH-HHHHHHHHH
Q 011848 433 EF-MESADRMAN 443 (476)
Q Consensus 433 ~~-~~~a~~l~~ 443 (476)
.. ++++++.++
T Consensus 164 ~~~~~~~~~~a~ 175 (177)
T 2f9f_A 164 DKFKKDCFRRAK 175 (177)
T ss_dssp TTTHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 44 566655544
No 46
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=98.28 E-value=0.00027 Score=69.19 Aligned_cols=75 Identities=12% Similarity=0.025 Sum_probs=56.3
Q ss_pred hcCCceeeeccCHHH---HhCcCCCCcccc---c-cChhHHHHHH-------HhCCceeccccccchhhhhHhhhcceee
Q 011848 341 TKERGCIAGWVPQEE---VLAHSAVGGFLT---H-CGWNSTLESI-------VAGMPMICWPSFADQQINSRFVGEVWKL 406 (476)
Q Consensus 341 ~~~nv~~~~~vp~~~---ll~~~~~~~~I~---H-gG~gs~~eal-------~~GvP~l~~P~~~DQ~~na~r~~e~~G~ 406 (476)
..+||.+.+++|+.+ ++..+++ +|. + |-.+++.||+ ++|+|+|+... + +.-..
T Consensus 263 l~~~V~f~G~~~~~~l~~~~~~adv--~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v-~~~~~ 329 (406)
T 2hy7_A 263 YGDNVIVYGEMKHAQTIGYIKHARF--GIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------V-VGPYK 329 (406)
T ss_dssp CCTTEEEECCCCHHHHHHHHHTCSE--EECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------G-TCSCS
T ss_pred CCCCEEEcCCCCHHHHHHHHHhcCE--EEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------c-ccCcc
Confidence 357899999999644 6888887 543 2 3345789999 99999999754 4 33345
Q ss_pred eEE-eccccCHHHHHHHHHHHHhH
Q 011848 407 GLD-IKDLCDRNIVEKAVNDLMVE 429 (476)
Q Consensus 407 g~~-~~~~~~~~~l~~ai~~~l~~ 429 (476)
|.. ++ .-+.++|+++|.+++++
T Consensus 330 G~l~v~-~~d~~~la~ai~~ll~~ 352 (406)
T 2hy7_A 330 SRFGYT-PGNADSVIAAITQALEA 352 (406)
T ss_dssp SEEEEC-TTCHHHHHHHHHHHHHC
T ss_pred eEEEeC-CCCHHHHHHHHHHHHhC
Confidence 666 53 35889999999999986
No 47
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=98.17 E-value=0.0006 Score=65.93 Aligned_cols=95 Identities=13% Similarity=0.173 Sum_probs=65.8
Q ss_pred CceeeeccC-HHHHhCcCCCCcccc---c--cChhHHHHHHHhCCceeccccccchhhhhHhhhcceeeeEEeccccCHH
Q 011848 344 RGCIAGWVP-QEEVLAHSAVGGFLT---H--CGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRN 417 (476)
Q Consensus 344 nv~~~~~vp-~~~ll~~~~~~~~I~---H--gG~gs~~eal~~GvP~l~~P~~~DQ~~na~r~~e~~G~g~~~~~~~~~~ 417 (476)
++.+.++.. -..++..+++ ++. . +|..++.||+++|+|+|+-|...+..+....+. +.|.++.+ -+.+
T Consensus 261 ~v~~~~~~~dl~~~y~~aDv--~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~-~~G~l~~~---~d~~ 334 (374)
T 2xci_A 261 DVILVDRFGILKELYPVGKI--AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLE-KEGAGFEV---KNET 334 (374)
T ss_dssp SEEECCSSSCHHHHGGGEEE--EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHH-HTTCEEEC---CSHH
T ss_pred cEEEECCHHHHHHHHHhCCE--EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHH-HCCCEEEe---CCHH
Confidence 345555544 3568888987 443 2 244789999999999998777777666666552 45777766 3789
Q ss_pred HHHHHHHHHHhH-hHHHHHHHHHHHHHH
Q 011848 418 IVEKAVNDLMVE-RKEEFMESADRMANL 444 (476)
Q Consensus 418 ~l~~ai~~~l~~-~~~~~~~~a~~l~~~ 444 (476)
+|.++|.++++| ....+.+++++..+.
T Consensus 335 ~La~ai~~ll~d~~r~~mg~~ar~~~~~ 362 (374)
T 2xci_A 335 ELVTKLTELLSVKKEIKVEEKSREIKGC 362 (374)
T ss_dssp HHHHHHHHHHHSCCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHh
Confidence 999999999974 113466666666554
No 48
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=97.80 E-value=0.00016 Score=60.82 Aligned_cols=130 Identities=12% Similarity=0.128 Sum_probs=77.0
Q ss_pred ceEEEEecccccCCHHHHHHHHHHHhhCC----CcEEEEEcCCCCCCCCCCCCCchHHH---HHhcCCceeeeccCHH--
Q 011848 284 SVIYVSFGSIAVMSRDQLIEFYYGLVHSK----KSFLWVIRPDLISGKDGENQIPEELL---EATKERGCIAGWVPQE-- 354 (476)
Q Consensus 284 ~~V~vs~Gs~~~~~~~~~~~~~~al~~~~----~~~i~~~~~~~~~~~~~~~~~~~~~~---~~~~~nv~~~~~vp~~-- 354 (476)
+.+++..|+... ......+++++..+. .++++... +. ..+.+. ++.+.++.+ +|+|+.
T Consensus 2 ~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~l~i~G~-------g~---~~~~~~~~~~~~~~~v~~-g~~~~~~~ 68 (166)
T 3qhp_A 2 PFKIAMVGRYSN--EKNQSVLIKAVALSKYKQDIVLLLKGK-------GP---DEKKIKLLAQKLGVKAEF-GFVNSNEL 68 (166)
T ss_dssp CEEEEEESCCST--TTTHHHHHHHHHTCTTGGGEEEEEECC-------ST---THHHHHHHHHHHTCEEEC-CCCCHHHH
T ss_pred ceEEEEEeccch--hcCHHHHHHHHHHhccCCCeEEEEEeC-------Cc---cHHHHHHHHHHcCCeEEE-eecCHHHH
Confidence 567788888752 233555666666542 33333322 11 122222 233447778 999864
Q ss_pred -HHhCcCCCCcccc----ccChhHHHHHHHhCC-ceeccccccchhhhhHhhhcceeeeEEeccccCHHHHHHHHHHHHh
Q 011848 355 -EVLAHSAVGGFLT----HCGWNSTLESIVAGM-PMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMV 428 (476)
Q Consensus 355 -~ll~~~~~~~~I~----HgG~gs~~eal~~Gv-P~l~~P~~~DQ~~na~r~~e~~G~g~~~~~~~~~~~l~~ai~~~l~ 428 (476)
.++..+++ +|. -|...++.||+++|+ |+|+.... ......+ +..+. .+ ..-+.+++.++|.++++
T Consensus 69 ~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~---~~~~~~~-~~~~~--~~-~~~~~~~l~~~i~~l~~ 139 (166)
T 3qhp_A 69 LEILKTCTL--YVHAANVESEAIACLEAISVGIVPVIANSPL---SATRQFA-LDERS--LF-EPNNAKDLSAKIDWWLE 139 (166)
T ss_dssp HHHHTTCSE--EEECCCSCCCCHHHHHHHHTTCCEEEECCTT---CGGGGGC-SSGGG--EE-CTTCHHHHHHHHHHHHH
T ss_pred HHHHHhCCE--EEECCcccCccHHHHHHHhcCCCcEEeeCCC---Cchhhhc-cCCce--EE-cCCCHHHHHHHHHHHHh
Confidence 47888887 664 344569999999996 99993321 1122222 22222 22 33589999999999998
Q ss_pred HhHHHHHHH
Q 011848 429 ERKEEFMES 437 (476)
Q Consensus 429 ~~~~~~~~~ 437 (476)
+ +..+++
T Consensus 140 ~--~~~~~~ 146 (166)
T 3qhp_A 140 N--KLERER 146 (166)
T ss_dssp C--HHHHHH
T ss_pred C--HHHHHH
Confidence 6 554433
No 49
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=97.70 E-value=0.0026 Score=60.69 Aligned_cols=105 Identities=16% Similarity=0.143 Sum_probs=70.2
Q ss_pred CccEEEEEcCCCccCHHHHHHHHHHHHhC--CCEEEEEeCccchhhHhhcccccccccccCCCe-eEEEcCCCCCCCCCC
Q 011848 5 DHVHVAILPLPAVGHVNSMLNLAELLGHA--GIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGF-QFKTLTDGLPRDHPR 81 (476)
Q Consensus 5 ~~~~il~~~~~~~GH~~p~l~La~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 81 (476)
+++||+++-..+.|++.-+..+.++|+++ +.+|++++.+.+.+-+.. .|.+ +++.++.
T Consensus 7 ~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~-----------~p~vd~vi~~~~-------- 67 (349)
T 3tov_A 7 DYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEY-----------NPNIDELIVVDK-------- 67 (349)
T ss_dssp TTCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSS-----------CTTCSEEEEECC--------
T ss_pred CCCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhc-----------CCCccEEEEeCc--------
Confidence 56799999999999999999999999998 999999999875444432 4456 3555541
Q ss_pred CCCChHHHHHHHHhhCcHHHHHHHHcCCCCc-eEEEecCCcccHHHHHHHhCCceEE
Q 011848 82 TPDKFPELVDSLNCATPPLLKEMVSDSKSPV-NCIITDGYMSRAIDAAREVGVSIIY 137 (476)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~-D~Ii~D~~~~~~~~~A~~lgiP~v~ 137 (476)
. .....+..+. . +..-++. .++ |++|.=........++...|+|..+
T Consensus 68 -~-~~~~~~~~~~----~-l~~~Lr~--~~y~D~vidl~~~~rs~~l~~~~~a~~ri 115 (349)
T 3tov_A 68 -K-GRHNSISGLN----E-VAREINA--KGKTDIVINLHPNERTSYLAWKIHAPITT 115 (349)
T ss_dssp -S-SHHHHHHHHH----H-HHHHHHH--HCCCCEEEECCCSHHHHHHHHHHCCSEEE
T ss_pred -c-cccccHHHHH----H-HHHHHhh--CCCCeEEEECCCChHHHHHHHHhCCCeEE
Confidence 0 1111111111 1 1222233 389 9999655555566788888998765
No 50
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=97.55 E-value=0.017 Score=54.78 Aligned_cols=102 Identities=8% Similarity=-0.029 Sum_probs=66.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhC--CCEEEEEeCccchhhHhhcccccccccccCCCe-eEEEcCCCCCCCCCCCC
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHA--GIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGF-QFKTLTDGLPRDHPRTP 83 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~r--GH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 83 (476)
|||+++...+.|++.-...+.++|+++ |.+|++++.+.+.+.+.. .|.+ +++.++. ... .
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~~~-----------~p~i~~v~~~~~--~~~----~ 63 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSR-----------MPEVNEAIPMPL--GHG----A 63 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTT-----------CTTEEEEEEC------------
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhc-----------CCccCEEEEecC--Ccc----c
Confidence 599999999999999999999999997 999999999865544332 3445 4554431 000 0
Q ss_pred CChHHHHHHHHhhCcHHHHHHHHcC-CCCceEEEecCCcccHHHHHHHhCCceEE
Q 011848 84 DKFPELVDSLNCATPPLLKEMVSDS-KSPVNCIITDGYMSRAIDAAREVGVSIIY 137 (476)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~ll~~~-~~~~D~Ii~D~~~~~~~~~A~~lgiP~v~ 137 (476)
. ....+.++.+.+ ..++|++|.=........++...|+|...
T Consensus 64 ~------------~~~~~~~l~~~l~~~~~D~vid~~~~~~sa~~~~~~~~~~~i 106 (348)
T 1psw_A 64 L------------EIGERRKLGHSLREKRYDRAYVLPNSFKSALVPLFAGIPHRT 106 (348)
T ss_dssp -------------CHHHHHHHHHHTTTTTCSEEEECSCCSGGGHHHHHTTCSEEE
T ss_pred c------------chHHHHHHHHHHHhcCCCEEEECCCChHHHHHHHHhCCCEEe
Confidence 0 111223444444 35899999322334566778888999744
No 51
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=97.55 E-value=0.00013 Score=69.32 Aligned_cols=111 Identities=17% Similarity=0.153 Sum_probs=81.6
Q ss_pred CceeeeccCHHHH---hCcCCCCccccccCh---------hHHHHHHHhCCceeccccccchhhhhHhhhcceeeeEEec
Q 011848 344 RGCIAGWVPQEEV---LAHSAVGGFLTHCGW---------NSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIK 411 (476)
Q Consensus 344 nv~~~~~vp~~~l---l~~~~~~~~I~HgG~---------gs~~eal~~GvP~l~~P~~~DQ~~na~r~~e~~G~g~~~~ 411 (476)
||.+.+|+|+.++ |..++.+++..-+.. +-+.|++++|+|+|+.+ ...++..+ ++.|+|..++
T Consensus 215 nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v-~~~~~G~~~~ 289 (339)
T 3rhz_A 215 NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELI-ENNGLGWIVK 289 (339)
T ss_dssp TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHH-HHHTCEEEES
T ss_pred CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHH-HhCCeEEEeC
Confidence 9999999998775 444555334423322 35889999999999754 45667777 5789999885
Q ss_pred cccCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 011848 412 DLCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDI 466 (476)
Q Consensus 412 ~~~~~~~l~~ai~~~l~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~i~~l 466 (476)
+.+++.+++.++..++...+++|+++.++++++ |....+++.+.+..|
T Consensus 290 ---~~~e~~~~i~~l~~~~~~~m~~na~~~a~~~~~----~~f~k~~l~~~~~~~ 337 (339)
T 3rhz_A 290 ---DVEEAIMKVKNVNEDEYIELVKNVRSFNPILRK----GFFTRRLLTESVFQA 337 (339)
T ss_dssp ---SHHHHHHHHHHCCHHHHHHHHHHHHHHTHHHHT----THHHHHHHHHHHHHH
T ss_pred ---CHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhc----cHHHHHHHHHHHHHh
Confidence 578888999887766667899999999999887 455555666665544
No 52
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=97.33 E-value=0.0034 Score=54.31 Aligned_cols=83 Identities=11% Similarity=0.016 Sum_probs=58.9
Q ss_pred Ccee-eeccCH---HHHhCcCCCCccccc----cChhHHHHHHHhCCceeccccccchhhhhHhhhcceeeeEEeccccC
Q 011848 344 RGCI-AGWVPQ---EEVLAHSAVGGFLTH----CGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCD 415 (476)
Q Consensus 344 nv~~-~~~vp~---~~ll~~~~~~~~I~H----gG~gs~~eal~~GvP~l~~P~~~DQ~~na~r~~e~~G~g~~~~~~~~ 415 (476)
++.+ .+++++ ..++..+++ +|.- |...++.||+++|+|+|+.... .+...+ + .+.|..++ .-+
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~~----~~~e~~-~-~~~g~~~~-~~~ 166 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAVG----GLRDII-T-NETGILVK-AGD 166 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESCH----HHHHHC-C-TTTCEEEC-TTC
T ss_pred CEEEEeccCCHHHHHHHHHHCCE--EEECCCCCCccHHHHHHHHCCCCEEEeCCC----ChHHHc-C-CCceEEec-CCC
Confidence 8999 999985 357888887 5532 3356899999999999887543 233333 2 34566663 348
Q ss_pred HHHHHHHHHHHHh-HhHHHHHHH
Q 011848 416 RNIVEKAVNDLMV-ERKEEFMES 437 (476)
Q Consensus 416 ~~~l~~ai~~~l~-~~~~~~~~~ 437 (476)
.+++.++|.++++ | +..+++
T Consensus 167 ~~~l~~~i~~l~~~~--~~~~~~ 187 (200)
T 2bfw_A 167 PGELANAILKALELS--RSDLSK 187 (200)
T ss_dssp HHHHHHHHHHHHHCC--HHHHHH
T ss_pred HHHHHHHHHHHHhcC--HHHHHH
Confidence 8999999999998 7 554443
No 53
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.19 E-value=0.0068 Score=63.72 Aligned_cols=136 Identities=18% Similarity=0.244 Sum_probs=88.5
Q ss_pred CCCceEEEEecccccCCHHHHHHHHHHHhhCCCcEEEEEcCCCCCCCCCCCCCchHHHHH------hcCCceeeeccCHH
Q 011848 281 PKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEA------TKERGCIAGWVPQE 354 (476)
Q Consensus 281 ~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~------~~~nv~~~~~vp~~ 354 (476)
+...+||.||-+....+++.+..-.+-|++.+.-.+|....+. .....+.+. .++++++.+..|..
T Consensus 520 p~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~--------~~~~~l~~~~~~~gi~~~r~~f~~~~~~~ 591 (723)
T 4gyw_A 520 PEDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPA--------VGEPNIQQYAQNMGLPQNRIIFSPVAPKE 591 (723)
T ss_dssp CTTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTG--------GGHHHHHHHHHHTTCCGGGEEEEECCCHH
T ss_pred CCCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcH--------HHHHHHHHHHHhcCCCcCeEEECCCCCHH
Confidence 3567999999999999999999999999998888888875431 111222211 14678888888865
Q ss_pred H---HhCcCCCCccc---cccChhHHHHHHHhCCceecccccc-chhhhhHhhhcceeeeEEeccccCHHHHHHHHHHHH
Q 011848 355 E---VLAHSAVGGFL---THCGWNSTLESIVAGMPMICWPSFA-DQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLM 427 (476)
Q Consensus 355 ~---ll~~~~~~~~I---~HgG~gs~~eal~~GvP~l~~P~~~-DQ~~na~r~~e~~G~g~~~~~~~~~~~l~~ai~~~l 427 (476)
+ .+..+|+ ++ ..+|.+|+.|||+.|||+|+++--. =-..-+..+ ..+|+...+. -+.++-.+...++-
T Consensus 592 ~~l~~~~~~Di--~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l-~~~gl~e~ia--~~~~~Y~~~a~~la 666 (723)
T 4gyw_A 592 EHVRRGQLADV--CLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQL-TCLGCLELIA--KNRQEYEDIAVKLG 666 (723)
T ss_dssp HHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHH-HHHTCGGGBC--SSHHHHHHHHHHHH
T ss_pred HHHHHhCCCeE--EeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHH-HHcCCccccc--CCHHHHHHHHHHHh
Confidence 5 4456665 64 4899999999999999999998321 111122233 3455544332 34555544444554
Q ss_pred hH
Q 011848 428 VE 429 (476)
Q Consensus 428 ~~ 429 (476)
+|
T Consensus 667 ~d 668 (723)
T 4gyw_A 667 TD 668 (723)
T ss_dssp HC
T ss_pred cC
Confidence 44
No 54
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=97.10 E-value=0.0035 Score=63.48 Aligned_cols=144 Identities=8% Similarity=0.003 Sum_probs=92.2
Q ss_pred ceEEEEecccccCCHHHHHHHHHHHhhCCCcEEEE--EcCCCCCCCCCCCCCchHHH-HHhcCCceeeeccCHHH---Hh
Q 011848 284 SVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWV--IRPDLISGKDGENQIPEELL-EATKERGCIAGWVPQEE---VL 357 (476)
Q Consensus 284 ~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~-~~~~~nv~~~~~vp~~~---ll 357 (476)
.++|.+|++.....++.+....+.+++.+..++|. .+... +....+-..+. ..+.+++.+.+.+|+.+ .+
T Consensus 441 ~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~----g~~~~~~~~~~~~GI~~Rv~F~g~~p~~e~la~y 516 (631)
T 3q3e_A 441 VVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQSN----GITHPYVERFIKSYLGDSATAHPHSPYHQYLRIL 516 (631)
T ss_dssp EEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSCC----GGGHHHHHHHHHHHHGGGEEEECCCCHHHHHHHH
T ss_pred eEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCc----hhhHHHHHHHHHcCCCccEEEcCCCCHHHHHHHH
Confidence 68899999888888999988888888887777764 33110 11101111111 12446888889998655 44
Q ss_pred CcCCCCccc---cccChhHHHHHHHhCCceecccccc--chhhhhHhhhcceeeeEE-eccccCHHHHHHHHHHHHhHhH
Q 011848 358 AHSAVGGFL---THCGWNSTLESIVAGMPMICWPSFA--DQQINSRFVGEVWKLGLD-IKDLCDRNIVEKAVNDLMVERK 431 (476)
Q Consensus 358 ~~~~~~~~I---~HgG~gs~~eal~~GvP~l~~P~~~--DQ~~na~r~~e~~G~g~~-~~~~~~~~~l~~ai~~~l~~~~ 431 (476)
..+|+ ++ ..+|..|+.||+++|||+|+++-.. ... -+..+ ...|+... +. -+.++..+...++.+|
T Consensus 517 ~~aDI--fLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRv-gaSlL-~~~GLpE~LIA--~d~eeYv~~Av~La~D-- 588 (631)
T 3q3e_A 517 HNCDM--MVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHI-DEGLF-KRLGLPEWLIA--NTVDEYVERAVRLAEN-- 588 (631)
T ss_dssp HTCSE--EECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHH-HHHHH-HHTTCCGGGEE--SSHHHHHHHHHHHHHC--
T ss_pred hcCcE--EEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHh-HHHHH-HhcCCCcceec--CCHHHHHHHHHHHhCC--
Confidence 77777 43 3488899999999999999987421 211 12223 24566542 32 3678888888888887
Q ss_pred HHHHHHHH
Q 011848 432 EEFMESAD 439 (476)
Q Consensus 432 ~~~~~~a~ 439 (476)
+..+++.+
T Consensus 589 ~~~l~~LR 596 (631)
T 3q3e_A 589 HQERLELR 596 (631)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 65555443
No 55
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=95.60 E-value=0.042 Score=53.59 Aligned_cols=85 Identities=12% Similarity=0.088 Sum_probs=57.1
Q ss_pred cCCceeeeccCHHH---HhCcCCCCcccc--c--cChhHHHHHHHhCCceeccccccchhhhhHhhhcceeeeEEecccc
Q 011848 342 KERGCIAGWVPQEE---VLAHSAVGGFLT--H--CGWNSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLC 414 (476)
Q Consensus 342 ~~nv~~~~~vp~~~---ll~~~~~~~~I~--H--gG~gs~~eal~~GvP~l~~P~~~DQ~~na~r~~e~~G~g~~~~~~~ 414 (476)
.+++.+.+++|+.+ ++..+++ ||. . |=..++.||+++|+|+|+ -..+ ....+ +.-..|+.++ .-
T Consensus 294 ~~~v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v-~~~~~G~lv~-~~ 364 (413)
T 2x0d_A 294 GIHLNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLS-NWHSNIVSLE-QL 364 (413)
T ss_dssp TEEEEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGG-GTBTTEEEES-SC
T ss_pred cCcEEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhh-hcCCCEEEeC-CC
Confidence 36888899998654 7788887 553 2 223478999999999997 3221 12234 3434676664 45
Q ss_pred CHHHHHHHHHHHHhHhHHHHHHH
Q 011848 415 DRNIVEKAVNDLMVERKEEFMES 437 (476)
Q Consensus 415 ~~~~l~~ai~~~l~~~~~~~~~~ 437 (476)
++++|+++|.++++| +..+++
T Consensus 365 d~~~la~ai~~ll~~--~~~~~~ 385 (413)
T 2x0d_A 365 NPENIAETLVELCMS--FNNRDV 385 (413)
T ss_dssp SHHHHHHHHHHHHHH--TC----
T ss_pred CHHHHHHHHHHHHcC--HHHHHH
Confidence 889999999999998 666655
No 56
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=94.71 E-value=0.091 Score=53.08 Aligned_cols=134 Identities=11% Similarity=0.056 Sum_probs=73.5
Q ss_pred CceEEEEecccc-cCCHHHHHHHHHHHhhCCCcEEEEEcCCCCCCCCCCCCCchHHHHHhcCCceeeeccCHH---HHhC
Q 011848 283 QSVIYVSFGSIA-VMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQE---EVLA 358 (476)
Q Consensus 283 ~~~V~vs~Gs~~-~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~vp~~---~ll~ 358 (476)
+..+++..|... ....+.+...+..+.+.+.++++...++ +.....-.......+.++.+....+.. .++.
T Consensus 326 ~~p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~~l~l~G~G~-----~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 400 (536)
T 3vue_A 326 KIPLIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGK-----KKFEKLLKSMEEKYPGKVRAVVKFNAPLAHLIMA 400 (536)
T ss_dssp TSCEEEEECCBSGGGCHHHHHHHHHHHTTSSCEEEEECCBC-----HHHHHHHHHHHHHSTTTEEEECSCCHHHHHHHHH
T ss_pred CCcEEEEEeeccccCChHHHHHHHHHhHhhCCeEEEEeccC-----chHHHHHHHHHhhcCCceEEEEeccHHHHHHHHH
Confidence 344667777775 2333333333334444566766655321 000000111223456788888777753 4788
Q ss_pred cCCCCccccc---cCh-hHHHHHHHhCCceeccccccchhhhhHhhhcceeeeEEec---------cccCHHHHHHHHHH
Q 011848 359 HSAVGGFLTH---CGW-NSTLESIVAGMPMICWPSFADQQINSRFVGEVWKLGLDIK---------DLCDRNIVEKAVND 425 (476)
Q Consensus 359 ~~~~~~~I~H---gG~-gs~~eal~~GvP~l~~P~~~DQ~~na~r~~e~~G~g~~~~---------~~~~~~~l~~ai~~ 425 (476)
.+++ ||.= =|. .+++||+++|+|+|+-...+ ....+ +.-..|.... ...+.+.|.++|++
T Consensus 401 ~aD~--~v~PS~~E~fgl~~lEAma~G~PvI~s~~gG----~~e~V-~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~r 473 (536)
T 3vue_A 401 GADV--LAVPSRFEPCGLIQLQGMRYGTPCACASTGG----LVDTV-IEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKR 473 (536)
T ss_dssp HCSE--EEECCSCCSSCSHHHHHHHTTCCEEECSCTH----HHHHC-CBTTTEEECCCCCSCTTCCCHHHHHHHHHHHHH
T ss_pred hhhe--eecccccCCCCHHHHHHHHcCCCEEEcCCCC----chhee-eCCCCccccccCCCceeEECCCCHHHHHHHHHH
Confidence 8887 6542 233 48999999999999876432 22222 1211222111 23567899999998
Q ss_pred HHh
Q 011848 426 LMV 428 (476)
Q Consensus 426 ~l~ 428 (476)
+++
T Consensus 474 al~ 476 (536)
T 3vue_A 474 AIK 476 (536)
T ss_dssp HHH
T ss_pred HHH
Confidence 876
No 57
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=91.58 E-value=0.79 Score=40.69 Aligned_cols=115 Identities=10% Similarity=0.109 Sum_probs=64.7
Q ss_pred ccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCccchhhHhhcccccccccccCCCeeEEEcCCCCCCCCCCCCCC
Q 011848 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRTPDK 85 (476)
Q Consensus 6 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (476)
|||||+.-=-+. |.--+.+|+++|.+.| +|+++.+...+.-.-.... . ..-+++..+.+... ..-.+.
T Consensus 1 ~M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~sit----~---~~pl~~~~~~~~~~---~~v~GT 68 (251)
T 2phj_A 1 MPTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGVGHSLT----F---TEPLKMRKIDTDFY---TVIDGT 68 (251)
T ss_dssp -CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCCSCC----C---SSCEEEEEEETTEE---EETTCC
T ss_pred CCEEEEECCCCC-CCHHHHHHHHHHHhcC-CEEEEecCCCccCCcccee----c---CCCeEEEEecCCCe---EEECCC
Confidence 578888776655 5556888999999988 9999999775443322211 1 11145554432210 001112
Q ss_pred hHHHHHHHHhhCcHHHHHHHHcCCCCceEEEecCC----------cc---cHHHHHHHhCCceEEEecc
Q 011848 86 FPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGY----------MS---RAIDAAREVGVSIIYFRTI 141 (476)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~ll~~~~~~~D~Ii~D~~----------~~---~~~~~A~~lgiP~v~~~~~ 141 (476)
+. -+-.+. +..++.. .+||+||+... +. ++..-|..+|||.|.++..
T Consensus 69 Pa-DCV~la------l~~l~~~--~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~~ 128 (251)
T 2phj_A 69 PA-DCVHLG------YRVILEE--KKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSAF 128 (251)
T ss_dssp HH-HHHHHH------HHTTTTT--CCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEEE
T ss_pred HH-HHHHHH------HHHhcCC--CCCCEEEECCcCCCcCCCCCccchHHHHHHHHHHcCCCeEEEEcC
Confidence 21 111111 1222221 48999997532 22 4556677889999998653
No 58
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=90.11 E-value=0.16 Score=51.18 Aligned_cols=37 Identities=16% Similarity=0.373 Sum_probs=29.3
Q ss_pred CccEEEEEcC--------CCccCHHHHHHHHHHHHhCCCEEEEEeCc
Q 011848 5 DHVHVAILPL--------PAVGHVNSMLNLAELLGHAGIKITFLNTE 43 (476)
Q Consensus 5 ~~~~il~~~~--------~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 43 (476)
.+|||+|++. |+.|++ .-.|.++|+++||+|++++|.
T Consensus 8 ~~MkIl~vs~E~~P~~K~GGLadv--v~~L~~aL~~~G~~V~Vi~P~ 52 (536)
T 3vue_A 8 HHMNVVFVGAEMAPWSKTGGLGDV--LGGLPPAMAANGHRVMVISPR 52 (536)
T ss_dssp CCCEEEEECSCBTTTBCSSHHHHH--HHHHHHHHHTTTCEEEEEEEC
T ss_pred CCcEEEEEEEeccchhccCcHHHH--HHHHHHHHHHcCCeEEEEecC
Confidence 5789999974 333343 567899999999999999963
No 59
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=89.24 E-value=1.7 Score=38.79 Aligned_cols=115 Identities=10% Similarity=0.096 Sum_probs=61.7
Q ss_pred ccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCccchhhHhhcccccccccccCCCeeEEEcCCCCCCCCCCCCCC
Q 011848 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRTPDK 85 (476)
Q Consensus 6 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (476)
|.|||+.-=-+. +---+.+|+++|.+.| +|+++.|...+.-.-.... . ..-+++....... .....+.
T Consensus 1 Mp~ILlTNDDGi-~apGi~~L~~~l~~~g-~V~VvAP~~~~Sg~g~siT----~---~~pl~~~~~~~~~---~~~v~GT 68 (251)
T 2wqk_A 1 MPTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGVGHSLT----F---TEPLKMRKIDTDF---YTVIDGT 68 (251)
T ss_dssp -CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCCSCC----C---SSCEEEEEEETTE---EEETTCC
T ss_pred CCEEEEEcCCCC-CcHHHHHHHHHHHhCC-CEEEEeeCCCCcccccCcC----C---CCCceeEEeeccc---eeecCCC
Confidence 457777655444 4445778899999998 5999998765433322211 1 1124444433110 0000111
Q ss_pred hHHHHHHHHhhCcHHHHHHHHcCCCCceEEEecC----------Ccc---cHHHHHHHhCCceEEEecc
Q 011848 86 FPELVDSLNCATPPLLKEMVSDSKSPVNCIITDG----------YMS---RAIDAAREVGVSIIYFRTI 141 (476)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~ll~~~~~~~D~Ii~D~----------~~~---~~~~~A~~lgiP~v~~~~~ 141 (476)
+. -+-.+ .+..++.+ .+||+||+.. ++. +|+.=|..+|||.|.++..
T Consensus 69 Pa-DCV~l------al~~~l~~--~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~Ea~~~GipaIA~S~~ 128 (251)
T 2wqk_A 69 PA-DCVHL------GYRVILEE--KKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSAF 128 (251)
T ss_dssp HH-HHHHH------HHHTTTTT--CCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEEE
T ss_pred hH-HHHhh------hhhhhcCC--CCCCEEEeCccCCCccccceecchHHHHHHHHHhcCCCeEEEEcc
Confidence 21 11111 12233333 4999999843 333 5666678889999998643
No 60
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=88.00 E-value=4.6 Score=35.74 Aligned_cols=123 Identities=12% Similarity=0.113 Sum_probs=69.2
Q ss_pred CccEEEEEcC--CCccCHHHHHHHHHHHHhCCCEEEEEeC----cc-----chh--hH----hhcc-cccccccccCCCe
Q 011848 5 DHVHVAILPL--PAVGHVNSMLNLAELLGHAGIKITFLNT----EH-----YYD--RV----IRHS-SDAFSRYMQIPGF 66 (476)
Q Consensus 5 ~~~~il~~~~--~~~GH~~p~l~La~~L~~rGH~Vt~~~~----~~-----~~~--~~----~~~~-~~~~~~~~~~~~~ 66 (476)
+|+|.+|++. ..-|-..-...|++.|+++|.+|.++=+ .. ..+ .+ .... +.. ...+
T Consensus 19 ~m~k~i~ItgT~t~vGKT~vs~gL~~~L~~~G~~V~~fKPv~~g~~~~~~~~~D~~~~~~~~~~~~~g~~------~~~~ 92 (242)
T 3qxc_A 19 FQGHMLFISATNTNAGKTTCARLLAQYCNACGVKTILLKPIETGVNDAINHSSDAHLFLQDNRLLDRSLT------LKDI 92 (242)
T ss_dssp CCCEEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEECCEECSCCTTTCCCSHHHHHHHHHHTTCTTCC------HHHH
T ss_pred hcCcEEEEEeCCCCCcHHHHHHHHHHHHHhCCCceEEEeeeecCCcccCCCCchHHHHHHHHHHHhCCCC------hHHe
Confidence 4667766665 4668999999999999999999999853 11 011 11 1110 000 0000
Q ss_pred eEEEcCCCCCCCCCCCCCChHHHHHHHHhh----CcHHHHHHHHcCCCCceEEEecCCc---------ccHHHHHHHhCC
Q 011848 67 QFKTLTDGLPRDHPRTPDKFPELVDSLNCA----TPPLLKEMVSDSKSPVNCIITDGYM---------SRAIDAAREVGV 133 (476)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ll~~~~~~~D~Ii~D~~~---------~~~~~~A~~lgi 133 (476)
.-..+. ..... ..-...... ..+.+.+.++++..+.|+||.|... .....+|+.++.
T Consensus 93 ~p~~~~---------~p~sp-~~aa~~~g~~~~i~~~~I~~~~~~l~~~~D~vlIEGagGl~~pl~~~~~~adlA~~l~~ 162 (242)
T 3qxc_A 93 SFYRYH---------KVSAP-LIAQQEEDPNAPIDTDNLTQRLHNFTKTYDLVIVEGAGGLCVPITLEENMLDFALKLKA 162 (242)
T ss_dssp CCEECS---------SSSCH-HHHHHHHCTTCCCCHHHHHHHHHHGGGTCSEEEEECCSCTTCBSSSSCBHHHHHHHHTC
T ss_pred eeEEEC---------CCCCh-HHHHHHcCCCCcCCHHHHHHHHHHHHhcCCEEEEECCCCccccccccchHHHHHHHcCC
Confidence 001110 01111 111111111 2345566666554589999988631 246889999999
Q ss_pred ceEEEecchh
Q 011848 134 SIIYFRTISA 143 (476)
Q Consensus 134 P~v~~~~~~~ 143 (476)
|++.+.....
T Consensus 163 pVILV~~~~l 172 (242)
T 3qxc_A 163 KMLLISHDNL 172 (242)
T ss_dssp EEEEEECCST
T ss_pred CEEEEEcCCC
Confidence 9999887653
No 61
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=87.04 E-value=1.1 Score=35.80 Aligned_cols=50 Identities=12% Similarity=0.123 Sum_probs=32.9
Q ss_pred CCCCCccEEEEEcC-CCc-cCHHHHHHHHHHHHhCCCEEEEEeCccchhhHh
Q 011848 1 MEKQDHVHVAILPL-PAV-GHVNSMLNLAELLGHAGIKITFLNTEHYYDRVI 50 (476)
Q Consensus 1 m~~~~~~~il~~~~-~~~-GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~ 50 (476)
|.+.+.||++++-+ |.. -.+--.+=+...|.++||+|++.+++.....++
T Consensus 1 ~~~~~~m~~LilLGCPE~Pvq~p~~lYl~~~Lk~~G~~v~VA~npAAlkLle 52 (157)
T 1kjn_A 1 MKTESTGKALMVLGCPESPVQIPLAIYTSHKLKKKGFRVTVTANPAALRLVQ 52 (157)
T ss_dssp -----CCEEEEECCCSCSTTHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHH
T ss_pred CccccceeeeEEecCCCCcchhhHHHHHHHHHHhcCCeeEEecCHHHHhhee
Confidence 56666778877655 433 334447778999999999999999987554443
No 62
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=86.70 E-value=0.32 Score=47.27 Aligned_cols=40 Identities=18% Similarity=0.246 Sum_probs=31.3
Q ss_pred CccEEEEEcCCC-----ccCHHHHHHHHHHHHhCCCEEEEEeCcc
Q 011848 5 DHVHVAILPLPA-----VGHVNSMLNLAELLGHAGIKITFLNTEH 44 (476)
Q Consensus 5 ~~~~il~~~~~~-----~GH~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (476)
++|||++++..- .|=......|+++|+++||+|++++...
T Consensus 45 ~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~GheV~Vvt~~~ 89 (413)
T 2x0d_A 45 KGKRLNLLVPSINQEHMFGGISTALKLFEQFDNKKFKKRIILTDA 89 (413)
T ss_dssp CSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTTCEEEEEESSC
T ss_pred CCceEEEEeCCCCccccccHHHHHHHHHHHHHHcCCceEEEEecC
Confidence 468998887531 1334568999999999999999999853
No 63
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=84.17 E-value=19 Score=31.92 Aligned_cols=120 Identities=15% Similarity=0.151 Sum_probs=69.7
Q ss_pred CccEEEEEcC--CCccCHHHHHHHHHHHHhCCCEEEEEeCc------c--chhhHhhcccccccccccCC-CeeEEEcCC
Q 011848 5 DHVHVAILPL--PAVGHVNSMLNLAELLGHAGIKITFLNTE------H--YYDRVIRHSSDAFSRYMQIP-GFQFKTLTD 73 (476)
Q Consensus 5 ~~~~il~~~~--~~~GH~~p~l~La~~L~~rGH~Vt~~~~~------~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 73 (476)
++||.+|++. ..-|-..-.+.|++.|+++|++|.++=+- . ....+....+ .+ ..+.+.+..
T Consensus 24 ~~m~~i~Itgt~t~vGKT~vt~gL~~~l~~~G~~V~~fKPv~~g~~~~~~D~~~~~~~~g--------~~~~~~~~~~~~ 95 (251)
T 3fgn_A 24 SHMTILVVTGTGTGVGKTVVCAALASAARQAGIDVAVCKPVQTGTARGDDDLAEVGRLAG--------VTQLAGLARYPQ 95 (251)
T ss_dssp SSCEEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEEEEECCGGGTCCHHHHHHHHHC--------CCEEEEEEECSS
T ss_pred cCCCEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEeeeecCCCCCCHHHHHHHHHcC--------CCCCCCCeeECC
Confidence 3455555544 36689999999999999999999998631 1 0111222111 00 011111211
Q ss_pred CCCCCCCCCCCChHHHHHHHHhh---CcHHHHHHHHcCCCCceEEEecCCc----------ccHHHHHHHhCCceEEEec
Q 011848 74 GLPRDHPRTPDKFPELVDSLNCA---TPPLLKEMVSDSKSPVNCIITDGYM----------SRAIDAAREVGVSIIYFRT 140 (476)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ll~~~~~~~D~Ii~D~~~----------~~~~~~A~~lgiP~v~~~~ 140 (476)
.... ......... ..+.+.+.++++..++|+||.|... .....+|+.++.|++.+..
T Consensus 96 ---------p~sP-~~aa~~~~~~~~~~~~i~~~~~~l~~~~D~vlIEGagGl~~pl~~~~~~~adla~~l~~pVILV~~ 165 (251)
T 3fgn_A 96 ---------PMAP-AAAAEHAGMALPARDQIVRLIADLDRPGRLTLVEGAGGLLVELAEPGVTLRDVAVDVAAAALVVVT 165 (251)
T ss_dssp ---------SSCH-HHHHHHTTCCCCCHHHHHHHHHTTCCTTCEEEEECSSSTTCEEETTTEEHHHHHHHTTCEEEEEEC
T ss_pred ---------CCCh-HHHHHHcCCCCCCHHHHHHHHHHHHhcCCEEEEECCCCCcCCcCcccchHHHHHHHcCCCEEEEEc
Confidence 0111 111111111 2345667777665689999988731 3567899999999999877
Q ss_pred ch
Q 011848 141 IS 142 (476)
Q Consensus 141 ~~ 142 (476)
..
T Consensus 166 ~~ 167 (251)
T 3fgn_A 166 AD 167 (251)
T ss_dssp SS
T ss_pred CC
Confidence 64
No 64
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=82.74 E-value=7.6 Score=34.31 Aligned_cols=39 Identities=18% Similarity=0.238 Sum_probs=31.2
Q ss_pred ccEEEEEcC--CCccCHHHHHHHHHHHHhCCCEEEEEeCcc
Q 011848 6 HVHVAILPL--PAVGHVNSMLNLAELLGHAGIKITFLNTEH 44 (476)
Q Consensus 6 ~~~il~~~~--~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (476)
|+||+.++. |+.|-..-...||..|+++|++|.++-...
T Consensus 1 M~~vi~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (260)
T 3q9l_A 1 MARIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFAI 41 (260)
T ss_dssp -CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 456655544 678999999999999999999999997644
No 65
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=81.76 E-value=6.4 Score=37.62 Aligned_cols=36 Identities=19% Similarity=0.089 Sum_probs=28.0
Q ss_pred CCccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCcc
Q 011848 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEH 44 (476)
Q Consensus 4 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (476)
|+++||+++..+..+ +.+++++++.|++|.++..+.
T Consensus 5 ~~~~~ilI~g~g~~~-----~~~~~a~~~~G~~~v~v~~~~ 40 (403)
T 4dim_A 5 YDNKRLLILGAGRGQ-----LGLYKAAKELGIHTIAGTMPN 40 (403)
T ss_dssp -CCCEEEEECCCGGG-----HHHHHHHHHHTCEEEEEECSS
T ss_pred cCCCEEEEECCcHhH-----HHHHHHHHHCCCEEEEEcCCC
Confidence 346699999887643 668999999999999997643
No 66
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=81.69 E-value=2.2 Score=36.82 Aligned_cols=46 Identities=15% Similarity=0.079 Sum_probs=38.2
Q ss_pred ccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCccchhhHhhc
Q 011848 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRH 52 (476)
Q Consensus 6 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~ 52 (476)
+.||++.-.|+.|-.. ...|.+.|+++|++|.++.++.....+..+
T Consensus 4 ~k~IllgvTGaiaa~k-~~~ll~~L~~~g~eV~vv~T~~A~~fi~~e 49 (209)
T 3zqu_A 4 PERITLAMTGASGAQY-GLRLLDCLVQEEREVHFLISKAAQLVMATE 49 (209)
T ss_dssp CSEEEEEECSSSCHHH-HHHHHHHHHHTTCEEEEEECHHHHHHHHHH
T ss_pred CCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEECccHHHHHHHH
Confidence 3599999999988777 899999999999999999997755555444
No 67
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=81.55 E-value=6.5 Score=33.27 Aligned_cols=37 Identities=24% Similarity=0.515 Sum_probs=30.2
Q ss_pred EEEEE-cCCCccCHHHHHHHHHHHHhCCCEEEEEeCcc
Q 011848 8 HVAIL-PLPAVGHVNSMLNLAELLGHAGIKITFLNTEH 44 (476)
Q Consensus 8 ~il~~-~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (476)
.|+|. +-|+-|-..-...||..|+++|++|.++-...
T Consensus 3 vi~v~s~kgG~GKTt~a~~la~~la~~g~~vlliD~D~ 40 (206)
T 4dzz_A 3 VISFLNPKGGSGKTTAVINIATALSRSGYNIAVVDTDP 40 (206)
T ss_dssp EEEECCSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred EEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEECCC
Confidence 34444 34788999999999999999999999998753
No 68
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=81.31 E-value=4.5 Score=35.77 Aligned_cols=116 Identities=10% Similarity=0.049 Sum_probs=61.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCccchhhHhhcccccccccccCCCeeEEEcCCCCCCCCCCCCCCh
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRTPDKF 86 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (476)
||||+.-=-+. |---+.+|+++|.+.| +|+++.|...+.-.-.... . ..-+++..++.+-......-.+.+
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~siT----l---~~pl~~~~~~~~~~~~~~~v~GTP 71 (247)
T 1j9j_A 1 MRILVTNDDGI-QSKGIIVLAELLSEEH-EVFVVAPDKERSATGHSIT----I---HVPLWMKKVFISERVVAYSTTGTP 71 (247)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTCTTCCC----C---SSCCCEEECCCSSSEEEEEESSCH
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCccccc----C---CCCeEEEEeccCCCCceEEECCcH
Confidence 46666654444 4445788999999888 9999999775443332211 1 111455544321000000011111
Q ss_pred HHHHHHHHhhCcHHHHHHHHcCCCCceEEEecCC----------cc---cHHHHHHHhCCceEEEecc
Q 011848 87 PELVDSLNCATPPLLKEMVSDSKSPVNCIITDGY----------MS---RAIDAAREVGVSIIYFRTI 141 (476)
Q Consensus 87 ~~~~~~~~~~~~~~~~~ll~~~~~~~D~Ii~D~~----------~~---~~~~~A~~lgiP~v~~~~~ 141 (476)
... -.+ .+..++ +.+||+||+... +. ++..=|..+|||.|.++..
T Consensus 72 aDC-V~l------al~~l~---~~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~~ 129 (247)
T 1j9j_A 72 ADC-VKL------AYNVVM---DKRVDLIVSGVNRGPNMGMDILHSGTVSGAMEGAMMNIPSIAISSA 129 (247)
T ss_dssp HHH-HHH------HHHTTS---TTCCSEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEES
T ss_pred HHH-HHH------HHHhhc---cCCCCEEEECCccCCCCCcCeecchhHHHHHHHHhcCCCeEEEecC
Confidence 111 111 112222 249999997532 22 4556677789999999763
No 69
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=81.27 E-value=2.1 Score=34.14 Aligned_cols=46 Identities=11% Similarity=0.086 Sum_probs=37.7
Q ss_pred ccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCccchhhHhh
Q 011848 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIR 51 (476)
Q Consensus 6 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~ 51 (476)
+.||++.+.+.-+|-....-++..|..+|++|..++.....+.+.+
T Consensus 3 ~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~~~p~e~~v~ 48 (137)
T 1ccw_A 3 KKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVLSPQELFIK 48 (137)
T ss_dssp CCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEEECHHHHHH
T ss_pred CCEEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHH
Confidence 4589999999999999999999999999999998875444444433
No 70
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=80.83 E-value=7.5 Score=36.86 Aligned_cols=37 Identities=14% Similarity=0.174 Sum_probs=32.2
Q ss_pred ccEEEEEcC-CCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 6 HVHVAILPL-PAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 6 ~~~il~~~~-~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
|++|++++. |+-|-..-...||..|+++|++|.++..
T Consensus 1 M~~i~~~~gkGG~GKTt~a~~la~~la~~g~~vllvd~ 38 (374)
T 3igf_A 1 MALILTFLGKSGVARTKIAIAAAKLLASQGKRVLLAGL 38 (374)
T ss_dssp -CEEEEEECSBHHHHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CcEEEEEeCCCCCcHHHHHHHHHHHHHHCCCCeEEEeC
Confidence 568877776 6779999999999999999999999988
No 71
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=80.15 E-value=7.5 Score=32.41 Aligned_cols=101 Identities=12% Similarity=0.073 Sum_probs=57.6
Q ss_pred cchhhhhhhcCCCCceEEEEecc-cccCCHHHHHHHHHHHhhCCCcEEEEEcCCCCCCCCCCCCCchHHHHHhcCCceee
Q 011848 270 DRSCMAWLDKQPKQSVIYVSFGS-IAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIA 348 (476)
Q Consensus 270 ~~~l~~~l~~~~~~~~V~vs~Gs-~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~ 348 (476)
-.++.++|.+ ++...||.|. .. ......++..+.+-+.+=++... ..+.+... . ...+++
T Consensus 34 A~~lg~~La~---~g~~lVsGGg~~G-----im~aa~~gAl~~gG~tigVlP~~-------~~~~~~~~---~-~~~i~~ 94 (176)
T 2iz6_A 34 ANELGKQIAT---HGWILLTGGRSLG-----VMHEAMKGAKEAGGTTIGVLPGP-------DTSEISDA---V-DIPIVT 94 (176)
T ss_dssp HHHHHHHHHH---TTCEEEEECSSSS-----HHHHHHHHHHHTTCCEEEEECC------------CCTT---C-SEEEEC
T ss_pred HHHHHHHHHH---CCCEEEECCCccC-----HhHHHHHHHHHcCCEEEEEeCch-------hhhhhccC---C-ceeEEc
Confidence 4567777774 5667777776 44 34445555555666666555421 11111110 0 123344
Q ss_pred eccCHHH--HhCcCCCCccccccChhHHHHH---HHhCCceeccccc
Q 011848 349 GWVPQEE--VLAHSAVGGFLTHCGWNSTLES---IVAGMPMICWPSF 390 (476)
Q Consensus 349 ~~vp~~~--ll~~~~~~~~I~HgG~gs~~ea---l~~GvP~l~~P~~ 390 (476)
+..+.+. +...++. .++--||.||+.|+ +.+++|++++|.+
T Consensus 95 ~~~~~Rk~~m~~~sda-~IvlpGg~GTL~E~~~al~~~kpV~~l~~~ 140 (176)
T 2iz6_A 95 GLGSARDNINALSSNV-LVAVGMGPGTAAEVALALKAKKPVVLLGTQ 140 (176)
T ss_dssp CCCSSSCCCCGGGCSE-EEEESCCHHHHHHHHHHHHTTCCEEEESCC
T ss_pred CCHHHHHHHHHHhCCE-EEEecCCccHHHHHHHHHHhCCcEEEEcCc
Confidence 6666433 3344553 56677999987665 6699999999983
No 72
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=79.87 E-value=5.6 Score=39.28 Aligned_cols=112 Identities=12% Similarity=0.044 Sum_probs=69.1
Q ss_pred CceeeeccCHH---HHhCcCCCCcccc--ccChh-HHHHHHHhC---CceeccccccchhhhhHhhhcceeeeEEecccc
Q 011848 344 RGCIAGWVPQE---EVLAHSAVGGFLT--HCGWN-STLESIVAG---MPMICWPSFADQQINSRFVGEVWKLGLDIKDLC 414 (476)
Q Consensus 344 nv~~~~~vp~~---~ll~~~~~~~~I~--HgG~g-s~~eal~~G---vP~l~~P~~~DQ~~na~r~~e~~G~g~~~~~~~ 414 (476)
.|.+...+|+. +++..+++ ++++ +=|+| +..||+++| .|.|+--+.+ .+.-+ .. -|+.++ ..
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv-~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aG----a~~~l-~~--~allVn-P~ 423 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL-LIFNSTVDGQNLSTFEAPLVNERDADVILSETCG----AAEVL-GE--YCRSVN-PF 423 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE-EEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBT----THHHH-GG--GSEEEC-TT
T ss_pred CEEEeCCCCHHHHHHHHHhccE-EEECcccccCChhHHHHHHhCCCCCCEEEeCCCC----CHHHh-CC--CEEEEC-CC
Confidence 46777888864 46677887 3333 46888 468999996 5554432221 12122 11 355663 45
Q ss_pred CHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHh
Q 011848 415 DRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIKMM 469 (476)
Q Consensus 415 ~~~~l~~ai~~~l~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~i~~l~~~ 469 (476)
+.++++++|.++|++..++-+++.+++.+.+++ .....-++.|+++|...
T Consensus 424 D~~~lA~AI~~aL~m~~~er~~r~~~~~~~V~~-----~d~~~W~~~fl~~L~~~ 473 (496)
T 3t5t_A 424 DLVEQAEAISAALAAGPRQRAEAAARRRDAARP-----WTLEAWVQAQLDGLAAD 473 (496)
T ss_dssp BHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTT-----CBHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH-----CCHHHHHHHHHHHHhhc
Confidence 899999999999984223445555555555543 34456678888888654
No 73
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=79.45 E-value=16 Score=31.03 Aligned_cols=97 Identities=8% Similarity=0.095 Sum_probs=60.7
Q ss_pred ccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCccc-----hhhHhhcccccccccccCCCeeEEEcCCCCCCCCC
Q 011848 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHY-----YDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHP 80 (476)
Q Consensus 6 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (476)
+..|.+++.++.|-..-.+.+|-..+.+|+.|.|+..-.. ...+.+. . ++.++....++...
T Consensus 28 ~g~i~v~tG~GkGKTTaA~GlalRA~g~G~rV~~vQF~Kg~~~~gE~~~l~~----------L-~v~~~~~g~gf~~~-- 94 (196)
T 1g5t_A 28 RGIIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQFIKGTWPNGERNLLEP----------H-GVEFQVMATGFTWE-- 94 (196)
T ss_dssp CCCEEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEESSCCSSCCHHHHHHGG----------G-TCEEEECCTTCCCC--
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEeeCCCCCccHHHHHHh----------C-CcEEEEcccccccC--
Confidence 4589999999999999999999999999999999964332 1122222 2 27777776543321
Q ss_pred CCCCChHHHHHHHHhhCcHHHHHHHHcC-CCCceEEEecCCc
Q 011848 81 RTPDKFPELVDSLNCATPPLLKEMVSDS-KSPVNCIITDGYM 121 (476)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~-~~~~D~Ii~D~~~ 121 (476)
......- .. .....+....+.+ +.++|+||.|-+.
T Consensus 95 --~~~~~~~-~~---~a~~~l~~a~~~l~~~~yDlvILDEi~ 130 (196)
T 1g5t_A 95 --TQNREAD-TA---ACMAVWQHGKRMLADPLLDMVVLDELT 130 (196)
T ss_dssp --GGGHHHH-HH---HHHHHHHHHHHHTTCTTCSEEEEETHH
T ss_pred --CCCcHHH-HH---HHHHHHHHHHHHHhcCCCCEEEEeCCC
Confidence 1111111 11 1123333333443 3599999999764
No 74
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=79.45 E-value=11 Score=33.28 Aligned_cols=114 Identities=13% Similarity=0.071 Sum_probs=61.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCccchhhHhhcccccccccccCCCeeEEEcCCCCCC-C--CCCCC
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPR-D--HPRTP 83 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~ 83 (476)
||||+.-=-+. |---+.+|+++|.+.| +|+++.|...+.-.-.... . ..-+++..++.+.+. + ...-.
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~siT----l---~~pl~~~~~~~~~~~~~~~~~~v~ 71 (244)
T 2e6c_A 1 MRILVTNDDGI-YSPGLWALAEAASQFG-EVFVAAPDTEQSAAGHAIT----I---AHPVRAYPHPSPLHAPHFPAYRVR 71 (244)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEECSSCCCCCSSCC----C---SSCBEEEECCCCTTSCCCCEEEEE
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCccccc----C---CCCeEEEEeccCcCCCCCceEEEc
Confidence 46666654444 4445788999999988 9999999775433322211 1 112566666432100 0 00011
Q ss_pred CChHHHHHHHHhhCcHHHHHHHHcCCCCceEEEecCC----------cc---cHHHHHHHhCCceEEEecc
Q 011848 84 DKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGY----------MS---RAIDAAREVGVSIIYFRTI 141 (476)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~ll~~~~~~~D~Ii~D~~----------~~---~~~~~A~~lgiP~v~~~~~ 141 (476)
+.+. -+-.+. +. +. .+||+||+... +. ++..=|..+|||.|.++..
T Consensus 72 GTPa-DCV~la------l~--l~---~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~~ 130 (244)
T 2e6c_A 72 GTPA-DCVALG------LH--LF---GPVDLVLSGVNLGSNLGHEIWHSGTVAAAKQGYLFGLSAAAFSVP 130 (244)
T ss_dssp SCHH-HHHHHH------HH--HS---CSCCEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCEEEEEEEC
T ss_pred CcHH-HHHHHH------Hc--CC---CCCCEEEECCccCCCCCcCeechHhHHHHHHHHhcCCCeEEEecc
Confidence 1111 111111 11 22 39999997532 22 4556677789999998653
No 75
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=78.96 E-value=5.8 Score=36.98 Aligned_cols=40 Identities=18% Similarity=0.182 Sum_probs=34.1
Q ss_pred CccEEEEEcC-CCccCHHHHHHHHHHHHhCCCEEEEEeCcc
Q 011848 5 DHVHVAILPL-PAVGHVNSMLNLAELLGHAGIKITFLNTEH 44 (476)
Q Consensus 5 ~~~~il~~~~-~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (476)
++++|+|++. |+-|-..-...||..|+++|++|.++....
T Consensus 14 ~~~~i~~~sgkGGvGKTt~a~~lA~~la~~g~~vllid~D~ 54 (334)
T 3iqw_A 14 RSLRWIFVGGKGGVGKTTTSCSLAIQLAKVRRSVLLLSTDP 54 (334)
T ss_dssp TTCCEEEEECSTTSSHHHHHHHHHHHHTTSSSCEEEEECCS
T ss_pred CCeEEEEEeCCCCccHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 3457776665 788999999999999999999999999864
No 76
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=77.01 E-value=2.9 Score=35.47 Aligned_cols=42 Identities=12% Similarity=0.140 Sum_probs=29.5
Q ss_pred CCCccEEEEEcCCCccCHHHHH-HHHHHHHhCCCEEEEEeCcc
Q 011848 3 KQDHVHVAILPLPAVGHVNSML-NLAELLGHAGIKITFLNTEH 44 (476)
Q Consensus 3 ~~~~~~il~~~~~~~GH~~p~l-~La~~L~~rGH~Vt~~~~~~ 44 (476)
+|.||||+++-....|+..-+. .+++.|.+.|++|.++....
T Consensus 2 ~M~M~kilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l~~ 44 (200)
T 2a5l_A 2 SMSSPYILVLYYSRHGATAEMARQIARGVEQGGFEARVRTVPA 44 (200)
T ss_dssp ---CCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEBCCC
T ss_pred CCCcceEEEEEeCCCChHHHHHHHHHHHHhhCCCEEEEEEhhh
Confidence 5778899888877788776544 45677777899998887543
No 77
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=76.81 E-value=2.7 Score=37.40 Aligned_cols=45 Identities=9% Similarity=0.053 Sum_probs=31.9
Q ss_pred CCCCCccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCccchh
Q 011848 1 MEKQDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYD 47 (476)
Q Consensus 1 m~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~ 47 (476)
|.++++||||+.-=-+. |.--..+|+++|.+ +|+|+++.+...+.
T Consensus 6 ~~~~~~m~ILlTNDDGi-~apGi~aL~~~l~~-~~~V~VVAP~~~~S 50 (261)
T 3ty2_A 6 KTATPKLRLLLSNDDGV-YAKGLAILAKTLAD-LGEVDVVAPDRNRS 50 (261)
T ss_dssp -----CCEEEEECSSCT-TCHHHHHHHHHHTT-TSEEEEEEESSCCT
T ss_pred hccCCCCeEEEEcCCCC-CCHHHHHHHHHHHh-cCCEEEEecCCCCc
Confidence 34567899988876665 55567888999987 89999999977544
No 78
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=76.63 E-value=4.1 Score=34.45 Aligned_cols=45 Identities=11% Similarity=0.121 Sum_probs=37.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCccchhhHhhc
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRH 52 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~ 52 (476)
.||++...|+.|-. =...|.++|.++|++|.++.++.....+..+
T Consensus 2 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~~i~~e 46 (189)
T 2ejb_A 2 QKIALCITGASGVI-YGIKLLQVLEELDFSVDLVISRNAKVVLKEE 46 (189)
T ss_dssp CEEEEEECSSTTHH-HHHHHHHHHHHTTCEEEEEECHHHHHHHHHC
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEChhHHHHhhHH
Confidence 48999999998854 5789999999999999999997755555543
No 79
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=76.31 E-value=10 Score=38.90 Aligned_cols=77 Identities=13% Similarity=0.052 Sum_probs=43.9
Q ss_pred eccCH---------HHHhCcCCCCccccc---cC-hhHHHHHHHhCCceecccccc--chhhhhHhhhcceeeeEEec--
Q 011848 349 GWVPQ---------EEVLAHSAVGGFLTH---CG-WNSTLESIVAGMPMICWPSFA--DQQINSRFVGEVWKLGLDIK-- 411 (476)
Q Consensus 349 ~~vp~---------~~ll~~~~~~~~I~H---gG-~gs~~eal~~GvP~l~~P~~~--DQ~~na~r~~e~~G~g~~~~-- 411 (476)
.|++. .+++..+++ ||.- =| ..+.+||+++|+|+|+.-..+ |-.....--...-+.|+.+.
T Consensus 499 ~~L~~~d~lf~~d~~~~~~~adv--fV~PS~~EgfGl~~LEAmA~G~PvI~s~~gG~~d~V~dg~~~~~~~~tG~lV~~r 576 (725)
T 3nb0_A 499 EFLNANNPILGLDYDEFVRGCHL--GVFPSYYEPWGYTPAECTVMGVPSITTNVSGFGSYMEDLIETNQAKDYGIYIVDR 576 (725)
T ss_dssp SCCCTTCSSSCCCHHHHHHHCSE--EECCCSSBSSCHHHHHHHHTTCCEEEETTBHHHHHHHTTSCHHHHHHTTEEEECC
T ss_pred cccCCCCccchhHHHHHHhhceE--EEeccccCCCCHHHHHHHHcCCCEEEeCCCChhhhhhccccccCCCCceEEEeCC
Confidence 77765 457888987 5543 33 458999999999999865432 22211100000013455553
Q ss_pred cccCHHHHHHHHHHHH
Q 011848 412 DLCDRNIVEKAVNDLM 427 (476)
Q Consensus 412 ~~~~~~~l~~ai~~~l 427 (476)
...+.+++.++|.++|
T Consensus 577 d~~d~ee~aeaLa~aL 592 (725)
T 3nb0_A 577 RFKAPDESVEQLVDYM 592 (725)
T ss_dssp SSSCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHH
Confidence 3456666655555555
No 80
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=74.82 E-value=3.7 Score=35.01 Aligned_cols=46 Identities=9% Similarity=0.052 Sum_probs=37.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhC-CCEEEEEeCccchhhHhhcc
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHA-GIKITFLNTEHYYDRVIRHS 53 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~r-GH~Vt~~~~~~~~~~~~~~~ 53 (476)
|||++...|+.|-.. ...|.+.|+++ |++|.++.++.....+..+.
T Consensus 1 ~~IllgvTGsiaa~k-~~~ll~~L~~~~g~~V~vv~T~~A~~fi~~~t 47 (197)
T 1sbz_A 1 MKLIVGMTGATGAPL-GVALLQALREMPNVETHLVMSKWAKTTIELET 47 (197)
T ss_dssp CEEEEEECSSSCHHH-HHHHHHHHHTCTTCEEEEEECHHHHHHHHHHS
T ss_pred CEEEEEEeChHHHHH-HHHHHHHHHhccCCEEEEEECchHHHHhHHHH
Confidence 489998888887766 89999999999 99999999977555555443
No 81
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=73.72 E-value=1.9 Score=34.26 Aligned_cols=38 Identities=16% Similarity=0.197 Sum_probs=26.1
Q ss_pred CCCCCccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCc
Q 011848 1 MEKQDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTE 43 (476)
Q Consensus 1 m~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 43 (476)
|..+.|+||+++-. |. --..+++.|.++||+|+++...
T Consensus 1 m~~~~~~~v~I~G~---G~--iG~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 1 MTENGRYEYIVIGS---EA--AGVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp -----CCSEEEECC---SH--HHHHHHHHHHHTTCCEEEEESC
T ss_pred CCCCCCCEEEEECC---CH--HHHHHHHHHHHCCCeEEEEECC
Confidence 44445678988865 43 2467899999999999998763
No 82
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=73.68 E-value=19 Score=34.55 Aligned_cols=98 Identities=15% Similarity=0.191 Sum_probs=52.8
Q ss_pred CCCCCccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCccchhhHhhcccccccccccCCCe-eEEEcCCCCCCCC
Q 011848 1 MEKQDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGF-QFKTLTDGLPRDH 79 (476)
Q Consensus 1 m~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 79 (476)
|.+.+ .||+++..+.... .+.++.++.|++|+++..... ..... .... .++.++.
T Consensus 1 M~~~~-k~l~Il~~~~~~~-----~i~~aa~~lG~~vv~v~~~~~--~~~~~----------~~~~d~~~~~~~------ 56 (425)
T 3vot_A 1 MTKRN-KNLAIICQNKHLP-----FIFEEAERLGLKVTFFYNSAE--DFPGN----------LPAVERCVPLPL------ 56 (425)
T ss_dssp -CCCC-CEEEEECCCTTCC-----HHHHHHHHTTCEEEEEEETTS--CCCCS----------CTTEEEEEEECT------
T ss_pred CCCCC-cEEEEECCChhHH-----HHHHHHHHCCCEEEEEECCCc--ccccC----------HhhccEEEecCC------
Confidence 55543 3888887654322 245777778999999875431 11110 0011 3333331
Q ss_pred CCCCCChHHHHHHHHhhCcHHHHHHHHcCCCCceEEEe--cCCcccHHHHHHHhCCce
Q 011848 80 PRTPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIIT--DGYMSRAIDAAREVGVSI 135 (476)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~D~Ii~--D~~~~~~~~~A~~lgiP~ 135 (476)
..+....+ ..+.++.++. ++|.|++ |.....+..+++.+|+|.
T Consensus 57 ---~~d~~~~~--------~~~~~~~~~~--~id~V~~~~e~~~~~~a~l~e~lglpg 101 (425)
T 3vot_A 57 ---FEDEEAAM--------DVVRQTFVEF--PFDGVMTLFEPALPFTAKAAEALNLPG 101 (425)
T ss_dssp ---TTCHHHHH--------HHHHHHHHHS--CCSEEECCCGGGHHHHHHHHHHTTCSS
T ss_pred ---CCCHHHHH--------HHHHHhhhhc--CCCEEEECCchhHHHHHHHHHHcCCCC
Confidence 11112221 2344555554 8999984 433445677889999994
No 83
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=73.03 E-value=2.6 Score=39.08 Aligned_cols=134 Identities=10% Similarity=-0.017 Sum_probs=76.3
Q ss_pred CCceEEEEecccc---cCCHHHHHHHHHHHhhCCCcEEEEEcCCCCCCCCCCCCCchHHHHHhcCCceeeeccC---HHH
Q 011848 282 KQSVIYVSFGSIA---VMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVP---QEE 355 (476)
Q Consensus 282 ~~~~V~vs~Gs~~---~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~vp---~~~ 355 (476)
+++.|.+..|+.. ..+.+.+.++++.+.+.++++++..+.+ .+....+.+.+.. +++.+.+-.+ -.+
T Consensus 177 ~~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~------~e~~~~~~i~~~~-~~~~l~g~~sl~el~a 249 (326)
T 2gt1_A 177 AGEYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAP------HEEERAKRLAEGF-AYVEVLPKMSLEGVAR 249 (326)
T ss_dssp TTSEEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSH------HHHHHHHHHHTTC-TTEEECCCCCHHHHHH
T ss_pred CCCEEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCH------HHHHHHHHHHhhC-CcccccCCCCHHHHHH
Confidence 5678888888754 5677788888888877677776654311 0001111111111 2343333322 355
Q ss_pred HhCcCCCCccccccChhHHHHHHHhCCceecc--ccccchhhhhHhhhcceeeeEE---ec-cccCHHHHHHHHHHHHhH
Q 011848 356 VLAHSAVGGFLTHCGWNSTLESIVAGMPMICW--PSFADQQINSRFVGEVWKLGLD---IK-DLCDRNIVEKAVNDLMVE 429 (476)
Q Consensus 356 ll~~~~~~~~I~HgG~gs~~eal~~GvP~l~~--P~~~DQ~~na~r~~e~~G~g~~---~~-~~~~~~~l~~ai~~~l~~ 429 (476)
++.++++ +|+.= .|+++=|.+.|+|+|++ |..... ++-.- +. ..-+. -. ..++.+++.+++.++|++
T Consensus 250 li~~a~l--~I~~D-SG~~HlAaa~g~P~v~lfg~t~p~~--~~P~~-~~-~~~~~~~~~cm~~I~~~~V~~~i~~~l~~ 322 (326)
T 2gt1_A 250 VLAGAKF--VVSVD-TGLSHLTAALDRPNITVYGPTDPGL--IGGYG-KN-QMVCRAPGNELSQLTANAVKQFIEENAEK 322 (326)
T ss_dssp HHHTCSE--EEEES-SHHHHHHHHTTCCEEEEESSSCHHH--HCCCS-SS-EEEEECGGGCGGGCCHHHHHHHHHHTTTT
T ss_pred HHHhCCE--EEecC-CcHHHHHHHcCCCEEEEECCCChhh--cCCCC-CC-ceEecCCcccccCCCHHHHHHHHHHHHHH
Confidence 8899997 99882 33444477799999988 321111 11110 00 01011 11 478999999999999873
No 84
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=71.50 E-value=7.5 Score=30.67 Aligned_cols=40 Identities=8% Similarity=-0.004 Sum_probs=30.5
Q ss_pred ccEEEEEcC-C--CccCHHHHHHHHHHHHhCCCEEEEEeCccc
Q 011848 6 HVHVAILPL-P--AVGHVNSMLNLAELLGHAGIKITFLNTEHY 45 (476)
Q Consensus 6 ~~~il~~~~-~--~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~ 45 (476)
+.|++|+.. + +.......+.+|...+..||+|+++-....
T Consensus 15 ~~kl~ii~~sgP~~~~~~~~al~lA~~A~a~g~eV~vFf~~dG 57 (134)
T 3mc3_A 15 XXXILIVVTHGPEDLDRTYAPLFMASISASMEYETSVFFMIXG 57 (134)
T ss_dssp CCEEEEEECCCGGGTHHHHHHHHHHHHHHHTTCEEEEEECTTG
T ss_pred cceEEEEEccCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEeCc
Confidence 457765544 4 456777899999999999999999887553
No 85
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=71.18 E-value=2.4 Score=39.67 Aligned_cols=42 Identities=24% Similarity=0.203 Sum_probs=31.8
Q ss_pred CCccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCccchhhHh
Q 011848 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVI 50 (476)
Q Consensus 4 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~ 50 (476)
|++|||+|+-.|+.| ..+|..|++.||+|+++......+.+.
T Consensus 1 M~~mkI~IiGaG~~G-----~~~a~~L~~~g~~V~~~~r~~~~~~~~ 42 (335)
T 3ghy_A 1 MSLTRICIVGAGAVG-----GYLGARLALAGEAINVLARGATLQALQ 42 (335)
T ss_dssp -CCCCEEEESCCHHH-----HHHHHHHHHTTCCEEEECCHHHHHHHH
T ss_pred CCCCEEEEECcCHHH-----HHHHHHHHHCCCEEEEEEChHHHHHHH
Confidence 346799999888887 457899999999999998744334443
No 86
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=70.89 E-value=19 Score=32.27 Aligned_cols=39 Identities=23% Similarity=0.350 Sum_probs=31.7
Q ss_pred ccEEEEEcC--CCccCHHHHHHHHHHHHhCCCEEEEEeCcc
Q 011848 6 HVHVAILPL--PAVGHVNSMLNLAELLGHAGIKITFLNTEH 44 (476)
Q Consensus 6 ~~~il~~~~--~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (476)
.+|+++++. |+-|-..-...||..|+++|.+|.++-...
T Consensus 81 ~~kvI~vts~kgG~GKTt~a~nLA~~lA~~G~rVLLID~D~ 121 (271)
T 3bfv_A 81 AVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGDM 121 (271)
T ss_dssp CCCEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCS
T ss_pred CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 456665554 678999999999999999999999997643
No 87
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=70.57 E-value=17 Score=35.76 Aligned_cols=109 Identities=16% Similarity=0.111 Sum_probs=65.5
Q ss_pred cee-eeccCHHH---HhCcCCCCcccc---ccChh-HHHHHHHhCC-----ceeccccccchhhhhHhhhcceeeeEEec
Q 011848 345 GCI-AGWVPQEE---VLAHSAVGGFLT---HCGWN-STLESIVAGM-----PMICWPSFADQQINSRFVGEVWKLGLDIK 411 (476)
Q Consensus 345 v~~-~~~vp~~~---ll~~~~~~~~I~---HgG~g-s~~eal~~Gv-----P~l~~P~~~DQ~~na~r~~e~~G~g~~~~ 411 (476)
+.+ .+++++.+ ++..+++ ||. .=|+| ++.||+++|+ |+|+--+.+ .+..+ .-|+.+
T Consensus 333 v~~~~g~v~~~el~~ly~~ADv--~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G----~~~~l----~~g~lv- 401 (482)
T 1uqt_A 333 LYYLNQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAG----AANEL----TSALIV- 401 (482)
T ss_dssp EEEECSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBG----GGGTC----TTSEEE-
T ss_pred EEEeCCCCCHHHHHHHHHHccE--EEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCC----CHHHh----CCeEEE-
Confidence 443 47888654 6778887 553 33555 8999999998 555543221 11112 234445
Q ss_pred cccCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHh
Q 011848 412 DLCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIKMM 469 (476)
Q Consensus 412 ~~~~~~~l~~ai~~~l~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~i~~l~~~ 469 (476)
...+.++++++|.++|++....-+++.++..+.+++ -+....++.+++.+...
T Consensus 402 ~p~d~~~lA~ai~~lL~~~~~~r~~~~~~~~~~v~~-----~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 402 NPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVK-----NDINHWQECFISDLKQI 454 (482)
T ss_dssp CTTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHS
T ss_pred CCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh-----CCHHHHHHHHHHHHHhc
Confidence 335789999999999983112233344444444433 34566778888888665
No 88
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=70.22 E-value=4.7 Score=36.36 Aligned_cols=35 Identities=26% Similarity=0.246 Sum_probs=26.5
Q ss_pred CCccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCc
Q 011848 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTE 43 (476)
Q Consensus 4 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 43 (476)
|+||||++. |+ | .--..|++.|.++||+|+.++-.
T Consensus 1 M~~~~ilVt--Ga-G--~iG~~l~~~L~~~g~~V~~~~r~ 35 (286)
T 3gpi_A 1 MSLSKILIA--GC-G--DLGLELARRLTAQGHEVTGLRRS 35 (286)
T ss_dssp -CCCCEEEE--CC-S--HHHHHHHHHHHHTTCCEEEEECT
T ss_pred CCCCcEEEE--CC-C--HHHHHHHHHHHHCCCEEEEEeCC
Confidence 456788877 35 7 44668899999999999999753
No 89
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=70.13 E-value=4.5 Score=34.60 Aligned_cols=40 Identities=23% Similarity=0.093 Sum_probs=33.5
Q ss_pred CccEEEEEcCCCccCHH-HHHHHHHHHHhCCCEEEEEeCccc
Q 011848 5 DHVHVAILPLPAVGHVN-SMLNLAELLGHAGIKITFLNTEHY 45 (476)
Q Consensus 5 ~~~~il~~~~~~~GH~~-p~l~La~~L~~rGH~Vt~~~~~~~ 45 (476)
++.||++.-.|+ +..+ =.+.|.+.|+++|++|.++.++..
T Consensus 6 ~~k~I~lgiTGs-~aa~~k~~~ll~~L~~~g~eV~vv~T~~A 46 (201)
T 3lqk_A 6 AGKHVGFGLTGS-HCTYHEVLPQMERLVELGAKVTPFVTHTV 46 (201)
T ss_dssp TTCEEEEECCSC-GGGGGGTHHHHHHHHHTTCEEEEECSSCS
T ss_pred CCCEEEEEEECh-HHHHHHHHHHHHHHhhCCCEEEEEEChhH
Confidence 355899988888 4555 789999999999999999998763
No 90
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=70.03 E-value=4.4 Score=33.30 Aligned_cols=46 Identities=17% Similarity=0.242 Sum_probs=38.2
Q ss_pred CccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCccchhhHh
Q 011848 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVI 50 (476)
Q Consensus 5 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~ 50 (476)
+..||++.+.++-+|-....-++..|..+|++|.++......+.+.
T Consensus 17 ~~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~~p~e~lv 62 (161)
T 2yxb_A 17 RRYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLRQTPEQVA 62 (161)
T ss_dssp CSCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSBCCHHHHH
T ss_pred CCCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHH
Confidence 3569999999999999999999999999999999987544344443
No 91
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=69.96 E-value=6.5 Score=34.77 Aligned_cols=41 Identities=12% Similarity=0.146 Sum_probs=29.3
Q ss_pred CCccEEEEEcCCCcc----------CH-HHHHHHHHHHHhCCCEEEEEeCcc
Q 011848 4 QDHVHVAILPLPAVG----------HV-NSMLNLAELLGHAGIKITFLNTEH 44 (476)
Q Consensus 4 ~~~~~il~~~~~~~G----------H~-~p~l~La~~L~~rGH~Vt~~~~~~ 44 (476)
|.|.||+|+.....+ -. .=++.-.+.|.+.|++|+++++..
T Consensus 1 m~m~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~iaS~~g 52 (244)
T 3kkl_A 1 MTPKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSETG 52 (244)
T ss_dssp --CCEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCCCEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 457799998886422 22 346777889999999999999753
No 92
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=69.58 E-value=7.9 Score=34.33 Aligned_cols=33 Identities=18% Similarity=0.212 Sum_probs=25.5
Q ss_pred CCceEEE-ecCCcc-cHHHHHHHhCCceEEEecch
Q 011848 110 SPVNCII-TDGYMS-RAIDAAREVGVSIIYFRTIS 142 (476)
Q Consensus 110 ~~~D~Ii-~D~~~~-~~~~~A~~lgiP~v~~~~~~ 142 (476)
..||+|| .|+..- .+..=|.++|||+|.++-+.
T Consensus 157 ~~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivDTn 191 (256)
T 2vqe_B 157 RLPDAIFVVDPTKEAIAVREARKLFIPVIALADTD 191 (256)
T ss_dssp SCCSEEEESCTTTTHHHHHHHHHTTCCCEECCCTT
T ss_pred cCCCEEEEeCCccchHHHHHHHHcCCCEEEEecCC
Confidence 5888877 676443 67777999999999987664
No 93
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=69.33 E-value=9.2 Score=33.87 Aligned_cols=39 Identities=15% Similarity=0.117 Sum_probs=29.8
Q ss_pred ccEEEEEcCCCc----------cC-HHHHHHHHHHHHhCCCEEEEEeCcc
Q 011848 6 HVHVAILPLPAV----------GH-VNSMLNLAELLGHAGIKITFLNTEH 44 (476)
Q Consensus 6 ~~~il~~~~~~~----------GH-~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (476)
|.||+++..... |- ..=++.--..|.+.|++|+++++..
T Consensus 9 mkkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~~aSp~g 58 (247)
T 3n7t_A 9 PRKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAAGFEVDVASETG 58 (247)
T ss_dssp CSEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 569999887742 22 4447777889999999999999743
No 94
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=68.50 E-value=5.2 Score=36.28 Aligned_cols=41 Identities=15% Similarity=0.220 Sum_probs=32.3
Q ss_pred CCccEEEEEcC--CCccCHHHHHHHHHHHHhCCCEEEEEeCcc
Q 011848 4 QDHVHVAILPL--PAVGHVNSMLNLAELLGHAGIKITFLNTEH 44 (476)
Q Consensus 4 ~~~~~il~~~~--~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (476)
|+|+|++.+.. |+-|-..-...||..|+++|++|.++-...
T Consensus 1 M~M~kvI~v~s~KGGvGKTT~a~nLA~~La~~G~~VlliD~D~ 43 (286)
T 2xj4_A 1 MAETRVIVVGNEKGGAGKSTIAVHLVTALLYGGAKVAVIDLDL 43 (286)
T ss_dssp ---CEEEEECCSSSCTTHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCCCeEEEEEcCCCCCCHHHHHHHHHHHHHHCCCcEEEEECCC
Confidence 45777766654 688999999999999999999999987654
No 95
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=68.32 E-value=20 Score=30.87 Aligned_cols=34 Identities=6% Similarity=0.187 Sum_probs=24.1
Q ss_pred ccEEEEEcCCCccCHHHHHHHHHHHHhCCC--EEEEEeC
Q 011848 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGI--KITFLNT 42 (476)
Q Consensus 6 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH--~Vt~~~~ 42 (476)
|+||+|+.+|+.. -+.++.++|.+.+| +|..+.+
T Consensus 1 m~rI~vl~SG~g~---~~~~~l~~l~~~~~~~~i~~Vvs 36 (216)
T 2ywr_A 1 MLKIGVLVSGRGS---NLQAIIDAIESGKVNASIELVIS 36 (216)
T ss_dssp CEEEEEEECSCCH---HHHHHHHHHHTTSSCEEEEEEEE
T ss_pred CCEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEe
Confidence 5699999777653 36677788888888 7654443
No 96
>1uan_A Hypothetical protein TT1542; rossmann-like, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.00A {Thermus thermophilus} SCOP: c.134.1.1
Probab=68.00 E-value=13 Score=32.40 Aligned_cols=35 Identities=11% Similarity=0.109 Sum_probs=21.4
Q ss_pred ccEE-EEEcCCCccCHHHHHHHHHHHHhCCCEEEEEe
Q 011848 6 HVHV-AILPLPAVGHVNSMLNLAELLGHAGIKITFLN 41 (476)
Q Consensus 6 ~~~i-l~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~ 41 (476)
|++| +|.++|-- -..-+-.+...++++|++|++++
T Consensus 1 m~~vL~v~aHPDD-e~l~~ggtia~~~~~G~~v~vv~ 36 (227)
T 1uan_A 1 MLDLLVVAPHPDD-GELGCGGTLARAKAEGLSTGILD 36 (227)
T ss_dssp CEEEEEEESSTTH-HHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CceEEEEEeCCCc-HHHhHHHHHHHHHhCCCcEEEEE
Confidence 4555 45555543 33444455556678999987775
No 97
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=67.72 E-value=7 Score=29.70 Aligned_cols=40 Identities=13% Similarity=0.075 Sum_probs=29.0
Q ss_pred ccEEEEEcCC---CccCHHHHHHHHHHHHhC-CC-EEEEEeCccc
Q 011848 6 HVHVAILPLP---AVGHVNSMLNLAELLGHA-GI-KITFLNTEHY 45 (476)
Q Consensus 6 ~~~il~~~~~---~~GH~~p~l~La~~L~~r-GH-~Vt~~~~~~~ 45 (476)
|+|++|+-.. +.......+.+|..+.+. || +|+++-....
T Consensus 1 M~k~~ii~~~~p~~~~~~~~al~~a~~~~~~~g~~~v~vff~~dg 45 (117)
T 1jx7_A 1 MQKIVIVANGAPYGSESLFNSLRLAIALREQESNLDLRLFLMSDA 45 (117)
T ss_dssp CCEEEEEECCCTTTCSHHHHHHHHHHHHHHHCTTCEEEEEECGGG
T ss_pred CcEEEEEEcCCCCCcHHHHHHHHHHHHHHhcCCCccEEEEEEchH
Confidence 3456555443 345567789999999999 99 9999987553
No 98
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=67.51 E-value=22 Score=32.36 Aligned_cols=38 Identities=16% Similarity=0.341 Sum_probs=31.0
Q ss_pred cEEEEEcC--CCccCHHHHHHHHHHHHhCCCEEEEEeCcc
Q 011848 7 VHVAILPL--PAVGHVNSMLNLAELLGHAGIKITFLNTEH 44 (476)
Q Consensus 7 ~~il~~~~--~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (476)
+|+++++. |+-|-..-...||..|+++|.+|.++-...
T Consensus 104 ~kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D~ 143 (299)
T 3cio_A 104 NNILMITGATPDSGKTFVSSTLAAVIAQSDQKVLFIDADL 143 (299)
T ss_dssp CCEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CeEEEEECCCCCCChHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 45555544 678999999999999999999999997644
No 99
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=67.44 E-value=6 Score=32.94 Aligned_cols=40 Identities=13% Similarity=0.032 Sum_probs=33.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCccchh
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYD 47 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~ 47 (476)
.||++.-.|+.|=.. ...+.+.|+++|++|.++.++.-.+
T Consensus 6 k~IllgvTGs~aa~k-~~~ll~~L~~~g~~V~vv~T~~A~~ 45 (175)
T 3qjg_A 6 ENVLICLCGSVNSIN-ISHYIIELKSKFDEVNVIASTNGRK 45 (175)
T ss_dssp CEEEEEECSSGGGGG-HHHHHHHHTTTCSEEEEEECTGGGG
T ss_pred CEEEEEEeCHHHHHH-HHHHHHHHHHCCCEEEEEECcCHHH
Confidence 489888888876664 8899999999999999999876443
No 100
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=67.35 E-value=5.3 Score=35.02 Aligned_cols=39 Identities=3% Similarity=-0.101 Sum_probs=27.1
Q ss_pred CCCCCccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 1 MEKQDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 1 m~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
|..|.+.|+++++..+.| --.++++.|+++|++|.++.-
T Consensus 1 M~~~~~~k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r 39 (241)
T 1dhr_A 1 MAASGEARRVLVYGGRGA---LGSRCVQAFRARNWWVASIDV 39 (241)
T ss_dssp -----CCCEEEEETTTSH---HHHHHHHHHHTTTCEEEEEES
T ss_pred CCccCCCCEEEEECCCcH---HHHHHHHHHHhCCCEEEEEeC
Confidence 666655677888877654 457899999999999998864
No 101
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=67.34 E-value=31 Score=31.88 Aligned_cols=32 Identities=13% Similarity=0.054 Sum_probs=22.6
Q ss_pred ccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 6 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
+|||+|+. --+....+.++|.++||+|..+.+
T Consensus 22 ~mrIvf~G-----~~~fa~~~L~~L~~~~~~i~~Vvt 53 (329)
T 2bw0_A 22 SMKIAVIG-----QSLFGQEVYCHLRKEGHEVVGVFT 53 (329)
T ss_dssp CCEEEEEC-----CHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCEEEEEc-----CcHHHHHHHHHHHHCCCeEEEEEe
Confidence 37999992 223444577899999999876654
No 102
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=67.31 E-value=85 Score=30.45 Aligned_cols=147 Identities=10% Similarity=0.003 Sum_probs=76.1
Q ss_pred CCCceEEEEecccccCCHHHHHHHHHHHhhCCCcEEEEEcCCCCCCCCCCCCCchHHHHHhc-CCceee-eccCHHHHhC
Q 011848 281 PKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATK-ERGCIA-GWVPQEEVLA 358 (476)
Q Consensus 281 ~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~nv~~~-~~vp~~~ll~ 358 (476)
.+++++.|..|... ...+..|.+.+.++.++-.. +.+.+.+-.. .++.+. +-.. ...|.
T Consensus 11 ~~~~vlVvGgG~va-------~~k~~~L~~~ga~V~vi~~~-----------~~~~~~~l~~~~~i~~~~~~~~-~~~l~ 71 (457)
T 1pjq_A 11 RDRDCLIVGGGDVA-------ERKARLLLEAGARLTVNALT-----------FIPQFTVWANEGMLTLVEGPFD-ETLLD 71 (457)
T ss_dssp BTCEEEEECCSHHH-------HHHHHHHHHTTBEEEEEESS-----------CCHHHHHHHTTTSCEEEESSCC-GGGGT
T ss_pred CCCEEEEECCCHHH-------HHHHHHHHhCcCEEEEEcCC-----------CCHHHHHHHhcCCEEEEECCCC-ccccC
Confidence 36888888888765 44456666788887766631 2233322111 344443 2222 23455
Q ss_pred cCCCCccccccChhH-----HHHHHHhCCce--eccccccchhhhhHhhhcceeeeEEec-cccC-HHHHHHHHHHHHhH
Q 011848 359 HSAVGGFLTHCGWNS-----TLESIVAGMPM--ICWPSFADQQINSRFVGEVWKLGLDIK-DLCD-RNIVEKAVNDLMVE 429 (476)
Q Consensus 359 ~~~~~~~I~HgG~gs-----~~eal~~GvP~--l~~P~~~DQ~~na~r~~e~~G~g~~~~-~~~~-~~~l~~ai~~~l~~ 429 (476)
.+++ +|.--|.-. ..+|-..|+|+ +--|-..|...-|..-...+-+|+.=. +..+ +..|++.|...+.+
T Consensus 72 ~~~l--Vi~at~~~~~n~~i~~~a~~~~i~vn~~d~~e~~~~~~pa~~~~~~l~iaIsT~Gksp~la~~ir~~ie~~l~~ 149 (457)
T 1pjq_A 72 SCWL--AIAATDDDTVNQRVSDAAESRRIFCNVVDAPKAASFIMPSIIDRSPLMVAVSSGGTSPVLARLLREKLESLLPQ 149 (457)
T ss_dssp TCSE--EEECCSCHHHHHHHHHHHHHTTCEEEETTCTTSSSEECCEEEEETTEEEEEECTTSCHHHHHHHHHHHHHHSCT
T ss_pred CccE--EEEcCCCHHHHHHHHHHHHHcCCEEEECCCcccCceEeeeEEEeCCeEEEEECCCCChHHHHHHHHHHHHhcch
Confidence 6665 777777654 33455668886 333333333221111111234555522 3222 56777777777653
Q ss_pred hHHHHHHHHHHHHHHHHHH
Q 011848 430 RKEEFMESADRMANLAKKS 448 (476)
Q Consensus 430 ~~~~~~~~a~~l~~~~~~~ 448 (476)
+-..+.+.+.++.+++++.
T Consensus 150 ~~~~~~~~~~~~R~~~~~~ 168 (457)
T 1pjq_A 150 HLGQVARYAGQLRARVKKQ 168 (457)
T ss_dssp THHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhh
Confidence 2234555566666666554
No 103
>2ixd_A LMBE-related protein; hexamer, deacetylase, rossman fold, zinc-dependent metalloenzyme, hydrolase; 1.8A {Bacillus cereus}
Probab=67.00 E-value=13 Score=32.68 Aligned_cols=33 Identities=9% Similarity=-0.026 Sum_probs=21.7
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEe
Q 011848 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLN 41 (476)
Q Consensus 8 ~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~ 41 (476)
-++|.++|-- -..-+-.....++++|++|++++
T Consensus 6 vL~v~aHPDD-e~l~~Ggtia~~~~~G~~V~vv~ 38 (242)
T 2ixd_A 6 ILAFGAHADD-VEIGMAGTIAKYTKQGYEVGICD 38 (242)
T ss_dssp EEEEESSTTH-HHHHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEEeCCCh-HHHhHHHHHHHHHHCCCeEEEEE
Confidence 3466666654 34445555567778999988886
No 104
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=66.55 E-value=5.9 Score=35.98 Aligned_cols=32 Identities=22% Similarity=0.371 Sum_probs=23.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
|||++. |+.|.+ --.|++.|.++||+|+.++-
T Consensus 1 MkILVT--GatGfI--G~~L~~~L~~~G~~V~~l~R 32 (298)
T 4b4o_A 1 MRVLVG--GGTGFI--GTALTQLLNARGHEVTLVSR 32 (298)
T ss_dssp CEEEEE--TTTSHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEE--CCCCHH--HHHHHHHHHHCCCEEEEEEC
Confidence 587654 445544 35689999999999999874
No 105
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=65.42 E-value=7.8 Score=33.28 Aligned_cols=46 Identities=11% Similarity=0.035 Sum_probs=39.1
Q ss_pred ccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCccchhhHhh
Q 011848 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIR 51 (476)
Q Consensus 6 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~ 51 (476)
..||++.+.++-.|-....-++..|..+|++|.+++.....+.+.+
T Consensus 88 ~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~vp~~~l~~ 133 (210)
T 1y80_A 88 VGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVDIEPGKFVE 133 (210)
T ss_dssp CCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSSBCHHHHHH
T ss_pred CCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHH
Confidence 4589999999999999999999999999999999887554454443
No 106
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=65.20 E-value=13 Score=28.02 Aligned_cols=39 Identities=3% Similarity=0.038 Sum_probs=31.2
Q ss_pred CCccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 4 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
|.|+||+++|..+.|-=.-.-.+-+.+.++|.++.+-..
T Consensus 1 M~mkkIll~Cg~G~sTS~l~~k~~~~~~~~gi~~~i~a~ 39 (106)
T 1e2b_A 1 MEKKHIYLFSSAGMSTSLLVSKMRAQAEKYEVPVIIEAF 39 (106)
T ss_dssp CCCEEEEEECSSSTTTHHHHHHHHHHHHHSCCSEEEEEE
T ss_pred CCCcEEEEECCCchhHHHHHHHHHHHHHHCCCCeEEEEe
Confidence 457799999998777666666888889999998876654
No 107
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=64.88 E-value=3.3 Score=32.65 Aligned_cols=37 Identities=16% Similarity=0.268 Sum_probs=24.9
Q ss_pred CCCCCccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 1 MEKQDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 1 m~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
|.+.+|.||+++-.+..| ..+++.|.+.||+|+++..
T Consensus 1 m~~~~~~~v~I~G~G~iG-----~~~a~~l~~~g~~v~~~d~ 37 (144)
T 2hmt_A 1 MGRIKNKQFAVIGLGRFG-----GSIVKELHRMGHEVLAVDI 37 (144)
T ss_dssp -----CCSEEEECCSHHH-----HHHHHHHHHTTCCCEEEES
T ss_pred CCCCcCCcEEEECCCHHH-----HHHHHHHHHCCCEEEEEeC
Confidence 555556688888654444 5678999999999998875
No 108
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=64.84 E-value=3.9 Score=37.89 Aligned_cols=38 Identities=24% Similarity=0.331 Sum_probs=27.4
Q ss_pred CCCCCccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCc
Q 011848 1 MEKQDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTE 43 (476)
Q Consensus 1 m~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 43 (476)
|.+|.+.||.|+-.|..| ..+|..|+++||+|++....
T Consensus 1 m~~~~~~kI~vIGaG~MG-----~~iA~~la~~G~~V~l~d~~ 38 (319)
T 2dpo_A 1 MASPAAGDVLIVGSGLVG-----RSWAMLFASGGFRVKLYDIE 38 (319)
T ss_dssp ------CEEEEECCSHHH-----HHHHHHHHHTTCCEEEECSC
T ss_pred CCCCCCceEEEEeeCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 777777899999888777 46789999999999998753
No 109
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=64.56 E-value=4.4 Score=37.13 Aligned_cols=33 Identities=24% Similarity=0.445 Sum_probs=26.5
Q ss_pred CccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 5 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
.||||+|+-.|..|. .+|..|+++||+|+++..
T Consensus 2 ~~m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~r 34 (316)
T 2ew2_A 2 NAMKIAIAGAGAMGS-----RLGIMLHQGGNDVTLIDQ 34 (316)
T ss_dssp --CEEEEECCSHHHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCCeEEEECcCHHHH-----HHHHHHHhCCCcEEEEEC
Confidence 367999998877764 578999999999999875
No 110
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=64.17 E-value=3.6 Score=38.00 Aligned_cols=36 Identities=11% Similarity=0.206 Sum_probs=27.1
Q ss_pred CCCCccEEEEEcCCCccCHHHHHHHHHHHHhCCC-EEEEEeC
Q 011848 2 EKQDHVHVAILPLPAVGHVNSMLNLAELLGHAGI-KITFLNT 42 (476)
Q Consensus 2 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH-~Vt~~~~ 42 (476)
.++.||||.|+-.|..| ..+|+.|++.|| +|++...
T Consensus 20 ~~~~~~~I~iIG~G~mG-----~~~A~~L~~~G~~~V~~~dr 56 (312)
T 3qsg_A 20 FQSNAMKLGFIGFGEAA-----SAIASGLRQAGAIDMAAYDA 56 (312)
T ss_dssp -----CEEEEECCSHHH-----HHHHHHHHHHSCCEEEEECS
T ss_pred ccCCCCEEEEECccHHH-----HHHHHHHHHCCCCeEEEEcC
Confidence 34457899999888777 478999999999 9998876
No 111
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=63.64 E-value=10 Score=34.92 Aligned_cols=35 Identities=14% Similarity=0.194 Sum_probs=27.3
Q ss_pred CCCccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 3 KQDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 3 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
+++||||+|+-.|..+ ....++|.++||+|..+.+
T Consensus 1 ~~~mmrIvf~Gtp~fa-----~~~L~~L~~~~~~v~~Vvt 35 (317)
T 3rfo_A 1 SNAMIKVVFMGTPDFS-----VPVLRRLIEDGYDVIGVVT 35 (317)
T ss_dssp CCTTSEEEEECCSTTH-----HHHHHHHHHTTCEEEEEEC
T ss_pred CCCceEEEEEeCCHHH-----HHHHHHHHHCCCcEEEEEe
Confidence 4679999999888654 3456788889999887765
No 112
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=63.47 E-value=9.8 Score=33.93 Aligned_cols=44 Identities=16% Similarity=0.014 Sum_probs=37.4
Q ss_pred ccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCccchhhH
Q 011848 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRV 49 (476)
Q Consensus 6 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~ 49 (476)
..||++.+.++-.|-....-++..|..+|++|.+++..-..+.+
T Consensus 123 ~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~vp~e~l 166 (258)
T 2i2x_B 123 KGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRDVPAEEV 166 (258)
T ss_dssp SCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEECCSHHH
T ss_pred CCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHHHH
Confidence 45999999999999999999999999999999988754333433
No 113
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=62.95 E-value=5.6 Score=32.05 Aligned_cols=34 Identities=15% Similarity=0.180 Sum_probs=26.1
Q ss_pred CccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCc
Q 011848 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTE 43 (476)
Q Consensus 5 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 43 (476)
...||+++-. |++- ..+++.|.++||+|+++...
T Consensus 2 ~~~~vlI~G~---G~vG--~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 2 RKDHFIVCGH---SILA--INTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CCSCEEEECC---SHHH--HHHHHHHHHTTCCEEEEECC
T ss_pred CCCcEEEECC---CHHH--HHHHHHHHHCCCCEEEEECC
Confidence 3458888844 4433 78899999999999999873
No 114
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=62.51 E-value=7 Score=36.04 Aligned_cols=43 Identities=23% Similarity=0.278 Sum_probs=38.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhC--CCEEEEEeCccchhhH
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHA--GIKITFLNTEHYYDRV 49 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~r--GH~Vt~~~~~~~~~~~ 49 (476)
|||+++-..+.|++.-...+.++|+++ +.+|++++.+.+.+.+
T Consensus 1 ~~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l~ 45 (326)
T 2gt1_A 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQIP 45 (326)
T ss_dssp CEEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEGGGTHHH
T ss_pred CeEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEehhhhHHH
Confidence 599999999999999999999999998 9999999998765544
No 115
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=62.41 E-value=7.6 Score=33.29 Aligned_cols=40 Identities=8% Similarity=-0.061 Sum_probs=31.8
Q ss_pred CccEEEEEcCCCccCHHH-HHHHHHHHHhCCCEEEEEeCccc
Q 011848 5 DHVHVAILPLPAVGHVNS-MLNLAELLGHAGIKITFLNTEHY 45 (476)
Q Consensus 5 ~~~~il~~~~~~~GH~~p-~l~La~~L~~rGH~Vt~~~~~~~ 45 (476)
+..||++.-.|+ +..+- ...|.+.|+++|++|.++.++..
T Consensus 4 ~~k~IllgiTGs-iaayk~~~~ll~~L~~~g~eV~vv~T~~A 44 (207)
T 3mcu_A 4 KGKRIGFGFTGS-HCTYEEVMPHLEKLIAEGAEVRPVVSYTV 44 (207)
T ss_dssp TTCEEEEEECSC-GGGGTTSHHHHHHHHHTTCEEEEEECC--
T ss_pred CCCEEEEEEECh-HHHHHHHHHHHHHHHhCCCEEEEEEehHH
Confidence 345898888887 45665 88999999999999999998763
No 116
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=62.19 E-value=6.2 Score=35.75 Aligned_cols=32 Identities=16% Similarity=0.220 Sum_probs=26.1
Q ss_pred ccEEEEEcC-CCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 6 HVHVAILPL-PAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 6 ~~~il~~~~-~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
||||+|+-. |..| ..+|+.|+++||+|+++..
T Consensus 11 mm~I~iIG~tG~mG-----~~la~~l~~~g~~V~~~~r 43 (286)
T 3c24_A 11 PKTVAILGAGGKMG-----ARITRKIHDSAHHLAAIEI 43 (286)
T ss_dssp CCEEEEETTTSHHH-----HHHHHHHHHSSSEEEEECC
T ss_pred CCEEEEECCCCHHH-----HHHHHHHHhCCCEEEEEEC
Confidence 569999987 7776 4678899999999997764
No 117
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=62.02 E-value=8.3 Score=35.62 Aligned_cols=33 Identities=24% Similarity=0.316 Sum_probs=28.4
Q ss_pred CccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 5 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
.+|||.|+-.|..| ..+|+.|+++||+|+++..
T Consensus 30 ~~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr 62 (320)
T 4dll_A 30 YARKITFLGTGSMG-----LPMARRLCEAGYALQVWNR 62 (320)
T ss_dssp CCSEEEEECCTTTH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCCEEEEECccHHH-----HHHHHHHHhCCCeEEEEcC
Confidence 46799999888888 6688999999999998864
No 118
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=60.98 E-value=10 Score=32.55 Aligned_cols=43 Identities=12% Similarity=0.097 Sum_probs=34.8
Q ss_pred CccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCccchhhH
Q 011848 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRV 49 (476)
Q Consensus 5 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~ 49 (476)
++.||++...|+.+-.. ...|.+.|.++| +|.++.++.....+
T Consensus 18 ~~k~IllgvTGsiaa~k-~~~ll~~L~~~g-~V~vv~T~~A~~fv 60 (209)
T 1mvl_A 18 RKPRVLLAASGSVAAIK-FGNLCHCFTEWA-EVRAVVTKSSLHFL 60 (209)
T ss_dssp -CCEEEEEECSSGGGGG-HHHHHHHHHTTS-EEEEEECTGGGGTC
T ss_pred CCCEEEEEEeCcHHHHH-HHHHHHHHhcCC-CEEEEEcchHHHhc
Confidence 34699999999988766 899999999999 99999987644333
No 119
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=60.92 E-value=12 Score=32.56 Aligned_cols=39 Identities=23% Similarity=0.284 Sum_probs=35.5
Q ss_pred ccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCcc
Q 011848 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEH 44 (476)
Q Consensus 6 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (476)
+++|++..-|+.|-..-++.+|..|+++|++|.++....
T Consensus 6 ~l~I~~~~kgGvGKTt~a~~la~~l~~~G~~V~v~d~D~ 44 (228)
T 2r8r_A 6 RLKVFLGAAPGVGKTYAMLQAAHAQLRQGVRVMAGVVET 44 (228)
T ss_dssp CEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred eEEEEEECCCCCcHHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 578999999999999999999999999999998887654
No 120
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=60.90 E-value=3.1 Score=38.30 Aligned_cols=41 Identities=15% Similarity=0.379 Sum_probs=30.3
Q ss_pred ccEEEEEcCCCccCHHHHHHHHHHHHhC-----C-CEEEEEeCccchhhHhh
Q 011848 6 HVHVAILPLPAVGHVNSMLNLAELLGHA-----G-IKITFLNTEHYYDRVIR 51 (476)
Q Consensus 6 ~~~il~~~~~~~GH~~p~l~La~~L~~r-----G-H~Vt~~~~~~~~~~~~~ 51 (476)
||||+|+-.|..|. .+|..|+++ | |+|+++..+...+.+.+
T Consensus 8 ~m~I~iiG~G~mG~-----~~a~~L~~~~~~~~g~~~V~~~~r~~~~~~l~~ 54 (317)
T 2qyt_A 8 PIKIAVFGLGGVGG-----YYGAMLALRAAATDGLLEVSWIARGAHLEAIRA 54 (317)
T ss_dssp CEEEEEECCSHHHH-----HHHHHHHHHHHHTTSSEEEEEECCHHHHHHHHH
T ss_pred CCEEEEECcCHHHH-----HHHHHHHhCccccCCCCCEEEEEcHHHHHHHHh
Confidence 47999999888884 568888888 9 99999976332334433
No 121
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=60.55 E-value=8.4 Score=35.72 Aligned_cols=35 Identities=20% Similarity=0.258 Sum_probs=29.7
Q ss_pred CCccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 4 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
+.|+||.|+-.+..| +-.+|+.|.++||+|+..-.
T Consensus 2 ~~~~~i~~iGiGg~G----ms~~A~~L~~~G~~V~~~D~ 36 (326)
T 3eag_A 2 NAMKHIHIIGIGGTF----MGGLAAIAKEAGFEVSGCDA 36 (326)
T ss_dssp -CCCEEEEESCCSHH----HHHHHHHHHHTTCEEEEEES
T ss_pred CCCcEEEEEEECHHH----HHHHHHHHHhCCCEEEEEcC
Confidence 457799999999888 55799999999999999865
No 122
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=59.88 E-value=9.2 Score=28.98 Aligned_cols=41 Identities=15% Similarity=0.134 Sum_probs=30.3
Q ss_pred CCCCccEEEEEcCCCccCHHHHH-HHHHHHHhCCCE-EEEEeC
Q 011848 2 EKQDHVHVAILPLPAVGHVNSML-NLAELLGHAGIK-ITFLNT 42 (476)
Q Consensus 2 ~~~~~~~il~~~~~~~GH~~p~l-~La~~L~~rGH~-Vt~~~~ 42 (476)
+..+|+||+++|..+.|.-.-.- .|-+.+.++|.+ +.+-..
T Consensus 14 ~~~~~~kIlvvC~sG~gTS~m~~~kl~~~~~~~gi~~~~i~~~ 56 (110)
T 3czc_A 14 GRGSMVKVLTACGNGMGSSMVIKMKVENALRQLGVSDIESASC 56 (110)
T ss_dssp ----CEEEEEECCCCHHHHHHHHHHHHHHHHHTTCCCEEEEEE
T ss_pred cccCCcEEEEECCCcHHHHHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 34457899999999999988777 777888889988 655443
No 123
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=59.87 E-value=9.4 Score=34.12 Aligned_cols=38 Identities=11% Similarity=0.124 Sum_probs=28.2
Q ss_pred CCCCccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 2 EKQDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 2 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
.+|.+.|+++++.++.| --.++|++|+++|++|.+...
T Consensus 21 ~~m~~~k~vlITGas~g---IG~a~a~~l~~~G~~V~~~~~ 58 (272)
T 4e3z_A 21 QSMSDTPVVLVTGGSRG---IGAAVCRLAARQGWRVGVNYA 58 (272)
T ss_dssp ---CCSCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred hhccCCCEEEEECCCch---HHHHHHHHHHHCCCEEEEEcC
Confidence 45555688999888764 357899999999999988744
No 124
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=59.59 E-value=17 Score=31.96 Aligned_cols=40 Identities=13% Similarity=0.137 Sum_probs=29.8
Q ss_pred CccEEEEEcCCCcc-----------CHHHHHHHHHHHHhCCCEEEEEeCcc
Q 011848 5 DHVHVAILPLPAVG-----------HVNSMLNLAELLGHAGIKITFLNTEH 44 (476)
Q Consensus 5 ~~~~il~~~~~~~G-----------H~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (476)
.|.||+|+.....+ ...=+....+.|.+.|++|+++++..
T Consensus 2 ~m~kvLivls~~~~~~~~~~~~~G~~~~E~~~p~~vl~~ag~~v~~~s~~g 52 (243)
T 1rw7_A 2 APKKVLLALTSYNDVFYSDGAKTGVFVVEALHPFNTFRKEGFEVDFVSETG 52 (243)
T ss_dssp CCCEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCceEEEEECCCCcccCCCCCCCccCHHHHHHHHHHHHHCCCEEEEECCCC
Confidence 35699988875321 34567777888999999999999754
No 125
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=59.37 E-value=8.4 Score=33.03 Aligned_cols=45 Identities=18% Similarity=0.191 Sum_probs=33.4
Q ss_pred CCccEEEEEcCCCccCHHHHHHHHHHHHh-CCCEEEEEeCccchhhH
Q 011848 4 QDHVHVAILPLPAVGHVNSMLNLAELLGH-AGIKITFLNTEHYYDRV 49 (476)
Q Consensus 4 ~~~~~il~~~~~~~GH~~p~l~La~~L~~-rGH~Vt~~~~~~~~~~~ 49 (476)
+.+.||++...|+.+=. -...|.+.|.+ +|++|.++.++...+.+
T Consensus 17 l~~k~IllgvTGsiaa~-k~~~lv~~L~~~~g~~V~vv~T~~A~~fi 62 (206)
T 1qzu_A 17 ERKFHVLVGVTGSVAAL-KLPLLVSKLLDIPGLEVAVVTTERAKHFY 62 (206)
T ss_dssp CSSEEEEEEECSSGGGG-THHHHHHHHC---CEEEEEEECTGGGGSS
T ss_pred cCCCEEEEEEeChHHHH-HHHHHHHHHhcccCCEEEEEECHhHHHHh
Confidence 34468999988888744 46899999999 89999999997644333
No 126
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=59.33 E-value=27 Score=27.52 Aligned_cols=61 Identities=8% Similarity=-0.073 Sum_probs=39.9
Q ss_pred hCCceeccccccchhhhhHhhhcceeeeEEeccccCHHHHHHHHHHHHhHhHHHHHHHHHHHHHH
Q 011848 380 AGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMVERKEEFMESADRMANL 444 (476)
Q Consensus 380 ~GvP~l~~P~~~DQ~~na~r~~e~~G~g~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~a~~l~~~ 444 (476)
..+|++++-...|. .....+. +.|+--.+.+.++.++|..+|++++.. ...+...+++++.
T Consensus 74 ~~~pii~ls~~~~~-~~~~~~~-~~g~~~~l~kP~~~~~L~~~i~~~~~~--~~~~~~~~~~~~~ 134 (155)
T 1qkk_A 74 PDLPMILVTGHGDI-PMAVQAI-QDGAYDFIAKPFAADRLVQSARRAEEK--RRLVMENRSLRRA 134 (155)
T ss_dssp TTSCEEEEECGGGH-HHHHHHH-HTTCCEEEESSCCHHHHHHHHHHHHHH--HHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCh-HHHHHHH-hcCCCeEEeCCCCHHHHHHHHHHHHHH--HHHHHHHHHHHHH
Confidence 47888887654443 3344442 468766777889999999999999875 4444443444333
No 127
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=59.26 E-value=6 Score=36.19 Aligned_cols=34 Identities=15% Similarity=0.283 Sum_probs=28.5
Q ss_pred CccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCc
Q 011848 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTE 43 (476)
Q Consensus 5 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 43 (476)
.|+||.|+-.|..|+ .+|..|+++||+|+++...
T Consensus 14 ~~~~I~VIG~G~mG~-----~iA~~la~~G~~V~~~d~~ 47 (302)
T 1f0y_A 14 IVKHVTVIGGGLMGA-----GIAQVAAATGHTVVLVDQT 47 (302)
T ss_dssp CCCEEEEECCSHHHH-----HHHHHHHHTTCEEEEECSC
T ss_pred cCCEEEEECCCHHHH-----HHHHHHHhCCCeEEEEECC
Confidence 467999999888876 5788999999999988753
No 128
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=59.13 E-value=35 Score=28.81 Aligned_cols=41 Identities=10% Similarity=0.114 Sum_probs=31.1
Q ss_pred HHHHHHHHcC-CCCceEEEecCCcccHHHHHHHhCCceEEEecch
Q 011848 99 PLLKEMVSDS-KSPVNCIITDGYMSRAIDAAREVGVSIIYFRTIS 142 (476)
Q Consensus 99 ~~~~~ll~~~-~~~~D~Ii~D~~~~~~~~~A~~lgiP~v~~~~~~ 142 (476)
..++..++++ ..++|+||.|.. +..+|+++|+|.+.+.+..
T Consensus 129 ~e~~~~i~~l~~~G~~vvVG~~~---~~~~A~~~Gl~~vli~sg~ 170 (196)
T 2q5c_A 129 DEITTLISKVKTENIKIVVSGKT---VTDEAIKQGLYGETINSGE 170 (196)
T ss_dssp GGHHHHHHHHHHTTCCEEEECHH---HHHHHHHTTCEEEECCCCH
T ss_pred HHHHHHHHHHHHCCCeEEECCHH---HHHHHHHcCCcEEEEecCH
Confidence 3445555555 459999999854 6899999999999987743
No 129
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=58.88 E-value=20 Score=33.57 Aligned_cols=39 Identities=13% Similarity=0.098 Sum_probs=25.8
Q ss_pred CCCCCccEEEEEcCCCccCHHHHHHHHHHHHhC-CCEEEEEeCc
Q 011848 1 MEKQDHVHVAILPLPAVGHVNSMLNLAELLGHA-GIKITFLNTE 43 (476)
Q Consensus 1 m~~~~~~~il~~~~~~~GH~~p~l~La~~L~~r-GH~Vt~~~~~ 43 (476)
|.+|.|+||++.- +.|.+ -..|+++|.++ ||+|+.+.-.
T Consensus 19 ~~~m~~~~vlVtG--atG~i--G~~l~~~L~~~~g~~V~~~~r~ 58 (372)
T 3slg_A 19 PGSMKAKKVLILG--VNGFI--GHHLSKRILETTDWEVFGMDMQ 58 (372)
T ss_dssp ----CCCEEEEES--CSSHH--HHHHHHHHHHHSSCEEEEEESC
T ss_pred CcccCCCEEEEEC--CCChH--HHHHHHHHHhCCCCEEEEEeCC
Confidence 5567777877653 34433 35788999998 9999999853
No 130
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=58.84 E-value=13 Score=31.99 Aligned_cols=46 Identities=15% Similarity=0.130 Sum_probs=38.7
Q ss_pred CccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCccchhhHh
Q 011848 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVI 50 (476)
Q Consensus 5 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~ 50 (476)
+..||++.+.++-.|-....-++..|..+|++|..++..-..+.+.
T Consensus 91 ~~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~iv 136 (215)
T 3ezx_A 91 EAGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVDVLNENVV 136 (215)
T ss_dssp -CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSSCCHHHHH
T ss_pred CCCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCCCCHHHHH
Confidence 3569999999999999999999999999999999998654444443
No 131
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=58.71 E-value=65 Score=31.92 Aligned_cols=34 Identities=21% Similarity=0.325 Sum_probs=26.0
Q ss_pred HHHHHHHcCCCCceEEEecCCcccHHHHHHHh-------CCceEEE
Q 011848 100 LLKEMVSDSKSPVNCIITDGYMSRAIDAAREV-------GVSIIYF 138 (476)
Q Consensus 100 ~~~~ll~~~~~~~D~Ii~D~~~~~~~~~A~~l-------giP~v~~ 138 (476)
.+.+++++. +||+||.... +..+|+++ |||++.+
T Consensus 429 ~l~~~i~~~--~pDLlig~s~---~k~~a~~~~~~~~~~giP~iri 469 (523)
T 3u7q_B 429 HLRSLVFTD--KPDFMIGNSY---GKFIQRDTLHKGKEFEVPLIRI 469 (523)
T ss_dssp HHHHHHHHT--CCSEEEECTT---HHHHHHHHHHHCGGGCCCEEEC
T ss_pred HHHHHHHhc--CCCEEEECcc---HHHHHHHhhcccccCCCceEEe
Confidence 456666665 9999999965 45677777 9999875
No 132
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=58.33 E-value=69 Score=28.08 Aligned_cols=39 Identities=18% Similarity=0.142 Sum_probs=31.3
Q ss_pred ccEEEEEcC--CCccCHHHHHHHHHHHHhCCCEEEEEeCcc
Q 011848 6 HVHVAILPL--PAVGHVNSMLNLAELLGHAGIKITFLNTEH 44 (476)
Q Consensus 6 ~~~il~~~~--~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (476)
|+|++.++. |+-|=..-...||..|+++|++|.++-...
T Consensus 17 ~~~vI~v~s~kGGvGKTT~a~nLA~~la~~G~~VlliD~D~ 57 (262)
T 2ph1_A 17 IKSRIAVMSGKGGVGKSTVTALLAVHYARQGKKVGILDADF 57 (262)
T ss_dssp CSCEEEEECSSSCTTHHHHHHHHHHHHHHTTCCEEEEECCS
T ss_pred CCeEEEEEcCCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 455554443 678999999999999999999999997644
No 133
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=58.24 E-value=12 Score=32.14 Aligned_cols=37 Identities=14% Similarity=0.020 Sum_probs=25.8
Q ss_pred CCccEEEEEcCCCccCHHHHHHHHHHHH-hCCCEEEEEeCc
Q 011848 4 QDHVHVAILPLPAVGHVNSMLNLAELLG-HAGIKITFLNTE 43 (476)
Q Consensus 4 ~~~~~il~~~~~~~GH~~p~l~La~~L~-~rGH~Vt~~~~~ 43 (476)
+.|||.++++..+. - --..+++.|+ ++||+|+.+.-.
T Consensus 2 ~~mmk~vlVtGasg-~--iG~~~~~~l~~~~g~~V~~~~r~ 39 (221)
T 3r6d_A 2 NAMYXYITILGAAG-Q--IAQXLTATLLTYTDMHITLYGRQ 39 (221)
T ss_dssp CCSCSEEEEESTTS-H--HHHHHHHHHHHHCCCEEEEEESS
T ss_pred CceEEEEEEEeCCc-H--HHHHHHHHHHhcCCceEEEEecC
Confidence 34677555555433 2 3478899999 899999998753
No 134
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=58.23 E-value=4.6 Score=38.18 Aligned_cols=33 Identities=15% Similarity=0.127 Sum_probs=27.4
Q ss_pred CccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 5 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
.|+||+|+-.|..|. .+|..|+++||+|+++..
T Consensus 14 ~M~kI~iIG~G~mG~-----~la~~L~~~G~~V~~~~r 46 (366)
T 1evy_A 14 YLNKAVVFGSGAFGT-----ALAMVLSKKCREVCVWHM 46 (366)
T ss_dssp CEEEEEEECCSHHHH-----HHHHHHTTTEEEEEEECS
T ss_pred ccCeEEEECCCHHHH-----HHHHHHHhCCCEEEEEEC
Confidence 344999998888774 678999999999999875
No 135
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=58.19 E-value=9.1 Score=32.06 Aligned_cols=41 Identities=7% Similarity=0.041 Sum_probs=33.3
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCccchhhH
Q 011848 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRV 49 (476)
Q Consensus 8 ~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~ 49 (476)
||++...|+.|=. =...+.+.|.++|++|.++.++.-.+.+
T Consensus 4 ~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~fi 44 (181)
T 1g63_A 4 KLLICATASINVI-NINHYIVELKQHFDEVNILFSPSSKNFI 44 (181)
T ss_dssp CEEEEECSCGGGG-GHHHHHHHHTTTSSCEEEEECGGGGGTS
T ss_pred EEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEchhHHHHH
Confidence 7888888887655 6789999999999999999987644333
No 136
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=58.10 E-value=6.7 Score=33.28 Aligned_cols=42 Identities=12% Similarity=-0.028 Sum_probs=34.4
Q ss_pred ccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCccchhh
Q 011848 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDR 48 (476)
Q Consensus 6 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~ 48 (476)
..||++...|+.|=.. ...|.+.|.++|++|.++.++...+.
T Consensus 8 ~k~IllgvTGs~aa~k-~~~l~~~L~~~g~~V~vv~T~~A~~f 49 (194)
T 1p3y_1 8 DKKLLIGICGSISSVG-ISSYLLYFKSFFKEIRVVMTKTAEDL 49 (194)
T ss_dssp GCEEEEEECSCGGGGG-THHHHHHHTTTSSEEEEEECHHHHHH
T ss_pred CCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEEchhHHHH
Confidence 4589998888887665 78999999999999999998764433
No 137
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=58.08 E-value=8.2 Score=35.20 Aligned_cols=38 Identities=11% Similarity=0.204 Sum_probs=29.1
Q ss_pred ccEEEEEcCCCccC---HHHHHHHHHHHHhCCCEEEEEeCc
Q 011848 6 HVHVAILPLPAVGH---VNSMLNLAELLGHAGIKITFLNTE 43 (476)
Q Consensus 6 ~~~il~~~~~~~GH---~~p~l~La~~L~~rGH~Vt~~~~~ 43 (476)
||||+|+..+.... ......++++|.++||+|.++.+.
T Consensus 1 mm~i~il~~~~~~~~~~~~s~~~l~~a~~~~G~~v~~~d~~ 41 (316)
T 1gsa_A 1 MIKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMG 41 (316)
T ss_dssp CCEEEEECSCGGGCCTTTCHHHHHHHHHHHTTCEEEEECGG
T ss_pred CceEEEEeCcHHhCCcCCChHHHHHHHHHHCCCEEEEEchh
Confidence 46999999874321 234567999999999999999864
No 138
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=57.85 E-value=6.9 Score=36.64 Aligned_cols=33 Identities=24% Similarity=0.307 Sum_probs=26.5
Q ss_pred CccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 5 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
.+|||+|+-.|..|. .+|..|+++||+|+++..
T Consensus 3 ~~mki~iiG~G~~G~-----~~a~~L~~~g~~V~~~~r 35 (359)
T 1bg6_A 3 ESKTYAVLGLGNGGH-----AFAAYLALKGQSVLAWDI 35 (359)
T ss_dssp -CCEEEEECCSHHHH-----HHHHHHHHTTCEEEEECS
T ss_pred CcCeEEEECCCHHHH-----HHHHHHHhCCCEEEEEeC
Confidence 357999998877764 478889999999998875
No 139
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=57.44 E-value=7.3 Score=34.09 Aligned_cols=38 Identities=16% Similarity=0.193 Sum_probs=34.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCcc
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEH 44 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (476)
|||+|..-|+-|-..-...||..|+++|++|.++-...
T Consensus 1 mkI~vs~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~ 38 (254)
T 3kjh_A 1 MKLAVAGKGGVGKTTVAAGLIKIMASDYDKIYAVDGDP 38 (254)
T ss_dssp CEEEEECSSSHHHHHHHHHHHHHHTTTCSCEEEEEECT
T ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 58999777899999999999999999999999998654
No 140
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=57.05 E-value=95 Score=26.74 Aligned_cols=151 Identities=15% Similarity=0.056 Sum_probs=80.6
Q ss_pred hhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhCCCcEEEEEcCCCCCCCCCCCCCchHHHHHh-cCCceeeeccCHH
Q 011848 276 WLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEAT-KERGCIAGWVPQE 354 (476)
Q Consensus 276 ~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~nv~~~~~vp~~ 354 (476)
|++ -.++++++|..|... ...+..|.+.+.++.++.. .+.+.+.+-. ..++.+...--..
T Consensus 26 fl~-L~gk~VLVVGgG~va-------~~ka~~Ll~~GA~VtVvap-----------~~~~~l~~l~~~~~i~~i~~~~~~ 86 (223)
T 3dfz_A 26 MLD-LKGRSVLVVGGGTIA-------TRRIKGFLQEGAAITVVAP-----------TVSAEINEWEAKGQLRVKRKKVGE 86 (223)
T ss_dssp EEC-CTTCCEEEECCSHHH-------HHHHHHHGGGCCCEEEECS-----------SCCHHHHHHHHTTSCEEECSCCCG
T ss_pred EEE-cCCCEEEEECCCHHH-------HHHHHHHHHCCCEEEEECC-----------CCCHHHHHHHHcCCcEEEECCCCH
Confidence 444 447888988888665 4555677777888777653 1223332211 1334443222233
Q ss_pred HHhCcCCCCccccccChhHHHHHHHhCCceecccc-ccchhhhhHhh----hcceeeeEEec-c---ccCHHHHHHHHHH
Q 011848 355 EVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPS-FADQQINSRFV----GEVWKLGLDIK-D---LCDRNIVEKAVND 425 (476)
Q Consensus 355 ~ll~~~~~~~~I~HgG~gs~~eal~~GvP~l~~P~-~~DQ~~na~r~----~e~~G~g~~~~-~---~~~~~~l~~ai~~ 425 (476)
+.|..+++ +|.--|.-.+.+.++.-.- ..+|. ..|.+..+... .++-++-+.+. . ..-+..|++.|..
T Consensus 87 ~dL~~adL--VIaAT~d~~~N~~I~~~ak-~gi~VNvvD~p~~~~f~~Paiv~rg~l~iaIST~G~sP~la~~iR~~ie~ 163 (223)
T 3dfz_A 87 EDLLNVFF--IVVATNDQAVNKFVKQHIK-NDQLVNMASSFSDGNIQIPAQFSRGRLSLAISTDGASPLLTKRIKEDLSS 163 (223)
T ss_dssp GGSSSCSE--EEECCCCTHHHHHHHHHSC-TTCEEEC-----CCSEECCEEEEETTEEEEEECTTSCHHHHHHHHHHHHH
T ss_pred hHhCCCCE--EEECCCCHHHHHHHHHHHh-CCCEEEEeCCcccCeEEEeeEEEeCCEEEEEECCCCCcHHHHHHHHHHHH
Confidence 45667776 8888888777777665332 33332 24555444221 12333444443 1 2334556666666
Q ss_pred HHhHhHHHHHHHHHHHHHHHHHH
Q 011848 426 LMVERKEEFMESADRMANLAKKS 448 (476)
Q Consensus 426 ~l~~~~~~~~~~a~~l~~~~~~~ 448 (476)
++..+-..+-+.+.++.+++++.
T Consensus 164 ~lp~~~~~~~~~~~~~R~~vk~~ 186 (223)
T 3dfz_A 164 NYDESYTQYTQFLYECRVLIHRL 186 (223)
T ss_dssp HSCTHHHHHHHHHHHHHHHHHHC
T ss_pred HccHHHHHHHHHHHHHHHHHHHH
Confidence 66532245667777777777764
No 141
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=56.67 E-value=14 Score=29.37 Aligned_cols=39 Identities=28% Similarity=0.418 Sum_probs=29.1
Q ss_pred ccEEEEEcCCCccCHHHH-HHHHHHHHhCCCEEEEEeCcc
Q 011848 6 HVHVAILPLPAVGHVNSM-LNLAELLGHAGIKITFLNTEH 44 (476)
Q Consensus 6 ~~~il~~~~~~~GH~~p~-l~La~~L~~rGH~Vt~~~~~~ 44 (476)
|+||+++-...+|+..-+ -.|++.|.++|++|.++....
T Consensus 1 M~ki~I~y~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~~ 40 (148)
T 3f6r_A 1 MSKVLIVFGSSTGNTESIAQKLEELIAAGGHEVTLLNAAD 40 (148)
T ss_dssp -CEEEEEEECSSSHHHHHHHHHHHHHHTTTCEEEEEETTT
T ss_pred CCeEEEEEECCCchHHHHHHHHHHHHHhCCCeEEEEehhh
Confidence 568888777778887654 446788888899999987644
No 142
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=56.47 E-value=4.2 Score=35.32 Aligned_cols=34 Identities=32% Similarity=0.309 Sum_probs=27.4
Q ss_pred CCccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 4 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
|.||||.|+-.|..| ..+|+.|++.||+|+++..
T Consensus 21 m~mmkI~IIG~G~mG-----~~la~~l~~~g~~V~~v~~ 54 (220)
T 4huj_A 21 QSMTTYAIIGAGAIG-----SALAERFTAAQIPAIIANS 54 (220)
T ss_dssp GGSCCEEEEECHHHH-----HHHHHHHHHTTCCEEEECT
T ss_pred hcCCEEEEECCCHHH-----HHHHHHHHhCCCEEEEEEC
Confidence 457899999877766 4689999999999998543
No 143
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=56.23 E-value=15 Score=29.26 Aligned_cols=42 Identities=10% Similarity=0.062 Sum_probs=32.4
Q ss_pred EE-EEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCccchhhH
Q 011848 8 HV-AILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRV 49 (476)
Q Consensus 8 ~i-l~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~ 49 (476)
|+ +++..+..-.+++.+.+|...+..|++|+++.+......+
T Consensus 9 kl~II~~sg~~d~~~~a~~lA~~Aaa~g~eV~iF~t~~gv~~l 51 (144)
T 2qs7_A 9 KLSIIVFSGTIDKLMPVGILTSGAAASGYEVNLFFTFWGLQAI 51 (144)
T ss_dssp EEEEEECCCSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHT
T ss_pred CEEEEEEcCCHHHHHHHHHHHHHHHHcCCcEEEEEehHHHHHH
Confidence 55 4445567788899999999999999999999985544333
No 144
>3pdi_A Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=55.74 E-value=43 Score=32.87 Aligned_cols=34 Identities=18% Similarity=0.249 Sum_probs=26.8
Q ss_pred HHHHHHHcCCCCceEEEecCCcccHHHHHHHhCCceEEE
Q 011848 100 LLKEMVSDSKSPVNCIITDGYMSRAIDAAREVGVSIIYF 138 (476)
Q Consensus 100 ~~~~ll~~~~~~~D~Ii~D~~~~~~~~~A~~lgiP~v~~ 138 (476)
.+.+++++. +||++|.... ...+|+++|||++.+
T Consensus 392 el~~~i~~~--~pDL~ig~~~---~~~~a~k~gIP~~~~ 425 (483)
T 3pdi_A 392 VLLKTVDEY--QADILIAGGR---NMYTALKGRVPFLDI 425 (483)
T ss_dssp HHHHHHHHT--TCSEEECCGG---GHHHHHHTTCCBCCC
T ss_pred HHHHHHHhc--CCCEEEECCc---hhHHHHHcCCCEEEe
Confidence 456667776 9999998743 678899999999864
No 145
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=55.31 E-value=7.8 Score=35.75 Aligned_cols=42 Identities=21% Similarity=0.313 Sum_probs=30.7
Q ss_pred CccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCccchhhHhh
Q 011848 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIR 51 (476)
Q Consensus 5 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~ 51 (476)
.++||+|+-.|+.| ..+|..|++.||+|+++..+...+.+.+
T Consensus 18 ~~~kI~IiGaGa~G-----~~~a~~L~~~G~~V~l~~~~~~~~~i~~ 59 (318)
T 3hwr_A 18 QGMKVAIMGAGAVG-----CYYGGMLARAGHEVILIARPQHVQAIEA 59 (318)
T ss_dssp --CEEEEESCSHHH-----HHHHHHHHHTTCEEEEECCHHHHHHHHH
T ss_pred cCCcEEEECcCHHH-----HHHHHHHHHCCCeEEEEEcHhHHHHHHh
Confidence 36799999988887 4678899999999999944333444444
No 146
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=55.20 E-value=15 Score=31.20 Aligned_cols=44 Identities=25% Similarity=0.278 Sum_probs=29.8
Q ss_pred CCCCCccEEEEEcCCCccCHHHHHH-HHHHHHhCCCEEEEEeCcc
Q 011848 1 MEKQDHVHVAILPLPAVGHVNSMLN-LAELLGHAGIKITFLNTEH 44 (476)
Q Consensus 1 m~~~~~~~il~~~~~~~GH~~p~l~-La~~L~~rGH~Vt~~~~~~ 44 (476)
|.-++||||+++-....|+..-+.. +++.|.+.|++|.++....
T Consensus 1 ~~~~~mmkilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l~~ 45 (211)
T 1ydg_A 1 MSLTAPVKLAIVFYSSTGTGYAMAQEAAEAGRAAGAEVRLLKVRE 45 (211)
T ss_dssp ----CCCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred CCcCCCCeEEEEEECCCChHHHHHHHHHHHHhcCCCEEEEEeccc
Confidence 4444678998887777888765544 5677777899998887543
No 147
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=55.10 E-value=9.6 Score=34.98 Aligned_cols=34 Identities=26% Similarity=0.337 Sum_probs=28.3
Q ss_pred CCccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 4 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
.+||||.|+-.|..| ..+|+.|+++||+|++...
T Consensus 19 ~~m~~I~iIG~G~mG-----~~~A~~l~~~G~~V~~~dr 52 (310)
T 3doj_A 19 SHMMEVGFLGLGIMG-----KAMSMNLLKNGFKVTVWNR 52 (310)
T ss_dssp CCSCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred ccCCEEEEECccHHH-----HHHHHHHHHCCCeEEEEeC
Confidence 457899999877766 5789999999999998865
No 148
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=55.08 E-value=9.9 Score=34.70 Aligned_cols=29 Identities=34% Similarity=0.528 Sum_probs=25.5
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEe
Q 011848 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLN 41 (476)
Q Consensus 8 ~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~ 41 (476)
||.|+-.|.+|. ++|+.|+++||+|+++.
T Consensus 7 kIgfIGLG~MG~-----~mA~~L~~~G~~V~v~d 35 (297)
T 4gbj_A 7 KIAFLGLGNLGT-----PIAEILLEAGYELVVWN 35 (297)
T ss_dssp EEEEECCSTTHH-----HHHHHHHHTTCEEEEC-
T ss_pred cEEEEecHHHHH-----HHHHHHHHCCCeEEEEe
Confidence 899999999884 68999999999999865
No 149
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=54.97 E-value=12 Score=34.30 Aligned_cols=39 Identities=26% Similarity=0.454 Sum_probs=30.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCccchhhHhh
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIR 51 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~ 51 (476)
|||+|+-.|+.|- .+|..|++.||+|+++.... .+.+.+
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L~~~g~~V~~~~r~~-~~~i~~ 41 (312)
T 3hn2_A 3 LRIAIVGAGALGL-----YYGALLQRSGEDVHFLLRRD-YEAIAG 41 (312)
T ss_dssp -CEEEECCSTTHH-----HHHHHHHHTSCCEEEECSTT-HHHHHH
T ss_pred CEEEEECcCHHHH-----HHHHHHHHCCCeEEEEEcCc-HHHHHh
Confidence 5999999999984 46889999999999998755 455544
No 150
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=54.65 E-value=10 Score=34.74 Aligned_cols=32 Identities=22% Similarity=0.301 Sum_probs=28.2
Q ss_pred ccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 6 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
|.||.|+-.|.+|. ++|+.|.++||+|++..-
T Consensus 3 M~kIgfIGlG~MG~-----~mA~~L~~~G~~v~v~dr 34 (300)
T 3obb_A 3 MKQIAFIGLGHMGA-----PMATNLLKAGYLLNVFDL 34 (300)
T ss_dssp CCEEEEECCSTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred cCEEEEeeehHHHH-----HHHHHHHhCCCeEEEEcC
Confidence 55999999999985 689999999999998864
No 151
>2b8t_A Thymidine kinase; deoxyribonucleoside kinase, zinc-binding domain, TK1, UU-TK, transferase; HET: THM; 2.00A {Ureaplasma parvum} SCOP: c.37.1.24 g.39.1.14 PDB: 2uz3_A*
Probab=53.96 E-value=79 Score=27.22 Aligned_cols=39 Identities=13% Similarity=0.167 Sum_probs=33.8
Q ss_pred ccEEEEEcCC-CccCHHHHHHHHHHHHhCCCEEEEEeCcc
Q 011848 6 HVHVAILPLP-AVGHVNSMLNLAELLGHAGIKITFLNTEH 44 (476)
Q Consensus 6 ~~~il~~~~~-~~GH~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (476)
...+.+++.+ +.|-..-.+.++..+..+|..|.++.+..
T Consensus 11 ~G~i~litG~mGsGKTT~ll~~~~r~~~~g~kVli~~~~~ 50 (223)
T 2b8t_A 11 IGWIEFITGPMFAGKTAELIRRLHRLEYADVKYLVFKPKI 50 (223)
T ss_dssp CCEEEEEECSTTSCHHHHHHHHHHHHHHTTCCEEEEEECC
T ss_pred CcEEEEEECCCCCcHHHHHHHHHHHHHhcCCEEEEEEecc
Confidence 3467788877 99999999999999999999999998654
No 152
>3ih5_A Electron transfer flavoprotein alpha-subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; 2.60A {Bacteroides thetaiotaomicron}
Probab=53.89 E-value=4.7 Score=35.00 Aligned_cols=111 Identities=8% Similarity=0.046 Sum_probs=62.7
Q ss_pred ccEEEEEcCCCccCHHH----HHHHHHHHHhC-CCEEEEEeCccchhhH-hhcccccccccccCCCe-eEEEcCC-CCCC
Q 011848 6 HVHVAILPLPAVGHVNS----MLNLAELLGHA-GIKITFLNTEHYYDRV-IRHSSDAFSRYMQIPGF-QFKTLTD-GLPR 77 (476)
Q Consensus 6 ~~~il~~~~~~~GH~~p----~l~La~~L~~r-GH~Vt~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~ 77 (476)
|..|+++.--..|.++| .+..|++|++. |-+|+.++-....+.. .+... . +. +.+.+.+ .+..
T Consensus 3 m~~ilV~~E~~~g~l~~~s~ell~~A~~La~~~g~~v~av~~G~~~~~~~~~~~~--------~-Gad~v~~v~~~~~~~ 73 (217)
T 3ih5_A 3 ANNLFVYCEIEEGIVADVSLELLTKGRSLANELNCQLEAVVAGTGLKEIEKQILP--------Y-GVDKLHVFDAEGLYP 73 (217)
T ss_dssp CCCEEEECCEETTEECHHHHHHHHHHHHHHHHHTCCEEEEEEESCCTTTHHHHGG--------G-TCSEEEEEECGGGSS
T ss_pred cccEEEEEECcCCEECHHHHHHHHHHHHHHHhcCCeEEEEEECCCHHHHHHHHHh--------c-CCCEEEEecCccccc
Confidence 55788888766676665 57778888875 7777666543322221 11110 0 11 2222221 1111
Q ss_pred CCCCCCCChHHHHHHHHhhCcHHHHHHHHcCCCCceEEEecCCcc---cHHHHHHHhCCceEEEecc
Q 011848 78 DHPRTPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMS---RAIDAAREVGVSIIYFRTI 141 (476)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~D~Ii~D~~~~---~~~~~A~~lgiP~v~~~~~ 141 (476)
. ... .....+.+++++. +||+|+...-.. .+..+|.+|++|.+.-+..
T Consensus 74 ~------~~~--------~~a~~l~~~i~~~--~p~~Vl~g~t~~G~~laprlAa~L~~~~~sdv~~ 124 (217)
T 3ih5_A 74 Y------TSL--------PHTSILVNLFKEE--QPQICLMGATVIGRDLGPRVSSALTSGLTADCTS 124 (217)
T ss_dssp C------CHH--------HHHHHHHHHHHHH--CCSEEEEECSHHHHHHHHHHHHHTTCCCBCSCSE
T ss_pred C------CHH--------HHHHHHHHHHHhc--CCCEEEEeCCcchhhHHHHHHHHhCCCccceEEE
Confidence 0 111 1223455666775 899999876544 5778899999999986543
No 153
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=53.74 E-value=48 Score=32.57 Aligned_cols=34 Identities=12% Similarity=0.069 Sum_probs=27.3
Q ss_pred HHHHHHHcCCCCceEEEecCCcccHHHHHHHhCCceEEE
Q 011848 100 LLKEMVSDSKSPVNCIITDGYMSRAIDAAREVGVSIIYF 138 (476)
Q Consensus 100 ~~~~ll~~~~~~~D~Ii~D~~~~~~~~~A~~lgiP~v~~ 138 (476)
.+.+++++. +||++|... ....+|+++|||++.+
T Consensus 408 el~~~i~~~--~pDL~ig~~---~~~~ia~k~gIP~~~~ 441 (492)
T 3u7q_A 408 EFEEFVKRI--KPDLIGSGI---KEKFIFQKMGIPFREM 441 (492)
T ss_dssp HHHHHHHHH--CCSEEEECH---HHHHHHHHTTCCEEES
T ss_pred HHHHHHHhc--CCcEEEeCc---chhHHHHHcCCCEEec
Confidence 356677776 999999974 4678999999999964
No 154
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=53.74 E-value=17 Score=31.77 Aligned_cols=23 Identities=22% Similarity=0.238 Sum_probs=20.2
Q ss_pred HHHHHHHHHHhCCCEEEEEeCcc
Q 011848 22 SMLNLAELLGHAGIKITFLNTEH 44 (476)
Q Consensus 22 p~l~La~~L~~rGH~Vt~~~~~~ 44 (476)
.-.+||++|+++|++|+++..+.
T Consensus 31 mG~aiA~~~~~~Ga~V~lv~~~~ 53 (232)
T 2gk4_A 31 LGKIITETLLSAGYEVCLITTKR 53 (232)
T ss_dssp HHHHHHHHHHHTTCEEEEEECTT
T ss_pred HHHHHHHHHHHCCCEEEEEeCCc
Confidence 46789999999999999999764
No 155
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=53.61 E-value=10 Score=34.47 Aligned_cols=33 Identities=21% Similarity=0.296 Sum_probs=27.8
Q ss_pred CccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 5 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
+|+||.|+-.|..|. .+|+.|+++||+|+++..
T Consensus 2 ~m~~I~iiG~G~mG~-----~~a~~l~~~G~~V~~~d~ 34 (302)
T 2h78_A 2 HMKQIAFIGLGHMGA-----PMATNLLKAGYLLNVFDL 34 (302)
T ss_dssp -CCEEEEECCSTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCCEEEEEeecHHHH-----HHHHHHHhCCCeEEEEcC
Confidence 478999998888875 678999999999998864
No 156
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=52.72 E-value=18 Score=31.95 Aligned_cols=40 Identities=13% Similarity=0.130 Sum_probs=28.0
Q ss_pred CCCccEEEEEcCCCc--cCHHHHHH-HHHHHHhCCCEEEEEeC
Q 011848 3 KQDHVHVAILPLPAV--GHVNSMLN-LAELLGHAGIKITFLNT 42 (476)
Q Consensus 3 ~~~~~~il~~~~~~~--GH~~p~l~-La~~L~~rGH~Vt~~~~ 42 (476)
.+.||||+++....+ |...-+.. +++.|.+.|++|.++--
T Consensus 31 ~~~~mkIliI~GS~r~~s~t~~La~~~~~~l~~~g~eve~idL 73 (247)
T 2q62_A 31 STHRPRILILYGSLRTVSYSRLLAEEARRLLEFFGAEVKVFDP 73 (247)
T ss_dssp CCSCCEEEEEECCCCSSCHHHHHHHHHHHHHHHTTCEEEECCC
T ss_pred cCCCCeEEEEEccCCCCCHHHHHHHHHHHHHhhCCCEEEEEEh
Confidence 456789988887654 55544444 56667778999988765
No 157
>2ark_A Flavodoxin; FMN, structural genomics, PSI, structure initiative, midwest center for structural genomic electron transport; 2.40A {Aquifex aeolicus} SCOP: c.23.5.8
Probab=52.61 E-value=16 Score=30.48 Aligned_cols=41 Identities=15% Similarity=0.204 Sum_probs=31.1
Q ss_pred CCccEEEEEcCCCccCHHHHHH-HHHHHHh-CCCEEEEEeCcc
Q 011848 4 QDHVHVAILPLPAVGHVNSMLN-LAELLGH-AGIKITFLNTEH 44 (476)
Q Consensus 4 ~~~~~il~~~~~~~GH~~p~l~-La~~L~~-rGH~Vt~~~~~~ 44 (476)
+.||||+++-....|+..-+.. +++.|.+ .|++|.++....
T Consensus 2 ~~M~kiliiy~S~~GnT~~~a~~i~~~l~~~~g~~v~~~~l~~ 44 (188)
T 2ark_A 2 NAMGKVLVIYDTRTGNTKKMAELVAEGARSLEGTEVRLKHVDE 44 (188)
T ss_dssp CCCEEEEEEECCSSSHHHHHHHHHHHHHHTSTTEEEEEEETTT
T ss_pred CCCCEEEEEEECCCcHHHHHHHHHHHHHhhcCCCeEEEEEhhh
Confidence 4578998888877888776544 5777777 899999887644
No 158
>4hs4_A Chromate reductase; triple-layered, A/B/A structure, NAD(P)H-dependent FMN reduc oxidoreductase; HET: FMN; 2.10A {Gluconacetobacter hansenii} PDB: 3s2y_A* 4h6p_A*
Probab=52.37 E-value=7.7 Score=33.05 Aligned_cols=38 Identities=18% Similarity=0.163 Sum_probs=19.3
Q ss_pred CCCCCccEEEEEcCCCc--cCHHHHHHHHHHHHhCCCEEE
Q 011848 1 MEKQDHVHVAILPLPAV--GHVNSMLNLAELLGHAGIKIT 38 (476)
Q Consensus 1 m~~~~~~~il~~~~~~~--GH~~p~l~La~~L~~rGH~Vt 38 (476)
|.+|++|||+++....+ |...-+...+.+..+.|++|.
T Consensus 1 m~~M~~mkIl~I~GS~r~~s~t~~la~~~~~~~~~g~~v~ 40 (199)
T 4hs4_A 1 MTTTSPLHFVTLLGSLRKASFNAAVARALPEIAPEGIAIT 40 (199)
T ss_dssp ----CCEEEEEEECCCSTTCHHHHHHHHHHHHCCTTEEEE
T ss_pred CCCCCCCEEEEEEcCCCCCChHHHHHHHHHHHccCCCEEE
Confidence 77888889988877644 333333333333334577776
No 159
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=51.74 E-value=15 Score=29.24 Aligned_cols=36 Identities=11% Similarity=0.111 Sum_probs=30.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCccc
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHY 45 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~ 45 (476)
.+++++..|+. +-|++.+++.|.++|.+|+++ ....
T Consensus 19 ~~~llIaGG~G--iaPl~sm~~~l~~~~~~v~l~-g~R~ 54 (142)
T 3lyu_A 19 GKILAIGAYTG--IVEVYPIAKAWQEIGNDVTTL-HVTF 54 (142)
T ss_dssp SEEEEEEETTH--HHHHHHHHHHHHHTTCEEEEE-EEEE
T ss_pred CeEEEEECcCc--HHHHHHHHHHHHhcCCcEEEE-EeCC
Confidence 47888888774 899999999999999999998 5443
No 160
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=51.71 E-value=15 Score=32.68 Aligned_cols=41 Identities=10% Similarity=0.195 Sum_probs=34.2
Q ss_pred CCccEEEEEcCC---CccCHHHHHHHHHHHHhCCCEEEEEeCcc
Q 011848 4 QDHVHVAILPLP---AVGHVNSMLNLAELLGHAGIKITFLNTEH 44 (476)
Q Consensus 4 ~~~~~il~~~~~---~~GH~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (476)
|..||..|++.+ +.|-=.-.-.|+..|..||++|+..--..
T Consensus 20 ~~~~KyIfVTGGVvS~lGKGi~aaSlg~lLk~~G~~Vt~~K~DP 63 (295)
T 2vo1_A 20 FQSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDP 63 (295)
T ss_dssp -CCCEEEEEEECSSSSSSHHHHHHHHHHHHHHTTCCEEEEEEEC
T ss_pred cccceEEEEcCCcccccccHHHHHHHHHHHHHCCCcceeeeccc
Confidence 456799999997 56777888999999999999999987544
No 161
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=51.62 E-value=7.3 Score=35.98 Aligned_cols=33 Identities=12% Similarity=0.201 Sum_probs=28.0
Q ss_pred ccEEEEEcCCCccCHHHHHHHHHHHHhCC-CEEEEEeCc
Q 011848 6 HVHVAILPLPAVGHVNSMLNLAELLGHAG-IKITFLNTE 43 (476)
Q Consensus 6 ~~~il~~~~~~~GH~~p~l~La~~L~~rG-H~Vt~~~~~ 43 (476)
+|||.|+-.|..| ..+|..|+++| |+|++....
T Consensus 24 ~m~IgvIG~G~mG-----~~lA~~L~~~G~~~V~~~dr~ 57 (317)
T 4ezb_A 24 MTTIAFIGFGEAA-----QSIAGGLGGRNAARLAAYDLR 57 (317)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHTTTCSEEEEECGG
T ss_pred CCeEEEECccHHH-----HHHHHHHHHcCCCeEEEEeCC
Confidence 4699999888777 67899999999 999988753
No 162
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=51.53 E-value=75 Score=31.46 Aligned_cols=34 Identities=15% Similarity=0.295 Sum_probs=26.6
Q ss_pred HHHHHHHcCCCCceEEEecCCcccHHHHHHHh-------CCceEEE
Q 011848 100 LLKEMVSDSKSPVNCIITDGYMSRAIDAAREV-------GVSIIYF 138 (476)
Q Consensus 100 ~~~~ll~~~~~~~D~Ii~D~~~~~~~~~A~~l-------giP~v~~ 138 (476)
.+.+++++. +||++|.+.. +..+|+++ |||++.+
T Consensus 425 ~l~~~i~~~--~pDLiig~~~---~~~~a~~~~~~g~~~gip~v~i 465 (519)
T 1qgu_B 425 HFRSLMFTR--QPDFMIGNSY---GKFIQRDTLAKGKAFEVPLIRL 465 (519)
T ss_dssp HHHHHHHHH--CCSEEEECGG---GHHHHHHHHHHCGGGCCCEEEC
T ss_pred HHHHHHhhc--CCCEEEECcc---hHHHHHHhhcccccCCCCeEEe
Confidence 356666665 9999999864 57788888 9999875
No 163
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=51.47 E-value=12 Score=39.03 Aligned_cols=113 Identities=15% Similarity=0.056 Sum_probs=77.7
Q ss_pred eccCHHHHhCcCCCCccccccChhHHHHHHHhCCceeccccccchhhhhHh-hh---cceeeeEEeccccCHHHHHHHHH
Q 011848 349 GWVPQEEVLAHSAVGGFLTHCGWNSTLESIVAGMPMICWPSFADQQINSRF-VG---EVWKLGLDIKDLCDRNIVEKAVN 424 (476)
Q Consensus 349 ~~vp~~~ll~~~~~~~~I~HgG~gs~~eal~~GvP~l~~P~~~DQ~~na~r-~~---e~~G~g~~~~~~~~~~~l~~ai~ 424 (476)
++.+-.++|..+++ +||= =...+.|.+..++|++....-.|++.+-.| +- ++.--|.. --+.++|.++|.
T Consensus 605 ~~~di~~ll~~aD~--lITD-ySSv~fD~~~l~kPiif~~~D~~~Y~~~~rg~y~d~~~~~pg~~---~~~~~eL~~~i~ 678 (729)
T 3l7i_A 605 NYNDVSELFLISDC--LITD-YSSVMFDYGILKRPQFFFAYDIDKYDKGLRGFYMNYMEDLPGPI---YTEPYGLAKELK 678 (729)
T ss_dssp TCSCHHHHHHTCSE--EEES-SCTHHHHHGGGCCCEEEECTTTTTTTSSCCSBSSCTTSSSSSCE---ESSHHHHHHHHT
T ss_pred CCcCHHHHHHHhCE--EEee-chHHHHhHHhhCCCEEEecCCHHHHhhccCCcccChhHhCCCCe---ECCHHHHHHHHh
Confidence 55677889988997 8887 566889999999999988766666543111 10 00111222 358899999999
Q ss_pred HHHh-HhHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHhc
Q 011848 425 DLMV-ERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIKMMS 470 (476)
Q Consensus 425 ~~l~-~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~i~~l~~~~ 470 (476)
.... + ..|+++.+++.+++-. .++|.++++.++.+++......
T Consensus 679 ~~~~~~--~~~~~~~~~~~~~~~~-~~dg~as~ri~~~i~~~~~~~~ 722 (729)
T 3l7i_A 679 NLDKVQ--QQYQEKIDAFYDRFCS-VDNGKASQYIGDLIHKDIKEQL 722 (729)
T ss_dssp THHHHH--HHTHHHHHHHHHHHST-TCCSCHHHHHHHHHHHHHHHHC
T ss_pred hhhccc--hhHHHHHHHHHHHhCC-ccCChHHHHHHHHHHhcCcCcc
Confidence 8876 4 6788888888888765 3456677777666666655443
No 164
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=51.46 E-value=8.3 Score=36.28 Aligned_cols=34 Identities=29% Similarity=0.309 Sum_probs=28.9
Q ss_pred CccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCc
Q 011848 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTE 43 (476)
Q Consensus 5 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 43 (476)
.+|||.|+-.|..|. .+|..|++.||+|++....
T Consensus 28 ~~mkI~VIGaG~mG~-----alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 28 FKHPIAILGAGSWGT-----ALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp CCSCEEEECCSHHHH-----HHHHHHHTTTCCEEEECSC
T ss_pred cCCeEEEECccHHHH-----HHHHHHHHCCCeEEEEeCC
Confidence 357999999988874 6899999999999998864
No 165
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=51.28 E-value=16 Score=31.60 Aligned_cols=39 Identities=18% Similarity=0.224 Sum_probs=31.0
Q ss_pred ccEEEEEcC--CCccCHHHHHHHHHHHHhCCCEEEEEeCcc
Q 011848 6 HVHVAILPL--PAVGHVNSMLNLAELLGHAGIKITFLNTEH 44 (476)
Q Consensus 6 ~~~il~~~~--~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (476)
|+|++.++. |+-|-..-...||..|+++|++|.++-...
T Consensus 1 M~~~i~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (237)
T 1g3q_A 1 MGRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDL 41 (237)
T ss_dssp CCEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CceEEEEecCCCCCCHHHHHHHHHHHHHhcCCeEEEEeCCC
Confidence 345544433 678999999999999999999999997643
No 166
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=50.96 E-value=10 Score=29.49 Aligned_cols=32 Identities=25% Similarity=0.388 Sum_probs=24.2
Q ss_pred ccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 6 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
.|||+++-. |.+ -..+++.|.++||+|+++..
T Consensus 4 ~m~i~IiG~---G~i--G~~~a~~L~~~g~~v~~~d~ 35 (140)
T 1lss_A 4 GMYIIIAGI---GRV--GYTLAKSLSEKGHDIVLIDI 35 (140)
T ss_dssp -CEEEEECC---SHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECC---CHH--HHHHHHHHHhCCCeEEEEEC
Confidence 468988843 544 34678999999999999875
No 167
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=50.75 E-value=11 Score=32.99 Aligned_cols=34 Identities=26% Similarity=0.303 Sum_probs=28.9
Q ss_pred CccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCc
Q 011848 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTE 43 (476)
Q Consensus 5 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 43 (476)
.+|||.|+-.|..|- .||+.|+++||+|+.+...
T Consensus 5 ~~mkI~IIG~G~~G~-----sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTV-----NMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp CCCEEEEECCSCCCS-----CHHHHHHHTTCEEEECSSG
T ss_pred CCcEEEEEeeCHHHH-----HHHHHHHHCCCEEEEecCH
Confidence 457999999999985 5899999999999987663
No 168
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=49.97 E-value=10 Score=26.38 Aligned_cols=48 Identities=15% Similarity=0.194 Sum_probs=33.1
Q ss_pred hCCceeccccccchhhhhH---hhhcceeeeEEeccccCHHHHHHHHHHHHh
Q 011848 380 AGMPMICWPSFADQQINSR---FVGEVWKLGLDIKDLCDRNIVEKAVNDLMV 428 (476)
Q Consensus 380 ~GvP~l~~P~~~DQ~~na~---r~~e~~G~g~~~~~~~~~~~l~~ai~~~l~ 428 (476)
+|+|.++.-..+.|.+.-. .. ++-|+.-.+-+.-++++|.+.+++.|.
T Consensus 50 ngkplvvfvngasqndvnefqnea-kkegvsydvlkstdpeeltqrvreflk 100 (112)
T 2lnd_A 50 NGKPLVVFVNGASQNDVNEFQNEA-KKEGVSYDVLKSTDPEELTQRVREFLK 100 (112)
T ss_dssp CCSCEEEEECSCCHHHHHHHHHHH-HHHTCEEEEEECCCHHHHHHHHHHHHH
T ss_pred cCCeEEEEecCcccccHHHHHHHH-HhcCcchhhhccCCHHHHHHHHHHHHH
Confidence 5899988877776654222 12 223555555478899999999998876
No 169
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=49.67 E-value=14 Score=32.75 Aligned_cols=44 Identities=20% Similarity=0.372 Sum_probs=31.2
Q ss_pred CCCCCccEEEEE-cCCCccCHHHHHHHHHHHHhCCCEEEEEeCcc
Q 011848 1 MEKQDHVHVAIL-PLPAVGHVNSMLNLAELLGHAGIKITFLNTEH 44 (476)
Q Consensus 1 m~~~~~~~il~~-~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (476)
|.+.+|..|+|. +-|+-|-..-...||..|+++|++|.++-...
T Consensus 1 m~~~~~~vI~v~s~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~ 45 (257)
T 1wcv_1 1 MLRAKVRRIALANQKGGVGKTTTAINLAAYLARLGKRVLLVDLDP 45 (257)
T ss_dssp ----CCCEEEECCSSCCHHHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCCCCCEEEEEEeCCCCchHHHHHHHHHHHHHHCCCCEEEEECCC
Confidence 555444344444 34678999999999999999999999997654
No 170
>1mio_A Nitrogenase molybdenum iron protein (alpha chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=49.62 E-value=1e+02 Score=30.61 Aligned_cols=35 Identities=6% Similarity=-0.089 Sum_probs=28.1
Q ss_pred HHHHHHHHcCCCCceEEEecCCcccHHHHHHHhCCceEEE
Q 011848 99 PLLKEMVSDSKSPVNCIITDGYMSRAIDAAREVGVSIIYF 138 (476)
Q Consensus 99 ~~~~~ll~~~~~~~D~Ii~D~~~~~~~~~A~~lgiP~v~~ 138 (476)
..+.+++++. +||++|.... ...+|+++|||++.+
T Consensus 446 ~el~~~i~~~--~pDl~ig~~~---~~~~a~k~gIP~~~~ 480 (533)
T 1mio_A 446 HDMEVVLEKL--KPDMFFAGIK---EKFVIQKGGVLSKQL 480 (533)
T ss_dssp HHHHHHHHHH--CCSEEEECHH---HHHHHHHTTCEEEET
T ss_pred HHHHHHHHhc--CCCEEEcccc---hhHHHHhcCCCEEEe
Confidence 3467778876 9999998743 678999999999864
No 171
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=49.56 E-value=8.3 Score=33.66 Aligned_cols=31 Identities=16% Similarity=0.225 Sum_probs=23.8
Q ss_pred CceEEE-ecCCcc-cHHHHHHHhCCceEEEecc
Q 011848 111 PVNCII-TDGYMS-RAIDAAREVGVSIIYFRTI 141 (476)
Q Consensus 111 ~~D~Ii-~D~~~~-~~~~~A~~lgiP~v~~~~~ 141 (476)
.||+|| .|+..- .+..=|.++|||+|.+.-+
T Consensus 157 ~Pdll~v~Dp~~e~~ai~EA~~l~IPvIaivDT 189 (231)
T 3bbn_B 157 LPDIVIIVDQQEEYTALRECITLGIPTICLIDT 189 (231)
T ss_dssp CCSEEEESCTTTTHHHHHHHHTTTCCEEECCCS
T ss_pred CCCEEEEeCCccccHHHHHHHHhCCCEEEEecC
Confidence 699877 666443 5777799999999998655
No 172
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=49.48 E-value=15 Score=34.76 Aligned_cols=38 Identities=13% Similarity=0.089 Sum_probs=29.9
Q ss_pred CccEEEEEcCCCccC----HHHHHHHHHHH-HhCCCEEEEEeC
Q 011848 5 DHVHVAILPLPAVGH----VNSMLNLAELL-GHAGIKITFLNT 42 (476)
Q Consensus 5 ~~~~il~~~~~~~GH----~~p~l~La~~L-~~rGH~Vt~~~~ 42 (476)
.++||+++..|..+- +.....+.++| .++||+|+.+..
T Consensus 2 ~k~~v~vl~gG~s~E~~vSl~s~~~v~~al~~~~g~~v~~i~~ 44 (377)
T 1ehi_A 2 TKKRVALIFGGNSSEHDVSKRSAQNFYNAIEATGKYEIIVFAI 44 (377)
T ss_dssp -CEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHSSEEEEEEEE
T ss_pred CCcEEEEEeCCCCCCcceeHHHHHHHHHHhCcccCcEEEEEEE
Confidence 467999998876553 34578889999 999999999864
No 173
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=48.94 E-value=14 Score=33.68 Aligned_cols=39 Identities=13% Similarity=0.107 Sum_probs=24.2
Q ss_pred CCCCCcc-EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCc
Q 011848 1 MEKQDHV-HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTE 43 (476)
Q Consensus 1 m~~~~~~-~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 43 (476)
|..+.|+ +|++. |+.|.+ -..|+++|.++||+|+.++-.
T Consensus 5 m~~~~m~~~ilVt--GatG~i--G~~l~~~L~~~g~~V~~l~R~ 44 (318)
T 2r6j_A 5 MEENGMKSKILIF--GGTGYI--GNHMVKGSLKLGHPTYVFTRP 44 (318)
T ss_dssp ----CCCCCEEEE--TTTSTT--HHHHHHHHHHTTCCEEEEECT
T ss_pred ccccCCCCeEEEE--CCCchH--HHHHHHHHHHCCCcEEEEECC
Confidence 4444554 55544 334443 457889999999999988754
No 174
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=48.91 E-value=9.8 Score=34.75 Aligned_cols=33 Identities=24% Similarity=0.223 Sum_probs=27.0
Q ss_pred CccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 5 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
.+|||.|+-.|..|. .+|+.|+++||+|++...
T Consensus 6 ~~~~I~iIG~G~mG~-----~~a~~l~~~G~~V~~~dr 38 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGM-----GAARSCLRAGLSTWGADL 38 (303)
T ss_dssp -CCEEEEECCSHHHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCCeEEEECCCHHHH-----HHHHHHHHCCCeEEEEEC
Confidence 357999998777764 689999999999998865
No 175
>1wrd_A TOM1, target of MYB protein 1; three-helix bundle, ubiquitin-binding protein, protein trans signaling protein complex; 1.75A {Homo sapiens} SCOP: a.7.8.1
Probab=48.80 E-value=47 Score=24.71 Aligned_cols=48 Identities=10% Similarity=0.094 Sum_probs=31.4
Q ss_pred ccCHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 011848 413 LCDRNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIK 467 (476)
Q Consensus 413 ~~~~~~l~~ai~~~l~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~i~~l~ 467 (476)
.++++++.+...++ ...+.+++-|.+.+.+ ..+|+.... =.+++.+|.
T Consensus 2 ~~~~eq~~k~~~el-----~~v~~n~~lL~EML~~-~~p~~~~~~-~~el~~eL~ 49 (103)
T 1wrd_A 2 PLGSEQIGKLRSEL-----EMVSGNVRVMSEMLTE-LVPTQAEPA-DLELLQELN 49 (103)
T ss_dssp CSSSTTHHHHHHHH-----HHHHHHHHHHHHHHHH-SCTTTCCHH-HHHHHHHHH
T ss_pred CCCHHHHHHHHHHH-----HHHHHHHHHHHHHHHh-cCCCCCCcc-cHHHHHHHH
Confidence 46778887777777 6788999999988887 455543211 134555443
No 176
>3goc_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: YES; 1.60A {Streptomyces avermitilis}
Probab=48.54 E-value=27 Score=30.43 Aligned_cols=41 Identities=22% Similarity=0.242 Sum_probs=32.4
Q ss_pred cHHHHHHHHcCCCCceEEEecCCcc-------cHHHHHHHhCCceEEE
Q 011848 98 PPLLKEMVSDSKSPVNCIITDGYMS-------RAIDAAREVGVSIIYF 138 (476)
Q Consensus 98 ~~~~~~ll~~~~~~~D~Ii~D~~~~-------~~~~~A~~lgiP~v~~ 138 (476)
.+.+.+.++++..+||+|++|..-. -|..+...+|+|+|-+
T Consensus 94 ~P~ll~al~~L~~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGV 141 (237)
T 3goc_A 94 IPTVLAALDALPCPPGLIVCDGYGVAHPRRFGLASHLGVLTGLPTIGV 141 (237)
T ss_dssp HHHHHHHHHTSSSCCSEEEEESCSSCSTTSCCHHHHHHHHHCSCEEEE
T ss_pred HHHHHHHHHhcCCCCCEEEEeCceeecCCCcchhheeeeecCCCEEee
Confidence 3556666777756899999998755 5778888999999987
No 177
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=48.45 E-value=22 Score=29.61 Aligned_cols=33 Identities=27% Similarity=0.341 Sum_probs=23.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCc
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTE 43 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 43 (476)
|+|++. |+.|. --..|+++|.++||+|+.++-.
T Consensus 4 ~~ilVt--GatG~--iG~~l~~~l~~~g~~V~~~~r~ 36 (206)
T 1hdo_A 4 KKIAIF--GATGQ--TGLTTLAQAVQAGYEVTVLVRD 36 (206)
T ss_dssp CEEEEE--STTSH--HHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEE--cCCcH--HHHHHHHHHHHCCCeEEEEEeC
Confidence 466665 34443 3567899999999999998753
No 178
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=48.28 E-value=16 Score=33.62 Aligned_cols=39 Identities=18% Similarity=0.392 Sum_probs=31.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCccchhhHhh
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIR 51 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~ 51 (476)
|||+|+-.|+.|- .+|..|++.||+|+++.... .+.+.+
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L~~~g~~V~~~~r~~-~~~i~~ 41 (320)
T 3i83_A 3 LNILVIGTGAIGS-----FYGALLAKTGHCVSVVSRSD-YETVKA 41 (320)
T ss_dssp CEEEEESCCHHHH-----HHHHHHHHTTCEEEEECSTT-HHHHHH
T ss_pred CEEEEECcCHHHH-----HHHHHHHhCCCeEEEEeCCh-HHHHHh
Confidence 5999998888874 57889999999999998755 455544
No 179
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=48.10 E-value=48 Score=32.43 Aligned_cols=99 Identities=12% Similarity=0.158 Sum_probs=52.9
Q ss_pred CccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCccchhhHhhcccccccccccCCCeeEEEcCC--CCCCCCCC-
Q 011848 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTD--GLPRDHPR- 81 (476)
Q Consensus 5 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~- 81 (476)
.++|-+|++. .+=.-.+.+|+.|.+.|.++. ++....+.+.+. | +.+..+.+ ++|+---.
T Consensus 8 ~~i~~aLISV---sDK~glvelAk~L~~lGfeI~--ATgGTak~L~e~-G-----------I~v~~V~~vTgfPEil~GR 70 (523)
T 3zzm_A 8 RPIRRALISV---YDKTGLVDLAQGLSAAGVEII--STGSTAKTIADT-G-----------IPVTPVEQLTGFPEVLDGR 70 (523)
T ss_dssp CCCCEEEEEE---SSCTTHHHHHHHHHHTTCEEE--ECHHHHHHHHTT-T-----------CCCEEHHHHHSCCCCTTTT
T ss_pred ccccEEEEEE---eccccHHHHHHHHHHCCCEEE--EcchHHHHHHHc-C-----------CceeeccccCCCchhhCCc
Confidence 3444444444 355668999999999999875 443445566554 3 44444332 44432111
Q ss_pred -CCCChHHHHHHHHh-hC-cHHHHHHHHcCC-CCceEEEecCCcc
Q 011848 82 -TPDKFPELVDSLNC-AT-PPLLKEMVSDSK-SPVNCIITDGYMS 122 (476)
Q Consensus 82 -~~~~~~~~~~~~~~-~~-~~~~~~ll~~~~-~~~D~Ii~D~~~~ 122 (476)
.+-.++ ..+.+.. +- ...+.+ +++.+ .+.|+||++.+-+
T Consensus 71 VKTLHP~-ihgGiLa~r~~~~h~~~-l~~~~i~~iDlVvvNLYPF 113 (523)
T 3zzm_A 71 VKTLHPR-VHAGLLADLRKSEHAAA-LEQLGIEAFELVVVNLYPF 113 (523)
T ss_dssp SSSCSHH-HHHHHHCCTTSHHHHHH-HHHHTCCCCSEEEEECCCH
T ss_pred cccCCch-hhhhhccCCCCHHHHHH-HHHCCCCceeEEEEeCCCh
Confidence 222333 3343333 32 333333 33433 5899999995543
No 180
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=47.91 E-value=16 Score=32.93 Aligned_cols=31 Identities=19% Similarity=0.316 Sum_probs=25.3
Q ss_pred ccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEe
Q 011848 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLN 41 (476)
Q Consensus 6 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~ 41 (476)
||||+|+-.|..|. .+|+.|.+.||+|+++.
T Consensus 3 ~m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~ 33 (295)
T 1yb4_A 3 AMKLGFIGLGIMGS-----PMAINLARAGHQLHVTT 33 (295)
T ss_dssp -CEEEECCCSTTHH-----HHHHHHHHTTCEEEECC
T ss_pred CCEEEEEccCHHHH-----HHHHHHHhCCCEEEEEc
Confidence 67999998888875 46888999999998765
No 181
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=47.48 E-value=32 Score=33.27 Aligned_cols=42 Identities=12% Similarity=0.295 Sum_probs=35.6
Q ss_pred ccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCccchh
Q 011848 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYD 47 (476)
Q Consensus 6 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~ 47 (476)
+..|+++..++.|-..-...||..|+++|++|.++....++.
T Consensus 100 p~vIlivG~~G~GKTTt~~kLA~~l~~~G~kVllv~~D~~R~ 141 (443)
T 3dm5_A 100 PTILLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRP 141 (443)
T ss_dssp SEEEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCCSST
T ss_pred CeEEEEECcCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCcch
Confidence 346677777899999999999999999999999999866544
No 182
>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*
Probab=47.06 E-value=47 Score=32.04 Aligned_cols=34 Identities=15% Similarity=0.061 Sum_probs=24.8
Q ss_pred ccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCcc
Q 011848 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEH 44 (476)
Q Consensus 6 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (476)
|.||+++-.+. -.+.+++++++.|++|.++.+..
T Consensus 6 ~~kiLI~g~g~-----~a~~i~~aa~~~G~~~v~v~~~~ 39 (446)
T 3ouz_A 6 IKSILIANRGE-----IALRALRTIKEMGKKAICVYSEA 39 (446)
T ss_dssp CCEEEECCCHH-----HHHHHHHHHHHTTCEEEEEEEGG
T ss_pred cceEEEECCCH-----HHHHHHHHHHHcCCEEEEEEcCc
Confidence 44788754332 45789999999999998886543
No 183
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=46.91 E-value=19 Score=30.19 Aligned_cols=38 Identities=11% Similarity=0.207 Sum_probs=28.3
Q ss_pred ccEEEEEcCCCccCHHHHHH-HHHHHHhCCCEEEEEeCcc
Q 011848 6 HVHVAILPLPAVGHVNSMLN-LAELLGHAGIKITFLNTEH 44 (476)
Q Consensus 6 ~~~il~~~~~~~GH~~p~l~-La~~L~~rGH~Vt~~~~~~ 44 (476)
||||+++... .|+..-+.. +++.|.+.|++|.++....
T Consensus 4 mmkilii~~S-~g~T~~la~~i~~~l~~~g~~v~~~~l~~ 42 (199)
T 2zki_A 4 KPNILVLFYG-YGSIVELAKEIGKGAEEAGAEVKIRRVRE 42 (199)
T ss_dssp CCEEEEEECC-SSHHHHHHHHHHHHHHHHSCEEEEEECCC
T ss_pred CcEEEEEEeC-ccHHHHHHHHHHHHHHhCCCEEEEEehhH
Confidence 6799888888 888765544 4666777899999887543
No 184
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=46.55 E-value=25 Score=31.02 Aligned_cols=32 Identities=22% Similarity=0.327 Sum_probs=26.2
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 8 ~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
|+++++.++.| --.++++.|+++|++|.++..
T Consensus 30 k~vlITGas~g---IG~~la~~l~~~G~~V~~~~r 61 (262)
T 3rkr_A 30 QVAVVTGASRG---IGAAIARKLGSLGARVVLTAR 61 (262)
T ss_dssp CEEEESSTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCh---HHHHHHHHHHHCCCEEEEEEC
Confidence 77888887764 457889999999999988865
No 185
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=45.92 E-value=90 Score=26.25 Aligned_cols=97 Identities=11% Similarity=-0.007 Sum_probs=57.0
Q ss_pred ccchhhhhhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhCCCcEEEEEcCCCCCCCCCCCCCchHHHHHhcCCceee
Q 011848 269 IDRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIA 348 (476)
Q Consensus 269 ~~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~ 348 (476)
.-.++.++|.+ ++..+|+.|... ...+..++....+-+.+=++.... -+..+ ....+.
T Consensus 46 ~A~~lg~~LA~---~G~~vVsGg~~G-----iM~aa~~gAl~~GG~~iGVlP~e~---------~~~~~-----~~~~~~ 103 (195)
T 1rcu_A 46 ICLELGRTLAK---KGYLVFNGGRDG-----VMELVSQGVREAGGTVVGILPDEE---------AGNPY-----LSVAVK 103 (195)
T ss_dssp HHHHHHHHHHH---TTCEEEECCSSH-----HHHHHHHHHHHTTCCEEEEESTTC---------CCCTT-----CSEEEE
T ss_pred HHHHHHHHHHH---CCCEEEeCCHHH-----HHHHHHHHHHHcCCcEEEEeCCcc---------cCCCC-----cceeee
Confidence 34567788874 566667744443 445556666666667666664321 11110 222232
Q ss_pred --eccCH--HHHhCcCCCCccccccChhHHHHH---HHhCCceeccc
Q 011848 349 --GWVPQ--EEVLAHSAVGGFLTHCGWNSTLES---IVAGMPMICWP 388 (476)
Q Consensus 349 --~~vp~--~~ll~~~~~~~~I~HgG~gs~~ea---l~~GvP~l~~P 388 (476)
...+. ..+...++. .++--||.||+-|+ +.+++|+++++
T Consensus 104 ~~~~f~~Rk~~m~~~sda-~IvlpGG~GTL~E~~eal~~~kPV~lln 149 (195)
T 1rcu_A 104 TGLDFQMRSFVLLRNADV-VVSIGGEIGTAIEILGAYALGKPVILLR 149 (195)
T ss_dssp CCCCHHHHHHHHHTTCSE-EEEESCCHHHHHHHHHHHHTTCCEEEET
T ss_pred cCCCHHHHHHHHHHhCCE-EEEecCCCcHHHHHHHHHhcCCCEEEEC
Confidence 23453 234455664 67778999987765 67999999996
No 186
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=45.55 E-value=14 Score=35.06 Aligned_cols=30 Identities=37% Similarity=0.443 Sum_probs=25.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEe
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLN 41 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~ 41 (476)
|||+|+-.|--| +.+|..|+++||+|+++-
T Consensus 2 m~V~IVGaGpaG-----l~~A~~L~~~G~~v~v~E 31 (412)
T 4hb9_A 2 MHVGIIGAGIGG-----TCLAHGLRKHGIKVTIYE 31 (412)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEEC
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCCEEEEe
Confidence 589998776444 889999999999999984
No 187
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=45.40 E-value=14 Score=33.88 Aligned_cols=37 Identities=19% Similarity=0.067 Sum_probs=28.4
Q ss_pred EEEEcCCCccCH--------------HHHHHHHHHHHhCCCEEEEEeCccc
Q 011848 9 VAILPLPAVGHV--------------NSMLNLAELLGHAGIKITFLNTEHY 45 (476)
Q Consensus 9 il~~~~~~~GH~--------------~p~l~La~~L~~rGH~Vt~~~~~~~ 45 (476)
|++..+|++=.+ ..-.+||+++.++|++|+|++.+..
T Consensus 40 VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~s 90 (313)
T 1p9o_A 40 VLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARS 90 (313)
T ss_dssp EEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTS
T ss_pred EEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCC
Confidence 666666665444 2567899999999999999998653
No 188
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=45.35 E-value=21 Score=31.64 Aligned_cols=38 Identities=24% Similarity=0.263 Sum_probs=32.3
Q ss_pred ccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCc
Q 011848 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTE 43 (476)
Q Consensus 6 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 43 (476)
|..|+|..-|+-|-..-...||..|+++|++|.++-..
T Consensus 1 M~vI~vs~KGGvGKTT~a~nLA~~la~~G~~VlliD~D 38 (269)
T 1cp2_A 1 MRQVAIYGKGGIGKSTTTQNLTSGLHAMGKTIMVVGCD 38 (269)
T ss_dssp CEEEEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEEEC
T ss_pred CcEEEEecCCCCcHHHHHHHHHHHHHHCCCcEEEEcCC
Confidence 34677766788999999999999999999999998654
No 189
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=45.33 E-value=42 Score=25.37 Aligned_cols=39 Identities=13% Similarity=0.118 Sum_probs=31.5
Q ss_pred CCccEEEEEcCCCccCHHH-HHHHHHHHHhCCCEEEEEeC
Q 011848 4 QDHVHVAILPLPAVGHVNS-MLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 4 ~~~~~il~~~~~~~GH~~p-~l~La~~L~~rGH~Vt~~~~ 42 (476)
.+|.||+++|..+.|.-.- .-.|-+.+.++|.++.+-..
T Consensus 19 ~~~kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~~~V~~~ 58 (113)
T 1tvm_A 19 GSKRKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQC 58 (113)
T ss_dssp CSSEEEEEESCSCSSHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred ccccEEEEECCCCHHHHHHHHHHHHHHHHHcCCeEEEEEe
Confidence 3577999999999999884 67788888899998755543
No 190
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=45.30 E-value=1.8e+02 Score=26.42 Aligned_cols=100 Identities=11% Similarity=0.119 Sum_probs=56.3
Q ss_pred EEEEEcCCCcc---CH--HHHHHHHHHHHhCCCEEEEEeCccchhhHhhcccccccccccCCC---eeEEEcCCCCCCCC
Q 011848 8 HVAILPLPAVG---HV--NSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPG---FQFKTLTDGLPRDH 79 (476)
Q Consensus 8 ~il~~~~~~~G---H~--~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 79 (476)
.|++.|....+ .+ .-+..+++.|.++|++|.+++++...+...+.... .+. .....+.
T Consensus 182 ~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~~~~vvl~g~~~e~~~~~~i~~~-------~~~~~~~~~~~l~------- 247 (348)
T 1psw_A 182 MIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSAKDHEAGNEILAA-------LNTEQQAWCRNLA------- 247 (348)
T ss_dssp EEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEECCCGGGHHHHHHHHTT-------SCHHHHTTEEECT-------
T ss_pred EEEEECCCCccccCCCCHHHHHHHHHHHHHCCCeEEEEeChhhHHHHHHHHHh-------hhhccccceEecc-------
Confidence 56666654232 22 36889999999999999988765533222211000 000 0011110
Q ss_pred CCCCCChHHHHHHHHhhCcHHHHHHHHcCCCCceEEEecCCcccHHHHHHHhCCceEEEecc
Q 011848 80 PRTPDKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMSRAIDAAREVGVSIIYFRTI 141 (476)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~D~Ii~D~~~~~~~~~A~~lgiP~v~~~~~ 141 (476)
+ ......+..+++ ..|++|+.- .+...+|..+|+|+|.++..
T Consensus 248 ----g----------~~sl~e~~ali~----~a~l~I~~D--sg~~HlAaa~g~P~v~lfg~ 289 (348)
T 1psw_A 248 ----G----------ETQLDQAVILIA----ACKAIVTND--SGLMHVAAALNRPLVALYGP 289 (348)
T ss_dssp ----T----------TSCHHHHHHHHH----TSSEEEEES--SHHHHHHHHTTCCEEEEESS
T ss_pred ----C----------cCCHHHHHHHHH----hCCEEEecC--CHHHHHHHHcCCCEEEEECC
Confidence 0 001233445666 678988642 45677899999999988543
No 191
>3rpe_A MDAB, modulator of drug activity B; structural genomics, center for structural genomics of infec diseases, csgid, flavodoxin-like fold; HET: FAD; 1.10A {Yersinia pestis}
Probab=45.08 E-value=23 Score=30.59 Aligned_cols=40 Identities=20% Similarity=0.301 Sum_probs=24.5
Q ss_pred CCCccEEEEEcC-CCc----cCHHHHH--HHHHHHHhCCCEEEEEeC
Q 011848 3 KQDHVHVAILPL-PAV----GHVNSML--NLAELLGHAGIKITFLNT 42 (476)
Q Consensus 3 ~~~~~~il~~~~-~~~----GH~~p~l--~La~~L~~rGH~Vt~~~~ 42 (476)
++.||||+++.. |-. |-++-.+ .+++.|.+.||+|.++-.
T Consensus 22 ~~~M~kiLiI~gsp~~~~s~~s~n~~L~~~~~~~l~~~g~ev~~~dL 68 (218)
T 3rpe_A 22 SNAMSNVLIINAMKEFAHSKGALNLTLTNVAADFLRESGHQVKITTV 68 (218)
T ss_dssp --CCCCEEEEECCCCBTTBCSHHHHHHHHHHHHHHHHTTCCEEEEEG
T ss_pred cccCcceEEEEeCCCcccCCChHHHHHHHHHHHHHhhCCCEEEEEEC
Confidence 356888877764 532 3344332 356666778999998765
No 192
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=45.01 E-value=29 Score=29.82 Aligned_cols=37 Identities=19% Similarity=0.214 Sum_probs=25.4
Q ss_pred CCCCCccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 1 MEKQDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 1 m~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
|..| .|.++++.++.| --..+++.|+++||+|+++..
T Consensus 1 M~~~--~k~vlVtGasgg---iG~~~a~~l~~~G~~V~~~~r 37 (234)
T 2ehd_A 1 MEGM--KGAVLITGASRG---IGEATARLLHAKGYRVGLMAR 37 (234)
T ss_dssp ---C--CCEEEESSTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCC--CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEEC
Confidence 5443 366777766542 356899999999999998875
No 193
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=44.96 E-value=30 Score=29.91 Aligned_cols=41 Identities=15% Similarity=0.140 Sum_probs=31.5
Q ss_pred HHHHHHHHcCCCCceEEEecCCcc-------cHHHHHHHhCCceEEEe
Q 011848 99 PLLKEMVSDSKSPVNCIITDGYMS-------RAIDAAREVGVSIIYFR 139 (476)
Q Consensus 99 ~~~~~ll~~~~~~~D~Ii~D~~~~-------~~~~~A~~lgiP~v~~~ 139 (476)
+.+.+.++++..+||+|++|.... -|..+...+|+|+|-+.
T Consensus 91 P~~l~al~~L~~~PdlllvDG~Gi~HpR~~GlA~HlGv~l~~PtIGVA 138 (225)
T 2w36_A 91 PLFLKAWEKLRTKPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGVA 138 (225)
T ss_dssp HHHHHHHTTCCSCCSEEEEESCSSSSTTSCCHHHHHHHHHTSCEEEEE
T ss_pred HHHHHHHHhcCCCCCEEEEeCeEEEcCCCCCchhhhhhhhCCCEEEEE
Confidence 445666777756899999998765 36677888899999873
No 194
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=44.72 E-value=12 Score=36.82 Aligned_cols=35 Identities=20% Similarity=0.368 Sum_probs=28.4
Q ss_pred CCCccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 3 KQDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 3 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
+|+||+|.|+-.|.+| ..||..|+++||+|++...
T Consensus 1 s~~~~kIgiIGlG~MG-----~~lA~~L~~~G~~V~v~dr 35 (484)
T 4gwg_A 1 SNAQADIALIGLAVMG-----QNLILNMNDHGFVVCAFNR 35 (484)
T ss_dssp --CCBSEEEECCSHHH-----HHHHHHHHHTTCCEEEECS
T ss_pred CCCCCEEEEEChhHHH-----HHHHHHHHHCCCEEEEEeC
Confidence 3567899999888777 4689999999999998865
No 195
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=44.68 E-value=14 Score=33.39 Aligned_cols=32 Identities=28% Similarity=0.327 Sum_probs=27.0
Q ss_pred ccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 6 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
|+||.|+-.|..|. .+|+.|+++||+|++...
T Consensus 1 M~~I~iiG~G~mG~-----~~a~~l~~~G~~V~~~dr 32 (287)
T 3pdu_A 1 MTTYGFLGLGIMGG-----PMAANLVRAGFDVTVWNR 32 (287)
T ss_dssp CCCEEEECCSTTHH-----HHHHHHHHHTCCEEEECS
T ss_pred CCeEEEEccCHHHH-----HHHHHHHHCCCeEEEEcC
Confidence 56999998888874 578999999999998865
No 196
>3io3_A DEHA2D07832P; chaperone, membrane traffic, ATPase; HET: ADP; 1.80A {Debaryomyces hansenii}
Probab=44.66 E-value=67 Score=29.90 Aligned_cols=39 Identities=13% Similarity=0.172 Sum_probs=33.4
Q ss_pred ccEEEEEcC-CCccCHHHHHHHHHHHH--hCCCEEEEEeCcc
Q 011848 6 HVHVAILPL-PAVGHVNSMLNLAELLG--HAGIKITFLNTEH 44 (476)
Q Consensus 6 ~~~il~~~~-~~~GH~~p~l~La~~L~--~rGH~Vt~~~~~~ 44 (476)
.+||+|++. |+-|-..-...||..|+ ++|++|.++....
T Consensus 17 ~~~i~~~~gkGGvGKTt~a~~lA~~la~~~~g~~vllid~D~ 58 (348)
T 3io3_A 17 SLKWIFVGGKGGVGKTTTSSSVAVQLALAQPNEQFLLISTDP 58 (348)
T ss_dssp TCSEEEEECSTTSSHHHHHHHHHHHHHHHCTTSCEEEEECCS
T ss_pred CcEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCCeEEEEECCC
Confidence 347776665 78899999999999999 8999999999863
No 197
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=44.49 E-value=19 Score=32.61 Aligned_cols=34 Identities=15% Similarity=0.056 Sum_probs=24.4
Q ss_pred ccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCc
Q 011848 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTE 43 (476)
Q Consensus 6 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 43 (476)
|++|++. |+.|.+ -..|+++|.++||+|+.++-.
T Consensus 4 ~~~ilVt--GatG~i--G~~l~~~L~~~g~~V~~~~R~ 37 (313)
T 1qyd_A 4 KSRVLIV--GGTGYI--GKRIVNASISLGHPTYVLFRP 37 (313)
T ss_dssp CCCEEEE--STTSTT--HHHHHHHHHHTTCCEEEECCS
T ss_pred CCEEEEE--cCCcHH--HHHHHHHHHhCCCcEEEEECC
Confidence 4577665 344444 356889999999999988754
No 198
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=44.43 E-value=64 Score=27.66 Aligned_cols=102 Identities=15% Similarity=0.041 Sum_probs=54.5
Q ss_pred chhhhhhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhCCCcEEEEEcCCCCCCCCCCCCCchHHHHHhcCCceeeec
Q 011848 271 RSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGW 350 (476)
Q Consensus 271 ~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~ 350 (476)
.++.++|.+ ++...|+.|... .......++....+-+.+=++.... .+....+.......+...
T Consensus 35 ~~lg~~LA~---~G~~vVsGGg~~----GiM~aa~~gAl~~GG~tiGVlP~~~---------~~~e~~~~~~~~~~~~~~ 98 (215)
T 2a33_A 35 VDLGNELVS---RNIDLVYGGGSI----GLMGLVSQAVHDGGRHVIGIIPKTL---------MPRELTGETVGEVRAVAD 98 (215)
T ss_dssp HHHHHHHHH---TTCEEEECCCSS----HHHHHHHHHHHHTTCCEEEEEESSC---------C--------CCEEEEESS
T ss_pred HHHHHHHHH---CCCEEEECCChh----hHhHHHHHHHHHcCCcEEEEcchHh---------cchhhccCCCCceeecCC
Confidence 456677764 466677766531 1334455555555555555554221 111110000112344555
Q ss_pred cCHHH--HhCcCCCCccccccChhHHHHHHH---------hCCceecccc
Q 011848 351 VPQEE--VLAHSAVGGFLTHCGWNSTLESIV---------AGMPMICWPS 389 (476)
Q Consensus 351 vp~~~--ll~~~~~~~~I~HgG~gs~~eal~---------~GvP~l~~P~ 389 (476)
++.+. +...++. .++--||.||+-|... +++|++++-.
T Consensus 99 f~~Rk~~~~~~sda-~VvlpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 147 (215)
T 2a33_A 99 MHQRKAEMAKHSDA-FIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 147 (215)
T ss_dssp HHHHHHHHHHTCSE-EEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECG
T ss_pred HHHHHHHHHHhCCE-EEEeCCCCchHHHHHHHHHHHHhCCCCCCeEEecC
Confidence 66533 4445553 6778899999988762 3899988864
No 199
>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}
Probab=44.28 E-value=31 Score=31.46 Aligned_cols=38 Identities=18% Similarity=0.097 Sum_probs=28.1
Q ss_pred CCCCCc-cEEEEEcCC--CccCHHHHHHHHHHHHhCCCEEEEEe
Q 011848 1 MEKQDH-VHVAILPLP--AVGHVNSMLNLAELLGHAGIKITFLN 41 (476)
Q Consensus 1 m~~~~~-~~il~~~~~--~~GH~~p~l~La~~L~~rGH~Vt~~~ 41 (476)
|.+|++ .|+++++.+ +.| =-.++|+.|+++|++|.++.
T Consensus 2 m~~~~l~~k~~lVTGa~~s~G---IG~aia~~la~~G~~Vv~~~ 42 (319)
T 2ptg_A 2 PLPVDLRGKTAFVAGVADSNG---YGWAICKLLRAAGARVLVGT 42 (319)
T ss_dssp CCCCCCTTCEEEEECCCCTTS---HHHHHHHHHHHTTCEEEEEE
T ss_pred CcccccCCCEEEEeCCCCCCc---HHHHHHHHHHHCCCEEEEEe
Confidence 555443 378888887 444 25689999999999998875
No 200
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=44.19 E-value=1.3e+02 Score=27.80 Aligned_cols=99 Identities=17% Similarity=0.143 Sum_probs=57.5
Q ss_pred EEEEEcCCCcc--C--HHHHHHHHHHHHhCCCEEEEEeCccchhhHhhcccccccccccCCCeeEEEcCCCCCCCCCCCC
Q 011848 8 HVAILPLPAVG--H--VNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLTDGLPRDHPRTP 83 (476)
Q Consensus 8 ~il~~~~~~~G--H--~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (476)
-|++.|..+.. . ..-+..|++.|.++|++|.+++++...+...+.... .+ -....+. ..
T Consensus 187 ~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl~g~~~e~~~~~~i~~~-------~~-~~~~~l~---------g~ 249 (349)
T 3tov_A 187 LIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVFFGGPMDLEMVQPVVEQ-------ME-TKPIVAT---------GK 249 (349)
T ss_dssp EEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEECCCTTTHHHHHHHHHT-------CS-SCCEECT---------TC
T ss_pred EEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEeCcchHHHHHHHHHh-------cc-cccEEee---------CC
Confidence 46666665432 2 235899999999999999987776544332222100 00 0000000 00
Q ss_pred CChHHHHHHHHhhCcHHHHHHHHcCCCCceEEEecCCcccHHHHHHHhCCceEEEecc
Q 011848 84 DKFPELVDSLNCATPPLLKEMVSDSKSPVNCIITDGYMSRAIDAAREVGVSIIYFRTI 141 (476)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~ll~~~~~~~D~Ii~D~~~~~~~~~A~~lgiP~v~~~~~ 141 (476)
....++..+++ +.|++|+. ..+...+|..+|+|+|.++..
T Consensus 250 ------------~sl~e~~ali~----~a~~~i~~--DsG~~HlAaa~g~P~v~lfg~ 289 (349)
T 3tov_A 250 ------------FQLGPLAAAMN----RCNLLITN--DSGPMHVGISQGVPIVALYGP 289 (349)
T ss_dssp ------------CCHHHHHHHHH----TCSEEEEE--SSHHHHHHHTTTCCEEEECSS
T ss_pred ------------CCHHHHHHHHH----hCCEEEEC--CCCHHHHHHhcCCCEEEEECC
Confidence 11223455555 67888864 245778899999999998654
No 201
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=44.18 E-value=32 Score=30.38 Aligned_cols=39 Identities=26% Similarity=0.215 Sum_probs=27.9
Q ss_pred CCCCCccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 1 MEKQDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 1 m~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
|..|-+.|+++++.++.| =-.++++.|+++||+|.++.-
T Consensus 1 M~~m~~~k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r 39 (267)
T 2gdz_A 1 MAHMVNGKVALVTGAAQG---IGRAFAEALLLKGAKVALVDW 39 (267)
T ss_dssp -CCCCTTCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCcccCCCEEEEECCCCc---HHHHHHHHHHHCCCEEEEEEC
Confidence 555433377788877653 356889999999999998864
No 202
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=44.16 E-value=23 Score=34.76 Aligned_cols=36 Identities=19% Similarity=0.239 Sum_probs=30.5
Q ss_pred CCccEEEEEcCCCccCHHHHHHHHHHHHhC-CC-EEEEEeCcc
Q 011848 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHA-GI-KITFLNTEH 44 (476)
Q Consensus 4 ~~~~~il~~~~~~~GH~~p~l~La~~L~~r-GH-~Vt~~~~~~ 44 (476)
+++|||.|+-.|..| +.+|..|+++ || +|+++....
T Consensus 16 ~~~mkIaVIGlG~mG-----~~lA~~la~~~G~~~V~~~D~~~ 53 (478)
T 3g79_A 16 GPIKKIGVLGMGYVG-----IPAAVLFADAPCFEKVLGFQRNS 53 (478)
T ss_dssp CSCCEEEEECCSTTH-----HHHHHHHHHSTTCCEEEEECCCC
T ss_pred CCCCEEEEECcCHHH-----HHHHHHHHHhCCCCeEEEEECCh
Confidence 357899999999888 5789999999 99 999987543
No 203
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=43.97 E-value=35 Score=30.74 Aligned_cols=39 Identities=18% Similarity=0.241 Sum_probs=25.1
Q ss_pred CCccEEEEE-cCCCccCHHHHH--HHHHHHHhCCCEEEEEeC
Q 011848 4 QDHVHVAIL-PLPAVGHVNSML--NLAELLGHAGIKITFLNT 42 (476)
Q Consensus 4 ~~~~~il~~-~~~~~GH~~p~l--~La~~L~~rGH~Vt~~~~ 42 (476)
|++|||+++ .+|-..-.+-.+ ...+.|.++||+|+++--
T Consensus 20 m~~MKiLII~aHP~~~S~n~aL~~~~~~~l~~~G~eV~v~DL 61 (280)
T 4gi5_A 20 FQSMKVLLIYAHPEPRSLNGALKNFAIRHLQQAGHEVQVSDL 61 (280)
T ss_dssp --CCEEEEEECCSCTTSHHHHHHHHHHHHHHHTTCEEEEEET
T ss_pred hhCCeEEEEEeCCCCccHHHHHHHHHHHHHHHCCCeEEEEEc
Confidence 556787555 556555454433 457788899999999864
No 204
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=43.97 E-value=23 Score=31.80 Aligned_cols=33 Identities=24% Similarity=0.296 Sum_probs=27.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
.|+++++.++.| --.++|+.|+++|++|.+...
T Consensus 25 ~k~~lVTGas~G---IG~~ia~~la~~G~~V~~~~r 57 (281)
T 3v2h_A 25 TKTAVITGSTSG---IGLAIARTLAKAGANIVLNGF 57 (281)
T ss_dssp TCEEEEETCSSH---HHHHHHHHHHHTTCEEEEECC
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 478888888765 456899999999999998764
No 205
>2fb6_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.46A {Bacteroides thetaiotaomicron}
Probab=43.89 E-value=22 Score=27.23 Aligned_cols=38 Identities=16% Similarity=0.001 Sum_probs=27.9
Q ss_pred cEEEEEcCCCccCH--HHHHHHHHHHHhCC--CEEEEEeCcc
Q 011848 7 VHVAILPLPAVGHV--NSMLNLAELLGHAG--IKITFLNTEH 44 (476)
Q Consensus 7 ~~il~~~~~~~GH~--~p~l~La~~L~~rG--H~Vt~~~~~~ 44 (476)
+|++|+-...--.. +..+..|....++| |+|.++....
T Consensus 8 ~K~~ivi~s~d~~~~~~~al~~A~~a~~~G~~~eV~i~~~G~ 49 (117)
T 2fb6_A 8 DKLTILWTTDNKDTVFNMLAMYALNSKNRGWWKHINIILWGA 49 (117)
T ss_dssp SEEEEEECCCCHHHHHHTHHHHHHHHHHHTSCSEEEEEECSH
T ss_pred CeEEEEEEcCChHHHHHHHHHHHHHHHHcCCCCcEEEEEECC
Confidence 68877766543222 34778899999999 8999998755
No 206
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=43.78 E-value=52 Score=27.25 Aligned_cols=41 Identities=17% Similarity=0.142 Sum_probs=32.1
Q ss_pred CCCccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCcc
Q 011848 3 KQDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEH 44 (476)
Q Consensus 3 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (476)
+|+++||+|+..+... ..-+....+.|.+.|++|.++++..
T Consensus 6 ~~~~~~v~il~~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~~ 46 (190)
T 2vrn_A 6 DLTGKKIAILAADGVE-EIELTSPRAAIEAAGGTTELISLEP 46 (190)
T ss_dssp CCTTCEEEEECCTTCB-HHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCCCEEEEEeCCCCC-HHHHHHHHHHHHHCCCEEEEEecCC
Confidence 4566799999887663 4566677888999999999999753
No 207
>1hyq_A MIND, cell division inhibitor (MIND-1); MINC, FTSZ, bacterial cell division, cell cycle; 2.60A {Archaeoglobus fulgidus} SCOP: c.37.1.10
Probab=43.73 E-value=20 Score=31.68 Aligned_cols=38 Identities=18% Similarity=0.265 Sum_probs=30.4
Q ss_pred cEEEEE--cCCCccCHHHHHHHHHHHHhCCCEEEEEeCcc
Q 011848 7 VHVAIL--PLPAVGHVNSMLNLAELLGHAGIKITFLNTEH 44 (476)
Q Consensus 7 ~~il~~--~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (476)
+|++.+ +-|+-|-..-...||..|+++|++|.++-...
T Consensus 2 ~~~I~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (263)
T 1hyq_A 2 VRTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADI 41 (263)
T ss_dssp CEEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CeEEEEECCCCCCCHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 344433 34688999999999999999999999997643
No 208
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=43.47 E-value=25 Score=28.13 Aligned_cols=34 Identities=15% Similarity=0.261 Sum_probs=26.0
Q ss_pred CccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCc
Q 011848 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTE 43 (476)
Q Consensus 5 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 43 (476)
..++|+++-.|..| ..+++.|.++|++|+++...
T Consensus 18 ~~~~v~IiG~G~iG-----~~la~~L~~~g~~V~vid~~ 51 (155)
T 2g1u_A 18 KSKYIVIFGCGRLG-----SLIANLASSSGHSVVVVDKN 51 (155)
T ss_dssp CCCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEESC
T ss_pred CCCcEEEECCCHHH-----HHHHHHHHhCCCeEEEEECC
Confidence 34689988654444 56889999999999999763
No 209
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=43.32 E-value=24 Score=30.98 Aligned_cols=36 Identities=0% Similarity=-0.105 Sum_probs=27.6
Q ss_pred CccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCc
Q 011848 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTE 43 (476)
Q Consensus 5 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 43 (476)
.|.|+++++.++.| --.+|++.|+++|++|.++.-.
T Consensus 20 ~m~k~vlITGas~g---IG~~la~~l~~~G~~V~~~~r~ 55 (251)
T 3orf_A 20 HMSKNILVLGGSGA---LGAEVVKFFKSKSWNTISIDFR 55 (251)
T ss_dssp --CCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred ccCCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 46688888887763 4578999999999999888753
No 210
>3b6i_A Flavoprotein WRBA; flavoproteins, NADH:quinone oxidoreductase, FMN; HET: FMN 15P; 1.66A {Escherichia coli} PDB: 2r96_A* 2r97_A 2rg1_A* 3b6j_A* 3b6k_A* 3b6m_A*
Probab=42.96 E-value=28 Score=28.99 Aligned_cols=39 Identities=21% Similarity=0.317 Sum_probs=28.0
Q ss_pred ccEEEEEcCCCccCHHHHHH-HHHHHHh-CCCEEEEEeCcc
Q 011848 6 HVHVAILPLPAVGHVNSMLN-LAELLGH-AGIKITFLNTEH 44 (476)
Q Consensus 6 ~~~il~~~~~~~GH~~p~l~-La~~L~~-rGH~Vt~~~~~~ 44 (476)
||||+++-....|+..-+.. +++.|.+ .|++|.++.-..
T Consensus 1 Mmkilii~~S~~g~t~~la~~i~~~l~~~~g~~v~~~~l~~ 41 (198)
T 3b6i_A 1 MAKVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPE 41 (198)
T ss_dssp -CEEEEEECCSSSHHHHHHHHHHHHHHTSTTCEEEEEECCC
T ss_pred CCeEEEEEeCCCcHHHHHHHHHHHHHhhcCCCEEEEEEccc
Confidence 56888887777888776544 5667776 899998887543
No 211
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=42.92 E-value=19 Score=32.43 Aligned_cols=32 Identities=19% Similarity=0.239 Sum_probs=26.5
Q ss_pred ccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 6 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
+.||+|+-.|..| ..+|..|+++||+|+++..
T Consensus 4 ~~kV~VIGaG~mG-----~~iA~~la~~G~~V~l~d~ 35 (283)
T 4e12_A 4 ITNVTVLGTGVLG-----SQIAFQTAFHGFAVTAYDI 35 (283)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCEEEEECCCHHH-----HHHHHHHHhCCCeEEEEeC
Confidence 5699999777666 4689999999999999865
No 212
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=42.91 E-value=23 Score=31.94 Aligned_cols=31 Identities=19% Similarity=0.338 Sum_probs=25.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
|||+|+-.|..|. .++..|.+.||+|+++..
T Consensus 6 m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~~ 36 (299)
T 1vpd_A 6 MKVGFIGLGIMGK-----PMSKNLLKAGYSLVVSDR 36 (299)
T ss_dssp CEEEEECCSTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred ceEEEECchHHHH-----HHHHHHHhCCCEEEEEeC
Confidence 5999998888875 468889999999987754
No 213
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=42.57 E-value=21 Score=32.68 Aligned_cols=33 Identities=15% Similarity=0.197 Sum_probs=27.7
Q ss_pred ccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCcc
Q 011848 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEH 44 (476)
Q Consensus 6 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (476)
+|||+++..+ ....+++++.++||+|.++.+..
T Consensus 2 ~m~Ililg~g------~~~~l~~a~~~~G~~v~~~~~~~ 34 (334)
T 2r85_A 2 KVRIATYASH------SALQILKGAKDEGFETIAFGSSK 34 (334)
T ss_dssp CSEEEEESST------THHHHHHHHHHTTCCEEEESCGG
T ss_pred ceEEEEECCh------hHHHHHHHHHhCCCEEEEEECCC
Confidence 3599999887 56789999999999999988754
No 214
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=42.57 E-value=13 Score=33.70 Aligned_cols=32 Identities=13% Similarity=0.174 Sum_probs=27.2
Q ss_pred ccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 6 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
++||.|+-.|..|. .+|+.|+++||+|+++..
T Consensus 15 ~~~I~vIG~G~mG~-----~~A~~l~~~G~~V~~~dr 46 (296)
T 3qha_A 15 QLKLGYIGLGNMGA-----PMATRMTEWPGGVTVYDI 46 (296)
T ss_dssp CCCEEEECCSTTHH-----HHHHHHTTSTTCEEEECS
T ss_pred CCeEEEECcCHHHH-----HHHHHHHHCCCeEEEEeC
Confidence 35999998888874 689999999999998865
No 215
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=42.51 E-value=33 Score=28.84 Aligned_cols=38 Identities=11% Similarity=0.039 Sum_probs=27.9
Q ss_pred CccEEEEEcCCCccCH----HHHHHHHHHHHhCCCEEEEEeCc
Q 011848 5 DHVHVAILPLPAVGHV----NSMLNLAELLGHAGIKITFLNTE 43 (476)
Q Consensus 5 ~~~~il~~~~~~~GH~----~p~l~La~~L~~rGH~Vt~~~~~ 43 (476)
..++|.+++... +.- .-...|++.|+++||.|..-..+
T Consensus 12 ~~~~I~Vfg~s~-~~~~~~~~~A~~lg~~la~~g~~lv~GGG~ 53 (189)
T 3sbx_A 12 GRWTVAVYCAAA-PTHPELLELAGAVGAAIAARGWTLVWGGGH 53 (189)
T ss_dssp -CCEEEEECCSS-CCCHHHHHHHHHHHHHHHHTTCEEEECCBC
T ss_pred CCeEEEEEEeCC-CCChHHHHHHHHHHHHHHHCCCEEEECCCc
Confidence 357999998766 433 34677888999999998777654
No 216
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=42.34 E-value=22 Score=26.48 Aligned_cols=32 Identities=13% Similarity=0.187 Sum_probs=23.8
Q ss_pred ccEEEEEcCCCccCHHHHHHHHHHHHhCC-CEEEEEeC
Q 011848 6 HVHVAILPLPAVGHVNSMLNLAELLGHAG-IKITFLNT 42 (476)
Q Consensus 6 ~~~il~~~~~~~GH~~p~l~La~~L~~rG-H~Vt~~~~ 42 (476)
|++|+++-.|.. -..+++.|.++| |+|+++..
T Consensus 5 ~~~v~I~G~G~i-----G~~~~~~l~~~g~~~v~~~~r 37 (118)
T 3ic5_A 5 RWNICVVGAGKI-----GQMIAALLKTSSNYSVTVADH 37 (118)
T ss_dssp CEEEEEECCSHH-----HHHHHHHHHHCSSEEEEEEES
T ss_pred cCeEEEECCCHH-----HHHHHHHHHhCCCceEEEEeC
Confidence 568888744333 356899999999 99988875
No 217
>3ot1_A 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; csgid, structural genomics; HET: MSE CSX; 1.16A {Vibrio cholerae o1 biovar el tor} SCOP: c.23.16.0
Probab=42.24 E-value=42 Score=28.44 Aligned_cols=37 Identities=11% Similarity=0.126 Sum_probs=30.3
Q ss_pred ccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCc
Q 011848 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTE 43 (476)
Q Consensus 6 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 43 (476)
|.||+|+..++. ...-+....+.|.+.|++|++++..
T Consensus 9 ~~~v~ill~~g~-~~~e~~~~~~~l~~ag~~v~~vs~~ 45 (208)
T 3ot1_A 9 SKRILVPVAHGS-EEMETVIIVDTLVRAGFQVTMAAVG 45 (208)
T ss_dssp CCEEEEEECTTC-CHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCeEEEEECCCC-cHHHHHHHHHHHHHCCCEEEEEEcC
Confidence 459999988876 4566677789999999999999984
No 218
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=42.04 E-value=20 Score=30.56 Aligned_cols=33 Identities=15% Similarity=0.327 Sum_probs=26.1
Q ss_pred CccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 5 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
.++||.|+-.|..| ..+|..|+++||+|+++..
T Consensus 18 ~~~~I~iiG~G~mG-----~~la~~l~~~g~~V~~~~~ 50 (209)
T 2raf_A 18 QGMEITIFGKGNMG-----QAIGHNFEIAGHEVTYYGS 50 (209)
T ss_dssp --CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECT
T ss_pred CCCEEEEECCCHHH-----HHHHHHHHHCCCEEEEEcC
Confidence 36799999877776 5678999999999998864
No 219
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=41.99 E-value=20 Score=31.82 Aligned_cols=33 Identities=12% Similarity=-0.004 Sum_probs=27.0
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCc
Q 011848 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTE 43 (476)
Q Consensus 8 ~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 43 (476)
|+++++.++.| --.++|+.|+++|++|.++.-.
T Consensus 28 k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r~ 60 (260)
T 3gem_A 28 APILITGASQR---VGLHCALRLLEHGHRVIISYRT 60 (260)
T ss_dssp CCEEESSTTSH---HHHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 77888887764 4568999999999999988753
No 220
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=41.99 E-value=21 Score=33.29 Aligned_cols=49 Identities=14% Similarity=0.164 Sum_probs=38.2
Q ss_pred CccEEEEEcC-CCccCHHHHHHHHHHHHhCCCEEEEEeCccchhhHhhccc
Q 011848 5 DHVHVAILPL-PAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSS 54 (476)
Q Consensus 5 ~~~~il~~~~-~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~ 54 (476)
+|.+|+|++. |+-|-..-..+||..|+++|++|.++.... ...+....+
T Consensus 24 ~~~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~-~~~l~~~l~ 73 (349)
T 3ug7_A 24 DGTKYIMFGGKGGVGKTTMSAATGVYLAEKGLKVVIVSTDP-AHSLRDIFE 73 (349)
T ss_dssp CSCEEEEEECSSSTTHHHHHHHHHHHHHHSSCCEEEEECCT-TCHHHHHHC
T ss_pred CCCEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEeCCC-CCCHHHHhC
Confidence 4556766655 788999999999999999999999999865 444444433
No 221
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=41.94 E-value=27 Score=31.98 Aligned_cols=35 Identities=26% Similarity=0.363 Sum_probs=24.8
Q ss_pred CccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCc
Q 011848 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTE 43 (476)
Q Consensus 5 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 43 (476)
.||||++. |+.|.+ -..|++.|.++||+|+.++-.
T Consensus 12 ~~M~ilVt--GatG~i--G~~l~~~L~~~g~~V~~~~r~ 46 (342)
T 2x4g_A 12 AHVKYAVL--GATGLL--GHHAARAIRAAGHDLVLIHRP 46 (342)
T ss_dssp CCCEEEEE--STTSHH--HHHHHHHHHHTTCEEEEEECT
T ss_pred cCCEEEEE--CCCcHH--HHHHHHHHHHCCCEEEEEecC
Confidence 34677665 344433 467889999999999998753
No 222
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=41.82 E-value=19 Score=32.22 Aligned_cols=32 Identities=16% Similarity=0.150 Sum_probs=26.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCc
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTE 43 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 43 (476)
|||+|+-.|..|. .+|..|+++||+|+++...
T Consensus 1 m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~r~ 32 (291)
T 1ks9_A 1 MKITVLGCGALGQ-----LWLTALCKQGHEVQGWLRV 32 (291)
T ss_dssp CEEEEECCSHHHH-----HHHHHHHHTTCEEEEECSS
T ss_pred CeEEEECcCHHHH-----HHHHHHHhCCCCEEEEEcC
Confidence 4899998877774 6889999999999998653
No 223
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=41.80 E-value=64 Score=24.53 Aligned_cols=62 Identities=5% Similarity=-0.054 Sum_probs=35.9
Q ss_pred hCCceeccccccchhhhhHhhhcceeeeEEeccccCHHHHHHHHHHHHhHhHHHHHHHHHHHHHH
Q 011848 380 AGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMVERKEEFMESADRMANL 444 (476)
Q Consensus 380 ~GvP~l~~P~~~DQ~~na~r~~e~~G~g~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~a~~l~~~ 444 (476)
..+|++++-...|.......+ +..|+--.+.+.++.++|..+|++++.. ...+...+++...
T Consensus 71 ~~~~ii~~s~~~~~~~~~~~~-~~~ga~~~l~KP~~~~~L~~~i~~~~~~--~~~~~~~~~~~~~ 132 (139)
T 2jk1_A 71 PETVRIIITGYTDSASMMAAI-NDAGIHQFLTKPWHPEQLLSSARNAARM--FTLARENERLSLE 132 (139)
T ss_dssp TTSEEEEEESCTTCHHHHHHH-HHTTCCEEEESSCCHHHHHHHHHHHHHH--HHHHHHHHHHHHH
T ss_pred CCCcEEEEeCCCChHHHHHHH-HhhchhhhccCCCCHHHHHHHHHHHHHH--HHHHHHHHHHHHH
Confidence 356777664444433333333 2334545566889999999999999874 3333333344333
No 224
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=41.74 E-value=28 Score=31.31 Aligned_cols=31 Identities=23% Similarity=0.121 Sum_probs=26.2
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEe
Q 011848 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLN 41 (476)
Q Consensus 8 ~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~ 41 (476)
|+++++.++.| --.++++.|+++|++|+++.
T Consensus 10 k~~lVTGas~G---IG~aia~~la~~G~~V~~~~ 40 (291)
T 1e7w_A 10 PVALVTGAAKR---LGRSIAEGLHAEGYAVCLHY 40 (291)
T ss_dssp CEEEETTCSSH---HHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCch---HHHHHHHHHHHCCCeEEEEc
Confidence 78888887764 45789999999999999887
No 225
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=41.68 E-value=33 Score=31.51 Aligned_cols=33 Identities=12% Similarity=0.077 Sum_probs=24.2
Q ss_pred CccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 5 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
++|||+|+-.|.. .....++|.++||+|..+.+
T Consensus 6 ~~mrivf~Gt~~f-----a~~~L~~L~~~~~~v~~Vvt 38 (318)
T 3q0i_A 6 QSLRIVFAGTPDF-----AARHLAALLSSEHEIIAVYT 38 (318)
T ss_dssp -CCEEEEECCSHH-----HHHHHHHHHTSSSEEEEEEC
T ss_pred cCCEEEEEecCHH-----HHHHHHHHHHCCCcEEEEEc
Confidence 4679999987643 34556888889999876655
No 226
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=41.68 E-value=28 Score=30.59 Aligned_cols=35 Identities=20% Similarity=0.158 Sum_probs=27.6
Q ss_pred CccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 5 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
.++|.++++.++.| --.+++++|+++|++|.++..
T Consensus 5 ~~~k~vlVTGas~g---IG~~~a~~l~~~G~~v~~~~~ 39 (264)
T 3i4f_A 5 RFVRHALITAGTKG---LGKQVTEKLLAKGYSVTVTYH 39 (264)
T ss_dssp -CCCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred cccCEEEEeCCCch---hHHHHHHHHHHCCCEEEEEcC
Confidence 35688888887763 346899999999999998864
No 227
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=41.53 E-value=18 Score=33.53 Aligned_cols=32 Identities=16% Similarity=0.259 Sum_probs=27.8
Q ss_pred ccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 6 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
.+||.|+-.|..| ..+|..|++.||+|++...
T Consensus 14 ~~kI~iIG~G~mG-----~ala~~L~~~G~~V~~~~r 45 (335)
T 1z82_A 14 EMRFFVLGAGSWG-----TVFAQMLHENGEEVILWAR 45 (335)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCcEEEECcCHHH-----HHHHHHHHhCCCeEEEEeC
Confidence 4699999988887 5789999999999999875
No 228
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=41.32 E-value=26 Score=30.57 Aligned_cols=34 Identities=18% Similarity=0.091 Sum_probs=26.6
Q ss_pred ccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 6 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
|.|+++++.++.| --.++++.|+++|++|.++..
T Consensus 1 m~k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r 34 (247)
T 3dii_A 1 MNRGVIVTGGGHG---IGKQICLDFLEAGDKVCFIDI 34 (247)
T ss_dssp -CCEEEEESTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 3477888887764 457899999999999998865
No 229
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=41.28 E-value=31 Score=30.51 Aligned_cols=39 Identities=31% Similarity=0.310 Sum_probs=28.7
Q ss_pred CCCCCc-cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 1 MEKQDH-VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 1 m~~~~~-~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
|..+++ .|+++++.++.| --.++++.|+++|++|.++.-
T Consensus 1 M~~~~l~~k~~lVTGas~G---IG~aia~~l~~~G~~V~~~~r 40 (265)
T 3lf2_A 1 MKPYDLSEAVAVVTGGSSG---IGLATVELLLEAGAAVAFCAR 40 (265)
T ss_dssp --CCCCTTCEEEEETCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCccCcCCCEEEEeCCCCh---HHHHHHHHHHHCCCEEEEEeC
Confidence 444432 388888888764 457899999999999988864
No 230
>1u9c_A APC35852; structural genomics, protein structure initiative, MCSG, PAR disease, chaperone, cysteine protease, PSI; 1.35A {Geobacillus stearothermophilus} SCOP: c.23.16.2
Probab=41.22 E-value=48 Score=28.39 Aligned_cols=38 Identities=5% Similarity=-0.004 Sum_probs=28.6
Q ss_pred cEEEEEcCC---------CccCHHHHHHHHHHHHhCCCEEEEEeCcc
Q 011848 7 VHVAILPLP---------AVGHVNSMLNLAELLGHAGIKITFLNTEH 44 (476)
Q Consensus 7 ~~il~~~~~---------~~GH~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (476)
.||+|+... ..-...=+....+.|.+.|++|+++++..
T Consensus 6 ~kv~ill~~~~~~~~~~~~G~~~~e~~~p~~~l~~ag~~v~~vs~~~ 52 (224)
T 1u9c_A 6 KRVLMVVTNHTTITDDHKTGLWLEEFAVPYLVFQEKGYDVKVASIQG 52 (224)
T ss_dssp CEEEEEECCCCEEETTEECCBCHHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred ceEEEEECCcccccCCCCCceeHHHHHHHHHHHHHCCCeEEEECCCC
Confidence 489888872 22245667778888999999999999754
No 231
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=40.92 E-value=30 Score=29.18 Aligned_cols=33 Identities=18% Similarity=0.267 Sum_probs=23.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCc
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTE 43 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 43 (476)
|||++. |+.|.+ -..|+++|+++||+|+.++-.
T Consensus 1 MkvlVt--GatG~i--G~~l~~~L~~~g~~V~~~~R~ 33 (221)
T 3ew7_A 1 MKIGII--GATGRA--GSRILEEAKNRGHEVTAIVRN 33 (221)
T ss_dssp CEEEEE--TTTSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CeEEEE--cCCchh--HHHHHHHHHhCCCEEEEEEcC
Confidence 466554 333433 468899999999999998864
No 232
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=40.59 E-value=20 Score=33.94 Aligned_cols=38 Identities=32% Similarity=0.485 Sum_probs=28.4
Q ss_pred CCCCCccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCc
Q 011848 1 MEKQDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTE 43 (476)
Q Consensus 1 m~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 43 (476)
|..|...+|+|+-.|-.| +.+|..|+++|++|+++-..
T Consensus 21 M~~~~~~dV~IVGaG~aG-----l~~A~~L~~~G~~v~v~E~~ 58 (398)
T 2xdo_A 21 MNLLSDKNVAIIGGGPVG-----LTMAKLLQQNGIDVSVYERD 58 (398)
T ss_dssp --CCTTCEEEEECCSHHH-----HHHHHHHHTTTCEEEEEECS
T ss_pred ccccCCCCEEEECCCHHH-----HHHHHHHHHCCCCEEEEeCC
Confidence 344445689998877554 78899999999999999753
No 233
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=40.55 E-value=23 Score=28.63 Aligned_cols=37 Identities=11% Similarity=0.084 Sum_probs=30.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCccch
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYY 46 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~ 46 (476)
.+++++..|+. +-|++.+++.|.++|.+|+++ .....
T Consensus 24 ~~~llIaGG~G--ItPl~sm~~~l~~~~~~v~l~-g~r~~ 60 (158)
T 3lrx_A 24 GKILAIGAYTG--IVEVYPIAKAWQEIGNDVTTL-HVTFE 60 (158)
T ss_dssp SEEEEEEETTH--HHHHHHHHHHHHHHTCEEEEE-EECBG
T ss_pred CeEEEEEccCc--HHHHHHHHHHHHhcCCcEEEE-EeCCH
Confidence 37888887764 899999999999999999999 54433
No 234
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=40.34 E-value=33 Score=30.44 Aligned_cols=33 Identities=21% Similarity=0.168 Sum_probs=27.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
.|+++++.++.| --.++|+.|+++|++|.+...
T Consensus 28 ~k~vlVTGas~g---IG~aia~~la~~G~~V~~~~~ 60 (269)
T 4dmm_A 28 DRIALVTGASRG---IGRAIALELAAAGAKVAVNYA 60 (269)
T ss_dssp TCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 388899888764 356899999999999988765
No 235
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=40.19 E-value=33 Score=30.57 Aligned_cols=32 Identities=25% Similarity=0.216 Sum_probs=26.8
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 8 ~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
|+++++.++.| --.++|+.|+++|++|.++..
T Consensus 11 k~~lVTGas~g---IG~a~a~~l~~~G~~V~~~~r 42 (281)
T 3s55_A 11 KTALITGGARG---MGRSHAVALAEAGADIAICDR 42 (281)
T ss_dssp CEEEEETTTSH---HHHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEeCCCch---HHHHHHHHHHHCCCeEEEEeC
Confidence 78888888765 457899999999999988875
No 236
>1t1j_A Hypothetical protein; structural genomics, PSI, protein structure initiative, MIDW center for structural genomics, MCSG; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.14.2
Probab=40.04 E-value=43 Score=25.96 Aligned_cols=34 Identities=18% Similarity=0.156 Sum_probs=23.9
Q ss_pred CccEEEEEcCCCccCHH--------HHHHHHHHHHhCCCEEE
Q 011848 5 DHVHVAILPLPAVGHVN--------SMLNLAELLGHAGIKIT 38 (476)
Q Consensus 5 ~~~~il~~~~~~~GH~~--------p~l~La~~L~~rGH~Vt 38 (476)
-+||.+++++|=.|... -+-..|..|.++||.+.
T Consensus 6 ~~M~~IYIagPysg~~~n~~~~n~~~~~r~A~~l~~~G~ip~ 47 (125)
T 1t1j_A 6 GHMRKIFLACPYSHADAEVVEQRFRACNEVAATIVRAGHVVF 47 (125)
T ss_dssp -CCCEEEEECCCCCSSHHHHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred hhhhheeEECCCCCCcchHHHHHHHHHHHHHHHHHHCCCeee
Confidence 46788899999878732 34455677889999654
No 237
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=39.90 E-value=93 Score=30.16 Aligned_cols=34 Identities=21% Similarity=0.388 Sum_probs=27.7
Q ss_pred HHHHHHHcCCCCceEEEecCCcccHHHHHHHhCCceEEE
Q 011848 100 LLKEMVSDSKSPVNCIITDGYMSRAIDAAREVGVSIIYF 138 (476)
Q Consensus 100 ~~~~ll~~~~~~~D~Ii~D~~~~~~~~~A~~lgiP~v~~ 138 (476)
.+.+++++. +||++|.+.. ...+|+++|||++.+
T Consensus 376 ~l~~~i~~~--~pDl~ig~~~---~~~~a~k~gip~~~~ 409 (458)
T 1mio_B 376 DVHQWIKNE--GVDLLISNTY---GKFIAREENIPFVRF 409 (458)
T ss_dssp HHHHHHHHS--CCSEEEESGG---GHHHHHHHTCCEEEC
T ss_pred HHHHHHHhc--CCCEEEeCcc---hHHHHHHcCCCEEEe
Confidence 356677776 9999998854 578899999999986
No 238
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*
Probab=39.89 E-value=19 Score=33.39 Aligned_cols=38 Identities=16% Similarity=0.214 Sum_probs=28.5
Q ss_pred CccEEEEEcCCCccCHH----HHHHHHHHHHhCCCEEEEEeC
Q 011848 5 DHVHVAILPLPAVGHVN----SMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 5 ~~~~il~~~~~~~GH~~----p~l~La~~L~~rGH~Vt~~~~ 42 (476)
+++||+++..|..+--. ....++++|.+.||+|..+..
T Consensus 2 ~~~~v~vl~gG~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~ 43 (343)
T 1e4e_A 2 NRIKVAILFGGCSEEHDVSVKSAIEIAANINKEKYEPLYIGI 43 (343)
T ss_dssp CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEE
T ss_pred CCcEEEEEeCCCCCCcchhHHHHHHHHHHhhhcCCEEEEEEE
Confidence 46799999866443333 567789999999999998875
No 239
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=39.87 E-value=28 Score=32.02 Aligned_cols=38 Identities=16% Similarity=0.171 Sum_probs=32.5
Q ss_pred cEEEEEcC-CCccCHHHHHHHHHHHHhCCCEEEEEeCcc
Q 011848 7 VHVAILPL-PAVGHVNSMLNLAELLGHAGIKITFLNTEH 44 (476)
Q Consensus 7 ~~il~~~~-~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (476)
.+|+|+.. |+-|-..-..+||..|+++|++|.++....
T Consensus 14 ~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~ 52 (324)
T 3zq6_A 14 TTFVFIGGKGGVGKTTISAATALWMARSGKKTLVISTDP 52 (324)
T ss_dssp CEEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEECCS
T ss_pred eEEEEEeCCCCchHHHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 46655554 788999999999999999999999999865
No 240
>2afh_E Nitrogenase iron protein 1; nitrogen fixation, iron-sulfur, metal-binding, molybdenum, oxidoreductase; HET: HCA CFN CLF PGE PG4 P6G 1PE; 2.10A {Azotobacter vinelandii} SCOP: c.37.1.10 PDB: 1g1m_A 1g5p_A 1m1y_E* 1m34_E* 1n2c_E* 1nip_A* 1fp6_A* 2afi_E* 2afk_E* 2nip_A 1de0_A 1xcp_A* 1xdb_A 1xd8_A 1xd9_A* 1g20_E* 1g21_E* 2c8v_A* 1rw4_A
Probab=39.76 E-value=30 Score=31.01 Aligned_cols=38 Identities=21% Similarity=0.309 Sum_probs=32.4
Q ss_pred ccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCc
Q 011848 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTE 43 (476)
Q Consensus 6 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 43 (476)
|..|+|..-|+-|-..-...||..|+++|++|.++-..
T Consensus 2 MkvIavs~KGGvGKTT~a~nLA~~La~~G~rVlliD~D 39 (289)
T 2afh_E 2 MRQCAIYGKGGIGKSTTTQNLVAALAEMGKKVMIVGCD 39 (289)
T ss_dssp CEEEEEEECTTSSHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred ceEEEEeCCCcCcHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 44677766789999999999999999999999998653
No 241
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=39.65 E-value=30 Score=29.76 Aligned_cols=33 Identities=18% Similarity=0.228 Sum_probs=26.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
+|+++++.++.| --.++++.|+++|++|.+..-
T Consensus 2 ~k~vlITGas~g---IG~~ia~~l~~~G~~V~~~~r 34 (235)
T 3l77_A 2 MKVAVITGASRG---IGEAIARALARDGYALALGAR 34 (235)
T ss_dssp CCEEEEESCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 477788877654 456899999999999988875
No 242
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=39.61 E-value=1.9e+02 Score=26.45 Aligned_cols=124 Identities=13% Similarity=0.113 Sum_probs=63.8
Q ss_pred ceEEEEecccccCCHHHHHHHHHHHhhC-CCcEEEEEcCCCCCCCCCCCCCchHHHHHhcCCceeeeccCHHHHhCcCCC
Q 011848 284 SVIYVSFGSIAVMSRDQLIEFYYGLVHS-KKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAV 362 (476)
Q Consensus 284 ~~V~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~vp~~~ll~~~~~ 362 (476)
.+.+|.+|.+. ..++.++.+. +..++.++.. .++...+ .....-..-+-...+++...++
T Consensus 6 rvgiiG~G~~g-------~~~~~~l~~~~~~~l~av~d~-----------~~~~~~~-~a~~~g~~~~~~~~~~l~~~~~ 66 (344)
T 3euw_A 6 RIALFGAGRIG-------HVHAANIAANPDLELVVIADP-----------FIEGAQR-LAEANGAEAVASPDEVFARDDI 66 (344)
T ss_dssp EEEEECCSHHH-------HHHHHHHHHCTTEEEEEEECS-----------SHHHHHH-HHHTTTCEEESSHHHHTTCSCC
T ss_pred EEEEECCcHHH-------HHHHHHHHhCCCcEEEEEECC-----------CHHHHHH-HHHHcCCceeCCHHHHhcCCCC
Confidence 46678888765 2345555554 4565655532 1121111 1111112334567788885554
Q ss_pred CccccccChh----HHHHHHHhCCceec-cccc--cchhhhhHhhhcceeeeEEec--cccCHHHHHHHHHHHHh
Q 011848 363 GGFLTHCGWN----STLESIVAGMPMIC-WPSF--ADQQINSRFVGEVWKLGLDIK--DLCDRNIVEKAVNDLMV 428 (476)
Q Consensus 363 ~~~I~HgG~g----s~~eal~~GvP~l~-~P~~--~DQ~~na~r~~e~~G~g~~~~--~~~~~~~l~~ai~~~l~ 428 (476)
.+++----.. -+.+|+.+|+++++ -|+. .++-.-...++++.|+-+.+. .++.+ ....+++++.
T Consensus 67 D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p--~~~~~k~~i~ 139 (344)
T 3euw_A 67 DGIVIGSPTSTHVDLITRAVERGIPALCEKPIDLDIEMVRACKEKIGDGASKVMLGFNRRFDP--SFAAINARVA 139 (344)
T ss_dssp CEEEECSCGGGHHHHHHHHHHTTCCEEECSCSCSCHHHHHHHHHHHGGGGGGEEECCGGGGCH--HHHHHHHHHH
T ss_pred CEEEEeCCchhhHHHHHHHHHcCCcEEEECCCCCCHHHHHHHHHHHHhcCCeEEecchhhcCH--HHHHHHHHHh
Confidence 4466433333 46788999999876 3544 344333333335667666665 24433 2234445443
No 243
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=39.50 E-value=17 Score=34.22 Aligned_cols=33 Identities=12% Similarity=0.330 Sum_probs=26.8
Q ss_pred CccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 5 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
++|||.|+-.|..| ..+|..|+++||+|+++..
T Consensus 21 ~~mkIgiIGlG~mG-----~~~A~~L~~~G~~V~v~dr 53 (358)
T 4e21_A 21 QSMQIGMIGLGRMG-----ADMVRRLRKGGHECVVYDL 53 (358)
T ss_dssp -CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred cCCEEEEECchHHH-----HHHHHHHHhCCCEEEEEeC
Confidence 34799999877666 4789999999999998865
No 244
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=39.47 E-value=28 Score=30.68 Aligned_cols=35 Identities=17% Similarity=0.114 Sum_probs=28.6
Q ss_pred ccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCc
Q 011848 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTE 43 (476)
Q Consensus 6 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 43 (476)
|-|.+++|.++.| =-.++|+.|++.|.+|.+....
T Consensus 1 MnK~vlVTGas~G---IG~aia~~la~~Ga~V~~~~~~ 35 (247)
T 3ged_A 1 MNRGVIVTGGGHG---IGKQICLDFLEAGDKVCFIDID 35 (247)
T ss_dssp -CCEEEEESTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEecCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 4488899999886 4578999999999999988753
No 245
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=39.37 E-value=34 Score=30.54 Aligned_cols=33 Identities=21% Similarity=0.210 Sum_probs=27.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
.|+++++.++.| --.++|+.|+++|++|.++..
T Consensus 27 ~k~vlVTGas~G---IG~aia~~l~~~G~~V~~~~r 59 (277)
T 4dqx_A 27 QRVCIVTGGGSG---IGRATAELFAKNGAYVVVADV 59 (277)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 388888888764 456899999999999998875
No 246
>3pnx_A Putative sulfurtransferase DSRE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE GOL; 1.92A {Syntrophomonas wolfei}
Probab=39.30 E-value=52 Score=26.72 Aligned_cols=43 Identities=12% Similarity=-0.062 Sum_probs=33.9
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCccchhhHhh
Q 011848 9 VAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIR 51 (476)
Q Consensus 9 il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~ 51 (476)
.+++..+..--+++.+.||..-+..|++|+++.+-.....+.+
T Consensus 8 ~II~~sG~~dka~~a~ilA~~AaA~G~eV~iFfTf~Gl~~l~K 50 (160)
T 3pnx_A 8 NLLLFSGDYDKALASLIIANAAREMEIEVTIFCAFWGLLLLRD 50 (160)
T ss_dssp EEEECCCCHHHHHHHHHHHHHHHHTTCEEEEEECGGGGGGGBC
T ss_pred EEEEecCCHHHHHHHHHHHHHHHHcCCCEEEEEeehhHHHhcc
Confidence 4566667888899999999999999999999987554444433
No 247
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=39.19 E-value=33 Score=31.11 Aligned_cols=38 Identities=13% Similarity=0.200 Sum_probs=32.1
Q ss_pred ccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCc
Q 011848 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTE 43 (476)
Q Consensus 6 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 43 (476)
|..|+|..-|+-|=..-...||..|+++|++|.++-..
T Consensus 41 ~~vI~v~~KGGvGKTT~a~nLA~~La~~G~~VlliD~D 78 (307)
T 3end_A 41 AKVFAVYGKGGIGKSTTSSNLSAAFSILGKRVLQIGCD 78 (307)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEES
T ss_pred ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 44566666678899999999999999999999999764
No 248
>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 3n8d_A* 2i80_A*
Probab=39.09 E-value=15 Score=34.45 Aligned_cols=39 Identities=5% Similarity=0.030 Sum_probs=28.2
Q ss_pred CCccEEEEEcCCCccCH----HHHHHHHHHHHhCCCEEEEEeC
Q 011848 4 QDHVHVAILPLPAVGHV----NSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 4 ~~~~~il~~~~~~~GH~----~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
|+++||+++..+....- .....++++|.++||+|..+..
T Consensus 1 m~~~~v~vl~gg~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~ 43 (364)
T 2i87_A 1 MTKENICIVFGGKSAEHEVSILTAQNVLNAIDKDKYHVDIIYI 43 (364)
T ss_dssp --CEEEEEEEECSSSCHHHHHHHHHHHHHTSCTTTEEEEEEEE
T ss_pred CCCcEEEEEECCCCccchhHHHHHHHHHHHHhhcCCEEEEEEE
Confidence 34679999987644433 3457788999999999998874
No 249
>2vpq_A Acetyl-COA carboxylase; bacteria, ATP-grAsp domain, biotin carboxylase, ligase; HET: ANP; 2.1A {Staphylococcus aureus}
Probab=39.05 E-value=60 Score=31.24 Aligned_cols=32 Identities=16% Similarity=0.141 Sum_probs=24.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCc
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTE 43 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 43 (476)
.||+++-.+ ...+.+++++.+.|++|+++.+.
T Consensus 2 k~ilI~g~g-----~~~~~i~~a~~~~G~~vv~v~~~ 33 (451)
T 2vpq_A 2 KKVLIANRG-----EIAVRIIRACRDLGIQTVAIYSE 33 (451)
T ss_dssp CEEEECCCH-----HHHHHHHHHHHHTTCEEEEEEEG
T ss_pred ceEEEeCCC-----HHHHHHHHHHHHcCCEEEEEecc
Confidence 478876533 35678899999999999988753
No 250
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=39.03 E-value=36 Score=29.48 Aligned_cols=38 Identities=24% Similarity=0.229 Sum_probs=29.5
Q ss_pred CCccEEEEEcC-CCccCHHHHHHHHHHHHhCCCEEEEEe
Q 011848 4 QDHVHVAILPL-PAVGHVNSMLNLAELLGHAGIKITFLN 41 (476)
Q Consensus 4 ~~~~~il~~~~-~~~GH~~p~l~La~~L~~rGH~Vt~~~ 41 (476)
++|..|++... +.-|-..-...|++.|+++|++|.++-
T Consensus 2 ~~mk~i~Itgt~t~vGKT~vt~~L~~~l~~~G~~V~~~K 40 (228)
T 3of5_A 2 NAMKKFFIIGTDTEVGKTYISTKLIEVCEHQNIKSLCLK 40 (228)
T ss_dssp TTCEEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCCcEEEEEeCCCCCCHHHHHHHHHHHHHHCCCeeEEec
Confidence 34434444444 467999999999999999999999985
No 251
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=39.01 E-value=22 Score=30.61 Aligned_cols=99 Identities=9% Similarity=-0.038 Sum_probs=55.7
Q ss_pred cchhhhhhhcCCCCceEEEEecccccCCHHHHHHHHHHHhhCCCcEEEEEcCCCCCCCCCCCCCchHHHHHhcC----Cc
Q 011848 270 DRSCMAWLDKQPKQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKE----RG 345 (476)
Q Consensus 270 ~~~l~~~l~~~~~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~----nv 345 (476)
-.++.++|.+ ++..+|+.|... ....+..++....+-+++=++... ..+. ..+. ++
T Consensus 30 A~~lg~~LA~---~g~~lV~GGg~~----GlM~aa~~gA~~~GG~~iGv~p~~---------l~~~----e~~~~~~~~~ 89 (216)
T 1ydh_A 30 AIELGNELVK---RKIDLVYGGGSV----GLMGLISRRVYEGGLHVLGIIPKA---------LMPI----EISGETVGDV 89 (216)
T ss_dssp HHHHHHHHHH---TTCEEEECCCSS----HHHHHHHHHHHHTTCCEEEEEEGG---------GHHH----HCCSSCCSEE
T ss_pred HHHHHHHHHH---CCCEEEECCCcc----cHhHHHHHHHHHcCCcEEEEechh---------cCcc----ccccCCCCcc
Confidence 3456677774 455667766541 244555566656665555444210 0000 0111 23
Q ss_pred eeeeccCHHH--HhCcCCCCccccccChhHHHHHH---------HhCCceecccc
Q 011848 346 CIAGWVPQEE--VLAHSAVGGFLTHCGWNSTLESI---------VAGMPMICWPS 389 (476)
Q Consensus 346 ~~~~~vp~~~--ll~~~~~~~~I~HgG~gs~~eal---------~~GvP~l~~P~ 389 (476)
.+++.++.+. +...++. .++--||.||+-|.. .+++|++++-.
T Consensus 90 ~~~~~~~~Rk~~~~~~sda-~I~lpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 143 (216)
T 1ydh_A 90 RVVADMHERKAAMAQEAEA-FIALPGGYGTMEELLEMITWSQLGIHKKTVGLLNV 143 (216)
T ss_dssp EEESSHHHHHHHHHHHCSE-EEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEECG
T ss_pred cccCCHHHHHHHHHHhCCE-EEEeCCCccHHHHHHHHHHHHHhcccCCCEEEecC
Confidence 4455555433 4445554 678899999988876 47999998863
No 252
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=38.75 E-value=1.6e+02 Score=24.03 Aligned_cols=143 Identities=12% Similarity=0.161 Sum_probs=77.5
Q ss_pred CCceEEEEecccccCCHHHHHHHHHHHhhCCCcEEEEEcCCCCCCCCCCCCCchHHHHHhcCCceeeeccCHHHHhCcCC
Q 011848 282 KQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSA 361 (476)
Q Consensus 282 ~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~vp~~~ll~~~~ 361 (476)
-+|.|-|-+||.. +-...++....++..+..+-..+- +...+|+.+.+-. .+.+ -...+
T Consensus 10 ~~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~--------SaHR~p~~l~~~~----------~~a~-~~g~~ 68 (170)
T 1xmp_A 10 MKSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVV--------SAHRTPDYMFEYA----------ETAR-ERGLK 68 (170)
T ss_dssp -CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEEC--------CTTTSHHHHHHHH----------HHTT-TTTCC
T ss_pred CCCcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEE--------eccCCHHHHHHHH----------HHHH-hCCCc
Confidence 3677888888885 566678888888888887655552 2224555443211 0000 00123
Q ss_pred CCccccccChh----HHHHHHHhCCceeccccccc--hhhhhHh-hhcc--eeeeEE---ec--cccCHHHHHHHHHHHH
Q 011848 362 VGGFLTHCGWN----STLESIVAGMPMICWPSFAD--QQINSRF-VGEV--WKLGLD---IK--DLCDRNIVEKAVNDLM 427 (476)
Q Consensus 362 ~~~~I~HgG~g----s~~eal~~GvP~l~~P~~~D--Q~~na~r-~~e~--~G~g~~---~~--~~~~~~~l~~ai~~~l 427 (476)
+ +|.=+|.- ++.-+ ..-.|++.+|.... .-..+.. +. + .|+.+. ++ .-.++.-++..|.. +
T Consensus 69 V--iIa~AG~aa~LpgvvA~-~t~~PVIgVP~~~~~l~G~daLlSiv-qmP~GvpVatV~I~~a~~~nAallAaqIla-~ 143 (170)
T 1xmp_A 69 V--IIAGAGGAAHLPGMVAA-KTNLPVIGVPVQSKALNGLDSLLSIV-QMPGGVPVATVAIGKAGSTNAGLLAAQILG-S 143 (170)
T ss_dssp E--EEEEEESSCCHHHHHHT-TCCSCEEEEEECCTTTTTHHHHHHHH-CCCTTCCCEECCSSHHHHHHHHHHHHHHHH-T
T ss_pred E--EEEECCchhhhHHHHHh-ccCCCEEEeeCCCCCCCcHHHHHHHh-cCCCCCeeEEEecCCcchHHHHHHHHHHHc-c
Confidence 3 66555433 22222 23678888887532 1111111 11 2 355321 22 23556666655543 3
Q ss_pred hHhHHHHHHHHHHHHHHHHHHHhcC
Q 011848 428 VERKEEFMESADRMANLAKKSVNKG 452 (476)
Q Consensus 428 ~~~~~~~~~~a~~l~~~~~~~~~~~ 452 (476)
.| +.++++.+.++++.++.+.+.
T Consensus 144 ~d--~~l~~kl~~~r~~~~~~v~~~ 166 (170)
T 1xmp_A 144 FH--DDIHDALELRREAIEKDVREG 166 (170)
T ss_dssp TC--HHHHHHHHHHHHHHHHHHHC-
T ss_pred CC--HHHHHHHHHHHHHHHHHHHhc
Confidence 46 889999999999888765443
No 253
>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*
Probab=38.66 E-value=38 Score=30.85 Aligned_cols=39 Identities=18% Similarity=0.066 Sum_probs=26.8
Q ss_pred CCCCCc-cEEEEEcCCC-ccCHHHHHHHHHHHHhCCCEEEEEe
Q 011848 1 MEKQDH-VHVAILPLPA-VGHVNSMLNLAELLGHAGIKITFLN 41 (476)
Q Consensus 1 m~~~~~-~~il~~~~~~-~GH~~p~l~La~~L~~rGH~Vt~~~ 41 (476)
|.+|++ .|+++++.++ .|-+ -.++|+.|+++|++|.++.
T Consensus 2 M~~~~l~gk~~lVTGa~~s~GI--G~aia~~la~~G~~Vv~~~ 42 (315)
T 2o2s_A 2 AFPIDLRGQTAFVAGVADSHGY--GWAIAKHLASAGARVALGT 42 (315)
T ss_dssp --CCCCTTCEEEEECCSSSSSH--HHHHHHHHHTTTCEEEEEE
T ss_pred CCcccCCCCEEEEeCCCCCCCh--HHHHHHHHHHCCCEEEEEe
Confidence 444432 3788888872 3333 5689999999999999876
No 254
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=38.31 E-value=38 Score=29.69 Aligned_cols=39 Identities=13% Similarity=0.091 Sum_probs=27.4
Q ss_pred CCCCCccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCc
Q 011848 1 MEKQDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTE 43 (476)
Q Consensus 1 m~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 43 (476)
|.+++. |+++++.++.| --.++++.|+++|++|.++...
T Consensus 1 M~~l~~-k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r~ 39 (256)
T 2d1y_A 1 MGLFAG-KGVLVTGGARG---IGRAIAQAFAREGALVALCDLR 39 (256)
T ss_dssp -CTTTT-CEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCCCC-CEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 555543 66677766543 3567899999999999988753
No 255
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=38.15 E-value=57 Score=25.17 Aligned_cols=37 Identities=11% Similarity=0.020 Sum_probs=27.3
Q ss_pred EE-EEEcCCCcc--CHHHHHHHHHHHHhCCCEE-EEEeCcc
Q 011848 8 HV-AILPLPAVG--HVNSMLNLAELLGHAGIKI-TFLNTEH 44 (476)
Q Consensus 8 ~i-l~~~~~~~G--H~~p~l~La~~L~~rGH~V-t~~~~~~ 44 (476)
|+ ++++.+-+| .....+.+|.++.+.||+| .++-..+
T Consensus 2 k~~iiv~~~p~~~~~~~~al~~a~a~~~~g~~v~~vff~~d 42 (130)
T 2hy5_A 2 KFALQINEGPYQHQASDSAYQFAKAALEKGHEIFRVFFYHD 42 (130)
T ss_dssp EEEEEECSCTTTSTHHHHHHHHHHHHHHTTCEEEEEEECGG
T ss_pred EEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCeeCEEEEech
Confidence 44 344445554 4567899999999999999 8888755
No 256
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=38.06 E-value=44 Score=29.02 Aligned_cols=38 Identities=26% Similarity=0.251 Sum_probs=27.9
Q ss_pred CCCCCccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 1 MEKQDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 1 m~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
|.+++. |+++++.++.| --.++++.|+++|++|+++.-
T Consensus 1 m~~l~~-k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r 38 (246)
T 2ag5_A 1 MGRLDG-KVIILTAAAQG---IGQAAALAFAREGAKVIATDI 38 (246)
T ss_dssp CCTTTT-CEEEESSTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCC-CEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEEC
Confidence 555533 67777776653 356889999999999998864
No 257
>2hy5_B Intracellular sulfur oxidation protein DSRF; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_B
Probab=38.05 E-value=53 Score=25.76 Aligned_cols=40 Identities=10% Similarity=0.032 Sum_probs=28.3
Q ss_pred ccEEEEE-cCCCccCHH--HHHHHHHHHHhCCCEEEEEeCccc
Q 011848 6 HVHVAIL-PLPAVGHVN--SMLNLAELLGHAGIKITFLNTEHY 45 (476)
Q Consensus 6 ~~~il~~-~~~~~GH~~--p~l~La~~L~~rGH~Vt~~~~~~~ 45 (476)
|.|++|+ +.+-+|+.. -.+.+|.++...||+|.++-..+.
T Consensus 5 Mkk~~ivv~~~P~g~~~~~~al~~a~a~~a~~~~v~Vff~~DG 47 (136)
T 2hy5_B 5 VKKFMYLNRKAPYGTIYAWEALEVVLIGAAFDQDVCVLFLDDG 47 (136)
T ss_dssp CCEEEEEECSCTTTSSHHHHHHHHHHHHGGGCCEEEEEECGGG
T ss_pred hhEEEEEEeCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEEhHH
Confidence 4356544 445567644 457779999999999999987653
No 258
>3r8n_B 30S ribosomal protein S2; protein biosynthesis, RNA, tRNA, transfer RNA, 16S ribosomal subunit, RRF; 3.00A {Escherichia coli} PDB: 2ykr_B 3fih_B* 3j18_B* 2wwl_B 3oar_B 3oaq_B 3ofb_B 3ofa_B 3ofp_B 3ofx_B 3ofy_B 3ofo_B 3r8o_B 4a2i_B 4gd1_B 4gd2_B 3i1m_B 1vs7_B* 3e1a_B 3e1c_B ...
Probab=38.00 E-value=30 Score=29.82 Aligned_cols=32 Identities=16% Similarity=0.250 Sum_probs=24.4
Q ss_pred CCceEEE-ecCCcc-cHHHHHHHhCCceEEEecc
Q 011848 110 SPVNCII-TDGYMS-RAIDAAREVGVSIIYFRTI 141 (476)
Q Consensus 110 ~~~D~Ii-~D~~~~-~~~~~A~~lgiP~v~~~~~ 141 (476)
..||+|| .|+..- .+..=|.++|||+|.++-+
T Consensus 148 ~~Pdllvv~Dp~~e~~ai~Ea~~l~IP~IalvDT 181 (218)
T 3r8n_B 148 GLPDALFVIDADHEHIAIKEANNLGIPVFAIVDT 181 (218)
T ss_dssp SCCCSCEEEETGGGHHHHHHHHHHTCCCEEECCS
T ss_pred cCCCeEEecCcccccHHHHHHHHhCCCEEEEEeC
Confidence 4788865 777544 5677799999999998765
No 259
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=37.98 E-value=18 Score=33.11 Aligned_cols=33 Identities=24% Similarity=0.391 Sum_probs=27.0
Q ss_pred CccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 5 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
.++||.|+-.|..|. .+|+.|+++||+|++...
T Consensus 8 ~~~~IgiIG~G~mG~-----~~A~~l~~~G~~V~~~dr 40 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGT-----IMAQVLLKQGKRVAIWNR 40 (306)
T ss_dssp CSCSEEEECCSHHHH-----HHHHHHHHTTCCEEEECS
T ss_pred CCCeEEEECCCHHHH-----HHHHHHHHCCCEEEEEeC
Confidence 357999998777764 689999999999998754
No 260
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=37.92 E-value=39 Score=30.06 Aligned_cols=32 Identities=22% Similarity=0.230 Sum_probs=26.7
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 8 ~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
|+++++.++.| --.++|+.|+++|++|.++..
T Consensus 11 k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~~ 42 (287)
T 3pxx_A 11 KVVLVTGGARG---QGRSHAVKLAEEGADIILFDI 42 (287)
T ss_dssp CEEEEETTTSH---HHHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEeCCCCh---HHHHHHHHHHHCCCeEEEEcc
Confidence 78888888764 457899999999999998864
No 261
>3ga2_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Bacillus subtilis}
Probab=37.86 E-value=35 Score=29.91 Aligned_cols=40 Identities=25% Similarity=0.234 Sum_probs=31.2
Q ss_pred HHHHHHHHcCCCCceEEEecCCcc-------cHHHHHHHhCCceEEE
Q 011848 99 PLLKEMVSDSKSPVNCIITDGYMS-------RAIDAAREVGVSIIYF 138 (476)
Q Consensus 99 ~~~~~ll~~~~~~~D~Ii~D~~~~-------~~~~~A~~lgiP~v~~ 138 (476)
+.+.+.++++..+||+|++|..-. -|..+.-.+|+|+|-+
T Consensus 97 P~ll~al~~L~~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGV 143 (246)
T 3ga2_A 97 PLIIEAAKKLETEPDVFLFDGNGYLHYNHMGVATHAAFFLGKPTIGI 143 (246)
T ss_dssp HHHHHHHHHCSSCCSCEEEEBCSSSSTTSCCHHHHHHHHHTSCEEEE
T ss_pred HHHHHHHHhcCCCCCEEEEcCcEEecCCCcchhheeeeecCCCEEee
Confidence 455566666656899999998755 5778888899999987
No 262
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=37.81 E-value=38 Score=29.88 Aligned_cols=38 Identities=13% Similarity=0.194 Sum_probs=27.3
Q ss_pred CCCCCccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 1 MEKQDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 1 m~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
|.+++. |+++++.++.| =-.++++.|+++|++|.++.-
T Consensus 1 m~~l~~-k~vlITGas~g---IG~aia~~l~~~G~~V~~~~r 38 (263)
T 2a4k_A 1 MGRLSG-KTILVTGAASG---IGRAALDLFAREGASLVAVDR 38 (263)
T ss_dssp -CTTTT-CEEEEESTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCCC-CEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 555533 66777776653 356899999999999998875
No 263
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=37.72 E-value=34 Score=31.46 Aligned_cols=35 Identities=23% Similarity=0.332 Sum_probs=23.8
Q ss_pred CCccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 4 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
++|++|++. |+.|.+ -..|++.|.++||+|+.+.-
T Consensus 25 ~~~~~vlVt--GatG~i--G~~l~~~L~~~g~~V~~~~r 59 (343)
T 2b69_A 25 KDRKRILIT--GGAGFV--GSHLTDKLMMDGHEVTVVDN 59 (343)
T ss_dssp --CCEEEEE--TTTSHH--HHHHHHHHHHTTCEEEEEEC
T ss_pred cCCCEEEEE--cCccHH--HHHHHHHHHHCCCEEEEEeC
Confidence 345676655 334433 46788999999999999874
No 264
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=37.67 E-value=36 Score=29.50 Aligned_cols=23 Identities=13% Similarity=0.196 Sum_probs=19.4
Q ss_pred HHHHHHHHHHhCCCEEEEEeCcc
Q 011848 22 SMLNLAELLGHAGIKITFLNTEH 44 (476)
Q Consensus 22 p~l~La~~L~~rGH~Vt~~~~~~ 44 (476)
--.++|++|+++|++|+++..+.
T Consensus 36 iG~aiA~~~~~~Ga~V~l~~~~~ 58 (226)
T 1u7z_A 36 MGFAIAAAAARRGANVTLVSGPV 58 (226)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSC
T ss_pred HHHHHHHHHHHCCCEEEEEECCc
Confidence 46789999999999999987643
No 265
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=37.61 E-value=40 Score=29.33 Aligned_cols=34 Identities=15% Similarity=0.128 Sum_probs=27.1
Q ss_pred ccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 6 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
|.|+++++.++.| --.++++.|+++|++|.+...
T Consensus 3 ~~k~~lVTGas~g---IG~~ia~~l~~~G~~V~~~~~ 36 (246)
T 3osu_A 3 MTKSALVTGASRG---IGRSIALQLAEEGYNVAVNYA 36 (246)
T ss_dssp CSCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEeC
Confidence 3478888887764 456889999999999988765
No 266
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=37.57 E-value=54 Score=28.14 Aligned_cols=39 Identities=10% Similarity=0.196 Sum_probs=29.0
Q ss_pred CccEEEEEcCCCccCH----HHHHHHHHHHHhCCCEEEEEeCc
Q 011848 5 DHVHVAILPLPAVGHV----NSMLNLAELLGHAGIKITFLNTE 43 (476)
Q Consensus 5 ~~~~il~~~~~~~GH~----~p~l~La~~L~~rGH~Vt~~~~~ 43 (476)
+|.+|.+++....+-- .-...|++.|+++|+.|+.-...
T Consensus 12 ~m~~IaV~cGS~~~~~~~y~~~A~~lg~~LA~~G~~vVsGGg~ 54 (215)
T 2a33_A 12 KFRRICVFCGSSQGKKSSYQDAAVDLGNELVSRNIDLVYGGGS 54 (215)
T ss_dssp SCSEEEEECCSSCCSSHHHHHHHHHHHHHHHHTTCEEEECCCS
T ss_pred CCCeEEEEECCCCCCchHHHHHHHHHHHHHHHCCCEEEECCCh
Confidence 3557999988776542 34678899999999999776654
No 267
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=37.48 E-value=40 Score=29.59 Aligned_cols=32 Identities=19% Similarity=0.115 Sum_probs=26.5
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 8 ~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
|+++++.++.| --.++|++|+++|++|.+..-
T Consensus 9 k~~lVTGas~g---IG~a~a~~l~~~G~~V~~~~r 40 (255)
T 4eso_A 9 KKAIVIGGTHG---MGLATVRRLVEGGAEVLLTGR 40 (255)
T ss_dssp CEEEEETCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 78888887764 456899999999999988875
No 268
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=37.44 E-value=41 Score=29.99 Aligned_cols=33 Identities=27% Similarity=0.275 Sum_probs=27.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
.|+++++.++.| --.++|+.|+++|++|.++..
T Consensus 29 ~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~~ 61 (280)
T 4da9_A 29 RPVAIVTGGRRG---IGLGIARALAASGFDIAITGI 61 (280)
T ss_dssp CCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEecCCCH---HHHHHHHHHHHCCCeEEEEeC
Confidence 378888888764 456899999999999998874
No 269
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=37.35 E-value=32 Score=30.09 Aligned_cols=33 Identities=24% Similarity=0.254 Sum_probs=25.4
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCc
Q 011848 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTE 43 (476)
Q Consensus 8 ~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 43 (476)
|.++++.++.| --..+++.|+++|++|.++...
T Consensus 14 k~vlItGasgg---iG~~la~~l~~~G~~V~~~~r~ 46 (260)
T 3awd_A 14 RVAIVTGGAQN---IGLACVTALAEAGARVIIADLD 46 (260)
T ss_dssp CEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCCch---HHHHHHHHHHHCCCEEEEEeCC
Confidence 66777766543 3568999999999999988753
No 270
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=37.33 E-value=32 Score=30.74 Aligned_cols=34 Identities=21% Similarity=0.147 Sum_probs=26.7
Q ss_pred ccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 6 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
+.|+++++.++.| --.++|+.|+++|++|.++..
T Consensus 23 ~~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~r 56 (279)
T 3sju_A 23 RPQTAFVTGVSSG---IGLAVARTLAARGIAVYGCAR 56 (279)
T ss_dssp --CEEEEESTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 3478899988764 457899999999999988765
No 271
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=37.32 E-value=43 Score=30.46 Aligned_cols=44 Identities=20% Similarity=0.318 Sum_probs=30.4
Q ss_pred CCCCCccEEEEEcCCCccC--H-HHHHHHHHHHHhCCCEEEEEeCcc
Q 011848 1 MEKQDHVHVAILPLPAVGH--V-NSMLNLAELLGHAGIKITFLNTEH 44 (476)
Q Consensus 1 m~~~~~~~il~~~~~~~GH--~-~p~l~La~~L~~rGH~Vt~~~~~~ 44 (476)
|.+.+|+|++++..|..|. . .-.-.+.+.|.++|+++.+..+..
T Consensus 3 m~~~~m~~~~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~t~~ 49 (304)
T 3s40_A 3 MTKTKFEKVLLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTKE 49 (304)
T ss_dssp --CCSCSSEEEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEECCS
T ss_pred CccCCCCEEEEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEEccC
Confidence 5555677888888886553 2 234567788889999999887644
No 272
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=37.30 E-value=51 Score=29.97 Aligned_cols=39 Identities=21% Similarity=0.093 Sum_probs=30.7
Q ss_pred ccEEEEEcCCCccC----HHHHHHHHHHHHhCCCEEEEEeCcc
Q 011848 6 HVHVAILPLPAVGH----VNSMLNLAELLGHAGIKITFLNTEH 44 (476)
Q Consensus 6 ~~~il~~~~~~~GH----~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (476)
++||+++..+..+- +.....++++|.++||+|..+.+..
T Consensus 13 ~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~g~~v~~i~~~~ 55 (317)
T 4eg0_A 13 FGKVAVLFGGESAEREVSLTSGRLVLQGLRDAGIDAHPFDPAE 55 (317)
T ss_dssp GCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTTT
T ss_pred cceEEEEECCCCCcceeeHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 46899998875442 3467889999999999999998544
No 273
>3k9g_A PF-32 protein; ssgcid, SBRI, decode biostructures, UW, NIH, niaid, borellia burgdorferi, plasmid partition protein, iodide; 2.25A {Borrelia burgdorferi} PDB: 3k9h_A
Probab=37.27 E-value=28 Score=30.76 Aligned_cols=38 Identities=21% Similarity=0.337 Sum_probs=30.7
Q ss_pred ccEEEEEcC--CCccCHHHHHHHHHHHHhCCCEEEEEeCcc
Q 011848 6 HVHVAILPL--PAVGHVNSMLNLAELLGHAGIKITFLNTEH 44 (476)
Q Consensus 6 ~~~il~~~~--~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (476)
++||+.+.. |+-|-..-...||..|+ +|++|.++-...
T Consensus 26 ~~~vI~v~s~kGGvGKTT~a~~LA~~la-~g~~VlliD~D~ 65 (267)
T 3k9g_A 26 KPKIITIASIKGGVGKSTSAIILATLLS-KNNKVLLIDMDT 65 (267)
T ss_dssp CCEEEEECCSSSSSCHHHHHHHHHHHHT-TTSCEEEEEECT
T ss_pred CCeEEEEEeCCCCchHHHHHHHHHHHHH-CCCCEEEEECCC
Confidence 456655544 67899999999999999 999999997643
No 274
>3u7i_A FMN-dependent NADH-azoreductase 1; structural genomics, the center for structural genomics of I diseases, csgid, oxidoreductase; HET: MSE; 1.75A {Bacillus anthracis}
Probab=36.47 E-value=30 Score=29.91 Aligned_cols=40 Identities=10% Similarity=0.026 Sum_probs=23.2
Q ss_pred CCCccEEEEEcCCCc-----cCHHHHH-HHHHHHHhC--CC-EEEEEeC
Q 011848 3 KQDHVHVAILPLPAV-----GHVNSML-NLAELLGHA--GI-KITFLNT 42 (476)
Q Consensus 3 ~~~~~~il~~~~~~~-----GH~~p~l-~La~~L~~r--GH-~Vt~~~~ 42 (476)
|+.||||+++...-+ |...-+. .+++.|.++ || +|+++--
T Consensus 1 ~~~MmkIL~I~gSpr~~~~~S~s~~L~~~~~~~l~~~~~~~~ev~~idL 49 (223)
T 3u7i_A 1 SNAMNKTLIINAHPKVDDTSSVSIKVFKHFLESYKELISNNETIEQINL 49 (223)
T ss_dssp --CCCEEEEEECCTTTTCTTSHHHHHHHHHHHHHHHHCCSSCEEEEEET
T ss_pred CCccCEEEEEEeCCCCCCCCChHHHHHHHHHHHHHHhCCCCCeEEEEEC
Confidence 456889988876544 3333332 344555554 68 8888765
No 275
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=36.31 E-value=45 Score=29.69 Aligned_cols=38 Identities=18% Similarity=0.199 Sum_probs=27.8
Q ss_pred CCCCCccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 1 MEKQDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 1 m~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
|..+. .|+++++.++.| --.++++.|+++|++|+++.-
T Consensus 1 m~~l~-~k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r 38 (280)
T 1xkq_A 1 MPRFS-NKTVIITGSSNG---IGRTTAILFAQEGANVTITGR 38 (280)
T ss_dssp -CTTT-TCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCC-CCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEeC
Confidence 44443 377888887663 356789999999999998864
No 276
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=36.30 E-value=47 Score=29.45 Aligned_cols=40 Identities=13% Similarity=0.059 Sum_probs=27.1
Q ss_pred CCCCCccEEEEEcCCCc-cCHHHHHHHHHHHHhCCCEEEEEeCc
Q 011848 1 MEKQDHVHVAILPLPAV-GHVNSMLNLAELLGHAGIKITFLNTE 43 (476)
Q Consensus 1 m~~~~~~~il~~~~~~~-GH~~p~l~La~~L~~rGH~Vt~~~~~ 43 (476)
|..++ .|+++++.++. |-+ -.++++.|+++|++|.++.-.
T Consensus 1 M~~l~-~k~vlVTGas~~~gI--G~~~a~~l~~~G~~V~~~~r~ 41 (275)
T 2pd4_A 1 MGFLK-GKKGLIVGVANNKSI--AYGIAQSCFNQGATLAFTYLN 41 (275)
T ss_dssp -CTTT-TCEEEEECCCSTTSH--HHHHHHHHHTTTCEEEEEESS
T ss_pred CCCCC-CCEEEEECCCCCCcH--HHHHHHHHHHCCCEEEEEeCC
Confidence 44443 36777777651 322 468999999999999988753
No 277
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=36.16 E-value=52 Score=29.10 Aligned_cols=38 Identities=26% Similarity=0.264 Sum_probs=27.6
Q ss_pred CCCCCccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 1 MEKQDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 1 m~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
|.++. .|+++++.++.| --.++++.|+++|++|.++.-
T Consensus 1 m~~~~-~k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r 38 (278)
T 1spx_A 1 MTRFA-EKVAIITGSSNG---IGRATAVLFAREGAKVTITGR 38 (278)
T ss_dssp -CTTT-TCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCCC-CCEEEEeCCCch---HHHHHHHHHHHCCCEEEEEeC
Confidence 55543 367788877653 356889999999999998875
No 278
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=36.13 E-value=71 Score=28.34 Aligned_cols=34 Identities=9% Similarity=0.147 Sum_probs=26.2
Q ss_pred EEEEEcCCC--ccCHHHHHHHHHHHHhCCCEEEEEeCcc
Q 011848 8 HVAILPLPA--VGHVNSMLNLAELLGHAGIKITFLNTEH 44 (476)
Q Consensus 8 ~il~~~~~~--~GH~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (476)
|+++++.++ .| --.++|+.|+++|++|.++....
T Consensus 27 k~vlVTGasg~~G---IG~~ia~~l~~~G~~V~~~~r~~ 62 (280)
T 3nrc_A 27 KKILITGLLSNKS---IAYGIAKAMHREGAELAFTYVGQ 62 (280)
T ss_dssp CEEEECCCCSTTC---HHHHHHHHHHHTTCEEEEEECTT
T ss_pred CEEEEECCCCCCC---HHHHHHHHHHHcCCEEEEeeCch
Confidence 788888855 22 24689999999999999887644
No 279
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=35.88 E-value=1.9e+02 Score=24.34 Aligned_cols=138 Identities=12% Similarity=-0.002 Sum_probs=73.7
Q ss_pred CCceEEEEecccccCCHHHHHHHHHHHhhCCCcEEEEEcCCCCCCCCCCCCCch--------HHHHHhcCCceeeec--c
Q 011848 282 KQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPE--------ELLEATKERGCIAGW--V 351 (476)
Q Consensus 282 ~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~--------~~~~~~~~nv~~~~~--v 351 (476)
++.+++.-.|+.... +....+++.|.+.+..+-.++...... -..+. .+. ...++-.+.++ .
T Consensus 7 ~k~I~lgiTGs~aa~--~k~~~ll~~L~~~g~eV~vv~T~~A~~-----~i~~~~~~~~~~~~l~-~l~g~~v~~~~~~~ 78 (201)
T 3lqk_A 7 GKHVGFGLTGSHCTY--HEVLPQMERLVELGAKVTPFVTHTVQT-----TDTKFGESSEWINKIK-QITEEPIVDSMVKA 78 (201)
T ss_dssp TCEEEEECCSCGGGG--GGTHHHHHHHHHTTCEEEEECSSCSCC-----TTCCTTCSCHHHHHHH-HHCCSCCBCSHHHH
T ss_pred CCEEEEEEEChHHHH--HHHHHHHHHHhhCCCEEEEEEChhHHH-----HHHHhhchhHHHHHHH-HHhCCCeEeecCcc
Confidence 466666666776532 022344555555677766665433111 01111 222 22233222222 1
Q ss_pred CHHHHhCcCCCCccccccChhHHH----------------HHHHhCCceecccc----ccchhhhhHhhhcceeeeEEec
Q 011848 352 PQEEVLAHSAVGGFLTHCGWNSTL----------------ESIVAGMPMICWPS----FADQQINSRFVGEVWKLGLDIK 411 (476)
Q Consensus 352 p~~~ll~~~~~~~~I~HgG~gs~~----------------eal~~GvP~l~~P~----~~DQ~~na~r~~e~~G~g~~~~ 411 (476)
++-.+-..+++ .+|-=|-.||+. .++..++|++++|- ....+.|-.++. +.|+=+..+
T Consensus 79 ~hi~~s~~aD~-mvIaP~TanTlAkiA~GiaDnLlt~aa~~~Lk~~~plvl~Pamn~~m~~h~~Nm~~L~-~~G~~i~~P 156 (201)
T 3lqk_A 79 EPFGPKTPLDC-MVIAPMTGNSTSKFANAMTDSPVLMGAKATLRNGKPVVVGISTNDALGLNGINIMRLM-ATKNIYFIP 156 (201)
T ss_dssp GGGTTTSCCSE-EEEEEECHHHHHHHHTTCCCSHHHHHHHHHHHTTCCEEEEEEETTTTTTTHHHHHHHH-TSTTEEECC
T ss_pred cccccccccCE-EEEccCCHHHHHHHHCcccCcHHHHHHHHHhhcCCCEEEEECCChhHHHhHHHHHHHH-HCCCEEECC
Confidence 23233333443 456555555433 23557999999995 356777999995 678765543
Q ss_pred c------------ccCHHHHHHHHHHHHhH
Q 011848 412 D------------LCDRNIVEKAVNDLMVE 429 (476)
Q Consensus 412 ~------------~~~~~~l~~ai~~~l~~ 429 (476)
. ..+.+.|.+.|.+.|+.
T Consensus 157 ~~~~~~~~~p~s~~a~~~~i~~tv~~al~~ 186 (201)
T 3lqk_A 157 FGQDNPQVKPNSLVARMEALPETIEAALRG 186 (201)
T ss_dssp EEESCTTTCTTCEEECGGGHHHHHHHHHTT
T ss_pred CCccccccCCCcccCCHHHHHHHHHHHHhc
Confidence 1 23447888888888873
No 280
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=35.88 E-value=27 Score=29.99 Aligned_cols=33 Identities=15% Similarity=0.189 Sum_probs=24.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
||+++++.++.| --.++++.|+++|++|.++..
T Consensus 1 Mk~vlVTGas~g---IG~~~a~~l~~~G~~V~~~~r 33 (230)
T 3guy_A 1 MSLIVITGASSG---LGAELAKLYDAEGKATYLTGR 33 (230)
T ss_dssp --CEEEESTTSH---HHHHHHHHHHHTTCCEEEEES
T ss_pred CCEEEEecCCch---HHHHHHHHHHHCCCEEEEEeC
Confidence 467777777653 457889999999999988875
No 281
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=35.85 E-value=39 Score=29.55 Aligned_cols=33 Identities=6% Similarity=-0.124 Sum_probs=27.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
.|+++++.++.| --.++|+.|+++|++|.++.-
T Consensus 7 ~k~vlVTGas~G---IG~aia~~l~~~G~~V~~~~r 39 (252)
T 3h7a_A 7 NATVAVIGAGDY---IGAEIAKKFAAEGFTVFAGRR 39 (252)
T ss_dssp SCEEEEECCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCch---HHHHHHHHHHHCCCEEEEEeC
Confidence 478888887764 357899999999999998875
No 282
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=35.68 E-value=29 Score=33.93 Aligned_cols=32 Identities=16% Similarity=0.267 Sum_probs=26.5
Q ss_pred ccEEEEEcCCCccCHHHHHHHHHHHHhC--CCEEEEEeC
Q 011848 6 HVHVAILPLPAVGHVNSMLNLAELLGHA--GIKITFLNT 42 (476)
Q Consensus 6 ~~~il~~~~~~~GH~~p~l~La~~L~~r--GH~Vt~~~~ 42 (476)
||||.|+-.|..| ..+|..|+++ ||+|+++..
T Consensus 5 ~mkI~VIG~G~mG-----~~lA~~La~~g~G~~V~~~d~ 38 (467)
T 2q3e_A 5 IKKICCIGAGYVG-----GPTCSVIAHMCPEIRVTVVDV 38 (467)
T ss_dssp CCEEEEECCSTTH-----HHHHHHHHHHCTTSEEEEECS
T ss_pred ccEEEEECCCHHH-----HHHHHHHHhcCCCCEEEEEEC
Confidence 5799999887776 5678889988 899998864
No 283
>3p0r_A Azoreductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 1.80A {Bacillus anthracis}
Probab=35.68 E-value=30 Score=29.53 Aligned_cols=37 Identities=8% Similarity=0.010 Sum_probs=22.6
Q ss_pred ccEEEEEcCCCc-cC---HHHHH-HHHHHHHhC--CCEEEEEeC
Q 011848 6 HVHVAILPLPAV-GH---VNSML-NLAELLGHA--GIKITFLNT 42 (476)
Q Consensus 6 ~~~il~~~~~~~-GH---~~p~l-~La~~L~~r--GH~Vt~~~~ 42 (476)
||||+++...-. |. ..-+. .+.+.|.++ ||+|+++--
T Consensus 4 M~kiLiI~gSpr~~~~S~s~~l~~~~~~~~~~~~~g~ev~~~dL 47 (211)
T 3p0r_A 4 MTKVLFVKANNRPAEQAVSVKLYEAFLASYKEAHPNDTVVELDL 47 (211)
T ss_dssp CCEEEEEECCCSCTTTCHHHHHHHHHHHHHHHHCTTSEEEEEEG
T ss_pred cCEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCCeEEEEEC
Confidence 779988776554 22 22222 345555555 899988764
No 284
>4f3r_A Phosphopantetheine adenylyltransferase; phosphopantetheine adenylyltranferase; 2.25A {Coxiella burnetii}
Probab=35.67 E-value=35 Score=27.80 Aligned_cols=40 Identities=18% Similarity=-0.004 Sum_probs=23.7
Q ss_pred CCCccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 3 KQDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 3 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
++.|||++++++.--.=.+-.+.++++.++.+.+|.++..
T Consensus 1 ~~~mm~i~i~~GsFDPiH~GHl~li~~A~~~~d~viv~v~ 40 (162)
T 4f3r_A 1 SNAMKPIAIYPGTFDPLTNGHVDIIERALPLFNKIIVACA 40 (162)
T ss_dssp ----CCEEEEEECCTTCCHHHHHHHHHHGGGCSEEEEEEC
T ss_pred CCCceEEEEEEEEcCCCCHHHHHHHHHHHHHCCcEEEEEe
Confidence 4668899888874333333345677777777777777665
No 285
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=35.66 E-value=1.4e+02 Score=24.04 Aligned_cols=138 Identities=10% Similarity=0.082 Sum_probs=71.1
Q ss_pred ceEEEEecccccCCHHHHHHHHHHHhhCCCcEEEEEcCCCCCCCCCCCCCchHHHHHhcCCceeeeccCHHHHhCcCCCC
Q 011848 284 SVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVG 363 (476)
Q Consensus 284 ~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~vp~~~ll~~~~~~ 363 (476)
|.|-|-+||.. +-...++....++..+..+-..+- +...+|+.+.+- +...+ ..-..+
T Consensus 3 ~~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~--------saHR~p~~~~~~----------~~~a~--~~~~~~ 60 (159)
T 3rg8_A 3 PLVIILMGSSS--DMGHAEKIASELKTFGIEYAIRIG--------SAHKTAEHVVSM----------LKEYE--ALDRPK 60 (159)
T ss_dssp CEEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEEC--------CTTTCHHHHHHH----------HHHHH--TSCSCE
T ss_pred CeEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEE--------cccCCHHHHHHH----------HHHhh--hcCCCc
Confidence 45667777764 556677788888888877655552 222455544321 11000 000122
Q ss_pred ccccccCh----hHHHHHHHhCCceecccccc---chhhhhHhhhc-ceeeeEE-eccccCHHHHHHHHHHHHhHhHHHH
Q 011848 364 GFLTHCGW----NSTLESIVAGMPMICWPSFA---DQQINSRFVGE-VWKLGLD-IKDLCDRNIVEKAVNDLMVERKEEF 434 (476)
Q Consensus 364 ~~I~HgG~----gs~~eal~~GvP~l~~P~~~---DQ~~na~r~~e-~~G~g~~-~~~~~~~~~l~~ai~~~l~~~~~~~ 434 (476)
.+|.=+|. .++.-+ ..-.|++.+|... +-.+ -.-+.. -.|+.+. ++.-.++..++..|..+ +| +.+
T Consensus 61 ViIa~AG~aa~LpgvvA~-~t~~PVIgVP~~~~~l~G~d-LlS~vqmp~GvpVatv~~~~nAa~lA~~Il~~-~d--~~l 135 (159)
T 3rg8_A 61 LYITIAGRSNALSGFVDG-FVKGATIACPPPSDSFAGAD-IYSSLRMPSGISPALVLEPKNAALLAARIFSL-YD--KEI 135 (159)
T ss_dssp EEEEECCSSCCHHHHHHH-HSSSCEEECCCCCCGGGGTH-HHHHHCCCTTCCCEECCSHHHHHHHHHHHHTT-TC--HHH
T ss_pred EEEEECCchhhhHHHHHh-ccCCCEEEeeCCCCCCCCcc-HHHHHhCCCCCceEEecCchHHHHHHHHHHhC-CC--HHH
Confidence 36655553 233333 3568888888542 1111 111111 1244432 23445555555444433 35 788
Q ss_pred HHHHHHHHHHHHHH
Q 011848 435 MESADRMANLAKKS 448 (476)
Q Consensus 435 ~~~a~~l~~~~~~~ 448 (476)
+++.+..+++.++.
T Consensus 136 ~~kl~~~r~~~~~~ 149 (159)
T 3rg8_A 136 ADSVKSYMESNAQK 149 (159)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 88888888777664
No 286
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=35.64 E-value=53 Score=29.10 Aligned_cols=33 Identities=12% Similarity=0.074 Sum_probs=28.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
-|++++|.++.| =-.++|+.|+++|++|.+..-
T Consensus 11 GK~alVTGas~G---IG~aia~~la~~Ga~V~~~~r 43 (261)
T 4h15_A 11 GKRALITAGTKG---AGAATVSLFLELGAQVLTTAR 43 (261)
T ss_dssp TCEEEESCCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeccCcH---HHHHHHHHHHHcCCEEEEEEC
Confidence 389999999886 357899999999999988764
No 287
>2zts_A Putative uncharacterized protein PH0186; KAIC like protein, ATP-binding, nucleotide-binding, ATP- binding protein; HET: ADP; 2.07A {Pyrococcus horikoshii}
Probab=35.62 E-value=87 Score=26.81 Aligned_cols=43 Identities=12% Similarity=0.002 Sum_probs=32.8
Q ss_pred EEEEEcCCCccCHHHHHHHHHH-HHhCCCEEEEEeCccchhhHh
Q 011848 8 HVAILPLPAVGHVNSMLNLAEL-LGHAGIKITFLNTEHYYDRVI 50 (476)
Q Consensus 8 ~il~~~~~~~GH~~p~l~La~~-L~~rGH~Vt~~~~~~~~~~~~ 50 (476)
=+++...|+.|-..-++.++.. +.+.|..|.+++.+...+.+.
T Consensus 32 l~~i~G~pG~GKT~l~l~~~~~~~~~~~~~v~~~s~E~~~~~~~ 75 (251)
T 2zts_A 32 TVLLTGGTGTGKTTFAAQFIYKGAEEYGEPGVFVTLEERARDLR 75 (251)
T ss_dssp EEEEECCTTSSHHHHHHHHHHHHHHHHCCCEEEEESSSCHHHHH
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHhcCCCceeecccCCHHHHH
Confidence 3567777899999999998765 455688999999876655443
No 288
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=35.31 E-value=74 Score=24.65 Aligned_cols=63 Identities=8% Similarity=0.015 Sum_probs=37.6
Q ss_pred hCCceeccccccchhhhhHhhhccee-eeEEeccccCHHHHHHHHHHHHhHhHHHH-HHHHHHHHHHHH
Q 011848 380 AGMPMICWPSFADQQINSRFVGEVWK-LGLDIKDLCDRNIVEKAVNDLMVERKEEF-MESADRMANLAK 446 (476)
Q Consensus 380 ~GvP~l~~P~~~DQ~~na~r~~e~~G-~g~~~~~~~~~~~l~~ai~~~l~~~~~~~-~~~a~~l~~~~~ 446 (476)
..+|++++-...|.......+ +.| +--.+.+.++.++|.++|++++.. ..+ ++..+.+++.+.
T Consensus 75 ~~~~ii~~s~~~~~~~~~~~~--~~g~~~~~l~KP~~~~~L~~~i~~~l~~--~~~~~~~~~~~~~~~~ 139 (151)
T 3kcn_A 75 PNSVYLMLTGNQDLTTAMEAV--NEGQVFRFLNKPCQMSDIKAAINAGIKQ--YDLVTSKEELLKKTFA 139 (151)
T ss_dssp SSCEEEEEECGGGHHHHHHHH--HHTCCSEEEESSCCHHHHHHHHHHHHHH--HHHHHHHHHHHHHC--
T ss_pred CCcEEEEEECCCCHHHHHHHH--HcCCeeEEEcCCCCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHh
Confidence 467777765544443333333 356 545566889999999999999984 333 333344444433
No 289
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=35.29 E-value=34 Score=31.02 Aligned_cols=34 Identities=6% Similarity=-0.102 Sum_probs=24.4
Q ss_pred ccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCc
Q 011848 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTE 43 (476)
Q Consensus 6 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 43 (476)
|++|++. |+.|.+ -..|+++|.++||+|+.++-.
T Consensus 4 ~~~ilVt--GatG~i--G~~l~~~L~~~g~~V~~~~R~ 37 (321)
T 3c1o_A 4 MEKIIIY--GGTGYI--GKFMVRASLSFSHPTFIYARP 37 (321)
T ss_dssp CCCEEEE--TTTSTT--HHHHHHHHHHTTCCEEEEECC
T ss_pred ccEEEEE--cCCchh--HHHHHHHHHhCCCcEEEEECC
Confidence 4566665 344444 347889999999999998864
No 290
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=35.24 E-value=46 Score=29.59 Aligned_cols=33 Identities=18% Similarity=0.054 Sum_probs=27.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
.|+++++.++.| =-.++|+.|+++|++|.++.-
T Consensus 30 ~k~vlVTGas~G---IG~aia~~l~~~G~~Vi~~~r 62 (281)
T 3ppi_A 30 GASAIVSGGAGG---LGEATVRRLHADGLGVVIADL 62 (281)
T ss_dssp TEEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEeC
Confidence 378888888775 457899999999999988764
No 291
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=35.07 E-value=65 Score=30.03 Aligned_cols=26 Identities=19% Similarity=0.436 Sum_probs=20.3
Q ss_pred cCCCCccccccChhHH---HHHHHhCCceec
Q 011848 359 HSAVGGFLTHCGWNST---LESIVAGMPMIC 386 (476)
Q Consensus 359 ~~~~~~~I~HgG~gs~---~eal~~GvP~l~ 386 (476)
.+|+ +|++||.-++ ..|-..|+|.++
T Consensus 92 ~PDv--Vi~~g~~~s~p~~laA~~~~iP~vi 120 (365)
T 3s2u_A 92 RPVC--VLGLGGYVTGPGGLAARLNGVPLVI 120 (365)
T ss_dssp CCSE--EEECSSSTHHHHHHHHHHTTCCEEE
T ss_pred CCCE--EEEcCCcchHHHHHHHHHcCCCEEE
Confidence 5666 9999998765 456778999985
No 292
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=35.06 E-value=47 Score=24.84 Aligned_cols=36 Identities=6% Similarity=0.045 Sum_probs=28.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
|||+++|..+.|+-.-.-.|-+.+.++|.++.+-..
T Consensus 5 mkIlvvC~~G~~TSll~~kl~~~~~~~gi~~~i~~~ 40 (109)
T 2l2q_A 5 MNILLVCGAGMSTSMLVQRIEKYAKSKNINATIEAI 40 (109)
T ss_dssp EEEEEESSSSCSSCHHHHHHHHHHHHHTCSEEEEEE
T ss_pred eEEEEECCChHhHHHHHHHHHHHHHHCCCCeEEEEe
Confidence 689999999998886666777888888988765443
No 293
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=34.95 E-value=20 Score=32.71 Aligned_cols=39 Identities=15% Similarity=0.102 Sum_probs=29.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCccc-hhhHhh
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHY-YDRVIR 51 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~-~~~~~~ 51 (476)
|||+|+-.|+.|- .+|..|+ +||+|+++..... .+.+.+
T Consensus 3 mkI~IiGaGa~G~-----~~a~~L~-~g~~V~~~~r~~~~~~~l~~ 42 (307)
T 3ego_A 3 LKIGIIGGGSVGL-----LCAYYLS-LYHDVTVVTRRQEQAAAIQS 42 (307)
T ss_dssp CEEEEECCSHHHH-----HHHHHHH-TTSEEEEECSCHHHHHHHHH
T ss_pred CEEEEECCCHHHH-----HHHHHHh-cCCceEEEECCHHHHHHHHh
Confidence 6999999998885 5688888 9999999986542 334443
No 294
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=34.94 E-value=15 Score=31.53 Aligned_cols=32 Identities=16% Similarity=0.174 Sum_probs=24.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCc
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTE 43 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 43 (476)
|||+++-.|.. -..+|+.|.++||+|+++...
T Consensus 1 M~iiIiG~G~~-----G~~la~~L~~~g~~v~vid~~ 32 (218)
T 3l4b_C 1 MKVIIIGGETT-----AYYLARSMLSRKYGVVIINKD 32 (218)
T ss_dssp CCEEEECCHHH-----HHHHHHHHHHTTCCEEEEESC
T ss_pred CEEEEECCCHH-----HHHHHHHHHhCCCeEEEEECC
Confidence 47777764333 467899999999999999863
No 295
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=34.72 E-value=45 Score=29.65 Aligned_cols=32 Identities=25% Similarity=0.171 Sum_probs=26.5
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 8 ~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
|+++++.++.| =-.++|+.|+++|++|.++..
T Consensus 16 k~~lVTGas~g---IG~a~a~~la~~G~~V~~~~r 47 (280)
T 3pgx_A 16 RVAFITGAARG---QGRSHAVRLAAEGADIIACDI 47 (280)
T ss_dssp CEEEEESTTSH---HHHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEECCCcH---HHHHHHHHHHHCCCEEEEEec
Confidence 78888888764 357899999999999998864
No 296
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=34.66 E-value=39 Score=29.58 Aligned_cols=33 Identities=18% Similarity=0.158 Sum_probs=25.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
.|+++++.++.| --.++++.|+++|++|.++..
T Consensus 2 ~k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r 34 (256)
T 1geg_A 2 KKVALVTGAGQG---IGKAIALRLVKDGFAVAIADY 34 (256)
T ss_dssp CCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEeC
Confidence 367777776653 356899999999999998865
No 297
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=34.61 E-value=20 Score=28.21 Aligned_cols=33 Identities=24% Similarity=0.281 Sum_probs=26.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCcc
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEH 44 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (476)
.||+++-.|..| ..+++.|.++||+|+++....
T Consensus 8 ~~viIiG~G~~G-----~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 8 NHALLVGYGRVG-----SLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp SCEEEECCSHHH-----HHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEECcCHHH-----HHHHHHHHHCCCCEEEEECCH
Confidence 489888766554 578999999999999998743
No 298
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=34.60 E-value=39 Score=29.46 Aligned_cols=33 Identities=18% Similarity=0.201 Sum_probs=24.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
||+++++..+.| =-.++++.|+++|++|+++.-
T Consensus 1 mk~vlVTGas~g---IG~~~a~~l~~~G~~V~~~~r 33 (257)
T 1fjh_A 1 MSIIVISGCATG---IGAATRKVLEAAGHQIVGIDI 33 (257)
T ss_dssp CCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 366677776653 356899999999999988764
No 299
>3f2v_A General stress protein 14; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: FMN; 2.00A {Treponema denticola}
Probab=34.55 E-value=25 Score=29.62 Aligned_cols=37 Identities=8% Similarity=0.093 Sum_probs=22.9
Q ss_pred ccEEEEEcC-CCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 6 HVHVAILPL-PAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 6 ~~~il~~~~-~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
||||+++.. |-.+.-.-.-++++.+.+.|++|+++--
T Consensus 1 MmkiLiI~gsp~~~~s~l~~~l~~~~~~~g~ev~~~dL 38 (192)
T 3f2v_A 1 MPKTLIILAHPNISQSTVHKHWSDAVRQHTDRFTVHEL 38 (192)
T ss_dssp -CCEEEEECCTTGGGCSHHHHHHHHHTTCTTTEEEEEH
T ss_pred CCEEEEEEeCCCccHHHHHHHHHHHHHhCCCeEEEEEc
Confidence 568876655 4333212345567777778998888764
No 300
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=34.42 E-value=53 Score=29.02 Aligned_cols=32 Identities=16% Similarity=0.104 Sum_probs=26.6
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 8 ~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
|+++++.++.| --.++|+.|+++|++|.+...
T Consensus 28 k~vlVTGas~g---IG~aia~~la~~G~~V~~~~r 59 (266)
T 3grp_A 28 RKALVTGATGG---IGEAIARCFHAQGAIVGLHGT 59 (266)
T ss_dssp CEEEESSTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 78888888764 457899999999999988875
No 301
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=34.32 E-value=36 Score=30.16 Aligned_cols=33 Identities=12% Similarity=0.184 Sum_probs=27.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
.|+++++.++.| --.++++.|+++|++|.++.-
T Consensus 16 ~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r 48 (266)
T 3p19_A 16 KKLVVITGASSG---IGEAIARRFSEEGHPLLLLAR 48 (266)
T ss_dssp CCEEEEESTTSH---HHHHHHHHHHHTTCCEEEEES
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEEC
Confidence 478888888764 356889999999999998875
No 302
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=34.21 E-value=25 Score=30.12 Aligned_cols=33 Identities=24% Similarity=0.215 Sum_probs=24.4
Q ss_pred CccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 5 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
.++||+|+-.|..| ..+++.|.+.||+|+++..
T Consensus 27 ~~~~I~iiG~G~~G-----~~la~~l~~~g~~V~~~~r 59 (215)
T 2vns_A 27 EAPKVGILGSGDFA-----RSLATRLVGSGFKVVVGSR 59 (215)
T ss_dssp --CCEEEECCSHHH-----HHHHHHHHHTTCCEEEEES
T ss_pred CCCEEEEEccCHHH-----HHHHHHHHHCCCEEEEEeC
Confidence 46799999655554 4578889999999998764
No 303
>4em8_A Ribose 5-phosphate isomerase B; ssgcid, seattle structural genomics center for infectious DI niaid; 1.95A {Anaplasma phagocytophilum}
Probab=34.16 E-value=57 Score=26.05 Aligned_cols=39 Identities=13% Similarity=-0.036 Sum_probs=26.8
Q ss_pred CCCCccEEEEEcCCCccCHHHHH-HHHHHHHhCCCEEEEEeCc
Q 011848 2 EKQDHVHVAILPLPAVGHVNSML-NLAELLGHAGIKITFLNTE 43 (476)
Q Consensus 2 ~~~~~~~il~~~~~~~GH~~p~l-~La~~L~~rGH~Vt~~~~~ 43 (476)
+||.||||.+-+=.+- +.+. .|.+.|.++||+|.=+++.
T Consensus 3 ~~m~~mkI~igsDhaG---~~lK~~i~~~L~~~G~eV~D~G~~ 42 (148)
T 4em8_A 3 GSMVVKRVFLSSDHAG---VELRLFLSAYLRDLGCEVFDCGCD 42 (148)
T ss_dssp CCCSCSEEEEEECGGG---HHHHHHHHHHHHHTTCEEEECCCC
T ss_pred CcceeeEEEEEECchh---HHHHHHHHHHHHHCCCEEEEeCCC
Confidence 4788889887653221 3333 5677888899999877763
No 304
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=34.13 E-value=37 Score=31.29 Aligned_cols=34 Identities=24% Similarity=0.115 Sum_probs=24.4
Q ss_pred CccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 5 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
.|++|++. |+.|-+ -..|++.|.++||+|+.+.-
T Consensus 26 ~~~~vlVt--GatG~i--G~~l~~~L~~~g~~V~~~~r 59 (352)
T 1sb8_A 26 QPKVWLIT--GVAGFI--GSNLLETLLKLDQKVVGLDN 59 (352)
T ss_dssp SCCEEEEE--TTTSHH--HHHHHHHHHHTTCEEEEEEC
T ss_pred cCCeEEEE--CCCcHH--HHHHHHHHHHCCCEEEEEeC
Confidence 45676655 334433 46789999999999999875
No 305
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=34.10 E-value=32 Score=30.10 Aligned_cols=33 Identities=24% Similarity=0.342 Sum_probs=26.5
Q ss_pred CccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 5 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
.++||.|+-.|.+| ..||+.|+++||+|++...
T Consensus 18 ~~~kIgiIG~G~mG-----~alA~~L~~~G~~V~~~~r 50 (245)
T 3dtt_A 18 QGMKIAVLGTGTVG-----RTMAGALADLGHEVTIGTR 50 (245)
T ss_dssp -CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEES
T ss_pred CCCeEEEECCCHHH-----HHHHHHHHHCCCEEEEEeC
Confidence 46799999777665 4679999999999998865
No 306
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=34.02 E-value=52 Score=28.74 Aligned_cols=33 Identities=12% Similarity=0.102 Sum_probs=25.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
.|.++++.++.| =-..+++.|+++|++|+++.-
T Consensus 7 ~k~vlITGasgg---iG~~la~~l~~~G~~V~~~~r 39 (264)
T 2pd6_A 7 SALALVTGAGSG---IGRAVSVRLAGEGATVAACDL 39 (264)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEeC
Confidence 367777776653 356889999999999998875
No 307
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=34.01 E-value=53 Score=28.86 Aligned_cols=33 Identities=12% Similarity=0.076 Sum_probs=27.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
-|+++++.++.| --.++++.|+++|++|.+...
T Consensus 11 ~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r 43 (264)
T 3ucx_A 11 DKVVVISGVGPA---LGTTLARRCAEQGADLVLAAR 43 (264)
T ss_dssp TCEEEEESCCTT---HHHHHHHHHHHTTCEEEEEES
T ss_pred CcEEEEECCCcH---HHHHHHHHHHHCcCEEEEEeC
Confidence 378888888775 357899999999999988865
No 308
>3e5n_A D-alanine-D-alanine ligase A; bacterial blight; 2.00A {Xanthomonas oryzae PV} PDB: 3r5f_A* 3rfc_A*
Probab=33.99 E-value=25 Score=33.33 Aligned_cols=41 Identities=7% Similarity=0.111 Sum_probs=30.8
Q ss_pred CCCccEEEEEcCCCccCHHH----HHHHHHHHHhCCCEEEEEeCc
Q 011848 3 KQDHVHVAILPLPAVGHVNS----MLNLAELLGHAGIKITFLNTE 43 (476)
Q Consensus 3 ~~~~~~il~~~~~~~GH~~p----~l~La~~L~~rGH~Vt~~~~~ 43 (476)
.|+++||+++..|..+---- ...++++|.+.||+|+.+...
T Consensus 19 ~m~~~~v~vl~GG~S~E~evSl~Sa~~v~~al~~~~~~v~~i~i~ 63 (386)
T 3e5n_A 19 HMRKIRVGLIFGGKSAEHEVSLQSARNILDALDPQRFEPVLIGID 63 (386)
T ss_dssp --CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred hcCCceEEEEeccCCCCchhHHHHHHHHHHHhCccCCEEEEEEEC
Confidence 36678999999886665444 448888998899999998853
No 309
>3i12_A D-alanine-D-alanine ligase A; D-alanyl-alanine synthetase A, ADP binding protein, csgid, A binding, cell shape; HET: ADP; 2.20A {Salmonella typhimurium} PDB: 3q1k_A*
Probab=33.99 E-value=25 Score=32.96 Aligned_cols=40 Identities=10% Similarity=0.174 Sum_probs=30.5
Q ss_pred CCccEEEEEcCCCccCHHH----HHHHHHHHHhCCCEEEEEeCc
Q 011848 4 QDHVHVAILPLPAVGHVNS----MLNLAELLGHAGIKITFLNTE 43 (476)
Q Consensus 4 ~~~~~il~~~~~~~GH~~p----~l~La~~L~~rGH~Vt~~~~~ 43 (476)
|.++||+++..|..+---- ...++++|.+.||+|+.+...
T Consensus 1 m~~~~v~vl~GG~S~E~evSl~S~~~v~~al~~~~~~v~~i~i~ 44 (364)
T 3i12_A 1 MAKLRVGIVFGGKSAEHEVSLQSAKNIVDAIDKTRFDVVLLGID 44 (364)
T ss_dssp -CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred CCccEEEEEeccCCCCccchHHHHHHHHHHHhhcCCeEEEEEEC
Confidence 4567999999886665444 448889998899999998853
No 310
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=33.71 E-value=14 Score=34.57 Aligned_cols=38 Identities=18% Similarity=0.238 Sum_probs=28.1
Q ss_pred CCCCccEEEEEcCCCccCHHHHHHHHHHHHhCC-------CEEEEEeCcc
Q 011848 2 EKQDHVHVAILPLPAVGHVNSMLNLAELLGHAG-------IKITFLNTEH 44 (476)
Q Consensus 2 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rG-------H~Vt~~~~~~ 44 (476)
..|.+|||+|+-.|..|. .+|..|+++| |+|+++....
T Consensus 4 ~~m~~mkI~iIG~G~mG~-----~~a~~l~~~g~~~~~~~~~V~~~~r~~ 48 (354)
T 1x0v_A 4 GSMASKKVCIVGSGNWGS-----AIAKIVGGNAAQLAQFDPRVTMWVFEE 48 (354)
T ss_dssp ---CCEEEEEECCSHHHH-----HHHHHHHHHHHHCTTEEEEEEEECCCC
T ss_pred cccCCCeEEEECCCHHHH-----HHHHHHHhcCCcccCCCCeEEEEEcCh
Confidence 345567999998887775 5688888889 9999987543
No 311
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=33.70 E-value=31 Score=29.79 Aligned_cols=39 Identities=15% Similarity=0.020 Sum_probs=31.4
Q ss_pred ccEEEEEc--CCCccCHHHHHHHHHHHHhC-CCEEEEEeCcc
Q 011848 6 HVHVAILP--LPAVGHVNSMLNLAELLGHA-GIKITFLNTEH 44 (476)
Q Consensus 6 ~~~il~~~--~~~~GH~~p~l~La~~L~~r-GH~Vt~~~~~~ 44 (476)
++||+.+. -|+-|-..-...||..|+++ |++|.++-...
T Consensus 3 ~~~vI~v~s~kGGvGKTt~a~~LA~~la~~~g~~VlliD~D~ 44 (245)
T 3ea0_A 3 AKRVFGFVSAKGGDGGSCIAANFAFALSQEPDIHVLAVDISL 44 (245)
T ss_dssp CCEEEEEEESSTTSSHHHHHHHHHHHHTTSTTCCEEEEECCT
T ss_pred CCeEEEEECCCCCcchHHHHHHHHHHHHhCcCCCEEEEECCC
Confidence 44554443 37889999999999999999 99999998754
No 312
>1t5b_A Acyl carrier protein phosphodiesterase; structural genomics, FMN, alpha/beta/alpha sandwich, PSI, protein structure initiative; HET: FMN; 1.40A {Salmonella typhimurium} SCOP: c.23.5.3 PDB: 1tik_A 2z98_A* 2d5i_A* 1v4b_A* 2z9b_A* 2z9c_A* 2z9d_A*
Probab=33.68 E-value=41 Score=28.02 Aligned_cols=38 Identities=13% Similarity=0.125 Sum_probs=25.6
Q ss_pred ccEEEEEcCCCc---cCHHHHHH-HHHHHHhCC--CEEEEEeCc
Q 011848 6 HVHVAILPLPAV---GHVNSMLN-LAELLGHAG--IKITFLNTE 43 (476)
Q Consensus 6 ~~~il~~~~~~~---GH~~p~l~-La~~L~~rG--H~Vt~~~~~ 43 (476)
||||+++..... |+..-+.. +++.|.++| |+|.++-..
T Consensus 1 Mmkilii~~S~~~~~s~t~~la~~~~~~l~~~g~~~~v~~~dl~ 44 (201)
T 1t5b_A 1 MSKVLVLKSSILAGYSQSGQLTDYFIEQWREKHVADEITVRDLA 44 (201)
T ss_dssp CCEEEEEECCSSGGGCHHHHHHHHHHHHHHHHCTTCEEEEEETT
T ss_pred CCeEEEEEeCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEecc
Confidence 568877766554 66665543 566777776 999888753
No 313
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=33.57 E-value=57 Score=29.77 Aligned_cols=33 Identities=21% Similarity=0.198 Sum_probs=26.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
.|+++++.++.| =-..|++.|+++|++|.+..-
T Consensus 8 ~k~vlVTGas~g---IG~~la~~l~~~G~~Vv~~~r 40 (319)
T 3ioy_A 8 GRTAFVTGGANG---VGIGLVRQLLNQGCKVAIADI 40 (319)
T ss_dssp TCEEEEETTTST---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEcCCchH---HHHHHHHHHHHCCCEEEEEEC
Confidence 367888887754 356899999999999988775
No 314
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=33.51 E-value=43 Score=29.42 Aligned_cols=33 Identities=6% Similarity=-0.011 Sum_probs=26.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
.|+++++.++.| --.++++.|+++|++|.+...
T Consensus 8 ~k~vlVTGas~G---IG~aia~~la~~G~~V~~~~~ 40 (259)
T 3edm_A 8 NRTIVVAGAGRD---IGRACAIRFAQEGANVVLTYN 40 (259)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEECCCch---HHHHHHHHHHHCCCEEEEEcC
Confidence 378888888764 357899999999999998843
No 315
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=33.49 E-value=43 Score=33.60 Aligned_cols=47 Identities=13% Similarity=0.051 Sum_probs=39.6
Q ss_pred ccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCccchhhHhhc
Q 011848 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRH 52 (476)
Q Consensus 6 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~ 52 (476)
..||++.+.++-.|-....-++..|..+|++|..++..-..+.+...
T Consensus 98 ~~kVLlatv~GD~HdiG~~iva~~L~~~G~eVi~LG~~vP~e~iv~a 144 (579)
T 3bul_A 98 NGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVMVPAEKILRT 144 (579)
T ss_dssp SCEEEEEEBTTCCCCHHHHHHHHHHHTTTCEEEECCSSBCHHHHHHH
T ss_pred CCeEEEEECCCCCchHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHH
Confidence 56999999999999999999999999999999999865545544433
No 316
>2dzd_A Pyruvate carboxylase; biotin carboxylase, ligase; 2.40A {Geobacillus thermodenitrificans}
Probab=33.49 E-value=44 Score=32.39 Aligned_cols=39 Identities=15% Similarity=0.210 Sum_probs=27.6
Q ss_pred CCCCCccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCcc
Q 011848 1 MEKQDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEH 44 (476)
Q Consensus 1 m~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (476)
|..+.|.||+++.. |. -.+.+++++.+.|++|..+.+..
T Consensus 1 m~~~~~k~ILI~g~---g~--~~~~i~~a~~~~G~~vv~v~~~~ 39 (461)
T 2dzd_A 1 METRRIRKVLVANR---GE--IAIRVFRACTELGIRTVAIYSKE 39 (461)
T ss_dssp --CCCCSEEEECSC---HH--HHHHHHHHHHHHTCEEEEEECGG
T ss_pred CCCCcCcEEEEECC---cH--HHHHHHHHHHHcCCEEEEEECCc
Confidence 77765668888743 32 35778999999999999887643
No 317
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=33.44 E-value=67 Score=27.58 Aligned_cols=39 Identities=13% Similarity=0.221 Sum_probs=28.8
Q ss_pred CccEEEEEcCCCccC----HHHHHHHHHHHHhCCCEEEEEeCc
Q 011848 5 DHVHVAILPLPAVGH----VNSMLNLAELLGHAGIKITFLNTE 43 (476)
Q Consensus 5 ~~~~il~~~~~~~GH----~~p~l~La~~L~~rGH~Vt~~~~~ 43 (476)
+|.+|.+++....+- ..-...|++.|+++|+.|..-...
T Consensus 8 ~m~~V~V~ggsr~~~~~~~~~~A~~lg~~LA~~g~~lV~GGg~ 50 (216)
T 1ydh_A 8 RFRKICVFCGSHSGHREVFSDAAIELGNELVKRKIDLVYGGGS 50 (216)
T ss_dssp SCSEEEEECCSCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCS
T ss_pred CCCeEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEECCCc
Confidence 355799997766542 346788899999999998777654
No 318
>1vhq_A Enhancing lycopene biosynthesis protein 2; structural genomics, unknown function; 1.65A {Escherichia coli} SCOP: c.23.16.2 PDB: 1oy1_A
Probab=33.43 E-value=78 Score=27.26 Aligned_cols=43 Identities=5% Similarity=0.112 Sum_probs=29.9
Q ss_pred CCCCCccEEEEEcC-----CCccCHHHHHHHHHHHHhCCCEEEEEeCcc
Q 011848 1 MEKQDHVHVAILPL-----PAVGHVNSMLNLAELLGHAGIKITFLNTEH 44 (476)
Q Consensus 1 m~~~~~~~il~~~~-----~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (476)
|.-+.|+||+|+.. ++. ...=+....+.|.+.|++|+++++..
T Consensus 1 ~~~~~m~kv~ill~~~~~~~g~-~~~E~~~p~~~l~~ag~~v~~~s~~g 48 (232)
T 1vhq_A 1 MSLITMKKIGVILSGCGVYDGS-EIHEAVLTLLAISRSGAQAVCFAPDK 48 (232)
T ss_dssp -----CCEEEEECCSBSTTTSB-CHHHHHHHHHHHHHTTCEEEEEECSS
T ss_pred CccccCCeEEEEEccCCCCCCe-eHHHHHHHHHHHHHCCCEEEEEecCC
Confidence 33344679999988 544 55556677788999999999999754
No 319
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=33.38 E-value=24 Score=32.69 Aligned_cols=34 Identities=12% Similarity=0.214 Sum_probs=25.8
Q ss_pred CccEEEEEcCCCccCHHHHHHHHHHHHhCCC-EEEEEeCc
Q 011848 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGI-KITFLNTE 43 (476)
Q Consensus 5 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH-~Vt~~~~~ 43 (476)
++|||.++-.|..|.. ||..|+..|| +|+++-..
T Consensus 8 ~~~kI~VIGaG~vG~~-----lA~~la~~g~~~V~L~D~~ 42 (331)
T 1pzg_A 8 RRKKVAMIGSGMIGGT-----MGYLCALRELADVVLYDVV 42 (331)
T ss_dssp CCCEEEEECCSHHHHH-----HHHHHHHHTCCEEEEECSS
T ss_pred CCCEEEEECCCHHHHH-----HHHHHHhCCCCeEEEEECC
Confidence 3579999976555543 8899999999 98888653
No 320
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=33.13 E-value=43 Score=29.99 Aligned_cols=34 Identities=12% Similarity=0.182 Sum_probs=27.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCc
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTE 43 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 43 (476)
.|+++++.++.| =-.++|+.|+++|++|.++.-.
T Consensus 9 ~k~vlVTGas~G---IG~aia~~l~~~G~~V~~~~r~ 42 (285)
T 3sc4_A 9 GKTMFISGGSRG---IGLAIAKRVAADGANVALVAKS 42 (285)
T ss_dssp TCEEEEESCSSH---HHHHHHHHHHTTTCEEEEEESC
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEECC
Confidence 378888888765 3568999999999999988753
No 321
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=32.87 E-value=52 Score=29.11 Aligned_cols=33 Identities=27% Similarity=0.216 Sum_probs=26.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
.|+++++.++.| --.++|+.|+++|++|.++.-
T Consensus 4 ~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~r 36 (264)
T 3tfo_A 4 DKVILITGASGG---IGEGIARELGVAGAKILLGAR 36 (264)
T ss_dssp TCEEEESSTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCccH---HHHHHHHHHHHCCCEEEEEEC
Confidence 478888888764 346899999999999988864
No 322
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=32.82 E-value=45 Score=30.47 Aligned_cols=34 Identities=12% Similarity=0.098 Sum_probs=25.6
Q ss_pred CCccEEEEEcCCCccCHHHHHHHHHHHHhC-C-CEEEEEeCc
Q 011848 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHA-G-IKITFLNTE 43 (476)
Q Consensus 4 ~~~~~il~~~~~~~GH~~p~l~La~~L~~r-G-H~Vt~~~~~ 43 (476)
|.+|||+++..+.. ..|++.|++. | ++|..+...
T Consensus 2 m~~~~Ili~g~g~~------~~l~~~l~~~~~~~~v~~~d~~ 37 (331)
T 2pn1_A 2 MQKPHLLITSAGRR------AKLVEYFVKEFKTGRVSTADCS 37 (331)
T ss_dssp TTCCEEEEESCTTC------HHHHHHHHHHCCSSEEEEEESC
T ss_pred CccceEEEecCCch------HHHHHHHHHhcCCCEEEEEeCC
Confidence 44569999866665 4789999986 7 888887653
No 323
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=32.79 E-value=54 Score=29.37 Aligned_cols=38 Identities=16% Similarity=0.045 Sum_probs=28.3
Q ss_pred cEEEEEcCCCc-cCHH---HHHHHHHHHHhCCCEEEEEeCcc
Q 011848 7 VHVAILPLPAV-GHVN---SMLNLAELLGHAGIKITFLNTEH 44 (476)
Q Consensus 7 ~~il~~~~~~~-GH~~---p~l~La~~L~~rGH~Vt~~~~~~ 44 (476)
+||+++..+.. -|-. ....++++|.++||+|.++....
T Consensus 3 ~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G~~v~~~~~~~ 44 (306)
T 1iow_A 3 DKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPKE 44 (306)
T ss_dssp CEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTTT
T ss_pred cEEEEEeCCCCccceEcHHhHHHHHHHHHHCCCeEEEEecCc
Confidence 58999887643 2322 44679999999999999998753
No 324
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=32.77 E-value=12 Score=33.94 Aligned_cols=32 Identities=28% Similarity=0.285 Sum_probs=27.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCc
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTE 43 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 43 (476)
|||+|+-.|+.|- .+|..|++.||+|+++...
T Consensus 3 mkI~iiGaGa~G~-----~~a~~L~~~g~~V~~~~r~ 34 (294)
T 3g17_A 3 LSVAIIGPGAVGT-----TIAYELQQSLPHTTLIGRH 34 (294)
T ss_dssp CCEEEECCSHHHH-----HHHHHHHHHCTTCEEEESS
T ss_pred cEEEEECCCHHHH-----HHHHHHHHCCCeEEEEEec
Confidence 5999999888875 5788899999999999864
No 325
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=32.75 E-value=31 Score=31.42 Aligned_cols=33 Identities=12% Similarity=0.195 Sum_probs=22.7
Q ss_pred ccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 6 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
||+|++.- +.|.+ -..|++.|.++||+|+.+..
T Consensus 1 M~~ilVtG--atG~i--G~~l~~~L~~~g~~V~~~~r 33 (330)
T 2c20_A 1 MNSILICG--GAGYI--GSHAVKKLVDEGLSVVVVDN 33 (330)
T ss_dssp -CEEEEET--TTSHH--HHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEEC--CCcHH--HHHHHHHHHhCCCEEEEEeC
Confidence 45766552 33322 46789999999999999874
No 326
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=32.74 E-value=38 Score=33.20 Aligned_cols=34 Identities=18% Similarity=0.218 Sum_probs=27.3
Q ss_pred CCccEEEEEcCCCccCHHHHHHHHHHHHhC--CCEEEEEeC
Q 011848 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHA--GIKITFLNT 42 (476)
Q Consensus 4 ~~~~~il~~~~~~~GH~~p~l~La~~L~~r--GH~Vt~~~~ 42 (476)
+.||||.|+-.|..| +.+|..|+++ ||+|+++..
T Consensus 7 ~~~mkI~VIG~G~vG-----~~~A~~La~~g~g~~V~~~D~ 42 (481)
T 2o3j_A 7 GKVSKVVCVGAGYVG-----GPTCAMIAHKCPHITVTVVDM 42 (481)
T ss_dssp CCCCEEEEECCSTTH-----HHHHHHHHHHCTTSEEEEECS
T ss_pred CCCCEEEEECCCHHH-----HHHHHHHHhcCCCCEEEEEEC
Confidence 446899999888776 4678888888 799999864
No 327
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=32.67 E-value=38 Score=29.60 Aligned_cols=33 Identities=18% Similarity=0.060 Sum_probs=25.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
||+++++.++.|= -.++++.|+++|++|.++.-
T Consensus 1 Mk~vlVTGas~gI---G~~ia~~l~~~G~~V~~~~r 33 (254)
T 1zmt_A 1 MSTAIVTNVKHFG---GMGSALRLSEAGHTVACHDE 33 (254)
T ss_dssp -CEEEESSTTSTT---HHHHHHHHHHTTCEEEECCG
T ss_pred CeEEEEeCCCchH---HHHHHHHHHHCCCEEEEEeC
Confidence 4677888776542 46899999999999988754
No 328
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=32.63 E-value=51 Score=30.84 Aligned_cols=35 Identities=20% Similarity=0.300 Sum_probs=24.4
Q ss_pred CccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCc
Q 011848 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTE 43 (476)
Q Consensus 5 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 43 (476)
.||+|++. |+.|.+ -..|++.|.++||+|+.+.-.
T Consensus 28 ~~~~vlVt--GatG~i--G~~l~~~L~~~g~~V~~~~r~ 62 (379)
T 2c5a_A 28 ENLKISIT--GAGGFI--ASHIARRLKHEGHYVIASDWK 62 (379)
T ss_dssp SCCEEEEE--TTTSHH--HHHHHHHHHHTTCEEEEEESS
T ss_pred cCCeEEEE--CCccHH--HHHHHHHHHHCCCeEEEEECC
Confidence 35676655 333433 467889999999999988753
No 329
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=32.53 E-value=19 Score=35.35 Aligned_cols=31 Identities=29% Similarity=0.297 Sum_probs=24.8
Q ss_pred ccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEe
Q 011848 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLN 41 (476)
Q Consensus 6 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~ 41 (476)
|.||+|+-.|--| |.-|..|+++||+|+++-
T Consensus 1 Mk~VvVIGaG~~G-----L~aA~~La~~G~~V~VlE 31 (501)
T 4dgk_A 1 MKPTTVIGAGFGG-----LALAIRLQAAGIPVLLLE 31 (501)
T ss_dssp CCCEEEECCHHHH-----HHHHHHHHHTTCCEEEEC
T ss_pred CCCEEEECCcHHH-----HHHHHHHHHCCCcEEEEc
Confidence 4588888666444 778899999999999985
No 330
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=32.52 E-value=57 Score=28.25 Aligned_cols=32 Identities=13% Similarity=0.284 Sum_probs=25.0
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 8 ~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
|.++++.++.| --.++++.|+++|++|.++.-
T Consensus 12 k~vlITGasgg---iG~~la~~l~~~G~~V~~~~r 43 (254)
T 2wsb_A 12 ACAAVTGAGSG---IGLEICRAFAASGARLILIDR 43 (254)
T ss_dssp CEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 66777766543 356899999999999998875
No 331
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=32.39 E-value=60 Score=28.22 Aligned_cols=33 Identities=30% Similarity=0.264 Sum_probs=27.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
.|+++++.++.| --.++|+.|+++|++|.+...
T Consensus 9 gk~~lVTGas~g---IG~a~a~~l~~~G~~V~~~~r 41 (248)
T 3op4_A 9 GKVALVTGASRG---IGKAIAELLAERGAKVIGTAT 41 (248)
T ss_dssp TCEEEESSCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 388889888764 357899999999999988765
No 332
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=32.37 E-value=60 Score=28.51 Aligned_cols=32 Identities=13% Similarity=0.199 Sum_probs=26.4
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 8 ~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
|+++++.++.| =-.++|+.|+++|++|.++.-
T Consensus 11 k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r 42 (262)
T 3pk0_A 11 RSVVVTGGTKG---IGRGIATVFARAGANVAVAGR 42 (262)
T ss_dssp CEEEETTCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 78888888764 356889999999999998864
No 333
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=32.36 E-value=27 Score=30.79 Aligned_cols=30 Identities=20% Similarity=0.310 Sum_probs=24.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEe
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLN 41 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~ 41 (476)
|||.|+-.|..|. .+|+.|++.||+|++..
T Consensus 1 M~I~iIG~G~mG~-----~la~~l~~~g~~V~~~~ 30 (264)
T 1i36_A 1 LRVGFIGFGEVAQ-----TLASRLRSRGVEVVTSL 30 (264)
T ss_dssp CEEEEESCSHHHH-----HHHHHHHHTTCEEEECC
T ss_pred CeEEEEechHHHH-----HHHHHHHHCCCeEEEeC
Confidence 4899997777764 57899999999999854
No 334
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=32.27 E-value=2.1e+02 Score=23.46 Aligned_cols=140 Identities=9% Similarity=0.066 Sum_probs=75.8
Q ss_pred CCceEEEEecccccCCHHHHHHHHHHHhhCCCcEEEEEcCCCCCCCCCCCCCchHHHHHhcCCceeeeccCHHHHhCcCC
Q 011848 282 KQSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSA 361 (476)
Q Consensus 282 ~~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~vp~~~ll~~~~ 361 (476)
.++.|-|-+||.. +-...++....++..+..+-..+- +...+|+.+.+ |+-... -...+
T Consensus 6 ~~~~V~IimgS~S--D~~v~~~a~~~L~~~gi~~ev~V~--------SaHR~p~~~~~----------~~~~a~-~~g~~ 64 (174)
T 3lp6_A 6 ERPRVGVIMGSDS--DWPVMADAAAALAEFDIPAEVRVV--------SAHRTPEAMFS----------YARGAA-ARGLE 64 (174)
T ss_dssp CCCSEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEEC--------CTTTCHHHHHH----------HHHHHH-HHTCC
T ss_pred CCCeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEE--------CCCCCHHHHHH----------HHHHHH-hCCCC
Confidence 4566777788775 566677888888888887655552 22245554432 110000 01233
Q ss_pred CCccccccCh----hHHHHHHHhCCceeccccccchh--hhhH--hhhcceee--eEEe-ccccCHHHHHHHHHHHHhHh
Q 011848 362 VGGFLTHCGW----NSTLESIVAGMPMICWPSFADQQ--INSR--FVGEVWKL--GLDI-KDLCDRNIVEKAVNDLMVER 430 (476)
Q Consensus 362 ~~~~I~HgG~----gs~~eal~~GvP~l~~P~~~DQ~--~na~--r~~e~~G~--g~~~-~~~~~~~~l~~ai~~~l~~~ 430 (476)
+ +|.=+|. .++.-+ ..-.|++.+|...-.. ..+- .++-=.|+ +... +.-.++..++..|..+ .|
T Consensus 65 V--iIa~AG~aa~LpgvvA~-~t~~PVIgVP~~~~~l~G~daLlS~vqmp~GvpVatV~I~~~~nAa~lAa~Il~~-~d- 139 (174)
T 3lp6_A 65 V--IIAGAGGAAHLPGMVAA-ATPLPVIGVPVPLGRLDGLDSLLSIVQMPAGVPVATVSIGGAGNAGLLAVRMLGA-AN- 139 (174)
T ss_dssp E--EEEEEESSCCHHHHHHH-HCSSCEEEEEECCSSGGGHHHHHHHHCCCTTCCCEECCTTCHHHHHHHHHHHHHT-TC-
T ss_pred E--EEEecCchhhhHHHHHh-ccCCCEEEeeCCCCCCCCHHHHHHHhhCCCCCeeEEEEcCcchHHHHHHHHHHhC-CC-
Confidence 3 6655543 344433 3578999999753211 1111 11111243 3222 2445666665555444 35
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 011848 431 KEEFMESADRMANLAKKS 448 (476)
Q Consensus 431 ~~~~~~~a~~l~~~~~~~ 448 (476)
+.++++.+.++++.++.
T Consensus 140 -~~l~~kl~~~r~~~~~~ 156 (174)
T 3lp6_A 140 -PQLRARIVAFQDRLADV 156 (174)
T ss_dssp -HHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHH
Confidence 88999998888888775
No 335
>1sqs_A Conserved hypothetical protein; structural genomics, alpha beta protein, PSI, protein struct initiative; HET: TLA; 1.50A {Streptococcus pneumoniae} SCOP: c.23.5.5 PDB: 2oys_A*
Probab=32.27 E-value=44 Score=29.10 Aligned_cols=37 Identities=11% Similarity=0.147 Sum_probs=25.8
Q ss_pred ccEEEEEcCCCc--cCHHHHHH-HHHHHHhC-CCEEEEEeC
Q 011848 6 HVHVAILPLPAV--GHVNSMLN-LAELLGHA-GIKITFLNT 42 (476)
Q Consensus 6 ~~~il~~~~~~~--GH~~p~l~-La~~L~~r-GH~Vt~~~~ 42 (476)
||||+++..... |+..-+.. +++.|.++ |++|.++..
T Consensus 1 MmkIliI~gS~r~~s~T~~la~~i~~~l~~~~g~~v~~~dl 41 (242)
T 1sqs_A 1 MNKIFIYAGVRNHNSKTLEYTKRLSSIISSRNNVDISFRTP 41 (242)
T ss_dssp CCEEEEEECCCCTTCHHHHHHHHHHHHHHHHSCCEEEEECT
T ss_pred CCeEEEEECCCCCCChHHHHHHHHHHHHHHhcCCeEEEEEc
Confidence 568888776654 66665544 46677777 999988854
No 336
>3d7n_A Flavodoxin, WRBA-like protein; structural genomics, PSI, MCS protein structure initiative, midwest center for structural genomics; 2.30A {Agrobacterium tumefaciens}
Probab=32.23 E-value=15 Score=30.83 Aligned_cols=37 Identities=19% Similarity=0.192 Sum_probs=21.2
Q ss_pred CCCCCccEEEEEcCCCccCHHHHHH-HHHHHHhCCCEE
Q 011848 1 MEKQDHVHVAILPLPAVGHVNSMLN-LAELLGHAGIKI 37 (476)
Q Consensus 1 m~~~~~~~il~~~~~~~GH~~p~l~-La~~L~~rGH~V 37 (476)
|.+++||||+++-+...||..-+.. +++.|.+.|++|
T Consensus 1 ~~~~~~~kiliiy~S~~GnT~~lA~~ia~~l~~~~~~v 38 (193)
T 3d7n_A 1 MTTNSSSNTVVVYHSGYGHTHRMAEAVAEGAEATLHAI 38 (193)
T ss_dssp -----CCCEEEEECCSSSHHHHHHHHHHHHHTCEEEEC
T ss_pred CCCCCCCEEEEEEECCChHHHHHHHHHHHHhhhcceEe
Confidence 6777889999988888898765443 345554444444
No 337
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=32.23 E-value=2.4e+02 Score=25.94 Aligned_cols=123 Identities=14% Similarity=0.141 Sum_probs=62.5
Q ss_pred ceEEEEecccccCCHHHHHHHHHHHhhC-CCcEEEEEcCCCCCCCCCCCCCchHHHHHhcCCceeeeccCHHHHhCcCCC
Q 011848 284 SVIYVSFGSIAVMSRDQLIEFYYGLVHS-KKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAV 362 (476)
Q Consensus 284 ~~V~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~vp~~~ll~~~~~ 362 (476)
++.+|.+|.+. ...+.++... +..++.++.. .++........++ .-+-...++|...++
T Consensus 7 ~vgiiG~G~~g-------~~~~~~l~~~~~~~l~av~d~-----------~~~~~~~a~~~g~--~~~~~~~~ll~~~~~ 66 (359)
T 3e18_A 7 QLVIVGYGGMG-------SYHVTLASAADNLEVHGVFDI-----------LAEKREAAAQKGL--KIYESYEAVLADEKV 66 (359)
T ss_dssp EEEEECCSHHH-------HHHHHHHHTSTTEEEEEEECS-----------SHHHHHHHHTTTC--CBCSCHHHHHHCTTC
T ss_pred cEEEECcCHHH-------HHHHHHHHhCCCcEEEEEEcC-----------CHHHHHHHHhcCC--ceeCCHHHHhcCCCC
Confidence 46778888765 2334455555 4555555532 1222111111222 234556778875555
Q ss_pred CccccccChh----HHHHHHHhCCceec-cccc--cchhhhhHhhhcceeeeEEec--cccCHHHHHHHHHHHHh
Q 011848 363 GGFLTHCGWN----STLESIVAGMPMIC-WPSF--ADQQINSRFVGEVWKLGLDIK--DLCDRNIVEKAVNDLMV 428 (476)
Q Consensus 363 ~~~I~HgG~g----s~~eal~~GvP~l~-~P~~--~DQ~~na~r~~e~~G~g~~~~--~~~~~~~l~~ai~~~l~ 428 (476)
.+++--.-.. -+.+|+.+|+++++ -|+. .++-.-...++++.|+-+.+. .++.+. ...+++++.
T Consensus 67 D~V~i~tp~~~h~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~~r~~p~--~~~~k~~i~ 139 (359)
T 3e18_A 67 DAVLIATPNDSHKELAISALEAGKHVVCEKPVTMTSEDLLAIMDVAKRVNKHFMVHQNRRWDED--FLIIKEMFE 139 (359)
T ss_dssp CEEEECSCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHHHHHTCCEEEECGGGGCHH--HHHHHHHHH
T ss_pred CEEEEcCCcHHHHHHHHHHHHCCCCEEeeCCCcCCHHHHHHHHHHHHHhCCeEEEEeeeccCHH--HHHHHHHHH
Confidence 5565443333 46778889998877 3543 334443333334556655554 244433 334455544
No 338
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=31.99 E-value=33 Score=30.93 Aligned_cols=32 Identities=16% Similarity=0.105 Sum_probs=26.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCc
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTE 43 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 43 (476)
.+|+++-.|..| +..|..|+++||+|+++-..
T Consensus 16 ~~vvIIG~G~aG-----l~aA~~l~~~g~~v~lie~~ 47 (323)
T 3f8d_A 16 FDVIIVGLGPAA-----YGAALYSARYMLKTLVIGET 47 (323)
T ss_dssp EEEEEECCSHHH-----HHHHHHHHHTTCCEEEEESS
T ss_pred cCEEEECccHHH-----HHHHHHHHHCCCcEEEEecc
Confidence 488888877665 78899999999999999863
No 339
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=31.96 E-value=15 Score=32.46 Aligned_cols=34 Identities=15% Similarity=0.348 Sum_probs=26.5
Q ss_pred CCccEEEEEcCCCccCHHHHHHHHHHHHhCC----CEEEEEeC
Q 011848 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHAG----IKITFLNT 42 (476)
Q Consensus 4 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rG----H~Vt~~~~ 42 (476)
|.+|||.|+-.|..|.. +|..|+++| |+|+++..
T Consensus 2 m~~m~i~iiG~G~mG~~-----~a~~l~~~g~~~~~~v~~~~~ 39 (262)
T 2rcy_A 2 MENIKLGFMGLGQMGSA-----LAHGIANANIIKKENLFYYGP 39 (262)
T ss_dssp CSSSCEEEECCSHHHHH-----HHHHHHHHTSSCGGGEEEECS
T ss_pred CCCCEEEEECcCHHHHH-----HHHHHHHCCCCCCCeEEEEeC
Confidence 34579999988877754 778888899 89988754
No 340
>2vzf_A NADH-dependent FMN reductase; oxidoreductase; 2.50A {Edta-degrading bacterium BNC1} PDB: 2vzh_A* 2vzj_A*
Probab=31.95 E-value=47 Score=27.80 Aligned_cols=38 Identities=3% Similarity=-0.009 Sum_probs=26.8
Q ss_pred ccEEEEEcCCC--ccCHHHHHH-HHHH-HHhCCCEEEEEeCc
Q 011848 6 HVHVAILPLPA--VGHVNSMLN-LAEL-LGHAGIKITFLNTE 43 (476)
Q Consensus 6 ~~~il~~~~~~--~GH~~p~l~-La~~-L~~rGH~Vt~~~~~ 43 (476)
||||+++.... .|+..-+.. +++. |.++|++|.++...
T Consensus 2 Mmkilii~gS~r~~g~t~~la~~i~~~~l~~~g~~v~~~dl~ 43 (197)
T 2vzf_A 2 TYSIVAISGSPSRNSTTAKLAEYALAHVLARSDSQGRHIHVI 43 (197)
T ss_dssp CEEEEEEECCSSTTCHHHHHHHHHHHHHHHHSSEEEEEEEGG
T ss_pred CceEEEEECCCCCCChHHHHHHHHHHHHHHHCCCeEEEEEcc
Confidence 57888877654 476666555 4566 78889999988753
No 341
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=31.93 E-value=37 Score=30.56 Aligned_cols=32 Identities=19% Similarity=0.348 Sum_probs=26.1
Q ss_pred ccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 6 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
+|||+|+-.|..|. .+++.|.+.||+|+++..
T Consensus 4 ~~~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~~ 35 (301)
T 3cky_A 4 SIKIGFIGLGAMGK-----PMAINLLKEGVTVYAFDL 35 (301)
T ss_dssp CCEEEEECCCTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCEEEEECccHHHH-----HHHHHHHHCCCeEEEEeC
Confidence 57999998888875 468889999999987654
No 342
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=31.91 E-value=66 Score=28.60 Aligned_cols=34 Identities=15% Similarity=0.230 Sum_probs=26.0
Q ss_pred EEEEEcCCCc-cCHHHHHHHHHHHHhCCCEEEEEeCc
Q 011848 8 HVAILPLPAV-GHVNSMLNLAELLGHAGIKITFLNTE 43 (476)
Q Consensus 8 ~il~~~~~~~-GH~~p~l~La~~L~~rGH~Vt~~~~~ 43 (476)
|+++++.++. |-+ -.++++.|+++|++|+++.-.
T Consensus 22 k~vlVTGas~~~gI--G~~ia~~l~~~G~~V~~~~r~ 56 (285)
T 2p91_A 22 KRALITGVANERSI--AYGIAKSFHREGAQLAFTYAT 56 (285)
T ss_dssp CEEEECCCSSTTSH--HHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCCCCcH--HHHHHHHHHHcCCEEEEEeCC
Confidence 6788888762 333 468999999999999988753
No 343
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=31.90 E-value=35 Score=30.69 Aligned_cols=34 Identities=18% Similarity=0.069 Sum_probs=24.0
Q ss_pred ccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCc
Q 011848 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTE 43 (476)
Q Consensus 6 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 43 (476)
|++|++. |+.|.+ -..|+++|.++||+|+.++-.
T Consensus 2 ~~~vlVt--GatG~i--G~~l~~~L~~~g~~V~~~~R~ 35 (307)
T 2gas_A 2 ENKILIL--GPTGAI--GRHIVWASIKAGNPTYALVRK 35 (307)
T ss_dssp CCCEEEE--STTSTT--HHHHHHHHHHHTCCEEEEECC
T ss_pred CcEEEEE--CCCchH--HHHHHHHHHhCCCcEEEEECC
Confidence 4566665 444444 356789999999999988754
No 344
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=31.89 E-value=57 Score=29.04 Aligned_cols=32 Identities=25% Similarity=0.299 Sum_probs=26.3
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 8 ~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
|+++++.++.| --.++|++|+++|++|.++..
T Consensus 30 k~vlVTGas~g---IG~aia~~la~~G~~V~~~~r 61 (277)
T 3gvc_A 30 KVAIVTGAGAG---IGLAVARRLADEGCHVLCADI 61 (277)
T ss_dssp CEEEETTTTST---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 78888887764 346889999999999988875
No 345
>2hna_A Protein MIOC, flavodoxin; alpha-beta sandwich, flavodoxin fold, electron transport; NMR {Escherichia coli} PDB: 2hnb_A
Probab=31.86 E-value=53 Score=25.83 Aligned_cols=36 Identities=22% Similarity=0.309 Sum_probs=28.2
Q ss_pred ccEEEEEcCCCccCHHH-HHHHHHHHHhCCCEEEEEe
Q 011848 6 HVHVAILPLPAVGHVNS-MLNLAELLGHAGIKITFLN 41 (476)
Q Consensus 6 ~~~il~~~~~~~GH~~p-~l~La~~L~~rGH~Vt~~~ 41 (476)
|+||+++=...+|+..- .-.|++.|.++|++|.++.
T Consensus 1 M~ki~I~Y~S~tGnT~~~A~~ia~~l~~~g~~v~~~~ 37 (147)
T 2hna_A 1 MADITLISGSTLGGAEYVAEHLAEKLEEAGFTTETLH 37 (147)
T ss_dssp CCSEEEECCTTSCCCHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCeEEEEEECCchHHHHHHHHHHHHHHHCCCceEEec
Confidence 45788877777898876 4567888999999998764
No 346
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=31.84 E-value=25 Score=32.34 Aligned_cols=31 Identities=29% Similarity=0.328 Sum_probs=25.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
|||+|+-.|..|. .+|..|+++||+|+++..
T Consensus 1 m~I~iiG~G~mG~-----~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 1 MIVSILGAGAMGS-----ALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp CEEEEESCCHHHH-----HHHHHHHHHCCEEEEECC
T ss_pred CEEEEECcCHHHH-----HHHHHHHhCCCeEEEEEc
Confidence 4899998877774 568899999999999876
No 347
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=31.82 E-value=58 Score=28.92 Aligned_cols=32 Identities=25% Similarity=0.400 Sum_probs=25.4
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 8 ~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
|+++++.++.| --.++++.|+++|++|.++.-
T Consensus 23 k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r 54 (277)
T 2rhc_B 23 EVALVTGATSG---IGLEIARRLGKEGLRVFVCAR 54 (277)
T ss_dssp CEEEEETCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 67788877653 356889999999999998865
No 348
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=31.69 E-value=16 Score=33.35 Aligned_cols=35 Identities=17% Similarity=0.128 Sum_probs=28.0
Q ss_pred CccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCcc
Q 011848 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEH 44 (476)
Q Consensus 5 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (476)
.+.+|+++-.|..| +..|..|+++|++|+++-...
T Consensus 6 ~~~~vvIIG~G~aG-----l~aA~~l~~~g~~v~lie~~~ 40 (332)
T 3lzw_A 6 KVYDITIIGGGPVG-----LFTAFYGGMRQASVKIIESLP 40 (332)
T ss_dssp EEEEEEEECCSHHH-----HHHHHHHHHTTCCEEEECSSS
T ss_pred ccceEEEECCCHHH-----HHHHHHHHHCCCCEEEEEcCC
Confidence 34588888877555 788999999999999998643
No 349
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=31.63 E-value=1.8e+02 Score=26.76 Aligned_cols=127 Identities=18% Similarity=0.162 Sum_probs=0.0
Q ss_pred ceEEEEecccccCCHHHHHHHHHHHhhC--CCcEEEEEcCCCCCCCCCCCCCchHHHHHhcCCceeeeccCHHHHhCcCC
Q 011848 284 SVIYVSFGSIAVMSRDQLIEFYYGLVHS--KKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSA 361 (476)
Q Consensus 284 ~~V~vs~Gs~~~~~~~~~~~~~~al~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~vp~~~ll~~~~ 361 (476)
++.+|.+|.+. ...+.++.+. +..++.++ .....-.+...+..-+.-+-...++|...+
T Consensus 15 rvgiiG~G~~g-------~~~~~~l~~~~~~~~lvav~------------d~~~~~~~~~~~~~~~~~~~~~~~ll~~~~ 75 (354)
T 3q2i_A 15 RFALVGCGRIA-------NNHFGALEKHADRAELIDVC------------DIDPAALKAAVERTGARGHASLTDMLAQTD 75 (354)
T ss_dssp EEEEECCSTTH-------HHHHHHHHHTTTTEEEEEEE------------CSSHHHHHHHHHHHCCEEESCHHHHHHHCC
T ss_pred eEEEEcCcHHH-------HHHHHHHHhCCCCeEEEEEE------------cCCHHHHHHHHHHcCCceeCCHHHHhcCCC
Q ss_pred CCccccccChhH----HHHHHHhCCceec---cccccchhhhhHhhhcceeeeEEeccccCHHHHHHHHHHHHhH
Q 011848 362 VGGFLTHCGWNS----TLESIVAGMPMIC---WPSFADQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMVE 429 (476)
Q Consensus 362 ~~~~I~HgG~gs----~~eal~~GvP~l~---~P~~~DQ~~na~r~~e~~G~g~~~~~~~~~~~l~~ai~~~l~~ 429 (476)
+.+++----... +.+|+.+|+++++ +-...++-.-...++++.|+-+.+.....-....+.+++++.+
T Consensus 76 ~D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~a~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~ 150 (354)
T 3q2i_A 76 ADIVILTTPSGLHPTQSIECSEAGFHVMTEKPMATRWEDGLEMVKAADKAKKHLFVVKQNRRNATLQLLKRAMQE 150 (354)
T ss_dssp CSEEEECSCGGGHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECCGGGGSHHHHHHHHHHHT
T ss_pred CCEEEECCCcHHHHHHHHHHHHCCCCEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEEEcccCCHHHHHHHHHHhc
No 350
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=31.56 E-value=42 Score=31.20 Aligned_cols=34 Identities=15% Similarity=0.173 Sum_probs=23.7
Q ss_pred ccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCc
Q 011848 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTE 43 (476)
Q Consensus 6 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 43 (476)
+++|++. |+.|.+ -..|++.|.++||+|+.++-.
T Consensus 5 ~~~ilVt--GatG~i--G~~l~~~L~~~g~~V~~~~R~ 38 (352)
T 1xgk_A 5 KKTIAVV--GATGRQ--GASLIRVAAAVGHHVRAQVHS 38 (352)
T ss_dssp CCCEEEE--STTSHH--HHHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEEE--CCCCHH--HHHHHHHHHhCCCEEEEEECC
Confidence 4466654 444444 356889999999999998753
No 351
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=31.53 E-value=44 Score=30.74 Aligned_cols=34 Identities=21% Similarity=0.069 Sum_probs=24.4
Q ss_pred CccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 5 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
.+++|++. |+.|.+ -..|++.|.++||+|+.+.-
T Consensus 24 ~~~~vlVt--GatG~i--G~~l~~~L~~~g~~V~~~~r 57 (351)
T 3ruf_A 24 SPKTWLIT--GVAGFI--GSNLLEKLLKLNQVVIGLDN 57 (351)
T ss_dssp SCCEEEEE--TTTSHH--HHHHHHHHHHTTCEEEEEEC
T ss_pred CCCeEEEE--CCCcHH--HHHHHHHHHHCCCEEEEEeC
Confidence 34566654 344443 46789999999999999875
No 352
>2z04_A Phosphoribosylaminoimidazole carboxylase ATPase subunit; purine nucleotide biosynthetic pathway, structural genomics, NPPSFA; 2.35A {Aquifex aeolicus}
Probab=31.51 E-value=50 Score=30.74 Aligned_cols=34 Identities=18% Similarity=0.013 Sum_probs=26.3
Q ss_pred ccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCcc
Q 011848 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEH 44 (476)
Q Consensus 6 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (476)
|.||+++..+ .-...+++++.++||+|.++.+..
T Consensus 1 M~~Ililg~g-----~~~~~~~~a~~~~G~~v~~~~~~~ 34 (365)
T 2z04_A 1 MLTVGILGGG-----QLGWMTILEGRKLGFKFHVLEDKE 34 (365)
T ss_dssp -CEEEEECCS-----HHHHHHHHHHGGGTCEEEEECSSS
T ss_pred CCEEEEECCC-----HHHHHHHHHHHHCCCEEEEEeCCC
Confidence 4589988654 446788999999999999988643
No 353
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=31.51 E-value=26 Score=31.31 Aligned_cols=31 Identities=26% Similarity=0.253 Sum_probs=24.9
Q ss_pred ccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 6 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
||||+|+-.|..|. .+++.|.+ ||+|+++..
T Consensus 1 M~~i~iiG~G~~G~-----~~a~~l~~-g~~V~~~~~ 31 (289)
T 2cvz_A 1 MEKVAFIGLGAMGY-----PMAGHLAR-RFPTLVWNR 31 (289)
T ss_dssp -CCEEEECCSTTHH-----HHHHHHHT-TSCEEEECS
T ss_pred CCeEEEEcccHHHH-----HHHHHHhC-CCeEEEEeC
Confidence 56999998888875 46888999 999988764
No 354
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=31.48 E-value=2.1e+02 Score=23.24 Aligned_cols=143 Identities=8% Similarity=0.080 Sum_probs=77.5
Q ss_pred ceEEEEecccccCCHHHHHHHHHHHhhCCCcEEEEEcCCCCCCCCCCCCCchHHHHHhcCCceeeeccCHHHHhCcCCCC
Q 011848 284 SVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAVG 363 (476)
Q Consensus 284 ~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~vp~~~ll~~~~~~ 363 (476)
|.|-|-+||.. +-...++....++..+..+-..+- +....|+.+.+ |+.. +....++
T Consensus 6 p~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~--------SaHRtp~~l~~----------~~~~---~~~~g~~ 62 (166)
T 3oow_A 6 VQVGVIMGSKS--DWSTMKECCDILDNLGIGYECEVV--------SAHRTPDKMFD----------YAET---AKERGLK 62 (166)
T ss_dssp EEEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEEC--------CTTTCHHHHHH----------HHHH---TTTTTCC
T ss_pred CeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEE--------cCcCCHHHHHH----------HHHH---HHhCCCc
Confidence 55777788775 566677888888888876655552 22245554432 1110 1111223
Q ss_pred ccccccChh----HHHHHHHhCCceeccccccchh--hhhH--hhhcceeeeE--Eecc---ccCHHHHHHHHHHHHhHh
Q 011848 364 GFLTHCGWN----STLESIVAGMPMICWPSFADQQ--INSR--FVGEVWKLGL--DIKD---LCDRNIVEKAVNDLMVER 430 (476)
Q Consensus 364 ~~I~HgG~g----s~~eal~~GvP~l~~P~~~DQ~--~na~--r~~e~~G~g~--~~~~---~~~~~~l~~ai~~~l~~~ 430 (476)
.+|.=+|.- ++.-+ ..-+|++.+|...-.. ..+- .++-=.|+++ ..-. -+++..++..|..+ .|
T Consensus 63 ViIa~AG~aa~LpgvvA~-~t~~PVIgVP~~~~~l~G~dsLlS~vqmp~gvpVatV~I~~ag~~nAa~lAa~Il~~-~d- 139 (166)
T 3oow_A 63 VIIAGAGGAAHLPGMVAA-KTTLPVLGVPVKSSTLNGQDSLLSIVQMPAGIPVATFAIGMAGAKNAALFAASILQH-TD- 139 (166)
T ss_dssp EEEEEECSSCCHHHHHHH-TCSSCEEEEECCCTTTTTHHHHHHHHTCCTTSCCEECCSTHHHHHHHHHHHHHHHGG-GC-
T ss_pred EEEEECCcchhhHHHHHh-ccCCCEEEeecCcCCCCCHHHHHHHhcCCCCCceEEEecCCccchHHHHHHHHHHcC-CC-
Confidence 377655533 33333 3468999999743211 0111 1111124333 2212 44555555554443 36
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCC
Q 011848 431 KEEFMESADRMANLAKKSVNKGG 453 (476)
Q Consensus 431 ~~~~~~~a~~l~~~~~~~~~~~g 453 (476)
+.++++.+.++++.++.+....
T Consensus 140 -~~l~~kl~~~r~~~~~~v~~~~ 161 (166)
T 3oow_A 140 -INIAKALAEFRAEQTRFVLENP 161 (166)
T ss_dssp -HHHHHHHHHHHHHHHHHHHTCC
T ss_pred -HHHHHHHHHHHHHHHHHHHhcc
Confidence 8999999999999888765443
No 355
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=31.48 E-value=60 Score=27.86 Aligned_cols=36 Identities=14% Similarity=-0.005 Sum_probs=24.3
Q ss_pred CCccEEEEEcCCCccCHHHHHHHHHHHHhC--CCEEEEEeCc
Q 011848 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHA--GIKITFLNTE 43 (476)
Q Consensus 4 ~~~~~il~~~~~~~GH~~p~l~La~~L~~r--GH~Vt~~~~~ 43 (476)
+.|++|++. |+.|. --..|++.|.++ ||+|+.+.-.
T Consensus 2 ~~~~~ilVt--GasG~--iG~~l~~~l~~~~~g~~V~~~~r~ 39 (253)
T 1xq6_A 2 ANLPTVLVT--GASGR--TGQIVYKKLKEGSDKFVAKGLVRS 39 (253)
T ss_dssp CSCCEEEEE--STTSH--HHHHHHHHHHHTTTTCEEEEEESC
T ss_pred CCCCEEEEE--cCCcH--HHHHHHHHHHhcCCCcEEEEEEcC
Confidence 445566554 33332 356789999999 8999998753
No 356
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=31.44 E-value=1.5e+02 Score=25.78 Aligned_cols=37 Identities=11% Similarity=0.139 Sum_probs=25.4
Q ss_pred cEEEEEcCCCccCH-HHHHHHHHHHHhCCCEEEEEeCc
Q 011848 7 VHVAILPLPAVGHV-NSMLNLAELLGHAGIKITFLNTE 43 (476)
Q Consensus 7 ~~il~~~~~~~GH~-~p~l~La~~L~~rGH~Vt~~~~~ 43 (476)
|||+++-.-+.-++ ..+...++.++.-|.+|.+.+.+
T Consensus 2 mrilvINPnts~~~T~~i~~~~~~~~~p~~~i~~~t~~ 39 (245)
T 3qvl_A 2 VRIQVINPNTSLAMTETIGAAARAVAAPGTEILAVCPR 39 (245)
T ss_dssp EEEEEECSSCCHHHHHHHHHHHHHHCCTTEEEEEECCS
T ss_pred CEEEEEeCCCCHHHHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 47877766665555 45666777777668888877764
No 357
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=31.28 E-value=55 Score=28.43 Aligned_cols=38 Identities=18% Similarity=0.163 Sum_probs=28.1
Q ss_pred CCCCCccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 1 MEKQDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 1 m~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
|+.++ .|+++++.++.| --.++++.|+++|++|.+...
T Consensus 1 ~~~l~-gk~vlVTGas~g---IG~a~a~~l~~~G~~V~~~~r 38 (247)
T 3rwb_A 1 TERLA-GKTALVTGAAQG---IGKAIAARLAADGATVIVSDI 38 (247)
T ss_dssp CCTTT-TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEECS
T ss_pred CCCcC-CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 34443 377888887764 346899999999999988764
No 358
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=31.28 E-value=65 Score=30.14 Aligned_cols=33 Identities=9% Similarity=0.012 Sum_probs=25.9
Q ss_pred ccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCc
Q 011848 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTE 43 (476)
Q Consensus 6 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 43 (476)
|.||+++..+ .....++++|.+.||+|.++.+.
T Consensus 1 M~~Ililg~g-----~~g~~~~~a~~~~G~~v~~~~~~ 33 (380)
T 3ax6_A 1 MKKIGIIGGG-----QLGKMMTLEAKKMGFYVIVLDPT 33 (380)
T ss_dssp CCEEEEECCS-----HHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCC-----HHHHHHHHHHHHCCCEEEEEeCC
Confidence 3589998765 24567888899999999998874
No 359
>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}
Probab=31.26 E-value=35 Score=29.11 Aligned_cols=33 Identities=15% Similarity=0.040 Sum_probs=26.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
.|+++++.++.| --.+++++|+++|++|.+..-
T Consensus 6 ~k~vlVTGas~g---IG~~~a~~l~~~G~~V~~~~r 38 (223)
T 3uce_A 6 KTVYVVLGGTSG---IGAELAKQLESEHTIVHVASR 38 (223)
T ss_dssp CEEEEEETTTSH---HHHHHHHHHCSTTEEEEEESG
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEecC
Confidence 378888887764 457889999999999988764
No 360
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=31.26 E-value=59 Score=27.80 Aligned_cols=35 Identities=17% Similarity=0.147 Sum_probs=23.8
Q ss_pred CccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCc
Q 011848 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTE 43 (476)
Q Consensus 5 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 43 (476)
+.++|++. |+.|. --..|+++|+++||+|+.++-.
T Consensus 20 ~~~~ilVt--GatG~--iG~~l~~~L~~~G~~V~~~~R~ 54 (236)
T 3e8x_A 20 QGMRVLVV--GANGK--VARYLLSELKNKGHEPVAMVRN 54 (236)
T ss_dssp -CCEEEEE--TTTSH--HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCeEEEE--CCCCh--HHHHHHHHHHhCCCeEEEEECC
Confidence 34566554 33333 3467899999999999999853
No 361
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=31.22 E-value=63 Score=29.06 Aligned_cols=32 Identities=13% Similarity=0.188 Sum_probs=26.7
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 8 ~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
|+++++.++.| =-.++++.|+++|++|.++.-
T Consensus 42 k~vlVTGas~G---IG~aia~~la~~G~~V~~~~r 73 (293)
T 3rih_A 42 RSVLVTGGTKG---IGRGIATVFARAGANVAVAAR 73 (293)
T ss_dssp CEEEETTTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEEC
Confidence 78888888764 456889999999999998875
No 362
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=31.21 E-value=88 Score=25.74 Aligned_cols=36 Identities=11% Similarity=0.073 Sum_probs=24.5
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCcc
Q 011848 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEH 44 (476)
Q Consensus 8 ~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (476)
+|+++.....= -.=++.-.+.|.+.|++|++++...
T Consensus 10 ~v~il~~~gFe-~~E~~~p~~~l~~ag~~V~~~s~~~ 45 (177)
T 4hcj_A 10 ILYVMSGQNFQ-DEEYFESKKIFESAGYKTKVSSTFI 45 (177)
T ss_dssp EEEECCSEEEC-HHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred EEEEECCCCcc-HHHHHHHHHHHHHCCCEEEEEECCC
Confidence 34555444442 3335667788999999999999754
No 363
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=31.19 E-value=47 Score=29.53 Aligned_cols=32 Identities=13% Similarity=0.116 Sum_probs=26.1
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 8 ~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
|+++++.++.|= -.++++.|+++|++|.++.-
T Consensus 22 k~vlVTGas~gI---G~aia~~La~~G~~V~~~~r 53 (272)
T 2nwq_A 22 STLFITGATSGF---GEACARRFAEAGWSLVLTGR 53 (272)
T ss_dssp CEEEESSTTTSS---HHHHHHHHHHTTCEEEEEES
T ss_pred cEEEEeCCCCHH---HHHHHHHHHHCCCEEEEEEC
Confidence 788888877652 46899999999999998865
No 364
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2
Probab=31.13 E-value=1e+02 Score=25.53 Aligned_cols=38 Identities=13% Similarity=0.177 Sum_probs=29.8
Q ss_pred ccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCcc
Q 011848 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEH 44 (476)
Q Consensus 6 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (476)
++||+|+..++.. ..-+....+.|.+.|++|++++...
T Consensus 23 ~~kV~ill~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~~ 60 (193)
T 1oi4_A 23 SKKIAVLITDEFE-DSEFTSPADEFRKAGHEVITIEKQA 60 (193)
T ss_dssp CCEEEEECCTTBC-THHHHHHHHHHHHTTCEEEEEESST
T ss_pred CCEEEEEECCCCC-HHHHHHHHHHHHHCCCEEEEEECCC
Confidence 5699999998664 3445667788999999999999754
No 365
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=31.07 E-value=1.2e+02 Score=22.73 Aligned_cols=59 Identities=10% Similarity=0.015 Sum_probs=0.0
Q ss_pred CCCCCccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCccchhhHhhcccccccccccCCCeeEEEcC
Q 011848 1 MEKQDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHYYDRVIRHSSDAFSRYMQIPGFQFKTLT 72 (476)
Q Consensus 1 m~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (476)
|..++++||+++ -.+-.-...|.+.|.+.|++|..+......-...... .+++-+..+.
T Consensus 1 M~~~~~~~iLiv----dd~~~~~~~l~~~l~~~g~~v~~~~~~~~a~~~l~~~---------~~dlvi~d~~ 59 (140)
T 3grc_A 1 MSLAPRPRILIC----EDDPDIARLLNLMLEKGGFDSDMVHSAAQALEQVARR---------PYAAMTVDLN 59 (140)
T ss_dssp ----CCSEEEEE----CSCHHHHHHHHHHHHHTTCEEEEECSHHHHHHHHHHS---------CCSEEEECSC
T ss_pred CCCCCCCCEEEE----cCCHHHHHHHHHHHHHCCCeEEEECCHHHHHHHHHhC---------CCCEEEEeCC
No 366
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=31.04 E-value=28 Score=32.85 Aligned_cols=34 Identities=29% Similarity=0.412 Sum_probs=27.1
Q ss_pred CCccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 4 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
+.+.+|+|+-.|-.| +.+|..|+++|++|+++-.
T Consensus 4 ~~~~dVvIVGaG~aG-----l~~A~~L~~~G~~V~viE~ 37 (399)
T 2x3n_A 4 DNHIDVLINGCGIGG-----AMLAYLLGRQGHRVVVVEQ 37 (399)
T ss_dssp -CEEEEEEECCSHHH-----HHHHHHHHHTTCCEEEECS
T ss_pred CCcCCEEEECcCHHH-----HHHHHHHHhCCCcEEEEeC
Confidence 334689888877555 7889999999999999964
No 367
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=31.04 E-value=47 Score=28.14 Aligned_cols=34 Identities=15% Similarity=0.129 Sum_probs=24.7
Q ss_pred ccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCc
Q 011848 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTE 43 (476)
Q Consensus 6 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 43 (476)
|+||++. |+.|. --..|++.|.++||+|+.+.-.
T Consensus 4 m~~ilIt--GatG~--iG~~l~~~L~~~g~~V~~~~r~ 37 (227)
T 3dhn_A 4 VKKIVLI--GASGF--VGSALLNEALNRGFEVTAVVRH 37 (227)
T ss_dssp CCEEEEE--TCCHH--HHHHHHHHHHTTTCEEEEECSC
T ss_pred CCEEEEE--cCCch--HHHHHHHHHHHCCCEEEEEEcC
Confidence 5677665 33343 3467899999999999998764
No 368
>2d1p_B TUSC, hypothetical UPF0116 protein YHEM; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=30.96 E-value=76 Score=24.04 Aligned_cols=38 Identities=5% Similarity=-0.012 Sum_probs=28.2
Q ss_pred EE-EEEcCCCccCH--HHHHHHHHHHHhCCCEEEEEeCccc
Q 011848 8 HV-AILPLPAVGHV--NSMLNLAELLGHAGIKITFLNTEHY 45 (476)
Q Consensus 8 ~i-l~~~~~~~GH~--~p~l~La~~L~~rGH~Vt~~~~~~~ 45 (476)
|+ .+++.+-+|+. .-.+.+|.++...||+|.++-..+.
T Consensus 3 k~~~vv~~~P~g~~~~~~al~~a~a~~a~~~~v~vff~~DG 43 (119)
T 2d1p_B 3 RIAFVFSTAPHGTAAGREGLDALLATSALTDDLAVFFIADG 43 (119)
T ss_dssp CEEEEECSCTTTSTHHHHHHHHHHHHHTTCSCEEEEECGGG
T ss_pred EEEEEEcCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEehHH
Confidence 44 44455556766 6678899999999999999987653
No 369
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=30.92 E-value=25 Score=32.43 Aligned_cols=38 Identities=24% Similarity=0.356 Sum_probs=28.0
Q ss_pred CCCCCccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCc
Q 011848 1 MEKQDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTE 43 (476)
Q Consensus 1 m~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 43 (476)
|.+....||.++-.|.+|+ .+|..++.+|++|+++-..
T Consensus 1 Ma~p~~~~VaViGaG~MG~-----giA~~~a~~G~~V~l~D~~ 38 (319)
T 3ado_A 1 MASPAAGDVLIVGSGLVGR-----SWAMLFASGGFRVKLYDIE 38 (319)
T ss_dssp ------CEEEEECCSHHHH-----HHHHHHHHTTCCEEEECSC
T ss_pred CCCCCCCeEEEECCcHHHH-----HHHHHHHhCCCeEEEEECC
Confidence 6666667999999999886 5888899999999999763
No 370
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=30.87 E-value=2.4e+02 Score=25.52 Aligned_cols=110 Identities=12% Similarity=0.013 Sum_probs=55.6
Q ss_pred ceEEEEecccccCCHHHHHHHHHHHhhC-CCcEEEEEcCCCCCCCCCCCCCchHHHHHhcCCceeeeccCHHHHhCcCCC
Q 011848 284 SVIYVSFGSIAVMSRDQLIEFYYGLVHS-KKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAV 362 (476)
Q Consensus 284 ~~V~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~vp~~~ll~~~~~ 362 (476)
.+.+|.+|.+. ..++.++.+. +..++.+...+ . .-...+.++. ++ ..-+-...+++...++
T Consensus 7 ~igiiG~G~~g-------~~~~~~l~~~~~~~l~av~d~~-------~-~~~~~~~~~~--~~-~~~~~~~~~ll~~~~~ 68 (330)
T 3e9m_A 7 RYGIMSTAQIV-------PRFVAGLRESAQAEVRGIASRR-------L-ENAQKMAKEL--AI-PVAYGSYEELCKDETI 68 (330)
T ss_dssp EEEECSCCTTH-------HHHHHHHHHSSSEEEEEEBCSS-------S-HHHHHHHHHT--TC-CCCBSSHHHHHHCTTC
T ss_pred EEEEECchHHH-------HHHHHHHHhCCCcEEEEEEeCC-------H-HHHHHHHHHc--CC-CceeCCHHHHhcCCCC
Confidence 46677788775 2345666664 44555454321 0 0111121111 11 1234456778875444
Q ss_pred CccccccChh----HHHHHHHhCCceec-cccc--cchhhhhHhhhcceeeeEEec
Q 011848 363 GGFLTHCGWN----STLESIVAGMPMIC-WPSF--ADQQINSRFVGEVWKLGLDIK 411 (476)
Q Consensus 363 ~~~I~HgG~g----s~~eal~~GvP~l~-~P~~--~DQ~~na~r~~e~~G~g~~~~ 411 (476)
.+++----.. -+.+|+.+|+++++ -|+. .++-.-...++++.|+-+.+.
T Consensus 69 D~V~i~tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~e~~~l~~~a~~~g~~~~v~ 124 (330)
T 3e9m_A 69 DIIYIPTYNQGHYSAAKLALSQGKPVLLEKPFTLNAAEAEELFAIAQEQGVFLMEA 124 (330)
T ss_dssp SEEEECCCGGGHHHHHHHHHHTTCCEEECSSCCSSHHHHHHHHHHHHHTTCCEEEC
T ss_pred CEEEEcCCCHHHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEE
Confidence 4455433333 36778999999875 3543 344433333335567666655
No 371
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=30.79 E-value=35 Score=30.94 Aligned_cols=32 Identities=22% Similarity=0.089 Sum_probs=22.4
Q ss_pred ccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEe
Q 011848 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLN 41 (476)
Q Consensus 6 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~ 41 (476)
+|||++. |+.|.+ -..|++.|.++||+|+.+.
T Consensus 3 ~~~ilVt--GatG~i--G~~l~~~L~~~g~~v~~~~ 34 (321)
T 1e6u_A 3 KQRVFIA--GHRGMV--GSAIRRQLEQRGDVELVLR 34 (321)
T ss_dssp CEEEEEE--TTTSHH--HHHHHHHHTTCTTEEEECC
T ss_pred CCEEEEE--CCCcHH--HHHHHHHHHhCCCeEEEEe
Confidence 4576655 444544 4568899999999988765
No 372
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=30.74 E-value=54 Score=28.83 Aligned_cols=34 Identities=15% Similarity=0.114 Sum_probs=27.2
Q ss_pred ccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 6 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
|.|.++++.++.| =-.++++.|+++|++|.++..
T Consensus 25 ~~k~vlVTGas~g---IG~~la~~l~~~G~~v~i~~~ 58 (267)
T 4iiu_A 25 MSRSVLVTGASKG---IGRAIARQLAADGFNIGVHYH 58 (267)
T ss_dssp CCCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEECCCCh---HHHHHHHHHHHCCCEEEEEeC
Confidence 4478888887764 356899999999999988764
No 373
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=30.74 E-value=20 Score=32.17 Aligned_cols=49 Identities=12% Similarity=-0.035 Sum_probs=34.6
Q ss_pred ccccccChhHHHHHHHh------CCceeccccccchhhhhHhhhcceeeeEEeccccCHHHHHHHHHHHHh
Q 011848 364 GFLTHCGWNSTLESIVA------GMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMV 428 (476)
Q Consensus 364 ~~I~HgG~gs~~eal~~------GvP~l~~P~~~DQ~~na~r~~e~~G~g~~~~~~~~~~~l~~ai~~~l~ 428 (476)
++|.=||=||+.+++.. ++|++.+|.. .+|. + ..+.++++.++++++++
T Consensus 38 ~vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~G------------~lgf---l-~~~~~~~~~~~l~~l~~ 92 (272)
T 2i2c_A 38 IVISIGGDGTFLSAFHQYEERLDEIAFIGIHTG------------HLGF---Y-ADWRPAEADKLVKLLAK 92 (272)
T ss_dssp EEEEEESHHHHHHHHHHTGGGTTTCEEEEEESS------------SCCS---S-CCBCGGGHHHHHHHHHT
T ss_pred EEEEEcCcHHHHHHHHHHhhcCCCCCEEEEeCC------------CCCc---C-CcCCHHHHHHHHHHHHc
Confidence 49999999999999875 8899888741 1221 1 22356667777777765
No 374
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=30.67 E-value=47 Score=29.44 Aligned_cols=34 Identities=15% Similarity=0.063 Sum_probs=25.2
Q ss_pred ccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCcc
Q 011848 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEH 44 (476)
Q Consensus 6 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (476)
||||++.- + |.+ -..|++.|.++||+|+.++-..
T Consensus 5 ~~~ilVtG--a-G~i--G~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 5 TGTLLSFG--H-GYT--ARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CCEEEEET--C-CHH--HHHHHHHHGGGTCEEEEEESCG
T ss_pred cCcEEEEC--C-cHH--HHHHHHHHHHCCCEEEEEEcCh
Confidence 45777663 5 644 4578999999999999998643
No 375
>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=30.59 E-value=1e+02 Score=24.29 Aligned_cols=38 Identities=16% Similarity=0.271 Sum_probs=27.9
Q ss_pred cEE-EEEcCCCccCHHH--HHHHHHHHHhCCCEE-EEEeCcc
Q 011848 7 VHV-AILPLPAVGHVNS--MLNLAELLGHAGIKI-TFLNTEH 44 (476)
Q Consensus 7 ~~i-l~~~~~~~GH~~p--~l~La~~L~~rGH~V-t~~~~~~ 44 (476)
||+ ++++.|-+|+-.. .+.+|+++.+.||+| .++-..+
T Consensus 13 ~~~~ivv~~~Pyg~~~a~~Al~~A~aala~g~eV~~VFf~~D 54 (140)
T 2d1p_A 13 MRFAIVVTGPAYGTQQASSAFQFAQALIADGHELSSVFFYRE 54 (140)
T ss_dssp CEEEEEECSCSSSSSHHHHHHHHHHHHHHTTCEEEEEEECGG
T ss_pred eEEEEEEcCCCCCcHHHHHHHHHHHHHHHCCCccCEEEEech
Confidence 455 4555566776554 577899999999999 8887755
No 376
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=30.53 E-value=37 Score=28.63 Aligned_cols=31 Identities=29% Similarity=0.293 Sum_probs=23.6
Q ss_pred cEEEEEc-CCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 7 VHVAILP-LPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 7 ~~il~~~-~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
|||+|+- .|..| ..+++.|.++||+|+++..
T Consensus 1 m~i~iiGa~G~~G-----~~ia~~l~~~g~~V~~~~r 32 (212)
T 1jay_A 1 MRVALLGGTGNLG-----KGLALRLATLGHEIVVGSR 32 (212)
T ss_dssp CEEEEETTTSHHH-----HHHHHHHHTTTCEEEEEES
T ss_pred CeEEEEcCCCHHH-----HHHHHHHHHCCCEEEEEeC
Confidence 4788885 44444 4678999999999998865
No 377
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=30.44 E-value=28 Score=34.05 Aligned_cols=34 Identities=18% Similarity=0.328 Sum_probs=27.7
Q ss_pred CCccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 4 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
|+++||.|+-.|..| ..+|..|+++||+|++...
T Consensus 3 m~~~~IgvIG~G~mG-----~~lA~~L~~~G~~V~v~dr 36 (474)
T 2iz1_A 3 MAQANFGVVGMAVMG-----KNLALNVESRGYTVAIYNR 36 (474)
T ss_dssp CTTBSEEEECCSHHH-----HHHHHHHHHTTCCEEEECS
T ss_pred CCCCcEEEEeeHHHH-----HHHHHHHHhCCCEEEEEcC
Confidence 445799999888777 4578899999999988864
No 378
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=30.39 E-value=40 Score=30.29 Aligned_cols=34 Identities=18% Similarity=0.165 Sum_probs=23.7
Q ss_pred ccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCc
Q 011848 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTE 43 (476)
Q Consensus 6 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 43 (476)
|++|++.- +.|.+ -..|+++|.++||+|+.++-.
T Consensus 4 ~~~ilVtG--atG~i--G~~l~~~L~~~g~~V~~l~R~ 37 (308)
T 1qyc_A 4 RSRILLIG--ATGYI--GRHVAKASLDLGHPTFLLVRE 37 (308)
T ss_dssp CCCEEEES--TTSTT--HHHHHHHHHHTTCCEEEECCC
T ss_pred CCEEEEEc--CCcHH--HHHHHHHHHhCCCCEEEEECC
Confidence 45776654 33333 356889999999999988753
No 379
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=30.34 E-value=55 Score=29.06 Aligned_cols=33 Identities=21% Similarity=0.218 Sum_probs=26.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
.|+++++.++.| --.++++.|+++|++|.++.-
T Consensus 28 ~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~r 60 (272)
T 4dyv_A 28 KKIAIVTGAGSG---VGRAVAVALAGAGYGVALAGR 60 (272)
T ss_dssp CCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEEC
Confidence 378889888763 356899999999999988875
No 380
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=30.30 E-value=69 Score=27.61 Aligned_cols=32 Identities=25% Similarity=0.295 Sum_probs=24.9
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 8 ~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
|.++++.++.| --..+++.|+++|++|+++..
T Consensus 7 k~vlVtGasgg---iG~~~a~~l~~~G~~V~~~~r 38 (251)
T 1zk4_A 7 KVAIITGGTLG---IGLAIATKFVEEGAKVMITGR 38 (251)
T ss_dssp CEEEETTTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred cEEEEeCCCCh---HHHHHHHHHHHCCCEEEEEeC
Confidence 66777766553 456899999999999998875
No 381
>2hpv_A FMN-dependent NADH-azoreductase; structural genomics, PS protein structure initiative, southeast collaboratory for S genomics, secsg; HET: FMN; 2.00A {Enterococcus faecalis}
Probab=30.24 E-value=48 Score=27.91 Aligned_cols=38 Identities=8% Similarity=0.087 Sum_probs=24.5
Q ss_pred ccEEEEEcCCCc----cCHHHHHH-HHHHHHhCC--CEEEEEeCc
Q 011848 6 HVHVAILPLPAV----GHVNSMLN-LAELLGHAG--IKITFLNTE 43 (476)
Q Consensus 6 ~~~il~~~~~~~----GH~~p~l~-La~~L~~rG--H~Vt~~~~~ 43 (476)
||||+++...-. |+..-+.. +++.|.++| |+|.++--.
T Consensus 1 M~kilii~gS~r~~~~s~t~~la~~~~~~~~~~g~~~~v~~~dL~ 45 (208)
T 2hpv_A 1 MSKLLVVKAHPLTKEESRSVRALETFLASYRETNPSDEIEILDVY 45 (208)
T ss_dssp -CEEEEEECCSSCTTTCHHHHHHHHHHHHHHHHCTTSEEEEEETT
T ss_pred CCeEEEEEecCCCCCCCHHHHHHHHHHHHHHHhCCCCeEEEeeCC
Confidence 568876665444 65555443 567777777 999988653
No 382
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=30.11 E-value=39 Score=26.00 Aligned_cols=35 Identities=14% Similarity=0.220 Sum_probs=23.5
Q ss_pred HHHHHcCCCCceEEEecCCcc--cHHHHHHHh---CCceEEE
Q 011848 102 KEMVSDSKSPVNCIITDGYMS--RAIDAAREV---GVSIIYF 138 (476)
Q Consensus 102 ~~ll~~~~~~~D~Ii~D~~~~--~~~~~A~~l---giP~v~~ 138 (476)
.+++++ .+||+||.|...+ .|..+++.+ ++|+|.+
T Consensus 46 l~~~~~--~~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~l 85 (123)
T 2lpm_A 46 LDIARK--GQFDIAIIDVNLDGEPSYPVADILAERNVPFIFA 85 (123)
T ss_dssp HHHHHH--CCSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCB
T ss_pred HHHHHh--CCCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEE
Confidence 344454 4999999998776 455555544 6887664
No 383
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=29.94 E-value=16 Score=35.64 Aligned_cols=33 Identities=30% Similarity=0.324 Sum_probs=27.9
Q ss_pred ccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCc
Q 011848 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTE 43 (476)
Q Consensus 6 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 43 (476)
.|||+++-.|-.| ..||+.|.+.||+|+++-..
T Consensus 3 ~M~iiI~G~G~vG-----~~la~~L~~~~~~v~vId~d 35 (461)
T 4g65_A 3 AMKIIILGAGQVG-----GTLAENLVGENNDITIVDKD 35 (461)
T ss_dssp CEEEEEECCSHHH-----HHHHHHTCSTTEEEEEEESC
T ss_pred cCEEEEECCCHHH-----HHHHHHHHHCCCCEEEEECC
Confidence 5699999888766 46999999999999999763
No 384
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=29.91 E-value=57 Score=29.73 Aligned_cols=20 Identities=15% Similarity=0.036 Sum_probs=17.1
Q ss_pred HHHHHHHHHhCCCEEEEEeC
Q 011848 23 MLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 23 ~l~La~~L~~rGH~Vt~~~~ 42 (476)
-..|++.|+++||+|+.+.-
T Consensus 18 G~~l~~~L~~~G~~V~~~~r 37 (341)
T 3enk_A 18 GSHTAVELLAHGYDVVIADN 37 (341)
T ss_dssp HHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHCCCcEEEEec
Confidence 46789999999999998864
No 385
>1xjc_A MOBB protein homolog; structural genomics, midwest center for structural GEN PSI, protein structure initiative, MCSG; 2.10A {Geobacillus stearothermophilus} SCOP: c.37.1.10
Probab=29.81 E-value=82 Score=25.76 Aligned_cols=39 Identities=8% Similarity=0.031 Sum_probs=31.8
Q ss_pred ccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCcc
Q 011848 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEH 44 (476)
Q Consensus 6 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (476)
|..|.|+...+.|-..-...|+..|.++|+.|.++....
T Consensus 4 ~~~i~i~G~sGsGKTTl~~~L~~~l~~~g~~v~~ik~~~ 42 (169)
T 1xjc_A 4 MNVWQVVGYKHSGKTTLMEKWVAAAVREGWRVGTVKHHG 42 (169)
T ss_dssp CCEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CEEEEEECCCCCCHHHHHHHHHHhhHhcCCeeeEEEeCC
Confidence 445666666788999989999999999999999988643
No 386
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=29.80 E-value=1.5e+02 Score=24.34 Aligned_cols=115 Identities=11% Similarity=0.117 Sum_probs=65.2
Q ss_pred CceEEEEecccccCCHHHHHHHHHHHhhCCCcEEEEEcCCCCCCCCCCCCCchHHHHHhcCCceee---eccCHHHHhCc
Q 011848 283 QSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIA---GWVPQEEVLAH 359 (476)
Q Consensus 283 ~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~---~~vp~~~ll~~ 359 (476)
+.+++.-.|+.... ....+++.|.+.+..+-+++... +. ..+.....+...+.+... .|+++-.+-..
T Consensus 6 k~IllgvTGs~aa~---k~~~ll~~L~~~g~~V~vv~T~~-----A~-~fi~~~~l~~l~~~v~~~~~~~~~~hi~l~~~ 76 (175)
T 3qjg_A 6 ENVLICLCGSVNSI---NISHYIIELKSKFDEVNVIASTN-----GR-KFINGEILKQFCDNYYDEFEDPFLNHVDIANK 76 (175)
T ss_dssp CEEEEEECSSGGGG---GHHHHHHHHTTTCSEEEEEECTG-----GG-GGSCHHHHHHHCSCEECTTTCTTCCHHHHHHT
T ss_pred CEEEEEEeCHHHHH---HHHHHHHHHHHCCCEEEEEECcC-----HH-HHhhHHHHHHhcCCEEecCCCCccccccccch
Confidence 56666667776533 24556777777788776666532 11 122222222233322211 34667666666
Q ss_pred CCCCccccccChhHHHH-------------HHHhCCceeccccccc-------hhhhhHhhhcceeeeE
Q 011848 360 SAVGGFLTHCGWNSTLE-------------SIVAGMPMICWPSFAD-------QQINSRFVGEVWKLGL 408 (476)
Q Consensus 360 ~~~~~~I~HgG~gs~~e-------------al~~GvP~l~~P~~~D-------Q~~na~r~~e~~G~g~ 408 (476)
+|+ .+|-=+-.||+.- ++..++|++++|-..+ -..|-.++. +.|+-+
T Consensus 77 aD~-~vVaPaTanTlakiA~GiaDnLlt~~~la~~~pvvl~Pamn~~m~~~p~~~~Nl~~L~-~~G~~i 143 (175)
T 3qjg_A 77 HDK-IIILPATSNTINKIANGICDNLLLTICHTAFEKLSIFPNMNLRMWENPVTQNNIRLLK-DYGVSI 143 (175)
T ss_dssp CSE-EEEEEECHHHHHHHHTTCCCSHHHHHHHTCGGGEEEEECEEHHHHTCHHHHHHHHHHH-HTTCEE
T ss_pred hCE-EEEeeCCHHHHHHHHccccCCHHHHHHHHcCCCEEEEecCChhhhcCHHHHHHHHHHH-HCCCEE
Confidence 665 5666666665543 4667999999995322 235777774 567643
No 387
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=29.77 E-value=47 Score=29.92 Aligned_cols=34 Identities=24% Similarity=0.261 Sum_probs=23.9
Q ss_pred ccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCc
Q 011848 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTE 43 (476)
Q Consensus 6 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 43 (476)
|+||++. |+.|.+ -..|++.|.++||+|+.++-.
T Consensus 7 ~~~vlVt--GatG~i--G~~l~~~L~~~g~~V~~~~r~ 40 (321)
T 3vps_A 7 KHRILIT--GGAGFI--GGHLARALVASGEEVTVLDDL 40 (321)
T ss_dssp CCEEEEE--TTTSHH--HHHHHHHHHHTTCCEEEECCC
T ss_pred CCeEEEE--CCCChH--HHHHHHHHHHCCCEEEEEecC
Confidence 4566654 333433 457899999999999998753
No 388
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=29.77 E-value=75 Score=27.80 Aligned_cols=32 Identities=22% Similarity=0.206 Sum_probs=24.8
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 8 ~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
|+++++.++.| =-.++++.|+++||+|++..-
T Consensus 8 k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r 39 (260)
T 1nff_A 8 KVALVSGGARG---MGASHVRAMVAEGAKVVFGDI 39 (260)
T ss_dssp CEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 67777776653 346789999999999998865
No 389
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=29.66 E-value=50 Score=30.11 Aligned_cols=32 Identities=22% Similarity=0.106 Sum_probs=22.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
++|++. |+.|.+ -..|++.|+++||+|+.+.-
T Consensus 4 ~~vlVt--GatG~i--G~~l~~~L~~~G~~V~~~~r 35 (345)
T 2z1m_A 4 KRALIT--GIRGQD--GAYLAKLLLEKGYEVYGADR 35 (345)
T ss_dssp CEEEEE--TTTSHH--HHHHHHHHHHTTCEEEEECS
T ss_pred CEEEEE--CCCChH--HHHHHHHHHHCCCEEEEEEC
Confidence 466544 333433 46789999999999998875
No 390
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=29.66 E-value=77 Score=24.63 Aligned_cols=32 Identities=16% Similarity=0.364 Sum_probs=24.4
Q ss_pred CceEEEecCCcc--cHHHHHHHh-------CCceEEEecch
Q 011848 111 PVNCIITDGYMS--RAIDAAREV-------GVSIIYFRTIS 142 (476)
Q Consensus 111 ~~D~Ii~D~~~~--~~~~~A~~l-------giP~v~~~~~~ 142 (476)
+||+||.|...+ .|..+++.+ .+|+|.++...
T Consensus 57 ~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa~~ 97 (134)
T 3to5_A 57 DFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAEA 97 (134)
T ss_dssp CCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEESSC
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEECCC
Confidence 899999998877 577777655 48888876543
No 391
>3f5d_A Protein YDEA; unknow protein, PSI-II, nysgrc, structural genomics, protein structure initiative; 2.06A {Bacillus subtilis}
Probab=29.54 E-value=46 Score=28.25 Aligned_cols=39 Identities=13% Similarity=0.082 Sum_probs=30.3
Q ss_pred CccEEEEEcCCCccCHHHHHHHHHHHHhC-CCEEEEEeCcc
Q 011848 5 DHVHVAILPLPAVGHVNSMLNLAELLGHA-GIKITFLNTEH 44 (476)
Q Consensus 5 ~~~~il~~~~~~~GH~~p~l~La~~L~~r-GH~Vt~~~~~~ 44 (476)
.|.||+|+..+..-.+- ....++.|.++ |++|.+++...
T Consensus 2 ~m~kV~ill~~g~~~~E-~~~~~~~l~~~~~~~v~~vs~~~ 41 (206)
T 3f5d_A 2 SLKKALFLILDQYADWE-GVYLASALNQREDWSVHTVSLDP 41 (206)
T ss_dssp -CEEEEEECCSSBCTTT-SHHHHHHHHTSTTEEEEEEESSS
T ss_pred CccEEEEEEcCCCcHHH-HHHHHHHHhccCCeEEEEEECCC
Confidence 36699999998776543 44677888888 99999999865
No 392
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=29.47 E-value=66 Score=28.97 Aligned_cols=32 Identities=19% Similarity=0.237 Sum_probs=26.1
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 8 ~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
|+++++.++.| =-.++++.|+++|++|.++.-
T Consensus 32 k~vlVTGas~g---IG~~la~~l~~~G~~V~~~~r 63 (301)
T 3tjr_A 32 RAAVVTGGASG---IGLATATEFARRGARLVLSDV 63 (301)
T ss_dssp CEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEEC
Confidence 68888877754 457899999999999988875
No 393
>2qh9_A UPF0215 protein AF_1433; structural genomics, PSI-2, MCSG, PR structure initiative; 1.80A {Archaeoglobus fulgidus}
Probab=29.47 E-value=95 Score=25.81 Aligned_cols=40 Identities=25% Similarity=0.329 Sum_probs=28.7
Q ss_pred HHHHHHHcCCCC--ceEEEecCCcc------cHHHHHHHhCCceEEEe
Q 011848 100 LLKEMVSDSKSP--VNCIITDGYMS------RAIDAAREVGVSIIYFR 139 (476)
Q Consensus 100 ~~~~ll~~~~~~--~D~Ii~D~~~~------~~~~~A~~lgiP~v~~~ 139 (476)
.+.++++++..+ +|+|+.|...+ ....+...+|+|+|.+.
T Consensus 51 ~i~~~~~~l~~~p~~~vvllDG~g~agfn~~di~~l~~~~~~P~I~V~ 98 (184)
T 2qh9_A 51 KLISMVRRSKFREQIKCIFLPGITLGGFNLVDIQRVYRETKIPVVVVM 98 (184)
T ss_dssp HHHHHHTTCTTTTTEEEEEESSSEETTTEECCHHHHHHHHCCCEEEEE
T ss_pred HHHHHHHhcCCCCCCcEEEECCEeeccCCEeCHHHHHHhhCCCEEEEE
Confidence 345556565334 69999998766 33468899999999874
No 394
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=29.44 E-value=64 Score=29.02 Aligned_cols=32 Identities=16% Similarity=0.205 Sum_probs=26.1
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 8 ~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
|+++++.++.| --.++++.|+++|++|+++.-
T Consensus 27 k~vlVTGas~g---IG~aia~~L~~~G~~V~~~~r 58 (297)
T 1xhl_A 27 KSVIITGSSNG---IGRSAAVIFAKEGAQVTITGR 58 (297)
T ss_dssp CEEEETTCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 77888887664 356899999999999998865
No 395
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=29.44 E-value=75 Score=26.75 Aligned_cols=37 Identities=14% Similarity=0.088 Sum_probs=27.8
Q ss_pred CccEEEEEcCCCc-------cCHHHHHHHHHHHHhCCCEEEEEe
Q 011848 5 DHVHVAILPLPAV-------GHVNSMLNLAELLGHAGIKITFLN 41 (476)
Q Consensus 5 ~~~~il~~~~~~~-------GH~~p~l~La~~L~~rGH~Vt~~~ 41 (476)
.|.+|.+++.... -...-...|++.|+++|+.|..-.
T Consensus 22 ~m~~IaV~Gss~~~~~~~~~~~~~~A~~lg~~LA~~G~~vVsGg 65 (195)
T 1rcu_A 22 HMKKVVVVGYSGPVNKSPVSELRDICLELGRTLAKKGYLVFNGG 65 (195)
T ss_dssp -CCEEEEEECCSCTTSTTTGGGHHHHHHHHHHHHHTTCEEEECC
T ss_pred CCCeEEEEecCCCCCccccHHHHHHHHHHHHHHHHCCCEEEeCC
Confidence 4557988886432 456788999999999999988753
No 396
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=29.43 E-value=61 Score=29.49 Aligned_cols=32 Identities=25% Similarity=0.228 Sum_probs=26.7
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 8 ~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
|+++++.++.| --.++|+.|+++|++|.++..
T Consensus 47 k~~lVTGas~G---IG~aia~~la~~G~~Vv~~~~ 78 (317)
T 3oec_A 47 KVAFITGAARG---QGRTHAVRLAQDGADIVAIDL 78 (317)
T ss_dssp CEEEESSCSSH---HHHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEeCCCcH---HHHHHHHHHHHCCCeEEEEec
Confidence 78899988764 457899999999999998864
No 397
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=29.42 E-value=33 Score=30.14 Aligned_cols=33 Identities=6% Similarity=0.181 Sum_probs=25.8
Q ss_pred CccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 5 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
+||||+|+-.|..|. .+++.|.+.||+|+++..
T Consensus 2 ~~m~i~iiG~G~mG~-----~~a~~l~~~g~~v~~~~~ 34 (259)
T 2ahr_A 2 NAMKIGIIGVGKMAS-----AIIKGLKQTPHELIISGS 34 (259)
T ss_dssp -CCEEEEECCSHHHH-----HHHHHHTTSSCEEEEECS
T ss_pred CccEEEEECCCHHHH-----HHHHHHHhCCCeEEEECC
Confidence 367999998777664 578889999999987764
No 398
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=29.36 E-value=39 Score=29.69 Aligned_cols=34 Identities=15% Similarity=0.125 Sum_probs=25.5
Q ss_pred EEEEEcCCCc-cCHHHHHHHHHHHHhCCCEEEEEeCc
Q 011848 8 HVAILPLPAV-GHVNSMLNLAELLGHAGIKITFLNTE 43 (476)
Q Consensus 8 ~il~~~~~~~-GH~~p~l~La~~L~~rGH~Vt~~~~~ 43 (476)
|+++++.++. |-+ -.++++.|+++|++|.++.-.
T Consensus 9 k~vlVTGas~~~gI--G~~ia~~l~~~G~~V~~~~r~ 43 (261)
T 2wyu_A 9 KKALVMGVTNQRSL--GFAIAAKLKEAGAEVALSYQA 43 (261)
T ss_dssp CEEEEESCCSSSSH--HHHHHHHHHHHTCEEEEEESC
T ss_pred CEEEEECCCCCCcH--HHHHHHHHHHCCCEEEEEcCC
Confidence 6777887762 333 467899999999999988753
No 399
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=29.35 E-value=49 Score=31.89 Aligned_cols=31 Identities=23% Similarity=0.282 Sum_probs=25.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
|||.|+-.|..| ..+|..|+++||+|+++..
T Consensus 1 mkI~VIG~G~vG-----~~~A~~la~~G~~V~~~d~ 31 (436)
T 1mv8_A 1 MRISIFGLGYVG-----AVCAGCLSARGHEVIGVDV 31 (436)
T ss_dssp CEEEEECCSTTH-----HHHHHHHHHTTCEEEEECS
T ss_pred CEEEEECCCHHH-----HHHHHHHHHCCCEEEEEEC
Confidence 489999777776 5788899999999998864
No 400
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=29.34 E-value=32 Score=31.69 Aligned_cols=38 Identities=16% Similarity=0.294 Sum_probs=26.5
Q ss_pred CCCCccEEEEEcCCCccCHHHHHHHHHHHHhCCC-EEEEEeCcc
Q 011848 2 EKQDHVHVAILPLPAVGHVNSMLNLAELLGHAGI-KITFLNTEH 44 (476)
Q Consensus 2 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH-~Vt~~~~~~ 44 (476)
++|+++||.++-.|..| ..+|..|+..|| +|+++-...
T Consensus 3 ~~m~~~kI~viGaG~vG-----~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 3 GSMARNKIALIGSGMIG-----GTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp ---CCCEEEEECCSHHH-----HHHHHHHHHTTCCEEEEECSSS
T ss_pred CCCcCCEEEEECCCHHH-----HHHHHHHHhCCCCeEEEEeCCc
Confidence 46778899998654443 257888999999 988887543
No 401
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=29.32 E-value=1e+02 Score=23.31 Aligned_cols=48 Identities=6% Similarity=-0.114 Sum_probs=34.0
Q ss_pred hCCceeccccccchhhhhHhhhcceeeeEEeccccCHHHHHHHHHHHHhH
Q 011848 380 AGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMVE 429 (476)
Q Consensus 380 ~GvP~l~~P~~~DQ~~na~r~~e~~G~g~~~~~~~~~~~l~~ai~~~l~~ 429 (476)
..+|++++-...| .....++. +.|+--.+.+.++.++|.++|++++..
T Consensus 74 ~~~pii~ls~~~~-~~~~~~~~-~~g~~~~l~kP~~~~~l~~~i~~~~~~ 121 (142)
T 2qxy_A 74 PDTKVAVLSAYVD-KDLIINSV-KAGAVDYILKPFRLDYLLERVKKIISS 121 (142)
T ss_dssp TTCEEEEEESCCC-HHHHHHHH-HHTCSCEEESSCCHHHHHHHHHHHHHC
T ss_pred CCCCEEEEECCCC-HHHHHHHH-HCCcceeEeCCCCHHHHHHHHHHHHhh
Confidence 3688887755444 33444442 467766677889999999999999873
No 402
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=29.32 E-value=55 Score=29.33 Aligned_cols=33 Identities=15% Similarity=0.204 Sum_probs=27.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
.|+++++.++.| =-.++|+.|+++|++|.++.-
T Consensus 12 ~k~vlITGas~G---IG~~~a~~L~~~G~~V~~~~r 44 (311)
T 3o26_A 12 RRCAVVTGGNKG---IGFEICKQLSSNGIMVVLTCR 44 (311)
T ss_dssp CCEEEESSCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CcEEEEecCCch---HHHHHHHHHHHCCCEEEEEeC
Confidence 478899988764 456899999999999998875
No 403
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=29.27 E-value=38 Score=30.84 Aligned_cols=32 Identities=22% Similarity=0.299 Sum_probs=26.2
Q ss_pred ccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 6 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
++||+|+-.|..|. .+|..|.+.||+|+++..
T Consensus 30 ~~~I~iIG~G~mG~-----~~a~~l~~~g~~V~~~~~ 61 (316)
T 2uyy_A 30 DKKIGFLGLGLMGS-----GIVSNLLKMGHTVTVWNR 61 (316)
T ss_dssp SSCEEEECCSHHHH-----HHHHHHHHTTCCEEEECS
T ss_pred CCeEEEEcccHHHH-----HHHHHHHhCCCEEEEEeC
Confidence 47999998887774 578889999999988764
No 404
>3r6w_A FMN-dependent NADH-azoreductase 1; nitrofurazone, P. aeruginosa, nitroreductase, flavodoxin, oxidoreductase; HET: FMN NFZ; 2.08A {Pseudomonas aeruginosa} PDB: 3lt5_A* 2v9c_A* 3keg_A*
Probab=29.21 E-value=35 Score=29.00 Aligned_cols=38 Identities=5% Similarity=0.036 Sum_probs=24.8
Q ss_pred ccEEEEEcCCCccC---HHHHH-HHHHHHHhC--CCEEEEEeCc
Q 011848 6 HVHVAILPLPAVGH---VNSML-NLAELLGHA--GIKITFLNTE 43 (476)
Q Consensus 6 ~~~il~~~~~~~GH---~~p~l-~La~~L~~r--GH~Vt~~~~~ 43 (476)
||||+++...-.++ ..-+. .+++.|.++ ||+|.++--.
T Consensus 1 MmkiLii~gSpr~~~s~t~~l~~~~~~~~~~~~~g~~v~~~dL~ 44 (212)
T 3r6w_A 1 MSRILAVHASPRGERSQSRRLAEVFLAAYREAHPQARVARREVG 44 (212)
T ss_dssp CCCEEEEECCSCSTTCHHHHHHHHHHHHHHHHCTTCCEEEEESS
T ss_pred CCEEEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCCeEEEEECC
Confidence 67888777765553 33322 456666666 9999988753
No 405
>2c5m_A CTP synthase; cytidine 5-prime triphosphate synthetase, CTP synthetase, UTP, glutamine, amidotransferase, ligase, phosphorylation; 2.80A {Homo sapiens} PDB: 2vo1_A 3ihl_A*
Probab=29.20 E-value=36 Score=30.07 Aligned_cols=40 Identities=10% Similarity=0.221 Sum_probs=32.8
Q ss_pred CccEEEEEcCC---CccCHHHHHHHHHHHHhCCCEEEEEeCcc
Q 011848 5 DHVHVAILPLP---AVGHVNSMLNLAELLGHAGIKITFLNTEH 44 (476)
Q Consensus 5 ~~~~il~~~~~---~~GH~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (476)
.+||..|++.+ +.|-=.-.-.|+..|..||++|+..--..
T Consensus 21 ~~mKyIfVTGGVvSglGKGi~aaSlG~LLk~rG~~Vt~~KiDP 63 (294)
T 2c5m_A 21 QSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDP 63 (294)
T ss_dssp CCCEEEEEEECSSTTSCHHHHHHHHHHHHHTTTCCEECCEEEC
T ss_pred eceEEEEEcCccccccchHHHHHHHHHHHHHCCCeeEEEecCC
Confidence 35699999987 55777888999999999999999876433
No 406
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=29.16 E-value=59 Score=29.83 Aligned_cols=31 Identities=23% Similarity=0.121 Sum_probs=25.9
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEe
Q 011848 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLN 41 (476)
Q Consensus 8 ~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~ 41 (476)
|+++++.++.| --.++++.|+++|++|+++.
T Consensus 47 k~~lVTGas~G---IG~aia~~La~~G~~Vv~~~ 77 (328)
T 2qhx_A 47 PVALVTGAAKR---LGRSIAEGLHAEGYAVCLHY 77 (328)
T ss_dssp CEEEETTCSSH---HHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCCH---HHHHHHHHHHHCCCEEEEEc
Confidence 78888887764 45689999999999999887
No 407
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=29.13 E-value=56 Score=29.18 Aligned_cols=32 Identities=22% Similarity=0.198 Sum_probs=26.6
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 8 ~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
|+++++.++.| --.++|+.|+++|++|.++..
T Consensus 29 k~~lVTGas~G---IG~aia~~la~~G~~V~~~~r 60 (283)
T 3v8b_A 29 PVALITGAGSG---IGRATALALAADGVTVGALGR 60 (283)
T ss_dssp CEEEEESCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 78888888764 457899999999999998875
No 408
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=29.10 E-value=95 Score=22.90 Aligned_cols=41 Identities=12% Similarity=0.207 Sum_probs=0.0
Q ss_pred HHHHHHHHcCCCCceEEEecCCcc--cHHHHHHHh-------CCceEEEecc
Q 011848 99 PLLKEMVSDSKSPVNCIITDGYMS--RAIDAAREV-------GVSIIYFRTI 141 (476)
Q Consensus 99 ~~~~~ll~~~~~~~D~Ii~D~~~~--~~~~~A~~l-------giP~v~~~~~ 141 (476)
....+.++.. +||+||.|...+ .+..+.+.+ ++|++.++..
T Consensus 36 ~~al~~l~~~--~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~ 85 (122)
T 3gl9_A 36 QIALEKLSEF--TPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAK 85 (122)
T ss_dssp HHHHHHHTTB--CCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESC
T ss_pred HHHHHHHHhc--CCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecC
No 409
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=28.88 E-value=37 Score=32.10 Aligned_cols=34 Identities=21% Similarity=0.237 Sum_probs=26.4
Q ss_pred CCccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 4 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
++.++|+|+-.|-. -+.+|..|+++|++|+++--
T Consensus 21 ~~~~dV~IVGaG~a-----Gl~~A~~La~~G~~V~v~E~ 54 (407)
T 3rp8_A 21 QGHMKAIVIGAGIG-----GLSAAVALKQSGIDCDVYEA 54 (407)
T ss_dssp --CCEEEEECCSHH-----HHHHHHHHHHTTCEEEEEES
T ss_pred CCCCEEEEECCCHH-----HHHHHHHHHhCCCCEEEEeC
Confidence 34578998876644 48899999999999999964
No 410
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=28.86 E-value=40 Score=30.23 Aligned_cols=31 Identities=26% Similarity=0.340 Sum_probs=25.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
|||.|+-.|..| ..+|+.|+++||+|++...
T Consensus 2 ~~i~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr 32 (287)
T 3pef_A 2 QKFGFIGLGIMG-----SAMAKNLVKAGCSVTIWNR 32 (287)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CEEEEEeecHHH-----HHHHHHHHHCCCeEEEEcC
Confidence 589999777666 5678999999999998765
No 411
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=28.85 E-value=57 Score=28.58 Aligned_cols=33 Identities=18% Similarity=0.094 Sum_probs=26.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
.|+++++.++.| --.++++.|+++|++|.+...
T Consensus 4 ~k~vlVTGas~g---IG~aia~~l~~~G~~vv~~~~ 36 (258)
T 3oid_A 4 NKCALVTGSSRG---VGKAAAIRLAENGYNIVINYA 36 (258)
T ss_dssp CCEEEESSCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEecCCch---HHHHHHHHHHHCCCEEEEEcC
Confidence 378888887753 356899999999999998743
No 412
>1weh_A Conserved hypothetical protein TT1887; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.129.1.1
Probab=28.84 E-value=61 Score=26.61 Aligned_cols=38 Identities=11% Similarity=0.137 Sum_probs=29.5
Q ss_pred cEEEEEcCCCcc----CHHHHHHHHHHHHhCCCEEEEEeCcc
Q 011848 7 VHVAILPLPAVG----HVNSMLNLAELLGHAGIKITFLNTEH 44 (476)
Q Consensus 7 ~~il~~~~~~~G----H~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (476)
.+|.++.....+ +..-...|++.|+++|+.|..-....
T Consensus 2 ~~V~V~gs~~~~~~~~~~~~A~~lg~~La~~g~~lV~Ggg~G 43 (171)
T 1weh_A 2 RLLAVFVSSRLSPEDPLYARWVRYGEVLAEEGFGLACGGYQG 43 (171)
T ss_dssp EEEEEECCSSCCTTSHHHHHHHHHHHHHHHTTEEEEECCSST
T ss_pred CEEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEeCChhh
Confidence 468888876654 45678889999999998888877653
No 413
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=28.83 E-value=47 Score=32.32 Aligned_cols=33 Identities=21% Similarity=0.381 Sum_probs=27.4
Q ss_pred HHHHHHcCCCCceEEEecCCcccHHHHHHHhCCceEEE
Q 011848 101 LKEMVSDSKSPVNCIITDGYMSRAIDAAREVGVSIIYF 138 (476)
Q Consensus 101 ~~~ll~~~~~~~D~Ii~D~~~~~~~~~A~~lgiP~v~~ 138 (476)
+++++++. +||+||.+.. ...+|+++|||++.+
T Consensus 367 le~~i~~~--~pDllig~~~---~~~~a~k~gip~~~~ 399 (458)
T 3pdi_B 367 LEHAARAG--QAQLVIGNSH---ALASARRLGVPLLRA 399 (458)
T ss_dssp HHHHHHHH--TCSEEEECTT---HHHHHHHTTCCEEEC
T ss_pred HHHHHHhc--CCCEEEEChh---HHHHHHHcCCCEEEe
Confidence 56677776 9999999855 678999999999975
No 414
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=28.83 E-value=58 Score=28.13 Aligned_cols=33 Identities=24% Similarity=0.263 Sum_probs=24.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
.|.++++.++.| --..+++.|+++|++|+++..
T Consensus 2 ~k~vlItGasgg---iG~~~a~~l~~~G~~V~~~~r 34 (250)
T 2cfc_A 2 SRVAIVTGASSG---NGLAIATRFLARGDRVAALDL 34 (250)
T ss_dssp CCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCch---HHHHHHHHHHHCCCEEEEEeC
Confidence 366677766542 356889999999999998875
No 415
>1byi_A Dethiobiotin synthase; biotin synthesis, cyclo-ligase, ligase; 0.97A {Escherichia coli} SCOP: c.37.1.10 PDB: 1bs1_A* 1a82_A 1dad_A* 1dae_A* 1daf_A* 1dag_A* 1dah_A* 1dai_A* 1dak_A* 1dam_A* 1dbs_A 1dts_A
Probab=28.79 E-value=48 Score=28.11 Aligned_cols=33 Identities=15% Similarity=0.090 Sum_probs=27.7
Q ss_pred EEEEcC-CCccCHHHHHHHHHHHHhCCCEEEEEe
Q 011848 9 VAILPL-PAVGHVNSMLNLAELLGHAGIKITFLN 41 (476)
Q Consensus 9 il~~~~-~~~GH~~p~l~La~~L~~rGH~Vt~~~ 41 (476)
|++... ++-|-..-...||..|+++|++|.++-
T Consensus 4 I~v~s~kgGvGKTt~a~nLa~~la~~G~rVll~d 37 (224)
T 1byi_A 4 YFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK 37 (224)
T ss_dssp EEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEc
Confidence 444443 788999999999999999999999974
No 416
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=28.76 E-value=22 Score=33.93 Aligned_cols=31 Identities=23% Similarity=0.329 Sum_probs=25.9
Q ss_pred ccEEEEEcCCCccCHHHHHHHHHHHHh-CCCEEEEEe
Q 011848 6 HVHVAILPLPAVGHVNSMLNLAELLGH-AGIKITFLN 41 (476)
Q Consensus 6 ~~~il~~~~~~~GH~~p~l~La~~L~~-rGH~Vt~~~ 41 (476)
||||+|+-.|+.|. .+|..|++ .||+|+++.
T Consensus 2 ~mkI~ViGaG~~G~-----~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 2 TVKVCVCGGGNGAH-----TLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp CEEEEEECCSHHHH-----HHHHHHTTSTTEEEEEEC
T ss_pred CceEEEECCCHHHH-----HHHHHHHhCCCCEEEEEe
Confidence 47999998888775 56888988 499999987
No 417
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=28.70 E-value=70 Score=28.55 Aligned_cols=32 Identities=13% Similarity=0.091 Sum_probs=26.1
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 8 ~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
|+++++.++.| =-.++++.|+++|++|.++.-
T Consensus 17 k~vlVTGas~g---IG~~~a~~L~~~G~~V~~~~r 48 (291)
T 3rd5_A 17 RTVVITGANSG---LGAVTARELARRGATVIMAVR 48 (291)
T ss_dssp CEEEEECCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCCh---HHHHHHHHHHHCCCEEEEEEC
Confidence 77888887753 347899999999999998875
No 418
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=28.67 E-value=53 Score=29.28 Aligned_cols=33 Identities=21% Similarity=0.198 Sum_probs=26.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
.|+++++.++.| --.++|+.|+++|++|.++.-
T Consensus 8 gk~vlVTGas~G---IG~aia~~la~~G~~V~~~~r 40 (280)
T 3tox_A 8 GKIAIVTGASSG---IGRAAALLFAREGAKVVVTAR 40 (280)
T ss_dssp TCEEEESSTTSH---HHHHHHHHHHHTTCEEEECCS
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEEC
Confidence 378888888764 356899999999999887654
No 419
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=28.66 E-value=75 Score=27.72 Aligned_cols=32 Identities=22% Similarity=0.314 Sum_probs=25.6
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 8 ~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
|+++++.++.| --.++++.|+++|++|+++.-
T Consensus 15 k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r 46 (260)
T 2zat_A 15 KVALVTASTDG---IGLAIARRLAQDGAHVVVSSR 46 (260)
T ss_dssp CEEEESSCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 77888876653 356899999999999998875
No 420
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=28.61 E-value=53 Score=28.88 Aligned_cols=32 Identities=6% Similarity=-0.012 Sum_probs=27.1
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 8 ~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
|+++++.++.| --.++|+.|+++|++|.++..
T Consensus 12 k~vlVTGas~G---IG~aia~~la~~G~~V~~~~r 43 (262)
T 3ksu_A 12 KVIVIAGGIKN---LGALTAKTFALESVNLVLHYH 43 (262)
T ss_dssp CEEEEETCSSH---HHHHHHHHHTTSSCEEEEEES
T ss_pred CEEEEECCCch---HHHHHHHHHHHCCCEEEEEec
Confidence 88899988876 467899999999999998763
No 421
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A
Probab=28.60 E-value=57 Score=28.07 Aligned_cols=33 Identities=18% Similarity=0.189 Sum_probs=25.3
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCc
Q 011848 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTE 43 (476)
Q Consensus 8 ~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 43 (476)
|.++++.++.| --.++++.|+++|++|.++.-.
T Consensus 3 k~vlVTGas~g---iG~~~a~~l~~~G~~V~~~~r~ 35 (239)
T 2ekp_A 3 RKALVTGGSRG---IGRAIAEALVARGYRVAIASRN 35 (239)
T ss_dssp CEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 56777776653 3568899999999999988753
No 422
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=28.60 E-value=1.7e+02 Score=26.53 Aligned_cols=123 Identities=14% Similarity=0.014 Sum_probs=62.5
Q ss_pred ceEEEEecccccCCHHHHHHHHHHHhhC-CCcEEEEEcCCCCCCCCCCCCCchHHHHHhcCCceeeeccCHHHHhCcCCC
Q 011848 284 SVIYVSFGSIAVMSRDQLIEFYYGLVHS-KKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAV 362 (476)
Q Consensus 284 ~~V~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~vp~~~ll~~~~~ 362 (476)
++.+|.+|.+. ...+.++.+. +..++.++.. .++... ...+..-+. +-...+++..+++
T Consensus 5 ~vgiiG~G~~g-------~~~~~~l~~~~~~~l~av~d~-----------~~~~~~-~~~~~~~~~-~~~~~~~l~~~~~ 64 (331)
T 4hkt_A 5 RFGLLGAGRIG-------KVHAKAVSGNADARLVAVADA-----------FPAAAE-AIAGAYGCE-VRTIDAIEAAADI 64 (331)
T ss_dssp EEEEECCSHHH-------HHHHHHHHHCTTEEEEEEECS-----------SHHHHH-HHHHHTTCE-ECCHHHHHHCTTC
T ss_pred EEEEECCCHHH-------HHHHHHHhhCCCcEEEEEECC-----------CHHHHH-HHHHHhCCC-cCCHHHHhcCCCC
Confidence 45677777765 2345555554 4565555532 112111 111111122 5667788875444
Q ss_pred Ccccccc----ChhHHHHHHHhCCceec-cccc--cchhhhhHhhhcceeeeEEec--cccCHHHHHHHHHHHHh
Q 011848 363 GGFLTHC----GWNSTLESIVAGMPMIC-WPSF--ADQQINSRFVGEVWKLGLDIK--DLCDRNIVEKAVNDLMV 428 (476)
Q Consensus 363 ~~~I~Hg----G~gs~~eal~~GvP~l~-~P~~--~DQ~~na~r~~e~~G~g~~~~--~~~~~~~l~~ai~~~l~ 428 (476)
.+++--- -.--+.+|+.+|+++++ -|+. .++-.-...++++.|+-+.+. .++.+. .+.+++++.
T Consensus 65 D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~--~~~~~~~i~ 137 (331)
T 4hkt_A 65 DAVVICTPTDTHADLIERFARAGKAIFCEKPIDLDAERVRACLKVVSDTKAKLMVGFNRRFDPH--FMAVRKAID 137 (331)
T ss_dssp CEEEECSCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEECCGGGGCHH--HHHHHHHHH
T ss_pred CEEEEeCCchhHHHHHHHHHHcCCcEEEecCCCCCHHHHHHHHHHHHHcCCeEEEcccccCCHH--HHHHHHHHH
Confidence 4455322 23457788999999876 3543 344433333335667766665 244432 334444443
No 423
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=28.59 E-value=70 Score=28.16 Aligned_cols=32 Identities=16% Similarity=0.187 Sum_probs=26.8
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 8 ~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
|+++++.++.| --.++|+.|+++|++|.++..
T Consensus 30 k~vlITGas~g---IG~~la~~l~~~G~~V~~~~r 61 (271)
T 4iin_A 30 KNVLITGASKG---IGAEIAKTLASMGLKVWINYR 61 (271)
T ss_dssp CEEEETTCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 78888887765 457899999999999998876
No 424
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=28.56 E-value=49 Score=30.90 Aligned_cols=34 Identities=21% Similarity=0.309 Sum_probs=24.2
Q ss_pred CccEEEEEcCCCccCHHHHHHHHHHHHhCC-CEEEEEeC
Q 011848 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAG-IKITFLNT 42 (476)
Q Consensus 5 ~~~~il~~~~~~~GH~~p~l~La~~L~~rG-H~Vt~~~~ 42 (476)
+||+|++. |+.|.+ -..|++.|.++| |+|+.+.-
T Consensus 31 ~~~~ilVt--GatG~i--G~~l~~~L~~~g~~~V~~~~r 65 (377)
T 2q1s_A 31 ANTNVMVV--GGAGFV--GSNLVKRLLELGVNQVHVVDN 65 (377)
T ss_dssp TTCEEEEE--TTTSHH--HHHHHHHHHHTTCSEEEEECC
T ss_pred CCCEEEEE--CCccHH--HHHHHHHHHHcCCceEEEEEC
Confidence 45676654 334433 467899999999 99999864
No 425
>3fwy_A Light-independent protochlorophyllide reductase I ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2}
Probab=28.54 E-value=59 Score=29.76 Aligned_cols=39 Identities=13% Similarity=0.156 Sum_probs=33.0
Q ss_pred ccEEEEEcC-CCccCHHHHHHHHHHHHhCCCEEEEEeCcc
Q 011848 6 HVHVAILPL-PAVGHVNSMLNLAELLGHAGIKITFLNTEH 44 (476)
Q Consensus 6 ~~~il~~~~-~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (476)
.+||.-++. |+-|-..-...||.+|+++|++|.++-...
T Consensus 47 ~aKVIAIaGKGGVGKTTtavNLA~aLA~~GkkVllID~Dp 86 (314)
T 3fwy_A 47 GAKVFAVYGKGGIGKSTTSSNLSAAFSILGKRVLQIGCDP 86 (314)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEESS
T ss_pred CceEEEEECCCccCHHHHHHHHHHHHHHCCCeEEEEecCC
Confidence 457766655 789999999999999999999999998653
No 426
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=28.52 E-value=41 Score=26.27 Aligned_cols=105 Identities=10% Similarity=0.009 Sum_probs=61.0
Q ss_pred HHHHHHHHHHHhhCCCcEEEEEcCCCCCCCCCCCCCchHHHHHhcCCceeeec-cCHHHHhCcCCCCccccccChhHHHH
Q 011848 298 RDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGW-VPQEEVLAHSAVGGFLTHCGWNSTLE 376 (476)
Q Consensus 298 ~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~-vp~~~ll~~~~~~~~I~HgG~gs~~e 376 (476)
+.....+...++..|+..+..... |. -.-...+..+.++.+.+| +|..+ |. .+.+
T Consensus 22 ~~~r~~l~~~L~~~G~~~v~~a~~------g~---~al~~~~~~~~DlillD~~MP~md--------------G~-el~~ 77 (134)
T 3to5_A 22 STMRRIVKNLLRDLGFNNTQEADD------GL---TALPMLKKGDFDFVVTDWNMPGMQ--------------GI-DLLK 77 (134)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEESS------HH---HHHHHHHHHCCSEEEEESCCSSSC--------------HH-HHHH
T ss_pred HHHHHHHHHHHHHcCCcEEEEECC------HH---HHHHHHHhCCCCEEEEcCCCCCCC--------------HH-HHHH
Confidence 333444557777788775544421 10 001111223456666665 34322 11 2334
Q ss_pred HHH-----hCCceeccccccchhhhhHhhhcceeeeEEeccccCHHHHHHHHHHHHh
Q 011848 377 SIV-----AGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMV 428 (476)
Q Consensus 377 al~-----~GvP~l~~P~~~DQ~~na~r~~e~~G~g~~~~~~~~~~~l~~ai~~~l~ 428 (476)
.+. ..+|++++--..+.. ...+.. ++|+--.+.|.++.++|.++|++++.
T Consensus 78 ~ir~~~~~~~ipvI~lTa~~~~~-~~~~~~-~~Ga~~yl~KP~~~~~L~~~i~~~l~ 132 (134)
T 3to5_A 78 NIRADEELKHLPVLMITAEAKRE-QIIEAA-QAGVNGYIVKPFTAATLKEKLDKIFE 132 (134)
T ss_dssp HHHHSTTTTTCCEEEEESSCCHH-HHHHHH-HTTCCEEEESSCCHHHHHHHHHHHCC
T ss_pred HHHhCCCCCCCeEEEEECCCCHH-HHHHHH-HCCCCEEEECCCCHHHHHHHHHHHHh
Confidence 443 468888886555444 444552 57988888899999999999999874
No 427
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=28.52 E-value=67 Score=27.86 Aligned_cols=32 Identities=22% Similarity=0.236 Sum_probs=25.6
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 8 ~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
|+++++.++.| --.++++.|+++|++|.++.-
T Consensus 8 k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r 39 (249)
T 2ew8_A 8 KLAVITGGANG---IGRAIAERFAVEGADIAIADL 39 (249)
T ss_dssp CEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEcC
Confidence 67778876653 356899999999999998875
No 428
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=28.49 E-value=65 Score=27.74 Aligned_cols=32 Identities=25% Similarity=0.233 Sum_probs=22.7
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 8 ~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
|.++++.++ | .--..|++.|+++||+|+++.-
T Consensus 2 k~vlVtGas-g--~iG~~l~~~L~~~g~~V~~~~r 33 (255)
T 2dkn_A 2 SVIAITGSA-S--GIGAALKELLARAGHTVIGIDR 33 (255)
T ss_dssp CEEEEETTT-S--HHHHHHHHHHHHTTCEEEEEES
T ss_pred cEEEEeCCC-c--HHHHHHHHHHHhCCCEEEEEeC
Confidence 445555544 3 2356789999999999998864
No 429
>3qrx_B Melittin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 1bh1_A 2mlt_A
Probab=28.45 E-value=19 Score=18.62 Aligned_cols=18 Identities=22% Similarity=0.530 Sum_probs=14.7
Q ss_pred ChhHHHHHHHhCCceecc
Q 011848 370 GWNSTLESIVAGMPMICW 387 (476)
Q Consensus 370 G~gs~~eal~~GvP~l~~ 387 (476)
|.|++.-.+..|.|.++-
T Consensus 1 giGa~LKVLa~~LP~liS 18 (26)
T 3qrx_B 1 GIGAVLKVLTTGLPALIS 18 (26)
T ss_pred CchHHHHHHHccchHHHH
Confidence 678888999999987753
No 430
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=28.43 E-value=39 Score=32.83 Aligned_cols=32 Identities=22% Similarity=0.429 Sum_probs=26.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCc
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTE 43 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 43 (476)
|||.|+-.|..| +.+|..|+++||+|+++...
T Consensus 3 mkI~VIG~G~vG-----~~lA~~La~~G~~V~~~D~~ 34 (450)
T 3gg2_A 3 LDIAVVGIGYVG-----LVSATCFAELGANVRCIDTD 34 (450)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECcCHHH-----HHHHHHHHhcCCEEEEEECC
Confidence 699999776665 67899999999999988753
No 431
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}
Probab=28.40 E-value=51 Score=29.11 Aligned_cols=32 Identities=22% Similarity=0.221 Sum_probs=26.0
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 8 ~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
|+++++.++.| --.++|++|+++|++|.++.-
T Consensus 29 k~vlVTGas~g---IG~aia~~la~~G~~V~~~~r 60 (266)
T 3uxy_A 29 KVALVTGAAGG---IGGAVVTALRAAGARVAVADR 60 (266)
T ss_dssp CEEEESSTTSH---HHHHHHHHHHHTTCEEEECSS
T ss_pred CEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 78889888764 356899999999999887653
No 432
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=28.28 E-value=24 Score=32.26 Aligned_cols=32 Identities=13% Similarity=0.099 Sum_probs=24.0
Q ss_pred HhCcCCCCccccccChhHHHHHHHh----CCceecccc
Q 011848 356 VLAHSAVGGFLTHCGWNSTLESIVA----GMPMICWPS 389 (476)
Q Consensus 356 ll~~~~~~~~I~HgG~gs~~eal~~----GvP~l~~P~ 389 (476)
....+++ +|.-||=||+.+++.. ++|++.++.
T Consensus 72 ~~~~~d~--vi~~GGDGT~l~a~~~~~~~~~pvlgi~~ 107 (307)
T 1u0t_A 72 AADGCEL--VLVLGGDGTFLRAAELARNASIPVLGVNL 107 (307)
T ss_dssp ----CCC--EEEEECHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred cccCCCE--EEEEeCCHHHHHHHHHhccCCCCEEEEeC
Confidence 3345666 9999999999999865 889988863
No 433
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=28.12 E-value=45 Score=31.47 Aligned_cols=34 Identities=18% Similarity=0.220 Sum_probs=27.1
Q ss_pred CCccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 4 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
|.+.+|+|+-.|-. -+.+|..|+++|++|+++--
T Consensus 3 ~~~~~V~IVGaG~a-----Gl~~A~~L~~~G~~v~v~E~ 36 (397)
T 2vou_A 3 PTTDRIAVVGGSIS-----GLTAALMLRDAGVDVDVYER 36 (397)
T ss_dssp CCCSEEEEECCSHH-----HHHHHHHHHHTTCEEEEECS
T ss_pred CCCCcEEEECCCHH-----HHHHHHHHHhCCCCEEEEec
Confidence 34568998877644 47889999999999999964
No 434
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=28.04 E-value=59 Score=27.90 Aligned_cols=35 Identities=14% Similarity=0.164 Sum_probs=24.1
Q ss_pred ccEEEEEcCCCccCHHHHHHHHHHHHhCC-CEEEEEeCc
Q 011848 6 HVHVAILPLPAVGHVNSMLNLAELLGHAG-IKITFLNTE 43 (476)
Q Consensus 6 ~~~il~~~~~~~GH~~p~l~La~~L~~rG-H~Vt~~~~~ 43 (476)
|||.++++..+. - --..|++.|+++| |+|+.+.-.
T Consensus 22 ~mk~vlVtGatG-~--iG~~l~~~L~~~G~~~V~~~~R~ 57 (236)
T 3qvo_A 22 HMKNVLILGAGG-Q--IARHVINQLADKQTIKQTLFARQ 57 (236)
T ss_dssp CCEEEEEETTTS-H--HHHHHHHHHTTCTTEEEEEEESS
T ss_pred cccEEEEEeCCc-H--HHHHHHHHHHhCCCceEEEEEcC
Confidence 345555555433 2 3468899999999 999988753
No 435
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=28.01 E-value=81 Score=27.70 Aligned_cols=32 Identities=16% Similarity=0.135 Sum_probs=26.5
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 8 ~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
|+++++.++.| --.+++++|+++|++|.+...
T Consensus 11 k~~lVTGas~g---IG~aia~~l~~~G~~V~~~~r 42 (267)
T 3t4x_A 11 KTALVTGSTAG---IGKAIATSLVAEGANVLINGR 42 (267)
T ss_dssp CEEEETTCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 78888888764 356899999999999998875
No 436
>3r5x_A D-alanine--D-alanine ligase; alpha-beta structure, cytosol, structural genomics, for structural genomics of infectious diseases, csgid; HET: MSE ATP; 2.00A {Bacillus anthracis} PDB: 3r23_A*
Probab=28.00 E-value=44 Score=30.13 Aligned_cols=45 Identities=7% Similarity=0.043 Sum_probs=32.7
Q ss_pred ccEEEEEcCCCcc----CHHHHHHHHHHHHhCCCEEEEEeCccchhhHh
Q 011848 6 HVHVAILPLPAVG----HVNSMLNLAELLGHAGIKITFLNTEHYYDRVI 50 (476)
Q Consensus 6 ~~~il~~~~~~~G----H~~p~l~La~~L~~rGH~Vt~~~~~~~~~~~~ 50 (476)
+|||+++..+... -+.-...++++|.++||+|..+........+.
T Consensus 3 ~m~v~vl~gg~s~e~~vs~~s~~~v~~al~~~g~~v~~i~~~~~~~~~~ 51 (307)
T 3r5x_A 3 AMRIGVIMGGVSSEKQVSIMTGNEMIANLDKNKYEIVPITLNEKMDLIE 51 (307)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHHHHHSCTTTEEEEEEECSSGGGHHH
T ss_pred CcEEEEEeCCCCcchHhHHHHHHHHHHHHHHCCCEEEEEcccCchhHHH
Confidence 5799999876432 23456788999999999999998764333343
No 437
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=28.00 E-value=63 Score=28.72 Aligned_cols=41 Identities=12% Similarity=0.080 Sum_probs=31.9
Q ss_pred HHHHHHHHcCCCCceEEEecCCcc------cHHHHHHHhCCceEEEecc
Q 011848 99 PLLKEMVSDSKSPVNCIITDGYMS------RAIDAAREVGVSIIYFRTI 141 (476)
Q Consensus 99 ~~~~~ll~~~~~~~D~Ii~D~~~~------~~~~~A~~lgiP~v~~~~~ 141 (476)
..+..++++. +||+|++..-.. -+..+|+.||+|.++....
T Consensus 102 ~~La~~i~~~--~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt~v~~ 148 (264)
T 1o97_C 102 RILTEVIKKE--APDMVFAGVQSSDQAYASTGISVASYLNWPHAAVVAD 148 (264)
T ss_dssp HHHHHHHHHH--CCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEEE
T ss_pred HHHHHHHHhc--CCCEEEEcCCccCCchhhHHHHHHHHhCCCcccceEE
Confidence 4456667765 899999876553 6999999999999987654
No 438
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=27.91 E-value=45 Score=32.45 Aligned_cols=34 Identities=24% Similarity=0.363 Sum_probs=27.9
Q ss_pred CCccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 4 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
+.++||.|+-.|.+| ..+|..|+++||+|+++..
T Consensus 35 ~~~~kV~VIGaG~MG-----~~iA~~la~~G~~V~l~D~ 68 (463)
T 1zcj_A 35 QPVSSVGVLGLGTMG-----RGIAISFARVGISVVAVES 68 (463)
T ss_dssp CCCCEEEEECCSHHH-----HHHHHHHHTTTCEEEEECS
T ss_pred CCCCEEEEECcCHHH-----HHHHHHHHhCCCeEEEEEC
Confidence 346799999888777 4578899999999999865
No 439
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=27.82 E-value=64 Score=28.37 Aligned_cols=32 Identities=16% Similarity=0.249 Sum_probs=26.7
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 8 ~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
|+++++.++.| --.++++.|+++|++|.++.-
T Consensus 21 k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r 52 (266)
T 4egf_A 21 KRALITGATKG---IGADIARAFAAAGARLVLSGR 52 (266)
T ss_dssp CEEEETTTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 78888888764 456899999999999988875
No 440
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=27.82 E-value=39 Score=32.59 Aligned_cols=32 Identities=19% Similarity=0.298 Sum_probs=25.7
Q ss_pred CccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 5 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
.+|||.|+-.|..| +.+|..|++ ||+|+.+..
T Consensus 35 ~~mkIaVIGlG~mG-----~~lA~~La~-G~~V~~~D~ 66 (432)
T 3pid_A 35 EFMKITISGTGYVG-----LSNGVLIAQ-NHEVVALDI 66 (432)
T ss_dssp CCCEEEEECCSHHH-----HHHHHHHHT-TSEEEEECS
T ss_pred CCCEEEEECcCHHH-----HHHHHHHHc-CCeEEEEec
Confidence 46899999877766 456778887 999999875
No 441
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=27.63 E-value=70 Score=28.24 Aligned_cols=33 Identities=24% Similarity=0.337 Sum_probs=27.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
.|+++++.++.| --.++|+.|+++|++|.++..
T Consensus 11 ~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r 43 (271)
T 3tzq_B 11 NKVAIITGACGG---IGLETSRVLARAGARVVLADL 43 (271)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEcC
Confidence 378888888764 356899999999999988875
No 442
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=27.62 E-value=91 Score=27.89 Aligned_cols=34 Identities=12% Similarity=-0.019 Sum_probs=27.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCc
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTE 43 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 43 (476)
.|+++++.++.| --.++|++|+++|++|.+....
T Consensus 49 ~k~vlVTGas~G---IG~aia~~la~~G~~V~~~~~~ 82 (294)
T 3r3s_A 49 DRKALVTGGDSG---IGRAAAIAYAREGADVAINYLP 82 (294)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEECCG
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 378888888764 3578999999999999887653
No 443
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=27.58 E-value=28 Score=31.44 Aligned_cols=27 Identities=11% Similarity=0.063 Sum_probs=0.0
Q ss_pred CCCCccccccChhHHHHHHHh----CCceeccc
Q 011848 360 SAVGGFLTHCGWNSTLESIVA----GMPMICWP 388 (476)
Q Consensus 360 ~~~~~~I~HgG~gs~~eal~~----GvP~l~~P 388 (476)
+++ +|.=||=||+.+++.. ++|++.++
T Consensus 64 ~D~--vi~~GGDGT~l~a~~~~~~~~~P~lGI~ 94 (292)
T 2an1_A 64 ADL--AVVVGGDGNMLGAARTLARYDINVIGIN 94 (292)
T ss_dssp CSE--EEECSCHHHHHHHHHHHTTSSCEEEEBC
T ss_pred CCE--EEEEcCcHHHHHHHHHhhcCCCCEEEEE
No 444
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=27.56 E-value=59 Score=23.96 Aligned_cols=46 Identities=7% Similarity=-0.009 Sum_probs=33.5
Q ss_pred hCCceeccccccchhhhhHhhhcceeeeEEeccccCHHHHHHHHHHHHh
Q 011848 380 AGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMV 428 (476)
Q Consensus 380 ~GvP~l~~P~~~DQ~~na~r~~e~~G~g~~~~~~~~~~~l~~ai~~~l~ 428 (476)
..+|++++ .. +......+.. +.|+--.+.+.++.++|.++|++++.
T Consensus 79 ~~~~ii~~-~~-~~~~~~~~~~-~~g~~~~l~kp~~~~~l~~~i~~~~~ 124 (127)
T 2gkg_A 79 KNVPIVII-GN-PDGFAQHRKL-KAHADEYVAKPVDADQLVERAGALIG 124 (127)
T ss_dssp TTSCEEEE-EC-GGGHHHHHHS-TTCCSEEEESSCCHHHHHHHHHHHHC
T ss_pred cCCCEEEE-ec-CCchhHHHHH-HhCcchheeCCCCHHHHHHHHHHHHc
Confidence 46899888 43 3444444553 56876677788999999999998875
No 445
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=27.53 E-value=32 Score=30.53 Aligned_cols=38 Identities=11% Similarity=-0.012 Sum_probs=26.9
Q ss_pred CCccEEEEEcCCCccCHH--HHHHHHHHHHhCCCEEEEEeCccc
Q 011848 4 QDHVHVAILPLPAVGHVN--SMLNLAELLGHAGIKITFLNTEHY 45 (476)
Q Consensus 4 ~~~~~il~~~~~~~GH~~--p~l~La~~L~~rGH~Vt~~~~~~~ 45 (476)
+.|.|||++- ||-. -.-.|.+.|.+.|++|+++.....
T Consensus 2 ~~m~~vLiV~----g~~~~~~a~~l~~aL~~~g~~V~~i~~~~~ 41 (259)
T 3rht_A 2 NAMTRVLYCG----DTSLETAAGYLAGLMTSWQWEFDYIPSHVG 41 (259)
T ss_dssp ----CEEEEE----SSCTTTTHHHHHHHHHHTTCCCEEECTTSC
T ss_pred CCCceEEEEC----CCCchhHHHHHHHHHHhCCceEEEeccccc
Confidence 4577999993 6644 356688889999999999997654
No 446
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=27.45 E-value=75 Score=28.53 Aligned_cols=33 Identities=24% Similarity=0.197 Sum_probs=27.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
.|+++++.++.| --.++|+.|+++|++|.++..
T Consensus 28 gk~~lVTGas~G---IG~aia~~la~~G~~V~~~~~ 60 (299)
T 3t7c_A 28 GKVAFITGAARG---QGRSHAITLAREGADIIAIDV 60 (299)
T ss_dssp TCEEEEESTTSH---HHHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEec
Confidence 388899988774 457899999999999998764
No 447
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=27.34 E-value=81 Score=27.86 Aligned_cols=33 Identities=24% Similarity=0.120 Sum_probs=26.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
.|+++++.++.| --.++|+.|+++|++|.++..
T Consensus 28 ~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~r 60 (270)
T 3ftp_A 28 KQVAIVTGASRG---IGRAIALELARRGAMVIGTAT 60 (270)
T ss_dssp TCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 378888887763 357899999999999988875
No 448
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=27.29 E-value=72 Score=27.93 Aligned_cols=33 Identities=21% Similarity=0.170 Sum_probs=26.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
.|+++++.++.| =-.++++.|+++|++|.++.-
T Consensus 7 ~k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r 39 (262)
T 1zem_A 7 GKVCLVTGAGGN---IGLATALRLAEEGTAIALLDM 39 (262)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 367778877653 356899999999999998865
No 449
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=27.21 E-value=1.2e+02 Score=28.22 Aligned_cols=42 Identities=7% Similarity=0.200 Sum_probs=24.0
Q ss_pred CCCCCccEEEEEcCCCccC--HHHHHHHHHHHHhC-CCEEEEEeC
Q 011848 1 MEKQDHVHVAILPLPAVGH--VNSMLNLAELLGHA-GIKITFLNT 42 (476)
Q Consensus 1 m~~~~~~~il~~~~~~~GH--~~p~l~La~~L~~r-GH~Vt~~~~ 42 (476)
|.+|++.||+++-.|..|. +..+..+...+... +.+|+-++.
T Consensus 20 ~~~MkkirvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d 64 (393)
T 4fb5_A 20 FQSMKPLGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAE 64 (393)
T ss_dssp ----CCCEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEEC
T ss_pred ccCCCCccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEEC
Confidence 4568889999999887663 33444444444332 567666654
No 450
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=27.20 E-value=3.1e+02 Score=23.90 Aligned_cols=37 Identities=14% Similarity=0.168 Sum_probs=24.5
Q ss_pred HHHHHHcCCCCceEEEecCCccc----HHHHHHHhCCceEEEec
Q 011848 101 LKEMVSDSKSPVNCIITDGYMSR----AIDAAREVGVSIIYFRT 140 (476)
Q Consensus 101 ~~~ll~~~~~~~D~Ii~D~~~~~----~~~~A~~lgiP~v~~~~ 140 (476)
++.++.. ++|.||....... ....+...|||+|.+..
T Consensus 54 i~~l~~~---~vdgiii~~~~~~~~~~~~~~~~~~giPvV~~~~ 94 (297)
T 3rot_A 54 IESALAT---YPSGIATTIPSDTAFSKSLQRANKLNIPVIAVDT 94 (297)
T ss_dssp HHHHHHT---CCSEEEECCCCSSTTHHHHHHHHHHTCCEEEESC
T ss_pred HHHHHHc---CCCEEEEeCCCHHHHHHHHHHHHHCCCCEEEEcC
Confidence 4445554 8999997655432 34456677999999743
No 451
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=27.17 E-value=79 Score=26.50 Aligned_cols=36 Identities=14% Similarity=0.157 Sum_probs=30.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
..++++.++..|+-.-+..+++.|+++|+.|...-.
T Consensus 32 ~p~vv~~HG~~g~~~~~~~~~~~l~~~G~~v~~~d~ 67 (241)
T 3f67_A 32 LPIVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPEL 67 (241)
T ss_dssp EEEEEEECCTTCSCHHHHHHHHHHHHTTCEEEEECT
T ss_pred CCEEEEEcCcCccCHHHHHHHHHHHHCCcEEEEecc
Confidence 457888888888888899999999999999887765
No 452
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=27.13 E-value=52 Score=28.67 Aligned_cols=33 Identities=18% Similarity=0.225 Sum_probs=26.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
.|+++++.++.| --.++++.|+++|++|.++.-
T Consensus 7 ~k~~lVTGas~G---IG~aia~~l~~~G~~V~~~~r 39 (250)
T 3nyw_A 7 KGLAIITGASQG---IGAVIAAGLATDGYRVVLIAR 39 (250)
T ss_dssp CCEEEEESTTSH---HHHHHHHHHHHHTCEEEEEES
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEEC
Confidence 478888887764 346899999999999988864
No 453
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=27.05 E-value=66 Score=28.31 Aligned_cols=34 Identities=18% Similarity=0.168 Sum_probs=27.1
Q ss_pred ccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 6 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
+.|+++++.++.| --.++++.|+++|++|.+...
T Consensus 24 ~~k~vlITGas~g---IG~~~a~~l~~~G~~v~~~~~ 57 (269)
T 3gk3_A 24 AKRVAFVTGGMGG---LGAAISRRLHDAGMAVAVSHS 57 (269)
T ss_dssp CCCEEEETTTTSH---HHHHHHHHHHTTTCEEEEEEC
T ss_pred cCCEEEEECCCch---HHHHHHHHHHHCCCEEEEEcC
Confidence 3488889887753 346889999999999998874
No 454
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=26.94 E-value=77 Score=26.65 Aligned_cols=33 Identities=15% Similarity=0.225 Sum_probs=23.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCc
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTE 43 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 43 (476)
|||++. |+.|.+ -..|+++|.++||+|+.++-.
T Consensus 1 MkilVt--GatG~i--G~~l~~~L~~~g~~V~~~~R~ 33 (224)
T 3h2s_A 1 MKIAVL--GATGRA--GSAIVAEARRRGHEVLAVVRD 33 (224)
T ss_dssp CEEEEE--TTTSHH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEE--cCCCHH--HHHHHHHHHHCCCEEEEEEec
Confidence 465554 333433 468899999999999999853
No 455
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=26.85 E-value=83 Score=26.34 Aligned_cols=37 Identities=11% Similarity=0.222 Sum_probs=27.7
Q ss_pred cEEEEEcCCCcc----CHHHHHHHHHHHHhCCCEEEEEeCc
Q 011848 7 VHVAILPLPAVG----HVNSMLNLAELLGHAGIKITFLNTE 43 (476)
Q Consensus 7 ~~il~~~~~~~G----H~~p~l~La~~L~~rGH~Vt~~~~~ 43 (476)
.+|.+++....| +..-...|++.|+++|+.|..-..+
T Consensus 2 ~~V~V~gss~~~~~~~~~~~A~~lg~~La~~g~~lV~GGg~ 42 (191)
T 1t35_A 2 KTICVFAGSNPGGNEAYKRKAAELGVYMAEQGIGLVYGGSR 42 (191)
T ss_dssp CEEEEECCSSCCSSTHHHHHHHHHHHHHHHTTCEEEECCCC
T ss_pred CEEEEEECCCCCCChHHHHHHHHHHHHHHHCCCEEEECCCc
Confidence 368888877644 3446788899999999998777654
No 456
>1yio_A Response regulatory protein; transcription regulation, DNA binding protein; 2.20A {Pseudomonas fluorescens} SCOP: a.4.6.2 c.23.1.1 PDB: 1zn2_A
Probab=26.83 E-value=2.6e+02 Score=22.81 Aligned_cols=48 Identities=8% Similarity=-0.009 Sum_probs=34.7
Q ss_pred hCCceeccccccchhhhhHhhhcceeeeEEeccccCHHHHHHHHHHHHhH
Q 011848 380 AGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMVE 429 (476)
Q Consensus 380 ~GvP~l~~P~~~DQ~~na~r~~e~~G~g~~~~~~~~~~~l~~ai~~~l~~ 429 (476)
.++|++++-...|.. ...++. +.|+--.+.+.++.++|..+|+.++..
T Consensus 75 ~~~~ii~ls~~~~~~-~~~~a~-~~Ga~~~l~Kp~~~~~L~~~i~~~~~~ 122 (208)
T 1yio_A 75 DGIPIVFITAHGDIP-MTVRAM-KAGAIEFLPKPFEEQALLDAIEQGLQL 122 (208)
T ss_dssp CCCCEEEEESCTTSC-CCHHHH-HTTEEEEEESSCCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHH-HHHHHH-HCCCcEEEeCCCCHHHHHHHHHHHHhh
Confidence 368888876555433 344442 468877777889999999999999874
No 457
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=26.81 E-value=79 Score=25.37 Aligned_cols=38 Identities=16% Similarity=0.232 Sum_probs=28.8
Q ss_pred cEEEEEcCCCccCHHHHH-HHHHHHHhCCCEEEEEeCcc
Q 011848 7 VHVAILPLPAVGHVNSML-NLAELLGHAGIKITFLNTEH 44 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l-~La~~L~~rGH~Vt~~~~~~ 44 (476)
|||+++-...+|+..-+. .|++.|.+.|++|.++....
T Consensus 1 Mkv~IvY~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~~ 39 (161)
T 3hly_A 1 MSVLIGYLSDYGYSDRLSQAIGRGLVKTGVAVEMVDLRA 39 (161)
T ss_dssp -CEEEEECTTSTTHHHHHHHHHHHHHHTTCCEEEEETTT
T ss_pred CEEEEEEECCChHHHHHHHHHHHHHHhCCCeEEEEECCC
Confidence 477777777789987654 57888999999998887543
No 458
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=26.81 E-value=75 Score=28.21 Aligned_cols=33 Identities=24% Similarity=0.176 Sum_probs=27.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
.|+++++.++.| --.++|+.|+++|++|.++.-
T Consensus 11 ~k~~lVTGas~g---IG~aia~~la~~G~~V~~~~~ 43 (286)
T 3uve_A 11 GKVAFVTGAARG---QGRSHAVRLAQEGADIIAVDI 43 (286)
T ss_dssp TCEEEEESTTSH---HHHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEeCCCch---HHHHHHHHHHHCCCeEEEEec
Confidence 388899988875 357899999999999998864
No 459
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=26.79 E-value=60 Score=24.34 Aligned_cols=38 Identities=8% Similarity=0.009 Sum_probs=25.9
Q ss_pred CCccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEe
Q 011848 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLN 41 (476)
Q Consensus 4 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~ 41 (476)
.++|||+++|..+.+--.-.-.+-++..++|.+|.+..
T Consensus 4 ~~~mkIlL~C~aGmSTsllv~km~~~a~~~gi~v~i~a 41 (108)
T 3nbm_A 4 SKELKVLVLCAGSGTSAQLANAINEGANLTEVRVIANS 41 (108)
T ss_dssp -CCEEEEEEESSSSHHHHHHHHHHHHHHHHTCSEEEEE
T ss_pred ccCceEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEE
Confidence 35779999998877554444455555556799988865
No 460
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=26.79 E-value=73 Score=29.94 Aligned_cols=33 Identities=9% Similarity=0.138 Sum_probs=26.5
Q ss_pred ccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCc
Q 011848 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTE 43 (476)
Q Consensus 6 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 43 (476)
.++|+++-.|.. -+..|..|+++||+|+++-..
T Consensus 3 ~~~v~iiG~G~~-----Gl~~A~~l~~~g~~v~v~E~~ 35 (384)
T 2bi7_A 3 SKKILIVGAGFS-----GAVIGRQLAEKGHQVHIIDQR 35 (384)
T ss_dssp CCEEEEECCSHH-----HHHHHHHHHTTTCEEEEEESS
T ss_pred cCCEEEECcCHH-----HHHHHHHHHHCCCcEEEEEec
Confidence 358888876643 578899999999999999753
No 461
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=26.79 E-value=1.7e+02 Score=26.93 Aligned_cols=124 Identities=13% Similarity=0.027 Sum_probs=62.7
Q ss_pred ceEEEEecccccCCHHHHHHHHHHHhhC-CCcEEEEEcCCCCCCCCCCCCCchHHHHHhcCCceeeeccCHHHHhCcCCC
Q 011848 284 SVIYVSFGSIAVMSRDQLIEFYYGLVHS-KKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAV 362 (476)
Q Consensus 284 ~~V~vs~Gs~~~~~~~~~~~~~~al~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~vp~~~ll~~~~~ 362 (476)
++.+|.+|.+. ...+.++.+. +..++.++..+ . .-...+.++. ++. .+-...+++...++
T Consensus 7 ~vgiiG~G~~g-------~~~~~~l~~~~~~~lvav~d~~-------~-~~~~~~~~~~--g~~--~~~~~~~~l~~~~~ 67 (354)
T 3db2_A 7 GVAAIGLGRWA-------YVMADAYTKSEKLKLVTCYSRT-------E-DKREKFGKRY--NCA--GDATMEALLAREDV 67 (354)
T ss_dssp EEEEECCSHHH-------HHHHHHHTTCSSEEEEEEECSS-------H-HHHHHHHHHH--TCC--CCSSHHHHHHCSSC
T ss_pred eEEEEccCHHH-------HHHHHHHHhCCCcEEEEEECCC-------H-HHHHHHHHHc--CCC--CcCCHHHHhcCCCC
Confidence 46778888765 3456667665 55666565421 0 0011111111 222 25567788854444
Q ss_pred CccccccC----hhHHHHHHHhCCceec-cccc--cchhhhhHhhhcceeeeEEec--cccCHHHHHHHHHHHHh
Q 011848 363 GGFLTHCG----WNSTLESIVAGMPMIC-WPSF--ADQQINSRFVGEVWKLGLDIK--DLCDRNIVEKAVNDLMV 428 (476)
Q Consensus 363 ~~~I~HgG----~gs~~eal~~GvP~l~-~P~~--~DQ~~na~r~~e~~G~g~~~~--~~~~~~~l~~ai~~~l~ 428 (476)
.+++---- .-.+.+|+.+|+++++ -|+. .+|-.-...++++.|+-+.+. .++++ ..+.+++++.
T Consensus 68 D~V~i~tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~R~~p--~~~~~k~~i~ 140 (354)
T 3db2_A 68 EMVIITVPNDKHAEVIEQCARSGKHIYVEKPISVSLDHAQRIDQVIKETGVKFLCGHSSRRLG--ALRKMKEMID 140 (354)
T ss_dssp CEEEECSCTTSHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHHCCCEEEECGGGGSH--HHHHHHHHHH
T ss_pred CEEEEeCChHHHHHHHHHHHHcCCEEEEccCCCCCHHHHHHHHHHHHHcCCeEEEeechhcCH--HHHHHHHHHh
Confidence 34543222 3456788999998876 3543 344443333335566665555 34443 2334444444
No 462
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=26.74 E-value=69 Score=28.32 Aligned_cols=33 Identities=18% Similarity=0.024 Sum_probs=26.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
.|+++++.++.| --.++++.|+++|++|.++..
T Consensus 5 ~k~vlVTGas~g---IG~~~a~~l~~~G~~V~~~~r 37 (281)
T 3m1a_A 5 AKVWLVTGASSG---FGRAIAEAAVAAGDTVIGTAR 37 (281)
T ss_dssp CCEEEETTTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CcEEEEECCCCh---HHHHHHHHHHHCCCEEEEEeC
Confidence 478888887653 356889999999999988875
No 463
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=26.68 E-value=81 Score=27.28 Aligned_cols=33 Identities=18% Similarity=0.156 Sum_probs=27.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
.|+++++.++.| --.++++.|+++|++|.+...
T Consensus 7 ~k~vlITGas~g---IG~~~a~~l~~~G~~v~~~~~ 39 (255)
T 3icc_A 7 GKVALVTGASRG---IGRAIAKRLANDGALVAIHYG 39 (255)
T ss_dssp TCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCh---HHHHHHHHHHHCCCeEEEEeC
Confidence 388899988875 467899999999999988754
No 464
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=26.63 E-value=68 Score=28.02 Aligned_cols=32 Identities=16% Similarity=0.237 Sum_probs=26.4
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 8 ~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
|+++++.++.| --.++++.|+++|++|.++.-
T Consensus 7 k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r 38 (257)
T 3imf_A 7 KVVIITGGSSG---MGKGMATRFAKEGARVVITGR 38 (257)
T ss_dssp CEEEETTTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCH---HHHHHHHHHHHCCCEEEEEeC
Confidence 78888888764 457899999999999988764
No 465
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=26.60 E-value=52 Score=27.02 Aligned_cols=32 Identities=13% Similarity=0.054 Sum_probs=24.3
Q ss_pred EEEEEcCCCccCHHH-HHHHHHHHHhCCCEEEEEeC
Q 011848 8 HVAILPLPAVGHVNS-MLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 8 ~il~~~~~~~GH~~p-~l~La~~L~~rGH~Vt~~~~ 42 (476)
++++++..+. |+ .+.+|++++++||.|..+|+
T Consensus 80 ~vii~S~Sg~---n~~~ie~A~~ake~G~~vIaITs 112 (170)
T 3jx9_A 80 RVLIFTPDTE---RSDLLASLARYDAWHTPYSIITL 112 (170)
T ss_dssp EEEEEESCSC---CHHHHHHHHHHHHHTCCEEEEES
T ss_pred EEEEEeCCCC---CHHHHHHHHHHHHCCCcEEEEeC
Confidence 3444444333 44 78999999999999999998
No 466
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=26.53 E-value=60 Score=29.91 Aligned_cols=33 Identities=15% Similarity=-0.014 Sum_probs=23.6
Q ss_pred ccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 6 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
+++|++. |+.|.+ -..|++.|.++||+|+.+.-
T Consensus 9 ~~~vlVt--GatG~i--G~~l~~~L~~~g~~V~~~~r 41 (357)
T 1rkx_A 9 GKRVFVT--GHTGFK--GGWLSLWLQTMGATVKGYSL 41 (357)
T ss_dssp TCEEEEE--TTTSHH--HHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEE--CCCchH--HHHHHHHHHhCCCeEEEEeC
Confidence 4566554 444444 46788999999999999875
No 467
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=26.51 E-value=49 Score=31.34 Aligned_cols=37 Identities=14% Similarity=0.148 Sum_probs=27.0
Q ss_pred CCCCC-ccEEEEEcCCCccCHHHHHHHHHHHHhC-CCEEEEEeC
Q 011848 1 MEKQD-HVHVAILPLPAVGHVNSMLNLAELLGHA-GIKITFLNT 42 (476)
Q Consensus 1 m~~~~-~~~il~~~~~~~GH~~p~l~La~~L~~r-GH~Vt~~~~ 42 (476)
|.+|. +.+|+++-.|. .-+..|..|+++ |++|+++--
T Consensus 1 m~~m~~~~~v~IiGaG~-----~Gl~aA~~L~~~~g~~v~v~E~ 39 (399)
T 1v0j_A 1 MQPMTARFDLFVVGSGF-----FGLTIAERVATQLDKRVLVLER 39 (399)
T ss_dssp ---CCCSCSEEEECCSH-----HHHHHHHHHHHHSCCCEEEECS
T ss_pred CCcccccCCEEEECCCH-----HHHHHHHHHHHhCCCCEEEEeC
Confidence 66664 56898887764 357889999999 999999964
No 468
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=26.50 E-value=66 Score=27.69 Aligned_cols=32 Identities=16% Similarity=0.093 Sum_probs=25.6
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 8 ~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
|+++++.++.| --.++++.|+++|++|.++.-
T Consensus 4 k~vlVTGas~G---IG~a~a~~l~~~G~~V~~~~r 35 (235)
T 3l6e_A 4 GHIIVTGAGSG---LGRALTIGLVERGHQVSMMGR 35 (235)
T ss_dssp CEEEEESTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCH---HHHHHHHHHHHCCCEEEEEEC
Confidence 67778877664 356889999999999988875
No 469
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=26.48 E-value=1.1e+02 Score=26.26 Aligned_cols=32 Identities=22% Similarity=0.214 Sum_probs=24.7
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 8 ~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
|+++++..+. .--..+++.|+++||+|+++..
T Consensus 8 ~~vlVtGasg---giG~~la~~l~~~G~~V~~~~r 39 (248)
T 2pnf_A 8 KVSLVTGSTR---GIGRAIAEKLASAGSTVIITGT 39 (248)
T ss_dssp CEEEETTCSS---HHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCc---hHHHHHHHHHHHCCCEEEEEeC
Confidence 6777776654 2356789999999999998875
No 470
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=26.46 E-value=56 Score=29.85 Aligned_cols=34 Identities=24% Similarity=0.259 Sum_probs=26.8
Q ss_pred CccEEEEEcCCCccCHHHHHHHHHHHHhCCC--EEEEEeCc
Q 011848 5 DHVHVAILPLPAVGHVNSMLNLAELLGHAGI--KITFLNTE 43 (476)
Q Consensus 5 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGH--~Vt~~~~~ 43 (476)
.++||+|+-.|..| ..+|+.|+++|| +|+++...
T Consensus 32 ~~~kI~IIG~G~mG-----~slA~~l~~~G~~~~V~~~dr~ 67 (314)
T 3ggo_A 32 SMQNVLIVGVGFMG-----GSFAKSLRRSGFKGKIYGYDIN 67 (314)
T ss_dssp SCSEEEEESCSHHH-----HHHHHHHHHTTCCSEEEEECSC
T ss_pred CCCEEEEEeeCHHH-----HHHHHHHHhCCCCCEEEEEECC
Confidence 34799999877766 468899999999 88877653
No 471
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=26.45 E-value=41 Score=31.95 Aligned_cols=37 Identities=24% Similarity=0.255 Sum_probs=28.0
Q ss_pred CCCCCccEEEEEcCCCccCHHHHHHHHHHHHhCC-CEEEEEeC
Q 011848 1 MEKQDHVHVAILPLPAVGHVNSMLNLAELLGHAG-IKITFLNT 42 (476)
Q Consensus 1 m~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rG-H~Vt~~~~ 42 (476)
|..++.++|+++-.|.. -+..|..|+++| |+|+++--
T Consensus 1 M~~~~~~~v~IIGaG~a-----Gl~aA~~L~~~g~~~v~v~E~ 38 (424)
T 2b9w_A 1 MSISKDSRIAIIGAGPA-----GLAAGMYLEQAGFHDYTILER 38 (424)
T ss_dssp -CCCTTCCEEEECCSHH-----HHHHHHHHHHTTCCCEEEECS
T ss_pred CCCCCCCCEEEECcCHH-----HHHHHHHHHhCCCCcEEEEEC
Confidence 55444568998877644 478899999999 99999864
No 472
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=26.41 E-value=72 Score=28.16 Aligned_cols=32 Identities=9% Similarity=0.196 Sum_probs=25.5
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 8 ~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
|+++++.++.| --.++++.|+++|++|.++.-
T Consensus 10 k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r 41 (270)
T 1yde_A 10 KVVVVTGGGRG---IGAGIVRAFVNSGARVVICDK 41 (270)
T ss_dssp CEEEEETCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 77788877653 356889999999999998864
No 473
>2w84_A Peroxisomal membrane protein PEX14; zellweger syndrome, alternative splicing, phosphoprotein, protein complex, disease mutation, peroxisome; NMR {Homo sapiens} PDB: 2w85_A
Probab=26.36 E-value=43 Score=22.82 Aligned_cols=50 Identities=10% Similarity=0.026 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHhc
Q 011848 416 RNIVEKAVNDLMVERKEEFMESADRMANLAKKSVNKGGSSYCNLDRLVNDIKMMS 470 (476)
Q Consensus 416 ~~~l~~ai~~~l~~~~~~~~~~a~~l~~~~~~~~~~~g~~~~~~~~~i~~l~~~~ 470 (476)
.+++.+.-.+.|+| ++++..-..=+..|... +|-...+++++++......
T Consensus 14 Re~li~~Av~FLqd--p~V~~sp~~~K~~FL~s---KGLt~eEI~~Al~ra~~~~ 63 (70)
T 2w84_A 14 REPLIATAVKFLQN--SRVRQSPLATRRAFLKK---KGLTDEEIDMAFQQSGTAA 63 (70)
T ss_dssp CHHHHHHHHHHHCS--TTGGGSCHHHHHHHHHH---TTCCHHHHHHHHHHHTCCC
T ss_pred hHHHHHHHHHHhCC--hhhhhCCHHHHHHHHHH---cCCCHHHHHHHHHHccCCC
Confidence 34454444567888 89998887777888887 9998999998888754433
No 474
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=26.31 E-value=77 Score=28.04 Aligned_cols=34 Identities=15% Similarity=0.090 Sum_probs=27.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCc
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTE 43 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 43 (476)
.|+++++.++.| =-.++|+.|+++|++|.++...
T Consensus 31 gk~~lVTGas~G---IG~aia~~la~~G~~V~~~~r~ 64 (273)
T 3uf0_A 31 GRTAVVTGAGSG---IGRAIAHGYARAGAHVLAWGRT 64 (273)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEcCH
Confidence 378888888764 4568999999999999988744
No 475
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=26.24 E-value=22 Score=31.52 Aligned_cols=52 Identities=13% Similarity=0.181 Sum_probs=36.8
Q ss_pred cCCCCccccccChhHHHHHHHh---CCceeccccccchhhhhHhhhcceeeeEEeccccCHHHHHHHHHHHHh
Q 011848 359 HSAVGGFLTHCGWNSTLESIVA---GMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMV 428 (476)
Q Consensus 359 ~~~~~~~I~HgG~gs~~eal~~---GvP~l~~P~~~DQ~~na~r~~e~~G~g~~~~~~~~~~~l~~ai~~~l~ 428 (476)
.+++ +|+=||=||+.+++.. ++|++.++.. .+|.- ..+.++++.++++++++
T Consensus 41 ~~D~--vv~~GGDGTll~~a~~~~~~~PilGIn~G------------~~Gfl----~~~~~~~~~~al~~i~~ 95 (258)
T 1yt5_A 41 TADL--IVVVGGDGTVLKAAKKAADGTPMVGFKAG------------RLGFL----TSYTLDEIDRFLEDLRN 95 (258)
T ss_dssp CCSE--EEEEECHHHHHHHHTTBCTTCEEEEEESS------------SCCSS----CCBCGGGHHHHHHHHHT
T ss_pred CCCE--EEEEeCcHHHHHHHHHhCCCCCEEEEECC------------CCCcc----CcCCHHHHHHHHHHHHc
Confidence 3565 9999999999999887 7888877521 11221 13457788888888776
No 476
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=26.22 E-value=72 Score=27.83 Aligned_cols=33 Identities=18% Similarity=0.163 Sum_probs=25.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHh-CCCEEEEEeC
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGH-AGIKITFLNT 42 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~-rGH~Vt~~~~ 42 (476)
.|.++++.++.| --..+++.|++ +|++|+++.-
T Consensus 4 ~k~vlITGasgg---IG~~~a~~L~~~~g~~V~~~~r 37 (276)
T 1wma_A 4 IHVALVTGGNKG---IGLAIVRDLCRLFSGDVVLTAR 37 (276)
T ss_dssp CCEEEESSCSSH---HHHHHHHHHHHHSSSEEEEEES
T ss_pred CCEEEEeCCCcH---HHHHHHHHHHHhcCCeEEEEeC
Confidence 366777766543 35678999999 9999998875
No 477
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=26.21 E-value=70 Score=29.09 Aligned_cols=33 Identities=24% Similarity=0.300 Sum_probs=23.3
Q ss_pred ccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 6 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
.|+|++. |+.|.+ -..|++.|+++||+|+.+.-
T Consensus 20 ~~~vlVT--GasG~i--G~~l~~~L~~~g~~V~~~~r 52 (330)
T 2pzm_A 20 HMRILIT--GGAGCL--GSNLIEHWLPQGHEILVIDN 52 (330)
T ss_dssp CCEEEEE--TTTSHH--HHHHHHHHGGGTCEEEEEEC
T ss_pred CCEEEEE--CCCCHH--HHHHHHHHHHCCCEEEEEEC
Confidence 3566554 333433 46789999999999999875
No 478
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=26.17 E-value=41 Score=30.17 Aligned_cols=31 Identities=19% Similarity=0.341 Sum_probs=25.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
|||.|+-.|..|. .+++.|.+.||+|++...
T Consensus 1 m~i~iiG~G~mG~-----~~a~~l~~~g~~V~~~~~ 31 (296)
T 2gf2_A 1 MPVGFIGLGNMGN-----PMAKNLMKHGYPLIIYDV 31 (296)
T ss_dssp CCEEEECCSTTHH-----HHHHHHHHTTCCEEEECS
T ss_pred CeEEEEeccHHHH-----HHHHHHHHCCCEEEEEeC
Confidence 4899998888875 578889999999988764
No 479
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=26.14 E-value=30 Score=27.17 Aligned_cols=61 Identities=13% Similarity=0.006 Sum_probs=37.5
Q ss_pred hCCceeccccccchhhhhHhhhccee-eeEEeccccCHHHHHHHHHHHHhHhHHHHHHHHHHHHHH
Q 011848 380 AGMPMICWPSFADQQINSRFVGEVWK-LGLDIKDLCDRNIVEKAVNDLMVERKEEFMESADRMANL 444 (476)
Q Consensus 380 ~GvP~l~~P~~~DQ~~na~r~~e~~G-~g~~~~~~~~~~~l~~ai~~~l~~~~~~~~~~a~~l~~~ 444 (476)
..+|++++-...+.. ...... +.| +--.+.+.++.++|.++|++++.. ..+++..+++.+.
T Consensus 78 ~~~~ii~ls~~~~~~-~~~~~~-~~g~~~~~l~kP~~~~~L~~~i~~~~~~--~~~~~~~~~~~~~ 139 (154)
T 2rjn_A 78 PDIERVVISGYADAQ-ATIDAV-NRGKISRFLLKPWEDEDVFKVVEKGLQL--AFLREENLRLQEE 139 (154)
T ss_dssp TTSEEEEEECGGGHH-HHHHHH-HTTCCSEEEESSCCHHHHHHHHHHHHHH--HHHHHHTTSCCC-
T ss_pred CCCcEEEEecCCCHH-HHHHHH-hccchheeeeCCCCHHHHHHHHHHHHHH--HHHHHHHHHHHHH
Confidence 367887775544433 333332 345 655666889999999999999875 4454444433333
No 480
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=26.05 E-value=1.5e+02 Score=21.67 Aligned_cols=36 Identities=14% Similarity=0.181 Sum_probs=26.3
Q ss_pred CCccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCc
Q 011848 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTE 43 (476)
Q Consensus 4 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 43 (476)
|+|+||+++- .+-.-.-.|.+.|.+.|++|..+...
T Consensus 1 M~~~~ilivd----d~~~~~~~l~~~L~~~g~~v~~~~~~ 36 (127)
T 3i42_A 1 MSLQQALIVE----DYQAAAETFKELLEMLGFQADYVMSG 36 (127)
T ss_dssp -CCEEEEEEC----SCHHHHHHHHHHHHHTTEEEEEESSH
T ss_pred CCcceEEEEc----CCHHHHHHHHHHHHHcCCCEEEECCH
Confidence 4577898874 35556667888888899999877654
No 481
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=26.04 E-value=80 Score=28.71 Aligned_cols=33 Identities=15% Similarity=0.074 Sum_probs=26.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
.|+++++.++.| --.++|+.|+++|++|.++.-
T Consensus 27 gk~vlVTGas~G---IG~aia~~la~~G~~Vv~~~r 59 (322)
T 3qlj_A 27 GRVVIVTGAGGG---IGRAHALAFAAEGARVVVNDI 59 (322)
T ss_dssp TCEEEETTTTSH---HHHHHHHHHHHTTCEEEEECC
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 378889888763 356899999999999998854
No 482
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=26.03 E-value=67 Score=29.47 Aligned_cols=37 Identities=19% Similarity=-0.046 Sum_probs=24.2
Q ss_pred CCccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCcc
Q 011848 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEH 44 (476)
Q Consensus 4 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (476)
|.+++|++.- +.|. --..|+++|.++||+|+.++-..
T Consensus 8 M~~~~IlVtG--atG~--iG~~l~~~L~~~g~~V~~l~R~~ 44 (346)
T 3i6i_A 8 SPKGRVLIAG--ATGF--IGQFVATASLDAHRPTYILARPG 44 (346)
T ss_dssp ---CCEEEEC--TTSH--HHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCCCeEEEEC--CCcH--HHHHHHHHHHHCCCCEEEEECCC
Confidence 3445666653 3443 34578899999999999998643
No 483
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=25.99 E-value=35 Score=32.79 Aligned_cols=31 Identities=16% Similarity=0.275 Sum_probs=25.1
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCc
Q 011848 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTE 43 (476)
Q Consensus 8 ~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 43 (476)
+|+|+-.|-. -+.+|..|+++|++|+++-..
T Consensus 24 ~ViIVGaGpa-----Gl~~A~~La~~G~~V~viE~~ 54 (430)
T 3ihm_A 24 RIGIVGAGTA-----GLHLGLFLRQHDVDVTVYTDR 54 (430)
T ss_dssp EEEEECCHHH-----HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEECCcHH-----HHHHHHHHHHCCCeEEEEcCC
Confidence 7888766544 478999999999999999753
No 484
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=25.97 E-value=67 Score=27.54 Aligned_cols=32 Identities=9% Similarity=-0.005 Sum_probs=25.1
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 8 ~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
|+++++..+.| --.++++.|+++|++|+++.-
T Consensus 4 k~vlITGas~g---IG~~~a~~l~~~G~~V~~~~r 35 (236)
T 1ooe_A 4 GKVIVYGGKGA---LGSAILEFFKKNGYTVLNIDL 35 (236)
T ss_dssp EEEEEETTTSH---HHHHHHHHHHHTTEEEEEEES
T ss_pred CEEEEECCCcH---HHHHHHHHHHHCCCEEEEEec
Confidence 66777766653 457899999999999998865
No 485
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=25.94 E-value=87 Score=27.18 Aligned_cols=33 Identities=12% Similarity=0.105 Sum_probs=26.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 7 VHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 7 ~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
.|+++++.++.| =-.++++.|+++|++|.++.-
T Consensus 12 ~k~vlVTGas~g---IG~aia~~l~~~G~~V~~~~r 44 (252)
T 3f1l_A 12 DRIILVTGASDG---IGREAAMTYARYGATVILLGR 44 (252)
T ss_dssp TCEEEEESTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCCh---HHHHHHHHHHHCCCEEEEEeC
Confidence 378888888764 356889999999999988874
No 486
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=25.92 E-value=88 Score=28.45 Aligned_cols=35 Identities=26% Similarity=0.219 Sum_probs=23.5
Q ss_pred CCccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 4 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
.+||+|++.- +.|- --..|++.|.++||+|+.+.-
T Consensus 19 ~~~~~vlVTG--atG~--iG~~l~~~L~~~g~~V~~~~r 53 (333)
T 2q1w_A 19 SHMKKVFITG--ICGQ--IGSHIAELLLERGDKVVGIDN 53 (333)
T ss_dssp --CCEEEEET--TTSH--HHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCEEEEeC--CccH--HHHHHHHHHHHCCCEEEEEEC
Confidence 3566766553 3332 346789999999999999875
No 487
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=25.90 E-value=76 Score=23.72 Aligned_cols=46 Identities=9% Similarity=0.078 Sum_probs=32.1
Q ss_pred CCceeccccccchhhhhHhhhcceeeeEEeccccCHHHHHHHHHHHHhH
Q 011848 381 GMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMVE 429 (476)
Q Consensus 381 GvP~l~~P~~~DQ~~na~r~~e~~G~g~~~~~~~~~~~l~~ai~~~l~~ 429 (476)
.+|++++-...+... .+. .+.|+--.+.+.++.++|.++|++++..
T Consensus 77 ~~pii~~s~~~~~~~--~~~-~~~g~~~~l~KP~~~~~l~~~i~~~l~~ 122 (133)
T 3nhm_A 77 HIPVIFVSGYAPRTE--GPA-DQPVPDAYLVKPVKPPVLIAQLHALLAR 122 (133)
T ss_dssp TCCEEEEESCCC-------T-TSCCCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHhH--HHH-hhcCCceEEeccCCHHHHHHHHHHHHhh
Confidence 688888876555444 344 2467766677899999999999999984
No 488
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=25.90 E-value=69 Score=29.08 Aligned_cols=34 Identities=21% Similarity=0.147 Sum_probs=23.7
Q ss_pred ccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCc
Q 011848 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTE 43 (476)
Q Consensus 6 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~ 43 (476)
++||++. |+.|.+ -..|++.|.++||+|+.+.-.
T Consensus 14 ~~~vlVT--GatG~i--G~~l~~~L~~~g~~V~~~~r~ 47 (335)
T 1rpn_A 14 TRSALVT--GITGQD--GAYLAKLLLEKGYRVHGLVAR 47 (335)
T ss_dssp -CEEEEE--TTTSHH--HHHHHHHHHHTTCEEEEEECC
T ss_pred CCeEEEE--CCCChH--HHHHHHHHHHCCCeEEEEeCC
Confidence 4576654 333433 467899999999999998753
No 489
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=25.89 E-value=60 Score=29.56 Aligned_cols=37 Identities=16% Similarity=0.275 Sum_probs=28.9
Q ss_pred ccEEEEEcCCCccCHHH-HHHHHHHHHhCCCEEEEEeC
Q 011848 6 HVHVAILPLPAVGHVNS-MLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 6 ~~~il~~~~~~~GH~~p-~l~La~~L~~rGH~Vt~~~~ 42 (476)
|.||+++..+..++... ...+.+.|.++|++|.+...
T Consensus 4 m~ki~iI~n~~~~~~~~~~~~l~~~L~~~g~~v~~~~~ 41 (307)
T 1u0t_A 4 HRSVLLVVHTGRDEATETARRVEKVLGDNKIALRVLSA 41 (307)
T ss_dssp -CEEEEEESSSGGGGSHHHHHHHHHHHTTTCEEEEEC-
T ss_pred CCEEEEEEeCCCHHHHHHHHHHHHHHHHCCCEEEEecc
Confidence 45899999998887644 66788999999999887654
No 490
>1qo0_D AMIR; binding protein, gene regulator, receptor; 2.25A {Pseudomonas aeruginosa} SCOP: c.23.1.3
Probab=25.87 E-value=2.6e+02 Score=22.54 Aligned_cols=53 Identities=6% Similarity=-0.086 Sum_probs=36.0
Q ss_pred HHHHHH---hCCceeccccccchhhhhHhhhcceeeeEEeccccCHHHHHHHHHHHHh
Q 011848 374 TLESIV---AGMPMICWPSFADQQINSRFVGEVWKLGLDIKDLCDRNIVEKAVNDLMV 428 (476)
Q Consensus 374 ~~eal~---~GvP~l~~P~~~DQ~~na~r~~e~~G~g~~~~~~~~~~~l~~ai~~~l~ 428 (476)
+.+.+. ..+|+|++--..|. ..+..+. +.|+--.+.+.++.++|..+|+.++.
T Consensus 69 l~~~~~~~~~~~~ii~lt~~~~~-~~~~~a~-~~ga~~~l~KP~~~~~L~~~l~~~~~ 124 (196)
T 1qo0_D 69 IAALLAAGTPRTTLVALVEYESP-AVLSQII-ELECHGVITQPLDAHRVLPVLVSARR 124 (196)
T ss_dssp HHHHHHHSCTTCEEEEEECCCSH-HHHHHHH-HHTCSEEEESSCCGGGHHHHHHHHHH
T ss_pred HHHHHhccCCCCCEEEEEcCCCh-HHHHHHH-HcCCCeeEecCcCHHHHHHHHHHHHH
Confidence 444444 45788777554443 3444443 46877677788999999999998876
No 491
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=25.85 E-value=34 Score=33.51 Aligned_cols=34 Identities=18% Similarity=0.381 Sum_probs=27.6
Q ss_pred CCccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 4 QDHVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 4 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
|++++|.|+-.|.+| ..||..|+++||+|++...
T Consensus 13 ~~~~~IgvIGlG~MG-----~~lA~~La~~G~~V~v~~r 46 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMG-----RNLALNIESRGYTVSIFNR 46 (480)
T ss_dssp --CBSEEEECCSHHH-----HHHHHHHHTTTCCEEEECS
T ss_pred cCCCeEEEEccHHHH-----HHHHHHHHhCCCeEEEEeC
Confidence 567799999888887 4689999999999998864
No 492
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=25.81 E-value=79 Score=27.57 Aligned_cols=32 Identities=19% Similarity=0.189 Sum_probs=25.3
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 8 ~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
|+++++.++.| =-.++++.|+++|++|.++..
T Consensus 9 k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r 40 (259)
T 4e6p_A 9 KSALITGSARG---IGRAFAEAYVREGATVAIADI 40 (259)
T ss_dssp CEEEEETCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 77778877653 356889999999999988864
No 493
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=25.72 E-value=1.1e+02 Score=28.69 Aligned_cols=34 Identities=12% Similarity=0.052 Sum_probs=26.2
Q ss_pred ccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCcc
Q 011848 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEH 44 (476)
Q Consensus 6 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (476)
++||+++..+ .-...+++++.++||+|..+....
T Consensus 11 ~~~ili~g~g-----~~~~~~~~a~~~~G~~v~~~~~~~ 44 (391)
T 1kjq_A 11 ATRVMLLGSG-----ELGKEVAIECQRLGVEVIAVDRYA 44 (391)
T ss_dssp CCEEEEESCS-----HHHHHHHHHHHTTTCEEEEEESST
T ss_pred CCEEEEECCC-----HHHHHHHHHHHHcCCEEEEEECCC
Confidence 5699999553 235778999999999998887643
No 494
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=25.69 E-value=2.7e+02 Score=22.56 Aligned_cols=138 Identities=11% Similarity=0.097 Sum_probs=75.3
Q ss_pred CceEEEEecccccCCHHHHHHHHHHHhhCCCcEEEEEcCCCCCCCCCCCCCchHHHHHhcCCceeeeccCHHHHhCcCCC
Q 011848 283 QSVIYVSFGSIAVMSRDQLIEFYYGLVHSKKSFLWVIRPDLISGKDGENQIPEELLEATKERGCIAGWVPQEEVLAHSAV 362 (476)
Q Consensus 283 ~~~V~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~vp~~~ll~~~~~ 362 (476)
++.|-|-+||.. +-...++....++..+..+-..+- +...+|+.+.+-. .. .....+
T Consensus 3 ~~~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~--------SaHR~p~~~~~~~----------~~---a~~~g~ 59 (163)
T 3ors_A 3 AMKVAVIMGSSS--DWKIMQESCNMLDYFEIPYEKQVV--------SAHRTPKMMVQFA----------SE---ARERGI 59 (163)
T ss_dssp CCCEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEEC--------CTTTSHHHHHHHH----------HH---TTTTTC
T ss_pred CCeEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEE--------CCcCCHHHHHHHH----------HH---HHhCCC
Confidence 455777788775 566677888888888877655552 2224555443210 00 011112
Q ss_pred CccccccCh----hHHHHHHHhCCceeccccccchh---h---hhHhhhcceee--eEE-ec--cccCHHHHHHHHHHHH
Q 011848 363 GGFLTHCGW----NSTLESIVAGMPMICWPSFADQQ---I---NSRFVGEVWKL--GLD-IK--DLCDRNIVEKAVNDLM 427 (476)
Q Consensus 363 ~~~I~HgG~----gs~~eal~~GvP~l~~P~~~DQ~---~---na~r~~e~~G~--g~~-~~--~~~~~~~l~~ai~~~l 427 (476)
+.+|.=+|. .++.-++ .-+|++.+|....-. + -.-.+ =.|+ +.. ++ .-.++..++..|..+
T Consensus 60 ~ViIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlS~vqm--p~GvPVatV~I~~a~~~nAa~lAa~Il~~- 135 (163)
T 3ors_A 60 NIIIAGAGGAAHLPGMVASL-TTLPVIGVPIETKSLKGIDSLLSIVQM--PGGIPVATTAIGAAGAKNAGILAARMLSI- 135 (163)
T ss_dssp CEEEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHTC--CTTSCCEECCSTHHHHHHHHHHHHHHHHT-
T ss_pred cEEEEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHHhhC--CCCCceEEEEcCCcccHHHHHHHHHHHhC-
Confidence 236665553 3444433 678999999753211 1 11112 1244 322 22 245555555555444
Q ss_pred hHhHHHHHHHHHHHHHHHHHHH
Q 011848 428 VERKEEFMESADRMANLAKKSV 449 (476)
Q Consensus 428 ~~~~~~~~~~a~~l~~~~~~~~ 449 (476)
.| +.++++.+.++++.++.+
T Consensus 136 ~d--~~l~~kl~~~r~~~~~~v 155 (163)
T 3ors_A 136 QN--PSLVEKLNQYESSLIQKV 155 (163)
T ss_dssp TC--THHHHHHHHHHHHHHHHH
T ss_pred CC--HHHHHHHHHHHHHHHHHH
Confidence 35 789999999888887753
No 495
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=25.69 E-value=1e+02 Score=26.98 Aligned_cols=38 Identities=18% Similarity=0.212 Sum_probs=28.0
Q ss_pred CCCCCccEEEEEcCCC--ccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 1 MEKQDHVHVAILPLPA--VGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 1 m~~~~~~~il~~~~~~--~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
|.+.+ -|++++|..+ +| =-.++|+.|+++|++|.+..-
T Consensus 1 M~~l~-gK~alVTGaa~~~G---IG~aiA~~la~~Ga~Vvi~~r 40 (256)
T 4fs3_A 1 MLNLE-NKTYVIMGIANKRS---IAFGVAKVLDQLGAKLVFTYR 40 (256)
T ss_dssp CCCCT-TCEEEEECCCSTTC---HHHHHHHHHHHTTCEEEEEES
T ss_pred CcCCC-CCEEEEECCCCCch---HHHHHHHHHHHCCCEEEEEEC
Confidence 44432 3888998854 33 247899999999999998875
No 496
>2rk3_A Protein DJ-1; parkinson'S disease, THIJ, PFPI, chaperone, cytoplasm, disease mutation, nucleus, oncogene, oxidation, parkinson disease; 1.05A {Homo sapiens} PDB: 1pdv_A 1pdw_A 3cy6_A 1pe0_A 3cza_A 3cyf_A 2rk4_A 3cz9_A* 3ezg_A 3f71_A 3sf8_A 1p5f_A 1ps4_A 1q2u_A 1soa_A 1ucf_A 2or3_A 3bwe_A 3b38_A 3b36_A ...
Probab=25.68 E-value=1.3e+02 Score=24.94 Aligned_cols=38 Identities=13% Similarity=0.160 Sum_probs=29.5
Q ss_pred ccEEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCcc
Q 011848 6 HVHVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEH 44 (476)
Q Consensus 6 ~~~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~ 44 (476)
++||+|+..++. ...-+....+.|.+.|++|++++...
T Consensus 3 ~~~v~ill~~g~-~~~e~~~~~~~l~~ag~~v~~vs~~~ 40 (197)
T 2rk3_A 3 SKRALVILAKGA-EEMETVIPVDVMRRAGIKVTVAGLAG 40 (197)
T ss_dssp CCEEEEEECTTC-CHHHHHHHHHHHHHTTCEEEEEETTC
T ss_pred CCEEEEEECCCC-cHHHHHHHHHHHHHCCCEEEEEEcCC
Confidence 348998888766 44556667888999999999999743
No 497
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=25.66 E-value=63 Score=28.59 Aligned_cols=32 Identities=16% Similarity=0.148 Sum_probs=26.4
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 8 ~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
|+++++.++.| --.++|+.|+++|++|.+...
T Consensus 32 k~~lVTGas~G---IG~aia~~la~~G~~V~~~~~ 63 (271)
T 3v2g_A 32 KTAFVTGGSRG---IGAAIAKRLALEGAAVALTYV 63 (271)
T ss_dssp CEEEEETTTSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 78888888764 357899999999999998854
No 498
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=25.62 E-value=85 Score=27.53 Aligned_cols=32 Identities=25% Similarity=0.245 Sum_probs=25.0
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 8 ~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
|+++++..+.| --.++++.|+++|++|+++.-
T Consensus 9 k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~r 40 (264)
T 2dtx_A 9 KVVIVTGASMG---IGRAIAERFVDEGSKVIDLSI 40 (264)
T ss_dssp CEEEEESCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEec
Confidence 67777776653 356889999999999998864
No 499
>3hr8_A Protein RECA; alpha and beta proteins (A/B, A+B), ATP-binding, cytoplasm, damage, DNA recombination, DNA repair, DNA-binding; 1.95A {Thermotoga maritima}
Probab=25.56 E-value=3.4e+02 Score=25.15 Aligned_cols=37 Identities=22% Similarity=0.263 Sum_probs=31.1
Q ss_pred EEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeCccc
Q 011848 9 VAILPLPAVGHVNSMLNLAELLGHAGIKITFLNTEHY 45 (476)
Q Consensus 9 il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~~~~ 45 (476)
++++-.|+.|-..=++.++..+...|..|.|+..+..
T Consensus 64 ~~I~GppGsGKSTLal~la~~~~~~gg~VlyId~E~s 100 (356)
T 3hr8_A 64 VEIFGQESSGKTTLALHAIAEAQKMGGVAAFIDAEHA 100 (356)
T ss_dssp EEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred EEEECCCCCCHHHHHHHHHHHHHhcCCeEEEEecccc
Confidence 4556667889999999999999999999999988653
No 500
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=25.52 E-value=72 Score=28.12 Aligned_cols=32 Identities=16% Similarity=0.098 Sum_probs=26.2
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCEEEEEeC
Q 011848 8 HVAILPLPAVGHVNSMLNLAELLGHAGIKITFLNT 42 (476)
Q Consensus 8 ~il~~~~~~~GH~~p~l~La~~L~~rGH~Vt~~~~ 42 (476)
|+++++.++.| --.++++.|+++|++|+++.-
T Consensus 12 k~~lVTGas~g---IG~~ia~~l~~~G~~V~~~~r 43 (276)
T 1mxh_A 12 PAAVITGGARR---IGHSIAVRLHQQGFRVVVHYR 43 (276)
T ss_dssp CEEEETTCSSH---HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEeC
Confidence 67888877764 457899999999999998875
Done!