Query 011850
Match_columns 476
No_of_seqs 212 out of 529
Neff 5.4
Searched_HMMs 29240
Date Mon Mar 25 16:36:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011850.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/011850hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2zws_A Neutral ceramidase; pri 100.0 9.6E-97 3E-101 808.0 36.2 377 1-476 23-406 (646)
2 1xn9_A 30S ribosomal protein S 43.2 23 0.00079 29.8 4.1 32 47-80 31-62 (101)
3 2v94_A RPS24, 30S ribosomal pr 41.3 25 0.00085 29.9 4.0 33 46-80 39-71 (107)
4 1ywx_A 30S ribosomal protein S 39.5 29 0.001 29.2 4.2 32 47-80 31-62 (102)
5 1u9d_A Hypothetical protein VC 38.9 1.4E+02 0.0046 25.8 8.5 78 47-130 32-112 (122)
6 2xcz_A Possible ATLS1-like lig 35.1 1.7E+02 0.0057 23.8 8.3 85 44-131 16-103 (115)
7 1uiz_A MIF, macrophage migrati 33.8 52 0.0018 27.0 4.9 50 23-75 48-102 (115)
8 1hfo_A Migration inhibitory fa 32.8 56 0.0019 26.6 4.9 51 22-75 46-101 (113)
9 2g1d_A 30S ribosomal protein S 32.6 23 0.00079 29.6 2.4 32 47-80 32-63 (98)
10 4eyb_A Beta-lactamase NDM-1; m 32.1 81 0.0028 29.6 6.5 49 20-77 75-123 (270)
11 2xzm_P RPS24E; ribosome, trans 29.9 46 0.0016 29.9 4.0 32 47-80 34-65 (149)
12 3u5c_Y RP50, 40S ribosomal pro 28.9 33 0.0011 30.4 2.9 32 47-80 36-67 (135)
13 3djh_A Macrophage migration in 26.5 73 0.0025 26.3 4.6 49 22-73 46-99 (114)
14 2wkb_A Macrophage migration in 26.2 61 0.0021 27.1 4.1 44 30-75 54-102 (125)
15 2zo4_A Metallo-beta-lactamase 25.1 1.6E+02 0.0055 27.7 7.4 52 19-77 21-73 (317)
16 3fwu_A Macrophage migration in 25.1 51 0.0018 28.4 3.4 44 30-75 75-123 (133)
17 2fhx_A SPM-1; metallo-beta-lac 24.3 1.6E+02 0.0056 26.4 7.0 51 19-77 29-79 (246)
18 2y8b_A Metallo-B-lactamase; hy 23.3 1.5E+02 0.0051 27.6 6.6 51 18-77 66-116 (265)
19 3l6n_A Metallo-beta-lactamase; 21.3 1.1E+02 0.0037 27.1 5.0 53 18-79 29-81 (219)
20 1vra_A Arginine biosynthesis b 21.2 1.5E+02 0.005 28.0 5.9 46 19-74 89-136 (208)
21 1axh_A Atracotoxin-HVI, ACTX-H 21.1 41 0.0014 23.1 1.5 19 302-320 2-20 (37)
22 3aj3_A MLR6805 protein, 4-pyri 20.6 1.1E+02 0.0037 28.2 5.0 56 15-77 30-99 (274)
23 2os5_A Acemif; macrophage migr 20.5 1.2E+02 0.0039 25.1 4.6 39 31-71 55-98 (119)
24 1n62_B Carbon monoxide dehydro 20.2 1.6E+02 0.0054 32.9 7.0 106 20-130 507-613 (809)
25 3b64_A Macrophage migration in 20.1 3.4E+02 0.012 21.8 7.5 85 44-131 15-103 (112)
26 2dhm_A Protein BOLA; stationar 20.0 1.1E+02 0.0039 25.7 4.4 37 47-86 10-46 (107)
No 1
>2zws_A Neutral ceramidase; prism fold and beta-sandwich fold, hydrolase, lipid metaboli secreted; HET: PLM; 1.40A {Pseudomonas aeruginosa} PDB: 2zxc_A*
Probab=100.00 E-value=9.6e-97 Score=808.02 Aligned_cols=377 Identities=42% Similarity=0.736 Sum_probs=345.9
Q ss_pred CCccCCCCCccceeecceEEEEEEEEeC-CCCEEEEEEeccCcccHHHHHHHHHHHHHHhCCCCCCCcEEEEeeccCCCC
Q 011850 1 MMGYANMEQIASGIHFRLRARTFIVAEP-QGNRVVFVNLDACMASQIVKIKVIERLKARYGDLYTEKNVAISGIHTHAGP 79 (476)
Q Consensus 1 M~GYa~~~q~a~GihdrL~ARA~Vl~d~-~~~rvv~Vs~Dl~~i~~~v~~~V~~~L~~~~G~~i~~~nVlIsATHTHSgP 79 (476)
||||+.+.|+++|||||||||||||+++ +++|+|||++|++++++.++++|+++|+++||++|+++||+||+|||||||
T Consensus 23 m~GYa~~~q~a~Gihd~L~aRA~vl~d~~~~~rvv~Vs~D~~~~~~~v~~~V~~~L~~~~g~~~~~~nV~isaTHTHSgP 102 (646)
T 2zws_A 23 MMGYSSLEQKTAGIHMRQWARAFVIEEAASGRRLVYVNTDLGMIFQAVHLKVLARLKAKYPGVYDENNVMLAATHTHSGP 102 (646)
T ss_dssp EESSCCTTCEEEEESSCCEEEEEEEEESSSCCEEEEEEESSSCCCHHHHHHHHHHHHHHSTTTCCTTTEEEEECCBSBEE
T ss_pred ecCccccCccccceecceEEEEEEEEcCCCCCEEEEEEECcccCCHHHHHHHHHHHHHHhCCCCChhHEEEEeeeeCCCC
Confidence 8999999999999999999999999984 379999999999999999999999999999999999999999999999999
Q ss_pred CCCccchhhhccccccchhHHHHHHHHHHHHHHHHHhcCCceEEEEEEEEeccccccCChhhhcCCChhhcCcCCCCCCC
Q 011850 80 GGYLQYVVYIVTSLGFVRQSFDALVDGIEKSVLQAHENLRPGSIFVNKGELLDASISRSPSAYLNNPASERGKYKYNVDK 159 (476)
Q Consensus 80 gG~~~~~l~~it~~Gf~~~y~~~lvdgIv~AI~~A~~nl~Pa~l~~g~g~~~~~~~NRs~~ay~~NP~~er~~y~g~vD~ 159 (476)
++|+++.+|++++.||+++|+++|+++|++||++||++|+|++|.++++++.++++|||+.+|++|| ||++|++++||
T Consensus 103 ~g~~~~~l~~~~~~g~~~~y~~~lv~~iv~AI~~A~~~l~pa~l~~g~g~~~~~~~NRs~~ay~~NP--er~~~~g~vD~ 180 (646)
T 2zws_A 103 GGFSHYAMYNLSVLGFQEKTFNAIVDGIVRSIERAQARLQPGRLFYGSGELRNASRNRSLLSHLKNP--DIAGYEDGIDP 180 (646)
T ss_dssp CCCCSSHHHHGGGTBCCHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSSEEESCHHHHTTCS--CCTTCTTSCCC
T ss_pred cccccccccccccccccHHHHHHHHHHHHHHHHHHHhcCCcEEEEEEEEEeCcceecCChhhhhcCc--cccccCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999 89999999999
Q ss_pred eeEEEEEEeCCCCcEEEEEeeeecccccCCCCccccCChHHHHHHHHHHHhcccCCCCCCcccccccCCCcccccccccc
Q 011850 160 EMTLLKFVDDQWGPVGSFNWFATHGTSMSRTNSLISGDNKGAAARFMEDWFEQSNAGHSSADELVSEGIPRRVSDIISDF 239 (476)
Q Consensus 160 ~m~vLkf~~~dG~~ig~L~nfA~HpTsl~~~N~lIS~D~~G~As~~lE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (476)
+|+||+|++.+|+++|+|+|||||||+|+++|++||+||+|+++++||+.+++
T Consensus 181 ~~~vL~f~~~dg~~ig~l~~fA~HpTsl~~~N~liS~D~~G~a~~~lE~~~~~--------------------------- 233 (646)
T 2zws_A 181 QMSVLSFVDANGELAGAISWFPVHSTSMTNANHLISPDNKGYASYHWEHDVSR--------------------------- 233 (646)
T ss_dssp EEEEEEEEETTCCEEEEEEECCCCBCSSCTTCCEEBCHHHHHHHHHHHHTTCC---------------------------
T ss_pred ceEEEEEEeCCCCEEEEEEEEccCceecCCCCCeecCccHHHHHHHHHHHhCC---------------------------
Confidence 99999999999999999999999999999999999999999999999998654
Q ss_pred ccchhHHHHHhhccCCCCCCchhhhhhHhhhhcccccccCCCCeEEEeecCCCCCCCCCCCCCcccCCCCCCCCCCCcCC
Q 011850 240 RNNHHELLELAASFQSPPGKAATKILSVARRVRGILREAEKPGFVSAFCQSNCGDVSPNVLGAFCIDSGLPCDFNHSTCG 319 (476)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fVaaF~qsn~GDvsPN~~g~~c~d~g~~c~~~~s~c~ 319 (476)
.++|||+|+|+|+||||||+.
T Consensus 234 ----------------------------------------~~~fva~F~qg~~GDvsP~~~------------------- 254 (646)
T 2zws_A 234 ----------------------------------------KSGFVAAFAQTNAGNLSPNLN------------------- 254 (646)
T ss_dssp ----------------------------------------STTCEEEEECSSCTTEEECCC-------------------
T ss_pred ----------------------------------------CCCeEEEEeccCcccCCcccc-------------------
Confidence 357999999999999999986
Q ss_pred CCCcccccCCCCCCCcchhHHHHHHHHHHHHHHHHhhcCCccccceeEEEEeEecceeEEecCCCCCCCCcccCCccccc
Q 011850 320 GKNEMCYGRGPGYPDEFESTRIIGERQFRKAVDLFNKASEKLEGKIDYRHSYLDFSQLEVTIPKQNGGSETVKTCPAAMG 399 (476)
Q Consensus 320 g~~~~c~~~gP~~~d~~est~iig~~q~~~A~~l~~~~~~~l~g~v~~~~~~vdm~~~~v~~~~~~~~~~~~~tc~~a~G 399 (476)
.|+++||+ .+++|++++||++|+++|+++|+++.++|+|+|+++|+||||++++|..+++ ++...+||++|||
T Consensus 255 ----~~~~~Gp~-~~~~e~~~~iG~~~~~~a~~~l~~~~~~l~g~v~~~~~~vdm~~~~v~~~~~--~g~~~~tc~~a~g 327 (646)
T 2zws_A 255 ----LKPGSGPF-DNEFDNTREIGLRQFAKAYEIAGQAQEEVLGELDSRFRFVDFTRLPIRPEFT--DGQPRQLCTAAIG 327 (646)
T ss_dssp ----CCTTCCTT-SCHHHHHHHHHHHHHHHHHHHHHHCCEEECSCEEEEEEEEECTTCEECGGGS--SSSCEECCCCCEE
T ss_pred ----ccccCCCC-cccHHHHHHHHHHHHHHHHHHHhhccccccCCcceEEEEecCcceeeecccC--Ccccceechhhhc
Confidence 37789999 5999999999999999999999988899999999999999999999987654 4578999999999
Q ss_pred ccccccC-CCCCCCcCccCCCCCCCchHHhhhhccCCC-CHhhhhccCCCcceecCCCCCCCCccccccccc----cccc
Q 011850 400 FAFAAGT-TDGPGAFDFTQGDDKGNPFWRLVRDLLKKP-DKEQINCQYPKPILLDTGEMKQPYDWASLRQWL----GGDF 473 (476)
Q Consensus 400 ~sfaaGt-~DGpg~~~f~qg~~~~~p~w~~~~~~~~~p-~~~~~~cq~pKpill~~G~~~~p~~w~p~~~~~----~~~~ 473 (476)
++|+||| +||||.|+|+|| + ||||+.+++++.+| ++|+++||+||||||++|+ +.||+|+|.++++ +|++
T Consensus 328 ~s~aag~~~dgpg~~~f~q~-~--~~~w~~~~~~l~~~~~~~~~~cq~~k~ill~~g~-~~p~~~~~~~v~vqilriGdl 403 (646)
T 2zws_A 328 TSLAAGSTEDGPGPLGLEEG-N--NPFLSALGGLLTGVPPQELVQCQAEKTILADTGN-KKPYPWTPTVLPIQMFRIGQL 403 (646)
T ss_dssp C---------------CCSS-C--CHHHHHTTCSCCCCCCHHHHHHTTTCCEEECCTT-CSSSCSSCSEEEEEEEEETTE
T ss_pred hhhhcCCcccCCCccccccc-c--chhhhhhhhhhccccchhHHhhccCcceecccCC-CCCcccccceEEEEEEEECCE
Confidence 9999999 999999999999 4 99999999999998 7999999999999999999 8999999999999 9998
Q ss_pred ccC
Q 011850 474 VML 476 (476)
Q Consensus 474 ~~~ 476 (476)
+|+
T Consensus 404 ~iv 406 (646)
T 2zws_A 404 ELL 406 (646)
T ss_dssp EEE
T ss_pred EEE
Confidence 764
No 2
>1xn9_A 30S ribosomal protein S24E; beta+alpha, GFT structural genomics, protein structure initiative, PSI, NESG, MAR11; NMR {Methanosarcina mazei} SCOP: d.12.1.3
Probab=43.16 E-value=23 Score=29.77 Aligned_cols=32 Identities=22% Similarity=0.164 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEeeccCCCCC
Q 011850 47 VKIKVIERLKARYGDLYTEKNVAISGIHTHAGPG 80 (476)
Q Consensus 47 v~~~V~~~L~~~~G~~i~~~nVlIsATHTHSgPg 80 (476)
-+.+|+++|++.|+ .+.+.|+|-.-.||-|=+
T Consensus 31 sk~eirekLAk~~~--~~~~~Vvv~~~~t~fG~g 62 (101)
T 1xn9_A 31 SRNDVRNKLAAMLN--APLELLVIQRIKTEYGMQ 62 (101)
T ss_dssp CHHHHHHHHHHHTT--CCTTTEEEEEEEECSSSS
T ss_pred CHHHHHHHHHHHHC--CCCCEEEEEeeEecCCCc
Confidence 36999999999999 899999999999999886
No 3
>2v94_A RPS24, 30S ribosomal protein S24E; ribonucleoprotein; 1.90A {Pyrococcus abyssi} SCOP: d.12.1.3
Probab=41.26 E-value=25 Score=29.91 Aligned_cols=33 Identities=18% Similarity=0.107 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcEEEEeeccCCCCC
Q 011850 46 IVKIKVIERLKARYGDLYTEKNVAISGIHTHAGPG 80 (476)
Q Consensus 46 ~v~~~V~~~L~~~~G~~i~~~nVlIsATHTHSgPg 80 (476)
.-+.+|+++|++.|+ .+.+.|+|-.-.||-|=+
T Consensus 39 psk~eirekLA~~~~--~~~d~Vvv~~~~T~fG~g 71 (107)
T 2v94_A 39 PSRKDVKGKLVAMLD--LNPETTVIQYIRSYFGSY 71 (107)
T ss_dssp CCHHHHHHHHHHHHT--CCGGGEEEEEEECCTTCS
T ss_pred CCHHHHHHHHHHHHC--CCCCEEEEEeeEecCCCc
Confidence 347999999999999 899999999999999886
No 4
>1ywx_A 30S ribosomal protein S24E; GFT MRR16, nesgc, structural genomics, PSI, protein structure initiative; NMR {Methanococcus maripaludis} SCOP: d.12.1.3
Probab=39.46 E-value=29 Score=29.21 Aligned_cols=32 Identities=13% Similarity=0.043 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEeeccCCCCC
Q 011850 47 VKIKVIERLKARYGDLYTEKNVAISGIHTHAGPG 80 (476)
Q Consensus 47 v~~~V~~~L~~~~G~~i~~~nVlIsATHTHSgPg 80 (476)
-+.+|+++|++.|+ .+++.|+|-.-.||-|=+
T Consensus 31 sk~eirekLAk~~~--~~~d~Vvv~~~~T~fG~g 62 (102)
T 1ywx_A 31 SIKDVKMKLVAVLN--ANKQVLVVDTLDQIFGKL 62 (102)
T ss_dssp CHHHHHHHHHHHHT--SCSTTEEEEEEEECSSSS
T ss_pred CHHHHHHHHHHHHC--CCCCEEEEEccEecCCCc
Confidence 36999999999999 899999999999999886
No 5
>1u9d_A Hypothetical protein VC0714; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics; 1.70A {Vibrio cholerae o1 biovar eltor str} SCOP: d.80.1.5
Probab=38.91 E-value=1.4e+02 Score=25.81 Aligned_cols=78 Identities=13% Similarity=0.059 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEe---eccCCCCCCCccchhhhccccccchhHHHHHHHHHHHHHHHHHhcCCceEE
Q 011850 47 VKIKVIERLKARYGDLYTEKNVAISG---IHTHAGPGGYLQYVVYIVTSLGFVRQSFDALVDGIEKSVLQAHENLRPGSI 123 (476)
Q Consensus 47 v~~~V~~~L~~~~G~~i~~~nVlIsA---THTHSgPgG~~~~~l~~it~~Gf~~~y~~~lvdgIv~AI~~A~~nl~Pa~l 123 (476)
+...+.+.|++.++ .+.+++-|-- +.-|.| . .+....+.-.|-.++-.+.++..|.+++.++....+-+.+
T Consensus 32 lS~~Lid~La~i~~--~~~e~fTle~i~s~~i~~G-~---~MP~VeV~~fgRt~EqK~~la~~IT~av~~~~~~~e~V~V 105 (122)
T 1u9d_A 32 LVPTLLNELSSLLS--TARNAFTFELINTQYFAEG-G---VYPMVEVLWFGREQQTQDQIAQVITDQIRQLLGADSHLAV 105 (122)
T ss_dssp HHHHHHHHHHHHHT--CCGGGCEEEECCCCCCCTT-C---CCCEEEEEESCCCHHHHHHHHHHHHHHHHHHHCTTCCCEE
T ss_pred HhHHHHHHHHHHHC--CCcccEEEEEeeeEEEecC-C---CCCEEEEEEcCCCHHHHHHHHHHHHHHHHHhCCCCceEEE
Confidence 45556677778888 8999986654 445556 2 2223333333557788899999999999999544445666
Q ss_pred EEEEEEe
Q 011850 124 FVNKGEL 130 (476)
Q Consensus 124 ~~g~g~~ 130 (476)
-+..-.-
T Consensus 106 if~el~~ 112 (122)
T 1u9d_A 106 VFIPLQR 112 (122)
T ss_dssp EEEECCG
T ss_pred EEEecCH
Confidence 6554433
No 6
>2xcz_A Possible ATLS1-like light-inducible protein; cytokine, tautomerase, immune system, cyanobacterium; 1.64A {Prochlorococcus marinus}
Probab=35.12 E-value=1.7e+02 Score=23.76 Aligned_cols=85 Identities=13% Similarity=0.073 Sum_probs=55.2
Q ss_pred cHHHHHHHHHHHHHHhCCCCCCCcEEEEeeccCC-CCCCCccc-hhhhcccc-ccchhHHHHHHHHHHHHHHHHHhcCCc
Q 011850 44 SQIVKIKVIERLKARYGDLYTEKNVAISGIHTHA-GPGGYLQY-VVYIVTSL-GFVRQSFDALVDGIEKSVLQAHENLRP 120 (476)
Q Consensus 44 ~~~v~~~V~~~L~~~~G~~i~~~nVlIsATHTHS-gPgG~~~~-~l~~it~~-Gf~~~y~~~lvdgIv~AI~~A~~nl~P 120 (476)
...+.+++-+.|++.+| .|++.+++.-..... .++|-... .+-++... |..++--+.+...|.+++.+.. ...|
T Consensus 16 ~~~l~~~~~~~l~~~lg--kp~~~~~v~~~~~~~~~~~g~~~~~~~v~i~~~~g~t~eqk~~l~~~i~~~l~~~l-gi~~ 92 (115)
T 2xcz_A 16 ANSLLQELSSKLAELLG--KPEKYVMTSLQCGVPMTFSGNTEPTCYVEVKSIGALDGSRTQEVSELVCGHIEQNL-GIPA 92 (115)
T ss_dssp HHHHHHHHHHHHHHHHT--CCGGGCEEEEECSCCCCBTTBCSSCEEEEEEESSCCCTTHHHHHHHHHHHHHHHHH-CCCG
T ss_pred HHHHHHHHHHHHHHHHC--CChHHEEEEEECCCceEECCCCCcEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHh-CcCc
Confidence 45678888888899999 999988887543221 33332221 22234333 4667777888888888888765 6677
Q ss_pred eEEEEEEEEec
Q 011850 121 GSIFVNKGELL 131 (476)
Q Consensus 121 a~l~~g~g~~~ 131 (476)
-++.+.--+..
T Consensus 93 ~~v~I~~~e~~ 103 (115)
T 2xcz_A 93 DRIYIGFEDVP 103 (115)
T ss_dssp GGEEEEEEECC
T ss_pred ccEEEEEEECC
Confidence 66666655554
No 7
>1uiz_A MIF, macrophage migration inhibitory factor; cytokine, tautomerase; 2.50A {Xenopus laevis} SCOP: d.80.1.3
Probab=33.82 E-value=52 Score=26.98 Aligned_cols=50 Identities=8% Similarity=0.004 Sum_probs=36.1
Q ss_pred EEEEeCCCCEEEEEEeccCc-ccHH----HHHHHHHHHHHHhCCCCCCCcEEEEeecc
Q 011850 23 FIVAEPQGNRVVFVNLDACM-ASQI----VKIKVIERLKARYGDLYTEKNVAISGIHT 75 (476)
Q Consensus 23 ~Vl~d~~~~rvv~Vs~Dl~~-i~~~----v~~~V~~~L~~~~G~~i~~~nVlIsATHT 75 (476)
+++.. .....++|.+.+.. ...+ +..++-+.|++.+| ++.++|.|.-+-.
T Consensus 48 ~~~~g-~~~~~~~v~i~~~~g~~~eqk~~l~~~i~~~l~~~lg--i~~~~v~I~~~e~ 102 (115)
T 1uiz_A 48 MSFGD-STDPCAVCSLCSIGKIGGPQNKSYTKLLCDILTKQLN--IPANRVYINYYDL 102 (115)
T ss_dssp EEETT-BCSSCEEEEEEESSCCSHHHHHHHHHHHHHHHHHHHC--CCGGGEEEEEEEC
T ss_pred eEECC-CCCCeEEEEEEEecCCCHHHHHHHHHHHHHHHHHHhC--cCcceEEEEEEEC
Confidence 44443 35678899998775 5555 56666777788899 9999999976543
No 8
>1hfo_A Migration inhibitory factor; tautomerase; 1.65A {Trichinella spiralis} SCOP: d.80.1.3
Probab=32.78 E-value=56 Score=26.64 Aligned_cols=51 Identities=14% Similarity=0.167 Sum_probs=36.5
Q ss_pred EEEEEeCCCCEEEEEEeccCc-ccHH----HHHHHHHHHHHHhCCCCCCCcEEEEeecc
Q 011850 22 TFIVAEPQGNRVVFVNLDACM-ASQI----VKIKVIERLKARYGDLYTEKNVAISGIHT 75 (476)
Q Consensus 22 A~Vl~d~~~~rvv~Vs~Dl~~-i~~~----v~~~V~~~L~~~~G~~i~~~nVlIsATHT 75 (476)
.+++.. .....++|.+.+.. ...+ +..++-+.|++.+| ++.++|+|.-+-.
T Consensus 46 ~~~~~g-~~~~~~~i~i~~~~g~~~eqk~~l~~~i~~~l~~~lg--i~~~~v~I~~~e~ 101 (113)
T 1hfo_A 46 QLSFGG-STNPAAFGTLMSIGGIEPSRNRDHSAKLFDHLNTKLG--IPKNRMYIHFVNL 101 (113)
T ss_dssp EEEETT-BCSSCEEEEEEESSSCSHHHHHHHHHHHHHHHHHHHC--CCGGGEEEEEEEC
T ss_pred cEEecC-CCCCeEEEEEEEecCCCHHHHHHHHHHHHHHHHHHhC--cCcCeEEEEEEEC
Confidence 344544 35678899888765 5555 56667777788899 9999999976543
No 9
>2g1d_A 30S ribosomal protein S24E; complete proteome, ribosome; NMR {Thermoplasma acidophilum} SCOP: d.12.1.3
Probab=32.63 E-value=23 Score=29.62 Aligned_cols=32 Identities=13% Similarity=0.159 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEeeccCCCCC
Q 011850 47 VKIKVIERLKARYGDLYTEKNVAISGIHTHAGPG 80 (476)
Q Consensus 47 v~~~V~~~L~~~~G~~i~~~nVlIsATHTHSgPg 80 (476)
-+.+|+++|++.|+ .+.+.|+|-.-.||-|=+
T Consensus 32 sk~eirekLA~~~~--~~~~~vvv~~~~t~fG~g 63 (98)
T 2g1d_A 32 SREEIKELIAKHEG--VDKELVIVDNNKQLTGKH 63 (98)
T ss_dssp CHHHHHHHHHHHHH--SCSTTEECCCCCCCSSSS
T ss_pred CHHHHHHHHHHHHC--CCCCEEEEEeeEecCCCc
Confidence 47999999999999 899999999999999886
No 10
>4eyb_A Beta-lactamase NDM-1; metallo beta lactamase, antibiotic, hydrolase-antibiotic COM; HET: 0WO; 1.16A {Klebsiella pneumoniae} PDB: 4ey2_A* 4eyf_A* 4exy_A 4exs_B 4eyl_A* 3spu_A 3q6x_A* 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A
Probab=32.05 E-value=81 Score=29.58 Aligned_cols=49 Identities=18% Similarity=0.312 Sum_probs=33.1
Q ss_pred EEEEEEEeCCCCEEEEEEeccCcccHHHHHHHHHHHHHHhCCCCCCCcEEEEeeccCC
Q 011850 20 ARTFIVAEPQGNRVVFVNLDACMASQIVKIKVIERLKARYGDLYTEKNVAISGIHTHA 77 (476)
Q Consensus 20 ARA~Vl~d~~~~rvv~Vs~Dl~~i~~~v~~~V~~~L~~~~G~~i~~~nVlIsATHTHS 77 (476)
+-+++|.+ ++.+ |.+|... .....+++++.|++..+ .+...|+ .||.|.
T Consensus 75 ~N~ylv~~--~~~~--ilIDtg~-~~~~~~~l~~~i~~~~~--~~I~~Ii--~TH~H~ 123 (270)
T 4eyb_A 75 SNGLIVRD--GGRV--LVVDTAW-TDDQTAQILNWIKQEIN--LPVALAV--VTHAHQ 123 (270)
T ss_dssp EEEEEEEE--TTEE--EEESCCS-SHHHHHHHHHHHHHHTC--CCEEEEE--ECSSSH
T ss_pred eEEEEEEE--CCEE--EEEeCCC-CHHHHHHHHHHHHHhcC--CceEEEE--eCCCCh
Confidence 45777776 3443 4468764 56667788888888777 6655555 578885
No 11
>2xzm_P RPS24E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_P
Probab=29.92 E-value=46 Score=29.93 Aligned_cols=32 Identities=31% Similarity=0.434 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEeeccCCCCC
Q 011850 47 VKIKVIERLKARYGDLYTEKNVAISGIHTHAGPG 80 (476)
Q Consensus 47 v~~~V~~~L~~~~G~~i~~~nVlIsATHTHSgPg 80 (476)
-+.+|+++|++.|+ .+++.|+|-.-.||-|-+
T Consensus 34 Sk~eIrekLAkmy~--~~~d~VvV~g~rT~fGgg 65 (149)
T 2xzm_P 34 SKEKIREELAKQLK--VDARNVVVYGFSTQYGGG 65 (149)
T ss_dssp CHHHHHHHHHHHHT--CCGGGEEEEEECCCSSSS
T ss_pred CHHHHHHHHHHHHC--CCCCEEEEEeeEecCCCc
Confidence 36899999999999 899999999999999886
No 12
>3u5c_Y RP50, 40S ribosomal protein S24-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_U* 3j16_D 3u5g_Y
Probab=28.90 E-value=33 Score=30.37 Aligned_cols=32 Identities=28% Similarity=0.404 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEeeccCCCCC
Q 011850 47 VKIKVIERLKARYGDLYTEKNVAISGIHTHAGPG 80 (476)
Q Consensus 47 v~~~V~~~L~~~~G~~i~~~nVlIsATHTHSgPg 80 (476)
-+.+|+++|++.|+ .+++.|+|-.-.||-|-+
T Consensus 36 sr~eIrekLAk~y~--~~~d~VvV~g~rT~fG~g 67 (135)
T 3u5c_Y 36 SKDELREKLAEVYK--AEKDAVSVFGFRTQFGGG 67 (135)
T ss_dssp CHHHHHHHHHTTTT--SCGGGEEEEEEEECTTSS
T ss_pred CHHHHHHHHHHHHC--CCCCEEEEEeeEeccCCc
Confidence 37999999999999 899999999999999986
No 13
>3djh_A Macrophage migration inhibitory factor; homotrimer, cytokine, inflammatory response, isomerase, phosphoprotein; 1.25A {Homo sapiens} SCOP: d.80.1.3 PDB: 1ca7_A* 1ljt_A* 2ooh_A* 2ooz_A* 3b9s_A* 2oow_A* 3ce4_A 3dji_A* 3ijg_A* 3ijj_A* 3smb_A* 3smc_A* 3u18_A* 4f2k_A* 1gd0_A* 1gcz_A* 3jsf_A* 3jsg_A* 3jtu_A* 3l5p_A* ...
Probab=26.46 E-value=73 Score=26.27 Aligned_cols=49 Identities=10% Similarity=0.025 Sum_probs=36.2
Q ss_pred EEEEEeCCCCEEEEEEeccCcc-cH----HHHHHHHHHHHHHhCCCCCCCcEEEEee
Q 011850 22 TFIVAEPQGNRVVFVNLDACMA-SQ----IVKIKVIERLKARYGDLYTEKNVAISGI 73 (476)
Q Consensus 22 A~Vl~d~~~~rvv~Vs~Dl~~i-~~----~v~~~V~~~L~~~~G~~i~~~nVlIsAT 73 (476)
.|.+.. .....+++.+-.++. .. .+..++-+.|++++| ++.++|.|.-.
T Consensus 46 ~m~fgG-s~~P~a~~~v~sig~~~~~~n~~~s~~i~~~l~~~Lg--i~~~riyI~f~ 99 (114)
T 3djh_A 46 LMAFGG-SSEPCALCSLHSIGKIGGAQNRSYSKLLCGLLAERLR--ISPDRVYINYY 99 (114)
T ss_dssp EEEETT-BCSSCEEEEEEESSCCSHHHHHHHHHHHHHHHHHHHC--CCGGGEEEEEE
T ss_pred eEEEcC-cCCCEEEEEEEEccCCCHHHHHHHHHHHHHHHHHHhC--cCcceEEEEEE
Confidence 355543 357889999987764 43 456777788889999 99999999753
No 14
>2wkb_A Macrophage migration inhibitory factor; cytokine; HET: CME; 1.78A {Plasmodium berghei} PDB: 3gad_A 3gac_A 2wkf_A*
Probab=26.19 E-value=61 Score=27.15 Aligned_cols=44 Identities=16% Similarity=0.160 Sum_probs=32.1
Q ss_pred CCEEEEEEeccCc-ccH----HHHHHHHHHHHHHhCCCCCCCcEEEEeecc
Q 011850 30 GNRVVFVNLDACM-ASQ----IVKIKVIERLKARYGDLYTEKNVAISGIHT 75 (476)
Q Consensus 30 ~~rvv~Vs~Dl~~-i~~----~v~~~V~~~L~~~~G~~i~~~nVlIsATHT 75 (476)
....++|.+.+.. .+. .+..+|-+.|.+.+| ++.++|+|.-+-.
T Consensus 54 ~dp~~~v~I~~~~g~t~eqk~~l~~~i~~~l~~~lg--i~~~~v~I~~~e~ 102 (125)
T 2wkb_A 54 NEGYCFVRLTSIGGINRSNNSLLADKITKILSNHLS--VKPRRVYIEFRDC 102 (125)
T ss_dssp CSSCEEEEEECC-----CTHHHHHHHHHHHHHHHHC--CCGGGEEEEEEC-
T ss_pred CCCcEEEEEEECCCCCHHHHHHHHHHHHHHHHHHhC--cCcceEEEEEEEC
Confidence 4678899888765 333 467778888888999 9999999987544
No 15
>2zo4_A Metallo-beta-lactamase family protein; hydrolase; 2.10A {Thermus thermophilus}
Probab=25.13 E-value=1.6e+02 Score=27.67 Aligned_cols=52 Identities=13% Similarity=0.235 Sum_probs=34.7
Q ss_pred EEEEEEEEeCCCCEEEEEEeccCcccHHHHHHHHHHHHHHhCCCCCCCcE-EEEeeccCC
Q 011850 19 RARTFIVAEPQGNRVVFVNLDACMASQIVKIKVIERLKARYGDLYTEKNV-AISGIHTHA 77 (476)
Q Consensus 19 ~ARA~Vl~d~~~~rvv~Vs~Dl~~i~~~v~~~V~~~L~~~~G~~i~~~nV-lIsATHTHS 77 (476)
.+-+++|+. +.. .+.+|.+.-.......+.+.|++ .| ++...| .|--||.|.
T Consensus 21 ~~n~~li~~--~~~--~ilID~G~~~~~~~~~l~~~l~~-~g--~~~~~i~~Vi~TH~H~ 73 (317)
T 2zo4_A 21 TVNLYLLQG--AGE--VALVDTALGTRAARGALELHLAE-LG--LCFQDVKTILLTHHHP 73 (317)
T ss_dssp EEEEEEEEE--TTE--EEEECCCCSSHHHHHHHHHHHHH-TT--CCGGGCCEEEESCCSH
T ss_pred cEEEEEEEc--CCc--eEEEECCCCCHHHHHHHHHHHHH-cC--CChhhcCEEEEcCCCC
Confidence 567888876 233 35689988776666677777766 67 654443 455588875
No 16
>3fwu_A Macrophage migration inhibitory factor-like protein; homotrimer, tautomerase, cytokine; 1.80A {Leishmania major}
Probab=25.05 E-value=51 Score=28.38 Aligned_cols=44 Identities=14% Similarity=0.126 Sum_probs=36.0
Q ss_pred CCEEEEEEeccCccc-----HHHHHHHHHHHHHHhCCCCCCCcEEEEeecc
Q 011850 30 GNRVVFVNLDACMAS-----QIVKIKVIERLKARYGDLYTEKNVAISGIHT 75 (476)
Q Consensus 30 ~~rvv~Vs~Dl~~i~-----~~v~~~V~~~L~~~~G~~i~~~nVlIsATHT 75 (476)
....++|.+-.++.- ..+..++-+.|++++| |+.++|+|.-+=.
T Consensus 75 ~dP~a~v~i~sig~~~~e~n~~~s~~i~~~l~~~Lg--I~~~riyI~f~d~ 123 (133)
T 3fwu_A 75 TDPVACVRVEALGGYGPSEPEKVTSIVTAAITKECG--IVADRIFVLYFSP 123 (133)
T ss_dssp CSSCEEEEEECTTCCCTTHHHHHHHHHHHHHHHHHC--CCGGGEEEEEECC
T ss_pred CCCEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHhC--cChhhEEEEEEEH
Confidence 467899999876542 3677888888999999 9999999987766
No 17
>2fhx_A SPM-1; metallo-beta-lactamase, dinuclear zinc, antibiotic resistanc hydrolase, metal binding protein; 1.90A {Pseudomonas aeruginosa}
Probab=24.32 E-value=1.6e+02 Score=26.40 Aligned_cols=51 Identities=12% Similarity=0.165 Sum_probs=31.8
Q ss_pred EEEEEEEEeCCCCEEEEEEeccCcccHHHHHHHHHHHHHHhCCCCCCCcEEEEeeccCC
Q 011850 19 RARTFIVAEPQGNRVVFVNLDACMASQIVKIKVIERLKARYGDLYTEKNVAISGIHTHA 77 (476)
Q Consensus 19 ~ARA~Vl~d~~~~rvv~Vs~Dl~~i~~~v~~~V~~~L~~~~G~~i~~~nVlIsATHTHS 77 (476)
...+++|.. ++.+. +-+|.+. .....+.+.+.|++.++ ...+.|--||.|.
T Consensus 29 ~~n~~li~~-~~~~~--iLiD~G~-~~~~~~~l~~~l~~~~~----~~~~~vi~TH~H~ 79 (246)
T 2fhx_A 29 SSNVLVAKM-LDGTV--VIVSSPF-ENLGTQTLMDWVAKTMK----PKKVVAINTHFHL 79 (246)
T ss_dssp TEEEEEEEC-TTSEE--EEESCCS-SHHHHHHHHHHHHHHHC----CSEEEEECCSSSH
T ss_pred CCCEEEEEe-CCCeE--EEEeCCC-CHHHHHHHHHHHHHhcC----CCcEEEEeCCCCc
Confidence 357788876 34444 3468655 34445667777777556 3445566899986
No 18
>2y8b_A Metallo-B-lactamase; hydrolase, cephalosporins, antibiotic recognition; 1.70A {Pseudomonas aeruginosa} PDB: 2y8a_A 2y87_A 2yz3_A* 2whg_A* 2wrs_A* 1ko3_A 1ko2_A
Probab=23.31 E-value=1.5e+02 Score=27.55 Aligned_cols=51 Identities=12% Similarity=0.270 Sum_probs=31.1
Q ss_pred eEEEEEEEEeCCCCEEEEEEeccCcccHHHHHHHHHHHHHHhCCCCCCCcEEEEeeccCC
Q 011850 18 LRARTFIVAEPQGNRVVFVNLDACMASQIVKIKVIERLKARYGDLYTEKNVAISGIHTHA 77 (476)
Q Consensus 18 L~ARA~Vl~d~~~~rvv~Vs~Dl~~i~~~v~~~V~~~L~~~~G~~i~~~nVlIsATHTHS 77 (476)
....+++|+. +.+. |-+|.+.- .....++.+.|++..| ++.+ .|--||.|.
T Consensus 66 ~~~n~~li~~--~~~~--iLID~G~~-~~~~~~l~~~l~~~~g--~~i~--~VilTH~H~ 116 (265)
T 2y8b_A 66 YSSNGLIVRD--ADEL--LLIDTAWG-AKNTVALLAEIEKQIG--LPVT--RSISTHFHD 116 (265)
T ss_dssp EEEEEEEEEE--TTEE--EEESCCSS-HHHHHHHHHHHHHHTC--SCEE--EEECSSSSH
T ss_pred ccceEEEEEE--CCeE--EEEeCCCC-HHHHHHHHHHHHHhcC--CCeE--EEEeCCCCh
Confidence 3467777776 3443 34688764 3345667778877557 5444 445578775
No 19
>3l6n_A Metallo-beta-lactamase; zinc, hydolase, antibiotics resistance, hydrolase; 1.65A {Chryseobacterium indologenes} SCOP: d.157.1.0
Probab=21.29 E-value=1.1e+02 Score=27.12 Aligned_cols=53 Identities=15% Similarity=0.231 Sum_probs=30.9
Q ss_pred eEEEEEEEEeCCCCEEEEEEeccCcccHHHHHHHHHHHHHHhCCCCCCCcEEEEeeccCCCC
Q 011850 18 LRARTFIVAEPQGNRVVFVNLDACMASQIVKIKVIERLKARYGDLYTEKNVAISGIHTHAGP 79 (476)
Q Consensus 18 L~ARA~Vl~d~~~~rvv~Vs~Dl~~i~~~v~~~V~~~L~~~~G~~i~~~nVlIsATHTHSgP 79 (476)
+.+.+++|+. + .+.+ -+|.+.-. .....+.+.|.+..+ .+.+. |--||.|.-=
T Consensus 29 ~~~n~~li~~-~-~~~i--LiD~G~~~-~~~~~~~~~l~~~~~--~~i~~--ii~TH~H~DH 81 (219)
T 3l6n_A 29 YSANSMYLVT-K-KGVV--LFDVPWEK-VQYQSLMDTIKKRHN--LPVVA--VFATHSHDDR 81 (219)
T ss_dssp EEEEEEEEEE-T-TEEE--EESCCSSG-GGHHHHHHHHHHHHS--CCEEE--EECSSSSTTT
T ss_pred ccceEEEEEe-C-CEEE--EEeCCCCh-HHHHHHHHHHHHhcC--CceeE--EEecCCCccc
Confidence 4567888887 3 3433 36887533 234566677766555 33344 4558887643
No 20
>1vra_A Arginine biosynthesis bifunctional protein ARGJ; 10175521, S genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.00A {Bacillus halodurans}
Probab=21.25 E-value=1.5e+02 Score=28.02 Aligned_cols=46 Identities=15% Similarity=0.174 Sum_probs=33.6
Q ss_pred EEEEEEEEeCCCCEEEEEEeccCcccH--HHHHHHHHHHHHHhCCCCCCCcEEEEeec
Q 011850 19 RARTFIVAEPQGNRVVFVNLDACMASQ--IVKIKVIERLKARYGDLYTEKNVAISGIH 74 (476)
Q Consensus 19 ~ARA~Vl~d~~~~rvv~Vs~Dl~~i~~--~v~~~V~~~L~~~~G~~i~~~nVlIsATH 74 (476)
.+||+|+..+ ..-.+-..+ +-..++.+.+++.+| +++++|++++|=
T Consensus 89 ~~rAvvvNSG--------nANA~TG~~G~~da~~~a~~~A~~lg--i~~~~VlvaSTG 136 (208)
T 1vra_A 89 KLQAMIVNSG--------IANACTGKRGLDDAYTMRAVGAETFH--IPEHYVAVTSTG 136 (208)
T ss_dssp EEEEEEEEEE--------ECCCSCHHHHHHHHHHHHHHHHHHHT--SCGGGEEEEEEE
T ss_pred ceEEEEEccC--------CccccccHHHHHHHHHHHHHHHHHhC--CChhHEEEeCCc
Confidence 5788888773 122333323 346788899999999 999999999983
No 21
>1axh_A Atracotoxin-HVI, ACTX-HVI; neurotoxin, insecticidal toxin, cystine knot, funnel-WEB; NMR {Hadronyche versuta} SCOP: g.3.6.2
Probab=21.11 E-value=41 Score=23.14 Aligned_cols=19 Identities=42% Similarity=1.036 Sum_probs=16.0
Q ss_pred CcccCCCCCCCCCCCcCCC
Q 011850 302 AFCIDSGLPCDFNHSTCGG 320 (476)
Q Consensus 302 ~~c~d~g~~c~~~~s~c~g 320 (476)
+-|+-+|.||-++.+-|.|
T Consensus 2 ~~C~psgQPCpyne~CCs~ 20 (37)
T 1axh_A 2 PTCIPSGQPCPYNENCCSQ 20 (37)
T ss_dssp CCSBCTTSBCSSGGGBSSS
T ss_pred CccccCCCcCCCccccccc
Confidence 4589999999999997765
No 22
>3aj3_A MLR6805 protein, 4-pyridoxolactonase; Zn-protein, metallo-beta-lactamase, hydrolase; 1.58A {Mesorhizobium loti} PDB: 3aj0_A
Probab=20.58 E-value=1.1e+02 Score=28.23 Aligned_cols=56 Identities=13% Similarity=0.198 Sum_probs=36.8
Q ss_pred ecceEEEEEEEEeCCCCEEEEEEeccCcccHHH-------------HHHHHHHHHHHhCCCCCCCcE-EEEeeccCC
Q 011850 15 HFRLRARTFIVAEPQGNRVVFVNLDACMASQIV-------------KIKVIERLKARYGDLYTEKNV-AISGIHTHA 77 (476)
Q Consensus 15 hdrL~ARA~Vl~d~~~~rvv~Vs~Dl~~i~~~v-------------~~~V~~~L~~~~G~~i~~~nV-lIsATHTHS 77 (476)
..++...+++|+. ++ + .|-+|.+.-.... .+.+.+.|++ .| ++.+.| .|--||.|.
T Consensus 30 ~~~~~~~~~li~~-~~-~--~iLiD~G~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g--~~~~~i~~VilTH~H~ 99 (274)
T 3aj3_A 30 EVRFPVYSILIEH-AE-G--RFLIDTGYDYDHVMKVLPFEKPIQEKHQTIPGALGL-LG--LEPRDIDVVVNSHFHF 99 (274)
T ss_dssp EEEEEEEEEEEEE-TT-E--EEEECCCCCHHHHHHHCGGGCCBCCGGGSHHHHHHH-TT--CCGGGCCEEECSCCSG
T ss_pred EEEeeEEEEEEEe-CC-c--cEEEECCCCcccccCccccCCcccCccccHHHHHHH-cC--CCHHHCCEEEecCcCc
Confidence 3467778899987 33 3 3568988765431 3556777766 67 765555 566788886
No 23
>2os5_A Acemif; macrophage migration inhibitory factor, cytokine, nematode,; 1.60A {Ancylostoma ceylanicum} PDB: 3rf4_A* 3rf5_A*
Probab=20.46 E-value=1.2e+02 Score=25.07 Aligned_cols=39 Identities=15% Similarity=0.155 Sum_probs=0.0
Q ss_pred CEEEEEEeccCc-ccHH----HHHHHHHHHHHHhCCCCCCCcEEEE
Q 011850 31 NRVVFVNLDACM-ASQI----VKIKVIERLKARYGDLYTEKNVAIS 71 (476)
Q Consensus 31 ~rvv~Vs~Dl~~-i~~~----v~~~V~~~L~~~~G~~i~~~nVlIs 71 (476)
...++|.+.+.. ...+ +..++-+.|++.+| +++++|.|.
T Consensus 55 ~~~~~i~I~~~~g~~~eqk~~l~~~i~~~l~~~lg--i~~~~v~I~ 98 (119)
T 2os5_A 55 NPVAVIKVESIGALSADDNIRHTQKITQFCQDTLK--LPKDKVIIT 98 (119)
T ss_dssp SSCEEEEEEESSCCCHHHHHHHHHHHHHHHHHHHC--CCGGGEEEE
T ss_pred CCeEEEEEEEecCCCHHHHHHHHHHHHHHHHHHhC--cCcccEEEE
No 24
>1n62_B Carbon monoxide dehydrogenase large chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.41.1.1 d.133.1.1 PDB: 1n5w_B* 1n61_B* 1n60_B* 1n63_B* 1zxi_B*
Probab=20.19 E-value=1.6e+02 Score=32.91 Aligned_cols=106 Identities=12% Similarity=0.130 Sum_probs=64.1
Q ss_pred EEEEEEEeCCCCEEEEEEeccCcccHHHHHHHHHHHHHHhCCCCCCCcEEEEeeccCCCCCCCccchhhhccccc-cchh
Q 011850 20 ARTFIVAEPQGNRVVFVNLDACMASQIVKIKVIERLKARYGDLYTEKNVAISGIHTHAGPGGYLQYVVYIVTSLG-FVRQ 98 (476)
Q Consensus 20 ARA~Vl~d~~~~rvv~Vs~Dl~~i~~~v~~~V~~~L~~~~G~~i~~~nVlIsATHTHSgPgG~~~~~l~~it~~G-f~~~ 98 (476)
+.|.|--+++++ +.|..-..-+.+.....+.+.+++.+| ++.++|-|..+-|...|.+...+---.....| ....
T Consensus 507 ~~a~v~l~~DG~--v~v~~g~~e~GqG~~T~~aQiaAe~LG--ip~e~V~v~~~DT~~~p~~~~t~aSr~t~~~G~Av~~ 582 (809)
T 1n62_B 507 DSAEIRIHPTGS--VIARMGTKSQGQGHETTYAQIIATELG--IPADDIMIEEGNTDTAPYGLGTYGSRSTPTAGAATAV 582 (809)
T ss_dssp EEEEEEECTTSC--EEEEESCCCSSSCHHHHHHHHHHHHHT--CCGGGEEEECCBTTTSCCCCCSCTTCTTTTHHHHHHH
T ss_pred ccEEEEEecCCe--EEEEECCCCCCCCHHHHHHHHHHHHhC--CCHHHEEEecCCCCCCCCCCCcccchHHHHHHHHHHH
Confidence 444444332333 556666777778888899999999999 99999999999999888644321100111111 3444
Q ss_pred HHHHHHHHHHHHHHHHHhcCCceEEEEEEEEe
Q 011850 99 SFDALVDGIEKSVLQAHENLRPGSIFVNKGEL 130 (476)
Q Consensus 99 y~~~lvdgIv~AI~~A~~nl~Pa~l~~g~g~~ 130 (476)
-.+.|.+++.+...+.+ ...|-.|.+..|.+
T Consensus 583 Aa~~l~~~l~~~aa~~l-~~~~~~l~~~~g~v 613 (809)
T 1n62_B 583 AARKIKAKAQMIAAHML-EVHEGDLEWDVDRF 613 (809)
T ss_dssp HHHHHHHHHHHHHHHHH-TSCGGGEEECSSEE
T ss_pred HHHHHHHHHHHHHHHHh-CCCHHHEEEeCCEE
Confidence 55566666655444333 34455555554444
No 25
>3b64_A Macrophage migration inhibitory factor-like protein; cytokine, MIF, LM1740MIF, lmmif, unknown function; 1.03A {Leishmania major}
Probab=20.10 E-value=3.4e+02 Score=21.76 Aligned_cols=85 Identities=14% Similarity=0.078 Sum_probs=53.2
Q ss_pred cHHHHHHHHHHHH-HHhCCCCCCCcEEEEeeccCC-CCCCCcc-chhhhcccc-ccchhHHHHHHHHHHHHHHHHHhcCC
Q 011850 44 SQIVKIKVIERLK-ARYGDLYTEKNVAISGIHTHA-GPGGYLQ-YVVYIVTSL-GFVRQSFDALVDGIEKSVLQAHENLR 119 (476)
Q Consensus 44 ~~~v~~~V~~~L~-~~~G~~i~~~nVlIsATHTHS-gPgG~~~-~~l~~it~~-Gf~~~y~~~lvdgIv~AI~~A~~nl~ 119 (476)
...+.+++-+.|+ +.+| .|++-++++-.+-.. -.+|... ..+-++... |..++--+.+...|.+++.+.. ...
T Consensus 15 ~~~l~~~~~~~l~~~~~g--kPe~~~~v~~~~~~~~~~~G~~~~~~~i~i~~~~g~~~eqk~~l~~~i~~~l~~~l-gi~ 91 (112)
T 3b64_A 15 KRENLAQVYRAVTRDVLG--KPEDLVMMTFHDSTPMHFFGSTDPVACVRVEALGGYGPSEPEKVTSIVTAAITKEC-GIV 91 (112)
T ss_dssp HHHHHHHHHHHHHHHTSC--SCGGGCEEEEECSCCCCBTTBCSSCEEEEEECTTCCCTTHHHHHHHHHHHHHHHHH-CCC
T ss_pred HHHHHHHHHHHHHHHHhC--CCHHHEEEEEeCCceEEECCCCCCEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHh-CcC
Confidence 3456778888888 8899 888877776653211 1122221 122244433 4667777888888888887654 667
Q ss_pred ceEEEEEEEEec
Q 011850 120 PGSIFVNKGELL 131 (476)
Q Consensus 120 Pa~l~~g~g~~~ 131 (476)
|-++.+.-.+..
T Consensus 92 ~~~v~I~~~e~~ 103 (112)
T 3b64_A 92 ADRIFVLYFSPL 103 (112)
T ss_dssp GGGEEEEEECCS
T ss_pred cceEEEEEEEhh
Confidence 766666655554
No 26
>2dhm_A Protein BOLA; stationary-phase, stress-induced, morphogene, structural GEN NPPSFA; NMR {Escherichia coli str}
Probab=20.03 E-value=1.1e+02 Score=25.69 Aligned_cols=37 Identities=16% Similarity=0.221 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEeeccCCCCCCCccch
Q 011850 47 VKIKVIERLKARYGDLYTEKNVAISGIHTHAGPGGYLQYV 86 (476)
Q Consensus 47 v~~~V~~~L~~~~G~~i~~~nVlIsATHTHSgPgG~~~~~ 86 (476)
+.++|+++|.+.+. +..=-++--+|-|++|+|...++
T Consensus 10 ~~~~I~~~L~~~l~---p~~l~V~d~S~~H~~~~G~gsHf 46 (107)
T 2dhm_A 10 IRERIEEKLRAAFQ---PVFLEVVDESYRHNVPAGSESHF 46 (107)
T ss_dssp HHHHHHHHHHHHTC---CSCCEEEECCCCCSSCCCSCCCE
T ss_pred HHHHHHHHHHhcCC---CcEEEEEECcccccCCCCCCceE
Confidence 35889999998766 33334556899999998754433
Done!