BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011853
(476 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6NPN3|C3H58_ARATH Zinc finger CCCH domain-containing protein 58 OS=Arabidopsis
thaliana GN=At5g18550 PE=2 SV=1
Length = 465
Score = 486 bits (1250), Expect = e-136, Method: Compositional matrix adjust.
Identities = 286/492 (58%), Positives = 342/492 (69%), Gaps = 45/492 (9%)
Query: 1 MERHGRVSEG-SQSDPSPEWTAPGTETGPEG---------LGVGAESYPERPDEADCIHY 50
MER+G E S+SDPS EW+A GTETG E G G E++PERPDE DCI+Y
Sbjct: 1 MERYGGAGEDESRSDPSHEWSAQGTETGIEASMWRLGLRGGGGGGETFPERPDEPDCIYY 60
Query: 51 VRTGFCAYGSRCRFNHPRDRGSVMGAARAGGGEFPERVGQPVCQYYMRTGTCKYGASCKY 110
+RTG C YGSRCRFNHPR+R V+G R GEFPER+GQPVCQ++MRTGTCK+GASCKY
Sbjct: 61 LRTGVCGYGSRCRFNHPRNRAPVLGGLRTEAGEFPERMGQPVCQHFMRTGTCKFGASCKY 120
Query: 111 HHPRQGAG--SVSNVSLNYYGYPLRPGEKECSYYMKTRQCKFGATCKFHHPQPAGVPAPT 168
HHPRQG G SV+ VSLNY G+PLRPGEKECSY+M+T QCKFG+TC++HHP P GV AP+
Sbjct: 121 HHPRQGGGGDSVTPVSLNYMGFPLRPGEKECSYFMRTGQCKFGSTCRYHHPVPPGVQAPS 180
Query: 169 PSPAPQVAAVPTPVPAPALYPPLQSPSVPSAQQYGVVVARPPLLHGSYVQGP--YGPVLV 226
Q++A PT +YP LQS +VPS+QQYGVV+ARP LL GSYVQ P YG +++
Sbjct: 181 QQQQQQLSAGPT------MYPSLQSQTVPSSQQYGVVLARPQLLPGSYVQSPYGYGQMVL 234
Query: 227 SPSMFSLQGWSPYATSLNPISSPGTGTQSSVGSSSIYGITQLSASAPAYTGTYQSLPSSV 286
P M GW+PY S++ + SP GTQ S+G+SS+YGIT LS SAPA YQS PSS
Sbjct: 235 PPGMVPYSGWNPYQASVSAMPSP--GTQPSMGTSSVYGITPLSPSAPA----YQSGPSST 288
Query: 287 GPSSSSQKEHPFPERPGQQECQYYMKTGDCKFGSSCRFHHPRELIVPKMDVTLSPFGLPL 346
G S KE FP+RP Q ECQY+M+TGDCKFG+SCRFHHP E P+ TLS GLPL
Sbjct: 289 G---VSNKEQTFPQRPEQPECQYFMRTGDCKFGTSCRFHHPMEAASPEAS-TLSHIGLPL 344
Query: 347 RPGAAPCTHYVQRGVCKFGPACKFDH--PMGMLSYSPSASSLADMPVAPYPVGSSIGTLA 404
RPGA PCTH+ Q G+CKFGPACKFDH LSYSPS SSL DMPVAPYP SS+GTLA
Sbjct: 345 RPGAVPCTHFAQHGICKFGPACKFDHSLGSSSLSYSPSPSSLTDMPVAPYP--SSLGTLA 402
Query: 405 PSSASSDLRPELISGSSKDSVSTRMSSSVSISSGSVGSILSKSGPVPHSSMQQSGQSSGP 464
PSS SSD ELIS SS + ++T S ++++G S P P +
Sbjct: 403 PSS-SSDQCTELISSSSIEPITTTTGGSETVAAGVSSMTSDVSHPEPAET---------- 451
Query: 465 STADDSSAEART 476
+ D +S EA+T
Sbjct: 452 NKGDSASNEAKT 463
>sp|Q84W91|C3H32_ARATH Zinc finger CCCH domain-containing protein 32 OS=Arabidopsis
thaliana GN=At2g47850 PE=2 SV=2
Length = 468
Score = 461 bits (1185), Expect = e-129, Method: Compositional matrix adjust.
Identities = 246/449 (54%), Positives = 313/449 (69%), Gaps = 32/449 (7%)
Query: 9 EGSQSDPSPEWTAPGTETGPEG----LGVGAESYPERPDEADCIHYVRTGFCAYGSRCRF 64
GSQS +P+WT +TG + LG+G++SYPERP DC +Y+RTG C YG+RCR+
Sbjct: 9 NGSQSAQAPDWTPADADTGLQESMWRLGLGSDSYPERPGAPDCAYYMRTGVCGYGNRCRY 68
Query: 65 NHPRDRGSVMGAARAGGGEFPERVGQPVCQYYMRTGTCKYGASCKYHHPRQGAGSVSNVS 124
NHPRDR SV RA G ++PER G+P CQ+Y++TGTCK+GASCK+HHP+ GS+S+V
Sbjct: 69 NHPRDRASVEATVRATG-QYPERFGEPPCQFYLKTGTCKFGASCKFHHPKNAGGSMSHVP 127
Query: 125 LNYYGYPLRPGEKECSYYMKTRQCKFGATCKFHHPQPAGVPAPTPSPAPQVAAVPTPVPA 184
LN YGYP+R G+ ECSYY+KT QCKFG TCKFHHPQPAG P P P A
Sbjct: 128 LNIYGYPVREGDNECSYYLKTGQCKFGITCKFHHPQPAGTTVPPP-----------PASA 176
Query: 185 PALYPPLQSPSVPSAQQYG-----VVVARPPLLHGSYVQGPYGPVLVSPSMFSLQGWSPY 239
P YP +QS +P QYG + VAR LL GSY+QG YGP+L++P + + GWSPY
Sbjct: 177 PQFYPSVQS-LMP--DQYGGPSSSLRVART-LLPGSYMQGAYGPMLLTPGVVPIPGWSPY 232
Query: 240 ATSLNPISSPGTGTQSSVGSSSIYGITQLSASAPAYTGTYQSLPSSVGPSSSSQKEHPFP 299
+ ++P SPG Q +VG++S+YG+TQL+++ P+ G Y SL S P+ QKE FP
Sbjct: 233 SAPVSPALSPGA--QHAVGATSLYGVTQLTSTTPSLPGVYPSLSS---PTGVIQKEQAFP 287
Query: 300 ERPGQQECQYYMKTGDCKFGSSCRFHHPRELIVPKMDVTLSPFGLPLRPGAAPCTHYVQR 359
ERPG+ ECQYY+KTGDCKFG+SC+FHHPR+ + P+ + LSP GLPLRPG CT YVQ
Sbjct: 288 ERPGEPECQYYLKTGDCKFGTSCKFHHPRDRVPPRANCVLSPIGLPLRPGVQRCTFYVQN 347
Query: 360 GVCKFGPACKFDHPMGMLSYSPSASSLADMPVAPYPVGSSIGTLAPSSASSDLRPELISG 419
G CKFG CKFDHPMG + Y+PSASSLAD PVAPYPV S +G LA + +SS ELI+G
Sbjct: 348 GFCKFGSTCKFDHPMGTIRYNPSASSLADAPVAPYPVSSLLGALAAAPSSSST--ELIAG 405
Query: 420 SSKDSVSTRMSSSVSISSGSVGSILSKSG 448
+KD+ T + +S S S+ S G I S+SG
Sbjct: 406 GAKDAYMTGVPTSRSTSNISAGLIFSQSG 434
>sp|Q9SQU4|C3H34_ARATH Zinc finger CCCH domain-containing protein 34 OS=Arabidopsis
thaliana GN=At3g06410 PE=2 SV=2
Length = 462
Score = 442 bits (1136), Expect = e-123, Method: Compositional matrix adjust.
Identities = 254/413 (61%), Positives = 299/413 (72%), Gaps = 27/413 (6%)
Query: 1 MERHGR-VSEGSQSDPSPEWTAPGTETGPEG----LGVGA--------ESYPERPDEADC 47
MER+GR EGS+SDPS EWT+ G ET E LG+ ESYPERPDE DC
Sbjct: 1 MERYGRPGEEGSRSDPSLEWTSHGGETAVEAPMWRLGLSGGGGGGGGGESYPERPDEPDC 60
Query: 48 IHYVRTGFCAYGSRCRFNHPRDRGSVMGAARAGGGEFPERVGQPVCQYYMRTGTCKYGAS 107
I+Y+RTG C YGSRCRFNHPRDRG+V+G R G PER+G PVCQ++MRTGTCK+GAS
Sbjct: 61 IYYLRTGVCGYGSRCRFNHPRDRGAVIGGVRGEAGALPERMGHPVCQHFMRTGTCKFGAS 120
Query: 108 CKYHHPRQ--GAGSVSNVSLNYYGYPLRPGEKECSYYMKTRQCKFGATCKFHHPQPAGVP 165
CKYHHPRQ G GSV+ VSL+Y GYPLRPGEKECSYY++T QCKFG TC+F+HP P V
Sbjct: 121 CKYHHPRQGGGGGSVAPVSLSYLGYPLRPGEKECSYYLRTGQCKFGLTCRFNHPVPLAVQ 180
Query: 166 APTPSPAPQVAAVPTPVPAPALYPPLQSPSVPSAQQYGVVVARPPLLHGSYVQGPYG-PV 224
P P Q +YP LQS S+PS+QQYG+V+ RP L GSY+Q PYG P+
Sbjct: 181 GPPQQPQQQQPQ--PQPQLQTIYPTLQSQSIPSSQQYGLVLTRPSFLTGSYLQSPYGPPM 238
Query: 225 LVSPSMFSLQGWSPYATSLNPISSPGTGTQSSVGSSSIYGITQLSASAPAYTGTYQSLPS 284
++ P M GW+PY SL+ + SP GTQ S+GSSSIYG+T LS SA AYTGTYQS+PS
Sbjct: 239 VLPPGMVPYSGWNPYQASLSAMPSP--GTQPSIGSSSIYGLTPLSPSATAYTGTYQSVPS 296
Query: 285 SVGPSSSSQKEHPFPERPGQQECQYYMKTGDCKFGSSCRFHHPRELIVPKMDVTLSPFGL 344
S+S+ KE FP+RP Q ECQY+M+TGDCKFGSSCR+HHP + + PK + LS GL
Sbjct: 297 ----SNSTSKE--FPQRPDQPECQYFMRTGDCKFGSSCRYHHPVDAVPPKTGIVLSSIGL 350
Query: 345 PLRPGAAPCTHYVQRGVCKFGPACKFDH-PMGMLSYSPSASSLADMPVAPYPV 396
PLRPG A CTH+ Q G+CKFGPACKFDH LSYSPSASSL DMPVAPYP+
Sbjct: 351 PLRPGVAQCTHFAQHGICKFGPACKFDHSMSSSLSYSPSASSLTDMPVAPYPI 403
>sp|Q5NAW2|C3H6_ORYSJ Zinc finger CCCH domain-containing protein 6 OS=Oryza sativa subsp.
japonica GN=Os01g0258700 PE=2 SV=2
Length = 476
Score = 437 bits (1124), Expect = e-122, Method: Compositional matrix adjust.
Identities = 230/428 (53%), Positives = 290/428 (67%), Gaps = 32/428 (7%)
Query: 39 PERPDEADCIHYVRTGFCAYGSRCRFNHPRDRGSVM---GAARAGGGEFPERVGQPVCQY 95
PERP E DC++Y+RTG C +G RCR+NHPRDRG GA A ++PER GQP+C+Y
Sbjct: 57 PERPGEEDCVYYLRTGACGFGDRCRYNHPRDRGGTEFGGGARNAAALDYPERAGQPICEY 116
Query: 96 YMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPGEKECSYYMKTRQCKFGATCK 155
YM+TGTCK+G +CKYHHP+Q G+V V LN G+P+R GEKECSYYMKT QCKFG TCK
Sbjct: 117 YMKTGTCKFGTNCKYHHPKQ-DGAVLPVMLNNSGFPIRLGEKECSYYMKTGQCKFGTTCK 175
Query: 156 FHHPQPAGVPAPTPSPAPQVAAVPTPVPAPALYPPLQSPSVPSAQQYGVV----VARPPL 211
FHHP+ GVP P +YPPLQSPS+ S Y + + RPP+
Sbjct: 176 FHHPEFGGVPM-----------------TPGIYPPLQSPSIASPHPYASLANWQMGRPPV 218
Query: 212 LHGSYVQGPYGPVLVSPSMFSLQGWSPYATSLNPISSPGTGTQSSVGSSSIYGITQL-SA 270
+ GSY+ G Y P+++S M LQGWSPY S+NP+ S G Q +V + +YG+ S+
Sbjct: 219 VPGSYIPGSYTPMMLSSGMIPLQGWSPYPASVNPVVS--GGAQQNVQAGPVYGMGHHGSS 276
Query: 271 SAPAYTGTYQSLPSSVGPSSSSQKEHPFPERPGQQECQYYMKTGDCKFGSSCRFHHPREL 330
S AY G Y SS G SS++Q+EH FPERPGQ +CQYYM+TGDCKFG++C++HHPREL
Sbjct: 277 STIAYGGPYVPYASSTGQSSNNQQEHGFPERPGQPDCQYYMRTGDCKFGATCKYHHPREL 336
Query: 331 IVPKMDVTLSPFGLPLRPGAAPCTHYVQRGVCKFGPACKFDHPMGMLSYSPSASSLADMP 390
PK ++ LPLRPGA PC +Y Q G C++G ACK+DHPMG L YSPSA L+DMP
Sbjct: 337 SAPKSGYMVNSLCLPLRPGAQPCAYYAQNGYCRYGVACKYDHPMGTLGYSPSALPLSDMP 396
Query: 391 VAPYPVGSSIGTLAPSSASSDLRPELISGSSKDSVSTRMSSSVSISSGSVGSILSKSGPV 450
+APYP+G SI TLAPSS S DLRPE I S+KD +++S V+ S VGSIL K G
Sbjct: 397 IAPYPIGFSIATLAPSSPSPDLRPEYI--STKDQSVNQVTSPVAASE-PVGSILPK-GVF 452
Query: 451 PHSSMQQS 458
P +M ++
Sbjct: 453 PADTMMRA 460
Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 45/76 (59%)
Query: 38 YPERPDEADCIHYVRTGFCAYGSRCRFNHPRDRGSVMGAARAGGGEFPERVGQPVCQYYM 97
+PERP + DC +Y+RTG C +G+ C+++HPR+ + P R G C YY
Sbjct: 304 FPERPGQPDCQYYMRTGDCKFGATCKYHHPRELSAPKSGYMVNSLCLPLRPGAQPCAYYA 363
Query: 98 RTGTCKYGASCKYHHP 113
+ G C+YG +CKY HP
Sbjct: 364 QNGYCRYGVACKYDHP 379
>sp|Q5NAV3|C3H5_ORYSJ Zinc finger CCCH domain-containing protein 5 OS=Oryza sativa subsp.
japonica GN=Os01g0257400 PE=2 SV=1
Length = 466
Score = 391 bits (1005), Expect = e-108, Method: Compositional matrix adjust.
Identities = 211/428 (49%), Positives = 276/428 (64%), Gaps = 37/428 (8%)
Query: 33 VGAESYPERPDEADCIHYVRTGFCAYGSRCRFNHPRDRGSVMGAARAGGG------EFPE 86
V A PERP EADC++Y+RTG C YG CR+NHPRDR + A GGG E+PE
Sbjct: 43 VAAGRLPERPGEADCVYYLRTGACGYGENCRYNHPRDRAAA--AVLNGGGKTTHSAEYPE 100
Query: 87 RVGQPVCQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPGEKECSYYMKTR 146
R GQPVC+YYM+ GTCK+G++CKY HPR+G SV V LN GYPLR GEK+C+YY+KT
Sbjct: 101 RPGQPVCEYYMKNGTCKFGSNCKYDHPREG--SVQAVMLNSSGYPLRSGEKDCTYYVKTG 158
Query: 147 QCKFGATCKFHHPQPAGVPAPTPSPAPQVAAVPTPVPAPALYPPLQSPSVPSAQQY---- 202
CKFG+TCKFHHP+ GV P +YPP+Q + S+ Y
Sbjct: 159 HCKFGSTCKFHHPEIGGVSE-----------------TPNMYPPVQPQPISSSHPYQHLA 201
Query: 203 GVVVARPPLLHGSYVQGPYGPVLVSPSMFSLQGWSPYATSLNPISSPGTGTQSSVGSSSI 262
G + RPP+L GS++ G Y P+++ ++ +QGW+PY + +N ++S G +V +
Sbjct: 202 GWQMGRPPVLPGSFLSGSYPPMMLPSTVVPMQGWNPYISPVNQVAS--AGGHQTVQAGPF 259
Query: 263 YGIT-QLSASAPAYTGTYQSLPSSVGPSSSSQKEHPFPERPGQQECQYYMKTGDCKFGSS 321
YG++ Q ++A Y Y L SS PSSSS++E FP RPGQ ECQYY+KTG CKFGS+
Sbjct: 260 YGLSHQGPSAAVTYGSQYAPLSSSTMPSSSSKQEPAFPARPGQPECQYYLKTGSCKFGSA 319
Query: 322 CRFHHPRELIVPKMDVTLSPFGLPLRPGAAPCTHYVQRGVCKFGPACKFDHPMGMLSYSP 381
C++HHP+ L PK + LSP GLPLRPG+ PC +Y Q G CKFGP CKFDHPMG LSYSP
Sbjct: 320 CKYHHPQYLNTPKSNCMLSPLGLPLRPGSQPCAYYTQHGFCKFGPTCKFDHPMGTLSYSP 379
Query: 382 SASSLADMPVAPYPVGSSIGTLAPSSASSDLRPELISGSSKDSVSTRMSSSVSISSGSVG 441
SASS+ D+P+APYP+ ++ +AP S+SSDLRPE + S S+S + G G
Sbjct: 380 SASSITDLPIAPYPLNYAVAPVAPPSSSSDLRPEYL---LTKEFSANQSASPGTTCGPAG 436
Query: 442 SILSKSGP 449
++L P
Sbjct: 437 AMLKAYAP 444
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 27/43 (62%)
Query: 29 EGLGVGAESYPERPDEADCIHYVRTGFCAYGSRCRFNHPRDRG 71
+ + + + YP R E DC +YV+TG C +GS C+F+HP G
Sbjct: 133 QAVMLNSSGYPLRSGEKDCTYYVKTGHCKFGSTCKFHHPEIGG 175
>sp|Q2R4J4|C3H63_ORYSJ Zinc finger CCCH domain-containing protein 63 OS=Oryza sativa
subsp. japonica GN=Os11g0472000 PE=2 SV=2
Length = 444
Score = 330 bits (845), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 187/424 (44%), Positives = 244/424 (57%), Gaps = 40/424 (9%)
Query: 30 GLGVGAESYPERPDEADCIHYVRTGFCAYGSRCRFNHPRDRGSVMGAARAGGGEFPERVG 89
G + A YPER E DC +Y+RTG C +G C+FNHP DR + AAR G E+P+R+G
Sbjct: 45 GEAMEAGPYPERIGEPDCSYYMRTGLCRFGMTCKFNHPADRKMAVAAARMKG-EYPQRIG 103
Query: 90 QPVCQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPGEKECSYYMKTRQCK 149
QP CQYY++TGTCK+GA+CK+HHPR+ A + V LN GYPLRP EKEC+YY++T QCK
Sbjct: 104 QPECQYYLKTGTCKFGATCKFHHPREKAAIATRVQLNALGYPLRPNEKECAYYLRTGQCK 163
Query: 150 FGATCKFHHPQPAGVPAPTPSPAPQVAAVPTPVPAPALYPPLQSPSVPSAQQY-GVVVAR 208
FG+TCKFHHPQP+ + AV V Y P QS + PS Y G V
Sbjct: 164 FGSTCKFHHPQPSNT----------MVAVRGSV-----YSPGQSVTSPSQHTYPGAVTNW 208
Query: 209 PPLLHGSYVQGP-------YGPVLVSPSMFSLQGWSPYATSLNPISSPGTGTQSSVGSSS 261
P S++ P Y V+V P + + GW+PYA + SS Q + G +
Sbjct: 209 PLSRSASFIASPRWPGHSSYAQVIVPPGLVQVPGWNPYAAQIG--SSSSDDQQRTAGGAQ 266
Query: 262 IYGITQLSAS-APAYTGTYQSLPSSVGPSS--SSQKEHPFPERPGQQECQYYMKTGDCKF 318
Y ++ S + G + S + P + Q+E FPERP Q ECQ+YMKTGDCKF
Sbjct: 267 YYTGSRHSETPNMGDQGMFSSYQAGSVPLGLYTVQRESIFPERPDQPECQFYMKTGDCKF 326
Query: 319 GSSCRFHHPRELIVPKMDVTLSPFGLPLRPGAAPCTHYVQRGVCKFGPACKFDHPMGMLS 378
G+ C+FHHP+E I+P + LS GLPLRPG CT Y + G+CKFGP CKFDHPMG +
Sbjct: 327 GAVCKFHHPKERIIPTPNCALSSLGLPLRPGEPICTFYSRYGICKFGPNCKFDHPMGTVM 386
Query: 379 YSPSASSLADMPVAPYPVGSSIGTLAPSSASSDLRPELISGSSKDSVSTRMSSSVSISSG 438
Y + S D+ S+ LAP A S++ P+ +SG S+ S S I SG
Sbjct: 387 YGLATSPTGDV--------SARRMLAPVPAHSEVSPDNVSGRSRRITH---SDSQQIPSG 435
Query: 439 SVGS 442
G+
Sbjct: 436 ERGT 439
>sp|Q9SWF9|ZFNL_PEA Zinc finger CCCH domain-containing protein ZFN-like OS=Pisum
sativum PE=2 SV=1
Length = 417
Score = 324 bits (831), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 182/392 (46%), Positives = 236/392 (60%), Gaps = 31/392 (7%)
Query: 38 YPERPDEADCIHYVRTGFCAYGSRCRFNHPRDRGSVMGAARAGGGEFPERVGQPVCQYYM 97
YPE P E DC +Y+RTG C +G+ CRFNHP +R + AR G EFPER+GQP CQYY+
Sbjct: 27 YPEHPGEPDCSYYIRTGLCRFGATCRFNHPPNRKLAIATARMKG-EFPERLGQPECQYYL 85
Query: 98 RTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPGEKECSYYMKTRQCKFGATCKFH 157
+TGTCK+GA+C++HHP+ AG V+LN GYPLRP E E +YY++T QCKFG TCKFH
Sbjct: 86 KTGTCKFGATCRFHHPKDKAGVAGRVALNILGYPLRPNESERAYYLRTGQCKFGNTCKFH 145
Query: 158 HPQPAGVPAPTPSPAPQVAAVPTPVPAPALYPPLQSPSVPSAQQYGVVVARPPLLHGSYV 217
HPQP+ + + +YP +QSP+ P Q Y + SYV
Sbjct: 146 HPQPSNMV--------------LSMRGSTVYPTVQSPTTPGQQSYAAGITN--WSSSSYV 189
Query: 218 -----QGP--YGPVLVSPSMFSLQGWSPYATSLNPISSPGTGTQSSVGSSSIYGITQLSA 270
QGP Y P+++ + S+ GWS Y + S T +S G + +
Sbjct: 190 PSPRWQGPSSYAPLILPQGVVSVPGWSTYGGQMGSESPQQTMRNDQTYGTSHQGELENAG 249
Query: 271 SAPAYTGTYQSLPSSVGPSSSSQKEHPFPERPGQQECQYYMKTGDCKFGSSCRFHHPREL 330
AY+ Y+S VG + Q+++ FPERP Q ECQ+YMKTGDCKFG+ CRFHHPRE
Sbjct: 250 LQGAYS-QYRSGSVPVG-FYALQRDNIFPERPDQPECQFYMKTGDCKFGAVCRFHHPRER 307
Query: 331 IVPKMDVTLSPFGLPLRPGAAPCTHYVQRGVCKFGPACKFDHPMGMLSYSPSASSLADMP 390
+P D LSP GLPLRPG C Y + G+CKFGP+CKFDHPMG+ +Y+ AS LAD P
Sbjct: 308 QIPAPDCVLSPIGLPLRPGEPLCVFYSRYGICKFGPSCKFDHPMGIFTYN-VASPLADTP 366
Query: 391 VAPYPVGSSIGTLAPSSASSDLRPELISGSSK 422
+GSS GT A S +S L + SG++K
Sbjct: 367 -GRRLLGSSSGTAALSLSSEGL---VESGTAK 394
Score = 80.1 bits (196), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 5/87 (5%)
Query: 289 SSSSQKEHPFPERPGQQECQYYMKTGDCKFGSSCRFHHP--RELIVPKMDVTLSPFGLPL 346
SS + + P+PE PG+ +C YY++TG C+FG++CRF+HP R+L + + P
Sbjct: 18 SSETMESGPYPEHPGEPDCSYYIRTGLCRFGATCRFNHPPNRKLAIATARMKGE---FPE 74
Query: 347 RPGAAPCTHYVQRGVCKFGPACKFDHP 373
R G C +Y++ G CKFG C+F HP
Sbjct: 75 RLGQPECQYYLKTGTCKFGATCRFHHP 101
>sp|Q2QT65|C3H66_ORYSJ Zinc finger CCCH domain-containing protein 66 OS=Oryza sativa
subsp. japonica GN=Os12g0405100 PE=2 SV=1
Length = 454
Score = 313 bits (802), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 179/412 (43%), Positives = 230/412 (55%), Gaps = 38/412 (9%)
Query: 38 YPERPDEADCIHYVRTGFCAYGSRCRFNHPRDRGSVMGAARAGGGEFPERVGQPVCQYYM 97
YPER E DC +Y+RTG C +G C+FNHP +R + AAR G E+P RVGQP CQYY+
Sbjct: 63 YPERIGEPDCSYYMRTGLCRFGMTCKFNHPPNRKLAVAAARMNG-EYPYRVGQPECQYYL 121
Query: 98 RTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPGEKECSYYMKTRQCKFGATCKFH 157
+TGTCK+GA+CK+HHPR+ A + V LN GYP+RP EKEC+YY++T QCKF +TCKFH
Sbjct: 122 KTGTCKFGATCKFHHPREKAALANRVQLNVLGYPMRPNEKECAYYLRTGQCKFASTCKFH 181
Query: 158 HPQPAGVPAPTPSPAPQVAAVPTPVPAPALYPPLQSPSVPSAQQY-GVVVARPPLLHGSY 216
HPQP+ + AV ++Y P QS + P Y G V S+
Sbjct: 182 HPQPSNT----------MVAVRN-----SMYSPGQSATSPGQHTYPGAVTNWTLSRSASF 226
Query: 217 VQGP-------YGPVLVSPSMFSLQGWSPYATSLNPISSPGTGTQSSVGSSSIYGITQLS 269
+ P Y V+V + + GW+PYA + SSP ++ V ++ YG Q
Sbjct: 227 IASPRWPGHSGYAQVIVPQGLVQVPGWNPYAAQMGS-SSPDDQQRTPV-TTQYYGSRQSE 284
Query: 270 ASAPAYTGTYQSLPSSVGPSS--SSQKEHPFPERPGQQECQYYMKTGDCKFGSSCRFHHP 327
G YQS P + Q E+ FPERP Q ECQ+YMKTGDCKFG+ C+FHHP
Sbjct: 285 TGGMGDHGMYQSYQGGSVPVGVYTVQGENIFPERPDQPECQFYMKTGDCKFGAVCKFHHP 344
Query: 328 RELIVPKMDVTLSPFGLPLRPGAAPCTHYVQRGVCKFGPACKFDHPMGMLSYSPSASSLA 387
+E +VP + L+ GLPLRPG CT Y + G+CKFGP CKFDHPMG L Y + S
Sbjct: 345 KERLVPAPNCALNSLGLPLRPGEPVCTFYSRYGICKFGPNCKFDHPMGTLMYGSATSPRG 404
Query: 388 DMPVAPYPVGSSIGTLAPSSASSDLRPELISGSSKDSVSTRMSSSVSISSGS 439
D+ Y L+PS + L+ G S S S S I SG
Sbjct: 405 DVSSMHY-------QLSPSPGHPGI---LLDGGSGRSHRVPQSDSQQIPSGD 446
>sp|Q8GXX7|C3H33_ARATH Zinc finger CCCH domain-containing protein 33 OS=Arabidopsis
thaliana GN=ZFN1 PE=1 SV=1
Length = 397
Score = 306 bits (784), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 157/358 (43%), Positives = 210/358 (58%), Gaps = 36/358 (10%)
Query: 37 SYPERPDEADCIHYVRTGFCAYGSRCRFNHPRDRGSVMGAARAGGGEFPERVGQPVCQYY 96
SYPERP E DC +Y+RTG C +GS CRFNHPRDR V+ AR G E+PER+GQP C+YY
Sbjct: 36 SYPERPGEPDCSYYIRTGLCRFGSTCRFNHPRDRELVIATARMRG-EYPERIGQPECEYY 94
Query: 97 MRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPGEKECSYYMKTRQCKFGATCKF 156
++TGTCK+G +CK+HHPR AG VSLN GYPLR E +C+Y+++T CKFG TCKF
Sbjct: 95 LKTGTCKFGVTCKFHHPRNKAGIAGRVSLNMLGYPLRSNEVDCAYFLRTGHCKFGGTCKF 154
Query: 157 HHPQPAGVPAPTPSPAPQVAAVPTPVPAPALYPPLQSPSVPSAQQYGVVVARPPLLHGSY 216
+HPQP PT + VP++ Q +R +
Sbjct: 155 NHPQPQ----------------PTNM------------MVPTSGQQSYPWSRASFIASPR 186
Query: 217 VQGP--YGPVLVSPSMFSLQGWSPYATSLNPISSPGTGTQSSVGSSSIYGITQLSASAPA 274
Q P Y +++ + +QGW+PY+ L +S GTG + + + + +
Sbjct: 187 WQDPSSYASLIMPQGVVPVQGWNPYSGQLGSVSPSGTGNDQNYRNLQQNETIESGSQSQG 246
Query: 275 YTGTYQ---SLPSSVGPSSSSQKEHPFPERPGQQECQYYMKTGDCKFGSSCRFHHPRELI 331
Y S+P +G + +E+ FPERPGQ ECQ+YMKTGDCKFG+ C+FHHPR+
Sbjct: 247 SFSGYNPGSSVP--LGGYYALPRENVFPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQ 304
Query: 332 VPKMDVTLSPFGLPLRPGAAPCTHYVQRGVCKFGPACKFDHPMGMLSYSPSASSLADM 389
P D LS GLPLRPG C Y + G+CKFGP+CKFDHPM + +Y +AS ++
Sbjct: 305 APPPDCLLSSIGLPLRPGEPLCVFYTRYGICKFGPSCKFDHPMRVFTYDNTASETDEV 362
Score = 82.0 bits (201), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 54/87 (62%), Gaps = 5/87 (5%)
Query: 289 SSSSQKEHPFPERPGQQECQYYMKTGDCKFGSSCRFHHP--RELIVPKMDVTLSPFGLPL 346
S + + +PERPG+ +C YY++TG C+FGS+CRF+HP REL++ + P
Sbjct: 28 SDETMETGSYPERPGEPDCSYYIRTGLCRFGSTCRFNHPRDRELVIATARMRGE---YPE 84
Query: 347 RPGAAPCTHYVQRGVCKFGPACKFDHP 373
R G C +Y++ G CKFG CKF HP
Sbjct: 85 RIGQPECEYYLKTGTCKFGVTCKFHHP 111
>sp|Q5JLB5|C3H12_ORYSJ Zinc finger CCCH domain-containing protein 12 OS=Oryza sativa
subsp. japonica GN=Os01g0917400 PE=2 SV=2
Length = 439
Score = 301 bits (772), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 162/363 (44%), Positives = 216/363 (59%), Gaps = 31/363 (8%)
Query: 38 YPERPDEADCIHYVRTGFCAYGSRCRFNHPRDRGSVMGAARAGGGEFPERVGQPVCQYYM 97
YPER E DC +Y+RTG C +G CRFNHP+DR + +AR G E+PER+GQP CQYY+
Sbjct: 77 YPERSGEPDCTYYLRTGLCRFGMSCRFNHPQDRNLAIASARMKG-EYPERMGQPECQYYL 135
Query: 98 RTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPGEKECSYYMKTRQCKFGATCKFH 157
+TGTCK+G +CK+HHPR+ AG V LN GYPLRP EKEC+YY+KT QCK+G TCKFH
Sbjct: 136 KTGTCKFGPTCKFHHPREKAGIAGRVQLNTLGYPLRPSEKECAYYLKTGQCKYGNTCKFH 195
Query: 158 HPQPAGVPAPTPSPAPQVAAVPTPVPAPALYPPLQSPSVPSAQQYGVVVARPPLLHGSYV 217
HP+ A+ + +P +YP + S S + Y +A GS++
Sbjct: 196 HPE-------------LFNAMASSRGSP-IYPSVHS-SATAGPPYTGTMASWAFPRGSFI 240
Query: 218 QGP-------YGPVLVSPSMFSLQGWSPYATSLNPISSPGTGTQSSVGSSSIYGITQLSA 270
P Y P++V + + W+ Y + P+SS + QS G+ YG +Q
Sbjct: 241 PSPRWQNPSNYAPMIVPQGLVQVPSWNSYTGQMMPVSSSESRLQSP-GAQQTYGTSQQVD 299
Query: 271 SAPAYTGTYQSLPSSV--GPSSSSQKEHPFPERPGQQECQYYMKTGDCKFGSSCRFHHPR 328
++ G SS P + Q+E+ FPERP Q ECQYYMKTGDCKFG+ C+FHHPR
Sbjct: 300 ASAGNQGMLSPYRSSSYPVPQYALQRENVFPERPDQPECQYYMKTGDCKFGAVCKFHHPR 359
Query: 329 ELIVPKMDVTLSPFGLPLRPGAAPCTHYVQRGVCKFGPACKFDH-----PMGMLSYSPSA 383
+P D LSP GLPLRPG C Y + G+CKFG CKFDH PMG+ +Y ++
Sbjct: 360 VRSMPTPDCVLSPVGLPLRPGEELCKFYSRYGICKFGANCKFDHPTMAPPMGVYAYGSAS 419
Query: 384 SSL 386
+++
Sbjct: 420 TNV 422
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 297 PFPERPGQQECQYYMKTGDCKFGSSCRFHHPRELIVPKMDVTLSPFGLPLRPGAAPCTHY 356
P+PER G+ +C YY++TG C+FG SCRF+HP++ + + P R G C +Y
Sbjct: 76 PYPERSGEPDCTYYLRTGLCRFGMSCRFNHPQDRNLAIASARMKG-EYPERMGQPECQYY 134
Query: 357 VQRGVCKFGPACKFDHP 373
++ G CKFGP CKF HP
Sbjct: 135 LKTGTCKFGPTCKFHHP 151
>sp|Q8L7N8|C3H57_ARATH Zinc finger CCCH domain-containing protein 57 OS=Arabidopsis
thaliana GN=ZFN3 PE=2 SV=2
Length = 375
Score = 280 bits (716), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 156/357 (43%), Positives = 205/357 (57%), Gaps = 60/357 (16%)
Query: 29 EGLGVGAESYPERPDEADCIHYVRTGFCAYGSRCRFNHPRDRGSVMGAARAGGGEFPERV 88
+ +GV SYPER E DC +Y+RTG C +GS CRFNHP DR V+ AR G E+PER+
Sbjct: 31 DTMGVDG-SYPERHGEPDCAYYIRTGLCRFGSTCRFNHPHDRKLVIATARIKG-EYPERI 88
Query: 89 GQPVCQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPGEKECSYYMKTRQC 148
GQP C++Y++TGTCK+G +CK+HHPR AG +VS+N YPLRP E +CSY+++ QC
Sbjct: 89 GQPECEFYLKTGTCKFGVTCKFHHPRNKAGIDGSVSVNVLSYPLRPNEDDCSYFLRIGQC 148
Query: 149 KFGATCKFHHPQPAGVPAPTPSPAPQVAAVPTPVPAPALYPPLQSPSVPSAQQYGVVVAR 208
KFG TCKF+HPQ T S V+ +PV Y LQS + + +
Sbjct: 149 KFGGTCKFNHPQ-------TQSTNLMVSVRGSPV-----YSALQSLTGQPSYSWS----- 191
Query: 209 PPLLHGSYVQGPYGPVLVSPSMFSLQGWSPYATSLNPISSPGTGTQSSVGSSSIYGITQL 268
S+V P P L PS F+ +G+Q + SS +
Sbjct: 192 ----RTSFVANP--PRLQDPSGFA------------------SGSQGGLFSSGFHS---- 223
Query: 269 SASAPAYTGTYQSLPSSVGPSSSSQKEHPFPERPGQQECQYYMKTGDCKFGSSCRFHHPR 328
S P + +LP +E+ FPERPGQ ECQ+YMKTGDCKFG+ C+FHHPR
Sbjct: 224 GNSVPL---GFYALP----------RENVFPERPGQPECQFYMKTGDCKFGTVCKFHHPR 270
Query: 329 ELIVPKMDVTLSPFGLPLRPGAAPCTHYVQRGVCKFGPACKFDHPMGMLSYSPSASS 385
+ P D LS GLPLRPG C Y + G+CKFGP+CKFDHPM + +Y+ + +S
Sbjct: 271 DRQTPPPDCVLSSVGLPLRPGEPLCVFYSRYGICKFGPSCKFDHPMRVFTYNNNTAS 327
Score = 85.5 bits (210), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 80/169 (47%), Gaps = 19/169 (11%)
Query: 18 EWTAPGTETGPEG-LGVGAESYPERPDEADCIHYVRTGFCAYGSRCRFNHPRDRGSVMGA 76
++ P + G +G + V SYP RP+E DC +++R G C +G C+FNHP+ + + +
Sbjct: 109 KFHHPRNKAGIDGSVSVNVLSYPLRPNEDDCSYFLRIGQCKFGGTCKFNHPQTQSTNLMV 168
Query: 77 ARAGG---GEFPERVGQPVCQYYMRTGTCK---------YGASCKYHHPRQGAGSVSNVS 124
+ G GQP + + + + + G S ++V
Sbjct: 169 SVRGSPVYSALQSLTGQPSYSWSRTSFVANPPRLQDPSGFASGSQGGLFSSGFHSGNSVP 228
Query: 125 LNYYG------YPLRPGEKECSYYMKTRQCKFGATCKFHHPQPAGVPAP 167
L +Y +P RPG+ EC +YMKT CKFG CKFHHP+ P P
Sbjct: 229 LGFYALPRENVFPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQTPPP 277
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 61/114 (53%), Gaps = 9/114 (7%)
Query: 285 SVGPSSSSQKEHPFPERPGQQECQYYMKTGDCKFGSSCRFHHP--RELIVPKMDVTLSPF 342
++G + + +PER G+ +C YY++TG C+FGS+CRF+HP R+L++ +
Sbjct: 26 NLGSDDTMGVDGSYPERHGEPDCAYYIRTGLCRFGSTCRFNHPHDRKLVIATARIKGE-- 83
Query: 343 GLPLRPGAAPCTHYVQRGVCKFGPACKFDHPMGMLSYSPSASSLADMPVAPYPV 396
P R G C Y++ G CKFG CKF HP S S + V YP+
Sbjct: 84 -YPERIGQPECEFYLKTGTCKFGVTCKFHHPRNKAGIDGSVS----VNVLSYPL 132
>sp|Q5RJC5|C3H67_ARATH Zinc finger CCCH domain-containing protein 67 OS=Arabidopsis
thaliana GN=At5g63260 PE=2 SV=2
Length = 435
Score = 219 bits (557), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 140/360 (38%), Positives = 184/360 (51%), Gaps = 46/360 (12%)
Query: 38 YPERPDEADCIHYVRTGFCAYGSRCRFNHPRDRGSVMGAARAGGGEFPERVGQPV---CQ 94
YP RPD DC Y+RTG C YGS C+FNHP R +G R E E V P C+
Sbjct: 98 YPVRPDSEDCSFYMRTGSCKYGSSCKFNHPVRRKLQIGRERVR--ERDEDVENPKLMECK 155
Query: 95 YYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPGEKECSYYMKTRQCKFGATC 154
YY RTG CKYG SC++ H ++ S LN+ G P+RPGEKEC +YM+ CKFG+ C
Sbjct: 156 YYFRTGGCKYGESCRFSHMKEHNSPASVPELNFLGLPIRPGEKECPFYMRNGSCKFGSDC 215
Query: 155 KFHHPQPAGVPAPTPSPAPQVAAVPTPVPAPALYPPLQSPSV-PSAQQYGVVVARPPLLH 213
KF+HP P + V +P LY S P A + H
Sbjct: 216 KFNHPDPTAI-----------GGVDSP-----LYRGNNGGSFSPKAPSQASSTSWSSTRH 259
Query: 214 GSYVQGPYGPVLVSPSMFSLQGWSPYATSLNPISSPGTGTQSSVGSSSIYGITQLSASAP 273
+ G PSMF P++ + P +S G Q+S S Y + +P
Sbjct: 260 MNGT----GTAPFIPSMF------PHSRGVTPQASDWNGYQAS----SAYPPER----SP 301
Query: 274 AYTGTYQSLPSSVGPSSSSQKEH-----PFPERPGQQECQYYMKTGDCKFGSSCRFHHPR 328
+YQ S SS SQ +H FPERP Q EC YY+KTGDCKF C++HHP+
Sbjct: 302 LAPSSYQVNNSLAETSSFSQYQHQMSVEEFPERPDQPECTYYLKTGDCKFKYKCKYHHPK 361
Query: 329 ELIVPKMDVTLSPFGLPLRPGAAPCTHYVQRGVCKFGPACKFDHPMGMLSYSPSASSLAD 388
+ + + + GLPLRP + CTHY + G+CKFGPAC+FDH + ++SPS+S +
Sbjct: 362 NRLPKQAAFSFNDKGLPLRPDQSMCTHYSRYGICKFGPACRFDHSIP-PTFSPSSSQTVE 420
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 56/106 (52%), Gaps = 6/106 (5%)
Query: 300 ERPGQQECQYYMKTGDCKFGSSCRFHHPRELIVPKMDVTLSPFGLPLRPGAAPCTHYVQR 359
E P EC+YY +TG CK+G SCRF H +E P L+ GLP+RPG C Y++
Sbjct: 147 ENPKLMECKYYFRTGGCKYGESCRFSHMKEHNSPASVPELNFLGLPIRPGEKECPFYMRN 206
Query: 360 GVCKFGPACKFDHPMGMLSYSPSASSLADMPVAPYPVGSSIGTLAP 405
G CKFG CKF+HP P+A D P+ G S AP
Sbjct: 207 GSCKFGSDCKFNHP------DPTAIGGVDSPLYRGNNGGSFSPKAP 246
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 48/80 (60%)
Query: 33 VGAESYPERPDEADCIHYVRTGFCAYGSRCRFNHPRDRGSVMGAARAGGGEFPERVGQPV 92
+ E +PERPD+ +C +Y++TG C + +C+++HP++R A P R Q +
Sbjct: 326 MSVEEFPERPDQPECTYYLKTGDCKFKYKCKYHHPKNRLPKQAAFSFNDKGLPLRPDQSM 385
Query: 93 CQYYMRTGTCKYGASCKYHH 112
C +Y R G CK+G +C++ H
Sbjct: 386 CTHYSRYGICKFGPACRFDH 405
>sp|Q94AD9|C3H3_ARATH Zinc finger CCCH domain-containing protein 3 OS=Arabidopsis
thaliana GN=At1g04990 PE=2 SV=1
Length = 404
Score = 218 bits (555), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 135/353 (38%), Positives = 179/353 (50%), Gaps = 54/353 (15%)
Query: 24 TETGPEGLGVGAESYPERPDEADCIHYVRTGFCAYGSRCRFNHPRDRGSVMGAARAGGGE 83
ETG E L YP+RP E DC Y+RTG C YGS CR+NHP + + E
Sbjct: 34 NETGVEELN----PYPDRPGERDCQFYLRTGLCGYGSSCRYNHPTHLPQDVAYYKE---E 86
Query: 84 FPERVGQPVCQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPGEKECSYYM 143
PER+GQP C+Y+++TG CKYG +CKYHHP+ G+ V N G P+R GEK C YY+
Sbjct: 87 LPERIGQPDCEYFLKTGACKYGPTCKYHHPKDRNGA-QPVMFNVIGLPMRLGEKPCPYYL 145
Query: 144 KTRQCKFGATCKFHHPQPAGVPAPTPSPAPQVAAVPTPVPAPALYPPLQSPSVPSAQQYG 203
+T C+FG CKFHHPQP A + PA L + + YG
Sbjct: 146 RTGTCRFGVACKFHHPQPDN--------GHSTAYGMSSFPAADL---RYASGLTMMSTYG 194
Query: 204 VVVARPPLLHGSYVQGPYGPVLVSPSMFSL--QGWSPYATSLNPISSPGTGTQSSVGSSS 261
+ P + SYV P+LVSPS L QGW+PY + S+S
Sbjct: 195 TLPR--PQVPQSYV-----PILVSPSQGFLPPQGWAPYMAA----------------SNS 231
Query: 262 IYGITQLSASAPAYTGTYQSLPSSVGPSSSSQKEHPFPERPGQQECQYYMKTGDCKFGSS 321
+Y + + P Y+G+ S+ +V + E Q EC+++M TG CK+G
Sbjct: 232 MYNV----KNQPYYSGSSASMAMAVALNRG------LSESSDQPECRFFMNTGTCKYGDD 281
Query: 322 CRFHHPRELIVPKMDVTLSPFGLPLRPGAAPCTHYVQRGVCKFGPACKFDHPM 374
C++ HP I ++PF LP RPG C ++ G CKFGP CKFDHPM
Sbjct: 282 CKYSHPGVRISQPPPSLINPFVLPARPGQPACGNFRSYGFCKFGPNCKFDHPM 334
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 64/180 (35%), Gaps = 36/180 (20%)
Query: 15 PSPEWTAPGTETGPEGLGVGAESYPERPDEADCIHYVRTGFCAYGSRCRFNHPR-DRG-- 71
P+ ++ P G + + P R E C +Y+RTG C +G C+F+HP+ D G
Sbjct: 109 PTCKYHHPKDRNGAQPVMFNVIGLPMRLGEKPCPYYLRTGTCRFGVACKFHHPQPDNGHS 168
Query: 72 SVMGAARAGGGEFPERVGQPVCQY--------------------------------YMRT 99
+ G + + G + YM
Sbjct: 169 TAYGMSSFPAADLRYASGLTMMSTYGTLPRPQVPQSYVPILVSPSQGFLPPQGWAPYMAA 228
Query: 100 GTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPGEKECSYYMKTRQCKFGATCKFHHP 159
Y + ++ A V+LN G + EC ++M T CK+G CK+ HP
Sbjct: 229 SNSMYNVKNQPYYSGSSASMAMAVALN-RGLSESSDQPECRFFMNTGTCKYGDDCKYSHP 287
>sp|Q9STM4|C3H43_ARATH Zinc finger CCCH domain-containing protein 43 OS=Arabidopsis
thaliana GN=At3g48440 PE=1 SV=1
Length = 448
Score = 205 bits (522), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 133/355 (37%), Positives = 177/355 (49%), Gaps = 64/355 (18%)
Query: 38 YPERPDEADCIHYVRTGFCAYGSRCRFNHPRDR-------GSVMGAARAGGGEFPERVGQ 90
YP RP DC Y+RTG C +GS C+FNHP R V GG ++G
Sbjct: 107 YPVRPGAEDCSFYMRTGSCKFGSSCKFNHPLARKFQIARDNKVREKEDDGG-----KLGL 161
Query: 91 PVCQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPGEKECSYYMKTRQCKF 150
C+YY RTG CKYG +C+++H +G S LN+ G PLRPGE EC YYM+ CK+
Sbjct: 162 IDCKYYFRTGGCKYGETCRFNHTIPKSGLASAPELNFLGLPLRPGEVECPYYMRNGSCKY 221
Query: 151 GATCKFHHPQPAGVPAPTPSPA---PQVAAVPTPVPAPALYPPLQSPSVPSAQQYGVVVA 207
GA CKF+HP P + T SP+ ++ T P Q +
Sbjct: 222 GAECKFNHPDPTTI-GGTDSPSFRGNNGVSIGTFSPKATF------------QASSTSWS 268
Query: 208 RPPLLHGSYVQGPYGPVLVSPSMFSLQGWSPYATSLNPISSPGTGTQSSVGS-------- 259
P ++G+ P+ PV++S + TS NP G Q+SV S
Sbjct: 269 SPRHVNGT---SPFIPVMLSQTHG--------VTSQNP---EWNGYQASVYSSERGVFSP 314
Query: 260 SSIYGITQLSASAPAYTGTYQ-SLPSSVGPSSSSQKEHPFPERPGQQECQYYMKTGDCKF 318
S+ Y + SA Y+ +P+ FPERP Q EC YYMKTGDCKF
Sbjct: 315 STTYLMNNSSAETSMLLSQYRHQMPA-----------EEFPERPDQPECSYYMKTGDCKF 363
Query: 319 GSSCRFHHPRELIVPKM-DVTLSPFGLPLRPGAAPCTHYVQRGVCKFGPACKFDH 372
+C++HHP+ + PK+ L+ GLPLRP CT+Y + G+CKFGPAC+FDH
Sbjct: 364 KFNCKYHHPKNRL-PKLPPYALNDKGLPLRPDQNICTYYSRYGICKFGPACRFDH 417
Score = 85.5 bits (210), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 86/185 (46%), Gaps = 59/185 (31%)
Query: 290 SSSQKEHPFPERPGQQECQYYMKTGDCKFGSSCRFHHP-------------RE------- 329
S ++ E+ +P RPG ++C +YM+TG CKFGSSC+F+HP RE
Sbjct: 99 SENESENVYPVRPGAEDCSFYMRTGSCKFGSSCKFNHPLARKFQIARDNKVREKEDDGGK 158
Query: 330 --LI----------------------VPKMDVTLSP----FGLPLRPGAAPCTHYVQRGV 361
LI +PK + +P GLPLRPG C +Y++ G
Sbjct: 159 LGLIDCKYYFRTGGCKYGETCRFNHTIPKSGLASAPELNFLGLPLRPGEVECPYYMRNGS 218
Query: 362 CKFGPACKFDHPMGMLSYSPSASSLADMPVAPYPVGSSIGTLAP-----SSASSDLRPEL 416
CK+G CKF+HP P+ D P G SIGT +P +S++S P
Sbjct: 219 CKYGAECKFNHP------DPTTIGGTDSPSFRGNNGVSIGTFSPKATFQASSTSWSSPRH 272
Query: 417 ISGSS 421
++G+S
Sbjct: 273 VNGTS 277
Score = 73.2 bits (178), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 48/81 (59%)
Query: 35 AESYPERPDEADCIHYVRTGFCAYGSRCRFNHPRDRGSVMGAARAGGGEFPERVGQPVCQ 94
AE +PERPD+ +C +Y++TG C + C+++HP++R + P R Q +C
Sbjct: 340 AEEFPERPDQPECSYYMKTGDCKFKFNCKYHHPKNRLPKLPPYALNDKGLPLRPDQNICT 399
Query: 95 YYMRTGTCKYGASCKYHHPRQ 115
YY R G CK+G +C++ H Q
Sbjct: 400 YYSRYGICKFGPACRFDHSVQ 420
>sp|O48772|C3H26_ARATH Zinc finger CCCH domain-containing protein 26 OS=Arabidopsis
thaliana GN=ZFN2 PE=2 SV=1
Length = 453
Score = 204 bits (519), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 136/380 (35%), Positives = 184/380 (48%), Gaps = 74/380 (19%)
Query: 38 YPERPDEADCIHYVRTGFCAYGSRCRFNHPRDRGSVMGAARAGGGEFPERVGQPVCQYYM 97
YP+RP E DC ++RTG C YG+ CR+NHP ++ + PERVGQP C+
Sbjct: 41 YPDRPGERDCQFFLRTGQCGYGNSCRYNHPL--TNLPQGIIYYRDQLPERVGQPDCE--- 95
Query: 98 RTGTCKYGASCKYHHP--RQGAGSVSNVSLNYYGYPLRPGEKECSYYMKTRQCKFGATCK 155
TG CKYG +CKYHHP R GAG V N G P+R GEK C YYM+T C+FG CK
Sbjct: 96 -TGACKYGPTCKYHHPKDRNGAGPVL---FNVLGLPMRQGEKPCPYYMQTGLCRFGVACK 151
Query: 156 FHHPQPAGVPAPTPSP----------APQVAAVPTPVPAPALYPPLQSPSVPSAQQYGVV 205
FHHP P P+ S P + + PA Y + P VP +Q Y
Sbjct: 152 FHHPHPHSQPSNGHSAYAMSSFPSVGFPYASGMTMVSLPPATYGAIPRPQVPQSQAYM-- 209
Query: 206 VARPPLLHGSYVQGPYGPVLVSPSMFSL--QGWSPYATSLNPISSPGTGTQSSVGSSSIY 263
P +V+PS L QGW+ Y T+ NPI Y
Sbjct: 210 -----------------PYMVAPSQGLLPPQGWATYMTASNPI----------------Y 236
Query: 264 GI-TQLSASAPAYTGTYQSLPSSVGPSSSSQKEHPFPERPGQQECQYYMKTGDCKFGSSC 322
+ TQL +S+ S+ + + H F ER EC+++M TG CK+G C
Sbjct: 237 NMKTQLDSSS-----------SASVAVTVTSHHHSFSER---AECRFFMNTGTCKYGDDC 282
Query: 323 RFHHPRELIVPKMDVTLSPFGLPLRPGAAPCTHYVQRGVCKFGPACKFDHPMGMLSYSPS 382
++ HP+E ++ L+P LP RPG C ++ G CKFG CKFDH M + Y+ +
Sbjct: 283 KYSHPKERLLQSPPTLLNPIVLPARPGQPACGNFKAYGFCKFGANCKFDHSMLLNPYNNT 342
Query: 383 ASSLADMPVAPYPVGSSIGT 402
+++ +P PYP + T
Sbjct: 343 GLAMSSLPT-PYPYAPPVST 361
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 84/167 (50%), Gaps = 43/167 (25%)
Query: 293 QKEHPFPERPGQQECQYYMKTGDCKFGSSCRFHHP-----------RELIVPKMD----- 336
++ P+P+RPG+++CQ++++TG C +G+SCR++HP R+ + ++
Sbjct: 36 EQSSPYPDRPGERDCQFFLRTGQCGYGNSCRYNHPLTNLPQGIIYYRDQLPERVGQPDCE 95
Query: 337 -----------------------VTLSPFGLPLRPGAAPCTHYVQRGVCKFGPACKFD-- 371
V + GLP+R G PC +Y+Q G+C+FG ACKF
Sbjct: 96 TGACKYGPTCKYHHPKDRNGAGPVLFNVLGLPMRQGEKPCPYYMQTGLCRFGVACKFHHP 155
Query: 372 HPMGMLSYSPSASSLADMPVA--PYPVGSSIGTLAPSSASSDLRPEL 416
HP S SA +++ P PY G ++ +L P++ + RP++
Sbjct: 156 HPHSQPSNGHSAYAMSSFPSVGFPYASGMTMVSLPPATYGAIPRPQV 202
Score = 35.8 bits (81), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 15 PSPEWTAPGTETGPEGLGVGAESYPERPDEADCIHYVRTGFCAYGSRCRFNHP 67
P+ ++ P G + P R E C +Y++TG C +G C+F+HP
Sbjct: 103 PTCKYHHPKDRNGAGPVLFNVLGLPMRQGEKPCPYYMQTGLCRFGVACKFHHP 155
>sp|Q941Q3|C3H37_ARATH Zinc finger CCCH domain-containing protein 37 OS=Arabidopsis
thaliana GN=HUA1 PE=1 SV=1
Length = 524
Score = 192 bits (489), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 131/358 (36%), Positives = 183/358 (51%), Gaps = 51/358 (14%)
Query: 38 YPERPDEADCIHYVRTGFCAYGSRCRFNHP--RDRGSVMGAARAG---GGEFPERVGQPV 92
YP+R E DC HY++T C +G CRF+HP G + A E+PER G+P
Sbjct: 171 YPQRAGEKDCTHYMQTRTCKFGESCRFDHPIWVPEGGIPDWKEAPVVPNEEYPERPGEPD 230
Query: 93 CQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPGEKECSYYMKTRQCKFGA 152
C YY++T CKYG+ CK++HPR+ A +VS + + P RP E C++YMKT +CKFG
Sbjct: 231 CPYYIKTQRCKYGSKCKFNHPREEA-AVSVETQD--SLPERPSEPMCTFYMKTGKCKFGL 287
Query: 153 TCKFHHPQPAGVPAPTPSPAPQVAAVPTPVPAPALYPPLQSPSVPSAQQYGVVVARPPLL 212
+CKFHHP+ +P+ + V S P A V P L
Sbjct: 288 SCKFHHPKDIQLPSSSQDIGSSVGLT----------------SEPDATNNPHVTFTPALY 331
Query: 213 HGSY--------VQGPYGPVLVSPSMFSLQGWS-PYATSLNPISSPGTGTQSSVGSSSIY 263
H S V P+ S + ++ P T+ P ++ G S+ SS+
Sbjct: 332 HNSKGLPVRSGEVDCPFYLKTGSCKYGATCRYNHPERTAFIPQAA---GVNYSLVSSNTA 388
Query: 264 GITQLSASAPAYTGTYQSLPS-SVGPSSSSQKEHPFPERPGQQECQYYMKTGDCKFGSSC 322
+ L PA T YQ+L ++G S++ +P+RPGQ EC YYMKTG+CKFG C
Sbjct: 389 NL-NLGLVTPA-TSFYQTLTQPTLGVISAT-----YPQRPGQSECDYYMKTGECKFGERC 441
Query: 323 RFHHPRELI------VPKM-DVTLSPFGLPLRPGAAPCTHYVQRGVCKFGPACKFDHP 373
+FHHP + + P+ +V LS G P R GA C +Y++ G CK+G CKFDHP
Sbjct: 442 KFHHPADRLSAMTKQAPQQPNVKLSLAGYPRREGALNCPYYMKTGTCKYGATCKFDHP 499
Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/211 (36%), Positives = 106/211 (50%), Gaps = 42/211 (19%)
Query: 33 VGAESYPERPDEADCIHYVRTGFCAYGSRCRFNHPRDRGSVMGAARAGGGEFPERVGQPV 92
V E YPERP E DC +Y++T C YGS+C+FNHPR+ +V + PER +P+
Sbjct: 217 VPNEEYPERPGEPDCPYYIKTQRCKYGSKCKFNHPREEAAVSVETQ---DSLPERPSEPM 273
Query: 93 CQYYMRTGTCKYGASCKYHHPR--------QGAGSVSNVS------------------LN 126
C +YM+TG CK+G SCK+HHP+ Q GS ++ N
Sbjct: 274 CTFYMKTGKCKFGLSCKFHHPKDIQLPSSSQDIGSSVGLTSEPDATNNPHVTFTPALYHN 333
Query: 127 YYGYPLRPGEKECSYYMKTRQCKFGATCKFHH-------PQPAGVPAPTPSPAPQVAAVP 179
G P+R GE +C +Y+KT CK+GATC+++H PQ AGV S +
Sbjct: 334 SKGLPVRSGEVDCPFYLKTGSCKYGATCRYNHPERTAFIPQAAGVNYSLVSSNTANLNLG 393
Query: 180 TPVPAPALYPPLQSPSVPSAQQYGVVVARPP 210
PA + Y L P++ GV+ A P
Sbjct: 394 LVTPATSFYQTLTQPTL------GVISATYP 418
Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 86/192 (44%), Gaps = 41/192 (21%)
Query: 30 GLGVGAESYPERPDEADCIHYVRTGFCAYGSRCRFNHPRDRGSVMGAARAG--------- 80
L ++ P R E DC Y++TG C YG+ CR+NHP + AA
Sbjct: 329 ALYHNSKGLPVRSGEVDCPFYLKTGSCKYGATCRYNHPERTAFIPQAAGVNYSLVSSNTA 388
Query: 81 -------------------------GGEFPERVGQPVCQYYMRTGTCKYGASCKYHHPRQ 115
+P+R GQ C YYM+TG CK+G CK+HHP
Sbjct: 389 NLNLGLVTPATSFYQTLTQPTLGVISATYPQRPGQSECDYYMKTGECKFGERCKFHHPAD 448
Query: 116 GAGSVS-------NVSLNYYGYPLRPGEKECSYYMKTRQCKFGATCKFHHPQPAGVPAPT 168
+++ NV L+ GYP R G C YYMKT CK+GATCKF HP P V A T
Sbjct: 449 RLSAMTKQAPQQPNVKLSLAGYPRREGALNCPYYMKTGTCKYGATCKFDHPPPGEVMAKT 508
Query: 169 PSPAPQVAAVPT 180
S A A T
Sbjct: 509 TSEADAAGATNT 520
Score = 87.0 bits (214), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 65/114 (57%), Gaps = 14/114 (12%)
Query: 298 FPERPGQQECQYYMKTGDCKFGSSCRFHHPRELIVPKMDVTLSPFGLPLRPGAAPCTHYV 357
+PERPG+ +C YY+KT CK+GS C+F+HPRE ++ S LP RP CT Y+
Sbjct: 222 YPERPGEPDCPYYIKTQRCKYGSKCKFNHPREEAAVSVETQDS---LPERPSEPMCTFYM 278
Query: 358 QRGVCKFGPACKFDHPMGMLSYSPSASSLADMPVAPYPVGSSIGTLAPSSASSD 411
+ G CKFG +CKF HP + +P + +GSS+G + A+++
Sbjct: 279 KTGKCKFGLSCKFHHPKDI-----------QLPSSSQDIGSSVGLTSEPDATNN 321
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 73/144 (50%), Gaps = 27/144 (18%)
Query: 291 SSQKEHPFPERPGQQECQYYMKTGDCKFGSSCRFHHPRELIVP--------------KMD 336
S + + PERP + C +YMKTG CKFG SC+FHHP+++ +P + D
Sbjct: 258 SVETQDSLPERPSEPMCTFYMKTGKCKFGLSCKFHHPKDIQLPSSSQDIGSSVGLTSEPD 317
Query: 337 VTLSPF------------GLPLRPGAAPCTHYVQRGVCKFGPACKFDHPMGMLSYSPSAS 384
T +P GLP+R G C Y++ G CK+G C+++HP ++ P A+
Sbjct: 318 ATNNPHVTFTPALYHNSKGLPVRSGEVDCPFYLKTGSCKYGATCRYNHPE-RTAFIPQAA 376
Query: 385 SLADMPVAPYPVGSSIGTLAPSSA 408
+ V+ ++G + P+++
Sbjct: 377 GVNYSLVSSNTANLNLGLVTPATS 400
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 54/115 (46%), Gaps = 34/115 (29%)
Query: 298 FPERPGQQECQYYMKTGDCKFGSSCRFHHP-RELIVPK---------------------- 334
P R G+ +C +Y+KTG CK+G++CR++HP R +P+
Sbjct: 337 LPVRSGEVDCPFYLKTGSCKYGATCRYNHPERTAFIPQAAGVNYSLVSSNTANLNLGLVT 396
Query: 335 ------MDVTLSPFGL-----PLRPGAAPCTHYVQRGVCKFGPACKFDHPMGMLS 378
+T G+ P RPG + C +Y++ G CKFG CKF HP LS
Sbjct: 397 PATSFYQTLTQPTLGVISATYPQRPGQSECDYYMKTGECKFGERCKFHHPADRLS 451
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 333 PKMDVTLSPFGLPLRPGAAPCTHYVQRGVCKFGPACKFDHPMGM 376
PK++ T P R G CTHY+Q CKFG +C+FDHP+ +
Sbjct: 160 PKLESTSHLPIYPQRAGEKDCTHYMQTRTCKFGESCRFDHPIWV 203
>sp|Q5ZDJ6|C3H8_ORYSJ Zinc finger CCCH domain-containing protein 8 OS=Oryza sativa subsp.
japonica GN=Os01g0616400 PE=2 SV=2
Length = 462
Score = 171 bits (432), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 118/366 (32%), Positives = 177/366 (48%), Gaps = 49/366 (13%)
Query: 38 YPERPDEADCIHYVRTGFCAYGSRCRFNHPR---DRGSVMGAARAGGGE--FPERVGQPV 92
YP+RP E DC Y+ T C +G C+F+HP+ + G +A E +PE+ G+P
Sbjct: 102 YPQRPGEKDCAFYMMTRTCKFGGSCKFDHPQWVPEGGIPNWKEQAANVEESYPEQEGEPD 161
Query: 93 CQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYG-------YPLRPGEKECSYYMKT 145
C ++M+TG CK+G+ CK++HP++ ++++ + N P+RP E CS+Y KT
Sbjct: 162 CPFFMKTGKCKFGSKCKFNHPKEKVNALASGNTNDKHLIADSSILPVRPSEPLCSFYAKT 221
Query: 146 RQCKFGATCKFHHPQPAGVPAPTPSPAPQVAA---VPTPVPAPALYPPLQSPSVPSAQQY 202
+CKF A CKF+HP+ +P+ P V A ++ +Q+P V +AQ++
Sbjct: 222 GKCKFRAMCKFNHPKDIEIPSSQNEPESAVTVEGETDIGSAADSVSAKMQTP-VAAAQEF 280
Query: 203 GV--VVARPPLLHGSYVQGPYGPVLVSPSMFSLQGWS-PYATSLN---PISSPGTGTQSS 256
+ RP V P+ + S S ++ P LN P+ T S
Sbjct: 281 NSKGLPMRP-----GEVDCPFYMKMGSCKFGSTCRFNHPDRLVLNFPLPLGQTILPTPES 335
Query: 257 VGSSSIYGITQLSASAPAYTGTYQSLPSSVGPSSSSQKEHPFPERPGQQECQYYMKTGDC 316
+ +S Q + +P GP + +P+RPG C +YMKTG C
Sbjct: 336 MLLNSSANFMQ------GFDFHAAHMPVGPGPVT-------YPQRPGATVCDFYMKTGFC 382
Query: 317 KFGSSCRFHHPRELIVP---------KMDVTLSPFGLPLRPGAAPCTHYVQRGVCKFGPA 367
KF C+FHHP + P + V L+ GLP R A C Y++ GVCKFG
Sbjct: 383 KFADRCKFHHPIDRSAPDPSANWEPAEESVQLTLAGLPRREDAVVCAFYMKTGVCKFGMQ 442
Query: 368 CKFDHP 373
CKFDHP
Sbjct: 443 CKFDHP 448
Score = 129 bits (324), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 101/361 (27%), Positives = 146/361 (40%), Gaps = 79/361 (21%)
Query: 10 GSQSDPSPEWTAPG-TETGPEGLGVGAESYPERPDEADCIHYVRTGFCAYGSRCRFNHPR 68
GS P+W G E ESYPE+ E DC +++TG C +GS+C+FNHP+
Sbjct: 124 GSCKFDHPQWVPEGGIPNWKEQAANVEESYPEQEGEPDCPFFMKTGKCKFGSKCKFNHPK 183
Query: 69 DRGSVMGAAR-------AGGGEFPERVGQPVCQYYMRTGTCKYGASCKYHHPRQ------ 115
++ + + + A P R +P+C +Y +TG CK+ A CK++HP+
Sbjct: 184 EKVNALASGNTNDKHLIADSSILPVRPSEPLCSFYAKTGKCKFRAMCKFNHPKDIEIPSS 243
Query: 116 ------------------GAGSVSNV---------SLNYYGYPLRPGEKECSYYMKTRQC 148
A SVS N G P+RPGE +C +YMK C
Sbjct: 244 QNEPESAVTVEGETDIGSAADSVSAKMQTPVAAAQEFNSKGLPMRPGEVDCPFYMKMGSC 303
Query: 149 KFGATCKFHHPQPAGVPAPTPSPAPQVAAVPTPVPAPALYPPLQSPSVPSAQQYGVVVAR 208
KFG+TC+F+HP + P P + P P L + S Q + A
Sbjct: 304 KFGSTCRFNHPDRLVLNFPLP-----LGQTILPTPESMLL----NSSANFMQGFDFHAAH 354
Query: 209 PPLLHG--SYVQGPYGPVLVSPSMFSLQGWSPYATSLNPISSPGTGTQSSVGSSSIYGIT 266
P+ G +Y Q P V + G+ +A P
Sbjct: 355 MPVGPGPVTYPQRPGATVC---DFYMKTGFCKFADRCK-FHHP----------------- 393
Query: 267 QLSASAPAYTGTYQSLPSSVGPSSSSQKEHPFPERPGQQECQYYMKTGDCKFGSSCRFHH 326
+ SAP + ++ SV + + P R C +YMKTG CKFG C+F H
Sbjct: 394 -IDRSAPDPSANWEPAEESVQLTLAG-----LPRREDAVVCAFYMKTGVCKFGMQCKFDH 447
Query: 327 P 327
P
Sbjct: 448 P 448
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 75/172 (43%), Gaps = 44/172 (25%)
Query: 33 VGAESYPERPDEADCIHYVRTGFCAYGSRCRFNHPRDR---------------------- 70
++ P RP E DC Y++ G C +GS CRFNHP DR
Sbjct: 280 FNSKGLPMRPGEVDCPFYMKMGSCKFGSTCRFNHP-DRLVLNFPLPLGQTILPTPESMLL 338
Query: 71 --------GSVMGAARAGGG----EFPERVGQPVCQYYMRTGTCKYGASCKYHHPRQGAG 118
G AA G +P+R G VC +YM+TG CK+ CK+HHP +
Sbjct: 339 NSSANFMQGFDFHAAHMPVGPGPVTYPQRPGATVCDFYMKTGFCKFADRCKFHHPIDRSA 398
Query: 119 ---------SVSNVSLNYYGYPLRPGEKECSYYMKTRQCKFGATCKFHHPQP 161
+ +V L G P R C++YMKT CKFG CKF HP P
Sbjct: 399 PDPSANWEPAEESVQLTLAGLPRREDAVVCAFYMKTGVCKFGMQCKFDHPPP 450
Score = 79.7 bits (195), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 55/103 (53%), Gaps = 11/103 (10%)
Query: 31 LGVGAESYPERPDEADCIHYVRTGFCAYGSRCRFNHPRDRGSVMGAARAGGGE------- 83
+G G +YP+RP C Y++TGFC + RC+F+HP DR + +A E
Sbjct: 357 VGPGPVTYPQRPGATVCDFYMKTGFCKFADRCKFHHPIDRSAPDPSANWEPAEESVQLTL 416
Query: 84 --FPERVGQPVCQYYMRTGTCKYGASCKYHH--PRQGAGSVSN 122
P R VC +YM+TG CK+G CK+ H P++ VSN
Sbjct: 417 AGLPRREDAVVCAFYMKTGVCKFGMQCKFDHPPPQEAIAKVSN 459
Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 73/159 (45%), Gaps = 41/159 (25%)
Query: 261 SIYGITQLSASAPAYTGTYQSLPSSVGPSSSSQKEHP--FPERPGQQECQYYMKTGDCKF 318
++ G T + ++A + + Q+ P +++Q+ + P RPG+ +C +YMK G CKF
Sbjct: 252 TVEGETDIGSAADSVSAKMQT------PVAAAQEFNSKGLPMRPGEVDCPFYMKMGSCKF 305
Query: 319 GSSCRFHHPRELIV---------------------------------PKMDVTLSPFGLP 345
GS+CRF+HP L++ M V P P
Sbjct: 306 GSTCRFNHPDRLVLNFPLPLGQTILPTPESMLLNSSANFMQGFDFHAAHMPVGPGPVTYP 365
Query: 346 LRPGAAPCTHYVQRGVCKFGPACKFDHPMGMLSYSPSAS 384
RPGA C Y++ G CKF CKF HP+ + PSA+
Sbjct: 366 QRPGATVCDFYMKTGFCKFADRCKFHHPIDRSAPDPSAN 404
Score = 76.3 bits (186), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 74/151 (49%), Gaps = 28/151 (18%)
Query: 291 SSQKEHPFPERPGQQECQYYMKTGDCKFGSSCRFHHPRELI-------VPKMDVTLSPFG 343
++ E +PE+ G+ +C ++MKTG CKFGS C+F+HP+E + +
Sbjct: 146 AANVEESYPEQEGEPDCPFFMKTGKCKFGSKCKFNHPKEKVNALASGNTNDKHLIADSSI 205
Query: 344 LPLRPGAAPCTHYVQRGVCKFGPACKFDHPMGMLSYSPSASSLADMPVAPYPVGSSIGTL 403
LP+RP C+ Y + G CKF CKF+HP + PS+ +
Sbjct: 206 LPVRPSEPLCSFYAKTGKCKFRAMCKFNHPKDI--EIPSSQN------------------ 245
Query: 404 APSSASSDLRPELISGSSKDSVSTRMSSSVS 434
P SA + + E GS+ DSVS +M + V+
Sbjct: 246 EPESAVT-VEGETDIGSAADSVSAKMQTPVA 275
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 84/184 (45%), Gaps = 18/184 (9%)
Query: 298 FPERPGQQECQYYMKTGDCKFGSSCRFHHPR---ELIVP--KMDVTLSPFGLPLRPGAAP 352
+P+RPG+++C +YM T CKFG SC+F HP+ E +P K P + G
Sbjct: 102 YPQRPGEKDCAFYMMTRTCKFGGSCKFDHPQWVPEGGIPNWKEQAANVEESYPEQEGEPD 161
Query: 353 CTHYVQRGVCKFGPACKFDHPMGMLSYSPSASSLADMPVAPYPVGSSIGTLAPSSASSDL 412
C +++ G CKFG CKF+HP ++ S ++ +A SSI + PS
Sbjct: 162 CPFFMKTGKCKFGSKCKFNHPKEKVNALASGNTNDKHLIA----DSSILPVRPSEPLCSF 217
Query: 413 RPELISGSSKDSVSTRMSSSVSISSGSVGSILSKSGPVPHSSMQQSGQSSGPSTADDSSA 472
+ +G K + + I + S P S++ G++ S AD SA
Sbjct: 218 YAK--TGKCKFRAMCKFNHPKDIE-------IPSSQNEPESAVTVEGETDIGSAADSVSA 268
Query: 473 EART 476
+ +T
Sbjct: 269 KMQT 272
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Query: 14 DPSPEWTAPGTETGPEGLGVGAESYPERPDEADCIHYVRTGFCAYGSRCRFNHPRDRGSV 73
DPS W E E + + P R D C Y++TG C +G +C+F+HP + ++
Sbjct: 400 DPSANW-----EPAEESVQLTLAGLPRREDAVVCAFYMKTGVCKFGMQCKFDHPPPQEAI 454
Query: 74 MGAARAG 80
+ +G
Sbjct: 455 AKVSNSG 461
>sp|Q2QTY2|C3H65_ORYSJ Zinc finger CCCH domain-containing protein 65 OS=Oryza sativa
subsp. japonica GN=Os12g0278800 PE=2 SV=1
Length = 529
Score = 165 bits (417), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 111/314 (35%), Positives = 153/314 (48%), Gaps = 41/314 (13%)
Query: 74 MGAARAGGGEF-PERVGQPVCQYYMRTGTCKYGASCKYHHP--RQGAGSVSNVSLNYYGY 130
+ A+ EF E Q C+YY G CK+G +CKY H ++G V LN+ G
Sbjct: 223 LKVAKEKRKEFISEGSSQEECKYYSTPGGCKFGKACKYLHRDGKEGKTDAEKVDLNFLGL 282
Query: 131 PLRPGEKECSYYMKTRQCKFGATCKFHHPQPAGVPAPTPSPAPQVAAVP-------TPVP 183
PLRPGEKEC YYM+T CK+ CKFHHP P+ V + P + P + P
Sbjct: 283 PLRPGEKECPYYMRTGSCKYATNCKFHHPDPSNVASKDPQLEHENGDAPQQDVQGSSSQP 342
Query: 184 APALYPPLQSPSVPSAQQYGVVVARPPLLHGSYVQGPYGPVLVSPSMFSLQGWSPY-ATS 242
+++P ++ + + +A P SY G +L M+ W+ Y
Sbjct: 343 NASIWPDQRT----VNEHHVPFIAPSP----SYSAG----MLPPQGMYPPPEWNGYHQVP 390
Query: 243 LNPISSPGTGTQSSVGSSSIYGITQLSASAPAYTGTYQSLPSSVGPSSSSQKEHPFPERP 302
LNP PG Q + I AP G +Q +PS +PERP
Sbjct: 391 LNPYYPPGVPFQHFPAAP----INHPMYKAPEIPG-HQQVPSEE-----------YPERP 434
Query: 303 GQQECQYYMKTGDCKFGSSCRFHHPRELIVPKMDVTLSPFGLPLRPGAAPCTHYVQRGVC 362
GQ ECQ+++K+G CKF C++HHPR + P LSP GLP++P CT+Y + GVC
Sbjct: 435 GQPECQHFVKSGFCKFRMKCKYHHPRSPVPPAG--ALSPLGLPIKPDQPVCTYYGRYGVC 492
Query: 363 KFGPACKFDHPMGM 376
KFGPAC ++HP
Sbjct: 493 KFGPACAYNHPFNF 506
Score = 79.7 bits (195), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 51/81 (62%), Gaps = 2/81 (2%)
Query: 33 VGAESYPERPDEADCIHYVRTGFCAYGSRCRFNHPRDRGSVMGAARAGGGEFPERVGQPV 92
V +E YPERP + +C H+V++GFC + +C+++HPR GA G P + QPV
Sbjct: 425 VPSEEYPERPGQPECQHFVKSGFCKFRMKCKYHHPRSPVPPAGALSPLG--LPIKPDQPV 482
Query: 93 CQYYMRTGTCKYGASCKYHHP 113
C YY R G CK+G +C Y+HP
Sbjct: 483 CTYYGRYGVCKFGPACAYNHP 503
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 59/100 (59%), Gaps = 9/100 (9%)
Query: 64 FNHPRDRG-SVMGAARAGGGEFPERVGQPVCQYYMRTGTCKYGASCKYHHPRQ---GAGS 119
NHP + + G + E+PER GQP CQ+++++G CK+ CKYHHPR AG+
Sbjct: 409 INHPMYKAPEIPGHQQVPSEEYPERPGQPECQHFVKSGFCKFRMKCKYHHPRSPVPPAGA 468
Query: 120 VSNVSLNYYGYPLRPGEKECSYYMKTRQCKFGATCKFHHP 159
+S + L P++P + C+YY + CKFG C ++HP
Sbjct: 469 LSPLGL-----PIKPDQPVCTYYGRYGVCKFGPACAYNHP 503
Score = 58.9 bits (141), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 28 PEGLGVGAESYPERPDEA----DCIHYVRTGFCAYGSRCRFNHPRDRGSVMGAARAGGGE 83
P+ L V E E E +C +Y G C +G C++ H RD A
Sbjct: 220 PKELKVAKEKRKEFISEGSSQEECKYYSTPGGCKFGKACKYLH-RDGKEGKTDAEKVDLN 278
Query: 84 F---PERVGQPVCQYYMRTGTCKYGASCKYHHP 113
F P R G+ C YYMRTG+CKY +CK+HHP
Sbjct: 279 FLGLPLRPGEKECPYYMRTGSCKYATNCKFHHP 311
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 23/30 (76%)
Query: 298 FPERPGQQECQYYMKTGDCKFGSSCRFHHP 327
FP RPG+ +C YY+K G C+FG C+F+HP
Sbjct: 105 FPRRPGEPDCTYYVKFGSCRFGMKCKFNHP 134
Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 23/30 (76%)
Query: 130 YPLRPGEKECSYYMKTRQCKFGATCKFHHP 159
+P RPGE +C+YY+K C+FG CKF+HP
Sbjct: 105 FPRRPGEPDCTYYVKFGSCRFGMKCKFNHP 134
Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 38 YPERPDEADCIHYVRTGFCAYGSRCRFNHP 67
+P RP E DC +YV+ G C +G +C+FNHP
Sbjct: 105 FPRRPGEPDCTYYVKFGSCRFGMKCKFNHP 134
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 25/36 (69%)
Query: 84 FPERVGQPVCQYYMRTGTCKYGASCKYHHPRQGAGS 119
FP R G+P C YY++ G+C++G CK++HP + S
Sbjct: 105 FPRRPGEPDCTYYVKFGSCRFGMKCKFNHPARKKKS 140
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 21/30 (70%)
Query: 344 LPLRPGAAPCTHYVQRGVCKFGPACKFDHP 373
P RPG CT+YV+ G C+FG CKF+HP
Sbjct: 105 FPRRPGEPDCTYYVKFGSCRFGMKCKFNHP 134
Score = 42.7 bits (99), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 26/43 (60%)
Query: 25 ETGPEGLGVGAESYPERPDEADCIHYVRTGFCAYGSRCRFNHP 67
+T E + + P RP E +C +Y+RTG C Y + C+F+HP
Sbjct: 269 KTDAEKVDLNFLGLPLRPGEKECPYYMRTGSCKYATNCKFHHP 311
>sp|Q5Z5Q3|C3H43_ORYSJ Zinc finger CCCH domain-containing protein 43 OS=Oryza sativa
subsp. japonica GN=Os06g0520600 PE=2 SV=1
Length = 711
Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/147 (39%), Positives = 75/147 (51%), Gaps = 21/147 (14%)
Query: 36 ESYPERPDEADCIHYVRTGFCAYGSRCRFNHPRDRGSVMGAARAGGGEFPERVGQPVCQY 95
E +P RP E DC +YV+ G C +G C +NHP R + +FP R G+P C Y
Sbjct: 39 EQHPRRPGEPDCSYYVKFGSCKFGISCVYNHPDPRPQHGADDKKPAEQFPRRPGEPDCSY 98
Query: 96 YMRTGTCKYGASCKYHHP---------------------RQGAGSVSNVSLNYYGYPLRP 134
Y++ G+CK+G +C+++HP +G V V LN G PLRP
Sbjct: 99 YVKFGSCKFGMNCRFNHPPRMPVPPQQEYFSGNACHCHHIEGKSKVEQVKLNVLGLPLRP 158
Query: 135 GEKECSYYMKTRQCKFGATCKFHHPQP 161
G CSYYM CKFG CKF HP P
Sbjct: 159 GTGLCSYYMNRGICKFGTNCKFDHPDP 185
Score = 94.7 bits (234), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 58/97 (59%), Gaps = 21/97 (21%)
Query: 298 FPERPGQQECQYYMKTGDCKFGSSCRFHHPRELIVP--------------------KMD- 336
FP RPG+ +C YY+K G CKFG +CRF+HP + VP K++
Sbjct: 87 FPRRPGEPDCSYYVKFGSCKFGMNCRFNHPPRMPVPPQQEYFSGNACHCHHIEGKSKVEQ 146
Query: 337 VTLSPFGLPLRPGAAPCTHYVQRGVCKFGPACKFDHP 373
V L+ GLPLRPG C++Y+ RG+CKFG CKFDHP
Sbjct: 147 VKLNVLGLPLRPGTGLCSYYMNRGICKFGTNCKFDHP 183
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 54/97 (55%), Gaps = 8/97 (8%)
Query: 73 VMGAARAGGGEFPERVGQPVCQYYMRTGTCKYGASCKYHHP----RQGAGSVSNVSLNYY 128
V G + + P R G+P C YY++ G+CK+G SC Y+HP + GA
Sbjct: 30 VAGKTKKVEEQHPRRPGEPDCSYYVKFGSCKFGISCVYNHPDPRPQHGADDKKPAE---- 85
Query: 129 GYPLRPGEKECSYYMKTRQCKFGATCKFHHPQPAGVP 165
+P RPGE +CSYY+K CKFG C+F+HP VP
Sbjct: 86 QFPRRPGEPDCSYYVKFGSCKFGMNCRFNHPPRMPVP 122
Score = 72.8 bits (177), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 51/91 (56%), Gaps = 2/91 (2%)
Query: 283 PSSVGPSSSSQKEHPFPERPGQQECQYYMKTGDCKFGSSCRFHHPRELIVPKMDVTLSPF 342
P G + +++HP RPG+ +C YY+K G CKFG SC ++HP D
Sbjct: 28 PPVAGKTKKVEEQHP--RRPGEPDCSYYVKFGSCKFGISCVYNHPDPRPQHGADDKKPAE 85
Query: 343 GLPLRPGAAPCTHYVQRGVCKFGPACKFDHP 373
P RPG C++YV+ G CKFG C+F+HP
Sbjct: 86 QFPRRPGEPDCSYYVKFGSCKFGMNCRFNHP 116
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 48/104 (46%), Gaps = 21/104 (20%)
Query: 35 AESYPERPDEADCIHYVRTGFCAYGSRCRFNHP---------------------RDRGSV 73
AE +P RP E DC +YV+ G C +G CRFNHP + S
Sbjct: 84 AEQFPRRPGEPDCSYYVKFGSCKFGMNCRFNHPPRMPVPPQQEYFSGNACHCHHIEGKSK 143
Query: 74 MGAARAGGGEFPERVGQPVCQYYMRTGTCKYGASCKYHHPRQGA 117
+ + P R G +C YYM G CK+G +CK+ HP G+
Sbjct: 144 VEQVKLNVLGLPLRPGTGLCSYYMNRGICKFGTNCKFDHPDPGS 187
>sp|Q0DBW8|C3H42_ORYSJ Zinc finger CCCH domain-containing protein 42 OS=Oryza sativa
subsp. japonica GN=Os06g0519400 PE=2 SV=1
Length = 279
Score = 115 bits (288), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 81/159 (50%), Gaps = 32/159 (20%)
Query: 25 ETGPEGLGVGAESYPERPDEADCIHYVRTGFCAYGSRCRFNHPRDRGSVMGAARAGGG-- 82
ET P+ V + YP RP DC +YV G C +G RC +NHP A AGG
Sbjct: 64 ETEPKA-AVEPQEYPRRPGVPDCSYYVEFGSCKFGMRCLYNHP--------AKHAGGCDK 114
Query: 83 -EFPERVGQPVCQYYMRTGTCKYGASCKYHHP--------------------RQGAGSVS 121
E P+R G+ C +Y+R G CKYG +C+++HP +G
Sbjct: 115 LEHPQRPGEHDCLHYLRFGRCKYGMNCRFNHPPDRLPQQQVYFPWKACHCHHSEGKSEAE 174
Query: 122 NVSLNYYGYPLRPGEKECSYYMKTRQCKFGATCKFHHPQ 160
+V LN+ G PLRPG CSYYM CKFG+ CKFHHP
Sbjct: 175 HVKLNFLGLPLRPGTGLCSYYMNRGICKFGSNCKFHHPN 213
Score = 82.8 bits (203), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 52/107 (48%), Gaps = 20/107 (18%)
Query: 32 GVGAESYPERPDEADCIHYVRTGFCAYGSRCRFNHPRDR--------------------G 71
G +P+RP E DC+HY+R G C YG CRFNHP DR
Sbjct: 111 GCDKLEHPQRPGEHDCLHYLRFGRCKYGMNCRFNHPPDRLPQQQVYFPWKACHCHHSEGK 170
Query: 72 SVMGAARAGGGEFPERVGQPVCQYYMRTGTCKYGASCKYHHPRQGAG 118
S + P R G +C YYM G CK+G++CK+HHP G+G
Sbjct: 171 SEAEHVKLNFLGLPLRPGTGLCSYYMNRGICKFGSNCKFHHPNSGSG 217
Score = 82.4 bits (202), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 55/95 (57%), Gaps = 20/95 (21%)
Query: 299 PERPGQQECQYYMKTGDCKFGSSCRFHHP------RELIVP--------------KMDVT 338
P+RPG+ +C +Y++ G CK+G +CRF+HP +++ P V
Sbjct: 118 PQRPGEHDCLHYLRFGRCKYGMNCRFNHPPDRLPQQQVYFPWKACHCHHSEGKSEAEHVK 177
Query: 339 LSPFGLPLRPGAAPCTHYVQRGVCKFGPACKFDHP 373
L+ GLPLRPG C++Y+ RG+CKFG CKF HP
Sbjct: 178 LNFLGLPLRPGTGLCSYYMNRGICKFGSNCKFHHP 212
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 298 FPERPGQQECQYYMKTGDCKFGSSCRFHHPRELIVPKMDVTLSPFGLPLRPGAAPCTHYV 357
+P RPG +C YY++ G CKFG C ++HP K P RPG C HY+
Sbjct: 76 YPRRPGVPDCSYYVEFGSCKFGMRCLYNHP-----AKHAGGCDKLEHPQRPGEHDCLHYL 130
Query: 358 QRGVCKFGPACKFDHP 373
+ G CK+G C+F+HP
Sbjct: 131 RFGRCKYGMNCRFNHP 146
>sp|Q3ECU8|C3H13_ARATH Zinc finger CCCH domain-containing protein 13 OS=Arabidopsis
thaliana GN=At1g48195 PE=4 SV=1
Length = 82
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 54/78 (69%)
Query: 295 EHPFPERPGQQECQYYMKTGDCKFGSSCRFHHPRELIVPKMDVTLSPFGLPLRPGAAPCT 354
E FPERPG+ EC YY++TG+C +C++HHP+ + + TL+ GLPLRPG A C
Sbjct: 3 EEKFPERPGEPECSYYLRTGNCYLKQNCKYHHPKNITPSEPQCTLNDKGLPLRPGQAICP 62
Query: 355 HYVQRGVCKFGPACKFDH 372
HY + G+C+ GP CKFDH
Sbjct: 63 HYSRFGICRSGPTCKFDH 80
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 47/76 (61%)
Query: 83 EFPERVGQPVCQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPGEKECSYY 142
+FPER G+P C YY+RTG C +CKYHHP+ S +LN G PLRPG+ C +Y
Sbjct: 5 KFPERPGEPECSYYLRTGNCYLKQNCKYHHPKNITPSEPQCTLNDKGLPLRPGQAICPHY 64
Query: 143 MKTRQCKFGATCKFHH 158
+ C+ G TCKF H
Sbjct: 65 SRFGICRSGPTCKFDH 80
Score = 62.4 bits (150), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%)
Query: 33 VGAESYPERPDEADCIHYVRTGFCAYGSRCRFNHPRDRGSVMGAARAGGGEFPERVGQPV 92
+ E +PERP E +C +Y+RTG C C+++HP++ P R GQ +
Sbjct: 1 MSEEKFPERPGEPECSYYLRTGNCYLKQNCKYHHPKNITPSEPQCTLNDKGLPLRPGQAI 60
Query: 93 CQYYMRTGTCKYGASCKYHH 112
C +Y R G C+ G +CK+ H
Sbjct: 61 CPHYSRFGICRSGPTCKFDH 80
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 130 YPLRPGEKECSYYMKTRQCKFGATCKFHHPQ 160
+P RPGE ECSYY++T C CK+HHP+
Sbjct: 6 FPERPGEPECSYYLRTGNCYLKQNCKYHHPK 36
Score = 33.5 bits (75), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Query: 339 LSPFGLPLRPGAAPCTHYVQRGVCKFGPACKFDHPMGMLSYSPSASSLAD--MPVAP 393
+S P RPG C++Y++ G C CK+ HP + P +L D +P+ P
Sbjct: 1 MSEEKFPERPGEPECSYYLRTGNCYLKQNCKYHHPKNITPSEPQC-TLNDKGLPLRP 56
>sp|Q9C7P4|C3H9_ARATH Putative zinc finger CCCH domain-containing protein 9
OS=Arabidopsis thaliana GN=At1g29570 PE=4 SV=1
Length = 321
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 14/67 (20%)
Query: 297 PFPERPGQQECQYYMKTGDCKFGSSCRFHHPRELIVPKMDVTLSPFGLPLRPGAAPCTHY 356
P+P RPG+++CQ+Y+K G C++ SSCRF+HP T P LP+R C H
Sbjct: 51 PYPVRPGKKDCQFYLKNGLCRYRSSCRFNHP----------TQRPQELPVR----ICKHI 96
Query: 357 VQRGVCK 363
+ R V +
Sbjct: 97 MDRNVAE 103
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 29/39 (74%), Gaps = 2/39 (5%)
Query: 130 YPLRPGEKECSYYMKTRQCKFGATCKFHHP--QPAGVPA 166
YP+RPG+K+C +Y+K C++ ++C+F+HP +P +P
Sbjct: 52 YPVRPGKKDCQFYLKNGLCRYRSSCRFNHPTQRPQELPV 90
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 20/30 (66%)
Query: 38 YPERPDEADCIHYVRTGFCAYGSRCRFNHP 67
YP RP + DC Y++ G C Y S CRFNHP
Sbjct: 52 YPVRPGKKDCQFYLKNGLCRYRSSCRFNHP 81
Score = 42.7 bits (99), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 84 FPERVGQPVCQYYMRTGTCKYGASCKYHHP 113
+P R G+ CQ+Y++ G C+Y +SC+++HP
Sbjct: 52 YPVRPGKKDCQFYLKNGLCRYRSSCRFNHP 81
Score = 42.4 bits (98), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 21/29 (72%)
Query: 345 PLRPGAAPCTHYVQRGVCKFGPACKFDHP 373
P+RPG C Y++ G+C++ +C+F+HP
Sbjct: 53 PVRPGKKDCQFYLKNGLCRYRSSCRFNHP 81
>sp|Q9C7P1|C3H10_ARATH Putative zinc finger CCCH domain-containing protein 10
OS=Arabidopsis thaliana GN=At1g29600/At1g29610 PE=2 SV=2
Length = 389
Score = 52.4 bits (124), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 17/88 (19%)
Query: 33 VGAESYPERPDEADCIHYVRTGFCAYGSRCRFNHPRDRGSVMGAARAGGGEFPERVGQPV 92
V + +YP RP E +C+ Y++ C +GS C +NHP E P R+G+ +
Sbjct: 123 VLSSAYPVRPGEDNCLFYMKNHLCEWGSECCYNHP------------PLQEIPCRIGKKL 170
Query: 93 -CQYYMRTGTCKYGASCKYHHPRQGAGS 119
C + G CK G++C ++HP++ G
Sbjct: 171 DC----KAGACKRGSNCPFNHPKERDGD 194
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 17/77 (22%)
Query: 298 FPERPGQQECQYYMKTGDCKFGSSCRFHHPRELIVPKMDVTLSPFGLPLRPGAA-PCTHY 356
+P RPG+ C +YMK C++GS C ++HP P ++ P R G C
Sbjct: 128 YPVRPGEDNCLFYMKNHLCEWGSECCYNHP-----PLQEI-------PCRIGKKLDCKA- 174
Query: 357 VQRGVCKFGPACKFDHP 373
G CK G C F+HP
Sbjct: 175 ---GACKRGSNCPFNHP 188
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 129 GYPLRPGEKECSYYMKTRQCKFGATCKFHHPQPAGVP 165
YP+RPGE C +YMK C++G+ C ++HP +P
Sbjct: 127 AYPVRPGEDNCLFYMKNHLCEWGSECCYNHPPLQEIP 163
Score = 41.2 bits (95), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 18/88 (20%)
Query: 84 FPERVGQPVCQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPGEK-ECSYY 142
+P R G+ C +YM+ C++G+ C Y+HP P R G+K +C
Sbjct: 128 YPVRPGEDNCLFYMKNHLCEWGSECCYNHP------------PLQEIPCRIGKKLDC--- 172
Query: 143 MKTRQCKFGATCKFHHPQPA-GVPAPTP 169
K CK G+ C F+HP+ G P P
Sbjct: 173 -KAGACKRGSNCPFNHPKERDGDSLPMP 199
>sp|A3CEM4|C3H64_ORYSJ Putative zinc finger CCCH domain-containing protein 64 OS=Oryza
sativa subsp. japonica GN=Os12g0129500 PE=4 SV=2
Length = 527
Score = 48.9 bits (115), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 25/33 (75%)
Query: 83 EFPERVGQPVCQYYMRTGTCKYGASCKYHHPRQ 115
++PER G+P C+YYM+ G CK+ CKY+HP+
Sbjct: 209 QYPERPGEPFCRYYMKFGECKHMTFCKYNHPKD 241
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 26/32 (81%)
Query: 298 FPERPGQQECQYYMKTGDCKFGSSCRFHHPRE 329
+PERPG+ C+YYMK G+CK + C+++HP++
Sbjct: 210 YPERPGEPFCRYYMKFGECKHMTFCKYNHPKD 241
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 38 YPERPDEADCIHYVRTGFCAYGSRCRFNHPRDRGS 72
YPERP E C +Y++ G C + + C++NHP+DR S
Sbjct: 210 YPERPGEPFCRYYMKFGECKHMTFCKYNHPKDRFS 244
Score = 42.0 bits (97), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 21/31 (67%)
Query: 130 YPLRPGEKECSYYMKTRQCKFGATCKFHHPQ 160
YP RPGE C YYMK +CK CK++HP+
Sbjct: 210 YPERPGEPFCRYYMKFGECKHMTFCKYNHPK 240
Score = 33.1 bits (74), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 345 PLRPGAAPCTHYVQRGVCKFGPACKFDHPMGMLS 378
P RPG C +Y++ G CK CK++HP S
Sbjct: 211 PERPGEPFCRYYMKFGECKHMTFCKYNHPKDRFS 244
>sp|Q9QXP6|MKRN1_MOUSE E3 ubiquitin-protein ligase makorin-1 OS=Mus musculus GN=Mkrn1 PE=2
SV=1
Length = 481
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 18/87 (20%)
Query: 304 QQECQYYMKTGDCKFGSSCRFHHPRELIVPKMDVTLSPFGLPLRPGAAPCTHYVQRGVCK 363
Q C+Y+M G CK G +CR+ H D++ SP+G+ + Y QRG C
Sbjct: 58 QVTCRYFMH-GVCKEGDNCRYSH---------DLSDSPYGVVCK--------YFQRGYCV 99
Query: 364 FGPACKFDHPMGMLSYSPSASSLADMP 390
+G C+++H + +A+ L+ P
Sbjct: 100 YGDRCRYEHSKPLKQEEVTATDLSAKP 126
>sp|P61129|ZC3H6_HUMAN Zinc finger CCCH domain-containing protein 6 OS=Homo sapiens
GN=ZC3H6 PE=2 SV=2
Length = 1189
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 60/161 (37%), Gaps = 44/161 (27%)
Query: 2 ERHGRVSEG----SQSDPSPEWTAPGTETGPEGLGVGAESYPERPDEADCIHYVRTGFCA 57
ER GR ++G S SD E+ PG + + E + C +++ G C
Sbjct: 229 ERGGRTNKGPNVFSVSDDFQEYNKPGKKWKVMTQEFINQHTVEHKGKQICKYFLE-GRCI 287
Query: 58 YGSRCRFNHPRDRGSVMGAARAGGGEFPERVGQPVCQYYMRTGTCKYGASCKYHHPRQGA 117
G +C+F+H E +R + +C++Y++ G C G +C Y H
Sbjct: 288 KGDQCKFDH--------------DAELEKR--KEICKFYLQ-GYCTKGENCIYMH----- 325
Query: 118 GSVSNVSLNYYGYPLRPGEKECSYYMKTRQCKFGATCKFHH 158
E C +Y +C G CKF H
Sbjct: 326 -----------------NEFPCKFYHSGAKCYQGDNCKFSH 349
Score = 35.8 bits (81), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 31/80 (38%), Gaps = 8/80 (10%)
Query: 300 ERPGQQECQYYMKTGDCKFGSSCRFHHPRELIVPKMDVTLSPFGLPLR-------PGAAP 352
E G+Q C+Y+++ G C G C+F H EL K G + P
Sbjct: 271 EHKGKQICKYFLE-GRCIKGDQCKFDHDAELEKRKEICKFYLQGYCTKGENCIYMHNEFP 329
Query: 353 CTHYVQRGVCKFGPACKFDH 372
C Y C G CKF H
Sbjct: 330 CKFYHSGAKCYQGDNCKFSH 349
>sp|Q8JFF3|MKRN1_SERQU Probable E3 ubiquitin-protein ligase makorin-1 OS=Seriola
quinqueradiata GN=mkrn1 PE=2 SV=1
Length = 435
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 43/104 (41%), Gaps = 29/104 (27%)
Query: 92 VCQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPGEKECSYYMKTRQCKFG 151
C+Y+M G CK G +C+Y H + +P C ++ K C FG
Sbjct: 23 TCRYFMH-GLCKEGDNCRYSHDLTNS---------------KPAAMICKFFQKG-NCVFG 65
Query: 152 ATCKFHHPQPAG---VPAPTPSPAPQVAAV---------PTPVP 183
C+F H +PA +PAP P P + PTPVP
Sbjct: 66 DRCRFEHCKPAKNEELPAPQMLPLPSASLAGPSDPEPSGPTPVP 109
Score = 40.0 bits (92), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 17/66 (25%)
Query: 307 CQYYMKTGDCKFGSSCRFHHPRELIVPKMDVTLSPFGLPLRPGAAPCTHYVQRGVCKFGP 366
C+Y+M G CK G +CR+ H D+T S +P A C + Q+G C FG
Sbjct: 24 CRYFMH-GLCKEGDNCRYSH---------DLTNS------KPAAMICK-FFQKGNCVFGD 66
Query: 367 ACKFDH 372
C+F+H
Sbjct: 67 RCRFEH 72
>sp|Q9TT91|MKRN1_MACEU E3 ubiquitin-protein ligase makorin-1 OS=Macropus eugenii GN=MKRN1
PE=2 SV=1
Length = 478
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 21/92 (22%)
Query: 304 QQECQYYMKTGDCKFGSSCRFHHPRELIVPKMDVTLSPFGLPLRPGAAPCTHYVQRGVCK 363
Q C+Y+M G CK G++CR+ H D++ S + R Y QRG C
Sbjct: 54 QVTCRYFMH-GVCKKGNNCRYSH---------DLSTSQSAMVCR--------YYQRGCCA 95
Query: 364 FGPACKFDHPMGMLSYSPSASSLA---DMPVA 392
+G C+++H + +A++LA D+P +
Sbjct: 96 YGDRCRYEHTKPLKREEVTAANLAAKSDLPAS 127
Score = 42.4 bits (98), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 43/111 (38%), Gaps = 18/111 (16%)
Query: 90 QPVCQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPGEKECSYYMKTRQCK 149
Q C+Y+M G CK G +C+Y H + S C YY + C
Sbjct: 54 QVTCRYFMH-GVCKKGNNCRYSHDLSTSQSAMV----------------CRYYQRG-CCA 95
Query: 150 FGATCKFHHPQPAGVPAPTPSPAPQVAAVPTPVPAPALYPPLQSPSVPSAQ 200
+G C++ H +P T + + +P PAL PL S A+
Sbjct: 96 YGDRCRYEHTKPLKREEVTAANLAAKSDLPASSSLPALVEPLAEVSTGEAE 146
Score = 36.2 bits (82), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 17/65 (26%)
Query: 50 YVRTGFCAYGSRCRFNHPRDRGSVMGAARAGGGEFPERVGQPVCQYYMRTGTCKYGASCK 109
Y G C G+ CR++H D + A VC+YY R G C YG C+
Sbjct: 59 YFMHGVCKKGNNCRYSH--DLSTSQSAM--------------VCRYYQR-GCCAYGDRCR 101
Query: 110 YHHPR 114
Y H +
Sbjct: 102 YEHTK 106
Score = 33.9 bits (76), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Query: 47 CIHYVRTGFCAYGSRCRFNH--PRDRGSVMGAARAGGGEFP 85
C +Y R G CAYG RCR+ H P R V A A + P
Sbjct: 86 CRYYQR-GCCAYGDRCRYEHTKPLKREEVTAANLAAKSDLP 125
>sp|Q9UHC7|MKRN1_HUMAN E3 ubiquitin-protein ligase makorin-1 OS=Homo sapiens GN=MKRN1 PE=1
SV=3
Length = 482
Score = 42.0 bits (97), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 18/83 (21%)
Query: 304 QQECQYYMKTGDCKFGSSCRFHHPRELIVPKMDVTLSPFGLPLRPGAAPCTHYVQRGVCK 363
Q C+Y+M G CK G +CR+ H D++ SP+ + + Y QRG C
Sbjct: 58 QVTCRYFMH-GVCKEGDNCRYSH---------DLSDSPYSVVCK--------YFQRGYCI 99
Query: 364 FGPACKFDHPMGMLSYSPSASSL 386
+G C+++H + +A+ L
Sbjct: 100 YGDRCRYEHSKPLKQEEATATEL 122
>sp|Q4SRI6|MKRN1_TETNG Probable E3 ubiquitin-protein ligase makorin-1 OS=Tetraodon
nigroviridis GN=mkrn1 PE=3 SV=1
Length = 372
Score = 42.0 bits (97), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 17/66 (25%)
Query: 307 CQYYMKTGDCKFGSSCRFHHPRELIVPKMDVTLSPFGLPLRPGAAPCTHYVQRGVCKFGP 366
C+Y+M G CK G +CR+ H D+T S +P A C + Q+G C FG
Sbjct: 24 CRYFMH-GLCKEGDNCRYSH---------DLTNS------KPAAMICK-FFQKGNCVFGE 66
Query: 367 ACKFDH 372
C+FDH
Sbjct: 67 RCRFDH 72
Score = 35.8 bits (81), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 17/69 (24%)
Query: 93 CQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPGEKECSYYMKTRQCKFGA 152
C+Y+M G CK G +C+Y H + +P C ++ K C FG
Sbjct: 24 CRYFMH-GLCKEGDNCRYSHDLTNS---------------KPAAMICKFFQKG-NCVFGE 66
Query: 153 TCKFHHPQP 161
C+F H +P
Sbjct: 67 RCRFDHCKP 75
>sp|P0CS64|YTH1_CRYNJ mRNA 3'-end-processing protein YTH1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=YTH1 PE=3 SV=1
Length = 332
Score = 41.2 bits (95), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 44/124 (35%), Gaps = 22/124 (17%)
Query: 47 CIHYVRTGFCAYGSRCRFNHPRDRGSVMGAARAGGGEFPERVGQPVCQYYMRTGTCKYGA 106
C HY+R C G C + H +F R PVC ++++ G C+ G
Sbjct: 99 CKHYLRN-LCKMGDNCEYTH----------------DFNLRT-MPVCIWFVKQGKCELGG 140
Query: 107 SCKYHHPRQGAGSVSNVSLNYY----GYPLRPGEKECSYYMKTRQCKFGATCKFHHPQPA 162
C Y HPR + + + P + + C G CK HP P
Sbjct: 141 ECLYFHPRDRRVECPDYNRGFCVLGPNCPRKHIRRRLCDAYAAGFCPDGKDCKLAHPSPN 200
Query: 163 GVPA 166
PA
Sbjct: 201 RPPA 204
Score = 33.1 bits (74), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 30/74 (40%), Gaps = 10/74 (13%)
Query: 307 CQYYMKTGDCKFGSSCRFHHPRELIVPKMDVTLSPFGLPLRPGAAPCTHYVQR------- 359
C +++K G C+ G C + HPR+ V D G + P H +R
Sbjct: 127 CIWFVKQGKCELGGECLYFHPRDRRVECPDYNR---GFCVLGPNCPRKHIRRRLCDAYAA 183
Query: 360 GVCKFGPACKFDHP 373
G C G CK HP
Sbjct: 184 GFCPDGKDCKLAHP 197
>sp|P0CS65|YTH1_CRYNB mRNA 3'-end-processing protein YTH1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=YTH1 PE=3 SV=1
Length = 332
Score = 41.2 bits (95), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 44/124 (35%), Gaps = 22/124 (17%)
Query: 47 CIHYVRTGFCAYGSRCRFNHPRDRGSVMGAARAGGGEFPERVGQPVCQYYMRTGTCKYGA 106
C HY+R C G C + H +F R PVC ++++ G C+ G
Sbjct: 99 CKHYLRN-LCKMGDNCEYTH----------------DFNLRT-MPVCIWFVKQGKCELGG 140
Query: 107 SCKYHHPRQGAGSVSNVSLNYY----GYPLRPGEKECSYYMKTRQCKFGATCKFHHPQPA 162
C Y HPR + + + P + + C G CK HP P
Sbjct: 141 ECLYFHPRDRRVECPDYNRGFCVLGPNCPRKHIRRRLCDAYAAGFCPDGKDCKLAHPSPN 200
Query: 163 GVPA 166
PA
Sbjct: 201 RPPA 204
Score = 33.1 bits (74), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 30/74 (40%), Gaps = 10/74 (13%)
Query: 307 CQYYMKTGDCKFGSSCRFHHPRELIVPKMDVTLSPFGLPLRPGAAPCTHYVQR------- 359
C +++K G C+ G C + HPR+ V D G + P H +R
Sbjct: 127 CIWFVKQGKCELGGECLYFHPRDRRVECPDYNR---GFCVLGPNCPRKHIRRRLCDAYAA 183
Query: 360 GVCKFGPACKFDHP 373
G C G CK HP
Sbjct: 184 GFCPDGKDCKLAHP 197
>sp|Q8GW05|C3H47_ORYSJ Zinc finger CCCH domain-containing protein 47 OS=Oryza sativa
subsp. japonica GN=Os07g0138400 PE=2 SV=1
Length = 388
Score = 40.8 bits (94), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 6/61 (9%)
Query: 52 RTGFCAYGSRCRFNHPRDRGSVMGAARAGGGEFPERVGQPVCQYYMRTGTCKYGASCKYH 111
R G C G+ CR++H + ++ R GGG G+P + G C+YG +CKY
Sbjct: 331 RKGRCHNGAACRYSHGEEEQRIVPEMRVGGG------GRPCPELAAAKGWCRYGLNCKYC 384
Query: 112 H 112
H
Sbjct: 385 H 385
Score = 33.5 bits (75), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 13/69 (18%)
Query: 307 CQYYMKTGDCKFGSSCRFHHPRE--LIVPKMDVTLSPFGLPLRPGAAPCTHY-VQRGVCK 363
C + K G C G++CR+ H E IVP+M V G PC +G C+
Sbjct: 327 CSKWRK-GRCHNGAACRYSHGEEEQRIVPEMRVG---------GGGRPCPELAAAKGWCR 376
Query: 364 FGPACKFDH 372
+G CK+ H
Sbjct: 377 YGLNCKYCH 385
>sp|Q5NU14|MKRN1_TAKRU Probable E3 ubiquitin-protein ligase makorin-1 OS=Takifugu rubripes
GN=mkrn1 PE=2 SV=1
Length = 429
Score = 40.8 bits (94), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 17/66 (25%)
Query: 307 CQYYMKTGDCKFGSSCRFHHPRELIVPKMDVTLSPFGLPLRPGAAPCTHYVQRGVCKFGP 366
C+Y+M G CK G +CR+ H D+T S +P A C + Q+G C FG
Sbjct: 24 CRYFMH-GLCKEGDNCRYSH---------DLTSS------KPAAMMCK-FFQKGNCVFGE 66
Query: 367 ACKFDH 372
C+F+H
Sbjct: 67 RCRFEH 72
Score = 37.0 bits (84), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 17/90 (18%)
Query: 93 CQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPGEKECSYYMKTRQCKFGA 152
C+Y+M G CK G +C+Y H + +P C ++ K C FG
Sbjct: 24 CRYFMH-GLCKEGDNCRYSHDLTSS---------------KPAAMMCKFFQKG-NCVFGE 66
Query: 153 TCKFHHPQPAGVPAPTPSPAPQVAAVPTPV 182
C+F H +P + +++ P P+
Sbjct: 67 RCRFEHCKPTKSEEVSNPQMLLLSSTPPPI 96
>sp|Q0JP11|C3H3_ORYSJ Zinc finger CCCH domain-containing protein 3 OS=Oryza sativa subsp.
japonica GN=Os01g0252200 PE=2 SV=2
Length = 167
Score = 40.0 bits (92), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 14/21 (66%), Positives = 19/21 (90%)
Query: 92 VCQYYMRTGTCKYGASCKYHH 112
VCQ+++RTGTCK+G SC+Y H
Sbjct: 68 VCQHFVRTGTCKFGDSCRYFH 88
Score = 36.6 bits (83), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 12/20 (60%), Positives = 17/20 (85%)
Query: 307 CQYYMKTGDCKFGSSCRFHH 326
CQ++++TG CKFG SCR+ H
Sbjct: 69 CQHFVRTGTCKFGDSCRYFH 88
Score = 33.5 bits (75), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 3/32 (9%)
Query: 344 LPLRPGAAP---CTHYVQRGVCKFGPACKFDH 372
L +PGAA C H+V+ G CKFG +C++ H
Sbjct: 57 LLHQPGAAAIGVCQHFVRTGTCKFGDSCRYFH 88
Score = 32.3 bits (72), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 47 CIHYVRTGFCAYGSRCRFNH 66
C H+VRTG C +G CR+ H
Sbjct: 69 CQHFVRTGTCKFGDSCRYFH 88
>sp|Q9LTS7|C3H65_ARATH Zinc finger CCCH domain-containing protein 65 OS=Arabidopsis
thaliana GN=EMB1789 PE=2 SV=1
Length = 675
Score = 39.7 bits (91), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 52/144 (36%), Gaps = 42/144 (29%)
Query: 47 CIHYVRTGFCAYGSRCRFNHPRDRGSVMGAARAGGGEFPERVGQPVCQYYMRTGTCKYGA 106
C HY++ G C G +C+F+H PE P C Y T +C G
Sbjct: 356 CRHYLK-GRCHEGDKCKFSH---------------DTIPETKCSPCC--YFATQSCMKGD 397
Query: 107 SCKYHHPRQGAGSVSNVSLNYYGYPLRPGEKECSYYMKTRQCKFGATCKFHHPQPAGVP- 165
C + H + YP C+ ++ C G +C F H G P
Sbjct: 398 DCPFDH-------------DLSKYP-------CNNFITKGFCYRGDSCLFSH---KGTPQ 434
Query: 166 APTPSPAPQVAAVPTPVPAPALYP 189
+ + +P+ V T + A + P
Sbjct: 435 SASDTPSANVTVSSTKITAASFSP 458
Score = 37.7 bits (86), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 54/145 (37%), Gaps = 47/145 (32%)
Query: 307 CQYYMKTGDCKFGSSCRFHHPRELIVPK--------------MDVTLSPFGLPLRPGAAP 352
C++Y+K G C G C+F H +P+ M PF L P
Sbjct: 356 CRHYLK-GRCHEGDKCKFSHD---TIPETKCSPCCYFATQSCMKGDDCPFDHDL--SKYP 409
Query: 353 CTHYVQRGVCKFGPACKFDH--------------------PMGMLSYSPSAS-------S 385
C +++ +G C G +C F H + S+SP + +
Sbjct: 410 CNNFITKGFCYRGDSCLFSHKGTPQSASDTPSANVTVSSTKITAASFSPQKTKKQSVRDA 469
Query: 386 LADMPVAPYPVGSSIGTLAPSSASS 410
+A +P V SS+ L PSS S+
Sbjct: 470 IAKLPAIQARVSSSVAFLKPSSHSN 494
>sp|P53781|TTP_BOVIN Tristetraprolin OS=Bos taurus GN=ZFP36 PE=2 SV=1
Length = 324
Score = 38.1 bits (87), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 8/81 (9%)
Query: 87 RVGQPVCQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPGEKECSYYMKTR 146
R +C+ + +G C+YGA C++ H G G + S +P E +Y++ R
Sbjct: 101 RYKTELCRTFSESGRCRYGAKCQFAH---GLGELRQASR----HPKYKTELCHKFYLQGR 153
Query: 147 QCKFGATCKFHHPQPAGVPAP 167
C +G+ C F H + AP
Sbjct: 154 -CPYGSRCHFIHNPSEDLAAP 173
Score = 35.0 bits (79), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 14/91 (15%)
Query: 47 CIHYVRTGFCAYGSRCRFNHPRDRGSVMGAARAGGGEFPERVGQPVCQYYMRTGTCKYGA 106
C + +G C YG++C+F H G + A+R + +C + G C YG+
Sbjct: 107 CRTFSESGRCRYGAKCQFAH--GLGELRQASRH------PKYKTELCHKFYLQGRCPYGS 158
Query: 107 SCKY-HHPRQGAGS-----VSNVSLNYYGYP 131
C + H+P + + V S+++ G P
Sbjct: 159 RCHFIHNPSEDLAAPGHPHVLRQSISFSGLP 189
>sp|O74463|YQC1_SCHPO Uncharacterized protein C1739.01 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPCC1739.01 PE=1 SV=2
Length = 547
Score = 38.1 bits (87), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 30/74 (40%), Gaps = 19/74 (25%)
Query: 49 HYVRTGFCAYGSRCRFNHPRDRGSVMGAARAGGGEFPERVGQPVCQYYMRTGTCKYGASC 108
+ R G C G C F+H + +P+C+Y+++ G CK+G C
Sbjct: 48 KFFRNGTCTAGENCPFSHSLE------------------TERPICKYFLK-GNCKFGPKC 88
Query: 109 KYHHPRQGAGSVSN 122
H G ++ N
Sbjct: 89 ALSHALPGNTNLPN 102
Score = 37.0 bits (84), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 34/86 (39%), Gaps = 20/86 (23%)
Query: 93 CQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPGEKECSYYMKTRQCKFGA 152
C+++ R GTC G +C + H + RP C Y++K CKFG
Sbjct: 47 CKFF-RNGTCTAGENCPFSHSLETE---------------RP---ICKYFLKG-NCKFGP 86
Query: 153 TCKFHHPQPAGVPAPTPSPAPQVAAV 178
C H P P + +A++
Sbjct: 87 KCALSHALPGNTNLPNGTSTNTMASM 112
Score = 36.6 bits (83), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 25/68 (36%), Gaps = 20/68 (29%)
Query: 307 CQYYMKTGDCKFGSSCRFHHPRELIVPKMDVTLSPFGLPLRPGAAPCTHYVQRGVCKFGP 366
C+++ + G C G +C F H E P Y +G CKFGP
Sbjct: 47 CKFF-RNGTCTAGENCPFSHSLET-------------------ERPICKYFLKGNCKFGP 86
Query: 367 ACKFDHPM 374
C H +
Sbjct: 87 KCALSHAL 94
>sp|Q7SGR2|YTH1_NEUCR mRNA 3'-end-processing protein yth-1 OS=Neurospora crassa (strain
ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC
987) GN=yth-1 PE=3 SV=1
Length = 317
Score = 37.7 bits (86), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 18/91 (19%)
Query: 79 AGGGEFPERVGQPVCQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPGEKE 138
GG F G VC++++R G CK G SC++ H Y LR E
Sbjct: 85 GGGNTFSGGFGSLVCKHWLR-GLCKKGESCEFLHE----------------YNLRK-MPE 126
Query: 139 CSYYMKTRQCKFGATCKFHHPQPAGVPAPTP 169
C+++++ C G C + H P P P
Sbjct: 127 CNFFVRNGYCSNGDECLYLHIDPLSRLPPCP 157
Score = 32.3 bits (72), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 26/66 (39%), Gaps = 18/66 (27%)
Query: 47 CIHYVRTGFCAYGSRCRFNHPRDRGSVMGAARAGGGEFPERVGQPVCQYYMRTGTCKYGA 106
C H++R G C G C F H E+ R P C +++R G C G
Sbjct: 99 CKHWLR-GLCKKGESCEFLH----------------EYNLRK-MPECNFFVRNGYCSNGD 140
Query: 107 SCKYHH 112
C Y H
Sbjct: 141 ECLYLH 146
>sp|Q8IXZ2|ZC3H3_HUMAN Zinc finger CCCH domain-containing protein 3 OS=Homo sapiens
GN=ZC3H3 PE=1 SV=3
Length = 948
Score = 37.4 bits (85), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 49/122 (40%), Gaps = 30/122 (24%)
Query: 47 CIHYVRTGFCAYGSRCRFNHPRDRGS-----VMGAARAGGGEFP-----ERVGQPVCQYY 96
C++Y R G C G RC + H ++ + V G + G P + PVC Y+
Sbjct: 673 CMYYNRFGRCNRGERCPYIHDPEKVAVCTRFVRGTCKKTDGTCPFSHHVSKEKMPVCSYF 732
Query: 97 MRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPGEKECSYYMKTRQCKFGATCKF 156
++ G C ++C Y H Y R E CS ++K C GA CK
Sbjct: 733 LK-GICS-NSNCPYSH----------------VYVSRKAE-VCSDFLKG-YCPLGAKCKK 772
Query: 157 HH 158
H
Sbjct: 773 KH 774
>sp|P47973|TTP_RAT Tristetraprolin OS=Rattus norvegicus GN=Zfp36 PE=2 SV=1
Length = 320
Score = 37.0 bits (84), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 8/72 (11%)
Query: 87 RVGQPVCQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPGEKECSYYMKTR 146
R +C+ Y +G C+YGA C++ H G G + + +P E +Y++ R
Sbjct: 96 RYKTELCRTYSESGRCRYGAKCQFAH---GPGELRQANR----HPKYKTELCHKFYLQGR 148
Query: 147 QCKFGATCKFHH 158
C +G+ C F H
Sbjct: 149 -CPYGSRCHFIH 159
Score = 35.0 bits (79), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 40/96 (41%), Gaps = 24/96 (25%)
Query: 47 CIHYVRTGFCAYGSRCRFNHPRDRGSVMGAARAGGGEFPERVGQP-----VCQYYMRTGT 101
C Y +G C YG++C+F H G GE + P +C + G
Sbjct: 102 CRTYSESGRCRYGAKCQFAH-------------GPGELRQANRHPKYKTELCHKFYLQGR 148
Query: 102 CKYGASCKY-HHPRQ-----GAGSVSNVSLNYYGYP 131
C YG+ C + H+P + G V S+++ G P
Sbjct: 149 CPYGSRCHFIHNPTEDLALPGQPHVLRQSISFSGLP 184
Score = 34.3 bits (77), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 18/73 (24%)
Query: 305 QECQYYMKTGDCKFGSSCRFHH-PRELIV----PKMDVTLSPFGLPLRPGAAPCTHYVQR 359
+ C+ Y ++G C++G+ C+F H P EL PK L C + +
Sbjct: 100 ELCRTYSESGRCRYGAKCQFAHGPGELRQANRHPKYKTEL-------------CHKFYLQ 146
Query: 360 GVCKFGPACKFDH 372
G C +G C F H
Sbjct: 147 GRCPYGSRCHFIH 159
>sp|P26651|TTP_HUMAN Tristetraprolin OS=Homo sapiens GN=ZFP36 PE=1 SV=1
Length = 326
Score = 37.0 bits (84), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 8/67 (11%)
Query: 92 VCQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPGEKECSYYMKTRQCKFG 151
+C+ + +G C+YGA C++ H G G + + +P E +Y++ R C +G
Sbjct: 108 LCRTFSESGRCRYGAKCQFAH---GLGELRQANR----HPKYKTELCHKFYLQGR-CPYG 159
Query: 152 ATCKFHH 158
+ C F H
Sbjct: 160 SRCHFIH 166
Score = 34.7 bits (78), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 40/91 (43%), Gaps = 14/91 (15%)
Query: 47 CIHYVRTGFCAYGSRCRFNHPRDRGSVMGAARAGGGEFPERVGQPVCQYYMRTGTCKYGA 106
C + +G C YG++C+F H G + A R + +C + G C YG+
Sbjct: 109 CRTFSESGRCRYGAKCQFAH--GLGELRQANRH------PKYKTELCHKFYLQGRCPYGS 160
Query: 107 SCKY-HHPRQGAGS-----VSNVSLNYYGYP 131
C + H+P + + V S+++ G P
Sbjct: 161 RCHFIHNPSEDLAAPGHPPVLRQSISFSGLP 191
>sp|Q6S9E0|TTP_SHEEP Tristetraprolin OS=Ovis aries GN=ZFP36 PE=2 SV=1
Length = 325
Score = 36.6 bits (83), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 8/81 (9%)
Query: 87 RVGQPVCQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPGEKECSYYMKTR 146
R +C+ + +G C+YGA C++ H G G + S +P E +Y++ R
Sbjct: 101 RYKTELCRTFSESGRCRYGAKCQFAH---GLGELRQPSR----HPKYKTELCHKFYLQGR 153
Query: 147 QCKFGATCKFHHPQPAGVPAP 167
C +G+ C F H + AP
Sbjct: 154 -CPYGSRCHFIHNPSEDLAAP 173
Score = 34.3 bits (77), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 40/96 (41%), Gaps = 24/96 (25%)
Query: 47 CIHYVRTGFCAYGSRCRFNHPRDRGSVMGAARAGGGEFPERVGQP-----VCQYYMRTGT 101
C + +G C YG++C+F H G GE + P +C + G
Sbjct: 107 CRTFSESGRCRYGAKCQFAH-------------GLGELRQPSRHPKYKTELCHKFYLQGR 153
Query: 102 CKYGASCKY-HHPRQGAGS-----VSNVSLNYYGYP 131
C YG+ C + H+P + + V S+++ G P
Sbjct: 154 CPYGSRCHFIHNPSEDLAAPGHPHVLRQSISFSGLP 189
>sp|B0F0H3|MKRN2_XENLA Probable E3 ubiquitin-protein ligase makorin-2 OS=Xenopus laevis
GN=mkrn2 PE=2 SV=2
Length = 409
Score = 36.2 bits (82), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 18/79 (22%)
Query: 42 PDEADCIHYVRTGFCAYGSRCRFNHPRDRGSVMGAARAGGGEFPERVGQPVCQYYMRTGT 101
P + C +++ G C GSRC F+H + VC++++R G
Sbjct: 3 PKQVTCRYFLH-GVCREGSRCLFSH----------------DLATSKPSTVCRFFLR-GQ 44
Query: 102 CKYGASCKYHHPRQGAGSV 120
C YG C+Y H + G+V
Sbjct: 45 CAYGTRCRYDHVKPCNGTV 63
Score = 35.0 bits (79), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 47/108 (43%), Gaps = 30/108 (27%)
Query: 90 QPVCQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPGEKECSYYMKTRQCK 149
Q C+Y++ G C+ G+ C + H S V C ++++ QC
Sbjct: 5 QVTCRYFLH-GVCREGSRCLFSHDL-ATSKPSTV---------------CRFFLRG-QCA 46
Query: 150 FGATCKFHHPQPAG----VP----APTPSPAP----QVAAVPTPVPAP 185
+G C++ H +P +P +P SP P Q AAVP +PAP
Sbjct: 47 YGTRCRYDHVKPCNGTVFIPPQEMSPVLSPPPLFPAQEAAVPPTIPAP 94
>sp|Q69XQ3|C3H44_ORYSJ Zinc finger CCCH domain-containing protein 44 OS=Oryza sativa
subsp. japonica GN=Os06g0618100 PE=2 SV=1
Length = 295
Score = 35.8 bits (81), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 91/268 (33%), Gaps = 56/268 (20%)
Query: 93 CQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYG----------YPLRPG------- 135
C + T C +G+SC + H G G + + +G PL PG
Sbjct: 38 CTKFFSTSGCPFGSSCHFLHNFPG-GYQAAAKMTSHGGTAVAAPPGRMPLGPGAPNGPPT 96
Query: 136 ----EKECSYYMKTRQCKFGATCKFHHPQ-----PAGVPAPTPSPAPQVAAVPTPVPAPA 186
+ C+ Y CK+G+ C F H + P + P P + P+P P
Sbjct: 97 SSVKTRMCNKYNTAEGCKWGSKCHFAHGERELGKPMLLDNSMPHPMGSMPFEAPPMPGPD 156
Query: 187 LYPPLQSPSVPSAQQYGVVVARPPLLHGSYVQGPYGPVLVSPSMFSLQGWSPYAT----- 241
+ PP +G + S G G + S + A
Sbjct: 157 IVPP---------STFGASATAKISVDASLAGGIIGKGGTNTKHISRMTGAKLAIRDNES 207
Query: 242 --SLNPISSPGTGTQSSVGSSSIYG-ITQLSASAPAYTGTYQSLPSSVGPSSSSQKEHPF 298
+L I GT Q S+ + I ++S +AP + + GP S+ +
Sbjct: 208 NPNLKNIELEGTFDQIKHASAMVTELIVRISGNAPPAKNPGRG-SHAGGPGSNFK----- 261
Query: 299 PERPGQQECQYYMKTGDCKFGSSCRFHH 326
+ C+ + K G C FG C F H
Sbjct: 262 -----TKLCENFNK-GSCTFGDRCHFAH 283
Score = 32.7 bits (73), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 60/162 (37%), Gaps = 33/162 (20%)
Query: 307 CQYYMKTGDCKFGSSCRFHHP---RELIVPKMD------VTLSPFGLPLRPGA------- 350
C + T C FGSSC F H KM V P +PL PGA
Sbjct: 38 CTKFFSTSGCPFGSSCHFLHNFPGGYQAAAKMTSHGGTAVAAPPGRMPLGPGAPNGPPTS 97
Query: 351 ----APCTHYVQRGVCKFGPACKFDHPMGMLSYSPSASSLADMPVAPYPVGSSIGTLAPS 406
C Y CK+G C F H L L D + P+P+G S+ AP
Sbjct: 98 SVKTRMCNKYNTAEGCKWGSKCHFAHGERELGK----PMLLDNSM-PHPMG-SMPFEAPP 151
Query: 407 SASSDLRPELISGSSKDSVSTRMSSSVSISSGSVGSILSKSG 448
D+ P G+S ++ +S+ + G I+ K G
Sbjct: 152 MPGPDIVPPSTFGAS-------ATAKISVDASLAGGIIGKGG 186
>sp|Q6C922|YTH1_YARLI mRNA 3'-end-processing protein YTH1 OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=YTH1 PE=3 SV=1
Length = 193
Score = 35.8 bits (81), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 46/127 (36%), Gaps = 30/127 (23%)
Query: 47 CIHYVRTGFCAYGSRCRFNHPRDRGSVMGAARAGGGEFPERVGQPVCQYYMRTGTCKYGA 106
C H++R G C G C F H + + P CQ+Y++ G C
Sbjct: 60 CKHWLR-GLCKKGLNCEFLHEYNLQKM-----------------PECQFYVKNGFCTQSP 101
Query: 107 SCKYHHPRQGAGSVSNVSLNYYGYPLRPG---------EKECSYYMKTRQCKFGATCKFH 157
C+Y H S V NY + G C YM T C G C+F
Sbjct: 102 DCQYLHI--DPASKIPVCFNYEKGFCKMGPECSRKHIRRMPCELYM-TGFCPKGRVCEFA 158
Query: 158 HPQPAGV 164
HP+ G+
Sbjct: 159 HPKFVGI 165
>sp|Q4IPA4|YTH1_GIBZE mRNA 3'-end-processing protein YTH1 OS=Gibberella zeae (strain PH-1
/ ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=YTH1 PE=3
SV=2
Length = 255
Score = 35.8 bits (81), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 53/128 (41%), Gaps = 28/128 (21%)
Query: 42 PDEADCIHYVRTGFCAYGSRCRFNHPRDRGSVMGAARAGGGEFPERVGQPVCQYYMRTGT 101
PD C + ++G C G+RC H D + ++ GG + VC++++R G
Sbjct: 38 PDRPVCKAF-QSGHCPNGTRCPERHVSDSKT----SQPTGG-----LNSLVCKHWLR-GL 86
Query: 102 CKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPGEKECSYYMKTRQCKFGATCKFHHPQP 161
CK G C++ H Y LR EC+++M+ C G C + H P
Sbjct: 87 CKKGEHCEFLHE----------------YNLR-KMPECNFFMRNGYCSNGDECLYLHIDP 129
Query: 162 AGVPAPTP 169
P P
Sbjct: 130 QSRLPPCP 137
>sp|Q0DA50|C3H45_ORYSJ Zinc finger CCCH domain-containing protein 45 OS=Oryza sativa
subsp. japonica GN=Os06g0677700 PE=2 SV=1
Length = 665
Score = 35.4 bits (80), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 41/112 (36%), Gaps = 39/112 (34%)
Query: 47 CIHYVRTGFCAYGSRCRFNHPRDRGSVMGAARAGGGEFPERVGQPVCQYYMRTGTCKYGA 106
C H++R G C G C F H D+ + PVC+++ G C+
Sbjct: 64 CRHWLR-GLCMKGEACGFLHQFDKARM-----------------PVCRFFRDFGECRE-P 104
Query: 107 SCKYHHPRQGAGSVSNVSLNYYGYPLRPGEKECSYYMKTRQCKFGATCKFHH 158
C Y H S +V KEC+ Y K C G C++ H
Sbjct: 105 DCAYKH------SYDDV-------------KECNMY-KMGFCPNGPNCRYKH 136
>sp|Q9H000|MKRN2_HUMAN Probable E3 ubiquitin-protein ligase makorin-2 OS=Homo sapiens
GN=MKRN2 PE=2 SV=2
Length = 416
Score = 35.4 bits (80), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 93/262 (35%), Gaps = 71/262 (27%)
Query: 90 QPVCQYYMRTGTCKYGASCKYHHPRQGAGSVSNVSLNYYGYPLRPGEKECSYYMKTRQCK 149
Q C+Y+M G C+ G+ C + H + +P C YY K C
Sbjct: 5 QITCRYFMH-GVCREGSQCLFSHDLANS---------------KPSTI-CKYYQKG-YCA 46
Query: 150 FGATCKFHHPQPAGVPAPTPSPAPQVAAVPTPVPAPALYPPLQSPSVPSAQQYGVVVARP 209
+G C++ H +P+ V + VP+PA + SP PS +V
Sbjct: 47 YGTRCRYDHTRPSAAAGGA------VGTMAHSVPSPAFH----SPHPPSEVTASIVKT-- 94
Query: 210 PLLHGSYVQGPYGPVLVSPSMFSLQGWSPYATSLNPISSPGTGTQSSVGSSSIYGITQLS 269
S+ G + +L G + T + +S+PG S
Sbjct: 95 ----NSHEPGKREKRTLVLRDRNLSGMAERKTQPSMVSNPG------------------S 132
Query: 270 ASAP---------AYTGTYQSLPSSVGPSSSSQKEHPFPERPGQQECQYYMKTGDCKFGS 320
S P +Y +S V SSS E QQ C Y G+C+FG
Sbjct: 133 CSDPQPSPEMKPHSYLDAIRSGLDDVEASSSYSNE--------QQLCPY-AAAGECRFGD 183
Query: 321 SCRFHHPRELIVPKMDVTLSPF 342
+C + H + ++ V L PF
Sbjct: 184 ACVYLHGEVCEICRLQV-LHPF 204
Score = 34.7 bits (78), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 50 YVRTGFCAYGSRCRFNHPRDRGSVMGAA 77
Y + G+CAYG+RCR++H R + GA
Sbjct: 39 YYQKGYCAYGTRCRYDHTRPSAAAGGAV 66
Score = 33.9 bits (76), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 28/70 (40%), Gaps = 17/70 (24%)
Query: 50 YVRTGFCAYGSRCRFNHPRDRGSVMGAARAGGGEFPERVGQPVCQYYMRTGTCKYGASCK 109
Y G C GS+C F+H + +C+YY + G C YG C+
Sbjct: 10 YFMHGVCREGSQCLFSH----------------DLANSKPSTICKYYQK-GYCAYGTRCR 52
Query: 110 YHHPRQGAGS 119
Y H R A +
Sbjct: 53 YDHTRPSAAA 62
Score = 33.1 bits (74), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 35/103 (33%)
Query: 304 QQECQYYMKTGDCKFGSSCRFHHPRELIVPKMDVTLSPFGLPLRPGAAPCTHYVQRGVCK 363
Q C+Y+M G C+ GS C F H D+ S +P C +Y Q+G C
Sbjct: 5 QITCRYFMH-GVCREGSQCLFSH---------DLANS------KPSTI-CKYY-QKGYCA 46
Query: 364 FGPACKFDHPMGMLSYSPSASSLADMPVAPYPVGSSIGTLAPS 406
+G C++DH PSA++ G ++GT+A S
Sbjct: 47 YGTRCRYDHT------RPSAAA-----------GGAVGTMAHS 72
>sp|P22893|TTP_MOUSE Tristetraprolin OS=Mus musculus GN=Zfp36 PE=1 SV=1
Length = 319
Score = 35.4 bits (80), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 40/96 (41%), Gaps = 24/96 (25%)
Query: 47 CIHYVRTGFCAYGSRCRFNHPRDRGSVMGAARAGGGEFPERVGQP-----VCQYYMRTGT 101
C Y +G C YG++C+F H G GE + P +C + G
Sbjct: 101 CRTYSESGRCRYGAKCQFAH-------------GLGELRQANRHPKYKTELCHKFYLQGR 147
Query: 102 CKYGASCKY-HHPRQ-----GAGSVSNVSLNYYGYP 131
C YG+ C + H+P + G V S+++ G P
Sbjct: 148 CPYGSRCHFIHNPTEDLALPGQPHVLRQSISFSGLP 183
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.130 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 200,610,465
Number of Sequences: 539616
Number of extensions: 9772175
Number of successful extensions: 58253
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 384
Number of HSP's successfully gapped in prelim test: 1046
Number of HSP's that attempted gapping in prelim test: 41012
Number of HSP's gapped (non-prelim): 12283
length of query: 476
length of database: 191,569,459
effective HSP length: 121
effective length of query: 355
effective length of database: 126,275,923
effective search space: 44827952665
effective search space used: 44827952665
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)