Query 011849
Match_columns 476
No_of_seqs 199 out of 499
Neff 3.0
Searched_HMMs 46136
Date Fri Mar 29 05:54:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011849.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011849hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0431 Auxilin-like protein a 100.0 9.2E-43 2E-47 358.1 22.9 421 1-474 1-453 (453)
2 COG0484 DnaJ DnaJ-class molecu 99.2 8.6E-12 1.9E-16 127.5 5.4 57 410-473 5-61 (371)
3 PRK09430 djlA Dna-J like membr 99.1 6.6E-11 1.4E-15 115.4 6.7 64 409-472 200-263 (267)
4 KOG0713 Molecular chaperone (D 99.1 3.7E-11 8.1E-16 121.5 5.1 63 405-474 12-74 (336)
5 smart00271 DnaJ DnaJ molecular 99.1 1.5E-10 3.2E-15 86.7 6.0 56 411-472 3-58 (60)
6 cd06257 DnaJ DnaJ domain or J- 99.1 1.9E-10 4.2E-15 84.4 5.8 54 411-471 2-55 (55)
7 PRK14288 chaperone protein Dna 99.1 1.3E-10 2.9E-15 117.2 5.4 57 410-473 4-60 (369)
8 PF00226 DnaJ: DnaJ domain; I 99.0 5.7E-10 1.2E-14 85.1 5.3 55 412-472 3-57 (64)
9 PRK14296 chaperone protein Dna 99.0 4.3E-10 9.4E-15 113.8 5.2 56 410-473 5-60 (372)
10 KOG0712 Molecular chaperone (D 99.0 5.9E-10 1.3E-14 113.0 5.2 57 407-473 2-58 (337)
11 PRK14279 chaperone protein Dna 98.9 8E-10 1.7E-14 112.6 5.6 57 410-473 10-66 (392)
12 PRK14285 chaperone protein Dna 98.9 1.3E-09 2.7E-14 110.1 5.6 57 410-473 4-60 (365)
13 PRK14286 chaperone protein Dna 98.9 1.5E-09 3.2E-14 109.9 5.2 57 410-473 5-61 (372)
14 PRK14299 chaperone protein Dna 98.9 1.7E-09 3.8E-14 105.8 4.8 55 410-472 5-59 (291)
15 PRK14295 chaperone protein Dna 98.9 2.1E-09 4.5E-14 109.5 5.6 57 410-473 10-66 (389)
16 PRK14282 chaperone protein Dna 98.9 2.5E-09 5.3E-14 107.9 5.4 58 410-473 5-62 (369)
17 PRK14277 chaperone protein Dna 98.8 2.4E-09 5.3E-14 108.6 5.2 57 410-473 6-62 (386)
18 PRK14283 chaperone protein Dna 98.8 3E-09 6.5E-14 107.6 5.4 56 410-473 6-61 (378)
19 PTZ00037 DnaJ_C chaperone prot 98.8 2.6E-09 5.7E-14 110.4 4.9 53 410-473 29-81 (421)
20 PRK14287 chaperone protein Dna 98.8 2.8E-09 6.1E-14 107.8 5.0 56 410-473 5-60 (371)
21 PRK14294 chaperone protein Dna 98.8 3.1E-09 6.6E-14 107.1 5.3 57 410-473 5-61 (366)
22 PRK14284 chaperone protein Dna 98.8 3.2E-09 7E-14 107.9 5.3 56 411-473 3-58 (391)
23 PRK14276 chaperone protein Dna 98.8 3.2E-09 7E-14 107.6 5.3 56 410-473 5-60 (380)
24 PRK10767 chaperone protein Dna 98.8 3.5E-09 7.5E-14 106.6 5.4 57 410-473 5-61 (371)
25 KOG0718 Molecular chaperone (D 98.8 3E-09 6.4E-14 112.0 5.0 63 406-472 6-68 (546)
26 PRK14278 chaperone protein Dna 98.8 3.5E-09 7.7E-14 107.3 5.4 56 410-473 4-59 (378)
27 PRK14297 chaperone protein Dna 98.8 3.9E-09 8.4E-14 106.9 5.2 57 410-473 5-61 (380)
28 PRK14280 chaperone protein Dna 98.8 4.3E-09 9.3E-14 106.5 5.3 56 410-473 5-60 (376)
29 PRK10266 curved DNA-binding pr 98.8 4.6E-09 9.9E-14 103.4 5.3 55 410-472 5-59 (306)
30 PRK14281 chaperone protein Dna 98.8 5E-09 1.1E-13 106.9 5.7 57 410-473 4-60 (397)
31 PRK14291 chaperone protein Dna 98.8 4.6E-09 1E-13 106.5 5.3 56 410-473 4-59 (382)
32 PRK14301 chaperone protein Dna 98.8 4.8E-09 1E-13 106.2 5.4 57 410-473 5-61 (373)
33 PRK14298 chaperone protein Dna 98.8 4.6E-09 1E-13 106.6 4.9 56 410-473 6-61 (377)
34 PRK14290 chaperone protein Dna 98.8 8.1E-09 1.8E-13 104.1 5.3 58 410-473 4-61 (365)
35 PRK14300 chaperone protein Dna 98.7 1.2E-08 2.7E-13 103.1 5.7 56 410-473 4-59 (372)
36 KOG0717 Molecular chaperone (D 98.7 8.5E-09 1.8E-13 108.3 4.6 56 410-471 9-64 (508)
37 KOG0719 Molecular chaperone (D 98.7 1.4E-08 3E-13 99.7 5.1 59 410-473 15-73 (264)
38 PRK14293 chaperone protein Dna 98.7 1.9E-08 4.2E-13 101.6 5.8 56 410-473 4-59 (374)
39 KOG0691 Molecular chaperone (D 98.7 1.7E-08 3.7E-13 100.9 4.8 56 411-473 7-62 (296)
40 PRK14292 chaperone protein Dna 98.7 2E-08 4.3E-13 101.2 5.1 55 411-473 4-58 (371)
41 COG2214 CbpA DnaJ-class molecu 98.7 3E-08 6.6E-13 85.9 5.4 57 410-472 7-63 (237)
42 PRK14289 chaperone protein Dna 98.7 2.5E-08 5.4E-13 101.1 5.3 56 410-472 6-61 (386)
43 KOG0716 Molecular chaperone (D 98.6 3.2E-08 7E-13 98.3 5.0 55 411-472 33-87 (279)
44 KOG0715 Molecular chaperone (D 98.6 6E-08 1.3E-12 96.1 5.5 61 405-473 39-99 (288)
45 PHA03102 Small T antigen; Revi 98.6 7.1E-08 1.5E-12 88.7 4.9 50 413-473 9-60 (153)
46 PRK05014 hscB co-chaperone Hsc 98.5 2.1E-07 4.5E-12 86.0 6.5 60 411-472 3-64 (171)
47 PTZ00100 DnaJ chaperone protei 98.5 1.6E-07 3.4E-12 83.3 5.4 52 409-471 65-116 (116)
48 PTZ00341 Ring-infected erythro 98.4 2.1E-07 4.6E-12 104.9 5.0 56 410-473 574-629 (1136)
49 KOG0721 Molecular chaperone (D 98.4 3E-07 6.5E-12 89.4 5.1 61 404-473 96-156 (230)
50 PRK03578 hscB co-chaperone Hsc 98.4 7.3E-07 1.6E-11 83.0 6.5 61 410-472 7-69 (176)
51 PRK01356 hscB co-chaperone Hsc 98.3 8.6E-07 1.9E-11 81.8 6.0 57 411-471 4-62 (166)
52 PRK00294 hscB co-chaperone Hsc 98.3 1.2E-06 2.5E-11 81.7 6.9 60 411-472 6-67 (173)
53 KOG0550 Molecular chaperone (D 98.3 8.1E-07 1.8E-11 93.2 6.3 98 368-472 325-430 (486)
54 KOG0720 Molecular chaperone (D 98.3 4.8E-07 1E-11 95.3 4.1 55 410-472 236-290 (490)
55 TIGR00714 hscB Fe-S protein as 98.1 3.8E-06 8.2E-11 76.8 6.0 50 421-472 3-52 (157)
56 TIGR03835 termin_org_DnaJ term 98.1 2.4E-06 5.2E-11 94.8 5.6 55 410-472 3-57 (871)
57 COG5407 SEC63 Preprotein trans 98.1 3.6E-06 7.8E-11 89.2 4.8 84 384-472 74-159 (610)
58 KOG0624 dsRNA-activated protei 98.1 1.2E-05 2.6E-10 83.7 8.3 61 410-474 395-455 (504)
59 PHA02624 large T antigen; Prov 98.0 4.8E-06 1E-10 90.8 5.3 50 412-472 14-65 (647)
60 KOG0714 Molecular chaperone (D 98.0 3E-06 6.5E-11 77.6 3.0 56 411-472 5-60 (306)
61 KOG1150 Predicted molecular ch 98.0 5.4E-06 1.2E-10 80.7 4.1 56 411-472 55-110 (250)
62 TIGR02349 DnaJ_bact chaperone 97.8 2.8E-05 6.2E-10 78.0 4.9 32 412-443 3-34 (354)
63 KOG0722 Molecular chaperone (D 97.6 1.9E-05 4.2E-10 79.2 1.5 56 410-473 34-89 (329)
64 PRK01773 hscB co-chaperone Hsc 97.5 0.00024 5.3E-09 66.4 6.6 57 413-471 6-64 (173)
65 KOG1789 Endocytosis protein RM 97.2 0.0004 8.6E-09 79.9 5.8 41 422-472 1298-1338(2235)
66 COG1076 DjlA DnaJ-domain-conta 97.0 0.00051 1.1E-08 63.3 3.6 60 410-469 114-173 (174)
67 KOG0723 Molecular chaperone (D 96.5 0.0051 1.1E-07 55.0 5.3 50 413-473 60-109 (112)
68 COG5269 ZUO1 Ribosome-associat 95.8 0.0093 2E-07 61.0 4.0 49 420-473 57-105 (379)
69 KOG0568 Molecular chaperone (D 88.7 0.67 1.5E-05 47.1 5.0 64 394-467 31-97 (342)
70 PF14687 DUF4460: Domain of un 82.0 3.8 8.2E-05 36.5 5.8 50 420-472 5-54 (112)
71 COG1076 DjlA DnaJ-domain-conta 71.5 7.2 0.00016 36.3 4.9 46 424-471 18-63 (174)
72 PF08628 Nexin_C: Sorting nexi 69.1 9.4 0.0002 32.8 4.7 84 377-464 24-110 (113)
73 COG3795 Uncharacterized protei 66.1 4.2 9.2E-05 37.4 2.1 22 294-326 79-100 (123)
74 cd08815 Death_TNFRSF25_DR3 Dea 53.7 13 0.00028 31.8 2.8 30 376-405 38-67 (77)
75 COG2987 HutU Urocanate hydrata 49.9 37 0.0008 37.7 6.1 44 296-339 193-243 (561)
76 KOG3192 Mitochondrial J-type c 49.1 31 0.00067 33.4 4.8 53 417-471 18-70 (168)
77 PF08081 RBM1CTR: RBM1CTR (NUC 35.0 17 0.00037 28.5 0.7 13 43-55 15-27 (45)
78 PF03656 Pam16: Pam16; InterP 30.7 68 0.0015 29.5 3.9 31 412-442 61-91 (127)
79 PF11363 DUF3164: Protein of u 30.6 49 0.0011 32.2 3.1 31 373-403 98-128 (195)
80 COG3483 TDO2 Tryptophan 2,3-di 28.7 84 0.0018 32.1 4.4 49 423-471 34-87 (262)
81 PF02655 ATP-grasp_3: ATP-gras 25.8 33 0.00071 31.0 1.0 9 296-304 149-157 (161)
82 PF14267 DUF4357: Domain of un 22.9 18 0.00039 28.7 -1.1 22 247-268 18-39 (55)
83 cd08315 Death_TRAILR_DR4_DR5 D 22.6 78 0.0017 27.3 2.7 28 377-404 47-76 (96)
84 TIGR03474 incFII_RepA incFII f 20.7 57 0.0012 33.6 1.6 28 301-328 168-199 (275)
85 PTZ00448 hypothetical protein; 20.3 77 0.0017 34.1 2.5 43 382-431 34-76 (373)
86 cd08316 Death_FAS_TNFRSF6 Deat 20.1 1E+02 0.0022 27.0 2.8 29 376-404 48-78 (97)
No 1
>KOG0431 consensus Auxilin-like protein and related proteins containing DnaJ domain [General function prediction only]
Probab=100.00 E-value=9.2e-43 Score=358.07 Aligned_cols=421 Identities=26% Similarity=0.309 Sum_probs=264.5
Q ss_pred CccccccccCcccccccCCCCCCCccccccccccccCCCCCcccccCCCCchhhhhhccCCccccccCCCCCCccccccc
Q 011849 1 MDESWRMRMGLGMQARKSMPEETPATATRHSFTSTALDPDDFSDVFGGPPRTLLARKFSADFSTTTSSSSSSNFYSEVFR 80 (476)
Q Consensus 1 mdeswr~~mg~~~pr~rs~~~~~~~~~~~~~~~~~~l~~ddf~dvfggpprs~l~~~fs~~~~~~~~~~~s~~fy~e~f~ 80 (476)
+|..|+|.+|. . ++....-++ +.++-.....++.++++..+...+.+.+.++-.. .+.+...+.+..
T Consensus 1 ~~~~~~~~~~~-------~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~- 67 (453)
T KOG0431|consen 1 ADAKFRFAKGR-------S-EDESFSITR-SEMDDSTKNSDSREREGRSPQVELTRERAENEAE---FSFVQAKLLEER- 67 (453)
T ss_pred CCccccccccc-------c-ccceeeccc-cccCcccccccccccccccccccccccccccccc---cccccccccccc-
Confidence 57788888882 2 222222222 3335677888999999999999999999874331 123345555666
Q ss_pred CCCCCccc------cCCCCCCccceeeecCCCCCCcccccccCCC-Cc---ccccccCCCCCCCCCcccccCcCCCCC--
Q 011849 81 IPSPEFVF------PTRRAGRVLPAFRIPASRGEGFYSDVFASGD-GR---KSRERSQPKSKSNSSSVLSSEELSPLR-- 148 (476)
Q Consensus 81 ~~~~~~~~------~~~~~gr~lp~frip~~~~~gfy~difg~~~-~~---rsr~rs~~~sksnsss~~ssee~sp~r-- 148 (476)
+ ++... ....++.++++++.|+. ...++..+|+... .+ -.+..+......++++-+..++...+.
T Consensus 68 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~s~~~~~~~~~~~~~~~ 144 (453)
T KOG0431|consen 68 P--PGQKGSGRSKNDLKSEDESERAKREKSG-TDATEGHAFVGNGADGKATVKRQDPETSAEQRSSSSLDHEAAAGHDST 144 (453)
T ss_pred C--cccCcccccccccccccccccccccCCC-cccccCccccccccccccCCCccCcccccccCCcccccccccccCccc
Confidence 5 33333 22255566899999998 8888998888642 22 223344455556666666666666653
Q ss_pred --CCCCCcchhhhccccccccccccccCCCCCCCCCCCCcCCCCCCCcccCCCCCcccccccccccccccccccccccce
Q 011849 149 --PPDGEDVALSSFTSKLRPINVPCRWNSTTMMPDDHPNRQGMPMPAFQCSRPSYNDDHHLKEDDANYNNFIRSSHYGFS 226 (476)
Q Consensus 149 --p~~g~d~alssf~sklrpi~vp~r~~ss~~~p~~~~~~~~~~~~~f~c~~~~~~~~~~~~~~~~~~~~~~~s~h~g~~ 226 (476)
|...+.-.++++..+..+..+.....-.+.-... ...++. ....-+-+. ...+ ..+..+...|.+-
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~s~~~-----~~~~---~~~s~~~~~~~~~- 212 (453)
T KOG0431|consen 145 EEAAAADEKPRSSAEVREKEDKVSNTSSAVERAKPS-AKARGF--AQALGSQQQ-----ATAP---KADSFFNSTSRGA- 212 (453)
T ss_pred cccccccccccccccccccccccccccccccccCcc-cccccc--ccccccccc-----CCCc---cccccccccccCC-
Confidence 2356666667777777776666555211111110 000000 000000000 0011 1123445555554
Q ss_pred eecCCCcccccCCCcceeeeeecccccccCCCCcCcC-ccCCCC---CCCccc-ccccchhhh---hhhccccchhceee
Q 011849 227 RRVSSPETISVEPTSFRSIKVSVDDLELNSPSSPASS-LCQEPE---PKTSFM-QSGNAMQEQ---EVEQEEDEVMSSYV 298 (476)
Q Consensus 227 ~~~s~petis~~~~s~~~~k~s~~d~~~~~p~s~~ss-~~~~p~---~k~~~~-~~~~~~~e~---~~~~~~devmssyv 298 (476)
.+...|++......+.....-. +......+.++. -|++.+ .++..+ ....-..++ .-.....+.|.++.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~s~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (453)
T KOG0431|consen 213 SAPADPFADLDDLSSGSNASKS---GSSSDLSSRVSPGITETTDSPPSKTSSPPNQQKKSPPDFQAKPSSESPEASTQKR 289 (453)
T ss_pred CCCCCccccccchhhhcccCCC---CCcccccCCCCCCCCCCCCCchhhhcccccchhccchhhhcccCccchhhccccc
Confidence 5556677777766655554221 111111333333 233311 111111 101111111 11233347888888
Q ss_pred EEecCcc---ccC------CCC-cchhHHHHHHHHHhhcccchhhhhhhhhhhccccccccccccCcccccCCCCchhhh
Q 011849 299 IEINSDY---REG------TGE-AVSIDEAIAWAKEKFQSQSSFTLAQQEKHELAADNEGHETLDSPMEEKTNPTTEEGK 368 (476)
Q Consensus 299 ieins~~---re~------~~~-a~~idEAIAWAKEkf~s~s~~~~r~~~~~~~~~~~~~~~r~qsslkeK~~p~t~~q~ 368 (476)
+.++... |-+ ..+ ..+-.++..|++++..+...+ ....+.+.++.+++|
T Consensus 290 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~d~k~~~~~ae~ 348 (453)
T KOG0431|consen 290 PNYAQKRSDVPPGNTERGKRAESSSTRTKKQMDTFSDLLNPQGF---------------------KSTSDEKRPREIAEM 348 (453)
T ss_pred cchhccCCCCCcccccccccccccccccchhhhhhhhhhccccc---------------------cchhhhhhHHHHHHH
Confidence 8766543 221 111 334556666776666654433 233444778888888
Q ss_pred hhhhhhhhhhhHHHHHHHHhcCCCCcHHHHHHhcCcccCCCCCCcccCCCCCCChhHHHHHHHHHHHhhCCCccccCCCC
Q 011849 369 EQSQDDIETELLDEEIRLWSAGKETNIRLLLSALHHVLWPNSGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGAT 448 (476)
Q Consensus 369 eqeE~~~~~D~Id~KI~~Wa~GKe~NIRALLSTLh~VLWees~WK~VGmsdLaTp~eVKKAYRKAaLkvHPDKL~qrGa~ 448 (476)
+. |+.+++|+|+.+|+.|+.|||+||||||+|||+|||++|+|++|+|.+|||+++|||+||||+|+|||||++++|++
T Consensus 349 ~~-e~~r~~e~~d~~I~~W~~GKE~NIRALLSTLh~VLW~es~WqpVsltDLVtp~~VKKaYrKA~L~VHPDKlqq~gas 427 (453)
T KOG0431|consen 349 RK-ELSRLMEPLDEEIRRWSEGKEGNIRALLSTLHYVLWPESGWQPVSLTDLVTPAQVKKAYRKAVLCVHPDKLQQKGAS 427 (453)
T ss_pred HH-HHHhhcchHHHHHHHhcccccccHHHHHHHHhHhhcCccCcccCchhhccCHHHHHHHHHhhhheeCcccccCCccc
Confidence 88 88999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccC
Q 011849 449 AQQKYVAEKVFSVLQDAWSAFISEDV 474 (476)
Q Consensus 449 ~EQK~IAE~VF~eLNEAYE~Fkdee~ 474 (476)
.+|||||+.||.+|++||+.|..+++
T Consensus 428 ~~qK~Iaekvfd~l~eawn~f~~~~~ 453 (453)
T KOG0431|consen 428 LEQKYIAEKVFDALSEAWNKFNQQED 453 (453)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhccCC
Confidence 99999999999999999999998874
No 2
>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
Probab=99.22 E-value=8.6e-12 Score=127.51 Aligned_cols=57 Identities=21% Similarity=0.313 Sum_probs=51.1
Q ss_pred CCCcccCCCCCCChhHHHHHHHHHHHhhCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011849 410 SGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISED 473 (476)
Q Consensus 410 s~WK~VGmsdLaTp~eVKKAYRKAaLkvHPDKL~qrGa~~EQK~IAE~VF~eLNEAYE~Fkdee 473 (476)
.-|+.|||+..+++++|||||||+++++|||+++. ...|+.+|++||+|||+|+|.+
T Consensus 5 dyYeiLGV~k~As~~EIKkAYRkLA~kyHPD~n~g-------~~~AeeKFKEI~eAYEVLsD~e 61 (371)
T COG0484 5 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPG-------DKEAEEKFKEINEAYEVLSDPE 61 (371)
T ss_pred chhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-------CHHHHHHHHHHHHHHHHhCCHH
Confidence 35889999999999999999999999999999973 1259999999999999999864
No 3
>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional
Probab=99.14 E-value=6.6e-11 Score=115.38 Aligned_cols=64 Identities=20% Similarity=0.308 Sum_probs=59.9
Q ss_pred CCCCcccCCCCCCChhHHHHHHHHHHHhhCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHhhc
Q 011849 409 NSGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISE 472 (476)
Q Consensus 409 es~WK~VGmsdLaTp~eVKKAYRKAaLkvHPDKL~qrGa~~EQK~IAE~VF~eLNEAYE~Fkde 472 (476)
...|+.||+.+.+++++||++|||+++++||||+..+|.+++.+..|+..|++|++||++|+++
T Consensus 200 ~~ay~vLgv~~~as~~eIk~aYr~L~~~~HPDk~~~~g~~~~~~~~a~ek~~~I~~AYe~L~~~ 263 (267)
T PRK09430 200 EDAYKVLGVSESDDDQEIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKEKAQEIQAAYELIKKQ 263 (267)
T ss_pred HhHHHHcCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHh
Confidence 4678999999999999999999999999999999888889998889999999999999999875
No 4
>KOG0713 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.13 E-value=3.7e-11 Score=121.47 Aligned_cols=63 Identities=24% Similarity=0.298 Sum_probs=54.6
Q ss_pred ccCCCCCCcccCCCCCCChhHHHHHHHHHHHhhCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHhhccC
Q 011849 405 VLWPNSGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISEDV 474 (476)
Q Consensus 405 VLWees~WK~VGmsdLaTp~eVKKAYRKAaLkvHPDKL~qrGa~~EQK~IAE~VF~eLNEAYE~Fkdee~ 474 (476)
|+=...-|+.|||...++..+||+||||++|++||||++.. + .|...|++||.||++|++.+.
T Consensus 12 v~~~rDfYelLgV~k~Asd~eIKkAYRKLALk~HPDkNpdd----p---~A~e~F~~in~AYEVLsDpek 74 (336)
T KOG0713|consen 12 VLAGRDFYELLGVPKNASDQEIKKAYRKLALKYHPDKNPDD----P---NANEKFKEINAAYEVLSDPEK 74 (336)
T ss_pred hhcCCCHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC----H---HHHHHHHHHHHHHHHhcCHHH
Confidence 33334678999999999999999999999999999999852 1 588999999999999999763
No 5
>smart00271 DnaJ DnaJ molecular chaperone homology domain.
Probab=99.11 E-value=1.5e-10 Score=86.66 Aligned_cols=56 Identities=27% Similarity=0.327 Sum_probs=50.0
Q ss_pred CCcccCCCCCCChhHHHHHHHHHHHhhCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHhhc
Q 011849 411 GWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISE 472 (476)
Q Consensus 411 ~WK~VGmsdLaTp~eVKKAYRKAaLkvHPDKL~qrGa~~EQK~IAE~VF~eLNEAYE~Fkde 472 (476)
-|+.|||...++..+||++|+++++.+|||+.... ...++..|..|++||++|++.
T Consensus 3 ~y~vLgl~~~~~~~~ik~ay~~l~~~~HPD~~~~~------~~~~~~~~~~l~~Ay~~L~~~ 58 (60)
T smart00271 3 YYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGD------KEEAEEKFKEINEAYEVLSDP 58 (60)
T ss_pred HHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc------hHHHHHHHHHHHHHHHHHcCC
Confidence 47889999999999999999999999999998632 357889999999999999875
No 6
>cd06257 DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.
Probab=99.09 E-value=1.9e-10 Score=84.45 Aligned_cols=54 Identities=26% Similarity=0.348 Sum_probs=48.1
Q ss_pred CCcccCCCCCCChhHHHHHHHHHHHhhCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHhh
Q 011849 411 GWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFIS 471 (476)
Q Consensus 411 ~WK~VGmsdLaTp~eVKKAYRKAaLkvHPDKL~qrGa~~EQK~IAE~VF~eLNEAYE~Fkd 471 (476)
-|+.+|+...++..+||++||++++++||||..+. ..+...|..|++||++|++
T Consensus 2 ~y~vLgl~~~~~~~~ik~~y~~l~~~~HPD~~~~~-------~~~~~~~~~l~~Ay~~L~d 55 (55)
T cd06257 2 YYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDD-------PEAEEKFKEINEAYEVLSD 55 (55)
T ss_pred hHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc-------HHHHHHHHHHHHHHHHhcC
Confidence 37789999999999999999999999999998631 4788999999999999974
No 7
>PRK14288 chaperone protein DnaJ; Provisional
Probab=99.06 E-value=1.3e-10 Score=117.23 Aligned_cols=57 Identities=25% Similarity=0.383 Sum_probs=50.1
Q ss_pred CCCcccCCCCCCChhHHHHHHHHHHHhhCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011849 410 SGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISED 473 (476)
Q Consensus 410 s~WK~VGmsdLaTp~eVKKAYRKAaLkvHPDKL~qrGa~~EQK~IAE~VF~eLNEAYE~Fkdee 473 (476)
.-|+.|||...+++++|||||||+++++||||++.. ..|+..|++|++||++|++.+
T Consensus 4 dyY~vLgv~~~As~~eIkkayrkla~k~HPD~~~~~-------~~a~~~f~~i~~AYevLsd~~ 60 (369)
T PRK14288 4 SYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGD-------KEAEEKFKLINEAYGVLSDEK 60 (369)
T ss_pred ChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCc-------cHHHHHHHHHHHHHHHhccHH
Confidence 458899999999999999999999999999998631 137889999999999998764
No 8
>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []. Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Such a structure is shown in the following schematic representation: +------------+-+-------+-----+-----------+--------------------------------+ | N-terminal | | Gly-R | | CXXCXGXG | C-terminal | +------------+-+-------+-----+-----------+--------------------------------+ It is thought that the 'J' domain of DnaJ mediates the interaction with the dnaK protein and consists of four helices, the second of which has a charged surface that includes at least one pair of basic residues that are essential for interaction with the ATPase domain of Hsp70. The J- and CRR-domains are found in many prokaryotic and eukaryotic proteins [], either together or separately. In yeast, J-domains have been classified into 3 groups; the class III proteins are functionally distinct and do not appear to act as molecular chaperones []. ; GO: 0031072 heat shock protein binding; PDB: 2GUZ_C 2L6L_A 1HDJ_A 2EJ7_A 1FPO_C 2CUG_A 2QSA_A 2OCH_A 3BVO_B 3APQ_A ....
Probab=99.00 E-value=5.7e-10 Score=85.09 Aligned_cols=55 Identities=24% Similarity=0.334 Sum_probs=49.0
Q ss_pred CcccCCCCCCChhHHHHHHHHHHHhhCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHhhc
Q 011849 412 WCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISE 472 (476)
Q Consensus 412 WK~VGmsdLaTp~eVKKAYRKAaLkvHPDKL~qrGa~~EQK~IAE~VF~eLNEAYE~Fkde 472 (476)
|+.|||...++.++||++|+++++.+||||+.+.. ..|+..|..|++||++|.+.
T Consensus 3 y~iLgl~~~~~~~eik~~y~~l~~~~HPD~~~~~~------~~~~~~~~~i~~Ay~~L~~~ 57 (64)
T PF00226_consen 3 YEILGLPPDASDEEIKKAYRRLSKQYHPDKNSGDE------AEAEEKFARINEAYEILSDP 57 (64)
T ss_dssp HHHCTSTTTSSHHHHHHHHHHHHHHTSTTTGTSTH------HHHHHHHHHHHHHHHHHHSH
T ss_pred HHHCCCCCCCCHHHHHHHHHhhhhccccccchhhh------hhhhHHHHHHHHHHHHhCCH
Confidence 57899999999999999999999999999987421 46889999999999999875
No 9
>PRK14296 chaperone protein DnaJ; Provisional
Probab=98.98 E-value=4.3e-10 Score=113.80 Aligned_cols=56 Identities=16% Similarity=0.255 Sum_probs=49.6
Q ss_pred CCCcccCCCCCCChhHHHHHHHHHHHhhCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011849 410 SGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISED 473 (476)
Q Consensus 410 s~WK~VGmsdLaTp~eVKKAYRKAaLkvHPDKL~qrGa~~EQK~IAE~VF~eLNEAYE~Fkdee 473 (476)
.-|+.|||...+++++|||||||+++++||||++. . -|+..|++|++||++|++.+
T Consensus 5 dyY~~Lgv~~~a~~~eik~ayrkla~~~HPD~n~~-~-------~a~~~F~~i~~AyevLsD~~ 60 (372)
T PRK14296 5 DYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKS-P-------DAHDKMVEINEAADVLLDKD 60 (372)
T ss_pred CHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-c-------hHHHHHHHHHHHHHHhcCHH
Confidence 35889999999999999999999999999999852 1 37889999999999999864
No 10
>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.96 E-value=5.9e-10 Score=113.05 Aligned_cols=57 Identities=23% Similarity=0.317 Sum_probs=50.6
Q ss_pred CCCCCCcccCCCCCCChhHHHHHHHHHHHhhCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011849 407 WPNSGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISED 473 (476)
Q Consensus 407 Wees~WK~VGmsdLaTp~eVKKAYRKAaLkvHPDKL~qrGa~~EQK~IAE~VF~eLNEAYE~Fkdee 473 (476)
|+..-|..|+|...+++++|||||||+++++||||++. |..+|++|++||++|++.+
T Consensus 2 ~~~~~y~il~v~~~As~~eikkayrkla~k~HpDkn~~----------~~ekfkei~~AyevLsd~e 58 (337)
T KOG0712|consen 2 KNTKLYDILGVSPDASEEEIKKAYRKLALKYHPDKNPD----------AGEKFKEISQAYEVLSDPE 58 (337)
T ss_pred cccccceeeccCCCcCHHHHHHHHHHHHHHhCCCCCcc----------HHHHHHHHHHHHHHhcCHH
Confidence 44456788999999999999999999999999999973 7789999999999999843
No 11
>PRK14279 chaperone protein DnaJ; Provisional
Probab=98.94 E-value=8e-10 Score=112.60 Aligned_cols=57 Identities=25% Similarity=0.297 Sum_probs=50.1
Q ss_pred CCCcccCCCCCCChhHHHHHHHHHHHhhCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011849 410 SGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISED 473 (476)
Q Consensus 410 s~WK~VGmsdLaTp~eVKKAYRKAaLkvHPDKL~qrGa~~EQK~IAE~VF~eLNEAYE~Fkdee 473 (476)
.-|+.|||...++.++|||||||+++++||||++.. ..|+..|++|++||++|++.+
T Consensus 10 Dyy~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~-------~~a~~~f~~i~~Ay~vLsD~~ 66 (392)
T PRK14279 10 DFYKELGVSSDASAEEIKKAYRKLARELHPDANPGD-------PAAEERFKAVSEAHDVLSDPA 66 (392)
T ss_pred CHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCC-------hHHHHHHHHHHHHHHHhcchh
Confidence 457899999999999999999999999999998631 147889999999999999865
No 12
>PRK14285 chaperone protein DnaJ; Provisional
Probab=98.91 E-value=1.3e-09 Score=110.10 Aligned_cols=57 Identities=26% Similarity=0.410 Sum_probs=50.0
Q ss_pred CCCcccCCCCCCChhHHHHHHHHHHHhhCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011849 410 SGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISED 473 (476)
Q Consensus 410 s~WK~VGmsdLaTp~eVKKAYRKAaLkvHPDKL~qrGa~~EQK~IAE~VF~eLNEAYE~Fkdee 473 (476)
.-|+.|||...++.++||+||||+++++||||++.. ..|+..|++|++||++|++.+
T Consensus 4 d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~-------~~a~~~f~~i~~Ay~vL~d~~ 60 (365)
T PRK14285 4 DYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGN-------KEAESIFKEATEAYEVLIDDN 60 (365)
T ss_pred CHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC-------HHHHHHHHHHHHHHHHHcCcc
Confidence 457899999999999999999999999999997531 137889999999999999864
No 13
>PRK14286 chaperone protein DnaJ; Provisional
Probab=98.89 E-value=1.5e-09 Score=109.90 Aligned_cols=57 Identities=21% Similarity=0.304 Sum_probs=49.7
Q ss_pred CCCcccCCCCCCChhHHHHHHHHHHHhhCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011849 410 SGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISED 473 (476)
Q Consensus 410 s~WK~VGmsdLaTp~eVKKAYRKAaLkvHPDKL~qrGa~~EQK~IAE~VF~eLNEAYE~Fkdee 473 (476)
.-|+.|||...++.++||+||||+++++||||++.. ..|++.|++|++||++|++..
T Consensus 5 d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~-------~~a~~~f~~i~~Ay~vL~d~~ 61 (372)
T PRK14286 5 SYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGN-------KESEEKFKEATEAYEILRDPK 61 (372)
T ss_pred CHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc-------hHHHHHHHHHHHHHHHhccHH
Confidence 457899999999999999999999999999998631 147889999999999998753
No 14
>PRK14299 chaperone protein DnaJ; Provisional
Probab=98.87 E-value=1.7e-09 Score=105.85 Aligned_cols=55 Identities=20% Similarity=0.292 Sum_probs=48.6
Q ss_pred CCCcccCCCCCCChhHHHHHHHHHHHhhCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHhhc
Q 011849 410 SGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISE 472 (476)
Q Consensus 410 s~WK~VGmsdLaTp~eVKKAYRKAaLkvHPDKL~qrGa~~EQK~IAE~VF~eLNEAYE~Fkde 472 (476)
.-|+.|||...+++++|||||||+++++||||++. .-|+..|++||+||++|++.
T Consensus 5 d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~--------~~~~~~f~~i~~Ay~~L~d~ 59 (291)
T PRK14299 5 DYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKS--------PGAEEKFKEINEAYTVLSDP 59 (291)
T ss_pred CHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--------hhHHHHHHHHHHHHHHhcCH
Confidence 45789999999999999999999999999999852 13778899999999999875
No 15
>PRK14295 chaperone protein DnaJ; Provisional
Probab=98.87 E-value=2.1e-09 Score=109.50 Aligned_cols=57 Identities=23% Similarity=0.308 Sum_probs=50.3
Q ss_pred CCCcccCCCCCCChhHHHHHHHHHHHhhCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011849 410 SGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISED 473 (476)
Q Consensus 410 s~WK~VGmsdLaTp~eVKKAYRKAaLkvHPDKL~qrGa~~EQK~IAE~VF~eLNEAYE~Fkdee 473 (476)
.-|+.|||...++..+|||||||+++++||||++.. ..|+..|++|++||++|++..
T Consensus 10 d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~-------~~a~~~f~~i~~Ay~vL~d~~ 66 (389)
T PRK14295 10 DYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGD-------AKAEERFKEISEAYDVLSDEK 66 (389)
T ss_pred CHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCc-------hhHHHHHHHHHHHHHHHCchh
Confidence 568999999999999999999999999999998631 147889999999999998753
No 16
>PRK14282 chaperone protein DnaJ; Provisional
Probab=98.85 E-value=2.5e-09 Score=107.91 Aligned_cols=58 Identities=19% Similarity=0.330 Sum_probs=50.5
Q ss_pred CCCcccCCCCCCChhHHHHHHHHHHHhhCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011849 410 SGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISED 473 (476)
Q Consensus 410 s~WK~VGmsdLaTp~eVKKAYRKAaLkvHPDKL~qrGa~~EQK~IAE~VF~eLNEAYE~Fkdee 473 (476)
.-|+.|+|...++.++||+||||+++++||||++.. +..|+..|++|++||++|++.+
T Consensus 5 d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~------~~~a~~~f~~i~~Ay~vL~d~~ 62 (369)
T PRK14282 5 DYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPEN------RKEAEQKFKEIQEAYEVLSDPQ 62 (369)
T ss_pred ChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCccc------hhHHHHHHHHHHHHHHHhcChh
Confidence 458899999999999999999999999999998531 1248899999999999998864
No 17
>PRK14277 chaperone protein DnaJ; Provisional
Probab=98.85 E-value=2.4e-09 Score=108.64 Aligned_cols=57 Identities=19% Similarity=0.257 Sum_probs=50.0
Q ss_pred CCCcccCCCCCCChhHHHHHHHHHHHhhCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011849 410 SGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISED 473 (476)
Q Consensus 410 s~WK~VGmsdLaTp~eVKKAYRKAaLkvHPDKL~qrGa~~EQK~IAE~VF~eLNEAYE~Fkdee 473 (476)
.-|+.|||...++.++||+||||+++++||||++.. ..|+.+|++|++||++|++..
T Consensus 6 d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~-------~~a~~~f~~i~~Ay~vL~d~~ 62 (386)
T PRK14277 6 DYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGD-------KEAEQKFKEINEAYEILSDPQ 62 (386)
T ss_pred CHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCc-------hHHHHHHHHHHHHHHHhCCHH
Confidence 468899999999999999999999999999998631 147889999999999998753
No 18
>PRK14283 chaperone protein DnaJ; Provisional
Probab=98.84 E-value=3e-09 Score=107.61 Aligned_cols=56 Identities=21% Similarity=0.356 Sum_probs=49.8
Q ss_pred CCCcccCCCCCCChhHHHHHHHHHHHhhCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011849 410 SGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISED 473 (476)
Q Consensus 410 s~WK~VGmsdLaTp~eVKKAYRKAaLkvHPDKL~qrGa~~EQK~IAE~VF~eLNEAYE~Fkdee 473 (476)
.-|+.|||...++.++|||||||+++++||||++. . .|+..|++|++||++|++..
T Consensus 6 d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~-~-------~a~~~f~~i~~Ay~~Lsd~~ 61 (378)
T PRK14283 6 DYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEE-E-------GAEEKFKEISEAYAVLSDDE 61 (378)
T ss_pred ChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-c-------cHHHHHHHHHHHHHHhchhH
Confidence 46889999999999999999999999999999752 1 47889999999999998764
No 19
>PTZ00037 DnaJ_C chaperone protein; Provisional
Probab=98.83 E-value=2.6e-09 Score=110.39 Aligned_cols=53 Identities=25% Similarity=0.350 Sum_probs=46.8
Q ss_pred CCCcccCCCCCCChhHHHHHHHHHHHhhCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011849 410 SGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISED 473 (476)
Q Consensus 410 s~WK~VGmsdLaTp~eVKKAYRKAaLkvHPDKL~qrGa~~EQK~IAE~VF~eLNEAYE~Fkdee 473 (476)
.-|+.|||...+++++|||||||+++++||||++. +.+|++|++||++|++.+
T Consensus 29 d~Y~vLGV~~~As~~eIKkAYrkla~k~HPDk~~~-----------~e~F~~i~~AYevLsD~~ 81 (421)
T PTZ00037 29 KLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGD-----------PEKFKEISRAYEVLSDPE 81 (421)
T ss_pred hHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCch-----------HHHHHHHHHHHHHhccHH
Confidence 35899999999999999999999999999999631 257999999999998754
No 20
>PRK14287 chaperone protein DnaJ; Provisional
Probab=98.83 E-value=2.8e-09 Score=107.81 Aligned_cols=56 Identities=23% Similarity=0.294 Sum_probs=49.1
Q ss_pred CCCcccCCCCCCChhHHHHHHHHHHHhhCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011849 410 SGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISED 473 (476)
Q Consensus 410 s~WK~VGmsdLaTp~eVKKAYRKAaLkvHPDKL~qrGa~~EQK~IAE~VF~eLNEAYE~Fkdee 473 (476)
.-|+.|||...++.++|||||||+++++||||++. . -|+..|++||+||++|++.+
T Consensus 5 d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~-----~---~~~~~f~~i~~Ay~~L~d~~ 60 (371)
T PRK14287 5 DYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKA-----P---DAEDKFKEVKEAYDTLSDPQ 60 (371)
T ss_pred CHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-----h---hHHHHHHHHHHHHHHhCcHh
Confidence 35889999999999999999999999999999752 1 37789999999999998754
No 21
>PRK14294 chaperone protein DnaJ; Provisional
Probab=98.83 E-value=3.1e-09 Score=107.12 Aligned_cols=57 Identities=21% Similarity=0.312 Sum_probs=49.6
Q ss_pred CCCcccCCCCCCChhHHHHHHHHHHHhhCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011849 410 SGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISED 473 (476)
Q Consensus 410 s~WK~VGmsdLaTp~eVKKAYRKAaLkvHPDKL~qrGa~~EQK~IAE~VF~eLNEAYE~Fkdee 473 (476)
.-|+.|||...++.++||+||||+++++||||++.. ..|+..|++|++||++|++..
T Consensus 5 d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~-------~~~~~~f~~~~~Ay~vL~d~~ 61 (366)
T PRK14294 5 DYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGD-------KEAEELFKEAAEAYEVLSDPK 61 (366)
T ss_pred ChHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCc-------hHHHHHHHHHHHHHHHhccHH
Confidence 458899999999999999999999999999998631 147788999999999998753
No 22
>PRK14284 chaperone protein DnaJ; Provisional
Probab=98.83 E-value=3.2e-09 Score=107.92 Aligned_cols=56 Identities=25% Similarity=0.361 Sum_probs=49.4
Q ss_pred CCcccCCCCCCChhHHHHHHHHHHHhhCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011849 411 GWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISED 473 (476)
Q Consensus 411 ~WK~VGmsdLaTp~eVKKAYRKAaLkvHPDKL~qrGa~~EQK~IAE~VF~eLNEAYE~Fkdee 473 (476)
-|+.|||...+++++|||||||+++++||||++.. ..|+..|++|++||++|++.+
T Consensus 3 ~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~-------~~a~~~f~~i~~Ay~vL~d~~ 58 (391)
T PRK14284 3 YYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGD-------AEAEKRFKEVSEAYEVLSDAQ 58 (391)
T ss_pred HHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc-------hHHHHHHHHHHHHHHHhcCHH
Confidence 47899999999999999999999999999998631 147889999999999998753
No 23
>PRK14276 chaperone protein DnaJ; Provisional
Probab=98.83 E-value=3.2e-09 Score=107.55 Aligned_cols=56 Identities=21% Similarity=0.309 Sum_probs=49.4
Q ss_pred CCCcccCCCCCCChhHHHHHHHHHHHhhCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011849 410 SGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISED 473 (476)
Q Consensus 410 s~WK~VGmsdLaTp~eVKKAYRKAaLkvHPDKL~qrGa~~EQK~IAE~VF~eLNEAYE~Fkdee 473 (476)
.-|+.|||...++.++||+||||+++++||||++.. .|+..|++|++||++|++.+
T Consensus 5 d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~--------~a~~~f~~i~~Ay~vL~d~~ 60 (380)
T PRK14276 5 EYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKEP--------GAEEKYKEVQEAYETLSDPQ 60 (380)
T ss_pred CHHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc--------CHHHHHHHHHHHHHHhcCHh
Confidence 458899999999999999999999999999998631 36778999999999998754
No 24
>PRK10767 chaperone protein DnaJ; Provisional
Probab=98.83 E-value=3.5e-09 Score=106.62 Aligned_cols=57 Identities=21% Similarity=0.341 Sum_probs=49.8
Q ss_pred CCCcccCCCCCCChhHHHHHHHHHHHhhCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011849 410 SGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISED 473 (476)
Q Consensus 410 s~WK~VGmsdLaTp~eVKKAYRKAaLkvHPDKL~qrGa~~EQK~IAE~VF~eLNEAYE~Fkdee 473 (476)
.-|+.|||...++.++||+||||+++++||||++.. ..|+..|++|++||++|++..
T Consensus 5 d~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~-------~~a~~~f~~i~~Ay~~L~d~~ 61 (371)
T PRK10767 5 DYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGD-------KEAEEKFKEIKEAYEVLSDPQ 61 (371)
T ss_pred ChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCc-------HHHHHHHHHHHHHHHHhcchh
Confidence 458899999999999999999999999999998521 137889999999999998754
No 25
>KOG0718 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.83 E-value=3e-09 Score=111.96 Aligned_cols=63 Identities=27% Similarity=0.337 Sum_probs=56.3
Q ss_pred cCCCCCCcccCCCCCCChhHHHHHHHHHHHhhCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHhhc
Q 011849 406 LWPNSGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISE 472 (476)
Q Consensus 406 LWees~WK~VGmsdLaTp~eVKKAYRKAaLkvHPDKL~qrGa~~EQK~IAE~VF~eLNEAYE~Fkde 472 (476)
+|+..-|..|++.+.+|++|||+||||.++.+||||+. ++++|..|+++|..|++|||+|.|.
T Consensus 6 ~~e~e~Ya~LNlpkdAt~eeI~~AYrr~~~lfHPDkh~----dpd~K~~AE~~F~~i~~AyEVLsDp 68 (546)
T KOG0718|consen 6 LDEIELYALLNLPKDATDEEIKKAYRRLSRLFHPDKHT----DPDQKKAAEEKFQRIQRAYEVLSDP 68 (546)
T ss_pred cchhhHHHHhCCCcccCHHHHHHHHHHHHHhcCCcccC----ChhHHHHHHHHHHHHHHHHHHhcCh
Confidence 45545677889999999999999999999999999985 3789999999999999999999874
No 26
>PRK14278 chaperone protein DnaJ; Provisional
Probab=98.82 E-value=3.5e-09 Score=107.34 Aligned_cols=56 Identities=20% Similarity=0.284 Sum_probs=49.5
Q ss_pred CCCcccCCCCCCChhHHHHHHHHHHHhhCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011849 410 SGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISED 473 (476)
Q Consensus 410 s~WK~VGmsdLaTp~eVKKAYRKAaLkvHPDKL~qrGa~~EQK~IAE~VF~eLNEAYE~Fkdee 473 (476)
.-|+.|||...++.++||+||||+++++||||++. ..|+..|++|++||++|.+.+
T Consensus 4 d~y~iLgv~~~a~~~eik~ayr~la~~~hpD~~~~--------~~a~~~f~~i~~Ay~vL~d~~ 59 (378)
T PRK14278 4 DYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPD--------EEAQEKFKEISVAYEVLSDPE 59 (378)
T ss_pred CcceecCCCCCCCHHHHHHHHHHHHHHHCCCCCCc--------HHHHHHHHHHHHHHHHhchhh
Confidence 35889999999999999999999999999999852 147889999999999998754
No 27
>PRK14297 chaperone protein DnaJ; Provisional
Probab=98.81 E-value=3.9e-09 Score=106.87 Aligned_cols=57 Identities=23% Similarity=0.336 Sum_probs=50.1
Q ss_pred CCCcccCCCCCCChhHHHHHHHHHHHhhCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011849 410 SGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISED 473 (476)
Q Consensus 410 s~WK~VGmsdLaTp~eVKKAYRKAaLkvHPDKL~qrGa~~EQK~IAE~VF~eLNEAYE~Fkdee 473 (476)
.-|+.|||...++.++||+||||+++++||||++.. ..|+.+|++|++||++|++..
T Consensus 5 d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~-------~~a~~~f~~i~~Ay~vL~d~~ 61 (380)
T PRK14297 5 DYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGN-------KEAEEKFKEINEAYQVLSDPQ 61 (380)
T ss_pred ChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc-------HHHHHHHHHHHHHHHHhcCHh
Confidence 458899999999999999999999999999998631 147889999999999998853
No 28
>PRK14280 chaperone protein DnaJ; Provisional
Probab=98.81 E-value=4.3e-09 Score=106.53 Aligned_cols=56 Identities=20% Similarity=0.339 Sum_probs=49.4
Q ss_pred CCCcccCCCCCCChhHHHHHHHHHHHhhCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011849 410 SGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISED 473 (476)
Q Consensus 410 s~WK~VGmsdLaTp~eVKKAYRKAaLkvHPDKL~qrGa~~EQK~IAE~VF~eLNEAYE~Fkdee 473 (476)
.-|+.|||...++.++||+||||+++++||||++.. .|+.+|++|++||++|++..
T Consensus 5 ~~y~iLgv~~~a~~~eik~ayr~la~~~HpD~~~~~--------~a~~~f~~i~~Ay~vL~d~~ 60 (376)
T PRK14280 5 DYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEE--------GADEKFKEISEAYEVLSDDQ 60 (376)
T ss_pred ChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc--------cHHHHHHHHHHHHHHhccHh
Confidence 458899999999999999999999999999998631 37789999999999998754
No 29
>PRK10266 curved DNA-binding protein CbpA; Provisional
Probab=98.80 E-value=4.6e-09 Score=103.44 Aligned_cols=55 Identities=22% Similarity=0.346 Sum_probs=48.8
Q ss_pred CCCcccCCCCCCChhHHHHHHHHHHHhhCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHhhc
Q 011849 410 SGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISE 472 (476)
Q Consensus 410 s~WK~VGmsdLaTp~eVKKAYRKAaLkvHPDKL~qrGa~~EQK~IAE~VF~eLNEAYE~Fkde 472 (476)
.-|+.|||...++.++|||||||+++++||||+.. ..|+.+|++|++||++|++.
T Consensus 5 d~y~~Lgv~~~a~~~eik~ayr~la~k~HPD~~~~--------~~~~~~f~~i~~Ay~~L~~~ 59 (306)
T PRK10266 5 DYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKE--------PDAEARFKEVAEAWEVLSDE 59 (306)
T ss_pred ChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--------ccHHHHHHHHHHHHHHhhhH
Confidence 45889999999999999999999999999999642 14788999999999999874
No 30
>PRK14281 chaperone protein DnaJ; Provisional
Probab=98.80 E-value=5e-09 Score=106.87 Aligned_cols=57 Identities=26% Similarity=0.416 Sum_probs=49.7
Q ss_pred CCCcccCCCCCCChhHHHHHHHHHHHhhCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011849 410 SGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISED 473 (476)
Q Consensus 410 s~WK~VGmsdLaTp~eVKKAYRKAaLkvHPDKL~qrGa~~EQK~IAE~VF~eLNEAYE~Fkdee 473 (476)
.-|+.|||...++..+|||||||+++++||||++.. ..|+..|++||+||++|++..
T Consensus 4 d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~-------~~a~~~f~~i~~Ay~vL~d~~ 60 (397)
T PRK14281 4 DYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDN-------KEAEEHFKEVNEAYEVLSNDD 60 (397)
T ss_pred ChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCc-------hHHHHHHHHHHHHHHHhhhhh
Confidence 358899999999999999999999999999998631 147789999999999998753
No 31
>PRK14291 chaperone protein DnaJ; Provisional
Probab=98.80 E-value=4.6e-09 Score=106.54 Aligned_cols=56 Identities=20% Similarity=0.293 Sum_probs=49.2
Q ss_pred CCCcccCCCCCCChhHHHHHHHHHHHhhCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011849 410 SGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISED 473 (476)
Q Consensus 410 s~WK~VGmsdLaTp~eVKKAYRKAaLkvHPDKL~qrGa~~EQK~IAE~VF~eLNEAYE~Fkdee 473 (476)
.-|+.|||...++.++||+||||+++++||||++. ..|+..|++|++||++|++..
T Consensus 4 d~Y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~--------~~~~~~f~~i~~Ay~vLsd~~ 59 (382)
T PRK14291 4 DYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKN--------PEAEEKFKEINEAYQVLSDPE 59 (382)
T ss_pred CHHHhhCCCCCCCHHHHHHHHHHHHHHHCCCCCCC--------ccHHHHHHHHHHHHHHhcCHH
Confidence 35789999999999999999999999999999863 136788999999999998753
No 32
>PRK14301 chaperone protein DnaJ; Provisional
Probab=98.80 E-value=4.8e-09 Score=106.20 Aligned_cols=57 Identities=23% Similarity=0.332 Sum_probs=49.6
Q ss_pred CCCcccCCCCCCChhHHHHHHHHHHHhhCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011849 410 SGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISED 473 (476)
Q Consensus 410 s~WK~VGmsdLaTp~eVKKAYRKAaLkvHPDKL~qrGa~~EQK~IAE~VF~eLNEAYE~Fkdee 473 (476)
.-|+.|||...++.++||+||||+++++||||++.. ..|+..|++|++||++|++..
T Consensus 5 ~~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~-------~~a~~~f~~i~~Ay~vL~d~~ 61 (373)
T PRK14301 5 DYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDN-------PEAEQKFKEAAEAYEVLRDAE 61 (373)
T ss_pred ChHHhcCCCCCCCHHHHHHHHHHHHHHhCCCcCCCC-------hHHHHHHHHHHHHHHHhcchh
Confidence 458899999999999999999999999999998631 137788999999999998753
No 33
>PRK14298 chaperone protein DnaJ; Provisional
Probab=98.79 E-value=4.6e-09 Score=106.60 Aligned_cols=56 Identities=25% Similarity=0.382 Sum_probs=49.2
Q ss_pred CCCcccCCCCCCChhHHHHHHHHHHHhhCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011849 410 SGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISED 473 (476)
Q Consensus 410 s~WK~VGmsdLaTp~eVKKAYRKAaLkvHPDKL~qrGa~~EQK~IAE~VF~eLNEAYE~Fkdee 473 (476)
.-|+.|||...++.++|||||||+++++||||++. . .|+..|++||+||++|++..
T Consensus 6 d~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~-~-------~~~~~f~~i~~Ay~vL~d~~ 61 (377)
T PRK14298 6 DYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKE-P-------DAEEKFKEISEAYAVLSDAE 61 (377)
T ss_pred CHHHhhCCCCCCCHHHHHHHHHHHHHHhCccccCC-h-------hHHHHHHHHHHHHHHhcchH
Confidence 45789999999999999999999999999999752 1 36789999999999998864
No 34
>PRK14290 chaperone protein DnaJ; Provisional
Probab=98.75 E-value=8.1e-09 Score=104.06 Aligned_cols=58 Identities=19% Similarity=0.257 Sum_probs=50.6
Q ss_pred CCCcccCCCCCCChhHHHHHHHHHHHhhCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011849 410 SGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISED 473 (476)
Q Consensus 410 s~WK~VGmsdLaTp~eVKKAYRKAaLkvHPDKL~qrGa~~EQK~IAE~VF~eLNEAYE~Fkdee 473 (476)
.-|+.|||...++.++||+||||+++++||||++. ....|+.+|++|++||++|++..
T Consensus 4 d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~------~~~~a~~~f~~i~~Ay~~L~d~~ 61 (365)
T PRK14290 4 DYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPG------NKAEAEEKFKEISEAYEVLSDPQ 61 (365)
T ss_pred ChhhhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC------chhHHHHHHHHHHHHHHHhcChh
Confidence 46889999999999999999999999999999752 12258899999999999999864
No 35
>PRK14300 chaperone protein DnaJ; Provisional
Probab=98.73 E-value=1.2e-08 Score=103.13 Aligned_cols=56 Identities=25% Similarity=0.330 Sum_probs=49.3
Q ss_pred CCCcccCCCCCCChhHHHHHHHHHHHhhCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011849 410 SGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISED 473 (476)
Q Consensus 410 s~WK~VGmsdLaTp~eVKKAYRKAaLkvHPDKL~qrGa~~EQK~IAE~VF~eLNEAYE~Fkdee 473 (476)
.-|+.|||...++.++||+||||+++++||||++. . .|+..|++|++||++|++..
T Consensus 4 ~~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~-~-------~~~~~f~~i~~Ay~~L~d~~ 59 (372)
T PRK14300 4 DYYQILGVSKTASQADLKKAYLKLAKQYHPDTTDA-K-------DAEKKFKEINAAYDVLKDEQ 59 (372)
T ss_pred ChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-c-------CHHHHHHHHHHHHHHhhhHh
Confidence 46899999999999999999999999999999752 1 36778999999999999754
No 36
>KOG0717 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.72 E-value=8.5e-09 Score=108.30 Aligned_cols=56 Identities=23% Similarity=0.358 Sum_probs=50.2
Q ss_pred CCCcccCCCCCCChhHHHHHHHHHHHhhCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHhh
Q 011849 410 SGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFIS 471 (476)
Q Consensus 410 s~WK~VGmsdLaTp~eVKKAYRKAaLkvHPDKL~qrGa~~EQK~IAE~VF~eLNEAYE~Fkd 471 (476)
+.|..|||...+++.+||++|||++|++||||++. + .+ .|+.+|..|+.||++|++
T Consensus 9 c~YE~L~v~~~a~d~eik~~YRklALq~HPDknpd-~--ie---eat~~F~~i~aAYeVLSd 64 (508)
T KOG0717|consen 9 CYYEVLGVERDADDDEIKKNYRKLALQYHPDKNPD-R--IE---EATQQFQLIQAAYEVLSD 64 (508)
T ss_pred HHHHHhcccccCCHHHHHHHHHHHHHhhCCCCCCc-c--HH---HHHHHHHHHHHHHHHhcC
Confidence 57889999999999999999999999999999763 2 33 589999999999999986
No 37
>KOG0719 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.70 E-value=1.4e-08 Score=99.67 Aligned_cols=59 Identities=29% Similarity=0.406 Sum_probs=54.4
Q ss_pred CCCcccCCCCCCChhHHHHHHHHHHHhhCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011849 410 SGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISED 473 (476)
Q Consensus 410 s~WK~VGmsdLaTp~eVKKAYRKAaLkvHPDKL~qrGa~~EQK~IAE~VF~eLNEAYE~Fkdee 473 (476)
+-|+.|||...+++.+|+|||+|+.|.+||||++ +|++..|+..|+.|+.||.+|.+++
T Consensus 15 d~YevLGVer~a~~~eIrkAY~klal~~HPDk~~-----eed~~ea~~kFq~l~k~y~iLsDee 73 (264)
T KOG0719|consen 15 DLYEVLGVERDATDKEIRKAYHKLALRLHPDKNH-----EEDKVEATEKFQQLQKAYQILSDEE 73 (264)
T ss_pred CHHHHhhhcccCCHHHHHHHHHHHHHHhCCCcch-----hhhHHHHHHHHHHHHHHHHHhhHHH
Confidence 4678999999999999999999999999999985 6888899999999999999998765
No 38
>PRK14293 chaperone protein DnaJ; Provisional
Probab=98.69 E-value=1.9e-08 Score=101.65 Aligned_cols=56 Identities=18% Similarity=0.290 Sum_probs=49.4
Q ss_pred CCCcccCCCCCCChhHHHHHHHHHHHhhCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011849 410 SGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISED 473 (476)
Q Consensus 410 s~WK~VGmsdLaTp~eVKKAYRKAaLkvHPDKL~qrGa~~EQK~IAE~VF~eLNEAYE~Fkdee 473 (476)
.-|+.|+|...++.++||+||||+++++|||+++.. .|+..|+.|++||++|++..
T Consensus 4 d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~--------~a~~~f~~i~~Ay~vL~~~~ 59 (374)
T PRK14293 4 DYYEILGVSRDADKDELKRAYRRLARKYHPDVNKEP--------GAEDRFKEINRAYEVLSDPE 59 (374)
T ss_pred ChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCc--------CHHHHHHHHHHHHHHHhchH
Confidence 458999999999999999999999999999997631 36778999999999998764
No 39
>KOG0691 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.67 E-value=1.7e-08 Score=100.94 Aligned_cols=56 Identities=27% Similarity=0.389 Sum_probs=49.8
Q ss_pred CCcccCCCCCCChhHHHHHHHHHHHhhCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011849 411 GWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISED 473 (476)
Q Consensus 411 ~WK~VGmsdLaTp~eVKKAYRKAaLkvHPDKL~qrGa~~EQK~IAE~VF~eLNEAYE~Fkdee 473 (476)
-|..|||...+++++||||||+.+|.+||||++. .| -|...|+.|.+||++|.+.+
T Consensus 7 yY~lLgi~~~at~~eIkKaYr~kaL~~HPDKNp~--dP-----~A~ekFq~L~eAy~VL~D~~ 62 (296)
T KOG0691|consen 7 YYDLLGISEDATDAEIKKAYRKKALQYHPDKNPG--DP-----QAAEKFQELSEAYEVLSDEE 62 (296)
T ss_pred HHHHhCCCCCCCHHHHHHHHHHHHHhcCCCCCCC--Ch-----HHHHHHHHHHHHHHHhcCHH
Confidence 4678899999999999999999999999999984 22 28899999999999998864
No 40
>PRK14292 chaperone protein DnaJ; Provisional
Probab=98.67 E-value=2e-08 Score=101.21 Aligned_cols=55 Identities=20% Similarity=0.369 Sum_probs=48.7
Q ss_pred CCcccCCCCCCChhHHHHHHHHHHHhhCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011849 411 GWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISED 473 (476)
Q Consensus 411 ~WK~VGmsdLaTp~eVKKAYRKAaLkvHPDKL~qrGa~~EQK~IAE~VF~eLNEAYE~Fkdee 473 (476)
-|+.|||...++.++||+||||+++++|||++.. ..|+..|+.|++||++|.+..
T Consensus 4 ~y~~Lgv~~~a~~~~ik~ayr~l~~~~hpD~~~~--------~~a~~~~~~i~~Ay~vL~d~~ 58 (371)
T PRK14292 4 YYELLGVSRTASADEIKSAYRKLALKYHPDRNKE--------KGAAEKFAQINEAYAVLSDAE 58 (371)
T ss_pred hHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCC--------hhHHHHHHHHHHHHHHhcchh
Confidence 4789999999999999999999999999999852 137788999999999998753
No 41
>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=98.66 E-value=3e-08 Score=85.87 Aligned_cols=57 Identities=25% Similarity=0.362 Sum_probs=49.5
Q ss_pred CCCcccCCCCCCChhHHHHHHHHHHHhhCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHhhc
Q 011849 410 SGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISE 472 (476)
Q Consensus 410 s~WK~VGmsdLaTp~eVKKAYRKAaLkvHPDKL~qrGa~~EQK~IAE~VF~eLNEAYE~Fkde 472 (476)
..|..|||...++..+||+||||+++++|||+++.. .. .|+..|..|++||++|++.
T Consensus 7 ~~y~iLgv~~~as~~eik~ayrkla~~~HPD~~~~~---~~---~a~~~f~~i~~Ay~vLsd~ 63 (237)
T COG2214 7 DYYEILGVPPNASLEEIKKAYRKLALKYHPDRNPGD---PK---VAEEKFKEINEAYEILSDP 63 (237)
T ss_pred hHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc---hh---HHHHHHHHHHHHHHHhhCH
Confidence 356788999999999999999999999999999742 11 6889999999999999874
No 42
>PRK14289 chaperone protein DnaJ; Provisional
Probab=98.65 E-value=2.5e-08 Score=101.14 Aligned_cols=56 Identities=23% Similarity=0.323 Sum_probs=49.4
Q ss_pred CCCcccCCCCCCChhHHHHHHHHHHHhhCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHhhc
Q 011849 410 SGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISE 472 (476)
Q Consensus 410 s~WK~VGmsdLaTp~eVKKAYRKAaLkvHPDKL~qrGa~~EQK~IAE~VF~eLNEAYE~Fkde 472 (476)
.-|+.|+|...++.++||+||||+++++||||++.. ..|+..|++|++||++|.+.
T Consensus 6 ~~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~-------~~a~~~f~~i~~Ay~~L~d~ 61 (386)
T PRK14289 6 DYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGD-------KEAEEKFKEAAEAYDVLSDP 61 (386)
T ss_pred CHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC-------hHHHHHHHHHHHHHHHhcCH
Confidence 468899999999999999999999999999998631 13788999999999999875
No 43
>KOG0716 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.62 E-value=3.2e-08 Score=98.34 Aligned_cols=55 Identities=25% Similarity=0.343 Sum_probs=47.8
Q ss_pred CCcccCCCCCCChhHHHHHHHHHHHhhCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHhhc
Q 011849 411 GWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISE 472 (476)
Q Consensus 411 ~WK~VGmsdLaTp~eVKKAYRKAaLkvHPDKL~qrGa~~EQK~IAE~VF~eLNEAYE~Fkde 472 (476)
-|..||+...+|.++|||+||++++++||||... + | .+..+|++||+||++|++.
T Consensus 33 LYdVLgl~k~at~d~IKKaYR~L~~k~HPD~~gd-~-P-----~~~dkf~eIN~Ay~ILsD~ 87 (279)
T KOG0716|consen 33 LYDVLGLPKTATKDEIKKAYRKLALKYHPDKNGD-N-P-----EATDKFKEINTAYAILSDP 87 (279)
T ss_pred HHHHhCCCcccchHHHHHHHHHHHHHhCCCcCCC-C-c-----hhHHHHHHHHHHHHHhcCh
Confidence 4678899999999999999999999999999863 2 2 3667899999999999875
No 44
>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.58 E-value=6e-08 Score=96.06 Aligned_cols=61 Identities=20% Similarity=0.309 Sum_probs=55.0
Q ss_pred ccCCCCCCcccCCCCCCChhHHHHHHHHHHHhhCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011849 405 VLWPNSGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISED 473 (476)
Q Consensus 405 VLWees~WK~VGmsdLaTp~eVKKAYRKAaLkvHPDKL~qrGa~~EQK~IAE~VF~eLNEAYE~Fkdee 473 (476)
++|....|+.|||...++..|||+||++++.++|||-+... .|+.+|++|.+|||+|.+++
T Consensus 39 ~~~~~d~Y~vLgv~~~At~~EIK~Af~~LaKkyHPD~n~~~--------~a~~kF~eI~~AYEiLsd~e 99 (288)
T KOG0715|consen 39 IISKEDYYKVLGVSRNATLSEIKSAFRKLAKKYHPDVNKDK--------EASKKFKEISEAYEILSDEE 99 (288)
T ss_pred cCCCcchhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCCc--------chhhHHHHHHHHHHHhcCHH
Confidence 46766789999999999999999999999999999998742 68999999999999998865
No 45
>PHA03102 Small T antigen; Reviewed
Probab=98.55 E-value=7.1e-08 Score=88.71 Aligned_cols=50 Identities=24% Similarity=0.274 Sum_probs=41.6
Q ss_pred cccCCCCCC--ChhHHHHHHHHHHHhhCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011849 413 CSVPLTSLI--ESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISED 473 (476)
Q Consensus 413 K~VGmsdLa--Tp~eVKKAYRKAaLkvHPDKL~qrGa~~EQK~IAE~VF~eLNEAYE~Fkdee 473 (476)
..|||...+ +..+||+|||++++++||||.. + +..|++||+||++|++..
T Consensus 9 ~vLGl~~~A~~s~~eIKkAYr~la~~~HPDkgg----~-------~e~~k~in~Ay~~L~d~~ 60 (153)
T PHA03102 9 DLLGLPRSAWGNLPLMRKAYLRKCLEFHPDKGG----D-------EEKMKELNTLYKKFRESV 60 (153)
T ss_pred HHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCc----h-------hHHHHHHHHHHHHHhhHH
Confidence 345688888 9999999999999999999942 1 246899999999998753
No 46
>PRK05014 hscB co-chaperone HscB; Provisional
Probab=98.50 E-value=2.1e-07 Score=85.98 Aligned_cols=60 Identities=20% Similarity=0.362 Sum_probs=50.5
Q ss_pred CCcccCCCCC--CChhHHHHHHHHHHHhhCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHhhc
Q 011849 411 GWCSVPLTSL--IESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISE 472 (476)
Q Consensus 411 ~WK~VGmsdL--aTp~eVKKAYRKAaLkvHPDKL~qrGa~~EQK~IAE~VF~eLNEAYE~Fkde 472 (476)
-|+.+||... ++..+||++||+++.++||||... .+...+.+|...|..||+||++|++-
T Consensus 3 yf~llgl~~~~~~d~~~L~~~yr~l~~~~HPDk~~~--~~~~~~~~a~~~s~~iN~AY~~L~dp 64 (171)
T PRK05014 3 YFTLFGLPARYDIDTQLLASRYQELQRQFHPDKFAN--ASERERLLAVQQAATINDAYQTLKHP 64 (171)
T ss_pred HHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCC--CcHHHHHHHHHHHHHHHHHHHHHCCh
Confidence 3567788874 788999999999999999999864 44556678999999999999999864
No 47
>PTZ00100 DnaJ chaperone protein; Provisional
Probab=98.50 E-value=1.6e-07 Score=83.32 Aligned_cols=52 Identities=15% Similarity=0.275 Sum_probs=44.3
Q ss_pred CCCCcccCCCCCCChhHHHHHHHHHHHhhCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHhh
Q 011849 409 NSGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFIS 471 (476)
Q Consensus 409 es~WK~VGmsdLaTp~eVKKAYRKAaLkvHPDKL~qrGa~~EQK~IAE~VF~eLNEAYE~Fkd 471 (476)
...|+.||+...++.++||++||++++++||||. | +. .+|.+|++||++|.+
T Consensus 65 ~eAy~ILGv~~~As~~eIkkaYRrLa~~~HPDkg---G-s~-------~~~~kIneAyevL~k 116 (116)
T PTZ00100 65 SEAYKILNISPTASKERIREAHKQLMLRNHPDNG---G-ST-------YIASKVNEAKDLLLK 116 (116)
T ss_pred HHHHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCC---C-CH-------HHHHHHHHHHHHHhC
Confidence 3578999999999999999999999999999983 3 22 357899999999853
No 48
>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional
Probab=98.41 E-value=2.1e-07 Score=104.89 Aligned_cols=56 Identities=13% Similarity=0.074 Sum_probs=49.6
Q ss_pred CCCcccCCCCCCChhHHHHHHHHHHHhhCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011849 410 SGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISED 473 (476)
Q Consensus 410 s~WK~VGmsdLaTp~eVKKAYRKAaLkvHPDKL~qrGa~~EQK~IAE~VF~eLNEAYE~Fkdee 473 (476)
.-|..|||...++..+|||||||+++++||||++. + .|...|+.|++||++|++..
T Consensus 574 dYYdILGVs~dAS~~EIKKAYRKLAlkyHPDKN~~---~-----~A~ekFq~I~EAYeVLSDp~ 629 (1136)
T PTZ00341 574 LFYDILGVGVNADMKEISERYFKLAENYYPPKRSG---N-----EGFHKFKKINEAYQILGDID 629 (1136)
T ss_pred ChHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---c-----hHHHHHHHHHHHHHHhCCHH
Confidence 56889999999999999999999999999999863 1 36779999999999998764
No 49
>KOG0721 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.40 E-value=3e-07 Score=89.43 Aligned_cols=61 Identities=21% Similarity=0.357 Sum_probs=49.8
Q ss_pred cccCCCCCCcccCCCCCCChhHHHHHHHHHHHhhCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011849 404 HVLWPNSGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISED 473 (476)
Q Consensus 404 ~VLWees~WK~VGmsdLaTp~eVKKAYRKAaLkvHPDKL~qrGa~~EQK~IAE~VF~eLNEAYE~Fkdee 473 (476)
..+| .-++.||+.+.++.++||||||++.+++||||++.-+ .-+..|+.|++||..+.++.
T Consensus 96 ~~~f--DPyEILGl~pgas~~eIKkaYR~LSik~HPDK~~~~~-------~~e~~~~~I~KAY~aLTD~~ 156 (230)
T KOG0721|consen 96 RQKF--DPYEILGLDPGASEKEIKKAYRRLSIKYHPDKQPPEE-------GDEEFFEAIAKAYQALTDKK 156 (230)
T ss_pred hhcC--CcHHhhCCCCCCCHHHHHHHHHHhhhhhCCCcCCCcc-------hhHHHHHHHHHHHHHhcchh
Confidence 3445 3578999999999999999999999999999987422 24566899999999987753
No 50
>PRK03578 hscB co-chaperone HscB; Provisional
Probab=98.36 E-value=7.3e-07 Score=83.01 Aligned_cols=61 Identities=18% Similarity=0.319 Sum_probs=51.0
Q ss_pred CCCcccCCCC--CCChhHHHHHHHHHHHhhCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHhhc
Q 011849 410 SGWCSVPLTS--LIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISE 472 (476)
Q Consensus 410 s~WK~VGmsd--LaTp~eVKKAYRKAaLkvHPDKL~qrGa~~EQK~IAE~VF~eLNEAYE~Fkde 472 (476)
.-|+.+|+.. .+++.+||++||++..++||||.++ .+...+.+|...+..||+||++|++.
T Consensus 7 dyf~llglp~~f~~d~~~L~~~yr~lq~~~HPD~~~~--~~~~e~~~a~~~s~~iN~AY~tL~~p 69 (176)
T PRK03578 7 DHFSLFGLPARFALDEAALDAAYRTVQAQVHPDRFAA--AGDAEKRVAMQWATRANEAYQTLRDP 69 (176)
T ss_pred CHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--CCHHHHHHHHHHHHHHHHHHHHhCCh
Confidence 3566778877 4788999999999999999999874 34566778889999999999999864
No 51
>PRK01356 hscB co-chaperone HscB; Provisional
Probab=98.32 E-value=8.6e-07 Score=81.78 Aligned_cols=57 Identities=25% Similarity=0.273 Sum_probs=47.6
Q ss_pred CCcccCCCCC--CChhHHHHHHHHHHHhhCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHhh
Q 011849 411 GWCSVPLTSL--IESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFIS 471 (476)
Q Consensus 411 ~WK~VGmsdL--aTp~eVKKAYRKAaLkvHPDKL~qrGa~~EQK~IAE~VF~eLNEAYE~Fkd 471 (476)
-|+.+||... ++..+||++||++.+++||||..+ ...+..+...|..||+||++|++
T Consensus 4 yf~llgl~~~f~id~~~L~~aYr~lq~~~HPDk~~~----~~~k~~~~~~s~~in~AY~~L~d 62 (166)
T PRK01356 4 YFQLLGLPQEYNIDLKILEKQYFAMQVKYHPDKAKT----LQEKEQNLIIASELNNAYSTLKD 62 (166)
T ss_pred HHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCC----HHHHHHHHHHHHHHHHHHHHhCC
Confidence 3567888885 789999999999999999999752 34556677789999999999986
No 52
>PRK00294 hscB co-chaperone HscB; Provisional
Probab=98.32 E-value=1.2e-06 Score=81.68 Aligned_cols=60 Identities=17% Similarity=0.318 Sum_probs=49.7
Q ss_pred CCcccCCCCC--CChhHHHHHHHHHHHhhCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHhhc
Q 011849 411 GWCSVPLTSL--IESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISE 472 (476)
Q Consensus 411 ~WK~VGmsdL--aTp~eVKKAYRKAaLkvHPDKL~qrGa~~EQK~IAE~VF~eLNEAYE~Fkde 472 (476)
.+..+|+... ++..+||++||++..++||||... .+...+.+|...|..||+||++|++.
T Consensus 6 ~F~l~~l~~~f~id~~~L~~~Yr~Lq~~~HPDk~~~--~~~~e~~~a~~~s~~IN~AY~~L~~p 67 (173)
T PRK00294 6 HFALFDLQPSFRLDLDQLATRYRELAREVHPDRFAD--APEREQRLALERSASLNEAYQTLKSP 67 (173)
T ss_pred hhhhcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--CcHHHHHHHHHHHHHHHHHHHHhCCh
Confidence 3556666664 788999999999999999999864 45556678889999999999999864
No 53
>KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.32 E-value=8.1e-07 Score=93.19 Aligned_cols=98 Identities=22% Similarity=0.318 Sum_probs=76.6
Q ss_pred hhhhhhhhhhhhHHHHHHHHhc----CCCCcHHHHHHhcCccc----CCCCCCcccCCCCCCChhHHHHHHHHHHHhhCC
Q 011849 368 KEQSQDDIETELLDEEIRLWSA----GKETNIRLLLSALHHVL----WPNSGWCSVPLTSLIESSHVKKAYQKARLCLHP 439 (476)
Q Consensus 368 ~eqeE~~~~~D~Id~KI~~Wa~----GKe~NIRALLSTLh~VL----Wees~WK~VGmsdLaTp~eVKKAYRKAaLkvHP 439 (476)
+++.+-+.+.++.+.-|+.... -+.-+||.+|--.+.-| | ..-|+.||+..+++..+|||||||++|.+||
T Consensus 325 l~ra~c~l~le~~e~AV~d~~~a~q~~~s~e~r~~l~~A~~aLkkSkR-kd~ykilGi~~~as~~eikkayrk~AL~~Hp 403 (486)
T KOG0550|consen 325 LRRANCHLALEKWEEAVEDYEKAMQLEKDCEIRRTLREAQLALKKSKR-KDWYKILGISRNASDDEIKKAYRKLALVHHP 403 (486)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhhh-hhHHHHhhhhhhcccchhhhHHHHHHHHhCC
Confidence 5555556666666666666542 34467888888776655 4 2357899999999999999999999999999
Q ss_pred CccccCCCCHHHHHHHHHHHHHHHHHHHHHhhc
Q 011849 440 DKLQQRGATAQQKYVAEKVFSVLQDAWSAFISE 472 (476)
Q Consensus 440 DKL~qrGa~~EQK~IAE~VF~eLNEAYE~Fkde 472 (476)
||+. |. ++.||.+|+++-+||.++.+-
T Consensus 404 d~~a--gs----q~eaE~kFkevgeAy~il~d~ 430 (486)
T KOG0550|consen 404 DKNA--GS----QKEAEAKFKEVGEAYTILSDP 430 (486)
T ss_pred CcCc--ch----hHHHHHHHHHHHHHHHHhcCH
Confidence 9986 32 578999999999999999763
No 54
>KOG0720 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.30 E-value=4.8e-07 Score=95.32 Aligned_cols=55 Identities=29% Similarity=0.396 Sum_probs=49.9
Q ss_pred CCCcccCCCCCCChhHHHHHHHHHHHhhCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHhhc
Q 011849 410 SGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISE 472 (476)
Q Consensus 410 s~WK~VGmsdLaTp~eVKKAYRKAaLkvHPDKL~qrGa~~EQK~IAE~VF~eLNEAYE~Fkde 472 (476)
..|-.+|+...+++++|||.|||++..+||||+.+. .|+++|+.|+.||+++.+.
T Consensus 236 daYsvlGl~~d~sd~~lKk~Yrk~A~LVhPDKn~~~--------~A~Eafk~Lq~Afevig~~ 290 (490)
T KOG0720|consen 236 DAYSALGLPSDCSDADLKKNYRKKAMLVHPDKNMIP--------RAEEAFKKLQVAFEVIGDS 290 (490)
T ss_pred CchhhcCCCCCCCHHHHHHHHHhhceEeCCCccCCh--------hHHHHHHHHHHHHHHhcch
Confidence 478899999999999999999999999999999742 6999999999999998764
No 55
>TIGR00714 hscB Fe-S protein assembly co-chaperone HscB. This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock.
Probab=98.14 E-value=3.8e-06 Score=76.77 Aligned_cols=50 Identities=22% Similarity=0.379 Sum_probs=42.4
Q ss_pred CChhHHHHHHHHHHHhhCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHhhc
Q 011849 421 IESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISE 472 (476)
Q Consensus 421 aTp~eVKKAYRKAaLkvHPDKL~qrGa~~EQK~IAE~VF~eLNEAYE~Fkde 472 (476)
++..+|+++||++..++||||.++. +...+..|...|..||+||++|++.
T Consensus 3 iD~~~L~~~yr~lq~~~HPD~~~~~--~~~~~~~a~~~s~~iN~AY~~L~~p 52 (157)
T TIGR00714 3 LDTQALSLRYQDLQRQYHPDKFASG--SAQEQLAAVQQSTTLNQAYQTLKDP 52 (157)
T ss_pred CCHHHHHHHHHHHHHHHCcCCCCCC--ChhhhHHHHHHHHHHHHHHHHhCCh
Confidence 5789999999999999999998643 3445567889999999999999863
No 56
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ. This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.
Probab=98.14 E-value=2.4e-06 Score=94.79 Aligned_cols=55 Identities=18% Similarity=0.271 Sum_probs=48.2
Q ss_pred CCCcccCCCCCCChhHHHHHHHHHHHhhCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHhhc
Q 011849 410 SGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISE 472 (476)
Q Consensus 410 s~WK~VGmsdLaTp~eVKKAYRKAaLkvHPDKL~qrGa~~EQK~IAE~VF~eLNEAYE~Fkde 472 (476)
.-|+.|||...++..+||++|||+++++||||... ..|+.+|+.|++||++|++.
T Consensus 3 DYYeVLGVs~dAS~eEIKKAYRKLAKKyHPDKn~~--------~eAeekFqeINEAYEVLSDP 57 (871)
T TIGR03835 3 DYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKA--------PDAASIFAEINEANDVLSNP 57 (871)
T ss_pred ChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--------hhHHHHHHHHHHHHHHhCCH
Confidence 35789999999999999999999999999999753 14677899999999999864
No 57
>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]
Probab=98.06 E-value=3.6e-06 Score=89.24 Aligned_cols=84 Identities=18% Similarity=0.255 Sum_probs=65.9
Q ss_pred HHHHhc-C-CCCcHHHHHHhcCcccCCCCCCcccCCCCCCChhHHHHHHHHHHHhhCCCccccCCCCHHHHHHHHHHHHH
Q 011849 384 IRLWSA-G-KETNIRLLLSALHHVLWPNSGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSV 461 (476)
Q Consensus 384 I~~Wa~-G-Ke~NIRALLSTLh~VLWees~WK~VGmsdLaTp~eVKKAYRKAaLkvHPDKL~qrGa~~EQK~IAE~VF~e 461 (476)
|-.|.- | =--|||. |.-+-.=+|+ -|+.||++...+..+||++||++..++||||++. ...+.+..-|+.+.+
T Consensus 74 ivgWl~i~~L~~~I~~-~k~~~~~~fD--PyEILGI~~~ts~rdik~~yr~Ls~KfhpdK~~~--mvn~~rse~Ee~y~~ 148 (610)
T COG5407 74 IVGWLVISYLISNIRT-LKIEYRRGFD--PYEILGIDQDTSERDIKKRYRMLSMKFHPDKAPP--MVNELRSEYEEKYKT 148 (610)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHcCCC--hHHhhcccCCCcHHHHHHHHHhheeecChhhcCC--CChhHHHHHHHHHHH
Confidence 667763 0 1113444 3444445673 6889999999999999999999999999999974 667888899999999
Q ss_pred HHHHHHHHhhc
Q 011849 462 LQDAWSAFISE 472 (476)
Q Consensus 462 LNEAYE~Fkde 472 (476)
|++||..+.++
T Consensus 149 ItkAY~~lTd~ 159 (610)
T COG5407 149 ITKAYGLLTDK 159 (610)
T ss_pred HHHHHHhhhhH
Confidence 99999998764
No 58
>KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms]
Probab=98.05 E-value=1.2e-05 Score=83.70 Aligned_cols=61 Identities=23% Similarity=0.267 Sum_probs=56.4
Q ss_pred CCCcccCCCCCCChhHHHHHHHHHHHhhCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHhhccC
Q 011849 410 SGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISEDV 474 (476)
Q Consensus 410 s~WK~VGmsdLaTp~eVKKAYRKAaLkvHPDKL~qrGa~~EQK~IAE~VF~eLNEAYE~Fkdee~ 474 (476)
.-||.|||...++-.+|-|||||++.++|||--+ .+|.|..|+.+|+-|..|-++|.+.++
T Consensus 395 DYYKILGVkRnAsKqEI~KAYRKlAqkWHPDNFq----dEeEKKkAEKKFIDIAAAKEVLsd~Ek 455 (504)
T KOG0624|consen 395 DYYKILGVKRNASKQEITKAYRKLAQKWHPDNFQ----DEEEKKKAEKKFIDIAAAKEVLSDPEK 455 (504)
T ss_pred hHHHHhhhcccccHHHHHHHHHHHHHhcCCcccc----CHHHHHHHHHhhhhHHHHHHhhcCHHH
Confidence 4689999999999999999999999999999986 378899999999999999999998775
No 59
>PHA02624 large T antigen; Provisional
Probab=98.04 E-value=4.8e-06 Score=90.82 Aligned_cols=50 Identities=22% Similarity=0.247 Sum_probs=42.8
Q ss_pred CcccCCCCCC--ChhHHHHHHHHHHHhhCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHhhc
Q 011849 412 WCSVPLTSLI--ESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISE 472 (476)
Q Consensus 412 WK~VGmsdLa--Tp~eVKKAYRKAaLkvHPDKL~qrGa~~EQK~IAE~VF~eLNEAYE~Fkde 472 (476)
|+.||+...+ +..+||+||||+++++||||. | + +..|++||+||++|.+.
T Consensus 14 yelLGL~~~A~gs~~eIKkAYRkLAkkyHPDKg---G-d-------eekfk~Ln~AYevL~d~ 65 (647)
T PHA02624 14 MDLLGLPMAAWGNLPLMRKAYLRKCKEYHPDKG---G-D-------EEKMKRLNSLYKKLQEG 65 (647)
T ss_pred HHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCC---C-c-------HHHHHHHHHHHHHHhcH
Confidence 4677888888 999999999999999999994 2 2 34699999999999874
No 60
>KOG0714 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.03 E-value=3e-06 Score=77.55 Aligned_cols=56 Identities=29% Similarity=0.385 Sum_probs=46.4
Q ss_pred CCcccCCCCCCChhHHHHHHHHHHHhhCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHhhc
Q 011849 411 GWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISE 472 (476)
Q Consensus 411 ~WK~VGmsdLaTp~eVKKAYRKAaLkvHPDKL~qrGa~~EQK~IAE~VF~eLNEAYE~Fkde 472 (476)
-++.++|...++..+||+||+|+++++||||++. . +..|+..|++|++||+++.+.
T Consensus 5 ~~~~l~i~~~as~~~i~ka~~~~a~~~hpdk~~~-----~-~~~~~~~~~~~~ea~~~ls~~ 60 (306)
T KOG0714|consen 5 YYKILGIARSASEEDIKKAYRKLALKYHPDKNPS-----P-KEVAEAKFKEIAEAYEVLSDP 60 (306)
T ss_pred HHHHhCccccccHHHHHHHHHHHHHhhCCCCCCC-----c-hhhHHHHHhhhhccccccCCH
Confidence 4677889888888899999999999999999653 3 445666999999999987653
No 61
>KOG1150 consensus Predicted molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=97.99 E-value=5.4e-06 Score=80.66 Aligned_cols=56 Identities=21% Similarity=0.431 Sum_probs=49.2
Q ss_pred CCcccCCCCCCChhHHHHHHHHHHHhhCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHhhc
Q 011849 411 GWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISE 472 (476)
Q Consensus 411 ~WK~VGmsdLaTp~eVKKAYRKAaLkvHPDKL~qrGa~~EQK~IAE~VF~eLNEAYE~Fkde 472 (476)
.|..|.|.+.++.++|||-|||+.+.+||||++. ...-|...|.+|..||..|.++
T Consensus 55 pfeVLqIdpev~~edikkryRklSilVHPDKN~D------d~~rAqkAFdivkKA~k~l~n~ 110 (250)
T KOG1150|consen 55 PFEVLQIDPEVTDEDIKKRYRKLSILVHPDKNPD------DAERAQKAFDIVKKAYKLLEND 110 (250)
T ss_pred hHHHHhcCCCCCHHHHHHHHHhhheeecCCCCcc------cHHHHHHHHHHHHHHHHHHhCH
Confidence 5678899999999999999999999999999974 2346899999999999988654
No 62
>TIGR02349 DnaJ_bact chaperone protein DnaJ. This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.
Probab=97.76 E-value=2.8e-05 Score=78.00 Aligned_cols=32 Identities=25% Similarity=0.379 Sum_probs=30.6
Q ss_pred CcccCCCCCCChhHHHHHHHHHHHhhCCCccc
Q 011849 412 WCSVPLTSLIESSHVKKAYQKARLCLHPDKLQ 443 (476)
Q Consensus 412 WK~VGmsdLaTp~eVKKAYRKAaLkvHPDKL~ 443 (476)
|+.|||...++.++||+||||+++++||||++
T Consensus 3 y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~ 34 (354)
T TIGR02349 3 YEILGVSKDASEEEIKKAYRKLAKKYHPDRNK 34 (354)
T ss_pred HHhCCCCCCCCHHHHHHHHHHHHHHHCCCCCC
Confidence 78899999999999999999999999999985
No 63
>KOG0722 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=97.63 E-value=1.9e-05 Score=79.16 Aligned_cols=56 Identities=18% Similarity=0.351 Sum_probs=48.7
Q ss_pred CCCcccCCCCCCChhHHHHHHHHHHHhhCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011849 410 SGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISED 473 (476)
Q Consensus 410 s~WK~VGmsdLaTp~eVKKAYRKAaLkvHPDKL~qrGa~~EQK~IAE~VF~eLNEAYE~Fkdee 473 (476)
.-|..|||+..+...+|+||||++++++|||+++. . | ++..|..|..||+++++++
T Consensus 34 nCYdVLgV~Rea~KseIakAYRqLARrhHPDr~r~--~--e----~k~~F~~iAtayeilkd~e 89 (329)
T KOG0722|consen 34 NCYDVLGVAREANKSEIAKAYRQLARRHHPDRNRD--P--E----SKKLFVKIATAYEILKDNE 89 (329)
T ss_pred hHHHHhhhhhhccHHHHHHHHHHHHHHhCCcccCC--c--h----hhhhhhhhhcccccccchh
Confidence 45789999999999999999999999999999973 2 2 3478999999999998865
No 64
>PRK01773 hscB co-chaperone HscB; Provisional
Probab=97.49 E-value=0.00024 Score=66.37 Aligned_cols=57 Identities=19% Similarity=0.313 Sum_probs=48.3
Q ss_pred cccCCCC--CCChhHHHHHHHHHHHhhCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHhh
Q 011849 413 CSVPLTS--LIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFIS 471 (476)
Q Consensus 413 K~VGmsd--LaTp~eVKKAYRKAaLkvHPDKL~qrGa~~EQK~IAE~VF~eLNEAYE~Fkd 471 (476)
+.+|+.. .++..++++.|+++...+||||..+ .+...+.+|...=..||+||.+|++
T Consensus 6 ~lf~lp~~F~iD~~~L~~~y~~Lq~~~HPD~f~~--~~~~eq~~a~~~ss~iN~AY~tLkd 64 (173)
T PRK01773 6 ALFDLPVDFQLDNALLSERYLALQKSLHPDNFAN--SSAQEQRLAMQKSAEVNDALQILKD 64 (173)
T ss_pred HhcCCCCCCCCCHHHHHHHHHHHHHHhCcCcccC--CCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 4455655 4899999999999999999999975 4567778898899999999999986
No 65
>KOG1789 consensus Endocytosis protein RME-8, contains DnaJ domain [Intracellular trafficking, secretion, and vesicular transport; Posttranslational modification, protein turnover, chaperones]
Probab=97.24 E-value=0.0004 Score=79.93 Aligned_cols=41 Identities=24% Similarity=0.477 Sum_probs=36.0
Q ss_pred ChhHHHHHHHHHHHhhCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHhhc
Q 011849 422 ESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISE 472 (476)
Q Consensus 422 Tp~eVKKAYRKAaLkvHPDKL~qrGa~~EQK~IAE~VF~eLNEAYE~Fkde 472 (476)
.+.+|||+|+|++.++||||++. ...+|..+|+|||.|+.+
T Consensus 1298 ~~~KirrqY~kLA~kYHPDKNPE----------GRemFe~VnKAYE~L~~~ 1338 (2235)
T KOG1789|consen 1298 KPAKIRRQYYKLAAKYHPDKNPE----------GREMFERVNKAYELLSSE 1338 (2235)
T ss_pred cHHHHHHHHHHHHHHhCCCCCch----------HHHHHHHHHHHHHHHHHH
Confidence 45899999999999999999983 467899999999999854
No 66
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=97.05 E-value=0.00051 Score=63.32 Aligned_cols=60 Identities=20% Similarity=0.255 Sum_probs=55.3
Q ss_pred CCCcccCCCCCCChhHHHHHHHHHHHhhCCCccccCCCCHHHHHHHHHHHHHHHHHHHHH
Q 011849 410 SGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAF 469 (476)
Q Consensus 410 s~WK~VGmsdLaTp~eVKKAYRKAaLkvHPDKL~qrGa~~EQK~IAE~VF~eLNEAYE~F 469 (476)
..++.+++....+..+||++||+++...|||++...|.+.+...+++.++.+|++||+.+
T Consensus 114 ~~l~~l~~~~~~~~~~i~~~~r~l~~e~~~d~a~~~~~~~e~~~~~~~~~~~i~~a~~~~ 173 (174)
T COG1076 114 DALKVLGVEIKADQDAIKKAYRKLLSEQHPDKAAAKGLKLEFIEKLKEKLQEIQEAYEDI 173 (174)
T ss_pred hHHHHhcCchhhhHHHHHHHHHHHHHhcCHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhc
Confidence 457788888899999999999999999999999999999999999999999999999864
No 67
>KOG0723 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=96.46 E-value=0.0051 Score=55.00 Aligned_cols=50 Identities=24% Similarity=0.395 Sum_probs=41.3
Q ss_pred cccCCCCCCChhHHHHHHHHHHHhhCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011849 413 CSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISED 473 (476)
Q Consensus 413 K~VGmsdLaTp~eVKKAYRKAaLkvHPDKL~qrGa~~EQK~IAE~VF~eLNEAYE~Fkdee 473 (476)
..|+|.+.++.++||.|.||+++..||||- | ++ |+| ..||+|++.|....
T Consensus 60 lIL~v~~s~~k~KikeaHrriM~~NHPD~G---G-SP---YlA----sKINEAKdlLe~~~ 109 (112)
T KOG0723|consen 60 LILGVTPSLDKDKIKEAHRRIMLANHPDRG---G-SP---YLA----SKINEAKDLLEGTS 109 (112)
T ss_pred HHhCCCccccHHHHHHHHHHHHHcCCCcCC---C-CH---HHH----HHHHHHHHHHhccc
Confidence 467899999999999999999999999995 2 22 355 36999999997654
No 68
>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]
Probab=95.78 E-value=0.0093 Score=60.98 Aligned_cols=49 Identities=22% Similarity=0.297 Sum_probs=40.1
Q ss_pred CCChhHHHHHHHHHHHhhCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHhhcc
Q 011849 420 LIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISED 473 (476)
Q Consensus 420 LaTp~eVKKAYRKAaLkvHPDKL~qrGa~~EQK~IAE~VF~eLNEAYE~Fkdee 473 (476)
-+++.+|++|.+|-++++||||... |.+. -+...|..|+.||++|.+-.
T Consensus 57 ka~~~qi~kah~kkv~kyHPDk~aa-~g~~----~~d~fFk~iqkA~evL~D~~ 105 (379)
T COG5269 57 KAIPPQILKAHKKKVYKYHPDKTAA-GGNK----GCDEFFKLIQKAREVLGDRK 105 (379)
T ss_pred CCCcHHHHHHHHHHHHHhCccchhc-cCCC----CcHHHHHHHHHHHHHhccHH
Confidence 4578999999999999999999854 3332 25778999999999998754
No 69
>KOG0568 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=88.74 E-value=0.67 Score=47.05 Aligned_cols=64 Identities=19% Similarity=0.274 Sum_probs=47.3
Q ss_pred cHHHHHHhcCc---ccCCCCCCcccCCCCCCChhHHHHHHHHHHHhhCCCccccCCCCHHHHHHHHHHHHHHHHHHH
Q 011849 394 NIRLLLSALHH---VLWPNSGWCSVPLTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWS 467 (476)
Q Consensus 394 NIRALLSTLh~---VLWees~WK~VGmsdLaTp~eVKKAYRKAaLkvHPDKL~qrGa~~EQK~IAE~VF~eLNEAYE 467 (476)
=||.-|..||. ++- --+..|||.+.++.++|+-+|.+++..+|||--.. . .....|..|-+||.
T Consensus 31 iirnrll~~~kske~~~--e~fril~v~e~~~adevr~af~~lakq~hpdsgs~-~-------adaa~f~qideafr 97 (342)
T KOG0568|consen 31 IIRNRLLHLHKSKEKIM--ECFRILGVEEGADADEVREAFHDLAKQVHPDSGSE-E-------ADAARFIQIDEAFR 97 (342)
T ss_pred hHHHHHHHHhhhHHHHH--HHHHHhcccccCchhHHHHHHHHHHHHcCCCCCCc-c-------ccHHHHHHHHHHHH
Confidence 36666666663 111 13567899999999999999999999999998542 1 22355888888887
No 70
>PF14687 DUF4460: Domain of unknown function (DUF4460)
Probab=81.97 E-value=3.8 Score=36.50 Aligned_cols=50 Identities=20% Similarity=0.341 Sum_probs=41.3
Q ss_pred CCChhHHHHHHHHHHHhhCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHhhc
Q 011849 420 LIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFISE 472 (476)
Q Consensus 420 LaTp~eVKKAYRKAaLkvHPDKL~qrGa~~EQK~IAE~VF~eLNEAYE~Fkde 472 (476)
..+..++|.|.|+..++||||-..+ .++++.+=+.-++.||.=.+.++..
T Consensus 5 ~~~~~~l~~aLr~Fy~~VHPDlF~~---~P~~k~~Ne~SLk~Ln~~Ld~l~~~ 54 (112)
T PF14687_consen 5 NLSSPDLRSALRPFYFAVHPDLFGQ---HPEEKQVNEESLKLLNSYLDSLKKR 54 (112)
T ss_pred hhhhHHHHHHHHHHHHHhCCccccc---ChHHHHhhHHHHHHHHHHHHHHhcc
Confidence 3456889999999999999999864 3567778888899999988888764
No 71
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=71.49 E-value=7.2 Score=36.27 Aligned_cols=46 Identities=17% Similarity=0.320 Sum_probs=37.4
Q ss_pred hHHHHHHHHHHHhhCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHhh
Q 011849 424 SHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFIS 471 (476)
Q Consensus 424 ~eVKKAYRKAaLkvHPDKL~qrGa~~EQK~IAE~VF~eLNEAYE~Fkd 471 (476)
+..+..|+.+...+|||+... ++...+..+-..+..+|.||.++++
T Consensus 18 ~~l~~~~~~~~~~~~~dr~~~--~~~~~~~~~l~~~~~~~~a~~tLk~ 63 (174)
T COG1076 18 DALKLQYRELQRAYHPDRFGK--ASEAEQRKALQQSAEVNPAYQTLKD 63 (174)
T ss_pred hHhhhhHHHHHHhhCcccccc--cchHHHHHHHHHHHHhcchHHHHHH
Confidence 567899999999999999864 3445555666789999999999876
No 72
>PF08628 Nexin_C: Sorting nexin C terminal; InterPro: IPR013937 This region is found at the C terminus of proteins belonging to the nexin family. It is found on proteins which also contain IPR001683 from INTERPRO.
Probab=69.06 E-value=9.4 Score=32.77 Aligned_cols=84 Identities=19% Similarity=0.386 Sum_probs=49.4
Q ss_pred hhhHHHHHHHHhcCCCCcHHHHHHhcCcccCCCCCCcccCCCCCCChhH---HHHHHHHHHHhhCCCccccCCCCHHHHH
Q 011849 377 TELLDEEIRLWSAGKETNIRLLLSALHHVLWPNSGWCSVPLTSLIESSH---VKKAYQKARLCLHPDKLQQRGATAQQKY 453 (476)
Q Consensus 377 ~D~Id~KI~~Wa~GKe~NIRALLSTLh~VLWees~WK~VGmsdLaTp~e---VKKAYRKAaLkvHPDKL~qrGa~~EQK~ 453 (476)
...|..+|..... +.+|=.+|..|++.|||+..|.+-.- .-|+++ -++.=+++++..=||-+..-=....-+.
T Consensus 24 ~r~i~~~v~~l~s--e~~v~~~i~~l~~~lwP~g~~~~~~~--~Rt~~ek~~tr~~A~~~L~~~~P~~l~~vvG~~~~~~ 99 (113)
T PF08628_consen 24 ERKIRDQVEWLTS--EEQVARYIQLLRESLWPNGKLAEPPP--PRTEEEKLRTRQEARELLLSLLPDTLKKVVGSENSRR 99 (113)
T ss_pred HHHHHHHHHHHcC--HHHHHHHHHHHHHhhCCCCCCCCCCC--CCCHHHHHHHHHHHHHHHHHhcHHHHHHccCHHHHHH
Confidence 3334444442223 66899999999999999875554443 223332 2222234447777988754222234456
Q ss_pred HHHHHHHHHHH
Q 011849 454 VAEKVFSVLQD 464 (476)
Q Consensus 454 IAE~VF~eLNE 464 (476)
.+..+|..|+.
T Consensus 100 g~~~if~~LQ~ 110 (113)
T PF08628_consen 100 GARRIFEMLQN 110 (113)
T ss_pred HHHHHHHHHCC
Confidence 67788887764
No 73
>COG3795 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=66.14 E-value=4.2 Score=37.36 Aligned_cols=22 Identities=41% Similarity=0.661 Sum_probs=17.6
Q ss_pred hceeeEEecCccccCCCCcchhHHHHHHHHHhh
Q 011849 294 MSSYVIEINSDYREGTGEAVSIDEAIAWAKEKF 326 (476)
Q Consensus 294 mssyvieins~~re~~~~a~~idEAIAWAKEkf 326 (476)
--=||||. .++||||.|||..=
T Consensus 79 ~Gf~vie~-----------~dLdeA~e~A~~~P 100 (123)
T COG3795 79 AGFYVIEV-----------RDLDEALEWAARCP 100 (123)
T ss_pred CcEEEEEe-----------CCHHHHHHHHhcCC
Confidence 34588887 57999999999864
No 74
>cd08815 Death_TNFRSF25_DR3 Death domain of Tumor Necrosis Factor Receptor superfamily 25. Death Domain (DD) found in Tumor Necrosis Factor (TNF) receptor superfamily 25 (TNFRSF25), also known as TRAMP (TNF receptor-related apoptosis-mediating protein), LARD, APO-3, WSL-1, or DR3 (Death Receptor-3). TNFRSF25 is primarily expressed in T cells, is activated by binding to its ligand TL1A, and plays an important role in T-cell function. DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including CARD (Caspase activation and recruitment domain), DED (Death Effector Domain), and PYRIN. They serve as adaptors in signaling pathways and can recruit other proteins into signaling complexes.
Probab=53.66 E-value=13 Score=31.80 Aligned_cols=30 Identities=13% Similarity=0.285 Sum_probs=27.1
Q ss_pred hhhhHHHHHHHHhcCCCCcHHHHHHhcCcc
Q 011849 376 ETELLDEEIRLWSAGKETNIRLLLSALHHV 405 (476)
Q Consensus 376 ~~D~Id~KI~~Wa~GKe~NIRALLSTLh~V 405 (476)
..|.+-..++.|.++...+|-.||.+|+.+
T Consensus 38 ~rda~y~ML~~W~~q~~a~~n~Ll~aL~~m 67 (77)
T cd08815 38 FRDQQYEMLKRWRQQQPAGLDAVYAALERM 67 (77)
T ss_pred hHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 779999999999988889999999999865
No 75
>COG2987 HutU Urocanate hydratase [Amino acid transport and metabolism]
Probab=49.87 E-value=37 Score=37.68 Aligned_cols=44 Identities=20% Similarity=0.271 Sum_probs=27.9
Q ss_pred eeeEEecCcc---ccC----CCCcchhHHHHHHHHHhhcccchhhhhhhhh
Q 011849 296 SYVIEINSDY---REG----TGEAVSIDEAIAWAKEKFQSQSSFTLAQQEK 339 (476)
Q Consensus 296 syvieins~~---re~----~~~a~~idEAIAWAKEkf~s~s~~~~r~~~~ 339 (476)
+-+||++..+ |-+ ..-|..+||||+||+|.--.--..|+-..||
T Consensus 193 ~i~vevd~srI~~Rl~t~y~d~~a~~ldeAl~~a~~~~~ag~p~SIgl~GN 243 (561)
T COG2987 193 CIAVEVDESRIDKRLRTGYLDEIAETLDEALALAEEATAAGEPISIGLLGN 243 (561)
T ss_pred EEEEEeCHHHHHHHHhcchhhhhcCCHHHHHHHHHHHHhcCCceEEEEecc
Confidence 4566665543 222 2347889999999999877544445554443
No 76
>KOG3192 consensus Mitochondrial J-type chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=49.09 E-value=31 Score=33.37 Aligned_cols=53 Identities=23% Similarity=0.264 Sum_probs=37.8
Q ss_pred CCCCCChhHHHHHHHHHHHhhCCCccccCCCCHHHHHHHHHHHHHHHHHHHHHhh
Q 011849 417 LTSLIESSHVKKAYQKARLCLHPDKLQQRGATAQQKYVAEKVFSVLQDAWSAFIS 471 (476)
Q Consensus 417 msdLaTp~eVKKAYRKAaLkvHPDKL~qrGa~~EQK~IAE~VF~eLNEAYE~Fkd 471 (476)
+..-+.|..++.-|----.+.|||+..... ..+...|.+--.+||+||.+|++
T Consensus 18 ~~~~~~p~~l~~~~~~~skkL~~d~~~~~~--~~~~d~a~eqSa~lnkAY~TLk~ 70 (168)
T KOG3192|consen 18 LSFKIDPDKLKEKYTDISKKLHPDRPGLSF--AGDTDQASEQSAELNKAYDTLKD 70 (168)
T ss_pred cCCCCCcchhhHHHHHHHHhhCcccccccc--cccchhHHHHHHHHHHHHHHHHh
Confidence 445567788887888888999999953211 11222566777899999999986
No 77
>PF08081 RBM1CTR: RBM1CTR (NUC064) family; InterPro: IPR012604 This region is found in RBM1-like RNA binding hnRNPs [].
Probab=35.01 E-value=17 Score=28.50 Aligned_cols=13 Identities=46% Similarity=0.884 Sum_probs=10.0
Q ss_pred ccccCCCCchhhh
Q 011849 43 SDVFGGPPRTLLA 55 (476)
Q Consensus 43 ~dvfggpprs~l~ 55 (476)
+|.||||||--.+
T Consensus 15 Rd~YggPPrRe~~ 27 (45)
T PF08081_consen 15 RDNYGGPPRREPM 27 (45)
T ss_pred cccCCCCCCCCCC
Confidence 5889999997443
No 78
>PF03656 Pam16: Pam16; InterPro: IPR005341 The Pam16 protein is the fifth essential subunit of the pre-sequence translocase-associated protein import motor (PAM) []. In Saccharomyces cerevisiae (Baker's yeast), Pam16 is required for preprotein translocation into the matrix, but not for protein insertion into the inner membrane [].; PDB: 2GUZ_J.
Probab=30.70 E-value=68 Score=29.48 Aligned_cols=31 Identities=13% Similarity=0.144 Sum_probs=23.2
Q ss_pred CcccCCCCCCChhHHHHHHHHHHHhhCCCcc
Q 011849 412 WCSVPLTSLIESSHVKKAYQKARLCLHPDKL 442 (476)
Q Consensus 412 WK~VGmsdLaTp~eVKKAYRKAaLkvHPDKL 442 (476)
-+.|+|.+.++.++|.+.|.++.-..+|+|.
T Consensus 61 ~~ILnv~~~~~~eeI~k~y~~Lf~~Nd~~kG 91 (127)
T PF03656_consen 61 RQILNVKEELSREEIQKRYKHLFKANDPSKG 91 (127)
T ss_dssp HHHHT--G--SHHHHHHHHHHHHHHT-CCCT
T ss_pred HHHcCCCCccCHHHHHHHHHHHHhccCCCcC
Confidence 3577888889999999999999999999984
No 79
>PF11363 DUF3164: Protein of unknown function (DUF3164); InterPro: IPR021505 This entry is represented by Bacteriophage B3, Orf6. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches.
Probab=30.60 E-value=49 Score=32.15 Aligned_cols=31 Identities=23% Similarity=0.479 Sum_probs=27.1
Q ss_pred hhhhhhhHHHHHHHHhcCCCCcHHHHHHhcC
Q 011849 373 DDIETELLDEEIRLWSAGKETNIRLLLSALH 403 (476)
Q Consensus 373 ~~~~~D~Id~KI~~Wa~GKe~NIRALLSTLh 403 (476)
-+..++.|++=|..|++|...+||+|+..+=
T Consensus 98 l~~Ak~lIde~l~~w~~g~~~~l~~lV~~af 128 (195)
T PF11363_consen 98 LQAAKALIDECLNEWAKGADPELRALVNRAF 128 (195)
T ss_pred HHHHHHHHHHHHHHHhcCCChHHHHHHHHHH
Confidence 4456889999999999999999999998765
No 80
>COG3483 TDO2 Tryptophan 2,3-dioxygenase (vermilion) [Amino acid transport and metabolism]
Probab=28.66 E-value=84 Score=32.09 Aligned_cols=49 Identities=20% Similarity=0.347 Sum_probs=32.8
Q ss_pred hhHHHHHHHHHHHhhC---CCccccCCCCHHHHHHHH--HHHHHHHHHHHHHhh
Q 011849 423 SSHVKKAYQKARLCLH---PDKLQQRGATAQQKYVAE--KVFSVLQDAWSAFIS 471 (476)
Q Consensus 423 p~eVKKAYRKAaLkvH---PDKL~qrGa~~EQK~IAE--~VF~eLNEAYE~Fkd 471 (476)
.-+++.-++|++|.-- =|-+.+...++.-|++|. +||.+|+.||+++..
T Consensus 34 ~Hqt~ElW~klilhEl~aA~~llr~~~~~pa~kmL~Rv~ri~eql~~aw~Vl~T 87 (262)
T COG3483 34 QHQTSELWMKLILHELRAARDLLRADDLPPALKMLARVSRIFEQLNQAWDVLAT 87 (262)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4678888888776311 122333233456788876 889999999999863
No 81
>PF02655 ATP-grasp_3: ATP-grasp domain; InterPro: IPR003806 The ATP-grasp fold is one of several distinct ATP-binding folds, and is found in enzymes that catalyze the formation of amide bonds, catalyzing the ATP-dependent ligation of a carboxylate-containing molecule to an amino or thiol group-containing molecule []. This fold is found in many different enzyme families, including various peptide synthetases, biotin carboxylase, synapsin, succinyl-CoA synthetase, pyruvate phosphate dikinase, and glutathione synthetase, amongst others []. These enzymes contribute predominantly to macromolecular synthesis, using ATP-hydrolysis to activate their substrates. The ATP-grasp fold shares functional and structural similarities with the PIPK (phosphatidylinositol phosphate kinase) and protein kinase superfamilies. The ATP-grasp domain consists of two subdomains with different alpha+beta folds, which grasp the ATP molecule between them. Each subdomain provides a variable loop that forms part of the active site, with regions from other domains also contributing to the active site, even though these other domains are not conserved between the various ATP-grasp enzymes []. This entry describes a type of ATP-grasp fold that is found in a set of proteins of unknown function.; GO: 0005524 ATP binding, 0046872 metal ion binding; PDB: 3DF7_A.
Probab=25.79 E-value=33 Score=30.95 Aligned_cols=9 Identities=67% Similarity=1.003 Sum_probs=7.8
Q ss_pred eeeEEecCc
Q 011849 296 SYVIEINSD 304 (476)
Q Consensus 296 syvieins~ 304 (476)
-||||||+-
T Consensus 149 ~~viEINPR 157 (161)
T PF02655_consen 149 PYVIEINPR 157 (161)
T ss_dssp EEEEEEESS
T ss_pred EEEEEEcCC
Confidence 699999974
No 82
>PF14267 DUF4357: Domain of unknown function (DUF4357)
Probab=22.85 E-value=18 Score=28.72 Aligned_cols=22 Identities=27% Similarity=0.339 Sum_probs=18.0
Q ss_pred eecccccccCCCCcCcCccCCC
Q 011849 247 VSVDDLELNSPSSPASSLCQEP 268 (476)
Q Consensus 247 ~s~~d~~~~~p~s~~ss~~~~p 268 (476)
+...||.++|||+|+.-+++..
T Consensus 18 ~f~~d~~F~SPS~AA~~v~G~s 39 (55)
T PF14267_consen 18 VFTQDYLFSSPSAAAAVVLGRS 39 (55)
T ss_pred EEecCeEcCChHHHHHHHcCCC
Confidence 5677999999999988777654
No 83
>cd08315 Death_TRAILR_DR4_DR5 Death domain of Tumor necrosis factor-Related Apoptosis-Inducing Ligand Receptors. Death Domain (DD) found in Tumor necrosis factor-Related Apoptosis-Inducing Ligand (TRAIL) Receptors. In mammals, this family includes TRAILR1 (also called DR4 or TNFRSF10A) and TRAILR2 (also called DR5, TNFRSF10B, or KILLER). They function as receptors for the cytokine TRAIL and are involved in apoptosis signaling pathways. TRAIL preferentially induces apoptosis in cancer cells while exhibiting little toxicity in normal cells. DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including CARD (Caspase activation and recruitment domain), DED (Death Effector Domain), and PYRIN. They serve as adaptors in signaling pathways and can recruit other proteins into signaling complexes.
Probab=22.58 E-value=78 Score=27.33 Aligned_cols=28 Identities=29% Similarity=0.529 Sum_probs=25.0
Q ss_pred hhhHHHHHHHHh--cCCCCcHHHHHHhcCc
Q 011849 377 TELLDEEIRLWS--AGKETNIRLLLSALHH 404 (476)
Q Consensus 377 ~D~Id~KI~~Wa--~GKe~NIRALLSTLh~ 404 (476)
.+.+-..+..|. .|+...+.+|+.+|..
T Consensus 47 ~eq~~qmL~~W~~~~G~~At~~~L~~aL~~ 76 (96)
T cd08315 47 REQLYQMLLTWVNKTGRKASVNTLLDALEA 76 (96)
T ss_pred HHHHHHHHHHHHHhhCCCcHHHHHHHHHHH
Confidence 788888999998 5999999999999984
No 84
>TIGR03474 incFII_RepA incFII family plasmid replication initiator RepA. Members of this protein are the plasmid replication initiator RepA of incFII (plasmid incompatibility group F-II) plasmids. R1 and R100 are plasmids in this group. Immediately upstream of repA is found tap, a leader peptide of about 24 amino acids, often not assigned as a gene in annotated plasmid sequences. Note that other, non-homologous plasmid replication proteins share the gene symbol (repA) and similar names (plasmid replication protein RepA).
Probab=20.67 E-value=57 Score=33.58 Aligned_cols=28 Identities=32% Similarity=0.449 Sum_probs=23.6
Q ss_pred ecCccccCCCCcchhHHHHHHH----HHhhcc
Q 011849 301 INSDYREGTGEAVSIDEAIAWA----KEKFQS 328 (476)
Q Consensus 301 ins~~re~~~~a~~idEAIAWA----KEkf~s 328 (476)
||..+++...+...|+||||-| +|||.+
T Consensus 168 ~Nk~l~kkGl~pltl~Eai~~aw~~~r~rf~~ 199 (275)
T TIGR03474 168 ENKQRKKQGLDTLEMDELIAKAWRFVRERFRS 199 (275)
T ss_pred HHHHHHhcCCCcccHHHHHHHHHHHHHHHHHH
Confidence 6888888888999999999754 788885
No 85
>PTZ00448 hypothetical protein; Provisional
Probab=20.28 E-value=77 Score=34.09 Aligned_cols=43 Identities=19% Similarity=0.353 Sum_probs=33.9
Q ss_pred HHHHHHhcCCCCcHHHHHHhcCcccCCCCCCcccCCCCCCChhHHHHHHH
Q 011849 382 EEIRLWSAGKETNIRLLLSALHHVLWPNSGWCSVPLTSLIESSHVKKAYQ 431 (476)
Q Consensus 382 ~KI~~Wa~GKe~NIRALLSTLh~VLWees~WK~VGmsdLaTp~eVKKAYR 431 (476)
.++..|..|++.+|--+|.+ +.=|+-++=+..+..+++++||-
T Consensus 34 nkv~~~R~G~e~dldeVLq~-------~~VF~NvsKG~~A~~edL~kaFG 76 (373)
T PTZ00448 34 NKILNWRSGVEWDLDEVLQI-------RTIFANVSKGQLANSDDLNTVFG 76 (373)
T ss_pred cHHHHHHcCCCCCHHHHhhh-------hheeecccccccCCHHHHHHHhC
Confidence 47999999999998665554 34456677888999999999974
No 86
>cd08316 Death_FAS_TNFRSF6 Death domain of FAS or TNF receptor superfamily member 6. Death Domain (DD) found in the FS7-associated cell surface antigen (FAS). FAS, also known as TNFRSF6 (TNF receptor superfamily member 6), APT1, CD95, FAS1, or APO-1, together with FADD (Fas-associating via Death Domain) and caspase 8, is an integral part of the death inducing signalling complex (DISC), which plays an important role in the induction of apoptosis and is activated by binding of the ligand FasL to FAS. FAS also plays a critical role in self-tolerance by eliminating cell types (autoreactive T and B cells) that contribute to autoimmunity. DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including CARD (Caspase activation and recruitment domain), DED (Death Effector Domain), and PYRIN. They serve as adaptors in sign
Probab=20.08 E-value=1e+02 Score=27.03 Aligned_cols=29 Identities=28% Similarity=0.437 Sum_probs=25.3
Q ss_pred hhhhHHHHHHHHh--cCCCCcHHHHHHhcCc
Q 011849 376 ETELLDEEIRLWS--AGKETNIRLLLSALHH 404 (476)
Q Consensus 376 ~~D~Id~KI~~Wa--~GKe~NIRALLSTLh~ 404 (476)
..|++-.-+..|. .|+.++.++||.+|..
T Consensus 48 ~~Eq~~qmL~~W~~~~G~~a~~~~Li~aLr~ 78 (97)
T cd08316 48 TAEQKVQLLRAWYQSHGKTGAYRTLIKTLRK 78 (97)
T ss_pred hHHHHHHHHHHHHHHhCCCchHHHHHHHHHH
Confidence 5778888899998 5899999999999983
Done!