BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011851
(476 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 202 bits (514), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 121/304 (39%), Positives = 179/304 (58%), Gaps = 18/304 (5%)
Query: 107 QLRKFSFNELKSATKSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHD 166
QL++FS EL+ A+ +F + +LG GGFG VYKG + G VAVK L +
Sbjct: 24 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKG----------RLADGTLVAVKRLKEE 73
Query: 167 GLQGHK-EWLAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRR---S 222
QG + ++ EV + +H NL++L G C+ +RLLVY +M GS+ + L R
Sbjct: 74 RXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQ 133
Query: 223 LPLPWSIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGP 282
PL W R +IAL +A+GLA+LH+ + +I+RD K +NILLD E+ A + DFGLAK
Sbjct: 134 PPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 193
Query: 283 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 342
D HV V GT G+ APEY+ TG + K+DV+ +GV+LLE++TG+R+ D R +
Sbjct: 194 YKD-XHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDD 252
Query: 343 N--LVEWARPQLGERRRFYRLIDPCLEGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVV 400
+ L++W + L E ++ L+D L+G + + E+ IQ+A C RP+MSEVV
Sbjct: 253 DVMLLDWVKGLLKE-KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVV 311
Query: 401 EALK 404
L+
Sbjct: 312 RMLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 200 bits (509), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 120/304 (39%), Positives = 178/304 (58%), Gaps = 18/304 (5%)
Query: 107 QLRKFSFNELKSATKSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHD 166
QL++FS EL+ A+ +F + +LG GGFG VYKG + G VAVK L +
Sbjct: 16 QLKRFSLRELQVASDNFXNKNILGRGGFGKVYKG----------RLADGXLVAVKRLKEE 65
Query: 167 GLQGHK-EWLAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRR---S 222
QG + ++ EV + +H NL++L G C+ +RLLVY +M GS+ + L R
Sbjct: 66 RTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQ 125
Query: 223 LPLPWSIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGP 282
PL W R +IAL +A+GLA+LH+ + +I+RD K +NILLD E+ A + DFGLAK
Sbjct: 126 PPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 185
Query: 283 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 342
D HV V G G+ APEY+ TG + K+DV+ +GV+LLE++TG+R+ D R +
Sbjct: 186 YKD-XHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDD 244
Query: 343 N--LVEWARPQLGERRRFYRLIDPCLEGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVV 400
+ L++W + L E ++ L+D L+G + + E+ IQ+A C RP+MSEVV
Sbjct: 245 DVMLLDWVKGLLKE-KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVV 303
Query: 401 EALK 404
L+
Sbjct: 304 RMLE 307
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 112/293 (38%), Positives = 165/293 (56%), Gaps = 17/293 (5%)
Query: 115 ELKSATKSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEW 174
+L+ AT +F + L+G G FG VYKG + G VA+K + QG +E+
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLR----------DGAKVALKRRTPESSQGIEEF 82
Query: 175 LAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP---LPWSIRM 231
E+ L HP+LV LIG C E ++ +L+Y++M G+L+ HL+ LP + W R+
Sbjct: 83 ETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRL 142
Query: 232 KIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVST 291
+I + AA+GL +LH A +I+RD K+ NILLD + K++DFG++K G E D+TH+
Sbjct: 143 EICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXX 199
Query: 292 RVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPQ 351
V GT GY PEY + G LT KSDVYSFGVVL E+L R ++ ++ P NL EWA +
Sbjct: 200 VVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWA-VE 258
Query: 352 LGERRRFYRLIDPCLEGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALK 404
+ +++DP L + K A CL + RP M +V+ L+
Sbjct: 259 SHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 181 bits (458), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 111/293 (37%), Positives = 164/293 (55%), Gaps = 17/293 (5%)
Query: 115 ELKSATKSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEW 174
+L+ AT +F + L+G G FG VYKG + G VA+K + QG +E+
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLR----------DGAKVALKRRTPESSQGIEEF 82
Query: 175 LAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP---LPWSIRM 231
E+ L HP+LV LIG C E ++ +L+Y++M G+L+ HL+ LP + W R+
Sbjct: 83 ETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRL 142
Query: 232 KIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVST 291
+I + AA+GL +LH A +I+RD K+ NILLD + K++DFG++K G E +TH+
Sbjct: 143 EICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXX 199
Query: 292 RVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPQ 351
V GT GY PEY + G LT KSDVYSFGVVL E+L R ++ ++ P NL EWA +
Sbjct: 200 VVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWA-VE 258
Query: 352 LGERRRFYRLIDPCLEGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALK 404
+ +++DP L + K A CL + RP M +V+ L+
Sbjct: 259 SHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 111/308 (36%), Positives = 168/308 (54%), Gaps = 22/308 (7%)
Query: 107 QLRKFSFNELKSATKSF--RPECL----LGEGGFGCVYKGWINMNGTATVKPGTGLPVAV 160
+ FSF ELK+ T +F RP + +GEGGFG VYKG++N A K + +
Sbjct: 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITT 70
Query: 161 KTLNHDGLQGHKEWLAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHL-- 218
+ L +++ E+ + H NLV+L+G + D LVY +MP GSL + L
Sbjct: 71 EELK-------QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSC 123
Query: 219 FRRSLPLPWSIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLA 278
+ PL W +R KIA AA G+ FLHE I+RD K++NILLD + AK+SDFGLA
Sbjct: 124 LDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLA 180
Query: 279 KDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRP 338
+ + +T + +R++GT Y APE + G +T KSD+YSFGVVLLE++TG ++D++R
Sbjct: 181 RASEKFAQTVMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHRE 239
Query: 339 NGEHNLVEWARPQLGERRRFYRLIDPCLEGCFSIKGAEKTIQLAASCLNRDQKARPRMSE 398
L++ E + ID + S E +A+ CL+ + RP + +
Sbjct: 240 --PQLLLDIKEEIEDEEKTIEDYIDKKMNDADS-TSVEAMYSVASQCLHEKKNKRPDIKK 296
Query: 399 VVEALKPL 406
V + L+ +
Sbjct: 297 VQQLLQEM 304
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 171 bits (434), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 111/308 (36%), Positives = 167/308 (54%), Gaps = 22/308 (7%)
Query: 107 QLRKFSFNELKSATKSF--RPECL----LGEGGFGCVYKGWINMNGTATVKPGTGLPVAV 160
+ FSF ELK+ T +F RP + +GEGGFG VYKG++N A K + +
Sbjct: 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITT 70
Query: 161 KTLNHDGLQGHKEWLAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHL-- 218
+ L +++ E+ + H NLV+L+G + D LVY +MP GSL + L
Sbjct: 71 EELK-------QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSC 123
Query: 219 FRRSLPLPWSIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLA 278
+ PL W +R KIA AA G+ FLHE I+RD K++NILLD + AK+SDFGLA
Sbjct: 124 LDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLA 180
Query: 279 KDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRP 338
+ + +T + R++GT Y APE + G +T KSD+YSFGVVLLE++TG ++D++R
Sbjct: 181 RASEKFAQTVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHRE 239
Query: 339 NGEHNLVEWARPQLGERRRFYRLIDPCLEGCFSIKGAEKTIQLAASCLNRDQKARPRMSE 398
L++ E + ID + S E +A+ CL+ + RP + +
Sbjct: 240 --PQLLLDIKEEIEDEEKTIEDYIDKKMNDADS-TSVEAMYSVASQCLHEKKNKRPDIKK 296
Query: 399 VVEALKPL 406
V + L+ +
Sbjct: 297 VQQLLQEM 304
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 110/308 (35%), Positives = 166/308 (53%), Gaps = 22/308 (7%)
Query: 107 QLRKFSFNELKSATKSF--RPECL----LGEGGFGCVYKGWINMNGTATVKPGTGLPVAV 160
+ FSF ELK+ T +F RP + +GEGGFG VYKG++N A K + +
Sbjct: 5 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITT 64
Query: 161 KTLNHDGLQGHKEWLAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHL-- 218
+ L +++ E+ + H NLV+L+G + D LVY +MP GSL + L
Sbjct: 65 EELK-------QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSC 117
Query: 219 FRRSLPLPWSIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLA 278
+ PL W +R KIA AA G+ FLHE I+RD K++NILLD + AK+SDFGLA
Sbjct: 118 LDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLA 174
Query: 279 KDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRP 338
+ + + + R++GT Y APE + G +T KSD+YSFGVVLLE++TG ++D++R
Sbjct: 175 RASEKFAQXVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHRE 233
Query: 339 NGEHNLVEWARPQLGERRRFYRLIDPCLEGCFSIKGAEKTIQLAASCLNRDQKARPRMSE 398
L++ E + ID + S E +A+ CL+ + RP + +
Sbjct: 234 --PQLLLDIKEEIEDEEKTIEDYIDKKMNDADS-TSVEAMYSVASQCLHEKKNKRPDIKK 290
Query: 399 VVEALKPL 406
V + L+ +
Sbjct: 291 VQQLLQEM 298
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 161 bits (408), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 109/306 (35%), Positives = 160/306 (52%), Gaps = 22/306 (7%)
Query: 107 QLRKFSFNELKSATKSF--RPECL----LGEGGFGCVYKGWINMNGTATVKPGTGLPVAV 160
+ FSF ELK+ T +F RP + GEGGFG VYKG++N A K + +
Sbjct: 2 RFHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITT 61
Query: 161 KTLNHDGLQGHKEWLAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHL-- 218
+ L +++ E+ H NLV+L+G + D LVY + P GSL + L
Sbjct: 62 EELK-------QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSC 114
Query: 219 FRRSLPLPWSIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLA 278
+ PL W R KIA AA G+ FLHE I+RD K++NILLD + AK+SDFGLA
Sbjct: 115 LDGTPPLSWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLA 171
Query: 279 KDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRP 338
+ + + +R++GT Y APE + G +T KSD+YSFGVVLLE++TG ++D++R
Sbjct: 172 RASEKFAQXVXXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHRE 230
Query: 339 NGEHNLVEWARPQLGERRRFYRLIDPCLEGCFSIKGAEKTIQLAASCLNRDQKARPRMSE 398
L++ E + ID S E +A+ CL+ + RP + +
Sbjct: 231 --PQLLLDIKEEIEDEEKTIEDYIDKKXNDADST-SVEAXYSVASQCLHEKKNKRPDIKK 287
Query: 399 VVEALK 404
V + L+
Sbjct: 288 VQQLLQ 293
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/217 (34%), Positives = 112/217 (51%), Gaps = 31/217 (14%)
Query: 126 ECLLGEGGFGCVYKG-WINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWL----AEVNY 180
E ++G GGFG VY+ WI G VAVK HD + + + E
Sbjct: 12 EEIIGIGGFGKVYRAFWI------------GDEVAVKAARHDPDEDISQTIENVRQEAKL 59
Query: 181 LGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
L HPN++ L G C+++ LV EF G L L + +P I + A+ A+G
Sbjct: 60 FAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPP--DILVNWAVQIARG 117
Query: 241 LAFLHEEAEKPVIYRDFKTSNILL-----DGEYN---AKLSDFGLAKDGPEGDKTHVSTR 292
+ +LH+EA P+I+RD K+SNIL+ +G+ + K++DFGLA++ K +
Sbjct: 118 MNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAA-- 175
Query: 293 VMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
G Y + APE + + SDV+S+GV+L E+LTG
Sbjct: 176 --GAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTG 210
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 142/302 (47%), Gaps = 45/302 (14%)
Query: 119 ATKSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTL-------NHDGLQGH 171
A E +G+GGFG V+KG + + + VA+K+L + ++
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSV---------VAIKSLILGDSEGETEMIEKF 67
Query: 172 KEWLAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRM 231
+E+ EV + L HPN+VKL G + + +V EF+P G L + L ++ P+ WS+++
Sbjct: 68 QEFQREVFIMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKL 125
Query: 232 KIALDAAKGLAFLHEEAEKPVIYRDFKTSNILL-----DGEYNAKLSDFGLAKDGPEGDK 286
++ LD A G+ ++ + P+++RD ++ NI L + AK++DFGL++
Sbjct: 126 RLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQS----- 179
Query: 287 THVSTRVMGTYGYAAPEYVMTGH--LTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNL 344
H + ++G + + APE + T K+D YSF ++L +LTG D+ G+
Sbjct: 180 VHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYS-YGKIKF 238
Query: 345 VEWARPQLGERRRFYRLIDPCLEGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALK 404
+ R + G R P L + C + D K RP S +V+ L
Sbjct: 239 INMIREE-GLRPTIPEDCPPRLRNVIEL------------CWSGDPKKRPHFSYIVKELS 285
Query: 405 PL 406
L
Sbjct: 286 EL 287
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 141/302 (46%), Gaps = 45/302 (14%)
Query: 119 ATKSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTL-------NHDGLQGH 171
A E +G+GGFG V+KG + + + VA+K+L + ++
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSV---------VAIKSLILGDSEGETEMIEKF 67
Query: 172 KEWLAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRM 231
+E+ EV + L HPN+VKL G + + +V EF+P G L + L ++ P+ WS+++
Sbjct: 68 QEFQREVFIMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKL 125
Query: 232 KIALDAAKGLAFLHEEAEKPVIYRDFKTSNILL-----DGEYNAKLSDFGLAKDGPEGDK 286
++ LD A G+ ++ + P+++RD ++ NI L + AK++DFG ++
Sbjct: 126 RLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQS----- 179
Query: 287 THVSTRVMGTYGYAAPEYVMTGH--LTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNL 344
H + ++G + + APE + T K+D YSF ++L +LTG D+ G+
Sbjct: 180 VHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYS-YGKIKF 238
Query: 345 VEWARPQLGERRRFYRLIDPCLEGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALK 404
+ R + G R P L + C + D K RP S +V+ L
Sbjct: 239 INMIREE-GLRPTIPEDCPPRLRNVIEL------------CWSGDPKKRPHFSYIVKELS 285
Query: 405 PL 406
L
Sbjct: 286 EL 287
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 141/302 (46%), Gaps = 45/302 (14%)
Query: 119 ATKSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTL-------NHDGLQGH 171
A E +G+GGFG V+KG + + + VA+K+L + ++
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSV---------VAIKSLILGDSEGETEMIEKF 67
Query: 172 KEWLAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRM 231
+E+ EV + L HPN+VKL G + + +V EF+P G L + L ++ P+ WS+++
Sbjct: 68 QEFQREVFIMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKL 125
Query: 232 KIALDAAKGLAFLHEEAEKPVIYRDFKTSNILL-----DGEYNAKLSDFGLAKDGPEGDK 286
++ LD A G+ ++ + P+++RD ++ NI L + AK++DF L++
Sbjct: 126 RLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQS----- 179
Query: 287 THVSTRVMGTYGYAAPEYVMTGH--LTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNL 344
H + ++G + + APE + T K+D YSF ++L +LTG D+ G+
Sbjct: 180 VHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYS-YGKIKF 238
Query: 345 VEWARPQLGERRRFYRLIDPCLEGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALK 404
+ R + G R P L + C + D K RP S +V+ L
Sbjct: 239 INMIREE-GLRPTIPEDCPPRLRNVIEL------------CWSGDPKKRPHFSYIVKELS 285
Query: 405 PL 406
L
Sbjct: 286 EL 287
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 127/283 (44%), Gaps = 36/283 (12%)
Query: 129 LGEGGFGCVYKG-WINMNGTATVKPGTGLPVAVKTLNHDGLQGHK--EWLAEVNYLGGLI 185
+G G FG V++ W G VAVK L + E+L EV + L
Sbjct: 45 IGAGSFGTVHRAEW------------HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLR 92
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSL--PLPWSIRMKIALDAAKGLAF 243
HPN+V +G + +V E++ RGSL L + L R+ +A D AKG+ +
Sbjct: 93 HPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNY 152
Query: 244 LHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 303
LH P+++RD K+ N+L+D +Y K+ DFGL++ + S GT + APE
Sbjct: 153 LHNR-NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSR--LKASXFLXSKXAAGTPEWMAPE 209
Query: 304 YVMTGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPQLGERRRFYRLID 363
+ KSDVYSFGV+L E+ T ++ P V + +L R +
Sbjct: 210 VLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVA 269
Query: 364 PCLEGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPL 406
+EGC++ + RP + +++ L+PL
Sbjct: 270 AIIEGCWT----------------NEPWKRPSFATIMDLLRPL 296
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/204 (36%), Positives = 106/204 (51%), Gaps = 14/204 (6%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHD-GLQGHKEWLAEVNYLGGLIHP 187
LGEG FG V ++ GTG VAVK L D G Q W E++ L L H
Sbjct: 22 LGEGHFGKV-----SLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHE 76
Query: 188 NLVKLIGCCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLH 245
+++K GCC + ++ LV E++P GSL ++L R S+ L + + A +G+A+LH
Sbjct: 77 HIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGL--AQLLLFAQQICEGMAYLH 134
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTH-VSTRVMGTYGYAAPEY 304
+ I+R+ N+LLD + K+ DFGLAK PEG + + V + APE
Sbjct: 135 SQH---YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPEC 191
Query: 305 VMTGHLTAKSDVYSFGVVLLEMLT 328
+ SDV+SFGV L E+LT
Sbjct: 192 LKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/204 (36%), Positives = 106/204 (51%), Gaps = 14/204 (6%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHD-GLQGHKEWLAEVNYLGGLIHP 187
LGEG FG V ++ GTG VAVK L D G Q W E++ L L H
Sbjct: 22 LGEGHFGKV-----SLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHE 76
Query: 188 NLVKLIGCCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLH 245
+++K GCC + ++ LV E++P GSL ++L R S+ L + + A +G+A+LH
Sbjct: 77 HIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGL--AQLLLFAQQICEGMAYLH 134
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTH-VSTRVMGTYGYAAPEY 304
+ I+R+ N+LLD + K+ DFGLAK PEG + + V + APE
Sbjct: 135 AQH---YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPEC 191
Query: 305 VMTGHLTAKSDVYSFGVVLLEMLT 328
+ SDV+SFGV L E+LT
Sbjct: 192 LKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/287 (32%), Positives = 132/287 (45%), Gaps = 30/287 (10%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKE-WLAEVNYLGGLIHP 187
LGEG FG V ++ GTG VAVK L D H+ W E++ L L H
Sbjct: 39 LGEGHFGKV-----SLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHE 93
Query: 188 NLVKLIGCCIEDD---QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFL 244
+++K GCC ED LV E++P GSL ++L R S+ L + + A +G+A+L
Sbjct: 94 HIIKYKGCC-EDAGAASLQLVMEYVPLGSLRDYLPRHSIGL--AQLLLFAQQICEGMAYL 150
Query: 245 HEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTH-VSTRVMGTYGYAAPE 303
H + I+RD N+LLD + K+ DFGLAK PEG + + V + APE
Sbjct: 151 HAQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPE 207
Query: 304 YVMTGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPQLGERR------R 357
+ SDV+SFGV L E+LT S ++ P L+ A+ Q+ R R
Sbjct: 208 CLKEYKFYYASDVWSFGVTLYELLTHCDS-SQSPPTKFLELIGIAQGQMTVLRLTELLER 266
Query: 358 FYRLIDPCLEGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALK 404
RL P K + L +C + RP ++ LK
Sbjct: 267 GERLPRP-------DKCPAEVYHLMKNCWETEASFRPTFENLIPILK 306
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 102/205 (49%), Gaps = 13/205 (6%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGH-KEWLAEVNYLGGLIH 186
++G G FGCVY +GT G + AVK+LN G ++L E + H
Sbjct: 96 VIGRGHFGCVY------HGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 149
Query: 187 PNLVKLIGCCIEDD-QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLH 245
PN++ L+G C+ + L+V +M G L N + + + L AKG+ FL
Sbjct: 150 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL- 208
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKD--GPEGDKTHVSTRVMGTYGYAAPE 303
A K ++RD N +LD ++ K++DFGLA+D E D H T + A E
Sbjct: 209 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 266
Query: 304 YVMTGHLTAKSDVYSFGVVLLEMLT 328
+ T T KSDV+SFGV+L E++T
Sbjct: 267 SLQTQKFTTKSDVWSFGVLLWELMT 291
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 102/205 (49%), Gaps = 13/205 (6%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGH-KEWLAEVNYLGGLIH 186
++G G FGCVY +GT G + AVK+LN G ++L E + H
Sbjct: 35 VIGRGHFGCVY------HGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 88
Query: 187 PNLVKLIGCCIEDD-QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLH 245
PN++ L+G C+ + L+V +M G L N + + + L AKG+ FL
Sbjct: 89 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL- 147
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKD--GPEGDKTHVSTRVMGTYGYAAPE 303
A K ++RD N +LD ++ K++DFGLA+D E D H T + A E
Sbjct: 148 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 205
Query: 304 YVMTGHLTAKSDVYSFGVVLLEMLT 328
+ T T KSDV+SFGV+L E++T
Sbjct: 206 SLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 102/205 (49%), Gaps = 13/205 (6%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGH-KEWLAEVNYLGGLIH 186
++G G FGCVY +GT G + AVK+LN G ++L E + H
Sbjct: 38 VIGRGHFGCVY------HGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 91
Query: 187 PNLVKLIGCCIEDD-QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLH 245
PN++ L+G C+ + L+V +M G L N + + + L AKG+ FL
Sbjct: 92 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL- 150
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKD--GPEGDKTHVSTRVMGTYGYAAPE 303
A K ++RD N +LD ++ K++DFGLA+D E D H T + A E
Sbjct: 151 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALE 208
Query: 304 YVMTGHLTAKSDVYSFGVVLLEMLT 328
+ T T KSDV+SFGV+L E++T
Sbjct: 209 SLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 130/284 (45%), Gaps = 38/284 (13%)
Query: 129 LGEGGFGCVYKG-WINMNGTATVKPGTGLPVAVKTLNHDGLQGHK--EWLAEVNYLGGLI 185
+G G FG V++ W G VAVK L + E+L EV + L
Sbjct: 45 IGAGSFGTVHRAEW------------HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLR 92
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSL--PLPWSIRMKIALDAAKGLAF 243
HPN+V +G + +V E++ RGSL L + L R+ +A D AKG+ +
Sbjct: 93 HPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNY 152
Query: 244 LHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTR-VMGTYGYAAP 302
LH P+++R+ K+ N+L+D +Y K+ DFGL++ T +S++ GT + AP
Sbjct: 153 LHNR-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSR---LKASTFLSSKSAAGTPEWMAP 208
Query: 303 EYVMTGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPQLGERRRFYRLI 362
E + KSDVYSFGV+L E+ T ++ P V + +L R +
Sbjct: 209 EVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQV 268
Query: 363 DPCLEGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPL 406
+EGC++ + RP + +++ L+PL
Sbjct: 269 AAIIEGCWT----------------NEPWKRPSFATIMDLLRPL 296
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 102/205 (49%), Gaps = 13/205 (6%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGH-KEWLAEVNYLGGLIH 186
++G G FGCVY +GT G + AVK+LN G ++L E + H
Sbjct: 38 VIGRGHFGCVY------HGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 91
Query: 187 PNLVKLIGCCIEDD-QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLH 245
PN++ L+G C+ + L+V +M G L N + + + L AKG+ FL
Sbjct: 92 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL- 150
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKD--GPEGDKTHVSTRVMGTYGYAAPE 303
A K ++RD N +LD ++ K++DFGLA+D E D H T + A E
Sbjct: 151 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 208
Query: 304 YVMTGHLTAKSDVYSFGVVLLEMLT 328
+ T T KSDV+SFGV+L E++T
Sbjct: 209 SLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 102/205 (49%), Gaps = 13/205 (6%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGH-KEWLAEVNYLGGLIH 186
++G G FGCVY +GT G + AVK+LN G ++L E + H
Sbjct: 37 VIGRGHFGCVY------HGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 90
Query: 187 PNLVKLIGCCIEDD-QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLH 245
PN++ L+G C+ + L+V +M G L N + + + L AKG+ FL
Sbjct: 91 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL- 149
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKD--GPEGDKTHVSTRVMGTYGYAAPE 303
A K ++RD N +LD ++ K++DFGLA+D E D H T + A E
Sbjct: 150 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 207
Query: 304 YVMTGHLTAKSDVYSFGVVLLEMLT 328
+ T T KSDV+SFGV+L E++T
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 102/205 (49%), Gaps = 13/205 (6%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGH-KEWLAEVNYLGGLIH 186
++G G FGCVY +GT G + AVK+LN G ++L E + H
Sbjct: 37 VIGRGHFGCVY------HGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 90
Query: 187 PNLVKLIGCCIEDD-QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLH 245
PN++ L+G C+ + L+V +M G L N + + + L AKG+ FL
Sbjct: 91 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL- 149
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKD--GPEGDKTHVSTRVMGTYGYAAPE 303
A K ++RD N +LD ++ K++DFGLA+D E D H T + A E
Sbjct: 150 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 207
Query: 304 YVMTGHLTAKSDVYSFGVVLLEMLT 328
+ T T KSDV+SFGV+L E++T
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 102/205 (49%), Gaps = 13/205 (6%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGH-KEWLAEVNYLGGLIH 186
++G G FGCVY +GT G + AVK+LN G ++L E + H
Sbjct: 42 VIGRGHFGCVY------HGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 95
Query: 187 PNLVKLIGCCIEDD-QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLH 245
PN++ L+G C+ + L+V +M G L N + + + L AKG+ FL
Sbjct: 96 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL- 154
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKD--GPEGDKTHVSTRVMGTYGYAAPE 303
A K ++RD N +LD ++ K++DFGLA+D E D H T + A E
Sbjct: 155 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 212
Query: 304 YVMTGHLTAKSDVYSFGVVLLEMLT 328
+ T T KSDV+SFGV+L E++T
Sbjct: 213 SLQTQKFTTKSDVWSFGVLLWELMT 237
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 109/214 (50%), Gaps = 17/214 (7%)
Query: 129 LGEGGFGCVYKG-WINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHP 187
+G G FG V+ G W+N + VA+KT+ +G ++++ E + L HP
Sbjct: 15 IGSGQFGLVHLGYWLNKD-----------KVAIKTIR-EGAMSEEDFIEEAEVMMKLSHP 62
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEE 247
LV+L G C+E LV+EFM G L ++L + + + LD +G+A+L E
Sbjct: 63 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 122
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
+ VI+RD N L+ K+SDFG+ + + D+ ST +A+PE
Sbjct: 123 S---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSF 178
Query: 308 GHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGE 341
++KSDV+SFGV++ E+ + + +NR N E
Sbjct: 179 SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 212
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 108/214 (50%), Gaps = 17/214 (7%)
Query: 129 LGEGGFGCVYKG-WINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHP 187
+G G FG V+ G W+N + VA+KT+ +G ++++ E + L HP
Sbjct: 15 IGSGQFGLVHLGYWLNKD-----------KVAIKTIR-EGAMSEEDFIEEAEVMMKLSHP 62
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEE 247
LV+L G C+E LV+EFM G L ++L + + + LD +G+A+L E
Sbjct: 63 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 122
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
VI+RD N L+ K+SDFG+ + + D+ ST +A+PE
Sbjct: 123 C---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSF 178
Query: 308 GHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGE 341
++KSDV+SFGV++ E+ + + +NR N E
Sbjct: 179 SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 212
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 108/214 (50%), Gaps = 17/214 (7%)
Query: 129 LGEGGFGCVYKG-WINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHP 187
+G G FG V+ G W+N + VA+KT+ +G ++++ E + L HP
Sbjct: 18 IGSGQFGLVHLGYWLNKD-----------KVAIKTIR-EGAMSEEDFIEEAEVMMKLSHP 65
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEE 247
LV+L G C+E LV+EFM G L ++L + + + LD +G+A+L E
Sbjct: 66 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 125
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
VI+RD N L+ K+SDFG+ + + D+ ST +A+PE
Sbjct: 126 C---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSF 181
Query: 308 GHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGE 341
++KSDV+SFGV++ E+ + + +NR N E
Sbjct: 182 SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 215
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 108/214 (50%), Gaps = 17/214 (7%)
Query: 129 LGEGGFGCVYKG-WINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHP 187
+G G FG V+ G W+N + VA+KT+ +G ++++ E + L HP
Sbjct: 13 IGSGQFGLVHLGYWLNKD-----------KVAIKTIR-EGAMSEEDFIEEAEVMMKLSHP 60
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEE 247
LV+L G C+E LV+EFM G L ++L + + + LD +G+A+L E
Sbjct: 61 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 120
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
VI+RD N L+ K+SDFG+ + + D+ ST +A+PE
Sbjct: 121 C---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSF 176
Query: 308 GHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGE 341
++KSDV+SFGV++ E+ + + +NR N E
Sbjct: 177 SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 210
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 107/214 (50%), Gaps = 17/214 (7%)
Query: 129 LGEGGFGCVYKG-WINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHP 187
+G G FG V+ G W+N + VA+KT+ +G +++ E + L HP
Sbjct: 35 IGSGQFGLVHLGYWLNKD-----------KVAIKTIK-EGSMSEDDFIEEAEVMMKLSHP 82
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEE 247
LV+L G C+E LV+EFM G L ++L + + + LD +G+A+L E
Sbjct: 83 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 142
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
VI+RD N L+ K+SDFG+ + + D+ ST +A+PE
Sbjct: 143 C---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSF 198
Query: 308 GHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGE 341
++KSDV+SFGV++ E+ + + +NR N E
Sbjct: 199 SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 232
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 138/297 (46%), Gaps = 54/297 (18%)
Query: 121 KSFRPECLLGEGGFGCVYKG-WINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVN 179
K E ++G G FG V K W + VA+K + + + K ++ E+
Sbjct: 9 KEIEVEEVVGRGAFGVVCKAKWRAKD------------VAIKQIESESER--KAFIVELR 54
Query: 180 YLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPW---SIRMKIALD 236
L + HPN+VKL G C+ + LV E+ GSL N + + PLP+ + M L
Sbjct: 55 QLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYN-VLHGAEPLPYYTAAHAMSWCLQ 111
Query: 237 AAKGLAFLHEEAEKPVIYRDFKTSNILL-DGEYNAKLSDFGLAKDGPEGDKTHVSTRVMG 295
++G+A+LH K +I+RD K N+LL G K+ DFG A D +TH+ T G
Sbjct: 112 CSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACD----IQTHM-TNNKG 166
Query: 296 TYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWA-----RP 350
+ + APE + + K DV+S+G++L E++T R+ D+ G + WA RP
Sbjct: 167 SAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEI--GGPAFRIMWAVHNGTRP 224
Query: 351 QLGERRRFYRLIDPCLEGCFSIKGAEKTIQ-LAASCLNRDQKARPRMSEVVEALKPL 406
L IK K I+ L C ++D RP M E+V+ + L
Sbjct: 225 PL-------------------IKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHL 262
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 138/297 (46%), Gaps = 54/297 (18%)
Query: 121 KSFRPECLLGEGGFGCVYKG-WINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVN 179
K E ++G G FG V K W + VA+K + + + K ++ E+
Sbjct: 8 KEIEVEEVVGRGAFGVVCKAKWRAKD------------VAIKQIESESER--KAFIVELR 53
Query: 180 YLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPW---SIRMKIALD 236
L + HPN+VKL G C+ + LV E+ GSL N + + PLP+ + M L
Sbjct: 54 QLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYN-VLHGAEPLPYYTAAHAMSWCLQ 110
Query: 237 AAKGLAFLHEEAEKPVIYRDFKTSNILL-DGEYNAKLSDFGLAKDGPEGDKTHVSTRVMG 295
++G+A+LH K +I+RD K N+LL G K+ DFG A D +TH+ T G
Sbjct: 111 CSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACD----IQTHM-TNNKG 165
Query: 296 TYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWA-----RP 350
+ + APE + + K DV+S+G++L E++T R+ D+ G + WA RP
Sbjct: 166 SAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEI--GGPAFRIMWAVHNGTRP 223
Query: 351 QLGERRRFYRLIDPCLEGCFSIKGAEKTIQ-LAASCLNRDQKARPRMSEVVEALKPL 406
L IK K I+ L C ++D RP M E+V+ + L
Sbjct: 224 PL-------------------IKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHL 261
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 107/214 (50%), Gaps = 17/214 (7%)
Query: 129 LGEGGFGCVYKG-WINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHP 187
+G G FG V+ G W+N + VA+KT+ +G ++++ E + L HP
Sbjct: 16 IGSGQFGLVHLGYWLNKD-----------KVAIKTIR-EGAMSEEDFIEEAEVMMKLSHP 63
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEE 247
LV+L G C+E LV EFM G L ++L + + + LD +G+A+L E
Sbjct: 64 KLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 123
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
VI+RD N L+ K+SDFG+ + + D+ ST +A+PE
Sbjct: 124 C---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSF 179
Query: 308 GHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGE 341
++KSDV+SFGV++ E+ + + +NR N E
Sbjct: 180 SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 213
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 101/205 (49%), Gaps = 13/205 (6%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGH-KEWLAEVNYLGGLIH 186
++G G FGCVY +GT G + AVK+LN G ++L E + H
Sbjct: 36 VIGRGHFGCVY------HGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 89
Query: 187 PNLVKLIGCCIEDD-QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLH 245
PN++ L+G C+ + L+V +M G L N + + + L AKG+ +L
Sbjct: 90 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL- 148
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKD--GPEGDKTHVSTRVMGTYGYAAPE 303
A K ++RD N +LD ++ K++DFGLA+D E H T + A E
Sbjct: 149 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALE 206
Query: 304 YVMTGHLTAKSDVYSFGVVLLEMLT 328
+ T T KSDV+SFGV+L E++T
Sbjct: 207 SLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 99/204 (48%), Gaps = 13/204 (6%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG+G FG V M ++ TG VAVK L H + +++ E+ L L H N
Sbjct: 21 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 189 LVKLIGCCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHE 246
+VK G C +R L+ EF+P GSL +L + + ++ KG+ +L
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYL-- 133
Query: 247 EAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGT--YGYAAPEY 304
K I+RD T NIL++ E K+ DFGL K P+ DK + G + APE
Sbjct: 134 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 191
Query: 305 VMTGHLTAKSDVYSFGVVLLEMLT 328
+ + SDV+SFGVVL E+ T
Sbjct: 192 LTESKFSVASDVWSFGVVLYELFT 215
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 100/204 (49%), Gaps = 13/204 (6%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG+G FG V M ++ TG VAVK L H + +++ E+ L L H N
Sbjct: 18 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 189 LVKLIGCCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHE 246
+VK G C +R L+ E++P GSL ++L + + ++ KG+ +L
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 130
Query: 247 EAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGT--YGYAAPEY 304
K I+RD T NIL++ E K+ DFGL K P+ DK + G + APE
Sbjct: 131 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEFFKVKEPGESPIFWYAPES 188
Query: 305 VMTGHLTAKSDVYSFGVVLLEMLT 328
+ + SDV+SFGVVL E+ T
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFT 212
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 100/204 (49%), Gaps = 13/204 (6%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG+G FG V M ++ TG VAVK L H + +++ E+ L L H N
Sbjct: 17 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 71
Query: 189 LVKLIGCCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHE 246
+VK G C +R L+ E++P GSL ++L + + ++ KG+ +L
Sbjct: 72 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 129
Query: 247 EAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGT--YGYAAPEY 304
K I+RD T NIL++ E K+ DFGL K P+ DK + G + APE
Sbjct: 130 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 187
Query: 305 VMTGHLTAKSDVYSFGVVLLEMLT 328
+ + SDV+SFGVVL E+ T
Sbjct: 188 LTESKFSVASDVWSFGVVLYELFT 211
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 100/204 (49%), Gaps = 13/204 (6%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG+G FG V M ++ TG VAVK L H + +++ E+ L L H N
Sbjct: 21 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 189 LVKLIGCCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHE 246
+VK G C +R L+ E++P GSL ++L + + ++ KG+ +L
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 133
Query: 247 EAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGT--YGYAAPEY 304
K I+RD T NIL++ E K+ DFGL K P+ DK + G + APE
Sbjct: 134 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 191
Query: 305 VMTGHLTAKSDVYSFGVVLLEMLT 328
+ + SDV+SFGVVL E+ T
Sbjct: 192 LTESKFSVASDVWSFGVVLYELFT 215
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 100/204 (49%), Gaps = 13/204 (6%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG+G FG V M ++ TG VAVK L H + +++ E+ L L H N
Sbjct: 18 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 189 LVKLIGCCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHE 246
+VK G C +R L+ E++P GSL ++L + + ++ KG+ +L
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 130
Query: 247 EAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGT--YGYAAPEY 304
K I+RD T NIL++ E K+ DFGL K P+ DK + G + APE
Sbjct: 131 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 188
Query: 305 VMTGHLTAKSDVYSFGVVLLEMLT 328
+ + SDV+SFGVVL E+ T
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFT 212
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 100/204 (49%), Gaps = 13/204 (6%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG+G FG V M ++ TG VAVK L H + +++ E+ L L H N
Sbjct: 16 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 70
Query: 189 LVKLIGCCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHE 246
+VK G C +R L+ E++P GSL ++L + + ++ KG+ +L
Sbjct: 71 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 128
Query: 247 EAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGT--YGYAAPEY 304
K I+RD T NIL++ E K+ DFGL K P+ DK + G + APE
Sbjct: 129 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 186
Query: 305 VMTGHLTAKSDVYSFGVVLLEMLT 328
+ + SDV+SFGVVL E+ T
Sbjct: 187 LTESKFSVASDVWSFGVVLYELFT 210
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 100/204 (49%), Gaps = 13/204 (6%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG+G FG V M ++ TG VAVK L H + +++ E+ L L H N
Sbjct: 25 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 79
Query: 189 LVKLIGCCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHE 246
+VK G C +R L+ E++P GSL ++L + + ++ KG+ +L
Sbjct: 80 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 137
Query: 247 EAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGT--YGYAAPEY 304
K I+RD T NIL++ E K+ DFGL K P+ DK + G + APE
Sbjct: 138 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 195
Query: 305 VMTGHLTAKSDVYSFGVVLLEMLT 328
+ + SDV+SFGVVL E+ T
Sbjct: 196 LTESKFSVASDVWSFGVVLYELFT 219
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 100/204 (49%), Gaps = 13/204 (6%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG+G FG V M ++ TG VAVK L H + +++ E+ L L H N
Sbjct: 22 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 76
Query: 189 LVKLIGCCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHE 246
+VK G C +R L+ E++P GSL ++L + + ++ KG+ +L
Sbjct: 77 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 134
Query: 247 EAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGT--YGYAAPEY 304
K I+RD T NIL++ E K+ DFGL K P+ DK + G + APE
Sbjct: 135 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 192
Query: 305 VMTGHLTAKSDVYSFGVVLLEMLT 328
+ + SDV+SFGVVL E+ T
Sbjct: 193 LTESKFSVASDVWSFGVVLYELFT 216
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 100/204 (49%), Gaps = 13/204 (6%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG+G FG V M ++ TG VAVK L H + +++ E+ L L H N
Sbjct: 49 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 103
Query: 189 LVKLIGCCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHE 246
+VK G C +R L+ E++P GSL ++L + + ++ KG+ +L
Sbjct: 104 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 161
Query: 247 EAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGT--YGYAAPEY 304
K I+RD T NIL++ E K+ DFGL K P+ DK + G + APE
Sbjct: 162 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 219
Query: 305 VMTGHLTAKSDVYSFGVVLLEMLT 328
+ + SDV+SFGVVL E+ T
Sbjct: 220 LTESKFSVASDVWSFGVVLYELFT 243
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 100/204 (49%), Gaps = 13/204 (6%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG+G FG V M ++ TG VAVK L H + +++ E+ L L H N
Sbjct: 23 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 77
Query: 189 LVKLIGCCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHE 246
+VK G C +R L+ E++P GSL ++L + + ++ KG+ +L
Sbjct: 78 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 135
Query: 247 EAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGT--YGYAAPEY 304
K I+RD T NIL++ E K+ DFGL K P+ DK + G + APE
Sbjct: 136 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 193
Query: 305 VMTGHLTAKSDVYSFGVVLLEMLT 328
+ + SDV+SFGVVL E+ T
Sbjct: 194 LTESKFSVASDVWSFGVVLYELFT 217
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 100/204 (49%), Gaps = 13/204 (6%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG+G FG V M ++ TG VAVK L H + +++ E+ L L H N
Sbjct: 18 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 189 LVKLIGCCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHE 246
+VK G C +R L+ E++P GSL ++L + + ++ KG+ +L
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 130
Query: 247 EAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGT--YGYAAPEY 304
K I+RD T NIL++ E K+ DFGL K P+ DK + G + APE
Sbjct: 131 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 188
Query: 305 VMTGHLTAKSDVYSFGVVLLEMLT 328
+ + SDV+SFGVVL E+ T
Sbjct: 189 LTESKFSVASDVWSFGVVLYELFT 212
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 100/204 (49%), Gaps = 13/204 (6%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG+G FG V M ++ TG VAVK L H + +++ E+ L L H N
Sbjct: 36 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 90
Query: 189 LVKLIGCCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHE 246
+VK G C +R L+ E++P GSL ++L + + ++ KG+ +L
Sbjct: 91 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 148
Query: 247 EAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGT--YGYAAPEY 304
K I+RD T NIL++ E K+ DFGL K P+ DK + G + APE
Sbjct: 149 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 206
Query: 305 VMTGHLTAKSDVYSFGVVLLEMLT 328
+ + SDV+SFGVVL E+ T
Sbjct: 207 LTESKFSVASDVWSFGVVLYELFT 230
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 100/204 (49%), Gaps = 13/204 (6%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG+G FG V M ++ TG VAVK L H + +++ E+ L L H N
Sbjct: 24 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 78
Query: 189 LVKLIGCCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHE 246
+VK G C +R L+ E++P GSL ++L + + ++ KG+ +L
Sbjct: 79 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 136
Query: 247 EAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGT--YGYAAPEY 304
K I+RD T NIL++ E K+ DFGL K P+ DK + G + APE
Sbjct: 137 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 194
Query: 305 VMTGHLTAKSDVYSFGVVLLEMLT 328
+ + SDV+SFGVVL E+ T
Sbjct: 195 LTESKFSVASDVWSFGVVLYELFT 218
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 100/204 (49%), Gaps = 13/204 (6%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG+G FG V M ++ TG VAVK L H + +++ E+ L L H N
Sbjct: 36 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 90
Query: 189 LVKLIGCCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHE 246
+VK G C +R L+ E++P GSL ++L + + ++ KG+ +L
Sbjct: 91 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 148
Query: 247 EAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGT--YGYAAPEY 304
K I+RD T NIL++ E K+ DFGL K P+ DK + G + APE
Sbjct: 149 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 206
Query: 305 VMTGHLTAKSDVYSFGVVLLEMLT 328
+ + SDV+SFGVVL E+ T
Sbjct: 207 LTESKFSVASDVWSFGVVLYELFT 230
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 101/205 (49%), Gaps = 13/205 (6%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGH-KEWLAEVNYLGGLIH 186
++G G FGCVY +GT G + AVK+LN G ++L E + H
Sbjct: 37 VIGRGHFGCVY------HGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 90
Query: 187 PNLVKLIGCCIEDD-QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLH 245
PN++ L+G C+ + L+V +M G L N + + + L AKG+ +L
Sbjct: 91 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL- 149
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKD--GPEGDKTHVSTRVMGTYGYAAPE 303
A K ++RD N +LD ++ K++DFGLA+D E H T + A E
Sbjct: 150 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 207
Query: 304 YVMTGHLTAKSDVYSFGVVLLEMLT 328
+ T T KSDV+SFGV+L E++T
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 101/205 (49%), Gaps = 13/205 (6%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGH-KEWLAEVNYLGGLIH 186
++G G FGCVY +GT G + AVK+LN G ++L E + H
Sbjct: 55 VIGRGHFGCVY------HGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 108
Query: 187 PNLVKLIGCCIEDD-QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLH 245
PN++ L+G C+ + L+V +M G L N + + + L AKG+ +L
Sbjct: 109 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL- 167
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKD--GPEGDKTHVSTRVMGTYGYAAPE 303
A K ++RD N +LD ++ K++DFGLA+D E H T + A E
Sbjct: 168 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 225
Query: 304 YVMTGHLTAKSDVYSFGVVLLEMLT 328
+ T T KSDV+SFGV+L E++T
Sbjct: 226 SLQTQKFTTKSDVWSFGVLLWELMT 250
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 101/205 (49%), Gaps = 13/205 (6%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGH-KEWLAEVNYLGGLIH 186
++G G FGCVY +GT G + AVK+LN G ++L E + H
Sbjct: 35 VIGRGHFGCVY------HGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 88
Query: 187 PNLVKLIGCCIEDD-QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLH 245
PN++ L+G C+ + L+V +M G L N + + + L AKG+ +L
Sbjct: 89 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL- 147
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKD--GPEGDKTHVSTRVMGTYGYAAPE 303
A K ++RD N +LD ++ K++DFGLA+D E H T + A E
Sbjct: 148 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 205
Query: 304 YVMTGHLTAKSDVYSFGVVLLEMLT 328
+ T T KSDV+SFGV+L E++T
Sbjct: 206 SLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 101/205 (49%), Gaps = 13/205 (6%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGH-KEWLAEVNYLGGLIH 186
++G G FGCVY +GT G + AVK+LN G ++L E + H
Sbjct: 34 VIGRGHFGCVY------HGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 87
Query: 187 PNLVKLIGCCIEDD-QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLH 245
PN++ L+G C+ + L+V +M G L N + + + L AKG+ +L
Sbjct: 88 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL- 146
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKD--GPEGDKTHVSTRVMGTYGYAAPE 303
A K ++RD N +LD ++ K++DFGLA+D E H T + A E
Sbjct: 147 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 204
Query: 304 YVMTGHLTAKSDVYSFGVVLLEMLT 328
+ T T KSDV+SFGV+L E++T
Sbjct: 205 SLQTQKFTTKSDVWSFGVLLWELMT 229
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 101/205 (49%), Gaps = 13/205 (6%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGH-KEWLAEVNYLGGLIH 186
++G G FGCVY +GT G + AVK+LN G ++L E + H
Sbjct: 32 VIGRGHFGCVY------HGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 85
Query: 187 PNLVKLIGCCIEDD-QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLH 245
PN++ L+G C+ + L+V +M G L N + + + L AKG+ +L
Sbjct: 86 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL- 144
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKD--GPEGDKTHVSTRVMGTYGYAAPE 303
A K ++RD N +LD ++ K++DFGLA+D E H T + A E
Sbjct: 145 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 202
Query: 304 YVMTGHLTAKSDVYSFGVVLLEMLT 328
+ T T KSDV+SFGV+L E++T
Sbjct: 203 SLQTQKFTTKSDVWSFGVLLWELMT 227
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 101/205 (49%), Gaps = 13/205 (6%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGH-KEWLAEVNYLGGLIH 186
++G G FGCVY +GT G + AVK+LN G ++L E + H
Sbjct: 36 VIGRGHFGCVY------HGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 89
Query: 187 PNLVKLIGCCIEDD-QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLH 245
PN++ L+G C+ + L+V +M G L N + + + L AKG+ +L
Sbjct: 90 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL- 148
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKD--GPEGDKTHVSTRVMGTYGYAAPE 303
A K ++RD N +LD ++ K++DFGLA+D E H T + A E
Sbjct: 149 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 206
Query: 304 YVMTGHLTAKSDVYSFGVVLLEMLT 328
+ T T KSDV+SFGV+L E++T
Sbjct: 207 SLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 101/205 (49%), Gaps = 13/205 (6%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGH-KEWLAEVNYLGGLIH 186
++G G FGCVY +GT G + AVK+LN G ++L E + H
Sbjct: 37 VIGRGHFGCVY------HGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 90
Query: 187 PNLVKLIGCCIEDD-QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLH 245
PN++ L+G C+ + L+V +M G L N + + + L AKG+ +L
Sbjct: 91 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL- 149
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKD--GPEGDKTHVSTRVMGTYGYAAPE 303
A K ++RD N +LD ++ K++DFGLA+D E H T + A E
Sbjct: 150 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 207
Query: 304 YVMTGHLTAKSDVYSFGVVLLEMLT 328
+ T T KSDV+SFGV+L E++T
Sbjct: 208 SLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/204 (32%), Positives = 101/204 (49%), Gaps = 13/204 (6%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG+G FG V M ++ TG VAVK L H + +++ E+ L L H N
Sbjct: 19 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 73
Query: 189 LVKLIGCCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHE 246
+VK G C +R L+ E++P GSL ++L + + ++ KG+ +L
Sbjct: 74 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL-- 131
Query: 247 EAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGT--YGYAAPEY 304
K I+R+ T NIL++ E K+ DFGL K P+ DK + + G + APE
Sbjct: 132 -GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQ-DKEYYKVKEPGESPIFWYAPES 189
Query: 305 VMTGHLTAKSDVYSFGVVLLEMLT 328
+ + SDV+SFGVVL E+ T
Sbjct: 190 LTESKFSVASDVWSFGVVLYELFT 213
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 101/205 (49%), Gaps = 13/205 (6%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGH-KEWLAEVNYLGGLIH 186
++G G FGCVY +GT G + AVK+LN G ++L E + H
Sbjct: 56 VIGRGHFGCVY------HGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 109
Query: 187 PNLVKLIGCCIEDD-QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLH 245
PN++ L+G C+ + L+V +M G L N + + + L AKG+ +L
Sbjct: 110 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL- 168
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKD--GPEGDKTHVSTRVMGTYGYAAPE 303
A K ++RD N +LD ++ K++DFGLA+D E H T + A E
Sbjct: 169 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 226
Query: 304 YVMTGHLTAKSDVYSFGVVLLEMLT 328
+ T T KSDV+SFGV+L E++T
Sbjct: 227 SLQTQKFTTKSDVWSFGVLLWELMT 251
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 101/205 (49%), Gaps = 13/205 (6%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGH-KEWLAEVNYLGGLIH 186
++G G FGCVY +GT G + AVK+LN G ++L E + H
Sbjct: 29 VIGRGHFGCVY------HGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSH 82
Query: 187 PNLVKLIGCCIEDD-QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLH 245
PN++ L+G C+ + L+V +M G L N + + + L AKG+ +L
Sbjct: 83 PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL- 141
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKD--GPEGDKTHVSTRVMGTYGYAAPE 303
A K ++RD N +LD ++ K++DFGLA+D E H T + A E
Sbjct: 142 --ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 199
Query: 304 YVMTGHLTAKSDVYSFGVVLLEMLT 328
+ T T KSDV+SFGV+L E++T
Sbjct: 200 SLQTQKFTTKSDVWSFGVLLWELMT 224
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 100/204 (49%), Gaps = 13/204 (6%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG+G FG V M ++ TG VAVK L H + +++ E+ L L H N
Sbjct: 21 LGKGNFGSV-----EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 189 LVKLIGCCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHE 246
+VK G C +R L+ E++P GSL ++L + + ++ KG+ +L
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYL-- 133
Query: 247 EAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGT--YGYAAPEY 304
K I+RD T NIL++ E K+ DFGL K P+ DK + G + APE
Sbjct: 134 -GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ-DKEXXKVKEPGESPIFWYAPES 191
Query: 305 VMTGHLTAKSDVYSFGVVLLEMLT 328
+ + SDV+SFGVVL E+ T
Sbjct: 192 LTESKFSVASDVWSFGVVLYELFT 215
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 102/204 (50%), Gaps = 14/204 (6%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHD-GLQGHKEWLAEVNYLGGLIHP 187
LGEG FG V ++ GTG VAVK L G Q W E+ L L H
Sbjct: 17 LGEGHFGKV-----SLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHE 71
Query: 188 NLVKLIGCCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLH 245
++VK GCC + ++ LV E++P GSL ++L R + L + + A +G+A+LH
Sbjct: 72 HIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGL--AQLLLFAQQICEGMAYLH 129
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTH-VSTRVMGTYGYAAPEY 304
+ I+R N+LLD + K+ DFGLAK PEG + + V + APE
Sbjct: 130 AQH---YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPEC 186
Query: 305 VMTGHLTAKSDVYSFGVVLLEMLT 328
+ SDV+SFGV L E+LT
Sbjct: 187 LKECKFYYASDVWSFGVTLYELLT 210
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 111/224 (49%), Gaps = 19/224 (8%)
Query: 107 QLRKFSFNELKSATKSFRPECLLGEGGFGCVYKG-WINMNGTATVKPGTGLPVAVKTLNH 165
QLR ELK +LG G FG VYKG W+ T + PVA+K LN
Sbjct: 31 QLRILKETELKRVK-------VLGSGAFGTVYKGIWVPEGETVKI------PVAIKILNE 77
Query: 166 D-GLQGHKEWLAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP 224
G + + E++ E + + HP+LV+L+G C+ +L V + MP G L ++
Sbjct: 78 TTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDN 136
Query: 225 LPWSIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEG 284
+ + + + AKG+ +L E + +++RD N+L+ + K++DFGLA+
Sbjct: 137 IGSQLLLNWCVQIAKGMMYLEE---RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGD 193
Query: 285 DKTHVSTRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+K + + + A E + T +SDV+S+GV + E++T
Sbjct: 194 EKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 102/204 (50%), Gaps = 14/204 (6%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHD-GLQGHKEWLAEVNYLGGLIHP 187
LGEG FG V ++ GTG VAVK L G Q W E+ L L H
Sbjct: 16 LGEGHFGKV-----SLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHE 70
Query: 188 NLVKLIGCCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLH 245
++VK GCC + ++ LV E++P GSL ++L R + L + + A +G+A+LH
Sbjct: 71 HIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGL--AQLLLFAQQICEGMAYLH 128
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTH-VSTRVMGTYGYAAPEY 304
+ I+R N+LLD + K+ DFGLAK PEG + + V + APE
Sbjct: 129 AQH---YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPEC 185
Query: 305 VMTGHLTAKSDVYSFGVVLLEMLT 328
+ SDV+SFGV L E+LT
Sbjct: 186 LKECKFYYASDVWSFGVTLYELLT 209
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 111/224 (49%), Gaps = 19/224 (8%)
Query: 107 QLRKFSFNELKSATKSFRPECLLGEGGFGCVYKG-WINMNGTATVKPGTGLPVAVKTLNH 165
QLR ELK +LG G FG VYKG W+ T + PVA+K LN
Sbjct: 8 QLRILKETELKRVK-------VLGSGAFGTVYKGIWVPEGETVKI------PVAIKILNE 54
Query: 166 D-GLQGHKEWLAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP 224
G + + E++ E + + HP+LV+L+G C+ +L V + MP G L ++
Sbjct: 55 TTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDN 113
Query: 225 LPWSIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEG 284
+ + + + AKG+ +L E + +++RD N+L+ + K++DFGLA+
Sbjct: 114 IGSQLLLNWCVQIAKGMMYLEE---RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGD 170
Query: 285 DKTHVSTRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+K + + + A E + T +SDV+S+GV + E++T
Sbjct: 171 EKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 130/280 (46%), Gaps = 33/280 (11%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG G FG VY+G V L VAVKTL D ++ +E+L E + + HPN
Sbjct: 19 LGGGQFGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 68
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALDAAKGLAFLHEE 247
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 69 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE-- 126
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
+K I+RD N L+ + K++DFGL++ GD + APE +
Sbjct: 127 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPESLAY 184
Query: 308 GHLTAKSDVYSFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPQLGERRRFYRLIDPCL 366
+ KSDV++FGV+L E+ T G P+ + L+E + YR+ P
Sbjct: 185 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLE----------KDYRMERP-- 232
Query: 367 EGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPL 406
EGC EK +L +C + RP +E+ +A + +
Sbjct: 233 EGC-----PEKVYELMRACWQWNPSDRPSFAEIHQAFETM 267
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 105/210 (50%), Gaps = 21/210 (10%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDG-LQGHKEWLAEVNYLGGLIHP 187
LG+G FG VY+G N +K VAVKT+N L+ E+L E + + G
Sbjct: 22 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 77
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSL-----------PLPWSIRMKIALD 236
++V+L+G + L+V E M G L+++L RSL P +++A +
Sbjct: 78 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYL--RSLRPEAENNPGRPPPTLQEMIQMAAE 135
Query: 237 AAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 296
A G+A+L+ K ++RD N ++ ++ K+ DFG+ +D E D + +
Sbjct: 136 IADGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLP 192
Query: 297 YGYAAPEYVMTGHLTAKSDVYSFGVVLLEM 326
+ APE + G T SD++SFGVVL E+
Sbjct: 193 VRWMAPESLKDGVFTTSSDMWSFGVVLWEI 222
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 102/206 (49%), Gaps = 16/206 (7%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGH-KEWLAEVNYLGGLIHP 187
LGEG FG V + G TG VAVK+L + H + E+ L L H
Sbjct: 29 LGEGHFGKVELCRYDPEGD-----NTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHE 83
Query: 188 NLVKLIGCCIED--DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLH 245
N+VK G C ED + L+ EF+P GSL+ +L + + ++K A+ KG+ +L
Sbjct: 84 NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYL- 142
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDK---THVSTRVMGTYGYAAP 302
+ ++RD N+L++ E+ K+ DFGL K E DK T R + Y AP
Sbjct: 143 --GSRQYVHRDLAARNVLVESEHQVKIGDFGLTK-AIETDKEXXTVKDDRDSPVFWY-AP 198
Query: 303 EYVMTGHLTAKSDVYSFGVVLLEMLT 328
E +M SDV+SFGV L E+LT
Sbjct: 199 ECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 105/210 (50%), Gaps = 21/210 (10%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDG-LQGHKEWLAEVNYLGGLIHP 187
LG+G FG VY+G N +K VAVKT+N L+ E+L E + + G
Sbjct: 25 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSL-----------PLPWSIRMKIALD 236
++V+L+G + L+V E M G L+++L RSL P +++A +
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYL--RSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 237 AAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 296
A G+A+L+ K ++RD N ++ ++ K+ DFG+ +D E D + +
Sbjct: 139 IADGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLP 195
Query: 297 YGYAAPEYVMTGHLTAKSDVYSFGVVLLEM 326
+ APE + G T SD++SFGVVL E+
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 105/210 (50%), Gaps = 21/210 (10%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDG-LQGHKEWLAEVNYLGGLIHP 187
LG+G FG VY+G N +K VAVKT+N L+ E+L E + + G
Sbjct: 25 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSL-----------PLPWSIRMKIALD 236
++V+L+G + L+V E M G L+++L RSL P +++A +
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYL--RSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 237 AAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 296
A G+A+L+ K ++RD N ++ ++ K+ DFG+ +D E D + +
Sbjct: 139 IADGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLP 195
Query: 297 YGYAAPEYVMTGHLTAKSDVYSFGVVLLEM 326
+ APE + G T SD++SFGVVL E+
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 130/280 (46%), Gaps = 33/280 (11%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG G +G VY+G V L VAVKTL D ++ +E+L E + + HPN
Sbjct: 19 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 68
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALDAAKGLAFLHEE 247
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 69 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE-- 126
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
+K I+RD N L+ + K++DFGL++ GD + APE +
Sbjct: 127 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPESLAY 184
Query: 308 GHLTAKSDVYSFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPQLGERRRFYRLIDPCL 366
+ KSDV++FGV+L E+ T G P+ + L+E + YR+ P
Sbjct: 185 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLE----------KDYRMERP-- 232
Query: 367 EGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPL 406
EGC EK +L +C + RP +E+ +A + +
Sbjct: 233 EGC-----PEKVYELMRACWQWNPSDRPSFAEIHQAFETM 267
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/206 (34%), Positives = 102/206 (49%), Gaps = 16/206 (7%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGH-KEWLAEVNYLGGLIHP 187
LGEG FG V + G TG VAVK+L + H + E+ L L H
Sbjct: 17 LGEGHFGKVELCRYDPEGD-----NTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHE 71
Query: 188 NLVKLIGCCIED--DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLH 245
N+VK G C ED + L+ EF+P GSL+ +L + + ++K A+ KG+ +L
Sbjct: 72 NIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYL- 130
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVST---RVMGTYGYAAP 302
+ ++RD N+L++ E+ K+ DFGL K E DK + R + Y AP
Sbjct: 131 --GSRQYVHRDLAARNVLVESEHQVKIGDFGLTK-AIETDKEXXTVKDDRDSPVFWY-AP 186
Query: 303 EYVMTGHLTAKSDVYSFGVVLLEMLT 328
E +M SDV+SFGV L E+LT
Sbjct: 187 ECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 130/280 (46%), Gaps = 33/280 (11%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG G +G VY+G V L VAVKTL D ++ +E+L E + + HPN
Sbjct: 19 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 68
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALDAAKGLAFLHEE 247
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 69 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE-- 126
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
+K I+RD N L+ + K++DFGL++ GD + APE +
Sbjct: 127 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTFTAHAGAKFPIKWTAPESLAY 184
Query: 308 GHLTAKSDVYSFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPQLGERRRFYRLIDPCL 366
+ KSDV++FGV+L E+ T G P+ + L+E + YR+ P
Sbjct: 185 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLE----------KDYRMERP-- 232
Query: 367 EGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPL 406
EGC EK +L +C + RP +E+ +A + +
Sbjct: 233 EGC-----PEKVYELMRACWQWNPSDRPSFAEIHQAFETM 267
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 97/214 (45%), Gaps = 23/214 (10%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTG-LPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHP 187
LGEG FG V+ + + P + VAVKTL K++ E L L H
Sbjct: 21 LGEGAFGKVF-----LAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHE 75
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP-------------LPWSIRMKIA 234
++VK G C+E D ++V+E+M G L N R P L S + IA
Sbjct: 76 HIVKFYGVCVEGDPLIMVFEYMKHGDL-NKFLRAHGPDAVLMAEGNPPTELTQSQMLHIA 134
Query: 235 LDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVM 294
A G+ +L A + ++RD T N L+ K+ DFG+++D D V M
Sbjct: 135 QQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTM 191
Query: 295 GTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ PE +M T +SDV+S GVVL E+ T
Sbjct: 192 LPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFT 225
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 130/287 (45%), Gaps = 35/287 (12%)
Query: 126 ECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHK-EWLAEVNYLGGL 184
E ++G G G V G + + G V PVA+K L + + ++L+E + +G
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDV------PVAIKALKAGYTERQRRDFLSEASIMGQF 107
Query: 185 IHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL--DAAKGLA 242
HPN+++L G ++V E+M GSL+ F R+ ++I + + G+
Sbjct: 108 DHPNIIRLEGVVTRGRLAMIVTEYMENGSLDT--FLRTHDGQFTIMQLVGMLRGVGAGMR 165
Query: 243 FLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAK---DGPEGDKTHVSTRVMGTYGY 299
+L ++ ++RD N+L+D K+SDFGL++ D P+ T ++ +
Sbjct: 166 YL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKI--PIRW 220
Query: 300 AAPEYVMTGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPQLGERRRFY 359
APE + ++ SDV+SFGVV+ E+L N N R + Y
Sbjct: 221 TAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN---------RDVISSVEEGY 271
Query: 360 RLIDPCLEGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPL 406
RL P GC QL C ++D+ RPR S++V L L
Sbjct: 272 RL--PAPMGC-----PHALHQLMLDCWHKDRAQRPRFSQIVSVLDAL 311
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 130/287 (45%), Gaps = 35/287 (12%)
Query: 126 ECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHK-EWLAEVNYLGGL 184
E ++G G G V G + + G V PVA+K L + + ++L+E + +G
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDV------PVAIKALKAGYTERQRRDFLSEASIMGQF 107
Query: 185 IHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL--DAAKGLA 242
HPN+++L G ++V E+M GSL+ F R+ ++I + + G+
Sbjct: 108 DHPNIIRLEGVVTRGRLAMIVTEYMENGSLDT--FLRTHDGQFTIMQLVGMLRGVGAGMR 165
Query: 243 FLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAK---DGPEGDKTHVSTRVMGTYGY 299
+L ++ ++RD N+L+D K+SDFGL++ D P+ T ++ +
Sbjct: 166 YL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKI--PIRW 220
Query: 300 AAPEYVMTGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPQLGERRRFY 359
APE + ++ SDV+SFGVV+ E+L N N R + Y
Sbjct: 221 TAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN---------RDVISSVEEGY 271
Query: 360 RLIDPCLEGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPL 406
RL P GC QL C ++D+ RPR S++V L L
Sbjct: 272 RL--PAPMGC-----PHALHQLMLDCWHKDRAQRPRFSQIVSVLDAL 311
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 105/210 (50%), Gaps = 21/210 (10%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDG-LQGHKEWLAEVNYLGGLIHP 187
LG+G FG VY+G N +K VAVKT+N L+ E+L E + + G
Sbjct: 24 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 79
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSL-----------PLPWSIRMKIALD 236
++V+L+G + L+V E M G L+++L RSL P +++A +
Sbjct: 80 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYL--RSLRPEAENNPGRPPPTLQEMIQMAAE 137
Query: 237 AAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 296
A G+A+L+ K ++RD N ++ ++ K+ DFG+ +D E D + +
Sbjct: 138 IADGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 194
Query: 297 YGYAAPEYVMTGHLTAKSDVYSFGVVLLEM 326
+ APE + G T SD++SFGVVL E+
Sbjct: 195 VRWMAPESLKDGVFTTSSDMWSFGVVLWEI 224
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 105/210 (50%), Gaps = 21/210 (10%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDG-LQGHKEWLAEVNYLGGLIHP 187
LG+G FG VY+G N +K VAVKT+N L+ E+L E + + G
Sbjct: 25 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSL-----------PLPWSIRMKIALD 236
++V+L+G + L+V E M G L+++L RSL P +++A +
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYL--RSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 237 AAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 296
A G+A+L+ K ++RD N ++ ++ K+ DFG+ +D E D + +
Sbjct: 139 IADGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 195
Query: 297 YGYAAPEYVMTGHLTAKSDVYSFGVVLLEM 326
+ APE + G T SD++SFGVVL E+
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 98/217 (45%), Gaps = 26/217 (11%)
Query: 129 LGEGGFGCVYKG-WINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHP 187
LGEG FG V+ N++ T + VAVK L L K++ E L L H
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKD-----KMLVAVKALKDPTLAARKDFQREAELLTNLQHE 77
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP----------------LPWSIRM 231
++VK G C + D ++V+E+M G L N R P L S +
Sbjct: 78 HIVKFYGVCGDGDPLIMVFEYMKHGDL-NKFLRAHGPDAMILVDGQPRQAKGELGLSQML 136
Query: 232 KIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVST 291
IA A G+ +L A + ++RD T N L+ K+ DFG+++D D V
Sbjct: 137 HIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGG 193
Query: 292 RVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
M + PE +M T +SDV+SFGV+L E+ T
Sbjct: 194 HTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 107/232 (46%), Gaps = 32/232 (13%)
Query: 121 KSFRPECL-----LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWL 175
+ FRP L LG+G FG TG + +K L + + +L
Sbjct: 5 RIFRPSDLIHGEVLGKGCFG---------QAIKVTHRETGEVMVMKELIRFDEETQRTFL 55
Query: 176 AEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 235
EV + L HPN++K IG +D + + E++ G+L + PWS R+ A
Sbjct: 56 KEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAK 115
Query: 236 DAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLA------KDGPEG----- 284
D A G+A+LH +I+RD + N L+ N ++DFGLA K PEG
Sbjct: 116 DIASGMAYLHSMN---IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLK 172
Query: 285 --DKTHVSTRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTGRRSMD 334
D+ T V+G + APE + K DV+SFG+VL E++ GR + D
Sbjct: 173 KPDRKKRYT-VVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII-GRVNAD 222
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 101/213 (47%), Gaps = 21/213 (9%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHK--EWLAEVNYLGGLI 185
+LGEG FG V M G + GT L VAVKT+ D + E+L+E +
Sbjct: 41 ILGEGEFGSV------MEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFS 94
Query: 186 HPNLVKLIGCCIEDDQR-----LLVYEFMPRGSLENHLFRRSLP-----LPWSIRMKIAL 235
HPN+++L+G CIE + +++ FM G L +L L +P +K +
Sbjct: 95 HPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMV 154
Query: 236 DAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMG 295
D A G+ +L + + ++RD N +L + ++DFGL+K GD
Sbjct: 155 DIALGMEYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKM 211
Query: 296 TYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ A E + T+KSDV++FGV + E+ T
Sbjct: 212 PVKWIAIESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 105/210 (50%), Gaps = 21/210 (10%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDG-LQGHKEWLAEVNYLGGLIHP 187
LG+G FG VY+G N +K VAVKT+N L+ E+L E + + G
Sbjct: 26 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 81
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSL-----------PLPWSIRMKIALD 236
++V+L+G + L+V E M G L+++L RSL P +++A +
Sbjct: 82 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYL--RSLRPEAENNPGRPPPTLQEMIQMAAE 139
Query: 237 AAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 296
A G+A+L+ K ++R+ N ++ ++ K+ DFG+ +D E D + +
Sbjct: 140 IADGMAYLNA---KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 196
Query: 297 YGYAAPEYVMTGHLTAKSDVYSFGVVLLEM 326
+ APE + G T SD++SFGVVL E+
Sbjct: 197 VRWMAPESLKDGVFTTSSDMWSFGVVLWEI 226
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 105/210 (50%), Gaps = 21/210 (10%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDG-LQGHKEWLAEVNYLGGLIHP 187
LG+G FG VY+G N +K VAVKT+N L+ E+L E + + G
Sbjct: 25 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSL-----------PLPWSIRMKIALD 236
++V+L+G + L+V E M G L+++L RSL P +++A +
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYL--RSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 237 AAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 296
A G+A+L+ K ++R+ N ++ ++ K+ DFG+ +D E D + +
Sbjct: 139 IADGMAYLNA---KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 195
Query: 297 YGYAAPEYVMTGHLTAKSDVYSFGVVLLEM 326
+ APE + G T SD++SFGVVL E+
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 129/280 (46%), Gaps = 33/280 (11%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG G +G VY+G V L VAVKTL D ++ +E+L E + + HPN
Sbjct: 22 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 71
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALDAAKGLAFLHEE 247
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 72 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 129
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
+K I+RD N L+ + K++DFGL++ GD + APE +
Sbjct: 130 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPESLAY 187
Query: 308 GHLTAKSDVYSFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPQLGERRRFYRLIDPCL 366
+ KSDV++FGV+L E+ T G + + L+E + YR+ P
Sbjct: 188 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE----------KDYRMERP-- 235
Query: 367 EGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPL 406
EGC EK +L +C + RP +E+ +A + +
Sbjct: 236 EGC-----PEKVYELMRACWQWNPSDRPSFAEIHQAFETM 270
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 129/280 (46%), Gaps = 33/280 (11%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG G +G VY+G V L VAVKTL D ++ +E+L E + + HPN
Sbjct: 26 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 75
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALDAAKGLAFLHEE 247
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE-- 133
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
+K I+RD N L+ + K++DFGL++ GD + APE +
Sbjct: 134 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAY 191
Query: 308 GHLTAKSDVYSFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPQLGERRRFYRLIDPCL 366
+ KSDV++FGV+L E+ T G + + L+E + YR+ P
Sbjct: 192 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE----------KDYRMERP-- 239
Query: 367 EGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPL 406
EGC EK +L +C + RP +E+ +A + +
Sbjct: 240 EGC-----PEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 129/280 (46%), Gaps = 33/280 (11%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG G +G VY+G V L VAVKTL D ++ +E+L E + + HPN
Sbjct: 21 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 70
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALDAAKGLAFLHEE 247
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 71 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE-- 128
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
+K I+RD N L+ + K++DFGL++ GD + APE +
Sbjct: 129 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAY 186
Query: 308 GHLTAKSDVYSFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPQLGERRRFYRLIDPCL 366
+ KSDV++FGV+L E+ T G + + L+E + YR+ P
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE----------KDYRMERP-- 234
Query: 367 EGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPL 406
EGC EK +L +C + RP +E+ +A + +
Sbjct: 235 EGC-----PEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 129/280 (46%), Gaps = 33/280 (11%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG G +G VY+G V L VAVKTL D ++ +E+L E + + HPN
Sbjct: 21 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 70
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALDAAKGLAFLHEE 247
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 71 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE-- 128
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
+K I+RD N L+ + K++DFGL++ GD + APE +
Sbjct: 129 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAY 186
Query: 308 GHLTAKSDVYSFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPQLGERRRFYRLIDPCL 366
+ KSDV++FGV+L E+ T G + + L+E + YR+ P
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE----------KDYRMERP-- 234
Query: 367 EGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPL 406
EGC EK +L +C + RP +E+ +A + +
Sbjct: 235 EGC-----PEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 129/280 (46%), Gaps = 33/280 (11%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG G +G VY+G V L VAVKTL D ++ +E+L E + + HPN
Sbjct: 26 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 75
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALDAAKGLAFLHEE 247
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 133
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
+K I+RD N L+ + K++DFGL++ GD + APE +
Sbjct: 134 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPESLAY 191
Query: 308 GHLTAKSDVYSFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPQLGERRRFYRLIDPCL 366
+ KSDV++FGV+L E+ T G + + L+E + YR+ P
Sbjct: 192 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE----------KDYRMERP-- 239
Query: 367 EGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPL 406
EGC EK +L +C + RP +E+ +A + +
Sbjct: 240 EGC-----PEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 129/280 (46%), Gaps = 33/280 (11%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG G +G VY+G V L VAVKTL D ++ +E+L E + + HPN
Sbjct: 21 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 70
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALDAAKGLAFLHEE 247
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE-- 128
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
+K I+RD N L+ + K++DFGL++ GD + APE +
Sbjct: 129 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAY 186
Query: 308 GHLTAKSDVYSFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPQLGERRRFYRLIDPCL 366
+ KSDV++FGV+L E+ T G + + L+E + YR+ P
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE----------KDYRMERP-- 234
Query: 367 EGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPL 406
EGC EK +L +C + RP +E+ +A + +
Sbjct: 235 EGC-----PEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 129/280 (46%), Gaps = 33/280 (11%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG G +G VY+G V L VAVKTL D ++ +E+L E + + HPN
Sbjct: 21 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 70
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALDAAKGLAFLHEE 247
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE-- 128
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
+K I+RD N L+ + K++DFGL++ GD + APE +
Sbjct: 129 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAY 186
Query: 308 GHLTAKSDVYSFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPQLGERRRFYRLIDPCL 366
+ KSDV++FGV+L E+ T G + + L+E + YR+ P
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE----------KDYRMERP-- 234
Query: 367 EGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPL 406
EGC EK +L +C + RP +E+ +A + +
Sbjct: 235 EGC-----PEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 135/300 (45%), Gaps = 43/300 (14%)
Query: 121 KSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNY 180
+S R E LG+G FG V+ G NGT V A+KTL G + +L E
Sbjct: 18 ESLRLEVKLGQGCFGEVWMG--TWNGTTRV--------AIKTLK-PGTMSPEAFLQEAQV 66
Query: 181 LGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHL---FRRSLPLPWSIRMKIALDA 237
+ L H LV+L + ++ +V E+M +GSL + L + L LP + M A
Sbjct: 67 MKKLRHEKLVQLYAV-VSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDM--AAQI 123
Query: 238 AKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY 297
A G+A++ ++RD + +NIL+ K++DFGLA+ + + T
Sbjct: 124 ASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXT-ARQGAKFPI 179
Query: 298 GYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPQLGERRR 357
+ APE + G T KSDV+SFG++L E+ T R N R L + R
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN---------REVLDQVER 230
Query: 358 FYRLIDPCLEGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPLPYLKDMASSSS 417
YR+ PC C E L C +D + RP E ++A +L+D +S+
Sbjct: 231 GYRM--PCPPEC-----PESLHDLMCQCWRKDPEERPTF-EYLQA-----FLEDYFTSTE 277
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 129/280 (46%), Gaps = 33/280 (11%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG G +G VY+G V L VAVKTL D ++ +E+L E + + HPN
Sbjct: 26 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 75
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALDAAKGLAFLHEE 247
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 76 LVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 133
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
+K I+RD N L+ + K++DFGL++ GD + APE +
Sbjct: 134 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAY 191
Query: 308 GHLTAKSDVYSFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPQLGERRRFYRLIDPCL 366
+ KSDV++FGV+L E+ T G + + L+E + YR+ P
Sbjct: 192 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE----------KDYRMERP-- 239
Query: 367 EGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPL 406
EGC EK +L +C + RP +E+ +A + +
Sbjct: 240 EGC-----PEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 104/210 (49%), Gaps = 21/210 (10%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDG-LQGHKEWLAEVNYLGGLIHP 187
LG+G FG VY+G N +K VAVKT+N L+ E+L E + + G
Sbjct: 25 LGQGSFGMVYEG----NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCH 80
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSL-----------PLPWSIRMKIALD 236
++V+L+G + L+V E M G L+++L RSL P +++A +
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYL--RSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 237 AAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 296
A G+A+L+ K ++RD N ++ ++ K+ DFG+ +D E + +
Sbjct: 139 IADGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLP 195
Query: 297 YGYAAPEYVMTGHLTAKSDVYSFGVVLLEM 326
+ APE + G T SD++SFGVVL E+
Sbjct: 196 VRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 129/280 (46%), Gaps = 33/280 (11%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG G +G VY+G V L VAVKTL D ++ +E+L E + + HPN
Sbjct: 26 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 75
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALDAAKGLAFLHEE 247
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 133
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
+K I+RD N L+ + K++DFGL++ GD + APE +
Sbjct: 134 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAY 191
Query: 308 GHLTAKSDVYSFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPQLGERRRFYRLIDPCL 366
+ KSDV++FGV+L E+ T G + + L+E + YR+ P
Sbjct: 192 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE----------KDYRMERP-- 239
Query: 367 EGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPL 406
EGC EK +L +C + RP +E+ +A + +
Sbjct: 240 EGC-----PEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 146/337 (43%), Gaps = 48/337 (14%)
Query: 99 GEELKISPQLRKFSFNELKSATKSF---------RPECLLGEGGFGCVYKGWINMNGTAT 149
G ++ I P F+F + A + F + E ++G G FG V G + + G
Sbjct: 6 GMKIFIDP----FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKRE 61
Query: 150 VKPGTGLPVAVKTLNHDGLQGHK-EWLAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEF 208
+ VA+KTL + + ++L+E + +G HPN++ L G + +++ EF
Sbjct: 62 IF------VAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEF 115
Query: 209 MPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEY 268
M GSL++ L + + + A G+ +L A+ ++RD NIL++
Sbjct: 116 MENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYL---ADMNYVHRDLAARNILVNSNL 172
Query: 269 NAKLSDFGLAKDGPEGDKTHVSTRVMG---TYGYAAPEYVMTGHLTAKSDVYSFGVVLLE 325
K+SDFGL++ + T +G + APE + T+ SDV+S+G+V+ E
Sbjct: 173 VCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWE 232
Query: 326 MLT-GRRSMDKNRPNGEHNLVEWARPQLGERRRFYRLIDPCLEGCFSIKGAEKTIQLAAS 384
+++ G R N +E + YRL P + QL
Sbjct: 233 VMSYGERPYWDMTNQDVINAIE----------QDYRLPPP-------MDCPSALHQLMLD 275
Query: 385 CLNRDQKARPRMSEVVEALKPL----PYLKDMASSSS 417
C +D+ RP+ ++V L + LK MA SS
Sbjct: 276 CWQKDRNHRPKFGQIVNTLDKMIRNPNSLKAMAPLSS 312
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 129/280 (46%), Gaps = 33/280 (11%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG G +G VY+G V L VAVKTL D ++ +E+L E + + HPN
Sbjct: 26 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 75
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALDAAKGLAFLHEE 247
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 76 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 133
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
+K I+RD N L+ + K++DFGL++ GD + APE +
Sbjct: 134 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAY 191
Query: 308 GHLTAKSDVYSFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPQLGERRRFYRLIDPCL 366
+ KSDV++FGV+L E+ T G + + L+E + YR+ P
Sbjct: 192 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE----------KDYRMERP-- 239
Query: 367 EGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPL 406
EGC EK +L +C + RP +E+ +A + +
Sbjct: 240 EGC-----PEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 132/299 (44%), Gaps = 41/299 (13%)
Query: 120 TKSFRPECL-----LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHK-E 173
T P C+ +G G FG VYKG + T +PVA+KTL + + +
Sbjct: 38 TTEIHPSCVTRQKVIGAGEFGEVYKGMLK-----TSSGKKEVPVAIKTLKAGYTEKQRVD 92
Query: 174 WLAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKI 233
+L E +G H N+++L G + +++ E+M G+L+ L + + +
Sbjct: 93 FLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGM 152
Query: 234 ALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAK---DGPEGDKTHVS 290
A G+ +L A ++RD NIL++ K+SDFGL++ D PE T
Sbjct: 153 LRGIAAGMKYL---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSG 209
Query: 291 TRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARP 350
++ + APE + T+ SDV+SFG+V+ E++T GE E +
Sbjct: 210 GKI--PIRWTAPEAISYRKFTSASDVWSFGIVMWEVMT----------YGERPYWELSNH 257
Query: 351 QLGER-RRFYRLIDP--CLEGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPL 406
++ + +RL P C + QL C +++ RP+ +++V L L
Sbjct: 258 EVMKAINDGFRLPTPMDCPSAIY---------QLMMQCWQQERARRPKFADIVSILDKL 307
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 129/280 (46%), Gaps = 33/280 (11%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG G +G VY+G V L VAVKTL D ++ +E+L E + + HPN
Sbjct: 25 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 74
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALDAAKGLAFLHEE 247
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 75 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 132
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
+K I+RD N L+ + K++DFGL++ GD + APE +
Sbjct: 133 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAY 190
Query: 308 GHLTAKSDVYSFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPQLGERRRFYRLIDPCL 366
+ KSDV++FGV+L E+ T G + + L+E + YR+ P
Sbjct: 191 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE----------KDYRMERP-- 238
Query: 367 EGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPL 406
EGC EK +L +C + RP +E+ +A + +
Sbjct: 239 EGC-----PEKVYELMRACWQWNPSDRPSFAEIHQAFETM 273
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 132/283 (46%), Gaps = 39/283 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG G +G VY+G V L VAVKTL D ++ +E+L E + + HPN
Sbjct: 34 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 83
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALDAAKGLAFLHEE 247
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 84 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 141
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
+K I+RD N L+ + K++DFGL++ GD + APE +
Sbjct: 142 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAY 199
Query: 308 GHLTAKSDVYSFGVVLLEMLTGRRS----MDKNRPNGEHNLVEWARPQLGERRRFYRLID 363
+ KSDV++FGV+L E+ T S +D ++ + L+E + YR+
Sbjct: 200 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV---YELLE----------KDYRMER 246
Query: 364 PCLEGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPL 406
P EGC EK +L +C + RP +E+ +A + +
Sbjct: 247 P--EGC-----PEKVYELMRACWQWNPSDRPSFAEIHQAFETM 282
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 129/280 (46%), Gaps = 33/280 (11%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG G +G VY+G V L VAVKTL D ++ +E+L E + + HPN
Sbjct: 228 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 277
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALDAAKGLAFLHEE 247
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 278 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE-- 335
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
+K I+R+ N L+ + K++DFGL++ GD + APE +
Sbjct: 336 -KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAY 393
Query: 308 GHLTAKSDVYSFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPQLGERRRFYRLIDPCL 366
+ KSDV++FGV+L E+ T G + + L+E + YR+ P
Sbjct: 394 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE----------KDYRMERP-- 441
Query: 367 EGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPL 406
EGC EK +L +C + RP +E+ +A + +
Sbjct: 442 EGC-----PEKVYELMRACWQWNPSDRPSFAEIHQAFETM 476
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 129/287 (44%), Gaps = 35/287 (12%)
Query: 126 ECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHK-EWLAEVNYLGGL 184
E ++G G FG V G + + G LPVA+KTL + + ++L E + +G
Sbjct: 27 ERVIGAGEFGEVCSGRLKLPGKRE------LPVAIKTLKVGYTEKQRRDFLGEASIMGQF 80
Query: 185 IHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFL 244
HPN++ L G + ++V E+M GSL+ L + + + + G+ +L
Sbjct: 81 DHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYL 140
Query: 245 HEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAK---DGPEGDKTHVSTRVMGTYGYAA 301
++ ++RD NIL++ K+SDFGL++ D PE T ++ + A
Sbjct: 141 ---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTA 195
Query: 302 PEYVMTGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPQLGERRRFYRL 361
PE + T+ SDV+S+G+V+ E+++ RP E + + YRL
Sbjct: 196 PEAIAFRKFTSASDVWSYGIVMWEVVSY-----GERPYWEMT----NQDVIKAVEEGYRL 246
Query: 362 IDP--CLEGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPL 406
P C + QL C +++ +RP+ E+V L L
Sbjct: 247 PSPMDCPAALY---------QLMLDCWQKERNSRPKFDEIVNMLDKL 284
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 135/300 (45%), Gaps = 43/300 (14%)
Query: 121 KSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNY 180
+S R E LG+G FG V+ G NGT V A+KTL G + +L E
Sbjct: 18 ESLRLEVKLGQGCFGEVWMG--TWNGTTRV--------AIKTLK-PGTMSPEAFLQEAQV 66
Query: 181 LGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHL---FRRSLPLPWSIRMKIALDA 237
+ L H LV+L + ++ +V E+M +GSL + L + L LP + M A
Sbjct: 67 MKKLRHEKLVQLYAV-VSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDM--AAQI 123
Query: 238 AKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY 297
A G+A++ ++RD + +NIL+ K++DFGLA+ + + T
Sbjct: 124 ASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT-ARQGAKFPI 179
Query: 298 GYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPQLGERRR 357
+ APE + G T KSDV+SFG++L E+ T R N R L + R
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN---------REVLDQVER 230
Query: 358 FYRLIDPCLEGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPLPYLKDMASSSS 417
YR+ PC C E L C +D + RP E ++A +L+D +S+
Sbjct: 231 GYRM--PCPPEC-----PESLHDLMCQCWRKDPEERPTF-EYLQA-----FLEDYFTSTE 277
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 129/280 (46%), Gaps = 33/280 (11%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG G +G VY+G V L VAVKTL D ++ +E+L E + + HPN
Sbjct: 22 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 71
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALDAAKGLAFLHEE 247
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 72 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 129
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
+K I+RD N L+ + K++DFGL++ GD + APE +
Sbjct: 130 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAPAGAKFPIKWTAPESLAY 187
Query: 308 GHLTAKSDVYSFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPQLGERRRFYRLIDPCL 366
+ KSDV++FGV+L E+ T G + + L+E + YR+ P
Sbjct: 188 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE----------KDYRMERP-- 235
Query: 367 EGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPL 406
EGC EK +L +C + RP +E+ +A + +
Sbjct: 236 EGC-----PEKVYELMRACWQWNPSDRPSFAEIHQAFETM 270
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 129/280 (46%), Gaps = 33/280 (11%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG G +G VY+G V L VAVKTL D ++ +E+L E + + HPN
Sbjct: 21 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 70
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALDAAKGLAFLHEE 247
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 128
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
+K I+RD N L+ + K++DFGL++ GD + APE +
Sbjct: 129 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAY 186
Query: 308 GHLTAKSDVYSFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPQLGERRRFYRLIDPCL 366
+ KSDV++FGV+L E+ T G + + L+E + YR+ P
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE----------KDYRMERP-- 234
Query: 367 EGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPL 406
EGC EK +L +C + RP +E+ +A + +
Sbjct: 235 EGC-----PEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 129/280 (46%), Gaps = 33/280 (11%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG G +G VY+G V L VAVKTL D ++ +E+L E + + HPN
Sbjct: 23 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 72
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALDAAKGLAFLHEE 247
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 73 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 130
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
+K I+RD N L+ + K++DFGL++ GD + APE +
Sbjct: 131 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAY 188
Query: 308 GHLTAKSDVYSFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPQLGERRRFYRLIDPCL 366
+ KSDV++FGV+L E+ T G + + L+E + YR+ P
Sbjct: 189 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE----------KDYRMERP-- 236
Query: 367 EGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPL 406
EGC EK +L +C + RP +E+ +A + +
Sbjct: 237 EGC-----PEKVYELMRACWQWNPSDRPSFAEIHQAFETM 271
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 129/280 (46%), Gaps = 33/280 (11%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG G +G VY+G V L VAVKTL D ++ +E+L E + + HPN
Sbjct: 23 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 72
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALDAAKGLAFLHEE 247
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 73 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 130
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
+K I+RD N L+ + K++DFGL++ GD + APE +
Sbjct: 131 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAPAGAKFPIKWTAPESLAY 188
Query: 308 GHLTAKSDVYSFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPQLGERRRFYRLIDPCL 366
+ KSDV++FGV+L E+ T G + + L+E + YR+ P
Sbjct: 189 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE----------KDYRMERP-- 236
Query: 367 EGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPL 406
EGC EK +L +C + RP +E+ +A + +
Sbjct: 237 EGC-----PEKVYELMRACWQWNPSDRPSFAEIHQAFETM 271
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 129/280 (46%), Gaps = 33/280 (11%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG G +G VY+G V L VAVKTL D ++ +E+L E + + HPN
Sbjct: 23 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 72
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALDAAKGLAFLHEE 247
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 73 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 130
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
+K I+RD N L+ + K++DFGL++ GD + APE +
Sbjct: 131 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAY 188
Query: 308 GHLTAKSDVYSFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPQLGERRRFYRLIDPCL 366
+ KSDV++FGV+L E+ T G + + L+E + YR+ P
Sbjct: 189 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE----------KDYRMERP-- 236
Query: 367 EGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPL 406
EGC EK +L +C + RP +E+ +A + +
Sbjct: 237 EGC-----PEKVYELMRACWQWNPSDRPSFAEIHQAFETM 271
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 129/280 (46%), Gaps = 33/280 (11%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG G +G VY+G V L VAVKTL D ++ +E+L E + + HPN
Sbjct: 21 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 70
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALDAAKGLAFLHEE 247
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 71 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 128
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
+K I+RD N L+ + K++DFGL++ GD + APE +
Sbjct: 129 -KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAY 186
Query: 308 GHLTAKSDVYSFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPQLGERRRFYRLIDPCL 366
+ KSDV++FGV+L E+ T G + + L+E + YR+ P
Sbjct: 187 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE----------KDYRMERP-- 234
Query: 367 EGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPL 406
EGC EK +L +C + RP +E+ +A + +
Sbjct: 235 EGC-----PEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 135/300 (45%), Gaps = 43/300 (14%)
Query: 121 KSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNY 180
+S R E LG+G FG V+ G NGT V A+KTL G + +L E
Sbjct: 7 ESLRLEVKLGQGCFGEVWMG--TWNGTTRV--------AIKTLK-PGTMSPEAFLQEAQV 55
Query: 181 LGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHL---FRRSLPLPWSIRMKIALDA 237
+ L H LV+L + ++ +V E+M +GSL + L + L LP + M A
Sbjct: 56 MKKLRHEKLVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM--AAQI 112
Query: 238 AKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY 297
A G+A++ ++RD + +NIL+ K++DFGLA+ + + T
Sbjct: 113 ASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT-ARQGAKFPI 168
Query: 298 GYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPQLGERRR 357
+ APE + G T KSDV+SFG++L E+ T R N R L + R
Sbjct: 169 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN---------REVLDQVER 219
Query: 358 FYRLIDPCLEGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPLPYLKDMASSSS 417
YR+ PC C E L C +D + RP E ++A +L+D +S+
Sbjct: 220 GYRM--PCPPEC-----PESLHDLMCQCWRKDPEERPTF-EYLQA-----FLEDYFTSTE 266
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 135/300 (45%), Gaps = 43/300 (14%)
Query: 121 KSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNY 180
+S R E LG+G FG V+ G NGT V A+KTL G + +L E
Sbjct: 18 ESLRLEVKLGQGCFGEVWMG--TWNGTTRV--------AIKTLK-PGTMSPEAFLQEAQV 66
Query: 181 LGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHL---FRRSLPLPWSIRMKIALDA 237
+ L H LV+L + ++ +V E+M +GSL + L + L LP + M A
Sbjct: 67 MKKLRHEKLVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM--AAQI 123
Query: 238 AKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY 297
A G+A++ ++RD + +NIL+ K++DFGLA+ + + T
Sbjct: 124 ASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT-ARQGAKFPI 179
Query: 298 GYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPQLGERRR 357
+ APE + G T KSDV+SFG++L E+ T R N R L + R
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN---------REVLDQVER 230
Query: 358 FYRLIDPCLEGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPLPYLKDMASSSS 417
YR+ PC C E L C +D + RP E ++A +L+D +S+
Sbjct: 231 GYRM--PCPPEC-----PESLHDLMCQCWRKDPEERPTF-EYLQA-----FLEDYFTSTE 277
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 141/314 (44%), Gaps = 43/314 (13%)
Query: 106 PQLRKFSFNELKSATKSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNH 165
PQ + + + + +S R E LG+G FG V+ G NGT V A+KTL
Sbjct: 252 PQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMG--TWNGTTRV--------AIKTLK- 300
Query: 166 DGLQGHKEWLAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHL---FRRS 222
G + +L E + L H LV+L + ++ +V E+M +GSL + L +
Sbjct: 301 PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKGETGKY 359
Query: 223 LPLPWSIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGP 282
L LP + M A A G+A++ ++RD + +NIL+ K++DFGLA+
Sbjct: 360 LRLPQLVDM--AAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIE 414
Query: 283 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 342
+ + T + APE + G T KSDV+SFG++L E+ T R N
Sbjct: 415 DNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--- 470
Query: 343 NLVEWARPQLGERRRFYRLIDPCLEGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEA 402
R L + R YR+ PC C E L C ++ + RP E ++A
Sbjct: 471 ------REVLDQVERGYRM--PCPPEC-----PESLHDLMCQCWRKEPEERPTF-EYLQA 516
Query: 403 LKPLPYLKDMASSS 416
+L+D +S+
Sbjct: 517 -----FLEDYFTST 525
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 135/300 (45%), Gaps = 43/300 (14%)
Query: 121 KSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNY 180
+S R E LG+G FG V+ G NGT V A+KTL G + +L E
Sbjct: 9 ESLRLEVKLGQGCFGEVWMG--TWNGTTRV--------AIKTLK-PGTMSPEAFLQEAQV 57
Query: 181 LGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHL---FRRSLPLPWSIRMKIALDA 237
+ L H LV+L + ++ +V E+M +GSL + L + L LP + M A
Sbjct: 58 MKKLRHEKLVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM--AAQI 114
Query: 238 AKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY 297
A G+A++ ++RD + +NIL+ K++DFGLA+ + + T
Sbjct: 115 ASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT-ARQGAKFPI 170
Query: 298 GYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPQLGERRR 357
+ APE + G T KSDV+SFG++L E+ T R N R L + R
Sbjct: 171 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN---------REVLDQVER 221
Query: 358 FYRLIDPCLEGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPLPYLKDMASSSS 417
YR+ PC C E L C +D + RP E ++A +L+D +S+
Sbjct: 222 GYRM--PCPPEC-----PESLHDLMCQCWRKDPEERPTF-EYLQA-----FLEDYFTSTE 268
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 107/212 (50%), Gaps = 21/212 (9%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDG-LQGHKEWLAEVNYLGGLIHP 187
LG+G FG VY+G G +P T VA+KT+N ++ E+L E + +
Sbjct: 18 LGQGSFGMVYEG--VAKGVVKDEPETR--VAIKTVNEAASMRERIEFLNEASVMKEFNCH 73
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSL-----------PLPWSIRMKIALD 236
++V+L+G + L++ E M RG L+++L RSL P S +++A +
Sbjct: 74 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPEMENNPVLAPPSLSKMIQMAGE 131
Query: 237 AAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 296
A G+A+L+ ++RD N ++ ++ K+ DFG+ +D E D + +
Sbjct: 132 IADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLP 188
Query: 297 YGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ +PE + G T SDV+SFGVVL E+ T
Sbjct: 189 VRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 135/300 (45%), Gaps = 43/300 (14%)
Query: 121 KSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNY 180
+S R E LG+G FG V+ G NGT V A+KTL G + +L E
Sbjct: 18 ESLRLEVKLGQGCFGEVWMG--TWNGTTRV--------AIKTLK-PGTMSPEAFLQEAQV 66
Query: 181 LGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHL---FRRSLPLPWSIRMKIALDA 237
+ L H LV+L + ++ +V E+M +GSL + L + L LP + M A
Sbjct: 67 MKKLRHEKLVQLYAV-VSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDM--AAQI 123
Query: 238 AKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY 297
A G+A++ ++RD + +NIL+ K++DFGLA+ + + T
Sbjct: 124 ASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT-ARQGAKFPI 179
Query: 298 GYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPQLGERRR 357
+ APE + G T KSDV+SFG++L E+ T R N R L + R
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN---------REVLDQVER 230
Query: 358 FYRLIDPCLEGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPLPYLKDMASSSS 417
YR+ PC C E L C +D + RP E ++A +L+D +S+
Sbjct: 231 GYRM--PCPPEC-----PESLHDLMCQCWRKDPEERPTF-EYLQA-----FLEDYFTSTE 277
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 107/212 (50%), Gaps = 21/212 (9%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDG-LQGHKEWLAEVNYLGGLIHP 187
LG+G FG VY+G G +P T VA+KT+N ++ E+L E + +
Sbjct: 27 LGQGSFGMVYEG--VAKGVVKDEPETR--VAIKTVNEAASMRERIEFLNEASVMKEFNCH 82
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSL-----------PLPWSIRMKIALD 236
++V+L+G + L++ E M RG L+++L RSL P S +++A +
Sbjct: 83 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPEMENNPVLAPPSLSKMIQMAGE 140
Query: 237 AAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 296
A G+A+L+ ++RD N ++ ++ K+ DFG+ +D E D + +
Sbjct: 141 IADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLP 197
Query: 297 YGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ +PE + G T SDV+SFGVVL E+ T
Sbjct: 198 VRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 129/280 (46%), Gaps = 33/280 (11%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG G +G VY+G V L VAVKTL D ++ +E+L E + + HPN
Sbjct: 225 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 274
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALDAAKGLAFLHEE 247
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 275 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 332
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
+K I+R+ N L+ + K++DFGL++ GD + APE +
Sbjct: 333 -KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAY 390
Query: 308 GHLTAKSDVYSFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPQLGERRRFYRLIDPCL 366
+ KSDV++FGV+L E+ T G + + L+E + YR+ P
Sbjct: 391 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE----------KDYRMERP-- 438
Query: 367 EGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPL 406
EGC EK +L +C + RP +E+ +A + +
Sbjct: 439 EGC-----PEKVYELMRACWQWNPSDRPSFAEIHQAFETM 473
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 129/280 (46%), Gaps = 33/280 (11%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG G +G VY+G V L VAVKTL D ++ +E+L E + + HPN
Sbjct: 267 LGGGQYGEVYEG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 316
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALDAAKGLAFLHEE 247
LV+L+G C + ++ EFM G+L ++L + + + +A + + +L
Sbjct: 317 LVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE-- 374
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
+K I+R+ N L+ + K++DFGL++ GD + APE +
Sbjct: 375 -KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAY 432
Query: 308 GHLTAKSDVYSFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPQLGERRRFYRLIDPCL 366
+ KSDV++FGV+L E+ T G + + L+E + YR+ P
Sbjct: 433 NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE----------KDYRMERP-- 480
Query: 367 EGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPL 406
EGC EK +L +C + RP +E+ +A + +
Sbjct: 481 EGC-----PEKVYELMRACWQWNPSDRPSFAEIHQAFETM 515
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 135/300 (45%), Gaps = 43/300 (14%)
Query: 121 KSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNY 180
+S R E LG+G FG V+ G NGT V A+KTL G + +L E
Sbjct: 18 ESLRLEVKLGQGCFGEVWMG--TWNGTTRV--------AIKTLK-PGTMSPEAFLQEAQV 66
Query: 181 LGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHL---FRRSLPLPWSIRMKIALDA 237
+ + H LV+L + ++ +V E+M +GSL + L + L LP + M A
Sbjct: 67 MKKIRHEKLVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM--AAQI 123
Query: 238 AKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY 297
A G+A++ ++RD + +NIL+ K++DFGLA+ + + T
Sbjct: 124 ASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT-ARQGAKFPI 179
Query: 298 GYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPQLGERRR 357
+ APE + G T KSDV+SFG++L E+ T R N R L + R
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN---------REVLDQVER 230
Query: 358 FYRLIDPCLEGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPLPYLKDMASSSS 417
YR+ PC C E L C +D + RP E ++A +L+D +S+
Sbjct: 231 GYRM--PCPPEC-----PESLHDLMCQCWRKDPEERPTF-EYLQA-----FLEDYFTSTE 277
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 126/286 (44%), Gaps = 31/286 (10%)
Query: 126 ECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHK-EWLAEVNYLGGL 184
E ++G G FG V +G + G VA+KTL + + E+L+E + +G
Sbjct: 21 EEVIGAGEFGEVCRGRLKAPGKKES------CVAIKTLKGGYTERQRREFLSEASIMGQF 74
Query: 185 IHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFL 244
HPN+++L G +++ EFM G+L++ L + + A G+ +L
Sbjct: 75 EHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYL 134
Query: 245 HEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMG---TYGYAA 301
AE ++RD NIL++ K+SDFGL++ E T +G + A
Sbjct: 135 ---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTA 191
Query: 302 PEYVMTGHLTAKSDVYSFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPQLGERRRFYR 360
PE + T+ SD +S+G+V+ E+++ G R N +E + YR
Sbjct: 192 PEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIE----------QDYR 241
Query: 361 LIDPCLEGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPL 406
L P C QL C +D+ ARPR +VV AL +
Sbjct: 242 LPPP--PDC-----PTSLHQLMLDCWQKDRNARPRFPQVVSALDKM 280
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 118/257 (45%), Gaps = 39/257 (15%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDG-----LQGHKEWLAEVNYLGG 183
+G G FG VYKG +G VAVK LN LQ K EV L
Sbjct: 32 IGSGSFGTVYKG--KWHGD----------VAVKMLNVTAPTPQQLQAFKN---EVGVLRK 76
Query: 184 LIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAF 243
H N++ +G + Q +V ++ SL +HL + IA A+G+ +
Sbjct: 77 TRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDY 135
Query: 244 LHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 303
LH K +I+RD K++NI L + K+ DFGLA + +H ++ G+ + APE
Sbjct: 136 LHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE 192
Query: 304 YVM---TGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWA-----RPQLGER 355
+ + + +SDVY+FG+VL E++TG+ + + N ++E P L +
Sbjct: 193 VIRMQDSNPYSFQSDVYAFGIVLYELMTGQ--LPYSNINNRDQIIEMVGRGSLSPDLSKV 250
Query: 356 R-----RFYRLIDPCLE 367
R R RL+ CL+
Sbjct: 251 RSNCPKRMKRLMAECLK 267
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 140/314 (44%), Gaps = 43/314 (13%)
Query: 106 PQLRKFSFNELKSATKSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNH 165
PQ + + + + +S R E LG+G FG V+ G NGT V A+KTL
Sbjct: 170 PQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMG--TWNGTTRV--------AIKTLK- 218
Query: 166 DGLQGHKEWLAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHL---FRRS 222
G + +L E + L H LV+L + ++ +V E+M +GSL + L +
Sbjct: 219 PGNMSPEAFLQEAQVMKKLRHEKLVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKGEMGKY 277
Query: 223 LPLPWSIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGP 282
L LP + M A A G+A++ ++RD + +NIL+ K++DFGL +
Sbjct: 278 LRLPQLVDM--AAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLGRLIE 332
Query: 283 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 342
+ + T + APE + G T KSDV+SFG++L E+ T R N
Sbjct: 333 DNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--- 388
Query: 343 NLVEWARPQLGERRRFYRLIDPCLEGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEA 402
R L + R YR+ PC C E L C +D + RP E ++A
Sbjct: 389 ------REVLDQVERGYRM--PCPPEC-----PESLHDLMCQCWRKDPEERPTF-EYLQA 434
Query: 403 LKPLPYLKDMASSS 416
+L+D +S+
Sbjct: 435 -----FLEDYFTST 443
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 141/314 (44%), Gaps = 43/314 (13%)
Query: 106 PQLRKFSFNELKSATKSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNH 165
PQ + + + + +S R E LG+G FG V+ G NGT V A+KTL
Sbjct: 169 PQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMG--TWNGTTRV--------AIKTLK- 217
Query: 166 DGLQGHKEWLAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHL---FRRS 222
G + +L E + L H LV+L + ++ +V E+M +GSL + L +
Sbjct: 218 PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKGETGKY 276
Query: 223 LPLPWSIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGP 282
L LP + M A A G+A++ ++RD + +NIL+ K++DFGLA+
Sbjct: 277 LRLPQLVDM--AAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIE 331
Query: 283 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 342
+ + T + APE + G T KSDV+SFG++L E+ T R N
Sbjct: 332 DNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--- 387
Query: 343 NLVEWARPQLGERRRFYRLIDPCLEGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEA 402
R L + R YR+ PC C E L C ++ + RP E ++A
Sbjct: 388 ------REVLDQVERGYRM--PCPPEC-----PESLHDLMCQCWRKEPEERPTF-EYLQA 433
Query: 403 LKPLPYLKDMASSS 416
+L+D +S+
Sbjct: 434 -----FLEDYFTST 442
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 134/300 (44%), Gaps = 43/300 (14%)
Query: 121 KSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNY 180
+S R E LG+G FG V+ G NGT V A+KTL G + +L E
Sbjct: 18 ESLRLEVKLGQGCFGEVWMG--TWNGTTRV--------AIKTLK-PGTMSPEAFLQEAQV 66
Query: 181 LGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHL---FRRSLPLPWSIRMKIALDA 237
+ L H LV+L + ++ +V E+M +GSL + L + L LP + M A
Sbjct: 67 MKKLRHEKLVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM--AAQI 123
Query: 238 AKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY 297
A G+A++ ++RD +NIL+ K++DFGLA+ + + T
Sbjct: 124 ASGMAYVER---MNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYT-ARQGAKFPI 179
Query: 298 GYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPQLGERRR 357
+ APE + G T KSDV+SFG++L E+ T R N R L + R
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN---------REVLDQVER 230
Query: 358 FYRLIDPCLEGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPLPYLKDMASSSS 417
YR+ PC C E L C +D + RP E ++A +L+D +S+
Sbjct: 231 GYRM--PCPPEC-----PESLHDLMCQCWRKDPEERPTF-EYLQA-----FLEDYFTSTE 277
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 124/269 (46%), Gaps = 37/269 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG G FG V+ G+ N + VAVK+L G +LAE N + L H
Sbjct: 29 LGAGQFGEVWMGYYNGHTK----------VAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 77
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALDAAKGLAFLHEE 247
LV+L ++ ++ E+M GSL + L S + L + + +A A+G+AF+ E
Sbjct: 78 LVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 135
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
+ I+RD + +NIL+ + K++DFGLA+ + + T + APE +
Sbjct: 136 --RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT-AREGAKFPIKWTAPEAINY 192
Query: 308 GHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGE--HNLVEWARPQLGERRRFYRLIDPC 365
G T KSDV+SFG++L E++T R N E NL R YR++ P
Sbjct: 193 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-----------ERGYRMVRP- 240
Query: 366 LEGCFSIKGAEKTIQLAASCLNRDQKARP 394
+ C E+ QL C + RP
Sbjct: 241 -DNC-----PEELYQLMRLCWKERPEDRP 263
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 141/314 (44%), Gaps = 43/314 (13%)
Query: 106 PQLRKFSFNELKSATKSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNH 165
PQ + + + + +S R E LG+G FG V+ G NGT V A+KTL
Sbjct: 169 PQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMG--TWNGTTRV--------AIKTLK- 217
Query: 166 DGLQGHKEWLAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHL---FRRS 222
G + +L E + L H LV+L + ++ +V E+M +GSL + L +
Sbjct: 218 PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKGETGKY 276
Query: 223 LPLPWSIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGP 282
L LP + M A A G+A++ ++RD + +NIL+ K++DFGLA+
Sbjct: 277 LRLPQLVDM--AAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIE 331
Query: 283 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 342
+ + T + APE + G T KSDV+SFG++L E+ T R N
Sbjct: 332 DNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--- 387
Query: 343 NLVEWARPQLGERRRFYRLIDPCLEGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEA 402
R L + R YR+ PC C E L C ++ + RP E ++A
Sbjct: 388 ------REVLDQVERGYRM--PCPPEC-----PESLHDLMCQCWRKEPEERPTF-EYLQA 433
Query: 403 LKPLPYLKDMASSS 416
+L+D +S+
Sbjct: 434 -----FLEDYFTST 442
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 124/269 (46%), Gaps = 37/269 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG G FG V+ G+ N + VAVK+L G +LAE N + L H
Sbjct: 27 LGAGQFGEVWMGYYNGHTK----------VAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 75
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALDAAKGLAFLHEE 247
LV+L ++ ++ E+M GSL + L S + L + + +A A+G+AF+ E
Sbjct: 76 LVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 133
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
+ I+RD + +NIL+ + K++DFGLA+ + + T + APE +
Sbjct: 134 --RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT-AREGAKFPIKWTAPEAINY 190
Query: 308 GHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGE--HNLVEWARPQLGERRRFYRLIDPC 365
G T KSDV+SFG++L E++T R N E NL R YR++ P
Sbjct: 191 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-----------ERGYRMVRP- 238
Query: 366 LEGCFSIKGAEKTIQLAASCLNRDQKARP 394
+ C E+ QL C + RP
Sbjct: 239 -DNC-----PEELYQLMRLCWKERPEDRP 261
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 117/257 (45%), Gaps = 39/257 (15%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDG-----LQGHKEWLAEVNYLGG 183
+G G FG VYKG +G VAVK LN LQ K EV L
Sbjct: 32 IGSGSFGTVYKG--KWHGD----------VAVKMLNVTAPTPQQLQAFKN---EVGVLRK 76
Query: 184 LIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAF 243
H N++ +G Q +V ++ SL +HL + IA A+G+ +
Sbjct: 77 TRHVNILLFMGYSTAP-QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDY 135
Query: 244 LHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 303
LH K +I+RD K++NI L + K+ DFGLA + +H ++ G+ + APE
Sbjct: 136 LHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE 192
Query: 304 YVM---TGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWA-----RPQLGER 355
+ + + +SDVY+FG+VL E++TG+ + + N ++E P L +
Sbjct: 193 VIRMQDSNPYSFQSDVYAFGIVLYELMTGQ--LPYSNINNRDQIIEMVGRGSLSPDLSKV 250
Query: 356 R-----RFYRLIDPCLE 367
R R RL+ CL+
Sbjct: 251 RSNCPKRMKRLMAECLK 267
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 124/269 (46%), Gaps = 37/269 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG G FG V+ G+ N + VAVK+L G +LAE N + L H
Sbjct: 30 LGAGQFGEVWMGYYNGHTK----------VAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 78
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALDAAKGLAFLHEE 247
LV+L ++ ++ E+M GSL + L S + L + + +A A+G+AF+ E
Sbjct: 79 LVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 136
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
+ I+RD + +NIL+ + K++DFGLA+ + + T + APE +
Sbjct: 137 --RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT-AREGAKFPIKWTAPEAINY 193
Query: 308 GHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGE--HNLVEWARPQLGERRRFYRLIDPC 365
G T KSDV+SFG++L E++T R N E NL R YR++ P
Sbjct: 194 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-----------ERGYRMVRP- 241
Query: 366 LEGCFSIKGAEKTIQLAASCLNRDQKARP 394
+ C E+ QL C + RP
Sbjct: 242 -DNC-----PEELYQLMRLCWKERPEDRP 264
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 126/286 (44%), Gaps = 31/286 (10%)
Query: 126 ECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHK-EWLAEVNYLGGL 184
E ++G G FG V +G + G VA+KTL + + E+L+E + +G
Sbjct: 19 EEVIGAGEFGEVCRGRLKAPGKKES------CVAIKTLKGGYTERQRREFLSEASIMGQF 72
Query: 185 IHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFL 244
HPN+++L G +++ EFM G+L++ L + + A G+ +L
Sbjct: 73 EHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYL 132
Query: 245 HEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMG---TYGYAA 301
AE ++RD NIL++ K+SDFGL++ E T +G + A
Sbjct: 133 ---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTA 189
Query: 302 PEYVMTGHLTAKSDVYSFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPQLGERRRFYR 360
PE + T+ SD +S+G+V+ E+++ G R N +E + YR
Sbjct: 190 PEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIE----------QDYR 239
Query: 361 LIDPCLEGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPL 406
L P C QL C +D+ ARPR +VV AL +
Sbjct: 240 LPPP--PDC-----PTSLHQLMLDCWQKDRNARPRFPQVVSALDKM 278
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 134/300 (44%), Gaps = 43/300 (14%)
Query: 121 KSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNY 180
+S R E LG+G FG V+ G NGT V A+KTL G + +L E
Sbjct: 18 ESLRLEVKLGQGCFGEVWMG--TWNGTTRV--------AIKTLK-PGTMSPEAFLQEAQV 66
Query: 181 LGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHL---FRRSLPLPWSIRMKIALDA 237
+ L H LV+L + ++ +V E+M +G L + L + L LP + M A
Sbjct: 67 MKKLRHEKLVQLYAV-VSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDM--AAQI 123
Query: 238 AKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY 297
A G+A++ ++RD + +NIL+ K++DFGLA+ + + T
Sbjct: 124 ASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT-ARQGAKFPI 179
Query: 298 GYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPQLGERRR 357
+ APE + G T KSDV+SFG++L E+ T R N R L + R
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN---------REVLDQVER 230
Query: 358 FYRLIDPCLEGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPLPYLKDMASSSS 417
YR+ PC C E L C +D + RP E ++A +L+D +S+
Sbjct: 231 GYRM--PCPPEC-----PESLHDLMCQCWRKDPEERPTF-EYLQA-----FLEDYFTSTE 277
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 109/212 (51%), Gaps = 21/212 (9%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDG-LQGHKEWLAEVNYLGGLIHP 187
LG+G FG VY+G G +P T VA+KT+N ++ E+L E + +
Sbjct: 33 LGQGSFGMVYEG--VAKGVVKDEPETR--VAIKTVNEAASMRERIEFLNEASVMKEFNCH 88
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSL-----------PLPWSIRMKIALD 236
++V+L+G + L++ E M RG L+++L RSL P S +++A +
Sbjct: 89 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPEMENNPVLAPPSLSKMIQMAGE 146
Query: 237 AAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 296
A G+A+L+ A K ++RD N ++ ++ K+ DFG+ +D E D + +
Sbjct: 147 IADGMAYLN--ANK-FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 203
Query: 297 YGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ +PE + G T SDV+SFGVVL E+ T
Sbjct: 204 VRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 107/212 (50%), Gaps = 21/212 (9%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDG-LQGHKEWLAEVNYLGGLIHP 187
LG+G FG VY+G G +P T VA+KT+N ++ E+L E + +
Sbjct: 20 LGQGSFGMVYEG--VAKGVVKDEPETR--VAIKTVNEAASMRERIEFLNEASVMKEFNCH 75
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSL-----------PLPWSIRMKIALD 236
++V+L+G + L++ E M RG L+++L RSL P S +++A +
Sbjct: 76 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPEMENNPVLAPPSLSKMIQMAGE 133
Query: 237 AAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 296
A G+A+L+ ++RD N ++ ++ K+ DFG+ +D E D + +
Sbjct: 134 IADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 190
Query: 297 YGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ +PE + G T SDV+SFGVVL E+ T
Sbjct: 191 VRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 107/212 (50%), Gaps = 21/212 (9%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDG-LQGHKEWLAEVNYLGGLIHP 187
LG+G FG VY+G G +P T VA+KT+N ++ E+L E + +
Sbjct: 33 LGQGSFGMVYEG--VAKGVVKDEPETR--VAIKTVNEAASMRERIEFLNEASVMKEFNCH 88
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSL-----------PLPWSIRMKIALD 236
++V+L+G + L++ E M RG L+++L RSL P S +++A +
Sbjct: 89 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPAMANNPVLAPPSLSKMIQMAGE 146
Query: 237 AAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 296
A G+A+L+ ++RD N ++ ++ K+ DFG+ +D E D + +
Sbjct: 147 IADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 203
Query: 297 YGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ +PE + G T SDV+SFGVVL E+ T
Sbjct: 204 VRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 134/300 (44%), Gaps = 43/300 (14%)
Query: 121 KSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNY 180
+S R E LG+G FG V+ G NGT V A+KTL G + +L E
Sbjct: 18 ESLRLEVKLGQGCFGEVWMG--TWNGTTRV--------AIKTLK-PGTMSPEAFLQEAQV 66
Query: 181 LGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHL---FRRSLPLPWSIRMKIALDA 237
+ L H LV+L + ++ +V E+M +G L + L + L LP + M A
Sbjct: 67 MKKLRHEKLVQLYAV-VSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDM--AAQI 123
Query: 238 AKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY 297
A G+A++ ++RD + +NIL+ K++DFGLA+ + + T
Sbjct: 124 ASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT-ARQGAKFPI 179
Query: 298 GYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPQLGERRR 357
+ APE + G T KSDV+SFG++L E+ T R N R L + R
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN---------REVLDQVER 230
Query: 358 FYRLIDPCLEGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPLPYLKDMASSSS 417
YR+ PC C E L C +D + RP E ++A +L+D +S+
Sbjct: 231 GYRM--PCPPEC-----PESLHDLMCQCWRKDPEERPTF-EYLQA-----FLEDYFTSTE 277
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 124/269 (46%), Gaps = 37/269 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG G FG V+ G+ N + VAVK+L G +LAE N + L H
Sbjct: 31 LGAGQFGEVWMGYYNGHTK----------VAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 79
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALDAAKGLAFLHEE 247
LV+L ++ ++ E+M GSL + L S + L + + +A A+G+AF+ E
Sbjct: 80 LVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 137
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
+ I+RD + +NIL+ + K++DFGLA+ + + T + APE +
Sbjct: 138 --RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT-AREGAKFPIKWTAPEAINY 194
Query: 308 GHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGE--HNLVEWARPQLGERRRFYRLIDPC 365
G T KSDV+SFG++L E++T R N E NL R YR++ P
Sbjct: 195 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-----------ERGYRMVRP- 242
Query: 366 LEGCFSIKGAEKTIQLAASCLNRDQKARP 394
+ C E+ QL C + RP
Sbjct: 243 -DNC-----PEELYQLMRLCWKERPEDRP 265
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 107/212 (50%), Gaps = 21/212 (9%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDG-LQGHKEWLAEVNYLGGLIHP 187
LG+G FG VY+G G +P T VA+KT+N ++ E+L E + +
Sbjct: 24 LGQGSFGMVYEG--VAKGVVKDEPETR--VAIKTVNEAASMRERIEFLNEASVMKEFNCH 79
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSL-----------PLPWSIRMKIALD 236
++V+L+G + L++ E M RG L+++L RSL P S +++A +
Sbjct: 80 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPEMENNPVLAPPSLSKMIQMAGE 137
Query: 237 AAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 296
A G+A+L+ ++RD N ++ ++ K+ DFG+ +D E D + +
Sbjct: 138 IADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 194
Query: 297 YGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ +PE + G T SDV+SFGVVL E+ T
Sbjct: 195 VRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 105/214 (49%), Gaps = 31/214 (14%)
Query: 121 KSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNY 180
+S + E LG G FG V+ N + VAVKT+ G + +LAE N
Sbjct: 182 ESLKLEKKLGAGQFGEVWMATYNKHTK----------VAVKTMK-PGSMSVEAFLAEANV 230
Query: 181 LGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKIALDA 237
+ L H LVKL + + ++ EFM +GSL + L PLP I +
Sbjct: 231 MKTLQHDKLVKL-HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQI-- 287
Query: 238 AKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY 297
A+G+AF+ + + I+RD + +NIL+ K++DFGLA+ G +
Sbjct: 288 AEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVGAKF-----------PI 333
Query: 298 GYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTGRR 331
+ APE + G T KSDV+SFG++L+E++T R
Sbjct: 334 KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGR 367
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 141/314 (44%), Gaps = 43/314 (13%)
Query: 106 PQLRKFSFNELKSATKSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNH 165
PQ + + + + +S R E LG+G FG V+ G NGT V A+KTL
Sbjct: 169 PQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMG--TWNGTTRV--------AIKTLK- 217
Query: 166 DGLQGHKEWLAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHL---FRRS 222
G + +L E + L H LV+L + ++ +V E+M +GSL + L +
Sbjct: 218 PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV-VSEEPIYIVGEYMSKGSLLDFLKGETGKY 276
Query: 223 LPLPWSIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGP 282
L LP + M A A G+A++ ++RD + +NIL+ K++DFGLA+
Sbjct: 277 LRLPQLVDM--AAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIE 331
Query: 283 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEH 342
+ + T + APE + G T KSDV+SFG++L E+ T R N
Sbjct: 332 DNEYT-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--- 387
Query: 343 NLVEWARPQLGERRRFYRLIDPCLEGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEA 402
R L + R YR+ PC C E L C ++ + RP E ++A
Sbjct: 388 ------REVLDQVERGYRM--PCPPEC-----PESLHDLMCQCWRKEPEERPTF-EYLQA 433
Query: 403 LKPLPYLKDMASSS 416
+L+D +S+
Sbjct: 434 -----FLEDYFTST 442
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 124/269 (46%), Gaps = 37/269 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG G FG V+ G+ N + VAVK+L G +LAE N + L H
Sbjct: 21 LGAGQFGEVWMGYYNGHTK----------VAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 69
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALDAAKGLAFLHEE 247
LV+L ++ ++ E+M GSL + L S + L + + +A A+G+AF+ E
Sbjct: 70 LVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 127
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
+ I+RD + +NIL+ + K++DFGLA+ + + T + APE +
Sbjct: 128 --RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT-AREGAKFPIKWTAPEAINY 184
Query: 308 GHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGE--HNLVEWARPQLGERRRFYRLIDPC 365
G T KSDV+SFG++L E++T R N E NL R YR++ P
Sbjct: 185 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-----------ERGYRMVRP- 232
Query: 366 LEGCFSIKGAEKTIQLAASCLNRDQKARP 394
+ C E+ QL C + RP
Sbjct: 233 -DNC-----PEELYQLMRLCWKERPEDRP 255
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 128/285 (44%), Gaps = 35/285 (12%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHK-EWLAEVNYLGGLIH 186
++G G FG V G + + + VA+KTL + + ++L E + +G H
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEIS------VAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 187 PNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHE 246
PN+++L G + ++V E+M GSL++ L + + + A G+ +L
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL-- 163
Query: 247 EAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAK---DGPEGDKTHVSTRVMGTYGYAAPE 303
++ ++RD NIL++ K+SDFGLA+ D PE T ++ + +PE
Sbjct: 164 -SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKI--PIRWTSPE 220
Query: 304 YVMTGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPQLGERRRFYRLID 363
+ T+ SDV+S+G+VL E+++ RP E + + + YRL
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSY-----GERPYWEMS----NQDVIKAVDEGYRLPP 271
Query: 364 P--CLEGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPL 406
P C + QL C +D+ RP+ ++V L L
Sbjct: 272 PMDCPAALY---------QLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 124/269 (46%), Gaps = 37/269 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG G FG V+ G+ N + VAVK+L G +LAE N + L H
Sbjct: 23 LGAGQFGEVWMGYYNGHTK----------VAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 71
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALDAAKGLAFLHEE 247
LV+L ++ ++ E+M GSL + L S + L + + +A A+G+AF+ E
Sbjct: 72 LVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 129
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
+ I+RD + +NIL+ + K++DFGLA+ + + T + APE +
Sbjct: 130 --RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT-AREGAKFPIKWTAPEAINY 186
Query: 308 GHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGE--HNLVEWARPQLGERRRFYRLIDPC 365
G T KSDV+SFG++L E++T R N E NL R YR++ P
Sbjct: 187 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-----------ERGYRMVRP- 234
Query: 366 LEGCFSIKGAEKTIQLAASCLNRDQKARP 394
+ C E+ QL C + RP
Sbjct: 235 -DNC-----PEELYQLMRLCWKERPEDRP 257
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 107/212 (50%), Gaps = 21/212 (9%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDG-LQGHKEWLAEVNYLGGLIHP 187
LG+G FG VY+G G +P T VA+KT+N ++ E+L E + +
Sbjct: 23 LGQGSFGMVYEG--VAKGVVKDEPETR--VAIKTVNEAASMRERIEFLNEASVMKEFNCH 78
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSL-----------PLPWSIRMKIALD 236
++V+L+G + L++ E M RG L+++L RSL P S +++A +
Sbjct: 79 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPAMANNPVLAPPSLSKMIQMAGE 136
Query: 237 AAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 296
A G+A+L+ ++RD N ++ ++ K+ DFG+ +D E D + +
Sbjct: 137 IADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 193
Query: 297 YGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ +PE + G T SDV+SFGVVL E+ T
Sbjct: 194 VRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 107/212 (50%), Gaps = 21/212 (9%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDG-LQGHKEWLAEVNYLGGLIHP 187
LG+G FG VY+G G +P T VA+KT+N ++ E+L E + +
Sbjct: 26 LGQGSFGMVYEG--VAKGVVKDEPETR--VAIKTVNEAASMRERIEFLNEASVMKEFNCH 81
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSL-----------PLPWSIRMKIALD 236
++V+L+G + L++ E M RG L+++L RSL P S +++A +
Sbjct: 82 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPEMENNPVLAPPSLSKMIQMAGE 139
Query: 237 AAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 296
A G+A+L+ ++RD N ++ ++ K+ DFG+ +D E D + +
Sbjct: 140 IADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 196
Query: 297 YGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ +PE + G T SDV+SFGVVL E+ T
Sbjct: 197 VRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 124/269 (46%), Gaps = 37/269 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG G FG V+ G+ N + VAVK+L G +LAE N + L H
Sbjct: 22 LGAGQFGEVWMGYYNGHTK----------VAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 70
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALDAAKGLAFLHEE 247
LV+L ++ ++ E+M GSL + L S + L + + +A A+G+AF+ E
Sbjct: 71 LVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 128
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
+ I+RD + +NIL+ + K++DFGLA+ + + T + APE +
Sbjct: 129 --RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT-AREGAKFPIKWTAPEAINY 185
Query: 308 GHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGE--HNLVEWARPQLGERRRFYRLIDPC 365
G T KSDV+SFG++L E++T R N E NL R YR++ P
Sbjct: 186 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-----------ERGYRMVRP- 233
Query: 366 LEGCFSIKGAEKTIQLAASCLNRDQKARP 394
+ C E+ QL C + RP
Sbjct: 234 -DNC-----PEELYQLMRLCWKERPEDRP 256
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 107/212 (50%), Gaps = 21/212 (9%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDG-LQGHKEWLAEVNYLGGLIHP 187
LG+G FG VY+G G +P T VA+KT+N ++ E+L E + +
Sbjct: 27 LGQGSFGMVYEG--VAKGVVKDEPETR--VAIKTVNEAASMRERIEFLNEASVMKEFNCH 82
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSL-----------PLPWSIRMKIALD 236
++V+L+G + L++ E M RG L+++L RSL P S +++A +
Sbjct: 83 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPEMENNPVLAPPSLSKMIQMAGE 140
Query: 237 AAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 296
A G+A+L+ ++RD N ++ ++ K+ DFG+ +D E D + +
Sbjct: 141 IADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 197
Query: 297 YGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ +PE + G T SDV+SFGVVL E+ T
Sbjct: 198 VRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 107/212 (50%), Gaps = 21/212 (9%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDG-LQGHKEWLAEVNYLGGLIHP 187
LG+G FG VY+G G +P T VA+KT+N ++ E+L E + +
Sbjct: 26 LGQGSFGMVYEG--VAKGVVKDEPETR--VAIKTVNEAASMRERIEFLNEASVMKEFNCH 81
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSL-----------PLPWSIRMKIALD 236
++V+L+G + L++ E M RG L+++L RSL P S +++A +
Sbjct: 82 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPEMENNPVLAPPSLSKMIQMAGE 139
Query: 237 AAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 296
A G+A+L+ ++RD N ++ ++ K+ DFG+ +D E D + +
Sbjct: 140 IADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 196
Query: 297 YGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ +PE + G T SDV+SFGVVL E+ T
Sbjct: 197 VRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 106/214 (49%), Gaps = 21/214 (9%)
Query: 121 KSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNY 180
+S + E LG G FG V+ N + VAVKT+ G + +LAE N
Sbjct: 15 ESLKLEKKLGAGQFGEVWMATYNKHTK----------VAVKTMK-PGSMSVEAFLAEANV 63
Query: 181 LGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKIALDA 237
+ L H LVKL + + ++ EFM +GSL + L PLP I +
Sbjct: 64 MKTLQHDKLVKL-HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLI--DFSAQI 120
Query: 238 AKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY 297
A+G+AF+ + + I+RD + +NIL+ K++DFGLA+ + + T
Sbjct: 121 AEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT-AREGAKFPI 176
Query: 298 GYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTGRR 331
+ APE + G T KSDV+SFG++L+E++T R
Sbjct: 177 KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGR 210
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 135/300 (45%), Gaps = 43/300 (14%)
Query: 121 KSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNY 180
+S R E LG+G FG V+ G NGT V A+KTL G + +L E
Sbjct: 8 ESLRLEVKLGQGCFGEVWMG--TWNGTTRV--------AIKTLK-PGTMSPEAFLQEAQV 56
Query: 181 LGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHL---FRRSLPLPWSIRMKIALDA 237
+ L H LV+L + ++ +V E+M +GSL + L + L LP + M A
Sbjct: 57 MKKLRHEKLVQLYAV-VSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDM--AAQI 113
Query: 238 AKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY 297
A G+A++ ++RD + +NIL+ K++DFGLA+ + + T
Sbjct: 114 ASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXT-ARQGAKFPI 169
Query: 298 GYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPQLGERRR 357
+ APE + G T KSDV+SFG++L E+ T R N R L + R
Sbjct: 170 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN---------REVLDQVER 220
Query: 358 FYRLIDPCLEGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPLPYLKDMASSSS 417
YR+ PC C E L C ++ + RP E ++A +L+D +S+
Sbjct: 221 GYRM--PCPPEC-----PESLHDLMCQCWRKEPEERPTF-EYLQA-----FLEDYFTSTE 267
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 124/269 (46%), Gaps = 37/269 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG G FG V+ G+ N + VAVK+L G +LAE N + L H
Sbjct: 26 LGAGQFGEVWMGYYNGHTK----------VAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 74
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALDAAKGLAFLHEE 247
LV+L ++ ++ E+M GSL + L S + L + + +A A+G+AF+ E
Sbjct: 75 LVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 132
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
+ I+RD + +NIL+ + K++DFGLA+ + + T + APE +
Sbjct: 133 --RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT-AREGAKFPIKWTAPEAINY 189
Query: 308 GHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGE--HNLVEWARPQLGERRRFYRLIDPC 365
G T KSDV+SFG++L E++T R N E NL R YR++ P
Sbjct: 190 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-----------ERGYRMVRP- 237
Query: 366 LEGCFSIKGAEKTIQLAASCLNRDQKARP 394
+ C E+ QL C + RP
Sbjct: 238 -DNC-----PEELYQLMRLCWKERPEDRP 260
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 107/213 (50%), Gaps = 25/213 (11%)
Query: 121 KSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNY 180
+S + E LG G FG V+ N + VAVKT+ G + +LAE N
Sbjct: 188 ESLKLEKKLGAGQFGEVWMATYNKHTK----------VAVKTMK-PGSMSVEAFLAEANV 236
Query: 181 LGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKIALDA 237
+ L H LVKL + + ++ EFM +GSL + L PLP I +
Sbjct: 237 MKTLQHDKLVKL-HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQI-- 293
Query: 238 AKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY 297
A+G+AF+ + + I+RD + +NIL+ K++DFGLA+ + + T R +
Sbjct: 294 AEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT---AREGAKF 347
Query: 298 --GYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ APE + G T KSDV+SFG++L+E++T
Sbjct: 348 PIKWTAPEAINFGSFTIKSDVWSFGILLMEIVT 380
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 124/269 (46%), Gaps = 37/269 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG G FG V+ G+ N + VAVK+L G +LAE N + L H
Sbjct: 27 LGAGQFGEVWMGYYNGHTK----------VAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 75
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALDAAKGLAFLHEE 247
LV+L ++ ++ E+M GSL + L S + L + + +A A+G+AF+ E
Sbjct: 76 LVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 133
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
+ I+RD + +NIL+ + K++DFGLA+ + + T + APE +
Sbjct: 134 --RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT-AREGAKFPIKWTAPEAINY 190
Query: 308 GHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGE--HNLVEWARPQLGERRRFYRLIDPC 365
G T KSDV+SFG++L E++T R N E NL R YR++ P
Sbjct: 191 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-----------ERGYRMVRP- 238
Query: 366 LEGCFSIKGAEKTIQLAASCLNRDQKARP 394
+ C E+ QL C + RP
Sbjct: 239 -DNC-----PEELYQLMRLCWKERPEDRP 261
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 124/273 (45%), Gaps = 45/273 (16%)
Query: 129 LGEGGFGCVYKGWINMN---GTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLI 185
LG G FG V+ G N N T+KPGT P + +L E + L
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSP--------------ESFLEEAQIMKKLK 62
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKIALDAAKGLA 242
H LV+L + ++ +V E+M +GSL + L R+L LP + M A A G+A
Sbjct: 63 HDKLVQLYAV-VSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDM--AAQVAAGMA 119
Query: 243 FLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAP 302
++ I+RD +++NIL+ K++DFGLA+ + + T + AP
Sbjct: 120 YIER---MNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXT-ARQGAKFPIKWTAP 175
Query: 303 EYVMTGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPQLGERRRFYRLI 362
E + G T KSDV+SFG++L E++T R N R L + R YR+
Sbjct: 176 EAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN---------REVLEQVERGYRM- 225
Query: 363 DPCLEGC-FSIKGAEKTIQLAASCLNRDQKARP 394
PC + C S+ +L C +D + RP
Sbjct: 226 -PCPQDCPISLH------ELMIHCWKKDPEERP 251
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 124/269 (46%), Gaps = 37/269 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG G FG V+ G+ N + VAVK+L G +LAE N + L H
Sbjct: 21 LGAGQFGEVWMGYYNGHTK----------VAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 69
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALDAAKGLAFLHEE 247
LV+L ++ ++ E+M GSL + L S + L + + +A A+G+AF+ E
Sbjct: 70 LVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 127
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
+ I+RD + +NIL+ + K++DFGLA+ + + T + APE +
Sbjct: 128 --RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT-AREGAKFPIKWTAPEAINY 184
Query: 308 GHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGE--HNLVEWARPQLGERRRFYRLIDPC 365
G T KSDV+SFG++L E++T R N E NL R YR++ P
Sbjct: 185 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-----------ERGYRMVRP- 232
Query: 366 LEGCFSIKGAEKTIQLAASCLNRDQKARP 394
+ C E+ QL C + RP
Sbjct: 233 -DNC-----PEELYQLMRLCWKERPEDRP 255
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 105/212 (49%), Gaps = 21/212 (9%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDG-LQGHKEWLAEVNYLGGLIHP 187
LG+G FG VY+G VK VA+KT+N ++ E+L E + +
Sbjct: 55 LGQGSFGMVYEG----VAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCH 110
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSL-----------PLPWSIRMKIALD 236
++V+L+G + L++ E M RG L+++L RSL P S +++A +
Sbjct: 111 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPEMENNPVLAPPSLSKMIQMAGE 168
Query: 237 AAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 296
A G+A+L+ ++RD N ++ ++ K+ DFG+ +D E D + +
Sbjct: 169 IADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 225
Query: 297 YGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ +PE + G T SDV+SFGVVL E+ T
Sbjct: 226 VRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 117/257 (45%), Gaps = 39/257 (15%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDG-----LQGHKEWLAEVNYLGG 183
+G G FG VYKG +G VAVK LN LQ K EV L
Sbjct: 20 IGSGSFGTVYKG--KWHGD----------VAVKMLNVTAPTPQQLQAFKN---EVGVLRK 64
Query: 184 LIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAF 243
H N++ +G + Q +V ++ SL +HL + IA A+G+ +
Sbjct: 65 TRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDY 123
Query: 244 LHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 303
LH K +I+RD K++NI L + K+ DFGLA +H ++ G+ + APE
Sbjct: 124 LHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 180
Query: 304 YVM---TGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWA-----RPQLGER 355
+ + + +SDVY+FG+VL E++TG+ + + N ++E P L +
Sbjct: 181 VIRMQDSNPYSFQSDVYAFGIVLYELMTGQ--LPYSNINNRDQIIEMVGRGSLSPDLSKV 238
Query: 356 R-----RFYRLIDPCLE 367
R R RL+ CL+
Sbjct: 239 RSNCPKRMKRLMAECLK 255
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 103/203 (50%), Gaps = 12/203 (5%)
Query: 128 LLGEGGFGCVYKG-WINMNGTATVKPGTGLPVAVKTL-NHDGLQGHKEWLAEVNYLGGLI 185
+LG G FG V+KG WI + + PV +K + + G Q + + +G L
Sbjct: 38 VLGSGVFGTVHKGVWIPEGESIKI------PVCIKVIEDKSGRQSFQAVTDHMLAIGSLD 91
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLH 245
H ++V+L+G C +L V +++P GSL +H+ + L + + + AKG+ +L
Sbjct: 92 HAHIVRLLGLCPGSSLQL-VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLE 150
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV 305
E +++R+ N+LL +++DFG+A P DK + + + A E +
Sbjct: 151 EHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESI 207
Query: 306 MTGHLTAKSDVYSFGVVLLEMLT 328
G T +SDV+S+GV + E++T
Sbjct: 208 HFGKYTHQSDVWSYGVTVWELMT 230
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 135/300 (45%), Gaps = 43/300 (14%)
Query: 121 KSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNY 180
+S R E LG+G FG V+ G NGT V A+KTL G + +L E
Sbjct: 11 ESLRLEVKLGQGCFGEVWMG--TWNGTTRV--------AIKTLK-PGTMSPEAFLQEAQV 59
Query: 181 LGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHL---FRRSLPLPWSIRMKIALDA 237
+ L H LV+L + ++ +V E+M +GSL + L + L LP + M A
Sbjct: 60 MKKLRHEKLVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDM--AAQI 116
Query: 238 AKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY 297
A G+A++ ++RD + +NIL+ K++DFGLA+ + + T
Sbjct: 117 ASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT-ARQGAKFPI 172
Query: 298 GYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPQLGERRR 357
+ APE + G T KSDV+SFG++L E+ T R N R L + R
Sbjct: 173 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN---------REVLDQVER 223
Query: 358 FYRLIDPCLEGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPLPYLKDMASSSS 417
YR+ PC C E L C ++ + RP E ++A +L+D +S+
Sbjct: 224 GYRM--PCPPEC-----PESLHDLMCQCWRKEPEERPTF-EYLQA-----FLEDYFTSTE 270
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 127/281 (45%), Gaps = 37/281 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG G FG V G K VAVK + +G E+ E + L HP
Sbjct: 16 LGSGQFGVVKLG----------KWKGQYDVAVKMIK-EGSMSEDEFFQEAQTMMKLSHPK 64
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEEA 248
LVK G C ++ +V E++ G L N+L L S +++ D +G+AFL
Sbjct: 65 LVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQ 124
Query: 249 EKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGT---YGYAAPEYV 305
I+RD N L+D + K+SDFG+ + D +VS+ +GT ++APE
Sbjct: 125 ---FIHRDLAARNCLVDRDLCVKVSDFGMTRYVL--DDQYVSS--VGTKFPVKWSAPEVF 177
Query: 306 MTGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPQLGERRRFYRLIDPC 365
++KSDV++FG+++ E+ + + N E L ++ + R YR P
Sbjct: 178 HYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVL------KVSQGHRLYR---PH 228
Query: 366 LEGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPL 406
L ++ Q+ SC + + RP +++ +++PL
Sbjct: 229 L-------ASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPL 262
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 95/204 (46%), Gaps = 14/204 (6%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGL---QGHKEWLAEVNYLGGLI 185
LG+G FG V +G + TV VAVK L D L + +++ EVN + L
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVS------VAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 73
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLH 245
H NL++L G + ++ V E P GSL + L + + A+ A+G+ +L
Sbjct: 74 HRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE 132
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGT-YGYAAPEY 304
K I+RD N+LL K+ DFGL + P+ D +V + + APE
Sbjct: 133 S---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPES 189
Query: 305 VMTGHLTAKSDVYSFGVVLLEMLT 328
+ T + SD + FGV L EM T
Sbjct: 190 LKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 124/269 (46%), Gaps = 37/269 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG G FG V+ G+ N + VAVK+L G +LAE N + L H
Sbjct: 21 LGAGQFGEVWMGYYNGHTK----------VAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 69
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALDAAKGLAFLHEE 247
LV+L ++ ++ E+M GSL + L S + L + + +A A+G+AF+ E
Sbjct: 70 LVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 127
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
+ I+RD + +NIL+ + K++DFGLA+ + + T + APE +
Sbjct: 128 --RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT-AREGAKFPIKWTAPEAINY 184
Query: 308 GHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGE--HNLVEWARPQLGERRRFYRLIDPC 365
G T KSDV+SFG++L E++T R N E NL R YR++ P
Sbjct: 185 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-----------ERGYRMVRP- 232
Query: 366 LEGCFSIKGAEKTIQLAASCLNRDQKARP 394
+ C E+ QL C + RP
Sbjct: 233 -DNC-----PEELYQLMRLCWKERPEDRP 255
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 128/285 (44%), Gaps = 35/285 (12%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHK-EWLAEVNYLGGLIH 186
++G G FG V G + + + VA+KTL + + ++L E + +G H
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEIS------VAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 187 PNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHE 246
PN+++L G + ++V E+M GSL++ L + + + A G+ +L
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL-- 163
Query: 247 EAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAK---DGPEGDKTHVSTRVMGTYGYAAPE 303
++ ++RD NIL++ K+SDFGL++ D PE T ++ + +PE
Sbjct: 164 -SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPE 220
Query: 304 YVMTGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPQLGERRRFYRLID 363
+ T+ SDV+S+G+VL E+++ RP E + + + YRL
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSY-----GERPYWEMS----NQDVIKAVDEGYRLPP 271
Query: 364 P--CLEGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPL 406
P C + QL C +D+ RP+ ++V L L
Sbjct: 272 PMDCPAALY---------QLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 104/204 (50%), Gaps = 17/204 (8%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG G FG V+ G+ N + VAVK+L G +LAE N + L H
Sbjct: 16 LGAGQFGEVWMGYYNGHTK----------VAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 64
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALDAAKGLAFLHEE 247
LV+L ++ ++ E+M GSL + L S + L + + +A A+G+AF+ E
Sbjct: 65 LVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 122
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
+ I+RD + +NIL+ + K++DFGLA+ + + T + APE +
Sbjct: 123 --RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT-AREGAKFPIKWTAPEAINY 179
Query: 308 GHLTAKSDVYSFGVVLLEMLTGRR 331
G T KSDV+SFG++L E++T R
Sbjct: 180 GTFTIKSDVWSFGILLTEIVTHGR 203
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 95/204 (46%), Gaps = 14/204 (6%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGL---QGHKEWLAEVNYLGGLI 185
LG+G FG V +G + TV VAVK L D L + +++ EVN + L
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVS------VAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 79
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLH 245
H NL++L G + ++ V E P GSL + L + + A+ A+G+ +L
Sbjct: 80 HRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE 138
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGT-YGYAAPEY 304
K I+RD N+LL K+ DFGL + P+ D +V + + APE
Sbjct: 139 S---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPES 195
Query: 305 VMTGHLTAKSDVYSFGVVLLEMLT 328
+ T + SD + FGV L EM T
Sbjct: 196 LKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 128/285 (44%), Gaps = 35/285 (12%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHK-EWLAEVNYLGGLIH 186
++G G FG V G + + + VA+KTL + + ++L E + +G H
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEIS------VAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 187 PNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHE 246
PN+++L G + ++V E+M GSL++ L + + + A G+ +L
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL-- 163
Query: 247 EAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAK---DGPEGDKTHVSTRVMGTYGYAAPE 303
++ ++RD NIL++ K+SDFGL++ D PE T ++ + +PE
Sbjct: 164 -SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPE 220
Query: 304 YVMTGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPQLGERRRFYRLID 363
+ T+ SDV+S+G+VL E+++ RP E + + + YRL
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSY-----GERPYWEMS----NQDVIKAVDEGYRLPP 271
Query: 364 P--CLEGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPL 406
P C + QL C +D+ RP+ ++V L L
Sbjct: 272 PMDCPAALY---------QLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 128/285 (44%), Gaps = 35/285 (12%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHK-EWLAEVNYLGGLIH 186
++G G FG V G + + + VA+KTL + + ++L E + +G H
Sbjct: 50 VVGAGEFGEVCSGRLKLPSKKEIS------VAIKTLKVGYTEKQRRDFLGEASIMGQFDH 103
Query: 187 PNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHE 246
PN+++L G + ++V E+M GSL++ L + + + A G+ +L
Sbjct: 104 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL-- 161
Query: 247 EAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAK---DGPEGDKTHVSTRVMGTYGYAAPE 303
++ ++RD NIL++ K+SDFGL++ D PE T ++ + +PE
Sbjct: 162 -SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPE 218
Query: 304 YVMTGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPQLGERRRFYRLID 363
+ T+ SDV+S+G+VL E+++ RP E + + + YRL
Sbjct: 219 AIAYRKFTSASDVWSYGIVLWEVMSY-----GERPYWEMS----NQDVIKAVDEGYRLPP 269
Query: 364 P--CLEGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPL 406
P C + QL C +D+ RP+ ++V L L
Sbjct: 270 PMDCPAALY---------QLMLDCWQKDRNNRPKFEQIVSILDKL 305
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 103/203 (50%), Gaps = 12/203 (5%)
Query: 128 LLGEGGFGCVYKG-WINMNGTATVKPGTGLPVAVKTL-NHDGLQGHKEWLAEVNYLGGLI 185
+LG G FG V+KG WI + + PV +K + + G Q + + +G L
Sbjct: 20 VLGSGVFGTVHKGVWIPEGESIKI------PVCIKVIEDKSGRQSFQAVTDHMLAIGSLD 73
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLH 245
H ++V+L+G C +L V +++P GSL +H+ + L + + + AKG+ +L
Sbjct: 74 HAHIVRLLGLCPGSSLQL-VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLE 132
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV 305
E +++R+ N+LL +++DFG+A P DK + + + A E +
Sbjct: 133 EHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESI 189
Query: 306 MTGHLTAKSDVYSFGVVLLEMLT 328
G T +SDV+S+GV + E++T
Sbjct: 190 HFGKYTHQSDVWSYGVTVWELMT 212
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 128/285 (44%), Gaps = 35/285 (12%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHK-EWLAEVNYLGGLIH 186
++G G FG V G + + + VA+KTL + + ++L E + +G H
Sbjct: 40 VVGAGEFGEVCSGRLKLPSKKEIS------VAIKTLKVGYTEKQRRDFLGEASIMGQFDH 93
Query: 187 PNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHE 246
PN+++L G + ++V E+M GSL++ L + + + A G+ +L
Sbjct: 94 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL-- 151
Query: 247 EAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAK---DGPEGDKTHVSTRVMGTYGYAAPE 303
++ ++RD NIL++ K+SDFGL++ D PE T ++ + +PE
Sbjct: 152 -SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPE 208
Query: 304 YVMTGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPQLGERRRFYRLID 363
+ T+ SDV+S+G+VL E+++ RP E + + + YRL
Sbjct: 209 AIAYRKFTSASDVWSYGIVLWEVMSY-----GERPYWEMS----NQDVIKAVDEGYRLPP 259
Query: 364 P--CLEGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPL 406
P C + QL C +D+ RP+ ++V L L
Sbjct: 260 PMDCPAALY---------QLMLDCWQKDRNNRPKFEQIVSILDKL 295
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 95/204 (46%), Gaps = 14/204 (6%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGL---QGHKEWLAEVNYLGGLI 185
LG+G FG V +G + TV VAVK L D L + +++ EVN + L
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVS------VAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 73
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLH 245
H NL++L G + ++ V E P GSL + L + + A+ A+G+ +L
Sbjct: 74 HRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE 132
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGT-YGYAAPEY 304
K I+RD N+LL K+ DFGL + P+ D +V + + APE
Sbjct: 133 S---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPES 189
Query: 305 VMTGHLTAKSDVYSFGVVLLEMLT 328
+ T + SD + FGV L EM T
Sbjct: 190 LKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 127/280 (45%), Gaps = 33/280 (11%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG G +G VY G V L VAVKTL D ++ +E+L E + + HPN
Sbjct: 40 LGGGQYGEVYVG---------VWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPN 89
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR-RSLPLPWSIRMKIALDAAKGLAFLHEE 247
LV+L+G C + +V E+MP G+L ++L + + + +A + + +L
Sbjct: 90 LVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLE-- 147
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
+K I+RD N L+ + K++DFGL++ GD + APE +
Sbjct: 148 -KKNFIHRDLAARNCLVGENHVVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAY 205
Query: 308 GHLTAKSDVYSFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPQLGERRRFYRLIDPCL 366
+ KSDV++FGV+L E+ T G + ++L+E + YR+ P
Sbjct: 206 NTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLE----------KGYRMEQP-- 253
Query: 367 EGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPL 406
EGC K +L +C RP +E +A + +
Sbjct: 254 EGC-----PPKVYELMRACWKWSPADRPSFAETHQAFETM 288
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 128/285 (44%), Gaps = 35/285 (12%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHK-EWLAEVNYLGGLIH 186
++G G FG V G + + + VA+KTL + + ++L E + +G H
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEIS------VAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 187 PNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHE 246
PN+++L G + ++V E+M GSL++ L + + + A G+ +L
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL-- 163
Query: 247 EAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAK---DGPEGDKTHVSTRVMGTYGYAAPE 303
++ ++RD NIL++ K+SDFGL++ D PE T ++ + +PE
Sbjct: 164 -SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPE 220
Query: 304 YVMTGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPQLGERRRFYRLID 363
+ T+ SDV+S+G+VL E+++ RP E + + + YRL
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSY-----GERPYWEMS----NQDVIKAVDEGYRLPP 271
Query: 364 P--CLEGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPL 406
P C + QL C +D+ RP+ ++V L L
Sbjct: 272 PMDCPAALY---------QLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 128/285 (44%), Gaps = 35/285 (12%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHK-EWLAEVNYLGGLIH 186
++G G FG V G + + + VA+KTL + + ++L E + +G H
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEIS------VAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 187 PNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHE 246
PN+++L G + ++V E+M GSL++ L + + + A G+ +L
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL-- 163
Query: 247 EAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAK---DGPEGDKTHVSTRVMGTYGYAAPE 303
++ ++RD NIL++ K+SDFGL++ D PE T ++ + +PE
Sbjct: 164 -SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPE 220
Query: 304 YVMTGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPQLGERRRFYRLID 363
+ T+ SDV+S+G+VL E+++ RP E + + + YRL
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSY-----GERPYWEMS----NQDVIKAVDEGYRLPP 271
Query: 364 P--CLEGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPL 406
P C + QL C +D+ RP+ ++V L L
Sbjct: 272 PMDCPAALY---------QLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 128/285 (44%), Gaps = 35/285 (12%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHK-EWLAEVNYLGGLIH 186
++G G FG V G + + + VA+KTL + + ++L E + +G H
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEIS------VAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 187 PNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHE 246
PN+++L G + ++V E+M GSL++ L + + + A G+ +L
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL-- 163
Query: 247 EAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAK---DGPEGDKTHVSTRVMGTYGYAAPE 303
++ ++RD NIL++ K+SDFGL++ D PE T ++ + +PE
Sbjct: 164 -SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPE 220
Query: 304 YVMTGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPQLGERRRFYRLID 363
+ T+ SDV+S+G+VL E+++ RP E + + + YRL
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSY-----GERPYWEMS----NQDVIKAVDEGYRLPP 271
Query: 364 P--CLEGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPL 406
P C + QL C +D+ RP+ ++V L L
Sbjct: 272 PMDCPAALY---------QLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 106/212 (50%), Gaps = 21/212 (9%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDG-LQGHKEWLAEVNYLGGLIHP 187
LG+G FG VY+G G +P T VA+KT+N ++ E+L E + +
Sbjct: 20 LGQGSFGMVYEG--VAKGVVKDEPETR--VAIKTVNEAASMRERIEFLNEASVMKEFNCH 75
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSL-----------PLPWSIRMKIALD 236
++V+L+G + L++ E M RG L+++L RSL P S +++A +
Sbjct: 76 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYL--RSLRPEMENNPVLAPPSLSKMIQMAGE 133
Query: 237 AAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 296
A G+A+L+ ++RD N + ++ K+ DFG+ +D E D + +
Sbjct: 134 IADGMAYLNA---NKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 190
Query: 297 YGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ +PE + G T SDV+SFGVVL E+ T
Sbjct: 191 VRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 95/204 (46%), Gaps = 14/204 (6%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGL---QGHKEWLAEVNYLGGLI 185
LG+G FG V +G + TV VAVK L D L + +++ EVN + L
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVS------VAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 69
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLH 245
H NL++L G + ++ V E P GSL + L + + A+ A+G+ +L
Sbjct: 70 HRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE 128
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGT-YGYAAPEY 304
K I+RD N+LL K+ DFGL + P+ D +V + + APE
Sbjct: 129 S---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPES 185
Query: 305 VMTGHLTAKSDVYSFGVVLLEMLT 328
+ T + SD + FGV L EM T
Sbjct: 186 LKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 98/202 (48%), Gaps = 12/202 (5%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKE-WLAEVNYLGGLIH 186
+LGEG FG VY+G T G + VAVKT D +KE +++E + L H
Sbjct: 15 ILGEGFFGEVYEG------VYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDH 68
Query: 187 PNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHE 246
P++VKLIG IE++ ++ E P G L ++L R L + +L K +A+L
Sbjct: 69 PHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLES 127
Query: 247 EAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM 306
++RD NIL+ KL DFGL++ + D S + + +PE +
Sbjct: 128 ---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPI-KWMSPESIN 183
Query: 307 TGHLTAKSDVYSFGVVLLEMLT 328
T SDV+ F V + E+L+
Sbjct: 184 FRRFTTASDVWMFAVCMWEILS 205
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 128/285 (44%), Gaps = 35/285 (12%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHK-EWLAEVNYLGGLIH 186
++G G FG V G + + + VA+KTL + + ++L E + +G H
Sbjct: 23 VVGAGEFGEVCSGRLKLPSKKEIS------VAIKTLKVGYTEKQRRDFLGEASIMGQFDH 76
Query: 187 PNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHE 246
PN+++L G + ++V E+M GSL++ L + + + A G+ +L
Sbjct: 77 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL-- 134
Query: 247 EAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAK---DGPEGDKTHVSTRVMGTYGYAAPE 303
++ ++RD NIL++ K+SDFGL++ D PE T ++ + +PE
Sbjct: 135 -SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPE 191
Query: 304 YVMTGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPQLGERRRFYRLID 363
+ T+ SDV+S+G+VL E+++ RP E + + + YRL
Sbjct: 192 AIAYRKFTSASDVWSYGIVLWEVMSY-----GERPYWEMS----NQDVIKAVDEGYRLPP 242
Query: 364 P--CLEGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPL 406
P C + QL C +D+ RP+ ++V L L
Sbjct: 243 PMDCPAALY---------QLMLDCWQKDRNNRPKFEQIVSILDKL 278
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 98/202 (48%), Gaps = 12/202 (5%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKE-WLAEVNYLGGLIH 186
+LGEG FG VY+G T G + VAVKT D +KE +++E + L H
Sbjct: 31 ILGEGFFGEVYEG------VYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDH 84
Query: 187 PNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHE 246
P++VKLIG IE++ ++ E P G L ++L R L + +L K +A+L
Sbjct: 85 PHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLES 143
Query: 247 EAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM 306
++RD NIL+ KL DFGL++ + D S + + +PE +
Sbjct: 144 ---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPI-KWMSPESIN 199
Query: 307 TGHLTAKSDVYSFGVVLLEMLT 328
T SDV+ F V + E+L+
Sbjct: 200 FRRFTTASDVWMFAVCMWEILS 221
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 98/204 (48%), Gaps = 13/204 (6%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG+G FG V + + TG VAVK L H G +++ E+ L L
Sbjct: 18 LGKGNFGSV-----ELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDF 72
Query: 189 LVKLIGCCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHE 246
+VK G ++ LV E++P G L + L R L S + + KG+ +L
Sbjct: 73 IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL-- 130
Query: 247 EAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGT--YGYAAPEY 304
+ ++RD NIL++ E + K++DFGLAK P DK + R G + APE
Sbjct: 131 -GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPL-DKDYYVVREPGQSPIFWYAPES 188
Query: 305 VMTGHLTAKSDVYSFGVVLLEMLT 328
+ + +SDV+SFGVVL E+ T
Sbjct: 189 LSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 95/204 (46%), Gaps = 14/204 (6%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGL---QGHKEWLAEVNYLGGLI 185
LG+G FG V +G + TV VAVK L D L + +++ EVN + L
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVS------VAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 69
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLH 245
H NL++L G + ++ V E P GSL + L + + A+ A+G+ +L
Sbjct: 70 HRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE 128
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGT-YGYAAPEY 304
K I+RD N+LL K+ DFGL + P+ D +V + + APE
Sbjct: 129 S---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPES 185
Query: 305 VMTGHLTAKSDVYSFGVVLLEMLT 328
+ T + SD + FGV L EM T
Sbjct: 186 LKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 98/202 (48%), Gaps = 12/202 (5%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKE-WLAEVNYLGGLIH 186
+LGEG FG VY+G T G + VAVKT D +KE +++E + L H
Sbjct: 19 ILGEGFFGEVYEG------VYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDH 72
Query: 187 PNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHE 246
P++VKLIG IE++ ++ E P G L ++L R L + +L K +A+L
Sbjct: 73 PHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLES 131
Query: 247 EAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM 306
++RD NIL+ KL DFGL++ + D S + + +PE +
Sbjct: 132 ---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPI-KWMSPESIN 187
Query: 307 TGHLTAKSDVYSFGVVLLEMLT 328
T SDV+ F V + E+L+
Sbjct: 188 FRRFTTASDVWMFAVCMWEILS 209
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 127/285 (44%), Gaps = 35/285 (12%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHK-EWLAEVNYLGGLIH 186
++G G FG V G + + + VA+KTL + + ++L E + +G H
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEIS------VAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 187 PNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHE 246
PN+++L G + ++V E+M GSL++ L + + + A G+ +L
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL-- 163
Query: 247 EAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAK---DGPEGDKTHVSTRVMGTYGYAAPE 303
++ ++RD NIL++ K+SDFGL + D PE T ++ + +PE
Sbjct: 164 -SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKI--PIRWTSPE 220
Query: 304 YVMTGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPQLGERRRFYRLID 363
+ T+ SDV+S+G+VL E+++ RP E + + + YRL
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSY-----GERPYWEMS----NQDVIKAVDEGYRLPP 271
Query: 364 P--CLEGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPL 406
P C + QL C +D+ RP+ ++V L L
Sbjct: 272 PMDCPAALY---------QLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 98/204 (48%), Gaps = 13/204 (6%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG+G FG V + + TG VAVK L H G +++ E+ L L
Sbjct: 19 LGKGNFGSV-----ELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDF 73
Query: 189 LVKLIGCCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHE 246
+VK G ++ LV E++P G L + L R L S + + KG+ +L
Sbjct: 74 IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL-- 131
Query: 247 EAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGT--YGYAAPEY 304
+ ++RD NIL++ E + K++DFGLAK P DK + R G + APE
Sbjct: 132 -GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPL-DKDYYVVREPGQSPIFWYAPES 189
Query: 305 VMTGHLTAKSDVYSFGVVLLEMLT 328
+ + +SDV+SFGVVL E+ T
Sbjct: 190 LSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 98/204 (48%), Gaps = 13/204 (6%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG+G FG V + + TG VAVK L H G +++ E+ L L
Sbjct: 31 LGKGNFGSV-----ELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDF 85
Query: 189 LVKLIGCCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHE 246
+VK G ++ LV E++P G L + L R L S + + KG+ +L
Sbjct: 86 IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL-- 143
Query: 247 EAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGT--YGYAAPEY 304
+ ++RD NIL++ E + K++DFGLAK P DK + R G + APE
Sbjct: 144 -GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPL-DKDYYVVREPGQSPIFWYAPES 201
Query: 305 VMTGHLTAKSDVYSFGVVLLEMLT 328
+ + +SDV+SFGVVL E+ T
Sbjct: 202 LSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 135/300 (45%), Gaps = 43/300 (14%)
Query: 121 KSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNY 180
+S R E LG+G FG V+ G NGT V A+KTL G + +L E
Sbjct: 15 ESLRLEVKLGQGCFGEVWMG--TWNGTTRV--------AIKTLK-PGTMSPEAFLQEAQV 63
Query: 181 LGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHL---FRRSLPLPWSIRMKIALDA 237
+ L H LV+L + ++ +V E+M +GSL + L + L LP + M +
Sbjct: 64 MKKLRHEKLVQLYAV-VSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQI-- 120
Query: 238 AKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY 297
A G+A++ ++RD + +NIL+ K++DFGLA+ + + T
Sbjct: 121 ASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT-ARQGAKFPI 176
Query: 298 GYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPQLGERRR 357
+ APE + G T KSDV+SFG++L E+ T R N R L + R
Sbjct: 177 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN---------REVLDQVER 227
Query: 358 FYRLIDPCLEGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPLPYLKDMASSSS 417
YR+ PC C E L C ++ + RP E ++A +L+D +S+
Sbjct: 228 GYRM--PCPPEC-----PESLHDLMCQCWRKEPEERPTF-EYLQA-----FLEDYFTSTE 274
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 135/300 (45%), Gaps = 43/300 (14%)
Query: 121 KSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNY 180
+S R E LG+G FG V+ G NGT V A+KTL G + +L E
Sbjct: 15 ESLRLEVKLGQGCFGEVWMG--TWNGTTRV--------AIKTLK-PGTMSPEAFLQEAQV 63
Query: 181 LGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHL---FRRSLPLPWSIRMKIALDA 237
+ L H LV+L + ++ +V E+M +GSL + L + L LP + M +
Sbjct: 64 MKKLRHEKLVQLYAV-VSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQI-- 120
Query: 238 AKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY 297
A G+A++ ++RD + +NIL+ K++DFGLA+ + + T
Sbjct: 121 ASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWT-ARQGAKFPI 176
Query: 298 GYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPQLGERRR 357
+ APE + G T KSDV+SFG++L E+ T R N R L + R
Sbjct: 177 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN---------REVLDQVER 227
Query: 358 FYRLIDPCLEGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPLPYLKDMASSSS 417
YR+ PC C E L C ++ + RP E ++A +L+D +S+
Sbjct: 228 GYRM--PCPPEC-----PESLHDLMCQCWRKEPEERPTF-EYLQA-----FLEDYFTSTE 274
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 94/204 (46%), Gaps = 14/204 (6%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGL---QGHKEWLAEVNYLGGLI 185
LG+G FG V +G + TV VAVK L D L + +++ EVN + L
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVS------VAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 79
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLH 245
H NL++L G + ++ V E P GSL + L + + A+ A+G+ +L
Sbjct: 80 HRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE 138
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGT-YGYAAPEY 304
K I+RD N+LL K+ DFGL + P+ D V + + APE
Sbjct: 139 S---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPES 195
Query: 305 VMTGHLTAKSDVYSFGVVLLEMLT 328
+ T + SD + FGV L EM T
Sbjct: 196 LKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 103/210 (49%), Gaps = 26/210 (12%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQ--------GHKEWLAEVN 179
+LG+G FG V+ +P +G A+K L L+ ++ LA+VN
Sbjct: 35 VLGQGSFGKVFLV------RKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVN 88
Query: 180 YLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAK 239
HP +VKL + + L+ +F+ G L L + + ++ +A + A
Sbjct: 89 ------HPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA-ELAL 141
Query: 240 GLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 299
GL LH +IYRD K NILLD E + KL+DFGL+K+ + +K S GT Y
Sbjct: 142 GLDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYS--FCGTVEY 196
Query: 300 AAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
APE V + +D +S+GV++ EMLTG
Sbjct: 197 MAPEVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 100/210 (47%), Gaps = 27/210 (12%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDG-----LQGHKEWLAEVNYLGG 183
+G G FG VYKG +G VAVK LN LQ K EV L
Sbjct: 36 IGSGSFGTVYKG--KWHGD----------VAVKMLNVTAPTPQQLQAFKN---EVGVLRK 80
Query: 184 LIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAF 243
H N++ +G + Q +V ++ SL +HL + IA A+G+ +
Sbjct: 81 TRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDY 139
Query: 244 LHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 303
LH K +I+RD K++NI L + K+ DFGLA + +H ++ G+ + APE
Sbjct: 140 LHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE 196
Query: 304 YVMTGH---LTAKSDVYSFGVVLLEMLTGR 330
+ + +SDVY+FG+VL E++TG+
Sbjct: 197 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 226
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 98/217 (45%), Gaps = 22/217 (10%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLI--H 186
LGEG FG V G KP VAVK L D + L + +I H
Sbjct: 36 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 187 PNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIR--------------M 231
N++ L+G C +D ++ E+ +G+L +L R P L +S +
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLV 153
Query: 232 KIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVST 291
A A+G+ +L A K I+RD N+L+ + K++DFGLA+D D +T
Sbjct: 154 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTT 210
Query: 292 RVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ APE + T +SDV+SFGV+L E+ T
Sbjct: 211 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 100/210 (47%), Gaps = 27/210 (12%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDG-----LQGHKEWLAEVNYLGG 183
+G G FG VYKG +G VAVK LN LQ K EV L
Sbjct: 44 IGSGSFGTVYKG--KWHGD----------VAVKMLNVTAPTPQQLQAFKN---EVGVLRK 88
Query: 184 LIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAF 243
H N++ +G + Q +V ++ SL +HL + IA A+G+ +
Sbjct: 89 TRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDY 147
Query: 244 LHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 303
LH K +I+RD K++NI L + K+ DFGLA + +H ++ G+ + APE
Sbjct: 148 LHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE 204
Query: 304 YVMTGH---LTAKSDVYSFGVVLLEMLTGR 330
+ + +SDVY+FG+VL E++TG+
Sbjct: 205 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 94/204 (46%), Gaps = 14/204 (6%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGL---QGHKEWLAEVNYLGGLI 185
LG+G FG V +G + TV VAVK L D L + +++ EVN + L
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVS------VAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 69
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLH 245
H NL++L G + ++ V E P GSL + L + + A+ A+G+ +L
Sbjct: 70 HRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE 128
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGT-YGYAAPEY 304
K I+RD N+LL K+ DFGL + P+ D V + + APE
Sbjct: 129 S---KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPES 185
Query: 305 VMTGHLTAKSDVYSFGVVLLEMLT 328
+ T + SD + FGV L EM T
Sbjct: 186 LKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 124/269 (46%), Gaps = 37/269 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG G FG V+ G+ N + VAVK+L G +LAE N + L H
Sbjct: 17 LGAGQFGEVWMGYYNGHTK----------VAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 65
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALDAAKGLAFLHEE 247
LV+L ++ ++ E+M GSL + L S + L + + +A A+G+AF+ E
Sbjct: 66 LVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 123
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
+ I+R+ + +NIL+ + K++DFGLA+ + + T + APE +
Sbjct: 124 --RNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYT-AREGAKFPIKWTAPEAINY 180
Query: 308 GHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGE--HNLVEWARPQLGERRRFYRLIDPC 365
G T KSDV+SFG++L E++T R N E NL R YR++ P
Sbjct: 181 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-----------ERGYRMVRP- 228
Query: 366 LEGCFSIKGAEKTIQLAASCLNRDQKARP 394
+ C E+ QL C + RP
Sbjct: 229 -DNC-----PEELYQLMRLCWKERPEDRP 251
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 100/210 (47%), Gaps = 27/210 (12%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDG-----LQGHKEWLAEVNYLGG 183
+G G FG VYKG +G VAVK LN LQ K EV L
Sbjct: 16 IGSGSFGTVYKG--KWHGD----------VAVKMLNVTAPTPQQLQAFKN---EVGVLRK 60
Query: 184 LIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAF 243
H N++ +G + Q +V ++ SL +HL + IA A+G+ +
Sbjct: 61 TRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDY 119
Query: 244 LHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 303
LH K +I+RD K++NI L + K+ DFGLA + +H ++ G+ + APE
Sbjct: 120 LHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE 176
Query: 304 YVMTGH---LTAKSDVYSFGVVLLEMLTGR 330
+ + +SDVY+FG+VL E++TG+
Sbjct: 177 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 127/285 (44%), Gaps = 35/285 (12%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHK-EWLAEVNYLGGLIH 186
++G G FG V G + + + VA+KTL + + ++L E + +G H
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEIS------VAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 187 PNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHE 246
PN+++L G + ++V E M GSL++ L + + + A G+ +L
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL-- 163
Query: 247 EAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAK---DGPEGDKTHVSTRVMGTYGYAAPE 303
++ ++RD NIL++ K+SDFGL++ D PE T ++ + +PE
Sbjct: 164 -SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPE 220
Query: 304 YVMTGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPQLGERRRFYRLID 363
+ T+ SDV+S+G+VL E+++ RP E + + + YRL
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSY-----GERPYWEMS----NQDVIKAVDEGYRLPP 271
Query: 364 P--CLEGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPL 406
P C + QL C +D+ RP+ ++V L L
Sbjct: 272 PMDCPAALY---------QLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 93/216 (43%), Gaps = 25/216 (11%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LGEG FG V+ + + VAVK L +++ E L L H +
Sbjct: 26 LGEGAFGKVFLA----ECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQH 81
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSL----------------PLPWSIRMK 232
+V+ G C E L+V+E+M G L F RS PL +
Sbjct: 82 IVRFFGVCTEGRPLLMVFEYMRHGDLNR--FLRSHGPDAKLLAGGEDVAPGPLGLGQLLA 139
Query: 233 IALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTR 292
+A A G+ +L A ++RD T N L+ K+ DFG+++D D V R
Sbjct: 140 VASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGR 196
Query: 293 VMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
M + PE ++ T +SDV+SFGVVL E+ T
Sbjct: 197 TMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 232
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 93/216 (43%), Gaps = 25/216 (11%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LGEG FG V+ + + VAVK L +++ E L L H +
Sbjct: 20 LGEGAFGKVFLA----ECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQH 75
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSL----------------PLPWSIRMK 232
+V+ G C E L+V+E+M G L F RS PL +
Sbjct: 76 IVRFFGVCTEGRPLLMVFEYMRHGDLNR--FLRSHGPDAKLLAGGEDVAPGPLGLGQLLA 133
Query: 233 IALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTR 292
+A A G+ +L A ++RD T N L+ K+ DFG+++D D V R
Sbjct: 134 VASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGR 190
Query: 293 VMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
M + PE ++ T +SDV+SFGVVL E+ T
Sbjct: 191 TMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 226
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 94/216 (43%), Gaps = 25/216 (11%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LGEG FG V+ + + + VAVK L +++ E L L H +
Sbjct: 49 LGEGAFGKVFLAECH----NLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQH 104
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSL----------------PLPWSIRMK 232
+V+ G C E L+V+E+M G L F RS PL +
Sbjct: 105 IVRFFGVCTEGRPLLMVFEYMRHGDLNR--FLRSHGPDAKLLAGGEDVAPGPLGLGQLLA 162
Query: 233 IALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTR 292
+A A G+ +L A ++RD T N L+ K+ DFG+++D D V R
Sbjct: 163 VASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGR 219
Query: 293 VMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
M + PE ++ T +SDV+SFGVVL E+ T
Sbjct: 220 TMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 255
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 123/269 (45%), Gaps = 37/269 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG G G V+ G+ N + VAVK+L G +LAE N + L H
Sbjct: 21 LGAGQAGEVWMGYYNGHTK----------VAVKSLKQ-GSMSPDAFLAEANLMKQLQHQR 69
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALDAAKGLAFLHEE 247
LV+L ++ ++ E+M GSL + L S + L + + +A A+G+AF+ E
Sbjct: 70 LVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE- 127
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
+ I+RD + +NIL+ + K++DFGLA+ + + T + APE +
Sbjct: 128 --RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXT-AREGAKFPIKWTAPEAINY 184
Query: 308 GHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGE--HNLVEWARPQLGERRRFYRLIDPC 365
G T KSDV+SFG++L E++T R N E NL R YR++ P
Sbjct: 185 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-----------ERGYRMVRP- 232
Query: 366 LEGCFSIKGAEKTIQLAASCLNRDQKARP 394
+ C E+ QL C + RP
Sbjct: 233 -DNC-----PEELYQLMRLCWKERPEDRP 255
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 132/301 (43%), Gaps = 35/301 (11%)
Query: 126 ECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHK-EWLAEVNYLGGL 184
E ++G G FG V G + + G + VA+KTL + + ++L+E + +G
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREIF------VAIKTLKSGYTEKQRRDFLSEASIMGQF 65
Query: 185 IHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFL 244
HPN++ L G + +++ EFM GSL++ L + + + A G+ +L
Sbjct: 66 DHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYL 125
Query: 245 HEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMG---TYGYAA 301
A+ ++R NIL++ K+SDFGL++ + T +G + A
Sbjct: 126 ---ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTA 182
Query: 302 PEYVMTGHLTAKSDVYSFGVVLLEMLT-GRRSMDKNRPNGEHNLVEWARPQLGERRRFYR 360
PE + T+ SDV+S+G+V+ E+++ G R N +E + YR
Sbjct: 183 PEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIE----------QDYR 232
Query: 361 LIDPCLEGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPL----PYLKDMASSS 416
L P + QL C +D+ RP+ ++V L + LK MA S
Sbjct: 233 LPPP-------MDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRNPNSLKAMAPLS 285
Query: 417 S 417
S
Sbjct: 286 S 286
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 98/217 (45%), Gaps = 22/217 (10%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLI--H 186
LGEG FG V G KP VAVK L D + L + +I H
Sbjct: 36 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 187 PNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIR--------------M 231
N++ L+G C +D ++ E+ +G+L +L R P L +S +
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 232 KIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVST 291
A A+G+ +L A K I+RD N+L+ + K++DFGLA+D D +T
Sbjct: 154 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 210
Query: 292 RVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ APE + T +SDV+SFGV+L E+ T
Sbjct: 211 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 98/217 (45%), Gaps = 22/217 (10%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLI--H 186
LGEG FG V G KP VAVK L D + L + +I H
Sbjct: 25 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 82
Query: 187 PNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIR--------------M 231
N++ L+G C +D ++ E+ +G+L +L R P L +S +
Sbjct: 83 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 142
Query: 232 KIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVST 291
A A+G+ +L A K I+RD N+L+ + K++DFGLA+D D +T
Sbjct: 143 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 199
Query: 292 RVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ APE + T +SDV+SFGV+L E+ T
Sbjct: 200 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 98/217 (45%), Gaps = 22/217 (10%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLI--H 186
LGEG FG V G KP VAVK L D + L + +I H
Sbjct: 28 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 85
Query: 187 PNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIR--------------M 231
N++ L+G C +D ++ E+ +G+L +L R P L +S +
Sbjct: 86 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 145
Query: 232 KIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVST 291
A A+G+ +L A K I+RD N+L+ + K++DFGLA+D D +T
Sbjct: 146 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 202
Query: 292 RVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ APE + T +SDV+SFGV+L E+ T
Sbjct: 203 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 127/285 (44%), Gaps = 35/285 (12%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHK-EWLAEVNYLGGLIH 186
++G G FG V G + + + VA+KTL + + ++L E + +G H
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEIS------VAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 187 PNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHE 246
PN+++L G + ++V E M GSL++ L + + + A G+ +L
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL-- 163
Query: 247 EAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAK---DGPEGDKTHVSTRVMGTYGYAAPE 303
++ ++RD NIL++ K+SDFGL++ D PE T ++ + +PE
Sbjct: 164 -SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPE 220
Query: 304 YVMTGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPQLGERRRFYRLID 363
+ T+ SDV+S+G+VL E+++ RP E + + + YRL
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSY-----GERPYWEMS----NQDVIKAVDEGYRLPP 271
Query: 364 P--CLEGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPL 406
P C + QL C +D+ RP+ ++V L L
Sbjct: 272 PMDCPAALY---------QLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 98/217 (45%), Gaps = 22/217 (10%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLI--H 186
LGEG FG V G KP VAVK L D + L + +I H
Sbjct: 29 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 86
Query: 187 PNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIR--------------M 231
N++ L+G C +D ++ E+ +G+L +L R P L +S +
Sbjct: 87 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 146
Query: 232 KIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVST 291
A A+G+ +L A K I+RD N+L+ + K++DFGLA+D D +T
Sbjct: 147 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 203
Query: 292 RVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ APE + T +SDV+SFGV+L E+ T
Sbjct: 204 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 98/217 (45%), Gaps = 22/217 (10%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLI--H 186
LGEG FG V G KP VAVK L D + L + +I H
Sbjct: 36 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 187 PNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIR--------------M 231
N++ L+G C +D ++ E+ +G+L +L R P L +S +
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 232 KIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVST 291
A A+G+ +L A K I+RD N+L+ + K++DFGLA+D D +T
Sbjct: 154 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 210
Query: 292 RVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ APE + T +SDV+SFGV+L E+ T
Sbjct: 211 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 127/285 (44%), Gaps = 35/285 (12%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHK-EWLAEVNYLGGLIH 186
++G G FG V G + + + VA+KTL + + ++L E + +G H
Sbjct: 23 VVGAGEFGEVCSGRLKLPSKKEIS------VAIKTLKVGYTEKQRRDFLGEASIMGQFDH 76
Query: 187 PNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHE 246
PN+++L G + ++V E M GSL++ L + + + A G+ +L
Sbjct: 77 PNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL-- 134
Query: 247 EAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAK---DGPEGDKTHVSTRVMGTYGYAAPE 303
++ ++RD NIL++ K+SDFGL++ D PE T ++ + +PE
Sbjct: 135 -SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI--PIRWTSPE 191
Query: 304 YVMTGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPQLGERRRFYRLID 363
+ T+ SDV+S+G+VL E+++ RP E + + + YRL
Sbjct: 192 AIAYRKFTSASDVWSYGIVLWEVMSY-----GERPYWEMS----NQDVIKAVDEGYRLPP 242
Query: 364 P--CLEGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPL 406
P C + QL C +D+ RP+ ++V L L
Sbjct: 243 PMDCPAALY---------QLMLDCWQKDRNNRPKFEQIVSILDKL 278
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 106/225 (47%), Gaps = 17/225 (7%)
Query: 107 QLRKFSFNEL-KSATKSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNH 165
QL+K + L K + F LGEG +G VYK + TG VA+K +
Sbjct: 14 QLKKLDEDSLTKQPEEVFDVLEKLGEGSYGSVYKA---------IHKETGQIVAIKQVPV 64
Query: 166 DGLQGHKEWLAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPL 225
+ +E + E++ + P++VK G ++ +V E+ GS+ + + R+ L
Sbjct: 65 ES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTL 122
Query: 226 PWSIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGD 285
I KGL +LH + I+RD K NILL+ E +AKL+DFG+A G D
Sbjct: 123 TEDEIATILQSTLKGLEYLHFMRK---IHRDIKAGNILLNTEGHAKLADFGVA--GQLTD 177
Query: 286 KTHVSTRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTGR 330
V+GT + APE + +D++S G+ +EM G+
Sbjct: 178 XMAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGK 222
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 123/294 (41%), Gaps = 44/294 (14%)
Query: 122 SFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHK---EWLAEV 178
+FR E +G G F VY+ ++G +PVA+K + L K + + E+
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDG---------VPVALKKVQIFDLMDAKARADCIKEI 83
Query: 179 NYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLE---NHLFRRSLPLPWSIRMKIAL 235
+ L L HPN++K IED++ +V E G L H ++ +P K +
Sbjct: 84 DLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFV 143
Query: 236 DAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMG 295
L +H + V++RD K +N+ + KL D GL + KT + ++G
Sbjct: 144 QLCSALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFF--SSKTTAAHSLVG 198
Query: 296 TYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPQLGER 355
T Y +PE + KSD++S G +L EM P G++
Sbjct: 199 TPYYMSPERIHENGYNFKSDIWSLGCLLYEM------------------AALQSPFYGDK 240
Query: 356 RRFYRLIDPCLEGCF-----SIKGAEKTIQLAASCLNRDQKARPRMSEVVEALK 404
Y L +E C S +E+ QL C+N D + RP ++ V + K
Sbjct: 241 MNLYSLCKK-IEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAK 293
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 96/217 (44%), Gaps = 22/217 (10%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLI--H 186
LGEG FG V G KP VAVK L D + L + +I H
Sbjct: 21 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 78
Query: 187 PNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP---------------LPWSIRM 231
N++ L+G C +D ++ E+ +G+L +L R P L +
Sbjct: 79 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 138
Query: 232 KIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVST 291
A A+G+ +L A K I+RD N+L+ + K++DFGLA+D D +T
Sbjct: 139 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 195
Query: 292 RVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ APE + T +SDV+SFGV+L E+ T
Sbjct: 196 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 95/203 (46%), Gaps = 11/203 (5%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG+G FG V + + TG VAVK L H G +++ E+ L L
Sbjct: 15 LGKGNFGSV-----ELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDF 69
Query: 189 LVKLIGCCIE--DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHE 246
+VK G + LV E++P G L + L R L S + + KG+ +L
Sbjct: 70 IVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL-- 127
Query: 247 EAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGP-EGDKTHVSTRVMGTYGYAAPEYV 305
+ ++RD NIL++ E + K++DFGLAK P + D V + APE +
Sbjct: 128 -GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESL 186
Query: 306 MTGHLTAKSDVYSFGVVLLEMLT 328
+ +SDV+SFGVVL E+ T
Sbjct: 187 SDNIFSRQSDVWSFGVVLYELFT 209
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 101/226 (44%), Gaps = 25/226 (11%)
Query: 112 SFNELKSATKSFRPECL------LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNH 165
S + + T+ PE LG+G FG VYK T + A K ++
Sbjct: 22 SMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKA---------QNKETSVLAAAKVIDT 72
Query: 166 DGLQGHKEWLAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPL 225
+ ++++ E++ L HPN+VKL+ ++ ++ EF G+++ + PL
Sbjct: 73 KSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPL 132
Query: 226 PWSIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGD 285
S + L +LH + +I+RD K NIL + + KL+DFG++
Sbjct: 133 TESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI 189
Query: 286 KTHVSTRVMGTYGYAAPEYVMTGH-----LTAKSDVYSFGVVLLEM 326
+ S +GT + APE VM K+DV+S G+ L+EM
Sbjct: 190 QRRDS--FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 95/211 (45%), Gaps = 18/211 (8%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWL-AEVNYLGGL-IH 186
LG G FG V + K L VAVK L KE L +E+ + L H
Sbjct: 54 LGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 187 PNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRS---------LPLPWSIRMKIALDA 237
N+V L+G C L++ E+ G L N L R++ PL + +
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQV 169
Query: 238 AKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY 297
A+G+AFL A K I+RD N+LL + AK+ DFGLA+D V
Sbjct: 170 AQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 226
Query: 298 GYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ APE + T +SDV+S+G++L E+ +
Sbjct: 227 KWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 101/203 (49%), Gaps = 20/203 (9%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG G FG V+ G+ N N T VAVKTL G + +L E N + L H
Sbjct: 21 LGAGQFGEVWMGYYN-NSTK---------VAVKTLKP-GTMSVQAFLEEANLMKTLQHDK 69
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRS---LPLPWSIRMKIALDAAKGLAFLH 245
LV+L ++ ++ E+M +GSL + L + LP I + A+G+A++
Sbjct: 70 LVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQI--AEGMAYIE 127
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV 305
K I+RD + +N+L+ K++DFGLA+ + + T + APE +
Sbjct: 128 R---KNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPI-KWTAPEAI 183
Query: 306 MTGHLTAKSDVYSFGVVLLEMLT 328
G T KSDV+SFG++L E++T
Sbjct: 184 NFGCFTIKSDVWSFGILLYEIVT 206
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 101/226 (44%), Gaps = 25/226 (11%)
Query: 112 SFNELKSATKSFRPECL------LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNH 165
S + + T+ PE LG+G FG VYK T + A K ++
Sbjct: 22 SMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKA---------QNKETSVLAAAKVIDT 72
Query: 166 DGLQGHKEWLAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPL 225
+ ++++ E++ L HPN+VKL+ ++ ++ EF G+++ + PL
Sbjct: 73 KSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPL 132
Query: 226 PWSIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGD 285
S + L +LH + +I+RD K NIL + + KL+DFG++
Sbjct: 133 TESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXI 189
Query: 286 KTHVSTRVMGTYGYAAPEYVMTGH-----LTAKSDVYSFGVVLLEM 326
+ S +GT + APE VM K+DV+S G+ L+EM
Sbjct: 190 QRRDS--FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 98/217 (45%), Gaps = 22/217 (10%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLI--H 186
LGEG FG V G KP VAVK L D + L + +I H
Sbjct: 77 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 134
Query: 187 PNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIR--------------M 231
N++ L+G C +D ++ E+ +G+L +L R P L +S +
Sbjct: 135 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 194
Query: 232 KIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVST 291
A A+G+ +L A K I+RD N+L+ + K++DFGLA+D D +T
Sbjct: 195 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 251
Query: 292 RVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ APE + T +SDV+SFGV+L E+ T
Sbjct: 252 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 95/211 (45%), Gaps = 18/211 (8%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWL-AEVNYLGGL-IH 186
LG G FG V + K L VAVK L KE L +E+ + L H
Sbjct: 46 LGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 101
Query: 187 PNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRS---------LPLPWSIRMKIALDA 237
N+V L+G C L++ E+ G L N L R++ PL + +
Sbjct: 102 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQV 161
Query: 238 AKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY 297
A+G+AFL A K I+RD N+LL + AK+ DFGLA+D V
Sbjct: 162 AQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 218
Query: 298 GYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ APE + T +SDV+S+G++L E+ +
Sbjct: 219 KWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 104/205 (50%), Gaps = 24/205 (11%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG G FG V+ G+ N N T VAVKTL G + +L E N + L H
Sbjct: 20 LGAGQFGEVWMGYYN-NSTK---------VAVKTLK-PGTMSVQAFLEEANLMKTLQHDK 68
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRS---LPLPWSIRMKIALDAAKGLAFLH 245
LV+L +++ ++ EFM +GSL + L + LP I + A+G+A++
Sbjct: 69 LVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQI--AEGMAYIE 126
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY--GYAAPE 303
K I+RD + +N+L+ K++DFGLA+ + + T R + + APE
Sbjct: 127 R---KNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYT---AREGAKFPIKWTAPE 180
Query: 304 YVMTGHLTAKSDVYSFGVVLLEMLT 328
+ G T KS+V+SFG++L E++T
Sbjct: 181 AINFGCFTIKSNVWSFGILLYEIVT 205
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 99/210 (47%), Gaps = 27/210 (12%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDG-----LQGHKEWLAEVNYLGG 183
+G G FG VYKG +G VAVK LN LQ K EV L
Sbjct: 43 IGSGSFGTVYKG--KWHGD----------VAVKMLNVTAPTPQQLQAFKN---EVGVLRK 87
Query: 184 LIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAF 243
H N++ +G + Q +V ++ SL +HL + IA A+G+ +
Sbjct: 88 TRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDY 146
Query: 244 LHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 303
LH K +I+RD K++NI L + K+ DFGLA +H ++ G+ + APE
Sbjct: 147 LHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 203
Query: 304 YVMTGH---LTAKSDVYSFGVVLLEMLTGR 330
+ + +SDVY+FG+VL E++TG+
Sbjct: 204 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 233
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 99/210 (47%), Gaps = 27/210 (12%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDG-----LQGHKEWLAEVNYLGG 183
+G G FG VYKG +G VAVK LN LQ K EV L
Sbjct: 44 IGSGSFGTVYKG--KWHGD----------VAVKMLNVTAPTPQQLQAFKN---EVGVLRK 88
Query: 184 LIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAF 243
H N++ +G + Q +V ++ SL +HL + IA A+G+ +
Sbjct: 89 TRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDY 147
Query: 244 LHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 303
LH K +I+RD K++NI L + K+ DFGLA +H ++ G+ + APE
Sbjct: 148 LHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 204
Query: 304 YVMTGH---LTAKSDVYSFGVVLLEMLTGR 330
+ + +SDVY+FG+VL E++TG+
Sbjct: 205 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 128/290 (44%), Gaps = 35/290 (12%)
Query: 123 FRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHK-EWLAEVNYL 181
+ E ++G G FG V G + + G V VA+KTL + + ++L E + +
Sbjct: 45 IKIERVIGAGEFGEVCSGRLKLPGKRDV------AVAIKTLKVGYTEKQRRDFLCEASIM 98
Query: 182 GGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGL 241
G HPN+V L G ++V EFM G+L+ L + + + A G+
Sbjct: 99 GQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGM 158
Query: 242 AFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAK---DGPEGDKTHVSTRVMGTYG 298
+L A+ ++RD NIL++ K+SDFGL++ D PE T ++
Sbjct: 159 RYL---ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKI--PVR 213
Query: 299 YAAPEYVMTGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPQLGERRRF 358
+ APE + T+ SDV+S+G+V+ E+++ RP + + + +
Sbjct: 214 WTAPEAIQYRKFTSASDVWSYGIVMWEVMSY-----GERPYWDMS----NQDVIKAIEEG 264
Query: 359 YRLIDP--CLEGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPL 406
YRL P C G QL C +++ RP+ ++V L +
Sbjct: 265 YRLPAPMDCPAGLH---------QLMLDCWQKERAERPKFEQIVGILDKM 305
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 96/217 (44%), Gaps = 22/217 (10%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLI--H 186
LGEG FG V G KP + VAVK L D + L + +I H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 187 PNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP---------------LPWSIRM 231
N++ L+G C +D ++ E+ +G+L +L R P + + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLV 160
Query: 232 KIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVST 291
A+G+ +L A + I+RD N+L+ K++DFGLA+D D +T
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTT 217
Query: 292 RVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ APE + T +SDV+SFGV++ E+ T
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 105/205 (51%), Gaps = 16/205 (7%)
Query: 128 LLGEGGFGCVYKG-WINMNGTATVKPGTGLPVAVKTLNHD-GLQGHKEWLAEVNYLGGLI 185
+LG G FG VYKG WI +G +PVA+K L + + +KE L E + G+
Sbjct: 24 VLGSGAFGTVYKGIWIP-DGE-----NVKIPVAIKVLRENTSPKANKEILDEAYVMAGVG 77
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLH 245
P + +L+G C+ +L V + MP G L +H+ L + + AKG+++L
Sbjct: 78 SPYVSRLLGICLTSTVQL-VTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLE 136
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAK--DGPEGDKTHVSTRVMGTYGYAAPE 303
+ +++RD N+L+ + K++DFGLA+ D E + +V + A E
Sbjct: 137 DVR---LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKV--PIKWMALE 191
Query: 304 YVMTGHLTAKSDVYSFGVVLLEMLT 328
++ T +SDV+S+GV + E++T
Sbjct: 192 SILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 96/217 (44%), Gaps = 22/217 (10%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLI--H 186
LGEG FG V G KP VAVK L D + L + +I H
Sbjct: 36 LGEGAFGQVVLA--EAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKH 93
Query: 187 PNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP---------------LPWSIRM 231
N++ L+G C +D ++ E+ +G+L +L R P L +
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 153
Query: 232 KIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVST 291
A A+G+ +L A K I+RD N+L+ + K++DFGLA+D D +T
Sbjct: 154 SCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT 210
Query: 292 RVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ APE + T +SDV+SFGV+L E+ T
Sbjct: 211 NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 99/210 (47%), Gaps = 27/210 (12%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDG-----LQGHKEWLAEVNYLGG 183
+G G FG VYKG +G VAVK LN LQ K EV L
Sbjct: 18 IGSGSFGTVYKG--KWHGD----------VAVKMLNVTAPTPQQLQAFKN---EVGVLRK 62
Query: 184 LIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAF 243
H N++ +G + Q +V ++ SL +HL + IA A+G+ +
Sbjct: 63 TRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDY 121
Query: 244 LHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 303
LH K +I+RD K++NI L + K+ DFGLA +H ++ G+ + APE
Sbjct: 122 LHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 178
Query: 304 YVMTGH---LTAKSDVYSFGVVLLEMLTGR 330
+ + +SDVY+FG+VL E++TG+
Sbjct: 179 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 208
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 96/217 (44%), Gaps = 22/217 (10%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLI--H 186
LGEG FG V G KP + VAVK L D + L + +I H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 187 PNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP---------------LPWSIRM 231
N++ L+G C +D ++ E+ +G+L +L R P + + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 232 KIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVST 291
A+G+ +L A + I+RD N+L+ K++DFGLA+D D +T
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTT 217
Query: 292 RVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ APE + T +SDV+SFGV++ E+ T
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 99/210 (47%), Gaps = 27/210 (12%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDG-----LQGHKEWLAEVNYLGG 183
+G G FG VYKG +G VAVK LN LQ K EV L
Sbjct: 21 IGSGSFGTVYKG--KWHGD----------VAVKMLNVTAPTPQQLQAFKN---EVGVLRK 65
Query: 184 LIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAF 243
H N++ +G + Q +V ++ SL +HL + IA A+G+ +
Sbjct: 66 TRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDY 124
Query: 244 LHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 303
LH K +I+RD K++NI L + K+ DFGLA +H ++ G+ + APE
Sbjct: 125 LHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 181
Query: 304 YVMTGH---LTAKSDVYSFGVVLLEMLTGR 330
+ + +SDVY+FG+VL E++TG+
Sbjct: 182 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 140/325 (43%), Gaps = 51/325 (15%)
Query: 101 ELKISPQLRKFSFNELKSATKSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGL-PVA 159
E+ + Q ++ E+ + F E LGE FG VYKG ++ G A PG VA
Sbjct: 8 EMPLINQHKQAKLKEISLSAVRFMEE--LGEDRFGKVYKG--HLFGPA---PGEQTQAVA 60
Query: 160 VKTLNHDGLQG--HKEWLAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENH 217
+KTL D +G +E+ E L HPN+V L+G +D +++ + G L
Sbjct: 61 IKTLK-DKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEF 119
Query: 218 LFRRSLPLPWSI--------RMKIALD----------AAKGLAFLHEEAEKPVIYRDFKT 259
L RS P S +K AL+ A G+ +L + V+++D T
Sbjct: 120 LVMRS---PHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLAT 173
Query: 260 SNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTAKSDVYSF 319
N+L+ + N K+SD GL ++ D + + + APE +M G + SD++S+
Sbjct: 174 RNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSY 233
Query: 320 GVVLLEMLTGRRSMDKNRPNGEHNLVEWARPQLGERRRFYRLIDPCLEGCFSIKGAEKTI 379
GVVL E+ + + ++VE R R + PC + C + A
Sbjct: 234 GVVLWEVFS--YGLQPYCGYSNQDVVEMIRN---------RQVLPCPDDCPAWVYA---- 278
Query: 380 QLAASCLNRDQKARPRMSEVVEALK 404
L C N RPR ++ L+
Sbjct: 279 -LMIECWNEFPSRRPRFKDIHSRLR 302
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 99/210 (47%), Gaps = 27/210 (12%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDG-----LQGHKEWLAEVNYLGG 183
+G G FG VYKG +G VAVK LN LQ K EV L
Sbjct: 21 IGSGSFGTVYKG--KWHGD----------VAVKMLNVTAPTPQQLQAFKN---EVGVLRK 65
Query: 184 LIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAF 243
H N++ +G + Q +V ++ SL +HL + IA A+G+ +
Sbjct: 66 TRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDY 124
Query: 244 LHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 303
LH K +I+RD K++NI L + K+ DFGLA +H ++ G+ + APE
Sbjct: 125 LHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 181
Query: 304 YVMTGH---LTAKSDVYSFGVVLLEMLTGR 330
+ + +SDVY+FG+VL E++TG+
Sbjct: 182 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 99/210 (47%), Gaps = 27/210 (12%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDG-----LQGHKEWLAEVNYLGG 183
+G G FG VYKG +G VAVK LN LQ K EV L
Sbjct: 16 IGSGSFGTVYKG--KWHGD----------VAVKMLNVTAPTPQQLQAFKN---EVGVLRK 60
Query: 184 LIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAF 243
H N++ +G + Q +V ++ SL +HL + IA A+G+ +
Sbjct: 61 TRHVNILLFMGYSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDY 119
Query: 244 LHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 303
LH K +I+RD K++NI L + K+ DFGLA +H ++ G+ + APE
Sbjct: 120 LHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 176
Query: 304 YVMTGH---LTAKSDVYSFGVVLLEMLTGR 330
+ + +SDVY+FG+VL E++TG+
Sbjct: 177 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 99/215 (46%), Gaps = 19/215 (8%)
Query: 117 KSATKSFRPECLLGEGGFGCVYKGWINMNG--TATVKPGTGLPVAVKTLNHDGLQGHKEW 174
K + + F+ LG G FG V+ NG A + V +K + H
Sbjct: 2 KYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTN------- 54
Query: 175 LAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 234
E L + HP ++++ G + Q ++ +++ G L + L R+S P + A
Sbjct: 55 -DERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFS-LLRKSQRFPNPVAKFYA 112
Query: 235 LDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVM 294
+ L +LH K +IYRD K NILLD + K++DFG AK P+ V+ +
Sbjct: 113 AEVCLALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD-----VTYXLC 164
Query: 295 GTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
GT Y APE V T D +SFG+++ EML G
Sbjct: 165 GTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAG 199
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 99/226 (43%), Gaps = 25/226 (11%)
Query: 112 SFNELKSATKSFRPECL------LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNH 165
S + + T+ PE LG+G FG VYK T + A K ++
Sbjct: 22 SMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKA---------QNKETSVLAAAKVIDT 72
Query: 166 DGLQGHKEWLAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPL 225
+ ++++ E++ L HPN+VKL+ ++ ++ EF G+++ + PL
Sbjct: 73 KSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPL 132
Query: 226 PWSIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGD 285
S + L +LH + +I+RD K NIL + + KL+DFG++
Sbjct: 133 TESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTR-- 187
Query: 286 KTHVSTRVMGTYGYAAPEYVMTGH-----LTAKSDVYSFGVVLLEM 326
+GT + APE VM K+DV+S G+ L+EM
Sbjct: 188 XIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 98/210 (46%), Gaps = 27/210 (12%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDG-----LQGHKEWLAEVNYLGG 183
+G G FG VYKG +G VAVK LN LQ K EV L
Sbjct: 16 IGSGSFGTVYKG--KWHGD----------VAVKMLNVTAPTPQQLQAFKN---EVGVLRK 60
Query: 184 LIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAF 243
H N++ +G Q +V ++ SL +HL + IA A+G+ +
Sbjct: 61 TRHVNILLFMGYSTAP-QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDY 119
Query: 244 LHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 303
LH K +I+RD K++NI L + K+ DFGLA +H ++ G+ + APE
Sbjct: 120 LHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 176
Query: 304 YVMTGH---LTAKSDVYSFGVVLLEMLTGR 330
+ + +SDVY+FG+VL E++TG+
Sbjct: 177 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 94/215 (43%), Gaps = 22/215 (10%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWL-AEVNYLGGL-IH 186
LG G FG V + K L VAVK L KE L +E+ + L H
Sbjct: 54 LGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 187 PNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA------------ 234
N+V L+G C L++ E+ G L N L R+S L IA
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHF 169
Query: 235 -LDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRV 293
A+G+AFL A K I+RD N+LL + AK+ DFGLA+D V
Sbjct: 170 SSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 226
Query: 294 MGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ APE + T +SDV+S+G++L E+ +
Sbjct: 227 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 96/217 (44%), Gaps = 22/217 (10%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLI--H 186
LGEG FG V G KP + VAVK L D + L + +I H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKH 100
Query: 187 PNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP---------------LPWSIRM 231
N++ L+G C +D ++ E+ +G+L +L R P + + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 232 KIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVST 291
A+G+ +L A + I+RD N+L+ K++DFGLA+D D +T
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 292 RVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ APE + T +SDV+SFGV++ E+ T
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 96/217 (44%), Gaps = 22/217 (10%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLI--H 186
LGEG FG V G KP + VAVK L D + L + +I H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 187 PNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP---------------LPWSIRM 231
N++ L+G C +D ++ E+ +G+L +L R P + + +
Sbjct: 101 KNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 232 KIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVST 291
A+G+ +L A + I+RD N+L+ K++DFGLA+D D +T
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 292 RVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ APE + T +SDV+SFGV++ E+ T
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 96/217 (44%), Gaps = 22/217 (10%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLI--H 186
LGEG FG V G KP + VAVK L D + L + +I H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 187 PNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP---------------LPWSIRM 231
N++ L+G C +D ++ E+ +G+L +L R P + + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 232 KIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVST 291
A+G+ +L A + I+RD N+L+ K++DFGLA+D D +T
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTT 217
Query: 292 RVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ APE + T +SDV+SFGV++ E+ T
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 94/215 (43%), Gaps = 22/215 (10%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWL-AEVNYLGGL-IH 186
LG G FG V + K L VAVK L KE L +E+ + L H
Sbjct: 54 LGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 187 PNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA------------ 234
N+V L+G C L++ E+ G L N L R+S L IA
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHF 169
Query: 235 -LDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRV 293
A+G+AFL A K I+RD N+LL + AK+ DFGLA+D V
Sbjct: 170 SSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 226
Query: 294 MGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ APE + T +SDV+S+G++L E+ +
Sbjct: 227 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 96/217 (44%), Gaps = 22/217 (10%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLI--H 186
LGEG FG V G KP + VAVK L D + L + +I H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 187 PNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP---------------LPWSIRM 231
N++ L+G C +D ++ E+ +G+L +L R P + + +
Sbjct: 101 KNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 232 KIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVST 291
A+G+ +L A + I+RD N+L+ K++DFGLA+D D +T
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 292 RVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ APE + T +SDV+SFGV++ E+ T
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 105/208 (50%), Gaps = 12/208 (5%)
Query: 123 FRPECLLGEGGFGCVYKG-WINMNGTATVKPGTGLPVAVKTLNH-DGLQGHKEWLAEVNY 180
F+ +LG G FG VYKG WI + PVA+K L + +KE L E
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEILDEAYV 74
Query: 181 LGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
+ + +P++ +L+G C+ +L++ + MP G L +++ + + + AKG
Sbjct: 75 MASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 133
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
+ +L + + +++RD N+L+ + K++DFGLAK +K + + +
Sbjct: 134 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 190
Query: 301 APEYVMTGHLTAKSDVYSFGVVLLEMLT 328
A E ++ T +SDV+S+GV + E++T
Sbjct: 191 ALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 96/217 (44%), Gaps = 22/217 (10%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLI--H 186
LGEG FG V G KP + VAVK L D + L + +I H
Sbjct: 89 LGEGCFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 146
Query: 187 PNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP---------------LPWSIRM 231
N++ L+G C +D ++ E+ +G+L +L R P + + +
Sbjct: 147 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 206
Query: 232 KIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVST 291
A+G+ +L A + I+RD N+L+ K++DFGLA+D D +T
Sbjct: 207 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 263
Query: 292 RVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ APE + T +SDV+SFGV++ E+ T
Sbjct: 264 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 122/312 (39%), Gaps = 50/312 (16%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAE----VNYLGGL 184
LG G FG V + +K + VAVK L +E L ++YLG
Sbjct: 54 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN- 108
Query: 185 IHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWS---------------- 228
H N+V L+G C L++ E+ G L N L R+ S
Sbjct: 109 -HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 167
Query: 229 -IRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKT 287
+ + AKG+AFL A K I+RD NILL K+ DFGLA+D
Sbjct: 168 EDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNY 224
Query: 288 HVSTRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEW 347
V + APE + T +SDV+S+G+ L E+ + S
Sbjct: 225 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSS--------------- 269
Query: 348 ARPQLGERRRFYRLIDPCLEGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPLP 407
P + +FY++I + + +C + D RP ++V+ ++
Sbjct: 270 PYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE--- 326
Query: 408 YLKDMASSSSYV 419
K ++ S++++
Sbjct: 327 --KQISESTNHI 336
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 122/312 (39%), Gaps = 50/312 (16%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAE----VNYLGGL 184
LG G FG V + +K + VAVK L +E L ++YLG
Sbjct: 47 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN- 101
Query: 185 IHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWS---------------- 228
H N+V L+G C L++ E+ G L N L R+ S
Sbjct: 102 -HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 160
Query: 229 -IRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKT 287
+ + AKG+AFL A K I+RD NILL K+ DFGLA+D
Sbjct: 161 EDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNY 217
Query: 288 HVSTRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEW 347
V + APE + T +SDV+S+G+ L E+ + S
Sbjct: 218 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSS--------------- 262
Query: 348 ARPQLGERRRFYRLIDPCLEGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPLP 407
P + +FY++I + + +C + D RP ++V+ ++
Sbjct: 263 PYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE--- 319
Query: 408 YLKDMASSSSYV 419
K ++ S++++
Sbjct: 320 --KQISESTNHI 329
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 100/215 (46%), Gaps = 14/215 (6%)
Query: 117 KSATKSFRPECLLGEGGFGCVY--KGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEW 174
K+ F +LG+G FG V+ K + +K + + ++
Sbjct: 20 KADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDI 79
Query: 175 LAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 234
L EVN HP +VKL + + L+ +F+ G L L + + ++ +A
Sbjct: 80 LVEVN------HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA 133
Query: 235 LDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVM 294
+ A L LH +IYRD K NILLD E + KL+DFGL+K+ + +K S
Sbjct: 134 -ELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FC 187
Query: 295 GTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
GT Y APE V T +D +SFGV++ EMLTG
Sbjct: 188 GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 122/312 (39%), Gaps = 50/312 (16%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAE----VNYLGGL 184
LG G FG V + +K + VAVK L +E L ++YLG
Sbjct: 49 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN- 103
Query: 185 IHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWS---------------- 228
H N+V L+G C L++ E+ G L N L R+ S
Sbjct: 104 -HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 162
Query: 229 -IRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKT 287
+ + AKG+AFL A K I+RD NILL K+ DFGLA+D
Sbjct: 163 EDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNY 219
Query: 288 HVSTRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEW 347
V + APE + T +SDV+S+G+ L E+ + S
Sbjct: 220 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSS--------------- 264
Query: 348 ARPQLGERRRFYRLIDPCLEGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPLP 407
P + +FY++I + + +C + D RP ++V+ ++
Sbjct: 265 PYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE--- 321
Query: 408 YLKDMASSSSYV 419
K ++ S++++
Sbjct: 322 --KQISESTNHI 331
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 105/208 (50%), Gaps = 12/208 (5%)
Query: 123 FRPECLLGEGGFGCVYKG-WINMNGTATVKPGTGLPVAVKTLNH-DGLQGHKEWLAEVNY 180
F+ +LG G FG VYKG WI + PVA+K L + +KE L E
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEILDEAYV 72
Query: 181 LGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
+ + +P++ +L+G C+ +L++ + MP G L +++ + + + AKG
Sbjct: 73 MASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 131
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
+ +L + + +++RD N+L+ + K++DFGLAK +K + + +
Sbjct: 132 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 301 APEYVMTGHLTAKSDVYSFGVVLLEMLT 328
A E ++ T +SDV+S+GV + E++T
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 105/208 (50%), Gaps = 12/208 (5%)
Query: 123 FRPECLLGEGGFGCVYKG-WINMNGTATVKPGTGLPVAVKTLNH-DGLQGHKEWLAEVNY 180
F+ +LG G FG VYKG WI + PVA+K L + +KE L E
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEILDEAYV 71
Query: 181 LGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
+ + +P++ +L+G C+ +L++ + MP G L +++ + + + AKG
Sbjct: 72 MASVDNPHVCRLLGICLTSTVQLIM-QLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKG 130
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
+ +L + + +++RD N+L+ + K++DFGLAK +K + + +
Sbjct: 131 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 187
Query: 301 APEYVMTGHLTAKSDVYSFGVVLLEMLT 328
A E ++ T +SDV+S+GV + E++T
Sbjct: 188 ALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 105/208 (50%), Gaps = 12/208 (5%)
Query: 123 FRPECLLGEGGFGCVYKG-WINMNGTATVKPGTGLPVAVKTLNH-DGLQGHKEWLAEVNY 180
F+ +LG G FG VYKG WI + PVA+K L + +KE L E
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEILDEAYV 70
Query: 181 LGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
+ + +P++ +L+G C+ +L++ + MP G L +++ + + + AKG
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 129
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
+ +L + + +++RD N+L+ + K++DFGLAK +K + + +
Sbjct: 130 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 301 APEYVMTGHLTAKSDVYSFGVVLLEMLT 328
A E ++ T +SDV+S+GV + E++T
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 105/208 (50%), Gaps = 12/208 (5%)
Query: 123 FRPECLLGEGGFGCVYKG-WINMNGTATVKPGTGLPVAVKTLNH-DGLQGHKEWLAEVNY 180
F+ +LG G FG VYKG WI + PVA+K L + +KE L E
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEILDEAYV 71
Query: 181 LGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
+ + +P++ +L+G C+ +L++ + MP G L +++ + + + AKG
Sbjct: 72 MASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 130
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
+ +L + + +++RD N+L+ + K++DFGLAK +K + + +
Sbjct: 131 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 187
Query: 301 APEYVMTGHLTAKSDVYSFGVVLLEMLT 328
A E ++ T +SDV+S+GV + E++T
Sbjct: 188 ALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 105/208 (50%), Gaps = 12/208 (5%)
Query: 123 FRPECLLGEGGFGCVYKG-WINMNGTATVKPGTGLPVAVKTLNH-DGLQGHKEWLAEVNY 180
F+ +LG G FG VYKG WI + PVA+K L + +KE L E
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEILDEAYV 73
Query: 181 LGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
+ + +P++ +L+G C+ +L++ + MP G L +++ + + + AKG
Sbjct: 74 MASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 132
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
+ +L + + +++RD N+L+ + K++DFGLAK +K + + +
Sbjct: 133 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 301 APEYVMTGHLTAKSDVYSFGVVLLEMLT 328
A E ++ T +SDV+S+GV + E++T
Sbjct: 190 ALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 96/217 (44%), Gaps = 22/217 (10%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLI--H 186
LGEG FG V G KP + VAVK L D + L + +I H
Sbjct: 30 LGEGCFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 87
Query: 187 PNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP---------------LPWSIRM 231
N++ L+G C +D ++ E+ +G+L +L R P + + +
Sbjct: 88 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 147
Query: 232 KIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVST 291
A+G+ +L A + I+RD N+L+ K++DFGLA+D D +T
Sbjct: 148 SCTYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTT 204
Query: 292 RVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ APE + T +SDV+SFGV++ E+ T
Sbjct: 205 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 122/312 (39%), Gaps = 50/312 (16%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAE----VNYLGGL 184
LG G FG V + +K + VAVK L +E L ++YLG
Sbjct: 31 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN- 85
Query: 185 IHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWS---------------- 228
H N+V L+G C L++ E+ G L N L R+ S
Sbjct: 86 -HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 144
Query: 229 -IRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKT 287
+ + AKG+AFL A K I+RD NILL K+ DFGLA+D
Sbjct: 145 EDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNY 201
Query: 288 HVSTRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEW 347
V + APE + T +SDV+S+G+ L E+ + S
Sbjct: 202 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSS--------------- 246
Query: 348 ARPQLGERRRFYRLIDPCLEGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPLP 407
P + +FY++I + + +C + D RP ++V+ ++
Sbjct: 247 PYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE--- 303
Query: 408 YLKDMASSSSYV 419
K ++ S++++
Sbjct: 304 --KQISESTNHI 313
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 103/217 (47%), Gaps = 18/217 (8%)
Query: 117 KSATKSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPV----AVKTLNHDGLQGHK 172
K+ F +LG+G FG V+ + + + + V +K + + +
Sbjct: 20 KADPSQFELLKVLGQGSFGKVF--LVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMER 77
Query: 173 EWLAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 232
+ L EVN HP +VKL + + L+ +F+ G L L + + ++
Sbjct: 78 DILVEVN------HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFY 131
Query: 233 IALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTR 292
+A + A L LH +IYRD K NILLD E + KL+DFGL+K+ + +K S
Sbjct: 132 LA-ELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS-- 185
Query: 293 VMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
GT Y APE V T +D +SFGV++ EMLTG
Sbjct: 186 FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 104/208 (50%), Gaps = 12/208 (5%)
Query: 123 FRPECLLGEGGFGCVYKG-WINMNGTATVKPGTGLPVAVKTLNH-DGLQGHKEWLAEVNY 180
F+ +LG G FG VYKG WI + PVA+K L + +KE L E
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEILDEAYV 77
Query: 181 LGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
+ + +P++ +L+G C+ +L+ + MP G L +++ + + + AKG
Sbjct: 78 MASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 136
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
+ +L + + +++RD N+L+ + K++DFGLAK +K + + +
Sbjct: 137 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 193
Query: 301 APEYVMTGHLTAKSDVYSFGVVLLEMLT 328
A E ++ T +SDV+S+GV + E++T
Sbjct: 194 ALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 104/208 (50%), Gaps = 12/208 (5%)
Query: 123 FRPECLLGEGGFGCVYKG-WINMNGTATVKPGTGLPVAVKTLNH-DGLQGHKEWLAEVNY 180
F+ +LG G FG VYKG WI + PVA+K L + +KE L E
Sbjct: 27 FKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEILDEAYV 80
Query: 181 LGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
+ + +P++ +L+G C+ +L+ + MP G L +++ + + + AKG
Sbjct: 81 MASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 139
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
+ +L + + +++RD N+L+ + K++DFGLAK +K + + +
Sbjct: 140 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 196
Query: 301 APEYVMTGHLTAKSDVYSFGVVLLEMLT 328
A E ++ T +SDV+S+GV + E++T
Sbjct: 197 ALESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 103/217 (47%), Gaps = 18/217 (8%)
Query: 117 KSATKSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPV----AVKTLNHDGLQGHK 172
K+ F +LG+G FG V+ + + + + V +K + + +
Sbjct: 21 KADPSQFELLKVLGQGSFGKVF--LVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMER 78
Query: 173 EWLAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 232
+ L EVN HP +VKL + + L+ +F+ G L L + + ++
Sbjct: 79 DILVEVN------HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFY 132
Query: 233 IALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTR 292
+A + A L LH +IYRD K NILLD E + KL+DFGL+K+ + +K S
Sbjct: 133 LA-ELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS-- 186
Query: 293 VMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
GT Y APE V T +D +SFGV++ EMLTG
Sbjct: 187 FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 96/217 (44%), Gaps = 22/217 (10%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLI--H 186
LGEG FG V G KP + VAVK L D + L + +I H
Sbjct: 32 LGEGCFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 89
Query: 187 PNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP---------------LPWSIRM 231
N++ L+G C +D ++ E+ +G+L +L R P + + +
Sbjct: 90 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 149
Query: 232 KIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVST 291
A+G+ +L A + I+RD N+L+ K++DFGLA+D D +T
Sbjct: 150 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 206
Query: 292 RVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ APE + T +SDV+SFGV++ E+ T
Sbjct: 207 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 104/208 (50%), Gaps = 12/208 (5%)
Query: 123 FRPECLLGEGGFGCVYKG-WINMNGTATVKPGTGLPVAVKTLNH-DGLQGHKEWLAEVNY 180
F+ +LG G FG VYKG WI + PVA+K L + +KE L E
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEILDEAYV 72
Query: 181 LGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
+ + +P++ +L+G C+ +L+ + MP G L +++ + + + AKG
Sbjct: 73 MASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 131
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
+ +L + + +++RD N+L+ + K++DFGLAK +K + + +
Sbjct: 132 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 301 APEYVMTGHLTAKSDVYSFGVVLLEMLT 328
A E ++ T +SDV+S+GV + E++T
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 95/203 (46%), Gaps = 19/203 (9%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG+G FG VYK TG A K + + ++++ E+ L HP
Sbjct: 27 LGDGAFGKVYKA---------KNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPY 77
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEEA 248
+VKL+G D + ++ EF P G+++ + L + + L FLH
Sbjct: 78 IVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH--- 134
Query: 249 EKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG 308
K +I+RD K N+L+ E + +L+DFG++ + + S +GT + APE VM
Sbjct: 135 SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS--FIGTPYWMAPEVVMCE 192
Query: 309 HLTA-----KSDVYSFGVVLLEM 326
+ K+D++S G+ L+EM
Sbjct: 193 TMKDTPYDYKADIWSLGITLIEM 215
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 96/217 (44%), Gaps = 22/217 (10%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLI--H 186
LGEG FG V G KP + VAVK L D + L + +I H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 187 PNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP---------------LPWSIRM 231
N++ L+G C +D ++ E+ +G+L +L R P + + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 232 KIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVST 291
A+G+ +L A + I+RD N+L+ +++DFGLA+D D +T
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTT 217
Query: 292 RVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ APE + T +SDV+SFGV++ E+ T
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 104/208 (50%), Gaps = 12/208 (5%)
Query: 123 FRPECLLGEGGFGCVYKG-WINMNGTATVKPGTGLPVAVKTLNH-DGLQGHKEWLAEVNY 180
F+ +LG G FG VYKG WI + PVA+K L + +KE L E
Sbjct: 23 FKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEILDEAYV 76
Query: 181 LGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
+ + +P++ +L+G C+ +L+ + MP G L +++ + + + AKG
Sbjct: 77 MASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 135
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
+ +L + + +++RD N+L+ + K++DFGLAK +K + + +
Sbjct: 136 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 192
Query: 301 APEYVMTGHLTAKSDVYSFGVVLLEMLT 328
A E ++ T +SDV+S+GV + E++T
Sbjct: 193 ALESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 96/217 (44%), Gaps = 22/217 (10%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLI--H 186
LGEG FG V G KP + VAVK L D + L + +I H
Sbjct: 35 LGEGCFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 92
Query: 187 PNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP---------------LPWSIRM 231
N++ L+G C +D ++ E+ +G+L +L R P + + +
Sbjct: 93 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 152
Query: 232 KIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVST 291
A+G+ +L A + I+RD N+L+ K++DFGLA+D D +T
Sbjct: 153 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 209
Query: 292 RVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ APE + T +SDV+SFGV++ E+ T
Sbjct: 210 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 103/207 (49%), Gaps = 27/207 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
+G+G FG V G G VAVK + +D + +LAE + + L H N
Sbjct: 20 IGKGEFGDVMLG-----------DYRGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSN 66
Query: 189 LVKLIGCCIEDDQRL-LVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALDAAKGLAFLHE 246
LV+L+G +E+ L +V E+M +GSL ++L R L +K +LD + + +L
Sbjct: 67 LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 126
Query: 247 EAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY--GYAAPEY 304
++RD N+L+ + AK+SDFGL K+ ST+ G + APE
Sbjct: 127 ---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS-------STQDTGKLPVKWTAPEA 176
Query: 305 VMTGHLTAKSDVYSFGVVLLEMLTGRR 331
+ + KSDV+SFG++L E+ + R
Sbjct: 177 LREAAFSTKSDVWSFGILLWEIYSFGR 203
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 103/207 (49%), Gaps = 27/207 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
+G+G FG V G G VAVK + +D + +LAE + + L H N
Sbjct: 201 IGKGEFGDVMLG-----------DYRGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSN 247
Query: 189 LVKLIGCCIEDDQRL-LVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALDAAKGLAFLHE 246
LV+L+G +E+ L +V E+M +GSL ++L R L +K +LD + + +L
Sbjct: 248 LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 307
Query: 247 EAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGT--YGYAAPEY 304
++RD N+L+ + AK+SDFGL K+ ST+ G + APE
Sbjct: 308 ---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS-------STQDTGKLPVKWTAPEA 357
Query: 305 VMTGHLTAKSDVYSFGVVLLEMLTGRR 331
+ + KSDV+SFG++L E+ + R
Sbjct: 358 LREKKFSTKSDVWSFGILLWEIYSFGR 384
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 104/208 (50%), Gaps = 12/208 (5%)
Query: 123 FRPECLLGEGGFGCVYKG-WINMNGTATVKPGTGLPVAVKTLNH-DGLQGHKEWLAEVNY 180
F+ +LG G FG VYKG WI + PVA+K L + +KE L E
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEILDEAYV 73
Query: 181 LGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
+ + +P++ +L+G C+ +L+ + MP G L +++ + + + AKG
Sbjct: 74 MASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 132
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
+ +L + + +++RD N+L+ + K++DFGLAK +K + + +
Sbjct: 133 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 301 APEYVMTGHLTAKSDVYSFGVVLLEMLT 328
A E ++ T +SDV+S+GV + E++T
Sbjct: 190 ALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 103/207 (49%), Gaps = 27/207 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
+G+G FG V G G VAVK + +D + +LAE + + L H N
Sbjct: 29 IGKGEFGDVMLG-----------DYRGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSN 75
Query: 189 LVKLIGCCIEDDQRL-LVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALDAAKGLAFLHE 246
LV+L+G +E+ L +V E+M +GSL ++L R L +K +LD + + +L
Sbjct: 76 LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 135
Query: 247 EAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGT--YGYAAPEY 304
++RD N+L+ + AK+SDFGL K+ ST+ G + APE
Sbjct: 136 ---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS-------STQDTGKLPVKWTAPEA 185
Query: 305 VMTGHLTAKSDVYSFGVVLLEMLTGRR 331
+ + KSDV+SFG++L E+ + R
Sbjct: 186 LREKKFSTKSDVWSFGILLWEIYSFGR 212
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 104/208 (50%), Gaps = 12/208 (5%)
Query: 123 FRPECLLGEGGFGCVYKG-WINMNGTATVKPGTGLPVAVKTLNH-DGLQGHKEWLAEVNY 180
F+ +LG G FG VYKG WI + PVA+K L + +KE L E
Sbjct: 42 FKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEILDEAYV 95
Query: 181 LGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
+ + +P++ +L+G C+ +L+ + MP G L +++ + + + AKG
Sbjct: 96 MASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 154
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
+ +L + + +++RD N+L+ + K++DFGLAK +K + + +
Sbjct: 155 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 211
Query: 301 APEYVMTGHLTAKSDVYSFGVVLLEMLT 328
A E ++ T +SDV+S+GV + E++T
Sbjct: 212 ALESILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 104/208 (50%), Gaps = 12/208 (5%)
Query: 123 FRPECLLGEGGFGCVYKG-WINMNGTATVKPGTGLPVAVKTLNH-DGLQGHKEWLAEVNY 180
F+ +LG G FG VYKG WI + PVA+K L + +KE L E
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEILDEAYV 70
Query: 181 LGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
+ + +P++ +L+G C+ +L+ + MP G L +++ + + + AKG
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQLIT-QLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKG 129
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
+ +L + + +++RD N+L+ + K++DFGLAK +K + + +
Sbjct: 130 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 301 APEYVMTGHLTAKSDVYSFGVVLLEMLT 328
A E ++ T +SDV+S+GV + E++T
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 104/208 (50%), Gaps = 12/208 (5%)
Query: 123 FRPECLLGEGGFGCVYKG-WINMNGTATVKPGTGLPVAVKTLNH-DGLQGHKEWLAEVNY 180
F+ +LG G FG VYKG WI + PVA+K L + +KE L E
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEILDEAYV 73
Query: 181 LGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
+ + +P++ +L+G C+ +L+ + MP G L +++ + + + AKG
Sbjct: 74 MASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 132
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
+ +L + + +++RD N+L+ + K++DFGLAK +K + + +
Sbjct: 133 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 301 APEYVMTGHLTAKSDVYSFGVVLLEMLT 328
A E ++ T +SDV+S+GV + E++T
Sbjct: 190 ALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 103/207 (49%), Gaps = 27/207 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
+G+G FG V G G VAVK + +D + +LAE + + L H N
Sbjct: 14 IGKGEFGDVMLG-----------DYRGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSN 60
Query: 189 LVKLIGCCIEDDQRL-LVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALDAAKGLAFLHE 246
LV+L+G +E+ L +V E+M +GSL ++L R L +K +LD + + +L
Sbjct: 61 LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 120
Query: 247 EAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGT--YGYAAPEY 304
++RD N+L+ + AK+SDFGL K+ ST+ G + APE
Sbjct: 121 ---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS-------STQDTGKLPVKWTAPEA 170
Query: 305 VMTGHLTAKSDVYSFGVVLLEMLTGRR 331
+ + KSDV+SFG++L E+ + R
Sbjct: 171 LREKKFSTKSDVWSFGILLWEIYSFGR 197
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 98/211 (46%), Gaps = 19/211 (9%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHD-GLQGHKEWLAEVNYLGGLIHP 187
LG G FG VY+G + + + L VAVKTL Q ++L E + L H
Sbjct: 39 LGHGAFGEVYEGQV----SGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQ 94
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP---LPWSIRM----KIALDAAKG 240
N+V+ IG ++ R ++ E M G L++ L R + P P S+ M +A D A G
Sbjct: 95 NIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACG 153
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGE---YNAKLSDFGLAKDGPEGDKTHVSTRVMGTY 297
+L E I+RD N LL AK+ DFG+A+D M
Sbjct: 154 CQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 210
Query: 298 GYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ PE M G T+K+D +SFGV+L E+ +
Sbjct: 211 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 104/208 (50%), Gaps = 12/208 (5%)
Query: 123 FRPECLLGEGGFGCVYKG-WINMNGTATVKPGTGLPVAVKTLNH-DGLQGHKEWLAEVNY 180
F+ +LG G FG VYKG WI + PVA+K L + +KE L E
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEILDEAYV 70
Query: 181 LGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
+ + +P++ +L+G C+ +L+ + MP G L +++ + + + AKG
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 129
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
+ +L + + +++RD N+L+ + K++DFGLAK +K + + +
Sbjct: 130 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 301 APEYVMTGHLTAKSDVYSFGVVLLEMLT 328
A E ++ T +SDV+S+GV + E++T
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 110/220 (50%), Gaps = 22/220 (10%)
Query: 118 SATKSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGH-KEWLA 176
S++ F+ LG G + VYKG +N T TG+ VA+K + D +G +
Sbjct: 2 SSSSQFKQLEKLGNGTYATVYKG---LNKT------TGVYVALKEVKLDSEEGTPSTAIR 52
Query: 177 EVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP-----LPWSIRM 231
E++ + L H N+V+L +++ LV+EFM L+ ++ R++ L ++
Sbjct: 53 EISLMKELKHENIVRLYDVIHTENKLTLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVK 111
Query: 232 KIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVST 291
+GLAF HE +++RD K N+L++ KL DFGLA+ G + +
Sbjct: 112 YFQWQLLQGLAFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLAR--AFGIPVNTFS 166
Query: 292 RVMGTYGYAAPEYVMTGHLTAKS-DVYSFGVVLLEMLTGR 330
+ T Y AP+ +M + S D++S G +L EM+TG+
Sbjct: 167 SEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 98/211 (46%), Gaps = 19/211 (9%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHD-GLQGHKEWLAEVNYLGGLIHP 187
LG G FG VY+G + + + L VAVKTL Q ++L E + L H
Sbjct: 53 LGHGAFGEVYEGQV----SGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQ 108
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP---LPWSIRM----KIALDAAKG 240
N+V+ IG ++ R ++ E M G L++ L R + P P S+ M +A D A G
Sbjct: 109 NIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACG 167
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGE---YNAKLSDFGLAKDGPEGDKTHVSTRVMGTY 297
+L E I+RD N LL AK+ DFG+A+D M
Sbjct: 168 CQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 224
Query: 298 GYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ PE M G T+K+D +SFGV+L E+ +
Sbjct: 225 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 96/217 (44%), Gaps = 24/217 (11%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWL-AEVNYLGGL-IH 186
LG G FG V + K L VAVK L KE L +E+ + L H
Sbjct: 54 LGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 187 PNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIR--------------M 231
N+V L+G C L++ E+ G L N L R+ P L +S +
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLL 169
Query: 232 KIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVST 291
+ A+G+AFL A K I+RD N+LL + AK+ DFGLA+D V
Sbjct: 170 HFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG 226
Query: 292 RVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ APE + T +SDV+S+G++L E+ +
Sbjct: 227 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 95/203 (46%), Gaps = 19/203 (9%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG+G FG VYK TG A K + + ++++ E+ L HP
Sbjct: 19 LGDGAFGKVYKA---------KNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPY 69
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEEA 248
+VKL+G D + ++ EF P G+++ + L + + L FLH
Sbjct: 70 IVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH--- 126
Query: 249 EKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG 308
K +I+RD K N+L+ E + +L+DFG++ + + S +GT + APE VM
Sbjct: 127 SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS--FIGTPYWMAPEVVMCE 184
Query: 309 HLTA-----KSDVYSFGVVLLEM 326
+ K+D++S G+ L+EM
Sbjct: 185 TMKDTPYDYKADIWSLGITLIEM 207
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 104/208 (50%), Gaps = 12/208 (5%)
Query: 123 FRPECLLGEGGFGCVYKG-WINMNGTATVKPGTGLPVAVKTLNH-DGLQGHKEWLAEVNY 180
F+ +LG G FG VYKG WI + PVA+K L + +KE L E
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEILDEAYV 70
Query: 181 LGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
+ + +P++ +L+G C+ +L+ + MP G L +++ + + + AKG
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 129
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
+ +L + + +++RD N+L+ + K++DFGLAK +K + + +
Sbjct: 130 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 301 APEYVMTGHLTAKSDVYSFGVVLLEMLT 328
A E ++ T +SDV+S+GV + E++T
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 104/208 (50%), Gaps = 12/208 (5%)
Query: 123 FRPECLLGEGGFGCVYKG-WINMNGTATVKPGTGLPVAVKTLNH-DGLQGHKEWLAEVNY 180
F+ +LG G FG VYKG WI + PVA+K L + +KE L E
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEILDEAYV 73
Query: 181 LGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
+ + +P++ +L+G C+ +L+ + MP G L +++ + + + AKG
Sbjct: 74 MASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 132
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
+ +L + + +++RD N+L+ + K++DFGLAK +K + + +
Sbjct: 133 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 301 APEYVMTGHLTAKSDVYSFGVVLLEMLT 328
A E ++ T +SDV+S+GV + E++T
Sbjct: 190 ALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 112/249 (44%), Gaps = 29/249 (11%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEW---LAEVNYLGGLI 185
+G G FG VY N VA+K +++ G Q +++W + EV +L L
Sbjct: 62 IGHGSFGAVYFARDVRNSEV---------VAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR 112
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLH 245
HPN ++ GC + + LV E+ GS + L PL + A +GLA+LH
Sbjct: 113 HPNTIQYRGCYLREHTAWLVMEYC-LGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH 171
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV 305
+I+RD K NILL KL DFG A + +GT + APE +
Sbjct: 172 SHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX------FVGTPYWMAPEVI 222
Query: 306 MT---GHLTAKSDVYSFGVVLLEMLTGRRSM-DKNRPNGEHNLVEWARPQL--GERRRFY 359
+ G K DV+S G+ +E+ + + + N + +++ + P L G ++
Sbjct: 223 LAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYF 282
Query: 360 R-LIDPCLE 367
R +D CL+
Sbjct: 283 RNFVDSCLQ 291
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 104/208 (50%), Gaps = 12/208 (5%)
Query: 123 FRPECLLGEGGFGCVYKG-WINMNGTATVKPGTGLPVAVKTLNH-DGLQGHKEWLAEVNY 180
F+ +LG G FG VYKG WI + PVA+K L + +KE L E
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEILDEAYV 64
Query: 181 LGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
+ + +P++ +L+G C+ +L+ + MP G L +++ + + + AKG
Sbjct: 65 MASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 123
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
+ +L + + +++RD N+L+ + K++DFGLAK +K + + +
Sbjct: 124 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 180
Query: 301 APEYVMTGHLTAKSDVYSFGVVLLEMLT 328
A E ++ T +SDV+S+GV + E++T
Sbjct: 181 ALESILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 102/219 (46%), Gaps = 26/219 (11%)
Query: 119 ATKSFRPEC---LLGE-GGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEW 174
T+ PE ++GE G FG VYK T + A K ++ + +++
Sbjct: 4 VTRDLNPEDFWEIIGELGDFGKVYKA---------QNKETSVLAAAKVIDTKSEEELEDY 54
Query: 175 LAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 234
+ E++ L HPN+VKL+ ++ ++ EF G+++ + PL S +
Sbjct: 55 MVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVC 114
Query: 235 LDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTR-- 292
L +LH + +I+RD K NIL + + KL+DFG++ + +T + R
Sbjct: 115 KQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVS---AKNTRTXIQRRDS 168
Query: 293 VMGTYGYAAPEYVMTGH-----LTAKSDVYSFGVVLLEM 326
+GT + APE VM K+DV+S G+ L+EM
Sbjct: 169 FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 127/296 (42%), Gaps = 47/296 (15%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGL-PVAVKTLNHDGLQG--HKEWLAEVNYLGGLI 185
LGE FG VYKG ++ G A PG VA+KTL D +G +E+ E L
Sbjct: 17 LGEDRFGKVYKG--HLFGPA---PGEQTQAVAIKTLK-DKAEGPLREEFRHEAMLRARLQ 70
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRS-----------------LPLPWS 228
HPN+V L+G +D +++ + G L L RS L P
Sbjct: 71 HPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDF 130
Query: 229 IRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTH 288
+ + + A G+ +L + V+++D T N+L+ + N K+SD GL ++ D
Sbjct: 131 VHLVAQI--AAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYK 185
Query: 289 VSTRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWA 348
+ + + APE +M G + SD++S+GVVL E+ + + ++VE
Sbjct: 186 LLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS--YGLQPYCGYSNQDVVEMI 243
Query: 349 RPQLGERRRFYRLIDPCLEGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALK 404
R R + PC + C + A L C N RPR ++ L+
Sbjct: 244 RN---------RQVLPCPDDCPAWVYA-----LMIECWNEFPSRRPRFKDIHSRLR 285
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 98/202 (48%), Gaps = 13/202 (6%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG G FG V KG+ M + N L+ E LAE N + L +P
Sbjct: 377 LGSGNFGTVKKGYYQMKKVVKTVAVK---ILKNEANDPALK--DELLAEANVMQQLDNPY 431
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEEA 248
+V++IG C E + +LV E G L +L + +I +++ + G+ +L E
Sbjct: 432 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-IELVHQVSMGMKYLEESN 489
Query: 249 EKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY--GYAAPEYVM 306
++RD N+LL ++ AK+SDFGL+K D+ + + G + + APE +
Sbjct: 490 ---FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECIN 545
Query: 307 TGHLTAKSDVYSFGVVLLEMLT 328
++KSDV+SFGV++ E +
Sbjct: 546 YYKFSSKSDVWSFGVLMWEAFS 567
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 98/202 (48%), Gaps = 13/202 (6%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG G FG V KG+ M + N L+ E LAE N + L +P
Sbjct: 378 LGSGNFGTVKKGYYQMKKVVKTVAVK---ILKNEANDPALK--DELLAEANVMQQLDNPY 432
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEEA 248
+V++IG C E + +LV E G L +L + +I +++ + G+ +L E
Sbjct: 433 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-IELVHQVSMGMKYLEESN 490
Query: 249 EKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY--GYAAPEYVM 306
++RD N+LL ++ AK+SDFGL+K D+ + + G + + APE +
Sbjct: 491 ---FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECIN 546
Query: 307 TGHLTAKSDVYSFGVVLLEMLT 328
++KSDV+SFGV++ E +
Sbjct: 547 YYKFSSKSDVWSFGVLMWEAFS 568
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 118/280 (42%), Gaps = 31/280 (11%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHK-EWLAEVNYLGGLIHP 187
+G G FG V+ G + + T VAVK+ K ++L E L HP
Sbjct: 122 IGRGNFGEVFSGRLRADNTL---------VAVKSCRETLPPDLKAKFLQEARILKQYSHP 172
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEE 247
N+V+LIG C + +V E + G L L +++ DAA G+ +L
Sbjct: 173 NIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE-- 230
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
K I+RD N L+ + K+SDFG++++ +G + APE +
Sbjct: 231 -SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNY 289
Query: 308 GHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGE-HNLVEWARPQLGERRRFYRLIDPCL 366
G +++SDV+SFG++L E + S N N + VE + RL PC
Sbjct: 290 GRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVE----------KGGRL--PCP 337
Query: 367 EGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPL 406
E C + +L C + RP S + + L+ +
Sbjct: 338 ELC-----PDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 101/215 (46%), Gaps = 15/215 (6%)
Query: 121 KSFRPEC-----LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWL 175
+ RPEC +LG+GG+G V++ + A + V K + +
Sbjct: 12 EKIRPECFELLRVLGKGGYGKVFQ--VRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTK 69
Query: 176 AEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 235
AE N L + HP +V LI + L+ E++ G L L R + + + +A
Sbjct: 70 AERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLA- 128
Query: 236 DAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDG-PEGDKTHVSTRVM 294
+ + L LH+ K +IYRD K NI+L+ + + KL+DFGL K+ +G TH
Sbjct: 129 EISMALGHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHT---FC 182
Query: 295 GTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
GT Y APE +M D +S G ++ +MLTG
Sbjct: 183 GTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 15/203 (7%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGH-KEWLAEVNYLGGLIHP 187
LG G FG V +G M + VA+K L + +E + E + L +P
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQ-------IDVAIKVLKQGTEKADTEEMMREAQIMHQLDNP 70
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEE 247
+V+LIG C + + +LV E G L L + +P S ++ + G+ +L E
Sbjct: 71 YIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEE- 128
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY--GYAAPEYV 305
K ++RD N+LL + AK+SDFGL+K D ++ + R G + + APE +
Sbjct: 129 --KNFVHRDLAARNVLLVNRHYAKISDFGLSK-ALGADDSYYTARSAGKWPLKWYAPECI 185
Query: 306 MTGHLTAKSDVYSFGVVLLEMLT 328
+++SDV+S+GV + E L+
Sbjct: 186 NFRKFSSRSDVWSYGVTMWEALS 208
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 110/237 (46%), Gaps = 35/237 (14%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGL-----QGHKEWLAEVNYLGG 183
LGEG FG V + TG VA+K +N L QG E E++YL
Sbjct: 21 LGEGSFGKVKLAY---------HTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRL 69
Query: 184 LIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAF 243
L HP+++KL D+ ++V E+ + + R + + R + +A
Sbjct: 70 LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCH 129
Query: 244 LHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 303
H+ +++RD K N+LLD N K++DFGL+ +G+ S G+ YAAPE
Sbjct: 130 RHK-----IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPE 181
Query: 304 YVMTGHLTA--KSDVYSFGVVLLEMLTGRRSMD--------KNRPNGEHNLVEWARP 350
V++G L A + DV+S GV+L ML R D KN NG + L ++ P
Sbjct: 182 -VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSP 237
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 110/237 (46%), Gaps = 35/237 (14%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGL-----QGHKEWLAEVNYLGG 183
LGEG FG V + TG VA+K +N L QG E E++YL
Sbjct: 22 LGEGSFGKVKLAY---------HTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRL 70
Query: 184 LIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAF 243
L HP+++KL D+ ++V E+ + + R + + R + +A
Sbjct: 71 LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCH 130
Query: 244 LHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 303
H+ +++RD K N+LLD N K++DFGL+ +G+ S G+ YAAPE
Sbjct: 131 RHK-----IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPE 182
Query: 304 YVMTGHLTA--KSDVYSFGVVLLEMLTGRRSMD--------KNRPNGEHNLVEWARP 350
V++G L A + DV+S GV+L ML R D KN NG + L ++ P
Sbjct: 183 -VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSP 238
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 110/231 (47%), Gaps = 24/231 (10%)
Query: 111 FSFNELKSATKSFRPE----CL-----LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVK 161
F+F + A + F E C+ +G G FG V G + + G + VA+K
Sbjct: 10 FTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREI------CVAIK 63
Query: 162 TLNHDGL-QGHKEWLAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR 220
TL + +++L+E + +G HPN++ L G + +++ E+M GSL+ L +
Sbjct: 64 TLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRK 123
Query: 221 RSLPLPWSIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAK- 279
+ + G+ +L ++ ++RD NIL++ K+SDFG+++
Sbjct: 124 NDGRFTVIQLVGMLRGIGSGMKYL---SDMSAVHRDLAARNILVNSNLVCKVSDFGMSRV 180
Query: 280 --DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
D PE T ++ + APE + T+ SDV+S+G+V+ E+++
Sbjct: 181 LEDDPEAAYTTRGGKI--PIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMS 229
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 97/211 (45%), Gaps = 19/211 (9%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHD-GLQGHKEWLAEVNYLGGLIHP 187
LG G FG VY+G + + + L VAVKTL Q ++L E + H
Sbjct: 65 LGHGAFGEVYEGQV----SGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQ 120
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP---LPWSIRM----KIALDAAKG 240
N+V+ IG ++ R ++ E M G L++ L R + P P S+ M +A D A G
Sbjct: 121 NIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACG 179
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGE---YNAKLSDFGLAKDGPEGDKTHVSTRVMGTY 297
+L E I+RD N LL AK+ DFG+A+D M
Sbjct: 180 CQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 236
Query: 298 GYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ PE M G T+K+D +SFGV+L E+ +
Sbjct: 237 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 97/211 (45%), Gaps = 19/211 (9%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHD-GLQGHKEWLAEVNYLGGLIHP 187
LG G FG VY+G + + + L VAVKTL Q ++L E + H
Sbjct: 38 LGHGAFGEVYEGQV----SGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQ 93
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP---LPWSIRM----KIALDAAKG 240
N+V+ IG ++ R ++ E M G L++ L R + P P S+ M +A D A G
Sbjct: 94 NIVRCIGVSLQSLPRFILMELMAGGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACG 152
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGE---YNAKLSDFGLAKDGPEGDKTHVSTRVMGTY 297
+L E I+RD N LL AK+ DFG+A+D M
Sbjct: 153 CQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 209
Query: 298 GYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ PE M G T+K+D +SFGV+L E+ +
Sbjct: 210 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 97/211 (45%), Gaps = 19/211 (9%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHD-GLQGHKEWLAEVNYLGGLIHP 187
LG G FG VY+G + + + L VAVKTL Q ++L E + H
Sbjct: 55 LGHGAFGEVYEGQV----SGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQ 110
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP---LPWSIRM----KIALDAAKG 240
N+V+ IG ++ R ++ E M G L++ L R + P P S+ M +A D A G
Sbjct: 111 NIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACG 169
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGE---YNAKLSDFGLAKDGPEGDKTHVSTRVMGTY 297
+L E I+RD N LL AK+ DFG+A+D M
Sbjct: 170 CQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 226
Query: 298 GYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ PE M G T+K+D +SFGV+L E+ +
Sbjct: 227 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 97/211 (45%), Gaps = 19/211 (9%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHD-GLQGHKEWLAEVNYLGGLIHP 187
LG G FG VY+G + + + L VAVKTL Q ++L E + H
Sbjct: 38 LGHGAFGEVYEGQV----SGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQ 93
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP---LPWSIRM----KIALDAAKG 240
N+V+ IG ++ R ++ E M G L++ L R + P P S+ M +A D A G
Sbjct: 94 NIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACG 152
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGE---YNAKLSDFGLAKDGPEGDKTHVSTRVMGTY 297
+L E I+RD N LL AK+ DFG+A+D M
Sbjct: 153 CQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 209
Query: 298 GYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ PE M G T+K+D +SFGV+L E+ +
Sbjct: 210 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 95/217 (43%), Gaps = 22/217 (10%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLI--H 186
LGEG FG V G KP + VAVK L D + L + +I H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 187 PNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP---------------LPWSIRM 231
N++ L+G C +D ++ + +G+L +L R P + + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 232 KIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVST 291
A+G+ +L A + I+RD N+L+ K++DFGLA+D D +T
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 292 RVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ APE + T +SDV+SFGV++ E+ T
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 97/211 (45%), Gaps = 19/211 (9%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHD-GLQGHKEWLAEVNYLGGLIHP 187
LG G FG VY+G + + + L VAVKTL Q ++L E + H
Sbjct: 39 LGHGAFGEVYEGQV----SGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQ 94
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP---LPWSIRM----KIALDAAKG 240
N+V+ IG ++ R ++ E M G L++ L R + P P S+ M +A D A G
Sbjct: 95 NIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACG 153
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGE---YNAKLSDFGLAKDGPEGDKTHVSTRVMGTY 297
+L E I+RD N LL AK+ DFG+A+D M
Sbjct: 154 CQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 210
Query: 298 GYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ PE M G T+K+D +SFGV+L E+ +
Sbjct: 211 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 97/211 (45%), Gaps = 19/211 (9%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHD-GLQGHKEWLAEVNYLGGLIHP 187
LG G FG VY+G + + + L VAVKTL Q ++L E + H
Sbjct: 45 LGHGAFGEVYEGQV----SGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQ 100
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP---LPWSIRM----KIALDAAKG 240
N+V+ IG ++ R ++ E M G L++ L R + P P S+ M +A D A G
Sbjct: 101 NIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACG 159
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGE---YNAKLSDFGLAKDGPEGDKTHVSTRVMGTY 297
+L E I+RD N LL AK+ DFG+A+D M
Sbjct: 160 CQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 216
Query: 298 GYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ PE M G T+K+D +SFGV+L E+ +
Sbjct: 217 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 110/237 (46%), Gaps = 35/237 (14%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGL-----QGHKEWLAEVNYLGG 183
LGEG FG V + TG VA+K +N L QG E E++YL
Sbjct: 12 LGEGSFGKVKLAY---------HTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRL 60
Query: 184 LIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAF 243
L HP+++KL D+ ++V E+ + + R + + R + +A
Sbjct: 61 LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCH 120
Query: 244 LHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 303
H+ +++RD K N+LLD N K++DFGL+ +G+ S G+ YAAPE
Sbjct: 121 RHK-----IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPE 172
Query: 304 YVMTGHLTA--KSDVYSFGVVLLEMLTGRRSMD--------KNRPNGEHNLVEWARP 350
V++G L A + DV+S GV+L ML R D KN NG + L ++ P
Sbjct: 173 -VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSP 228
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 101/215 (46%), Gaps = 15/215 (6%)
Query: 121 KSFRPEC-----LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWL 175
+ RPEC +LG+GG+G V++ + A + V K + +
Sbjct: 12 EKIRPECFELLRVLGKGGYGKVFQ--VRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTK 69
Query: 176 AEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL 235
AE N L + HP +V LI + L+ E++ G L L R + + + +A
Sbjct: 70 AERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLA- 128
Query: 236 DAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDG-PEGDKTHVSTRVM 294
+ + L LH+ K +IYRD K NI+L+ + + KL+DFGL K+ +G TH
Sbjct: 129 EISMALGHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHX---FC 182
Query: 295 GTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
GT Y APE +M D +S G ++ +MLTG
Sbjct: 183 GTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 117/279 (41%), Gaps = 29/279 (10%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHK-EWLAEVNYLGGLIHP 187
+G G FG V+ G + + T VAVK+ K ++L E L HP
Sbjct: 122 IGRGNFGEVFSGRLRADNTL---------VAVKSCRETLPPDLKAKFLQEARILKQYSHP 172
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEE 247
N+V+LIG C + +V E + G L L +++ DAA G+ +L
Sbjct: 173 NIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE-- 230
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
K I+RD N L+ + K+SDFG++++ +G + APE +
Sbjct: 231 -SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNY 289
Query: 308 GHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPQLGERRRFYRLIDPCLE 367
G +++SDV+SFG++L E + S N N + R + + R PC E
Sbjct: 290 GRYSSESDVWSFGILLWETFSLGASPYPNLSNQQ------TREFVEKGGRL-----PCPE 338
Query: 368 GCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPL 406
C + +L C + RP S + + L+ +
Sbjct: 339 LC-----PDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 112/249 (44%), Gaps = 29/249 (11%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEW---LAEVNYLGGLI 185
+G G FG VY N VA+K +++ G Q +++W + EV +L L
Sbjct: 23 IGHGSFGAVYFARDVRNSEV---------VAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR 73
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLH 245
HPN ++ GC + + LV E+ GS + L PL + A +GLA+LH
Sbjct: 74 HPNTIQYRGCYLREHTAWLVMEYC-LGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH 132
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV 305
+I+RD K NILL KL DFG A + +GT + APE +
Sbjct: 133 SHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANX------FVGTPYWMAPEVI 183
Query: 306 MT---GHLTAKSDVYSFGVVLLEMLTGRRSM-DKNRPNGEHNLVEWARPQL--GERRRFY 359
+ G K DV+S G+ +E+ + + + N + +++ + P L G ++
Sbjct: 184 LAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYF 243
Query: 360 R-LIDPCLE 367
R +D CL+
Sbjct: 244 RNFVDSCLQ 252
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 97/211 (45%), Gaps = 19/211 (9%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHD-GLQGHKEWLAEVNYLGGLIHP 187
LG G FG VY+G + + + L VAVKTL Q ++L E + H
Sbjct: 53 LGHGAFGEVYEGQV----SGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQ 108
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP---LPWSIRM----KIALDAAKG 240
N+V+ IG ++ R ++ E M G L++ L R + P P S+ M +A D A G
Sbjct: 109 NIVRCIGVSLQSLPRFILMELMAGGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACG 167
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGE---YNAKLSDFGLAKDGPEGDKTHVSTRVMGTY 297
+L E I+RD N LL AK+ DFG+A+D M
Sbjct: 168 CQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 224
Query: 298 GYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ PE M G T+K+D +SFGV+L E+ +
Sbjct: 225 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 110/237 (46%), Gaps = 35/237 (14%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGL-----QGHKEWLAEVNYLGG 183
LGEG FG V + TG VA+K +N L QG E E++YL
Sbjct: 16 LGEGSFGKVKLAY---------HTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRL 64
Query: 184 LIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAF 243
L HP+++KL D+ ++V E+ + + R + + R + +A
Sbjct: 65 LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCH 124
Query: 244 LHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 303
H+ +++RD K N+LLD N K++DFGL+ +G+ S G+ YAAPE
Sbjct: 125 RHK-----IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPE 176
Query: 304 YVMTGHLTA--KSDVYSFGVVLLEMLTGRRSMD--------KNRPNGEHNLVEWARP 350
V++G L A + DV+S GV+L ML R D KN NG + L ++ P
Sbjct: 177 -VISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSP 232
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 97/211 (45%), Gaps = 19/211 (9%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHD-GLQGHKEWLAEVNYLGGLIHP 187
LG G FG VY+G + + + L VAVKTL Q ++L E + H
Sbjct: 30 LGHGAFGEVYEGQV----SGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQ 85
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP---LPWSIRM----KIALDAAKG 240
N+V+ IG ++ R ++ E M G L++ L R + P P S+ M +A D A G
Sbjct: 86 NIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACG 144
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGE---YNAKLSDFGLAKDGPEGDKTHVSTRVMGTY 297
+L E I+RD N LL AK+ DFG+A+D M
Sbjct: 145 CQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 201
Query: 298 GYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ PE M G T+K+D +SFGV+L E+ +
Sbjct: 202 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 97/211 (45%), Gaps = 19/211 (9%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHD-GLQGHKEWLAEVNYLGGLIHP 187
LG G FG VY+G + + + L VAVKTL Q ++L E + H
Sbjct: 39 LGHGAFGEVYEGQV----SGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQ 94
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP---LPWSIRM----KIALDAAKG 240
N+V+ IG ++ R ++ E M G L++ L R + P P S+ M +A D A G
Sbjct: 95 NIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACG 153
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGE---YNAKLSDFGLAKDGPEGDKTHVSTRVMGTY 297
+L E I+RD N LL AK+ DFG+A+D M
Sbjct: 154 CQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPV 210
Query: 298 GYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ PE M G T+K+D +SFGV+L E+ +
Sbjct: 211 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 97/211 (45%), Gaps = 19/211 (9%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHD-GLQGHKEWLAEVNYLGGLIHP 187
LG G FG VY+G + + + L VAVKTL Q ++L E + H
Sbjct: 53 LGHGAFGEVYEGQV----SGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQ 108
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP---LPWSIRM----KIALDAAKG 240
N+V+ IG ++ R ++ E M G L++ L R + P P S+ M +A D A G
Sbjct: 109 NIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACG 167
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGE---YNAKLSDFGLAKDGPEGDKTHVSTRVMGTY 297
+L E I+RD N LL AK+ DFG+A+D M
Sbjct: 168 CQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPV 224
Query: 298 GYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ PE M G T+K+D +SFGV+L E+ +
Sbjct: 225 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 96/204 (47%), Gaps = 15/204 (7%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
+GEG +G VYK + G L + + ++ E++ L L HPN
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-------EISLLKELNHPN 67
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALDAAKGLAFLHEE 247
+VKL+ +++ LV+EF+ L+ + +L +P + +GLAF H
Sbjct: 68 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 126
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM- 306
V++RD K N+L++ E KL+DFGLA+ G T + T Y APE ++
Sbjct: 127 R---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLG 181
Query: 307 TGHLTAKSDVYSFGVVLLEMLTGR 330
+ + D++S G + EM+T R
Sbjct: 182 CKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 98/202 (48%), Gaps = 13/202 (6%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG G FG V KG+ M L N L+ E LAE N + L +P
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILK---NEANDPALKD--ELLAEANVMQQLDNPY 89
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEEA 248
+V++IG C E + +LV E G L +L + +I +++ + G+ +L E
Sbjct: 90 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-IELVHQVSMGMKYLEESN 147
Query: 249 EKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY--GYAAPEYVM 306
++RD N+LL ++ AK+SDFGL+K D+ + + G + + APE +
Sbjct: 148 ---FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECIN 203
Query: 307 TGHLTAKSDVYSFGVVLLEMLT 328
++KSDV+SFGV++ E +
Sbjct: 204 YYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 98/202 (48%), Gaps = 13/202 (6%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG G FG V KG+ M L N L+ E LAE N + L +P
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILK---NEANDPALKD--ELLAEANVMQQLDNPY 89
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEEA 248
+V++IG C E + +LV E G L +L + +I +++ + G+ +L E
Sbjct: 90 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-IELVHQVSMGMKYLEESN 147
Query: 249 EKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY--GYAAPEYVM 306
++RD N+LL ++ AK+SDFGL+K D+ + + G + + APE +
Sbjct: 148 ---FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECIN 203
Query: 307 TGHLTAKSDVYSFGVVLLEMLT 328
++KSDV+SFGV++ E +
Sbjct: 204 YYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 104/208 (50%), Gaps = 12/208 (5%)
Query: 123 FRPECLLGEGGFGCVYKG-WINMNGTATVKPGTGLPVAVKTLNH-DGLQGHKEWLAEVNY 180
F+ +L G FG VYKG WI + PVA+K L + +KE L E
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEILDEAYV 77
Query: 181 LGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
+ + +P++ +L+G C+ +L++ + MP G L +++ + + + AKG
Sbjct: 78 MASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 136
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
+ +L + + +++RD N+L+ + K++DFGLAK +K + + +
Sbjct: 137 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 193
Query: 301 APEYVMTGHLTAKSDVYSFGVVLLEMLT 328
A E ++ T +SDV+S+GV + E++T
Sbjct: 194 ALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 104/208 (50%), Gaps = 12/208 (5%)
Query: 123 FRPECLLGEGGFGCVYKG-WINMNGTATVKPGTGLPVAVKTLNH-DGLQGHKEWLAEVNY 180
F+ +LG G FG VYKG WI + PVA+K L + +KE L E
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEILDEAYV 72
Query: 181 LGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
+ + +P++ +L+G C+ +L++ + MP G L +++ + + + AKG
Sbjct: 73 MASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 131
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
+ +L + + +++RD N+L+ + K++DFG AK +K + + +
Sbjct: 132 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 301 APEYVMTGHLTAKSDVYSFGVVLLEMLT 328
A E ++ T +SDV+S+GV + E++T
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 97/211 (45%), Gaps = 19/211 (9%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHD-GLQGHKEWLAEVNYLGGLIHP 187
LG G FG VY+G + + + L VAVKTL Q ++L E + H
Sbjct: 79 LGHGAFGEVYEGQV----SGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQ 134
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP---LPWSIRM----KIALDAAKG 240
N+V+ IG ++ R ++ E M G L++ L R + P P S+ M +A D A G
Sbjct: 135 NIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACG 193
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGE---YNAKLSDFGLAKDGPEGDKTHVSTRVMGTY 297
+L E I+RD N LL AK+ DFG+A+D M
Sbjct: 194 CQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPV 250
Query: 298 GYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ PE M G T+K+D +SFGV+L E+ +
Sbjct: 251 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 98/202 (48%), Gaps = 13/202 (6%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG G FG V KG+ M L N L+ E LAE N + L +P
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILK---NEANDPALKD--ELLAEANVMQQLDNPY 87
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEEA 248
+V++IG C E + +LV E G L +L + +I +++ + G+ +L E
Sbjct: 88 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-IELVHQVSMGMKYLEESN 145
Query: 249 EKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY--GYAAPEYVM 306
++RD N+LL ++ AK+SDFGL+K D+ + + G + + APE +
Sbjct: 146 ---FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECIN 201
Query: 307 TGHLTAKSDVYSFGVVLLEMLT 328
++KSDV+SFGV++ E +
Sbjct: 202 YYKFSSKSDVWSFGVLMWEAFS 223
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 97/211 (45%), Gaps = 19/211 (9%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHD-GLQGHKEWLAEVNYLGGLIHP 187
LG G FG VY+G + + + L VAVKTL Q ++L E + H
Sbjct: 56 LGHGAFGEVYEGQV----SGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQ 111
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP---LPWSIRM----KIALDAAKG 240
N+V+ IG ++ R ++ E M G L++ L R + P P S+ M +A D A G
Sbjct: 112 NIVRCIGVSLQSLPRFILLELMAGGDLKSFL-RETRPRPSQPSSLAMLDLLHVARDIACG 170
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGE---YNAKLSDFGLAKDGPEGDKTHVSTRVMGTY 297
+L E I+RD N LL AK+ DFG+A+D M
Sbjct: 171 CQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPV 227
Query: 298 GYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ PE M G T+K+D +SFGV+L E+ +
Sbjct: 228 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 104/208 (50%), Gaps = 12/208 (5%)
Query: 123 FRPECLLGEGGFGCVYKG-WINMNGTATVKPGTGLPVAVKTLNH-DGLQGHKEWLAEVNY 180
F+ +LG G FG VYKG WI + PVA+K L + +KE L E
Sbjct: 14 FKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEILDEAYV 67
Query: 181 LGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
+ + +P++ +L+G C+ +L+ + MP G L +++ + + + A+G
Sbjct: 68 MASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEG 126
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
+ +L + + +++RD N+L+ + K++DFGLAK +K + + +
Sbjct: 127 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 183
Query: 301 APEYVMTGHLTAKSDVYSFGVVLLEMLT 328
A E ++ T +SDV+S+GV + E++T
Sbjct: 184 ALESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 104/227 (45%), Gaps = 37/227 (16%)
Query: 129 LGEGGFGCVYKGW-INMNGTATVKPGTGLPVAVKTLNHDGLQGH-KEWLAEVNYLGGLIH 186
LGEG FG V K ++ G A VAVK L + ++ L+E N L + H
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTT-----VAVKMLKENASPSELRDLLSEFNVLKQVNH 85
Query: 187 PNLVKLIGCCIEDDQRLLVYEFMPRGSLE-------------------------NHLFRR 221
P+++KL G C +D LL+ E+ GSL +H R
Sbjct: 86 PHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDER 145
Query: 222 SLPLPWSIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDG 281
+L + + A ++G+ +L AE +++RD NIL+ K+SDFGL++D
Sbjct: 146 ALTM--GDLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKMKISDFGLSRDV 200
Query: 282 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
E D ++ + A E + T +SDV+SFGV+L E++T
Sbjct: 201 YEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 103/208 (49%), Gaps = 12/208 (5%)
Query: 123 FRPECLLGEGGFGCVYKG-WINMNGTATVKPGTGLPVAVKTLNH-DGLQGHKEWLAEVNY 180
F+ +L G FG VYKG WI + PVA+K L + +KE L E
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEILDEAYV 77
Query: 181 LGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
+ + +P++ +L+G C+ +L+ + MP G L +++ + + + AKG
Sbjct: 78 MASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 136
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
+ +L + + +++RD N+L+ + K++DFGLAK +K + + +
Sbjct: 137 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 193
Query: 301 APEYVMTGHLTAKSDVYSFGVVLLEMLT 328
A E ++ T +SDV+S+GV + E++T
Sbjct: 194 ALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 96/204 (47%), Gaps = 15/204 (7%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
+GEG +G VYK + G L + + ++ E++ L L HPN
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-------EISLLKELNHPN 62
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALDAAKGLAFLHEE 247
+VKL+ +++ LV+EF+ L+ + +L +P + +GLAF H
Sbjct: 63 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM- 306
V++RD K N+L++ E KL+DFGLA+ G T + T Y APE ++
Sbjct: 122 R---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLG 176
Query: 307 TGHLTAKSDVYSFGVVLLEMLTGR 330
+ + D++S G + EM+T R
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 96/204 (47%), Gaps = 15/204 (7%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
+GEG +G VYK + G L + + ++ E++ L L HPN
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-------EISLLKELNHPN 63
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALDAAKGLAFLHEE 247
+VKL+ +++ LV+EF+ L+ + +L +P + +GLAF H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM- 306
V++RD K N+L++ E KL+DFGLA+ G T + T Y APE ++
Sbjct: 123 R---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLG 177
Query: 307 TGHLTAKSDVYSFGVVLLEMLTGR 330
+ + D++S G + EM+T R
Sbjct: 178 XKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 96/204 (47%), Gaps = 15/204 (7%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
+GEG +G VYK + G L + + ++ E++ L L HPN
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-------EISLLKELNHPN 70
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALDAAKGLAFLHEE 247
+VKL+ +++ LV+EF+ L+ + +L +P + +GLAF H
Sbjct: 71 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 129
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM- 306
V++RD K N+L++ E KL+DFGLA+ G T + T Y APE ++
Sbjct: 130 R---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLG 184
Query: 307 TGHLTAKSDVYSFGVVLLEMLTGR 330
+ + D++S G + EM+T R
Sbjct: 185 XKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 96/204 (47%), Gaps = 15/204 (7%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
+GEG +G VYK + G L + + ++ E++ L L HPN
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-------EISLLKELNHPN 70
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALDAAKGLAFLHEE 247
+VKL+ +++ LV+EF+ L+ + +L +P + +GLAF H
Sbjct: 71 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 129
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM- 306
V++RD K N+L++ E KL+DFGLA+ G T + T Y APE ++
Sbjct: 130 R---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLG 184
Query: 307 TGHLTAKSDVYSFGVVLLEMLTGR 330
+ + D++S G + EM+T R
Sbjct: 185 CKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 121/312 (38%), Gaps = 50/312 (16%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAE----VNYLGGL 184
LG G FG V + +K + VAVK L +E L ++YLG
Sbjct: 54 LGAGAFGKV----VEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN- 108
Query: 185 IHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWS---------------- 228
H N+V L+G C L++ E+ G L N L R+ S
Sbjct: 109 -HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 167
Query: 229 -IRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKT 287
+ + AKG+AFL A K I+RD NILL K+ DFGLA+
Sbjct: 168 EDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNY 224
Query: 288 HVSTRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEW 347
V + APE + T +SDV+S+G+ L E+ + S
Sbjct: 225 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSS--------------- 269
Query: 348 ARPQLGERRRFYRLIDPCLEGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPLP 407
P + +FY++I + + +C + D RP ++V+ ++
Sbjct: 270 PYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIE--- 326
Query: 408 YLKDMASSSSYV 419
K ++ S++++
Sbjct: 327 --KQISESTNHI 336
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 104/227 (45%), Gaps = 37/227 (16%)
Query: 129 LGEGGFGCVYKGW-INMNGTATVKPGTGLPVAVKTLNHDGLQGH-KEWLAEVNYLGGLIH 186
LGEG FG V K ++ G A VAVK L + ++ L+E N L + H
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTT-----VAVKMLKENASPSELRDLLSEFNVLKQVNH 85
Query: 187 PNLVKLIGCCIEDDQRLLVYEFMPRGSLE-------------------------NHLFRR 221
P+++KL G C +D LL+ E+ GSL +H R
Sbjct: 86 PHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDER 145
Query: 222 SLPLPWSIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDG 281
+L + + A ++G+ +L AE +++RD NIL+ K+SDFGL++D
Sbjct: 146 ALTM--GDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDV 200
Query: 282 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
E D ++ + A E + T +SDV+SFGV+L E++T
Sbjct: 201 YEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 96/204 (47%), Gaps = 15/204 (7%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
+GEG +G VYK + G L + + ++ E++ L L HPN
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-------EISLLKELNHPN 63
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALDAAKGLAFLHEE 247
+VKL+ +++ LV+EF+ L+ + +L +P + +GLAF H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM- 306
V++RD K N+L++ E KL+DFGLA+ G T + T Y APE ++
Sbjct: 123 R---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLG 177
Query: 307 TGHLTAKSDVYSFGVVLLEMLTGR 330
+ + D++S G + EM+T R
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 96/204 (47%), Gaps = 15/204 (7%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
+GEG +G VYK + G L + + ++ E++ L L HPN
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-------EISLLKELNHPN 62
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALDAAKGLAFLHEE 247
+VKL+ +++ LV+EF+ L+ + +L +P + +GLAF H
Sbjct: 63 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM- 306
V++RD K N+L++ E KL+DFGLA+ G T + T Y APE ++
Sbjct: 122 R---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLG 176
Query: 307 TGHLTAKSDVYSFGVVLLEMLTGR 330
+ + D++S G + EM+T R
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 104/208 (50%), Gaps = 12/208 (5%)
Query: 123 FRPECLLGEGGFGCVYKG-WINMNGTATVKPGTGLPVAVKTLNH-DGLQGHKEWLAEVNY 180
F+ +LG G FG VYKG WI + PVA+K L + +KE L E
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEILDEAYV 72
Query: 181 LGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
+ + +P++ +L+G C+ +L++ + MP G L +++ + + + AKG
Sbjct: 73 MASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 131
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
+ +L + + +++RD N+L+ + K++DFG AK +K + + +
Sbjct: 132 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 301 APEYVMTGHLTAKSDVYSFGVVLLEMLT 328
A E ++ T +SDV+S+GV + E++T
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 103/208 (49%), Gaps = 12/208 (5%)
Query: 123 FRPECLLGEGGFGCVYKG-WINMNGTATVKPGTGLPVAVKTLNH-DGLQGHKEWLAEVNY 180
F+ +LG G FG VYKG WI + PVA+ L + +KE L E
Sbjct: 51 FKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIMELREATSPKANKEILDEAYV 104
Query: 181 LGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
+ + +P++ +L+G C+ +L+ + MP G L +++ + + + AKG
Sbjct: 105 MASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 163
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
+ +L + + +++RD N+L+ + K++DFGLAK +K + + +
Sbjct: 164 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 220
Query: 301 APEYVMTGHLTAKSDVYSFGVVLLEMLT 328
A E ++ T +SDV+S+GV + E++T
Sbjct: 221 ALESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 96/204 (47%), Gaps = 15/204 (7%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
+GEG +G VYK + G L + + ++ E++ L L HPN
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-------EISLLKELNHPN 64
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALDAAKGLAFLHEE 247
+VKL+ +++ LV+EF+ L+ + +L +P + +GLAF H
Sbjct: 65 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM- 306
V++RD K N+L++ E KL+DFGLA+ G T + T Y APE ++
Sbjct: 124 R---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLG 178
Query: 307 TGHLTAKSDVYSFGVVLLEMLTGR 330
+ + D++S G + EM+T R
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 103/208 (49%), Gaps = 12/208 (5%)
Query: 123 FRPECLLGEGGFGCVYKG-WINMNGTATVKPGTGLPVAVKTLNH-DGLQGHKEWLAEVNY 180
F+ +LG G FG VYKG WI + PVA+K L + +KE L E
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEILDEAYV 72
Query: 181 LGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
+ + +P++ +L+G C+ +L+ + MP G L +++ + + + AKG
Sbjct: 73 MASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 131
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
+ +L + + +++RD N+L+ + K++DFG AK +K + + +
Sbjct: 132 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 301 APEYVMTGHLTAKSDVYSFGVVLLEMLT 328
A E ++ T +SDV+S+GV + E++T
Sbjct: 189 ALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 96/204 (47%), Gaps = 15/204 (7%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
+GEG +G VYK + G L + + ++ E++ L L HPN
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIR-------EISLLKELNHPN 63
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALDAAKGLAFLHEE 247
+VKL+ +++ LV+EF+ L+ + +L +P + +GLAF H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM- 306
V++RD K N+L++ E KL+DFGLA+ G T + T Y APE ++
Sbjct: 123 R---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLG 177
Query: 307 TGHLTAKSDVYSFGVVLLEMLTGR 330
+ + D++S G + EM+T R
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 98/202 (48%), Gaps = 13/202 (6%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG G FG V KG+ M L N L+ E LAE N + L +P
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILK---NEANDPALKD--ELLAEANVMQQLDNPY 79
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEEA 248
+V++IG C E + +LV E G L +L + +I +++ + G+ +L E
Sbjct: 80 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-IELVHQVSMGMKYLEE-- 135
Query: 249 EKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY--GYAAPEYVM 306
++RD N+LL ++ AK+SDFGL+K D+ + + G + + APE +
Sbjct: 136 -SNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECIN 193
Query: 307 TGHLTAKSDVYSFGVVLLEMLT 328
++KSDV+SFGV++ E +
Sbjct: 194 YYKFSSKSDVWSFGVLMWEAFS 215
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 96/204 (47%), Gaps = 15/204 (7%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
+GEG +G VYK + G L + + ++ E++ L L HPN
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIR-------EISLLKELNHPN 62
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALDAAKGLAFLHEE 247
+VKL+ +++ LV+EF+ L+ + +L +P + +GLAF H
Sbjct: 63 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM- 306
V++RD K N+L++ E KL+DFGLA+ G T + T Y APE ++
Sbjct: 122 R---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLG 176
Query: 307 TGHLTAKSDVYSFGVVLLEMLTGR 330
+ + D++S G + EM+T R
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 104/208 (50%), Gaps = 12/208 (5%)
Query: 123 FRPECLLGEGGFGCVYKG-WINMNGTATVKPGTGLPVAVKTLNH-DGLQGHKEWLAEVNY 180
F+ +LG G FG VYKG WI + PVA+K L + +KE L E
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEILDEAYV 74
Query: 181 LGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
+ + +P++ +L+G C+ +L++ + MP G L +++ + + + AKG
Sbjct: 75 MASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 133
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
+ +L + + +++RD N+L+ + K++DFG AK +K + + +
Sbjct: 134 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 190
Query: 301 APEYVMTGHLTAKSDVYSFGVVLLEMLT 328
A E ++ T +SDV+S+GV + E++T
Sbjct: 191 ALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 96/204 (47%), Gaps = 15/204 (7%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
+GEG +G VYK + G L + + ++ E++ L L HPN
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-------EISLLKELNHPN 63
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALDAAKGLAFLHEE 247
+VKL+ +++ LV+EF+ L+ + +L +P + +GLAF H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM- 306
V++RD K N+L++ E KL+DFGLA+ G T + T Y APE ++
Sbjct: 123 R---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLG 177
Query: 307 TGHLTAKSDVYSFGVVLLEMLTGR 330
+ + D++S G + EM+T R
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 95/217 (43%), Gaps = 22/217 (10%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLI--H 186
LGEG FG V G KP + VAVK L D + L + +I H
Sbjct: 43 LGEGAFGQVVMA--EAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 187 PNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP---------------LPWSIRM 231
N++ L+G C +D ++ + +G+L +L R P + + +
Sbjct: 101 KNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 232 KIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVST 291
A+G+ +L A + I+RD N+L+ K++DFGLA+D D +T
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 292 RVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ APE + T +SDV+SFGV++ E+ T
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 103/208 (49%), Gaps = 12/208 (5%)
Query: 123 FRPECLLGEGGFGCVYKG-WINMNGTATVKPGTGLPVAVKTLNH-DGLQGHKEWLAEVNY 180
F+ +L G FG VYKG WI + PVA+K L + +KE L E
Sbjct: 17 FKKIKVLSSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEILDEAYV 70
Query: 181 LGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
+ + +P++ +L+G C+ +L+ + MP G L +++ + + + AKG
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 129
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
+ +L + + +++RD N+L+ + K++DFGLAK +K + + +
Sbjct: 130 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 301 APEYVMTGHLTAKSDVYSFGVVLLEMLT 328
A E ++ T +SDV+S+GV + E++T
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 98/202 (48%), Gaps = 13/202 (6%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG G FG V KG+ M L N L+ E LAE N + L +P
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILK---NEANDPALK--DELLAEANVMQQLDNPY 67
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEEA 248
+V++IG C E + +LV E G L +L + +I +++ + G+ +L E
Sbjct: 68 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-IELVHQVSMGMKYLEE-- 123
Query: 249 EKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY--GYAAPEYVM 306
++RD N+LL ++ AK+SDFGL+K D+ + + G + + APE +
Sbjct: 124 -SNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECIN 181
Query: 307 TGHLTAKSDVYSFGVVLLEMLT 328
++KSDV+SFGV++ E +
Sbjct: 182 YYKFSSKSDVWSFGVLMWEAFS 203
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 99/203 (48%), Gaps = 15/203 (7%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGH-KEWLAEVNYLGGLIHP 187
LG G FG V +G M + VA+K L + +E + E + L +P
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQ-------IDVAIKVLKQGTEKADTEEMMREAQIMHQLDNP 396
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEE 247
+V+LIG C + + +LV E G L L + +P S ++ + G+ +L E
Sbjct: 397 YIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEE- 454
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY--GYAAPEYV 305
K ++R+ N+LL + AK+SDFGL+K D ++ + R G + + APE +
Sbjct: 455 --KNFVHRNLAARNVLLVNRHYAKISDFGLSK-ALGADDSYYTARSAGKWPLKWYAPECI 511
Query: 306 MTGHLTAKSDVYSFGVVLLEMLT 328
+++SDV+S+GV + E L+
Sbjct: 512 NFRKFSSRSDVWSYGVTMWEALS 534
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 103/208 (49%), Gaps = 12/208 (5%)
Query: 123 FRPECLLGEGGFGCVYKG-WINMNGTATVKPGTGLPVAVKTLNH-DGLQGHKEWLAEVNY 180
F+ +LG G FG VYKG WI + PVA+K L + +KE L E
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEILDEAYV 77
Query: 181 LGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
+ + +P++ +L+G C+ +L+ + MP G L +++ + + + AKG
Sbjct: 78 MASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 136
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
+ +L + + +++RD N+L+ + K++DFG AK +K + + +
Sbjct: 137 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 193
Query: 301 APEYVMTGHLTAKSDVYSFGVVLLEMLT 328
A E ++ T +SDV+S+GV + E++T
Sbjct: 194 ALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 98/202 (48%), Gaps = 13/202 (6%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG G FG V KG+ M L N L+ E LAE N + L +P
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILK---NEANDPALKD--ELLAEANVMQQLDNPY 69
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEEA 248
+V++IG C E + +LV E G L +L + +I +++ + G+ +L E
Sbjct: 70 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-IELVHQVSMGMKYLEE-- 125
Query: 249 EKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY--GYAAPEYVM 306
++RD N+LL ++ AK+SDFGL+K D+ + + G + + APE +
Sbjct: 126 -SNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECIN 183
Query: 307 TGHLTAKSDVYSFGVVLLEMLT 328
++KSDV+SFGV++ E +
Sbjct: 184 YYKFSSKSDVWSFGVLMWEAFS 205
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 98/202 (48%), Gaps = 13/202 (6%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG G FG V KG+ M L N L+ E LAE N + L +P
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILK---NEANDPALKD--ELLAEANVMQQLDNPY 73
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEEA 248
+V++IG C E + +LV E G L +L + +I +++ + G+ +L E
Sbjct: 74 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-IELVHQVSMGMKYLEE-- 129
Query: 249 EKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY--GYAAPEYVM 306
++RD N+LL ++ AK+SDFGL+K D+ + + G + + APE +
Sbjct: 130 -SNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECIN 187
Query: 307 TGHLTAKSDVYSFGVVLLEMLT 328
++KSDV+SFGV++ E +
Sbjct: 188 YYKFSSKSDVWSFGVLMWEAFS 209
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 103/208 (49%), Gaps = 12/208 (5%)
Query: 123 FRPECLLGEGGFGCVYKG-WINMNGTATVKPGTGLPVAVKTLNH-DGLQGHKEWLAEVNY 180
F+ +LG G FG VYKG WI + PVA+K L + +KE L E
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKI------PVAIKELREATSPKANKEILDEAYV 70
Query: 181 LGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
+ + +P++ +L+G C+ +L+ + MP G L +++ + + + AKG
Sbjct: 71 MASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 129
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
+ +L + + +++RD N+L+ + K++DFG AK +K + + +
Sbjct: 130 MNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 301 APEYVMTGHLTAKSDVYSFGVVLLEMLT 328
A E ++ T +SDV+S+GV + E++T
Sbjct: 187 ALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 104/227 (45%), Gaps = 37/227 (16%)
Query: 129 LGEGGFGCVYKGW-INMNGTATVKPGTGLPVAVKTLNHDGLQGH-KEWLAEVNYLGGLIH 186
LGEG FG V K ++ G A VAVK L + ++ L+E N L + H
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTT-----VAVKMLKENASPSELRDLLSEFNVLKQVNH 85
Query: 187 PNLVKLIGCCIEDDQRLLVYEFMPRGSLE-------------------------NHLFRR 221
P+++KL G C +D LL+ E+ GSL +H R
Sbjct: 86 PHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDER 145
Query: 222 SLPLPWSIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDG 281
+L + + A ++G+ +L AE +++RD NIL+ K+SDFGL++D
Sbjct: 146 ALTM--GDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDV 200
Query: 282 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
E D ++ + A E + T +SDV+SFGV+L E++T
Sbjct: 201 YEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 98/204 (48%), Gaps = 15/204 (7%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
+GEG +G VYK + G L + + ++ E++ L L HPN
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-------EISLLKELNHPN 63
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALDAAKGLAFLHEE 247
+VKL+ +++ LV+EF+ L++ + +L +P + +GLAF H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFL-HQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM- 306
V++RD K N+L++ E KL+DFGLA+ +T+ V T Y APE ++
Sbjct: 123 R---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLG 177
Query: 307 TGHLTAKSDVYSFGVVLLEMLTGR 330
+ + D++S G + EM+T R
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 115/293 (39%), Gaps = 50/293 (17%)
Query: 128 LLGEGGFGCVYKGWINMNGTA--TVKPGTGLPVAVKTLNHDGLQGHKEWL-AEVNYLGGL 184
+LG G FG V MN TA K G + VAVK L +E L +E+ + L
Sbjct: 52 VLGSGAFGKV------MNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQL 105
Query: 185 -IHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP------------------- 224
H N+V L+G C L++E+ G L N+L +
Sbjct: 106 GSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEED 165
Query: 225 ---LPWSIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDG 281
L + + A AKG+ FL K ++RD N+L+ K+ DFGLA+D
Sbjct: 166 LNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARDI 222
Query: 282 PEGDKTHVSTRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGE 341
V + APE + G T KSDV+S+G++L E+ S+ N
Sbjct: 223 MSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIF----SLGVN----- 273
Query: 342 HNLVEWARPQLGERRRFYRLIDPCLEGCFSIKGAEKTIQLAASCLNRDQKARP 394
P + FY+LI + E+ + SC D + RP
Sbjct: 274 ------PYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRP 320
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 97/224 (43%), Gaps = 31/224 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWL-AEVNYLGGL-IH 186
LG G FG V + K L VAVK L KE L +E+ + L H
Sbjct: 39 LGAGAFGKV----VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 94
Query: 187 PNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPL--------------------P 226
N+V L+G C L++ E+ G L N L R++ + P
Sbjct: 95 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRP 154
Query: 227 WSIR--MKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEG 284
+R + + A+G+AFL A K I+RD N+LL + AK+ DFGLA+D
Sbjct: 155 LELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND 211
Query: 285 DKTHVSTRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
V + APE + T +SDV+S+G++L E+ +
Sbjct: 212 SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 76/150 (50%), Gaps = 8/150 (5%)
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLH 245
HP LV L C + + V E++ G L H+ +R LP + + + L +LH
Sbjct: 112 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHM-QRQRKLPEEHARFYSAEISLALNYLH 170
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPE-GDKTHVSTRVMGTYGYAAPEY 304
E + +IYRD K N+LLD E + KL+D+G+ K+G GD T + GT Y APE
Sbjct: 171 E---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---STFCGTPNYIAPEI 224
Query: 305 VMTGHLTAKSDVYSFGVVLLEMLTGRRSMD 334
+ D ++ GV++ EM+ GR D
Sbjct: 225 LRGEDYGFSVDWWALGVLMFEMMAGRSPFD 254
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 97/204 (47%), Gaps = 15/204 (7%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
+GEG +G VYK + G L + + ++ E++ L L HPN
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-------EISLLKELNHPN 66
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALDAAKGLAFLHEE 247
+VKL+ +++ LV+EF+ L+ + +L +P + +GLAF H
Sbjct: 67 IVKLLDVIHTENKLYLVFEFL-HQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM- 306
V++RD K N+L++ E KL+DFGLA+ +T+ V T Y APE ++
Sbjct: 126 R---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLG 180
Query: 307 TGHLTAKSDVYSFGVVLLEMLTGR 330
+ + D++S G + EM+T R
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 97/204 (47%), Gaps = 15/204 (7%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
+GEG +G VYK + G L + + ++ E++ L L HPN
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-------EISLLKELNHPN 65
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALDAAKGLAFLHEE 247
+VKL+ +++ LV+EF+ L+ + +L +P + +GLAF H
Sbjct: 66 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM- 306
V++RD K N+L++ E KL+DFGLA+ +T+ V T Y APE ++
Sbjct: 125 R---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLG 179
Query: 307 TGHLTAKSDVYSFGVVLLEMLTGR 330
+ + D++S G + EM+T R
Sbjct: 180 CKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 98/204 (48%), Gaps = 15/204 (7%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
+GEG +G VYK + G L + + ++ E++ L L HPN
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-------EISLLKELNHPN 66
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALDAAKGLAFLHEE 247
+VKL+ +++ LV+EF+ L++ + +L +P + +GLAF H
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM- 306
V++RD K N+L++ E KL+DFGLA+ +T+ V T Y APE ++
Sbjct: 126 R---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLG 180
Query: 307 TGHLTAKSDVYSFGVVLLEMLTGR 330
+ + D++S G + EM+T R
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 76/150 (50%), Gaps = 8/150 (5%)
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLH 245
HP LV L C + + V E++ G L H+ +R LP + + + L +LH
Sbjct: 80 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHM-QRQRKLPEEHARFYSAEISLALNYLH 138
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPE-GDKTHVSTRVMGTYGYAAPEY 304
E + +IYRD K N+LLD E + KL+D+G+ K+G GD T + GT Y APE
Sbjct: 139 E---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYIAPEI 192
Query: 305 VMTGHLTAKSDVYSFGVVLLEMLTGRRSMD 334
+ D ++ GV++ EM+ GR D
Sbjct: 193 LRGEDYGFSVDWWALGVLMFEMMAGRSPFD 222
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 97/204 (47%), Gaps = 15/204 (7%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
+GEG +G VYK + G L + + ++ E++ L L HPN
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-------EISLLKELNHPN 66
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALDAAKGLAFLHEE 247
+VKL+ +++ LV+EF+ L+ + +L +P + +GLAF H
Sbjct: 67 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM- 306
V++RD K N+L++ E KL+DFGLA+ +T+ V T Y APE ++
Sbjct: 126 R---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLG 180
Query: 307 TGHLTAKSDVYSFGVVLLEMLTGR 330
+ + D++S G + EM+T R
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 97/204 (47%), Gaps = 15/204 (7%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
+GEG +G VYK + G L + + ++ E++ L L HPN
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-------EISLLKELNHPN 65
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALDAAKGLAFLHEE 247
+VKL+ +++ LV+EF+ L+ + +L +P + +GLAF H
Sbjct: 66 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM- 306
V++RD K N+L++ E KL+DFGLA+ +T+ V T Y APE ++
Sbjct: 125 R---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLG 179
Query: 307 TGHLTAKSDVYSFGVVLLEMLTGR 330
+ + D++S G + EM+T R
Sbjct: 180 CKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 99/226 (43%), Gaps = 35/226 (15%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDG-LQGHKEWLAEVNYLGGLIHP 187
+GEG FG V++ G +P T VAVK L + ++ E + +P
Sbjct: 55 IGEGAFGRVFQA--RAPGLLPYEPFTM--VAVKMLKEEASADMQADFQREAALMAEFDNP 110
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSL------------------------ 223
N+VKL+G C L++E+M G L F RS+
Sbjct: 111 NIVKLLGVCAVGKPMCLLFEYMAYGDLNE--FLRSMSPHTVCSLSHSDLSTRARVSSPGP 168
Query: 224 -PLPWSIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGP 282
PL + ++ IA A G+A+L +E+ ++RD T N L+ K++DFGL+++
Sbjct: 169 PPLSCAEQLCIARQVAAGMAYL---SERKFVHRDLATRNCLVGENMVVKIADFGLSRNIY 225
Query: 283 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
D + PE + T +SDV+++GVVL E+ +
Sbjct: 226 SADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 107/211 (50%), Gaps = 25/211 (11%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNH-DGLQGHKEWLAEVNYLGGLIH 186
++G+G FG VY +G + + A+K+L+ +Q + +L E + GL H
Sbjct: 28 VIGKGHFGVVY------HGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNH 81
Query: 187 PNLVKLIGCCIEDD---QRLLVYEFMPRGSLENHLFRRSLPLPWSIR--MKIALDAAKGL 241
PN++ LIG + + LL Y M G L F RS +++ + L A+G+
Sbjct: 82 PNVLALIGIMLPPEGLPHVLLPY--MCHGDLLQ--FIRSPQRNPTVKDLISFGLQVARGM 137
Query: 242 AFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGD----KTHVSTRVMGTY 297
+L AE+ ++RD N +LD + K++DFGLA+D + + + H R+
Sbjct: 138 EYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARL--PV 192
Query: 298 GYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ A E + T T KSDV+SFGV+L E+LT
Sbjct: 193 KWTALESLQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 98/204 (48%), Gaps = 15/204 (7%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
+GEG +G VYK + G L + + ++ E++ L L HPN
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-------EISLLKELNHPN 65
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALDAAKGLAFLHEE 247
+VKL+ +++ LV+EF+ L++ + +L +P + +GLAF H
Sbjct: 66 IVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM- 306
V++RD K N+L++ E KL+DFGLA+ +T+ V T Y APE ++
Sbjct: 125 R---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLG 179
Query: 307 TGHLTAKSDVYSFGVVLLEMLTGR 330
+ + D++S G + EM+T R
Sbjct: 180 CKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 97/204 (47%), Gaps = 15/204 (7%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
+GEG +G VYK + G L + + ++ E++ L L HPN
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-------EISLLKELNHPN 63
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALDAAKGLAFLHEE 247
+VKL+ +++ LV+EF+ L+ + +L +P + +GLAF H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM- 306
V++RD K N+L++ E KL+DFGLA+ +T+ V T Y APE ++
Sbjct: 123 R---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLG 177
Query: 307 TGHLTAKSDVYSFGVVLLEMLTGR 330
+ + D++S G + EM+T R
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 97/204 (47%), Gaps = 15/204 (7%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
+GEG +G VYK + G L + + ++ E++ L L HPN
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-------EISLLKELNHPN 65
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALDAAKGLAFLHEE 247
+VKL+ +++ LV+EF+ L+ + +L +P + +GLAF H
Sbjct: 66 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM- 306
V++RD K N+L++ E KL+DFGLA+ +T+ V T Y APE ++
Sbjct: 125 R---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLG 179
Query: 307 TGHLTAKSDVYSFGVVLLEMLTGR 330
+ + D++S G + EM+T R
Sbjct: 180 CKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 97/204 (47%), Gaps = 15/204 (7%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
+GEG +G VYK + G L + + ++ E++ L L HPN
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-------EISLLKELNHPN 63
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALDAAKGLAFLHEE 247
+VKL+ +++ LV+EF+ L+ + +L +P + +GLAF H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM- 306
V++RD K N+L++ E KL+DFGLA+ +T+ V T Y APE ++
Sbjct: 123 R---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLG 177
Query: 307 TGHLTAKSDVYSFGVVLLEMLTGR 330
+ + D++S G + EM+T R
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 97/204 (47%), Gaps = 15/204 (7%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
+GEG +G VYK + G L + + ++ E++ L L HPN
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-------EISLLKELNHPN 66
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALDAAKGLAFLHEE 247
+VKL+ +++ LV+EF+ L+ + +L +P + +GLAF H
Sbjct: 67 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM- 306
V++RD K N+L++ E KL+DFGLA+ +T+ V T Y APE ++
Sbjct: 126 R---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLG 180
Query: 307 TGHLTAKSDVYSFGVVLLEMLTGR 330
+ + D++S G + EM+T R
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 97/204 (47%), Gaps = 15/204 (7%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
+GEG +G VYK + G L + + ++ E++ L L HPN
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-------EISLLKELNHPN 62
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALDAAKGLAFLHEE 247
+VKL+ +++ LV+EF+ L+ + +L +P + +GLAF H
Sbjct: 63 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM- 306
V++RD K N+L++ E KL+DFGLA+ +T+ V T Y APE ++
Sbjct: 122 R---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLG 176
Query: 307 TGHLTAKSDVYSFGVVLLEMLTGR 330
+ + D++S G + EM+T R
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 97/204 (47%), Gaps = 15/204 (7%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
+GEG +G VYK + G L + + ++ E++ L L HPN
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-------EISLLKELNHPN 64
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALDAAKGLAFLHEE 247
+VKL+ +++ LV+EF+ L+ + +L +P + +GLAF H
Sbjct: 65 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM- 306
V++RD K N+L++ E KL+DFGLA+ +T+ V T Y APE ++
Sbjct: 124 R---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLG 178
Query: 307 TGHLTAKSDVYSFGVVLLEMLTGR 330
+ + D++S G + EM+T R
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 97/204 (47%), Gaps = 15/204 (7%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
+GEG +G VYK + G L + + ++ E++ L L HPN
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-------EISLLKELNHPN 64
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALDAAKGLAFLHEE 247
+VKL+ +++ LV+EF+ L+ + +L +P + +GLAF H
Sbjct: 65 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM- 306
V++RD K N+L++ E KL+DFGLA+ +T+ V T Y APE ++
Sbjct: 124 R---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLG 178
Query: 307 TGHLTAKSDVYSFGVVLLEMLTGR 330
+ + D++S G + EM+T R
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 97/204 (47%), Gaps = 15/204 (7%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
+GEG +G VYK + G L + + ++ E++ L L HPN
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-------EISLLKELNHPN 63
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALDAAKGLAFLHEE 247
+VKL+ +++ LV+EF+ L+ + +L +P + +GLAF H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM- 306
V++RD K N+L++ E KL+DFGLA+ +T+ V T Y APE ++
Sbjct: 123 R---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLG 177
Query: 307 TGHLTAKSDVYSFGVVLLEMLTGR 330
+ + D++S G + EM+T R
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 97/204 (47%), Gaps = 15/204 (7%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
+GEG +G VYK + G L + + ++ E++ L L HPN
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-------EISLLKELNHPN 63
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALDAAKGLAFLHEE 247
+VKL+ +++ LV+EF+ L+ + +L +P + +GLAF H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM- 306
V++RD K N+L++ E KL+DFGLA+ +T+ V T Y APE ++
Sbjct: 123 R---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLG 177
Query: 307 TGHLTAKSDVYSFGVVLLEMLTGR 330
+ + D++S G + EM+T R
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 97/204 (47%), Gaps = 15/204 (7%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
+GEG +G VYK + G L + + ++ E++ L L HPN
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-------EISLLKELNHPN 64
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALDAAKGLAFLHEE 247
+VKL+ +++ LV+EF+ L+ + +L +P + +GLAF H
Sbjct: 65 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM- 306
V++RD K N+L++ E KL+DFGLA+ +T+ V T Y APE ++
Sbjct: 124 R---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLG 178
Query: 307 TGHLTAKSDVYSFGVVLLEMLTGR 330
+ + D++S G + EM+T R
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 97/204 (47%), Gaps = 15/204 (7%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
+GEG +G VYK + G L + + ++ E++ L L HPN
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-------EISLLKELNHPN 67
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALDAAKGLAFLHEE 247
+VKL+ +++ LV+EF+ L+ + +L +P + +GLAF H
Sbjct: 68 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 126
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM- 306
V++RD K N+L++ E KL+DFGLA+ +T+ V T Y APE ++
Sbjct: 127 R---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLG 181
Query: 307 TGHLTAKSDVYSFGVVLLEMLTGR 330
+ + D++S G + EM+T R
Sbjct: 182 CKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 76/150 (50%), Gaps = 8/150 (5%)
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLH 245
HP LV L C + + V E++ G L H+ +R LP + + + L +LH
Sbjct: 65 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHM-QRQRKLPEEHARFYSAEISLALNYLH 123
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPE-GDKTHVSTRVMGTYGYAAPEY 304
E + +IYRD K N+LLD E + KL+D+G+ K+G GD T + GT Y APE
Sbjct: 124 E---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYIAPEI 177
Query: 305 VMTGHLTAKSDVYSFGVVLLEMLTGRRSMD 334
+ D ++ GV++ EM+ GR D
Sbjct: 178 LRGEDYGFSVDWWALGVLMFEMMAGRSPFD 207
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 97/204 (47%), Gaps = 15/204 (7%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
+GEG +G VYK + G L + + ++ E++ L L HPN
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-------EISLLKELNHPN 62
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALDAAKGLAFLHEE 247
+VKL+ +++ LV+EF+ L+ + +L +P + +GLAF H
Sbjct: 63 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM- 306
V++RD K N+L++ E KL+DFGLA+ +T+ V T Y APE ++
Sbjct: 122 R---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLG 176
Query: 307 TGHLTAKSDVYSFGVVLLEMLTGR 330
+ + D++S G + EM+T R
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 96/204 (47%), Gaps = 15/204 (7%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
+GEG +G VYK + G L + + ++ E++ L L HPN
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-------EISLLKELNHPN 63
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALDAAKGLAFLHEE 247
+VKL+ +++ LV+EF+ L+ + +L +P + +GL+F H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSH 122
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM- 306
V++RD K N+L++ E KL+DFGLA+ G T + T Y APE ++
Sbjct: 123 R---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYRAPEILLG 177
Query: 307 TGHLTAKSDVYSFGVVLLEMLTGR 330
+ + D++S G + EM+T R
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 75/150 (50%), Gaps = 8/150 (5%)
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLH 245
HP LV L C + + V E++ G L H+ +R LP + + + L +LH
Sbjct: 69 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHM-QRQRKLPEEHARFYSAEISLALNYLH 127
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPE-GDKTHVSTRVMGTYGYAAPEY 304
E +IYRD K N+LLD E + KL+D+G+ K+G GD T + GT Y APE
Sbjct: 128 ERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYIAPEI 181
Query: 305 VMTGHLTAKSDVYSFGVVLLEMLTGRRSMD 334
+ D ++ GV++ EM+ GR D
Sbjct: 182 LRGEDYGFSVDWWALGVLMFEMMAGRSPFD 211
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 108/221 (48%), Gaps = 36/221 (16%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLN-HDGLQGHKEWLAEVNYLGGL-I 185
++GEG FG V K I K G + A+K + + H+++ E+ L L
Sbjct: 22 VIGEGNFGQVLKARIK-------KDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 74
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPL----PWSIR----------- 230
HPN++ L+G C L E+ P G+L + L R+S L ++I
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL-RKSRVLETDPAFAIANSTASTLSSQQ 133
Query: 231 -MKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHV 289
+ A D A+G+ +L ++K I+RD NIL+ Y AK++DFGL++ G + +V
Sbjct: 134 LLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR----GQEVYV 186
Query: 290 STRVMGT--YGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ MG + A E + T SDV+S+GV+L E+++
Sbjct: 187 K-KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 97/204 (47%), Gaps = 15/204 (7%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
+GEG +G VYK + G L + + ++ E++ L L HPN
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-------EISLLKELNHPN 66
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALDAAKGLAFLHEE 247
+VKL+ +++ LV+EF+ L+ + +L +P + +GLAF H
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM- 306
V++RD K N+L++ E KL+DFGLA+ +T+ V T Y APE ++
Sbjct: 126 R---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLG 180
Query: 307 TGHLTAKSDVYSFGVVLLEMLTGR 330
+ + D++S G + EM+T R
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 97/202 (48%), Gaps = 13/202 (6%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG G FG V KG+ M L N L+ E LAE N + L +P
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILK---NEANDPALKD--ELLAEANVMQQLDNPY 73
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEEA 248
+V++IG C E + +LV E G L +L + +I +++ + G+ +L E
Sbjct: 74 IVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-IELVHQVSMGMKYLEE-- 129
Query: 249 EKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY--GYAAPEYVM 306
++RD N+LL ++ AK+SDFGL+K D+ + G + + APE +
Sbjct: 130 -SNFVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENXYKAQTHGKWPVKWYAPECIN 187
Query: 307 TGHLTAKSDVYSFGVVLLEMLT 328
++KSDV+SFGV++ E +
Sbjct: 188 YYKFSSKSDVWSFGVLMWEAFS 209
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 108/221 (48%), Gaps = 36/221 (16%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLN-HDGLQGHKEWLAEVNYLGGL-I 185
++GEG FG V K I K G + A+K + + H+++ E+ L L
Sbjct: 32 VIGEGNFGQVLKARIK-------KDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 84
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPL----PWSIR----------- 230
HPN++ L+G C L E+ P G+L + L R+S L ++I
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL-RKSRVLETDPAFAIANSTASTLSSQQ 143
Query: 231 -MKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHV 289
+ A D A+G+ +L ++K I+RD NIL+ Y AK++DFGL++ G + +V
Sbjct: 144 LLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR----GQEVYV 196
Query: 290 STRVMGTY--GYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ MG + A E + T SDV+S+GV+L E+++
Sbjct: 197 K-KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 97/204 (47%), Gaps = 15/204 (7%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
+GEG +G VYK + G L + + ++ E++ L L HPN
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-------EISLLKELNHPN 64
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALDAAKGLAFLHEE 247
+VKL+ +++ LV+EF+ L+ + +L +P + +GLAF H
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM- 306
V++RD K N+L++ E KL+DFGLA+ +T+ V T Y APE ++
Sbjct: 124 R---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLG 178
Query: 307 TGHLTAKSDVYSFGVVLLEMLTGR 330
+ + D++S G + EM+T R
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 94/206 (45%), Gaps = 19/206 (9%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEW---LAEVNYLG-G 183
+LG+G FG V A VK TG AVK L D + + + E L
Sbjct: 30 VLGKGSFGKVM--------LARVKE-TGDLYAVKVLKKDVILQDDDVECTMTEKRILSLA 80
Query: 184 LIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAF 243
HP L +L C D+ V EF+ G L H+ ++S + A + L F
Sbjct: 81 RNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHI-QKSRRFDEARARFYAAEIISALMF 139
Query: 244 LHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 303
LH+ K +IYRD K N+LLD E + KL+DFG+ K+G T + GT Y APE
Sbjct: 140 LHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVT--TATFCGTPDYIAPE 194
Query: 304 YVMTGHLTAKSDVYSFGVVLLEMLTG 329
+ D ++ GV+L EML G
Sbjct: 195 ILQEMLYGPAVDWWAMGVLLYEMLCG 220
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 103/210 (49%), Gaps = 15/210 (7%)
Query: 123 FRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGL-QGHKEWLAEVNYL 181
+ E ++G G FG V G + + G + VA+KTL + +++L+E + +
Sbjct: 16 IKIEKVIGVGEFGEVCSGRLKVPGKREI------CVAIKTLKAGYTDKQRRDFLSEASIM 69
Query: 182 GGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGL 241
G HPN++ L G + +++ E+M GSL+ L + + + G+
Sbjct: 70 GQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGM 129
Query: 242 AFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAK---DGPEGDKTHVSTRVMGTYG 298
+L ++ ++RD NIL++ K+SDFG+++ D PE T ++
Sbjct: 130 KYL---SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKI--PIR 184
Query: 299 YAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ APE + T+ SDV+S+G+V+ E+++
Sbjct: 185 WTAPEAIAYRKFTSASDVWSYGIVMWEVMS 214
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 125/288 (43%), Gaps = 39/288 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
+G G FG VYKG +G VK + V + Q + EV L H N
Sbjct: 44 IGSGSFGTVYKG--KWHGDVAVKI-----LKVVDPTPEQFQAFRN---EVAVLRKTRHVN 93
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEEA 248
++ +G +D+ +V ++ SL HL + + IA A+G+ +LH
Sbjct: 94 ILLFMGYMTKDN-LAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHA-- 150
Query: 249 EKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG 308
K +I+RD K++NI L K+ DFGLA + + G+ + APE +
Sbjct: 151 -KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQ 209
Query: 309 H---LTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVE-----WARPQLGERRRFYR 360
+ +SDVYS+G+VL E++TG + + N ++ +A P L +
Sbjct: 210 DNNPFSFQSDVYSYGIVLYELMTG--ELPYSHINNRDQIIFMVGRGYASPDLS------K 261
Query: 361 LIDPCLEGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPLPY 408
L C + +L A C+ + ++ RP +++ +++ L +
Sbjct: 262 LYKNC---------PKAMKRLVADCVKKVKEERPLFPQILSSIELLQH 300
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 94/215 (43%), Gaps = 27/215 (12%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKE-WLAEVNYLGGLIHP 187
LG GGFG V + WI+ + TG VA+K + ++E W E+ + L HP
Sbjct: 22 LGTGGFGYVLR-WIHQD--------TGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHP 72
Query: 188 NLVKL------IGCCIEDDQRLLVYEFMPRGSLENHL--FRRSLPLPWSIRMKIALDAAK 239
N+V + +D LL E+ G L +L F L + D +
Sbjct: 73 NVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISS 132
Query: 240 GLAFLHEEAEKPVIYRDFKTSNILLD---GEYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 296
L +LHE +I+RD K NI+L K+ D G AK E D+ + T +GT
Sbjct: 133 ALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAK---ELDQGELCTEFVGT 186
Query: 297 YGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTGRR 331
Y APE + T D +SFG + E +TG R
Sbjct: 187 LQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFR 221
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 94/215 (43%), Gaps = 27/215 (12%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKE-WLAEVNYLGGLIHP 187
LG GGFG V + WI+ + TG VA+K + ++E W E+ + L HP
Sbjct: 23 LGTGGFGYVLR-WIHQD--------TGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHP 73
Query: 188 NLVKL------IGCCIEDDQRLLVYEFMPRGSLENHL--FRRSLPLPWSIRMKIALDAAK 239
N+V + +D LL E+ G L +L F L + D +
Sbjct: 74 NVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISS 133
Query: 240 GLAFLHEEAEKPVIYRDFKTSNILLD---GEYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 296
L +LHE +I+RD K NI+L K+ D G AK E D+ + T +GT
Sbjct: 134 ALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAK---ELDQGELCTEFVGT 187
Query: 297 YGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTGRR 331
Y APE + T D +SFG + E +TG R
Sbjct: 188 LQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFR 222
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 103/210 (49%), Gaps = 15/210 (7%)
Query: 123 FRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGL-QGHKEWLAEVNYL 181
+ E ++G G FG V G + + G + VA+KTL + +++L+E + +
Sbjct: 10 IKIEKVIGVGEFGEVCSGRLKVPGKREI------CVAIKTLKAGYTDKQRRDFLSEASIM 63
Query: 182 GGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGL 241
G HPN++ L G + +++ E+M GSL+ L + + + G+
Sbjct: 64 GQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGM 123
Query: 242 AFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAK---DGPEGDKTHVSTRVMGTYG 298
+L ++ ++RD NIL++ K+SDFG+++ D PE T ++
Sbjct: 124 KYL---SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKI--PIR 178
Query: 299 YAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ APE + T+ SDV+S+G+V+ E+++
Sbjct: 179 WTAPEAIAYRKFTSASDVWSYGIVMWEVMS 208
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 119/274 (43%), Gaps = 34/274 (12%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLN-HDGLQGHKEWLAEVNYLGGLIHP 187
+G+G FG V+KG N VA+K ++ + ++ E+ L P
Sbjct: 30 IGKGSFGEVFKGIDNRTQKV---------VAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 80
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEE 247
+ K G ++D + ++ E++ GS + L PL + I + KGL +LH E
Sbjct: 81 YVTKYYGSYLKDTKLWIIMEYLGGGSALDLL--EPGPLDETQIATILREILKGLDYLHSE 138
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
+ I+RD K +N+LL KL+DFG+A G D +GT + APE +
Sbjct: 139 KK---IHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVIKQ 193
Query: 308 GHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPQLGERRRFYRLIDPCLE 367
+K+D++S G+ +E+ G + P L+ P P LE
Sbjct: 194 SAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP-------------PTLE 240
Query: 368 GCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVE 401
G +S + + +CLN++ RP E+++
Sbjct: 241 GNYS----KPLKEFVEACLNKEPSFRPTAKELLK 270
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 118/274 (43%), Gaps = 34/274 (12%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLN-HDGLQGHKEWLAEVNYLGGLIHP 187
+G+G FG VYKG N VA+K ++ + ++ E+ L P
Sbjct: 27 IGKGSFGEVYKGIDNHTKEV---------VAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 77
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEE 247
+ + G ++ + ++ E++ GS + L + PL + I + KGL +LH E
Sbjct: 78 YITRYFGSYLKSTKLWIIMEYLGGGSALDLL--KPGPLEETYIATILREILKGLDYLHSE 135
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
+ I+RD K +N+LL + + KL+DFG+A G D +GT + APE +
Sbjct: 136 RK---IHRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVIKQ 190
Query: 308 GHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPQLGERRRFYRLIDPCLE 367
K+D++S G+ +E+ G P L+ P P LE
Sbjct: 191 SAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSP-------------PTLE 237
Query: 368 GCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVE 401
G S E +CLN+D + RP E+++
Sbjct: 238 GQHSKPFKE----FVEACLNKDPRFRPTAKELLK 267
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 103/203 (50%), Gaps = 17/203 (8%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHK-EWLAEVNYLGGLIHP 187
LG G G V+K + KP +GL +A K ++ + + + + E+ L P
Sbjct: 76 LGAGNGGVVFK--------VSHKP-SGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSP 126
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEE 247
+V G D + + E M GSL + + +++ +P I K+++ KGL +L E+
Sbjct: 127 YIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 185
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
+ +++RD K SNIL++ KL DFG++ + ++ +GT Y +PE +
Sbjct: 186 HK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQG 239
Query: 308 GHLTAKSDVYSFGVVLLEMLTGR 330
H + +SD++S G+ L+EM GR
Sbjct: 240 THYSVQSDIWSMGLSLVEMAVGR 262
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 103/241 (42%), Gaps = 18/241 (7%)
Query: 110 KFSFNELKSATK-SFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGL 168
++ + E + TK +FR +LG+GGFG V + G K
Sbjct: 172 QWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMA 231
Query: 169 QGHKEWLAEVN--YLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP-L 225
K+ L +VN ++ L + K D LV M G L+ H++
Sbjct: 232 LNEKQILEKVNSRFVVSLAYAYETK--------DALCLVLTLMNGGDLKFHIYHMGQAGF 283
Query: 226 PWSIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGD 285
P + + A + GL LH E ++YRD K NILLD + ++SD GLA PEG
Sbjct: 284 PEARAVFYAAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ 340
Query: 286 KTHVSTRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLV 345
+ RV GT GY APE V T D ++ G +L EM+ G+ + + + V
Sbjct: 341 T--IKGRV-GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEV 397
Query: 346 E 346
E
Sbjct: 398 E 398
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 116/269 (43%), Gaps = 37/269 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG G FG V G K VA+K + +G E++ E + L H
Sbjct: 32 LGTGQFGVVKYG----------KWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEK 80
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEEA 248
LV+L G C + ++ E+M G L N+L +++ D + + +L
Sbjct: 81 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE--- 137
Query: 249 EKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG 308
K ++RD N L++ + K+SDFGL++ + ++T S ++ PE +M
Sbjct: 138 SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETS-SVGSKFPVRWSPPEVLMYS 196
Query: 309 HLTAKSDVYSFGVVLLEMLT-GRRSMDK--NRPNGEHNLVEWARPQLGERRRFYRLIDPC 365
++KSD+++FGV++ E+ + G+ ++ N EH + + R YR P
Sbjct: 197 KFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEH---------IAQGLRLYR---PH 244
Query: 366 LEGCFSIKGAEKTIQLAASCLNRDQKARP 394
L +EK + SC + RP
Sbjct: 245 L-------ASEKVYTIMYSCWHEKADERP 266
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 96/220 (43%), Gaps = 19/220 (8%)
Query: 115 ELKSATKSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEW 174
++K + F +LG+G FG V+ A K T A+K L D + +
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVF--------LAEFK-KTNQFFAIKALKKDVVLMDDDV 62
Query: 175 ---LAEVNYLG-GLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIR 230
+ E L HP L + + V E++ G L H+ + S
Sbjct: 63 ECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI-QSCHKFDLSRA 121
Query: 231 MKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVS 290
A + GL FLH K ++YRD K NILLD + + K++DFG+ K+ GD +
Sbjct: 122 TFYAAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK--T 176
Query: 291 TRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTGR 330
GT Y APE ++ D +SFGV+L EML G+
Sbjct: 177 NEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 216
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 114/239 (47%), Gaps = 24/239 (10%)
Query: 100 EELKISPQLRKFSFNELKSATK-------SFRPECLLGEGGFGCVYKGWINMNGTATVKP 152
EEL++ Q RK L K F LG G G V+K + KP
Sbjct: 5 EELELDEQQRKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFK--------VSHKP 56
Query: 153 GTGLPVAVKTLNHDGLQGHK-EWLAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPR 211
+GL +A K ++ + + + + E+ L P +V G D + + E M
Sbjct: 57 -SGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDG 115
Query: 212 GSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAK 271
GSL + + +++ +P I K+++ KGL +L E+ + +++RD K SNIL++ K
Sbjct: 116 GSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIK 172
Query: 272 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTGR 330
L DFG++ + ++ +GT Y +PE + H + +SD++S G+ L+EM GR
Sbjct: 173 LCDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 227
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 103/241 (42%), Gaps = 18/241 (7%)
Query: 110 KFSFNELKSATK-SFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGL 168
++ + E + TK +FR +LG+GGFG V + G K
Sbjct: 172 QWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMA 231
Query: 169 QGHKEWLAEVN--YLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP-L 225
K+ L +VN ++ L + K D LV M G L+ H++
Sbjct: 232 LNEKQILEKVNSRFVVSLAYAYETK--------DALCLVLTLMNGGDLKFHIYHMGQAGF 283
Query: 226 PWSIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGD 285
P + + A + GL LH E ++YRD K NILLD + ++SD GLA PEG
Sbjct: 284 PEARAVFYAAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ 340
Query: 286 KTHVSTRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLV 345
+ RV GT GY APE V T D ++ G +L EM+ G+ + + + V
Sbjct: 341 T--IKGRV-GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEV 397
Query: 346 E 346
E
Sbjct: 398 E 398
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 124/288 (43%), Gaps = 40/288 (13%)
Query: 121 KSFRPECL------LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLN-HDGLQGHKE 173
+S PE L +G+G FG V+KG N VA+K ++ + ++
Sbjct: 21 QSMDPEELFTKLEKIGKGSFGEVFKGIDNRTQKV---------VAIKIIDLEEAEDEIED 71
Query: 174 WLAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKI 233
E+ L P + K G ++D + ++ E++ GS + L PL + I
Sbjct: 72 IQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL--EPGPLDETQIATI 129
Query: 234 ALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRV 293
+ KGL +LH E + I+RD K +N+LL KL+DFG+A G D
Sbjct: 130 LREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNTF 184
Query: 294 MGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPQLG 353
+GT + APE + +K+D++S G+ +E+ G + P L+ P
Sbjct: 185 VGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP--- 241
Query: 354 ERRRFYRLIDPCLEGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVE 401
P LEG +S + + +CLN++ RP E+++
Sbjct: 242 ----------PTLEGNYS----KPLKEFVEACLNKEPSFRPTAKELLK 275
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 109/224 (48%), Gaps = 39/224 (17%)
Query: 132 GGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLG--GLIHPNL 189
G FGCV+K + MN VAVK LQ + W +E G+ H NL
Sbjct: 26 GRFGCVWKAQL-MNDF----------VAVKIFP---LQDKQSWQSEREIFSTPGMKHENL 71
Query: 190 VKLI-----GCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFL 244
++ I G +E + L+ F +GSL ++L + + W+ +A ++GL++L
Sbjct: 72 LQFIAAEKRGSNLEV-ELWLITAFHDKGSLTDYL--KGNIITWNELCHVAETMSRGLSYL 128
Query: 245 HE-------EAEKPVI-YRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 296
HE E KP I +RDFK+ N+LL + A L+DFGLA G + +GT
Sbjct: 129 HEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGT 188
Query: 297 YGYAAPEYVMTGHLT------AKSDVYSFGVVLLEMLTGRRSMD 334
Y APE V+ G + + D+Y+ G+VL E+++ ++ D
Sbjct: 189 RRYMAPE-VLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAAD 231
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 119/274 (43%), Gaps = 34/274 (12%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLN-HDGLQGHKEWLAEVNYLGGLIHP 187
+G+G FG V+KG N VA+K ++ + ++ E+ L P
Sbjct: 15 IGKGSFGEVFKGIDNRTQKV---------VAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 65
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEE 247
+ K G ++D + ++ E++ GS + L PL + I + KGL +LH E
Sbjct: 66 YVTKYYGSYLKDTKLWIIMEYLGGGSALDLL--EPGPLDETQIATILREILKGLDYLHSE 123
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
+ I+RD K +N+LL KL+DFG+A G D +GT + APE +
Sbjct: 124 KK---IHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVIKQ 178
Query: 308 GHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPQLGERRRFYRLIDPCLE 367
+K+D++S G+ +E+ G + P L+ P P LE
Sbjct: 179 SAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP-------------PTLE 225
Query: 368 GCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVE 401
G +S + + +CLN++ RP E+++
Sbjct: 226 GNYS----KPLKEFVEACLNKEPSFRPTAKELLK 255
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 100/214 (46%), Gaps = 36/214 (16%)
Query: 132 GGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWL--AEVNYLGGLIHPNL 189
G FGCV+K + +N VK P+ Q + W EV L G+ H N+
Sbjct: 35 GRFGCVWKAQL-LNEYVAVKI---FPI----------QDKQSWQNEYEVYSLPGMKHENI 80
Query: 190 VKLIGC----CIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLH 245
++ IG D L+ F +GSL + F ++ + W+ IA A+GLA+LH
Sbjct: 81 LQFIGAEKRGTSVDVDLWLITAFHEKGSLSD--FLKANVVSWNELCHIAETMARGLAYLH 138
Query: 246 EE------AEKPVI-YRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 298
E+ KP I +RD K+ N+LL A ++DFGLA G + +GT
Sbjct: 139 EDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRR 198
Query: 299 YAAPEYVMTGHLT------AKSDVYSFGVVLLEM 326
Y APE V+ G + + D+Y+ G+VL E+
Sbjct: 199 YMAPE-VLEGAINFQRDAFLRIDMYAMGLVLWEL 231
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 110/221 (49%), Gaps = 19/221 (8%)
Query: 111 FSFNELKSATKSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQG 170
+ ELK F LG G G V+K + KP +GL +A K ++ +
Sbjct: 1 MALGELKD--DDFEKISELGAGNGGVVFK--------VSHKP-SGLVMARKLIHLEIKPA 49
Query: 171 HK-EWLAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSI 229
+ + + E+ L P +V G D + + E M GSL + + +++ +P I
Sbjct: 50 IRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQI 108
Query: 230 RMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHV 289
K+++ KGL +L E+ + +++RD K SNIL++ KL DFG++ G D+ +
Sbjct: 109 LGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDE--M 162
Query: 290 STRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTGR 330
+ +GT Y +PE + H + +SD++S G+ L+EM GR
Sbjct: 163 ANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 119/274 (43%), Gaps = 34/274 (12%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLN-HDGLQGHKEWLAEVNYLGGLIHP 187
+G+G FG V+KG N VA+K ++ + ++ E+ L P
Sbjct: 15 IGKGSFGEVFKGIDNRTQKV---------VAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 65
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEE 247
+ K G ++D + ++ E++ GS + L PL + I + KGL +LH E
Sbjct: 66 YVTKYYGSYLKDTKLWIIMEYLGGGSALDLL--EPGPLDETQIATILREILKGLDYLHSE 123
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
+ I+RD K +N+LL KL+DFG+A G D +GT + APE +
Sbjct: 124 KK---IHRDIKAANVLLSEHGEVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVIKQ 178
Query: 308 GHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPQLGERRRFYRLIDPCLE 367
+K+D++S G+ +E+ G + P L+ P P LE
Sbjct: 179 SAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNP-------------PTLE 225
Query: 368 GCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVE 401
G +S + + +CLN++ RP E+++
Sbjct: 226 GNYS----KPLKEFVEACLNKEPSFRPTAKELLK 255
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 108/221 (48%), Gaps = 36/221 (16%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLN-HDGLQGHKEWLAEVNYLGGL-I 185
++GEG FG V K I K G + A+K + + H+++ E+ L L
Sbjct: 29 VIGEGNFGQVLKARIK-------KDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 81
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPL----PWSIR----------- 230
HPN++ L+G C L E+ P G+L + L R+S L ++I
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL-RKSRVLETDPAFAIANSTASTLSSQQ 140
Query: 231 -MKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHV 289
+ A D A+G+ +L ++K I+R+ NIL+ Y AK++DFGL++ G + +V
Sbjct: 141 LLHFAADVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSR----GQEVYV 193
Query: 290 STRVMGTY--GYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ MG + A E + T SDV+S+GV+L E+++
Sbjct: 194 K-KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 103/203 (50%), Gaps = 17/203 (8%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHK-EWLAEVNYLGGLIHP 187
LG G G V+K + KP +GL +A K ++ + + + + E+ L P
Sbjct: 14 LGAGNGGVVFK--------VSHKP-SGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSP 64
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEE 247
+V G D + + E M GSL + + +++ +P I K+++ KGL +L E+
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 123
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
+ +++RD K SNIL++ KL DFG++ + ++ +GT Y +PE +
Sbjct: 124 HK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQG 177
Query: 308 GHLTAKSDVYSFGVVLLEMLTGR 330
H + +SD++S G+ L+EM GR
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 115/269 (42%), Gaps = 37/269 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG G FG V G K VA+K + +G E++ E + L H
Sbjct: 16 LGTGQFGVVKYG----------KWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEK 64
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEEA 248
LV+L G C + ++ E+M G L N+L +++ D + + +L
Sbjct: 65 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE--- 121
Query: 249 EKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG 308
K ++RD N L++ + K+SDFGL++ + + T S ++ PE +M
Sbjct: 122 SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS-SVGSKFPVRWSPPEVLMYS 180
Query: 309 HLTAKSDVYSFGVVLLEMLT-GRRSMDK--NRPNGEHNLVEWARPQLGERRRFYRLIDPC 365
++KSD+++FGV++ E+ + G+ ++ N EH + + R YR P
Sbjct: 181 KFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEH---------IAQGLRLYR---PH 228
Query: 366 LEGCFSIKGAEKTIQLAASCLNRDQKARP 394
L +EK + SC + RP
Sbjct: 229 L-------ASEKVYTIMYSCWHEKADERP 250
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 95/211 (45%), Gaps = 29/211 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
+GEG +G VYK + G L + + ++ E++ L L HPN
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-------EISLLKELNHPN 62
Query: 189 LVKLIGCCIEDDQRLLVYE--------FMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
+VKL+ +++ LV+E FM +L +PLP + +G
Sbjct: 63 IVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTG------IPLP--LIKSYLFQLLQG 114
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
LAF H V++RD K N+L++ E KL+DFGLA+ G T + T Y
Sbjct: 115 LAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYR 169
Query: 301 APEYVM-TGHLTAKSDVYSFGVVLLEMLTGR 330
APE ++ + + D++S G + EM+T R
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 115/269 (42%), Gaps = 37/269 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG G FG V G K VA+K + +G E++ E + L H
Sbjct: 32 LGTGQFGVVKYG----------KWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEK 80
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEEA 248
LV+L G C + ++ E+M G L N+L +++ D + + +L
Sbjct: 81 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE--- 137
Query: 249 EKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG 308
K ++RD N L++ + K+SDFGL++ + + T S ++ PE +M
Sbjct: 138 SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS-SVGSKFPVRWSPPEVLMYS 196
Query: 309 HLTAKSDVYSFGVVLLEMLT-GRRSMDK--NRPNGEHNLVEWARPQLGERRRFYRLIDPC 365
++KSD+++FGV++ E+ + G+ ++ N EH + + R YR P
Sbjct: 197 KFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEH---------IAQGLRLYR---PH 244
Query: 366 LEGCFSIKGAEKTIQLAASCLNRDQKARP 394
L +EK + SC + RP
Sbjct: 245 L-------ASEKVYTIMYSCWHEKADERP 266
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 96/220 (43%), Gaps = 19/220 (8%)
Query: 115 ELKSATKSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEW 174
++K + F +LG+G FG V+ A K T A+K L D + +
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVF--------LAEFK-KTNQFFAIKALKKDVVLMDDDV 61
Query: 175 ---LAEVNYLG-GLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIR 230
+ E L HP L + + V E++ G L H+ + S
Sbjct: 62 ECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI-QSCHKFDLSRA 120
Query: 231 MKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVS 290
A + GL FLH K ++YRD K NILLD + + K++DFG+ K+ GD +
Sbjct: 121 TFYAAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK--T 175
Query: 291 TRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTGR 330
GT Y APE ++ D +SFGV+L EML G+
Sbjct: 176 NXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 215
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 103/203 (50%), Gaps = 17/203 (8%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHK-EWLAEVNYLGGLIHP 187
LG G G V+K + KP +GL +A K ++ + + + + E+ L P
Sbjct: 33 LGAGNGGVVFK--------VSHKP-SGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSP 83
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEE 247
+V G D + + E M GSL + + +++ +P I K+++ KGL +L E+
Sbjct: 84 YIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 142
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
+ +++RD K SNIL++ KL DFG++ + ++ +GT Y +PE +
Sbjct: 143 HK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQG 196
Query: 308 GHLTAKSDVYSFGVVLLEMLTGR 330
H + +SD++S G+ L+EM GR
Sbjct: 197 THYSVQSDIWSMGLSLVEMAVGR 219
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 103/203 (50%), Gaps = 17/203 (8%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHK-EWLAEVNYLGGLIHP 187
LG G G V+K + KP +GL +A K ++ + + + + E+ L P
Sbjct: 14 LGAGNGGVVFK--------VSHKP-SGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSP 64
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEE 247
+V G D + + E M GSL + + +++ +P I K+++ KGL +L E+
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 123
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
+ +++RD K SNIL++ KL DFG++ + ++ +GT Y +PE +
Sbjct: 124 HK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQG 177
Query: 308 GHLTAKSDVYSFGVVLLEMLTGR 330
H + +SD++S G+ L+EM GR
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 115/269 (42%), Gaps = 37/269 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG G FG V G K VA+K + +G E++ E + L H
Sbjct: 17 LGTGQFGVVKYG----------KWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEK 65
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEEA 248
LV+L G C + ++ E+M G L N+L +++ D + + +L
Sbjct: 66 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE--- 122
Query: 249 EKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG 308
K ++RD N L++ + K+SDFGL++ + + T S ++ PE +M
Sbjct: 123 SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS-SVGSKFPVRWSPPEVLMYS 181
Query: 309 HLTAKSDVYSFGVVLLEMLT-GRRSMDK--NRPNGEHNLVEWARPQLGERRRFYRLIDPC 365
++KSD+++FGV++ E+ + G+ ++ N EH + + R YR P
Sbjct: 182 KFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEH---------IAQGLRLYR---PH 229
Query: 366 LEGCFSIKGAEKTIQLAASCLNRDQKARP 394
L +EK + SC + RP
Sbjct: 230 L-------ASEKVYTIMYSCWHEKADERP 251
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 103/203 (50%), Gaps = 17/203 (8%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHK-EWLAEVNYLGGLIHP 187
LG G G V+K + KP +GL +A K ++ + + + + E+ L P
Sbjct: 14 LGAGNGGVVFK--------VSHKP-SGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSP 64
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEE 247
+V G D + + E M GSL + + +++ +P I K+++ KGL +L E+
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 123
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
+ +++RD K SNIL++ KL DFG++ + ++ +GT Y +PE +
Sbjct: 124 HK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQG 177
Query: 308 GHLTAKSDVYSFGVVLLEMLTGR 330
H + +SD++S G+ L+EM GR
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 115/269 (42%), Gaps = 37/269 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG G FG V G K VA+K + +G E++ E + L H
Sbjct: 12 LGTGQFGVVKYG----------KWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEK 60
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEEA 248
LV+L G C + ++ E+M G L N+L +++ D + + +L
Sbjct: 61 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE--- 117
Query: 249 EKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG 308
K ++RD N L++ + K+SDFGL++ + + T S ++ PE +M
Sbjct: 118 SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS-SVGSKFPVRWSPPEVLMYS 176
Query: 309 HLTAKSDVYSFGVVLLEMLT-GRRSMDK--NRPNGEHNLVEWARPQLGERRRFYRLIDPC 365
++KSD+++FGV++ E+ + G+ ++ N EH + + R YR P
Sbjct: 177 KFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEH---------IAQGLRLYR---PH 224
Query: 366 LEGCFSIKGAEKTIQLAASCLNRDQKARP 394
L +EK + SC + RP
Sbjct: 225 L-------ASEKVYTIMYSCWHEKADERP 246
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 118/272 (43%), Gaps = 43/272 (15%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG G FG V G K VA+K + +G E++ E + L H
Sbjct: 17 LGTGQFGVVKYG----------KWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEK 65
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEEA 248
LV+L G C + ++ E+M G L N+L +++ D + + +L
Sbjct: 66 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE--- 122
Query: 249 EKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGT---YGYAAPEYV 305
K ++RD N L++ + K+SDFGL++ D + S+R G+ ++ PE +
Sbjct: 123 SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL--DDEYTSSR--GSKFPVRWSPPEVL 178
Query: 306 MTGHLTAKSDVYSFGVVLLEMLT-GRRSMDK--NRPNGEHNLVEWARPQLGERRRFYRLI 362
M ++KSD+++FGV++ E+ + G+ ++ N EH + + R YR
Sbjct: 179 MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEH---------IAQGLRLYR-- 227
Query: 363 DPCLEGCFSIKGAEKTIQLAASCLNRDQKARP 394
P L +EK + SC + RP
Sbjct: 228 -PHL-------ASEKVYTIMYSCWHEKADERP 251
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 103/203 (50%), Gaps = 17/203 (8%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHK-EWLAEVNYLGGLIHP 187
LG G G V+K + KP +GL +A K ++ + + + + E+ L P
Sbjct: 14 LGAGNGGVVFK--------VSHKP-SGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSP 64
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEE 247
+V G D + + E M GSL + + +++ +P I K+++ KGL +L E+
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 123
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
+ +++RD K SNIL++ KL DFG++ + ++ +GT Y +PE +
Sbjct: 124 HK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQG 177
Query: 308 GHLTAKSDVYSFGVVLLEMLTGR 330
H + +SD++S G+ L+EM GR
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 103/203 (50%), Gaps = 17/203 (8%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHK-EWLAEVNYLGGLIHP 187
LG G G V+K + KP +GL +A K ++ + + + + E+ L P
Sbjct: 14 LGAGNGGVVFK--------VSHKP-SGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSP 64
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEE 247
+V G D + + E M GSL + + +++ +P I K+++ KGL +L E+
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 123
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
+ +++RD K SNIL++ KL DFG++ + ++ +GT Y +PE +
Sbjct: 124 HK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANSFVGTRSYMSPERLQG 177
Query: 308 GHLTAKSDVYSFGVVLLEMLTGR 330
H + +SD++S G+ L+EM GR
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 115/269 (42%), Gaps = 37/269 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG G FG V G K VA+K + +G E++ E + L H
Sbjct: 23 LGTGQFGVVKYG----------KWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEK 71
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEEA 248
LV+L G C + ++ E+M G L N+L +++ D + + +L
Sbjct: 72 LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE--- 128
Query: 249 EKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG 308
K ++RD N L++ + K+SDFGL++ + + T S ++ PE +M
Sbjct: 129 SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS-SVGSKFPVRWSPPEVLMYS 187
Query: 309 HLTAKSDVYSFGVVLLEMLT-GRRSMDK--NRPNGEHNLVEWARPQLGERRRFYRLIDPC 365
++KSD+++FGV++ E+ + G+ ++ N EH + + R YR P
Sbjct: 188 KFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEH---------IAQGLRLYR---PH 235
Query: 366 LEGCFSIKGAEKTIQLAASCLNRDQKARP 394
L +EK + SC + RP
Sbjct: 236 L-------ASEKVYTIMYSCWHEKADERP 257
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 83/158 (52%), Gaps = 7/158 (4%)
Query: 173 EWLAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK 232
+ + E+ L P +V G D + + E M GSL + + + + +P I K
Sbjct: 60 QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKEAKRIPEEILGK 118
Query: 233 IALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTR 292
+++ +GLA+L E+ + +++RD K SNIL++ KL DFG++ + ++
Sbjct: 119 VSIAVLRGLAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MANS 172
Query: 293 VMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTGR 330
+GT Y APE + H + +SD++S G+ L+E+ GR
Sbjct: 173 FVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGR 210
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 102/215 (47%), Gaps = 13/215 (6%)
Query: 115 ELKSATKSFRPECLLGEGGFGCVYKGW-INMNGTATVKPGTGLPVAVKTLNHDGLQGHKE 173
++KS K + LGEG F VYK N N +K + + ++ DG+ ++
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIK---KIKLGHRSEAKDGI--NRT 58
Query: 174 WLAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKI 233
L E+ L L HPN++ L+ LV++FM LE + SL L S
Sbjct: 59 ALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM-ETDLEVIIKDNSLVLTPSHIKAY 117
Query: 234 ALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRV 293
L +GL +LH+ +++RD K +N+LLD KL+DFGLAK ++ + V
Sbjct: 118 MLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV 174
Query: 294 MGTYGYAAPEYVMTGHLT-AKSDVYSFGVVLLEML 327
T Y APE + + D+++ G +L E+L
Sbjct: 175 --TRWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 89/205 (43%), Gaps = 17/205 (8%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLN---HDGLQGHKEWLAEVNYLGGLI 185
LG GG VY + + VA+K + + + K + EV+ L
Sbjct: 19 LGGGGMSTVYLAEDTI---------LNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLS 69
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLH 245
H N+V +I EDD LV E++ +L ++ PL + G+ H
Sbjct: 70 HQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHG-PLSVDTAINFTNQILDGIKHAH 128
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV 305
+ +++RD K NIL+D K+ DFG+AK E T + V+GT Y +PE
Sbjct: 129 D---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQ-TNHVLGTVQYFSPEQA 184
Query: 306 MTGHLTAKSDVYSFGVVLLEMLTGR 330
+D+YS G+VL EML G
Sbjct: 185 KGEATDECTDIYSIGIVLYEMLVGE 209
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 15/204 (7%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
+GEG +G VYK + G L + + ++ E++ L L HPN
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-------EISLLKELNHPN 66
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMKIALDAAKGLAFLHEE 247
+VKL+ +++ LV+E + + L+ + +L +P + +GLAF H
Sbjct: 67 IVKLLDVIHTENKLYLVFEHVDQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM- 306
V++RD K N+L++ E KL+DFGLA+ +T+ V T Y APE ++
Sbjct: 126 R---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLWYRAPEILLG 180
Query: 307 TGHLTAKSDVYSFGVVLLEMLTGR 330
+ + D++S G + EM+T R
Sbjct: 181 CKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 98/218 (44%), Gaps = 25/218 (11%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQG-HKEWLAEVNYLGGL-IH 186
LG G FG V I + K T VAVK L H+ ++E+ L + H
Sbjct: 26 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 187 PNLVKLIGCCIEDDQRLLVY-EFMPRGSLENHL-FRRSLPLPWSIR-------------- 230
N+V L+G C + L+V EF G+L +L +R+ +P+ +
Sbjct: 82 LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 231 MKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVS 290
+ + AKG+ FL A + I+RD NILL + K+ DFGLA+D +
Sbjct: 142 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 198
Query: 291 TRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ APE + T +SDV+SFGV+L E+ +
Sbjct: 199 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 98/218 (44%), Gaps = 25/218 (11%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQG-HKEWLAEVNYLGGL-IH 186
LG G FG V I + K T VAVK L H+ ++E+ L + H
Sbjct: 26 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 187 PNLVKLIGCCIEDDQRLLVY-EFMPRGSLENHL-FRRSLPLPWSIR-------------- 230
N+V L+G C + L+V EF G+L +L +R+ +P+ +
Sbjct: 82 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 231 MKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVS 290
+ + AKG+ FL A + I+RD NILL + K+ DFGLA+D +
Sbjct: 142 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 198
Query: 291 TRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ APE + T +SDV+SFGV+L E+ +
Sbjct: 199 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 98/218 (44%), Gaps = 25/218 (11%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQG-HKEWLAEVNYLGGL-IH 186
LG G FG V I + K T VAVK L H+ ++E+ L + H
Sbjct: 35 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 187 PNLVKLIGCCIEDDQRLLVY-EFMPRGSLENHL-FRRSLPLPWSIR-------------- 230
N+V L+G C + L+V EF G+L +L +R+ +P+ +
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 231 MKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVS 290
+ + AKG+ FL A + I+RD NILL + K+ DFGLA+D +
Sbjct: 151 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 207
Query: 291 TRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ APE + T +SDV+SFGV+L E+ +
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 90/206 (43%), Gaps = 17/206 (8%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKE---WLAEVNYLGGL 184
LLG+G FG V + TG A+K L + + E L E L
Sbjct: 158 LLGKGTFGKV---------ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS 208
Query: 185 IHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFL 244
HP L L D+ V E+ G L HL R + R A + L +L
Sbjct: 209 RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGA-EIVSALDYL 267
Query: 245 HEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEY 304
H +EK V+YRD K N++LD + + K++DFGL K+G + T + GT Y APE
Sbjct: 268 H--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT--FCGTPEYLAPEV 323
Query: 305 VMTGHLTAKSDVYSFGVVLLEMLTGR 330
+ D + GVV+ EM+ GR
Sbjct: 324 LEDNDYGRAVDWWGLGVVMYEMMCGR 349
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 90/206 (43%), Gaps = 17/206 (8%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKE---WLAEVNYLGGL 184
LLG+G FG V + TG A+K L + + E L E L
Sbjct: 155 LLGKGTFGKV---------ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS 205
Query: 185 IHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFL 244
HP L L D+ V E+ G L HL R + R A + L +L
Sbjct: 206 RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGA-EIVSALDYL 264
Query: 245 HEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEY 304
H +EK V+YRD K N++LD + + K++DFGL K+G + T + GT Y APE
Sbjct: 265 H--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT--FCGTPEYLAPEV 320
Query: 305 VMTGHLTAKSDVYSFGVVLLEMLTGR 330
+ D + GVV+ EM+ GR
Sbjct: 321 LEDNDYGRAVDWWGLGVVMYEMMCGR 346
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 98/218 (44%), Gaps = 25/218 (11%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQG-HKEWLAEVNYLGGL-IH 186
LG G FG V I + K T VAVK L H+ ++E+ L + H
Sbjct: 35 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 187 PNLVKLIGCCIEDDQRLLVY-EFMPRGSLENHL-FRRSLPLPWSIR-------------- 230
N+V L+G C + L+V EF G+L +L +R+ +P+ +
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 231 MKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVS 290
+ + AKG+ FL A + I+RD NILL + K+ DFGLA+D +
Sbjct: 151 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRK 207
Query: 291 TRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ APE + T +SDV+SFGV+L E+ +
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 97/216 (44%), Gaps = 23/216 (10%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQG-HKEWLAEVNYLGGL-IH 186
LG G FG V I + K T VAVK L H+ ++E+ L + H
Sbjct: 37 LGRGAFGQV----IEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 92
Query: 187 PNLVKLIGCCIEDDQRLLVY-EFMPRGSLENHL-FRRSLPLPWSIR------------MK 232
N+V L+G C + L+V EF G+L +L +R+ +P+ +
Sbjct: 93 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIX 152
Query: 233 IALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTR 292
+ AKG+ FL A + I+RD NILL + K+ DFGLA+D +
Sbjct: 153 YSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 209
Query: 293 VMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ APE + T +SDV+SFGV+L E+ +
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 97/214 (45%), Gaps = 21/214 (9%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQG-HKEWLAEVNYLGGL-IH 186
LG G FG V I + K T VAVK L H+ ++E+ L + H
Sbjct: 35 LGRGAFGQV----IEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 187 PNLVKLIGCCIEDDQRLLVY-EFMPRGSLENHL-FRRSLPLPWSIRMK----------IA 234
N+V L+G C + L+V EF G+L +L +R+ +P+ K +
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYS 150
Query: 235 LDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVM 294
AKG+ FL A + I+RD NILL + K+ DFGLA+D +
Sbjct: 151 FQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 207
Query: 295 GTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ APE + T +SDV+SFGV+L E+ +
Sbjct: 208 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 98/218 (44%), Gaps = 25/218 (11%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQG-HKEWLAEVNYLGGL-IH 186
LG G FG V I + K T VAVK L H+ ++E+ L + H
Sbjct: 26 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 187 PNLVKLIGCCIEDDQRLLVY-EFMPRGSLENHL-FRRSLPLPWSIR-------------- 230
N+V L+G C + L+V EF G+L +L +R+ +P+ +
Sbjct: 82 LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 231 MKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVS 290
+ + AKG+ FL A + I+RD NILL + K+ DFGLA+D +
Sbjct: 142 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 198
Query: 291 TRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ APE + T +SDV+SFGV+L E+ +
Sbjct: 199 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 97/214 (45%), Gaps = 21/214 (9%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQG-HKEWLAEVNYLGGL-IH 186
LG G FG V I + K T VAVK L H+ ++E+ L + H
Sbjct: 35 LGRGAFGQV----IEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 187 PNLVKLIGCCIEDDQRLLVY-EFMPRGSLENHL-FRRSLPLPWSIRMK----------IA 234
N+V L+G C + L+V EF G+L +L +R+ +P+ K +
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYS 150
Query: 235 LDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVM 294
AKG+ FL A + I+RD NILL + K+ DFGLA+D +
Sbjct: 151 FQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDAR 207
Query: 295 GTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ APE + T +SDV+SFGV+L E+ +
Sbjct: 208 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 98/218 (44%), Gaps = 25/218 (11%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQG-HKEWLAEVNYLGGL-IH 186
LG G FG V I + K T VAVK L H+ ++E+ L + H
Sbjct: 26 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 81
Query: 187 PNLVKLIGCCIEDDQRLLVY-EFMPRGSLENHL-FRRSLPLPWSIR-------------- 230
N+V L+G C + L+V EF G+L +L +R+ +P+ +
Sbjct: 82 LNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 141
Query: 231 MKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVS 290
+ + AKG+ FL A + I+RD NILL + K+ DFGLA+D +
Sbjct: 142 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 198
Query: 291 TRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ APE + T +SDV+SFGV+L E+ +
Sbjct: 199 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 97/217 (44%), Gaps = 24/217 (11%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQG-HKEWLAEVNYLGGL-IH 186
LG G FG V I + K T VAVK L H+ ++E+ L + H
Sbjct: 36 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 91
Query: 187 PNLVKLIGCCIEDDQRLLVY-EFMPRGSLENHL-FRRSLPLPWSIRMKIALD-------- 236
N+V L+G C + L+V EF G+L +L +R+ +P+ + D
Sbjct: 92 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLI 151
Query: 237 -----AAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVST 291
AKG+ FL A + I+RD NILL + K+ DFGLA+D +
Sbjct: 152 CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKG 208
Query: 292 RVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ APE + T +SDV+SFGV+L E+ +
Sbjct: 209 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 98/218 (44%), Gaps = 25/218 (11%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQG-HKEWLAEVNYLGGL-IH 186
LG G FG V I + K T VAVK L H+ ++E+ L + H
Sbjct: 35 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 90
Query: 187 PNLVKLIGCCIEDDQRLLVY-EFMPRGSLENHL-FRRSLPLPWSIR-------------- 230
N+V L+G C + L+V EF G+L +L +R+ +P+ +
Sbjct: 91 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 150
Query: 231 MKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVS 290
+ + AKG+ FL A + I+RD NILL + K+ DFGLA+D +
Sbjct: 151 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 207
Query: 291 TRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ APE + T +SDV+SFGV+L E+ +
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 99/213 (46%), Gaps = 22/213 (10%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHK---EWLAEVNYLGGLI 185
LG G FG V G + TG VAVK LN ++ + E+ L
Sbjct: 24 LGVGTFGKVKVGKHEL---------TGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFR 74
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLH 245
HP+++KL +V E++ G L +++ + L ++ G+ + H
Sbjct: 75 HPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNG-RLDEKESRRLFQQILSGVDYCH 133
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV 305
V++RD K N+LLD NAK++DFGL+ +G+ S G+ YAAPE V
Sbjct: 134 RHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSC---GSPNYAAPE-V 186
Query: 306 MTGHLTA--KSDVYSFGVVLLEMLTGRRSMDKN 336
++G L A + D++S GV+L +L G D +
Sbjct: 187 ISGRLYAGPEVDIWSSGVILYALLCGTLPFDDD 219
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 101/208 (48%), Gaps = 25/208 (12%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHD----GLQGHKEWLAEVNYLGGL 184
+GEG +G VYK K G VA+K + D G+ + E++ L L
Sbjct: 29 VGEGTYGVVYKA----------KDSQGRIVALKRIRLDAEDEGIPSTA--IREISLLKEL 76
Query: 185 IHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL-DAAKGLAF 243
HPN+V LI + LV+EFM + L+ L L S ++KI L +G+A
Sbjct: 77 HHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDS-QIKIYLYQLLRGVAH 134
Query: 244 LHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 303
H+ +++RD K N+L++ + KL+DFGLA+ G T + T Y AP+
Sbjct: 135 CHQHR---ILHRDLKPQNLLINSDGALKLADFGLAR--AFGIPVRSYTHEVVTLWYRAPD 189
Query: 304 YVM-TGHLTAKSDVYSFGVVLLEMLTGR 330
+M + + D++S G + EM+TG+
Sbjct: 190 VLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 98/218 (44%), Gaps = 25/218 (11%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQG-HKEWLAEVNYLGGL-IH 186
LG G FG V I + K T VAVK L H+ ++E+ L + H
Sbjct: 72 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 127
Query: 187 PNLVKLIGCCIEDDQRLLVY-EFMPRGSLENHL-FRRSLPLPWSIR-------------- 230
N+V L+G C + L+V EF G+L +L +R+ +P+ +
Sbjct: 128 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL 187
Query: 231 MKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVS 290
+ + AKG+ FL A + I+RD NILL + K+ DFGLA+D +
Sbjct: 188 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 244
Query: 291 TRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ APE + T +SDV+SFGV+L E+ +
Sbjct: 245 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 101/208 (48%), Gaps = 25/208 (12%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHD----GLQGHKEWLAEVNYLGGL 184
+GEG +G VYK K G VA+K + D G+ + E++ L L
Sbjct: 29 VGEGTYGVVYKA----------KDSQGRIVALKRIRLDAEDEGIPSTA--IREISLLKEL 76
Query: 185 IHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL-DAAKGLAF 243
HPN+V LI + LV+EFM + L+ L L S ++KI L +G+A
Sbjct: 77 HHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDS-QIKIYLYQLLRGVAH 134
Query: 244 LHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 303
H+ +++RD K N+L++ + KL+DFGLA+ G T + T Y AP+
Sbjct: 135 CHQHR---ILHRDLKPQNLLINSDGALKLADFGLAR--AFGIPVRSYTHEVVTLWYRAPD 189
Query: 304 YVM-TGHLTAKSDVYSFGVVLLEMLTGR 330
+M + + D++S G + EM+TG+
Sbjct: 190 VLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 98/235 (41%), Gaps = 17/235 (7%)
Query: 121 KSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGH---KEWLAE 177
+ F+ LLG+G F VY+ TGL VA+K ++ + + E
Sbjct: 11 EDFKVGNLLGKGSFAGVYRAE---------SIHTGLEVAIKMIDKKAMYKAGMVQRVQNE 61
Query: 178 VNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDA 237
V L HP++++L + + LV E G + +L R P +
Sbjct: 62 VKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQI 121
Query: 238 AKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY 297
G+ +LH +++RD SN+LL N K++DFGLA + H + + GT
Sbjct: 122 ITGMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGTP 176
Query: 298 GYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPQL 352
Y +PE +SDV+S G + +L GR D + N V A ++
Sbjct: 177 NYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEM 231
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 89/206 (43%), Gaps = 17/206 (8%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKE---WLAEVNYLGGL 184
LLG+G FG V + TG A+K L + + E L E L
Sbjct: 16 LLGKGTFGKV---------ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS 66
Query: 185 IHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFL 244
HP L L D+ V E+ G L HL R + R A + L +L
Sbjct: 67 RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGA-EIVSALDYL 125
Query: 245 HEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEY 304
H +EK V+YRD K N++LD + + K++DFGL K+G + T GT Y APE
Sbjct: 126 H--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXFCGTPEYLAPEV 181
Query: 305 VMTGHLTAKSDVYSFGVVLLEMLTGR 330
+ D + GVV+ EM+ GR
Sbjct: 182 LEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 89/206 (43%), Gaps = 17/206 (8%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKE---WLAEVNYLGGL 184
LLG+G FG V + TG A+K L + + E L E L
Sbjct: 15 LLGKGTFGKV---------ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS 65
Query: 185 IHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFL 244
HP L L D+ V E+ G L HL R + R A + L +L
Sbjct: 66 RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGA-EIVSALDYL 124
Query: 245 HEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEY 304
H +EK V+YRD K N++LD + + K++DFGL K+G + T GT Y APE
Sbjct: 125 H--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXFCGTPEYLAPEV 180
Query: 305 VMTGHLTAKSDVYSFGVVLLEMLTGR 330
+ D + GVV+ EM+ GR
Sbjct: 181 LEDNDYGRAVDWWGLGVVMYEMMCGR 206
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 89/206 (43%), Gaps = 17/206 (8%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKE---WLAEVNYLGGL 184
LLG+G FG V + TG A+K L + + E L E L
Sbjct: 17 LLGKGTFGKV---------ILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS 67
Query: 185 IHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFL 244
HP L L D+ V E+ G L HL R + R A + L +L
Sbjct: 68 RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGA-EIVSALDYL 126
Query: 245 HEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEY 304
H +EK V+YRD K N++LD + + K++DFGL K+G + T GT Y APE
Sbjct: 127 H--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT--MKXFCGTPEYLAPEV 182
Query: 305 VMTGHLTAKSDVYSFGVVLLEMLTGR 330
+ D + GVV+ EM+ GR
Sbjct: 183 LEDNDYGRAVDWWGLGVVMYEMMCGR 208
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 74/152 (48%), Gaps = 20/152 (13%)
Query: 187 PNLVKLIGCCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPW----SIRMKIALDAAKGL 241
P +V+L C +DD+ L +V E+MP G L N + +P W + + +ALDA +
Sbjct: 135 PWVVQLF-CAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSM 193
Query: 242 AFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAA 301
+H RD K N+LLD + KL+DFG E H T V GT Y +
Sbjct: 194 GLIH---------RDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAV-GTPDYIS 243
Query: 302 PEYVMT----GHLTAKSDVYSFGVVLLEMLTG 329
PE + + G+ + D +S GV L EML G
Sbjct: 244 PEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 275
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 95/200 (47%), Gaps = 12/200 (6%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKE-WLAEVNYLGGLIHP 187
+GEG FG V++G I M+ L VA+KT + +E +L E + HP
Sbjct: 21 IGEGQFGDVHQG-IYMS-----PENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 74
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEE 247
++VKLIG I ++ ++ E G L + L R L + + A + LA+L
Sbjct: 75 HIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLES- 132
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
K ++RD N+L+ KL DFGL++ E + +++ + APE +
Sbjct: 133 --KRFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINF 189
Query: 308 GHLTAKSDVYSFGVVLLEML 327
T+ SDV+ FGV + E+L
Sbjct: 190 RRFTSASDVWMFGVCMWEIL 209
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 95/200 (47%), Gaps = 12/200 (6%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKE-WLAEVNYLGGLIHP 187
+GEG FG V++G I M+ L VA+KT + +E +L E + HP
Sbjct: 20 IGEGQFGDVHQG-IYMS-----PENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 73
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEE 247
++VKLIG I ++ ++ E G L + L R L + + A + LA+L
Sbjct: 74 HIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLES- 131
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
K ++RD N+L+ KL DFGL++ E + +++ + APE +
Sbjct: 132 --KRFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINF 188
Query: 308 GHLTAKSDVYSFGVVLLEML 327
T+ SDV+ FGV + E+L
Sbjct: 189 RRFTSASDVWMFGVCMWEIL 208
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 95/200 (47%), Gaps = 12/200 (6%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKE-WLAEVNYLGGLIHP 187
+GEG FG V++G I M+ + VA+KT + +E +L E + HP
Sbjct: 18 IGEGQFGDVHQG-IYMS-----PENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 71
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEE 247
++VKLIG I ++ ++ E G L + L R L + + A + LA+L
Sbjct: 72 HIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLES- 129
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
K ++RD N+L+ KL DFGL++ E + +++ + APE +
Sbjct: 130 --KRFVHRDIAARNVLVSATDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINF 186
Query: 308 GHLTAKSDVYSFGVVLLEML 327
T+ SDV+ FGV + E+L
Sbjct: 187 RRFTSASDVWMFGVCMWEIL 206
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 93/200 (46%), Gaps = 12/200 (6%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKE-WLAEVNYLGGLIHP 187
+GEG FG V++G I M+ + VA+KT + +E +L E + HP
Sbjct: 18 IGEGQFGDVHQG-IYMS-----PENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 71
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEE 247
++VKLIG I ++ ++ E G L + L R L + + A + LA+L
Sbjct: 72 HIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLES- 129
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
K ++RD N+L+ KL DFGL++ + S + + APE +
Sbjct: 130 --KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPI-KWMAPESINF 186
Query: 308 GHLTAKSDVYSFGVVLLEML 327
T+ SDV+ FGV + E+L
Sbjct: 187 RRFTSASDVWMFGVCMWEIL 206
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 97/217 (44%), Gaps = 31/217 (14%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEW---LAEVNYLGGL 184
+LG+G FG V + GT A+K L D + + + E L L
Sbjct: 26 VLGKGSFGKV---------MLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALL 76
Query: 185 IHPNLVKLIGCCIEDDQRL-LVYEFMPRGSLENHL-----FRRSLPLPWSIRMKIALDAA 238
P + + C + RL V E++ G L H+ F+ + ++ + I
Sbjct: 77 DKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISI----- 131
Query: 239 KGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTR-VMGTY 297
GL FLH+ +IYRD K N++LD E + K++DFG+ K E V+TR GT
Sbjct: 132 -GLFFLHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCK---EHMMDGVTTREFCGTP 184
Query: 298 GYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTGRRSMD 334
Y APE + D +++GV+L EML G+ D
Sbjct: 185 DYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 95/200 (47%), Gaps = 12/200 (6%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKE-WLAEVNYLGGLIHP 187
+GEG FG V++G I M+ L VA+KT + +E +L E + HP
Sbjct: 18 IGEGQFGDVHQG-IYMS-----PENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 71
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEE 247
++VKLIG I ++ ++ E G L + L R L + + A + LA+L
Sbjct: 72 HIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLES- 129
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
K ++RD N+L+ KL DFGL++ E + +++ + APE +
Sbjct: 130 --KRFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINF 186
Query: 308 GHLTAKSDVYSFGVVLLEML 327
T+ SDV+ FGV + E+L
Sbjct: 187 RRFTSASDVWMFGVCMWEIL 206
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 95/200 (47%), Gaps = 12/200 (6%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKE-WLAEVNYLGGLIHP 187
+GEG FG V++G I M+ L VA+KT + +E +L E + HP
Sbjct: 46 IGEGQFGDVHQG-IYMS-----PENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 99
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEE 247
++VKLIG I ++ ++ E G L + L R L + + A + LA+L
Sbjct: 100 HIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLES- 157
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
K ++RD N+L+ KL DFGL++ E + +++ + APE +
Sbjct: 158 --KRFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINF 214
Query: 308 GHLTAKSDVYSFGVVLLEML 327
T+ SDV+ FGV + E+L
Sbjct: 215 RRFTSASDVWMFGVCMWEIL 234
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 116/257 (45%), Gaps = 23/257 (8%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
+G+G G VY + TG VA++ +N + + E+ + +PN
Sbjct: 28 IGQGASGTVYTA---------MDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 78
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEEA 248
+V + + D+ +V E++ GSL + + + + + + L FLH
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMD--EGQIAAVCRECLQALEFLHS-- 134
Query: 249 EKPVIYRDFKTSNILLDGEYNAKLSDFGL-AKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
VI+RD K+ NILL + + KL+DFG A+ PE K + ++GT + APE V
Sbjct: 135 -NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSXMVGTPYWMAPEVVTR 190
Query: 308 GHLTAKSDVYSFGVVLLEMLTGR-RSMDKNRPNGEHNLVEWARPQLGERRR----FYRLI 362
K D++S G++ +EM+ G +++N + + P+L + F +
Sbjct: 191 KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFL 250
Query: 363 DPCLEGCFSIKGAEKTI 379
+ CLE +G+ K +
Sbjct: 251 NRCLEMDVEKRGSAKEL 267
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 95/200 (47%), Gaps = 12/200 (6%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKE-WLAEVNYLGGLIHP 187
+GEG FG V++G I M+ L VA+KT + +E +L E + HP
Sbjct: 15 IGEGQFGDVHQG-IYMS-----PENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 68
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEE 247
++VKLIG I ++ ++ E G L + L R L + + A + LA+L
Sbjct: 69 HIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLES- 126
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
K ++RD N+L+ KL DFGL++ E + +++ + APE +
Sbjct: 127 --KRFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINF 183
Query: 308 GHLTAKSDVYSFGVVLLEML 327
T+ SDV+ FGV + E+L
Sbjct: 184 RRFTSASDVWMFGVCMWEIL 203
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 85/184 (46%), Gaps = 10/184 (5%)
Query: 154 TGLPVAVKTLNHDGLQ--GHKEWLAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPR 211
TG VAVK ++ L ++ EV + L HPN+VKL + LV E+
Sbjct: 39 TGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASG 98
Query: 212 GSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAK 271
G + ++L R K + + H+ K +++RD K N+LLDG+ N K
Sbjct: 99 GEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQ---KYIVHRDLKAENLLLDGDMNIK 154
Query: 272 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTA-KSDVYSFGVVLLEMLTGR 330
++DFG + + G+K G+ YAAPE + DV+S GV+L +++G
Sbjct: 155 IADFGFSNEFTVGNKLDT---FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGS 211
Query: 331 RSMD 334
D
Sbjct: 212 LPFD 215
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 95/200 (47%), Gaps = 12/200 (6%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKE-WLAEVNYLGGLIHP 187
+GEG FG V++G I M+ L VA+KT + +E +L E + HP
Sbjct: 23 IGEGQFGDVHQG-IYMS-----PENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 76
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEE 247
++VKLIG I ++ ++ E G L + L R L + + A + LA+L
Sbjct: 77 HIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLES- 134
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
K ++RD N+L+ KL DFGL++ E + +++ + APE +
Sbjct: 135 --KRFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINF 191
Query: 308 GHLTAKSDVYSFGVVLLEML 327
T+ SDV+ FGV + E+L
Sbjct: 192 RRFTSASDVWMFGVCMWEIL 211
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 95/203 (46%), Gaps = 18/203 (8%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
+G+G G VY + TG VA++ +N + + E+ + +PN
Sbjct: 28 IGQGASGTVYTA---------MDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 78
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEEA 248
+V + + D+ +V E++ GSL + + + + + + L FLH
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMD--EGQIAAVCRECLQALEFLHS-- 134
Query: 249 EKPVIYRDFKTSNILLDGEYNAKLSDFGL-AKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
VI+RD K+ NILL + + KL+DFG A+ PE K + ++GT + APE V
Sbjct: 135 -NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSEMVGTPYWMAPEVVTR 190
Query: 308 GHLTAKSDVYSFGVVLLEMLTGR 330
K D++S G++ +EM+ G
Sbjct: 191 KAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 93/220 (42%), Gaps = 29/220 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQG-HKEWLAEVNYLGGL-IH 186
LG G FG V I + K T VAVK L H+ ++E+ L + H
Sbjct: 37 LGRGAFGQV----IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHH 92
Query: 187 PNLVKLIGCCIEDDQRLLVY------------------EFMPRGSLENHLFRRSLPLPWS 228
N+V L+G C + L+V EF+P L++ L L
Sbjct: 93 LNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHL 152
Query: 229 IRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTH 288
I + AKG+ FL A + I+RD NILL + K+ DFGLA+D +
Sbjct: 153 I--CYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 207
Query: 289 VSTRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ APE + T +SDV+SFGV+L E+ +
Sbjct: 208 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 116/257 (45%), Gaps = 23/257 (8%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
+G+G G VY + TG VA++ +N + + E+ + +PN
Sbjct: 29 IGQGASGTVYTA---------MDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 79
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEEA 248
+V + + D+ +V E++ GSL + + + + + + L FLH
Sbjct: 80 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMD--EGQIAAVCRECLQALEFLHS-- 135
Query: 249 EKPVIYRDFKTSNILLDGEYNAKLSDFGL-AKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
VI+RD K+ NILL + + KL+DFG A+ PE K + ++GT + APE V
Sbjct: 136 -NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSXMVGTPYWMAPEVVTR 191
Query: 308 GHLTAKSDVYSFGVVLLEMLTGR-RSMDKNRPNGEHNLVEWARPQLGERRR----FYRLI 362
K D++S G++ +EM+ G +++N + + P+L + F +
Sbjct: 192 KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFL 251
Query: 363 DPCLEGCFSIKGAEKTI 379
+ CLE +G+ K +
Sbjct: 252 NRCLEMDVEKRGSAKEL 268
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 95/200 (47%), Gaps = 12/200 (6%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKE-WLAEVNYLGGLIHP 187
+GEG FG V++G I M+ + VA+KT + +E +L E + HP
Sbjct: 398 IGEGQFGDVHQG-IYMS-----PENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 451
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEE 247
++VKLIG I ++ ++ E G L + L R L + + A + LA+L
Sbjct: 452 HIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLES- 509
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
K ++RD N+L+ KL DFGL++ E + +++ + APE +
Sbjct: 510 --KRFVHRDIAARNVLVSATDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINF 566
Query: 308 GHLTAKSDVYSFGVVLLEML 327
T+ SDV+ FGV + E+L
Sbjct: 567 RRFTSASDVWMFGVCMWEIL 586
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 95/200 (47%), Gaps = 12/200 (6%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKE-WLAEVNYLGGLIHP 187
+GEG FG V++G I M+ + VA+KT + +E +L E + HP
Sbjct: 398 IGEGQFGDVHQG-IYMS-----PENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 451
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEE 247
++VKLIG I ++ ++ E G L + L R L + + A + LA+L
Sbjct: 452 HIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLES- 509
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
K ++RD N+L+ KL DFGL++ E + +++ + APE +
Sbjct: 510 --KRFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINF 566
Query: 308 GHLTAKSDVYSFGVVLLEML 327
T+ SDV+ FGV + E+L
Sbjct: 567 RRFTSASDVWMFGVCMWEIL 586
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 95/203 (46%), Gaps = 18/203 (8%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
+G+G G VY + TG VA++ +N + + E+ + +PN
Sbjct: 28 IGQGASGTVYTA---------MDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 78
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEEA 248
+V + + D+ +V E++ GSL + + + + + + L FLH
Sbjct: 79 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMD--EGQIAAVCRECLQALEFLHS-- 134
Query: 249 EKPVIYRDFKTSNILLDGEYNAKLSDFGL-AKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
VI+RD K+ NILL + + KL+DFG A+ PE K + ++GT + APE V
Sbjct: 135 -NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSTMVGTPYWMAPEVVTR 190
Query: 308 GHLTAKSDVYSFGVVLLEMLTGR 330
K D++S G++ +EM+ G
Sbjct: 191 KAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 95/200 (47%), Gaps = 12/200 (6%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKE-WLAEVNYLGGLIHP 187
+GEG FG V++G I M+ + VA+KT + +E +L E + HP
Sbjct: 18 IGEGQFGDVHQG-IYMS-----PENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHP 71
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEE 247
++VKLIG I ++ ++ E G L + L R L + + A + LA+L
Sbjct: 72 HIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLES- 129
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
K ++RD N+L+ KL DFGL++ E + +++ + APE +
Sbjct: 130 --KRFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINF 186
Query: 308 GHLTAKSDVYSFGVVLLEML 327
T+ SDV+ FGV + E+L
Sbjct: 187 RRFTSASDVWMFGVCMWEIL 206
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 117/274 (42%), Gaps = 34/274 (12%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLN-HDGLQGHKEWLAEVNYLGGLIHP 187
+G+G FG V+KG N T VA+K ++ + ++ E+ L
Sbjct: 31 IGKGSFGEVFKGIDNR---------TQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSS 81
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEE 247
+ K G ++ + ++ E++ GS + L R+ P + + KGL +LH E
Sbjct: 82 YVTKYYGSYLKGSKLWIIMEYLGGGSALDLL--RAGPFDEFQIATMLKEILKGLDYLHSE 139
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
+ I+RD K +N+LL + + KL+DFG+A G D +GT + APE +
Sbjct: 140 KK---IHRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVIQQ 194
Query: 308 GHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPQLGERRRFYRLIDPCLE 367
+K+D++S G+ +E+ G P L+ P P L
Sbjct: 195 SAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNP-------------PTLV 241
Query: 368 GCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVE 401
G F+ E +CLN+D RP E+++
Sbjct: 242 GDFTKSFKE----FIDACLNKDPSFRPTAKELLK 271
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 95/208 (45%), Gaps = 22/208 (10%)
Query: 127 CLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKE--WLAEVNYLGGL 184
C+LG+G FG V K + T AVK +N + L EV L L
Sbjct: 28 CMLGKGSFGEVLKCKDRI---------TQQEYAVKVINKASAKNKDTSTILREVELLKKL 78
Query: 185 IHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFL 244
HPN++KL + +V E G L + + +R +I G+ ++
Sbjct: 79 DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYM 137
Query: 245 HEEAEKPVIYRDFKTSNILLDG---EYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAA 301
H+ +++RD K NILL+ + + K+ DFGL+ + T + R+ GT Y A
Sbjct: 138 HKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN--TKMKDRI-GTAYYIA 191
Query: 302 PEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
PE V+ G K DV+S GV+L +L+G
Sbjct: 192 PE-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 103/227 (45%), Gaps = 30/227 (13%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHP 187
++G GGFG VY K TG A+K L+ ++ + E L I
Sbjct: 195 IIGRGGFGEVY---------GCRKADTGKMYAMKCLDKKRIKMKQ---GETLALNERIML 242
Query: 188 NLVKLIGC----CIE-----DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAA 238
+LV C C+ D+ + + M G L HL + + +R A +
Sbjct: 243 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEII 301
Query: 239 KGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 298
GL +H + V+YRD K +NILLD + ++SD GLA D + K H S +GT+G
Sbjct: 302 LGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSK-KKPHAS---VGTHG 354
Query: 299 YAAPEYVMTG-HLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNL 344
Y APE + G + +D +S G +L ++L G +++ +H +
Sbjct: 355 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 401
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 97/211 (45%), Gaps = 22/211 (10%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHK---EWLAEVNYLGGLI 185
LG G FG V G + TG VAVK LN ++ + E+ L
Sbjct: 19 LGVGTFGKVKIGEHQL---------TGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFR 69
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLH 245
HP+++KL +V E++ G L +++ + R ++ + + H
Sbjct: 70 HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR-RLFQQILSAVDYCH 128
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV 305
V++RD K N+LLD NAK++DFGL+ +G+ S G+ YAAPE V
Sbjct: 129 RHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC---GSPNYAAPE-V 181
Query: 306 MTGHLTA--KSDVYSFGVVLLEMLTGRRSMD 334
++G L A + D++S GV+L +L G D
Sbjct: 182 ISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 129/310 (41%), Gaps = 55/310 (17%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
+GEG G V ATV+ +G VAVK ++ Q + EV + H N
Sbjct: 159 IGEGSTGIVC--------IATVR-SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 209
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK------IALDAAKGLA 242
+V++ + D+ +V EF+ G+L + + RM + L + L+
Sbjct: 210 VVEMYNSYLVGDELWVVMEFLEGGALTD--------IVTHTRMNEEQIAAVCLAVLQALS 261
Query: 243 FLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFG----LAKDGPEGDKTHVSTRVMGTYG 298
LH + VI+RD K+ +ILL + KLSDFG ++K+ P ++GT
Sbjct: 262 VLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR------RKXLVGTPY 312
Query: 299 YAAPEYVMTGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPQLGERRRF 358
+ APE + + D++S G++++EM+ G P ++ R L R +
Sbjct: 313 WMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI---RDNLPPRLKN 369
Query: 359 YRLIDPCLEGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPLPYLKDMASSSSY 418
+ P L+G L RD R +E+++ P+L +S
Sbjct: 370 LHKVSPSLKGFLD------------RLLVRDPAQRATAAELLKH----PFLAKAGPPASI 413
Query: 419 VQAMQAERVR 428
V M+ R R
Sbjct: 414 VPLMRQNRTR 423
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 106/242 (43%), Gaps = 23/242 (9%)
Query: 100 EELKISPQLRKFSFNELKSATKSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVA 159
+ L IS +L++ ++ + F +LG+G FG V + + + VK VA
Sbjct: 3 DSLGISDELKE-KLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVK------VA 55
Query: 160 VKTLNHDGLQGH--KEWLAEVNYLGGLIHPNLVKLIGCCIEDDQR------LLVYEFMPR 211
VK L D + +E+L E + HP++ KL+G + + +++ FM
Sbjct: 56 VKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKH 115
Query: 212 GSLENHLFRRSL-----PLPWSIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDG 266
G L L + LP ++ +D A G+ +L + + I+RD N +L
Sbjct: 116 GDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYL---SSRNFIHRDLAARNCMLAE 172
Query: 267 EYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEM 326
+ ++DFGL++ GD + A E + T SDV++FGV + E+
Sbjct: 173 DMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEI 232
Query: 327 LT 328
+T
Sbjct: 233 MT 234
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 103/227 (45%), Gaps = 30/227 (13%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHP 187
++G GGFG VY K TG A+K L+ ++ + E L I
Sbjct: 196 IIGRGGFGEVY---------GCRKADTGKMYAMKCLDKKRIKMKQ---GETLALNERIML 243
Query: 188 NLVKLIGC----CIE-----DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAA 238
+LV C C+ D+ + + M G L HL + + +R A +
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEII 302
Query: 239 KGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 298
GL +H + V+YRD K +NILLD + ++SD GLA D + K H S +GT+G
Sbjct: 303 LGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSK-KKPHAS---VGTHG 355
Query: 299 YAAPEYVMTG-HLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNL 344
Y APE + G + +D +S G +L ++L G +++ +H +
Sbjct: 356 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 402
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 84/180 (46%), Gaps = 12/180 (6%)
Query: 158 VAVKTLNHDGLQGHKEWLA---EVNYLGGLIHPNLVKLIGCCIEDDQR----LLVYEFMP 210
VAVK L D + +L E L HP +V + + +V E++
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVD 99
Query: 211 RGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNA 270
+L + + P+ +++ DA + L F H+ +I+RD K +NIL+
Sbjct: 100 GVTLRD-IVHTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANILISATNAV 155
Query: 271 KLSDFGLAKD-GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
K+ DFG+A+ G+ + V+GT Y +PE + A+SDVYS G VL E+LTG
Sbjct: 156 KVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 91/211 (43%), Gaps = 20/211 (9%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQG---HKEWLAEVNYLGGLI 185
LG+G FG VY + + +A+K L L+ + EV L
Sbjct: 21 LGKGKFGNVY---------LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 71
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLH 245
HPN+++L G + + L+ E+ PRG + L + S I + A L++ H
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYIT-ELANALSYCH 130
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV 305
K VI+RD K N+LL K++DFG + P + T + GT Y PE +
Sbjct: 131 S---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMI 183
Query: 306 MTGHLTAKSDVYSFGVVLLEMLTGRRSMDKN 336
K D++S GV+ E L G+ + N
Sbjct: 184 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 214
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 96/211 (45%), Gaps = 23/211 (10%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQG---HKEWLAEVNYLGGLI 185
LGEG FG V T VA+K ++ L+ H E++YL L
Sbjct: 17 LGEGSFGKV---------KLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLR 67
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLH 245
HP+++KL ++V E+ G L +++ + R + + + H
Sbjct: 68 HPHIIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGR-RFFQQIICAIEYCH 125
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV 305
+++RD K N+LLD N K++DFGL+ +G+ S G+ YAAPE V
Sbjct: 126 RHK---IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC---GSPNYAAPE-V 178
Query: 306 MTGHLTA--KSDVYSFGVVLLEMLTGRRSMD 334
+ G L A + DV+S G+VL ML GR D
Sbjct: 179 INGKLYAGPEVDVWSCGIVLYVMLVGRLPFD 209
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 84/184 (45%), Gaps = 10/184 (5%)
Query: 154 TGLPVAVKTLNHDGLQGH--KEWLAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPR 211
TG VAVK ++ L ++ EV + L HPN+VKL + LV E+
Sbjct: 38 TGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 97
Query: 212 GSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAK 271
G + ++L R K + + H+ K +++RD K N+LLD + N K
Sbjct: 98 GEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQ---KFIVHRDLKAENLLLDADMNIK 153
Query: 272 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTA-KSDVYSFGVVLLEMLTGR 330
++DFG + + G+K G+ YAAPE + DV+S GV+L +++G
Sbjct: 154 IADFGFSNEFTFGNKLDT---FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGS 210
Query: 331 RSMD 334
D
Sbjct: 211 LPFD 214
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 95/228 (41%), Gaps = 46/228 (20%)
Query: 122 SFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYL 181
F+ L+G GGFG V+K ++G V +K + ++ + +E V L
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYV---------IKRVKYNNEKAERE----VKAL 58
Query: 182 GGLIHPNLVKLIGC---------------------CIEDDQRLLVYEFMPRGSLENHL-F 219
L H N+V GC C+ + EF +G+LE +
Sbjct: 59 AKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCL-----FIQMEFCDKGTLEQWIEK 113
Query: 220 RRSLPLPWSIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAK 279
RR L + +++ KG+ ++H K +I RD K SNI L K+ DFGL
Sbjct: 114 RRGEKLDKVLALELFEQITKGVDYIHS---KKLINRDLKPSNIFLVDTKQVKIGDFGLVT 170
Query: 280 DGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEML 327
K R GT Y +PE + + + D+Y+ G++L E+L
Sbjct: 171 SLKNDGK---RXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 116/257 (45%), Gaps = 23/257 (8%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
+G+G G VY + TG VA++ +N + + E+ + +PN
Sbjct: 29 IGQGASGTVYTA---------MDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN 79
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEEA 248
+V + + D+ +V E++ GSL + + + + + + L FLH
Sbjct: 80 IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMD--EGQIAAVCRECLQALEFLHS-- 135
Query: 249 EKPVIYRDFKTSNILLDGEYNAKLSDFGL-AKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
VI+R+ K+ NILL + + KL+DFG A+ PE K + ++GT + APE V
Sbjct: 136 -NQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSTMVGTPYWMAPEVVTR 191
Query: 308 GHLTAKSDVYSFGVVLLEMLTGR-RSMDKNRPNGEHNLVEWARPQLGERRR----FYRLI 362
K D++S G++ +EM+ G +++N + + P+L + F +
Sbjct: 192 KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFL 251
Query: 363 DPCLEGCFSIKGAEKTI 379
+ CLE +G+ K +
Sbjct: 252 NRCLEMDVEKRGSAKEL 268
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 103/227 (45%), Gaps = 30/227 (13%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHP 187
++G GGFG VY K TG A+K L+ ++ + E L I
Sbjct: 196 IIGRGGFGEVY---------GCRKADTGKMYAMKCLDKKRIKMKQ---GETLALNERIML 243
Query: 188 NLVKLIGC----CIE-----DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAA 238
+LV C C+ D+ + + M G L HL + + +R A +
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEII 302
Query: 239 KGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 298
GL +H + V+YRD K +NILLD + ++SD GLA D + K H S +GT+G
Sbjct: 303 LGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK-KPHAS---VGTHG 355
Query: 299 YAAPEYVMTG-HLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNL 344
Y APE + G + +D +S G +L ++L G +++ +H +
Sbjct: 356 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 402
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 103/227 (45%), Gaps = 30/227 (13%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHP 187
++G GGFG VY K TG A+K L+ ++ + E L I
Sbjct: 196 IIGRGGFGEVY---------GCRKADTGKMYAMKCLDKKRIKMKQ---GETLALNERIML 243
Query: 188 NLVKLIGC----CIE-----DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAA 238
+LV C C+ D+ + + M G L HL + + +R A +
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEII 302
Query: 239 KGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 298
GL +H + V+YRD K +NILLD + ++SD GLA D + K H S +GT+G
Sbjct: 303 LGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK-KPHAS---VGTHG 355
Query: 299 YAAPEYVMTG-HLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNL 344
Y APE + G + +D +S G +L ++L G +++ +H +
Sbjct: 356 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 402
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 84/184 (45%), Gaps = 10/184 (5%)
Query: 154 TGLPVAVKTLNHDGLQGH--KEWLAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPR 211
TG VAVK ++ L ++ EV + L HPN+VKL + LV E+
Sbjct: 38 TGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 97
Query: 212 GSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAK 271
G + ++L R K + + H+ K +++RD K N+LLD + N K
Sbjct: 98 GEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQ---KFIVHRDLKAENLLLDADMNIK 153
Query: 272 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTA-KSDVYSFGVVLLEMLTGR 330
++DFG + + G+K G+ YAAPE + DV+S GV+L +++G
Sbjct: 154 IADFGFSNEFTFGNKLDT---FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGS 210
Query: 331 RSMD 334
D
Sbjct: 211 LPFD 214
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 87/190 (45%), Gaps = 12/190 (6%)
Query: 158 VAVKTLNHDGLQGHKEWLA---EVNYLGGLIHPNLVKLIGCCIEDDQR----LLVYEFMP 210
VAVK L D + +L E L HP +V + + +V E++
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVD 99
Query: 211 RGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNA 270
+L + + P+ +++ DA + L F H+ +I+RD K +NI++
Sbjct: 100 GVTLRD-IVHTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAV 155
Query: 271 KLSDFGLAKD-GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
K+ DFG+A+ G+ + V+GT Y +PE + A+SDVYS G VL E+LTG
Sbjct: 156 KVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
Query: 330 RRSMDKNRPN 339
+ P+
Sbjct: 216 EPPFTGDSPD 225
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 84/180 (46%), Gaps = 12/180 (6%)
Query: 158 VAVKTLNHDGLQGHKEWLA---EVNYLGGLIHPNLVKLIGCCIEDDQR----LLVYEFMP 210
VAVK L D + +L E L HP +V + + +V E++
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVD 99
Query: 211 RGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNA 270
+L + + P+ +++ DA + L F H+ +I+RD K +NI++
Sbjct: 100 GVTLRD-IVHTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAV 155
Query: 271 KLSDFGLAKD-GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
K+ DFG+A+ G+ + V+GT Y +PE + A+SDVYS G VL E+LTG
Sbjct: 156 KVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 80/175 (45%), Gaps = 10/175 (5%)
Query: 159 AVKTLNHDGLQGHKE---WLAEVN-YLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSL 214
AVK L + KE ++E N L + HP LV L D+ V +++ G L
Sbjct: 67 AVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGEL 126
Query: 215 ENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSD 274
HL R L R A + A L +LH ++YRD K NILLD + + L+D
Sbjct: 127 FYHLQRERCFLEPRARF-YAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTD 182
Query: 275 FGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
FGL K+ E + T ++ GT Y APE + D + G VL EML G
Sbjct: 183 FGLCKENIEHNST--TSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYG 235
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 87/206 (42%), Gaps = 18/206 (8%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKE---WLAEVNYLGGL 184
LLG+G FG V + TG A+K L + + E + E L
Sbjct: 15 LLGKGTFGKV---------ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 65
Query: 185 IHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFL 244
HP L L D+ V E+ G L HL R + R A + L +L
Sbjct: 66 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGA-EIVSALEYL 124
Query: 245 HEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEY 304
H + V+YRD K N++LD + + K++DFGL K+G T + GT Y APE
Sbjct: 125 HS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--FCGTPEYLAPEV 179
Query: 305 VMTGHLTAKSDVYSFGVVLLEMLTGR 330
+ D + GVV+ EM+ GR
Sbjct: 180 LEDNDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 95/208 (45%), Gaps = 22/208 (10%)
Query: 127 CLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGH--KEWLAEVNYLGGL 184
C+LG+G FG V K + T AVK +N + L EV L L
Sbjct: 28 CMLGKGSFGEVLKCKDRI---------TQQEYAVKVINKASAKNKDTSTILREVELLKKL 78
Query: 185 IHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFL 244
HPN++KL + +V E G L + + +R +I G+ ++
Sbjct: 79 DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYM 137
Query: 245 HEEAEKPVIYRDFKTSNILLDG---EYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAA 301
H+ +++RD K NILL+ + + K+ DFGL+ + T + R+ GT Y A
Sbjct: 138 HKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN--TKMKDRI-GTAYYIA 191
Query: 302 PEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
PE V+ G K DV+S GV+L +L+G
Sbjct: 192 PE-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 84/184 (45%), Gaps = 10/184 (5%)
Query: 154 TGLPVAVKTLNHDGLQGH--KEWLAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPR 211
TG VAVK ++ L ++ EV + L HPN+VKL + LV E+
Sbjct: 31 TGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 90
Query: 212 GSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAK 271
G + ++L R K + + H+ K +++RD K N+LLD + N K
Sbjct: 91 GEVFDYLVAHGWMKEKEARAKFR-QIVSAVQYCHQ---KFIVHRDLKAENLLLDADMNIK 146
Query: 272 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTA-KSDVYSFGVVLLEMLTGR 330
++DFG + + G+K G+ YAAPE + DV+S GV+L +++G
Sbjct: 147 IADFGFSNEFTFGNKLDT---FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGS 203
Query: 331 RSMD 334
D
Sbjct: 204 LPFD 207
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 87/206 (42%), Gaps = 18/206 (8%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKE---WLAEVNYLGGL 184
LLG+G FG V + TG A+K L + + E + E L
Sbjct: 12 LLGKGTFGKV---------ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 62
Query: 185 IHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFL 244
HP L L D+ V E+ G L HL R + R A + L +L
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGA-EIVSALEYL 121
Query: 245 HEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEY 304
H + V+YRD K N++LD + + K++DFGL K+G T + GT Y APE
Sbjct: 122 HS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--FCGTPEYLAPEV 176
Query: 305 VMTGHLTAKSDVYSFGVVLLEMLTGR 330
+ D + GVV+ EM+ GR
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 95/208 (45%), Gaps = 22/208 (10%)
Query: 127 CLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGH--KEWLAEVNYLGGL 184
C+LG+G FG V K + T AVK +N + L EV L L
Sbjct: 28 CMLGKGSFGEVLKCKDRI---------TQQEYAVKVINKASAKNKDTSTILREVELLKKL 78
Query: 185 IHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFL 244
HPN++KL + +V E G L + + +R +I G+ ++
Sbjct: 79 DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYM 137
Query: 245 HEEAEKPVIYRDFKTSNILLDG---EYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAA 301
H+ +++RD K NILL+ + + K+ DFGL+ + T + R+ GT Y A
Sbjct: 138 HKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN--TKMKDRI-GTAYYIA 191
Query: 302 PEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
PE V+ G K DV+S GV+L +L+G
Sbjct: 192 PE-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 84/180 (46%), Gaps = 12/180 (6%)
Query: 158 VAVKTLNHDGLQGHKEWLA---EVNYLGGLIHPNLVKLIGCCIEDDQR----LLVYEFMP 210
VAVK L D + +L E L HP +V + + +V E++
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVD 99
Query: 211 RGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNA 270
+L + + P+ +++ DA + L F H+ +I+RD K +NI++
Sbjct: 100 GVTLRD-IVHTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAV 155
Query: 271 KLSDFGLAKD-GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
K+ DFG+A+ G+ + V+GT Y +PE + A+SDVYS G VL E+LTG
Sbjct: 156 KVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 83/184 (45%), Gaps = 10/184 (5%)
Query: 154 TGLPVAVKTLNHDGLQGH--KEWLAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPR 211
TG VAVK ++ L ++ EV + L HPN+VKL + LV E+
Sbjct: 38 TGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 97
Query: 212 GSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAK 271
G + ++L R K + + H+ K +++RD K N+LLD + N K
Sbjct: 98 GEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQ---KFIVHRDLKAENLLLDADMNIK 153
Query: 272 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTA-KSDVYSFGVVLLEMLTGR 330
++DFG + + G+K G YAAPE + DV+S GV+L +++G
Sbjct: 154 IADFGFSNEFTFGNKLDA---FCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGS 210
Query: 331 RSMD 334
D
Sbjct: 211 LPFD 214
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 87/206 (42%), Gaps = 18/206 (8%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKE---WLAEVNYLGGL 184
LLG+G FG V + TG A+K L + + E + E L
Sbjct: 12 LLGKGTFGKV---------ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 62
Query: 185 IHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFL 244
HP L L D+ V E+ G L HL R + R A + L +L
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGA-EIVSALEYL 121
Query: 245 HEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEY 304
H + V+YRD K N++LD + + K++DFGL K+G T + GT Y APE
Sbjct: 122 HS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--FCGTPEYLAPEV 176
Query: 305 VMTGHLTAKSDVYSFGVVLLEMLTGR 330
+ D + GVV+ EM+ GR
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 84/180 (46%), Gaps = 12/180 (6%)
Query: 158 VAVKTLNHDGLQGHKEWLA---EVNYLGGLIHPNLVKLIGCCIEDDQR----LLVYEFMP 210
VAVK L D + +L E L HP +V + + +V E++
Sbjct: 40 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVD 99
Query: 211 RGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNA 270
+L + + P+ +++ DA + L F H+ +I+RD K +NI++
Sbjct: 100 GVTLRD-IVHTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAV 155
Query: 271 KLSDFGLAKD-GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
K+ DFG+A+ G+ + V+GT Y +PE + A+SDVYS G VL E+LTG
Sbjct: 156 KVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 215
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 129/310 (41%), Gaps = 55/310 (17%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
+GEG G V ATV+ +G VAVK ++ Q + EV + H N
Sbjct: 82 IGEGSTGIV--------CIATVR-SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 132
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK------IALDAAKGLA 242
+V++ + D+ +V EF+ G+L + + RM + L + L+
Sbjct: 133 VVEMYNSYLVGDELWVVMEFLEGGALTD--------IVTHTRMNEEQIAAVCLAVLQALS 184
Query: 243 FLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFG----LAKDGPEGDKTHVSTRVMGTYG 298
LH + VI+RD K+ +ILL + KLSDFG ++K+ P ++GT
Sbjct: 185 VLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR------RKXLVGTPY 235
Query: 299 YAAPEYVMTGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPQLGERRRF 358
+ APE + + D++S G++++EM+ G P ++ R L R +
Sbjct: 236 WMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI---RDNLPPRLKN 292
Query: 359 YRLIDPCLEGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPLPYLKDMASSSSY 418
+ P L+G L RD R +E+++ P+L +S
Sbjct: 293 LHKVSPSLKGFLD------------RLLVRDPAQRATAAELLKH----PFLAKAGPPASI 336
Query: 419 VQAMQAERVR 428
V M+ R R
Sbjct: 337 VPLMRQNRTR 346
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 136/333 (40%), Gaps = 51/333 (15%)
Query: 101 ELKISP-QLRKFSFNELKSATKSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVA 159
+LKISP Q F+ +LK + +G G +G V K V +G +A
Sbjct: 8 KLKISPEQHWDFTAEDLKDLGE-------IGRGAYGSVNK---------MVHKPSGQIMA 51
Query: 160 VKTLNHD-GLQGHKEWLAEVNY-LGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENH 217
VK + + K+ L +++ + P +V+ G + + E M + +
Sbjct: 52 VKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFY 111
Query: 218 LFRRSL---PLPWSIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSD 274
+ S+ +P I KI L K L L E + +I+RD K SNILLD N KL D
Sbjct: 112 KYVYSVLDDVIPEEILGKITLATVKALNHLKENLK--IIHRDIKPSNILLDRSGNIKLCD 169
Query: 275 FGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGH----LTAKSDVYSFGVVLLEMLTGR 330
FG++ G D TR G Y APE + +SDV+S G+ L E+ TGR
Sbjct: 170 FGIS--GQLVDSI-AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGR 226
Query: 331 RSMDKNRPNGEH--NLVEWARPQL--GERRRFYRLIDPCLEGCFSIKGAEKTIQLAASCL 386
K + +V+ PQL E R F + I CL
Sbjct: 227 FPYPKWNSVFDQLTQVVKGDPPQLSNSEEREF----------------SPSFINFVNLCL 270
Query: 387 NRDQKARPRMSEVVEALKPLPYLKDMASSSSYV 419
+D+ RP+ E+++ L Y + + YV
Sbjct: 271 TKDESKRPKYKELLKHPFILMYEERAVEVACYV 303
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 109/247 (44%), Gaps = 30/247 (12%)
Query: 97 KIGE-----ELKISPQLRKFSFNELKSATK--SFRPECLLGEGGFGCVYKGWINMNGTAT 149
KIG+ E K + + KF N + K F +LG+G FG V +
Sbjct: 310 KIGQGTKAPEEKTANTISKFDNNGNRDRMKLTDFNFLMVLGKGSFGKV---------MLS 360
Query: 150 VKPGTGLPVAVKTLNHDGLQGHKE---WLAEVNYLGGLIHPNLVKLIGCCIEDDQRL-LV 205
+ GT AVK L D + + + E L P + + C + RL V
Sbjct: 361 ERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFV 420
Query: 206 YEFMPRGSLENHLFRRS-LPLPWSIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILL 264
E++ G L H+ + P ++ A + A GL FL K +IYRD K N++L
Sbjct: 421 MEYVNGGDLMYHIQQVGRFKEPHAVFY--AAEIAIGLFFLQS---KGIIYRDLKLDNVML 475
Query: 265 DGEYNAKLSDFGLAKDGPEGDKTHVSTRVM-GTYGYAAPEYVMTGHLTAKSDVYSFGVVL 323
D E + K++DFG+ K E V+T+ GT Y APE + D ++FGV+L
Sbjct: 476 DSEGHIKIADFGMCK---ENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLL 532
Query: 324 LEMLTGR 330
EML G+
Sbjct: 533 YEMLAGQ 539
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 97/211 (45%), Gaps = 22/211 (10%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHK---EWLAEVNYLGGLI 185
LG G FG V G + TG VAVK LN ++ + E+ L
Sbjct: 19 LGVGTFGKVKIGEHQL---------TGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFR 69
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLH 245
HP+++KL +V E++ G L +++ + R ++ + + H
Sbjct: 70 HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEAR-RLFQQILSAVDYCH 128
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV 305
V++RD K N+LLD NAK++DFGL+ +G+ S G+ YAAPE V
Sbjct: 129 RHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSC---GSPNYAAPE-V 181
Query: 306 MTGHLTA--KSDVYSFGVVLLEMLTGRRSMD 334
++G L A + D++S GV+L +L G D
Sbjct: 182 ISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 97/236 (41%), Gaps = 49/236 (20%)
Query: 122 SFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYL 181
F+ L+G GGFG V+K ++G V ++ + ++ + +E V L
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYV---------IRRVKYNNEKAERE----VKAL 59
Query: 182 GGLIHPNLVKLIGCC--------IEDDQR---------------------LLVYEFMPRG 212
L H N+V GC DD + EF +G
Sbjct: 60 AKLDHVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKG 119
Query: 213 SLENHL-FRRSLPLPWSIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAK 271
+LE + RR L + +++ KG+ ++H K +I+RD K SNI L K
Sbjct: 120 TLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHS---KKLIHRDLKPSNIFLVDTKQVK 176
Query: 272 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEML 327
+ DFGL K TR GT Y +PE + + + D+Y+ G++L E+L
Sbjct: 177 IGDFGLVTSLKNDGK---RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 84/184 (45%), Gaps = 10/184 (5%)
Query: 154 TGLPVAVKTLNHDGLQGH--KEWLAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPR 211
TG VAV+ ++ L ++ EV + L HPN+VKL + LV E+
Sbjct: 38 TGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 97
Query: 212 GSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAK 271
G + ++L R K + + H+ K +++RD K N+LLD + N K
Sbjct: 98 GEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQ---KFIVHRDLKAENLLLDADMNIK 153
Query: 272 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTA-KSDVYSFGVVLLEMLTGR 330
++DFG + + G+K G+ YAAPE + DV+S GV+L +++G
Sbjct: 154 IADFGFSNEFTFGNKL---DEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGS 210
Query: 331 RSMD 334
D
Sbjct: 211 LPFD 214
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 86/206 (41%), Gaps = 18/206 (8%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEW---LAEVNYLGGL 184
LLG+G FG V + TG A+K L + + E + E L
Sbjct: 12 LLGKGTFGKV---------ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 62
Query: 185 IHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFL 244
HP L L D+ V E+ G L HL R + R A + L +L
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGA-EIVSALEYL 121
Query: 245 HEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEY 304
H + V+YRD K N++LD + + K++DFGL K+G T GT Y APE
Sbjct: 122 HS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXFCGTPEYLAPEV 176
Query: 305 VMTGHLTAKSDVYSFGVVLLEMLTGR 330
+ D + GVV+ EM+ GR
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 84/184 (45%), Gaps = 10/184 (5%)
Query: 154 TGLPVAVKTLNHDGLQGH--KEWLAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPR 211
TG VAV+ ++ L ++ EV + L HPN+VKL + LV E+
Sbjct: 38 TGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 97
Query: 212 GSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAK 271
G + ++L R K + + H+ K +++RD K N+LLD + N K
Sbjct: 98 GEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQ---KFIVHRDLKAENLLLDADMNIK 153
Query: 272 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTA-KSDVYSFGVVLLEMLTGR 330
++DFG + + G+K G+ YAAPE + DV+S GV+L +++G
Sbjct: 154 IADFGFSNEFTFGNKLDT---FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGS 210
Query: 331 RSMD 334
D
Sbjct: 211 LPFD 214
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 82/184 (44%), Gaps = 10/184 (5%)
Query: 154 TGLPVAVKTLNHDGLQGH--KEWLAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPR 211
TG VAVK ++ L ++ EV L HPN+VKL + LV E+
Sbjct: 38 TGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASG 97
Query: 212 GSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAK 271
G + ++L R K + + H+ K +++RD K N+LLD + N K
Sbjct: 98 GEVFDYLVAHGRXKEKEARAKFR-QIVSAVQYCHQ---KFIVHRDLKAENLLLDADXNIK 153
Query: 272 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTA-KSDVYSFGVVLLEMLTGR 330
++DFG + + G+K G YAAPE + DV+S GV+L +++G
Sbjct: 154 IADFGFSNEFTFGNKLDA---FCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGS 210
Query: 331 RSMD 334
D
Sbjct: 211 LPFD 214
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 86/206 (41%), Gaps = 18/206 (8%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKE---WLAEVNYLGGL 184
LLG+G FG V + TG A+K L + + E + E L
Sbjct: 12 LLGKGTFGKV---------ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 62
Query: 185 IHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFL 244
HP L L D+ V E+ G L HL R + R A + L +L
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGA-EIVSALEYL 121
Query: 245 HEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEY 304
H + V+YRD K N++LD + + K++DFGL K+G T GT Y APE
Sbjct: 122 HS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXFCGTPEYLAPEV 176
Query: 305 VMTGHLTAKSDVYSFGVVLLEMLTGR 330
+ D + GVV+ EM+ GR
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 86/206 (41%), Gaps = 18/206 (8%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEW---LAEVNYLGGL 184
LLG+G FG V + TG A+K L + + E + E L
Sbjct: 17 LLGKGTFGKV---------ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 67
Query: 185 IHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFL 244
HP L L D+ V E+ G L HL R + R A + L +L
Sbjct: 68 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGA-EIVSALEYL 126
Query: 245 HEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEY 304
H + V+YRD K N++LD + + K++DFGL K+G T GT Y APE
Sbjct: 127 HS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXFCGTPEYLAPEV 181
Query: 305 VMTGHLTAKSDVYSFGVVLLEMLTGR 330
+ D + GVV+ EM+ GR
Sbjct: 182 LEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 122/281 (43%), Gaps = 39/281 (13%)
Query: 142 INMNGTATVKPGTGLP----VAVKTLNHDGLQ-GHKEWLAEVNYLGGLIHPNLVKLIGCC 196
I TA V+ P VA+K +N + Q E L E+ + HPN+V
Sbjct: 18 IGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSF 77
Query: 197 IEDDQRLLVYEFMPRGSLEN---HLF----RRSLPLPWSIRMKIALDAAKGLAFLHEEAE 249
+ D+ LV + + GS+ + H+ +S L S I + +GL +LH+ +
Sbjct: 78 VVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ 137
Query: 250 KPVIYRDFKTSNILLDGEYNAKLSDFGLA---KDGPEGDKTHVSTRVMGTYGYAAPEYV- 305
I+RD K NILL + + +++DFG++ G + + V +GT + APE +
Sbjct: 138 ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVME 194
Query: 306 -MTGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPQLGERRRFYRLIDP 364
+ G+ K+D++SFG+ +E+ TG K P L P P
Sbjct: 195 QVRGY-DFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDP-------------P 240
Query: 365 CLEGCFSIKGAEKTI-----QLAASCLNRDQKARPRMSEVV 400
LE K K ++ + CL +D + RP +E++
Sbjct: 241 SLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELL 281
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 86/206 (41%), Gaps = 18/206 (8%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKE---WLAEVNYLGGL 184
LLG+G FG V + TG A+K L + + E + E L
Sbjct: 12 LLGKGTFGKV---------ILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 62
Query: 185 IHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFL 244
HP L L D+ V E+ G L HL R + R A + L +L
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGA-EIVSALEYL 121
Query: 245 HEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEY 304
H + V+YRD K N++LD + + K++DFGL K+G T GT Y APE
Sbjct: 122 HS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKXFCGTPEYLAPEV 176
Query: 305 VMTGHLTAKSDVYSFGVVLLEMLTGR 330
+ D + GVV+ EM+ GR
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 122/281 (43%), Gaps = 39/281 (13%)
Query: 142 INMNGTATVKPGTGLP----VAVKTLNHDGLQ-GHKEWLAEVNYLGGLIHPNLVKLIGCC 196
I TA V+ P VA+K +N + Q E L E+ + HPN+V
Sbjct: 23 IGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSF 82
Query: 197 IEDDQRLLVYEFMPRGSLEN---HLF----RRSLPLPWSIRMKIALDAAKGLAFLHEEAE 249
+ D+ LV + + GS+ + H+ +S L S I + +GL +LH+ +
Sbjct: 83 VVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ 142
Query: 250 KPVIYRDFKTSNILLDGEYNAKLSDFGLA---KDGPEGDKTHVSTRVMGTYGYAAPEYV- 305
I+RD K NILL + + +++DFG++ G + + V +GT + APE +
Sbjct: 143 ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVME 199
Query: 306 -MTGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPQLGERRRFYRLIDP 364
+ G+ K+D++SFG+ +E+ TG K P L P P
Sbjct: 200 QVRGY-DFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDP-------------P 245
Query: 365 CLEGCFSIKGAEKTI-----QLAASCLNRDQKARPRMSEVV 400
LE K K ++ + CL +D + RP +E++
Sbjct: 246 SLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELL 286
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 129/310 (41%), Gaps = 55/310 (17%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
+GEG G V ATV+ +G VAVK ++ Q + EV + H N
Sbjct: 37 IGEGSTGIV--------CIATVR-SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 87
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK------IALDAAKGLA 242
+V++ + D+ +V EF+ G+L + + RM + L + L+
Sbjct: 88 VVEMYNSYLVGDELWVVMEFLEGGALTD--------IVTHTRMNEEQIAAVCLAVLQALS 139
Query: 243 FLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFG----LAKDGPEGDKTHVSTRVMGTYG 298
LH + VI+RD K+ +ILL + KLSDFG ++K+ P ++GT
Sbjct: 140 VLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR------RKXLVGTPY 190
Query: 299 YAAPEYVMTGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPQLGERRRF 358
+ APE + + D++S G++++EM+ G P ++ R L R +
Sbjct: 191 WMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI---RDNLPPRLKN 247
Query: 359 YRLIDPCLEGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPLPYLKDMASSSSY 418
+ P L+G L RD R +E+++ P+L +S
Sbjct: 248 LHKVSPSLKGFLD------------RLLVRDPAQRATAAELLKH----PFLAKAGPPASI 291
Query: 419 VQAMQAERVR 428
V M+ R R
Sbjct: 292 VPLMRQNRTR 301
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 129/310 (41%), Gaps = 55/310 (17%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
+GEG G V ATV+ +G VAVK ++ Q + EV + H N
Sbjct: 39 IGEGSTGIV--------CIATVR-SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 89
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK------IALDAAKGLA 242
+V++ + D+ +V EF+ G+L + + RM + L + L+
Sbjct: 90 VVEMYNSYLVGDELWVVMEFLEGGALTD--------IVTHTRMNEEQIAAVCLAVLQALS 141
Query: 243 FLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFG----LAKDGPEGDKTHVSTRVMGTYG 298
LH + VI+RD K+ +ILL + KLSDFG ++K+ P ++GT
Sbjct: 142 VLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR------RKXLVGTPY 192
Query: 299 YAAPEYVMTGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPQLGERRRF 358
+ APE + + D++S G++++EM+ G P ++ R L R +
Sbjct: 193 WMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI---RDNLPPRLKN 249
Query: 359 YRLIDPCLEGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPLPYLKDMASSSSY 418
+ P L+G L RD R +E+++ P+L +S
Sbjct: 250 LHKVSPSLKGFLD------------RLLVRDPAQRATAAELLKH----PFLAKAGPPASI 293
Query: 419 VQAMQAERVR 428
V M+ R R
Sbjct: 294 VPLMRQNRTR 303
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 92/211 (43%), Gaps = 20/211 (9%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQG---HKEWLAEVNYLGGLI 185
LG+G FG VY + + +A+K L L+ + EV L
Sbjct: 17 LGKGKFGNVY---------LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 67
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLH 245
HPN+++L G + + L+ E+ P G++ L + S I + A L++ H
Sbjct: 68 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-ELANALSYCH 126
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV 305
K VI+RD K N+LL K++DFG + P +T +S GT Y PE +
Sbjct: 127 S---KRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLS----GTLDYLPPEMI 179
Query: 306 MTGHLTAKSDVYSFGVVLLEMLTGRRSMDKN 336
K D++S GV+ E L G+ + N
Sbjct: 180 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 210
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 92/215 (42%), Gaps = 14/215 (6%)
Query: 119 ATKSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEV 178
AT + P +G G +G VYK +G +P + +E +A +
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVRE-VALL 65
Query: 179 NYLGGLIHPNLVKLIGCCI--EDDQRL---LVYEFMPRGSLENHLFRRSLP-LPWSIRMK 232
L HPN+V+L+ C D+ + LV+E + + L +L + P LP
Sbjct: 66 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKD 124
Query: 233 IALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTR 292
+ +GL FLH +++RD K NIL+ KL+DFGLA+ T
Sbjct: 125 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI---YSYQMALTP 178
Query: 293 VMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEML 327
V+ T Y APE ++ D++S G + EM
Sbjct: 179 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 213
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 91/211 (43%), Gaps = 20/211 (9%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQG---HKEWLAEVNYLGGLI 185
LG+G FG VY + + +A+K L L+ + EV L
Sbjct: 42 LGKGKFGNVY---------LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 92
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLH 245
HPN+++L G + + L+ E+ P G++ L + S I + A L++ H
Sbjct: 93 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-ELANALSYCH 151
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV 305
K VI+RD K N+LL K++DFG + P + T + GT Y PE +
Sbjct: 152 S---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMI 204
Query: 306 MTGHLTAKSDVYSFGVVLLEMLTGRRSMDKN 336
K D++S GV+ E L G+ + N
Sbjct: 205 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 235
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 90/209 (43%), Gaps = 16/209 (7%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKT-LNHDGLQGHKEWLAEVNYLGGLIHP 187
LG+G FG VY + K L V K L G++ + EV L HP
Sbjct: 21 LGKGKFGNVY-----LAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHP 73
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEE 247
N+++L G + + L+ E+ PRG + L + S I + A L++ H
Sbjct: 74 NILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYIT-ELANALSYCHS- 131
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
K VI+RD K N+LL K++DFG + P + + GT Y PE +
Sbjct: 132 --KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----XXLXGTLDYLPPEMIEG 185
Query: 308 GHLTAKSDVYSFGVVLLEMLTGRRSMDKN 336
K D++S GV+ E L G+ + N
Sbjct: 186 RMHDEKVDLWSLGVLCYEFLVGKPPFEAN 214
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 84/180 (46%), Gaps = 12/180 (6%)
Query: 158 VAVKTLNHDGLQGHKEWLA---EVNYLGGLIHPNLVKLIGCCIEDDQR----LLVYEFMP 210
VAVK L D + +L E L HP +V + + +V E++
Sbjct: 57 VAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVD 116
Query: 211 RGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNA 270
+L + + P+ +++ DA + L F H+ +I+RD K +NI++
Sbjct: 117 GVTLRD-IVHTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAV 172
Query: 271 KLSDFGLAKD-GPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
K+ DFG+A+ G+ + V+GT Y +PE + A+SDVYS G VL E+LTG
Sbjct: 173 KVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG 232
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 91/209 (43%), Gaps = 16/209 (7%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKT-LNHDGLQGHKEWLAEVNYLGGLIHP 187
LG+G FG VY + K L V K L G++ + EV L HP
Sbjct: 16 LGKGKFGNVY-----LAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHP 68
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEE 247
N+++L G + + L+ E+ P G++ L + S I + A L++ H
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-ELANALSYCHS- 126
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
K VI+RD K N+LL K++DFG + P +T + GT Y PE +
Sbjct: 127 --KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTELC----GTLDYLPPEMIEG 180
Query: 308 GHLTAKSDVYSFGVVLLEMLTGRRSMDKN 336
K D++S GV+ E L G+ + N
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 102/223 (45%), Gaps = 19/223 (8%)
Query: 142 INMNGTATVKPG----TGLPVAVKTLNHDGLQGHKEWL-AEVNYLGGLIHPNLVKLIGCC 196
I G A VK TG VA+K ++ + L + E+ L L H ++ +L
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVL 77
Query: 197 IEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEEAEKPVIYRD 256
++ +V E+ P G L +++ + R+ + +A++H + +RD
Sbjct: 78 ETANKIFMVLEYCPGGELFDYIISQDRLSEEETRV-VFRQIVSAVAYVHSQG---YAHRD 133
Query: 257 FKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-TGHLTAKSD 315
K N+L D + KL DFGL P+G+K + G+ YAAPE + +L +++D
Sbjct: 134 LKPENLLFDEYHKLKLIDFGLCA-KPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEAD 192
Query: 316 VYSFGVVLLEMLTGRRSMD--------KNRPNGEHNLVEWARP 350
V+S G++L ++ G D K G++++ +W P
Sbjct: 193 VWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPKWLSP 235
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 91/211 (43%), Gaps = 20/211 (9%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQG---HKEWLAEVNYLGGLI 185
LG+G FG VY + + +A+K L L+ + EV L
Sbjct: 33 LGKGKFGNVY---------LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 83
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLH 245
HPN+++L G + + L+ E+ P G++ L + S I + A L++ H
Sbjct: 84 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-ELANALSYCH 142
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV 305
K VI+RD K N+LL K++DFG + P + T + GT Y PE +
Sbjct: 143 S---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMI 195
Query: 306 MTGHLTAKSDVYSFGVVLLEMLTGRRSMDKN 336
K D++S GV+ E L G+ + N
Sbjct: 196 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 226
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 129/310 (41%), Gaps = 55/310 (17%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
+GEG G V ATV+ +G VAVK ++ Q + EV + H N
Sbjct: 28 IGEGSTGIV--------CIATVR-SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 78
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK------IALDAAKGLA 242
+V++ + D+ +V EF+ G+L + + RM + L + L+
Sbjct: 79 VVEMYNSYLVGDELWVVMEFLEGGALTD--------IVTHTRMNEEQIAAVCLAVLQALS 130
Query: 243 FLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFG----LAKDGPEGDKTHVSTRVMGTYG 298
LH + VI+RD K+ +ILL + KLSDFG ++K+ P ++GT
Sbjct: 131 VLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR------RKXLVGTPY 181
Query: 299 YAAPEYVMTGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPQLGERRRF 358
+ APE + + D++S G++++EM+ G P ++ R L R +
Sbjct: 182 WMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI---RDNLPPRLKN 238
Query: 359 YRLIDPCLEGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPLPYLKDMASSSSY 418
+ P L+G L RD R +E+++ P+L +S
Sbjct: 239 LHKVSPSLKGFLD------------RLLVRDPAQRATAAELLKH----PFLAKAGPPASI 282
Query: 419 VQAMQAERVR 428
V M+ R R
Sbjct: 283 VPLMRQNRTR 292
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 91/209 (43%), Gaps = 16/209 (7%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKT-LNHDGLQGHKEWLAEVNYLGGLIHP 187
LG+G FG VY + K L V K L G++ + EV L HP
Sbjct: 21 LGKGKFGNVY-----LAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHP 73
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEE 247
N+++L G + + L+ E+ P G++ L + S I + A L++ H
Sbjct: 74 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-ELANALSYCHS- 131
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
K VI+RD K N+LL K++DFG + P + T + GT Y PE +
Sbjct: 132 --KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEXIEG 185
Query: 308 GHLTAKSDVYSFGVVLLEMLTGRRSMDKN 336
K D++S GV+ E L G+ + N
Sbjct: 186 RXHDEKVDLWSLGVLCYEFLVGKPPFEAN 214
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 130/304 (42%), Gaps = 42/304 (13%)
Query: 108 LRKFSFNELKSATKSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDG 167
L + + L+ F L+G G +G VYKG VK TG A+K ++ G
Sbjct: 11 LDEIDLSALRDPAGIFELVELVGNGTYGQVYKG-------RHVK--TGQLAAIKVMDVTG 61
Query: 168 LQGHKEWLAEVNYLGGLIHP-NLVKLIGCCIE------DDQRLLVYEFMPRGSLENHLFR 220
+ +E E+N L H N+ G I+ DDQ LV EF GS+ + +
Sbjct: 62 DE-EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKN 120
Query: 221 ---RSLPLPWSIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGL 277
+L W I + +GL+ LH+ VI+RD K N+LL KL DFG+
Sbjct: 121 TKGNTLKEEWI--AYICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLVDFGV 175
Query: 278 AKDGPEGDKTHVSTR--VMGTYGYAAPEYVMTGH-----LTAKSDVYSFGVVLLEMLTGR 330
+ + D+T V R +GT + APE + KSD++S G+ +EM G
Sbjct: 176 S---AQLDRT-VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGA 231
Query: 331 RSMDKNRPNGEHNLV-EWARPQLGER---RRFYRLIDPCLEGCFSIKGAEKTIQLAASCL 386
+ P L+ P+L + ++F I+ CL S + A T QL
Sbjct: 232 PPLCDMHPMRALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPA--TEQLMKHPF 289
Query: 387 NRDQ 390
RDQ
Sbjct: 290 IRDQ 293
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 129/310 (41%), Gaps = 55/310 (17%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
+GEG G V ATV+ +G VAVK ++ Q + EV + H N
Sbjct: 32 IGEGSTGIV--------CIATVR-SSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHEN 82
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK------IALDAAKGLA 242
+V++ + D+ +V EF+ G+L + + RM + L + L+
Sbjct: 83 VVEMYNSYLVGDELWVVMEFLEGGALTD--------IVTHTRMNEEQIAAVCLAVLQALS 134
Query: 243 FLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFG----LAKDGPEGDKTHVSTRVMGTYG 298
LH + VI+RD K+ +ILL + KLSDFG ++K+ P ++GT
Sbjct: 135 VLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR------RKXLVGTPY 185
Query: 299 YAAPEYVMTGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPQLGERRRF 358
+ APE + + D++S G++++EM+ G P ++ R L R +
Sbjct: 186 WMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI---RDNLPPRLKN 242
Query: 359 YRLIDPCLEGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPLPYLKDMASSSSY 418
+ P L+G L RD R +E+++ P+L +S
Sbjct: 243 LHKVSPSLKGFLD------------RLLVRDPAQRATAAELLKH----PFLAKAGPPASI 286
Query: 419 VQAMQAERVR 428
V M+ R R
Sbjct: 287 VPLMRQNRTR 296
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 84/204 (41%), Gaps = 10/204 (4%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHP 187
+LG GGFG V+ + G K + G K+ LA+V H
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-------HS 244
Query: 188 NLVKLIGCCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHE 246
+ + E L LV M G + H++ P + A+ ++ L
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 247 EAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM 306
++ +IYRD K N+LLD + N ++SD GLA + G + GT G+ APE ++
Sbjct: 305 LHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFMAPELLL 362
Query: 307 TGHLTAKSDVYSFGVVLLEMLTGR 330
D ++ GV L EM+ R
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 91/209 (43%), Gaps = 16/209 (7%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKT-LNHDGLQGHKEWLAEVNYLGGLIHP 187
LG+G FG VY + K L V K L G++ + EV L HP
Sbjct: 17 LGKGKFGNVY-----LAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHP 69
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEE 247
N+++L G + + L+ E+ P G++ L + S I + A L++ H
Sbjct: 70 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-ELANALSYCHS- 127
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
K VI+RD K N+LL K++DFG + P +T + GT Y PE +
Sbjct: 128 --KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GTLDYLPPEMIEG 181
Query: 308 GHLTAKSDVYSFGVVLLEMLTGRRSMDKN 336
K D++S GV+ E L G+ + N
Sbjct: 182 RMHDEKVDLWSLGVLCYEFLVGKPPFEAN 210
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 84/204 (41%), Gaps = 10/204 (4%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHP 187
+LG GGFG V+ + G K + G K+ LA+V H
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-------HS 244
Query: 188 NLVKLIGCCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHE 246
+ + E L LV M G + H++ P + A+ ++ L
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 247 EAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM 306
++ +IYRD K N+LLD + N ++SD GLA + G + GT G+ APE ++
Sbjct: 305 LHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFMAPELLL 362
Query: 307 TGHLTAKSDVYSFGVVLLEMLTGR 330
D ++ GV L EM+ R
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 91/209 (43%), Gaps = 16/209 (7%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKT-LNHDGLQGHKEWLAEVNYLGGLIHP 187
LG+G FG VY + K L V K L G++ + EV L HP
Sbjct: 21 LGKGKFGNVY-----LAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHP 73
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEE 247
N+++L G + + L+ E+ P G++ L + S I + A L++ H
Sbjct: 74 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-ELANALSYCHS- 131
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
K VI+RD K N+LL K++DFG + P +T + GT Y PE +
Sbjct: 132 --KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GTLDYLPPEMIEG 185
Query: 308 GHLTAKSDVYSFGVVLLEMLTGRRSMDKN 336
K D++S GV+ E L G+ + N
Sbjct: 186 RMHDEKVDLWSLGVLCYEFLVGKPPFEAN 214
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 84/204 (41%), Gaps = 10/204 (4%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHP 187
+LG GGFG V+ + G K + G K+ LA+V H
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-------HS 244
Query: 188 NLVKLIGCCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHE 246
+ + E L LV M G + H++ P + A+ ++ L
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 247 EAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM 306
++ +IYRD K N+LLD + N ++SD GLA + G + GT G+ APE ++
Sbjct: 305 LHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFMAPELLL 362
Query: 307 TGHLTAKSDVYSFGVVLLEMLTGR 330
D ++ GV L EM+ R
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 83/184 (45%), Gaps = 10/184 (5%)
Query: 154 TGLPVAVKTLNHDGLQ--GHKEWLAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPR 211
TG VA+K ++ L ++ EV + L HPN+VKL + L+ E+
Sbjct: 36 TGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASG 95
Query: 212 GSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAK 271
G + ++L R K + + H+ K +++RD K N+LLD + N K
Sbjct: 96 GEVFDYLVAHGRMKEKEARSKFR-QIVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIK 151
Query: 272 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTA-KSDVYSFGVVLLEMLTGR 330
++DFG + + G K G+ YAAPE + DV+S GV+L +++G
Sbjct: 152 IADFGFSNEFTVGGKLDT---FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGS 208
Query: 331 RSMD 334
D
Sbjct: 209 LPFD 212
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 95/209 (45%), Gaps = 23/209 (11%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKE---WLAEVNYLGGL 184
+LG+G FG V + + GT AVK L D + + + E L
Sbjct: 27 VLGKGSFGKV---------MLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALP 77
Query: 185 IHPNLVKLIGCCIEDDQRL-LVYEFMPRGSLENHLFRRS-LPLPWSIRMKIALDAAKGLA 242
P + + C + RL V E++ G L H+ + P ++ A + A GL
Sbjct: 78 GKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFY--AAEIAIGLF 135
Query: 243 FLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVM-GTYGYAA 301
FL K +IYRD K N++LD E + K++DFG+ K E V+T+ GT Y A
Sbjct: 136 FLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCK---ENIWDGVTTKXFCGTPDYIA 189
Query: 302 PEYVMTGHLTAKSDVYSFGVVLLEMLTGR 330
PE + D ++FGV+L EML G+
Sbjct: 190 PEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 218
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 84/204 (41%), Gaps = 10/204 (4%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHP 187
+LG GGFG V+ + G K + G K+ LA+V H
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-------HS 244
Query: 188 NLVKLIGCCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHE 246
+ + E L LV M G + H++ P + A+ ++ L
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 247 EAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM 306
++ +IYRD K N+LLD + N ++SD GLA + G + GT G+ APE ++
Sbjct: 305 LHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK--TKGYAGTPGFMAPELLL 362
Query: 307 TGHLTAKSDVYSFGVVLLEMLTGR 330
D ++ GV L EM+ R
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 91/209 (43%), Gaps = 16/209 (7%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKT-LNHDGLQGHKEWLAEVNYLGGLIHP 187
LG+G FG VY + K L V K L G++ + EV L HP
Sbjct: 21 LGKGKFGNVY-----LAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHP 73
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEE 247
N+++L G + + L+ E+ P G++ L + S I + A L++ H
Sbjct: 74 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-ELANALSYCHS- 131
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
K VI+RD K N+LL K++DFG + P + T + GT Y PE +
Sbjct: 132 --KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEG 185
Query: 308 GHLTAKSDVYSFGVVLLEMLTGRRSMDKN 336
K D++S GV+ E L G+ + N
Sbjct: 186 RMHDEKVDLWSLGVLCYEFLVGKPPFEAN 214
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 91/209 (43%), Gaps = 16/209 (7%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKT-LNHDGLQGHKEWLAEVNYLGGLIHP 187
LG+G FG VY + K L V K L G++ + EV L HP
Sbjct: 16 LGKGKFGNVY-----LAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHP 68
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEE 247
N+++L G + + L+ E+ P G++ L + S I + A L++ H
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-ELANALSYCHS- 126
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
K VI+RD K N+LL K++DFG + P + T + GT Y PE +
Sbjct: 127 --KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEG 180
Query: 308 GHLTAKSDVYSFGVVLLEMLTGRRSMDKN 336
K D++S GV+ E L G+ + N
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 91/209 (43%), Gaps = 16/209 (7%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKT-LNHDGLQGHKEWLAEVNYLGGLIHP 187
LG+G FG VY + K L V K L G++ + EV L HP
Sbjct: 16 LGKGKFGNVY-----LAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHP 68
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEE 247
N+++L G + + L+ E+ P G++ L + S I + A L++ H
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-ELANALSYCHS- 126
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
K VI+RD K N+LL K++DFG + P +T + GT Y PE +
Sbjct: 127 --KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GTLDYLPPEMIEG 180
Query: 308 GHLTAKSDVYSFGVVLLEMLTGRRSMDKN 336
K D++S GV+ E L G+ + N
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 91/211 (43%), Gaps = 20/211 (9%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQG---HKEWLAEVNYLGGLI 185
LG+G FG VY + + +A+K L L+ + EV L
Sbjct: 19 LGKGKFGNVY---------LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 69
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLH 245
HPN+++L G + + L+ E+ P G++ L + S I + A L++ H
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-ELANALSYCH 128
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV 305
K VI+RD K N+LL K++DFG + P + T + GT Y PE +
Sbjct: 129 S---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMI 181
Query: 306 MTGHLTAKSDVYSFGVVLLEMLTGRRSMDKN 336
K D++S GV+ E L G+ + N
Sbjct: 182 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 91/211 (43%), Gaps = 20/211 (9%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQG---HKEWLAEVNYLGGLI 185
LG+G FG VY + + +A+K L L+ + EV L
Sbjct: 16 LGKGKFGNVY---------LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLH 245
HPN+++L G + + L+ E+ P G++ L + S I + A L++ H
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-ELANALSYCH 125
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV 305
K VI+RD K N+LL K++DFG + P +T + GT Y PE +
Sbjct: 126 S---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GTLDYLPPEMI 178
Query: 306 MTGHLTAKSDVYSFGVVLLEMLTGRRSMDKN 336
K D++S GV+ E L G+ + N
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 98/211 (46%), Gaps = 36/211 (17%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
+GEG G V AT K TG VAVK ++ Q + EV + H N
Sbjct: 53 IGEGSTGIV--------CIATEK-HTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDN 103
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK------IALDAAKGLA 242
+V + + D+ +V EF+ G+L + + RM + L + L+
Sbjct: 104 VVDMYSSYLVGDELWVVMEFLEGGALTD--------IVTHTRMNEEQIATVCLSVLRALS 155
Query: 243 FLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFG----LAKDGPEGDKTHVSTRVMGTYG 298
+LH + VI+RD K+ +ILL + KLSDFG ++K+ P+ ++GT
Sbjct: 156 YLHNQG---VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPK------RKXLVGTPY 206
Query: 299 YAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
+ APE + + D++S G++++EM+ G
Sbjct: 207 WMAPEVISRLPYGTEVDIWSLGIMVIEMIDG 237
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 82/184 (44%), Gaps = 10/184 (5%)
Query: 154 TGLPVAVKTLNHDGLQ--GHKEWLAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPR 211
TG VA+K ++ L ++ EV + L HPN+VKL + L+ E+
Sbjct: 39 TGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASG 98
Query: 212 GSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAK 271
G + ++L R K + + H+ K +++RD K N+LLD + N K
Sbjct: 99 GEVFDYLVAHGRMKEKEARSKFR-QIVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIK 154
Query: 272 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTA-KSDVYSFGVVLLEMLTGR 330
++DFG + + G K G YAAPE + DV+S GV+L +++G
Sbjct: 155 IADFGFSNEFTVGGKLDA---FCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGS 211
Query: 331 RSMD 334
D
Sbjct: 212 LPFD 215
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 91/209 (43%), Gaps = 16/209 (7%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKT-LNHDGLQGHKEWLAEVNYLGGLIHP 187
LG+G FG VY + K L V K L G++ + EV L HP
Sbjct: 16 LGKGKFGNVY-----LAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHP 68
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEE 247
N+++L G + + L+ E+ P G++ L + S I + A L++ H
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-ELANALSYCHS- 126
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
K VI+RD K N+LL K++DFG + P +T + GT Y PE +
Sbjct: 127 --KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLC----GTLDYLPPEMIEG 180
Query: 308 GHLTAKSDVYSFGVVLLEMLTGRRSMDKN 336
K D++S GV+ E L G+ + N
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 112/256 (43%), Gaps = 29/256 (11%)
Query: 154 TGLPVAVKTLNHDG-LQGHKEWLAEVNY-LGGLIHPNLVKLIGCCIEDDQRLLVYEFMPR 211
TG +AVK + G + +K L +++ L P +V+ G I + + E M
Sbjct: 49 TGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM-- 106
Query: 212 GSLENHLFRRSL-PLPWSIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNA 270
G+ L +R P+P I K+ + K L +L E+ VI+RD K SNILLD
Sbjct: 107 GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEK--HGVIHRDVKPSNILLDERGQI 164
Query: 271 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV-----MTGHLTAKSDVYSFGVVLLE 325
KL DFG++ G D R G Y APE + ++DV+S G+ L+E
Sbjct: 165 KLCDFGIS--GRLVD-DKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVE 221
Query: 326 MLTGRRSMDKNRPNGEHNLVEWARPQLGERRRFYRLIDPCLEGCFSIKGAEKTIQLAASC 385
+ TG+ KN L + + + P L G G ++ C
Sbjct: 222 LATGQFPY-KNCKTDFEVLTKVLQEE-----------PPLLPGHMGFSGDFQS--FVKDC 267
Query: 386 LNRDQKARPRMSEVVE 401
L +D + RP+ ++++E
Sbjct: 268 LTKDHRKRPKYNKLLE 283
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 98/230 (42%), Gaps = 35/230 (15%)
Query: 122 SFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYL 181
F P LG GGFG V++ ++ LP + ++ + EV L
Sbjct: 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLP--------NRELAREKVMREVKAL 57
Query: 182 GGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSL--ENHLFRRSLPLPW------------ 227
L HP +V+ +E + + P+ L + L R+ W
Sbjct: 58 AKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERER 117
Query: 228 SIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGL--AKDGPEGD 285
S+ + I L A+ + FLH K +++RD K SNI + K+ DFGL A D E +
Sbjct: 118 SVCLHIFLQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEE 174
Query: 286 KTHVS--------TRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEML 327
+T ++ T +GT Y +PE + + K D++S G++L E+L
Sbjct: 175 QTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 89/202 (44%), Gaps = 16/202 (7%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKT-LNHDGLQGHKEWLAEVNYLGGLIHP 187
LG+G FG VY + K L V KT L G++ + EV L HP
Sbjct: 20 LGKGKFGNVY-----LARERQSKFILALKVLFKTQLEKAGVE--HQLRREVEIQSHLRHP 72
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEE 247
N+++L G + + L+ E+ P G++ L + S I + A L++ H
Sbjct: 73 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYIT-ELANALSYCHS- 130
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
K VI+RD K N+LL K++DFG + P + T + GT Y PE +
Sbjct: 131 --KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEG 184
Query: 308 GHLTAKSDVYSFGVVLLEMLTG 329
K D++S GV+ E L G
Sbjct: 185 RMHDEKVDLWSLGVLCYEFLVG 206
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 91/209 (43%), Gaps = 16/209 (7%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKT-LNHDGLQGHKEWLAEVNYLGGLIHP 187
LG+G FG VY + K L V K L G++ + EV L HP
Sbjct: 15 LGKGKFGNVY-----LAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHP 67
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEE 247
N+++L G + + L+ E+ P G++ L + S I + A L++ H
Sbjct: 68 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-ELANALSYCHS- 125
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
K VI+RD K N+LL K++DFG + P +T + GT Y PE +
Sbjct: 126 --KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GTLDYLPPEMIEG 179
Query: 308 GHLTAKSDVYSFGVVLLEMLTGRRSMDKN 336
K D++S GV+ E L G+ + N
Sbjct: 180 RMHDEKVDLWSLGVLCYEFLVGKPPFEAN 208
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 89/206 (43%), Gaps = 20/206 (9%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTL--NHDGLQGHKEWLAEVNYLGGLI 185
L+GEG +G V K TG VA+K + D K + E+ L L
Sbjct: 32 LVGEGSYGMVMK---------CRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLR 82
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLEN-HLFRRSLPLPWSIRMKIALDAAKGLAFL 244
H NLV L+ C + + LV+EF+ L++ LF L + + K G+ F
Sbjct: 83 HENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLD--YQVVQKYLFQIINGIGFC 140
Query: 245 HEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEY 304
H +I+RD K NIL+ KL DFG A+ V + T Y APE
Sbjct: 141 HSHN---IIHRDIKPENILVSQSGVVKLCDFGFAR--TLAAPGEVYDDEVATRWYRAPEL 195
Query: 305 VMTGHLTAKS-DVYSFGVVLLEMLTG 329
++ K+ DV++ G ++ EM G
Sbjct: 196 LVGDVKYGKAVDVWAIGCLVTEMFMG 221
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 90/208 (43%), Gaps = 23/208 (11%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWL-AEVNYLGGLIHP 187
LG G FG V+ + +GL +KT+N D Q E + AE+ L L HP
Sbjct: 30 LGSGAFGDVH---------LVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHP 80
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKIALDAAKGLAFL 244
N++K+ + +V E G L + R L ++ LA+
Sbjct: 81 NIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYF 140
Query: 245 HEEAEKPVIYRDFKTSNILLDG---EYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAA 301
H + V+++D K NIL K+ DFGLA+ + ST GT Y A
Sbjct: 141 HSQH---VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEH---STNAAGTALYMA 194
Query: 302 PEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
PE V +T K D++S GVV+ +LTG
Sbjct: 195 PE-VFKRDVTFKCDIWSAGVVMYFLLTG 221
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 96/220 (43%), Gaps = 27/220 (12%)
Query: 119 ATKSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLN----HDGLQ-GHKE 173
AT + P +G G +G VYK P +G VA+K++ +GL
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKAR---------DPHSGHFVALKSVRVPNGEEGLPISTVR 52
Query: 174 WLAEVNYLGGLIHPNLVKLIGCCI--EDDQRL---LVYEFMPRGSLENHLFRRSLP-LPW 227
+A + L HPN+V+L+ C D+ + LV+E + + L +L + P LP
Sbjct: 53 EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPA 111
Query: 228 SIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKT 287
+ +GL FLH +++RD K NIL+ KL+DFGLA+
Sbjct: 112 ETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI---YSYQ 165
Query: 288 HVSTRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEML 327
V+ T Y APE ++ D++S G + EM
Sbjct: 166 MALAPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 96/205 (46%), Gaps = 19/205 (9%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHP 187
+LG G FG V+K + TGL +A K + G++ +E E++ + L H
Sbjct: 96 ILGGGRFGQVHK---------CEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHA 146
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEE 247
NL++L + +LV E++ G L + + S L + +G+ +H
Sbjct: 147 NLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMH-- 204
Query: 248 AEKPVIYRDFKTSNILL---DGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEY 304
+ +++ D K NIL D + K+ DFGLA+ +K V+ GT + APE
Sbjct: 205 -QMYILHLDLKPENILCVNRDAK-QIKIIDFGLARRYKPREKLKVN---FGTPEFLAPEV 259
Query: 305 VMTGHLTAKSDVYSFGVVLLEMLTG 329
V ++ +D++S GV+ +L+G
Sbjct: 260 VNYDFVSFPTDMWSVGVIAYMLLSG 284
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 91/209 (43%), Gaps = 16/209 (7%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKT-LNHDGLQGHKEWLAEVNYLGGLIHP 187
LG+G FG VY + K L V K L G++ + EV L HP
Sbjct: 20 LGKGKFGNVY-----LAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHP 72
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEE 247
N+++L G + + L+ E+ P G++ L + S I + A L++ H
Sbjct: 73 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-ELANALSYCHS- 130
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
K VI+RD K N+LL K++DFG + P +T + GT Y PE +
Sbjct: 131 --KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GTLDYLPPEMIEG 184
Query: 308 GHLTAKSDVYSFGVVLLEMLTGRRSMDKN 336
K D++S GV+ E L G+ + N
Sbjct: 185 RMHDEKVDLWSLGVLCYEFLVGKPPFEAN 213
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 91/209 (43%), Gaps = 16/209 (7%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKT-LNHDGLQGHKEWLAEVNYLGGLIHP 187
LG+G FG VY + K L V K L G++ + EV L HP
Sbjct: 19 LGKGKFGNVY-----LAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHP 71
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEE 247
N+++L G + + L+ E+ P G++ L + S I + A L++ H
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-ELANALSYCHS- 129
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
K VI+RD K N+LL K++DFG + P +T + GT Y PE +
Sbjct: 130 --KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GTLDYLPPEMIEG 183
Query: 308 GHLTAKSDVYSFGVVLLEMLTGRRSMDKN 336
K D++S GV+ E L G+ + N
Sbjct: 184 RMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 101/212 (47%), Gaps = 30/212 (14%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLA-EVNYLGGLIH 186
LG+GGF Y+ I T V G +P ++ H KE ++ E+ L +
Sbjct: 49 FLGKGGFAKCYE--ITDMDTKEVFAGKVVPKSMLLKPH-----QKEKMSTEIAIHKSLDN 101
Query: 187 PNLVKLIGCCIEDDQRLLVYEFMPRGSL-ENHLFRRSLPLP---WSIRMKIALDAAKGLA 242
P++V G +DD +V E R SL E H R+++ P + +R I +G+
Sbjct: 102 PHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGVQ 156
Query: 243 FLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAK----DGPEGDKTHVSTRVMGTYG 298
+LH VI+RD K N+ L+ + + K+ DFGLA DG E KT + GT
Sbjct: 157 YLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDG-ERKKT-----LCGTPN 207
Query: 299 YAAPEYVMTGHLTAKSDVYSFGVVLLEMLTGR 330
Y APE + + + D++S G +L +L G+
Sbjct: 208 YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 95/215 (44%), Gaps = 28/215 (13%)
Query: 126 ECL--LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLN-HDGLQGHK----EWLAEV 178
EC+ +GEG +G V+K NG G VA+K + G +G +A +
Sbjct: 14 ECVAEIGEGAYGKVFKARDLKNG--------GRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 179 NYLGGLIHPNLVKLIGCCI-----EDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMK 232
+L HPN+V+L C + + LV+E + + L +L + P +P
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKD 124
Query: 233 IALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTR 292
+ +GL FLH V++RD K NIL+ KL+DFGLA+ T
Sbjct: 125 MMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLAR---IYSFQMALTS 178
Query: 293 VMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEML 327
V+ T Y APE ++ D++S G + EM
Sbjct: 179 VVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 90/211 (42%), Gaps = 20/211 (9%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQG---HKEWLAEVNYLGGLI 185
LG+G FG VY + + +A+K L L+ + EV L
Sbjct: 42 LGKGKFGNVY---------LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 92
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLH 245
HPN+++L G + + L+ E+ P G++ L + S I + A L++ H
Sbjct: 93 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-ELANALSYCH 151
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV 305
K VI+RD K N+LL K++DFG + P + + GT Y PE +
Sbjct: 152 S---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC----GTLDYLPPEMI 204
Query: 306 MTGHLTAKSDVYSFGVVLLEMLTGRRSMDKN 336
K D++S GV+ E L G+ + N
Sbjct: 205 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 235
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 101/209 (48%), Gaps = 24/209 (11%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLA-EVNYLGGLIH 186
LG+GGF Y+ I T V G +P ++ H KE ++ E+ L +
Sbjct: 49 FLGKGGFAKCYE--ITDMDTKEVFAGKVVPKSMLLKPH-----QKEKMSTEIAIHKSLDN 101
Query: 187 PNLVKLIGCCIEDDQRLLVYEFMPRGSL-ENHLFRRSLPLP---WSIRMKIALDAAKGLA 242
P++V G +DD +V E R SL E H R+++ P + +R I +G+
Sbjct: 102 PHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGVQ 156
Query: 243 FLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLA-KDGPEGDKTHVSTRVMGTYGYAA 301
+LH VI+RD K N+ L+ + + K+ DFGLA K +G++ + GT Y A
Sbjct: 157 YLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---KKXLCGTPNYIA 210
Query: 302 PEYVMTGHLTAKSDVYSFGVVLLEMLTGR 330
PE + + + D++S G +L +L G+
Sbjct: 211 PEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 76/159 (47%), Gaps = 9/159 (5%)
Query: 175 LAEVNYLGGLIHPNLVKLIGCCIEDDQRLL--VYEFMPRGSLENHLF-----RRSLPLPW 227
++EVN L L HPN+V+ I+ L V E+ G L + + R+ L +
Sbjct: 53 VSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEF 112
Query: 228 SIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKT 287
+R+ L A + V++RD K +N+ LDG+ N KL DFGLA+ T
Sbjct: 113 VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR--ILNHDT 170
Query: 288 HVSTRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEM 326
+ +GT Y +PE + KSD++S G +L E+
Sbjct: 171 SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 96/220 (43%), Gaps = 27/220 (12%)
Query: 119 ATKSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLN----HDGLQ-GHKE 173
AT + P +G G +G VYK P +G VA+K++ +GL
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKAR---------DPHSGHFVALKSVRVPNGEEGLPISTVR 52
Query: 174 WLAEVNYLGGLIHPNLVKLIGCCI--EDDQRL---LVYEFMPRGSLENHLFRRSLP-LPW 227
+A + L HPN+V+L+ C D+ + LV+E + + L +L + P LP
Sbjct: 53 EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPA 111
Query: 228 SIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKT 287
+ +GL FLH +++RD K NIL+ KL+DFGLA+
Sbjct: 112 ETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI---YSYQ 165
Query: 288 HVSTRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEML 327
V+ T Y APE ++ D++S G + EM
Sbjct: 166 MALDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 101/209 (48%), Gaps = 24/209 (11%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLA-EVNYLGGLIH 186
LG+GGF Y+ I T V G +P ++ H KE ++ E+ L +
Sbjct: 49 FLGKGGFAKCYE--ITDMDTKEVFAGKVVPKSMLLKPH-----QKEKMSTEIAIHKSLDN 101
Query: 187 PNLVKLIGCCIEDDQRLLVYEFMPRGSL-ENHLFRRSLPLP---WSIRMKIALDAAKGLA 242
P++V G +DD +V E R SL E H R+++ P + +R I +G+
Sbjct: 102 PHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGVQ 156
Query: 243 FLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLA-KDGPEGDKTHVSTRVMGTYGYAA 301
+LH VI+RD K N+ L+ + + K+ DFGLA K +G++ + GT Y A
Sbjct: 157 YLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---KKDLCGTPNYIA 210
Query: 302 PEYVMTGHLTAKSDVYSFGVVLLEMLTGR 330
PE + + + D++S G +L +L G+
Sbjct: 211 PEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 76/159 (47%), Gaps = 9/159 (5%)
Query: 175 LAEVNYLGGLIHPNLVKLIGCCIEDDQRLL--VYEFMPRGSLENHLF-----RRSLPLPW 227
++EVN L L HPN+V+ I+ L V E+ G L + + R+ L +
Sbjct: 53 VSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEF 112
Query: 228 SIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKT 287
+R+ L A + V++RD K +N+ LDG+ N KL DFGLA+ T
Sbjct: 113 VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR--ILNHDT 170
Query: 288 HVSTRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEM 326
+ +GT Y +PE + KSD++S G +L E+
Sbjct: 171 SFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 90/211 (42%), Gaps = 20/211 (9%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQG---HKEWLAEVNYLGGLI 185
LG+G FG VY + + +A+K L L+ + EV L
Sbjct: 16 LGKGKFGNVY---------LAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLH 245
HPN+++L G + + L+ E+ P G++ L + S I + A L++ H
Sbjct: 67 HPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-ELANALSYCH 125
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV 305
K VI+RD K N+LL K++DFG + P + + GT Y PE +
Sbjct: 126 S---KKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC----GTLDYLPPEMI 178
Query: 306 MTGHLTAKSDVYSFGVVLLEMLTGRRSMDKN 336
K D++S GV+ E L G+ + N
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 95/207 (45%), Gaps = 17/207 (8%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGH-KEWLAEVNYLGGLIHP 187
+GEG +G V + N+N VA+K ++ Q + + L E+ L H
Sbjct: 33 IGEGAYGMVCSAYDNVNKVR---------VAIKKISPFEHQTYCQRTLREIKILLAFRHE 83
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR--RSLPLPWSIRMKIALDAAKGLAFLH 245
N++ + + ++ + +E L++ ++ L +GL ++H
Sbjct: 84 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 143
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDG-PEGDKTHVSTRVMGTYGYAAPEY 304
V++RD K SN+LL+ + K+ DFGLA+ P+ D T T + T Y APE
Sbjct: 144 SAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 200
Query: 305 VMTGHLTAKS-DVYSFGVVLLEMLTGR 330
++ KS D++S G +L EML+ R
Sbjct: 201 MLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 95/207 (45%), Gaps = 17/207 (8%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGH-KEWLAEVNYLGGLIHP 187
+GEG +G V + N+N VA+K ++ Q + + L E+ L H
Sbjct: 33 IGEGAYGMVCSAYDNVNKVR---------VAIKKISPFEHQTYCQRTLREIKILLAFRHE 83
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR--RSLPLPWSIRMKIALDAAKGLAFLH 245
N++ + + ++ + +E L++ ++ L +GL ++H
Sbjct: 84 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 143
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDG-PEGDKTHVSTRVMGTYGYAAPEY 304
V++RD K SN+LL+ + K+ DFGLA+ P+ D T T + T Y APE
Sbjct: 144 SAN---VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 200
Query: 305 VMTGHLTAKS-DVYSFGVVLLEMLTGR 330
++ KS D++S G +L EML+ R
Sbjct: 201 MLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 95/207 (45%), Gaps = 17/207 (8%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKE-WLAEVNYLGGLIHP 187
+GEG +G V + N+N VA+K ++ Q + + L E+ L H
Sbjct: 35 IGEGAYGMVCSAYDNLNKVR---------VAIKKISPFEHQTYXQRTLREIKILLRFRHE 85
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR--RSLPLPWSIRMKIALDAAKGLAFLH 245
N++ + + ++ + +E L++ ++ L +GL ++H
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 145
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDG-PEGDKTHVSTRVMGTYGYAAPEY 304
V++RD K SN+LL+ + K+ DFGLA+ P+ D T T + T Y APE
Sbjct: 146 SAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 202
Query: 305 VMTGHLTAKS-DVYSFGVVLLEMLTGR 330
++ KS D++S G +L EML+ R
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 91/209 (43%), Gaps = 16/209 (7%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKT-LNHDGLQGHKEWLAEVNYLGGLIHP 187
LG+G FG VY + K L V K L G++ + EV L HP
Sbjct: 13 LGKGKFGNVY-----LAREKQRKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHP 65
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEE 247
N+++L G + + L+ E+ P G++ L + S I + A L++ H
Sbjct: 66 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-ELANALSYCHS- 123
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
K VI+RD K N+LL K++DFG + P +T + GT Y PE +
Sbjct: 124 --KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GTLDYLPPEMIEG 177
Query: 308 GHLTAKSDVYSFGVVLLEMLTGRRSMDKN 336
K D++S GV+ E L G+ + N
Sbjct: 178 RMHDEKVDLWSLGVLCYEFLVGKPPFEAN 206
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 96/220 (43%), Gaps = 27/220 (12%)
Query: 119 ATKSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLN----HDGLQ-GHKE 173
AT + P +G G +G VYK P +G VA+K++ +GL
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKAR---------DPHSGHFVALKSVRVPNGEEGLPISTVR 52
Query: 174 WLAEVNYLGGLIHPNLVKLIGCCI--EDDQRL---LVYEFMPRGSLENHLFRRSLP-LPW 227
+A + L HPN+V+L+ C D+ + LV+E + + L +L + P LP
Sbjct: 53 EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPA 111
Query: 228 SIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKT 287
+ +GL FLH +++RD K NIL+ KL+DFGLA+
Sbjct: 112 ETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI---YSYQ 165
Query: 288 HVSTRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEML 327
V+ T Y APE ++ D++S G + EM
Sbjct: 166 MALFPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 93/212 (43%), Gaps = 27/212 (12%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGH-KEWLAEVNYLGGLIHP 187
+GEG +G V + N+N VA+K ++ Q + + L E+ L H
Sbjct: 51 IGEGAYGMVCSAYDNVNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFRHE 101
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHL-------FRRSLPLPWSIRMKIALDAAKG 240
N++ I D R E M L HL ++ L +G
Sbjct: 102 NIIG-----INDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRG 156
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDG-PEGDKTHVSTRVMGTYGY 299
L ++H V++RD K SN+LL+ + K+ DFGLA+ P+ D T T + T Y
Sbjct: 157 LKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWY 213
Query: 300 AAPEYVMTGHLTAKS-DVYSFGVVLLEMLTGR 330
APE ++ KS D++S G +L EML+ R
Sbjct: 214 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 95/207 (45%), Gaps = 17/207 (8%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGH-KEWLAEVNYLGGLIHP 187
+GEG +G V + N+N VA+K ++ Q + + L E+ L H
Sbjct: 35 IGEGAYGMVCSAYDNLNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFRHE 85
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR--RSLPLPWSIRMKIALDAAKGLAFLH 245
N++ + + ++ + +E L++ ++ L +GL ++H
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 145
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDG-PEGDKTHVSTRVMGTYGYAAPEY 304
V++RD K SN+LL+ + K+ DFGLA+ P+ D T T + T Y APE
Sbjct: 146 SAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 202
Query: 305 VMTGHLTAKS-DVYSFGVVLLEMLTGR 330
++ KS D++S G +L EML+ R
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 90/209 (43%), Gaps = 16/209 (7%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKT-LNHDGLQGHKEWLAEVNYLGGLIHP 187
LG+G FG VY + K L V K L G++ + EV L HP
Sbjct: 18 LGKGKFGNVY-----LAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHP 70
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEE 247
N+++L G + + L+ E+ P G++ L + S I + A L++ H
Sbjct: 71 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-ELANALSYCHS- 128
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
K VI+RD K N+LL K++DFG + P + + GT Y PE +
Sbjct: 129 --KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GTLDYLPPEMIEG 182
Query: 308 GHLTAKSDVYSFGVVLLEMLTGRRSMDKN 336
K D++S GV+ E L G+ + N
Sbjct: 183 RMHDEKVDLWSLGVLCYEFLVGKPPFEAN 211
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 101/209 (48%), Gaps = 24/209 (11%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLA-EVNYLGGLIH 186
LG+GGF Y+ I T V G +P ++ H KE ++ E+ L +
Sbjct: 33 FLGKGGFAKCYE--ITDMDTKEVFAGKVVPKSMLLKPH-----QKEKMSTEIAIHKSLDN 85
Query: 187 PNLVKLIGCCIEDDQRLLVYEFMPRGSL-ENHLFRRSLPLP---WSIRMKIALDAAKGLA 242
P++V G +DD +V E R SL E H R+++ P + +R I +G+
Sbjct: 86 PHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGVQ 140
Query: 243 FLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLA-KDGPEGDKTHVSTRVMGTYGYAA 301
+LH VI+RD K N+ L+ + + K+ DFGLA K +G++ + GT Y A
Sbjct: 141 YLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---KKDLCGTPNYIA 194
Query: 302 PEYVMTGHLTAKSDVYSFGVVLLEMLTGR 330
PE + + + D++S G +L +L G+
Sbjct: 195 PEVLCKKGHSFEVDIWSLGCILYTLLVGK 223
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 94/210 (44%), Gaps = 17/210 (8%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLA-EVNYLGGLIHP 187
LGEG +G V V T VAVK ++ E + E+ L H
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLF-RRSLPLPWSIRMKIALDAAKGLAFLHE 246
N+VK G E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 247 EAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM 306
+ +RD K N+LLD N K+SDFGLA ++ + ++ GT Y APE +
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 307 TGHLTAK-SDVYSFGVVLLEMLTGRRSMDK 335
A+ DV+S G+VL ML G D+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 94/210 (44%), Gaps = 17/210 (8%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHD-GLQGHKEWLAEVNYLGGLIHP 187
LGEG +G V V T VAVK ++ + + E+ L H
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLF-RRSLPLPWSIRMKIALDAAKGLAFLHE 246
N+VK G E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 247 EAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM 306
+ +RD K N+LLD N K+SDFGLA ++ + ++ GT Y APE +
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 307 TGHLTAK-SDVYSFGVVLLEMLTGRRSMDK 335
A+ DV+S G+VL ML G D+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 86/211 (40%), Gaps = 29/211 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
+G G F VYKG T T + + L Q KE E L GL HPN
Sbjct: 34 IGRGSFKTVYKGL----DTETTVEVAWCELQDRKLTKSERQRFKE---EAEXLKGLQHPN 86
Query: 189 LVKLIGC---------CIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAK 239
+V+ CI +LV E G+L+ +L R + +R K
Sbjct: 87 IVRFYDSWESTVKGKKCI-----VLVTELXTSGTLKTYLKRFKVXKIKVLR-SWCRQILK 140
Query: 240 GLAFLHEEAEKPVIYRDFKTSNILLDGEY-NAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 298
GL FLH P+I+RD K NI + G + K+ D GLA + + V+GT
Sbjct: 141 GLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLAT----LKRASFAKAVIGTPE 195
Query: 299 YAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
+ APE + DVY+FG LE T
Sbjct: 196 FXAPEXYEEKY-DESVDVYAFGXCXLEXATS 225
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 94/210 (44%), Gaps = 17/210 (8%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHD-GLQGHKEWLAEVNYLGGLIHP 187
LGEG +G V V T VAVK ++ + + E+ L H
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLF-RRSLPLPWSIRMKIALDAAKGLAFLHE 246
N+VK G E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 247 EAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM 306
+ +RD K N+LLD N K+SDFGLA ++ + ++ GT Y APE +
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 307 TGHLTAK-SDVYSFGVVLLEMLTGRRSMDK 335
A+ DV+S G+VL ML G D+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 95/207 (45%), Gaps = 17/207 (8%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGH-KEWLAEVNYLGGLIHP 187
+GEG +G V + ++ T VA+K ++ Q + + L E+ L H
Sbjct: 51 IGEGAYGMVSSAYDHVRKTR---------VAIKKISPFEHQTYCQRTLREIQILLRFRHE 101
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR--RSLPLPWSIRMKIALDAAKGLAFLH 245
N++ + + ++ + +E L++ +S L +GL ++H
Sbjct: 102 NVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLKYIH 161
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDG-PEGDKTHVSTRVMGTYGYAAPEY 304
V++RD K SN+L++ + K+ DFGLA+ PE D T T + T Y APE
Sbjct: 162 SAN---VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEI 218
Query: 305 VMTGHLTAKS-DVYSFGVVLLEMLTGR 330
++ KS D++S G +L EML+ R
Sbjct: 219 MLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 91/211 (43%), Gaps = 20/211 (9%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQG---HKEWLAEVNYLGGLI 185
LG+G FG VY + + +A+K L L+ + EV L
Sbjct: 18 LGKGKFGNVY---------LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 68
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLH 245
HPN+++L G + + L+ E+ P G++ L + S I + A L++ H
Sbjct: 69 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-ELANALSYCH 127
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV 305
K VI+RD K N+LL K+++FG + P + T + GT Y PE +
Sbjct: 128 S---KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR----TTLCGTLDYLPPEMI 180
Query: 306 MTGHLTAKSDVYSFGVVLLEMLTGRRSMDKN 336
K D++S GV+ E L G+ + N
Sbjct: 181 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 211
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 95/215 (44%), Gaps = 28/215 (13%)
Query: 126 ECL--LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLN-HDGLQGHK----EWLAEV 178
EC+ +GEG +G V+K NG G VA+K + G +G +A +
Sbjct: 14 ECVAEIGEGAYGKVFKARDLKNG--------GRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 179 NYLGGLIHPNLVKLIGCCI-----EDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMK 232
+L HPN+V+L C + + LV+E + + L +L + P +P
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKD 124
Query: 233 IALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTR 292
+ +GL FLH V++RD K NIL+ KL+DFGLA+ T
Sbjct: 125 MMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLAR---IYSFQMALTS 178
Query: 293 VMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEML 327
V+ T Y APE ++ D++S G + EM
Sbjct: 179 VVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 91/209 (43%), Gaps = 15/209 (7%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLA-EVNYLGGLIHP 187
LGEG +G V V T VAVK ++ E + E+ L H
Sbjct: 15 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEE 247
N+VK G E + + L E+ G L + + + +P + G+ +LH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
+ +RD K N+LLD N K+SDFGLA ++ + ++ GT Y APE +
Sbjct: 125 G---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 308 GHLTAK-SDVYSFGVVLLEMLTGRRSMDK 335
A+ DV+S G+VL ML G D+
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 95/215 (44%), Gaps = 28/215 (13%)
Query: 126 ECL--LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLN-HDGLQGHK----EWLAEV 178
EC+ +GEG +G V+K NG G VA+K + G +G +A +
Sbjct: 14 ECVAEIGEGAYGKVFKARDLKNG--------GRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 179 NYLGGLIHPNLVKLIGCCI-----EDDQRLLVYEFMPRGSLENHLFRRSLP-LPWSIRMK 232
+L HPN+V+L C + + LV+E + + L +L + P +P
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETIKD 124
Query: 233 IALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTR 292
+ +GL FLH V++RD K NIL+ KL+DFGLA+ T
Sbjct: 125 MMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLAR---IYSFQMALTS 178
Query: 293 VMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEML 327
V+ T Y APE ++ D++S G + EM
Sbjct: 179 VVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 90/209 (43%), Gaps = 16/209 (7%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKT-LNHDGLQGHKEWLAEVNYLGGLIHP 187
LG+G FG VY + K L V K L G++ + EV L HP
Sbjct: 19 LGKGKFGNVY-----LAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHP 71
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEE 247
N+++L G + + L+ E+ P G++ L + S I + A L++ H
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-ELANALSYCHS- 129
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
K VI+RD K N+LL K++DFG + P + + GT Y PE +
Sbjct: 130 --KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC----GTLDYLPPEMIEG 183
Query: 308 GHLTAKSDVYSFGVVLLEMLTGRRSMDKN 336
K D++S GV+ E L G+ + N
Sbjct: 184 RMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 95/207 (45%), Gaps = 17/207 (8%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGH-KEWLAEVNYLGGLIHP 187
+GEG +G V + N+N VA+K ++ Q + + L E+ L H
Sbjct: 36 IGEGAYGMVCSAYDNLNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFRHE 86
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR--RSLPLPWSIRMKIALDAAKGLAFLH 245
N++ + + ++ + +E L++ ++ L +GL ++H
Sbjct: 87 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 146
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDG-PEGDKTHVSTRVMGTYGYAAPEY 304
V++RD K SN+LL+ + K+ DFGLA+ P+ D T T + T Y APE
Sbjct: 147 SAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 203
Query: 305 VMTGHLTAKS-DVYSFGVVLLEMLTGR 330
++ KS D++S G +L EML+ R
Sbjct: 204 MLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 95/207 (45%), Gaps = 17/207 (8%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGH-KEWLAEVNYLGGLIHP 187
+GEG +G V + N+N VA+K ++ Q + + L E+ L H
Sbjct: 37 IGEGAYGMVCSAYDNLNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFRHE 87
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR--RSLPLPWSIRMKIALDAAKGLAFLH 245
N++ + + ++ + +E L++ ++ L +GL ++H
Sbjct: 88 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 147
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDG-PEGDKTHVSTRVMGTYGYAAPEY 304
V++RD K SN+LL+ + K+ DFGLA+ P+ D T T + T Y APE
Sbjct: 148 SAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 204
Query: 305 VMTGHLTAKS-DVYSFGVVLLEMLTGR 330
++ KS D++S G +L EML+ R
Sbjct: 205 MLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 95/207 (45%), Gaps = 17/207 (8%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGH-KEWLAEVNYLGGLIHP 187
+GEG +G V + N+N VA+K ++ Q + + L E+ L H
Sbjct: 28 IGEGAYGMVCSAYDNLNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFRHE 78
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR--RSLPLPWSIRMKIALDAAKGLAFLH 245
N++ + + ++ + +E L++ ++ L +GL ++H
Sbjct: 79 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 138
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDG-PEGDKTHVSTRVMGTYGYAAPEY 304
V++RD K SN+LL+ + K+ DFGLA+ P+ D T T + T Y APE
Sbjct: 139 SAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 195
Query: 305 VMTGHLTAKS-DVYSFGVVLLEMLTGR 330
++ KS D++S G +L EML+ R
Sbjct: 196 MLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 95/207 (45%), Gaps = 17/207 (8%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGH-KEWLAEVNYLGGLIHP 187
+GEG +G V + N+N VA+K ++ Q + + L E+ L H
Sbjct: 35 IGEGAYGMVCSAYDNLNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFRHE 85
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR--RSLPLPWSIRMKIALDAAKGLAFLH 245
N++ + + ++ + +E L++ ++ L +GL ++H
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 145
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDG-PEGDKTHVSTRVMGTYGYAAPEY 304
V++RD K SN+LL+ + K+ DFGLA+ P+ D T T + T Y APE
Sbjct: 146 SAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 202
Query: 305 VMTGHLTAKS-DVYSFGVVLLEMLTGR 330
++ KS D++S G +L EML+ R
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 94/210 (44%), Gaps = 17/210 (8%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLA-EVNYLGGLIHP 187
LGEG +G V V T VAVK ++ E + E+ L H
Sbjct: 15 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 65
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLF-RRSLPLPWSIRMKIALDAAKGLAFLHE 246
N+VK G E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 123
Query: 247 EAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM 306
+ +RD K N+LLD N K+SDFGLA ++ + ++ GT Y APE +
Sbjct: 124 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 180
Query: 307 TGHLTAK-SDVYSFGVVLLEMLTGRRSMDK 335
A+ DV+S G+VL ML G D+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 94/210 (44%), Gaps = 17/210 (8%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHD-GLQGHKEWLAEVNYLGGLIHP 187
LGEG +G V V T VAVK ++ + + E+ L H
Sbjct: 15 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHE 65
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLF-RRSLPLPWSIRMKIALDAAKGLAFLHE 246
N+VK G E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 123
Query: 247 EAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM 306
+ +RD K N+LLD N K+SDFGLA ++ + ++ GT Y APE +
Sbjct: 124 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 307 TGHLTAK-SDVYSFGVVLLEMLTGRRSMDK 335
A+ DV+S G+VL ML G D+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 76/166 (45%), Gaps = 19/166 (11%)
Query: 171 HKEWLAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIR 230
H+E E++ L L HPN++KL + LV EF G L + R
Sbjct: 90 HEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRH-KFDECDA 148
Query: 231 MKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGE---YNAKLSDFGL----AKDGPE 283
I G+ +LH+ +++RD K NILL+ + N K+ DFGL +KD
Sbjct: 149 ANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKL 205
Query: 284 GDKTHVSTRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
D+ +GT Y APE V+ K DV+S GV++ +L G
Sbjct: 206 RDR-------LGTAYYIAPE-VLKKKYNEKCDVWSCGVIMYILLCG 243
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 95/207 (45%), Gaps = 17/207 (8%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGH-KEWLAEVNYLGGLIHP 187
+GEG +G V + N+N VA+K ++ Q + + L E+ L H
Sbjct: 29 IGEGAYGMVCSAYDNLNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFRHE 79
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR--RSLPLPWSIRMKIALDAAKGLAFLH 245
N++ + + ++ + +E L++ ++ L +GL ++H
Sbjct: 80 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 139
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDG-PEGDKTHVSTRVMGTYGYAAPEY 304
V++RD K SN+LL+ + K+ DFGLA+ P+ D T T + T Y APE
Sbjct: 140 SAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 196
Query: 305 VMTGHLTAKS-DVYSFGVVLLEMLTGR 330
++ KS D++S G +L EML+ R
Sbjct: 197 MLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 95/207 (45%), Gaps = 17/207 (8%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGH-KEWLAEVNYLGGLIHP 187
+GEG +G V + N+N VA+K ++ Q + + L E+ L H
Sbjct: 29 IGEGAYGMVCSAYDNLNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFRHE 79
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR--RSLPLPWSIRMKIALDAAKGLAFLH 245
N++ + + ++ + +E L++ ++ L +GL ++H
Sbjct: 80 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 139
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDG-PEGDKTHVSTRVMGTYGYAAPEY 304
V++RD K SN+LL+ + K+ DFGLA+ P+ D T T + T Y APE
Sbjct: 140 SAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 196
Query: 305 VMTGHLTAKS-DVYSFGVVLLEMLTGR 330
++ KS D++S G +L EML+ R
Sbjct: 197 MLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 95/207 (45%), Gaps = 17/207 (8%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGH-KEWLAEVNYLGGLIHP 187
+GEG +G V + N+N VA+K ++ Q + + L E+ L H
Sbjct: 31 IGEGAYGMVCSAYDNVNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFRHE 81
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR--RSLPLPWSIRMKIALDAAKGLAFLH 245
N++ + + ++ + +E L++ ++ L +GL ++H
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 141
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDG-PEGDKTHVSTRVMGTYGYAAPEY 304
V++RD K SN+LL+ + K+ DFGLA+ P+ D T T + T Y APE
Sbjct: 142 SAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 198
Query: 305 VMTGHLTAKS-DVYSFGVVLLEMLTGR 330
++ KS D++S G +L EML+ R
Sbjct: 199 MLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 95/207 (45%), Gaps = 17/207 (8%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGH-KEWLAEVNYLGGLIHP 187
+GEG +G V + N+N VA+K ++ Q + + L E+ L H
Sbjct: 31 IGEGAYGMVCSAYDNVNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFRHE 81
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR--RSLPLPWSIRMKIALDAAKGLAFLH 245
N++ + + ++ + +E L++ ++ L +GL ++H
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 141
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDG-PEGDKTHVSTRVMGTYGYAAPEY 304
V++RD K SN+LL+ + K+ DFGLA+ P+ D T T + T Y APE
Sbjct: 142 SAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 198
Query: 305 VMTGHLTAKS-DVYSFGVVLLEMLTGR 330
++ KS D++S G +L EML+ R
Sbjct: 199 MLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 94/210 (44%), Gaps = 17/210 (8%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHD-GLQGHKEWLAEVNYLGGLIHP 187
LGEG +G V V T VAVK ++ + + E+ L H
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLF-RRSLPLPWSIRMKIALDAAKGLAFLHE 246
N+VK G E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 247 EAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM 306
+ +RD K N+LLD N K+SDFGLA ++ + ++ GT Y APE +
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 307 TGHLTAK-SDVYSFGVVLLEMLTGRRSMDK 335
A+ DV+S G+VL ML G D+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 95/207 (45%), Gaps = 17/207 (8%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGH-KEWLAEVNYLGGLIHP 187
+GEG +G V + N+N VA+K ++ Q + + L E+ L H
Sbjct: 31 IGEGAYGMVCSAYDNVNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFRHE 81
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR--RSLPLPWSIRMKIALDAAKGLAFLH 245
N++ + + ++ + +E L++ ++ L +GL ++H
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 141
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDG-PEGDKTHVSTRVMGTYGYAAPEY 304
V++RD K SN+LL+ + K+ DFGLA+ P+ D T T + T Y APE
Sbjct: 142 SAN---VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 198
Query: 305 VMTGHLTAKS-DVYSFGVVLLEMLTGR 330
++ KS D++S G +L EML+ R
Sbjct: 199 MLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 94/210 (44%), Gaps = 17/210 (8%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHD-GLQGHKEWLAEVNYLGGLIHP 187
LGEG +G V V T VAVK ++ + + E+ L H
Sbjct: 13 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 63
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLF-RRSLPLPWSIRMKIALDAAKGLAFLHE 246
N+VK G E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 64 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 121
Query: 247 EAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM 306
+ +RD K N+LLD N K+SDFGLA ++ + ++ GT Y APE +
Sbjct: 122 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 178
Query: 307 TGHLTAK-SDVYSFGVVLLEMLTGRRSMDK 335
A+ DV+S G+VL ML G D+
Sbjct: 179 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 208
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 90/209 (43%), Gaps = 16/209 (7%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKT-LNHDGLQGHKEWLAEVNYLGGLIHP 187
LG+G FG VY + K L V K L G++ + EV L HP
Sbjct: 17 LGKGKFGNVY-----LAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHP 69
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEE 247
N+++L G + + L+ E+ P G++ L + S I + A L++ H
Sbjct: 70 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-ELANALSYCHS- 127
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
K VI+RD K N+LL K++DFG + P + + GT Y PE +
Sbjct: 128 --KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----DTLCGTLDYLPPEMIEG 181
Query: 308 GHLTAKSDVYSFGVVLLEMLTGRRSMDKN 336
K D++S GV+ E L G+ + N
Sbjct: 182 RMHDEKVDLWSLGVLCYEFLVGKPPFEAN 210
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 101/217 (46%), Gaps = 35/217 (16%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWL--AEVNYLGGLIH 186
+G+G FG V++G G VAVK + + + W AE+ L H
Sbjct: 11 IGKGRFGEVWRG-----------KWRGEEVAVKIFSS---REERSWFREAEIYQTVMLRH 56
Query: 187 PNLVKLIGCCIEDD----QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLA 242
N++ I +D+ Q LV ++ GSL ++L R ++ + I K+AL A GLA
Sbjct: 57 ENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI--KLALSTASGLA 114
Query: 243 FLHEEAE----KPVI-YRDFKTSNILLDGEYNAKLSDFGLA-KDGPEGDKTHVS-TRVMG 295
LH E KP I +RD K+ NIL+ ++D GLA + D ++ +G
Sbjct: 115 HLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVG 174
Query: 296 TYGYAAPEY----VMTGHLTA--KSDVYSFGVVLLEM 326
T Y APE + H + ++D+Y+ G+V E+
Sbjct: 175 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 94/210 (44%), Gaps = 17/210 (8%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLA-EVNYLGGLIHP 187
LGEG +G V V T VAVK ++ E + E+ L H
Sbjct: 15 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLF-RRSLPLPWSIRMKIALDAAKGLAFLHE 246
N+VK G E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 123
Query: 247 EAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM 306
+ +RD K N+LLD N K+SDFGLA ++ + ++ GT Y APE +
Sbjct: 124 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 307 TGHLTAK-SDVYSFGVVLLEMLTGRRSMDK 335
A+ DV+S G+VL ML G D+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 95/207 (45%), Gaps = 17/207 (8%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGH-KEWLAEVNYLGGLIHP 187
+GEG +G V + N+N VA+K ++ Q + + L E+ L H
Sbjct: 31 IGEGAYGMVCSAYDNVNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFRHE 81
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR--RSLPLPWSIRMKIALDAAKGLAFLH 245
N++ + + ++ + +E L++ ++ L +GL ++H
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 141
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDG-PEGDKTHVSTRVMGTYGYAAPEY 304
V++RD K SN+LL+ + K+ DFGLA+ P+ D T T + T Y APE
Sbjct: 142 SAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 198
Query: 305 VMTGHLTAKS-DVYSFGVVLLEMLTGR 330
++ KS D++S G +L EML+ R
Sbjct: 199 MLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 94/210 (44%), Gaps = 17/210 (8%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLA-EVNYLGGLIHP 187
LGEG +G V V T VAVK ++ E + E+ L H
Sbjct: 15 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLF-RRSLPLPWSIRMKIALDAAKGLAFLHE 246
N+VK G E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 123
Query: 247 EAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM 306
+ +RD K N+LLD N K+SDFGLA ++ + ++ GT Y APE +
Sbjct: 124 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 307 TGHLTAK-SDVYSFGVVLLEMLTGRRSMDK 335
A+ DV+S G+VL ML G D+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 94/210 (44%), Gaps = 17/210 (8%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLA-EVNYLGGLIHP 187
LGEG +G V V T VAVK ++ E + E+ L H
Sbjct: 15 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLF-RRSLPLPWSIRMKIALDAAKGLAFLHE 246
N+VK G E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 123
Query: 247 EAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM 306
+ +RD K N+LLD N K+SDFGLA ++ + ++ GT Y APE +
Sbjct: 124 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 307 TGHLTAK-SDVYSFGVVLLEMLTGRRSMDK 335
A+ DV+S G+VL ML G D+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 94/210 (44%), Gaps = 17/210 (8%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHD-GLQGHKEWLAEVNYLGGLIHP 187
LGEG +G V V T VAVK ++ + + E+ L H
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLF-RRSLPLPWSIRMKIALDAAKGLAFLHE 246
N+VK G E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 247 EAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM 306
+ +RD K N+LLD N K+SDFGLA ++ + ++ GT Y APE +
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 307 TGHLTAK-SDVYSFGVVLLEMLTGRRSMDK 335
A+ DV+S G+VL ML G D+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 94/210 (44%), Gaps = 17/210 (8%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLA-EVNYLGGLIHP 187
LGEG +G V V T VAVK ++ E + E+ L H
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLF-RRSLPLPWSIRMKIALDAAKGLAFLHE 246
N+VK G E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 247 EAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM 306
+ +RD K N+LLD N K+SDFGLA ++ + ++ GT Y APE +
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 307 TGHLTAK-SDVYSFGVVLLEMLTGRRSMDK 335
A+ DV+S G+VL ML G D+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 95/207 (45%), Gaps = 17/207 (8%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGH-KEWLAEVNYLGGLIHP 187
+GEG +G V + N+N VA+K ++ Q + + L E+ L H
Sbjct: 51 IGEGAYGMVCSAYDNVNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFRHE 101
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR--RSLPLPWSIRMKIALDAAKGLAFLH 245
N++ + + ++ + +E L++ ++ L +GL ++H
Sbjct: 102 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 161
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDG-PEGDKTHVSTRVMGTYGYAAPEY 304
V++RD K SN+LL+ + K+ DFGLA+ P+ D T T + T Y APE
Sbjct: 162 SAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 218
Query: 305 VMTGHLTAKS-DVYSFGVVLLEMLTGR 330
++ KS D++S G +L EML+ R
Sbjct: 219 MLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 95/207 (45%), Gaps = 17/207 (8%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGH-KEWLAEVNYLGGLIHP 187
+GEG +G V + N+N VA+K ++ Q + + L E+ L H
Sbjct: 33 IGEGAYGMVCSAYDNVNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFRHE 83
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR--RSLPLPWSIRMKIALDAAKGLAFLH 245
N++ + + ++ + +E L++ ++ L +GL ++H
Sbjct: 84 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 143
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDG-PEGDKTHVSTRVMGTYGYAAPEY 304
V++RD K SN+LL+ + K+ DFGLA+ P+ D T T + T Y APE
Sbjct: 144 SAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 200
Query: 305 VMTGHLTAKS-DVYSFGVVLLEMLTGR 330
++ KS D++S G +L EML+ R
Sbjct: 201 MLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 94/210 (44%), Gaps = 17/210 (8%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLA-EVNYLGGLIHP 187
LGEG +G V V T VAVK ++ E + E+ L H
Sbjct: 15 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLF-RRSLPLPWSIRMKIALDAAKGLAFLHE 246
N+VK G E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 123
Query: 247 EAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM 306
+ +RD K N+LLD N K+SDFGLA ++ + ++ GT Y APE +
Sbjct: 124 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 307 TGHLTAK-SDVYSFGVVLLEMLTGRRSMDK 335
A+ DV+S G+VL ML G D+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 91/211 (43%), Gaps = 20/211 (9%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQG---HKEWLAEVNYLGGLI 185
LG+G FG VY + + +A+K L L+ + EV L
Sbjct: 19 LGKGKFGNVY---------LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 69
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLH 245
HPN+++L G + + L+ E+ P G++ L + S I + A L++ H
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-ELANALSYCH 128
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV 305
K VI+RD K N+LL K+++FG + P +T + GT Y PE +
Sbjct: 129 S---KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLC----GTLDYLPPEMI 181
Query: 306 MTGHLTAKSDVYSFGVVLLEMLTGRRSMDKN 336
K D++S GV+ E L G+ + N
Sbjct: 182 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 101/217 (46%), Gaps = 35/217 (16%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWL--AEVNYLGGLIH 186
+G+G FG V++G G VAVK + + + W AE+ L H
Sbjct: 12 IGKGRFGEVWRG-----------KWRGEEVAVKIFSS---REERSWFREAEIYQTVMLRH 57
Query: 187 PNLVKLIGCCIEDD----QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLA 242
N++ I +D+ Q LV ++ GSL ++L R ++ + I K+AL A GLA
Sbjct: 58 ENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI--KLALSTASGLA 115
Query: 243 FLHEEAE----KPVI-YRDFKTSNILLDGEYNAKLSDFGLA-KDGPEGDKTHVS-TRVMG 295
LH E KP I +RD K+ NIL+ ++D GLA + D ++ +G
Sbjct: 116 HLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVG 175
Query: 296 TYGYAAPEY----VMTGHLTA--KSDVYSFGVVLLEM 326
T Y APE + H + ++D+Y+ G+V E+
Sbjct: 176 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 101/217 (46%), Gaps = 35/217 (16%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWL--AEVNYLGGLIH 186
+G+G FG V++G G VAVK + + + W AE+ L H
Sbjct: 14 IGKGRFGEVWRG-----------KWRGEEVAVKIFSS---REERSWFREAEIYQTVMLRH 59
Query: 187 PNLVKLIGCCIEDD----QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLA 242
N++ I +D+ Q LV ++ GSL ++L R ++ + I K+AL A GLA
Sbjct: 60 ENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI--KLALSTASGLA 117
Query: 243 FLHEEAE----KPVI-YRDFKTSNILLDGEYNAKLSDFGLA-KDGPEGDKTHVS-TRVMG 295
LH E KP I +RD K+ NIL+ ++D GLA + D ++ +G
Sbjct: 118 HLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVG 177
Query: 296 TYGYAAPEY----VMTGHLTA--KSDVYSFGVVLLEM 326
T Y APE + H + ++D+Y+ G+V E+
Sbjct: 178 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 90/209 (43%), Gaps = 16/209 (7%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKT-LNHDGLQGHKEWLAEVNYLGGLIHP 187
LG+G FG VY + K L V K L G++ + EV L HP
Sbjct: 19 LGKGKFGNVY-----LAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHP 71
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEE 247
N+++L G + + L+ E+ P G++ L + S I + A L++ H
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-ELANALSYCHS- 129
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
K VI+RD K N+LL K++DFG + P + + GT Y PE +
Sbjct: 130 --KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GTLDYLPPEMIEG 183
Query: 308 GHLTAKSDVYSFGVVLLEMLTGRRSMDKN 336
K D++S GV+ E L G+ + N
Sbjct: 184 RMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 94/210 (44%), Gaps = 17/210 (8%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLA-EVNYLGGLIHP 187
LGEG +G V V T VAVK ++ E + E+ L H
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLF-RRSLPLPWSIRMKIALDAAKGLAFLHE 246
N+VK G E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 247 EAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM 306
+ +RD K N+LLD N K+SDFGLA ++ + ++ GT Y APE +
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 307 TGHLTAK-SDVYSFGVVLLEMLTGRRSMDK 335
A+ DV+S G+VL ML G D+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 101/217 (46%), Gaps = 35/217 (16%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWL--AEVNYLGGLIH 186
+G+G FG V++G G VAVK + + + W AE+ L H
Sbjct: 17 IGKGRFGEVWRG-----------KWRGEEVAVKIFSS---REERSWFREAEIYQTVMLRH 62
Query: 187 PNLVKLIGCCIEDD----QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLA 242
N++ I +D+ Q LV ++ GSL ++L R ++ + I K+AL A GLA
Sbjct: 63 ENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI--KLALSTASGLA 120
Query: 243 FLHEEAE----KPVI-YRDFKTSNILLDGEYNAKLSDFGLA-KDGPEGDKTHVS-TRVMG 295
LH E KP I +RD K+ NIL+ ++D GLA + D ++ +G
Sbjct: 121 HLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVG 180
Query: 296 TYGYAAPEY----VMTGHLTA--KSDVYSFGVVLLEM 326
T Y APE + H + ++D+Y+ G+V E+
Sbjct: 181 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 90/209 (43%), Gaps = 16/209 (7%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKT-LNHDGLQGHKEWLAEVNYLGGLIHP 187
LG+G FG VY + K L V K L G++ + EV L HP
Sbjct: 16 LGKGKFGNVY-----LAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHP 68
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEE 247
N+++L G + + L+ E+ P G++ L + S I + A L++ H
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-ELANALSYCHS- 126
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
K VI+RD K N+LL K++DFG + P + + GT Y PE +
Sbjct: 127 --KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GTLDYLPPEMIEG 180
Query: 308 GHLTAKSDVYSFGVVLLEMLTGRRSMDKN 336
K D++S GV+ E L G+ + N
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 94/210 (44%), Gaps = 17/210 (8%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHD-GLQGHKEWLAEVNYLGGLIHP 187
LGEG +G V V T VAVK ++ + + E+ L H
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLF-RRSLPLPWSIRMKIALDAAKGLAFLHE 246
N+VK G E + + L E+ G L + + +P P + R L A G+ +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVVYLHG 122
Query: 247 EAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM 306
+ +RD K N+LLD N K+SDFGLA ++ + ++ GT Y APE +
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 307 TGHLTAK-SDVYSFGVVLLEMLTGRRSMDK 335
A+ DV+S G+VL ML G D+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 101/217 (46%), Gaps = 35/217 (16%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWL--AEVNYLGGLIH 186
+G+G FG V++G G VAVK + + + W AE+ L H
Sbjct: 37 IGKGRFGEVWRG-----------KWRGEEVAVKIFSS---REERSWFREAEIYQTVMLRH 82
Query: 187 PNLVKLIGCCIEDD----QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLA 242
N++ I +D+ Q LV ++ GSL ++L R ++ + I K+AL A GLA
Sbjct: 83 ENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI--KLALSTASGLA 140
Query: 243 FLHEEAE----KPVI-YRDFKTSNILLDGEYNAKLSDFGLA-KDGPEGDKTHVS-TRVMG 295
LH E KP I +RD K+ NIL+ ++D GLA + D ++ +G
Sbjct: 141 HLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVG 200
Query: 296 TYGYAAPEY----VMTGHLTA--KSDVYSFGVVLLEM 326
T Y APE + H + ++D+Y+ G+V E+
Sbjct: 201 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 95/207 (45%), Gaps = 17/207 (8%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGH-KEWLAEVNYLGGLIHP 187
+GEG +G V + N+N VA+K ++ Q + + L E+ L H
Sbjct: 39 IGEGAYGMVCSAYDNVNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFRHE 89
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR--RSLPLPWSIRMKIALDAAKGLAFLH 245
N++ + + ++ + +E L++ ++ L +GL ++H
Sbjct: 90 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 149
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDG-PEGDKTHVSTRVMGTYGYAAPEY 304
V++RD K SN+LL+ + K+ DFGLA+ P+ D T T + T Y APE
Sbjct: 150 SAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 206
Query: 305 VMTGHLTAKS-DVYSFGVVLLEMLTGR 330
++ KS D++S G +L EML+ R
Sbjct: 207 MLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 95/207 (45%), Gaps = 17/207 (8%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGH-KEWLAEVNYLGGLIHP 187
+GEG +G V + N+N VA+K ++ Q + + L E+ L H
Sbjct: 31 IGEGAYGMVCSAYDNVNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFRHE 81
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR--RSLPLPWSIRMKIALDAAKGLAFLH 245
N++ + + ++ + +E L++ ++ L +GL ++H
Sbjct: 82 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 141
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDG-PEGDKTHVSTRVMGTYGYAAPEY 304
V++RD K SN+LL+ + K+ DFGLA+ P+ D T T + T Y APE
Sbjct: 142 SAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 198
Query: 305 VMTGHLTAKS-DVYSFGVVLLEMLTGR 330
++ KS D++S G +L EML+ R
Sbjct: 199 MLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 91/212 (42%), Gaps = 21/212 (9%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLA-EVNYLGGLIHP 187
LGEG +G V V T VAVK ++ E + E+ L H
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP---LPWSIRMKIALDAAKGLAFL 244
N+VK G E + + L E+ G L F R P +P + G+ +L
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 245 HEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEY 304
H + +RD K N+LLD N K+SDFGLA ++ + ++ GT Y APE
Sbjct: 121 HGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 305 VMTGHLTAK-SDVYSFGVVLLEMLTGRRSMDK 335
+ A+ DV+S G+VL ML G D+
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 94/207 (45%), Gaps = 17/207 (8%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGH-KEWLAEVNYLGGLIHP 187
+GEG +G V + N+N VA+K ++ Q + + L E+ L H
Sbjct: 35 IGEGAYGMVCSAYDNLNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFRHE 85
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR--RSLPLPWSIRMKIALDAAKGLAFLH 245
N++ + + ++ + +E L++ + L +GL ++H
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRGLKYIH 145
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDG-PEGDKTHVSTRVMGTYGYAAPEY 304
V++RD K SN+LL+ + K+ DFGLA+ P+ D T T + T Y APE
Sbjct: 146 SAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 202
Query: 305 VMTGHLTAKS-DVYSFGVVLLEMLTGR 330
++ KS D++S G +L EML+ R
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 91/212 (42%), Gaps = 21/212 (9%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLA-EVNYLGGLIHP 187
LGEG +G V V T VAVK ++ E + E+ L H
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP---LPWSIRMKIALDAAKGLAFL 244
N+VK G E + + L E+ G L F R P +P + G+ +L
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 245 HEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEY 304
H + +RD K N+LLD N K+SDFGLA ++ + ++ GT Y APE
Sbjct: 121 HGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 177
Query: 305 VMTGHLTAK-SDVYSFGVVLLEMLTGRRSMDK 335
+ A+ DV+S G+VL ML G D+
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 90/209 (43%), Gaps = 16/209 (7%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKT-LNHDGLQGHKEWLAEVNYLGGLIHP 187
LG+G FG VY + K L V K L G++ + EV L HP
Sbjct: 16 LGKGKFGNVY-----LAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHP 68
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEE 247
N+++L G + + L+ E+ P G++ L + S I + A L++ H
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-ELANALSYCHS- 126
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
K VI+RD K N+LL K++DFG + P + + GT Y PE +
Sbjct: 127 --KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC----GTLDYLPPEMIEG 180
Query: 308 GHLTAKSDVYSFGVVLLEMLTGRRSMDKN 336
K D++S GV+ E L G+ + N
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 101/217 (46%), Gaps = 35/217 (16%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWL--AEVNYLGGLIH 186
+G+G FG V++G G VAVK + + + W AE+ L H
Sbjct: 50 IGKGRFGEVWRG-----------KWRGEEVAVKIFSS---REERSWFREAEIYQTVMLRH 95
Query: 187 PNLVKLIGCCIEDD----QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLA 242
N++ I +D+ Q LV ++ GSL ++L R ++ + I K+AL A GLA
Sbjct: 96 ENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMI--KLALSTASGLA 153
Query: 243 FLHEEAE----KPVI-YRDFKTSNILLDGEYNAKLSDFGLA-KDGPEGDKTHVS-TRVMG 295
LH E KP I +RD K+ NIL+ ++D GLA + D ++ +G
Sbjct: 154 HLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVG 213
Query: 296 TYGYAAPEY----VMTGHLTA--KSDVYSFGVVLLEM 326
T Y APE + H + ++D+Y+ G+V E+
Sbjct: 214 TKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 91/209 (43%), Gaps = 15/209 (7%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHD-GLQGHKEWLAEVNYLGGLIHP 187
LGEG +G V V T VAVK ++ + + E+ L H
Sbjct: 14 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEE 247
N+VK G E + + L E+ G L + + + +P + G+ +LH
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRI-EPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
+ +RD K N+LLD N K+SDFGLA ++ + ++ GT Y APE +
Sbjct: 124 G---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 308 GHLTAK-SDVYSFGVVLLEMLTGRRSMDK 335
A+ DV+S G+VL ML G D+
Sbjct: 181 REFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 9/159 (5%)
Query: 175 LAEVNYLGGLIHPNLVKLIGCCIEDDQRLL--VYEFMPRGSLENHLF-----RRSLPLPW 227
++EVN L L HPN+V+ I+ L V E+ G L + + R+ L +
Sbjct: 53 VSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEF 112
Query: 228 SIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKT 287
+R+ L A + V++RD K +N+ LDG+ N KL DFGLA+ +
Sbjct: 113 VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDED- 171
Query: 288 HVSTRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEM 326
+ +GT Y +PE + KSD++S G +L E+
Sbjct: 172 -FAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 209
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 90/209 (43%), Gaps = 16/209 (7%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKT-LNHDGLQGHKEWLAEVNYLGGLIHP 187
LG+G FG VY + K L V K L G++ + EV L HP
Sbjct: 19 LGKGKFGNVY-----LAREKQSKFILALKVLFKAQLEKAGVE--HQLRREVEIQSHLRHP 71
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEE 247
N+++L G + + L+ E+ P G++ L + S I + A L++ H
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT-ELANALSYCHS- 129
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
K VI+RD K N+LL K++DFG + P + + GT Y PE +
Sbjct: 130 --KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC----GTLDYLPPEMIEG 183
Query: 308 GHLTAKSDVYSFGVVLLEMLTGRRSMDKN 336
K D++S GV+ E L G+ + N
Sbjct: 184 RMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 95/207 (45%), Gaps = 17/207 (8%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGH-KEWLAEVNYLGGLIHP 187
+GEG +G V + N+N VA++ ++ Q + + L E+ L H
Sbjct: 35 IGEGAYGMVCSAYDNLNKVR---------VAIRKISPFEHQTYCQRTLREIKILLRFRHE 85
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR--RSLPLPWSIRMKIALDAAKGLAFLH 245
N++ + + ++ + +E L++ ++ L +GL ++H
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 145
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDG-PEGDKTHVSTRVMGTYGYAAPEY 304
V++RD K SN+LL+ + K+ DFGLA+ P+ D T T + T Y APE
Sbjct: 146 SAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 202
Query: 305 VMTGHLTAKS-DVYSFGVVLLEMLTGR 330
++ KS D++S G +L EML+ R
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 88/202 (43%), Gaps = 16/202 (7%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKT-LNHDGLQGHKEWLAEVNYLGGLIHP 187
LG+G FG VY + K L V KT L G++ + EV L HP
Sbjct: 20 LGKGKFGNVY-----LARERQSKFILALKVLFKTQLEKAGVE--HQLRREVEIQSHLRHP 72
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEE 247
N+++L G + + L+ E+ P G++ L + S I + A L++ H
Sbjct: 73 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYIT-ELANALSYCHS- 130
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
K VI+RD K N+LL K++DFG + P + + GT Y PE +
Sbjct: 131 --KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR----DTLCGTLDYLPPEMIEG 184
Query: 308 GHLTAKSDVYSFGVVLLEMLTG 329
K D++S GV+ E L G
Sbjct: 185 RMHDEKVDLWSLGVLCYEFLVG 206
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 91/212 (42%), Gaps = 21/212 (9%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHD-GLQGHKEWLAEVNYLGGLIHP 187
LGEG +G V V T VAVK ++ + + E+ L H
Sbjct: 15 LGEGAYGEV---------QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLP---LPWSIRMKIALDAAKGLAFL 244
N+VK G E + + L E+ G L F R P +P + G+ +L
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 245 HEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEY 304
H + +RD K N+LLD N K+SDFGLA ++ + ++ GT Y APE
Sbjct: 122 HGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 305 VMTGHLTAK-SDVYSFGVVLLEMLTGRRSMDK 335
+ A+ DV+S G+VL ML G D+
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 97/235 (41%), Gaps = 39/235 (16%)
Query: 109 RKFSFNELKSATKSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKT-LNHDG 167
RKF+ ++ RP LG+G FG VY N K L V K+ L +G
Sbjct: 9 RKFTIDDFDIV----RP---LGKGKFGNVYLAREKQN-----KFIMALKVLFKSQLEKEG 56
Query: 168 LQGHKEWLAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPW 227
++ + E+ L HPN++++ + + L+ EF PRG L L +
Sbjct: 57 VE--HQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG----- 109
Query: 228 SIRMKIALDAAKGLAFLHEEA-------EKPVIYRDFKTSNILLDGEYNAKLSDFGLAKD 280
D + F+ E A E+ VI+RD K N+L+ + K++DFG +
Sbjct: 110 ------RFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVH 163
Query: 281 GPEGDKTHVSTRVM-GTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTGRRSMD 334
P + R M GT Y PE + K D++ GV+ E L G D
Sbjct: 164 APS-----LRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 136/318 (42%), Gaps = 65/318 (20%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVN-YLGGLI- 185
L+G G +G VYKG ++ PVAVK + Q ++ E N Y L+
Sbjct: 20 LIGRGRYGAVYKGSLDER-----------PVAVKVFSFANRQN---FINEKNIYRVPLME 65
Query: 186 HPNLVKLI--GCCIEDDQR---LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
H N+ + I + D R LLV E+ P GSL +L + W ++A +G
Sbjct: 66 HDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSD--WVSSCRLAHSVTRG 123
Query: 241 LAFLHEEA-----EKPVI-YRDFKTSNILLDGEYNAKLSDFGLA------KDGPEGDKTH 288
LA+LH E KP I +RD + N+L+ + +SDFGL+ + G++ +
Sbjct: 124 LAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDN 183
Query: 289 VSTRVMGTYGYAAPEYVMTGHLTAKS--------DVYSFGVVLLEML-----------TG 329
+ +GT Y APE V+ G + + D+Y+ G++ E+
Sbjct: 184 AAISEVGTIRYMAPE-VLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVP 242
Query: 330 RRSMDKNRPNGEHNLVEWARPQLGERRRFYRLIDPCLEGCFSIKGAEKTIQLAASCLNRD 389
M G H E + + ++ + + E +++ ++TI+ C ++D
Sbjct: 243 EYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIE---DCWDQD 299
Query: 390 QKAR-------PRMSEVV 400
+AR RM+E++
Sbjct: 300 AEARLTAQXAEERMAELM 317
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 75/154 (48%), Gaps = 7/154 (4%)
Query: 184 LIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLF-RRSLPLPWSIRMKIALDAAKGLA 242
L H N+VK G E + + L E+ G L + + +P P + R L A G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV 118
Query: 243 FLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAP 302
+LH + +RD K N+LLD N K+SDFGLA ++ + ++ GT Y AP
Sbjct: 119 YLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 303 EYVMTGHLTAK-SDVYSFGVVLLEMLTGRRSMDK 335
E + A+ DV+S G+VL ML G D+
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 97/235 (41%), Gaps = 39/235 (16%)
Query: 109 RKFSFNELKSATKSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKT-LNHDG 167
RKF+ ++ RP LG+G FG VY N K L V K+ L +G
Sbjct: 10 RKFTIDDFDIG----RP---LGKGKFGNVYLAREKQN-----KFIMALKVLFKSQLEKEG 57
Query: 168 LQGHKEWLAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPW 227
++ + E+ L HPN++++ + + L+ EF PRG L L +
Sbjct: 58 VE--HQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG----- 110
Query: 228 SIRMKIALDAAKGLAFLHEEA-------EKPVIYRDFKTSNILLDGEYNAKLSDFGLAKD 280
D + F+ E A E+ VI+RD K N+L+ + K++DFG +
Sbjct: 111 ------RFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVH 164
Query: 281 GPEGDKTHVSTRVM-GTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTGRRSMD 334
P + R M GT Y PE + K D++ GV+ E L G D
Sbjct: 165 APS-----LRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 97/235 (41%), Gaps = 39/235 (16%)
Query: 109 RKFSFNELKSATKSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKT-LNHDG 167
RKF+ ++ RP LG+G FG VY N K L V K+ L +G
Sbjct: 9 RKFTIDDFDIG----RP---LGKGKFGNVYLAREKQN-----KFIMALKVLFKSQLEKEG 56
Query: 168 LQGHKEWLAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPW 227
++ + E+ L HPN++++ + + L+ EF PRG L L +
Sbjct: 57 VE--HQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG----- 109
Query: 228 SIRMKIALDAAKGLAFLHEEA-------EKPVIYRDFKTSNILLDGEYNAKLSDFGLAKD 280
D + F+ E A E+ VI+RD K N+L+ + K++DFG +
Sbjct: 110 ------RFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVH 163
Query: 281 GPEGDKTHVSTRVM-GTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTGRRSMD 334
P + R M GT Y PE + K D++ GV+ E L G D
Sbjct: 164 APS-----LRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 70/151 (46%), Gaps = 18/151 (11%)
Query: 187 PNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPW----SIRMKIALDAAKGLA 242
P +V+L +D +V E+MP G L N + +P W + + +ALDA +
Sbjct: 129 PWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMG 188
Query: 243 FLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAP 302
F+H RD K N+LLD + KL+DFG + T V GT Y +P
Sbjct: 189 FIH---------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISP 238
Query: 303 EYVMT----GHLTAKSDVYSFGVVLLEMLTG 329
E + + G+ + D +S GV L EML G
Sbjct: 239 EVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 269
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 70/151 (46%), Gaps = 18/151 (11%)
Query: 187 PNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPW----SIRMKIALDAAKGLA 242
P +V+L +D +V E+MP G L N + +P W + + +ALDA +
Sbjct: 134 PWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMG 193
Query: 243 FLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAP 302
F+H RD K N+LLD + KL+DFG + T V GT Y +P
Sbjct: 194 FIH---------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISP 243
Query: 303 EYVMT----GHLTAKSDVYSFGVVLLEMLTG 329
E + + G+ + D +S GV L EML G
Sbjct: 244 EVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 70/151 (46%), Gaps = 18/151 (11%)
Query: 187 PNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPW----SIRMKIALDAAKGLA 242
P +V+L +D +V E+MP G L N + +P W + + +ALDA +
Sbjct: 134 PWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMG 193
Query: 243 FLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAP 302
F+H RD K N+LLD + KL+DFG + T V GT Y +P
Sbjct: 194 FIH---------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISP 243
Query: 303 EYVMT----GHLTAKSDVYSFGVVLLEMLTG 329
E + + G+ + D +S GV L EML G
Sbjct: 244 EVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 95/231 (41%), Gaps = 39/231 (16%)
Query: 123 FRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLG 182
F +LG+G FG V K ++ A+K + H + L+EV L
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRY---------YAIKKIRHTE-EKLSTILSEVMLLA 57
Query: 183 GLIHPNLVKLIGCCIE-------------DDQRLLVYEFMPRGSLENHLFRRSLPLPWSI 229
L H +V+ +E + E+ G+L + + +L
Sbjct: 58 SLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDE 117
Query: 230 RMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAK------DGPE 283
++ + L+++H + +I+RD K NI +D N K+ DFGLAK D +
Sbjct: 118 YWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILK 174
Query: 284 GDKTHV------STRVMGTYGYAAPEYVM-TGHLTAKSDVYSFGVVLLEML 327
D ++ T +GT Y A E + TGH K D+YS G++ EM+
Sbjct: 175 LDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 17/207 (8%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGH-KEWLAEVNYLGGLIHP 187
+GEG +G V + N+N VA+K ++ Q + + L E+ L H
Sbjct: 35 IGEGAYGMVCSAYDNLNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFRHE 85
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR--RSLPLPWSIRMKIALDAAKGLAFLH 245
N++ + + ++ + +E L++ ++ L +GL ++H
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 145
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDG-PEGDKTHVSTRVMGTYGYAAPEY 304
V++RD K SN+LL+ + K+ DFGLA+ P+ D T + T Y APE
Sbjct: 146 SAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEI 202
Query: 305 VMTGHLTAKS-DVYSFGVVLLEMLTGR 330
++ KS D++S G +L EML+ R
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 17/207 (8%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGH-KEWLAEVNYLGGLIHP 187
+GEG +G V + N+N VA+K ++ Q + + L E+ L H
Sbjct: 36 IGEGAYGMVCSAYDNLNKVR---------VAIKKISPFEHQTYCQRTLREIKILLRFRHE 86
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR--RSLPLPWSIRMKIALDAAKGLAFLH 245
N++ + + ++ + +E L++ ++ L +GL ++H
Sbjct: 87 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH 146
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDG-PEGDKTHVSTRVMGTYGYAAPEY 304
V++RD K SN+LL+ + K+ DFGLA+ P+ D T + T Y APE
Sbjct: 147 SAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEI 203
Query: 305 VMTGHLTAKS-DVYSFGVVLLEMLTGR 330
++ KS D++S G +L EML+ R
Sbjct: 204 MLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 92/181 (50%), Gaps = 17/181 (9%)
Query: 154 TGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGS 213
+G VAVK ++ Q + EV + H N+V++ + ++ ++ EF+ G+
Sbjct: 69 SGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGA 128
Query: 214 LENHLFRRSLPLPWSIRMKIALDAA-KGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKL 272
L + + + L ++ +A + LA+LH + VI+RD K+ +ILL + KL
Sbjct: 129 LTDIVSQVRLN---EEQIATVCEAVLQALAYLHAQG---VIHRDIKSDSILLTLDGRVKL 182
Query: 273 SDFG----LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
SDFG ++KD P+ ++GT + APE + + D++S G++++EM+
Sbjct: 183 SDFGFCAQISKDVPK------RKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVD 236
Query: 329 G 329
G
Sbjct: 237 G 237
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 100/208 (48%), Gaps = 22/208 (10%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHP 187
LG+GGF ++ I+ T V G +P ++ H ++ E++ L H
Sbjct: 46 FLGKGGFAKCFE--ISDADTKEVFAGKIVPKSLLLKPHQ----REKMSMEISIHRSLAHQ 99
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSL-ENHLFRRSLPLP---WSIRMKIALDAAKGLAF 243
++V G ++D +V E R SL E H R++L P + +R +I L G +
Sbjct: 100 HVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVL----GCQY 154
Query: 244 LHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLA-KDGPEGDKTHVSTRVMGTYGYAAP 302
LH VI+RD K N+ L+ + K+ DFGLA K +G++ V + GT Y AP
Sbjct: 155 LHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAP 208
Query: 303 EYVMTGHLTAKSDVYSFGVVLLEMLTGR 330
E + + + DV+S G ++ +L G+
Sbjct: 209 EVLSKKGHSFEVDVWSIGCIMYTLLVGK 236
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 100/208 (48%), Gaps = 22/208 (10%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHP 187
LG+GGF ++ I+ T V G +P ++ H ++ E++ L H
Sbjct: 48 FLGKGGFAKCFE--ISDADTKEVFAGKIVPKSLLLKPHQ----REKMSMEISIHRSLAHQ 101
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSL-ENHLFRRSLPLP---WSIRMKIALDAAKGLAF 243
++V G ++D +V E R SL E H R++L P + +R +I L G +
Sbjct: 102 HVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVL----GCQY 156
Query: 244 LHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLA-KDGPEGDKTHVSTRVMGTYGYAAP 302
LH VI+RD K N+ L+ + K+ DFGLA K +G++ V + GT Y AP
Sbjct: 157 LHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAP 210
Query: 303 EYVMTGHLTAKSDVYSFGVVLLEMLTGR 330
E + + + DV+S G ++ +L G+
Sbjct: 211 EVLSKKGHSFEVDVWSIGCIMYTLLVGK 238
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 108/228 (47%), Gaps = 40/228 (17%)
Query: 126 ECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLI 185
EC+ G+G +G V++G + G VAVK + + + W E ++
Sbjct: 14 ECV-GKGRYGEVWRGLWH-----------GESVAVKIFSS---RDEQSWFRETEIYNTVL 58
Query: 186 --HPNLVKLIGCCI----EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAK 239
H N++ I + Q L+ + GSL + L R++L P + +++A+ AA
Sbjct: 59 LRHDNILGFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLE-P-HLALRLAVSAAC 116
Query: 240 GLAFLHEEAE----KPVI-YRDFKTSNILLDGEYNAKLSDFGLAKDGPEG-DKTHVSTR- 292
GLA LH E KP I +RDFK+ N+L+ ++D GLA +G D +
Sbjct: 117 GLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNP 176
Query: 293 VMGTYGYAAPEYVMTGHLTAK-------SDVYSFGVVLLEMLTGRRSM 333
+GT Y APE V+ + +D+++FG+VL E+ RR++
Sbjct: 177 RVGTKRYMAPE-VLDEQIRTDCFESYKWTDIWAFGLVLWEI--ARRTI 221
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 74/146 (50%), Gaps = 9/146 (6%)
Query: 187 PNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHE 246
P LV L + + L+ +++ G L HL +R +++ + + L LH+
Sbjct: 119 PFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVG-EIVLALEHLHK 177
Query: 247 EAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM 306
+IYRD K NILLD + L+DFGL+K+ D+T + GT Y AP+ V
Sbjct: 178 LG---IIYRDIKLENILLDSNGHVVLTDFGLSKEFV-ADETERAYDFCGTIEYMAPDIVR 233
Query: 307 ---TGHLTAKSDVYSFGVVLLEMLTG 329
+GH A D +S GV++ E+LTG
Sbjct: 234 GGDSGHDKA-VDWWSLGVLMYELLTG 258
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 100/208 (48%), Gaps = 22/208 (10%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHP 187
LG+GGF ++ I+ T V G +P ++ H ++ E++ L H
Sbjct: 22 FLGKGGFAKCFE--ISDADTKEVFAGKIVPKSLLLKPHQ----REKMSMEISIHRSLAHQ 75
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSL-ENHLFRRSLPLP---WSIRMKIALDAAKGLAF 243
++V G ++D +V E R SL E H R++L P + +R +I L G +
Sbjct: 76 HVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVL----GCQY 130
Query: 244 LHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLA-KDGPEGDKTHVSTRVMGTYGYAAP 302
LH VI+RD K N+ L+ + K+ DFGLA K +G++ V + GT Y AP
Sbjct: 131 LHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPNYIAP 184
Query: 303 EYVMTGHLTAKSDVYSFGVVLLEMLTGR 330
E + + + DV+S G ++ +L G+
Sbjct: 185 EVLSKKGHSFEVDVWSIGCIMYTLLVGK 212
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 91/208 (43%), Gaps = 27/208 (12%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKP------GTGLPVAVKTLNHDGLQGHKEWLAEVNYLG 182
+GEG +G VYK N T +K G+P + E++ L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTT--------------IREISILK 55
Query: 183 GLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLA 242
L H N+VKL + +LV+E + + L+ L L L G+A
Sbjct: 56 ELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIA 114
Query: 243 FLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAP 302
+ H+ + V++RD K N+L++ E K++DFGLA+ G T + T Y AP
Sbjct: 115 YCHD---RRVLHRDLKPQNLLINREGELKIADFGLAR--AFGIPVRKYTHEIVTLWYRAP 169
Query: 303 EYVM-TGHLTAKSDVYSFGVVLLEMLTG 329
+ +M + + D++S G + EM+ G
Sbjct: 170 DVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 79/183 (43%), Gaps = 18/183 (9%)
Query: 224 PLPWSIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPE 283
P+ + + A+G+ FL + + I+RD NILL K+ DFGLA+D +
Sbjct: 195 PITMEDLISYSFQVARGMEFL---SSRKCIHRDLAARNILLSENNVVKICDFGLARDIYK 251
Query: 284 GDKTHVSTRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHN 343
+ APE + + KSDV+S+GV+L E+ + S P + +
Sbjct: 252 NPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGS---PYPGVQMD 308
Query: 344 LVEWARPQLGERRRFYRLIDPCLEGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEAL 403
+R + G R R P + Q+ C +RD K RPR +E+VE L
Sbjct: 309 EDFCSRLREGMRMRAPEYSTP------------EIYQIMLDCWHRDPKERPRFAELVEKL 356
Query: 404 KPL 406
L
Sbjct: 357 GDL 359
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 42/93 (45%), Gaps = 7/93 (7%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQG-HKEWLAEVNYLGGL-IH 186
LG G FG V + + K T VAVK L +K + E+ L + H
Sbjct: 35 LGRGAFGKV----VQASAFGIKKSPTCRTVAVKMLKEGATASEYKALMTELKILTHIGHH 90
Query: 187 PNLVKLIGCCIEDDQRLLV-YEFMPRGSLENHL 218
N+V L+G C + L+V E+ G+L N+L
Sbjct: 91 LNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYL 123
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 102/228 (44%), Gaps = 42/228 (18%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKE---WLAEVNYLGGLI 185
LG+G +G V+K ++ TG VAVK + D Q + E+ L L
Sbjct: 17 LGKGAYGIVWK---------SIDRRTGEVVAVKKI-FDAFQNSTDAQRTFREIMILTELS 66
Query: 186 -HPNLVKLIGCCIEDDQR--LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLA 242
H N+V L+ D+ R LV+++M + H R+ L + + K +
Sbjct: 67 GHENIVNLLNVLRADNDRDVYLVFDYM---ETDLHAVIRANILEPVHKQYVVYQLIKVIK 123
Query: 243 FLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAK-----------------DGPEG- 284
+LH +++RD K SNILL+ E + K++DFGL++ + E
Sbjct: 124 YLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENF 180
Query: 285 -DKTHVSTRVMGTYGYAAPEYVM-TGHLTAKSDVYSFGVVLLEMLTGR 330
D + T + T Y APE ++ + T D++S G +L E+L G+
Sbjct: 181 DDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 94/213 (44%), Gaps = 23/213 (10%)
Query: 123 FRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKE---WLAEVN 179
++ + +LG+G FG V TG AVK ++ ++ + L EV
Sbjct: 34 YKGQRVLGKGSFGEV---------ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQ 84
Query: 180 YLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAK 239
L L HPN++KL + LV E G L + + R +I
Sbjct: 85 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK-RFSEVDAARIIRQVLS 143
Query: 240 GLAFLHEEAEKPVIYRDFKTSNILLDG---EYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 296
G+ ++H+ +++RD K N+LL+ + N ++ DFGL+ K +GT
Sbjct: 144 GITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK---IGT 197
Query: 297 YGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
Y APE V+ G K DV+S GV+L +L+G
Sbjct: 198 AYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 229
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 91/208 (43%), Gaps = 27/208 (12%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKP------GTGLPVAVKTLNHDGLQGHKEWLAEVNYLG 182
+GEG +G VYK N T +K G+P + E++ L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTT--------------IREISILK 55
Query: 183 GLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLA 242
L H N+VKL + +LV+E + + L+ L L L G+A
Sbjct: 56 ELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIA 114
Query: 243 FLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAP 302
+ H+ + V++RD K N+L++ E K++DFGLA+ G T + T Y AP
Sbjct: 115 YCHD---RRVLHRDLKPQNLLINREGELKIADFGLAR--AFGIPVRKYTHEVVTLWYRAP 169
Query: 303 EYVM-TGHLTAKSDVYSFGVVLLEMLTG 329
+ +M + + D++S G + EM+ G
Sbjct: 170 DVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 91/208 (43%), Gaps = 27/208 (12%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKP------GTGLPVAVKTLNHDGLQGHKEWLAEVNYLG 182
+GEG +G VYK N T +K G+P + E++ L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTT--------------IREISILK 55
Query: 183 GLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLA 242
L H N+VKL + +LV+E + + L+ L L L G+A
Sbjct: 56 ELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIA 114
Query: 243 FLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAP 302
+ H+ + V++RD K N+L++ E K++DFGLA+ G T + T Y AP
Sbjct: 115 YCHD---RRVLHRDLKPQNLLINREGELKIADFGLAR--AFGIPVRKYTHEVVTLWYRAP 169
Query: 303 EYVM-TGHLTAKSDVYSFGVVLLEMLTG 329
+ +M + + D++S G + EM+ G
Sbjct: 170 DVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 95/230 (41%), Gaps = 35/230 (15%)
Query: 117 KSATKSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLA 176
K + + P+ ++G G V + V TG AVK + + E L
Sbjct: 90 KEFYQKYDPKDVIGRGVSSVVRR---------CVHRATGHEFAVKIMEVTAERLSPEQLE 140
Query: 177 EVN-----------YLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPL 225
EV + G HP+++ LI LV++ M +G L ++L + + L
Sbjct: 141 EVREATRRETHILRQVAG--HPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEK-VAL 197
Query: 226 PWSIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGD 285
I + ++FLH +++RD K NILLD +LSDFG + G+
Sbjct: 198 SEKETRSIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGE 254
Query: 286 KTHVSTRVMGTYGYAAPEYVMTGH------LTAKSDVYSFGVVLLEMLTG 329
K + GT GY APE + + D+++ GV+L +L G
Sbjct: 255 KLR---ELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAG 301
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 94/213 (44%), Gaps = 23/213 (10%)
Query: 123 FRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKE---WLAEVN 179
++ + +LG+G FG V TG AVK ++ ++ + L EV
Sbjct: 51 YKGQRVLGKGSFGEV---------ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQ 101
Query: 180 YLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAK 239
L L HPN++KL + LV E G L + + R +I
Sbjct: 102 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK-RFSEVDAARIIRQVLS 160
Query: 240 GLAFLHEEAEKPVIYRDFKTSNILLDG---EYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 296
G+ ++H+ +++RD K N+LL+ + N ++ DFGL+ K +GT
Sbjct: 161 GITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK---IGT 214
Query: 297 YGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
Y APE V+ G K DV+S GV+L +L+G
Sbjct: 215 AYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 246
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 94/213 (44%), Gaps = 23/213 (10%)
Query: 123 FRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKE---WLAEVN 179
++ + +LG+G FG V TG AVK ++ ++ + L EV
Sbjct: 52 YKGQRVLGKGSFGEV---------ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQ 102
Query: 180 YLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAK 239
L L HPN++KL + LV E G L + + R +I
Sbjct: 103 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK-RFSEVDAARIIRQVLS 161
Query: 240 GLAFLHEEAEKPVIYRDFKTSNILLDG---EYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 296
G+ ++H+ +++RD K N+LL+ + N ++ DFGL+ K +GT
Sbjct: 162 GITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK---IGT 215
Query: 297 YGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
Y APE V+ G K DV+S GV+L +L+G
Sbjct: 216 AYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 247
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 89/215 (41%), Gaps = 29/215 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQG--HKEWLAEVNYLGGLIH 186
+GEG FG G +K +N + +E EV L + H
Sbjct: 32 IGEGSFG---------KAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKH 82
Query: 187 PNLVKLIGCCIEDDQRLLVYEFMPRGSL-------ENHLFRRSLPLPWSIRMKIALDAAK 239
PN+V+ E+ +V ++ G L + LF+ L W +++ +AL
Sbjct: 83 PNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVH 142
Query: 240 GLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 299
++ +++RD K+ NI L + +L DFG+A+ ++ +GT Y
Sbjct: 143 ---------DRKILHRDIKSQNIFLTKDGTVQLGDFGIAR--VLNSTVELARACIGTPYY 191
Query: 300 AAPEYVMTGHLTAKSDVYSFGVVLLEMLTGRRSMD 334
+PE KSD+++ G VL E+ T + + +
Sbjct: 192 LSPEICENKPYNNKSDIWALGCVLYELCTLKHAFE 226
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 94/213 (44%), Gaps = 23/213 (10%)
Query: 123 FRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKE---WLAEVN 179
++ + +LG+G FG V TG AVK ++ ++ + L EV
Sbjct: 28 YKGQRVLGKGSFGEV---------ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQ 78
Query: 180 YLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAK 239
L L HPN++KL + LV E G L + + R +I
Sbjct: 79 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK-RFSEVDAARIIRQVLS 137
Query: 240 GLAFLHEEAEKPVIYRDFKTSNILLDG---EYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 296
G+ ++H+ +++RD K N+LL+ + N ++ DFGL+ K +GT
Sbjct: 138 GITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK---IGT 191
Query: 297 YGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
Y APE V+ G K DV+S GV+L +L+G
Sbjct: 192 AYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 71/153 (46%), Gaps = 4/153 (2%)
Query: 177 EVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALD 236
E + + L HP VKL C +D++ + G L ++ R+ + +
Sbjct: 87 ERDVMSRLDHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAE 145
Query: 237 AAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 296
L +LH K +I+RD K NILL+ + + +++DFG AK K + +GT
Sbjct: 146 IVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 202
Query: 297 YGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
Y +PE + SD+++ G ++ +++ G
Sbjct: 203 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 94/225 (41%), Gaps = 21/225 (9%)
Query: 110 KFSFNELKSATKSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQ 169
+F N + ++ + LG+G F V + V TGL A K +N L
Sbjct: 18 EFMMNASTKFSDNYDVKEELGKGAFSVVRR---------CVHKTTGLEFAAKIINTKKLS 68
Query: 170 GH--KEWLAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPW 227
++ E L HPN+V+L E+ LV++ + G L + R
Sbjct: 69 ARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEA 128
Query: 228 SIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYN---AKLSDFGLAKDGPEG 284
I + +A+ H +++R+ K N+LL + KL+DFGLA + +
Sbjct: 129 DASHCIQ-QILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 184
Query: 285 DKTHVSTRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
+ H GT GY +PE + + D+++ GV+L +L G
Sbjct: 185 EAWH---GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 91/209 (43%), Gaps = 22/209 (10%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEW---LAEVNYLGGLI 185
+G+G FG V K T A+K +N E E+ + GL
Sbjct: 23 IGKGSFGKV---------CIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLE 73
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLH 245
HP LV L +++ +V + + G L HL + ++++ I + L +L
Sbjct: 74 HPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFIC-ELVMALDYLQ 132
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV 305
+ +I+RD K NILLD + ++DF +A P +T ++T + GT Y APE
Sbjct: 133 NQR---IIHRDMKPDNILLDEHGHVHITDFNIAAMLPR--ETQITT-MAGTKPYMAPEMF 186
Query: 306 MT---GHLTAKSDVYSFGVVLLEMLTGRR 331
+ + D +S GV E+L GRR
Sbjct: 187 SSRKGAGYSFAVDWWSLGVTAYELLRGRR 215
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 99/211 (46%), Gaps = 28/211 (13%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHP 187
LG+GGF ++ I+ T V G +P ++ H ++ E++ L H
Sbjct: 24 FLGKGGFAKCFE--ISDADTKEVFAGKIVPKSLLLKPHQ----REKMSMEISIHRSLAHQ 77
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSL-ENHLFRRSLPLP---WSIRMKIALDAAKGLAF 243
++V G ++D +V E R SL E H R++L P + +R +I L G +
Sbjct: 78 HVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVL----GCQY 132
Query: 244 LHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAK----DGPEGDKTHVSTRVMGTYGY 299
LH VI+RD K N+ L+ + K+ DFGLA DG E KT + GT Y
Sbjct: 133 LHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG-ERKKT-----LCGTPNY 183
Query: 300 AAPEYVMTGHLTAKSDVYSFGVVLLEMLTGR 330
APE + + + DV+S G ++ +L G+
Sbjct: 184 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 214
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 99/211 (46%), Gaps = 28/211 (13%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHP 187
LG+GGF ++ I+ T V G +P ++ H ++ E++ L H
Sbjct: 28 FLGKGGFAKCFE--ISDADTKEVFAGKIVPKSLLLKPHQ----REKMSMEISIHRSLAHQ 81
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSL-ENHLFRRSLPLP---WSIRMKIALDAAKGLAF 243
++V G ++D +V E R SL E H R++L P + +R +I L G +
Sbjct: 82 HVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVL----GCQY 136
Query: 244 LHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAK----DGPEGDKTHVSTRVMGTYGY 299
LH VI+RD K N+ L+ + K+ DFGLA DG E KT + GT Y
Sbjct: 137 LHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG-ERKKT-----LCGTPNY 187
Query: 300 AAPEYVMTGHLTAKSDVYSFGVVLLEMLTGR 330
APE + + + DV+S G ++ +L G+
Sbjct: 188 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 218
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 99/211 (46%), Gaps = 28/211 (13%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHP 187
LG+GGF ++ I+ T V G +P ++ H ++ E++ L H
Sbjct: 24 FLGKGGFAKCFE--ISDADTKEVFAGKIVPKSLLLKPHQ----REKMSMEISIHRSLAHQ 77
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSL-ENHLFRRSLPLP---WSIRMKIALDAAKGLAF 243
++V G ++D +V E R SL E H R++L P + +R +I L G +
Sbjct: 78 HVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVL----GCQY 132
Query: 244 LHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAK----DGPEGDKTHVSTRVMGTYGY 299
LH VI+RD K N+ L+ + K+ DFGLA DG E KT + GT Y
Sbjct: 133 LHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG-ERKKT-----LCGTPNY 183
Query: 300 AAPEYVMTGHLTAKSDVYSFGVVLLEMLTGR 330
APE + + + DV+S G ++ +L G+
Sbjct: 184 IAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 214
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 85/203 (41%), Gaps = 17/203 (8%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG G FG V++ + TG A K + + E+ + L HP
Sbjct: 59 LGTGAFGVVHR---------VTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPT 109
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEEA 248
LV L +D++ +++YEFM G L + + ++ KGL +HE
Sbjct: 110 LVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN 169
Query: 249 EKPVIYRDFKTSNILLDGEYN--AKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM 306
++ D K NI+ + + KL DFGL V+T GT +AAPE
Sbjct: 170 ---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAE 223
Query: 307 TGHLTAKSDVYSFGVVLLEMLTG 329
+ +D++S GV+ +L+G
Sbjct: 224 GKPVGYYTDMWSVGVLSYILLSG 246
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 91/221 (41%), Gaps = 28/221 (12%)
Query: 114 NELKSATKSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKE 173
E+ AT R LG G FG V++ TG AVK + + +
Sbjct: 90 EEVHWATHQLR----LGRGSFGEVHR---------MEDKQTGFQCAVKKVRLEVFRAE-- 134
Query: 174 WLAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKI 233
E+ GL P +V L G E + E + GSL L + LP +
Sbjct: 135 ---ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSL-GQLVKEQGCLPEDRALYY 190
Query: 234 ALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGE-YNAKLSDFG----LAKDGPEGDKTH 288
A +GL +LH + +++ D K N+LL + +A L DFG L DG G
Sbjct: 191 LGQALEGLEYLHS---RRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDG-LGKSLL 246
Query: 289 VSTRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
+ GT + APE V+ AK DV+S ++L ML G
Sbjct: 247 TGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 287
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 94/231 (40%), Gaps = 39/231 (16%)
Query: 123 FRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLG 182
F +LG+G FG V K ++ A+K + H + L+EV L
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRY---------YAIKKIRHTE-EKLSTILSEVMLLA 57
Query: 183 GLIHPNLVKLIGCCIE-------------DDQRLLVYEFMPRGSLENHLFRRSLPLPWSI 229
L H +V+ +E + E+ +L + + +L
Sbjct: 58 SLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDE 117
Query: 230 RMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAK------DGPE 283
++ + L+++H + +I+RD K NI +D N K+ DFGLAK D +
Sbjct: 118 YWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILK 174
Query: 284 GDKTHV------STRVMGTYGYAAPEYVM-TGHLTAKSDVYSFGVVLLEML 327
D ++ T +GT Y A E + TGH K D+YS G++ EM+
Sbjct: 175 LDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 29/211 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNH--DGLQGHKEWLAEVNYLGGLIH 186
+G G +G V A TGL VAVK L+ + K E+ L + H
Sbjct: 30 VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 187 PNLVKLIGCCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
N++ L+ E + LV M G+ N++ + ++ I +G
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKXQKLTDDHVQFLI-YQILRG 137
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
L ++H +I+RD K SN+ ++ + K+ DFGLA+ + +V+TR Y
Sbjct: 138 LKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WYR 189
Query: 301 APEYVMTG-HLTAKSDVYSFGVVLLEMLTGR 330
APE ++ H D++S G ++ E+LTGR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 85/203 (41%), Gaps = 17/203 (8%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG G FG V++ + TG A K + + E+ + L HP
Sbjct: 165 LGTGAFGVVHR---------VTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPT 215
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEEA 248
LV L +D++ +++YEFM G L + + ++ KGL +HE
Sbjct: 216 LVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN 275
Query: 249 EKPVIYRDFKTSNILLDGEYN--AKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM 306
++ D K NI+ + + KL DFGL V+T GT +AAPE
Sbjct: 276 ---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAE 329
Query: 307 TGHLTAKSDVYSFGVVLLEMLTG 329
+ +D++S GV+ +L+G
Sbjct: 330 GKPVGYYTDMWSVGVLSYILLSG 352
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 100/221 (45%), Gaps = 31/221 (14%)
Query: 123 FRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLG 182
F+ E + G+G FG V G + TG+ VA+K + D ++E L + L
Sbjct: 25 FQVERMAGQGTFGTVQLGK---------EKSTGMSVAIKKVIQDPRFRNRE-LQIMQDLA 74
Query: 183 GLIHPNLVKLIGCCI---EDDQRLL----VYEFMP---RGSLENHLFRRSLPLPWSIRMK 232
L HPN+V+L E D+R + V E++P N+ R+ P P I++
Sbjct: 75 VLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKV- 133
Query: 233 IALDAAKGLAFLHEEAEKPVIYRDFKTSNILL-DGEYNAKLSDFGLAK--DGPEGDKTHV 289
+ + LH + V +RD K N+L+ + + KL DFG AK E + ++
Sbjct: 134 FLFQLIRSIGCLHLPSVN-VCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYI 192
Query: 290 STRVMGTYGYAAPEYVM-TGHLTAKSDVYSFGVVLLEMLTG 329
+R Y APE + H T D++S G + EM+ G
Sbjct: 193 CSRY-----YRAPELIFGNQHYTTAVDIWSVGCIFAEMMLG 228
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 92/222 (41%), Gaps = 30/222 (13%)
Query: 114 NELKSATKSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKE 173
E+ AT R LG G FG V++ TG AVK + + +
Sbjct: 71 EEVHWATHQLR----LGRGSFGEVHR---------MEDKQTGFQCAVKKVRLEVFRAE-- 115
Query: 174 WLAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKI 233
E+ GL P +V L G E + E + GSL L + LP +
Sbjct: 116 ---ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSL-GQLVKEQGCLPEDRALYY 171
Query: 234 ALDAAKGLAFLHEEAEKPVIYRDFKTSNILL--DGEYNAKLSDFG----LAKDGPEGDKT 287
A +GL +LH + +++ D K N+LL DG + A L DFG L DG G
Sbjct: 172 LGQALEGLEYLHS---RRILHGDVKADNVLLSSDGSH-AALCDFGHAVCLQPDG-LGKDL 226
Query: 288 HVSTRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
+ GT + APE V+ AK DV+S ++L ML G
Sbjct: 227 LTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 29/211 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNH--DGLQGHKEWLAEVNYLGGLIH 186
+G G +G V A TGL VAVK L+ + K E+ L + H
Sbjct: 30 VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 187 PNLVKLIGCCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
N++ L+ E + LV M G+ N++ + ++ I +G
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKXQKLTDDHVQFLI-YQILRG 137
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
L ++H +I+RD K SN+ ++ + K+ DFGLA+ + +V+TR Y
Sbjct: 138 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 189
Query: 301 APEYVMTG-HLTAKSDVYSFGVVLLEMLTGR 330
APE ++ H D++S G ++ E+LTGR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 29/211 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNH--DGLQGHKEWLAEVNYLGGLIH 186
+G G +G V A TGL VAVK L+ + K E+ L + H
Sbjct: 30 VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 187 PNLVKLIGCCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
N++ L+ E + LV M G+ N++ + ++ I +G
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQILRG 137
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
L ++H +I+RD K SN+ ++ + K+ DFGLA+ + +V+TR Y
Sbjct: 138 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 189
Query: 301 APEYVMTG-HLTAKSDVYSFGVVLLEMLTGR 330
APE ++ H D++S G ++ E+LTGR
Sbjct: 190 APEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 29/211 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNH--DGLQGHKEWLAEVNYLGGLIH 186
+G G +G V A TGL VAVK L+ + K E+ L + H
Sbjct: 35 IGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 85
Query: 187 PNLVKLIGCCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
N++ L+ E + LV M G+ N++ + ++ I +G
Sbjct: 86 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQILRG 142
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
L ++H +I+RD K SN+ ++ + K+ DFGLA+ + +V+TR Y
Sbjct: 143 LKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WYR 194
Query: 301 APEYVMTG-HLTAKSDVYSFGVVLLEMLTGR 330
APE ++ H D++S G ++ E+LTGR
Sbjct: 195 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 87/206 (42%), Gaps = 21/206 (10%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGH--KEWLAEVNYLGGLIH 186
LG+G F V + V TGL A K +N L ++ E L H
Sbjct: 13 LGKGAFSVVRR---------CVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 187 PNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHE 246
PN+V+L E+ LV++ + G L + R I + +A+ H
Sbjct: 64 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ-QILESIAYCHS 122
Query: 247 EAEKPVIYRDFKTSNILLDGEYN---AKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 303
+++R+ K N+LL + KL+DFGLA + + + H GT GY +PE
Sbjct: 123 NG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGTPGYLSPE 176
Query: 304 YVMTGHLTAKSDVYSFGVVLLEMLTG 329
+ + D+++ GV+L +L G
Sbjct: 177 VLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 92/213 (43%), Gaps = 23/213 (10%)
Query: 123 FRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKE---WLAEVN 179
++ + +LG+G FG V TG AVK ++ ++ + L EV
Sbjct: 28 YKGQRVLGKGSFGEV---------ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQ 78
Query: 180 YLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAK 239
L L HPN+ KL + LV E G L + + R +I
Sbjct: 79 LLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK-RFSEVDAARIIRQVLS 137
Query: 240 GLAFLHEEAEKPVIYRDFKTSNILLDG---EYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 296
G+ + H+ +++RD K N+LL+ + N ++ DFGL+ K +GT
Sbjct: 138 GITYXHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDK---IGT 191
Query: 297 YGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
Y APE V+ G K DV+S GV+L +L+G
Sbjct: 192 AYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 29/211 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNH--DGLQGHKEWLAEVNYLGGLIH 186
+G G +G V A TGL VAVK L+ + K E+ L + H
Sbjct: 41 VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 91
Query: 187 PNLVKLIGCCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
N++ L+ E + LV M G+ N++ + ++ I +G
Sbjct: 92 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQILRG 148
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
L ++H +I+RD K SN+ ++ + K+ DFGLA+ + +V+TR Y
Sbjct: 149 LKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WYR 200
Query: 301 APEYVMTG-HLTAKSDVYSFGVVLLEMLTGR 330
APE ++ H D++S G ++ E+LTGR
Sbjct: 201 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 87/206 (42%), Gaps = 21/206 (10%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGH--KEWLAEVNYLGGLIH 186
LG+G F V + V TGL A K +N L ++ E L H
Sbjct: 14 LGKGAFSVVRR---------CVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 187 PNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHE 246
PN+V+L E+ LV++ + G L + R I + +A+ H
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ-QILESIAYCHS 123
Query: 247 EAEKPVIYRDFKTSNILLDGEYN---AKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 303
+++R+ K N+LL + KL+DFGLA + + + H GT GY +PE
Sbjct: 124 NG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGTPGYLSPE 177
Query: 304 YVMTGHLTAKSDVYSFGVVLLEMLTG 329
+ + D+++ GV+L +L G
Sbjct: 178 VLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 78/162 (48%), Gaps = 14/162 (8%)
Query: 175 LAEVNYLGGLI-HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKI 233
L EV+ L + HPN+++L + LV++ M +G L ++L + + L KI
Sbjct: 58 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK-VTLSEKETRKI 116
Query: 234 ALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRV 293
+ + LH+ +++RD K NILLD + N KL+DFG + G+K V
Sbjct: 117 MRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR---EV 170
Query: 294 MGTYGYAAPEYVMTGH------LTAKSDVYSFGVVLLEMLTG 329
GT Y APE + + D++S GV++ +L G
Sbjct: 171 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 212
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 29/211 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNH--DGLQGHKEWLAEVNYLGGLIH 186
+G G +G V A TGL VAVK L+ + K E+ L + H
Sbjct: 35 VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 85
Query: 187 PNLVKLIGCCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
N++ L+ E + LV M G+ N++ + ++ I +G
Sbjct: 86 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQILRG 142
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
L ++H +I+RD K SN+ ++ + K+ DFGLA+ + +V+TR Y
Sbjct: 143 LKYIHS---ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WYR 194
Query: 301 APEYVMTG-HLTAKSDVYSFGVVLLEMLTGR 330
APE ++ H D++S G ++ E+LTGR
Sbjct: 195 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 87/206 (42%), Gaps = 22/206 (10%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTL--NHDGLQGHKEWLAEVNYLGGLIH 186
+GEG +G V+K TG VA+K + D K L E+ L L H
Sbjct: 11 IGEGSYGVVFK---------CRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKH 61
Query: 187 PNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHE 246
PNLV L+ + LV+E+ L + L R +P + I + + F H+
Sbjct: 62 PNLVNLLEVFRRKRRLHLVFEYCDHTVL-HELDRYQRGVPEHLVKSITWQTLQAVNFCHK 120
Query: 247 EAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAK--DGPEGDKTHVSTRVMGTYGYAAPEY 304
I+RD K NIL+ KL DFG A+ GP + + T Y +PE
Sbjct: 121 HN---CIHRDVKPENILITKHSVIKLCDFGFARLLTGP----SDYYDDEVATRWYRSPEL 173
Query: 305 VM-TGHLTAKSDVYSFGVVLLEMLTG 329
++ DV++ G V E+L+G
Sbjct: 174 LVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 87/206 (42%), Gaps = 21/206 (10%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGH--KEWLAEVNYLGGLIH 186
LG+G F V + V TGL A K +N L ++ E L H
Sbjct: 14 LGKGAFSVVRR---------CVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 187 PNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHE 246
PN+V+L E+ LV++ + G L + R I + +A+ H
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ-QILESIAYCHS 123
Query: 247 EAEKPVIYRDFKTSNILLDGEYN---AKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPE 303
+++R+ K N+LL + KL+DFGLA + + + H GT GY +PE
Sbjct: 124 NG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGTPGYLSPE 177
Query: 304 YVMTGHLTAKSDVYSFGVVLLEMLTG 329
+ + D+++ GV+L +L G
Sbjct: 178 VLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 78/162 (48%), Gaps = 14/162 (8%)
Query: 175 LAEVNYLGGLI-HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKI 233
L EV+ L + HPN+++L + LV++ M +G L ++L + + L KI
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK-VTLSEKETRKI 129
Query: 234 ALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRV 293
+ + LH+ +++RD K NILLD + N KL+DFG + G+K V
Sbjct: 130 MRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR---EV 183
Query: 294 MGTYGYAAPEYVMTGH------LTAKSDVYSFGVVLLEMLTG 329
GT Y APE + + D++S GV++ +L G
Sbjct: 184 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 29/211 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNH--DGLQGHKEWLAEVNYLGGLIH 186
+G G +G V A TGL VAVK L+ + K E+ L + H
Sbjct: 37 VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 87
Query: 187 PNLVKLIGCCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
N++ L+ E + LV M G+ N++ + ++ I +G
Sbjct: 88 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQILRG 144
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
L ++H +I+RD K SN+ ++ + K+ DFGLA+ + +V+TR Y
Sbjct: 145 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----WYR 196
Query: 301 APEYVMTG-HLTAKSDVYSFGVVLLEMLTGR 330
APE ++ H D++S G ++ E+LTGR
Sbjct: 197 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 29/211 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNH--DGLQGHKEWLAEVNYLGGLIH 186
+G G +G V A TGL VAVK L+ + K E+ L + H
Sbjct: 37 VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 87
Query: 187 PNLVKLIGCCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
N++ L+ E + LV M G+ N++ + ++ I +G
Sbjct: 88 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQILRG 144
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
L ++H +I+RD K SN+ ++ + K+ DFGLA+ + +V+TR Y
Sbjct: 145 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----WYR 196
Query: 301 APEYVMTG-HLTAKSDVYSFGVVLLEMLTGR 330
APE ++ H D++S G ++ E+LTGR
Sbjct: 197 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 29/211 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNH--DGLQGHKEWLAEVNYLGGLIH 186
+G G +G V A TGL VAVK L+ + K E+ L + H
Sbjct: 42 VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 92
Query: 187 PNLVKLIGCCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
N++ L+ E + LV M G+ N++ + ++ I +G
Sbjct: 93 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQILRG 149
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
L ++H +I+RD K SN+ ++ + K+ DFGLA+ + +V+TR Y
Sbjct: 150 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 201
Query: 301 APEYVMTG-HLTAKSDVYSFGVVLLEMLTGR 330
APE ++ H D++S G ++ E+LTGR
Sbjct: 202 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 29/211 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNH--DGLQGHKEWLAEVNYLGGLIH 186
+G G +G V A TGL VAVK L+ + K E+ L + H
Sbjct: 42 VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 92
Query: 187 PNLVKLIGCCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
N++ L+ E + LV M G+ N++ + ++ I +G
Sbjct: 93 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQILRG 149
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
L ++H +I+RD K SN+ ++ + K+ DFGLA+ + +V+TR Y
Sbjct: 150 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 201
Query: 301 APEYVMTG-HLTAKSDVYSFGVVLLEMLTGR 330
APE ++ H D++S G ++ E+LTGR
Sbjct: 202 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 78/162 (48%), Gaps = 14/162 (8%)
Query: 175 LAEVNYLGGLI-HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKI 233
L EV+ L + HPN+++L + LV++ M +G L ++L + + L KI
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK-VTLSEKETRKI 129
Query: 234 ALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRV 293
+ + LH+ +++RD K NILLD + N KL+DFG + G+K V
Sbjct: 130 MRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR---SV 183
Query: 294 MGTYGYAAPEYVMTGH------LTAKSDVYSFGVVLLEMLTG 329
GT Y APE + + D++S GV++ +L G
Sbjct: 184 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 87/204 (42%), Gaps = 20/204 (9%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGH---KEWLAEVNYLGGLI 185
LG+G FG VY + + VA+K L ++ + E+ L
Sbjct: 31 LGKGKFGNVY---------LAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLH 81
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLH 245
HPN+++L + + L+ E+ PRG L L ++S I + A L + H
Sbjct: 82 HPNILRLYNYFYDRRRIYLILEYAPRGELYKEL-QKSCTFDEQRTATIMEELADALMYCH 140
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV 305
K VI+RD K N+LL + K++DFG + P + + GT Y PE +
Sbjct: 141 G---KKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRR----KTMCGTLDYLPPEMI 193
Query: 306 MTGHLTAKSDVYSFGVVLLEMLTG 329
K D++ GV+ E+L G
Sbjct: 194 EGRMHNEKVDLWCIGVLCYELLVG 217
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 29/211 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNH--DGLQGHKEWLAEVNYLGGLIH 186
+G G +G V A TGL VAVK L+ + K E+ L + H
Sbjct: 32 VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 82
Query: 187 PNLVKLIGCCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
N++ L+ E + LV M G+ N++ + ++ I +G
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQILRG 139
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
L ++H +I+RD K SN+ ++ + K+ DFGLA+ + +V+TR Y
Sbjct: 140 LKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR-----WYR 191
Query: 301 APEYVMTG-HLTAKSDVYSFGVVLLEMLTGR 330
APE ++ H D++S G ++ E+LTGR
Sbjct: 192 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 29/211 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNH--DGLQGHKEWLAEVNYLGGLIH 186
+G G +G V A TGL VAVK L+ + K E+ L + H
Sbjct: 37 VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 87
Query: 187 PNLVKLIGCCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
N++ L+ E + LV M G+ N++ + ++ I +G
Sbjct: 88 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQILRG 144
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
L ++H +I+RD K SN+ ++ + K+ DFGLA+ + +V+TR Y
Sbjct: 145 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----WYR 196
Query: 301 APEYVMTG-HLTAKSDVYSFGVVLLEMLTGR 330
APE ++ H D++S G ++ E+LTGR
Sbjct: 197 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 29/211 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNH--DGLQGHKEWLAEVNYLGGLIH 186
+G G +G V A TGL VAVK L+ + K E+ L + H
Sbjct: 30 VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 187 PNLVKLIGCCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
N++ L+ E + LV M G+ N++ + ++ I +G
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQILRG 137
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
L ++H +I+RD K SN+ ++ + K+ DFGLA+ + +V+TR Y
Sbjct: 138 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 189
Query: 301 APEYVMTG-HLTAKSDVYSFGVVLLEMLTGR 330
APE ++ H D++S G ++ E+LTGR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 29/211 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNH--DGLQGHKEWLAEVNYLGGLIH 186
+G G +G V A TGL VAVK L+ + K E+ L + H
Sbjct: 30 VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 187 PNLVKLIGCCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
N++ L+ E + LV M G+ N++ + ++ I +G
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQILRG 137
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
L ++H +I+RD K SN+ ++ + K+ DFGLA+ + +V+TR Y
Sbjct: 138 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 189
Query: 301 APEYVMTG-HLTAKSDVYSFGVVLLEMLTGR 330
APE ++ H D++S G ++ E+LTGR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 29/211 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNH--DGLQGHKEWLAEVNYLGGLIH 186
+G G +G V A TGL VAVK L+ + K E+ L + H
Sbjct: 30 VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 187 PNLVKLIGCCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
N++ L+ E + LV M G+ N++ + ++ I +G
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQILRG 137
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
L ++H +I+RD K SN+ ++ + K+ DFGLA+ + +V+TR Y
Sbjct: 138 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 189
Query: 301 APEYVMTG-HLTAKSDVYSFGVVLLEMLTGR 330
APE ++ H D++S G ++ E+LTGR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 29/211 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNH--DGLQGHKEWLAEVNYLGGLIH 186
+G G +G V A TGL VAVK L+ + K E+ L + H
Sbjct: 41 VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 91
Query: 187 PNLVKLIGCCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
N++ L+ E + LV M G+ N++ + ++ I +G
Sbjct: 92 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQILRG 148
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
L ++H +I+RD K SN+ ++ + K+ DFGLA+ + +V+TR Y
Sbjct: 149 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 200
Query: 301 APEYVMTG-HLTAKSDVYSFGVVLLEMLTGR 330
APE ++ H D++S G ++ E+LTGR
Sbjct: 201 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 29/211 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNH--DGLQGHKEWLAEVNYLGGLIH 186
+G G +G V A TGL VAVK L+ + K E+ L + H
Sbjct: 32 VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 82
Query: 187 PNLVKLIGCCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
N++ L+ E + LV M G+ N++ + ++ I +G
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQILRG 139
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
L ++H +I+RD K SN+ ++ + K+ DFGLA+ + +V+TR Y
Sbjct: 140 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 191
Query: 301 APEYVMTG-HLTAKSDVYSFGVVLLEMLTGR 330
APE ++ H D++S G ++ E+LTGR
Sbjct: 192 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 29/211 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNH--DGLQGHKEWLAEVNYLGGLIH 186
+G G +G V A TGL VAVK L+ + K E+ L + H
Sbjct: 53 VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 103
Query: 187 PNLVKLIGCCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
N++ L+ E + LV M G+ N++ + ++ I +G
Sbjct: 104 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQILRG 160
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
L ++H +I+RD K SN+ ++ + K+ DFGLA+ + +V+TR Y
Sbjct: 161 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATR-----WYR 212
Query: 301 APEYVMTG-HLTAKSDVYSFGVVLLEMLTGR 330
APE ++ H D++S G ++ E+LTGR
Sbjct: 213 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 29/211 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNH--DGLQGHKEWLAEVNYLGGLIH 186
+G G +G V A TGL VAVK L+ + K E+ L + H
Sbjct: 32 VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 82
Query: 187 PNLVKLIGCCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
N++ L+ E + LV M G+ N++ + ++ I +G
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQILRG 139
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
L ++H +I+RD K SN+ ++ + K+ DFGLA+ + +V+TR Y
Sbjct: 140 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 191
Query: 301 APEYVMTG-HLTAKSDVYSFGVVLLEMLTGR 330
APE ++ H D++S G ++ E+LTGR
Sbjct: 192 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 29/211 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNH--DGLQGHKEWLAEVNYLGGLIH 186
+G G +G V A TGL VAVK L+ + K E+ L + H
Sbjct: 35 VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 85
Query: 187 PNLVKLIGCCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
N++ L+ E + LV M G+ N++ + ++ I +G
Sbjct: 86 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQILRG 142
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
L ++H +I+RD K SN+ ++ + K+ DFGLA+ + +V+TR Y
Sbjct: 143 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 194
Query: 301 APEYVMTG-HLTAKSDVYSFGVVLLEMLTGR 330
APE ++ H D++S G ++ E+LTGR
Sbjct: 195 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 29/211 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNH--DGLQGHKEWLAEVNYLGGLIH 186
+G G +G V A TGL VAVK L+ + K E+ L + H
Sbjct: 36 VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 86
Query: 187 PNLVKLIGCCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
N++ L+ E + LV M G+ N++ + ++ I +G
Sbjct: 87 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQILRG 143
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
L ++H +I+RD K SN+ ++ + K+ DFGLA+ + +V+TR Y
Sbjct: 144 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 195
Query: 301 APEYVMTG-HLTAKSDVYSFGVVLLEMLTGR 330
APE ++ H D++S G ++ E+LTGR
Sbjct: 196 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 29/211 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNH--DGLQGHKEWLAEVNYLGGLIH 186
+G G +G V A TGL VAVK L+ + K E+ L + H
Sbjct: 29 VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 79
Query: 187 PNLVKLIGCCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
N++ L+ E + LV M G+ N++ + ++ I +G
Sbjct: 80 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQILRG 136
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
L ++H +I+RD K SN+ ++ + K+ DFGLA+ + +V+TR Y
Sbjct: 137 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 188
Query: 301 APEYVMTG-HLTAKSDVYSFGVVLLEMLTGR 330
APE ++ H D++S G ++ E+LTGR
Sbjct: 189 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 29/211 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNH--DGLQGHKEWLAEVNYLGGLIH 186
+G G +G V A TGL VAVK L+ + K E+ L + H
Sbjct: 36 VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 86
Query: 187 PNLVKLIGCCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
N++ L+ E + LV M G+ N++ + ++ I +G
Sbjct: 87 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQILRG 143
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
L ++H +I+RD K SN+ ++ + K+ DFGLA+ + +V+TR Y
Sbjct: 144 LKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR-----WYR 195
Query: 301 APEYVMTG-HLTAKSDVYSFGVVLLEMLTGR 330
APE ++ H D++S G ++ E+LTGR
Sbjct: 196 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 29/211 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNH--DGLQGHKEWLAEVNYLGGLIH 186
+G G +G V A TGL VAVK L+ + K E+ L + H
Sbjct: 49 VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 99
Query: 187 PNLVKLIGCCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
N++ L+ E + LV M G+ N++ + ++ I +G
Sbjct: 100 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQILRG 156
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
L ++H +I+RD K SN+ ++ + K+ DFGLA+ + +V+TR Y
Sbjct: 157 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 208
Query: 301 APEYVMTG-HLTAKSDVYSFGVVLLEMLTGR 330
APE ++ H D++S G ++ E+LTGR
Sbjct: 209 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 29/211 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLN--HDGLQGHKEWLAEVNYLGGLIH 186
+G G +G V A TGL VAVK L+ + K E+ L + H
Sbjct: 42 VGSGAYGSV---------CAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKH 92
Query: 187 PNLVKLIGCCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
N++ L+ E + LV M G+ N++ + ++ I +G
Sbjct: 93 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQILRG 149
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
L ++H +I+RD K SN+ ++ + K+ DFGLA+ + +V+TR Y
Sbjct: 150 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 201
Query: 301 APEYVMTG-HLTAKSDVYSFGVVLLEMLTGR 330
APE ++ H D++S G ++ E+LTGR
Sbjct: 202 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 93/204 (45%), Gaps = 17/204 (8%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHK-EWLAEVNYLGGLIHP 187
LGEG + VYKG + VA+K + + +G + EV+ L L H
Sbjct: 10 LGEGTYATVYKGKSKLTDNL---------VALKEIRLEHEEGAPCTAIREVSLLKDLKHA 60
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEE 247
N+V L + LV+E++ + L+ +L + +GLA+ H +
Sbjct: 61 NIVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ 119
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM- 306
V++RD K N+L++ KL+DFGLA+ KT+ + V T Y P+ ++
Sbjct: 120 K---VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV--TLWYRPPDILLG 174
Query: 307 TGHLTAKSDVYSFGVVLLEMLTGR 330
+ + + D++ G + EM TGR
Sbjct: 175 STDYSTQIDMWGVGCIFYEMATGR 198
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 29/211 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNH--DGLQGHKEWLAEVNYLGGLIH 186
+G G +G V A TGL VAVK L+ + K E+ L + H
Sbjct: 30 VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 187 PNLVKLIGCCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
N++ L+ E + LV M G+ N++ + ++ I +G
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQILRG 137
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
L ++H +I+RD K SN+ ++ + K+ DFGLA+ + +V+TR Y
Sbjct: 138 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 189
Query: 301 APEYVMTG-HLTAKSDVYSFGVVLLEMLTGR 330
APE ++ H D++S G ++ E+LTGR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 29/211 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNH--DGLQGHKEWLAEVNYLGGLIH 186
+G G +G V A TGL VAVK L+ + K E+ L + H
Sbjct: 32 VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 82
Query: 187 PNLVKLIGCCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
N++ L+ E + LV M G+ N++ + ++ I +G
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQILRG 139
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
L ++H +I+RD K SN+ ++ + K+ DFGLA+ + +V+TR Y
Sbjct: 140 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 191
Query: 301 APEYVMTG-HLTAKSDVYSFGVVLLEMLTGR 330
APE ++ H D++S G ++ E+LTGR
Sbjct: 192 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 29/211 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNH--DGLQGHKEWLAEVNYLGGLIH 186
+G G +G V A TGL VAVK L+ + K E+ L + H
Sbjct: 37 VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 87
Query: 187 PNLVKLIGCCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
N++ L+ E + LV M G+ N++ + ++ I +G
Sbjct: 88 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQILRG 144
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
L ++H +I+RD K SN+ ++ + K+ DFGLA+ + +V+TR Y
Sbjct: 145 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 196
Query: 301 APEYVMTG-HLTAKSDVYSFGVVLLEMLTGR 330
APE ++ H D++S G ++ E+LTGR
Sbjct: 197 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 29/211 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNH--DGLQGHKEWLAEVNYLGGLIH 186
+G G +G V A TGL VAVK L+ + K E+ L + H
Sbjct: 30 VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 187 PNLVKLIGCCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
N++ L+ E + LV M G+ N++ + ++ I +G
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQILRG 137
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
L ++H +I+RD K SN+ ++ + K+ DFGLA+ + +V+TR Y
Sbjct: 138 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 189
Query: 301 APEYVMTG-HLTAKSDVYSFGVVLLEMLTGR 330
APE ++ H D++S G ++ E+LTGR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 29/211 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNH--DGLQGHKEWLAEVNYLGGLIH 186
+G G +G V A TGL VAVK L+ + K E+ L + H
Sbjct: 30 VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 187 PNLVKLIGCCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
N++ L+ E + LV M G+ N++ + ++ I +G
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQILRG 137
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
L ++H +I+RD K SN+ ++ + K+ DFGLA+ + +V+TR Y
Sbjct: 138 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 189
Query: 301 APEYVMTG-HLTAKSDVYSFGVVLLEMLTGR 330
APE ++ H D++S G ++ E+LTGR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 29/211 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNH--DGLQGHKEWLAEVNYLGGLIH 186
+G G +G V A TGL VAVK L+ + K E+ L + H
Sbjct: 50 VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 100
Query: 187 PNLVKLIGCCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
N++ L+ E + LV M G+ N++ + ++ I +G
Sbjct: 101 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQILRG 157
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
L ++H +I+RD K SN+ ++ + K+ DFGLA+ + +V+TR Y
Sbjct: 158 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 209
Query: 301 APEYVMTG-HLTAKSDVYSFGVVLLEMLTGR 330
APE ++ H D++S G ++ E+LTGR
Sbjct: 210 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 29/211 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNH--DGLQGHKEWLAEVNYLGGLIH 186
+G G +G V A TGL VAVK L+ + K E+ L + H
Sbjct: 53 VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 103
Query: 187 PNLVKLIGCCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
N++ L+ E + LV M G+ N++ + ++ I +G
Sbjct: 104 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQILRG 160
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
L ++H +I+RD K SN+ ++ + K+ DFGLA+ + +V+TR Y
Sbjct: 161 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 212
Query: 301 APEYVMTG-HLTAKSDVYSFGVVLLEMLTGR 330
APE ++ H D++S G ++ E+LTGR
Sbjct: 213 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 29/211 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNH--DGLQGHKEWLAEVNYLGGLIH 186
+G G +G V A TGL VAVK L+ + K E+ L + H
Sbjct: 27 VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 77
Query: 187 PNLVKLIGCCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
N++ L+ E + LV M G+ N++ + ++ I +G
Sbjct: 78 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQILRG 134
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
L ++H +I+RD K SN+ ++ + K+ DFGLA+ + +V+TR Y
Sbjct: 135 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 186
Query: 301 APEYVMTG-HLTAKSDVYSFGVVLLEMLTGR 330
APE ++ H D++S G ++ E+LTGR
Sbjct: 187 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 29/211 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNH--DGLQGHKEWLAEVNYLGGLIH 186
+G G +G V A TGL VAVK L+ + K E+ L + H
Sbjct: 30 VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 187 PNLVKLIGCCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
N++ L+ E + LV M G+ N++ + ++ I +G
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQILRG 137
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
L ++H +I+RD K SN+ ++ + K+ DFGLA+ + +V+TR Y
Sbjct: 138 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 189
Query: 301 APEYVMTG-HLTAKSDVYSFGVVLLEMLTGR 330
APE ++ H D++S G ++ E+LTGR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 29/211 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNH--DGLQGHKEWLAEVNYLGGLIH 186
+G G +G V A TGL VAVK L+ + K E+ L + H
Sbjct: 27 VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 77
Query: 187 PNLVKLIGCCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
N++ L+ E + LV M G+ N++ + ++ I +G
Sbjct: 78 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQILRG 134
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
L ++H +I+RD K SN+ ++ + K+ DFGLA+ + +V+TR Y
Sbjct: 135 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 186
Query: 301 APEYVMTG-HLTAKSDVYSFGVVLLEMLTGR 330
APE ++ H D++S G ++ E+LTGR
Sbjct: 187 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 29/211 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNH--DGLQGHKEWLAEVNYLGGLIH 186
+G G +G V A TGL VAVK L+ + K E+ L + H
Sbjct: 28 VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 78
Query: 187 PNLVKLIGCCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
N++ L+ E + LV M G+ N++ + ++ I +G
Sbjct: 79 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQILRG 135
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
L ++H +I+RD K SN+ ++ + K+ DFGLA+ + +V+TR Y
Sbjct: 136 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 187
Query: 301 APEYVMTG-HLTAKSDVYSFGVVLLEMLTGR 330
APE ++ H D++S G ++ E+LTGR
Sbjct: 188 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 29/211 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNH--DGLQGHKEWLAEVNYLGGLIH 186
+G G +G V A TGL VAVK L+ + K E+ L + H
Sbjct: 36 VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 86
Query: 187 PNLVKLIGCCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
N++ L+ E + LV M G+ N++ + ++ I +G
Sbjct: 87 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQILRG 143
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
L ++H +I+RD K SN+ ++ + K+ DFGLA+ + +V+TR Y
Sbjct: 144 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 195
Query: 301 APEYVMTG-HLTAKSDVYSFGVVLLEMLTGR 330
APE ++ H D++S G ++ E+LTGR
Sbjct: 196 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 29/211 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNH--DGLQGHKEWLAEVNYLGGLIH 186
+G G +G V A TGL VAVK L+ + K E+ L + H
Sbjct: 26 VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 76
Query: 187 PNLVKLIGCCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
N++ L+ E + LV M G+ N++ + ++ I +G
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQILRG 133
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
L ++H +I+RD K SN+ ++ + K+ DFGLA+ + +V+TR Y
Sbjct: 134 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 185
Query: 301 APEYVMTG-HLTAKSDVYSFGVVLLEMLTGR 330
APE ++ H D++S G ++ E+LTGR
Sbjct: 186 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 29/211 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNH--DGLQGHKEWLAEVNYLGGLIH 186
+G G +G V A TGL VAVK L+ + K E+ L + H
Sbjct: 35 VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 85
Query: 187 PNLVKLIGCCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
N++ L+ E + LV M G+ N++ + ++ I +G
Sbjct: 86 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQILRG 142
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
L ++H +I+RD K SN+ ++ + K+ DFGLA+ + +V+TR Y
Sbjct: 143 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 194
Query: 301 APEYVMTG-HLTAKSDVYSFGVVLLEMLTGR 330
APE ++ H D++S G ++ E+LTGR
Sbjct: 195 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 100/226 (44%), Gaps = 30/226 (13%)
Query: 120 TKSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLN-HDGLQGHKEWLAEV 178
+ F+ + LLGEG +G V +AT KP TG VA+K + D L E+
Sbjct: 10 SSDFQLKSLLGEGAYGVV--------CSATHKP-TGEIVAIKKIEPFDKPLFALRTLREI 60
Query: 179 NYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAA 238
L H N++ + QR +E + L + L S +M ++ D
Sbjct: 61 KILKHFKHENIITIFNI-----QRPDSFENFNEVYIIQELMQTDLHRVISTQM-LSDDHI 114
Query: 239 KGLAFLHEEAEKP-----VIYRDFKTSNILLDGEYNAKLSDFGLAK--DGPEGDKTHVS- 290
+ + A K VI+RD K SN+L++ + K+ DFGLA+ D D + +
Sbjct: 115 QYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTG 174
Query: 291 -----TRVMGTYGYAAPEYVMTGHLTAKS-DVYSFGVVLLEMLTGR 330
T + T Y APE ++T +++ DV+S G +L E+ R
Sbjct: 175 QQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 93/211 (44%), Gaps = 29/211 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNH--DGLQGHKEWLAEVNYLGGLIH 186
+G G +G V A TGL VAVK L+ + K E+ L + H
Sbjct: 30 VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 187 PNLVKLIGCCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
N++ L+ E + LV M G+ N++ + ++ I +G
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKSQKLTDDHVQFLI-YQILRG 137
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
L ++H +I+RD K SN+ ++ + K+ DFGL + + +V+TR Y
Sbjct: 138 LKYIHS---ADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATR-----WYR 189
Query: 301 APEYVMTG-HLTAKSDVYSFGVVLLEMLTGR 330
APE ++ H D++S G ++ E+LTGR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 100/226 (44%), Gaps = 30/226 (13%)
Query: 120 TKSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLN-HDGLQGHKEWLAEV 178
+ F+ + LLGEG +G V +AT KP TG VA+K + D L E+
Sbjct: 10 SSDFQLKSLLGEGAYGVV--------CSATHKP-TGEIVAIKKIEPFDKPLFALRTLREI 60
Query: 179 NYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAA 238
L H N++ + QR +E + L + L S +M ++ D
Sbjct: 61 KILKHFKHENIITIFNI-----QRPDSFENFNEVYIIQELMQTDLHRVISTQM-LSDDHI 114
Query: 239 KGLAFLHEEAEKP-----VIYRDFKTSNILLDGEYNAKLSDFGLAK--DGPEGDKTHVS- 290
+ + A K VI+RD K SN+L++ + K+ DFGLA+ D D + +
Sbjct: 115 QYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTG 174
Query: 291 -----TRVMGTYGYAAPEYVMTGHLTAKS-DVYSFGVVLLEMLTGR 330
T + T Y APE ++T +++ DV+S G +L E+ R
Sbjct: 175 QQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 83/185 (44%), Gaps = 24/185 (12%)
Query: 154 TGLPVAVKTLNHDGLQGHKEW---LAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMP 210
TG A+K L+ + K+ L E L + P LVKL ++ +V E+MP
Sbjct: 65 TGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMP 124
Query: 211 RGSLENHLFR---RSLPLPWSIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGE 267
G + +HL R S P +I L +LH +IYRD K N+L+D +
Sbjct: 125 GGDMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLHS---LDLIYRDLKPENLLIDQQ 177
Query: 268 YNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLL 324
K++DFG AK V R + GT Y APE +++ D ++ GV++
Sbjct: 178 GYIKVADFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 325 EMLTG 329
EM G
Sbjct: 230 EMAAG 234
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 83/185 (44%), Gaps = 24/185 (12%)
Query: 154 TGLPVAVKTLNHDGLQGHKEW---LAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMP 210
TG A+K L+ + K+ L E L + P LVKL ++ +V E+MP
Sbjct: 65 TGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMP 124
Query: 211 RGSLENHLFR---RSLPLPWSIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGE 267
G + +HL R S P +I L +LH +IYRD K N+L+D +
Sbjct: 125 GGDMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLHS---LDLIYRDLKPENLLIDQQ 177
Query: 268 YNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLL 324
K++DFG AK V R + GT Y APE +++ D ++ GV++
Sbjct: 178 GYIKVADFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 325 EMLTG 329
EM G
Sbjct: 230 EMAAG 234
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 90/203 (44%), Gaps = 17/203 (8%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG G FG V++ V+ TG K +N E++ + L HP
Sbjct: 59 LGSGAFGVVHR---------CVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPK 109
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEEA 248
L+ L + + +L+ EF+ G L + + + + + A +GL +HE +
Sbjct: 110 LINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHS 169
Query: 249 EKPVIYRDFKTSNILLDGEY--NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM 306
+++ D K NI+ + + + K+ DFGLA + V+T T +AAPE V
Sbjct: 170 ---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTT---ATAEFAAPEIVD 223
Query: 307 TGHLTAKSDVYSFGVVLLEMLTG 329
+ +D+++ GV+ +L+G
Sbjct: 224 REPVGFYTDMWAIGVLGYVLLSG 246
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 93/211 (44%), Gaps = 29/211 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNH--DGLQGHKEWLAEVNYLGGLIH 186
+G G +G V A TGL VAVK L+ + K E+ L + H
Sbjct: 30 VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 187 PNLVKLIGCCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
N++ L+ E + LV M G+ N++ + ++ I +G
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQILRG 137
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
L ++H +I+RD K SN+ ++ + K+ DFGLA+ + V+TR Y
Sbjct: 138 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXVATR-----WYR 189
Query: 301 APEYVMTG-HLTAKSDVYSFGVVLLEMLTGR 330
APE ++ H D++S G ++ E+LTGR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 91/215 (42%), Gaps = 24/215 (11%)
Query: 121 KSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLA-EVN 179
K F + LG G F V + TG AVK + L+G + + E+
Sbjct: 22 KIFEFKETLGTGAFSEV---------VLAEEKATGKLFAVKCIPKKALKGKESSIENEIA 72
Query: 180 YLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSL--PLPWSIRMKIALDA 237
L + H N+V L + LV + + G L + + + S ++ LDA
Sbjct: 73 VLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDA 132
Query: 238 AKGLAFLHEEAEKPVIYRDFKTSNILL---DGEYNAKLSDFGLAKDGPEGDKTHVSTRVM 294
+ +LH +++RD K N+L D E +SDFGL+K +GD V +
Sbjct: 133 ---VYYLHRMG---IVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGD---VMSTAC 183
Query: 295 GTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
GT GY APE + + D +S GV+ +L G
Sbjct: 184 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 218
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 89/210 (42%), Gaps = 33/210 (15%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEW---LAEVNYLGGLI 185
LG G FG V TG A+K L+ + KE L E L +
Sbjct: 49 LGTGSFGRV---------MLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN 99
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKIALDAAKGLA 242
P LVKL ++ +V E+ P G + +HL R S P +I L
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFE 155
Query: 243 FLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGY 299
+LH +IYRD K N+++D + K++DFGLAK V R + GT Y
Sbjct: 156 YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGLAK--------RVKGRTWXLCGTPEY 204
Query: 300 AAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
APE +++ D ++ GV++ EM G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 87/206 (42%), Gaps = 24/206 (11%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG G FG V++ TG AVK + + + + E+ GL P
Sbjct: 80 LGRGSFGEVHR---------MKDKQTGFQCAVKKVRLEVFR-----VEELVACAGLSSPR 125
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEEA 248
+V L G E + E + GSL L ++ LP + A +GL +LH
Sbjct: 126 IVPLYGAVREGPWVNIFMELLEGGSL-GQLIKQMGCLPEDRALYYLGQALEGLEYLHT-- 182
Query: 249 EKPVIYRDFKTSNILLDGE-YNAKLSDFG----LAKDGPEGDKTHVSTRVMGTYGYAAPE 303
+ +++ D K N+LL + A L DFG L DG G + GT + APE
Sbjct: 183 -RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGL-GKSLLTGDYIPGTETHMAPE 240
Query: 304 YVMTGHLTAKSDVYSFGVVLLEMLTG 329
VM AK D++S ++L ML G
Sbjct: 241 VVMGKPCDAKVDIWSSCCMMLHMLNG 266
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 94/211 (44%), Gaps = 29/211 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNH--DGLQGHKEWLAEVNYLGGLIH 186
+G G +G V A TGL VAVK L+ + K E+ L + H
Sbjct: 30 VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 187 PNLVKLIGCCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
N++ L+ E + LV M G+ N++ + ++ I +G
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQILRG 137
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
L ++H +I+RD K SN+ ++ + K+ D+GLA+ + +V+TR Y
Sbjct: 138 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATR-----WYR 189
Query: 301 APEYVMTG-HLTAKSDVYSFGVVLLEMLTGR 330
APE ++ H D++S G ++ E+LTGR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 71/153 (46%), Gaps = 4/153 (2%)
Query: 177 EVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALD 236
E + + L HP VKL +D++ + G L ++ R+ + +
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYI-RKIGSFDETCTRFYTAE 140
Query: 237 AAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 296
L +LH K +I+RD K NILL+ + + +++DFG AK K + +GT
Sbjct: 141 IVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 197
Query: 297 YGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
Y +PE + + SD+++ G ++ +++ G
Sbjct: 198 AQYVSPELLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 91/216 (42%), Gaps = 16/216 (7%)
Query: 117 KSATKSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLN--HDGLQGHKEW 174
K + F+ +LGEG F V + T A+K L H + +
Sbjct: 6 KKRPEDFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVPY 56
Query: 175 LA-EVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKI 233
+ E + + L HP VKL +D++ + G L ++ R+ +
Sbjct: 57 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFY 115
Query: 234 ALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRV 293
+ L +LH K +I+RD K NILL+ + + +++DFG AK K +
Sbjct: 116 TAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 172
Query: 294 MGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
+GT Y +PE + SD+++ G ++ +++ G
Sbjct: 173 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 91/216 (42%), Gaps = 16/216 (7%)
Query: 117 KSATKSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLN--HDGLQGHKEW 174
K + F+ +LGEG F V + T A+K L H + +
Sbjct: 5 KKRPEDFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVPY 55
Query: 175 LA-EVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKI 233
+ E + + L HP VKL +D++ + G L ++ R+ +
Sbjct: 56 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFY 114
Query: 234 ALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRV 293
+ L +LH K +I+RD K NILL+ + + +++DFG AK K +
Sbjct: 115 TAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 171
Query: 294 MGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
+GT Y +PE + SD+++ G ++ +++ G
Sbjct: 172 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 91/216 (42%), Gaps = 16/216 (7%)
Query: 117 KSATKSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLN--HDGLQGHKEW 174
K + F+ +LGEG F V + T A+K L H + +
Sbjct: 4 KKRPEDFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVPY 54
Query: 175 LA-EVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKI 233
+ E + + L HP VKL +D++ + G L ++ R+ +
Sbjct: 55 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFY 113
Query: 234 ALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRV 293
+ L +LH K +I+RD K NILL+ + + +++DFG AK K +
Sbjct: 114 TAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 170
Query: 294 MGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
+GT Y +PE + SD+++ G ++ +++ G
Sbjct: 171 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 91/216 (42%), Gaps = 16/216 (7%)
Query: 117 KSATKSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLN--HDGLQGHKEW 174
K + F+ +LGEG F V + T A+K L H + +
Sbjct: 3 KKRPEDFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVPY 53
Query: 175 LA-EVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKI 233
+ E + + L HP VKL +D++ + G L ++ R+ +
Sbjct: 54 VTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFY 112
Query: 234 ALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRV 293
+ L +LH K +I+RD K NILL+ + + +++DFG AK K +
Sbjct: 113 TAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 169
Query: 294 MGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
+GT Y +PE + SD+++ G ++ +++ G
Sbjct: 170 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 99/226 (43%), Gaps = 30/226 (13%)
Query: 120 TKSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLN-HDGLQGHKEWLAEV 178
+ F+ + LLGEG +G V +AT KP TG VA+K + D L E+
Sbjct: 10 SSDFQLKSLLGEGAYGVV--------CSATHKP-TGEIVAIKKIEPFDKPLFALRTLREI 60
Query: 179 NYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAA 238
L H N++ + QR +E + L + L S +M ++ D
Sbjct: 61 KILKHFKHENIITIFNI-----QRPDSFENFNEVYIIQELMQTDLHRVISTQM-LSDDHI 114
Query: 239 KGLAFLHEEAEKP-----VIYRDFKTSNILLDGEYNAKLSDFGLAK--DGPEGDKTHVS- 290
+ + A K VI+RD K SN+L++ + K+ DFGLA+ D D + +
Sbjct: 115 QYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTG 174
Query: 291 -----TRVMGTYGYAAPEYVMTGHLTAKS-DVYSFGVVLLEMLTGR 330
+ T Y APE ++T +++ DV+S G +L E+ R
Sbjct: 175 QQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 70/153 (45%), Gaps = 4/153 (2%)
Query: 177 EVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALD 236
E + + L HP VKL +D++ + G L ++ R+ + +
Sbjct: 83 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAE 141
Query: 237 AAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 296
L +LH K +I+RD K NILL+ + + +++DFG AK K + +GT
Sbjct: 142 IVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 198
Query: 297 YGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
Y +PE + SD+++ G ++ +++ G
Sbjct: 199 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 70/153 (45%), Gaps = 4/153 (2%)
Query: 177 EVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALD 236
E + + L HP VKL +D++ + G L ++ R+ + +
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAE 140
Query: 237 AAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 296
L +LH K +I+RD K NILL+ + + +++DFG AK K + +GT
Sbjct: 141 IVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 297 YGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
Y +PE + SD+++ G ++ +++ G
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 95/211 (45%), Gaps = 29/211 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNH--DGLQGHKEWLAEVNYLGGLIH 186
+G G +G V ++ +GL +AVK L+ + K E+ L + H
Sbjct: 59 VGSGAYGSV---------CSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 109
Query: 187 PNLVKLIGCCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
N++ L+ E + LV M G+ N++ + ++ I +G
Sbjct: 110 ENVIGLLDVFTPATSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQILRG 166
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
L ++H +I+RD K SN+ ++ + K+ DFGLA+ + +V+TR Y
Sbjct: 167 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 218
Query: 301 APEYVMTG-HLTAKSDVYSFGVVLLEMLTGR 330
APE ++ H D++S G ++ E+LTGR
Sbjct: 219 APEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 70/153 (45%), Gaps = 4/153 (2%)
Query: 177 EVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALD 236
E + + L HP VKL +D++ + G L ++ R+ + +
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAE 140
Query: 237 AAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 296
L +LH K +I+RD K NILL+ + + +++DFG AK K + +GT
Sbjct: 141 IVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 297 YGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
Y +PE + SD+++ G ++ +++ G
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 70/153 (45%), Gaps = 4/153 (2%)
Query: 177 EVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALD 236
E + + L HP VKL +D++ + G L ++ R+ + +
Sbjct: 83 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAE 141
Query: 237 AAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 296
L +LH K +I+RD K NILL+ + + +++DFG AK K + +GT
Sbjct: 142 IVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 198
Query: 297 YGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
Y +PE + SD+++ G ++ +++ G
Sbjct: 199 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 70/153 (45%), Gaps = 4/153 (2%)
Query: 177 EVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALD 236
E + + L HP VKL +D++ + G L ++ R+ + +
Sbjct: 85 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAE 143
Query: 237 AAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 296
L +LH K +I+RD K NILL+ + + +++DFG AK K + +GT
Sbjct: 144 IVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 200
Query: 297 YGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
Y +PE + SD+++ G ++ +++ G
Sbjct: 201 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 70/153 (45%), Gaps = 4/153 (2%)
Query: 177 EVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALD 236
E + + L HP VKL +D++ + G L ++ R+ + +
Sbjct: 80 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAE 138
Query: 237 AAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 296
L +LH K +I+RD K NILL+ + + +++DFG AK K + +GT
Sbjct: 139 IVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 297 YGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
Y +PE + SD+++ G ++ +++ G
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 70/153 (45%), Gaps = 4/153 (2%)
Query: 177 EVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALD 236
E + + L HP VKL +D++ + G L ++ R+ + +
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAE 140
Query: 237 AAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 296
L +LH K +I+RD K NILL+ + + +++DFG AK K + +GT
Sbjct: 141 IVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 297 YGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
Y +PE + SD+++ G ++ +++ G
Sbjct: 198 AQYVSPELLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 70/153 (45%), Gaps = 4/153 (2%)
Query: 177 EVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALD 236
E + + L HP VKL +D++ + G L ++ R+ + +
Sbjct: 80 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAE 138
Query: 237 AAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 296
L +LH K +I+RD K NILL+ + + +++DFG AK K + +GT
Sbjct: 139 IVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 297 YGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
Y +PE + SD+++ G ++ +++ G
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 70/153 (45%), Gaps = 4/153 (2%)
Query: 177 EVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALD 236
E + + L HP VKL +D++ + G L ++ R+ + +
Sbjct: 80 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAE 138
Query: 237 AAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 296
L +LH K +I+RD K NILL+ + + +++DFG AK K + +GT
Sbjct: 139 IVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 297 YGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
Y +PE + SD+++ G ++ +++ G
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 70/153 (45%), Gaps = 4/153 (2%)
Query: 177 EVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALD 236
E + + L HP VKL +D++ + G L ++ R+ + +
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAE 140
Query: 237 AAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 296
L +LH K +I+RD K NILL+ + + +++DFG AK K + +GT
Sbjct: 141 IVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 297 YGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
Y +PE + SD+++ G ++ +++ G
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 70/153 (45%), Gaps = 4/153 (2%)
Query: 177 EVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALD 236
E + + L HP VKL +D++ + G L ++ R+ + +
Sbjct: 82 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAE 140
Query: 237 AAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 296
L +LH K +I+RD K NILL+ + + +++DFG AK K + +GT
Sbjct: 141 IVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 297 YGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
Y +PE + SD+++ G ++ +++ G
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 80/184 (43%), Gaps = 30/184 (16%)
Query: 225 LPWSIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEG 284
+P I KIA+ K L LH + VI+RD K SN+L++ K+ DFG++ G
Sbjct: 150 IPEDILGKIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGIS--GYLV 205
Query: 285 DKTHVSTRVMGTYGYAAPEYV-----MTGHLTAKSDVYSFGVVLLEMLTGRRSMDK-NRP 338
D T G Y APE + G+ + KSD++S G+ ++E+ R D P
Sbjct: 206 DSV-AKTIDAGCKPYMAPERINPELNQKGY-SVKSDIWSLGITMIELAILRFPYDSWGTP 263
Query: 339 NGE-HNLVEWARPQLGERRRFYRLIDPCLEGCFSIKGAEKTIQLAASCLNRDQKARPRMS 397
+ +VE PQL + +D + CL ++ K RP
Sbjct: 264 FQQLKQVVEEPSPQLPADKFSAEFVD-----------------FTSQCLKKNSKERPTYP 306
Query: 398 EVVE 401
E+++
Sbjct: 307 ELMQ 310
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 92/231 (39%), Gaps = 39/231 (16%)
Query: 123 FRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLG 182
F +LG+G FG V K ++ A+K + H + L+EV L
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRY---------YAIKKIRHTE-EKLSTILSEVXLLA 57
Query: 183 GLIHPNLVKLIGCCIE-------------DDQRLLVYEFMPRGSLENHLFRRSLPLPWSI 229
L H +V+ +E + E+ +L + + +L
Sbjct: 58 SLNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDE 117
Query: 230 RMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAK------DGPE 283
++ + L+++H + +I+R+ K NI +D N K+ DFGLAK D +
Sbjct: 118 YWRLFRQILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILK 174
Query: 284 GDKTHVS------TRVMGTYGYAAPEYVM-TGHLTAKSDVYSFGVVLLEML 327
D ++ T +GT Y A E + TGH K D YS G++ E +
Sbjct: 175 LDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 87/206 (42%), Gaps = 24/206 (11%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
+G G FG V++ TG AVK + + + + E+ GL P
Sbjct: 66 VGRGSFGEVHR---------MKDKQTGFQCAVKKVRLEVFR-----VEELVACAGLSSPR 111
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEEA 248
+V L G E + E + GSL L ++ LP + A +GL +LH
Sbjct: 112 IVPLYGAVREGPWVNIFMELLEGGSL-GQLIKQMGCLPEDRALYYLGQALEGLEYLHT-- 168
Query: 249 EKPVIYRDFKTSNILLDGE-YNAKLSDFG----LAKDGPEGDKTHVSTRVMGTYGYAAPE 303
+ +++ D K N+LL + A L DFG L DG G + GT + APE
Sbjct: 169 -RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGL-GKSLLTGDYIPGTETHMAPE 226
Query: 304 YVMTGHLTAKSDVYSFGVVLLEMLTG 329
VM AK D++S ++L ML G
Sbjct: 227 VVMGKPCDAKVDIWSSCCMMLHMLNG 252
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 70/153 (45%), Gaps = 4/153 (2%)
Query: 177 EVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALD 236
E + + L HP VKL +D++ + G L ++ R+ + +
Sbjct: 80 ERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAE 138
Query: 237 AAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGT 296
L +LH K +I+RD K NILL+ + + +++DFG AK K + +GT
Sbjct: 139 IVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGT 195
Query: 297 YGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
Y +PE + SD+++ G ++ +++ G
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 89/210 (42%), Gaps = 33/210 (15%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEW---LAEVNYLGGLI 185
LG G FG V TG A+K L+ + KE L E L +
Sbjct: 49 LGTGSFGRV---------MLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN 99
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKIALDAAKGLA 242
P LVKL ++ +V E+ P G + +HL R S P +I L
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFE 155
Query: 243 FLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGY 299
+LH +IYRD K N+++D + +++DFGLAK V R + GT Y
Sbjct: 156 YLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGLAK--------RVKGRTWXLCGTPEY 204
Query: 300 AAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
APE +++ D ++ GV++ EM G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 83/185 (44%), Gaps = 24/185 (12%)
Query: 154 TGLPVAVKTLNHDGLQGHKEW---LAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMP 210
TG A+K L+ + K+ L E L + P LVKL ++ +V E++P
Sbjct: 65 TGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVP 124
Query: 211 RGSLENHLFR---RSLPLPWSIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGE 267
G + +HL R S P +I L +LH +IYRD K N+L+D +
Sbjct: 125 GGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEYLHS---LDLIYRDLKPENLLIDQQ 177
Query: 268 YNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLL 324
K++DFG AK V R + GT Y APE +++ D ++ GV++
Sbjct: 178 GYIKVADFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIY 229
Query: 325 EMLTG 329
EM G
Sbjct: 230 EMAAG 234
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 89/210 (42%), Gaps = 33/210 (15%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEW---LAEVNYLGGLI 185
LG G FG V TG A+K L+ + K+ L E L +
Sbjct: 49 LGTGSFGRV---------MLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKIALDAAKGLA 242
P LVKL ++ +V E++P G + +HL R S P +I L
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFE 155
Query: 243 FLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGY 299
+LH +IYRD K N+L+D + +++DFG AK V R + GT Y
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEY 204
Query: 300 AAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
APE +++ D ++ GV++ EM G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 94/211 (44%), Gaps = 29/211 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNH--DGLQGHKEWLAEVNYLGGLIH 186
+G G +G V A TG VAVK L+ + K E+ L + H
Sbjct: 26 VGSGAYGSV---------CAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 76
Query: 187 PNLVKLIGCCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
N++ L+ E + LV M G+ N++ + + ++ I +G
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCAKLTDDHVQFLI-YQILRG 133
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
L ++H +I+RD K SN+ ++ + K+ DFGLA+ + +V+TR Y
Sbjct: 134 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 185
Query: 301 APEYVMTG-HLTAKSDVYSFGVVLLEMLTGR 330
APE ++ H D++S G ++ E+LTGR
Sbjct: 186 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 87/206 (42%), Gaps = 24/206 (11%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
+G G FG V++ TG AVK + + + + E+ GL P
Sbjct: 82 VGRGSFGEVHR---------MKDKQTGFQCAVKKVRLEVFR-----VEELVACAGLSSPR 127
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEEA 248
+V L G E + E + GSL L ++ LP + A +GL +LH
Sbjct: 128 IVPLYGAVREGPWVNIFMELLEGGSL-GQLIKQMGCLPEDRALYYLGQALEGLEYLHT-- 184
Query: 249 EKPVIYRDFKTSNILLDGE-YNAKLSDFG----LAKDGPEGDKTHVSTRVMGTYGYAAPE 303
+ +++ D K N+LL + A L DFG L DG G + GT + APE
Sbjct: 185 -RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGL-GKSLLTGDYIPGTETHMAPE 242
Query: 304 YVMTGHLTAKSDVYSFGVVLLEMLTG 329
VM AK D++S ++L ML G
Sbjct: 243 VVMGKPCDAKVDIWSSCCMMLHMLNG 268
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 89/210 (42%), Gaps = 33/210 (15%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEW---LAEVNYLGGLI 185
LG G FG V TG A+K L+ + K+ L E L +
Sbjct: 49 LGTGSFGRV---------MLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKIALDAAKGLA 242
P LVKL ++ +V E++P G + +HL R S P +I L
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFE 155
Query: 243 FLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGY 299
+LH +IYRD K N+L+D + +++DFG AK V R + GT Y
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEY 204
Query: 300 AAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
APE +++ D ++ GV++ EM G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 93/211 (44%), Gaps = 29/211 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNH--DGLQGHKEWLAEVNYLGGLIH 186
+G G +G V A TG VAVK L+ + K E+ L + H
Sbjct: 49 VGSGAYGSV---------CAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 99
Query: 187 PNLVKLIGCCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
N++ L+ E + LV M G+ N++ + ++ I +G
Sbjct: 100 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQILRG 156
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
L ++H +I+RD K SN+ ++ + K+ DFGLA+ + +V+TR Y
Sbjct: 157 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 208
Query: 301 APEYVMTG-HLTAKSDVYSFGVVLLEMLTGR 330
APE ++ H D++S G ++ E+LTGR
Sbjct: 209 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 89/210 (42%), Gaps = 33/210 (15%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEW---LAEVNYLGGLI 185
LG G FG V TG A+K L+ + K+ L E L +
Sbjct: 49 LGTGSFGRV---------MLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKIALDAAKGLA 242
P LVKL ++ +V E++P G + +HL R S P +I L
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFE 155
Query: 243 FLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGY 299
+LH +IYRD K N+L+D + +++DFG AK V R + GT Y
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEY 204
Query: 300 AAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
APE +++ D ++ GV++ EM G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 93/211 (44%), Gaps = 29/211 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNH--DGLQGHKEWLAEVNYLGGLIH 186
+G G +G V A TG VAVK L+ + K E+ L + H
Sbjct: 50 VGSGAYGSV---------CAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 100
Query: 187 PNLVKLIGCCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
N++ L+ E + LV M G+ N++ + ++ I +G
Sbjct: 101 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQILRG 157
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
L ++H +I+RD K SN+ ++ + K+ DFGLA+ + +V+TR Y
Sbjct: 158 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 209
Query: 301 APEYVMTG-HLTAKSDVYSFGVVLLEMLTGR 330
APE ++ H D++S G ++ E+LTGR
Sbjct: 210 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 93/211 (44%), Gaps = 29/211 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNH--DGLQGHKEWLAEVNYLGGLIH 186
+G G +G V A TG VAVK L+ + K E+ L + H
Sbjct: 30 VGSGAYGSV---------CAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 187 PNLVKLIGCCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
N++ L+ E + LV M G+ N++ + ++ I +G
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQILRG 137
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
L ++H +I+RD K SN+ ++ + K+ DFGLA+ + +V+TR Y
Sbjct: 138 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 189
Query: 301 APEYVMTG-HLTAKSDVYSFGVVLLEMLTGR 330
APE ++ H D++S G ++ E+LTGR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 89/210 (42%), Gaps = 33/210 (15%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEW---LAEVNYLGGLI 185
LG G FG V TG A+K L+ + K+ L E L +
Sbjct: 50 LGTGSFGRV---------MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKIALDAAKGLA 242
P LVKL ++ +V E++P G + +HL R S P +I L
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFE 156
Query: 243 FLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGY 299
+LH +IYRD K N+L+D + +++DFG AK V R + GT Y
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEY 205
Query: 300 AAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
APE +++ D ++ GV++ EM G
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 93/211 (44%), Gaps = 29/211 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNH--DGLQGHKEWLAEVNYLGGLIH 186
+G G +G V A TG VAVK L+ + K E+ L + H
Sbjct: 36 VGSGAYGSV---------CAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 86
Query: 187 PNLVKLIGCCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
N++ L+ E + LV M G+ N++ + ++ I +G
Sbjct: 87 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQILRG 143
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
L ++H +I+RD K SN+ ++ + K+ DFGLA+ + +V+TR Y
Sbjct: 144 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 195
Query: 301 APEYVMTG-HLTAKSDVYSFGVVLLEMLTGR 330
APE ++ H D++S G ++ E+LTGR
Sbjct: 196 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 87/205 (42%), Gaps = 16/205 (7%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLN--HDGLQGHKEWLA-EVNYLGGL 184
+LGEG F V + T A+K L H + ++ E + + L
Sbjct: 21 ILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL 71
Query: 185 IHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFL 244
HP VKL +D++ + G L ++ R+ + + L +L
Sbjct: 72 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEIVSALEYL 130
Query: 245 HEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEY 304
H K +I+RD K NILL+ + + +++DFG AK K + +GT Y +PE
Sbjct: 131 HG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 187
Query: 305 VMTGHLTAKSDVYSFGVVLLEMLTG 329
+ SD+++ G ++ +++ G
Sbjct: 188 LTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 93/211 (44%), Gaps = 29/211 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNH--DGLQGHKEWLAEVNYLGGLIH 186
+G G +G V A TG VAVK L+ + K E+ L + H
Sbjct: 40 VGSGAYGSV---------CAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 90
Query: 187 PNLVKLIGCCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
N++ L+ E + LV M G+ N++ + ++ I +G
Sbjct: 91 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQILRG 147
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
L ++H +I+RD K SN+ ++ + K+ DFGLA+ + +V+TR Y
Sbjct: 148 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 199
Query: 301 APEYVMTG-HLTAKSDVYSFGVVLLEMLTGR 330
APE ++ H D++S G ++ E+LTGR
Sbjct: 200 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 97/233 (41%), Gaps = 42/233 (18%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNH--DGLQGHKEWLAEVNYLGGLI 185
L+G G +G VY + T VA+K +N + L K L E+ L L
Sbjct: 33 LIGRGSYGYVYLAY---------DKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLK 83
Query: 186 HPNLVKLIGCCIEDD----QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGL 241
+++L I DD L + + L+ LF+ + L I + G
Sbjct: 84 SDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKK-LFKTPIFLTEEHIKTILYNLLLGE 142
Query: 242 AFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKD-------------------GP 282
F+HE +I+RD K +N LL+ + + K+ DFGLA+ GP
Sbjct: 143 NFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGP 199
Query: 283 EGD--KTHVSTRVMGTYGYAAPEYVMTGHLTAKS-DVYSFGVVLLEMLTGRRS 332
K +++ V+ T Y APE ++ KS D++S G + E+L +S
Sbjct: 200 HNKNLKKQLTSHVV-TRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQS 251
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 89/210 (42%), Gaps = 33/210 (15%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEW---LAEVNYLGGLI 185
LG G FG V TG A+K L+ + K+ L E L +
Sbjct: 70 LGTGSFGRV---------MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKIALDAAKGLA 242
P LVKL ++ +V E++P G + +HL R S P +I L
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT----FE 176
Query: 243 FLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGY 299
+LH +IYRD K N+L+D + +++DFG AK V R + GT Y
Sbjct: 177 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEY 225
Query: 300 AAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
APE +++ D ++ GV++ EM G
Sbjct: 226 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 89/208 (42%), Gaps = 18/208 (8%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKT--LNHDGLQGHKEWLAEVNYLGGLIH 186
+GEG +G V+K T VA+K L+ D L E+ L L H
Sbjct: 10 IGEGTYGTVFKA---------KNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH 60
Query: 187 PNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHE 246
N+V+L D + LV+EF + L+ + + L I KGL F H
Sbjct: 61 KNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHS 119
Query: 247 EAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM 306
+ V++RD K N+L++ KL+DFGLA+ G + + T Y P+ +
Sbjct: 120 ---RNVLHRDLKPQNLLINRNGELKLADFGLARAF--GIPVRCYSAEVVTLWYRPPDVLF 174
Query: 307 TGHLTAKS-DVYSFGVVLLEMLTGRRSM 333
L + S D++S G + E+ R +
Sbjct: 175 GAKLYSTSIDMWSAGCIFAELANAARPL 202
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 93/213 (43%), Gaps = 18/213 (8%)
Query: 121 KSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLN--HDGLQGHKEWLA-E 177
+ F+ +LGEG F V + T A+K L H + ++ E
Sbjct: 29 EDFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVPYVTRE 79
Query: 178 VNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDA 237
+ + L HP VKL +D++ + G L ++ R+ + +
Sbjct: 80 RDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEI 138
Query: 238 AKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKD-GPEGDKTHVSTRVMGT 296
L +LH K +I+RD K NILL+ + + +++DFG AK PE + ++ V GT
Sbjct: 139 VSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV-GT 194
Query: 297 YGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
Y +PE + SD+++ G ++ +++ G
Sbjct: 195 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 93/211 (44%), Gaps = 29/211 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNH--DGLQGHKEWLAEVNYLGGLIH 186
+G G +G V A TG VAVK L+ + K E+ L + H
Sbjct: 26 VGSGAYGSV---------CAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 76
Query: 187 PNLVKLIGCCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
N++ L+ E + LV M G+ N++ + ++ I +G
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQILRG 133
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
L ++H +I+RD K SN+ ++ + K+ DFGLA+ + +V+TR Y
Sbjct: 134 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYR 185
Query: 301 APEYVMTG-HLTAKSDVYSFGVVLLEMLTGR 330
APE ++ H D++S G ++ E+LTGR
Sbjct: 186 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 90/212 (42%), Gaps = 16/212 (7%)
Query: 121 KSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLN--HDGLQGHKEWLA-E 177
+ F+ +LGEG F V + T A+K L H + ++ E
Sbjct: 29 EDFKFGKILGEGSFSTV---------VLARELATSREYAIKILEKRHIIKENKVPYVTRE 79
Query: 178 VNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDA 237
+ + L HP VKL +D++ + G L ++ R+ + +
Sbjct: 80 RDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI-RKIGSFDETCTRFYTAEI 138
Query: 238 AKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTY 297
L +LH K +I+RD K NILL+ + + +++DFG AK K + +GT
Sbjct: 139 VSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTA 195
Query: 298 GYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
Y +PE + SD+++ G ++ +++ G
Sbjct: 196 QYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 25/214 (11%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNH--DGLQGHKEWLAEVNYLGGLIH 186
+G G +G V ++ + TG VA+K + + D + K L E+ L H
Sbjct: 63 IGNGAYGVV---------SSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKH 113
Query: 187 PNLVKLIGCCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
N++ + E +V + M S + + S PL +G
Sbjct: 114 DNIIAIKDILRPTVPYGEFKSVYVVLDLM--ESDLHQIIHSSQPLTLEHVRYFLYQLLRG 171
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKD--GPEGDKTHVSTRVMGTYG 298
L ++H VI+RD K SN+L++ K+ DFG+A+ + + T + T
Sbjct: 172 LKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRW 228
Query: 299 YAAPEYVMTGH-LTAKSDVYSFGVVLLEMLTGRR 331
Y APE +++ H T D++S G + EML R+
Sbjct: 229 YRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 89/210 (42%), Gaps = 33/210 (15%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEW---LAEVNYLGGLI 185
LG G FG V TG A+K L+ + K+ L E L +
Sbjct: 50 LGTGSFGRV---------MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKIALDAAKGLA 242
P LVKL ++ +V E++P G + +HL R S P +I L
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFE 156
Query: 243 FLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGY 299
+LH +IYRD K N+L+D + +++DFG AK V R + GT Y
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEY 205
Query: 300 AAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
APE +++ D ++ GV++ EM G
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 89/210 (42%), Gaps = 33/210 (15%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEW---LAEVNYLGGLI 185
LG G FG V TG A+K L+ + K+ L E L +
Sbjct: 50 LGTGSFGRV---------MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKIALDAAKGLA 242
P LVKL ++ +V E++P G + +HL R S P +I L
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFE 156
Query: 243 FLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGY 299
+LH +IYRD K N+L+D + +++DFG AK V R + GT Y
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEY 205
Query: 300 AAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
APE +++ D ++ GV++ EM G
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 88/210 (41%), Gaps = 33/210 (15%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEW---LAEVNYLGGLI 185
LG G FG V TG A+K L+ + K+ L E L +
Sbjct: 50 LGTGSFGRV---------MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKIALDAAKGLA 242
P LVKL ++ +V E+ P G + +HL R S P +I L
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFE 156
Query: 243 FLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGY 299
+LH +IYRD K N+++D + K++DFG AK V R + GT Y
Sbjct: 157 YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCGTPEY 205
Query: 300 AAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
APE +++ D ++ GV++ EM G
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 81/181 (44%), Gaps = 18/181 (9%)
Query: 158 VAVKTLNH--DGLQGHKEWLAEVNYLGGLIHPNLVKLI-----GCCIEDDQRLLVYEFMP 210
VAVK L+ L + E+ L L H N++ L+ IED + + +
Sbjct: 56 VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLM 115
Query: 211 RGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNA 270
L N +S L + +GL ++H +I+RD K SN+ ++ +
Sbjct: 116 GADLNN--IVKSQALSDEHVQFLVYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDSEL 170
Query: 271 KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTAKSDVYSFGVVLLEMLTG 329
++ DFGLA+ E +V+TR Y APE ++ H D++S G ++ E+L G
Sbjct: 171 RILDFGLARQADEEMTGYVATR-----WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQG 225
Query: 330 R 330
+
Sbjct: 226 K 226
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 88/207 (42%), Gaps = 27/207 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEW---LAEVNYLGGLI 185
LG G FG V TG A+K L+ + K+ L E L +
Sbjct: 50 LGTGSFGRV---------MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKIALDAAKGLA 242
P LVKL ++ +V E++P G + +HL R S P +I L
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFE 156
Query: 243 FLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAP 302
+LH +IYRD K N+L+D + +++DFG AK T + GT Y AP
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWT-----LCGTPEYLAP 208
Query: 303 EYVMTGHLTAKSDVYSFGVVLLEMLTG 329
E +++ D ++ GV++ EM G
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 74/160 (46%), Gaps = 15/160 (9%)
Query: 175 LAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSL--PLPWSIRMK 232
L EV L L HPN++KL + LV E G L + + R + ++ MK
Sbjct: 69 LDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMK 128
Query: 233 IALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYN---AKLSDFGLAKDGPEGDKTHV 289
L G +LH+ +++RD K N+LL+ + K+ DFGL+ G K
Sbjct: 129 QVLS---GTTYLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKM-- 180
Query: 290 STRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
+GT Y APE V+ K DV+S GV+L +L G
Sbjct: 181 -KERLGTAYYIAPE-VLRKKYDEKCDVWSCGVILYILLCG 218
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 89/210 (42%), Gaps = 33/210 (15%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEW---LAEVNYLGGLI 185
LG G FG V TG A+K L+ + K+ L E L +
Sbjct: 42 LGTGSFGRV---------MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 92
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKIALDAAKGLA 242
P LVKL ++ +V E++P G + +HL R S P +I L
Sbjct: 93 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFE 148
Query: 243 FLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGY 299
+LH +IYRD K N+L+D + +++DFG AK V R + GT Y
Sbjct: 149 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEY 197
Query: 300 AAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
APE +++ D ++ GV++ EM G
Sbjct: 198 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 81/187 (43%), Gaps = 36/187 (19%)
Query: 225 LPWSIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGL------- 277
+P I KIA+ K L LH + VI+RD K SN+L++ K+ DFG+
Sbjct: 106 IPEDILGKIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDD 163
Query: 278 -AKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTGRRSMDK- 335
AKD G K +++ + PE G+ + KSD++S G+ ++E+ R D
Sbjct: 164 VAKDIDAGCKPYMAPERIN------PELNQKGY-SVKSDIWSLGITMIELAILRFPYDSW 216
Query: 336 NRPNGE-HNLVEWARPQLGERRRFYRLIDPCLEGCFSIKGAEKTIQLAASCLNRDQKARP 394
P + +VE PQL + +D + CL ++ K RP
Sbjct: 217 GTPFQQLKQVVEEPSPQLPADKFSAEFVD-----------------FTSQCLKKNSKERP 259
Query: 395 RMSEVVE 401
E+++
Sbjct: 260 TYPELMQ 266
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 93/211 (44%), Gaps = 29/211 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNH--DGLQGHKEWLAEVNYLGGLIH 186
+G G +G V A TGL VAVK L+ + K E+ L + H
Sbjct: 30 VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 187 PNLVKLIGCCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
N++ L+ E + LV M G+ N++ + ++ I +G
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQILRG 137
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
L ++H +I+RD K SN+ ++ + K+ FGLA+ + +V+TR Y
Sbjct: 138 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATR-----WYR 189
Query: 301 APEYVMTG-HLTAKSDVYSFGVVLLEMLTGR 330
APE ++ H D++S G ++ E+LTGR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 74/160 (46%), Gaps = 15/160 (9%)
Query: 175 LAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSL--PLPWSIRMK 232
L EV L L HPN++KL + LV E G L + + R + ++ MK
Sbjct: 52 LDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMK 111
Query: 233 IALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYN---AKLSDFGLAKDGPEGDKTHV 289
L G +LH+ +++RD K N+LL+ + K+ DFGL+ G K
Sbjct: 112 QVL---SGTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKM-- 163
Query: 290 STRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
+GT Y APE V+ K DV+S GV+L +L G
Sbjct: 164 -KERLGTAYYIAPE-VLRKKYDEKCDVWSCGVILYILLCG 201
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Query: 234 ALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRV 293
+ AKG+ FL A + I+RD NILL + K+ DFGLA+D +
Sbjct: 199 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 255
Query: 294 MGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ APE + T +SDV+SFGV+L E+ +
Sbjct: 256 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 89/210 (42%), Gaps = 33/210 (15%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEW---LAEVNYLGGLI 185
LG G FG V TG A+K L+ + K+ L E L +
Sbjct: 50 LGTGSFGRV---------MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKIALDAAKGLA 242
P LVKL ++ +V E++P G + +HL R S P +I L
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFE 156
Query: 243 FLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGY 299
+LH +IYRD K N+L+D + +++DFG AK V R + GT Y
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEY 205
Query: 300 AAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
APE +++ D ++ GV++ EM G
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 75/158 (47%), Gaps = 11/158 (6%)
Query: 175 LAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 234
L EV L L HPN++KL + LV E G L + + R + I
Sbjct: 84 LEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHR-MKFNEVDAAVII 142
Query: 235 LDAAKGLAFLHEEAEKPVIYRDFKTSNILLDG-EYNA--KLSDFGLAKDGPEGDKTHVST 291
G+ +LH+ +++RD K N+LL+ E +A K+ DFGL+ ++ +
Sbjct: 143 KQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLS--AVFENQKKMKE 197
Query: 292 RVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
R +GT Y APE V+ K DV+S GV+L +L G
Sbjct: 198 R-LGTAYYIAPE-VLRKKYDEKCDVWSIGVILFILLAG 233
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 25/214 (11%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNH--DGLQGHKEWLAEVNYLGGLIH 186
+G G +G V ++ + TG VA+K + + D + K L E+ L H
Sbjct: 62 IGNGAYGVV---------SSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKH 112
Query: 187 PNLVKLIGCCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
N++ + E +V + M S + + S PL +G
Sbjct: 113 DNIIAIKDILRPTVPYGEFKSVYVVLDLM--ESDLHQIIHSSQPLTLEHVRYFLYQLLRG 170
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKD--GPEGDKTHVSTRVMGTYG 298
L ++H VI+RD K SN+L++ K+ DFG+A+ + + T + T
Sbjct: 171 LKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRW 227
Query: 299 YAAPEYVMTGH-LTAKSDVYSFGVVLLEMLTGRR 331
Y APE +++ H T D++S G + EML R+
Sbjct: 228 YRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Query: 234 ALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRV 293
+ AKG+ FL A + I+RD NILL + K+ DFGLA+D +
Sbjct: 206 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 262
Query: 294 MGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ APE + T +SDV+SFGV+L E+ +
Sbjct: 263 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Query: 234 ALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRV 293
+ AKG+ FL A + I+RD NILL + K+ DFGLA+D +
Sbjct: 204 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 260
Query: 294 MGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ APE + T +SDV+SFGV+L E+ +
Sbjct: 261 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 93/211 (44%), Gaps = 29/211 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNH--DGLQGHKEWLAEVNYLGGLIH 186
+G G +G V A TGL VAVK L+ + K E+ L + H
Sbjct: 30 VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 187 PNLVKLIGCCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
N++ L+ E + LV M G+ N++ + ++ I +G
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQILRG 137
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
L ++H +I+RD K SN+ ++ + K+ D GLA+ + +V+TR Y
Sbjct: 138 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVATR-----WYR 189
Query: 301 APEYVMTG-HLTAKSDVYSFGVVLLEMLTGR 330
APE ++ H D++S G ++ E+LTGR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 86/207 (41%), Gaps = 27/207 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEW---LAEVNYLGGLI 185
LG G FG V TG A+K L+ + K+ L E L +
Sbjct: 42 LGTGSFGRV---------MLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 92
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLH 245
P LVKL ++ +V E++P G + +HL R R A +LH
Sbjct: 93 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH 151
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGYAAP 302
+IYRD K N+L+D + +++DFG AK V R + GT Y AP
Sbjct: 152 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAP 200
Query: 303 EYVMTGHLTAKSDVYSFGVVLLEMLTG 329
E +++ D ++ GV++ EM G
Sbjct: 201 EIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Query: 234 ALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRV 293
+ AKG+ FL A + I+RD NILL + K+ DFGLA+D +
Sbjct: 197 SFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 253
Query: 294 MGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
+ APE + T +SDV+SFGV+L E+ +
Sbjct: 254 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 89/210 (42%), Gaps = 33/210 (15%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEW---LAEVNYLGGLI 185
LG G FG V TG A+K L+ + K+ L E L +
Sbjct: 49 LGTGSFGRV---------MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKIALDAAKGLA 242
P LVKL ++ +V E++P G + +HL R S P +I L
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFE 155
Query: 243 FLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGY 299
+LH +IYRD K N+L+D + +++DFG AK V R + GT Y
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEY 204
Query: 300 AAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
APE +++ D ++ GV++ EM G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 88/210 (41%), Gaps = 33/210 (15%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEW---LAEVNYLGGLI 185
LG G FG V TG A+K L+ + K+ L E L +
Sbjct: 49 LGTGSFGRV---------MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKIALDAAKGLA 242
P LVKL ++ +V E+ P G + +HL R S P +I L
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFE 155
Query: 243 FLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGY 299
+LH +IYRD K N+++D + K++DFG AK V R + GT Y
Sbjct: 156 YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCGTPEY 204
Query: 300 AAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
APE +++ D ++ GV++ EM G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 89/210 (42%), Gaps = 33/210 (15%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEW---LAEVNYLGGLI 185
LG G FG V TG A+K L+ + K+ L E L +
Sbjct: 49 LGTGSFGRV---------MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKIALDAAKGLA 242
P LVKL ++ +V E++P G + +HL R S P +I L
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFE 155
Query: 243 FLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGY 299
+LH +IYRD K N+L+D + +++DFG AK V R + GT Y
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEY 204
Query: 300 AAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
APE +++ D ++ GV++ EM G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 89/210 (42%), Gaps = 33/210 (15%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEW---LAEVNYLGGLI 185
LG G FG V TG A+K L+ + K+ L E L +
Sbjct: 49 LGTGSFGRV---------MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKIALDAAKGLA 242
P LVKL ++ +V E++P G + +HL R S P +I L
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFE 155
Query: 243 FLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGY 299
+LH +IYRD K N+L+D + +++DFG AK V R + GT Y
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEY 204
Query: 300 AAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
APE +++ D ++ GV++ EM G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 95/215 (44%), Gaps = 33/215 (15%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHP 187
++G G FG VY+ + +G VA+K + LQG E+ + L H
Sbjct: 27 VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQGKAFKNRELQIMRKLDHC 73
Query: 188 NLVKLIGCCI-----EDDQRL-LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALDAAK 239
N+V+L +D+ L LV +++P + H R LP +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 240 GLAFLHEEAEKPVIYRDFKTSNILLDGEYNA-KLSDFGLAKDGPEGDK--THVSTRVMGT 296
LA++H + +RD K N+LLD + KL DFG AK G+ +++ +R
Sbjct: 134 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY--- 187
Query: 297 YGYAAPEYVM-TGHLTAKSDVYSFGVVLLEMLTGR 330
Y APE + T+ DV+S G VL E+L G+
Sbjct: 188 --YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 93/211 (44%), Gaps = 29/211 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNH--DGLQGHKEWLAEVNYLGGLIH 186
+G G +G V A TGL VAVK L+ + K E+ L + H
Sbjct: 30 VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 187 PNLVKLIGCCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
N++ L+ E + LV M G+ N++ + ++ I +G
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQILRG 137
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
L ++H +I+RD K SN+ ++ + K+ D GLA+ + +V+TR Y
Sbjct: 138 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVATR-----WYR 189
Query: 301 APEYVMTG-HLTAKSDVYSFGVVLLEMLTGR 330
APE ++ H D++S G ++ E+LTGR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 80/178 (44%), Gaps = 15/178 (8%)
Query: 158 VAVKTLNHDGLQGHKEWLA-EVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLEN 216
VA+K + + L+G + + E+ L + HPN+V L L+ + + G L +
Sbjct: 46 VAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFD 105
Query: 217 HLFRRSLPLPWSIRMKI--ALDAAKGLAFLHEEAEKPVIYRDFKTSNIL---LDGEYNAK 271
+ + I LDA K +LH+ +++RD K N+L LD +
Sbjct: 106 RIVEKGFYTERDASRLIFQVLDAVK---YLHDLG---IVHRDLKPENLLYYSLDEDSKIM 159
Query: 272 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
+SDFGL+K D V + GT GY APE + + D +S GV+ +L G
Sbjct: 160 ISDFGLSK---MEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 95/215 (44%), Gaps = 33/215 (15%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHP 187
++G G FG VY+ + +G VA+K + LQG E+ + L H
Sbjct: 27 VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQGKAFKNRELQIMRKLDHC 73
Query: 188 NLVKLIGCCI-----EDDQRL-LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALDAAK 239
N+V+L +D+ L LV +++P + H R LP +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 240 GLAFLHEEAEKPVIYRDFKTSNILLDGEYNA-KLSDFGLAKDGPEGDK--THVSTRVMGT 296
LA++H + +RD K N+LLD + KL DFG AK G+ +++ +R
Sbjct: 134 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY--- 187
Query: 297 YGYAAPEYVM-TGHLTAKSDVYSFGVVLLEMLTGR 330
Y APE + T+ DV+S G VL E+L G+
Sbjct: 188 --YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 88/207 (42%), Gaps = 27/207 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEW---LAEVNYLGGLI 185
LG G FG V TG A+K L+ + K+ L E L +
Sbjct: 35 LGTGSFGRV---------MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 85
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKIALDAAKGLA 242
P LVKL ++ +V E++P G + +HL R S P +I L
Sbjct: 86 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFE 141
Query: 243 FLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAP 302
+LH +IYRD K N+L+D + +++DFG AK T + GT Y AP
Sbjct: 142 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWT-----LCGTPEYLAP 193
Query: 303 EYVMTGHLTAKSDVYSFGVVLLEMLTG 329
E +++ D ++ GV++ EM G
Sbjct: 194 EIILSKGYNKAVDWWALGVLIYEMAAG 220
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 80/178 (44%), Gaps = 15/178 (8%)
Query: 158 VAVKTLNHDGLQGHKEWLA-EVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLEN 216
VA+K + + L+G + + E+ L + HPN+V L L+ + + G L +
Sbjct: 46 VAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFD 105
Query: 217 HLFRRSLPLPWSIRMKI--ALDAAKGLAFLHEEAEKPVIYRDFKTSNIL---LDGEYNAK 271
+ + I LDA K +LH+ +++RD K N+L LD +
Sbjct: 106 RIVEKGFYTERDASRLIFQVLDAVK---YLHDLG---IVHRDLKPENLLYYSLDEDSKIM 159
Query: 272 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
+SDFGL+K D V + GT GY APE + + D +S GV+ +L G
Sbjct: 160 ISDFGLSK---MEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 79/178 (44%), Gaps = 15/178 (8%)
Query: 158 VAVKTLNHDGLQGHKEWLA-EVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLEN 216
VA+K + L+G + + E+ L + HPN+V L L+ + + G L +
Sbjct: 46 VAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFD 105
Query: 217 HLFRRSLPLPWSIRMKI--ALDAAKGLAFLHEEAEKPVIYRDFKTSNIL---LDGEYNAK 271
+ + I LDA K +LH+ +++RD K N+L LD +
Sbjct: 106 RIVEKGFYTERDASRLIFQVLDAVK---YLHDLG---IVHRDLKPENLLYYSLDEDSKIM 159
Query: 272 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
+SDFGL+K D V + GT GY APE + + D +S GV+ +L G
Sbjct: 160 ISDFGLSK---MEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 80/178 (44%), Gaps = 15/178 (8%)
Query: 158 VAVKTLNHDGLQGHKEWLA-EVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLEN 216
VA+K + + L+G + + E+ L + HPN+V L L+ + + G L +
Sbjct: 46 VAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFD 105
Query: 217 HLFRRSLPLPWSIRMKI--ALDAAKGLAFLHEEAEKPVIYRDFKTSNIL---LDGEYNAK 271
+ + I LDA K +LH+ +++RD K N+L LD +
Sbjct: 106 RIVEKGFYTERDASRLIFQVLDAVK---YLHDLG---IVHRDLKPENLLYYSLDEDSKIM 159
Query: 272 LSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
+SDFGL+K D V + GT GY APE + + D +S GV+ +L G
Sbjct: 160 ISDFGLSK---MEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 93/215 (43%), Gaps = 33/215 (15%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHP 187
++G G FG VY+ + +G VA+K + LQ + E+ + L H
Sbjct: 61 VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQDKRFKNRELQIMRKLDHC 107
Query: 188 NLVKLIGCCIEDDQRL------LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALDAAK 239
N+V+L ++ LV +++P + H R LP +
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 167
Query: 240 GLAFLHEEAEKPVIYRDFKTSNILLDGEYNA-KLSDFGLAKDGPEGDK--THVSTRVMGT 296
LA++H + +RD K N+LLD + KL DFG AK G+ +++ +R
Sbjct: 168 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY--- 221
Query: 297 YGYAAPEYVM-TGHLTAKSDVYSFGVVLLEMLTGR 330
Y APE + T+ DV+S G VL E+L G+
Sbjct: 222 --YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 92/211 (43%), Gaps = 29/211 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNH--DGLQGHKEWLAEVNYLGGLIH 186
+G G +G V A TG VAVK L+ + K E+ L + H
Sbjct: 50 VGSGAYGSV---------CAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 100
Query: 187 PNLVKLIGCCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
N++ L+ E + LV M G+ N++ + ++ I +G
Sbjct: 101 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQILRG 157
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
L ++H +I+RD K SN+ ++ + K+ DFGLA+ + V+TR Y
Sbjct: 158 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVATR-----WYR 209
Query: 301 APEYVMTG-HLTAKSDVYSFGVVLLEMLTGR 330
APE ++ H D++S G ++ E+LTGR
Sbjct: 210 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 93/215 (43%), Gaps = 33/215 (15%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHP 187
++G G FG VY+ + +G VA+K + LQ + E+ + L H
Sbjct: 63 VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQDKRFKNRELQIMRKLDHC 109
Query: 188 NLVKLIGCCIEDDQRL------LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALDAAK 239
N+V+L ++ LV +++P + H R LP +
Sbjct: 110 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 169
Query: 240 GLAFLHEEAEKPVIYRDFKTSNILLDGEYNA-KLSDFGLAKDGPEGDK--THVSTRVMGT 296
LA++H + +RD K N+LLD + KL DFG AK G+ +++ +R
Sbjct: 170 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY--- 223
Query: 297 YGYAAPEYVM-TGHLTAKSDVYSFGVVLLEMLTGR 330
Y APE + T+ DV+S G VL E+L G+
Sbjct: 224 --YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 93/215 (43%), Gaps = 33/215 (15%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHP 187
++G G FG VY+ + +G VA+K + LQ + E+ + L H
Sbjct: 65 VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQDKRFKNRELQIMRKLDHC 111
Query: 188 NLVKLIGCCIEDDQRL------LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALDAAK 239
N+V+L ++ LV +++P + H R LP +
Sbjct: 112 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 171
Query: 240 GLAFLHEEAEKPVIYRDFKTSNILLDGEYNA-KLSDFGLAKDGPEGDK--THVSTRVMGT 296
LA++H + +RD K N+LLD + KL DFG AK G+ +++ +R
Sbjct: 172 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY--- 225
Query: 297 YGYAAPEYVM-TGHLTAKSDVYSFGVVLLEMLTGR 330
Y APE + T+ DV+S G VL E+L G+
Sbjct: 226 --YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 85/207 (41%), Gaps = 27/207 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEW---LAEVNYLGGLI 185
LG G FG V TG A+K L+ + K+ L E L +
Sbjct: 49 LGTGSFGRV---------MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLH 245
P LVKL ++ +V E+ P G + +HL R R A +LH
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH 158
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGYAAP 302
+IYRD K N+++D + K++DFG AK V R + GT Y AP
Sbjct: 159 S---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCGTPEYLAP 207
Query: 303 EYVMTGHLTAKSDVYSFGVVLLEMLTG 329
E +++ D ++ GV++ EM G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 86/207 (41%), Gaps = 27/207 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEW---LAEVNYLGGLI 185
LG G FG V TG A+K L+ + K+ L E L +
Sbjct: 50 LGTGSFGRV---------MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLH 245
P LVKL ++ +V E++P G + +HL R R A +LH
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH 159
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGYAAP 302
+IYRD K N+L+D + +++DFG AK V R + GT Y AP
Sbjct: 160 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAP 208
Query: 303 EYVMTGHLTAKSDVYSFGVVLLEMLTG 329
E +++ D ++ GV++ EM G
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 86/207 (41%), Gaps = 27/207 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEW---LAEVNYLGGLI 185
LG G FG V TG A+K L+ + K+ L E L +
Sbjct: 49 LGTGSFGRV---------MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLH 245
P LVKL ++ +V E++P G + +HL R R A +LH
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH 158
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGYAAP 302
+IYRD K N+L+D + +++DFG AK V R + GT Y AP
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAP 207
Query: 303 EYVMTGHLTAKSDVYSFGVVLLEMLTG 329
E +++ D ++ GV++ EM G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 92/211 (43%), Gaps = 29/211 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNH--DGLQGHKEWLAEVNYLGGLIH 186
+G G +G V A TG VAVK L+ + K E+ L + H
Sbjct: 30 VGSGAYGSV---------CAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 187 PNLVKLIGCCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
N++ L+ E + LV M G+ N++ + ++ I +G
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQILRG 137
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
L ++H +I+RD K SN+ ++ + K+ DFGLA+ + V+TR Y
Sbjct: 138 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-----WYR 189
Query: 301 APEYVMTG-HLTAKSDVYSFGVVLLEMLTGR 330
APE ++ H D++S G ++ E+LTGR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 86/207 (41%), Gaps = 27/207 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEW---LAEVNYLGGLI 185
LG G FG V TG A+K L+ + K+ L E L +
Sbjct: 49 LGTGSFGRV---------MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLH 245
P LVKL ++ +V E++P G + +HL R R A +LH
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH 158
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGYAAP 302
+IYRD K N+L+D + +++DFG AK V R + GT Y AP
Sbjct: 159 S---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAP 207
Query: 303 EYVMTGHLTAKSDVYSFGVVLLEMLTG 329
E +++ D ++ GV++ EM G
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 92/211 (43%), Gaps = 29/211 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNH--DGLQGHKEWLAEVNYLGGLIH 186
+G G +G V A TG VAVK L+ + K E+ L + H
Sbjct: 30 VGSGAYGSV---------CAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 187 PNLVKLIGCCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
N++ L+ E + LV M G+ N++ + ++ I +G
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQILRG 137
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
L ++H +I+RD K SN+ ++ + K+ DFGLA+ + V+TR Y
Sbjct: 138 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-----WYR 189
Query: 301 APEYVMTG-HLTAKSDVYSFGVVLLEMLTGR 330
APE ++ H D++S G ++ E+LTGR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 92/228 (40%), Gaps = 48/228 (21%)
Query: 121 KSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGH---KEWLAE 177
K++ +G G +G V + + +G VA+K L+ Q K E
Sbjct: 42 KTYVSPTHVGSGAYGSV---------CSAIDKRSGEKVAIKKLSR-PFQSEIFAKRAYRE 91
Query: 178 VNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHL-FRRSLPLPWSIRMKI--- 233
+ L + H N++ L+ F P SL N F +P + KI
Sbjct: 92 LLLLKHMQHENVIGLLDV------------FTPASSLRNFYDFYLVMPFMQTDLQKIMGM 139
Query: 234 ----------ALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPE 283
KGL ++H V++RD K N+ ++ + K+ DFGLA+
Sbjct: 140 EFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADA 196
Query: 284 GDKTHVSTRVMGTYGYAAPEYVMTG-HLTAKSDVYSFGVVLLEMLTGR 330
+V TR Y APE +++ H D++S G ++ EMLTG+
Sbjct: 197 EMTGYVVTR-----WYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 92/211 (43%), Gaps = 29/211 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNH--DGLQGHKEWLAEVNYLGGLIH 186
+G G +G V A TG VAVK L+ + K E+ L + H
Sbjct: 26 VGSGAYGSV---------CAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 76
Query: 187 PNLVKLIGCCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
N++ L+ E + LV M G+ N++ + ++ I +G
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQILRG 133
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
L ++H +I+RD K SN+ ++ + K+ DFGLA+ + V+TR Y
Sbjct: 134 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-----WYR 185
Query: 301 APEYVMTG-HLTAKSDVYSFGVVLLEMLTGR 330
APE ++ H D++S G ++ E+LTGR
Sbjct: 186 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 93/215 (43%), Gaps = 33/215 (15%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHP 187
++G G FG VY+ + +G VA+K + LQ + E+ + L H
Sbjct: 55 VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQDKRFKNRELQIMRKLDHC 101
Query: 188 NLVKLIGCCIEDDQRL------LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALDAAK 239
N+V+L ++ LV +++P + H R LP +
Sbjct: 102 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 161
Query: 240 GLAFLHEEAEKPVIYRDFKTSNILLDGEYNA-KLSDFGLAKDGPEGDK--THVSTRVMGT 296
LA++H + +RD K N+LLD + KL DFG AK G+ +++ +R
Sbjct: 162 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY--- 215
Query: 297 YGYAAPEYVM-TGHLTAKSDVYSFGVVLLEMLTGR 330
Y APE + T+ DV+S G VL E+L G+
Sbjct: 216 --YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 92/228 (40%), Gaps = 48/228 (21%)
Query: 121 KSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGH---KEWLAE 177
K++ +G G +G V + + +G VA+K L+ Q K E
Sbjct: 24 KTYVSPTHVGSGAYGSV---------CSAIDKRSGEKVAIKKLSR-PFQSEIFAKRAYRE 73
Query: 178 VNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHL-FRRSLPLPWSIRMKI--- 233
+ L + H N++ L+ F P SL N F +P + KI
Sbjct: 74 LLLLKHMQHENVIGLLDV------------FTPASSLRNFYDFYLVMPFMQTDLQKIMGL 121
Query: 234 ----------ALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPE 283
KGL ++H V++RD K N+ ++ + K+ DFGLA+
Sbjct: 122 KFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADA 178
Query: 284 GDKTHVSTRVMGTYGYAAPEYVMTG-HLTAKSDVYSFGVVLLEMLTGR 330
+V TR Y APE +++ H D++S G ++ EMLTG+
Sbjct: 179 EMTGYVVTR-----WYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 93/215 (43%), Gaps = 33/215 (15%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHP 187
++G G FG VY+ + +G VA+K + LQ + E+ + L H
Sbjct: 106 VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQDKRFKNRELQIMRKLDHC 152
Query: 188 NLVKLIGCCIEDDQRL------LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALDAAK 239
N+V+L ++ LV +++P + H R LP +
Sbjct: 153 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 212
Query: 240 GLAFLHEEAEKPVIYRDFKTSNILLDGEYNA-KLSDFGLAKDGPEGDK--THVSTRVMGT 296
LA++H + +RD K N+LLD + KL DFG AK G+ +++ +R
Sbjct: 213 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY--- 266
Query: 297 YGYAAPEYVM-TGHLTAKSDVYSFGVVLLEMLTGR 330
Y APE + T+ DV+S G VL E+L G+
Sbjct: 267 --YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 93/211 (44%), Gaps = 29/211 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNH--DGLQGHKEWLAEVNYLGGLIH 186
+G G +G V A TGL VAVK L+ + K E+ L + H
Sbjct: 30 VGSGAYGSV---------CAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 187 PNLVKLIGCCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
N++ L+ E + LV M G+ N++ + ++ I +G
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQILRG 137
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
L ++H +I+RD K SN+ ++ + K+ D GLA+ + +V+TR Y
Sbjct: 138 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVATR-----WYR 189
Query: 301 APEYVMTG-HLTAKSDVYSFGVVLLEMLTGR 330
APE ++ H D++S G ++ E+LTGR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 91/213 (42%), Gaps = 29/213 (13%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHP 187
++G G FG VY+ + +G VA+K + LQ + E+ + L H
Sbjct: 61 VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQDKRFKNRELQIMRKLDHC 107
Query: 188 NLVKLIGCCIEDDQRL------LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALDAAK 239
N+V+L ++ LV +++P + H R LP +
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 167
Query: 240 GLAFLHEEAEKPVIYRDFKTSNILLDGEYNA-KLSDFGLAKDGPEGDKTHVSTRVMGTYG 298
LA++H + +RD K N+LLD + KL DFG AK G+ + + +
Sbjct: 168 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRY 221
Query: 299 YAAPEYVM-TGHLTAKSDVYSFGVVLLEMLTGR 330
Y APE + T+ DV+S G VL E+L G+
Sbjct: 222 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 90/214 (42%), Gaps = 29/214 (13%)
Query: 123 FRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLG 182
F E LG G VY+ + GT P A+K L K E+ L
Sbjct: 55 FEVESELGRGATSIVYR---------CKQKGTQKPYALKVLKKT--VDKKIVRTEIGVLL 103
Query: 183 GLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAK--- 239
L HPN++KL + LV E + G L + + + + A DA K
Sbjct: 104 RLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGY-----YSERDAADAVKQIL 158
Query: 240 -GLAFLHEEAEKPVIYRDFKTSNILLDG---EYNAKLSDFGLAKDGPEGDKTHVSTRVMG 295
+A+LHE +++RD K N+L + K++DFGL+K + + V G
Sbjct: 159 EAVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIV---EHQVLMKTVCG 212
Query: 296 TYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
T GY APE + + D++S G++ +L G
Sbjct: 213 TPGYCAPEILRGCAYGPEVDMWSVGIITYILLCG 246
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 93/219 (42%), Gaps = 32/219 (14%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNH-DGLQGHKEWLAEVNYLGGLIH 186
+LG+G V++G TG A+K N+ L+ + E L L H
Sbjct: 16 ILGQGATANVFRGR---------HKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNH 66
Query: 187 PNLVKLIGCCIEDDQR--LLVYEFMPRGSLENHLFRRS--LPLPWSIRMKIALDAAKGLA 242
N+VKL E R +L+ EF P GSL L S LP S + + D G+
Sbjct: 67 KNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMN 126
Query: 243 FLHEEAEKPVIYRDFKTSNILL----DGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 298
L E +++R+ K NI+ DG+ KL+DFG A++ E D+ VS + GT
Sbjct: 127 HLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE-LEDDEQFVS--LYGTEE 180
Query: 299 YAAPEYVMTGHLT--------AKSDVYSFGVVLLEMLTG 329
Y P+ L A D++S GV TG
Sbjct: 181 YLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 95/215 (44%), Gaps = 33/215 (15%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHP 187
++G G FG VY+ + +G VA+K + LQ + E+ + L H
Sbjct: 40 VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQDKRFKNRELQIMRKLDHC 86
Query: 188 NLVKLIGCCI-----EDDQRL-LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALDAAK 239
N+V+L +D+ L LV +++P + H R LP +
Sbjct: 87 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 146
Query: 240 GLAFLHEEAEKPVIYRDFKTSNILLDGEYNA-KLSDFGLAKDGPEGDK--THVSTRVMGT 296
LA++H + +RD K N+LLD + KL DFG AK G+ +++ +R
Sbjct: 147 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY--- 200
Query: 297 YGYAAPEYVM-TGHLTAKSDVYSFGVVLLEMLTGR 330
Y APE + T+ DV+S G VL E+L G+
Sbjct: 201 --YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 92/223 (41%), Gaps = 28/223 (12%)
Query: 115 ELKSATKSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGH--- 171
E+++ + +P +G G +G V + V TG VA+K L + Q
Sbjct: 22 EVRAVYRDLQP---VGSGAYGAV---------CSAVDGRTGAKVAIKKL-YRPFQSELFA 68
Query: 172 KEWLAEVNYLGGLIHPNLVKLIGCCIED---DQRLLVYEFMPRGSLENHLFRRSLPLPWS 228
K E+ L + H N++ L+ D D Y MP + + L
Sbjct: 69 KRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGED 128
Query: 229 IRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTH 288
+ KGL ++H +I+RD K N+ ++ + K+ DFGLA+
Sbjct: 129 RIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGX 185
Query: 289 VSTRVMGTYGYAAPEYVMTG-HLTAKSDVYSFGVVLLEMLTGR 330
V TR Y APE ++ T D++S G ++ EM+TG+
Sbjct: 186 VVTR-----WYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 95/215 (44%), Gaps = 33/215 (15%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHP 187
++G G FG VY+ + +G VA+K + LQ + E+ + L H
Sbjct: 32 VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQDKRFKNRELQIMRKLDHC 78
Query: 188 NLVKLIGCCI-----EDDQRL-LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALDAAK 239
N+V+L +D+ L LV +++P + H R LP +
Sbjct: 79 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 138
Query: 240 GLAFLHEEAEKPVIYRDFKTSNILLDGEYNA-KLSDFGLAKDGPEGDK--THVSTRVMGT 296
LA++H + +RD K N+LLD + KL DFG AK G+ +++ +R
Sbjct: 139 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY--- 192
Query: 297 YGYAAPEYVM-TGHLTAKSDVYSFGVVLLEMLTGR 330
Y APE + T+ DV+S G VL E+L G+
Sbjct: 193 --YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 239 KGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 298
+GL ++H +I+RD K SN+ ++ + ++ DFGLA+ E +V+TR
Sbjct: 134 RGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATR-----W 185
Query: 299 YAAPEYVMTG-HLTAKSDVYSFGVVLLEMLTGR 330
Y APE ++ H D++S G ++ E+L G+
Sbjct: 186 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 9/93 (9%)
Query: 239 KGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 298
+GL ++H +I+RD K SN+ ++ + ++ DFGLA+ E +V+TR
Sbjct: 142 RGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----W 193
Query: 299 YAAPEYVMTG-HLTAKSDVYSFGVVLLEMLTGR 330
Y APE ++ H D++S G ++ E+L G+
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 93/213 (43%), Gaps = 29/213 (13%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHP 187
++G G FG VY+ + +G VA+K + LQG E+ + L H
Sbjct: 27 VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQGKAFKNRELQIMRKLDHC 73
Query: 188 NLVKLIGCCI-----EDDQRL-LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALDAAK 239
N+V+L +D+ L LV +++P + H R LP +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 240 GLAFLHEEAEKPVIYRDFKTSNILLDGEYNA-KLSDFGLAKDGPEGDKTHVSTRVMGTYG 298
LA++H + +RD K N+LLD + KL DFG AK G+ + + +
Sbjct: 134 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRY 187
Query: 299 YAAPEYVM-TGHLTAKSDVYSFGVVLLEMLTGR 330
Y APE + T+ DV+S G VL E+L G+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 91/210 (43%), Gaps = 21/210 (10%)
Query: 127 CLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIH 186
+LG+G +G VY G N +A+K + + + E+ L H
Sbjct: 28 VVLGKGTYGIVYAGRDLSNQVR---------IAIKEIPERDSRYSQPLHEEIALHKHLKH 78
Query: 187 PNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL---DAAKGLAF 243
N+V+ +G E+ + E +P GSL L + PL + I +GL +
Sbjct: 79 KNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDN-EQTIGFYTKQILEGLKY 137
Query: 244 LHEEAEKPVIYRDFKTSNILLDGEYNA-KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAP 302
LH+ +++RD K N+L++ K+SDFG +K + GT Y AP
Sbjct: 138 LHDNQ---IVHRDIKGDNVLINTYSGVLKISDFGTSKR--LAGINPCTETFTGTLQYMAP 192
Query: 303 EYVMTG--HLTAKSDVYSFGVVLLEMLTGR 330
E + G +D++S G ++EM TG+
Sbjct: 193 EIIDKGPRGYGKAADIWSLGCTIIEMATGK 222
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 93/213 (43%), Gaps = 29/213 (13%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHP 187
++G G FG VY+ + +G VA+K + LQ + E+ + L H
Sbjct: 46 VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQDKRFKNRELQIMRKLDHC 92
Query: 188 NLVKLIGCCI-----EDDQRL-LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALDAAK 239
N+V+L +D+ L LV +++P + H R LP +
Sbjct: 93 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 152
Query: 240 GLAFLHEEAEKPVIYRDFKTSNILLDGEYNA-KLSDFGLAKDGPEGDKTHVSTRVMGTYG 298
LA++H + +RD K N+LLD + KL DFG AK G+ + + +
Sbjct: 153 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRY 206
Query: 299 YAAPEYVM-TGHLTAKSDVYSFGVVLLEMLTGR 330
Y APE + T+ DV+S G VL E+L G+
Sbjct: 207 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 93/213 (43%), Gaps = 29/213 (13%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHP 187
++G G FG VY+ + +G VA+K + LQ + E+ + L H
Sbjct: 35 VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQDKRFKNRELQIMRKLDHC 81
Query: 188 NLVKLIGCCI-----EDDQRL-LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALDAAK 239
N+V+L +D+ L LV +++P + H R LP +
Sbjct: 82 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 141
Query: 240 GLAFLHEEAEKPVIYRDFKTSNILLDGEYNA-KLSDFGLAKDGPEGDKTHVSTRVMGTYG 298
LA++H + +RD K N+LLD + KL DFG AK G+ + + +
Sbjct: 142 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRY 195
Query: 299 YAAPEYVM-TGHLTAKSDVYSFGVVLLEMLTGR 330
Y APE + T+ DV+S G VL E+L G+
Sbjct: 196 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 68/149 (45%), Gaps = 21/149 (14%)
Query: 187 PNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKIALDAAKGLAF 243
P LVKL ++ +V E+ P G + +HL R S P +I L +
Sbjct: 102 PFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFEY 157
Query: 244 LHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGYA 300
LH +IYRD K N+L+D + K++DFG AK V R + GT Y
Sbjct: 158 LHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAK--------RVKGRTWXLCGTPEYL 206
Query: 301 APEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
APE +++ D ++ GV++ EM G
Sbjct: 207 APEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 88/210 (41%), Gaps = 33/210 (15%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEW---LAEVNYLGGLI 185
LG G FG V TG A+K L+ + K+ L E L +
Sbjct: 49 LGTGSFGRV---------MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKIALDAAKGLA 242
P LVKL ++ +V E+ P G + +HL R S P +I L
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFE 155
Query: 243 FLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGY 299
+LH +IYRD K N+++D + +++DFG AK V R + GT Y
Sbjct: 156 YLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEY 204
Query: 300 AAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
APE +++ D ++ GV++ EM G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 95/215 (44%), Gaps = 33/215 (15%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHP 187
++G G FG VY+ + +G VA+K + LQ + E+ + L H
Sbjct: 27 VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQDKRFKNRELQIMRKLDHC 73
Query: 188 NLVKLIGCCI-----EDDQRL-LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALDAAK 239
N+V+L +D+ L LV +++P + H R LP +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 240 GLAFLHEEAEKPVIYRDFKTSNILLDGEYNA-KLSDFGLAKDGPEGDK--THVSTRVMGT 296
LA++H + +RD K N+LLD + KL DFG AK G+ +++ +R
Sbjct: 134 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY--- 187
Query: 297 YGYAAPEYVM-TGHLTAKSDVYSFGVVLLEMLTGR 330
Y APE + T+ DV+S G VL E+L G+
Sbjct: 188 --YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 93/213 (43%), Gaps = 29/213 (13%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHP 187
++G G FG VY+ + +G VA+K + LQ + E+ + L H
Sbjct: 39 VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQDKRFKNRELQIMRKLDHC 85
Query: 188 NLVKLIGCCI-----EDDQRL-LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALDAAK 239
N+V+L +D+ L LV +++P + H R LP +
Sbjct: 86 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 145
Query: 240 GLAFLHEEAEKPVIYRDFKTSNILLDGEYNA-KLSDFGLAKDGPEGDKTHVSTRVMGTYG 298
LA++H + +RD K N+LLD + KL DFG AK G+ + + +
Sbjct: 146 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRY 199
Query: 299 YAAPEYVM-TGHLTAKSDVYSFGVVLLEMLTGR 330
Y APE + T+ DV+S G VL E+L G+
Sbjct: 200 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 93/213 (43%), Gaps = 29/213 (13%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHP 187
++G G FG VY+ + +G VA+K + LQ + E+ + L H
Sbjct: 27 VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQDKRFKNRELQIMRKLDHC 73
Query: 188 NLVKLIGCCI-----EDDQRL-LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALDAAK 239
N+V+L +D+ L LV +++P + H R LP +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 240 GLAFLHEEAEKPVIYRDFKTSNILLDGEYNA-KLSDFGLAKDGPEGDKTHVSTRVMGTYG 298
LA++H + +RD K N+LLD + KL DFG AK G+ + + +
Sbjct: 134 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRY 187
Query: 299 YAAPEYVM-TGHLTAKSDVYSFGVVLLEMLTGR 330
Y APE + T+ DV+S G VL E+L G+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 93/213 (43%), Gaps = 29/213 (13%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHP 187
++G G FG VY+ + +G VA+K + LQ + E+ + L H
Sbjct: 39 VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQDKRFKNRELQIMRKLDHC 85
Query: 188 NLVKLIGCCI-----EDDQRL-LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALDAAK 239
N+V+L +D+ L LV +++P + H R LP +
Sbjct: 86 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 145
Query: 240 GLAFLHEEAEKPVIYRDFKTSNILLDGEYNA-KLSDFGLAKDGPEGDKTHVSTRVMGTYG 298
LA++H + +RD K N+LLD + KL DFG AK G+ + + +
Sbjct: 146 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRY 199
Query: 299 YAAPEYVM-TGHLTAKSDVYSFGVVLLEMLTGR 330
Y APE + T+ DV+S G VL E+L G+
Sbjct: 200 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 93/213 (43%), Gaps = 29/213 (13%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHP 187
++G G FG VY+ + +G VA+K + LQ + E+ + L H
Sbjct: 28 VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQDKRFKNRELQIMRKLDHC 74
Query: 188 NLVKLIGCCI-----EDDQRL-LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALDAAK 239
N+V+L +D+ L LV +++P + H R LP +
Sbjct: 75 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 134
Query: 240 GLAFLHEEAEKPVIYRDFKTSNILLDGEYNA-KLSDFGLAKDGPEGDKTHVSTRVMGTYG 298
LA++H + +RD K N+LLD + KL DFG AK G+ + + +
Sbjct: 135 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRY 188
Query: 299 YAAPEYVM-TGHLTAKSDVYSFGVVLLEMLTGR 330
Y APE + T+ DV+S G VL E+L G+
Sbjct: 189 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 87/210 (41%), Gaps = 33/210 (15%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEW---LAEVNYLGGLI 185
LG G FG V TG A+K L+ + K+ L E L +
Sbjct: 50 LGTGSFGRV---------MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKIALDAAKGLA 242
P L KL ++ +V E+ P G + +HL R S P +I L
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFE 156
Query: 243 FLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGY 299
+LH +IYRD K N+++D + K++DFG AK V R + GT Y
Sbjct: 157 YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCGTPEY 205
Query: 300 AAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
APE +++ D ++ GV++ EM G
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 89/208 (42%), Gaps = 18/208 (8%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKT--LNHDGLQGHKEWLAEVNYLGGLIH 186
+GEG +G V+K T VA+K L+ D L E+ L L H
Sbjct: 10 IGEGTYGTVFKA---------KNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH 60
Query: 187 PNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHE 246
N+V+L D + LV+EF + L+ + + L I KGL F H
Sbjct: 61 KNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHS 119
Query: 247 EAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM 306
+ V++RD K N+L++ KL++FGLA+ G + + T Y P+ +
Sbjct: 120 ---RNVLHRDLKPQNLLINRNGELKLANFGLAR--AFGIPVRCYSAEVVTLWYRPPDVLF 174
Query: 307 TGHLTAKS-DVYSFGVVLLEMLTGRRSM 333
L + S D++S G + E+ R +
Sbjct: 175 GAKLYSTSIDMWSAGCIFAELANAGRPL 202
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 93/213 (43%), Gaps = 29/213 (13%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHP 187
++G G FG VY+ + +G VA+K + LQ + E+ + L H
Sbjct: 27 VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQDKRFKNRELQIMRKLDHC 73
Query: 188 NLVKLIGCCI-----EDDQRL-LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALDAAK 239
N+V+L +D+ L LV +++P + H R LP +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 240 GLAFLHEEAEKPVIYRDFKTSNILLDGEYNA-KLSDFGLAKDGPEGDKTHVSTRVMGTYG 298
LA++H + +RD K N+LLD + KL DFG AK G+ + + +
Sbjct: 134 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRY 187
Query: 299 YAAPEYVM-TGHLTAKSDVYSFGVVLLEMLTGR 330
Y APE + T+ DV+S G VL E+L G+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 87/210 (41%), Gaps = 33/210 (15%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEW---LAEVNYLGGLI 185
LG G FG V TG A+K L+ + K+ L E L +
Sbjct: 50 LGTGSFGRV---------MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKIALDAAKGLA 242
P L KL ++ +V E+ P G + +HL R S P +I L
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFE 156
Query: 243 FLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGY 299
+LH +IYRD K N+++D + K++DFG AK V R + GT Y
Sbjct: 157 YLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCGTPEY 205
Query: 300 AAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
APE +++ D ++ GV++ EM G
Sbjct: 206 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 93/213 (43%), Gaps = 29/213 (13%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHP 187
++G G FG VY+ + +G VA+K + LQ + E+ + L H
Sbjct: 31 VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQDKRFKNRELQIMRKLDHC 77
Query: 188 NLVKLIGCCI-----EDDQRL-LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALDAAK 239
N+V+L +D+ L LV +++P + H R LP +
Sbjct: 78 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 137
Query: 240 GLAFLHEEAEKPVIYRDFKTSNILLDGEYNA-KLSDFGLAKDGPEGDKTHVSTRVMGTYG 298
LA++H + +RD K N+LLD + KL DFG AK G+ + + +
Sbjct: 138 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRY 191
Query: 299 YAAPEYVM-TGHLTAKSDVYSFGVVLLEMLTGR 330
Y APE + T+ DV+S G VL E+L G+
Sbjct: 192 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 88/204 (43%), Gaps = 32/204 (15%)
Query: 135 GCVYKGWINMNGTATVKPGTGLPVAVKTLNHDG-------LQGHKEWLAEVNYLGGLIHP 187
GC+ G + A + G PV +K L H G +++LAEV +HP
Sbjct: 86 GCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEV------VHP 139
Query: 188 NLVKLIGCCIEDDQR-----LLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLA 242
++V++ D+ +V E++ SL+ + LP + + L+ L+
Sbjct: 140 SIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRS---KGQKLPVAEAIAYLLEILPALS 196
Query: 243 FLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAP 302
+LH ++Y D K NI+L E KL D G + + + GT G+ AP
Sbjct: 197 YLHSIG---LVYNDLKPENIMLT-EEQLKLIDLGAVS------RINSFGYLYGTPGFQAP 246
Query: 303 EYVMTGHLTAKSDVYSFGVVLLEM 326
E V TG T +D+Y+ G L +
Sbjct: 247 EIVRTGP-TVATDIYTVGRTLAAL 269
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 89/231 (38%), Gaps = 36/231 (15%)
Query: 115 ELKSATKSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGH--- 171
EL + + + + G +G V G G+PVA+K + + G
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAG----------VDSEGIPVAIKRVFNTVSDGRTVN 65
Query: 172 --------KEWLAEVNYLGGLIHPNLVKLIGCCIEDDQ-----RLLVYEFMPRGSLENHL 218
K L E+ L HPN++ L + ++ LV E M R L +
Sbjct: 66 ILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVI 124
Query: 219 FRRSLPLPWSIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLA 278
+ + + GL LHE V++RD NILL + + DF LA
Sbjct: 125 HDQRIVISPQHIQYFMYHILLGLHVLHEAG---VVHRDLHPGNILLADNNDITICDFNLA 181
Query: 279 K-DGPEGDKTHVSTRVMGTYGYAAPEYVMTGH-LTAKSDVYSFGVVLLEML 327
+ D + +KTH T Y APE VM T D++S G V+ EM
Sbjct: 182 REDTADANKTHYVTH----RWYRAPELVMQFKGFTKLVDMWSAGCVMAEMF 228
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 91/213 (42%), Gaps = 29/213 (13%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHP 187
++G G FG VY+ + +G VA+K + LQ + E+ + L H
Sbjct: 27 VIGNGSFGVVYQAKLCDSGEL---------VAIKKV----LQDKRFKNRELQIMRKLDHC 73
Query: 188 NLVKLIGCCIEDDQRL------LVYEFMPRG--SLENHLFRRSLPLPWSIRMKIALDAAK 239
N+V+L ++ LV +++P + H R LP +
Sbjct: 74 NIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 240 GLAFLHEEAEKPVIYRDFKTSNILLDGEYNA-KLSDFGLAKDGPEGDKTHVSTRVMGTYG 298
LA++H + +RD K N+LLD + KL DFG AK G+ + + +
Sbjct: 134 SLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP---NVSXICSRY 187
Query: 299 YAAPEYVM-TGHLTAKSDVYSFGVVLLEMLTGR 330
Y APE + T+ DV+S G VL E+L G+
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 13/107 (12%)
Query: 231 MKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGL--AKDGPEGDKTH 288
+ I + A+ + FLH K +++RD K SNI + K+ DFGL A D E ++T
Sbjct: 167 LHIFIQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 289 VSTR--------VMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEML 327
++ +GT Y +PE + + + K D++S G++L E+L
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 91/210 (43%), Gaps = 21/210 (10%)
Query: 127 CLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIH 186
+LG+G +G VY G N +A+K + + + E+ L H
Sbjct: 14 VVLGKGTYGIVYAGRDLSNQVR---------IAIKEIPERDSRYSQPLHEEIALHKHLKH 64
Query: 187 PNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIAL---DAAKGLAF 243
N+V+ +G E+ + E +P GSL L + PL + I +GL +
Sbjct: 65 KNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDN-EQTIGFYTKQILEGLKY 123
Query: 244 LHEEAEKPVIYRDFKTSNILLDGEYNA-KLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAP 302
LH+ +++RD K N+L++ K+SDFG +K + GT Y AP
Sbjct: 124 LHDNQ---IVHRDIKGDNVLINTYSGVLKISDFGTSKR--LAGINPCTETFTGTLQYMAP 178
Query: 303 EYVMTG--HLTAKSDVYSFGVVLLEMLTGR 330
E + G +D++S G ++EM TG+
Sbjct: 179 EIIDKGPRGYGKAADIWSLGCTIIEMATGK 208
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 89/231 (38%), Gaps = 36/231 (15%)
Query: 115 ELKSATKSFRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGH--- 171
EL + + + + G +G V G G+PVA+K + + G
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAG----------VDSEGIPVAIKRVFNTVSDGRTVN 65
Query: 172 --------KEWLAEVNYLGGLIHPNLVKLIGCCIEDDQ-----RLLVYEFMPRGSLENHL 218
K L E+ L HPN++ L + ++ LV E M R L +
Sbjct: 66 ILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVI 124
Query: 219 FRRSLPLPWSIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLA 278
+ + + GL LHE V++RD NILL + + DF LA
Sbjct: 125 HDQRIVISPQHIQYFMYHILLGLHVLHEAG---VVHRDLHPGNILLADNNDITICDFNLA 181
Query: 279 K-DGPEGDKTHVSTRVMGTYGYAAPEYVMTGH-LTAKSDVYSFGVVLLEML 327
+ D + +KTH T Y APE VM T D++S G V+ EM
Sbjct: 182 REDTADANKTHYVTH----RWYRAPELVMQFKGFTKLVDMWSAGCVMAEMF 228
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 80/159 (50%), Gaps = 12/159 (7%)
Query: 177 EVNYLGGLIHPNLVKLIGCCIE--DDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 234
E+ L L HPN+VKL+ + +D +V+E + +G + + PL
Sbjct: 86 EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK--PLSEDQARFYF 143
Query: 235 LDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVM 294
D KG+ +LH + +I+RD K SN+L+ + + K++DFG++ + D +T +
Sbjct: 144 QDLIKGIEYLHYQK---IIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNT--V 198
Query: 295 GTYGYAAPEYVMTGH--LTAKS-DVYSFGVVLLEMLTGR 330
GT + APE + + K+ DV++ GV L + G+
Sbjct: 199 GTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 84/207 (40%), Gaps = 27/207 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEW---LAEVNYLGGLI 185
LG G FG V TG A+K L+ + K+ L E L +
Sbjct: 50 LGTGSFGRV---------MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLH 245
P L KL ++ +V E+ P G + +HL R R A +LH
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH 159
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGYAAP 302
+IYRD K N+++D + K++DFG AK V R + GT Y AP
Sbjct: 160 S---LDLIYRDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCGTPEYLAP 208
Query: 303 EYVMTGHLTAKSDVYSFGVVLLEMLTG 329
E +++ D ++ GV++ EM G
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 15/158 (9%)
Query: 175 LAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRM 231
L E L + P LVKL ++ +V E++ G + +HL R S P
Sbjct: 110 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 169
Query: 232 KIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVST 291
+I L +LH +IYRD K N+L+D + +++DFG AK T
Sbjct: 170 QIVLT----FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWT---- 218
Query: 292 RVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
+ GT Y APE +++ D ++ GV++ EM G
Sbjct: 219 -LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 92/211 (43%), Gaps = 29/211 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNH--DGLQGHKEWLAEVNYLGGLIH 186
+G G +G V A TG VAVK L+ + K E+ L + H
Sbjct: 30 VGSGAYGSV---------CAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKH 80
Query: 187 PNLVKLIGCCI------EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
N++ L+ E + LV M G+ N++ + ++ I +G
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLI-YQILRG 137
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYA 300
L ++H +I+RD K SN+ ++ + K+ DF LA+ + +V+TR Y
Sbjct: 138 LKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVATR-----WYR 189
Query: 301 APEYVMTG-HLTAKSDVYSFGVVLLEMLTGR 330
APE ++ H D++S G ++ E+LTGR
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 254 YRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTAK 313
+RD K NIL+ + A L DFG+A + T + V GT Y APE H T +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTV-GTLYYXAPERFSESHATYR 215
Query: 314 SDVYSFGVVLLEMLTG 329
+D+Y+ VL E LTG
Sbjct: 216 ADIYALTCVLYECLTG 231
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 88/210 (41%), Gaps = 28/210 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQG--HKEWLAEVNYLGGLIH 186
LG+G F V + +K TG A K +N L H++ E L H
Sbjct: 12 LGKGAFSVVRR---------CMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 187 PNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHE 246
PN+V+L E+ LV++ + G L + R DA+ + + E
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVARE--------YYSEADASHCIQQILE 114
Query: 247 EAEKP----VIYRDFKTSNILLDGEYN---AKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 299
+++RD K N+LL + KL+DFGLA + +GD+ GT GY
Sbjct: 115 SVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIE-VQGDQ-QAWFGFAGTPGY 172
Query: 300 AAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
+PE + D+++ GV+L +L G
Sbjct: 173 LSPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 94/220 (42%), Gaps = 36/220 (16%)
Query: 126 ECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLI 185
EC+ G+G +G V++G G VAVK + + K W E ++
Sbjct: 14 ECV-GKGRYGEVWRG-----------SWQGENVAVKIFSS---RDEKSWFRETELYNTVM 58
Query: 186 --HPNLVKLIGCCI----EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAK 239
H N++ I + Q L+ + GSL ++L +L +R I L A
Sbjct: 59 LRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLR--IVLSIAS 116
Query: 240 GLAFLHEEAE----KPVI-YRDFKTSNILLDGEYNAKLSDFGLA-KDGPEGDKTHVSTR- 292
GLA LH E KP I +RD K+ NIL+ ++D GLA ++ V
Sbjct: 117 GLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNP 176
Query: 293 VMGTYGYAAPEY------VMTGHLTAKSDVYSFGVVLLEM 326
+GT Y APE V + D+++FG+VL E+
Sbjct: 177 RVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 94/220 (42%), Gaps = 36/220 (16%)
Query: 126 ECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLI 185
EC+ G+G +G V++G G VAVK + + K W E ++
Sbjct: 14 ECV-GKGRYGEVWRG-----------SWQGENVAVKIFSS---RDEKSWFRETELYNTVM 58
Query: 186 --HPNLVKLIGCCI----EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAK 239
H N++ I + Q L+ + GSL ++L +L +R I L A
Sbjct: 59 LRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLR--IVLSIAS 116
Query: 240 GLAFLHEEAE----KPVI-YRDFKTSNILLDGEYNAKLSDFGLA-KDGPEGDKTHVSTR- 292
GLA LH E KP I +RD K+ NIL+ ++D GLA ++ V
Sbjct: 117 GLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNP 176
Query: 293 VMGTYGYAAPEY------VMTGHLTAKSDVYSFGVVLLEM 326
+GT Y APE V + D+++FG+VL E+
Sbjct: 177 RVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 94/220 (42%), Gaps = 36/220 (16%)
Query: 126 ECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLI 185
EC+ G+G +G V++G G VAVK + + K W E ++
Sbjct: 43 ECV-GKGRYGEVWRG-----------SWQGENVAVKIFSS---RDEKSWFRETELYNTVM 87
Query: 186 --HPNLVKLIGCCI----EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAK 239
H N++ I + Q L+ + GSL ++L +L +R I L A
Sbjct: 88 LRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLR--IVLSIAS 145
Query: 240 GLAFLHEEAE----KPVI-YRDFKTSNILLDGEYNAKLSDFGLA-KDGPEGDKTHVSTR- 292
GLA LH E KP I +RD K+ NIL+ ++D GLA ++ V
Sbjct: 146 GLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNP 205
Query: 293 VMGTYGYAAPEY------VMTGHLTAKSDVYSFGVVLLEM 326
+GT Y APE V + D+++FG+VL E+
Sbjct: 206 RVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 88/210 (41%), Gaps = 28/210 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQG--HKEWLAEVNYLGGLIH 186
LG+G F V + VK G A K +N L H++ E L H
Sbjct: 30 LGKGAFSVVRR---------CVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 80
Query: 187 PNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHE 246
PN+V+L E+ L+++ + G L + R DA+ + + E
Sbjct: 81 PNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVARE--------YYSEADASHCIQQILE 132
Query: 247 EA----EKPVIYRDFKTSNILLDGEYN---AKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 299
+ V++RD K N+LL + KL+DFGLA + EG++ GT GY
Sbjct: 133 AVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIE-VEGEQ-QAWFGFAGTPGY 190
Query: 300 AAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
+PE + D+++ GV+L +L G
Sbjct: 191 LSPEVLRKDPYGKPVDLWACGVILYILLVG 220
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 93/213 (43%), Gaps = 30/213 (14%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLA------EVNYLG 182
LG G F V K + GTG A K + L + ++ EVN L
Sbjct: 13 LGSGQFAIVRK---------CRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILR 63
Query: 183 GLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIR-MKIALDAAKG 240
+ HPN++ L +L+ E + G L + L + SL + + +K LD G
Sbjct: 64 EIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILD---G 120
Query: 241 LAFLHEEAEKPVIYRDFKTSNI-LLDGEY---NAKLSDFGLAKDGPEGDKTHVSTRVMGT 296
+ +LH K + + D K NI LLD KL DFG+A G++ + GT
Sbjct: 121 VHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIFGT 174
Query: 297 YGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
+ APE V L ++D++S GV+ +L+G
Sbjct: 175 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 207
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 77/187 (41%), Gaps = 36/187 (19%)
Query: 225 LPWSIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGL------- 277
+P I KIA+ K L LH + VI+RD K SN+L++ K DFG+
Sbjct: 133 IPEDILGKIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYLVDD 190
Query: 278 -AKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTGRRSMDK- 335
AKD G K + + + PE G+ + KSD++S G+ +E+ R D
Sbjct: 191 VAKDIDAGCKPYXAPERIN------PELNQKGY-SVKSDIWSLGITXIELAILRFPYDSW 243
Query: 336 NRPNGE-HNLVEWARPQLGERRRFYRLIDPCLEGCFSIKGAEKTIQLAASCLNRDQKARP 394
P + +VE PQL + +D + CL ++ K RP
Sbjct: 244 GTPFQQLKQVVEEPSPQLPADKFSAEFVD-----------------FTSQCLKKNSKERP 286
Query: 395 RMSEVVE 401
E+ +
Sbjct: 287 TYPELXQ 293
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 95/213 (44%), Gaps = 30/213 (14%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHK------EWLAEVNYLG 182
LG G F V K + TGL A K + + + E EV+ L
Sbjct: 20 LGSGQFAIVKK---------CREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILR 70
Query: 183 GLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIR-MKIALDAAKG 240
++HPN++ L +L+ E + G L + L ++ SL + +K LD G
Sbjct: 71 QVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD---G 127
Query: 241 LAFLHEEAEKPVIYRDFKTSNI-LLDGEY---NAKLSDFGLAKDGPEGDKTHVSTRVMGT 296
+ +LH K + + D K NI LLD + KL DFGLA + +G + + GT
Sbjct: 128 VNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KNIFGT 181
Query: 297 YGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
+ APE V L ++D++S GV+ +L+G
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 97/243 (39%), Gaps = 45/243 (18%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNH--DGLQGHKEWLAEVNYLGGLI 185
L+G G +G VY + + N V A+K +N + L K L E+ L L
Sbjct: 35 LIGRGSYGYVYLAY-DKNANKNV--------AIKKVNRMFEDLIDCKRILREITILNRLK 85
Query: 186 HPNLVKLIGCCI-ED----DQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
+++L I ED D+ +V E S LF+ + L I + G
Sbjct: 86 SDYIIRLHDLIIPEDLLKFDELYIVLEIA--DSDLKKLFKTPIFLTEQHVKTILYNLLLG 143
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVS---------- 290
F+HE +I+RD K +N LL+ + + K+ DFGLA+ H+
Sbjct: 144 EKFIHESG---IIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENE 200
Query: 291 -------------TRVMGTYGYAAPEYVMTG-HLTAKSDVYSFGVVLLEMLTGRRSMDKN 336
T + T Y APE ++ + T D++S G + E+L +S N
Sbjct: 201 EPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKSHINN 260
Query: 337 RPN 339
N
Sbjct: 261 PTN 263
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 88/210 (41%), Gaps = 33/210 (15%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEW---LAEVNYLGGLI 185
LG G FG V TG A+K L+ + K+ L E L +
Sbjct: 49 LGTGSFGRV---------MLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKIALDAAKGLA 242
P LVKL ++ +V E++ G + +HL R S P +I L
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL----TFE 155
Query: 243 FLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTR---VMGTYGY 299
+LH +IYRD K N+L+D + +++DFG AK V R + GT Y
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEY 204
Query: 300 AAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
APE +++ D ++ GV++ EM G
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 92/219 (42%), Gaps = 32/219 (14%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNH-DGLQGHKEWLAEVNYLGGLIH 186
+LG+G V++G TG A+K N+ L+ + E L L H
Sbjct: 16 ILGQGATANVFRG---------RHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNH 66
Query: 187 PNLVKLIGCCIEDDQR--LLVYEFMPRGSLENHLFRRS--LPLPWSIRMKIALDAAKGLA 242
N+VKL E R +L+ EF P GSL L S LP S + + D G+
Sbjct: 67 KNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMN 126
Query: 243 FLHEEAEKPVIYRDFKTSNILL----DGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 298
L E +++R+ K NI+ DG+ KL+DFG A++ E D+ V + GT
Sbjct: 127 HLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE-LEDDEQFVX--LYGTEE 180
Query: 299 YAAPEYVMTGHLT--------AKSDVYSFGVVLLEMLTG 329
Y P+ L A D++S GV TG
Sbjct: 181 YLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 92/213 (43%), Gaps = 30/213 (14%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHK------EWLAEVNYLG 182
LG G F V K + GTG A K + L + E EVN L
Sbjct: 20 LGSGQFAIVRK---------CRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILR 70
Query: 183 GLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIR-MKIALDAAKG 240
+ HPN++ L +L+ E + G L + L + SL + + +K LD G
Sbjct: 71 EIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILD---G 127
Query: 241 LAFLHEEAEKPVIYRDFKTSNI-LLDGEY---NAKLSDFGLAKDGPEGDKTHVSTRVMGT 296
+ +LH K + + D K NI LLD KL DFG+A G++ + GT
Sbjct: 128 VHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIFGT 181
Query: 297 YGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
+ APE V L ++D++S GV+ +L+G
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 88/210 (41%), Gaps = 28/210 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQG--HKEWLAEVNYLGGLIH 186
LG+G F V + +K TG A K +N L H++ E L H
Sbjct: 12 LGKGAFSVVRR---------CMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 187 PNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHE 246
PN+V+L E+ LV++ + G L + R DA+ + + E
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVARE--------YYSEADASHCIQQILE 114
Query: 247 EAEKP----VIYRDFKTSNILLDGEYN---AKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 299
+++RD K N+LL + KL+DFGLA + +GD+ GT GY
Sbjct: 115 SVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIE-VQGDQ-QAWFGFAGTPGY 172
Query: 300 AAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
+PE + D+++ GV+L +L G
Sbjct: 173 LSPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 72/161 (44%), Gaps = 21/161 (13%)
Query: 175 LAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRM 231
L E L + P LVKL ++ +V E++ G + +HL R S P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 232 KIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVST 291
+I L +LH +IYRD K N+L+D + +++DFG AK V
Sbjct: 149 QIVL----TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKG 193
Query: 292 R---VMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
R + GT Y APE +++ D ++ GV++ EM G
Sbjct: 194 RTWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 72/161 (44%), Gaps = 21/161 (13%)
Query: 175 LAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRM 231
L E L + P LVKL ++ +V E++ G + +HL R S P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 232 KIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVST 291
+I L +LH +IYRD K N+L+D + +++DFG AK V
Sbjct: 149 QIVL----TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKG 193
Query: 292 R---VMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
R + GT Y APE +++ D ++ GV++ EM G
Sbjct: 194 RTWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 72/166 (43%), Gaps = 20/166 (12%)
Query: 123 FRPECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLG 182
R +L EGGF VY+ G+G A+K L + + ++ + EV ++
Sbjct: 30 LRVRRVLAEGGFAFVYEAQ---------DVGSGREYALKRLLSNEEEKNRAIIQEVCFMK 80
Query: 183 GLI-HPNLVKLIGCCI----EDDQ---RLLVYEFMPRGSLENHLFRRSL--PLPWSIRMK 232
L HPN+V+ E D L+ + +G L L + PL +K
Sbjct: 81 KLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLK 140
Query: 233 IALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLA 278
I + + +H + + P+I+RD K N+LL + KL DFG A
Sbjct: 141 IFYQTCRAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSA 185
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 72/161 (44%), Gaps = 21/161 (13%)
Query: 175 LAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRM 231
L E L + P LVKL ++ +V E++ G + +HL R S P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 232 KIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVST 291
+I L +LH +IYRD K N+L+D + +++DFG AK V
Sbjct: 149 QIVL----TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKG 193
Query: 292 R---VMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
R + GT Y APE +++ D ++ GV++ EM G
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 93/213 (43%), Gaps = 30/213 (14%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLA------EVNYLG 182
LG G F V K + GTG A K + L + ++ EVN L
Sbjct: 34 LGSGQFAIVRK---------CRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILR 84
Query: 183 GLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIR-MKIALDAAKG 240
+ HPN++ L +L+ E + G L + L + SL + + +K LD G
Sbjct: 85 EIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILD---G 141
Query: 241 LAFLHEEAEKPVIYRDFKTSNI-LLDGEY---NAKLSDFGLAKDGPEGDKTHVSTRVMGT 296
+ +LH K + + D K NI LLD KL DFG+A G++ + GT
Sbjct: 142 VHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIFGT 195
Query: 297 YGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
+ APE V L ++D++S GV+ +L+G
Sbjct: 196 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 228
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 15/137 (10%)
Query: 200 DQRLLVYEFMPRGSL---ENHLF----RRSLPLPWSIRMKIALDAAKGLAFLHEEAEKPV 252
D+ ++YE+M S+ + + F + +P + I +++H E K +
Sbjct: 116 DEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNE--KNI 173
Query: 253 IYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM--TGHL 310
+RD K SNIL+D KLSDFG ++ DK +R GTY + PE+ + +
Sbjct: 174 CHRDVKPSNILMDKNGRVKLSDFGESE--YMVDKKIKGSR--GTYEFMPPEFFSNESSYN 229
Query: 311 TAKSDVYSFGVVLLEML 327
AK D++S G+ L M
Sbjct: 230 GAKVDIWSLGICLYVMF 246
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 73/158 (46%), Gaps = 15/158 (9%)
Query: 177 EVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLP--WSIRMKIA 234
E+ L + H N+V L LV + + G L + + R + S+ ++
Sbjct: 56 EIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQV 115
Query: 235 LDAAKGLAFLHEEAEKPVIYRDFKTSNIL-LDGEYNAKL--SDFGLAKDGPEGDKTHVST 291
L A K +LHE +++RD K N+L L E N+K+ +DFGL+K G + +
Sbjct: 116 LSAVK---YLHENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG----IMS 165
Query: 292 RVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
GT GY APE + + D +S GV+ +L G
Sbjct: 166 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCG 203
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 72/161 (44%), Gaps = 21/161 (13%)
Query: 175 LAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRM 231
L E L + P LVKL ++ +V E++ G + +HL R S P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 232 KIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVST 291
+I L +LH +IYRD K N+L+D + +++DFG AK V
Sbjct: 149 QIVL----TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKG 193
Query: 292 R---VMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
R + GT Y APE +++ D ++ GV++ EM G
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 72/161 (44%), Gaps = 21/161 (13%)
Query: 175 LAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRM 231
L E L + P LVKL ++ +V E++ G + +HL R S P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 232 KIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVST 291
+I L +LH +IYRD K N+L+D + +++DFG AK V
Sbjct: 149 QIVL----TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKG 193
Query: 292 R---VMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
R + GT Y APE +++ D ++ GV++ EM G
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 72/161 (44%), Gaps = 21/161 (13%)
Query: 175 LAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRM 231
L E L + P LVKL ++ +V E++ G + +HL R S P
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 232 KIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVST 291
+I L +LH +IYRD K N+L+D + +++DFG AK V
Sbjct: 150 QIVL----TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKG 194
Query: 292 R---VMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
R + GT Y APE +++ D ++ GV++ EM G
Sbjct: 195 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 72/161 (44%), Gaps = 21/161 (13%)
Query: 175 LAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRM 231
L E L + P LVKL ++ +V E++ G + +HL R S P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 232 KIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVST 291
+I L +LH +IYRD K N+L+D + +++DFG AK V
Sbjct: 149 QIVL----TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKG 193
Query: 292 R---VMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
R + GT Y APE +++ D ++ GV++ EM G
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 72/161 (44%), Gaps = 21/161 (13%)
Query: 175 LAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRM 231
L E L + P LVKL ++ +V E++ G + +HL R S P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 232 KIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVST 291
+I L +LH +IYRD K N+L+D + +++DFG AK V
Sbjct: 149 QIVL----TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKG 193
Query: 292 R---VMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
R + GT Y APE +++ D ++ GV++ EM G
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 69/158 (43%), Gaps = 15/158 (9%)
Query: 175 LAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 234
L E L + P LVKL ++ +V E++ G + +HL R R A
Sbjct: 110 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YA 168
Query: 235 LDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTR-- 292
+LH +IYRD K N+L+D + +++DFG AK V R
Sbjct: 169 AQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTW 217
Query: 293 -VMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
+ GT Y APE +++ D ++ GV++ EM G
Sbjct: 218 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 14/150 (9%)
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIR--MKIALDAAKGLAF 243
HPN++ L + +V E M G L + + R+ +S R + K + +
Sbjct: 75 HPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKF---FSEREASAVLFTITKTVEY 131
Query: 244 LHEEAEKPVIYRDFKTSNILLDGEY----NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 299
LH + V++RD K SNIL E + ++ DFG AK + ++ T +
Sbjct: 132 LHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTP--CYTANF 186
Query: 300 AAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
APE + A D++S GV+L MLTG
Sbjct: 187 VAPEVLERQGYDAACDIWSLGVLLYTMLTG 216
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 69/158 (43%), Gaps = 15/158 (9%)
Query: 175 LAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 234
L E L + P LVKL ++ +V E++ G + +HL R R A
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YA 147
Query: 235 LDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTR-- 292
+LH +IYRD K N+L+D + +++DFG AK V R
Sbjct: 148 AQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTW 196
Query: 293 -VMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
+ GT Y APE +++ D ++ GV++ EM G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 110/267 (41%), Gaps = 44/267 (16%)
Query: 153 GTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPNLVKLIGCCIEDD--QRLLVYEFMP 210
G + V V + + +++ E L HPN++ ++G C L+ +MP
Sbjct: 33 GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMP 92
Query: 211 RGSLENHLFR-RSLPLPWSIRMKIALDAAKGLAFLHEEAEKPVIYRD-FKTSNILLDGEY 268
GSL N L + + S +K ALD A+G+AFLH +P+I R + ++++D +
Sbjct: 93 YGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLH--TLEPLIPRHALNSRSVMIDEDM 150
Query: 269 NAKLS--DFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVM-----TGHLTAKSDVYSFGV 321
A++S D + P M + APE + T +A D++SF V
Sbjct: 151 TARISMADVKFSFQSPGR---------MYAPAWVAPEALQKKPEDTNRRSA--DMWSFAV 199
Query: 322 VLLEMLTGRRSMD--KNRPNGEHNLVEWARPQLGERRRFYRLIDPCLEGCFSIKGAEKTI 379
+L E++T N G +E RP I P + S
Sbjct: 200 LLWELVTREVPFADLSNMEIGMKVALEGLRPT----------IPPGISPHVS-------- 241
Query: 380 QLAASCLNRDQKARPRMSEVVEALKPL 406
+L C+N D RP+ +V L+ +
Sbjct: 242 KLMKICMNEDPAKRPKFDMIVPILEKM 268
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 69/158 (43%), Gaps = 15/158 (9%)
Query: 175 LAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 234
L E L + P LVKL ++ +V E++ G + +HL R R A
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YA 147
Query: 235 LDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTR-- 292
+LH +IYRD K N+L+D + +++DFG AK V R
Sbjct: 148 AQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTW 196
Query: 293 -VMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
+ GT Y APE +++ D ++ GV++ EM G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 11/152 (7%)
Query: 184 LIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRS---LPLPWSIRMKIALDAAKG 240
L HP++V+L+ D +V+EFM L + +R+ ++ +
Sbjct: 83 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA 142
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNA---KLSDFGLAKDGPEGDKTHVSTRVMGTY 297
L + H+ +I+RD K N+LL + N+ KL DFG+A G+ V+ +GT
Sbjct: 143 LRYCHDNN---IIHRDVKPENVLLASKENSAPVKLGDFGVAIQ--LGESGLVAGGRVGTP 197
Query: 298 GYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
+ APE V DV+ GV+L +L+G
Sbjct: 198 HFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 88/204 (43%), Gaps = 8/204 (3%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG+G F ++KG G T V +K L+ + + + + L H +
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHET--EVLLKVLDKAHRNYSESFFEAASMMSKLSHKH 73
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEEA 248
LV G C+ D+ +LV EF+ GSL+ +L + + ++++A A + FL E
Sbjct: 74 LVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENT 133
Query: 249 EKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTR--VMGTYGYAAPEYVM 306
+I+ + NILL E + K + K G V + + + PE +
Sbjct: 134 ---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECIE 190
Query: 307 T-GHLTAKSDVYSFGVVLLEMLTG 329
+L +D +SFG L E+ +G
Sbjct: 191 NPKNLNLATDKWSFGTTLWEICSG 214
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 69/158 (43%), Gaps = 15/158 (9%)
Query: 175 LAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 234
L E L + P LVKL ++ +V E++ G + +HL R R A
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YA 147
Query: 235 LDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTR-- 292
+LH +IYRD K N+L+D + +++DFG AK V R
Sbjct: 148 AQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTW 196
Query: 293 -VMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
+ GT Y APE +++ D ++ GV++ EM G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 69/158 (43%), Gaps = 15/158 (9%)
Query: 175 LAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 234
L E L + P LVKL ++ +V E++ G + +HL R R A
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARF-YA 147
Query: 235 LDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTR-- 292
+LH +IYRD K N+L+D + +++DFG AK V R
Sbjct: 148 AQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTW 196
Query: 293 -VMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
+ GT Y APE +++ D ++ GV++ EM G
Sbjct: 197 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 69/158 (43%), Gaps = 15/158 (9%)
Query: 175 LAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 234
L E L + P LVKL ++ +V E++ G + +HL R R A
Sbjct: 84 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF-YA 142
Query: 235 LDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTR-- 292
+LH +IYRD K N+L+D + +++DFG AK V R
Sbjct: 143 AQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTW 191
Query: 293 -VMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
+ GT Y APE +++ D ++ GV++ EM G
Sbjct: 192 XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 96/218 (44%), Gaps = 37/218 (16%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLI--H 186
+G+G +G V+ G G VAVK W E ++ H
Sbjct: 45 IGKGRYGEVWMG-----------KWRGEKVAVKVF---FTTEEASWFRETEIYQTVLMRH 90
Query: 187 PNLVKLIGCCIEDD----QRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLA 242
N++ I I+ Q L+ ++ GSL ++L +S L +K+A + GL
Sbjct: 91 ENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYL--KSTTLDAKSMLKLAYSSVSGLC 148
Query: 243 FLHEEAE----KPVI-YRDFKTSNILLDGEYNAKLSDFGLA-KDGPEGDKTHV--STRVM 294
LH E KP I +RD K+ NIL+ ++D GLA K + ++ + +TRV
Sbjct: 149 HLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRV- 207
Query: 295 GTYGYAAPEY----VMTGHLTA--KSDVYSFGVVLLEM 326
GT Y PE + H + +D+YSFG++L E+
Sbjct: 208 GTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 69/145 (47%), Gaps = 21/145 (14%)
Query: 200 DQRLLVYEFMPRGSLENHLFRRSL--PLPWSIRMKIALDAAKGLAFLHEEAEKPVIYRDF 257
D+ LV+E M GS+ +H+ +R L S+ + D A L FLH K + +RD
Sbjct: 84 DRFYLVFEKMRGGSILSHIHKRRHFNELEASV---VVQDVASALDFLH---NKGIAHRDL 137
Query: 258 KTSNILLDGEYN---AKLSDFGLAKD-GPEGDKTHVSTRVM----GTYGYAAPEYVMTGH 309
K NIL + K+ DFGL GD + +ST + G+ Y APE V
Sbjct: 138 KPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFS 197
Query: 310 LTA-----KSDVYSFGVVLLEMLTG 329
A + D++S GV+L +L+G
Sbjct: 198 EEASIYDKRCDLWSLGVILYILLSG 222
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 72/161 (44%), Gaps = 21/161 (13%)
Query: 175 LAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRM 231
L E L + P LVKL ++ +V E++ G + +HL R S P
Sbjct: 76 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 135
Query: 232 KIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVST 291
+I L +LH +IYRD K N+L+D + +++DFG AK V
Sbjct: 136 QIVL----TFEYLHS---LDLIYRDLKPENLLIDEQGYIQVTDFGFAK--------RVKG 180
Query: 292 R---VMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
R + GT Y APE +++ D ++ GV++ EM G
Sbjct: 181 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 89/211 (42%), Gaps = 30/211 (14%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQG--HKEWLAEVNYLGGLIH 186
+G+G F V + VK TG A K +N L H++ E L H
Sbjct: 12 IGKGAFSVVRR---------CVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 187 PNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGL----- 241
N+V+L E+ LV++ + G L + R DA+ +
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVARE--------YYSEADASHCIQQILE 114
Query: 242 AFLHEEAEKPVIYRDFKTSNILLDGEYN---AKLSDFGLAKDGPEGDKTHVSTRVMGTYG 298
A LH + V++RD K N+LL + KL+DFGLA + +GD+ GT G
Sbjct: 115 AVLHCH-QMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIE-VQGDQ-QAWFGFAGTPG 171
Query: 299 YAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
Y +PE + D+++ GV+L +L G
Sbjct: 172 YLSPEVLRKEAYGKPVDIWACGVILYILLVG 202
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 84/205 (40%), Gaps = 20/205 (9%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LGEG F K V + AVK ++ ++ + + G HPN
Sbjct: 19 LGEGSFSICRK---------CVHKKSNQAFAVKIISKRMEANTQKEITALKLCEG--HPN 67
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEEA 248
+VKL + LV E + G L + ++ + I ++ +H+
Sbjct: 68 IVKLHEVFHDQLHTFLVMELLNGGELFERI-KKKKHFSETEASYIMRKLVSAVSHMHDVG 126
Query: 249 EKPVIYRDFKTSNILLDGEYN---AKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYV 305
V++RD K N+L E + K+ DFG A+ P D + T T YAAPE +
Sbjct: 127 ---VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPP-DNQPLKTPCF-TLHYAAPELL 181
Query: 306 MTGHLTAKSDVYSFGVVLLEMLTGR 330
D++S GV+L ML+G+
Sbjct: 182 NQNGYDESCDLWSLGVILYTMLSGQ 206
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 72/161 (44%), Gaps = 21/161 (13%)
Query: 175 LAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRM 231
L E L + P LVKL ++ +V E++ G + +HL R S P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 232 KIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVST 291
+I L +LH +IYRD K N+++D + +++DFG AK V
Sbjct: 149 QIVL----TFEYLHS---LDLIYRDLKPENLIIDQQGYIQVTDFGFAK--------RVKG 193
Query: 292 R---VMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
R + GT Y APE +++ D ++ GV++ EM G
Sbjct: 194 RTWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 72/161 (44%), Gaps = 21/161 (13%)
Query: 175 LAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRM 231
L E L + P LVKL ++ +V E++ G + +HL R S P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 232 KIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVST 291
+I L +LH +IYRD K N+L+D + +++DFG AK V
Sbjct: 149 QIVL----TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKG 193
Query: 292 R---VMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
R + GT Y APE +++ D ++ GV++ +M G
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 122/297 (41%), Gaps = 52/297 (17%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHP 187
L+G+G FG VY G +G ++ + ++ N D L+ K EV H
Sbjct: 40 LIGKGRFGQVYHG--RWHGEVAIR-----LIDIERDNEDQLKAFKR---EVMAYRQTRHE 89
Query: 188 NLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEE 247
N+V +G C+ ++ +L + + + L + +IA + KG+ +LH
Sbjct: 90 NVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH-- 147
Query: 248 AEKPVIYRDFKTSNILLDGEYNAK--LSDFGL------AKDGPEGDKTHVSTRVMGTYGY 299
K ++++D K+ N+ D N K ++DFGL + G DK + G +
Sbjct: 148 -AKGILHKDLKSKNVFYD---NGKVVITDFGLFSISGVLQAGRREDKLRIQN---GWLCH 200
Query: 300 AAPEYVMTGH---------LTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARP 350
APE + + SDV++ G + E L R K +P + W
Sbjct: 201 LAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYE-LHAREWPFKTQPA---EAIIW--- 253
Query: 351 QLGERRRFYRLIDPCLEGCFSIKGAEKTIQLAASCLNRDQKARPRMSEVVEALKPLP 407
Q+G + P L I ++ + C +Q+ RP +++++ L+ LP
Sbjct: 254 QMGTG------MKPNLS---QIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLP 301
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 76/173 (43%), Gaps = 20/173 (11%)
Query: 186 HPNLVKLIGCCIED----DQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRMKIALDAA 238
HPN+++L+ C+ + + L+ F RG+L N + R + L + + L
Sbjct: 85 HPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGIC 144
Query: 239 KGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDG---PEGDKTHVSTRVMG 295
+GL +H K +RD K +NILL E L D G EG + ++ +
Sbjct: 145 RGLEAIHA---KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWA 201
Query: 296 ----TYGYAAPE-YVMTGH--LTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGE 341
T Y APE + + H + ++DV+S G VL M+ G D G+
Sbjct: 202 AQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGD 254
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 82/203 (40%), Gaps = 43/203 (21%)
Query: 168 LQGHKEWLAEVNYLGGLIHPNLVKLIGCCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLP 226
+ G +W+ ++Y +DD L LV ++ G L L + LP
Sbjct: 129 VNGDSKWITTLHY---------------AFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLP 173
Query: 227 ------WSIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKD 280
+ M IA+D+ L ++H RD K NIL+D + +L+DFG
Sbjct: 174 EEMARFYLAEMVIAIDSVHQLHYVH---------RDIKPDNILMDMNGHIRLADFGSCLK 224
Query: 281 GPEGDKTHVSTRVMGTYGYAAPEYVMT-----GHLTAKSDVYSFGVVLLEMLTGRRSMDK 335
E D T S+ +GT Y +PE + G + D +S GV + EML G
Sbjct: 225 LME-DGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGE----- 278
Query: 336 NRPNGEHNLVEWARPQLGERRRF 358
P +LVE + + RF
Sbjct: 279 -TPFYAESLVETYGKIMNHKERF 300
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 88/205 (42%), Gaps = 10/205 (4%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG+G F ++KG G T V +K L+ + + + + L H +
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHET--EVLLKVLDKAHRNYSESFFEAASMMSKLSHKH 73
Query: 189 LVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAF-LHEE 247
LV G C D+ +LV EF+ GSL+ +L + I + L+ AK LA+ +H
Sbjct: 74 LVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKN----CINILWKLEVAKQLAWAMHFL 129
Query: 248 AEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTR--VMGTYGYAAPEYV 305
E +I+ + NILL E + K + K G V + + + PE +
Sbjct: 130 EENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECI 189
Query: 306 MT-GHLTAKSDVYSFGVVLLEMLTG 329
+L +D +SFG L E+ +G
Sbjct: 190 ENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 94/217 (43%), Gaps = 29/217 (13%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLI-H 186
LLGEG + V +G +++ G AVK + EV L +
Sbjct: 20 LLGEGAYAKV-QGAVSLQ--------NGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGN 70
Query: 187 PNLVKLIGCCIEDDQRL-LVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLH 245
N+++LI EDD R LV+E + GS+ H+ ++ ++ D A L FLH
Sbjct: 71 KNILELIEF-FEDDTRFYLVFEKLQGGSILAHI-QKQKHFNEREASRVVRDVAAALDFLH 128
Query: 246 EEAEKPVIYRDFKTSNILLDGEYNA---KLSDFGLAKDGPEGDK-THVSTRVM----GTY 297
K + +RD K NIL + K+ DF L + T ++T + G+
Sbjct: 129 T---KGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSA 185
Query: 298 GYAAPEYV--MTGHLT---AKSDVYSFGVVLLEMLTG 329
Y APE V T T + D++S GVVL ML+G
Sbjct: 186 EYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSG 222
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Query: 240 GLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 299
G+ LH +I+RD K SNI++ + K+ DFGLA+ G ++ V+ Y Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRY-Y 191
Query: 300 AAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
APE ++ D++S GV++ EM+ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Query: 240 GLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 299
G+ LH +I+RD K SNI++ + K+ DFGLA+ G ++ V+ Y Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRY-Y 191
Query: 300 AAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
APE ++ D++S GV++ EM+ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 106/275 (38%), Gaps = 64/275 (23%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKE-------------- 173
LLG GGFG VY G ++ LPVA+K + D + E
Sbjct: 15 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 65
Query: 174 ------WLAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPW 227
+ + L P+ LI +E Q L + RG+L+ L R W
Sbjct: 66 KKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDF-ITERGALQEELARSFF---W 121
Query: 228 SIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLD-GEYNAKLSDFG---LAKDGPE 283
+ L+A + V++RD K NIL+D KL DFG L KD
Sbjct: 122 QV-----LEAVRHC------HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-- 168
Query: 284 GDKTHVSTRVMGTYGYAAPEYVMTGHLTAKS-DVYSFGVVLLEMLTGRRSMDKNRPNGEH 342
V T GT Y+ PE++ +S V+S G++L +M+ G + +
Sbjct: 169 -----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE----- 218
Query: 343 NLVEWARPQLGERRRFYRLIDPCLEGCFSIKGAEK 377
E R Q+ R+R + C +++ +++
Sbjct: 219 ---EIIRGQVFFRQRVSSECQHLIRWCLALRPSDR 250
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 71/161 (44%), Gaps = 21/161 (13%)
Query: 175 LAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRM 231
L E L + P LVKL ++ +V E++ G + +HL R S P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 232 KIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVST 291
+I L +LH +IYRD K N+L+D + +++DFG AK V
Sbjct: 149 QIVL----TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKG 193
Query: 292 R---VMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
R + GT Y AP +++ D ++ GV++ EM G
Sbjct: 194 RTWXLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 87/210 (41%), Gaps = 28/210 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQG--HKEWLAEVNYLGGLIH 186
LG+G F V + VK A K +N L H++ E L H
Sbjct: 39 LGKGAFSVVRR---------CVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKH 89
Query: 187 PNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHE 246
PN+V+L E+ LV++ + G L + R DA+ + + E
Sbjct: 90 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVARE--------YYSEADASHCIHQILE 141
Query: 247 EA----EKPVIYRDFKTSNILLDGEYN---AKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 299
+ +++RD K N+LL + KL+DFGLA + +G++ GT GY
Sbjct: 142 SVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIE-VQGEQ-QAWFGFAGTPGY 199
Query: 300 AAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
+PE + D+++ GV+L +L G
Sbjct: 200 LSPEVLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 87/210 (41%), Gaps = 28/210 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQG--HKEWLAEVNYLGGLIH 186
LG+G F V + VK G A +N L H++ E L H
Sbjct: 19 LGKGAFSVVRR---------CVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKH 69
Query: 187 PNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHE 246
PN+V+L E+ L+++ + G L + R DA+ + + E
Sbjct: 70 PNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVARE--------YYSEADASHCIQQILE 121
Query: 247 EA----EKPVIYRDFKTSNILLDGEYN---AKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 299
+ V++R+ K N+LL + KL+DFGLA + EG++ GT GY
Sbjct: 122 AVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIE-VEGEQ-QAWFGFAGTPGY 179
Query: 300 AAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
+PE + D+++ GV+L +L G
Sbjct: 180 LSPEVLRKDPYGKPVDLWACGVILYILLVG 209
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 240 GLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 299
G+ LH +I+RD K SNI++ + K+ DFGLA+ G ++ V+ Y Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPEVVTRY-Y 191
Query: 300 AAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
APE ++ D++S G ++ EM+ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 108/274 (39%), Gaps = 62/274 (22%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWL------AEVNYL 181
LLG GGFG VY G ++ LPVA+K + D + E EV L
Sbjct: 30 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 80
Query: 182 GGLI--HPNLVKLIGCCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 228
+ +++L+ D +L+ E RG+L+ L R W
Sbjct: 81 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 137
Query: 229 IRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLD-GEYNAKLSDFG---LAKDGPEG 284
+ L+A + V++RD K NIL+D KL DFG L KD
Sbjct: 138 V-----LEAVRHCH------NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--- 183
Query: 285 DKTHVSTRVMGTYGYAAPEYVMTGHLTAKS-DVYSFGVVLLEMLTGRRSMDKNRPNGEHN 343
V T GT Y+ PE++ +S V+S G++L +M+ G + +
Sbjct: 184 ----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------ 233
Query: 344 LVEWARPQLGERRRFYRLIDPCLEGCFSIKGAEK 377
E R Q+ R+R + C +++ +++
Sbjct: 234 --EIIRGQVFFRQRVSSECQHLIRWCLALRPSDR 265
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 108/274 (39%), Gaps = 62/274 (22%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWL------AEVNYL 181
LLG GGFG VY G ++ LPVA+K + D + E EV L
Sbjct: 43 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 93
Query: 182 GGLI--HPNLVKLIGCCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 228
+ +++L+ D +L+ E RG+L+ L R W
Sbjct: 94 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 150
Query: 229 IRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLD-GEYNAKLSDFG---LAKDGPEG 284
+ L+A + V++RD K NIL+D KL DFG L KD
Sbjct: 151 V-----LEAVRHCH------NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--- 196
Query: 285 DKTHVSTRVMGTYGYAAPEYVMTGHLTAKS-DVYSFGVVLLEMLTGRRSMDKNRPNGEHN 343
V T GT Y+ PE++ +S V+S G++L +M+ G + +
Sbjct: 197 ----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------ 246
Query: 344 LVEWARPQLGERRRFYRLIDPCLEGCFSIKGAEK 377
E R Q+ R+R + C +++ +++
Sbjct: 247 --EIIRGQVFFRQRVSSECQHLIRWCLALRPSDR 278
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 108/274 (39%), Gaps = 62/274 (22%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWL------AEVNYL 181
LLG GGFG VY G ++ LPVA+K + D + E EV L
Sbjct: 30 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 80
Query: 182 GGLI--HPNLVKLIGCCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 228
+ +++L+ D +L+ E RG+L+ L R W
Sbjct: 81 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 137
Query: 229 IRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLD-GEYNAKLSDFG---LAKDGPEG 284
+ L+A + V++RD K NIL+D KL DFG L KD
Sbjct: 138 V-----LEAVRHCH------NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--- 183
Query: 285 DKTHVSTRVMGTYGYAAPEYVMTGHLTAKS-DVYSFGVVLLEMLTGRRSMDKNRPNGEHN 343
V T GT Y+ PE++ +S V+S G++L +M+ G + +
Sbjct: 184 ----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------ 233
Query: 344 LVEWARPQLGERRRFYRLIDPCLEGCFSIKGAEK 377
E R Q+ R+R + C +++ +++
Sbjct: 234 --EIIRGQVFFRQRVSXECQHLIRWCLALRPSDR 265
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 108/274 (39%), Gaps = 62/274 (22%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWL------AEVNYL 181
LLG GGFG VY G ++ LPVA+K + D + E EV L
Sbjct: 11 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 182 GGLI--HPNLVKLIGCCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 228
+ +++L+ D +L+ E RG+L+ L R W
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 118
Query: 229 IRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLD-GEYNAKLSDFG---LAKDGPEG 284
+ L+A + V++RD K NIL+D KL DFG L KD
Sbjct: 119 V-----LEAVRHCH------NXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--- 164
Query: 285 DKTHVSTRVMGTYGYAAPEYVMTGHLTAKS-DVYSFGVVLLEMLTGRRSMDKNRPNGEHN 343
V T GT Y+ PE++ +S V+S G++L +M+ G + +
Sbjct: 165 ----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------ 214
Query: 344 LVEWARPQLGERRRFYRLIDPCLEGCFSIKGAEK 377
E R Q+ R+R + C +++ +++
Sbjct: 215 --EIIRGQVFFRQRVSXECQHLIRWCLALRPSDR 246
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 108/274 (39%), Gaps = 62/274 (22%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWL------AEVNYL 181
LLG GGFG VY G ++ LPVA+K + D + E EV L
Sbjct: 31 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 81
Query: 182 GGLI--HPNLVKLIGCCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 228
+ +++L+ D +L+ E RG+L+ L R W
Sbjct: 82 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 138
Query: 229 IRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLD-GEYNAKLSDFG---LAKDGPEG 284
+ L+A + V++RD K NIL+D KL DFG L KD
Sbjct: 139 V-----LEAVRHCH------NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--- 184
Query: 285 DKTHVSTRVMGTYGYAAPEYVMTGHLTAKS-DVYSFGVVLLEMLTGRRSMDKNRPNGEHN 343
V T GT Y+ PE++ +S V+S G++L +M+ G + +
Sbjct: 185 ----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------ 234
Query: 344 LVEWARPQLGERRRFYRLIDPCLEGCFSIKGAEK 377
E R Q+ R+R + C +++ +++
Sbjct: 235 --EIIRGQVFFRQRVSSECQHLIRWCLALRPSDR 266
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 108/274 (39%), Gaps = 62/274 (22%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWL------AEVNYL 181
LLG GGFG VY G ++ LPVA+K + D + E EV L
Sbjct: 16 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 66
Query: 182 GGLI--HPNLVKLIGCCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 228
+ +++L+ D +L+ E RG+L+ L R W
Sbjct: 67 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 123
Query: 229 IRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLD-GEYNAKLSDFG---LAKDGPEG 284
+ L+A + V++RD K NIL+D KL DFG L KD
Sbjct: 124 V-----LEAVRHCH------NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--- 169
Query: 285 DKTHVSTRVMGTYGYAAPEYVMTGHLTAKS-DVYSFGVVLLEMLTGRRSMDKNRPNGEHN 343
V T GT Y+ PE++ +S V+S G++L +M+ G + +
Sbjct: 170 ----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------ 219
Query: 344 LVEWARPQLGERRRFYRLIDPCLEGCFSIKGAEK 377
E R Q+ R+R + C +++ +++
Sbjct: 220 --EIIRGQVFFRQRVSSECQHLIRWCLALRPSDR 251
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 108/274 (39%), Gaps = 62/274 (22%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWL------AEVNYL 181
LLG GGFG VY G ++ LPVA+K + D + E EV L
Sbjct: 31 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 81
Query: 182 GGLI--HPNLVKLIGCCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 228
+ +++L+ D +L+ E RG+L+ L R W
Sbjct: 82 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 138
Query: 229 IRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLD-GEYNAKLSDFG---LAKDGPEG 284
+ L+A + V++RD K NIL+D KL DFG L KD
Sbjct: 139 V-----LEAVRHCH------NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--- 184
Query: 285 DKTHVSTRVMGTYGYAAPEYVMTGHLTAKS-DVYSFGVVLLEMLTGRRSMDKNRPNGEHN 343
V T GT Y+ PE++ +S V+S G++L +M+ G + +
Sbjct: 185 ----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------ 234
Query: 344 LVEWARPQLGERRRFYRLIDPCLEGCFSIKGAEK 377
E R Q+ R+R + C +++ +++
Sbjct: 235 --EIIRGQVFFRQRVSXECQHLIRWCLALRPSDR 266
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 109/274 (39%), Gaps = 62/274 (22%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWL------AEVNYL 181
LLG GGFG VY G ++ LPVA+K + D + E EV L
Sbjct: 50 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 100
Query: 182 GGLI--HPNLVKLIGCCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 228
+ +++L+ D +L+ E RG+L+ L R W
Sbjct: 101 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 157
Query: 229 IRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLD-GEYNAKLSDFG---LAKDGPEG 284
+ L+A + H V++RD K NIL+D KL DFG L KD
Sbjct: 158 V-----LEAVR---HCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--- 203
Query: 285 DKTHVSTRVMGTYGYAAPEYVMTGHLTAKS-DVYSFGVVLLEMLTGRRSMDKNRPNGEHN 343
V T GT Y+ PE++ +S V+S G++L +M+ G + +
Sbjct: 204 ----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------ 253
Query: 344 LVEWARPQLGERRRFYRLIDPCLEGCFSIKGAEK 377
E R Q+ R+R + C +++ +++
Sbjct: 254 --EIIRGQVFFRQRVSSECQHLIRWCLALRPSDR 285
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 108/274 (39%), Gaps = 62/274 (22%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWL------AEVNYL 181
LLG GGFG VY G ++ LPVA+K + D + E EV L
Sbjct: 16 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 66
Query: 182 GGLI--HPNLVKLIGCCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 228
+ +++L+ D +L+ E RG+L+ L R W
Sbjct: 67 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 123
Query: 229 IRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLD-GEYNAKLSDFG---LAKDGPEG 284
+ L+A + V++RD K NIL+D KL DFG L KD
Sbjct: 124 V-----LEAVRHCH------NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--- 169
Query: 285 DKTHVSTRVMGTYGYAAPEYVMTGHLTAKS-DVYSFGVVLLEMLTGRRSMDKNRPNGEHN 343
V T GT Y+ PE++ +S V+S G++L +M+ G + +
Sbjct: 170 ----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------ 219
Query: 344 LVEWARPQLGERRRFYRLIDPCLEGCFSIKGAEK 377
E R Q+ R+R + C +++ +++
Sbjct: 220 --EIIRGQVFFRQRVSSECQHLIRWCLALRPSDR 251
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 108/274 (39%), Gaps = 62/274 (22%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWL------AEVNYL 181
LLG GGFG VY G ++ LPVA+K + D + E EV L
Sbjct: 15 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 65
Query: 182 GGLI--HPNLVKLIGCCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 228
+ +++L+ D +L+ E RG+L+ L R W
Sbjct: 66 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 122
Query: 229 IRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLD-GEYNAKLSDFG---LAKDGPEG 284
+ L+A + V++RD K NIL+D KL DFG L KD
Sbjct: 123 V-----LEAVRHCH------NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--- 168
Query: 285 DKTHVSTRVMGTYGYAAPEYVMTGHLTAKS-DVYSFGVVLLEMLTGRRSMDKNRPNGEHN 343
V T GT Y+ PE++ +S V+S G++L +M+ G + +
Sbjct: 169 ----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------ 218
Query: 344 LVEWARPQLGERRRFYRLIDPCLEGCFSIKGAEK 377
E R Q+ R+R + C +++ +++
Sbjct: 219 --EIIRGQVFFRQRVSSECQHLIRWCLALRPSDR 250
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 108/274 (39%), Gaps = 62/274 (22%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWL------AEVNYL 181
LLG GGFG VY G ++ LPVA+K + D + E EV L
Sbjct: 58 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 108
Query: 182 GGLI--HPNLVKLIGCCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 228
+ +++L+ D +L+ E RG+L+ L R W
Sbjct: 109 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 165
Query: 229 IRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLD-GEYNAKLSDFG---LAKDGPEG 284
+ L+A + V++RD K NIL+D KL DFG L KD
Sbjct: 166 V-----LEAVRHCH------NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--- 211
Query: 285 DKTHVSTRVMGTYGYAAPEYVMTGHLTAKS-DVYSFGVVLLEMLTGRRSMDKNRPNGEHN 343
V T GT Y+ PE++ +S V+S G++L +M+ G + +
Sbjct: 212 ----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------ 261
Query: 344 LVEWARPQLGERRRFYRLIDPCLEGCFSIKGAEK 377
E R Q+ R+R + C +++ +++
Sbjct: 262 --EIIRGQVFFRQRVSSECQHLIRWCLALRPSDR 293
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 108/274 (39%), Gaps = 62/274 (22%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWL------AEVNYL 181
LLG GGFG VY G ++ LPVA+K + D + E EV L
Sbjct: 58 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 108
Query: 182 GGLI--HPNLVKLIGCCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 228
+ +++L+ D +L+ E RG+L+ L R W
Sbjct: 109 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 165
Query: 229 IRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLD-GEYNAKLSDFG---LAKDGPEG 284
+ L+A + V++RD K NIL+D KL DFG L KD
Sbjct: 166 V-----LEAVRHCH------NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--- 211
Query: 285 DKTHVSTRVMGTYGYAAPEYVMTGHLTAKS-DVYSFGVVLLEMLTGRRSMDKNRPNGEHN 343
V T GT Y+ PE++ +S V+S G++L +M+ G + +
Sbjct: 212 ----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------ 261
Query: 344 LVEWARPQLGERRRFYRLIDPCLEGCFSIKGAEK 377
E R Q+ R+R + C +++ +++
Sbjct: 262 --EIIRGQVFFRQRVSXECQHLIRWCLALRPSDR 293
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 68/145 (46%), Gaps = 21/145 (14%)
Query: 200 DQRLLVYEFMPRGSLENHLFRRSL--PLPWSIRMKIALDAAKGLAFLHEEAEKPVIYRDF 257
D+ LV+E M GS+ +H+ +R L S+ + D A L FLH K + +RD
Sbjct: 84 DRFYLVFEKMRGGSILSHIHKRRHFNELEASV---VVQDVASALDFLH---NKGIAHRDL 137
Query: 258 KTSNILLDGEYN---AKLSDFGLAKD-GPEGDKTHVSTRVM----GTYGYAAPEYVMTGH 309
K NIL + K+ DF L GD + +ST + G+ Y APE V
Sbjct: 138 KPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFS 197
Query: 310 LTA-----KSDVYSFGVVLLEMLTG 329
A + D++S GV+L +L+G
Sbjct: 198 EEASIYDKRCDLWSLGVILYILLSG 222
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 71/161 (44%), Gaps = 21/161 (13%)
Query: 175 LAEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFR---RSLPLPWSIRM 231
L E L + P LVKL ++ +V E++ G + +HL R S P
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 232 KIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVST 291
+I L +LH +IYRD K N+L+D + +++DFG AK V
Sbjct: 149 QIVL----TFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK--------RVKG 193
Query: 292 R---VMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
R + GT APE +++ D ++ GV++ EM G
Sbjct: 194 RTWXLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 106/247 (42%), Gaps = 34/247 (13%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPN 188
LG GG G V+ + V VA+K + Q K L E+ + L H N
Sbjct: 19 LGCGGNGLVF---------SAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDN 69
Query: 189 LVKL--------------IGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIA 234
+VK+ +G E + +V E+M L N L + L L R+
Sbjct: 70 IVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYM-ETDLANVLEQGPL-LEEHARL-FM 126
Query: 235 LDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGE-YNAKLSDFGLAK--DGPEGDKTHVST 291
+GL ++H V++RD K +N+ ++ E K+ DFGLA+ D K H+S
Sbjct: 127 YQLLRGLKYIHSAN---VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSE 183
Query: 292 RVMGTYGYAAPEYVMT-GHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARP 350
++ T Y +P +++ + T D+++ G + EMLTG+ + L+ + P
Sbjct: 184 GLV-TKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIP 242
Query: 351 QLGERRR 357
+ E R
Sbjct: 243 VVHEEDR 249
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 108/274 (39%), Gaps = 62/274 (22%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWL------AEVNYL 181
LLG GGFG VY G ++ LPVA+K + D + E EV L
Sbjct: 63 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 113
Query: 182 GGLI--HPNLVKLIGCCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 228
+ +++L+ D +L+ E RG+L+ L R W
Sbjct: 114 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 170
Query: 229 IRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLD-GEYNAKLSDFG---LAKDGPEG 284
+ L+A + V++RD K NIL+D KL DFG L KD
Sbjct: 171 V-----LEAVRHCH------NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--- 216
Query: 285 DKTHVSTRVMGTYGYAAPEYVMTGHLTAKS-DVYSFGVVLLEMLTGRRSMDKNRPNGEHN 343
V T GT Y+ PE++ +S V+S G++L +M+ G + +
Sbjct: 217 ----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------ 266
Query: 344 LVEWARPQLGERRRFYRLIDPCLEGCFSIKGAEK 377
E R Q+ R+R + C +++ +++
Sbjct: 267 --EIIRGQVFFRQRVSXECQHLIRWCLALRPSDR 298
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 108/274 (39%), Gaps = 62/274 (22%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWL------AEVNYL 181
LLG GGFG VY G ++ LPVA+K + D + E EV L
Sbjct: 16 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 66
Query: 182 GGLI--HPNLVKLIGCCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 228
+ +++L+ D +L+ E RG+L+ L R W
Sbjct: 67 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 123
Query: 229 IRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLD-GEYNAKLSDFG---LAKDGPEG 284
+ L+A + V++RD K NIL+D KL DFG L KD
Sbjct: 124 V-----LEAVRHCH------NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--- 169
Query: 285 DKTHVSTRVMGTYGYAAPEYVMTGHLTAKS-DVYSFGVVLLEMLTGRRSMDKNRPNGEHN 343
V T GT Y+ PE++ +S V+S G++L +M+ G + +
Sbjct: 170 ----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------ 219
Query: 344 LVEWARPQLGERRRFYRLIDPCLEGCFSIKGAEK 377
E R Q+ R+R + C +++ +++
Sbjct: 220 --EIIRGQVFFRQRVSSECQHLIRWCLALRPSDR 251
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 76/169 (44%), Gaps = 20/169 (11%)
Query: 177 EVNYLGGLIHPNLVKLIGCCIE--DDQRLLVYEFMPRGSLENHLFRRS-------LPLPW 227
E+ L L HPN++ L + D + L++++ F R+ + LP
Sbjct: 68 EIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPR 127
Query: 228 SIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGE----YNAKLSDFGLAK--DG 281
+ + G+ +LH V++RD K +NIL+ GE K++D G A+ +
Sbjct: 128 GMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNS 184
Query: 282 PEGDKTHVSTRVMGTYGYAAPEYVMTG-HLTAKSDVYSFGVVLLEMLTG 329
P + V+ T+ Y APE ++ H T D+++ G + E+LT
Sbjct: 185 PLKPLADLDP-VVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTS 232
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 240 GLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 299
G+ LH +I+RD K SNI++ + K+ DFGLA+ G ++ V+ Y Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-Y 191
Query: 300 AAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
APE ++ D++S G ++ EM+ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 240 GLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 299
G+ LH +I+RD K SNI++ + K+ DFGLA+ G ++ V+ Y Y
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-Y 192
Query: 300 AAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
APE ++ D++S G ++ EM+ G
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 88/207 (42%), Gaps = 20/207 (9%)
Query: 126 ECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLI 185
E +G G +G V V+ GT + A K + ++ + E+ + L
Sbjct: 31 ENTIGRGSWGEV---------KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLD 81
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLH 245
HPN+++L ++ LV E G L + + + S +I D +A+ H
Sbjct: 82 HPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRV-FRESDAARIMKDVLSAVAYCH 140
Query: 246 EEAEKPVIYRDFKTSNILL---DGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAP 302
+ V +RD K N L + KL DFGLA G + T+V GT Y +P
Sbjct: 141 KLN---VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG--KMMRTKV-GTPYYVSP 194
Query: 303 EYVMTGHLTAKSDVYSFGVVLLEMLTG 329
+ V+ G + D +S GV++ +L G
Sbjct: 195 Q-VLEGLYGPECDEWSAGVMMYVLLCG 220
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 88/207 (42%), Gaps = 20/207 (9%)
Query: 126 ECLLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLI 185
E +G G +G V V+ GT + A K + ++ + E+ + L
Sbjct: 14 ENTIGRGSWGEV---------KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLD 64
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLH 245
HPN+++L ++ LV E G L + + + S +I D +A+ H
Sbjct: 65 HPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRV-FRESDAARIMKDVLSAVAYCH 123
Query: 246 EEAEKPVIYRDFKTSNILL---DGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAP 302
+ V +RD K N L + KL DFGLA G + T+V GT Y +P
Sbjct: 124 KLN---VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG--KMMRTKV-GTPYYVSP 177
Query: 303 EYVMTGHLTAKSDVYSFGVVLLEMLTG 329
+ V+ G + D +S GV++ +L G
Sbjct: 178 Q-VLEGLYGPECDEWSAGVMMYVLLCG 203
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 240 GLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 299
G+ LH +I+RD K SNI++ + K+ DFGLA+ G ++ V+ Y Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-Y 191
Query: 300 AAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
APE ++ D++S G ++ EM+ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 108/274 (39%), Gaps = 62/274 (22%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWL------AEVNYL 181
LLG GGFG VY G ++ LPVA+K + D + E EV L
Sbjct: 38 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 88
Query: 182 GGLI--HPNLVKLIGCCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 228
+ +++L+ D +L+ E RG+L+ L R W
Sbjct: 89 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 145
Query: 229 IRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLD-GEYNAKLSDFG---LAKDGPEG 284
+ L+A + V++RD K NIL+D KL DFG L KD
Sbjct: 146 V-----LEAVRHCH------NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--- 191
Query: 285 DKTHVSTRVMGTYGYAAPEYVMTGHLTAKS-DVYSFGVVLLEMLTGRRSMDKNRPNGEHN 343
V T GT Y+ PE++ +S V+S G++L +M+ G + +
Sbjct: 192 ----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------ 241
Query: 344 LVEWARPQLGERRRFYRLIDPCLEGCFSIKGAEK 377
E R Q+ R+R + C +++ +++
Sbjct: 242 --EIIRGQVFFRQRVSXECQHLIRWCLALRPSDR 273
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 97/216 (44%), Gaps = 36/216 (16%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHP 187
++G G FG V++ + + VA+K + LQ + E+ + + HP
Sbjct: 47 VIGNGSFGVVFQAKLVESDE----------VAIKKV----LQDKRFKNRELQIMRIVKHP 92
Query: 188 NLVKLIGCCIEDDQRL------LVYEFMP----RGSLENHLFRRSLPLPWSIRMKIAL-D 236
N+V L + + LV E++P R S ++++P+ + +K+ +
Sbjct: 93 NVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPM---LLIKLYMYQ 149
Query: 237 AAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNA-KLSDFGLAKDGPEGDKTHVSTRVMG 295
+ LA++H + +RD K N+LLD KL DFG AK G+ + +
Sbjct: 150 LLRSLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEP---NVSXIC 203
Query: 296 TYGYAAPEYVM-TGHLTAKSDVYSFGVVLLEMLTGR 330
+ Y APE + + T D++S G V+ E++ G+
Sbjct: 204 SRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 240 GLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 299
G+ LH +I+RD K SNI++ + K+ DFGLA+ G ++ V+ Y Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRY-Y 191
Query: 300 AAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
APE ++ D++S G ++ EM+ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 240 GLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 299
G+ LH +I+RD K SNI++ + K+ DFGLA+ G ++ V+ Y Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-Y 191
Query: 300 AAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
APE ++ D++S G ++ EM+ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 94/213 (44%), Gaps = 30/213 (14%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHK------EWLAEVNYLG 182
LG G F V K + TGL A K + + + E EV+ L
Sbjct: 20 LGSGQFAIVKKCR---------EKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILR 70
Query: 183 GLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIR-MKIALDAAKG 240
++H N++ L +L+ E + G L + L ++ SL + +K LD G
Sbjct: 71 QVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD---G 127
Query: 241 LAFLHEEAEKPVIYRDFKTSNI-LLDGEY---NAKLSDFGLAKDGPEGDKTHVSTRVMGT 296
+ +LH K + + D K NI LLD + KL DFGLA + +G + + GT
Sbjct: 128 VNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KNIFGT 181
Query: 297 YGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
+ APE V L ++D++S GV+ +L+G
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 91/226 (40%), Gaps = 54/226 (23%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWL------AEVNYL 181
LLG GGFG VY G ++ LPVA+K + D + E EV L
Sbjct: 44 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 94
Query: 182 GGLI--HPNLVKLIGCCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 228
+ +++L+ D +L+ E RG+L+ L R W
Sbjct: 95 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 151
Query: 229 IRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLD-GEYNAKLSDFG---LAKDGPEG 284
+ L+A + V++RD K NIL+D KL DFG L KD
Sbjct: 152 V-----LEAVRHCH------NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--- 197
Query: 285 DKTHVSTRVMGTYGYAAPEYVMTGHLTAKS-DVYSFGVVLLEMLTG 329
V T GT Y+ PE++ +S V+S G++L +M+ G
Sbjct: 198 ----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 240 GLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 299
G+ LH +I+RD K SNI++ + K+ DFGLA+ G ++ V+ Y Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRY-Y 191
Query: 300 AAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
APE ++ D++S G ++ EM+ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 108/274 (39%), Gaps = 62/274 (22%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWL------AEVNYL 181
LLG GGFG VY G ++ LPVA+K + D + E EV L
Sbjct: 11 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 182 GGLI--HPNLVKLIGCCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 228
+ +++L+ D +L+ E RG+L+ L R W
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 118
Query: 229 IRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLD-GEYNAKLSDFG---LAKDGPEG 284
+ L+A + V++RD K NIL+D KL DFG L KD
Sbjct: 119 V-----LEAVRHCH------NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--- 164
Query: 285 DKTHVSTRVMGTYGYAAPEYVMTGHLTAKS-DVYSFGVVLLEMLTGRRSMDKNRPNGEHN 343
V T GT Y+ PE++ +S V+S G++L +M+ G + +
Sbjct: 165 ----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------ 214
Query: 344 LVEWARPQLGERRRFYRLIDPCLEGCFSIKGAEK 377
E R Q+ R+R + C +++ +++
Sbjct: 215 --EIIRGQVFFRQRVSSECQHLIRWCLALRPSDR 246
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 94/213 (44%), Gaps = 30/213 (14%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHK------EWLAEVNYLG 182
LG G F V K + TGL A K + + + E EV+ L
Sbjct: 20 LGSGQFAIVKKCR---------EKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILR 70
Query: 183 GLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIR-MKIALDAAKG 240
++H N++ L +L+ E + G L + L ++ SL + +K LD G
Sbjct: 71 QVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD---G 127
Query: 241 LAFLHEEAEKPVIYRDFKTSNI-LLDGEY---NAKLSDFGLAKDGPEGDKTHVSTRVMGT 296
+ +LH K + + D K NI LLD + KL DFGLA + +G + + GT
Sbjct: 128 VNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KNIFGT 181
Query: 297 YGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
+ APE V L ++D++S GV+ +L+G
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 108/274 (39%), Gaps = 62/274 (22%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWL------AEVNYL 181
LLG GGFG VY G ++ LPVA+K + D + E EV L
Sbjct: 14 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 64
Query: 182 GGLI--HPNLVKLIGCCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 228
+ +++L+ D +L+ E RG+L+ L R W
Sbjct: 65 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 121
Query: 229 IRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLD-GEYNAKLSDFG---LAKDGPEG 284
+ L+A + V++RD K NIL+D KL DFG L KD
Sbjct: 122 V-----LEAVRHCH------NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--- 167
Query: 285 DKTHVSTRVMGTYGYAAPEYVMTGHLTAKS-DVYSFGVVLLEMLTGRRSMDKNRPNGEHN 343
V T GT Y+ PE++ +S V+S G++L +M+ G + +
Sbjct: 168 ----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------ 217
Query: 344 LVEWARPQLGERRRFYRLIDPCLEGCFSIKGAEK 377
E R Q+ R+R + C +++ +++
Sbjct: 218 --EIIRGQVFFRQRVSSECQHLIRWCLALRPSDR 249
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 107/274 (39%), Gaps = 62/274 (22%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWL------AEVNYL 181
LLG GGFG VY G ++ LPVA+K + D + E EV L
Sbjct: 31 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 81
Query: 182 GGLI--HPNLVKLIGCCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 228
+ +++L+ D +L+ E RG+L+ L R W
Sbjct: 82 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 138
Query: 229 IRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLD-GEYNAKLSDFG---LAKDGPEG 284
+ L+A + V++RD K NIL+D KL DFG L KD
Sbjct: 139 V-----LEAVRHCH------NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--- 184
Query: 285 DKTHVSTRVMGTYGYAAPEYVMTGHLTAKS-DVYSFGVVLLEMLTGRRSMDKNRPNGEHN 343
V T GT Y+ PE++ +S V+S G++L +M+ G + +
Sbjct: 185 ----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------ 234
Query: 344 LVEWARPQLGERRRFYRLIDPCLEGCFSIKGAEK 377
E R Q+ R+R + C +++ ++
Sbjct: 235 --EIIRGQVFFRQRVSXECQHLIRWCLALRPXDR 266
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 91/226 (40%), Gaps = 54/226 (23%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWL------AEVNYL 181
LLG GGFG VY G ++ LPVA+K + D + E EV L
Sbjct: 44 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 94
Query: 182 GGLI--HPNLVKLIGCCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 228
+ +++L+ D +L+ E RG+L+ L R W
Sbjct: 95 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 151
Query: 229 IRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLD-GEYNAKLSDFG---LAKDGPEG 284
+ L+A + V++RD K NIL+D KL DFG L KD
Sbjct: 152 V-----LEAVRHCH------NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--- 197
Query: 285 DKTHVSTRVMGTYGYAAPEYVMTGHLTAKS-DVYSFGVVLLEMLTG 329
V T GT Y+ PE++ +S V+S G++L +M+ G
Sbjct: 198 ----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 91/226 (40%), Gaps = 54/226 (23%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWL------AEVNYL 181
LLG GGFG VY G ++ LPVA+K + D + E EV L
Sbjct: 43 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 93
Query: 182 GGLI--HPNLVKLIGCCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 228
+ +++L+ D +L+ E RG+L+ L R W
Sbjct: 94 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 150
Query: 229 IRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLD-GEYNAKLSDFG---LAKDGPEG 284
+ L+A + V++RD K NIL+D KL DFG L KD
Sbjct: 151 V-----LEAVRHCH------NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--- 196
Query: 285 DKTHVSTRVMGTYGYAAPEYVMTGHLTAKS-DVYSFGVVLLEMLTG 329
V T GT Y+ PE++ +S V+S G++L +M+ G
Sbjct: 197 ----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 240 GLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 299
G+ LH +I+RD K SNI++ + K+ DFGLA+ G ++ V+ Y Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTA--GTSFMMTPYVVTRY-Y 191
Query: 300 AAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
APE ++ D++S G ++ EM+ G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 91/226 (40%), Gaps = 54/226 (23%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWL------AEVNYL 181
LLG GGFG VY G ++ LPVA+K + D + E EV L
Sbjct: 43 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 93
Query: 182 GGLI--HPNLVKLIGCCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 228
+ +++L+ D +L+ E RG+L+ L R W
Sbjct: 94 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 150
Query: 229 IRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLD-GEYNAKLSDFG---LAKDGPEG 284
+ L+A + V++RD K NIL+D KL DFG L KD
Sbjct: 151 V-----LEAVRHCH------NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--- 196
Query: 285 DKTHVSTRVMGTYGYAAPEYVMTGHLTAKS-DVYSFGVVLLEMLTG 329
V T GT Y+ PE++ +S V+S G++L +M+ G
Sbjct: 197 ----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 91/226 (40%), Gaps = 54/226 (23%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWL------AEVNYL 181
LLG GGFG VY G ++ LPVA+K + D + E EV L
Sbjct: 44 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 94
Query: 182 GGLI--HPNLVKLIGCCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 228
+ +++L+ D +L+ E RG+L+ L R W
Sbjct: 95 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 151
Query: 229 IRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLD-GEYNAKLSDFG---LAKDGPEG 284
+ L+A + V++RD K NIL+D KL DFG L KD
Sbjct: 152 V-----LEAVRHCH------NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--- 197
Query: 285 DKTHVSTRVMGTYGYAAPEYVMTGHLTAKS-DVYSFGVVLLEMLTG 329
V T GT Y+ PE++ +S V+S G++L +M+ G
Sbjct: 198 ----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 91/226 (40%), Gaps = 54/226 (23%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWL------AEVNYL 181
LLG GGFG VY G ++ LPVA+K + D + E EV L
Sbjct: 43 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 93
Query: 182 GGLI--HPNLVKLIGCCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 228
+ +++L+ D +L+ E RG+L+ L R W
Sbjct: 94 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 150
Query: 229 IRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLD-GEYNAKLSDFG---LAKDGPEG 284
+ L+A + V++RD K NIL+D KL DFG L KD
Sbjct: 151 V-----LEAVRHCH------NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--- 196
Query: 285 DKTHVSTRVMGTYGYAAPEYVMTGHLTAKS-DVYSFGVVLLEMLTG 329
V T GT Y+ PE++ +S V+S G++L +M+ G
Sbjct: 197 ----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 91/226 (40%), Gaps = 54/226 (23%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWL------AEVNYL 181
LLG GGFG VY G ++ LPVA+K + D + E EV L
Sbjct: 44 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 94
Query: 182 GGLI--HPNLVKLIGCCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 228
+ +++L+ D +L+ E RG+L+ L R W
Sbjct: 95 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 151
Query: 229 IRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLD-GEYNAKLSDFG---LAKDGPEG 284
+ L+A + V++RD K NIL+D KL DFG L KD
Sbjct: 152 V-----LEAVRHCH------NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--- 197
Query: 285 DKTHVSTRVMGTYGYAAPEYVMTGHLTAKS-DVYSFGVVLLEMLTG 329
V T GT Y+ PE++ +S V+S G++L +M+ G
Sbjct: 198 ----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 99/253 (39%), Gaps = 53/253 (20%)
Query: 176 AEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLE-----NHLFRRSLPLPWSIR 230
E+ L L HP ++K I + + +V E M G L N + + + +
Sbjct: 70 TEIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 128
Query: 231 MKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYN---AKLSDFGLAKDGPEGDKT 287
M +A+ +LHE +I+RD K N+LL + K++DFG +K E T
Sbjct: 129 MLLAVQ------YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE---T 176
Query: 288 HVSTRVMGTYGYAAPEYVM---TGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNL 344
+ + GT Y APE ++ T D +S GV+L L+G
Sbjct: 177 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG--------------- 221
Query: 345 VEWARPQLGERRRFYRLIDPCLEGCFSI------KGAEKTIQLAASCLNRDQKARPRMSE 398
P E R L D G ++ + +EK + L L D KAR E
Sbjct: 222 ----YPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEE 277
Query: 399 VVEALKPLPYLKD 411
+ P+L+D
Sbjct: 278 ALRH----PWLQD 286
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 88/211 (41%), Gaps = 26/211 (12%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHK------EWLAEVNYLG 182
LG G F V K + TGL A K + + + E EV+ L
Sbjct: 20 LGSGQFAIVKK---------CREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILR 70
Query: 183 GLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLA 242
++H N++ L +L+ E + G L + L ++ L G+
Sbjct: 71 QVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVN 129
Query: 243 FLHEEAEKPVIYRDFKTSNI-LLDGEY---NAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 298
+LH K + + D K NI LLD + KL DFGLA + +G + + GT
Sbjct: 130 YLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KNIFGTPE 183
Query: 299 YAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
+ APE V L ++D++S GV+ +L+G
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 88/211 (41%), Gaps = 26/211 (12%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHK------EWLAEVNYLG 182
LG G F V K + TGL A K + + + E EV+ L
Sbjct: 20 LGSGQFAIVKK---------CREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILR 70
Query: 183 GLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLA 242
++H N++ L +L+ E + G L + L ++ L G+
Sbjct: 71 QVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVN 129
Query: 243 FLHEEAEKPVIYRDFKTSNI-LLDGEY---NAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 298
+LH K + + D K NI LLD + KL DFGLA + +G + + GT
Sbjct: 130 YLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KNIFGTPE 183
Query: 299 YAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
+ APE V L ++D++S GV+ +L+G
Sbjct: 184 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 102/267 (38%), Gaps = 53/267 (19%)
Query: 176 AEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLE-----NHLFRRSLPLPWSIR 230
E+ L L HP ++K I + + +V E M G L N + + + +
Sbjct: 189 TEIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 247
Query: 231 MKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYN---AKLSDFGLAKDGPEGDKT 287
M +A+ +LHE +I+RD K N+LL + K++DFG +K E T
Sbjct: 248 MLLAVQ------YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE---T 295
Query: 288 HVSTRVMGTYGYAAPEYVM---TGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNL 344
+ + GT Y APE ++ T D +S GV+L L+G
Sbjct: 296 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG--------------- 340
Query: 345 VEWARPQLGERRRFYRLIDPCLEGCFSI------KGAEKTIQLAASCLNRDQKARPRMSE 398
P E R L D G ++ + +EK + L L D KAR E
Sbjct: 341 ----YPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEE 396
Query: 399 VVEALKPLPYLKDMASSSSYVQAMQAE 425
+ P+L+D + + E
Sbjct: 397 ALRH----PWLQDEDMKRKFQDLLSEE 419
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 99/253 (39%), Gaps = 53/253 (20%)
Query: 176 AEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLE-----NHLFRRSLPLPWSIR 230
E+ L L HP ++K I + + +V E M G L N + + + +
Sbjct: 64 TEIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 122
Query: 231 MKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYN---AKLSDFGLAKDGPEGDKT 287
M +A+ +LHE +I+RD K N+LL + K++DFG +K E T
Sbjct: 123 MLLAVQ------YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE---T 170
Query: 288 HVSTRVMGTYGYAAPEYVM---TGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNL 344
+ + GT Y APE ++ T D +S GV+L L+G
Sbjct: 171 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG--------------- 215
Query: 345 VEWARPQLGERRRFYRLIDPCLEGCFSI------KGAEKTIQLAASCLNRDQKARPRMSE 398
P E R L D G ++ + +EK + L L D KAR E
Sbjct: 216 ----YPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEE 271
Query: 399 VVEALKPLPYLKD 411
+ P+L+D
Sbjct: 272 ALRH----PWLQD 280
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 240 GLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 299
G+ LH +I+RD K SNI++ + K+ DFGLA+ G + V+ Y Y
Sbjct: 140 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMVPFVVTRY-Y 193
Query: 300 AAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
APE ++ D++S G ++ EM+ G
Sbjct: 194 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 240 GLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 299
G+ LH +I+RD K SNI++ + K+ DFGLA+ + T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTACTN---FMMTPYVVTRYY 191
Query: 300 AAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
APE ++ A D++S G ++ E++ G
Sbjct: 192 RAPEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 99/253 (39%), Gaps = 53/253 (20%)
Query: 176 AEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLE-----NHLFRRSLPLPWSIR 230
E+ L L HP ++K I + + +V E M G L N + + + +
Sbjct: 63 TEIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 121
Query: 231 MKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYN---AKLSDFGLAKDGPEGDKT 287
M +A+ +LHE +I+RD K N+LL + K++DFG +K E T
Sbjct: 122 MLLAVQ------YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE---T 169
Query: 288 HVSTRVMGTYGYAAPEYVM---TGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNL 344
+ + GT Y APE ++ T D +S GV+L L+G
Sbjct: 170 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG--------------- 214
Query: 345 VEWARPQLGERRRFYRLIDPCLEGCFSI------KGAEKTIQLAASCLNRDQKARPRMSE 398
P E R L D G ++ + +EK + L L D KAR E
Sbjct: 215 ----YPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEE 270
Query: 399 VVEALKPLPYLKD 411
+ P+L+D
Sbjct: 271 ALRH----PWLQD 279
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 99/253 (39%), Gaps = 53/253 (20%)
Query: 176 AEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLE-----NHLFRRSLPLPWSIR 230
E+ L L HP ++K I + + +V E M G L N + + + +
Sbjct: 64 TEIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 122
Query: 231 MKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYN---AKLSDFGLAKDGPEGDKT 287
M +A+ +LHE +I+RD K N+LL + K++DFG +K E T
Sbjct: 123 MLLAVQ------YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE---T 170
Query: 288 HVSTRVMGTYGYAAPEYVM---TGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNL 344
+ + GT Y APE ++ T D +S GV+L L+G
Sbjct: 171 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG--------------- 215
Query: 345 VEWARPQLGERRRFYRLIDPCLEGCFSI------KGAEKTIQLAASCLNRDQKARPRMSE 398
P E R L D G ++ + +EK + L L D KAR E
Sbjct: 216 ----YPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEE 271
Query: 399 VVEALKPLPYLKD 411
+ P+L+D
Sbjct: 272 ALRH----PWLQD 280
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 91/226 (40%), Gaps = 54/226 (23%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWL------AEVNYL 181
LLG GGFG VY G ++ LPVA+K + D + E EV L
Sbjct: 11 LLGSGGFGSVYSG---------IRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 182 GGLI--HPNLVKLIGCCIEDDQRLLVYE-----------FMPRGSLENHLFRRSLPLPWS 228
+ +++L+ D +L+ E RG+L+ L R W
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF---WQ 118
Query: 229 IRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLD-GEYNAKLSDFG---LAKDGPEG 284
+ L+A + V++RD K NIL+D KL DFG L KD
Sbjct: 119 V-----LEAVRHCH------NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT--- 164
Query: 285 DKTHVSTRVMGTYGYAAPEYVMTGHLTAKS-DVYSFGVVLLEMLTG 329
V T GT Y+ PE++ +S V+S G++L +M+ G
Sbjct: 165 ----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 99/253 (39%), Gaps = 53/253 (20%)
Query: 176 AEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLE-----NHLFRRSLPLPWSIR 230
E+ L L HP ++K I + + +V E M G L N + + + +
Sbjct: 64 TEIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 122
Query: 231 MKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYN---AKLSDFGLAKDGPEGDKT 287
M +A+ +LHE +I+RD K N+LL + K++DFG +K E T
Sbjct: 123 MLLAVQ------YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE---T 170
Query: 288 HVSTRVMGTYGYAAPEYVM---TGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNL 344
+ + GT Y APE ++ T D +S GV+L L+G
Sbjct: 171 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG--------------- 215
Query: 345 VEWARPQLGERRRFYRLIDPCLEGCFSI------KGAEKTIQLAASCLNRDQKARPRMSE 398
P E R L D G ++ + +EK + L L D KAR E
Sbjct: 216 ----YPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEE 271
Query: 399 VVEALKPLPYLKD 411
+ P+L+D
Sbjct: 272 ALRH----PWLQD 280
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 94/213 (44%), Gaps = 30/213 (14%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHK------EWLAEVNYLG 182
LG G F V K + TGL A K + + + E EV+ L
Sbjct: 20 LGSGQFAIVKK---------CREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILR 70
Query: 183 GLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRR-SLPLPWSIR-MKIALDAAKG 240
++H N++ L +L+ E + G L + L ++ SL + +K LD G
Sbjct: 71 QVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD---G 127
Query: 241 LAFLHEEAEKPVIYRDFKTSNI-LLDGEY---NAKLSDFGLAKDGPEGDKTHVSTRVMGT 296
+ +LH K + + D K NI LLD + KL DFGLA + +G + + GT
Sbjct: 128 VNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF---KNIFGT 181
Query: 297 YGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
+ APE V L ++D++S GV+ +L+G
Sbjct: 182 PEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 99/253 (39%), Gaps = 53/253 (20%)
Query: 176 AEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLE-----NHLFRRSLPLPWSIR 230
E+ L L HP ++K I + + +V E M G L N + + + +
Sbjct: 203 TEIEILKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 261
Query: 231 MKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYN---AKLSDFGLAKDGPEGDKT 287
M +A+ +LHE +I+RD K N+LL + K++DFG +K E T
Sbjct: 262 MLLAVQ------YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE---T 309
Query: 288 HVSTRVMGTYGYAAPEYVM---TGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNL 344
+ + GT Y APE ++ T D +S GV+L L+G
Sbjct: 310 SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG--------------- 354
Query: 345 VEWARPQLGERRRFYRLIDPCLEGCFSI------KGAEKTIQLAASCLNRDQKARPRMSE 398
P E R L D G ++ + +EK + L L D KAR E
Sbjct: 355 ----YPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEE 410
Query: 399 VVEALKPLPYLKD 411
+ P+L+D
Sbjct: 411 ALRH----PWLQD 419
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 65/150 (43%), Gaps = 14/150 (9%)
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK--IALDAAKGLAF 243
HPN++ L + LV E M G L + + R+ +S R + K + +
Sbjct: 80 HPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKF---FSEREASFVLHTIGKTVEY 136
Query: 244 LHEEAEKPVIYRDFKTSNILLDGEYN----AKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 299
LH + V++RD K SNIL E ++ DFG AK + ++ T +
Sbjct: 137 LHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTP--CYTANF 191
Query: 300 AAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
APE + D++S G++L ML G
Sbjct: 192 VAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 66/150 (44%), Gaps = 14/150 (9%)
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIR--MKIALDAAKGLAF 243
HPN++ L + +V E G L + + R+ +S R + K + +
Sbjct: 75 HPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKF---FSEREASAVLFTITKTVEY 131
Query: 244 LHEEAEKPVIYRDFKTSNILLDGEY----NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 299
LH + V++RD K SNIL E + ++ DFG AK + + T T +
Sbjct: 132 LHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQ-LRAENGLLXTPCY-TANF 186
Query: 300 AAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
APE + A D++S GV+L LTG
Sbjct: 187 VAPEVLERQGYDAACDIWSLGVLLYTXLTG 216
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 86/211 (40%), Gaps = 26/211 (12%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLA------EVNYLG 182
LG G F V K + TGL A K + + + ++ EV+ L
Sbjct: 19 LGSGQFAVVKK---------CREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 183 GLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLA 242
+ HPN++ L +L+ E + G L + L + L + G+
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVY 128
Query: 243 FLHEEAEKPVIYRDFKTSNI-LLDGEY---NAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 298
+LH + + D K NI LLD K+ DFGLA G++ + GT
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPA 182
Query: 299 YAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
+ APE V L ++D++S GV+ +L+G
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 99/237 (41%), Gaps = 40/237 (16%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKE-----WLAEVNYLGG 183
+G+G FG V+K TG VA+K + ++ KE L E+ L
Sbjct: 26 IGQGTFGEVFKA---------RHRKTGQKVALKKV---LMENEKEGFPITALREIKILQL 73
Query: 184 LIHPNLVKLIGCCIEDDQ--------RLLVYEFMPR---GSLENHLFRRSLPLPWSIRMK 232
L H N+V LI C LV++F G L N L + +L + M+
Sbjct: 74 LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRV-MQ 132
Query: 233 IALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKD---GPEGDKTHV 289
+ L+ GL ++H +++RD K +N+L+ + KL+DFGLA+
Sbjct: 133 MLLN---GLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRY 186
Query: 290 STRVMGTYGYAAPEYVM-TGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLV 345
RV+ T Y PE ++ D++ G ++ EM T M N + L+
Sbjct: 187 XNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALI 242
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 65/150 (43%), Gaps = 14/150 (9%)
Query: 186 HPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMK--IALDAAKGLAF 243
HPN++ L + LV E M G L + + R+ +S R + K + +
Sbjct: 80 HPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKF---FSEREASFVLHTIGKTVEY 136
Query: 244 LHEEAEKPVIYRDFKTSNILLDGEYN----AKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 299
LH + V++RD K SNIL E ++ DFG AK + ++ T +
Sbjct: 137 LHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTP--CYTANF 191
Query: 300 AAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
APE + D++S G++L ML G
Sbjct: 192 VAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 240 GLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 299
G+ LH +I+RD K SNI++ + K+ DFGLA+ G + V+ Y Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMEPEVVTRY-Y 191
Query: 300 AAPEYVMTGHLTAKSDVYSFGVVLLEMLTGR 330
APE ++ D++S G ++ EM+ +
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVCHK 222
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 96/233 (41%), Gaps = 47/233 (20%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTL--NHDGLQGHKEWLAEVNYLGGLI 185
L+G G +G V + + + VA+K + + L K L E+ L L
Sbjct: 60 LIGTGSYGHVCEAYDKLEKRV---------VAIKKILRVFEDLIDCKRILREIAILNRLN 110
Query: 186 HPNLVKLIGCCI-----EDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
H ++VK++ I + D+ +V E S LFR + L + + G
Sbjct: 111 HDHVVKVLDIVIPKDVEKFDELYVVLEIA--DSDFKKLFRTPVYLTELHIKTLLYNLLVG 168
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAK--DGPEGDKTHVS-------- 290
+ ++H +++RD K +N L++ + + K+ DFGLA+ D PE + +
Sbjct: 169 VKYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDM 225
Query: 291 ---------------TRVMGTYGYAAPEYV-MTGHLTAKSDVYSFGVVLLEML 327
T + T Y APE + + + T DV+S G + E+L
Sbjct: 226 NLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELL 278
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 240 GLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 299
G+ LH +I+RD K SNI++ + K+ DFGLA+ G ++ V+ Y Y
Sbjct: 176 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-Y 229
Query: 300 AAPEYVMTGHLTAKSDVYSFGVVLLEML 327
APE ++ D++S G ++ EM+
Sbjct: 230 RAPEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 240 GLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 299
G+ LH +I+RD K SNI++ + K+ DFGLA+ G ++ V+ Y Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRY-Y 191
Query: 300 AAPEYVMTGHLTAKSDVYSFGVVLLEML 327
APE ++ D++S G ++ EM+
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 240 GLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 299
G+ LH +I+RD K SNI++ + K+ DFGLA+ G ++ V+ Y Y
Sbjct: 131 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRY-Y 184
Query: 300 AAPEYVMTGHLTAKSDVYSFGVVLLEML 327
APE ++ D++S G ++ EM+
Sbjct: 185 RAPEVILGMGYKENVDIWSVGCIMGEMV 212
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 240 GLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 299
G+ LH +I+RD K SNI++ + K+ DFGLA+ G ++ V+ Y Y
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-Y 192
Query: 300 AAPEYVMTGHLTAKSDVYSFGVVLLEML 327
APE ++ D++S G ++ EM+
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGEMV 220
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 240 GLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 299
G+ LH +I+RD K SNI++ + K+ DFGLA+ G ++ V+ Y Y
Sbjct: 131 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-Y 184
Query: 300 AAPEYVMTGHLTAKSDVYSFGVVLLEML 327
APE ++ D++S G ++ EM+
Sbjct: 185 RAPEVILGMGYKENVDIWSVGCIMGEMV 212
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 240 GLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 299
G+ LH +I+RD K SNI++ + K+ DFGLA+ G ++ V+ Y Y
Sbjct: 132 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-Y 185
Query: 300 AAPEYVMTGHLTAKSDVYSFGVVLLEML 327
APE ++ D++S G ++ EM+
Sbjct: 186 RAPEVILGMGYKENVDIWSVGCIMGEMV 213
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 11/152 (7%)
Query: 184 LIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRS---LPLPWSIRMKIALDAAKG 240
L HP++V+L+ D +V+EFM L + +R+ ++ +
Sbjct: 85 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA 144
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNA---KLSDFGLAKDGPEGDKTHVSTRVMGTY 297
L + H+ +I+RD K +LL + N+ KL FG+A G+ V+ +GT
Sbjct: 145 LRYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQ--LGESGLVAGGRVGTP 199
Query: 298 GYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
+ APE V DV+ GV+L +L+G
Sbjct: 200 HFMAPEVVKREPYGKPVDVWGCGVILFILLSG 231
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 240 GLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 299
G+ LH +I+RD K SNI++ + K+ DFGLA+ G ++ V+ Y Y
Sbjct: 137 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-Y 190
Query: 300 AAPEYVMTGHLTAKSDVYSFGVVLLEML 327
APE ++ D++S G ++ EM+
Sbjct: 191 RAPEVILGMGYKENVDIWSVGCIMGEMV 218
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 240 GLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 299
G+ LH +I+RD K SNI++ + K+ DFGLA+ G ++ V+ Y Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-Y 191
Query: 300 AAPEYVMTGHLTAKSDVYSFGVVLLEML 327
APE ++ D++S G ++ EM+
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 240 GLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 299
G+ LH +I+RD K SNI++ + K+ DFGLA+ G ++ V+ Y Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-Y 191
Query: 300 AAPEYVMTGHLTAKSDVYSFGVVLLEML 327
APE ++ D++S G ++ EM+
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 240 GLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 299
G+ LH +I+RD K SNI++ + K+ DFGLA+ G ++ V+ Y Y
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-Y 192
Query: 300 AAPEYVMTGHLTAKSDVYSFGVVLLEML 327
APE ++ D++S G ++ EM+
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGEMV 220
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 240 GLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 299
G+ LH +I+RD K SNI++ + K+ DFGLA+ G ++ V+ Y Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRY-Y 191
Query: 300 AAPEYVMTGHLTAKSDVYSFGVVLLEML 327
APE ++ D++S G ++ EM+
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 240 GLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 299
G+ LH +I+RD K SNI++ + K+ DFGLA+ G ++ V+ Y Y
Sbjct: 176 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-Y 229
Query: 300 AAPEYVMTGHLTAKSDVYSFGVVLLEML 327
APE ++ D++S G ++ EM+
Sbjct: 230 RAPEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 240 GLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 299
G+ LH +I+RD K SNI++ + K+ DFGLA+ G ++ V+ Y Y
Sbjct: 132 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-Y 185
Query: 300 AAPEYVMTGHLTAKSDVYSFGVVLLEML 327
APE ++ D++S G ++ EM+
Sbjct: 186 RAPEVILGMGYKENVDIWSVGCIMGEMV 213
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 86/211 (40%), Gaps = 26/211 (12%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLA------EVNYLG 182
LG G F V K + TGL A K + + + ++ EV+ L
Sbjct: 19 LGSGQFAVVKK---------CREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 183 GLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLA 242
+ HPN++ L +L+ E + G L + L + L + G+
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVY 128
Query: 243 FLHEEAEKPVIYRDFKTSNI-LLDGEY---NAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 298
+LH + + D K NI LLD K+ DFGLA G++ + GT
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPE 182
Query: 299 YAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
+ APE V L ++D++S GV+ +L+G
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 240 GLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 299
G+ LH +I+RD K SNI++ + K+ DFGLA+ G ++ V+ Y Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRY-Y 191
Query: 300 AAPEYVMTGHLTAKSDVYSFGVVLLEML 327
APE ++ D++S G ++ EM+
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 240 GLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 299
G+ LH +I+RD K SNI++ + K+ DFGLA+ G ++ V+ Y Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTA--GTSFMMTPYVVTRY-Y 191
Query: 300 AAPEYVMTGHLTAKSDVYSFGVVLLEML 327
APE ++ D++S G ++ EM+
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 240 GLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 299
G+ LH +I+RD K SNI++ + K+ DFGLA+ G ++ V+ Y Y
Sbjct: 143 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-Y 196
Query: 300 AAPEYVMTGHLTAKSDVYSFGVVLLEMLTGR 330
APE ++ D++S G ++ EM+ +
Sbjct: 197 RAPEVILGMGYKENVDLWSVGCIMGEMVCHK 227
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 97/235 (41%), Gaps = 40/235 (17%)
Query: 128 LLGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHK------------EWL 175
LLG+GGFG V+ G + L VA+K + + + G L
Sbjct: 38 LLGKGGFGTVFAG---------HRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALL 88
Query: 176 AEVNYLGGLIHPNLVKLIGCCIEDDQRLLVYEF-MPRGSLENHLFRRSLPLPWSIRMKIA 234
+V GG HP +++L+ + +LV E +P L +++ + PL
Sbjct: 89 WKVGAGGG--HPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKG-PLGEGPSRCFF 145
Query: 235 LDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYN-AKLSDFG---LAKDGPEGDKTHVS 290
+ H V++RD K NIL+D AKL DFG L D P D
Sbjct: 146 GQVVAAIQHCHSRG---VVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFD--- 199
Query: 291 TRVMGTYGYAAPEYVMTGHLTA-KSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNL 344
GT Y+ PE++ A + V+S G++L +M+ G ++++ E L
Sbjct: 200 ----GTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILEAEL 250
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 240 GLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 299
G+ LH +I+RD K SNI++ + K+ DFGLA+ G + V+ Y Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMEPEVVTRY-Y 191
Query: 300 AAPEYVMTGHLTAKSDVYSFGVVLLEMLTGR 330
APE ++ D++S G ++ EM+ +
Sbjct: 192 RAPEVILGMGYKENVDLWSVGCIMGEMVCHK 222
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 99/237 (41%), Gaps = 40/237 (16%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKE-----WLAEVNYLGG 183
+G+G FG V+K TG VA+K + ++ KE L E+ L
Sbjct: 26 IGQGTFGEVFKA---------RHRKTGQKVALKKV---LMENEKEGFPITALREIKILQL 73
Query: 184 LIHPNLVKLIGCCIEDDQ--------RLLVYEFMPR---GSLENHLFRRSLPLPWSIRMK 232
L H N+V LI C LV++F G L N L + +L + M+
Sbjct: 74 LKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRV-MQ 132
Query: 233 IALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKD---GPEGDKTHV 289
+ L+ GL ++H +++RD K +N+L+ + KL+DFGLA+
Sbjct: 133 MLLN---GLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRY 186
Query: 290 STRVMGTYGYAAPEYVM-TGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLV 345
RV+ T Y PE ++ D++ G ++ EM T M N + L+
Sbjct: 187 XNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALI 242
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 11/152 (7%)
Query: 184 LIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRS---LPLPWSIRMKIALDAAKG 240
L HP++V+L+ D +V+EFM L + +R+ ++ +
Sbjct: 83 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA 142
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLDGEYNA---KLSDFGLAKDGPEGDKTHVSTRVMGTY 297
L + H+ +I+RD K +LL + N+ KL FG+A G+ V+ +GT
Sbjct: 143 LRYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGVAIQ--LGESGLVAGGRVGTP 197
Query: 298 GYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
+ APE V DV+ GV+L +L+G
Sbjct: 198 HFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 99/237 (41%), Gaps = 40/237 (16%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKE-----WLAEVNYLGG 183
+G+G FG V+K TG VA+K + ++ KE L E+ L
Sbjct: 25 IGQGTFGEVFKA---------RHRKTGQKVALKKV---LMENEKEGFPITALREIKILQL 72
Query: 184 LIHPNLVKLIGCCIEDDQ--------RLLVYEFMPR---GSLENHLFRRSLPLPWSIRMK 232
L H N+V LI C LV++F G L N L + +L + M+
Sbjct: 73 LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRV-MQ 131
Query: 233 IALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKD---GPEGDKTHV 289
+ L+ GL ++H +++RD K +N+L+ + KL+DFGLA+
Sbjct: 132 MLLN---GLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRY 185
Query: 290 STRVMGTYGYAAPEYVM-TGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLV 345
RV+ T Y PE ++ D++ G ++ EM T M N + L+
Sbjct: 186 XNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALI 241
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 240 GLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 299
G+ LH +I+RD K SNI++ + K+ DFGLA+ + T + T Y
Sbjct: 136 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TASTNFMMTPYVVTRYY 189
Query: 300 AAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
APE ++ D++S G ++ E++ G
Sbjct: 190 RAPEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 240 GLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGY 299
G+ LH +I+RD K SNI++ + K+ DFGLA+ G ++ V+ Y Y
Sbjct: 132 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPYVVTRY-Y 185
Query: 300 AAPEYVMTGHLTAKSDVYSFGVVLLEMLTGR 330
APE ++ D++S G ++ EM+ +
Sbjct: 186 RAPEVILGMGYKENVDLWSVGCIMGEMVCHK 216
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 101/258 (39%), Gaps = 30/258 (11%)
Query: 153 GTGLPVAVKTLNHDGLQGHKEWLAEVNYLGGLIHPNLVKLIGCCIEDD--QRLLVYEFMP 210
G + V V + + +++ E L HPN++ ++G C L+ + P
Sbjct: 33 GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWXP 92
Query: 211 RGSLENHLFR-RSLPLPWSIRMKIALDAAKGLAFLHEEAEKPVIYRD-FKTSNILLDGEY 268
GSL N L + + S +K ALD A+G AFLH +P+I R + ++ +D +
Sbjct: 93 YGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAFLH--TLEPLIPRHALNSRSVXIDEDX 150
Query: 269 NAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
A++S + + + V PE T +A D +SF V+L E++T
Sbjct: 151 TARISXADVKFSFQSPGRXYAPAWVAPEALQKKPE--DTNRRSA--DXWSFAVLLWELVT 206
Query: 329 GRRSMD--KNRPNGEHNLVEWARPQLGERRRFYRLIDPCLEGCFSIKGAEKTIQLAASCL 386
N G +E RP I P + S +L C
Sbjct: 207 REVPFADLSNXEIGXKVALEGLRPT----------IPPGISPHVS--------KLXKICX 248
Query: 387 NRDQKARPRMSEVVEALK 404
N D RP+ +V L+
Sbjct: 249 NEDPAKRPKFDXIVPILE 266
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 99/237 (41%), Gaps = 40/237 (16%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKE-----WLAEVNYLGG 183
+G+G FG V+K TG VA+K + ++ KE L E+ L
Sbjct: 26 IGQGTFGEVFKA---------RHRKTGQKVALKKV---LMENEKEGFPITALREIKILQL 73
Query: 184 LIHPNLVKLIGCCIEDDQ--------RLLVYEFMPR---GSLENHLFRRSLPLPWSIRMK 232
L H N+V LI C LV++F G L N L + +L + M+
Sbjct: 74 LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRV-MQ 132
Query: 233 IALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKD---GPEGDKTHV 289
+ L+ GL ++H +++RD K +N+L+ + KL+DFGLA+
Sbjct: 133 MLLN---GLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRY 186
Query: 290 STRVMGTYGYAAPEYVM-TGHLTAKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLV 345
RV+ T Y PE ++ D++ G ++ EM T M N + L+
Sbjct: 187 XNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALI 242
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 86/211 (40%), Gaps = 26/211 (12%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLA------EVNYLG 182
LG G F V K + TGL A K + + + ++ EV+ L
Sbjct: 18 LGSGQFAVVKK---------CREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 68
Query: 183 GLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLA 242
+ HPN++ L +L+ E + G L + L + L + G+
Sbjct: 69 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVY 127
Query: 243 FLHEEAEKPVIYRDFKTSNI-LLDGEY---NAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 298
+LH + + D K NI LLD K+ DFGLA G++ + GT
Sbjct: 128 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPE 181
Query: 299 YAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
+ APE V L ++D++S GV+ +L+G
Sbjct: 182 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 86/211 (40%), Gaps = 26/211 (12%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLA------EVNYLG 182
LG G F V K + TGL A K + + + ++ EV+ L
Sbjct: 19 LGSGQFAVVKK---------CREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 183 GLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLA 242
+ HPN++ L +L+ E + G L + L + L + G+
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVY 128
Query: 243 FLHEEAEKPVIYRDFKTSNI-LLDGEY---NAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 298
+LH + + D K NI LLD K+ DFGLA G++ + GT
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPE 182
Query: 299 YAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
+ APE V L ++D++S GV+ +L+G
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 86/211 (40%), Gaps = 26/211 (12%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLA------EVNYLG 182
LG G F V K + TGL A K + + + ++ EV+ L
Sbjct: 19 LGSGQFAVVKK---------CREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 183 GLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLA 242
+ HPN++ L +L+ E + G L + L + L + G+
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVY 128
Query: 243 FLHEEAEKPVIYRDFKTSNI-LLDGEY---NAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 298
+LH + + D K NI LLD K+ DFGLA G++ + GT
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPE 182
Query: 299 YAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
+ APE V L ++D++S GV+ +L+G
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 86/211 (40%), Gaps = 26/211 (12%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLA------EVNYLG 182
LG G F V K + TGL A K + + + ++ EV+ L
Sbjct: 19 LGSGQFAVVKK---------CREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 183 GLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLA 242
+ HPN++ L +L+ E + G L + L + L + G+
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVY 128
Query: 243 FLHEEAEKPVIYRDFKTSNI-LLDGEY---NAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 298
+LH + + D K NI LLD K+ DFGLA G++ + GT
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPE 182
Query: 299 YAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
+ APE V L ++D++S GV+ +L+G
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 86/211 (40%), Gaps = 26/211 (12%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLA------EVNYLG 182
LG G F V K + TGL A K + + + ++ EV+ L
Sbjct: 18 LGSGQFAVVKK---------CREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 68
Query: 183 GLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLA 242
+ HPN++ L +L+ E + G L + L + L + G+
Sbjct: 69 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVY 127
Query: 243 FLHEEAEKPVIYRDFKTSNI-LLDGEY---NAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 298
+LH + + D K NI LLD K+ DFGLA G++ + GT
Sbjct: 128 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPE 181
Query: 299 YAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
+ APE V L ++D++S GV+ +L+G
Sbjct: 182 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 86/211 (40%), Gaps = 26/211 (12%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLA------EVNYLG 182
LG G F V K + TGL A K + + + ++ EV+ L
Sbjct: 19 LGSGKFAVVKK---------CREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 183 GLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLA 242
+ HPN++ L +L+ E + G L + L + L + G+
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVY 128
Query: 243 FLHEEAEKPVIYRDFKTSNI-LLDGEY---NAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 298
+LH + + D K NI LLD K+ DFGLA G++ + GT
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPE 182
Query: 299 YAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
+ APE V L ++D++S GV+ +L+G
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 86/211 (40%), Gaps = 26/211 (12%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLA------EVNYLG 182
LG G F V K + TGL A K + + + ++ EV+ L
Sbjct: 19 LGSGQFAVVKK---------CREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 183 GLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLA 242
+ HPN++ L +L+ E + G L + L + L + G+
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVY 128
Query: 243 FLHEEAEKPVIYRDFKTSNI-LLDGEY---NAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 298
+LH + + D K NI LLD K+ DFGLA G++ + GT
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPE 182
Query: 299 YAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
+ APE V L ++D++S GV+ +L+G
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 86/211 (40%), Gaps = 26/211 (12%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLA------EVNYLG 182
LG G F V K + TGL A K + + + ++ EV+ L
Sbjct: 19 LGSGQFAVVKK---------CREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 183 GLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLA 242
+ HPN++ L +L+ E + G L + L + L + G+
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVY 128
Query: 243 FLHEEAEKPVIYRDFKTSNI-LLDGEY---NAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 298
+LH + + D K NI LLD K+ DFGLA G++ + GT
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPE 182
Query: 299 YAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
+ APE V L ++D++S GV+ +L+G
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 15/104 (14%)
Query: 231 MKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVS 290
M +A+D+ L ++H RD K N+LLD + +L+DFG + D T S
Sbjct: 200 MVLAIDSIHQLHYVH---------RDIKPDNVLLDVNGHIRLADFGSCLKMND-DGTVQS 249
Query: 291 TRVMGTYGYAAPEYVMT-----GHLTAKSDVYSFGVVLLEMLTG 329
+ +GT Y +PE + G + D +S GV + EML G
Sbjct: 250 SVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYG 293
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 15/104 (14%)
Query: 231 MKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDGPEGDKTHVS 290
M +A+D+ L ++H RD K N+LLD + +L+DFG + D T S
Sbjct: 184 MVLAIDSIHQLHYVH---------RDIKPDNVLLDVNGHIRLADFGSCLKMND-DGTVQS 233
Query: 291 TRVMGTYGYAAPEYVMT-----GHLTAKSDVYSFGVVLLEMLTG 329
+ +GT Y +PE + G + D +S GV + EML G
Sbjct: 234 SVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYG 277
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 239 KGLAFLHEEAEKPVIYRDFKTSNILLDGEY---NAKLSDFGLAKDGPEGDKTHVSTRVMG 295
+G+ +LH+ +++ D K NILL Y + K+ DFG+++ + +MG
Sbjct: 142 EGVYYLHQ---NNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELR---EIMG 195
Query: 296 TYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLT 328
T Y APE + +T +D+++ G++ +LT
Sbjct: 196 TPEYLAPEILNYDPITTATDMWNIGIIAYMLLT 228
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 94/219 (42%), Gaps = 31/219 (14%)
Query: 122 SFRPECLLGEGGFG-CVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLAEVNY 180
SF P+ +LG G G VY+G + A + LP + + + L E +
Sbjct: 25 SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRI---LPECFSFADRE-----VQLLRESDE 76
Query: 181 LGGLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKG 240
HPN+++ C +D Q + + +L+ ++ ++ + + G
Sbjct: 77 -----HPNVIRYF-CTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSG 130
Query: 241 LAFLHEEAEKPVIYRDFKTSNILLD-----GEYNAKLSDFGLAKDGPEGDKTHVSTR--- 292
LA LH +++RD K NIL+ G+ A +SDFGL K G H +R
Sbjct: 131 LAHLHS---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVG--RHSFSRRSG 185
Query: 293 VMGTYGYAAPEYVMTG---HLTAKSDVYSFGVVLLEMLT 328
V GT G+ APE + + T D++S G V +++
Sbjct: 186 VPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVIS 224
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 86/211 (40%), Gaps = 26/211 (12%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLA------EVNYLG 182
LG G F V K + TGL A K + + + ++ EV+ L
Sbjct: 19 LGSGQFAVVKK---------CREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 183 GLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLA 242
+ HPN++ L +L+ E + G L + L + L + G+
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVY 128
Query: 243 FLHEEAEKPVIYRDFKTSNI-LLDGEY---NAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 298
+LH + + D K NI LLD K+ DFGLA G++ + GT
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPE 182
Query: 299 YAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
+ APE V L ++D++S GV+ +L+G
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 86/211 (40%), Gaps = 26/211 (12%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLA------EVNYLG 182
LG G F V K + TGL A K + + + ++ EV+ L
Sbjct: 19 LGSGQFAVVKK---------CREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 183 GLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLA 242
+ HPN++ L +L+ E + G L + L + L + G+
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVY 128
Query: 243 FLHEEAEKPVIYRDFKTSNI-LLDGEY---NAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 298
+LH + + D K NI LLD K+ DFGLA G++ + GT
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPE 182
Query: 299 YAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
+ APE V L ++D++S GV+ +L+G
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 86/211 (40%), Gaps = 26/211 (12%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLA------EVNYLG 182
LG G F V K + TGL A K + + + ++ EV+ L
Sbjct: 19 LGSGVFAVVKK---------CREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 183 GLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLA 242
+ HPN++ L +L+ E + G L + L + L + G+
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVY 128
Query: 243 FLHEEAEKPVIYRDFKTSNI-LLDGEY---NAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 298
+LH + + D K NI LLD K+ DFGLA G++ + GT
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPE 182
Query: 299 YAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
+ APE V L ++D++S GV+ +L+G
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 66/159 (41%), Gaps = 28/159 (17%)
Query: 183 GLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAK--- 239
L HPN+V+ + +V E+ G L + + + D A+
Sbjct: 71 SLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAG---------RFSEDEARFFF 121
Query: 240 -----GLAFLHEEAEKPVIYRDFKTSNILLDGE--YNAKLSDFGLAKDGPEGDKTHVSTR 292
G+++ H V +RD K N LLDG K++DFG +K H +
Sbjct: 122 QQLISGVSYAHA---MQVAHRDLKLENTLLDGSPAPRLKIADFGYSK----ASVLHSQPK 174
Query: 293 -VMGTYGYAAPEYVMTGHLTAK-SDVYSFGVVLLEMLTG 329
+GT Y APE ++ K +DV+S GV L ML G
Sbjct: 175 SAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 86/211 (40%), Gaps = 26/211 (12%)
Query: 129 LGEGGFGCVYKGWINMNGTATVKPGTGLPVAVKTLNHDGLQGHKEWLA------EVNYLG 182
LG G F V K + TGL A K + + + ++ EV+ L
Sbjct: 19 LGSGQFAVVKK---------CREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 183 GLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLA 242
+ HPN++ L +L+ E + G L + L + L + G+
Sbjct: 70 EIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVY 128
Query: 243 FLHEEAEKPVIYRDFKTSNI-LLDGEY---NAKLSDFGLAKDGPEGDKTHVSTRVMGTYG 298
+LH + + D K NI LLD K+ DFGLA G++ + GT
Sbjct: 129 YLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPE 182
Query: 299 YAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
+ APE V L ++D++S GV+ +L+G
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 64/158 (40%), Gaps = 26/158 (16%)
Query: 183 GLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAK--- 239
L HPN+V+ + +V E+ G L + + + D A+
Sbjct: 71 SLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAG---------RFSEDEARFFF 121
Query: 240 -----GLAFLHEEAEKPVIYRDFKTSNILLDGE--YNAKLSDFGLAKDGPEGDKTHVSTR 292
G+++ H V +RD K N LLDG K+ DFG +K +
Sbjct: 122 QQLISGVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ---PKS 175
Query: 293 VMGTYGYAAPEYVMTGHLTAK-SDVYSFGVVLLEMLTG 329
+GT Y APE ++ K +DV+S GV L ML G
Sbjct: 176 TVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 65/158 (41%), Gaps = 26/158 (16%)
Query: 183 GLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAK--- 239
L HPN+V+ + ++ E+ G L + + + D A+
Sbjct: 72 SLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAG---------RFSEDEARFFF 122
Query: 240 -----GLAFLHEEAEKPVIYRDFKTSNILLDGE--YNAKLSDFGLAKDGPEGDKTHVSTR 292
G+++ H + +RD K N LLDG K+ DFG +K + +
Sbjct: 123 QQLLSGVSYCHS---MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST-- 177
Query: 293 VMGTYGYAAPEYVMTGHLTAK-SDVYSFGVVLLEMLTG 329
+GT Y APE ++ K +DV+S GV L ML G
Sbjct: 178 -VGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVG 214
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 64/158 (40%), Gaps = 26/158 (16%)
Query: 183 GLIHPNLVKLIGCCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAK--- 239
L HPN+V+ + +V E+ G L + + + D A+
Sbjct: 70 SLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAG---------RFSEDEARFFF 120
Query: 240 -----GLAFLHEEAEKPVIYRDFKTSNILLDGE--YNAKLSDFGLAKDGPEGDKTHVSTR 292
G+++ H V +RD K N LLDG K+ DFG +K +
Sbjct: 121 QQLISGVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ---PKS 174
Query: 293 VMGTYGYAAPEYVMTGHLTAK-SDVYSFGVVLLEMLTG 329
+GT Y APE ++ K +DV+S GV L ML G
Sbjct: 175 TVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 212
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 50/114 (43%), Gaps = 7/114 (6%)
Query: 213 SLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDGEYNAKL 272
SL+ H LP + D LA LH + +++ D K +NI L KL
Sbjct: 142 SLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQG---LVHLDVKPANIFLGPRGRCKL 198
Query: 273 SDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEM 326
DFGL + V G Y APE + + TA +DV+S G+ +LE+
Sbjct: 199 GDFGLLVELGTAGAGEVQE---GDPRYMAPELLQGSYGTA-ADVFSLGLTILEV 248
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 59/131 (45%), Gaps = 20/131 (15%)
Query: 252 VIYRDFKTSNILLD-GEYNAKLSDFG---LAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 307
V++RD K NIL+D KL DFG L KD V T GT Y+ PE++
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-------VYTDFDGTRVYSPPEWIRY 230
Query: 308 GHLTAKS-DVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPQLGERRRFYRLIDPCL 366
+S V+S G++L +M+ G + + E R Q+ R+R +
Sbjct: 231 HRYHGRSAAVWSLGILLYDMVCGDIPFEHDE--------EIIRGQVFFRQRVSSECQHLI 282
Query: 367 EGCFSIKGAEK 377
C +++ +++
Sbjct: 283 RWCLALRPSDR 293
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 58/127 (45%), Gaps = 18/127 (14%)
Query: 205 VYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILL 264
+YE + + + SLPL +R K A + L LH+ +I+ D K NILL
Sbjct: 185 LYELIKKNKFQGF----SLPL---VR-KFAHSILQCLDALHKNR---IIHCDLKPENILL 233
Query: 265 --DGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVV 322
G K+ DFG + + T + +R Y APE ++ D++S G +
Sbjct: 234 KQQGRSGIKVIDFGSSCYEHQRVYTXIQSRF-----YRAPEVILGARYGMPIDMWSLGCI 288
Query: 323 LLEMLTG 329
L E+LTG
Sbjct: 289 LAELLTG 295
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 58/127 (45%), Gaps = 18/127 (14%)
Query: 205 VYEFMPRGSLENHLFRRSLPLPWSIRMKIALDAAKGLAFLHEEAEKPVIYRDFKTSNILL 264
+YE + + + SLPL +R K A + L LH+ +I+ D K NILL
Sbjct: 185 LYELIKKNKFQGF----SLPL---VR-KFAHSILQCLDALHKNR---IIHCDLKPENILL 233
Query: 265 --DGEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVV 322
G K+ DFG + + T + +R Y APE ++ D++S G +
Sbjct: 234 KQQGRSGIKVIDFGSSCYEHQRVYTXIQSRF-----YRAPEVILGARYGMPIDMWSLGCI 288
Query: 323 LLEMLTG 329
L E+LTG
Sbjct: 289 LAELLTG 295
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 10/101 (9%)
Query: 232 KIALDAAKGLAFLHEEAEKPVIYRDFKTSNILLDG-EYNA--KLSDFGLAKDGPEGDKTH 288
+I D + FLH + +RD K N+L E +A KL+DFG AK E +
Sbjct: 113 EIMRDIGTAIQFLHSHN---IAHRDVKPENLLYTSKEKDAVLKLTDFGFAK---ETTQNA 166
Query: 289 VSTRVMGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEMLTG 329
+ T Y Y APE + D++S GV++ +L G
Sbjct: 167 LQTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 206
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.136 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,426,486
Number of Sequences: 62578
Number of extensions: 599361
Number of successful extensions: 3983
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 826
Number of HSP's successfully gapped in prelim test: 255
Number of HSP's that attempted gapping in prelim test: 1503
Number of HSP's gapped (non-prelim): 1143
length of query: 476
length of database: 14,973,337
effective HSP length: 102
effective length of query: 374
effective length of database: 8,590,381
effective search space: 3212802494
effective search space used: 3212802494
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 53 (25.0 bits)