Query 011855
Match_columns 476
No_of_seqs 232 out of 1156
Neff 5.1
Searched_HMMs 46136
Date Fri Mar 29 05:58:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011855.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011855hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1605 TFIIF-interacting CTD 100.0 1E-47 2.2E-52 379.7 14.1 180 295-474 81-262 (262)
2 TIGR02251 HIF-SF_euk Dullard-l 100.0 4.7E-40 1E-44 303.6 17.8 161 303-463 1-162 (162)
3 PF03031 NIF: NLI interacting 100.0 3.6E-38 7.8E-43 286.3 16.2 158 304-465 1-159 (159)
4 TIGR02245 HAD_IIID1 HAD-superf 100.0 4.9E-36 1.1E-40 286.0 15.1 159 300-474 18-194 (195)
5 TIGR02250 FCP1_euk FCP1-like p 100.0 7.4E-31 1.6E-35 242.0 13.4 138 300-440 3-154 (156)
6 KOG2832 TFIIF-interacting CTD 100.0 5.3E-31 1.1E-35 267.5 11.5 161 297-474 183-345 (393)
7 COG5190 FCP1 TFIIF-interacting 99.9 3E-28 6.4E-33 252.2 8.9 175 297-472 206-382 (390)
8 smart00577 CPDc catalytic doma 99.9 3.7E-26 8.1E-31 207.3 15.3 145 302-446 1-148 (148)
9 KOG0323 TFIIF-interacting CTD 99.8 1.6E-18 3.5E-23 188.7 11.0 137 301-440 144-297 (635)
10 TIGR01685 MDP-1 magnesium-depe 98.6 1.5E-07 3.2E-12 89.1 7.8 137 304-441 3-158 (174)
11 TIGR01681 HAD-SF-IIIC HAD-supe 98.5 9.2E-08 2E-12 85.2 3.3 111 304-426 1-121 (128)
12 COG4996 Predicted phosphatase 98.4 7.5E-07 1.6E-11 81.1 8.1 140 305-450 2-156 (164)
13 COG5190 FCP1 TFIIF-interacting 98.3 4.1E-07 8.9E-12 95.5 3.4 136 300-438 23-172 (390)
14 PRK13288 pyrophosphatase PpaX; 98.2 2.1E-07 4.6E-12 88.2 -0.4 96 342-438 81-180 (214)
15 cd01427 HAD_like Haloacid deha 98.2 8.2E-07 1.8E-11 75.0 3.0 107 305-427 1-127 (139)
16 TIGR01662 HAD-SF-IIIA HAD-supe 98.2 1.6E-06 3.5E-11 76.2 4.4 114 304-435 1-126 (132)
17 PRK14988 GMP/IMP nucleotidase; 98.2 1.4E-06 3E-11 84.4 3.6 93 342-435 92-188 (224)
18 PRK13225 phosphoglycolate phos 98.1 9.1E-07 2E-11 88.7 1.2 95 342-437 141-236 (273)
19 TIGR01684 viral_ppase viral ph 98.1 1.1E-05 2.5E-10 82.1 8.0 123 300-445 123-281 (301)
20 PHA03398 viral phosphatase sup 98.0 2E-05 4.3E-10 80.5 9.5 123 300-445 125-283 (303)
21 TIGR00338 serB phosphoserine p 98.0 1.5E-06 3.3E-11 82.3 1.0 94 342-436 84-191 (219)
22 PF12689 Acid_PPase: Acid Phos 98.0 1.4E-05 3E-10 75.5 7.3 118 303-426 3-137 (169)
23 TIGR00213 GmhB_yaeD D,D-heptos 97.9 1.3E-05 2.9E-10 74.5 5.0 115 304-436 2-146 (176)
24 TIGR01656 Histidinol-ppas hist 97.9 1.4E-05 3.1E-10 72.3 4.9 117 304-436 1-141 (147)
25 TIGR01686 FkbH FkbH-like domai 97.9 1.8E-05 4E-10 80.7 6.0 108 303-426 3-116 (320)
26 COG0637 Predicted phosphatase/ 97.9 2.6E-06 5.7E-11 82.6 -0.2 99 342-441 85-187 (221)
27 PHA02597 30.2 hypothetical pro 97.8 2.6E-06 5.6E-11 79.8 -0.9 96 342-439 73-173 (197)
28 TIGR01261 hisB_Nterm histidino 97.8 2.2E-05 4.7E-10 73.1 5.0 123 304-441 2-148 (161)
29 PRK08942 D,D-heptose 1,7-bisph 97.8 2.8E-05 6E-10 72.4 5.4 116 303-435 3-142 (181)
30 PHA02530 pseT polynucleotide k 97.8 1.7E-05 3.6E-10 79.1 3.6 128 301-439 156-295 (300)
31 PLN02940 riboflavin kinase 97.7 4.5E-06 9.9E-11 87.5 -1.9 96 342-438 92-192 (382)
32 TIGR01672 AphA HAD superfamily 97.6 6.1E-05 1.3E-09 74.6 4.5 133 300-437 60-208 (237)
33 PF13419 HAD_2: Haloacid dehal 97.5 7.6E-05 1.6E-09 66.2 3.5 94 341-435 75-172 (176)
34 TIGR01664 DNA-3'-Pase DNA 3'-p 97.5 0.00018 4E-09 67.1 6.2 107 303-423 13-137 (166)
35 TIGR01489 DKMTPPase-SF 2,3-dik 97.4 0.00015 3.2E-09 66.4 4.6 87 342-429 71-178 (188)
36 TIGR01509 HAD-SF-IA-v3 haloaci 97.4 0.00015 3.3E-09 65.9 3.7 92 342-435 84-179 (183)
37 TIGR01668 YqeG_hyp_ppase HAD s 97.4 0.00027 5.9E-09 65.8 5.3 109 301-438 23-134 (170)
38 PRK13582 thrH phosphoserine ph 97.3 5.1E-05 1.1E-09 71.1 0.2 94 342-436 67-167 (205)
39 PRK06769 hypothetical protein; 97.3 0.00017 3.8E-09 67.3 3.6 116 304-437 5-134 (173)
40 PRK05446 imidazole glycerol-ph 97.3 0.00047 1E-08 72.2 6.6 121 302-437 1-145 (354)
41 KOG3109 Haloacid dehalogenase- 97.3 0.00014 3.1E-09 71.4 2.6 88 342-431 99-196 (244)
42 PLN03243 haloacid dehalogenase 97.3 0.00027 5.8E-09 70.5 4.5 98 342-440 108-209 (260)
43 PRK11009 aphA acid phosphatase 97.3 0.00077 1.7E-08 66.9 7.6 131 300-436 60-207 (237)
44 TIGR02253 CTE7 HAD superfamily 97.3 0.00023 4.9E-09 67.4 3.7 95 341-436 92-191 (221)
45 PLN02770 haloacid dehalogenase 97.2 0.00035 7.5E-09 68.6 5.0 97 342-439 107-207 (248)
46 PF05152 DUF705: Protein of un 97.2 0.001 2.2E-08 67.7 8.2 72 301-394 120-193 (297)
47 TIGR01993 Pyr-5-nucltdase pyri 97.2 0.00017 3.8E-09 66.7 2.4 92 342-436 83-181 (184)
48 COG0546 Gph Predicted phosphat 97.2 0.00025 5.5E-09 68.3 3.6 95 342-437 88-186 (220)
49 TIGR01454 AHBA_synth_RP 3-amin 97.2 0.0003 6.5E-09 66.3 3.7 97 341-438 73-173 (205)
50 TIGR01449 PGP_bact 2-phosphogl 97.1 0.00039 8.5E-09 65.2 4.0 97 342-439 84-184 (213)
51 TIGR01428 HAD_type_II 2-haloal 97.1 0.00031 6.7E-09 65.7 2.9 94 342-436 91-188 (198)
52 TIGR02254 YjjG/YfnB HAD superf 97.1 0.00042 9.1E-09 65.3 3.7 94 342-436 96-194 (224)
53 TIGR02137 HSK-PSP phosphoserin 97.1 0.00031 6.7E-09 67.7 2.8 49 342-391 67-115 (203)
54 PLN02954 phosphoserine phospha 97.1 0.00024 5.3E-09 67.5 1.8 92 342-435 83-191 (224)
55 TIGR01670 YrbI-phosphatas 3-de 97.0 0.00072 1.6E-08 62.0 4.5 112 304-435 2-114 (154)
56 PRK10826 2-deoxyglucose-6-phos 97.0 0.00076 1.6E-08 64.4 4.2 100 342-442 91-194 (222)
57 TIGR01689 EcbF-BcbF capsule bi 96.9 0.0022 4.9E-08 57.9 6.8 73 304-393 2-87 (126)
58 PRK09449 dUMP phosphatase; Pro 96.9 0.00079 1.7E-08 64.0 3.7 93 342-435 94-191 (224)
59 PRK09456 ?-D-glucose-1-phospha 96.9 0.00078 1.7E-08 63.5 3.7 100 342-441 83-186 (199)
60 TIGR02009 PGMB-YQAB-SF beta-ph 96.9 0.00049 1.1E-08 63.0 1.9 92 342-436 87-182 (185)
61 PLN02575 haloacid dehalogenase 96.8 0.0011 2.4E-08 70.0 4.5 97 342-439 215-315 (381)
62 PRK10725 fructose-1-P/6-phosph 96.8 0.0008 1.7E-08 62.0 2.7 94 342-437 87-183 (188)
63 PRK11587 putative phosphatase; 96.8 0.0021 4.6E-08 61.4 5.5 97 342-440 82-182 (218)
64 TIGR01663 PNK-3'Pase polynucle 96.7 0.0028 6.1E-08 69.6 6.8 109 301-423 166-294 (526)
65 TIGR01422 phosphonatase phosph 96.7 0.0018 3.9E-08 63.2 4.4 98 342-439 98-200 (253)
66 PRK13226 phosphoglycolate phos 96.6 0.0021 4.6E-08 62.1 4.4 95 342-437 94-192 (229)
67 PRK13222 phosphoglycolate phos 96.6 0.0018 4E-08 61.1 3.6 93 342-435 92-188 (226)
68 TIGR01491 HAD-SF-IB-PSPlk HAD- 96.5 0.0044 9.5E-08 57.4 5.5 94 342-436 79-186 (201)
69 PRK11133 serB phosphoserine ph 96.4 0.0015 3.3E-08 67.5 2.2 95 342-437 180-288 (322)
70 PRK13223 phosphoglycolate phos 96.4 0.0031 6.7E-08 63.1 4.2 93 342-435 100-196 (272)
71 PRK09484 3-deoxy-D-manno-octul 96.4 0.0046 9.9E-08 58.3 5.0 114 302-436 20-135 (183)
72 TIGR01459 HAD-SF-IIA-hyp4 HAD- 96.4 0.0052 1.1E-07 60.0 5.5 94 304-423 9-105 (242)
73 TIGR01533 lipo_e_P4 5'-nucleot 96.4 0.0031 6.8E-08 63.6 3.9 93 301-394 73-173 (266)
74 TIGR03351 PhnX-like phosphonat 96.3 0.0028 6E-08 60.2 2.9 95 342-436 86-186 (220)
75 TIGR02247 HAD-1A3-hyp Epoxide 96.3 0.0017 3.7E-08 61.3 1.4 99 341-440 92-196 (211)
76 PRK13478 phosphonoacetaldehyde 96.3 0.006 1.3E-07 60.3 5.1 98 342-439 100-202 (267)
77 PRK10563 6-phosphogluconate ph 96.2 0.0024 5.1E-08 60.8 2.1 95 342-439 87-185 (221)
78 PRK09552 mtnX 2-hydroxy-3-keto 96.2 0.016 3.4E-07 55.6 7.6 124 342-475 73-219 (219)
79 PLN02779 haloacid dehalogenase 96.2 0.0054 1.2E-07 61.9 4.6 97 342-439 143-245 (286)
80 COG0560 SerB Phosphoserine pho 96.2 0.0091 2E-07 58.1 5.9 85 342-427 76-174 (212)
81 TIGR02252 DREG-2 REG-2-like, H 96.2 0.0049 1.1E-07 57.7 3.8 90 343-434 105-199 (203)
82 TIGR01990 bPGM beta-phosphoglu 96.2 0.0038 8.1E-08 57.2 3.0 92 342-436 86-181 (185)
83 TIGR01691 enolase-ppase 2,3-di 96.1 0.004 8.6E-08 61.0 3.2 95 342-437 94-193 (220)
84 PRK08238 hypothetical protein; 96.1 0.0057 1.2E-07 66.5 4.6 77 342-424 71-150 (479)
85 COG1011 Predicted hydrolase (H 96.1 0.0075 1.6E-07 57.0 4.9 84 342-426 98-184 (229)
86 TIGR01548 HAD-SF-IA-hyp1 haloa 95.9 0.013 2.8E-07 55.0 5.6 81 344-425 107-190 (197)
87 TIGR01549 HAD-SF-IA-v1 haloaci 95.8 0.013 2.8E-07 52.4 4.6 82 342-426 63-147 (154)
88 PLN02811 hydrolase 95.8 0.0074 1.6E-07 57.8 3.2 97 342-439 77-183 (220)
89 PLN02919 haloacid dehalogenase 95.5 0.019 4.1E-07 68.0 5.9 97 344-440 162-262 (1057)
90 COG0561 Cof Predicted hydrolas 95.4 0.05 1.1E-06 53.3 7.5 58 303-383 3-61 (264)
91 PRK06698 bifunctional 5'-methy 95.3 0.017 3.6E-07 62.0 4.1 92 342-436 329-423 (459)
92 PRK00192 mannosyl-3-phosphogly 95.2 0.052 1.1E-06 53.9 6.9 57 303-382 4-61 (273)
93 PF08282 Hydrolase_3: haloacid 95.1 0.053 1.1E-06 50.9 6.4 54 306-382 1-55 (254)
94 TIGR02726 phenyl_P_delta pheny 95.0 0.041 8.9E-07 51.9 5.4 114 302-436 6-121 (169)
95 PRK03669 mannosyl-3-phosphogly 94.9 0.085 1.8E-06 52.3 7.6 59 301-382 5-64 (271)
96 PF08645 PNK3P: Polynucleotide 94.8 0.045 9.7E-07 51.0 4.9 106 304-424 1-129 (159)
97 PF13344 Hydrolase_6: Haloacid 94.7 0.065 1.4E-06 46.2 5.4 50 306-379 1-51 (101)
98 PTZ00445 p36-lilke protein; Pr 94.7 0.043 9.2E-07 54.1 4.6 128 300-440 40-205 (219)
99 COG0241 HisB Histidinol phosph 94.5 0.055 1.2E-06 51.9 5.1 126 303-442 5-154 (181)
100 TIGR01493 HAD-SF-IA-v2 Haloaci 94.5 0.0098 2.1E-07 54.3 -0.2 77 342-425 89-168 (175)
101 PRK10513 sugar phosphate phosp 94.4 0.11 2.4E-06 50.9 7.0 57 303-382 3-60 (270)
102 TIGR01487 SPP-like sucrose-pho 94.4 0.11 2.5E-06 49.3 6.8 57 304-383 2-59 (215)
103 TIGR02461 osmo_MPG_phos mannos 94.3 0.11 2.4E-06 50.6 6.8 54 305-382 1-55 (225)
104 TIGR03333 salvage_mtnX 2-hydro 94.3 0.078 1.7E-06 50.8 5.6 94 341-434 68-177 (214)
105 PRK10530 pyridoxal phosphate ( 94.2 0.15 3.2E-06 49.8 7.4 58 303-383 3-61 (272)
106 PRK01158 phosphoglycolate phos 94.1 0.19 4.1E-06 47.9 7.7 57 304-383 4-61 (230)
107 TIGR02463 MPGP_rel mannosyl-3- 93.9 0.16 3.4E-06 48.4 6.8 54 306-382 2-56 (221)
108 KOG2914 Predicted haloacid-hal 93.9 0.017 3.6E-07 57.1 0.2 99 341-440 90-196 (222)
109 TIGR00099 Cof-subfamily Cof su 93.8 0.14 3E-06 50.0 6.3 55 305-382 1-56 (256)
110 TIGR01544 HAD-SF-IE haloacid d 93.7 0.13 2.9E-06 52.4 6.3 105 341-446 119-248 (277)
111 PRK10976 putative hydrolase; P 93.7 0.18 3.9E-06 49.4 6.9 57 304-383 3-60 (266)
112 PRK15126 thiamin pyrimidine py 93.7 0.18 3.9E-06 49.7 7.0 57 304-383 3-60 (272)
113 COG2179 Predicted hydrolase of 93.2 0.094 2E-06 50.0 3.9 117 295-440 20-141 (175)
114 PF06941 NT5C: 5' nucleotidase 93.1 0.021 4.5E-07 53.9 -0.8 79 342-436 72-158 (191)
115 COG3882 FkbH Predicted enzyme 92.9 0.13 2.7E-06 56.1 4.8 128 300-441 219-356 (574)
116 TIGR01486 HAD-SF-IIB-MPGP mann 92.9 0.26 5.6E-06 48.3 6.6 55 305-382 1-56 (256)
117 smart00775 LNS2 LNS2 domain. T 92.6 0.29 6.4E-06 45.4 6.1 63 305-379 1-67 (157)
118 TIGR01484 HAD-SF-IIB HAD-super 92.5 0.24 5.3E-06 46.4 5.7 54 305-380 1-55 (204)
119 PF09419 PGP_phosphatase: Mito 92.5 0.31 6.8E-06 46.3 6.3 96 299-424 37-147 (168)
120 TIGR01482 SPP-subfamily Sucros 92.4 0.34 7.4E-06 45.9 6.6 53 306-381 1-54 (225)
121 TIGR01488 HAD-SF-IB Haloacid D 92.2 0.4 8.6E-06 43.5 6.5 49 342-391 72-121 (177)
122 PRK10187 trehalose-6-phosphate 92.1 0.32 7E-06 48.7 6.2 59 303-379 14-74 (266)
123 PTZ00174 phosphomannomutase; P 91.7 0.44 9.5E-06 46.8 6.6 52 303-377 5-57 (247)
124 PRK10444 UMP phosphatase; Prov 91.7 0.25 5.5E-06 49.1 5.0 54 304-381 2-56 (248)
125 PRK10748 flavin mononucleotide 91.7 0.1 2.2E-06 50.9 2.1 89 342-436 112-204 (238)
126 PF06888 Put_Phosphatase: Puta 91.5 0.27 5.9E-06 48.9 4.9 49 342-391 70-121 (234)
127 TIGR01456 CECR5 HAD-superfamil 91.2 0.34 7.4E-06 49.7 5.5 53 304-380 1-62 (321)
128 PF11019 DUF2608: Protein of u 91.1 0.21 4.7E-06 50.0 3.7 101 341-441 79-210 (252)
129 PRK12702 mannosyl-3-phosphogly 91.0 0.6 1.3E-05 48.3 6.9 57 304-383 2-59 (302)
130 TIGR01458 HAD-SF-IIA-hyp3 HAD- 90.7 0.29 6.3E-06 48.6 4.3 47 304-370 2-49 (257)
131 PLN02645 phosphoglycolate phos 90.1 0.39 8.5E-06 49.0 4.7 53 303-379 28-81 (311)
132 TIGR01490 HAD-SF-IB-hyp1 HAD-s 90.0 0.4 8.6E-06 44.7 4.3 85 342-427 86-185 (202)
133 TIGR01452 PGP_euk phosphoglyco 90.0 0.47 1E-05 47.5 5.1 41 304-368 3-44 (279)
134 PLN02423 phosphomannomutase 89.6 0.74 1.6E-05 45.5 6.1 55 301-381 5-59 (245)
135 PRK14502 bifunctional mannosyl 89.1 1.3 2.8E-05 50.5 8.1 61 299-382 412-473 (694)
136 TIGR01485 SPP_plant-cyano sucr 88.9 0.82 1.8E-05 44.7 5.8 60 303-382 1-61 (249)
137 PLN02887 hydrolase family prot 88.5 1.1 2.3E-05 50.3 6.9 58 302-382 307-365 (580)
138 COG4502 5'(3')-deoxyribonucleo 88.2 1.2 2.5E-05 41.9 5.8 82 342-443 67-157 (180)
139 TIGR01457 HAD-SF-IIA-hyp2 HAD- 87.1 0.93 2E-05 44.8 5.0 53 305-381 3-59 (249)
140 TIGR01675 plant-AP plant acid 85.8 1 2.2E-05 44.9 4.4 92 300-393 74-172 (229)
141 COG2503 Predicted secreted aci 85.3 0.8 1.7E-05 46.3 3.4 79 300-379 76-160 (274)
142 COG0647 NagD Predicted sugar p 85.3 1.1 2.4E-05 45.6 4.5 53 303-379 8-61 (269)
143 PLN02151 trehalose-phosphatase 85.3 1.6 3.5E-05 46.1 5.8 60 300-377 95-154 (354)
144 TIGR01460 HAD-SF-IIA Haloacid 84.9 1.2 2.5E-05 43.6 4.4 50 306-379 1-55 (236)
145 PLN02580 trehalose-phosphatase 84.4 1.9 4E-05 46.1 5.9 61 300-378 116-176 (384)
146 PLN03017 trehalose-phosphatase 84.3 1.9 4E-05 45.9 5.8 60 300-377 108-167 (366)
147 KOG3120 Predicted haloacid deh 82.3 0.75 1.6E-05 45.9 1.8 41 342-382 83-125 (256)
148 TIGR00685 T6PP trehalose-phosp 82.2 1.3 2.7E-05 43.5 3.3 48 302-367 2-51 (244)
149 COG1877 OtsB Trehalose-6-phosp 82.0 2.7 5.8E-05 42.8 5.6 61 299-377 14-76 (266)
150 TIGR01511 ATPase-IB1_Cu copper 81.4 2.5 5.5E-05 46.9 5.7 86 341-436 403-489 (562)
151 PF00702 Hydrolase: haloacid d 81.0 1.5 3.2E-05 40.5 3.2 80 341-424 125-206 (215)
152 TIGR02244 HAD-IG-Ncltidse HAD 80.4 2.3 5.1E-05 44.7 4.7 53 339-391 180-240 (343)
153 COG4359 Uncharacterized conser 78.2 5.6 0.00012 39.0 6.1 41 342-382 72-113 (220)
154 PRK10725 fructose-1-P/6-phosph 77.8 1.3 2.9E-05 40.6 1.8 16 303-318 5-20 (188)
155 PRK11587 putative phosphatase; 76.6 1.4 3E-05 42.1 1.6 15 304-318 4-18 (218)
156 PF03767 Acid_phosphat_B: HAD 75.3 0.48 1E-05 46.7 -2.0 73 301-379 70-152 (229)
157 PRK11590 hypothetical protein; 73.4 1.9 4.2E-05 41.2 1.7 39 342-380 94-134 (211)
158 TIGR01548 HAD-SF-IA-hyp1 haloa 73.4 1.6 3.4E-05 41.0 1.0 14 305-318 2-15 (197)
159 TIGR01525 ATPase-IB_hvy heavy 73.3 4.9 0.00011 44.4 5.1 79 341-428 382-462 (556)
160 PRK14501 putative bifunctional 73.1 6.3 0.00014 45.0 6.0 62 300-379 489-552 (726)
161 TIGR01993 Pyr-5-nucltdase pyri 72.2 2.1 4.5E-05 39.5 1.6 14 305-318 2-15 (184)
162 PRK11590 hypothetical protein; 71.2 6.1 0.00013 37.8 4.6 17 302-318 5-21 (211)
163 TIGR02253 CTE7 HAD superfamily 70.9 2.4 5.2E-05 40.0 1.7 15 304-318 3-17 (221)
164 PF05116 S6PP: Sucrose-6F-phos 70.3 6.8 0.00015 38.8 4.8 54 303-380 2-57 (247)
165 TIGR02471 sucr_syn_bact_C sucr 70.1 6.4 0.00014 38.0 4.5 54 305-382 1-54 (236)
166 TIGR03351 PhnX-like phosphonat 70.1 2.4 5.2E-05 40.1 1.5 15 304-318 2-16 (220)
167 COG3769 Predicted hydrolase (H 70.0 13 0.00029 37.4 6.6 59 303-385 7-66 (274)
168 TIGR02009 PGMB-YQAB-SF beta-ph 69.8 2.3 5.1E-05 38.7 1.3 15 304-318 2-16 (185)
169 PRK13223 phosphoglycolate phos 69.3 2.8 6E-05 42.0 1.8 16 303-318 13-28 (272)
170 PRK13226 phosphoglycolate phos 69.2 2.5 5.5E-05 40.8 1.5 16 303-318 12-27 (229)
171 TIGR01422 phosphonatase phosph 68.6 2.9 6.3E-05 40.7 1.8 15 304-318 3-17 (253)
172 PLN03243 haloacid dehalogenase 68.1 3.2 6.9E-05 41.5 2.0 20 299-318 20-39 (260)
173 TIGR02252 DREG-2 REG-2-like, H 68.0 2.6 5.7E-05 39.3 1.3 14 305-318 2-15 (203)
174 TIGR01545 YfhB_g-proteo haloac 67.7 12 0.00026 36.2 5.8 38 342-379 93-132 (210)
175 PLN02770 haloacid dehalogenase 67.7 3 6.5E-05 40.9 1.6 16 303-318 22-37 (248)
176 PRK13478 phosphonoacetaldehyde 67.1 3 6.5E-05 41.2 1.6 16 303-318 4-19 (267)
177 PRK10748 flavin mononucleotide 67.1 3.2 6.9E-05 40.4 1.7 15 304-318 11-25 (238)
178 TIGR01512 ATPase-IB2_Cd heavy 66.6 4.4 9.5E-05 44.7 2.9 85 341-434 360-446 (536)
179 TIGR01549 HAD-SF-IA-v1 haloaci 66.0 2.6 5.6E-05 37.5 0.8 14 305-318 1-14 (154)
180 TIGR01454 AHBA_synth_RP 3-amin 64.5 2.7 5.8E-05 39.5 0.6 13 306-318 1-13 (205)
181 TIGR01990 bPGM beta-phosphoglu 64.3 3.2 7E-05 37.8 1.1 14 305-318 1-14 (185)
182 KOG3085 Predicted hydrolase (H 63.4 2.8 6.1E-05 42.0 0.5 85 341-428 112-201 (237)
183 TIGR01680 Veg_Stor_Prot vegeta 62.8 15 0.00033 37.7 5.6 91 302-393 100-197 (275)
184 PRK10826 2-deoxyglucose-6-phos 62.7 4.5 9.7E-05 38.5 1.8 17 302-318 6-22 (222)
185 TIGR01449 PGP_bact 2-phosphogl 62.4 3.1 6.6E-05 38.9 0.6 13 306-318 1-13 (213)
186 TIGR01491 HAD-SF-IB-PSPlk HAD- 62.1 4.6 0.0001 37.2 1.7 16 303-318 4-19 (201)
187 PLN02779 haloacid dehalogenase 62.0 4.2 9.1E-05 41.1 1.5 18 301-318 38-55 (286)
188 PRK09449 dUMP phosphatase; Pro 61.7 4 8.7E-05 38.7 1.3 14 304-317 4-17 (224)
189 TIGR01428 HAD_type_II 2-haloal 61.5 4.2 9.1E-05 37.9 1.3 15 304-318 2-16 (198)
190 TIGR01493 HAD-SF-IA-v2 Haloaci 61.5 4 8.6E-05 37.1 1.1 13 306-318 2-14 (175)
191 TIGR02254 YjjG/YfnB HAD superf 61.4 4.1 9E-05 38.2 1.3 15 304-318 2-16 (224)
192 TIGR02247 HAD-1A3-hyp Epoxide 61.1 4.8 0.0001 37.9 1.6 15 304-318 3-17 (211)
193 PRK13222 phosphoglycolate phos 60.6 4.4 9.5E-05 38.2 1.3 15 304-318 7-21 (226)
194 PF13419 HAD_2: Haloacid dehal 59.0 4.6 0.0001 35.4 1.1 13 306-318 1-13 (176)
195 PRK10563 6-phosphogluconate ph 58.9 5.3 0.00012 37.8 1.6 16 303-318 4-19 (221)
196 TIGR01509 HAD-SF-IA-v3 haloaci 56.5 5 0.00011 36.2 0.9 13 306-318 2-14 (183)
197 PF08235 LNS2: LNS2 (Lipin/Ned 56.4 22 0.00048 33.6 5.2 62 306-379 2-64 (157)
198 PF02358 Trehalose_PPase: Treh 56.0 17 0.00037 35.3 4.5 50 307-374 1-52 (235)
199 PF12710 HAD: haloacid dehalog 55.0 10 0.00022 34.6 2.7 47 344-390 86-138 (192)
200 PLN02205 alpha,alpha-trehalose 53.3 23 0.00051 41.7 5.8 59 301-379 594-654 (854)
201 PLN02382 probable sucrose-phos 50.6 40 0.00087 36.2 6.7 17 301-317 7-23 (413)
202 PLN03063 alpha,alpha-trehalose 49.0 32 0.0007 40.1 6.1 64 300-378 504-569 (797)
203 PRK06698 bifunctional 5'-methy 46.9 7.8 0.00017 41.7 0.6 16 303-318 241-256 (459)
204 PLN02575 haloacid dehalogenase 45.5 11 0.00024 40.2 1.6 19 300-318 128-146 (381)
205 PRK09552 mtnX 2-hydroxy-3-keto 45.4 12 0.00026 35.8 1.6 16 303-318 3-18 (219)
206 PF05822 UMPH-1: Pyrimidine 5' 44.1 25 0.00054 35.6 3.7 100 341-440 88-211 (246)
207 TIGR01545 YfhB_g-proteo haloac 43.8 13 0.00028 36.0 1.5 16 303-318 5-20 (210)
208 COG1011 Predicted hydrolase (H 43.2 15 0.00032 34.6 1.8 16 303-318 4-19 (229)
209 PLN03064 alpha,alpha-trehalose 43.2 46 0.00099 39.7 6.1 71 300-379 588-660 (934)
210 PRK09456 ?-D-glucose-1-phospha 41.8 14 0.00031 34.6 1.5 14 305-318 2-15 (199)
211 KOG2134 Polynucleotide kinase 37.4 51 0.0011 35.7 4.9 58 301-368 73-130 (422)
212 TIGR02826 RNR_activ_nrdG3 anae 37.1 70 0.0015 29.6 5.2 71 331-421 65-137 (147)
213 PRK10671 copA copper exporting 33.8 34 0.00074 39.9 3.2 83 343-434 650-733 (834)
214 PF08484 Methyltransf_14: C-me 33.4 1.2E+02 0.0025 28.5 6.2 66 344-440 53-120 (160)
215 PF05761 5_nucleotid: 5' nucle 32.6 76 0.0017 34.8 5.4 52 340-391 180-240 (448)
216 TIGR01488 HAD-SF-IB Haloacid D 32.1 21 0.00047 32.1 1.0 13 306-318 2-14 (177)
217 PF12710 HAD: haloacid dehalog 30.9 27 0.00059 31.7 1.5 13 306-318 1-13 (192)
218 PLN02177 glycerol-3-phosphate 30.5 40 0.00088 37.3 2.9 23 360-382 124-147 (497)
219 TIGR01490 HAD-SF-IB-hyp1 HAD-s 28.9 27 0.0006 32.3 1.2 13 306-318 2-14 (202)
220 PLN02919 haloacid dehalogenase 24.5 43 0.00092 40.4 1.9 18 301-318 73-90 (1057)
221 COG4229 Predicted enolase-phos 23.3 62 0.0014 31.9 2.4 90 343-434 103-198 (229)
222 cd06537 CIDE_N_B CIDE_N domain 23.1 1.3E+02 0.0028 25.7 4.0 15 303-317 39-53 (81)
223 cd06539 CIDE_N_A CIDE_N domain 21.7 1.4E+02 0.0031 25.2 4.0 15 303-317 40-54 (78)
224 KOG3189 Phosphomannomutase [Li 21.6 1.3E+02 0.0028 30.1 4.3 42 300-364 8-49 (252)
225 PF00702 Hydrolase: haloacid d 21.2 54 0.0012 30.1 1.6 14 305-318 3-16 (215)
226 COG3700 AphA Acid phosphatase 20.7 81 0.0018 31.1 2.6 125 299-447 59-197 (237)
227 cd06536 CIDE_N_ICAD CIDE_N dom 20.6 1.5E+02 0.0033 25.1 4.0 16 302-317 41-56 (80)
No 1
>KOG1605 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=100.00 E-value=1e-47 Score=379.71 Aligned_cols=180 Identities=59% Similarity=0.969 Sum_probs=172.7
Q ss_pred CCccCCCCceEEEEecCccccccc--ccccCCCCceEEEEeccccceEEEeeCchHHHHHHHhhcccEEEEEcCCcHHHH
Q 011855 295 PKETQGRKSVTLVLDLDETLVHST--LEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYA 372 (476)
Q Consensus 295 P~~~~~~kk~tLVLDLDeTLVhSs--~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Lsk~YEIVIfTAs~~~YA 372 (476)
|......+|++|||||||||||++ ..+...++|.+++.+++..+.+||.+|||+++||++++++||++||||+.+.||
T Consensus 81 ~~~~~~~~kk~lVLDLDeTLvHss~~~~~~~~~d~~~~v~~~~~~~~~yV~kRP~vdeFL~~~s~~~e~v~FTAs~~~Ya 160 (262)
T KOG1605|consen 81 PLRLATVGRKTLVLDLDETLVHSSLNLKPIVNADFTVPVEIDGHIHQVYVRKRPHVDEFLSRVSKWYELVLFTASLEVYA 160 (262)
T ss_pred CcccccCCCceEEEeCCCcccccccccCCCCCcceeeeeeeCCcceEEEEEcCCCHHHHHHHhHHHHHHHHHHhhhHHHH
Confidence 344557889999999999999999 777789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHCCCCCeeeeEEEcccceeeCCceeecccccCCCCCcEEEEECCchhhccCCCceeeeccccCCCCchHHHHHH
Q 011855 373 AQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIESWFDDPSDCSLISLL 452 (476)
Q Consensus 373 ~~ILd~LDP~~~lF~~RLyRe~C~~~~g~yiKDLs~LGrdlskVVIIDDsp~s~~~q~~NgIpI~~f~gd~~D~eLl~Ll 452 (476)
.+|++.|||.++.|.+|+||++|.+.+|.|+|||+.+|+++++||||||+|.+|.+||+|||||++|++++.|+||++|+
T Consensus 161 ~~v~D~LD~~~~i~~~RlyR~~C~~~~g~yvKdls~~~~dL~~viIiDNsP~sy~~~p~NgIpI~sw~~d~~D~eLL~Ll 240 (262)
T KOG1605|consen 161 DPLLDILDPDRKIISHRLYRDSCTLKDGNYVKDLSVLGRDLSKVIIVDNSPQSYRLQPENGIPIKSWFDDPTDTELLKLL 240 (262)
T ss_pred HHHHHHccCCCCeeeeeecccceEeECCcEEEEcceeccCcccEEEEcCChHHhccCccCCCcccccccCCChHHHHHHH
Confidence 99999999988899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCcHHHHHhhhCC
Q 011855 453 PFLDILADAEDVRPIIAKTFGN 474 (476)
Q Consensus 453 pfLe~L~~~dDVR~~L~krf~~ 474 (476)
|||+.|+..+|||++++++|+.
T Consensus 241 pfLe~L~~~~Dvr~~l~~~~~~ 262 (262)
T KOG1605|consen 241 PFLEALAFVDDVRPILARRFGN 262 (262)
T ss_pred HHHHHhcccccHHHHHHHhhcC
Confidence 9999999999999999999974
No 2
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=100.00 E-value=4.7e-40 Score=303.65 Aligned_cols=161 Identities=57% Similarity=0.931 Sum_probs=153.5
Q ss_pred ceEEEEecCcccccccccccC-CCCceEEEEeccccceEEEeeCchHHHHHHHhhcccEEEEEcCCcHHHHHHHHHHHCC
Q 011855 303 SVTLVLDLDETLVHSTLEYCD-DADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDP 381 (476)
Q Consensus 303 k~tLVLDLDeTLVhSs~~~~~-~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Lsk~YEIVIfTAs~~~YA~~ILd~LDP 381 (476)
|+||||||||||||+++.+.. ..++.+.+..++....+||++|||+.+||++|+++|||+|||++.+.||++|++.|||
T Consensus 1 k~~lvlDLDeTLi~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l~~~yei~I~Ts~~~~yA~~il~~ldp 80 (162)
T TIGR02251 1 KKTLVLDLDETLVHSTFKMPKVDADFKVPVLIDGKIIPVYVFKRPHVDEFLERVSKWYELVIFTASLEEYADPVLDILDR 80 (162)
T ss_pred CcEEEEcCCCCcCCCCCCCCCCCCceEEEEEecCcEEEEEEEECCCHHHHHHHHHhcCEEEEEcCCcHHHHHHHHHHHCc
Confidence 579999999999999988765 6788888888888889999999999999999999999999999999999999999999
Q ss_pred CCCeeeeEEEcccceeeCCceeecccccCCCCCcEEEEECCchhhccCCCceeeeccccCCCCchHHHHHHHHHHhccCC
Q 011855 382 DGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIESWFDDPSDCSLISLLPFLDILADA 461 (476)
Q Consensus 382 ~~~lF~~RLyRe~C~~~~g~yiKDLs~LGrdlskVVIIDDsp~s~~~q~~NgIpI~~f~gd~~D~eLl~LlpfLe~L~~~ 461 (476)
.+.+|.+++||++|....+.+.|+|+++|+++++||||||++..|..|++|||+|.+|.|+.+|++|++|++||+.|+..
T Consensus 81 ~~~~f~~~l~r~~~~~~~~~~~K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i~~f~~~~~D~~L~~l~~~L~~l~~~ 160 (162)
T TIGR02251 81 GGKVISRRLYRESCVFTNGKYVKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPIKSWFGDPNDTELLNLIPFLEGLRFE 160 (162)
T ss_pred CCCEEeEEEEccccEEeCCCEEeEchhcCCChhhEEEEeCChhhhccCccCEeecCCCCCCCCHHHHHHHHHHHHHHhcc
Confidence 98899999999999998888999999999999999999999999999999999999999999999999999999999988
Q ss_pred CC
Q 011855 462 ED 463 (476)
Q Consensus 462 dD 463 (476)
+|
T Consensus 161 ~~ 162 (162)
T TIGR02251 161 DD 162 (162)
T ss_pred CC
Confidence 76
No 3
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=100.00 E-value=3.6e-38 Score=286.31 Aligned_cols=158 Identities=51% Similarity=0.856 Sum_probs=130.4
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEeccccceEEEeeCchHHHHHHHhhcccEEEEEcCCcHHHHHHHHHHHCCCC
Q 011855 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDG 383 (476)
Q Consensus 304 ~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Lsk~YEIVIfTAs~~~YA~~ILd~LDP~~ 383 (476)
|||||||||||||+...+....++... . ....++|++|||+++||++++++|||+|||++.+.||++|++.|+|.+
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~~~~~~~---~-~~~~~~v~~RP~l~~FL~~l~~~~ev~i~T~~~~~ya~~v~~~ldp~~ 76 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLPYDFKII---D-QRGGYYVKLRPGLDEFLEELSKHYEVVIWTSASEEYAEPVLDALDPNG 76 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT-SEEEE---T-EEEEEEEEE-TTHHHHHHHHHHHCEEEEE-SS-HHHHHHHHHHHTTTT
T ss_pred CEEEEeCCCcEEEEeecCCCCccccee---c-cccceeEeeCchHHHHHHHHHHhceEEEEEeehhhhhhHHHHhhhhhc
Confidence 699999999999998765543333222 2 556789999999999999999999999999999999999999999988
Q ss_pred CeeeeEEEcccceeeCCceeecccccCCCCCcEEEEECCchhhccCCCceeeeccccCC-CCchHHHHHHHHHHhccCCC
Q 011855 384 KLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIESWFDD-PSDCSLISLLPFLDILADAE 462 (476)
Q Consensus 384 ~lF~~RLyRe~C~~~~g~yiKDLs~LGrdlskVVIIDDsp~s~~~q~~NgIpI~~f~gd-~~D~eLl~LlpfLe~L~~~d 462 (476)
.+|.++++|++|....+.++|||+++|+++++||||||++.+|..+++|+|+|++|.++ .+|++|++|++||+.|+..+
T Consensus 77 ~~~~~~~~r~~~~~~~~~~~KdL~~l~~~~~~vvivDD~~~~~~~~~~N~i~v~~f~~~~~~D~~L~~l~~~L~~l~~~~ 156 (159)
T PF03031_consen 77 KLFSRRLYRDDCTFDKGSYIKDLSKLGRDLDNVVIVDDSPRKWALQPDNGIPVPPFFGDTPNDRELLRLLPFLEELAKED 156 (159)
T ss_dssp SSEEEEEEGGGSEEETTEEE--GGGSSS-GGGEEEEES-GGGGTTSGGGEEE----SSCHTT--HHHHHHHHHHHHHTHS
T ss_pred cccccccccccccccccccccchHHHhhccccEEEEeCCHHHeeccCCceEEeccccCCCcchhHHHHHHHHHHHhCccc
Confidence 89999999999999888889999999999999999999999999999999999999999 99999999999999999999
Q ss_pred CcH
Q 011855 463 DVR 465 (476)
Q Consensus 463 DVR 465 (476)
|||
T Consensus 157 Dvr 159 (159)
T PF03031_consen 157 DVR 159 (159)
T ss_dssp -CH
T ss_pred CCC
Confidence 998
No 4
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=100.00 E-value=4.9e-36 Score=286.00 Aligned_cols=159 Identities=23% Similarity=0.275 Sum_probs=136.9
Q ss_pred CCCceEEEEecCcccccccccccCCCCceEEEEeccccceEEEeeCchHHHHHHHhhcccEEEEEcCCcHHHHHHHHHHH
Q 011855 300 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDIL 379 (476)
Q Consensus 300 ~~kk~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Lsk~YEIVIfTAs~~~YA~~ILd~L 379 (476)
..+|+||||||||||||+.+.. ...++.+|||+++||++++++|||+||||+++.||+.+++.|
T Consensus 18 ~~~kklLVLDLDeTLvh~~~~~----------------~~~~~~kRP~l~eFL~~~~~~feIvVwTAa~~~ya~~~l~~l 81 (195)
T TIGR02245 18 REGKKLLVLDIDYTLFDHRSPA----------------ETGEELMRPYLHEFLTSAYEDYDIVIWSATSMKWIEIKMTEL 81 (195)
T ss_pred CCCCcEEEEeCCCceEcccccC----------------CCceEEeCCCHHHHHHHHHhCCEEEEEecCCHHHHHHHHHHh
Confidence 5678999999999999974221 145789999999999999999999999999999999999999
Q ss_pred CCCC-CeeeeEEEcccce------eeCCc-eeecccccC------CCCCcEEEEECCchhhccCCCceeeeccccC----
Q 011855 380 DPDG-KLISRRVYRESCI------FSDGT-YTKDLTVLG------VDLAKVAIIDNSPQVFRLQVNNGIPIESWFD---- 441 (476)
Q Consensus 380 DP~~-~lF~~RLyRe~C~------~~~g~-yiKDLs~LG------rdlskVVIIDDsp~s~~~q~~NgIpI~~f~g---- 441 (476)
++.+ ..+..++++++|. ...|. ++|||+.++ .++++||||||+|.++.+||+|||+|++|++
T Consensus 82 ~~~~~~~~~i~~~ld~~~~~~~~~~~~g~~~vKdL~~lw~~l~~~~~~~ntiiVDd~p~~~~~~P~N~i~I~~f~~~~~~ 161 (195)
T TIGR02245 82 GVLTNPNYKITFLLDSTAMITVHTPRRGKFDVKPLGVIWALLPEFYSMKNTIMFDDLRRNFLMNPQNGLKIRPFKKAHAN 161 (195)
T ss_pred cccCCccceEEEEeccccceeeEeeccCcEEEeecHHhhhhcccCCCcccEEEEeCCHHHHhcCCCCccccCCccccCCC
Confidence 8643 2355667778883 23454 599999873 3889999999999999999999999999995
Q ss_pred CCCchHHHHHHHHHHhccCCCCcHHHHHhhhCC
Q 011855 442 DPSDCSLISLLPFLDILADAEDVRPIIAKTFGN 474 (476)
Q Consensus 442 d~~D~eLl~LlpfLe~L~~~dDVR~~L~krf~~ 474 (476)
+..|+||+.|+|||+.|+.++|||++++++|..
T Consensus 162 ~~~D~eL~~L~~yL~~la~~~Dvr~~~~~~w~~ 194 (195)
T TIGR02245 162 RGTDQELLKLTQYLKTIAELEDFSSLDHKEWER 194 (195)
T ss_pred CcccHHHHHHHHHHHHHhcCcccchhhhccccc
Confidence 579999999999999999999999999998863
No 5
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=99.97 E-value=7.4e-31 Score=242.01 Aligned_cols=138 Identities=31% Similarity=0.449 Sum_probs=117.7
Q ss_pred CCCceEEEEecCcccccccccccCCCCce------------EEEEeccccceEEEeeCchHHHHHHHhhcccEEEEEcCC
Q 011855 300 GRKSVTLVLDLDETLVHSTLEYCDDADFT------------FTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTAS 367 (476)
Q Consensus 300 ~~kk~tLVLDLDeTLVhSs~~~~~~~df~------------~~v~~~~~~~~~~V~lRPgl~eFLe~Lsk~YEIVIfTAs 367 (476)
.++|++||||||||||||+..+....... -...|.......++++|||+.+||+++++.|+++|||++
T Consensus 3 ~~~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~efL~~l~~~yel~I~T~~ 82 (156)
T TIGR02250 3 REKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFLKEASKLYEMHVYTMG 82 (156)
T ss_pred cCCceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHHHHHHHhhcEEEEEeCC
Confidence 57899999999999999987654322111 012333335678999999999999999999999999999
Q ss_pred cHHHHHHHHHHHCCCCCeeeeE-EEcccceeeCCceeeccc-ccCCCCCcEEEEECCchhhccCCCceeeecccc
Q 011855 368 QSIYAAQLLDILDPDGKLISRR-VYRESCIFSDGTYTKDLT-VLGVDLAKVAIIDNSPQVFRLQVNNGIPIESWF 440 (476)
Q Consensus 368 ~~~YA~~ILd~LDP~~~lF~~R-LyRe~C~~~~g~yiKDLs-~LGrdlskVVIIDDsp~s~~~q~~NgIpI~~f~ 440 (476)
.+.||++|++.|||.+.+|.+| ++|++|. |.+.|||+ .+|+++++||||||++.+|..|++|+|+|++|.
T Consensus 83 ~~~yA~~vl~~ldp~~~~F~~ri~~rd~~~---~~~~KdL~~i~~~d~~~vvivDd~~~~~~~~~~N~i~i~~~~ 154 (156)
T TIGR02250 83 TRAYAQAIAKLIDPDGKYFGDRIISRDESG---SPHTKSLLRLFPADESMVVIIDDREDVWPWHKRNLIQIEPYN 154 (156)
T ss_pred cHHHHHHHHHHhCcCCCeeccEEEEeccCC---CCccccHHHHcCCCcccEEEEeCCHHHhhcCccCEEEeCCcc
Confidence 9999999999999999899766 5699995 78899995 569999999999999999999999999999995
No 6
>KOG2832 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=99.97 E-value=5.3e-31 Score=267.46 Aligned_cols=161 Identities=35% Similarity=0.665 Sum_probs=151.3
Q ss_pred ccCCCCceEEEEecCcccccccccccCCCCceEEEEeccccceEEEeeCchHHHHHHHhhcccEEEEEcCCcHHHHHHHH
Q 011855 297 ETQGRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLL 376 (476)
Q Consensus 297 ~~~~~kk~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Lsk~YEIVIfTAs~~~YA~~IL 376 (476)
++..++++||||+|.++|||..|.. ..+|.+++|||++.||..++++|||||||+...-||.+|+
T Consensus 183 pPy~Qp~yTLVleledvLVhpdws~---------------~tGwRf~kRPgvD~FL~~~a~~yEIVi~sse~gmt~~pl~ 247 (393)
T KOG2832|consen 183 PPYEQPPYTLVLELEDVLVHPDWSY---------------KTGWRFKKRPGVDYFLGHLAKYYEIVVYSSEQGMTVFPLL 247 (393)
T ss_pred CcccCCCceEEEEeeeeEeccchhh---------------hcCceeccCchHHHHHHhhcccceEEEEecCCccchhhhH
Confidence 3456889999999999999998873 3689999999999999999999999999999999999999
Q ss_pred HHHCCCCCeeeeEEEcccceeeCCceeecccccCCCCCcEEEEECCchhhccCCCceeeeccccCCCCchHHHHHHHHHH
Q 011855 377 DILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIESWFDDPSDCSLISLLPFLD 456 (476)
Q Consensus 377 d~LDP~~~lF~~RLyRe~C~~~~g~yiKDLs~LGrdlskVVIIDDsp~s~~~q~~NgIpI~~f~gd~~D~eLl~LlpfLe 456 (476)
+.|||.| +|.++|+|++|.+.+|..+|||+.|+||+++||+||=.+.++.+||+|.|++++|.|+.+|+.|++|++||+
T Consensus 248 d~lDP~g-~IsYkLfr~~t~y~~G~HvKdls~LNRdl~kVivVd~d~~~~~l~P~N~l~l~~W~Gn~dDt~L~dL~~FL~ 326 (393)
T KOG2832|consen 248 DALDPKG-YISYKLFRGATKYEEGHHVKDLSKLNRDLQKVIVVDFDANSYKLQPENMLPLEPWSGNDDDTSLFDLLAFLE 326 (393)
T ss_pred hhcCCcc-eEEEEEecCcccccCccchhhhhhhccccceeEEEEccccccccCcccccccCcCCCCcccchhhhHHHHHH
Confidence 9999997 899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccC--CCCcHHHHHhhhCC
Q 011855 457 ILAD--AEDVRPIIAKTFGN 474 (476)
Q Consensus 457 ~L~~--~dDVR~~L~krf~~ 474 (476)
.|+. ++|||++|+ .|..
T Consensus 327 ~ia~~~~eDvR~vL~-~y~~ 345 (393)
T KOG2832|consen 327 YIAQQQVEDVRPVLQ-SYSQ 345 (393)
T ss_pred HHHHccHHHHHHHHH-Hhcc
Confidence 9985 899999994 5543
No 7
>COG5190 FCP1 TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=99.95 E-value=3e-28 Score=252.17 Aligned_cols=175 Identities=45% Similarity=0.741 Sum_probs=165.5
Q ss_pred ccCCCCceEEEEecCcccccccccccCCCCceEEEEeccccceEEEeeCchHHHHHHHhhcccEEEEEcCCcHHHHHHHH
Q 011855 297 ETQGRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLL 376 (476)
Q Consensus 297 ~~~~~kk~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Lsk~YEIVIfTAs~~~YA~~IL 376 (476)
......+++|++|||+||+|+....+...+|...+......+.+||.+||++++||..++++|++++||++.+.||++|+
T Consensus 206 ~~~~~~~k~L~l~lde~l~~S~~~~~~~~df~~~~e~~~~~~~~~v~kRp~l~~fl~~ls~~~~l~~ft~s~~~y~~~v~ 285 (390)
T COG5190 206 SKSTSPKKTLVLDLDETLVHSSFRYITLLDFLVKVEISLLQHLVYVSKRPELDYFLGKLSKIHELVYFTASVKRYADPVL 285 (390)
T ss_pred hcCCCCccccccCCCccceeeccccccccchhhccccccceeEEEEcCChHHHHHHhhhhhhEEEEEEecchhhhcchHH
Confidence 34567788999999999999999888888888888877788999999999999999999999999999999999999999
Q ss_pred HHHCCCCCeeeeEEEcccceeeCCceeecccccCCCCCcEEEEECCchhhccCCCceeeeccccCCCCchHHHHHHHHHH
Q 011855 377 DILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIESWFDDPSDCSLISLLPFLD 456 (476)
Q Consensus 377 d~LDP~~~lF~~RLyRe~C~~~~g~yiKDLs~LGrdlskVVIIDDsp~s~~~q~~NgIpI~~f~gd~~D~eLl~LlpfLe 456 (476)
++|++.+ .|.+++||++|....|.|+|||..+||++.+|||||++|.+|.++|+|+|+|++|.+++.|.+|+.|++||+
T Consensus 286 d~l~~~k-~~~~~lfr~sc~~~~G~~ikDis~i~r~l~~viiId~~p~SY~~~p~~~i~i~~W~~d~~d~el~~ll~~le 364 (390)
T COG5190 286 DILDSDK-VFSHRLFRESCVSYLGVYIKDISKIGRSLDKVIIIDNSPASYEFHPENAIPIEKWISDEHDDELLNLLPFLE 364 (390)
T ss_pred Hhccccc-eeehhhhcccceeccCchhhhHHhhccCCCceEEeeCChhhhhhCccceeccCcccccccchhhhhhccccc
Confidence 9999998 899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccC--CCCcHHHHHhhh
Q 011855 457 ILAD--AEDVRPIIAKTF 472 (476)
Q Consensus 457 ~L~~--~dDVR~~L~krf 472 (476)
.|.. ..||+.++..+-
T Consensus 365 ~L~~~~~~d~~~~l~~~~ 382 (390)
T COG5190 365 DLPDRDLKDVSSILQSRL 382 (390)
T ss_pred ccccccchhhhhhhhhhh
Confidence 9997 899999987663
No 8
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=99.94 E-value=3.7e-26 Score=207.31 Aligned_cols=145 Identities=49% Similarity=0.859 Sum_probs=129.7
Q ss_pred CceEEEEecCcccccccc---cccCCCCceEEEEeccccceEEEeeCchHHHHHHHhhcccEEEEEcCCcHHHHHHHHHH
Q 011855 302 KSVTLVLDLDETLVHSTL---EYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDI 378 (476)
Q Consensus 302 kk~tLVLDLDeTLVhSs~---~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Lsk~YEIVIfTAs~~~YA~~ILd~ 378 (476)
||++|||||||||||+.. .+.....+...+.+......+++++|||+.+||++|.+.|+++|||++.+.||+.+++.
T Consensus 1 ~k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~~~~~l~I~Ts~~~~~~~~il~~ 80 (148)
T smart00577 1 KKKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRASELFELVVFTAGLRMYADPVLDL 80 (148)
T ss_pred CCcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHHhccEEEEEeCCcHHHHHHHHHH
Confidence 578999999999999963 22233455666667788889999999999999999999999999999999999999999
Q ss_pred HCCCCCeeeeEEEcccceeeCCceeecccccCCCCCcEEEEECCchhhccCCCceeeeccccCCCCch
Q 011855 379 LDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIESWFDDPSDC 446 (476)
Q Consensus 379 LDP~~~lF~~RLyRe~C~~~~g~yiKDLs~LGrdlskVVIIDDsp~s~~~q~~NgIpI~~f~gd~~D~ 446 (476)
+++.+.+|..++++++|......|.|+|+++|++++++|+|||++..|..++.|||+|++|.++.+|+
T Consensus 81 l~~~~~~f~~i~~~~d~~~~KP~~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~~f~~~~~d~ 148 (148)
T smart00577 81 LDPKKYFGYRRLFRDECVFVKGKYVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIKPWFGDPDDT 148 (148)
T ss_pred hCcCCCEeeeEEECccccccCCeEeecHHHcCCChhcEEEEECCHHHhhcCccCEEEecCcCCCCCCC
Confidence 99976577999999999887767999999999999999999999999999999999999999998874
No 9
>KOG0323 consensus TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=99.76 E-value=1.6e-18 Score=188.70 Aligned_cols=137 Identities=31% Similarity=0.440 Sum_probs=108.8
Q ss_pred CCceEEEEecCcccccccccccC--------CCCc-------eEEEEeccccceEEEeeCchHHHHHHHhhcccEEEEEc
Q 011855 301 RKSVTLVLDLDETLVHSTLEYCD--------DADF-------TFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFT 365 (476)
Q Consensus 301 ~kk~tLVLDLDeTLVhSs~~~~~--------~~df-------~~~v~~~~~~~~~~V~lRPgl~eFLe~Lsk~YEIVIfT 365 (476)
++++.||+|||.||+|+...+.- .... .+.+........+||++|||+.+||++++++||++|||
T Consensus 144 ~~~L~lv~Dld~tllh~~~~~~l~e~~~~l~~~~~~~~sn~dl~~~~~~~~~~~~~vKlRP~~~efL~~~sklfemhVyT 223 (635)
T KOG0323|consen 144 RKKLHLVLDLDHTLLHTILKSDLSETEKYLKEEAESVESNKDLFRFNPLGHDTEYLVKLRPFVHEFLKEANKLFEMHVYT 223 (635)
T ss_pred hhcceeehhhhhHHHHhhccchhhhhhhhcccccccccccccceeecccCCCceEEEEeCccHHHHHHHHHhhceeEEEe
Confidence 34479999999999999743211 0000 11111113334689999999999999999999999999
Q ss_pred CCcHHHHHHHHHHHCCCCCeeeeEEE-cccceeeCCceeeccccc-CCCCCcEEEEECCchhhccCCCceeeecccc
Q 011855 366 ASQSIYAAQLLDILDPDGKLISRRVY-RESCIFSDGTYTKDLTVL-GVDLAKVAIIDNSPQVFRLQVNNGIPIESWF 440 (476)
Q Consensus 366 As~~~YA~~ILd~LDP~~~lF~~RLy-Re~C~~~~g~yiKDLs~L-GrdlskVVIIDDsp~s~~~q~~NgIpI~~f~ 440 (476)
.|.+.||..|++.|||.|+||.+|++ |+. ....-.+||..+ .++.++||||||+..+|..++.|.|.|.+|.
T Consensus 224 mg~R~YA~~i~~liDP~~~lF~dRIisrde---~~~~kt~dL~~~~p~g~smvvIIDDr~dVW~~~~~nLI~i~~y~ 297 (635)
T KOG0323|consen 224 MGTRDYALEIAKLIDPEGKYFGDRIISRDE---SPFFKTLDLVLLFPCGDSMVVIIDDRSDVWPDHKRNLIQIAPYP 297 (635)
T ss_pred ccchHHHHHHHHHhCCCCccccceEEEecC---CCcccccccccCCCCCCccEEEEeCccccccCCCcceEEeeeee
Confidence 99999999999999999999999887 665 444556778776 4577889999999999999999999999984
No 10
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=98.58 E-value=1.5e-07 Score=89.06 Aligned_cols=137 Identities=15% Similarity=0.074 Sum_probs=91.5
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEecc----ccceEEEeeCchHHHHHHHhh-cccEEEEEcCC-cHHHHHHHHH
Q 011855 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNM----KEHTVYVKQRPHLKTFLERVA-EMFEVVIFTAS-QSIYAAQLLD 377 (476)
Q Consensus 304 ~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~----~~~~~~V~lRPgl~eFLe~Ls-k~YEIVIfTAs-~~~YA~~ILd 377 (476)
.++|||||+||...........-+.. +.-+. ..+...+.++||+.++|++|. +.+.+.|.|++ ...++..+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~ 81 (174)
T TIGR01685 3 RVIVFDLDGTLWDHYMISLLGGPFKP-VKQNNSIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILG 81 (174)
T ss_pred cEEEEeCCCCCcCcccccccCCCcee-ccCCCCeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHH
Confidence 47899999999654322221111110 00000 112345888999999999998 67999999988 9999999999
Q ss_pred HHCCC--C------CeeeeEEEcccceeeCC--ceeecccc-c--CCCCCcEEEEECCchhhccCCCceeeeccccC
Q 011855 378 ILDPD--G------KLISRRVYRESCIFSDG--TYTKDLTV-L--GVDLAKVAIIDNSPQVFRLQVNNGIPIESWFD 441 (476)
Q Consensus 378 ~LDP~--~------~lF~~RLyRe~C~~~~g--~yiKDLs~-L--GrdlskVVIIDDsp~s~~~q~~NgIpI~~f~g 441 (476)
.++.. + .+|+.++..+....... ...+-+.. + |.+++++++|||++........+|+.+.....
T Consensus 82 ~~~l~~~~~~~~~~~~Fd~iv~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~v~~ 158 (174)
T TIGR01685 82 TFEITYAGKTVPMHSLFDDRIEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCYCPS 158 (174)
T ss_pred hCCcCCCCCcccHHHhceeeeeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEEcCC
Confidence 99865 1 47887777543211110 11122222 2 57889999999999988877788888866643
No 11
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=98.47 E-value=9.2e-08 Score=85.17 Aligned_cols=111 Identities=15% Similarity=0.133 Sum_probs=75.7
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEeccccceEEEeeCchHHHHHHHhh-cccEEEEEcCC-cHHHHHHHHHHHCC
Q 011855 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTAS-QSIYAAQLLDILDP 381 (476)
Q Consensus 304 ~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Ls-k~YEIVIfTAs-~~~YA~~ILd~LDP 381 (476)
+.||+||||||+..-..... .+-. .+ .. .+.||+.++|++++ +.+.++|.|++ .+.++..+++.+.+
T Consensus 1 kli~~DlD~Tl~~~~~~~~~-~~~~----~~-~~-----~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~ 69 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVVG-EDPI----ID-LE-----VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFED 69 (128)
T ss_pred CEEEEeCCCCCCCCCccccc-CCcc----hh-hH-----HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccc
Confidence 37899999999865210000 0000 00 00 57899999999997 57999999999 99999999998762
Q ss_pred ------CCCeeeeEEEcccceeeCCceeecccccC--CCCCcEEEEECCchhh
Q 011855 382 ------DGKLISRRVYRESCIFSDGTYTKDLTVLG--VDLAKVAIIDNSPQVF 426 (476)
Q Consensus 382 ------~~~lF~~RLyRe~C~~~~g~yiKDLs~LG--rdlskVVIIDDsp~s~ 426 (476)
-..+|......+.- .....+.+-+.++| ..++++++|||++...
T Consensus 70 ~~~i~~l~~~f~~~~~~~~~-pkp~~~~~a~~~lg~~~~p~~~l~igDs~~n~ 121 (128)
T TIGR01681 70 FGIIFPLAEYFDPLTIGYWL-PKSPRLVEIALKLNGVLKPKSILFVDDRPDNN 121 (128)
T ss_pred cccchhhHhhhhhhhhcCCC-cHHHHHHHHHHHhcCCCCcceEEEECCCHhHH
Confidence 12245554443221 12234566677789 9999999999999753
No 12
>COG4996 Predicted phosphatase [General function prediction only]
Probab=98.43 E-value=7.5e-07 Score=81.10 Aligned_cols=140 Identities=16% Similarity=0.092 Sum_probs=98.4
Q ss_pred EEEEecCcccccccccccCCCCceEEEEe---cc--ccceEEEeeCchHHHHHHHhh-cccEEEEEcCCcHHHHHHHHHH
Q 011855 305 TLVLDLDETLVHSTLEYCDDADFTFTVFF---NM--KEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDI 378 (476)
Q Consensus 305 tLVLDLDeTLVhSs~~~~~~~df~~~v~~---~~--~~~~~~V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~~ILd~ 378 (476)
.+|||+|+||... .+...+.-|... +. ...+.-|.+||++.+||+++. ..|-+..+|.....-|-++|.+
T Consensus 2 ~i~~d~d~t~wdh----h~iSsl~pPf~rVs~n~i~Ds~G~ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLra 77 (164)
T COG4996 2 AIVFDADKTLWDH----HNISSLEPPFRRVSSNTIEDSKGREVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRA 77 (164)
T ss_pred cEEEeCCCccccc----ccchhcCCcceecCccceecCCCeEEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHH
Confidence 5799999999543 332222111111 11 123567999999999999999 5799999999999999999999
Q ss_pred HCCCCCeeeeEEEcccceeeCCceeeccccc------CCCCCcEEEEECCchhh---ccCCCceeeeccccCCCCchHHH
Q 011855 379 LDPDGKLISRRVYRESCIFSDGTYTKDLTVL------GVDLAKVAIIDNSPQVF---RLQVNNGIPIESWFDDPSDCSLI 449 (476)
Q Consensus 379 LDP~~~lF~~RLyRe~C~~~~g~yiKDLs~L------GrdlskVVIIDDsp~s~---~~q~~NgIpI~~f~gd~~D~eLl 449 (476)
||... ||.+.....|.. ...+..+-|+.+ ...++++|.+||+...+ +....|.=.++.|.+-+.=.+..
T Consensus 78 l~~~~-yFhy~ViePhP~-K~~ML~~llr~i~~er~~~ikP~~Ivy~DDR~iH~~~Iwe~~G~V~~~~~~~Di~c~~ei~ 155 (164)
T COG4996 78 LDLLQ-YFHYIVIEPHPY-KFLMLSQLLREINTERNQKIKPSEIVYLDDRRIHFGNIWEYLGNVKCLEMWKDISCYSEIF 155 (164)
T ss_pred hchhh-hEEEEEecCCCh-hHHHHHHHHHHHHHhhccccCcceEEEEecccccHHHHHHhcCCeeeeEeecchHHHHHHH
Confidence 99986 998888877652 112222333332 34788999999999776 44677888889998764434433
Q ss_pred H
Q 011855 450 S 450 (476)
Q Consensus 450 ~ 450 (476)
.
T Consensus 156 s 156 (164)
T COG4996 156 S 156 (164)
T ss_pred H
Confidence 3
No 13
>COG5190 FCP1 TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=98.29 E-value=4.1e-07 Score=95.53 Aligned_cols=136 Identities=30% Similarity=0.461 Sum_probs=102.2
Q ss_pred CCCceEEEEecCcccccccccccCC----------CCceEEEEeccccceEEEeeCchHHHHHHHhhcccEEEEEcCCcH
Q 011855 300 GRKSVTLVLDLDETLVHSTLEYCDD----------ADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQS 369 (476)
Q Consensus 300 ~~kk~tLVLDLDeTLVhSs~~~~~~----------~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Lsk~YEIVIfTAs~~ 369 (476)
..++..||.|+|.|.+|+...+... ..+.....+......++++.||++..|+...++.||+.+||.+.+
T Consensus 23 q~~~~~l~~~~~~~~~h~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~l~~~~~~i~~~~e~~~~~~~~~ 102 (390)
T COG5190 23 QDKKLILVVDLDQTIIHTTVDPNDPNNVNQSLERTLKSVNDRDPVQEKCAYYVKARPKLFPFLTKISPLYELHIYTMGTR 102 (390)
T ss_pred cCcccccccccccceecccccCCCCCchhhhhhccccchhccccccccccceeeecccccchhhhhchhcceeeEeeccc
Confidence 4567789999999999998665110 011111112223456789999999999999999999999999999
Q ss_pred HHHHHHHHHHCCCCCeeeeEEEcccceeeCCceeeccccc-CCCCCcEEEEECCchhh---ccCCCceeeecc
Q 011855 370 IYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVL-GVDLAKVAIIDNSPQVF---RLQVNNGIPIES 438 (476)
Q Consensus 370 ~YA~~ILd~LDP~~~lF~~RLyRe~C~~~~g~yiKDLs~L-GrdlskVVIIDDsp~s~---~~q~~NgIpI~~ 438 (476)
.||+.+.+++||.|++|..+....+ ...+.-.|-++++ ..+...++++||++..| ... .|.++..+
T Consensus 103 ~~~~~~~~i~d~~g~~~~d~~~~~~--~~~~~~~~s~~~l~p~~~n~~vi~~d~~~~~~~~d~~-~~~v~~~~ 172 (390)
T COG5190 103 AYAERIAKIIDPTGKLFNDRILSRD--ESGSLSQKSLSRLFPKDQNMVVIIDDRGDVWGVGDMN-SNFVAKSP 172 (390)
T ss_pred cchhhhhhccccccccccccccccc--ccccchhhhhhhcCccccccccccccccccCCccchh-hhhhcccc
Confidence 9999999999999999987776333 2344456777766 67888999999999999 333 35666666
No 14
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=98.22 E-value=2.1e-07 Score=88.18 Aligned_cols=96 Identities=13% Similarity=0.126 Sum_probs=79.0
Q ss_pred EeeCchHHHHHHHhh-cccEEEEEcCCcHHHHHHHHHHHCCCCCeeeeEEEcccceee---CCceeecccccCCCCCcEE
Q 011855 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFS---DGTYTKDLTVLGVDLAKVA 417 (476)
Q Consensus 342 V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~~ILd~LDP~~~lF~~RLyRe~C~~~---~g~yiKDLs~LGrdlskVV 417 (476)
+.+.||+.++|++|. +.+.++|.|++.+.++..+++.++-.. +|+..+..+.+... ...+.+-++.+|.++++++
T Consensus 81 ~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~-~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~ 159 (214)
T PRK13288 81 VTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDE-FFDVVITLDDVEHAKPDPEPVLKALELLGAKPEEAL 159 (214)
T ss_pred cccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChh-ceeEEEecCcCCCCCCCcHHHHHHHHHcCCCHHHEE
Confidence 668899999999998 579999999999999999999998775 89888887665432 2356677778899999999
Q ss_pred EEECCchhhccCCCceeeecc
Q 011855 418 IIDNSPQVFRLQVNNGIPIES 438 (476)
Q Consensus 418 IIDDsp~s~~~q~~NgIpI~~ 438 (476)
+|+|++.-+.....+|++...
T Consensus 160 ~iGDs~~Di~aa~~aG~~~i~ 180 (214)
T PRK13288 160 MVGDNHHDILAGKNAGTKTAG 180 (214)
T ss_pred EECCCHHHHHHHHHCCCeEEE
Confidence 999999877666667776543
No 15
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=98.21 E-value=8.2e-07 Score=74.96 Aligned_cols=107 Identities=21% Similarity=0.280 Sum_probs=73.6
Q ss_pred EEEEecCcccccccccccCCCCceEEEEeccccceEEEeeCchHHHHHHHhhcc-cEEEEEcCCcHHHHHHHHHHHCCCC
Q 011855 305 TLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEM-FEVVIFTASQSIYAAQLLDILDPDG 383 (476)
Q Consensus 305 tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Lsk~-YEIVIfTAs~~~YA~~ILd~LDP~~ 383 (476)
++|||+||||+........ ...+..+|++.++|+++.+. +.++|.|++.+.++..+++.+....
T Consensus 1 ~~vfD~D~tl~~~~~~~~~---------------~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~ 65 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIAE---------------IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDD 65 (139)
T ss_pred CeEEccCCceEccCccccc---------------cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCch
Confidence 4799999999876421100 22367899999999999964 9999999999999999999986543
Q ss_pred CeeeeEEEcccceee----------------C---CceeecccccCCCCCcEEEEECCchhhc
Q 011855 384 KLISRRVYRESCIFS----------------D---GTYTKDLTVLGVDLAKVAIIDNSPQVFR 427 (476)
Q Consensus 384 ~lF~~RLyRe~C~~~----------------~---g~yiKDLs~LGrdlskVVIIDDsp~s~~ 427 (476)
++..++..+..... . ..+.+-+..++.+++.+++|+|++.-..
T Consensus 66 -~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~ 127 (139)
T cd01427 66 -YFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPDKLLAALKLLGVDPEEVLMVGDSLNDIE 127 (139)
T ss_pred -hhhheeccchhhhhcccccccccccccccCCCCHHHHHHHHHHcCCChhhEEEeCCCHHHHH
Confidence 34444443322111 1 1122333455677899999999996543
No 16
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=98.18 E-value=1.6e-06 Score=76.19 Aligned_cols=114 Identities=20% Similarity=0.205 Sum_probs=77.5
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEeccccceEEEeeCchHHHHHHHhh-cccEEEEEcCCc--------HHHHHH
Q 011855 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQ--------SIYAAQ 374 (476)
Q Consensus 304 ~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Ls-k~YEIVIfTAs~--------~~YA~~ 374 (476)
+.|+||+||||++.... . .........|++.++|++|. +.+.++|.|++. ..++..
T Consensus 1 k~~~~D~dgtL~~~~~~--~-------------~~~~~~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~ 65 (132)
T TIGR01662 1 KGVVLDLDGTLTDDVPY--V-------------DDEDERILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVAR 65 (132)
T ss_pred CEEEEeCCCceecCCCC--C-------------CCHHHheeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHH
Confidence 37899999999963100 0 00112467899999999997 569999999999 888999
Q ss_pred HHHHHCCCCCeeeeEEEcccce-eeCCceeeccccc-CCCCCcEEEEEC-CchhhccCCCceee
Q 011855 375 LLDILDPDGKLISRRVYRESCI-FSDGTYTKDLTVL-GVDLAKVAIIDN-SPQVFRLQVNNGIP 435 (476)
Q Consensus 375 ILd~LDP~~~lF~~RLyRe~C~-~~~g~yiKDLs~L-GrdlskVVIIDD-sp~s~~~q~~NgIp 435 (476)
+++.+... +...++..... .....|.+-++.+ +.+++++++|+| ...-......+|+.
T Consensus 66 ~l~~~~l~---~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~ 126 (132)
T TIGR01662 66 RLEELGVP---IDVLYACPHCRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLA 126 (132)
T ss_pred HHHHCCCC---EEEEEECCCCCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCe
Confidence 99998764 22223332111 1123556667788 599999999999 56655444445544
No 17
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=98.15 E-value=1.4e-06 Score=84.35 Aligned_cols=93 Identities=15% Similarity=0.164 Sum_probs=76.1
Q ss_pred EeeCchHHHHHHHhhc-ccEEEEEcCCcHHHHHHHHHHHCCCCCeeeeEEEcccceeeC---CceeecccccCCCCCcEE
Q 011855 342 VKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKVA 417 (476)
Q Consensus 342 V~lRPgl~eFLe~Lsk-~YEIVIfTAs~~~YA~~ILd~LDP~~~lF~~RLyRe~C~~~~---g~yiKDLs~LGrdlskVV 417 (476)
+...||+.++|+.+.+ .+.++|-|++.+.++...++.++-.. +|+..+..+.....+ ..|.+-++++|.++++++
T Consensus 92 ~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~-~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l 170 (224)
T PRK14988 92 AVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDA-HLDLLLSTHTFGYPKEDQRLWQAVAEHTGLKAERTL 170 (224)
T ss_pred CCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHH-HCCEEEEeeeCCCCCCCHHHHHHHHHHcCCChHHEE
Confidence 5678999999999985 69999999999999999999887654 788888765543222 246677788999999999
Q ss_pred EEECCchhhccCCCceee
Q 011855 418 IIDNSPQVFRLQVNNGIP 435 (476)
Q Consensus 418 IIDDsp~s~~~q~~NgIp 435 (476)
+|+|++........+|+.
T Consensus 171 ~igDs~~di~aA~~aG~~ 188 (224)
T PRK14988 171 FIDDSEPILDAAAQFGIR 188 (224)
T ss_pred EEcCCHHHHHHHHHcCCe
Confidence 999999877776777885
No 18
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=98.10 E-value=9.1e-07 Score=88.73 Aligned_cols=95 Identities=11% Similarity=0.078 Sum_probs=71.4
Q ss_pred EeeCchHHHHHHHhh-cccEEEEEcCCcHHHHHHHHHHHCCCCCeeeeEEEcccceeeCCceeecccccCCCCCcEEEEE
Q 011855 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIID 420 (476)
Q Consensus 342 V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~~ILd~LDP~~~lF~~RLyRe~C~~~~g~yiKDLs~LGrdlskVVIID 420 (476)
+...||+.++|++|. +.+.++|.|++.+.++..+++.++... +|+..+..+........+.+-+.+++.+++++++|+
T Consensus 141 ~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~-~F~~vi~~~~~~~k~~~~~~~l~~~~~~p~~~l~IG 219 (273)
T PRK13225 141 LQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRS-LFSVVQAGTPILSKRRALSQLVAREGWQPAAVMYVG 219 (273)
T ss_pred CCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChh-heEEEEecCCCCCCHHHHHHHHHHhCcChhHEEEEC
Confidence 566899999999998 569999999999999999999998765 787665543321112233444556788899999999
Q ss_pred CCchhhccCCCceeeec
Q 011855 421 NSPQVFRLQVNNGIPIE 437 (476)
Q Consensus 421 Dsp~s~~~q~~NgIpI~ 437 (476)
|++.-.......|+...
T Consensus 220 Ds~~Di~aA~~AG~~~I 236 (273)
T PRK13225 220 DETRDVEAARQVGLIAV 236 (273)
T ss_pred CCHHHHHHHHHCCCeEE
Confidence 99976655555666653
No 19
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=98.05 E-value=1.1e-05 Score=82.13 Aligned_cols=123 Identities=14% Similarity=0.152 Sum_probs=84.9
Q ss_pred CCCceEEEEecCcccccccccccCCCCceEEEEeccccceEEEeeC-chHHHHHHHhhc-ccEEEEEcCCcHHHHHHHHH
Q 011855 300 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQR-PHLKTFLERVAE-MFEVVIFTASQSIYAAQLLD 377 (476)
Q Consensus 300 ~~kk~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lR-Pgl~eFLe~Lsk-~YEIVIfTAs~~~YA~~ILd 377 (476)
...+..+||||||||+.... -|.+| ||+.++|++|.+ .+.++|||++.+.++..+++
T Consensus 123 ~~~~kvIvFDLDgTLi~~~~---------------------~v~irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~ 181 (301)
T TIGR01684 123 FEPPHVVVFDLDSTLITDEE---------------------PVRIRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMR 181 (301)
T ss_pred cccceEEEEecCCCCcCCCC---------------------ccccCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHH
Confidence 45567999999999986521 26689 999999999996 58999999999999999999
Q ss_pred HHCCCCCeeeeEEEcccceee----------------CCceeecc-----------------cccCCCC-CcEEEEECCc
Q 011855 378 ILDPDGKLISRRVYRESCIFS----------------DGTYTKDL-----------------TVLGVDL-AKVAIIDNSP 423 (476)
Q Consensus 378 ~LDP~~~lF~~RLyRe~C~~~----------------~g~yiKDL-----------------s~LGrdl-skVVIIDDsp 423 (476)
.++..+ +|...+..++.... ...+..|. ++.|..- +-+.+|||-+
T Consensus 182 ~lGLd~-YFdvIIs~Gdv~~~kp~~e~~d~~~~~~~~~~~f~~d~~~~~~lPKSprvvl~yL~~~gvn~~KtitLVDDl~ 260 (301)
T TIGR01684 182 KVKLDR-YFDIIISGGHKAEEYSTMSTEDRQYRYVFTKTPFYLNTTDGKRLPKSPRVVLWYLYDLGVNYFKSITLVDDLA 260 (301)
T ss_pred HcCCCc-ccCEEEECCccccCCCCccccccccceEEecCCeEEeCCCCCcCCCCCeehHHHHHHcCCceeeeEEEeccCc
Confidence 999886 78776664443221 12233333 2234443 3467899988
Q ss_pred hhhccCCCceeeeccccCCCCc
Q 011855 424 QVFRLQVNNGIPIESWFDDPSD 445 (476)
Q Consensus 424 ~s~~~q~~NgIpI~~f~gd~~D 445 (476)
.. .+.-+|-+.++..-...+|
T Consensus 261 ~N-n~~YD~fv~v~rcp~P~~D 281 (301)
T TIGR01684 261 DN-NFNYDYFVNVSRCPVPVND 281 (301)
T ss_pred cc-CccceeEEEeeeCCCCchH
Confidence 53 2344666766665543333
No 20
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=98.04 E-value=2e-05 Score=80.46 Aligned_cols=123 Identities=16% Similarity=0.189 Sum_probs=87.7
Q ss_pred CCCceEEEEecCcccccccccccCCCCceEEEEeccccceEEEeeC-chHHHHHHHhhc-ccEEEEEcCCcHHHHHHHHH
Q 011855 300 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQR-PHLKTFLERVAE-MFEVVIFTASQSIYAAQLLD 377 (476)
Q Consensus 300 ~~kk~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lR-Pgl~eFLe~Lsk-~YEIVIfTAs~~~YA~~ILd 377 (476)
.+.++.+|+||||||+.... -|.+| |++.++|++|++ ++.++|+|++.++++..+++
T Consensus 125 ~~~~~~i~~D~D~TL~~~~~---------------------~v~irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le 183 (303)
T PHA03398 125 WEIPHVIVFDLDSTLITDEE---------------------PVRIRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLK 183 (303)
T ss_pred eeeccEEEEecCCCccCCCC---------------------ccccCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHH
Confidence 35667999999999986631 26779 999999999995 69999999999999999999
Q ss_pred HHCCCCCeeeeEEEcccceeeC----------------Cceeeccc-----------------ccCCCC-CcEEEEECCc
Q 011855 378 ILDPDGKLISRRVYRESCIFSD----------------GTYTKDLT-----------------VLGVDL-AKVAIIDNSP 423 (476)
Q Consensus 378 ~LDP~~~lF~~RLyRe~C~~~~----------------g~yiKDLs-----------------~LGrdl-skVVIIDDsp 423 (476)
.++..+ +|...+..++..... ..+..|.. +.|..- +-+.+|||-+
T Consensus 184 ~lgL~~-yFDvII~~g~i~~k~~~~~~~d~~~~~~~~~~~f~~d~~~~~~lPKSprvVl~yL~~~gvn~~KtiTLVDDl~ 262 (303)
T PHA03398 184 ETKLEG-YFDIIICGGRKAGEYSRRVIVDNKYKMVFVKKPFYLDVTDVKNLPKSPRVVLWYLRKKGVNYFKTITLVDDLK 262 (303)
T ss_pred HcCCCc-cccEEEECCCcccccccceeecccceeEEecCceeEeCCcccCCCCCCeehHHHHHHcCcceeccEEEeccCc
Confidence 999875 777666655433221 22333333 224443 3456888877
Q ss_pred hhhccCCCceeeeccccCCCCc
Q 011855 424 QVFRLQVNNGIPIESWFDDPSD 445 (476)
Q Consensus 424 ~s~~~q~~NgIpI~~f~gd~~D 445 (476)
.. ...-+|-+.++..-...+|
T Consensus 263 ~N-n~~YD~fv~v~rcp~P~~D 283 (303)
T PHA03398 263 SN-NYSYDYFVNVKRCPEPVND 283 (303)
T ss_pred cc-CccceeEEEeeeCCCCcHH
Confidence 54 4567788888877654444
No 21
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.02 E-value=1.5e-06 Score=82.29 Aligned_cols=94 Identities=14% Similarity=0.219 Sum_probs=68.5
Q ss_pred EeeCchHHHHHHHhhc-ccEEEEEcCCcHHHHHHHHHHHCCCCCeeeeEEEccccee-------------eCCceeeccc
Q 011855 342 VKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIF-------------SDGTYTKDLT 407 (476)
Q Consensus 342 V~lRPgl~eFLe~Lsk-~YEIVIfTAs~~~YA~~ILd~LDP~~~lF~~RLyRe~C~~-------------~~g~yiKDLs 407 (476)
+..+||+.+||+.+.+ .+.++|.|++...++..+++.++-.. +|...+.-++..+ ....+.+-++
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 162 (219)
T TIGR00338 84 LPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDA-AFANRLEVEDGKLTGLVEGPIVDASYKGKTLLILLR 162 (219)
T ss_pred CCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCc-eEeeEEEEECCEEEEEecCcccCCcccHHHHHHHHH
Confidence 5689999999999995 69999999999999999999987765 6655443221110 0112333445
Q ss_pred ccCCCCCcEEEEECCchhhccCCCceeee
Q 011855 408 VLGVDLAKVAIIDNSPQVFRLQVNNGIPI 436 (476)
Q Consensus 408 ~LGrdlskVVIIDDsp~s~~~q~~NgIpI 436 (476)
++|.+++++++|+|++.-.......|+.+
T Consensus 163 ~~~~~~~~~i~iGDs~~Di~aa~~ag~~i 191 (219)
T TIGR00338 163 KEGISPENTVAVGDGANDLSMIKAAGLGI 191 (219)
T ss_pred HcCCCHHHEEEEECCHHHHHHHHhCCCeE
Confidence 67889999999999987665544556665
No 22
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=98.01 E-value=1.4e-05 Score=75.55 Aligned_cols=118 Identities=14% Similarity=0.152 Sum_probs=63.6
Q ss_pred ceEEEEecCcccccccccccCCCCceEEEEeccc------cceEEEeeCchHHHHHHHhh-cccEEEEEcC-CcHHHHHH
Q 011855 303 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMK------EHTVYVKQRPHLKTFLERVA-EMFEVVIFTA-SQSIYAAQ 374 (476)
Q Consensus 303 k~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~------~~~~~V~lRPgl~eFLe~Ls-k~YEIVIfTA-s~~~YA~~ 374 (476)
++++|||||.||...-... ....|+..... ..+.-|.+-|++.+.|+.|. +..+|++.|. ..++.|.+
T Consensus 3 PklvvFDLD~TlW~~~~~~----~~~~Pf~~~~~~~~v~D~~g~~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~ 78 (169)
T PF12689_consen 3 PKLVVFDLDYTLWPPWMDT----HVGPPFKKISNGNVVVDSRGEEVSLYPDVPEILQELKERGVKLAVASRTDEPDWARE 78 (169)
T ss_dssp -SEEEE-STTTSSSS-TTT----SS-S-EEE-TTS--EEETT--EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHH
T ss_pred CcEEEEcCcCCCCchhHhh----ccCCCceecCCCCEEEeCCCCEEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHH
Confidence 5689999999996543221 12222222222 24556999999999999999 5799999995 56889999
Q ss_pred HHHHHCCC---------CCeeeeEEEcccceeeCCceeecccccCCCCCcEEEEECCchhh
Q 011855 375 LLDILDPD---------GKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVF 426 (476)
Q Consensus 375 ILd~LDP~---------~~lF~~RLyRe~C~~~~g~yiKDLs~LGrdlskVVIIDDsp~s~ 426 (476)
+|+.|... ..+|.+.-.-.++ ...++.+-.+..|.+.+.++++||.....
T Consensus 79 ~L~~l~i~~~~~~~~~~~~~F~~~eI~~gs--K~~Hf~~i~~~tgI~y~eMlFFDDe~~N~ 137 (169)
T PF12689_consen 79 LLKLLEIDDADGDGVPLIEYFDYLEIYPGS--KTTHFRRIHRKTGIPYEEMLFFDDESRNI 137 (169)
T ss_dssp HHHHTT-C----------CCECEEEESSS---HHHHHHHHHHHH---GGGEEEEES-HHHH
T ss_pred HHHhcCCCccccccccchhhcchhheecCc--hHHHHHHHHHhcCCChhHEEEecCchhcc
Confidence 99999876 1244432221110 01122222235699999999999998765
No 23
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=97.90 E-value=1.3e-05 Score=74.50 Aligned_cols=115 Identities=15% Similarity=0.172 Sum_probs=76.4
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEeccccceEEEeeCchHHHHHHHhh-cccEEEEEcCCcH-------------
Q 011855 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQS------------- 369 (476)
Q Consensus 304 ~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~------------- 369 (476)
+.|+||+||||+-.. .|. ...--+.+.||+.++|++|. +.|.++|.|++..
T Consensus 2 ~~~~~D~Dgtl~~~~-------~~~--------~~~~~~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~ 66 (176)
T TIGR00213 2 KAIFLDRDGTINIDH-------GYV--------HEIDNFEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQ 66 (176)
T ss_pred CEEEEeCCCCEeCCC-------CCC--------CCHHHeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHH
Confidence 578999999998311 110 01112556799999999998 5699999999885
Q ss_pred --HHHHHHHHHHCCCCCeeeeEEEcc-----------cceee---CCceeecccccCCCCCcEEEEECCchhhccCCCce
Q 011855 370 --IYAAQLLDILDPDGKLISRRVYRE-----------SCIFS---DGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNG 433 (476)
Q Consensus 370 --~YA~~ILd~LDP~~~lF~~RLyRe-----------~C~~~---~g~yiKDLs~LGrdlskVVIIDDsp~s~~~q~~Ng 433 (476)
.|...++..+... |...++.. .|... .+.|.+-++++|.+++++++|+|++.-......+|
T Consensus 67 ~~~~~~~~l~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG 143 (176)
T TIGR00213 67 LTEWMDWSLAERDVD---LDGIYYCPHHPEGVEEFRQVCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAK 143 (176)
T ss_pred HHHHHHHHHHHcCCC---ccEEEECCCCCcccccccCCCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCC
Confidence 3444455544332 44444432 22211 23456667888999999999999998776666677
Q ss_pred eee
Q 011855 434 IPI 436 (476)
Q Consensus 434 IpI 436 (476)
+..
T Consensus 144 ~~~ 146 (176)
T TIGR00213 144 VKT 146 (176)
T ss_pred CcE
Confidence 654
No 24
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=97.90 E-value=1.4e-05 Score=72.29 Aligned_cols=117 Identities=20% Similarity=0.248 Sum_probs=77.1
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEeccccceEEEeeCchHHHHHHHhh-cccEEEEEcCCcH-------------
Q 011855 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQS------------- 369 (476)
Q Consensus 304 ~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~------------- 369 (476)
++|+||+||||+........ .....+...||+.++|++|. +.|.++|.|++.+
T Consensus 1 ~~~~~d~dgtl~~~~~~~~~-------------~~~~~~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~ 67 (147)
T TIGR01656 1 PALFLDRDGVINEDTVSDYP-------------RSLDDWQLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRA 67 (147)
T ss_pred CeEEEeCCCceeccCCcccC-------------CCHHHeEEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHH
Confidence 37899999999986532100 00112467899999999997 6799999999874
Q ss_pred --HHHHHHHHHHCCCCCeeeeEEEc-----cc--ce-eeCCceeecccccCCCCCcEEEEECCchhhccCCCceeee
Q 011855 370 --IYAAQLLDILDPDGKLISRRVYR-----ES--CI-FSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPI 436 (476)
Q Consensus 370 --~YA~~ILd~LDP~~~lF~~RLyR-----e~--C~-~~~g~yiKDLs~LGrdlskVVIIDDsp~s~~~q~~NgIpI 436 (476)
.++..+++.++.. +...++. +. +. .....+.+-+..+|.+++++++|.|++.-.......||..
T Consensus 68 ~~~~~~~~l~~~~l~---~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~ 141 (147)
T TIGR01656 68 PNGRVLELLRQLGVA---VDGVLFCPHHPADNCSCRKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAA 141 (147)
T ss_pred HHHHHHHHHHhCCCc---eeEEEECCCCCCCCCCCCCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCE
Confidence 5667777777653 2222222 11 11 1123445556778999999999999987665555555543
No 25
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=97.88 E-value=1.8e-05 Score=80.70 Aligned_cols=108 Identities=17% Similarity=0.125 Sum_probs=75.2
Q ss_pred ceEEEEecCcccccccccccCCCCceEEEEeccccceE-EEeeCchHHHHHHHhh-cccEEEEEcCCcHHHHHHHHHH--
Q 011855 303 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTV-YVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDI-- 378 (476)
Q Consensus 303 k~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~-~V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~~ILd~-- 378 (476)
+++||+|||+||+........ ..++ +....|++.++|+.|. +.+.+.|.|...+..|..+++.
T Consensus 3 ~k~~v~DlDnTlw~gv~~e~g-------------~~~i~~~~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~ 69 (320)
T TIGR01686 3 LKVLVLDLDNTLWGGVLGEDG-------------IDNLNLSPLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRK 69 (320)
T ss_pred eEEEEEcCCCCCCCCEEccCC-------------ccccccCccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCc
Confidence 579999999999754311100 0111 1224789999999998 6799999999999999999998
Q ss_pred --HCCCCCeeeeEEEcccceeeCCceeecccccCCCCCcEEEEECCchhh
Q 011855 379 --LDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVF 426 (476)
Q Consensus 379 --LDP~~~lF~~RLyRe~C~~~~g~yiKDLs~LGrdlskVVIIDDsp~s~ 426 (476)
+.... +|...... .......+.+-+..+|.+++.+|+|||++...
T Consensus 70 ~~~~~~~-~f~~~~~~--~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~ 116 (320)
T TIGR01686 70 DFILQAE-DFDARSIN--WGPKSESLRKIAKKLNLGTDSFLFIDDNPAER 116 (320)
T ss_pred cccCcHH-HeeEEEEe--cCchHHHHHHHHHHhCCCcCcEEEECCCHHHH
Confidence 55443 55544221 11112344556677899999999999999655
No 26
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=97.88 E-value=2.6e-06 Score=82.55 Aligned_cols=99 Identities=17% Similarity=0.209 Sum_probs=84.8
Q ss_pred EeeCchHHHHHHHhhcc-cEEEEEcCCcHHHHHHHHHHHCCCCCeeeeEEEcccceee---CCceeecccccCCCCCcEE
Q 011855 342 VKQRPHLKTFLERVAEM-FEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFS---DGTYTKDLTVLGVDLAKVA 417 (476)
Q Consensus 342 V~lRPgl~eFLe~Lsk~-YEIVIfTAs~~~YA~~ILd~LDP~~~lF~~RLyRe~C~~~---~g~yiKDLs~LGrdlskVV 417 (476)
+...||+.+||+.|.+. .-+++-|++.+..+..+++.+...+ +|..++++++.... +..|.+-..+||.+++++|
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~-~f~~~v~~~dv~~~KP~Pd~yL~Aa~~Lgv~P~~Cv 163 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLD-YFDVIVTADDVARGKPAPDIYLLAAERLGVDPEECV 163 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChh-hcchhccHHHHhcCCCCCHHHHHHHHHcCCChHHeE
Confidence 78999999999999966 9999999999999999999999876 89999998776544 3468889999999999999
Q ss_pred EEECCchhhccCCCceeeeccccC
Q 011855 418 IIDNSPQVFRLQVNNGIPIESWFD 441 (476)
Q Consensus 418 IIDDsp~s~~~q~~NgIpI~~f~g 441 (476)
+|+|++.-......-|+.+-.+.+
T Consensus 164 viEDs~~Gi~Aa~aAGm~vv~v~~ 187 (221)
T COG0637 164 VVEDSPAGIQAAKAAGMRVVGVPA 187 (221)
T ss_pred EEecchhHHHHHHHCCCEEEEecC
Confidence 999999877666666777666665
No 27
>PHA02597 30.2 hypothetical protein; Provisional
Probab=97.84 E-value=2.6e-06 Score=79.77 Aligned_cols=96 Identities=13% Similarity=0.113 Sum_probs=67.8
Q ss_pred EeeCchHHHHHHHhhcccEEEEEcCCcHHHHHHHHHHHCCCC---CeeeeEEEcccceeeCCceeecccccCCCCCcEEE
Q 011855 342 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDG---KLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAI 418 (476)
Q Consensus 342 V~lRPgl~eFLe~Lsk~YEIVIfTAs~~~YA~~ILd~LDP~~---~lF~~RLyRe~C~~~~g~yiKDLs~LGrdlskVVI 418 (476)
+...||+.++|++|.+.+.+++-|++.......+++.+...+ .+|+..+..+........+.+-++++| ++.+|+
T Consensus 73 ~~~~pG~~e~L~~L~~~~~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~~~~kp~~~~~a~~~~~--~~~~v~ 150 (197)
T PHA02597 73 LSAYDDALDVINKLKEDYDFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCGHDESKEKLFIKAKEKYG--DRVVCF 150 (197)
T ss_pred ccCCCCHHHHHHHHHhcCCEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEeccCcccHHHHHHHHHHhC--CCcEEE
Confidence 668999999999999878887777776665555666654332 245666665554323334555667778 678999
Q ss_pred EECCchhhccCCCc--eeeeccc
Q 011855 419 IDNSPQVFRLQVNN--GIPIESW 439 (476)
Q Consensus 419 IDDsp~s~~~q~~N--gIpI~~f 439 (476)
|||++........+ ||+..-+
T Consensus 151 vgDs~~di~aA~~a~~Gi~~i~~ 173 (197)
T PHA02597 151 VDDLAHNLDAAHEALSQLPVIHM 173 (197)
T ss_pred eCCCHHHHHHHHHHHcCCcEEEe
Confidence 99999988777777 8876655
No 28
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=97.83 E-value=2.2e-05 Score=73.07 Aligned_cols=123 Identities=16% Similarity=0.151 Sum_probs=86.0
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEeccccceEEEeeCchHHHHHHHhh-cccEEEEEcCC---------------
Q 011855 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTAS--------------- 367 (476)
Q Consensus 304 ~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Ls-k~YEIVIfTAs--------------- 367 (476)
+.|+||.||||++.... .| . ....-.++.-||+.++|++|. +.|.++|.|+.
T Consensus 2 ~~~~~d~dg~l~~~~~~-----~~--~-----~~~~~~~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~ 69 (161)
T TIGR01261 2 KILFIDRDGTLIEEPPS-----DF--Q-----VDALEKLRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDG 69 (161)
T ss_pred CEEEEeCCCCccccCCC-----cc--c-----cCCHHHeeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHH
Confidence 58999999999884311 00 0 001113677899999999998 47999999996
Q ss_pred cHHHHHHHHHHHCCCCCeeeeEEEc-----ccceeeC---CceeecccccCCCCCcEEEEECCchhhccCCCceeeeccc
Q 011855 368 QSIYAAQLLDILDPDGKLISRRVYR-----ESCIFSD---GTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIESW 439 (476)
Q Consensus 368 ~~~YA~~ILd~LDP~~~lF~~RLyR-----e~C~~~~---g~yiKDLs~LGrdlskVVIIDDsp~s~~~q~~NgIpI~~f 439 (476)
...++..+++.++.. |...++. +.+.... +.+..-++.+|.+++++++|.|+..-......+|+..-.+
T Consensus 70 ~~~~~~~~l~~~gl~---fd~ii~~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~~ 146 (161)
T TIGR01261 70 PHNLMLQIFRSQGII---FDDVLICPHFPDDNCDCRKPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQY 146 (161)
T ss_pred HHHHHHHHHHHCCCc---eeEEEECCCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEEE
Confidence 366888888888874 7666653 4443322 2344455667889999999999987666666778776655
Q ss_pred cC
Q 011855 440 FD 441 (476)
Q Consensus 440 ~g 441 (476)
..
T Consensus 147 ~~ 148 (161)
T TIGR01261 147 DE 148 (161)
T ss_pred Ch
Confidence 43
No 29
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=97.81 E-value=2.8e-05 Score=72.45 Aligned_cols=116 Identities=15% Similarity=0.098 Sum_probs=76.3
Q ss_pred ceEEEEecCcccccccccccCCCCceEEEEeccccceEEEeeCchHHHHHHHhhc-ccEEEEEcCCcH------------
Q 011855 303 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQS------------ 369 (476)
Q Consensus 303 k~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Lsk-~YEIVIfTAs~~------------ 369 (476)
.+.|+||+||||+-.... +..... .+...||+.++|++|++ .|.++|.|++..
T Consensus 3 ~~~~~~d~~~t~~~~~~~------------~~~~~~--~~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~ 68 (181)
T PRK08942 3 MKAIFLDRDGVINVDSDG------------YVKSPD--EWIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLN 68 (181)
T ss_pred ccEEEEECCCCcccCCcc------------ccCCHH--HeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHH
Confidence 468999999999644210 011111 24578999999999995 599999998863
Q ss_pred ---HHHHHHHHHHCCCCCeeeeEEEcccc-----eee---CCceeecccccCCCCCcEEEEECCchhhccCCCceee
Q 011855 370 ---IYAAQLLDILDPDGKLISRRVYRESC-----IFS---DGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIP 435 (476)
Q Consensus 370 ---~YA~~ILd~LDP~~~lF~~RLyRe~C-----~~~---~g~yiKDLs~LGrdlskVVIIDDsp~s~~~q~~NgIp 435 (476)
.+...+++.++. +|...++...+ ... ...|.+-+..+|.+++++++|.|++.-.......|+.
T Consensus 69 ~~~~~~~~~l~~~g~---~f~~i~~~~~~~~~~~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~ 142 (181)
T PRK08942 69 ALHEKMDWSLADRGG---RLDGIYYCPHHPEDGCDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVT 142 (181)
T ss_pred HHHHHHHHHHHHcCC---ccceEEECCCCCCCCCcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCe
Confidence 333444554432 36666654322 111 2345677778899999999999999766555555554
No 30
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=97.78 E-value=1.7e-05 Score=79.15 Aligned_cols=128 Identities=13% Similarity=0.100 Sum_probs=91.9
Q ss_pred CCceEEEEecCcccccccccccCCCCceEEEEeccccceEEEeeCchHHHHHHHhh-cccEEEEEcCCcHHHHHHHHHHH
Q 011855 301 RKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDIL 379 (476)
Q Consensus 301 ~kk~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~~ILd~L 379 (476)
+++..+++|+||||....... ..++. ........|++.++|+++. +.+.++|.|+.....++.+++.|
T Consensus 156 ~~~~~~~~D~dgtl~~~~~~~--~~~~~---------~~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l 224 (300)
T PHA02530 156 GLPKAVIFDIDGTLAKMGGRS--PYDWT---------KVKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWL 224 (300)
T ss_pred CCCCEEEEECCCcCcCCCCCC--ccchh---------hcccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHH
Confidence 455789999999998654211 01110 0112456999999999998 56999999999999999999999
Q ss_pred CCCCCeeeeEEEccc-------ceee---CCceeecccccCC-CCCcEEEEECCchhhccCCCceeeeccc
Q 011855 380 DPDGKLISRRVYRES-------CIFS---DGTYTKDLTVLGV-DLAKVAIIDNSPQVFRLQVNNGIPIESW 439 (476)
Q Consensus 380 DP~~~lF~~RLyRe~-------C~~~---~g~yiKDLs~LGr-dlskVVIIDDsp~s~~~q~~NgIpI~~f 439 (476)
+..+.+|+..+..+. .... ...+.+.|..++. +++.++.|+|++........+||++-..
T Consensus 225 ~~~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i~v 295 (300)
T PHA02530 225 RQTDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLECWQV 295 (300)
T ss_pred HHcCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeEEEe
Confidence 988767776665552 1111 1123455666777 6799999999999888877888886554
No 31
>PLN02940 riboflavin kinase
Probab=97.69 E-value=4.5e-06 Score=87.47 Aligned_cols=96 Identities=10% Similarity=0.091 Sum_probs=76.3
Q ss_pred EeeCchHHHHHHHhh-cccEEEEEcCCcHHHHHHHHH-HHCCCCCeeeeEEEcccceeeC---CceeecccccCCCCCcE
Q 011855 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLD-ILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKV 416 (476)
Q Consensus 342 V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~~ILd-~LDP~~~lF~~RLyRe~C~~~~---g~yiKDLs~LGrdlskV 416 (476)
+...||+.++|++|. +.+.++|-|++.+.++..+++ .++-. .+|+.++..+++.... ..|.+-++.+|..++++
T Consensus 92 ~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~-~~Fd~ii~~d~v~~~KP~p~~~~~a~~~lgv~p~~~ 170 (382)
T PLN02940 92 IKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWK-ESFSVIVGGDEVEKGKPSPDIFLEAAKRLNVEPSNC 170 (382)
T ss_pred CCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChH-hhCCEEEehhhcCCCCCCHHHHHHHHHHcCCChhHE
Confidence 567899999999997 569999999999999999887 55554 4899999888765432 35677788899999999
Q ss_pred EEEECCchhhccCCCceeeecc
Q 011855 417 AIIDNSPQVFRLQVNNGIPIES 438 (476)
Q Consensus 417 VIIDDsp~s~~~q~~NgIpI~~ 438 (476)
|+|+|++.-.......|+....
T Consensus 171 l~VGDs~~Di~aA~~aGi~~I~ 192 (382)
T PLN02940 171 LVIEDSLPGVMAGKAAGMEVIA 192 (382)
T ss_pred EEEeCCHHHHHHHHHcCCEEEE
Confidence 9999999877655556665433
No 32
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=97.59 E-value=6.1e-05 Score=74.60 Aligned_cols=133 Identities=12% Similarity=0.085 Sum_probs=78.3
Q ss_pred CCCceEEEEecCcccccccccc-cCCCCceE---EEEeccccc-------eEEEeeCchHHHHHHHhh-cccEEEEEcCC
Q 011855 300 GRKSVTLVLDLDETLVHSTLEY-CDDADFTF---TVFFNMKEH-------TVYVKQRPHLKTFLERVA-EMFEVVIFTAS 367 (476)
Q Consensus 300 ~~kk~tLVLDLDeTLVhSs~~~-~~~~df~~---~v~~~~~~~-------~~~V~lRPgl~eFLe~Ls-k~YEIVIfTAs 367 (476)
.++++.++|||||||++++..- .....+.. ....+.... .-.....|++.+||+++. +.+.++|.|+.
T Consensus 60 ~~~p~aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~l~~~G~~i~iVTnr 139 (237)
T TIGR01672 60 GRPPIAVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRGDAIFFVTGR 139 (237)
T ss_pred CCCCeEEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHHHHHCCCEEEEEeCC
Confidence 4556799999999999997421 00000000 000000000 112344455999999998 57999999998
Q ss_pred ----cHHHHHHHHHHHCCCCCeeeeEEEcccceeeCCceeecccccCCCCCcEEEEECCchhhccCCCceeeec
Q 011855 368 ----QSIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIE 437 (476)
Q Consensus 368 ----~~~YA~~ILd~LDP~~~lF~~RLyRe~C~~~~g~yiKDLs~LGrdlskVVIIDDsp~s~~~q~~NgIpI~ 437 (476)
.+.+++.+++.+...+ +|...+..+..... .+-|. ..+ .....+|.|-|+..-+.....+||...
T Consensus 140 ~~~k~~~~a~~ll~~lGi~~-~f~~i~~~d~~~~~--Kp~~~-~~l-~~~~i~i~vGDs~~DI~aAk~AGi~~I 208 (237)
T TIGR01672 140 TPGKTDTVSKTLAKNFHIPA-MNPVIFAGDKPGQY--QYTKT-QWI-QDKNIRIHYGDSDNDITAAKEAGARGI 208 (237)
T ss_pred CCCcCHHHHHHHHHHhCCch-heeEEECCCCCCCC--CCCHH-HHH-HhCCCeEEEeCCHHHHHHHHHCCCCEE
Confidence 7789999999998865 67655544432211 11111 112 122337899999877755555666533
No 33
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=97.51 E-value=7.6e-05 Score=66.15 Aligned_cols=94 Identities=18% Similarity=0.316 Sum_probs=77.3
Q ss_pred EEeeCchHHHHHHHhh-cccEEEEEcCCcHHHHHHHHHHHCCCCCeeeeEEEcccceeeC---CceeecccccCCCCCcE
Q 011855 341 YVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKV 416 (476)
Q Consensus 341 ~V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~~ILd~LDP~~~lF~~RLyRe~C~~~~---g~yiKDLs~LGrdlskV 416 (476)
.....|++.++|+.++ +.+.++|.|.+...++..+++.+... .+|+..++.++....+ ..|.+-++.+|.+++++
T Consensus 75 ~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~-~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p~~~ 153 (176)
T PF13419_consen 75 KLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLD-DYFDEIISSDDVGSRKPDPDAYRRALEKLGIPPEEI 153 (176)
T ss_dssp GEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHG-GGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSSGGGE
T ss_pred ccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccc-cccccccccchhhhhhhHHHHHHHHHHHcCCCcceE
Confidence 5889999999999999 88999999999999999999999776 4899888876654432 34667777889999999
Q ss_pred EEEECCchhhccCCCceee
Q 011855 417 AIIDNSPQVFRLQVNNGIP 435 (476)
Q Consensus 417 VIIDDsp~s~~~q~~NgIp 435 (476)
++|||++.........|+.
T Consensus 154 ~~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 154 LFVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp EEEESSHHHHHHHHHTTSE
T ss_pred EEEeCCHHHHHHHHHcCCe
Confidence 9999999766554445544
No 34
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=97.51 E-value=0.00018 Score=67.07 Aligned_cols=107 Identities=18% Similarity=0.258 Sum_probs=68.1
Q ss_pred ceEEEEecCcccccccccccCCCCceEEEEeccccceEEEeeCchHHHHHHHhh-cccEEEEEcCCcHH-----------
Q 011855 303 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSI----------- 370 (476)
Q Consensus 303 k~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~----------- 370 (476)
+++++||+||||+-..... .+ ......| ..+-||+.+.|++|. +.|.++|.|++...
T Consensus 13 ~k~~~~D~Dgtl~~~~~~~----~~------~~~~~~~-~~~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~ 81 (166)
T TIGR01664 13 SKVAAFDLDGTLITTRSGK----VF------PTSASDW-RFLYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFK 81 (166)
T ss_pred CcEEEEeCCCceEecCCCC----cc------cCChHHe-EEecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHH
Confidence 3578999999998643110 00 0011111 224599999999997 78999999998763
Q ss_pred -HHHHHHHHHCCCCCeeeeEEEcccceee---CCceeecccccC--CCCCcEEEEECCc
Q 011855 371 -YAAQLLDILDPDGKLISRRVYRESCIFS---DGTYTKDLTVLG--VDLAKVAIIDNSP 423 (476)
Q Consensus 371 -YA~~ILd~LDP~~~lF~~RLyRe~C~~~---~g~yiKDLs~LG--rdlskVVIIDDsp 423 (476)
++..+++.++.. +...+..+..... .+.+..-+..+| .+++++++|.|++
T Consensus 82 ~~i~~~l~~~gl~---~~~ii~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~ 137 (166)
T TIGR01664 82 NKIEAFLEKLKVP---IQVLAATHAGLYRKPMTGMWEYLQSQYNSPIKMTRSFYVGDAA 137 (166)
T ss_pred HHHHHHHHHcCCC---EEEEEecCCCCCCCCccHHHHHHHHHcCCCCCchhcEEEECCC
Confidence 567778887763 2233332222111 223444456677 8899999999996
No 35
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=97.44 E-value=0.00015 Score=66.37 Aligned_cols=87 Identities=10% Similarity=0.159 Sum_probs=60.5
Q ss_pred EeeCchHHHHHHHhhc-ccEEEEEcCCcHHHHHHHHHHHCCCCCeeeeEEEcccceeeC-----------------Ccee
Q 011855 342 VKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD-----------------GTYT 403 (476)
Q Consensus 342 V~lRPgl~eFLe~Lsk-~YEIVIfTAs~~~YA~~ILd~LDP~~~lF~~RLyRe~C~~~~-----------------g~yi 403 (476)
+.++||+.++|+++.+ .+.++|.|++...+++.+++.++... +|...+..+...-.. ....
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~-~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~ 149 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKD-VFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGCC 149 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChh-heeEEeccCceECCCCcEEEecCCCCccCcCCCCCC
Confidence 7899999999999984 69999999999999999999987654 676666432211000 1112
Q ss_pred e--cccccCCC-CCcEEEEECCchhhccC
Q 011855 404 K--DLTVLGVD-LAKVAIIDNSPQVFRLQ 429 (476)
Q Consensus 404 K--DLs~LGrd-lskVVIIDDsp~s~~~q 429 (476)
| -+..+... ++++|+|+|+..-+...
T Consensus 150 K~~~~~~~~~~~~~~~i~iGD~~~D~~aa 178 (188)
T TIGR01489 150 KGKVIHKLSEPKYQHIIYIGDGVTDVCPA 178 (188)
T ss_pred HHHHHHHHHhhcCceEEEECCCcchhchH
Confidence 3 22333334 78899999998765443
No 36
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=97.37 E-value=0.00015 Score=65.86 Aligned_cols=92 Identities=20% Similarity=0.256 Sum_probs=71.3
Q ss_pred EeeCchHHHHHHHhh-cccEEEEEcCCcHHHHHHHHHHHCCCCCeeeeEEEcccceeeC---CceeecccccCCCCCcEE
Q 011855 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKVA 417 (476)
Q Consensus 342 V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~~ILd~LDP~~~lF~~RLyRe~C~~~~---g~yiKDLs~LGrdlskVV 417 (476)
+..+||+.+||++++ +.+.++|.|++...+ ..++..++..+ +|+..++.+.....+ ..|.+-++++|.++++++
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~-~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~ 161 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRD-LFDVVIFSGDVGRGKPDPDIYLLALKKLGLKPEECL 161 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHH-HCCEEEEcCCCCCCCCCHHHHHHHHHHcCCCcceEE
Confidence 577899999999998 479999999999999 76666677665 788888765544322 346666778899999999
Q ss_pred EEECCchhhccCCCceee
Q 011855 418 IIDNSPQVFRLQVNNGIP 435 (476)
Q Consensus 418 IIDDsp~s~~~q~~NgIp 435 (476)
+|+|++.........|+.
T Consensus 162 ~vgD~~~di~aA~~~G~~ 179 (183)
T TIGR01509 162 FVDDSPAGIEAAKAAGMH 179 (183)
T ss_pred EEcCCHHHHHHHHHcCCE
Confidence 999999766555555554
No 37
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=97.36 E-value=0.00027 Score=65.81 Aligned_cols=109 Identities=17% Similarity=0.130 Sum_probs=75.2
Q ss_pred CCceEEEEecCcccccccccccCCCCceEEEEeccccceEEEeeCchHHHHHHHhhc-ccEEEEEcCCc-HHHHHHHHHH
Q 011855 301 RKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQ-SIYAAQLLDI 378 (476)
Q Consensus 301 ~kk~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Lsk-~YEIVIfTAs~-~~YA~~ILd~ 378 (476)
.+-..||+|+||||..... ....|++.++|++|.+ .+.++|.|++. ...+..+++.
T Consensus 23 ~~v~~vv~D~Dgtl~~~~~----------------------~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~ 80 (170)
T TIGR01668 23 VGIKGVVLDKDNTLVYPDH----------------------NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKA 80 (170)
T ss_pred CCCCEEEEecCCccccCCC----------------------CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHH
Confidence 3456899999999985420 2346999999999985 59999999999 6788888777
Q ss_pred HCCCCCeeeeEEEcccceeeCCceeecccccCCCCCcEEEEECCch-hhccCCCceeeecc
Q 011855 379 LDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQ-VFRLQVNNGIPIES 438 (476)
Q Consensus 379 LDP~~~lF~~RLyRe~C~~~~g~yiKDLs~LGrdlskVVIIDDsp~-s~~~q~~NgIpI~~ 438 (476)
++... ++ .........+.+-++.+|.+++++++|+|+.. -......+|+...-
T Consensus 81 ~gl~~------~~-~~~KP~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~i~ 134 (170)
T TIGR01668 81 LGIPV------LP-HAVKPPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSYTIL 134 (170)
T ss_pred cCCEE------Ec-CCCCCChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCeEEE
Confidence 65421 11 11112233455667788999999999999983 45444445554433
No 38
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=97.34 E-value=5.1e-05 Score=71.10 Aligned_cols=94 Identities=18% Similarity=0.164 Sum_probs=62.1
Q ss_pred EeeCchHHHHHHHhhcccEEEEEcCCcHHHHHHHHHHHCCCCCeeeeEEEc-ccceee-----CC-ceeecccccCCCCC
Q 011855 342 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYR-ESCIFS-----DG-TYTKDLTVLGVDLA 414 (476)
Q Consensus 342 V~lRPgl~eFLe~Lsk~YEIVIfTAs~~~YA~~ILd~LDP~~~lF~~RLyR-e~C~~~-----~g-~yiKDLs~LGrdls 414 (476)
+..+||+.+||+.+.+.+.++|.|++...+++.+++.++... +|..++.- +..... .+ ....-+..++....
T Consensus 67 ~~~~pg~~e~L~~L~~~~~~~IvS~~~~~~~~~~l~~~gl~~-~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~~~~~~ 145 (205)
T PRK13582 67 LDPLPGAVEFLDWLRERFQVVILSDTFYEFAGPLMRQLGWPT-LFCHSLEVDEDGMITGYDLRQPDGKRQAVKALKSLGY 145 (205)
T ss_pred CCCCCCHHHHHHHHHhcCCEEEEeCCcHHHHHHHHHHcCCch-hhcceEEECCCCeEECccccccchHHHHHHHHHHhCC
Confidence 567899999999999669999999999999999999988654 66554432 111000 01 11111223445557
Q ss_pred cEEEEECCchhhccCCCceeee
Q 011855 415 KVAIIDNSPQVFRLQVNNGIPI 436 (476)
Q Consensus 415 kVVIIDDsp~s~~~q~~NgIpI 436 (476)
+++.|-|+..-......+|+.+
T Consensus 146 ~~v~iGDs~~D~~~~~aa~~~v 167 (205)
T PRK13582 146 RVIAAGDSYNDTTMLGEADAGI 167 (205)
T ss_pred eEEEEeCCHHHHHHHHhCCCCE
Confidence 8999999997654433344443
No 39
>PRK06769 hypothetical protein; Validated
Probab=97.32 E-value=0.00017 Score=67.28 Aligned_cols=116 Identities=17% Similarity=0.183 Sum_probs=71.5
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEeccccceEEEeeCchHHHHHHHhh-cccEEEEEcCCcHHH-----HHHHHH
Q 011855 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIY-----AAQLLD 377 (476)
Q Consensus 304 ~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~Y-----A~~ILd 377 (476)
..|+||+||||.- |.. + .+.-.+.+.||+.++|++|. +.|.++|.|++.... ...+..
T Consensus 5 ~~~~~d~d~~~~~--~~~-----~---------~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~ 68 (173)
T PRK06769 5 QAIFIDRDGTIGG--DTT-----I---------HYPGSFTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQ 68 (173)
T ss_pred cEEEEeCCCcccC--CCC-----C---------CCHHHeEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHH
Confidence 4789999999941 100 0 00012456899999999998 579999999976421 112333
Q ss_pred HHCCCCCeeeeEEE-c----cccee---eCCceeecccccCCCCCcEEEEECCchhhccCCCceeeec
Q 011855 378 ILDPDGKLISRRVY-R----ESCIF---SDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIE 437 (476)
Q Consensus 378 ~LDP~~~lF~~RLy-R----e~C~~---~~g~yiKDLs~LGrdlskVVIIDDsp~s~~~q~~NgIpI~ 437 (476)
.+...+ |...+. . +.... ..+.|.+-++++|.+++++++|+|++.-.......|+...
T Consensus 69 ~l~~~g--~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i 134 (173)
T PRK06769 69 ELKGFG--FDDIYLCPHKHGDGCECRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTI 134 (173)
T ss_pred HHHhCC--cCEEEECcCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEE
Confidence 333333 333332 1 11111 1235667778889999999999999976655555555544
No 40
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=97.28 E-value=0.00047 Score=72.19 Aligned_cols=121 Identities=18% Similarity=0.208 Sum_probs=79.8
Q ss_pred CceEEEEecCcccccccccccCCCCceEEEEeccccceEEEeeCchHHHHHHHhhc-ccEEEEEcCC-------------
Q 011855 302 KSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTAS------------- 367 (476)
Q Consensus 302 kk~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Lsk-~YEIVIfTAs------------- 367 (476)
+++.|+||-||||+...... |. ....-.+.+.||+.++|++|.+ .|.++|.|+.
T Consensus 1 ~~k~l~lDrDgtl~~~~~~~-----y~-------~~~~~~~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l 68 (354)
T PRK05446 1 MQKILFIDRDGTLIEEPPTD-----FQ-------VDSLDKLAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDF 68 (354)
T ss_pred CCcEEEEeCCCCccCCCCcc-----cc-------ccCcccceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHH
Confidence 46799999999999764211 00 1112237889999999999984 6999999995
Q ss_pred --cHHHHHHHHHHHCCCCCeeeeEEEc-----ccceeeC---CceeecccccCCCCCcEEEEECCchhhccCCCceeeec
Q 011855 368 --QSIYAAQLLDILDPDGKLISRRVYR-----ESCIFSD---GTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIE 437 (476)
Q Consensus 368 --~~~YA~~ILd~LDP~~~lF~~RLyR-----e~C~~~~---g~yiKDLs~LGrdlskVVIIDDsp~s~~~q~~NgIpI~ 437 (476)
...++..+++.+.. +|...++. +.|.... +.+..-+..++.+++++++|-|+..-......+|+..-
T Consensus 69 ~~~~~~i~~iL~~~gl---~fd~i~i~~~~~sd~~~~rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I 145 (354)
T PRK05446 69 DPPHNLMMQIFESQGI---KFDEVLICPHFPEDNCSCRKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGI 145 (354)
T ss_pred hhHHHHHHHHHHHcCC---ceeeEEEeCCcCcccCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEE
Confidence 24556666666554 36555554 3433221 12223345568899999999999866655555666543
No 41
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=97.28 E-value=0.00014 Score=71.36 Aligned_cols=88 Identities=22% Similarity=0.320 Sum_probs=70.5
Q ss_pred EeeCchHHHHHHHhhcccEEEEEcCCcHHHHHHHHHHHCCCCCeeeeEEEccc---------ceeeCCceeecccccCCC
Q 011855 342 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRES---------CIFSDGTYTKDLTVLGVD 412 (476)
Q Consensus 342 V~lRPgl~eFLe~Lsk~YEIVIfTAs~~~YA~~ILd~LDP~~~lF~~RLyRe~---------C~~~~g~yiKDLs~LGrd 412 (476)
++.-|-|++||-.|.+.+ .++||.+.+..|..+|++|+... .|...++.+. |......|.|-.+..|.+
T Consensus 99 LkPD~~LRnlLL~l~~r~-k~~FTNa~k~HA~r~Lk~LGieD-cFegii~~e~~np~~~~~vcKP~~~afE~a~k~agi~ 176 (244)
T KOG3109|consen 99 LKPDPVLRNLLLSLKKRR-KWIFTNAYKVHAIRILKKLGIED-CFEGIICFETLNPIEKTVVCKPSEEAFEKAMKVAGID 176 (244)
T ss_pred cCCCHHHHHHHHhCcccc-EEEecCCcHHHHHHHHHHhChHH-hccceeEeeccCCCCCceeecCCHHHHHHHHHHhCCC
Confidence 677788999999999877 89999999999999999999886 7888887432 223344566667777887
Q ss_pred -CCcEEEEECCchhhccCCC
Q 011855 413 -LAKVAIIDNSPQVFRLQVN 431 (476)
Q Consensus 413 -lskVVIIDDsp~s~~~q~~ 431 (476)
++|++++||+.........
T Consensus 177 ~p~~t~FfDDS~~NI~~ak~ 196 (244)
T KOG3109|consen 177 SPRNTYFFDDSERNIQTAKE 196 (244)
T ss_pred CcCceEEEcCchhhHHHHHh
Confidence 9999999999987754443
No 42
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=97.27 E-value=0.00027 Score=70.52 Aligned_cols=98 Identities=11% Similarity=0.177 Sum_probs=81.1
Q ss_pred EeeCchHHHHHHHhh-cccEEEEEcCCcHHHHHHHHHHHCCCCCeeeeEEEcccceeeC---CceeecccccCCCCCcEE
Q 011855 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKVA 417 (476)
Q Consensus 342 V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~~ILd~LDP~~~lF~~RLyRe~C~~~~---g~yiKDLs~LGrdlskVV 417 (476)
+.+.||+.++|++|. +.|.++|.|++.+.++..+++.++-.+ +|+..+..+.+...+ ..|.+-+.++|.++++++
T Consensus 108 ~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~-~Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~~~p~~~l 186 (260)
T PLN03243 108 YRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEG-FFSVVLAAEDVYRGKPDPEMFMYAAERLGFIPERCI 186 (260)
T ss_pred cccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHh-hCcEEEecccCCCCCCCHHHHHHHHHHhCCChHHeE
Confidence 567899999999998 569999999999999999999998765 899998877664332 356777888999999999
Q ss_pred EEECCchhhccCCCceeeecccc
Q 011855 418 IIDNSPQVFRLQVNNGIPIESWF 440 (476)
Q Consensus 418 IIDDsp~s~~~q~~NgIpI~~f~ 440 (476)
+|+|+..-.......|+......
T Consensus 187 ~IgDs~~Di~aA~~aG~~~i~v~ 209 (260)
T PLN03243 187 VFGNSNSSVEAAHDGCMKCVAVA 209 (260)
T ss_pred EEcCCHHHHHHHHHcCCEEEEEe
Confidence 99999987777667777655443
No 43
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=97.26 E-value=0.00077 Score=66.90 Aligned_cols=131 Identities=11% Similarity=0.092 Sum_probs=75.6
Q ss_pred CCCceEEEEecCcccccccccc-cCCCCceEE--EEecccc--------ceEEEeeCchHHHHHHHhh-cccEEEEEcCC
Q 011855 300 GRKSVTLVLDLDETLVHSTLEY-CDDADFTFT--VFFNMKE--------HTVYVKQRPHLKTFLERVA-EMFEVVIFTAS 367 (476)
Q Consensus 300 ~~kk~tLVLDLDeTLVhSs~~~-~~~~df~~~--v~~~~~~--------~~~~V~lRPgl~eFLe~Ls-k~YEIVIfTAs 367 (476)
.++++.++||+|||+++++... .....|.-. -+..... ...+....||+.+||+++. +.++|++-|+.
T Consensus 60 ~~~p~av~~DIDeTvldnsp~~~~~~~~f~~~~~~y~~~~~fw~~y~~~~~~~a~p~~Ga~elL~~L~~~G~~I~iVTnR 139 (237)
T PRK11009 60 GRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQKFWEKMNNGWDEFSIPKEVARQLIDMHVKRGDSIYFITGR 139 (237)
T ss_pred CCCCcEEEEECcCccccCCchheeeeeccCCCcccccChHHHHHHHHhcccccCcchHHHHHHHHHHHHCCCeEEEEeCC
Confidence 5567799999999999975211 111111000 0000000 1224556666999999995 78999999994
Q ss_pred ----cHHHHHHHHHHHCC-CCCeeeeEEEcccceeeCCceeecccccCCCCCcEEEEECCchhhccCCCceeee
Q 011855 368 ----QSIYAAQLLDILDP-DGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPI 436 (476)
Q Consensus 368 ----~~~YA~~ILd~LDP-~~~lF~~RLyRe~C~~~~g~yiKDLs~LGrdlskVVIIDDsp~s~~~q~~NgIpI 436 (476)
...+++.+++.+.. ...+|...+..+.. ..... ..-+. ...-+|+|-|+..-+......|+..
T Consensus 140 ~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~-~K~~K-~~~l~----~~~i~I~IGDs~~Di~aA~~AGi~~ 207 (237)
T PRK11009 140 TATKTETVSKTLADDFHIPADNMNPVIFAGDKP-GQYTK-TQWLK----KKNIRIFYGDSDNDITAAREAGARG 207 (237)
T ss_pred CCcccHHHHHHHHHHcCCCcccceeEEEcCCCC-CCCCH-HHHHH----hcCCeEEEcCCHHHHHHHHHcCCcE
Confidence 56789999987765 23367555544431 11110 11111 2233889999987665554555543
No 44
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=97.26 E-value=0.00023 Score=67.37 Aligned_cols=95 Identities=16% Similarity=0.214 Sum_probs=75.3
Q ss_pred EEeeCchHHHHHHHhhc-ccEEEEEcCCcHHHHHHHHHHHCCCCCeeeeEEEcccceeeC---CceeecccccCCCCCcE
Q 011855 341 YVKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKV 416 (476)
Q Consensus 341 ~V~lRPgl~eFLe~Lsk-~YEIVIfTAs~~~YA~~ILd~LDP~~~lF~~RLyRe~C~~~~---g~yiKDLs~LGrdlskV 416 (476)
++.+.||+.+||++|.+ .+.++|.|++...++...++.++... +|+.++..+...... ..|.+-++++|.+++++
T Consensus 92 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~-~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~ 170 (221)
T TIGR02253 92 YLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRD-FFDAVITSEEEGVEKPHPKIFYAALKRLGVKPEEA 170 (221)
T ss_pred hCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHH-hccEEEEeccCCCCCCCHHHHHHHHHHcCCChhhE
Confidence 36789999999999985 59999999999999999999998765 888888776654322 35677788899999999
Q ss_pred EEEECCc-hhhccCCCceeee
Q 011855 417 AIIDNSP-QVFRLQVNNGIPI 436 (476)
Q Consensus 417 VIIDDsp-~s~~~q~~NgIpI 436 (476)
|+|.|++ .-+......|+..
T Consensus 171 ~~igDs~~~di~~A~~aG~~~ 191 (221)
T TIGR02253 171 VMVGDRLDKDIKGAKNLGMKT 191 (221)
T ss_pred EEECCChHHHHHHHHHCCCEE
Confidence 9999998 4554444455544
No 45
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=97.25 E-value=0.00035 Score=68.57 Aligned_cols=97 Identities=16% Similarity=0.251 Sum_probs=80.5
Q ss_pred EeeCchHHHHHHHhh-cccEEEEEcCCcHHHHHHHHHHHCCCCCeeeeEEEcccceee---CCceeecccccCCCCCcEE
Q 011855 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFS---DGTYTKDLTVLGVDLAKVA 417 (476)
Q Consensus 342 V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~~ILd~LDP~~~lF~~RLyRe~C~~~---~g~yiKDLs~LGrdlskVV 417 (476)
+.+.||+.++|++|. +.+.++|-|++.+.+++.+++.++... +|+..+..+.+... ...|.+-+.++|.++++++
T Consensus 107 ~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~-~Fd~iv~~~~~~~~KP~p~~~~~a~~~~~~~~~~~l 185 (248)
T PLN02770 107 LKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSD-FFQAVIIGSECEHAKPHPDPYLKALEVLKVSKDHTF 185 (248)
T ss_pred CCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChh-hCcEEEecCcCCCCCCChHHHHHHHHHhCCChhHEE
Confidence 667899999999996 679999999999999999999998775 89988887765433 2356777888999999999
Q ss_pred EEECCchhhccCCCceeeeccc
Q 011855 418 IIDNSPQVFRLQVNNGIPIESW 439 (476)
Q Consensus 418 IIDDsp~s~~~q~~NgIpI~~f 439 (476)
+|.|++.-......+|++.-..
T Consensus 186 ~vgDs~~Di~aA~~aGi~~i~v 207 (248)
T PLN02770 186 VFEDSVSGIKAGVAAGMPVVGL 207 (248)
T ss_pred EEcCCHHHHHHHHHCCCEEEEE
Confidence 9999998776666677776544
No 46
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=97.24 E-value=0.001 Score=67.69 Aligned_cols=72 Identities=19% Similarity=0.274 Sum_probs=58.2
Q ss_pred CCceEEEEecCcccccccccccCCCCceEEEEeccccceEEEee-CchHHHHHHHhhcc-cEEEEEcCCcHHHHHHHHHH
Q 011855 301 RKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQ-RPHLKTFLERVAEM-FEVVIFTASQSIYAAQLLDI 378 (476)
Q Consensus 301 ~kk~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~l-RPgl~eFLe~Lsk~-YEIVIfTAs~~~YA~~ILd~ 378 (476)
.++-++|+|||.|||-.... +++ -|.+.+.|..+.+. .-+++||.|.++++..-++.
T Consensus 120 ~~phVIVfDlD~TLItd~~~---------------------v~Ir~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~~ 178 (297)
T PF05152_consen 120 EPPHVIVFDLDSTLITDEGD---------------------VRIRDPAVYDSLRELKEQGCVLVLWSYGNREHVRHSLKE 178 (297)
T ss_pred CCCcEEEEECCCcccccCCc---------------------cccCChHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHH
Confidence 44559999999999965321 222 38889999999965 59999999999999999999
Q ss_pred HCCCCCeeeeEEEccc
Q 011855 379 LDPDGKLISRRVYRES 394 (476)
Q Consensus 379 LDP~~~lF~~RLyRe~ 394 (476)
+...+ +|+..|.+..
T Consensus 179 ~~L~~-~Fd~ii~~G~ 193 (297)
T PF05152_consen 179 LKLEG-YFDIIICGGN 193 (297)
T ss_pred hCCcc-ccEEEEeCCc
Confidence 99885 8988888543
No 47
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=97.22 E-value=0.00017 Score=66.71 Aligned_cols=92 Identities=23% Similarity=0.285 Sum_probs=73.4
Q ss_pred EeeCchHHHHHHHhhcccEEEEEcCCcHHHHHHHHHHHCCCCCeeeeEEEccccee-------eCCceeecccccCCCCC
Q 011855 342 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIF-------SDGTYTKDLTVLGVDLA 414 (476)
Q Consensus 342 V~lRPgl~eFLe~Lsk~YEIVIfTAs~~~YA~~ILd~LDP~~~lF~~RLyRe~C~~-------~~g~yiKDLs~LGrdls 414 (476)
+...||+.++|++|. +.++|.|++.+.++..+++.++... +|+..+..+.... .+..|.+-+.++|.+++
T Consensus 83 ~~~~~g~~~~L~~L~--~~~~i~Tn~~~~~~~~~l~~~gl~~-~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~ 159 (184)
T TIGR01993 83 LKPDPELRNLLLRLP--GRKIIFTNGDRAHARRALNRLGIED-CFDGIFCFDTANPDYLLPKPSPQAYEKALREAGVDPE 159 (184)
T ss_pred CCCCHHHHHHHHhCC--CCEEEEeCCCHHHHHHHHHHcCcHh-hhCeEEEeecccCccCCCCCCHHHHHHHHHHhCCCcc
Confidence 456799999999998 6899999999999999999998654 8988887655432 23356677788999999
Q ss_pred cEEEEECCchhhccCCCceeee
Q 011855 415 KVAIIDNSPQVFRLQVNNGIPI 436 (476)
Q Consensus 415 kVVIIDDsp~s~~~q~~NgIpI 436 (476)
++++|+|++.........|+..
T Consensus 160 ~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 160 RAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred ceEEEeCCHHHHHHHHHcCCEE
Confidence 9999999997666555666653
No 48
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=97.21 E-value=0.00025 Score=68.30 Aligned_cols=95 Identities=17% Similarity=0.145 Sum_probs=73.7
Q ss_pred EeeCchHHHHHHHhh-cccEEEEEcCCcHHHHHHHHHHHCCCCCeeeeEEEcccceeeC---CceeecccccCCCCCcEE
Q 011855 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKVA 417 (476)
Q Consensus 342 V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~~ILd~LDP~~~lF~~RLyRe~C~~~~---g~yiKDLs~LGrdlskVV 417 (476)
...-||+.+.|..++ +.|.+.|.|+.....++.+++.++-.. +|..++..+.....+ ..+..-+..+|.+++++|
T Consensus 88 ~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~-~F~~i~g~~~~~~~KP~P~~l~~~~~~~~~~~~~~l 166 (220)
T COG0546 88 SRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLAD-YFDVIVGGDDVPPPKPDPEPLLLLLEKLGLDPEEAL 166 (220)
T ss_pred CccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCcc-ccceEEcCCCCCCCCcCHHHHHHHHHHhCCChhheE
Confidence 467899999999999 679999999999999999999998876 887777633332222 234455677888877999
Q ss_pred EEECCchhhccCCCceeeec
Q 011855 418 IIDNSPQVFRLQVNNGIPIE 437 (476)
Q Consensus 418 IIDDsp~s~~~q~~NgIpI~ 437 (476)
+|=|+..-.......|++..
T Consensus 167 ~VGDs~~Di~aA~~Ag~~~v 186 (220)
T COG0546 167 MVGDSLNDILAAKAAGVPAV 186 (220)
T ss_pred EECCCHHHHHHHHHcCCCEE
Confidence 99999987766666665533
No 49
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=97.20 E-value=0.0003 Score=66.26 Aligned_cols=97 Identities=14% Similarity=0.123 Sum_probs=78.6
Q ss_pred EEeeCchHHHHHHHhh-cccEEEEEcCCcHHHHHHHHHHHCCCCCeeeeEEEcccceee---CCceeecccccCCCCCcE
Q 011855 341 YVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFS---DGTYTKDLTVLGVDLAKV 416 (476)
Q Consensus 341 ~V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~~ILd~LDP~~~lF~~RLyRe~C~~~---~g~yiKDLs~LGrdlskV 416 (476)
.+...||+.++|++|. +.+.++|.|++...++..+++.++..+ +|+..+..+++... ...|.+-++++|.+++++
T Consensus 73 ~~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~-~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~ 151 (205)
T TIGR01454 73 EVEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLP-LFDHVIGSDEVPRPKPAPDIVREALRLLDVPPEDA 151 (205)
T ss_pred ccccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChh-heeeEEecCcCCCCCCChHHHHHHHHHcCCChhhe
Confidence 3677899999999997 579999999999999999999998876 78887776654322 234566677889999999
Q ss_pred EEEECCchhhccCCCceeeecc
Q 011855 417 AIIDNSPQVFRLQVNNGIPIES 438 (476)
Q Consensus 417 VIIDDsp~s~~~q~~NgIpI~~ 438 (476)
++|+|++.-+.....+|++...
T Consensus 152 l~igD~~~Di~aA~~~Gi~~i~ 173 (205)
T TIGR01454 152 VMVGDAVTDLASARAAGTATVA 173 (205)
T ss_pred EEEcCCHHHHHHHHHcCCeEEE
Confidence 9999999877666677877543
No 50
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=97.14 E-value=0.00039 Score=65.22 Aligned_cols=97 Identities=15% Similarity=0.128 Sum_probs=76.7
Q ss_pred EeeCchHHHHHHHhh-cccEEEEEcCCcHHHHHHHHHHHCCCCCeeeeEEEcccceeeC---CceeecccccCCCCCcEE
Q 011855 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKVA 417 (476)
Q Consensus 342 V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~~ILd~LDP~~~lF~~RLyRe~C~~~~---g~yiKDLs~LGrdlskVV 417 (476)
+.++||+.++|+.+. +.+.++|.|++.+.+++.+++.++-.+ +|...+..+.....+ ..|.+-++.+|.++++++
T Consensus 84 ~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~-~f~~~~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~ 162 (213)
T TIGR01449 84 TSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAK-YFSVLIGGDSLAQRKPHPDPLLLAAERLGVAPQQMV 162 (213)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHh-hCcEEEecCCCCCCCCChHHHHHHHHHcCCChhHeE
Confidence 678999999999998 569999999999999999999998765 787766655432221 245677788899999999
Q ss_pred EEECCchhhccCCCceeeeccc
Q 011855 418 IIDNSPQVFRLQVNNGIPIESW 439 (476)
Q Consensus 418 IIDDsp~s~~~q~~NgIpI~~f 439 (476)
+|+|++.-+......|++....
T Consensus 163 ~igDs~~d~~aa~~aG~~~i~v 184 (213)
T TIGR01449 163 YVGDSRVDIQAARAAGCPSVLL 184 (213)
T ss_pred EeCCCHHHHHHHHHCCCeEEEE
Confidence 9999998776655667665443
No 51
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=97.11 E-value=0.00031 Score=65.69 Aligned_cols=94 Identities=15% Similarity=0.184 Sum_probs=75.0
Q ss_pred EeeCchHHHHHHHhhc-ccEEEEEcCCcHHHHHHHHHHHCCCCCeeeeEEEcccceee---CCceeecccccCCCCCcEE
Q 011855 342 VKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFS---DGTYTKDLTVLGVDLAKVA 417 (476)
Q Consensus 342 V~lRPgl~eFLe~Lsk-~YEIVIfTAs~~~YA~~ILd~LDP~~~lF~~RLyRe~C~~~---~g~yiKDLs~LGrdlskVV 417 (476)
+...||+.++|+++++ .|.++|.|++...++..+++.+.-.. +|+..+..++.... ...|.+-++.+|.++++++
T Consensus 91 ~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~-~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~~~~ 169 (198)
T TIGR01428 91 LPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDD-PFDAVLSADAVRAYKPAPQVYQLALEALGVPPDEVL 169 (198)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChh-hhheeEehhhcCCCCCCHHHHHHHHHHhCCChhhEE
Confidence 5678999999999996 59999999999999999999987654 78888887655432 2345667778899999999
Q ss_pred EEECCchhhccCCCceeee
Q 011855 418 IIDNSPQVFRLQVNNGIPI 436 (476)
Q Consensus 418 IIDDsp~s~~~q~~NgIpI 436 (476)
+|+|++.-.......|+..
T Consensus 170 ~vgD~~~Di~~A~~~G~~~ 188 (198)
T TIGR01428 170 FVASNPWDLGGAKKFGFKT 188 (198)
T ss_pred EEeCCHHHHHHHHHCCCcE
Confidence 9999997665555566653
No 52
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=97.10 E-value=0.00042 Score=65.30 Aligned_cols=94 Identities=14% Similarity=0.099 Sum_probs=75.6
Q ss_pred EeeCchHHHHHHHhhcccEEEEEcCCcHHHHHHHHHHHCCCCCeeeeEEEcccceeeC---Cceeeccccc-CCCCCcEE
Q 011855 342 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVL-GVDLAKVA 417 (476)
Q Consensus 342 V~lRPgl~eFLe~Lsk~YEIVIfTAs~~~YA~~ILd~LDP~~~lF~~RLyRe~C~~~~---g~yiKDLs~L-GrdlskVV 417 (476)
+.++||+.++|+++.+.+.++|-|++...++..+++.+.-.+ +|+..+..+...... ..|.+-++++ |.+++++|
T Consensus 96 ~~~~~g~~~~L~~l~~~~~~~i~Sn~~~~~~~~~l~~~~l~~-~fd~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~v 174 (224)
T TIGR02254 96 HQLLPGAFELMENLQQKFRLYIVTNGVRETQYKRLRKSGLFP-FFDDIFVSEDAGIQKPDKEIFNYALERMPKFSKEEVL 174 (224)
T ss_pred CeeCccHHHHHHHHHhcCcEEEEeCCchHHHHHHHHHCCcHh-hcCEEEEcCccCCCCCCHHHHHHHHHHhcCCCchheE
Confidence 678999999999999779999999999999999999988765 898888876654332 3466778889 99999999
Q ss_pred EEECCc-hhhccCCCceeee
Q 011855 418 IIDNSP-QVFRLQVNNGIPI 436 (476)
Q Consensus 418 IIDDsp-~s~~~q~~NgIpI 436 (476)
+|+|++ .-......+|++.
T Consensus 175 ~igD~~~~di~~A~~~G~~~ 194 (224)
T TIGR02254 175 MIGDSLTADIKGGQNAGLDT 194 (224)
T ss_pred EECCCcHHHHHHHHHCCCcE
Confidence 999997 4555444566544
No 53
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=97.09 E-value=0.00031 Score=67.67 Aligned_cols=49 Identities=20% Similarity=0.314 Sum_probs=43.1
Q ss_pred EeeCchHHHHHHHhhcccEEEEEcCCcHHHHHHHHHHHCCCCCeeeeEEE
Q 011855 342 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVY 391 (476)
Q Consensus 342 V~lRPgl~eFLe~Lsk~YEIVIfTAs~~~YA~~ILd~LDP~~~lF~~RLy 391 (476)
+.++||+.+||+++.+.+.++|-|++...+++++++.++-.. +|..++-
T Consensus 67 i~l~pga~ell~~lk~~~~~~IVS~~~~~~~~~il~~lgi~~-~~an~l~ 115 (203)
T TIGR02137 67 LKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPT-LLCHKLE 115 (203)
T ss_pred CCCCccHHHHHHHHHhCCeEEEEeCChHHHHHHHHHHcCCch-hhceeeE
Confidence 678999999999999878999999999999999999998764 6665554
No 54
>PLN02954 phosphoserine phosphatase
Probab=97.07 E-value=0.00024 Score=67.54 Aligned_cols=92 Identities=9% Similarity=0.129 Sum_probs=60.6
Q ss_pred EeeCchHHHHHHHhh-cccEEEEEcCCcHHHHHHHHHHHCCCC-CeeeeEEEccc-------------ceee-CCc-eee
Q 011855 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDG-KLISRRVYRES-------------CIFS-DGT-YTK 404 (476)
Q Consensus 342 V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~~ILd~LDP~~-~lF~~RLyRe~-------------C~~~-~g~-yiK 404 (476)
..++||+.++|+++. +.+.++|-|++.+.+++.+++.++... .+|..++.-+. |... +.. +.+
T Consensus 83 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i~~ 162 (224)
T PLN02954 83 PRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKAEAVQH 162 (224)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCCcEECccCCCcccCCccHHHHHHH
Confidence 467899999999997 569999999999999999999987652 36655443111 1000 000 111
Q ss_pred cccccCCCCCcEEEEECCchhhccCCCceee
Q 011855 405 DLTVLGVDLAKVAIIDNSPQVFRLQVNNGIP 435 (476)
Q Consensus 405 DLs~LGrdlskVVIIDDsp~s~~~q~~NgIp 435 (476)
-+..+| .+++|+|-|++.-......+|+.
T Consensus 163 ~~~~~~--~~~~i~iGDs~~Di~aa~~~~~~ 191 (224)
T PLN02954 163 IKKKHG--YKTMVMIGDGATDLEARKPGGAD 191 (224)
T ss_pred HHHHcC--CCceEEEeCCHHHHHhhhcCCCC
Confidence 112234 46899999999877665444444
No 55
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=97.04 E-value=0.00072 Score=62.02 Aligned_cols=112 Identities=19% Similarity=0.154 Sum_probs=73.9
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEeccccceEEEeeCchHHHHHHHhh-cccEEEEEcCCcHHHHHHHHHHHCCC
Q 011855 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPD 382 (476)
Q Consensus 304 ~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~~ILd~LDP~ 382 (476)
+.++||+||||+...... ..+ ....-++.++|+. -|++|. +.+.++|.|+..+..+..+++.+...
T Consensus 2 ~~~~~D~Dgtl~~~~~~~----------~~~-~~~~~~~~~~~~~--~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~ 68 (154)
T TIGR01670 2 RLLILDVDGVLTDGKIYY----------TNN-GEEIKAFNVRDGY--GIRCALKSGIEVAIITGRKAKLVEDRCKTLGIT 68 (154)
T ss_pred eEEEEeCceeEEcCeEEE----------CCC-CcEEEEEechhHH--HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCC
Confidence 478999999998532110 001 1112234667776 688887 57999999999999999999998866
Q ss_pred CCeeeeEEEcccceeeCCceeecccccCCCCCcEEEEECCchhhccCCCceee
Q 011855 383 GKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIP 435 (476)
Q Consensus 383 ~~lF~~RLyRe~C~~~~g~yiKDLs~LGrdlskVVIIDDsp~s~~~q~~NgIp 435 (476)
. +|... ......+.+-+..+|.++++++.|-|+..-...-...|+.
T Consensus 69 ~-~~~~~------~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~ 114 (154)
T TIGR01670 69 H-LYQGQ------SNKLIAFSDILEKLALAPENVAYIGDDLIDWPVMEKVGLS 114 (154)
T ss_pred E-EEecc------cchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCe
Confidence 4 55321 1111223344566788999999999998765544444444
No 56
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=96.97 E-value=0.00076 Score=64.41 Aligned_cols=100 Identities=14% Similarity=0.081 Sum_probs=80.7
Q ss_pred EeeCchHHHHHHHhh-cccEEEEEcCCcHHHHHHHHHHHCCCCCeeeeEEEcccceeeC---CceeecccccCCCCCcEE
Q 011855 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKVA 417 (476)
Q Consensus 342 V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~~ILd~LDP~~~lF~~RLyRe~C~~~~---g~yiKDLs~LGrdlskVV 417 (476)
..+.||+.++|++++ +.+.++|.|++...+++.+++.+.-.+ +|+..+.++.....+ ..|.+-++.+|.++++++
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~-~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~ 169 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRD-YFDALASAEKLPYSKPHPEVYLNCAAKLGVDPLTCV 169 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchh-cccEEEEcccCCCCCCCHHHHHHHHHHcCCCHHHeE
Confidence 567899999999998 679999999999999999999988765 788887776543222 256667788899999999
Q ss_pred EEECCchhhccCCCceeeeccccCC
Q 011855 418 IIDNSPQVFRLQVNNGIPIESWFDD 442 (476)
Q Consensus 418 IIDDsp~s~~~q~~NgIpI~~f~gd 442 (476)
+|+|++.-.......|++..-+...
T Consensus 170 ~igDs~~Di~aA~~aG~~~i~v~~~ 194 (222)
T PRK10826 170 ALEDSFNGMIAAKAARMRSIVVPAP 194 (222)
T ss_pred EEcCChhhHHHHHHcCCEEEEecCC
Confidence 9999998877777778776555443
No 57
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=96.94 E-value=0.0022 Score=57.94 Aligned_cols=73 Identities=21% Similarity=0.167 Sum_probs=53.8
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEeccccceEEEeeCchHHHHHHHh-hcccEEEEEcCCcHHHHH---------
Q 011855 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERV-AEMFEVVIFTASQSIYAA--------- 373 (476)
Q Consensus 304 ~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~L-sk~YEIVIfTAs~~~YA~--------- 373 (476)
+.+++||||||+..... .+. .....|.+.+.|+++ .+.++|+++|+-......
T Consensus 2 K~i~~DiDGTL~~~~~~-----~y~------------~~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~~n~~~i~~~ 64 (126)
T TIGR01689 2 KRLVMDLDNTITLTENG-----DYA------------NVAPILAVIEKLRHYKALGFEIVISSSRNMRTYEGNVGKINIH 64 (126)
T ss_pred CEEEEeCCCCcccCCCC-----ccc------------ccccCHHHHHHHHHHHHCCCEEEEECCCCchhhhccccccchh
Confidence 37899999999754210 000 134678899999998 478999999999888876
Q ss_pred ---HHHHHHCCCCCeeeeEEEcc
Q 011855 374 ---QLLDILDPDGKLISRRVYRE 393 (476)
Q Consensus 374 ---~ILd~LDP~~~lF~~RLyRe 393 (476)
.+++.|+.++-.++..+.|.
T Consensus 65 ~~~~t~~wL~k~~ipYd~l~~~k 87 (126)
T TIGR01689 65 TLPIIILWLNQHNVPYDEIYVGK 87 (126)
T ss_pred hHHHHHHHHHHcCCCCceEEeCC
Confidence 77888888776666666654
No 58
>PRK09449 dUMP phosphatase; Provisional
Probab=96.91 E-value=0.00079 Score=64.05 Aligned_cols=93 Identities=15% Similarity=0.141 Sum_probs=73.1
Q ss_pred EeeCchHHHHHHHhhcccEEEEEcCCcHHHHHHHHHHHCCCCCeeeeEEEcccceee---CCceeecccccCC-CCCcEE
Q 011855 342 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFS---DGTYTKDLTVLGV-DLAKVA 417 (476)
Q Consensus 342 V~lRPgl~eFLe~Lsk~YEIVIfTAs~~~YA~~ILd~LDP~~~lF~~RLyRe~C~~~---~g~yiKDLs~LGr-dlskVV 417 (476)
+...||+.++|++|.+.|.++|.|++...+++.+++.++..+ +|+..+..+++... ...|.+-++.+|. +.++++
T Consensus 94 ~~~~~g~~~~L~~L~~~~~~~i~Tn~~~~~~~~~l~~~~l~~-~fd~v~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~ 172 (224)
T PRK09449 94 CTPLPGAVELLNALRGKVKMGIITNGFTELQQVRLERTGLRD-YFDLLVISEQVGVAKPDVAIFDYALEQMGNPDRSRVL 172 (224)
T ss_pred CccCccHHHHHHHHHhCCeEEEEeCCcHHHHHHHHHhCChHH-HcCEEEEECccCCCCCCHHHHHHHHHHcCCCCcccEE
Confidence 567899999999999889999999999999999999988765 89888887765433 2356677888886 457899
Q ss_pred EEECCch-hhccCCCceee
Q 011855 418 IIDNSPQ-VFRLQVNNGIP 435 (476)
Q Consensus 418 IIDDsp~-s~~~q~~NgIp 435 (476)
+|+|++. -.......|+.
T Consensus 173 ~vgD~~~~Di~~A~~aG~~ 191 (224)
T PRK09449 173 MVGDNLHSDILGGINAGID 191 (224)
T ss_pred EEcCCcHHHHHHHHHCCCc
Confidence 9999973 55444445543
No 59
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=96.91 E-value=0.00078 Score=63.47 Aligned_cols=100 Identities=13% Similarity=0.142 Sum_probs=76.5
Q ss_pred EeeCchHHHHHHHhh-cccEEEEEcCCcHHHHHHHHHHHCCCCCeeeeEEEcccceeeC---CceeecccccCCCCCcEE
Q 011855 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKVA 417 (476)
Q Consensus 342 V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~~ILd~LDP~~~lF~~RLyRe~C~~~~---g~yiKDLs~LGrdlskVV 417 (476)
...+||+.++|+++. +.|.++|.|++....+..++.....-..+|+..++.+++...+ ..|.+-++.+|.++++++
T Consensus 83 ~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l 162 (199)
T PRK09456 83 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVLQAEGFSAADAV 162 (199)
T ss_pred hccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCCCCCCHHHHHHHHHHcCCChhHeE
Confidence 457999999999998 5799999999998877665544222234788888776655432 356677888999999999
Q ss_pred EEECCchhhccCCCceeeeccccC
Q 011855 418 IIDNSPQVFRLQVNNGIPIESWFD 441 (476)
Q Consensus 418 IIDDsp~s~~~q~~NgIpI~~f~g 441 (476)
+|||++.........|+...-+.+
T Consensus 163 ~vgD~~~di~aA~~aG~~~i~~~~ 186 (199)
T PRK09456 163 FFDDNADNIEAANALGITSILVTD 186 (199)
T ss_pred EeCCCHHHHHHHHHcCCEEEEecC
Confidence 999999887777778888765544
No 60
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=96.86 E-value=0.00049 Score=63.02 Aligned_cols=92 Identities=16% Similarity=0.196 Sum_probs=72.1
Q ss_pred EeeCchHHHHHHHhhc-ccEEEEEcCCcHHHHHHHHHHHCCCCCeeeeEEEcccceeeC---CceeecccccCCCCCcEE
Q 011855 342 VKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKVA 417 (476)
Q Consensus 342 V~lRPgl~eFLe~Lsk-~YEIVIfTAs~~~YA~~ILd~LDP~~~lF~~RLyRe~C~~~~---g~yiKDLs~LGrdlskVV 417 (476)
+...||+.++|++|.+ .+.++|-|++ .+++.+++.++-.+ +|+.++..+...... ..|.+-++.+|.+++++|
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~-~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v 163 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTD-YFDAIVDADEVKEGKPHPETFLLAAELLGVSPNECV 163 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHH-HCCEeeehhhCCCCCCChHHHHHHHHHcCCCHHHeE
Confidence 6789999999999984 6999999988 78999999887765 788887766543322 245566778899999999
Q ss_pred EEECCchhhccCCCceeee
Q 011855 418 IIDNSPQVFRLQVNNGIPI 436 (476)
Q Consensus 418 IIDDsp~s~~~q~~NgIpI 436 (476)
+|+|++.-......+|++.
T Consensus 164 ~IgD~~~di~aA~~~G~~~ 182 (185)
T TIGR02009 164 VFEDALAGVQAARAAGMFA 182 (185)
T ss_pred EEeCcHhhHHHHHHCCCeE
Confidence 9999998776666667654
No 61
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=96.84 E-value=0.0011 Score=70.04 Aligned_cols=97 Identities=10% Similarity=0.097 Sum_probs=80.4
Q ss_pred EeeCchHHHHHHHhh-cccEEEEEcCCcHHHHHHHHHHHCCCCCeeeeEEEcccceeeC---CceeecccccCCCCCcEE
Q 011855 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKVA 417 (476)
Q Consensus 342 V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~~ILd~LDP~~~lF~~RLyRe~C~~~~---g~yiKDLs~LGrdlskVV 417 (476)
+.+.||+.+||++|. +.+.++|-|++.+.+++.+++.++..+ ||+..+..+++.... ..|.+-+..+|.+++++|
T Consensus 215 ~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~-yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~Peecl 293 (381)
T PLN02575 215 YRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRG-FFSVIVAAEDVYRGKPDPEMFIYAAQLLNFIPERCI 293 (381)
T ss_pred CCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHH-HceEEEecCcCCCCCCCHHHHHHHHHHcCCCcccEE
Confidence 467899999999997 569999999999999999999998765 899998888765332 256778888999999999
Q ss_pred EEECCchhhccCCCceeeeccc
Q 011855 418 IIDNSPQVFRLQVNNGIPIESW 439 (476)
Q Consensus 418 IIDDsp~s~~~q~~NgIpI~~f 439 (476)
+|+|++.-.......|+.....
T Consensus 294 ~IGDS~~DIeAAk~AGm~~IgV 315 (381)
T PLN02575 294 VFGNSNQTVEAAHDARMKCVAV 315 (381)
T ss_pred EEcCCHHHHHHHHHcCCEEEEE
Confidence 9999998776666666655544
No 62
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=96.79 E-value=0.0008 Score=62.04 Aligned_cols=94 Identities=15% Similarity=0.154 Sum_probs=75.7
Q ss_pred EeeCchHHHHHHHhhcccEEEEEcCCcHHHHHHHHHHHCCCCCeeeeEEEcccceeeC---CceeecccccCCCCCcEEE
Q 011855 342 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKVAI 418 (476)
Q Consensus 342 V~lRPgl~eFLe~Lsk~YEIVIfTAs~~~YA~~ILd~LDP~~~lF~~RLyRe~C~~~~---g~yiKDLs~LGrdlskVVI 418 (476)
+..-|+ .+.|+++.+.+.++|-|++.+.+++.+++.+.-.+ +|+..+..+++...+ ..|.+-++++|.+++++|+
T Consensus 87 ~~~~~~-~e~L~~L~~~~~l~I~T~~~~~~~~~~l~~~~l~~-~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~ 164 (188)
T PRK10725 87 VEPLPL-IEVVKAWHGRRPMAVGTGSESAIAEALLAHLGLRR-YFDAVVAADDVQHHKPAPDTFLRCAQLMGVQPTQCVV 164 (188)
T ss_pred CCCccH-HHHHHHHHhCCCEEEEcCCchHHHHHHHHhCCcHh-HceEEEehhhccCCCCChHHHHHHHHHcCCCHHHeEE
Confidence 445676 48999998779999999999999999999998765 899888887764332 2466777888999999999
Q ss_pred EECCchhhccCCCceeeec
Q 011855 419 IDNSPQVFRLQVNNGIPIE 437 (476)
Q Consensus 419 IDDsp~s~~~q~~NgIpI~ 437 (476)
|+|++.-+......|++..
T Consensus 165 igDs~~di~aA~~aG~~~i 183 (188)
T PRK10725 165 FEDADFGIQAARAAGMDAV 183 (188)
T ss_pred EeccHhhHHHHHHCCCEEE
Confidence 9999988777666777654
No 63
>PRK11587 putative phosphatase; Provisional
Probab=96.77 E-value=0.0021 Score=61.39 Aligned_cols=97 Identities=12% Similarity=0.080 Sum_probs=75.0
Q ss_pred EeeCchHHHHHHHhh-cccEEEEEcCCcHHHHHHHHHHHCCCCCeeeeEEEcccceee---CCceeecccccCCCCCcEE
Q 011855 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFS---DGTYTKDLTVLGVDLAKVA 417 (476)
Q Consensus 342 V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~~ILd~LDP~~~lF~~RLyRe~C~~~---~g~yiKDLs~LGrdlskVV 417 (476)
+.+.||+.++|++|. +.+.++|-|++...++..+++..... +|...+..++.... ...|.+-+..+|..++++|
T Consensus 82 ~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~--~~~~i~~~~~~~~~KP~p~~~~~~~~~~g~~p~~~l 159 (218)
T PRK11587 82 ITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLP--APEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQECV 159 (218)
T ss_pred ceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCC--CccEEEEHHHhcCCCCCcHHHHHHHHHcCCCcccEE
Confidence 577999999999997 67999999999999888888877652 45566666554322 2356777888999999999
Q ss_pred EEECCchhhccCCCceeeecccc
Q 011855 418 IIDNSPQVFRLQVNNGIPIESWF 440 (476)
Q Consensus 418 IIDDsp~s~~~q~~NgIpI~~f~ 440 (476)
+|+|++.-.......|+....+.
T Consensus 160 ~igDs~~di~aA~~aG~~~i~v~ 182 (218)
T PRK11587 160 VVEDAPAGVLSGLAAGCHVIAVN 182 (218)
T ss_pred EEecchhhhHHHHHCCCEEEEEC
Confidence 99999987766666777654443
No 64
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=96.73 E-value=0.0028 Score=69.59 Aligned_cols=109 Identities=12% Similarity=0.142 Sum_probs=71.7
Q ss_pred CCceEEEEecCcccccccccccCCCCceEEEEeccccceEEEeeCchHHHHHHHhh-cccEEEEEcCCcH----------
Q 011855 301 RKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQS---------- 369 (476)
Q Consensus 301 ~kk~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~---------- 369 (476)
.+.+++.||+||||+...... .| ......| ..+-||+.+.|++|. +.|.|+|+|+...
T Consensus 166 ~~~Kia~fD~DGTLi~t~sg~----~~------~~~~~d~-~~l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~ 234 (526)
T TIGR01663 166 GQEKIAGFDLDGTIIKTKSGK----VF------PKGPDDW-QIIFPEIPEKLKELEADGFKICIFTNQGGIARGKINADD 234 (526)
T ss_pred ccCcEEEEECCCCccccCCCc----cC------CCCHHHe-eecccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHH
Confidence 345799999999999653110 00 0011122 234699999999998 5799999999776
Q ss_pred --HHHHHHHHHHCCCCCeeeeEEEcccceeeC---Cceeeccccc----CCCCCcEEEEECCc
Q 011855 370 --IYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVL----GVDLAKVAIIDNSP 423 (476)
Q Consensus 370 --~YA~~ILd~LDP~~~lF~~RLyRe~C~~~~---g~yiKDLs~L----GrdlskVVIIDDsp 423 (476)
..+..+++.++. .|...+..+.|.+.. |.+..-+..+ +.+++++++|-|+.
T Consensus 235 ~~~ki~~iL~~lgi---pfdviia~~~~~~RKP~pGm~~~a~~~~~~~~~Id~~~S~~VGDaa 294 (526)
T TIGR01663 235 FKAKIEAIVAKLGV---PFQVFIAIGAGFYRKPLTGMWDHLKEEANDGTEIQEDDCFFVGDAA 294 (526)
T ss_pred HHHHHHHHHHHcCC---ceEEEEeCCCCCCCCCCHHHHHHHHHhcCcccCCCHHHeEEeCCcc
Confidence 468888888875 366544455554432 3333223333 57899999999998
No 65
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=96.68 E-value=0.0018 Score=63.17 Aligned_cols=98 Identities=12% Similarity=0.015 Sum_probs=77.2
Q ss_pred EeeCchHHHHHHHhh-cccEEEEEcCCcHHHHHHHHHHHCCCCCeeeeEEEcccceee---CCceeecccccCC-CCCcE
Q 011855 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFS---DGTYTKDLTVLGV-DLAKV 416 (476)
Q Consensus 342 V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~~ILd~LDP~~~lF~~RLyRe~C~~~---~g~yiKDLs~LGr-dlskV 416 (476)
+.+.||+.++|++|. +.+.++|-|++.+.+++.+++.++..+-+|+.++..+..... +..|.+-+.++|. +++++
T Consensus 98 ~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~ii~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~ 177 (253)
T TIGR01422 98 SSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYNVTTDDVPAGRPAPWMALKNAIELGVYDVAAC 177 (253)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceEEccccCCCCCCCHHHHHHHHHHcCCCCchhe
Confidence 577899999999997 569999999999999999999998776224666666654332 2356777788897 48999
Q ss_pred EEEECCchhhccCCCceeeeccc
Q 011855 417 AIIDNSPQVFRLQVNNGIPIESW 439 (476)
Q Consensus 417 VIIDDsp~s~~~q~~NgIpI~~f 439 (476)
|+|.|++.-.......|+.....
T Consensus 178 l~IGDs~~Di~aA~~aGi~~i~v 200 (253)
T TIGR01422 178 VKVGDTVPDIEEGRNAGMWTVGL 200 (253)
T ss_pred EEECCcHHHHHHHHHCCCeEEEE
Confidence 99999998777666777766554
No 66
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=96.62 E-value=0.0021 Score=62.12 Aligned_cols=95 Identities=12% Similarity=0.032 Sum_probs=75.1
Q ss_pred EeeCchHHHHHHHhh-cccEEEEEcCCcHHHHHHHHHHHCCCCCeeeeEEEcccceee---CCceeecccccCCCCCcEE
Q 011855 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFS---DGTYTKDLTVLGVDLAKVA 417 (476)
Q Consensus 342 V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~~ILd~LDP~~~lF~~RLyRe~C~~~---~g~yiKDLs~LGrdlskVV 417 (476)
+.+.||+.++|++|+ +.+.++|.|++...++..+++.++-.+ +|...+..+.+... ...|.+-++++|.++++++
T Consensus 94 ~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~-~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~l 172 (229)
T PRK13226 94 SQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQ-RCAVLIGGDTLAERKPHPLPLLVAAERIGVAPTDCV 172 (229)
T ss_pred CeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchh-cccEEEecCcCCCCCCCHHHHHHHHHHhCCChhhEE
Confidence 678999999999998 468999999999999999999987765 77766666654322 2246677788999999999
Q ss_pred EEECCchhhccCCCceeeec
Q 011855 418 IIDNSPQVFRLQVNNGIPIE 437 (476)
Q Consensus 418 IIDDsp~s~~~q~~NgIpI~ 437 (476)
+|+|++.-.......|+...
T Consensus 173 ~IGDs~~Di~aA~~aG~~~i 192 (229)
T PRK13226 173 YVGDDERDILAARAAGMPSV 192 (229)
T ss_pred EeCCCHHHHHHHHHCCCcEE
Confidence 99999976655555666543
No 67
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=96.58 E-value=0.0018 Score=61.13 Aligned_cols=93 Identities=17% Similarity=0.214 Sum_probs=71.5
Q ss_pred EeeCchHHHHHHHhh-cccEEEEEcCCcHHHHHHHHHHHCCCCCeeeeEEEcccceee---CCceeecccccCCCCCcEE
Q 011855 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFS---DGTYTKDLTVLGVDLAKVA 417 (476)
Q Consensus 342 V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~~ILd~LDP~~~lF~~RLyRe~C~~~---~g~yiKDLs~LGrdlskVV 417 (476)
...+||+.+||+.+. +.+.++|.|++...++..+++.++... +|...+..+..... ...+.+-+.+++.++++++
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~-~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i 170 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIAD-YFSVVIGGDSLPNKKPDPAPLLLACEKLGLDPEEML 170 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCcc-CccEEEcCCCCCCCCcChHHHHHHHHHcCCChhheE
Confidence 668999999999998 569999999999999999999998754 67765555443221 1235566677899999999
Q ss_pred EEECCchhhccCCCceee
Q 011855 418 IIDNSPQVFRLQVNNGIP 435 (476)
Q Consensus 418 IIDDsp~s~~~q~~NgIp 435 (476)
+|+|++.-.......|++
T Consensus 171 ~igD~~~Di~~a~~~g~~ 188 (226)
T PRK13222 171 FVGDSRNDIQAARAAGCP 188 (226)
T ss_pred EECCCHHHHHHHHHCCCc
Confidence 999998766554445553
No 68
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=96.50 E-value=0.0044 Score=57.38 Aligned_cols=94 Identities=13% Similarity=0.136 Sum_probs=66.8
Q ss_pred EeeCchHHHHHHHhh-cccEEEEEcCCcHHHHHHHHHHHCCCCCeeeeEEEcccce-eeCCc------------eeeccc
Q 011855 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCI-FSDGT------------YTKDLT 407 (476)
Q Consensus 342 V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~~ILd~LDP~~~lF~~RLyRe~C~-~~~g~------------yiKDLs 407 (476)
+.++||+.++|+++. +.+.++|.|++...+++.+++.+.... +|...+..+... ..... +.+-+.
T Consensus 79 ~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~-~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~~~ 157 (201)
T TIGR01491 79 ISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDY-VYSNELVFDEKGFIQPDGIVRVTFDNKGEAVERLKR 157 (201)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCe-EEEEEEEEcCCCeEecceeeEEccccHHHHHHHHHH
Confidence 678999999999998 579999999999999999999998664 666555432211 11111 111134
Q ss_pred ccCCCCCcEEEEECCchhhccCCCceeee
Q 011855 408 VLGVDLAKVAIIDNSPQVFRLQVNNGIPI 436 (476)
Q Consensus 408 ~LGrdlskVVIIDDsp~s~~~q~~NgIpI 436 (476)
.+|.+++++++|.|+..-...-...|+++
T Consensus 158 ~~~~~~~~~i~iGDs~~D~~~a~~ag~~~ 186 (201)
T TIGR01491 158 ELNPSLTETVAVGDSKNDLPMFEVADISI 186 (201)
T ss_pred HhCCCHHHEEEEcCCHhHHHHHHhcCCeE
Confidence 46888999999999986655444455544
No 69
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=96.45 E-value=0.0015 Score=67.45 Aligned_cols=95 Identities=15% Similarity=0.179 Sum_probs=65.0
Q ss_pred EeeCchHHHHHHHhh-cccEEEEEcCCcHHHHHHHHHHHCCCCCeeeeEEEccccee----------e--CCcee-eccc
Q 011855 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIF----------S--DGTYT-KDLT 407 (476)
Q Consensus 342 V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~~ILd~LDP~~~lF~~RLyRe~C~~----------~--~g~yi-KDLs 407 (476)
+.++||+.++|+.+. ..+.++|.|++...+++.+++.++... .+...+-.....+ . +...+ +=++
T Consensus 180 l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~-~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~~la~ 258 (322)
T PRK11133 180 LPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDA-AVANELEIMDGKLTGNVLGDIVDAQYKADTLTRLAQ 258 (322)
T ss_pred CCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCe-EEEeEEEEECCEEEeEecCccCCcccHHHHHHHHHH
Confidence 678999999999998 569999999999999999999987654 3333322111000 0 11111 2234
Q ss_pred ccCCCCCcEEEEECCchhhccCCCceeeec
Q 011855 408 VLGVDLAKVAIIDNSPQVFRLQVNNGIPIE 437 (476)
Q Consensus 408 ~LGrdlskVVIIDDsp~s~~~q~~NgIpI~ 437 (476)
.+|.+++++|.|-|+..-...-...|+.|-
T Consensus 259 ~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA 288 (322)
T PRK11133 259 EYEIPLAQTVAIGDGANDLPMIKAAGLGIA 288 (322)
T ss_pred HcCCChhhEEEEECCHHHHHHHHHCCCeEE
Confidence 678899999999999976655444555543
No 70
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=96.42 E-value=0.0031 Score=63.05 Aligned_cols=93 Identities=13% Similarity=0.145 Sum_probs=72.7
Q ss_pred EeeCchHHHHHHHhh-cccEEEEEcCCcHHHHHHHHHHHCCCCCeeeeEEEcccceeeC---CceeecccccCCCCCcEE
Q 011855 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKVA 417 (476)
Q Consensus 342 V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~~ILd~LDP~~~lF~~RLyRe~C~~~~---g~yiKDLs~LGrdlskVV 417 (476)
+..+||+.++|+++. +.+.++|.|++...++..+++.++-.+ +|...+..+.+.... ..|.+-+.++|.+++++|
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~-~f~~i~~~d~~~~~Kp~p~~~~~~~~~~g~~~~~~l 178 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGR-YFRWIIGGDTLPQKKPDPAALLFVMKMAGVPPSQSL 178 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHh-hCeEEEecCCCCCCCCCcHHHHHHHHHhCCChhHEE
Confidence 457899999999997 579999999999999999999987654 787766655433221 234566677899999999
Q ss_pred EEECCchhhccCCCceee
Q 011855 418 IIDNSPQVFRLQVNNGIP 435 (476)
Q Consensus 418 IIDDsp~s~~~q~~NgIp 435 (476)
+|+|++.-......+|+.
T Consensus 179 ~IGD~~~Di~aA~~aGi~ 196 (272)
T PRK13223 179 FVGDSRSDVLAAKAAGVQ 196 (272)
T ss_pred EECCCHHHHHHHHHCCCe
Confidence 999999777665566764
No 71
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=96.39 E-value=0.0046 Score=58.28 Aligned_cols=114 Identities=16% Similarity=0.133 Sum_probs=70.2
Q ss_pred CceEEEEecCcccccccc-cccCCCCceEEEEeccccceEEEeeCchHHHHHHHhh-cccEEEEEcCCcHHHHHHHHHHH
Q 011855 302 KSVTLVLDLDETLVHSTL-EYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDIL 379 (476)
Q Consensus 302 kk~tLVLDLDeTLVhSs~-~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~~ILd~L 379 (476)
+.+.+|+|+||||+.... .... + .....+.. |.+ .=++.+. +.++++|-|......+..+++.+
T Consensus 20 ~ikli~~D~Dgtl~~~~i~~~~~--~---------~~~~~~~~-~d~--~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~l 85 (183)
T PRK09484 20 NIRLLICDVDGVFSDGLIYMGNN--G---------EELKAFNV-RDG--YGIRCLLTSGIEVAIITGRKSKLVEDRMTTL 85 (183)
T ss_pred CceEEEEcCCeeeecCEEEEcCC--C---------CEEEEEec-cch--HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHc
Confidence 467999999999997531 1111 0 11111111 221 1233333 68999999999999999999998
Q ss_pred CCCCCeeeeEEEcccceeeCCceeecccccCCCCCcEEEEECCchhhccCCCceeee
Q 011855 380 DPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPI 436 (476)
Q Consensus 380 DP~~~lF~~RLyRe~C~~~~g~yiKDLs~LGrdlskVVIIDDsp~s~~~q~~NgIpI 436 (476)
.... +|. .+.-....+.+-+..+|.+++.++.|-|+..-...-...|+.+
T Consensus 86 gl~~-~f~------g~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~ 135 (183)
T PRK09484 86 GITH-LYQ------GQSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSV 135 (183)
T ss_pred CCce-eec------CCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeE
Confidence 7653 443 1111112334455677999999999999986554444445544
No 72
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=96.38 E-value=0.0052 Score=60.00 Aligned_cols=94 Identities=11% Similarity=0.084 Sum_probs=62.9
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEeccccceEEEeeCchHHHHHHHhh-cccEEEEEcCCcHHHHH--HHHHHHC
Q 011855 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAA--QLLDILD 380 (476)
Q Consensus 304 ~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~--~ILd~LD 380 (476)
..++||+||||.+.. ..-||+.++|++|. +.+.++|.|++.+..+. +.++.++
T Consensus 9 ~~~~~D~dG~l~~~~------------------------~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~g 64 (242)
T TIGR01459 9 DVFLLDLWGVIIDGN------------------------HTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLG 64 (242)
T ss_pred CEEEEecccccccCC------------------------ccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCC
Confidence 478999999997642 24699999999998 57999999999988776 7788887
Q ss_pred CCCCeeeeEEEcccceeeCCceeecccccCCCCCcEEEEECCc
Q 011855 381 PDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSP 423 (476)
Q Consensus 381 P~~~lF~~RLyRe~C~~~~g~yiKDLs~LGrdlskVVIIDDsp 423 (476)
....+|...+....... ..+..-++.+|...+++++|-|..
T Consensus 65 l~~~~~~~Ii~s~~~~~--~~l~~~~~~~~~~~~~~~~vGd~~ 105 (242)
T TIGR01459 65 INADLPEMIISSGEIAV--QMILESKKRFDIRNGIIYLLGHLE 105 (242)
T ss_pred CCccccceEEccHHHHH--HHHHhhhhhccCCCceEEEeCCcc
Confidence 65325666666443211 111111233444455566666644
No 73
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=96.36 E-value=0.0031 Score=63.64 Aligned_cols=93 Identities=15% Similarity=0.123 Sum_probs=56.3
Q ss_pred CCceEEEEecCcccccccccc----cCCCCceEEEEeccccceEEEeeCchHHHHHHHhh-cccEEEEEcCCcHHHHHHH
Q 011855 301 RKSVTLVLDLDETLVHSTLEY----CDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQL 375 (476)
Q Consensus 301 ~kk~tLVLDLDeTLVhSs~~~----~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~~I 375 (476)
.+++.+|||||||+++.+... .....|.- -.++.-........-||+.+||+++. +...++|.|+....+.+..
T Consensus 73 ~kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~-~~w~~wv~~~~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T 151 (266)
T TIGR01533 73 DKKYAIVLDLDETVLDNSPYQGYQVLNNKPFDP-ETWDKWVQAAQAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAAT 151 (266)
T ss_pred CCCCEEEEeCccccccChHHHHHHhcCCCcCCH-HHHHHHHHcCCCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHH
Confidence 457899999999999876221 11111100 00000001123556799999999997 6689999999886666644
Q ss_pred ---HHHHCCCCCeeeeEEEccc
Q 011855 376 ---LDILDPDGKLISRRVYRES 394 (476)
Q Consensus 376 ---Ld~LDP~~~lF~~RLyRe~ 394 (476)
|+.++.....+.+.+.|+.
T Consensus 152 ~~~Lkk~Gi~~~~~d~lllr~~ 173 (266)
T TIGR01533 152 LKNLKRFGFPQADEEHLLLKKD 173 (266)
T ss_pred HHHHHHcCcCCCCcceEEeCCC
Confidence 4444443323466777753
No 74
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=96.29 E-value=0.0028 Score=60.16 Aligned_cols=95 Identities=16% Similarity=0.167 Sum_probs=74.5
Q ss_pred EeeCchHHHHHHHhh-cccEEEEEcCCcHHHHHHHHHHHCCCC-CeeeeEEEcccceee---CCceeecccccCCC-CCc
Q 011855 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDG-KLISRRVYRESCIFS---DGTYTKDLTVLGVD-LAK 415 (476)
Q Consensus 342 V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~~ILd~LDP~~-~lF~~RLyRe~C~~~---~g~yiKDLs~LGrd-lsk 415 (476)
..+.||+.+||++|+ +.+.++|-|++...++..+++.++... .+|...+..+.-... +..|.+-+.++|.. +++
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~ 165 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTGVQDVQS 165 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCCCCCCCHHHHHHHHHHcCCCChhH
Confidence 468999999999997 679999999999999999999998652 588877776542211 23455667788876 799
Q ss_pred EEEEECCchhhccCCCceeee
Q 011855 416 VAIIDNSPQVFRLQVNNGIPI 436 (476)
Q Consensus 416 VVIIDDsp~s~~~q~~NgIpI 436 (476)
+++|+|++.-.......|++.
T Consensus 166 ~~~igD~~~Di~aa~~aG~~~ 186 (220)
T TIGR03351 166 VAVAGDTPNDLEAGINAGAGA 186 (220)
T ss_pred eEEeCCCHHHHHHHHHCCCCe
Confidence 999999997776665667765
No 75
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=96.27 E-value=0.0017 Score=61.28 Aligned_cols=99 Identities=18% Similarity=0.099 Sum_probs=70.6
Q ss_pred EEeeCchHHHHHHHhh-cccEEEEEcCCcHHH--HHHHHHHHCCCCCeeeeEEEcccceee---CCceeecccccCCCCC
Q 011855 341 YVKQRPHLKTFLERVA-EMFEVVIFTASQSIY--AAQLLDILDPDGKLISRRVYRESCIFS---DGTYTKDLTVLGVDLA 414 (476)
Q Consensus 341 ~V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~Y--A~~ILd~LDP~~~lF~~RLyRe~C~~~---~g~yiKDLs~LGrdls 414 (476)
.+.+.||+.++|++|. +.|.++|.|++...+ +...+..++.. .+|+..+..+..... ...|.+-++++|.+++
T Consensus 92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~-~~fd~v~~s~~~~~~KP~p~~~~~~~~~~g~~~~ 170 (211)
T TIGR02247 92 NTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIM-ALFDAVVESCLEGLRKPDPRIYQLMLERLGVAPE 170 (211)
T ss_pred ccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhH-hhCCEEEEeeecCCCCCCHHHHHHHHHHcCCCHH
Confidence 3567899999999998 469999999987654 32223323322 368877765544322 2356677788999999
Q ss_pred cEEEEECCchhhccCCCceeeecccc
Q 011855 415 KVAIIDNSPQVFRLQVNNGIPIESWF 440 (476)
Q Consensus 415 kVVIIDDsp~s~~~q~~NgIpI~~f~ 440 (476)
++++|||++.........|+....+.
T Consensus 171 ~~l~i~D~~~di~aA~~aG~~~i~v~ 196 (211)
T TIGR02247 171 ECVFLDDLGSNLKPAAALGITTIKVS 196 (211)
T ss_pred HeEEEcCCHHHHHHHHHcCCEEEEEC
Confidence 99999999988777667777765443
No 76
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=96.25 E-value=0.006 Score=60.28 Aligned_cols=98 Identities=12% Similarity=0.056 Sum_probs=75.8
Q ss_pred EeeCchHHHHHHHhh-cccEEEEEcCCcHHHHHHHHHHHCCCCCeeeeEEEcccceee---CCceeecccccCCC-CCcE
Q 011855 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFS---DGTYTKDLTVLGVD-LAKV 416 (476)
Q Consensus 342 V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~~ILd~LDP~~~lF~~RLyRe~C~~~---~g~yiKDLs~LGrd-lskV 416 (476)
+.+.||+.++|++|. +.+.++|-|++.+..+..+++.+...+-+|+.++..++.... ...|.+-++++|.. ++.+
T Consensus 100 ~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~~~~~~~~~KP~p~~~~~a~~~l~~~~~~e~ 179 (267)
T PRK13478 100 ATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVVTTDDVPAGRPYPWMALKNAIELGVYDVAAC 179 (267)
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEEcCCcCCCCCCChHHHHHHHHHcCCCCCcce
Confidence 567899999999997 579999999999999999999887665234677667664332 23566778888975 6899
Q ss_pred EEEECCchhhccCCCceeeeccc
Q 011855 417 AIIDNSPQVFRLQVNNGIPIESW 439 (476)
Q Consensus 417 VIIDDsp~s~~~q~~NgIpI~~f 439 (476)
|+|.|++.-+......|++....
T Consensus 180 l~IGDs~~Di~aA~~aG~~~i~v 202 (267)
T PRK13478 180 VKVDDTVPGIEEGLNAGMWTVGV 202 (267)
T ss_pred EEEcCcHHHHHHHHHCCCEEEEE
Confidence 99999998776666677665443
No 77
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=96.22 E-value=0.0024 Score=60.78 Aligned_cols=95 Identities=7% Similarity=0.065 Sum_probs=74.1
Q ss_pred EeeCchHHHHHHHhhcccEEEEEcCCcHHHHHHHHHHHCCCCCeee-eEEEcccceee---CCceeecccccCCCCCcEE
Q 011855 342 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLIS-RRVYRESCIFS---DGTYTKDLTVLGVDLAKVA 417 (476)
Q Consensus 342 V~lRPgl~eFLe~Lsk~YEIVIfTAs~~~YA~~ILd~LDP~~~lF~-~RLyRe~C~~~---~g~yiKDLs~LGrdlskVV 417 (476)
+...||+.++|+++. +.++|.|++.+.+++.+++.++... +|. ..+..++.... ...|.+-++++|..++++|
T Consensus 87 ~~~~~gv~~~L~~L~--~~~~ivTn~~~~~~~~~l~~~~l~~-~F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~p~~~l 163 (221)
T PRK10563 87 LEPIAGANALLESIT--VPMCVVSNGPVSKMQHSLGKTGMLH-YFPDKLFSGYDIQRWKPDPALMFHAAEAMNVNVENCI 163 (221)
T ss_pred CCcCCCHHHHHHHcC--CCEEEEeCCcHHHHHHHHHhcChHH-hCcceEeeHHhcCCCCCChHHHHHHHHHcCCCHHHeE
Confidence 567899999999994 8999999999999999999987765 775 45555443322 2356677788999999999
Q ss_pred EEECCchhhccCCCceeeeccc
Q 011855 418 IIDNSPQVFRLQVNNGIPIESW 439 (476)
Q Consensus 418 IIDDsp~s~~~q~~NgIpI~~f 439 (476)
+|+|++.........|+++.-+
T Consensus 164 ~igDs~~di~aA~~aG~~~i~~ 185 (221)
T PRK10563 164 LVDDSSAGAQSGIAAGMEVFYF 185 (221)
T ss_pred EEeCcHhhHHHHHHCCCEEEEE
Confidence 9999998776666677776543
No 78
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=96.20 E-value=0.016 Score=55.64 Aligned_cols=124 Identities=14% Similarity=0.096 Sum_probs=77.4
Q ss_pred EeeCchHHHHHHHhh-cccEEEEEcCCcHHHHHHHHHHHCCCCCeeeeEE--EcccceeeC-------------Cceeec
Q 011855 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRV--YRESCIFSD-------------GTYTKD 405 (476)
Q Consensus 342 V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~~ILd~LDP~~~lF~~RL--yRe~C~~~~-------------g~yiKD 405 (476)
+.++||+.+||+++. +.+.++|.|++...|++++++.+-+...++...+ ..+...... ....+-
T Consensus 73 ~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~~K~~~ 152 (219)
T PRK09552 73 AEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGLIPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCGCCKPSL 152 (219)
T ss_pred CCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHhCCcCcEEEeEEEecCCeeEEeccCCccccccccCCCchHHH
Confidence 688999999999998 5699999999999999999998722222332222 111111100 012234
Q ss_pred ccccCCCCCcEEEEECCchhhccCCCceeeeccccCCCCchHHHHHHHHHHhc-------cCCCCcHHHHHhhhCCC
Q 011855 406 LTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIESWFDDPSDCSLISLLPFLDIL-------ADAEDVRPIIAKTFGNK 475 (476)
Q Consensus 406 Ls~LGrdlskVVIIDDsp~s~~~q~~NgIpI~~f~gd~~D~eLl~LlpfLe~L-------~~~dDVR~~L~krf~~k 475 (476)
+..++....++|.|-|+..-.......|+.+.. + .| ..+++.. ....||..+|++.|..|
T Consensus 153 l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~------~-~l---~~~~~~~~~~~~~~~~f~ei~~~l~~~~~~~ 219 (219)
T PRK09552 153 IRKLSDTNDFHIVIGDSITDLEAAKQADKVFAR------D-FL---ITKCEELGIPYTPFETFHDVQTELKHLLEVK 219 (219)
T ss_pred HHHhccCCCCEEEEeCCHHHHHHHHHCCcceeH------H-HH---HHHHHHcCCCccccCCHHHHHHHHHHHhccC
Confidence 455677788999999999766555556664431 1 22 3333322 22456666677766543
No 79
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=96.20 E-value=0.0054 Score=61.88 Aligned_cols=97 Identities=12% Similarity=0.168 Sum_probs=71.7
Q ss_pred EeeCchHHHHHHHhh-cccEEEEEcCCcHHHHHHHHHHHCCC--CCeeeeEEEcccceee---CCceeecccccCCCCCc
Q 011855 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPD--GKLISRRVYRESCIFS---DGTYTKDLTVLGVDLAK 415 (476)
Q Consensus 342 V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~~ILd~LDP~--~~lF~~RLyRe~C~~~---~g~yiKDLs~LGrdlsk 415 (476)
+.+.||+.++|+++. +.+.++|.|++...++..+++.+.-. ..+|... ..+.+... ...|.+-+..+|.++++
T Consensus 143 ~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v-~~~~~~~~KP~p~~~~~a~~~~~~~p~~ 221 (286)
T PLN02779 143 LPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVF-AGDDVPKKKPDPDIYNLAAETLGVDPSR 221 (286)
T ss_pred CCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEE-eccccCCCCCCHHHHHHHHHHhCcChHH
Confidence 478999999999998 57999999999999999999877321 1223322 44443222 12456677888999999
Q ss_pred EEEEECCchhhccCCCceeeeccc
Q 011855 416 VAIIDNSPQVFRLQVNNGIPIESW 439 (476)
Q Consensus 416 VVIIDDsp~s~~~q~~NgIpI~~f 439 (476)
+|+|+|++.-+.....+|+.....
T Consensus 222 ~l~IGDs~~Di~aA~~aG~~~i~v 245 (286)
T PLN02779 222 CVVVEDSVIGLQAAKAAGMRCIVT 245 (286)
T ss_pred EEEEeCCHHhHHHHHHcCCEEEEE
Confidence 999999998777666677666554
No 80
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=96.18 E-value=0.0091 Score=58.11 Aligned_cols=85 Identities=14% Similarity=0.232 Sum_probs=63.2
Q ss_pred EeeCchHHHHHHHhh-cccEEEEEcCCcHHHHHHHHHHHCCCCCeeeeEEEcccceeeC---Cce----eec------cc
Q 011855 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTY----TKD------LT 407 (476)
Q Consensus 342 V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~~ILd~LDP~~~lF~~RLyRe~C~~~~---g~y----iKD------Ls 407 (476)
++++||+.+.++.+. ..+.++|.|+|...++++|.+.|..+. .+..++-.+.-.+.. |.. .|. ++
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~-~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~~~ 154 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDY-VVANELEIDDGKLTGRVVGPICDGEGKAKALRELAA 154 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCch-heeeEEEEeCCEEeceeeeeecCcchHHHHHHHHHH
Confidence 889999999999999 569999999999999999999999886 566666655411211 111 111 23
Q ss_pred ccCCCCCcEEEEECCchhhc
Q 011855 408 VLGVDLAKVAIIDNSPQVFR 427 (476)
Q Consensus 408 ~LGrdlskVVIIDDsp~s~~ 427 (476)
.+|.++++++-+=|+..-..
T Consensus 155 ~~g~~~~~~~a~gDs~nDlp 174 (212)
T COG0560 155 ELGIPLEETVAYGDSANDLP 174 (212)
T ss_pred HcCCCHHHeEEEcCchhhHH
Confidence 45888888999888886543
No 81
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=96.16 E-value=0.0049 Score=57.71 Aligned_cols=90 Identities=14% Similarity=0.097 Sum_probs=67.3
Q ss_pred eeCchHHHHHHHhhc-ccEEEEEcCCcHHHHHHHHHHHCCCCCeeeeEEEcccceeeC---CceeecccccCCCCCcEEE
Q 011855 343 KQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKVAI 418 (476)
Q Consensus 343 ~lRPgl~eFLe~Lsk-~YEIVIfTAs~~~YA~~ILd~LDP~~~lF~~RLyRe~C~~~~---g~yiKDLs~LGrdlskVVI 418 (476)
.+.||+.++|++|++ .+.++|.|++...+ ..+++.++-.+ +|...+..+.+.... ..|.+-++.+|.+++++|+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~-~~~l~~~~l~~-~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~~~~~~~ 182 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSRL-RGLLEALGLLE-YFDFVVTSYEVGAEKPDPKIFQEALERAGISPEEALH 182 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchhH-HHHHHHCCcHH-hcceEEeecccCCCCCCHHHHHHHHHHcCCChhHEEE
Confidence 568999999999985 69999999988764 77888876654 788887766554332 2466777888999999999
Q ss_pred EECCc-hhhccCCCcee
Q 011855 419 IDNSP-QVFRLQVNNGI 434 (476)
Q Consensus 419 IDDsp-~s~~~q~~NgI 434 (476)
|+|++ .-.......|+
T Consensus 183 IgD~~~~Di~~A~~aG~ 199 (203)
T TIGR02252 183 IGDSLRNDYQGARAAGW 199 (203)
T ss_pred ECCCchHHHHHHHHcCC
Confidence 99997 34443334444
No 82
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=96.15 E-value=0.0038 Score=57.19 Aligned_cols=92 Identities=15% Similarity=0.155 Sum_probs=69.2
Q ss_pred EeeCchHHHHHHHhh-cccEEEEEcCCcHHHHHHHHHHHCCCCCeeeeEEEcccceee---CCceeecccccCCCCCcEE
Q 011855 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFS---DGTYTKDLTVLGVDLAKVA 417 (476)
Q Consensus 342 V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~~ILd~LDP~~~lF~~RLyRe~C~~~---~g~yiKDLs~LGrdlskVV 417 (476)
..+.||+.++|++|. +.+.++|-|++. .+..+++.++... +|+..+..++-... ...|.+-+++++.+++++|
T Consensus 86 ~~~~pg~~~~L~~L~~~g~~~~i~s~~~--~~~~~l~~~~l~~-~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~v 162 (185)
T TIGR01990 86 ADVLPGIKNLLDDLKKNNIKIALASASK--NAPTVLEKLGLID-YFDAIVDPAEIKKGKPDPEIFLAAAEGLGVSPSECI 162 (185)
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCc--cHHHHHHhcCcHh-hCcEEEehhhcCCCCCChHHHHHHHHHcCCCHHHeE
Confidence 357899999999998 569999999764 3577888887764 78887765432211 2346677788899999999
Q ss_pred EEECCchhhccCCCceeee
Q 011855 418 IIDNSPQVFRLQVNNGIPI 436 (476)
Q Consensus 418 IIDDsp~s~~~q~~NgIpI 436 (476)
+|+|++.-+.....+|++.
T Consensus 163 ~vgD~~~di~aA~~aG~~~ 181 (185)
T TIGR01990 163 GIEDAQAGIEAIKAAGMFA 181 (185)
T ss_pred EEecCHHHHHHHHHcCCEE
Confidence 9999997776666667654
No 83
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=96.13 E-value=0.004 Score=61.02 Aligned_cols=95 Identities=12% Similarity=0.093 Sum_probs=70.2
Q ss_pred EeeCchHHHHHHHhh-cccEEEEEcCCcHHHHHHHHHHHC---CCCCeeeeEEEcccce-eeCCceeecccccCCCCCcE
Q 011855 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILD---PDGKLISRRVYRESCI-FSDGTYTKDLTVLGVDLAKV 416 (476)
Q Consensus 342 V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~~ILd~LD---P~~~lF~~RLyRe~C~-~~~g~yiKDLs~LGrdlskV 416 (476)
..+.|++.++|+++. +.+.++|+|++...+...+++..+ .. .+|+..+....+. .....|.+-+..+|.+++++
T Consensus 94 ~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~-~~f~~~fd~~~g~KP~p~~y~~i~~~lgv~p~e~ 172 (220)
T TIGR01691 94 SHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLT-PYFSGYFDTTVGLKTEAQSYVKIAGQLGSPPREI 172 (220)
T ss_pred cCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchh-hhcceEEEeCcccCCCHHHHHHHHHHhCcChhHE
Confidence 567899999999997 679999999999999999888763 22 2555444321111 11346778888899999999
Q ss_pred EEEECCchhhccCCCceeeec
Q 011855 417 AIIDNSPQVFRLQVNNGIPIE 437 (476)
Q Consensus 417 VIIDDsp~s~~~q~~NgIpI~ 437 (476)
++|+|++.-.......|+...
T Consensus 173 lfVgDs~~Di~AA~~AG~~ti 193 (220)
T TIGR01691 173 LFLSDIINELDAARKAGLHTG 193 (220)
T ss_pred EEEeCCHHHHHHHHHcCCEEE
Confidence 999999987766556666543
No 84
>PRK08238 hypothetical protein; Validated
Probab=96.12 E-value=0.0057 Score=66.50 Aligned_cols=77 Identities=14% Similarity=0.081 Sum_probs=51.8
Q ss_pred EeeCchHHHHHHHhh-cccEEEEEcCCcHHHHHHHHHHHCCCCCeeeeEEEcccceeeCC--ceeecccccCCCCCcEEE
Q 011855 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDG--TYTKDLTVLGVDLAKVAI 418 (476)
Q Consensus 342 V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~~ILd~LDP~~~lF~~RLyRe~C~~~~g--~yiKDLs~LGrdlskVVI 418 (476)
...+|++.++|+++. +.+.++|-|++.+.+++++++.++- |+..+..+......+ ...+-.+.++ .+.++.
T Consensus 71 lp~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGl----Fd~Vigsd~~~~~kg~~K~~~l~~~l~--~~~~~y 144 (479)
T PRK08238 71 LPYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGL----FDGVFASDGTTNLKGAAKAAALVEAFG--ERGFDY 144 (479)
T ss_pred CCCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC----CCEEEeCCCccccCCchHHHHHHHHhC--ccCeeE
Confidence 357899999999997 6799999999999999999999854 666665443221111 1111112233 244677
Q ss_pred EECCch
Q 011855 419 IDNSPQ 424 (476)
Q Consensus 419 IDDsp~ 424 (476)
+-|+..
T Consensus 145 vGDS~~ 150 (479)
T PRK08238 145 AGNSAA 150 (479)
T ss_pred ecCCHH
Confidence 777774
No 85
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=96.11 E-value=0.0075 Score=56.99 Aligned_cols=84 Identities=14% Similarity=0.133 Sum_probs=72.5
Q ss_pred EeeCchHHHHHHHhhcccEEEEEcCCcHHHHHHHHHHHCCCCCeeeeEEEcccceeeC---CceeecccccCCCCCcEEE
Q 011855 342 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSD---GTYTKDLTVLGVDLAKVAI 418 (476)
Q Consensus 342 V~lRPgl~eFLe~Lsk~YEIVIfTAs~~~YA~~ILd~LDP~~~lF~~RLyRe~C~~~~---g~yiKDLs~LGrdlskVVI 418 (476)
+...|++.++|+.+.+.|.++|.|.+...++...+..+... .+|+..++.+.....+ ..|..-++.+|.+++++++
T Consensus 98 ~~~~~~~~~~L~~l~~~~~l~ilTNg~~~~~~~~l~~~gl~-~~Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~~p~~~l~ 176 (229)
T COG1011 98 LPDYPEALEALKELGKKYKLGILTNGARPHQERKLRQLGLL-DYFDAVFISEDVGVAKPDPEIFEYALEKLGVPPEEALF 176 (229)
T ss_pred CccChhHHHHHHHHHhhccEEEEeCCChHHHHHHHHHcCCh-hhhheEEEecccccCCCCcHHHHHHHHHcCCCcceEEE
Confidence 67789999999999977999999999999999999999844 5899999988776443 3567778889999999999
Q ss_pred EECCchhh
Q 011855 419 IDNSPQVF 426 (476)
Q Consensus 419 IDDsp~s~ 426 (476)
|||+...-
T Consensus 177 VgD~~~~d 184 (229)
T COG1011 177 VGDSLEND 184 (229)
T ss_pred ECCChhhh
Confidence 99999765
No 86
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=95.94 E-value=0.013 Score=54.99 Aligned_cols=81 Identities=16% Similarity=0.181 Sum_probs=64.9
Q ss_pred eCchHHHHHHHhh-cccEEEEEcCCcHHHHHHHHHHHCCCCCeeeeEEEcccceee--CCceeecccccCCCCCcEEEEE
Q 011855 344 QRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFS--DGTYTKDLTVLGVDLAKVAIID 420 (476)
Q Consensus 344 lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~~ILd~LDP~~~lF~~RLyRe~C~~~--~g~yiKDLs~LGrdlskVVIID 420 (476)
..|+..++|+.|. +.+.++|.|++.+.+++.+++.++-.. +|+..+..++.... ...+.+-++.+|.+++++|+|.
T Consensus 107 ~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~-~f~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~i~vG 185 (197)
T TIGR01548 107 TLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEI-LFPVQIWMEDCPPKPNPEPLILAAKALGVEACHAAMVG 185 (197)
T ss_pred cccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchh-hCCEEEeecCCCCCcCHHHHHHHHHHhCcCcccEEEEe
Confidence 4456699999998 469999999999999999999998764 88888876654321 2245666778899999999999
Q ss_pred CCchh
Q 011855 421 NSPQV 425 (476)
Q Consensus 421 Dsp~s 425 (476)
|++.-
T Consensus 186 D~~~D 190 (197)
T TIGR01548 186 DTVDD 190 (197)
T ss_pred CCHHH
Confidence 99853
No 87
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=95.78 E-value=0.013 Score=52.35 Aligned_cols=82 Identities=12% Similarity=0.058 Sum_probs=63.7
Q ss_pred EeeCchHHHHHHHhh-cccEEEEEcCCcHHHHHHHHHHHCCCCCeeeeEEEcccceee--CCceeecccccCCCCCcEEE
Q 011855 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFS--DGTYTKDLTVLGVDLAKVAI 418 (476)
Q Consensus 342 V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~~ILd~LDP~~~lF~~RLyRe~C~~~--~g~yiKDLs~LGrdlskVVI 418 (476)
....||+.++|+++. +.+.++|.|++.+..+..+++.+ . ..+|...+..++.... ...|.+-++++|.++ ++++
T Consensus 63 ~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l-~~~f~~i~~~~~~~~Kp~~~~~~~~~~~~~~~~-~~l~ 139 (154)
T TIGR01549 63 EAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-L-GDYFDLILGSDEFGAKPEPEIFLAALESLGLPP-EVLH 139 (154)
T ss_pred heeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-H-HhcCcEEEecCCCCCCcCHHHHHHHHHHcCCCC-CEEE
Confidence 445699999999996 67999999999999999999996 2 3478777777665411 224566677888888 9999
Q ss_pred EECCchhh
Q 011855 419 IDNSPQVF 426 (476)
Q Consensus 419 IDDsp~s~ 426 (476)
|.|++.-.
T Consensus 140 iGDs~~Di 147 (154)
T TIGR01549 140 VGDNLNDI 147 (154)
T ss_pred EeCCHHHH
Confidence 99997543
No 88
>PLN02811 hydrolase
Probab=95.77 E-value=0.0074 Score=57.85 Aligned_cols=97 Identities=13% Similarity=0.114 Sum_probs=70.5
Q ss_pred EeeCchHHHHHHHhh-cccEEEEEcCCcHHHHHH-HHHHHCCCCCeeeeEEEcc--cceee---CCceeecccccC---C
Q 011855 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQ-LLDILDPDGKLISRRVYRE--SCIFS---DGTYTKDLTVLG---V 411 (476)
Q Consensus 342 V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~~-ILd~LDP~~~lF~~RLyRe--~C~~~---~g~yiKDLs~LG---r 411 (476)
+.+.||+.++|+.|+ ..+.++|-|++.+.+... +++..... .+|...++.+ ++... +..|.+-+..+| .
T Consensus 77 ~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~-~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~ 155 (220)
T PLN02811 77 SDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELF-SLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDGPV 155 (220)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHH-hhCCEEEECChhhccCCCCCcHHHHHHHHHhCCCCC
Confidence 456899999999998 569999999998876554 33332222 3788888877 54332 335666677775 8
Q ss_pred CCCcEEEEECCchhhccCCCceeeeccc
Q 011855 412 DLAKVAIIDNSPQVFRLQVNNGIPIESW 439 (476)
Q Consensus 412 dlskVVIIDDsp~s~~~q~~NgIpI~~f 439 (476)
.++.+|+|+|++.-.......|++....
T Consensus 156 ~~~~~v~IgDs~~di~aA~~aG~~~i~v 183 (220)
T PLN02811 156 DPGKVLVFEDAPSGVEAAKNAGMSVVMV 183 (220)
T ss_pred CccceEEEeccHhhHHHHHHCCCeEEEE
Confidence 8999999999998776666677666544
No 89
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=95.51 E-value=0.019 Score=68.00 Aligned_cols=97 Identities=10% Similarity=0.099 Sum_probs=79.4
Q ss_pred eCchHHHHHHHhh-cccEEEEEcCCcHHHHHHHHHHHCCCCCeeeeEEEcccceee---CCceeecccccCCCCCcEEEE
Q 011855 344 QRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFS---DGTYTKDLTVLGVDLAKVAII 419 (476)
Q Consensus 344 lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~~ILd~LDP~~~lF~~RLyRe~C~~~---~g~yiKDLs~LGrdlskVVII 419 (476)
..||+.++|++|. +.|.++|.|++...+++.+++.+.-...+|+..+..+.+... +..|.+-++++|.+++++|+|
T Consensus 162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~lgv~p~e~v~I 241 (1057)
T PLN02919 162 GFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDIFLAAAKILGVPTSECVVI 241 (1057)
T ss_pred cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECcccccCCCCHHHHHHHHHHcCcCcccEEEE
Confidence 5899999999998 679999999999999999999988654579988887776533 235677788899999999999
Q ss_pred ECCchhhccCCCceeeecccc
Q 011855 420 DNSPQVFRLQVNNGIPIESWF 440 (476)
Q Consensus 420 DDsp~s~~~q~~NgIpI~~f~ 440 (476)
+|++.-+......|+..-...
T Consensus 242 gDs~~Di~AA~~aGm~~I~v~ 262 (1057)
T PLN02919 242 EDALAGVQAARAAGMRCIAVT 262 (1057)
T ss_pred cCCHHHHHHHHHcCCEEEEEC
Confidence 999987766666776655443
No 90
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=95.38 E-value=0.05 Score=53.31 Aligned_cols=58 Identities=31% Similarity=0.339 Sum_probs=50.7
Q ss_pred ceEEEEecCcccccccccccCCCCceEEEEeccccceEEEeeCchHHHHHHHhh-cccEEEEEcCCcHHHHHHHHHHHCC
Q 011855 303 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDP 381 (476)
Q Consensus 303 k~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~~ILd~LDP 381 (476)
.+.+++||||||+..... .+|...+.|+++. +.+.++|-|......+.++++.|..
T Consensus 3 ~kli~~DlDGTLl~~~~~-----------------------i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~ 59 (264)
T COG0561 3 IKLLAFDLDGTLLDSNKT-----------------------ISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGL 59 (264)
T ss_pred eeEEEEcCCCCccCCCCc-----------------------cCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCC
Confidence 578999999999976421 5889999999885 8899999999999999999999998
Q ss_pred CC
Q 011855 382 DG 383 (476)
Q Consensus 382 ~~ 383 (476)
.+
T Consensus 60 ~~ 61 (264)
T COG0561 60 DG 61 (264)
T ss_pred Cc
Confidence 86
No 91
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=95.27 E-value=0.017 Score=61.98 Aligned_cols=92 Identities=13% Similarity=0.169 Sum_probs=70.0
Q ss_pred EeeCchHHHHHHHhh-cccEEEEEcCCcHHHHHHHHHHHCCCCCeeeeEEEccccee--eCCceeecccccCCCCCcEEE
Q 011855 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIF--SDGTYTKDLTVLGVDLAKVAI 418 (476)
Q Consensus 342 V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~~ILd~LDP~~~lF~~RLyRe~C~~--~~g~yiKDLs~LGrdlskVVI 418 (476)
+.++||+.++|+++. +.+.+.|.|++.+.++..+++.++-.. ||...+..+.... .+..|.+-+..+ +++++|+
T Consensus 329 ~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~-~f~~i~~~d~v~~~~kP~~~~~al~~l--~~~~~v~ 405 (459)
T PRK06698 329 GALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQ-WVTETFSIEQINSLNKSDLVKSILNKY--DIKEAAV 405 (459)
T ss_pred CCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHh-hcceeEecCCCCCCCCcHHHHHHHHhc--CcceEEE
Confidence 567899999999997 679999999999999999999988765 8888877665421 122344444444 3588999
Q ss_pred EECCchhhccCCCceeee
Q 011855 419 IDNSPQVFRLQVNNGIPI 436 (476)
Q Consensus 419 IDDsp~s~~~q~~NgIpI 436 (476)
|.|++.-+......|+..
T Consensus 406 VGDs~~Di~aAk~AG~~~ 423 (459)
T PRK06698 406 VGDRLSDINAAKDNGLIA 423 (459)
T ss_pred EeCCHHHHHHHHHCCCeE
Confidence 999997776655666554
No 92
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=95.15 E-value=0.052 Score=53.89 Aligned_cols=57 Identities=21% Similarity=0.171 Sum_probs=47.0
Q ss_pred ceEEEEecCcccccccccccCCCCceEEEEeccccceEEEeeCchHHHHHHHhhc-ccEEEEEcCCcHHHHHHHHHHHCC
Q 011855 303 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDP 381 (476)
Q Consensus 303 k~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Lsk-~YEIVIfTAs~~~YA~~ILd~LDP 381 (476)
.+.+++||||||+.... ...|...+.|+++.+ .+.++|-|......+..+++.++.
T Consensus 4 ~kli~~DlDGTLl~~~~-----------------------~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l 60 (273)
T PRK00192 4 KLLVFTDLDGTLLDHHT-----------------------YSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGL 60 (273)
T ss_pred ceEEEEcCcccCcCCCC-----------------------cCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCC
Confidence 46899999999996421 135778899999985 699999999999999999999875
Q ss_pred C
Q 011855 382 D 382 (476)
Q Consensus 382 ~ 382 (476)
.
T Consensus 61 ~ 61 (273)
T PRK00192 61 E 61 (273)
T ss_pred C
Confidence 5
No 93
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=95.07 E-value=0.053 Score=50.87 Aligned_cols=54 Identities=28% Similarity=0.284 Sum_probs=45.0
Q ss_pred EEEecCcccccccccccCCCCceEEEEeccccceEEEeeCchHHHHHHHhh-cccEEEEEcCCcHHHHHHHHHHHCCC
Q 011855 306 LVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPD 382 (476)
Q Consensus 306 LVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~~ILd~LDP~ 382 (476)
|++||||||+++... .-|...+.|+++. +...++|.|.-....+..+++.+.-.
T Consensus 1 i~~DlDGTLl~~~~~-----------------------i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~ 55 (254)
T PF08282_consen 1 IFSDLDGTLLNSDGK-----------------------ISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGID 55 (254)
T ss_dssp EEEECCTTTCSTTSS-----------------------SCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHC
T ss_pred cEEEECCceecCCCe-----------------------eCHHHHHHHHhhcccceEEEEEccCcccccccccccccch
Confidence 689999999985321 3578889999888 78999999999999999999987644
No 94
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=94.99 E-value=0.041 Score=51.90 Aligned_cols=114 Identities=12% Similarity=0.127 Sum_probs=72.0
Q ss_pred CceEEEEecCcccccccccccCCCCceEEEEeccccc-eEEEeeCchHHHHHHHh-hcccEEEEEcCCcHHHHHHHHHHH
Q 011855 302 KSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEH-TVYVKQRPHLKTFLERV-AEMFEVVIFTASQSIYAAQLLDIL 379 (476)
Q Consensus 302 kk~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~-~~~V~lRPgl~eFLe~L-sk~YEIVIfTAs~~~YA~~ILd~L 379 (476)
.-+++|||.||+|-.-+.. ++..+. ..-+..|-+.- ++.| .+.+.+.|.|+....+++.+++.+
T Consensus 6 ~i~~~v~d~dGv~tdg~~~------------~~~~g~~~~~~~~~D~~~--~~~L~~~Gi~laIiT~k~~~~~~~~l~~l 71 (169)
T TIGR02726 6 NIKLVILDVDGVMTDGRIV------------INDEGIESRNFDIKDGMG--VIVLQLCGIDVAIITSKKSGAVRHRAEEL 71 (169)
T ss_pred cCeEEEEeCceeeECCeEE------------EcCCCcEEEEEecchHHH--HHHHHHCCCEEEEEECCCcHHHHHHHHHC
Confidence 3568999999999765411 111111 12234455544 2233 367999999999999999999999
Q ss_pred CCCCCeeeeEEEcccceeeCCceeecccccCCCCCcEEEEECCchhhccCCCceeee
Q 011855 380 DPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPI 436 (476)
Q Consensus 380 DP~~~lF~~RLyRe~C~~~~g~yiKDLs~LGrdlskVVIIDDsp~s~~~q~~NgIpI 436 (476)
.-.. +|... ......+.+-+..+|.++++++.|-|++.-.......|+.+
T Consensus 72 gi~~-~f~~~------kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~ 121 (169)
T TIGR02726 72 KIKR-FHEGI------KKKTEPYAQMLEEMNISDAEVCYVGDDLVDLSMMKRVGLAV 121 (169)
T ss_pred CCcE-EEecC------CCCHHHHHHHHHHcCcCHHHEEEECCCHHHHHHHHHCCCeE
Confidence 7763 55421 01112334445667888999999999986554333344433
No 95
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=94.89 E-value=0.085 Score=52.33 Aligned_cols=59 Identities=19% Similarity=0.255 Sum_probs=46.4
Q ss_pred CCceEEEEecCcccccccccccCCCCceEEEEeccccceEEEeeCchHHHHHHHhh-cccEEEEEcCCcHHHHHHHHHHH
Q 011855 301 RKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDIL 379 (476)
Q Consensus 301 ~kk~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~~ILd~L 379 (476)
+.++.+++||||||++... ..-|-..+-|+++. +...++|.|.-....+.++++.|
T Consensus 5 ~~~~lI~~DlDGTLL~~~~-----------------------~i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l 61 (271)
T PRK03669 5 QDPLLIFTDLDGTLLDSHT-----------------------YDWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTL 61 (271)
T ss_pred CCCeEEEEeCccCCcCCCC-----------------------cCcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHh
Confidence 4467999999999997521 11345667788887 56999999999999999999998
Q ss_pred CCC
Q 011855 380 DPD 382 (476)
Q Consensus 380 DP~ 382 (476)
+..
T Consensus 62 ~~~ 64 (271)
T PRK03669 62 GLQ 64 (271)
T ss_pred CCC
Confidence 764
No 96
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=94.76 E-value=0.045 Score=50.95 Aligned_cols=106 Identities=20% Similarity=0.255 Sum_probs=55.5
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEeccccceEEEeeCchHHHHHHHhh-cccEEEEEcCCc---H----------
Q 011855 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQ---S---------- 369 (476)
Q Consensus 304 ~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Ls-k~YEIVIfTAs~---~---------- 369 (476)
+++.|||||||+....... | . ....=+..+-|++.+-|+++. +.|.|||+|... +
T Consensus 1 Kia~fD~DgTLi~~~s~~~----f------~-~~~~D~~~~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~ 69 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKSGKK----F------P-KDPDDWKFFPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENF 69 (159)
T ss_dssp SEEEE-SCTTTEE-STSTT----S--------SSTCGGEEC-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHH
T ss_pred CEEEEeCCCCccCCCCCCc----C------c-CCHHHhhhcchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHH
Confidence 4789999999998753211 0 0 000112456788999999998 579999999752 1
Q ss_pred -HHHHHHHHHHCCCCCeeeeEEE---cccceee-CCceeeccccc----CCCCCcEEEEECCch
Q 011855 370 -IYAAQLLDILDPDGKLISRRVY---RESCIFS-DGTYTKDLTVL----GVDLAKVAIIDNSPQ 424 (476)
Q Consensus 370 -~YA~~ILd~LDP~~~lF~~RLy---Re~C~~~-~g~yiKDLs~L----GrdlskVVIIDDsp~ 424 (476)
...+.+++.|+- .+ ..++ .+.|..- .|.+..=++.+ ..|+++.++|=|++.
T Consensus 70 ~~ki~~il~~l~i---p~-~~~~a~~~d~~RKP~~GM~~~~~~~~~~~~~id~~~Sf~VGDaag 129 (159)
T PF08645_consen 70 HEKIENILKELGI---PI-QVYAAPHKDPCRKPNPGMWEFALKDYNDGVEIDLANSFYVGDAAG 129 (159)
T ss_dssp HHHHHHHHHHCTS----E-EEEECGCSSTTSTTSSHHHHHHCCCTSTT--S-CCC-EEEESSCH
T ss_pred HHHHHHHHHHcCC---ce-EEEecCCCCCCCCCchhHHHHHHHhccccccccccceEEEeccCC
Confidence 233345555532 22 2222 2223211 23333323333 358899999998753
No 97
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=94.69 E-value=0.065 Score=46.15 Aligned_cols=50 Identities=24% Similarity=0.267 Sum_probs=36.3
Q ss_pred EEEecCcccccccccccCCCCceEEEEeccccceEEEeeCchHHHHHHHhhc-ccEEEEEcCCcHHHHHHHHHHH
Q 011855 306 LVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDIL 379 (476)
Q Consensus 306 LVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Lsk-~YEIVIfTAs~~~YA~~ILd~L 379 (476)
++||+||||.+.. ..=||+.+||++|.+ ...+++.|.+...-...+.++|
T Consensus 1 ~l~D~dGvl~~g~------------------------~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L 51 (101)
T PF13344_consen 1 FLFDLDGVLYNGN------------------------EPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKL 51 (101)
T ss_dssp EEEESTTTSEETT------------------------EE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHH
T ss_pred CEEeCccEeEeCC------------------------CcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHH
Confidence 5899999998642 125999999999995 5999999999855444444444
No 98
>PTZ00445 p36-lilke protein; Provisional
Probab=94.66 E-value=0.043 Score=54.11 Aligned_cols=128 Identities=16% Similarity=0.174 Sum_probs=78.2
Q ss_pred CCCceEEEEecCccccc--cc--ccccCCCCceEEEEeccccceEEEeeCchHHHHHHHhh-cccEEEEEcCCcHHH---
Q 011855 300 GRKSVTLVLDLDETLVH--ST--LEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIY--- 371 (476)
Q Consensus 300 ~~kk~tLVLDLDeTLVh--Ss--~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~Y--- 371 (476)
..+-+.+++|||.|||- |. |.+. +....+.-..||.+..++++|. ..+.|+|-|-+.+.-
T Consensus 40 ~~GIk~Va~D~DnTlI~~HsgG~~~~~------------~~~~~~~~~~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~ 107 (219)
T PTZ00445 40 ECGIKVIASDFDLTMITKHSGGYIDPD------------NDDIRVLTSVTPDFKILGKRLKNSNIKISVVTFSDKELIPS 107 (219)
T ss_pred HcCCeEEEecchhhhhhhhcccccCCC------------cchhhhhccCCHHHHHHHHHHHHCCCeEEEEEccchhhccc
Confidence 45667999999999975 32 1111 0112234557999999999998 579999999988754
Q ss_pred ------------HHHHHHHHCCCCCeeee------EEEcccceee--------CCc--e--eecccccCCCCCcEEEEEC
Q 011855 372 ------------AAQLLDILDPDGKLISR------RVYRESCIFS--------DGT--Y--TKDLTVLGVDLAKVAIIDN 421 (476)
Q Consensus 372 ------------A~~ILd~LDP~~~lF~~------RLyRe~C~~~--------~g~--y--iKDLs~LGrdlskVVIIDD 421 (476)
+...|+.=.-.-+ +.. +++.+.-.+. .+. | .+=+++.|.+++.+++|||
T Consensus 108 ~~~~~~Isg~~li~~~lk~s~~~~~-i~~~~~yyp~~w~~p~~y~~~gl~KPdp~iK~yHle~ll~~~gl~peE~LFIDD 186 (219)
T PTZ00445 108 ENRPRYISGDRMVEAALKKSKCDFK-IKKVYAYYPKFWQEPSDYRPLGLDAPMPLDKSYHLKQVCSDFNVNPDEILFIDD 186 (219)
T ss_pred cCCcceechHHHHHHHHHhcCccce-eeeeeeeCCcccCChhhhhhhcccCCCccchHHHHHHHHHHcCCCHHHeEeecC
Confidence 4444443211111 111 1122211111 112 3 3445667999999999999
Q ss_pred CchhhccCCCceeeecccc
Q 011855 422 SPQVFRLQVNNGIPIESWF 440 (476)
Q Consensus 422 sp~s~~~q~~NgIpI~~f~ 440 (476)
++..+.....-|+...-+.
T Consensus 187 ~~~NVeaA~~lGi~ai~f~ 205 (219)
T PTZ00445 187 DMNNCKNALKEGYIALHVT 205 (219)
T ss_pred CHHHHHHHHHCCCEEEEcC
Confidence 9998876666666655554
No 99
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=94.54 E-value=0.055 Score=51.95 Aligned_cols=126 Identities=18% Similarity=0.266 Sum_probs=83.2
Q ss_pred ceEEEEecCcccccccccccCCCCceEEEEeccccceEEEeeCchHHHHHHHhh-cccEEEEEcCCc------------H
Q 011855 303 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQ------------S 369 (476)
Q Consensus 303 k~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Ls-k~YEIVIfTAs~------------~ 369 (476)
.+.|+||.||||.--.. ++. .... -..+.||+.+-|..+. ..|.+||+|... .
T Consensus 5 ~k~lflDRDGtin~d~~------~yv-----~~~~---~~~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~ 70 (181)
T COG0241 5 QKALFLDRDGTINIDKG------DYV-----DSLD---DFQFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFD 70 (181)
T ss_pred CcEEEEcCCCceecCCC------ccc-----CcHH---HhccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHH
Confidence 57999999999963211 010 0000 1456899999999997 569999999943 3
Q ss_pred HHHHHHHHHHCCCCCeeeeEEEccc-----ceee---CCceeecccccCCCCCcEEEEECCchhhccCCCc---eeeecc
Q 011855 370 IYAAQLLDILDPDGKLISRRVYRES-----CIFS---DGTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNN---GIPIES 438 (476)
Q Consensus 370 ~YA~~ILd~LDP~~~lF~~RLyRe~-----C~~~---~g~yiKDLs~LGrdlskVVIIDDsp~s~~~q~~N---gIpI~~ 438 (476)
.+-+.++..|--.|.-|+.+++..| |.+. .|.+..-+...+.|+++.++|=|+..-..+.... ++.+..
T Consensus 71 ~~~~~m~~~l~~~gv~id~i~~Cph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~~~~~~~ 150 (181)
T COG0241 71 KLHNKMLKILASQGVKIDGILYCPHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIKGVLVLT 150 (181)
T ss_pred HHHHHHHHHHHHcCCccceEEECCCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCCceEEEc
Confidence 3444577777777767999999544 5443 2455555666779999999999997544322222 555555
Q ss_pred ccCC
Q 011855 439 WFDD 442 (476)
Q Consensus 439 f~gd 442 (476)
|.+.
T Consensus 151 ~~~~ 154 (181)
T COG0241 151 GIGV 154 (181)
T ss_pred Cccc
Confidence 5543
No 100
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=94.49 E-value=0.0098 Score=54.29 Aligned_cols=77 Identities=13% Similarity=0.099 Sum_probs=62.5
Q ss_pred EeeCchHHHHHHHhhcccEEEEEcCCcHHHHHHHHHHHCCCCCeeeeEEEcccceee---CCceeecccccCCCCCcEEE
Q 011855 342 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFS---DGTYTKDLTVLGVDLAKVAI 418 (476)
Q Consensus 342 V~lRPgl~eFLe~Lsk~YEIVIfTAs~~~YA~~ILd~LDP~~~lF~~RLyRe~C~~~---~g~yiKDLs~LGrdlskVVI 418 (476)
+..+||+.++|+. ++|.|++.+.+...+++.+.... +|+..+..+..... ...|.+-++++|.+++++++
T Consensus 89 ~~~~~g~~~~L~~------~~i~Tn~~~~~~~~~l~~~~l~~-~fd~v~~~~~~~~~KP~p~~f~~~~~~~~~~p~~~l~ 161 (175)
T TIGR01493 89 LPPWPDSAAALAR------VAILSNASHWAFDQFAQQAGLPW-YFDRAFSVDTVRAYKPDPVVYELVFDTVGLPPDRVLM 161 (175)
T ss_pred CCCCCchHHHHHH------HhhhhCCCHHHHHHHHHHCCCHH-HHhhhccHhhcCCCCCCHHHHHHHHHHHCCCHHHeEe
Confidence 5679999999994 78999999999999999987654 78887776654333 23567788889999999999
Q ss_pred EECCchh
Q 011855 419 IDNSPQV 425 (476)
Q Consensus 419 IDDsp~s 425 (476)
|+|++.-
T Consensus 162 vgD~~~D 168 (175)
T TIGR01493 162 VAAHQWD 168 (175)
T ss_pred EecChhh
Confidence 9999743
No 101
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=94.41 E-value=0.11 Score=50.92 Aligned_cols=57 Identities=19% Similarity=0.211 Sum_probs=46.0
Q ss_pred ceEEEEecCcccccccccccCCCCceEEEEeccccceEEEeeCchHHHHHHHhh-cccEEEEEcCCcHHHHHHHHHHHCC
Q 011855 303 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDP 381 (476)
Q Consensus 303 k~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~~ILd~LDP 381 (476)
.+.+++||||||++... .+-|...+-|+++. +.+.++|-|.-....+.++++.+..
T Consensus 3 ~kli~~DlDGTLl~~~~-----------------------~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~ 59 (270)
T PRK10513 3 IKLIAIDMDGTLLLPDH-----------------------TISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHM 59 (270)
T ss_pred eEEEEEecCCcCcCCCC-----------------------ccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCC
Confidence 46899999999997521 13466778888888 5699999999999999999999876
Q ss_pred C
Q 011855 382 D 382 (476)
Q Consensus 382 ~ 382 (476)
.
T Consensus 60 ~ 60 (270)
T PRK10513 60 E 60 (270)
T ss_pred C
Confidence 4
No 102
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=94.37 E-value=0.11 Score=49.31 Aligned_cols=57 Identities=16% Similarity=0.230 Sum_probs=46.8
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEeccccceEEEeeCchHHHHHHHhh-cccEEEEEcCCcHHHHHHHHHHHCCC
Q 011855 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPD 382 (476)
Q Consensus 304 ~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~~ILd~LDP~ 382 (476)
+.+++||||||+... -.+.|...+-|+++. +.+.++|.|......+.++++.|+..
T Consensus 2 k~v~~DlDGTLl~~~-----------------------~~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~ 58 (215)
T TIGR01487 2 KLVAIDIDGTLTEPN-----------------------RMISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTS 58 (215)
T ss_pred cEEEEecCCCcCCCC-----------------------cccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCC
Confidence 478999999998531 024678888899998 56999999999999999999999876
Q ss_pred C
Q 011855 383 G 383 (476)
Q Consensus 383 ~ 383 (476)
+
T Consensus 59 ~ 59 (215)
T TIGR01487 59 G 59 (215)
T ss_pred C
Confidence 4
No 103
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=94.34 E-value=0.11 Score=50.63 Aligned_cols=54 Identities=19% Similarity=0.218 Sum_probs=43.5
Q ss_pred EEEEecCcccccccccccCCCCceEEEEeccccceEEEeeCchHHHHHHHhh-cccEEEEEcCCcHHHHHHHHHHHCCC
Q 011855 305 TLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPD 382 (476)
Q Consensus 305 tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~~ILd~LDP~ 382 (476)
++++||||||++... .-|...++|+++. +...+++.|.-+...+..+++.+...
T Consensus 1 li~~DlDGTLl~~~~------------------------~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 1 VIFTDLDGTLLPPGY------------------------EPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred CEEEeCCCCCcCCCC------------------------CchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 368999999998421 1356889999998 56999999999999888899888754
No 104
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=94.33 E-value=0.078 Score=50.75 Aligned_cols=94 Identities=9% Similarity=0.072 Sum_probs=61.2
Q ss_pred EEeeCchHHHHHHHhhc-ccEEEEEcCCcHHHHHHHHHHHCCCCCeeeeEEEcc--cceee-C--Cc----------eee
Q 011855 341 YVKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRE--SCIFS-D--GT----------YTK 404 (476)
Q Consensus 341 ~V~lRPgl~eFLe~Lsk-~YEIVIfTAs~~~YA~~ILd~LDP~~~lF~~RLyRe--~C~~~-~--g~----------yiK 404 (476)
.+.+|||+.+||+++.+ .+.++|.|++...|++++++.+.+...++..++.-. ..... + .. ..+
T Consensus 68 ~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~~ 147 (214)
T TIGR03333 68 TAEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKPS 147 (214)
T ss_pred cCcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeCCCCCccccccCCCCCHHH
Confidence 37899999999999995 699999999999999999999855443443333211 11110 0 00 012
Q ss_pred cccccCCCCCcEEEEECCchhhccCCCcee
Q 011855 405 DLTVLGVDLAKVAIIDNSPQVFRLQVNNGI 434 (476)
Q Consensus 405 DLs~LGrdlskVVIIDDsp~s~~~q~~NgI 434 (476)
-++.++....++|.|-|+..-+......++
T Consensus 148 ~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~ 177 (214)
T TIGR03333 148 LIRKLSEPNDYHIVIGDSVTDVEAAKQSDL 177 (214)
T ss_pred HHHHHhhcCCcEEEEeCCHHHHHHHHhCCe
Confidence 233345567789999999976644333343
No 105
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=94.22 E-value=0.15 Score=49.79 Aligned_cols=58 Identities=24% Similarity=0.295 Sum_probs=43.2
Q ss_pred ceEEEEecCcccccccccccCCCCceEEEEeccccceEEEeeCchHHHHHHHhh-cccEEEEEcCCcHHHHHHHHHHHCC
Q 011855 303 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDP 381 (476)
Q Consensus 303 k~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~~ILd~LDP 381 (476)
.+++++||||||+.... .+.|...+-|+++. +...++|-|.-....+.++++.|..
T Consensus 3 ~kli~~DlDGTLl~~~~-----------------------~i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l~~ 59 (272)
T PRK10530 3 YRVIALDLDGTLLTPKK-----------------------TILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQALAL 59 (272)
T ss_pred ccEEEEeCCCceECCCC-----------------------ccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCC
Confidence 35899999999996531 13455667777777 5688888888888888888888876
Q ss_pred CC
Q 011855 382 DG 383 (476)
Q Consensus 382 ~~ 383 (476)
..
T Consensus 60 ~~ 61 (272)
T PRK10530 60 DT 61 (272)
T ss_pred CC
Confidence 53
No 106
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=94.07 E-value=0.19 Score=47.87 Aligned_cols=57 Identities=12% Similarity=0.222 Sum_probs=45.9
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEeccccceEEEeeCchHHHHHHHhh-cccEEEEEcCCcHHHHHHHHHHHCCC
Q 011855 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPD 382 (476)
Q Consensus 304 ~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~~ILd~LDP~ 382 (476)
+.+++||||||+.... .+.|...+-|+++. +...++|-|.-....+.++++.+...
T Consensus 4 kli~~DlDGTLl~~~~-----------------------~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 60 (230)
T PRK01158 4 KAIAIDIDGTITDKDR-----------------------RLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTS 60 (230)
T ss_pred eEEEEecCCCcCCCCC-----------------------ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCC
Confidence 5889999999996421 24577788888888 56899999999999999999988765
Q ss_pred C
Q 011855 383 G 383 (476)
Q Consensus 383 ~ 383 (476)
+
T Consensus 61 ~ 61 (230)
T PRK01158 61 G 61 (230)
T ss_pred C
Confidence 4
No 107
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=93.94 E-value=0.16 Score=48.39 Aligned_cols=54 Identities=22% Similarity=0.234 Sum_probs=43.2
Q ss_pred EEEecCcccccccccccCCCCceEEEEeccccceEEEeeCchHHHHHHHhh-cccEEEEEcCCcHHHHHHHHHHHCCC
Q 011855 306 LVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPD 382 (476)
Q Consensus 306 LVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~~ILd~LDP~ 382 (476)
+++||||||+++... ..|-..+.|+++. +...++|.|......+.++++.+...
T Consensus 2 i~~DlDGTLL~~~~~-----------------------~~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 2 VFSDLDGTLLDSHSY-----------------------DWQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred EEEeCCCCCcCCCCC-----------------------CcHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 789999999975310 1233778999988 56899999999999999999998754
No 108
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=93.93 E-value=0.017 Score=57.09 Aligned_cols=99 Identities=16% Similarity=0.121 Sum_probs=73.8
Q ss_pred EEeeCchHHHHHHHhh-cccEEEEEcCCcHHHHHHHHHHHC-CCCCeeeeEEEcccceee-----CCceeecccccCCCC
Q 011855 341 YVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILD-PDGKLISRRVYRESCIFS-----DGTYTKDLTVLGVDL 413 (476)
Q Consensus 341 ~V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~~ILd~LD-P~~~lF~~RLyRe~C~~~-----~g~yiKDLs~LGrdl 413 (476)
.++.-||+..++..|. ..-.+.++|.+.+..++..++.+. +-. .|++...-+.-... +..|.+-+++||..+
T Consensus 90 ~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~-~f~~~v~~d~~~v~~gKP~Pdi~l~A~~~l~~~~ 168 (222)
T KOG2914|consen 90 NSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFK-NFSHVVLGDDPEVKNGKPDPDIYLKAAKRLGVPP 168 (222)
T ss_pred ccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHH-hcCCCeecCCccccCCCCCchHHHHHHHhcCCCC
Confidence 3788999999999998 568999999999999998888875 433 56666663322222 345788889999988
Q ss_pred -CcEEEEECCchhhccCCCceeeecccc
Q 011855 414 -AKVAIIDNSPQVFRLQVNNGIPIESWF 440 (476)
Q Consensus 414 -skVVIIDDsp~s~~~q~~NgIpI~~f~ 440 (476)
+++++++|++........-|.++...-
T Consensus 169 ~~k~lVfeds~~Gv~aa~aagm~vi~v~ 196 (222)
T KOG2914|consen 169 PSKCLVFEDSPVGVQAAKAAGMQVVGVA 196 (222)
T ss_pred ccceEEECCCHHHHHHHHhcCCeEEEec
Confidence 999999999987755554554444443
No 109
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=93.83 E-value=0.14 Score=50.03 Aligned_cols=55 Identities=25% Similarity=0.320 Sum_probs=43.7
Q ss_pred EEEEecCcccccccccccCCCCceEEEEeccccceEEEeeCchHHHHHHHhh-cccEEEEEcCCcHHHHHHHHHHHCCC
Q 011855 305 TLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPD 382 (476)
Q Consensus 305 tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~~ILd~LDP~ 382 (476)
.+++||||||++... .+.|...+.|+++. +.+.++|-|......+..+++.+...
T Consensus 1 li~~DlDGTLl~~~~-----------------------~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~ 56 (256)
T TIGR00099 1 LIFIDLDGTLLNDDH-----------------------TISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLD 56 (256)
T ss_pred CEEEeCCCCCCCCCC-----------------------ccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 378999999997521 13567788888888 56999999999999888888888765
No 110
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=93.74 E-value=0.13 Score=52.35 Aligned_cols=105 Identities=19% Similarity=0.323 Sum_probs=68.2
Q ss_pred EEeeCchHHHHHHHhh-cccEEEEEcCCcHHHHHHHHHHHCC---CCCeeeeEEEc-ccceee--CC----ceeec----
Q 011855 341 YVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDP---DGKLISRRVYR-ESCIFS--DG----TYTKD---- 405 (476)
Q Consensus 341 ~V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~~ILd~LDP---~~~lF~~RLyR-e~C~~~--~g----~yiKD---- 405 (476)
-+.+|||+.+||++|. ....++|+|+|...+++.+++.+.- ....++.++-- ++-... .+ .+.|.
T Consensus 119 ~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~~~K~~~v~ 198 (277)
T TIGR01544 119 DVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHTFNKNHDVA 198 (277)
T ss_pred CCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCCCCcccccccHHHHH
Confidence 3788999999999997 5699999999999999999998653 33455555543 221111 11 12221
Q ss_pred ---ccccC--CCCCcEEEEECCchhhcc-----CCCceeeeccccCCCCch
Q 011855 406 ---LTVLG--VDLAKVAIIDNSPQVFRL-----QVNNGIPIESWFDDPSDC 446 (476)
Q Consensus 406 ---Ls~LG--rdlskVVIIDDsp~s~~~-----q~~NgIpI~~f~gd~~D~ 446 (476)
.+.++ .+++++|+|-|+..-..+ +.+|.|.| .|..+.-+.
T Consensus 199 ~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~i-gfln~~~e~ 248 (277)
T TIGR01544 199 LRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKI-GYLNDRVDE 248 (277)
T ss_pred HHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEE-EecccCHHH
Confidence 12345 678899999999964422 33455555 444444344
No 111
>PRK10976 putative hydrolase; Provisional
Probab=93.72 E-value=0.18 Score=49.42 Aligned_cols=57 Identities=23% Similarity=0.246 Sum_probs=42.0
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEeccccceEEEeeCchHHHHHHHhh-cccEEEEEcCCcHHHHHHHHHHHCCC
Q 011855 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPD 382 (476)
Q Consensus 304 ~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~~ILd~LDP~ 382 (476)
+.+++||||||++... .+.|...+-|+++. +...++|-|.-....+.++++.|+..
T Consensus 3 kli~~DlDGTLl~~~~-----------------------~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 59 (266)
T PRK10976 3 QVVASDLDGTLLSPDH-----------------------TLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIK 59 (266)
T ss_pred eEEEEeCCCCCcCCCC-----------------------cCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCC
Confidence 5899999999997531 12455667777776 56888888888888888888877655
Q ss_pred C
Q 011855 383 G 383 (476)
Q Consensus 383 ~ 383 (476)
.
T Consensus 60 ~ 60 (266)
T PRK10976 60 S 60 (266)
T ss_pred C
Confidence 3
No 112
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=93.68 E-value=0.18 Score=49.69 Aligned_cols=57 Identities=18% Similarity=0.201 Sum_probs=43.3
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEeccccceEEEeeCchHHHHHHHhh-cccEEEEEcCCcHHHHHHHHHHHCCC
Q 011855 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPD 382 (476)
Q Consensus 304 ~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~~ILd~LDP~ 382 (476)
+++++||||||+.... .+.|...+-|+++. +...++|-|.-....+.++++.++..
T Consensus 3 kli~~DlDGTLl~~~~-----------------------~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 59 (272)
T PRK15126 3 RLAAFDMDGTLLMPDH-----------------------HLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLD 59 (272)
T ss_pred cEEEEeCCCcCcCCCC-----------------------cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCC
Confidence 5899999999996421 13556677788877 56888888888888888888887765
Q ss_pred C
Q 011855 383 G 383 (476)
Q Consensus 383 ~ 383 (476)
.
T Consensus 60 ~ 60 (272)
T PRK15126 60 A 60 (272)
T ss_pred C
Confidence 4
No 113
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=93.24 E-value=0.094 Score=49.97 Aligned_cols=117 Identities=20% Similarity=0.267 Sum_probs=81.4
Q ss_pred CCccCCCCceEEEEecCcccccccccccCCCCceEEEEeccccceEEEeeCchHHHHHHHhh-cccEEEEEcCCcHHHHH
Q 011855 295 PKETQGRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAA 373 (476)
Q Consensus 295 P~~~~~~kk~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~ 373 (476)
|.....++-+.+|+|||+|||-= ... ..-|-+++.+..+. +.-.++|.+...+.-+.
T Consensus 20 ~~~L~~~Gikgvi~DlDNTLv~w--d~~--------------------~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~ 77 (175)
T COG2179 20 PDILKAHGIKGVILDLDNTLVPW--DNP--------------------DATPELRAWLAELKEAGIKVVVVSNNKESRVA 77 (175)
T ss_pred HHHHHHcCCcEEEEeccCceecc--cCC--------------------CCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHH
Confidence 33445677889999999999842 211 12588899999998 55999999999999999
Q ss_pred HHHHHHCCCCCeeeeEEEcccceeeCCceeecccccCCCCCcEEEEECCch--hhccCCC--ceeeecccc
Q 011855 374 QLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNSPQ--VFRLQVN--NGIPIESWF 440 (476)
Q Consensus 374 ~ILd~LDP~~~lF~~RLyRe~C~~~~g~yiKDLs~LGrdlskVVIIDDsp~--s~~~q~~--NgIpI~~f~ 440 (476)
.++..||-.. + ++-- ......+.|-|..++-++++|++|-|.-. +...+.. -.|.|+|-.
T Consensus 78 ~~~~~l~v~f--i----~~A~-KP~~~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~~tIlV~Pl~ 141 (175)
T COG2179 78 RAAEKLGVPF--I----YRAK-KPFGRAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGMRTILVEPLV 141 (175)
T ss_pred hhhhhcCCce--e----eccc-CccHHHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCcEEEEEEEec
Confidence 9999988752 1 1100 00112346777888999999999999883 4443331 246666665
No 114
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=93.07 E-value=0.021 Score=53.90 Aligned_cols=79 Identities=24% Similarity=0.359 Sum_probs=42.8
Q ss_pred EeeCchHHHHHHHhhcc-cEEEEEcCCcHH-------HHHHHHHHHCCCCCeeeeEEEcccceeeCCceeecccccCCCC
Q 011855 342 VKQRPHLKTFLERVAEM-FEVVIFTASQSI-------YAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDL 413 (476)
Q Consensus 342 V~lRPgl~eFLe~Lsk~-YEIVIfTAs~~~-------YA~~ILd~LDP~~~lF~~RLyRe~C~~~~g~yiKDLs~LGrdl 413 (476)
...-||+.+.|++|.+. +++++-|+.... -....|+..-|. ......++..+ |. .++.|
T Consensus 72 l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~-i~~~~~~~~~~---------K~--~v~~D- 138 (191)
T PF06941_consen 72 LPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPF-IPYDNLIFTGD---------KT--LVGGD- 138 (191)
T ss_dssp --B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTH-HHHCCEEEESS---------GG--GC--S-
T ss_pred CCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCC-CchheEEEecC---------CC--eEecc-
Confidence 56679999999999966 588877777644 112333333221 11222333211 22 34433
Q ss_pred CcEEEEECCchhhccCCCceeee
Q 011855 414 AKVAIIDNSPQVFRLQVNNGIPI 436 (476)
Q Consensus 414 skVVIIDDsp~s~~~q~~NgIpI 436 (476)
|+|||+|.........|+++
T Consensus 139 ---vlIDD~~~n~~~~~~~g~~~ 158 (191)
T PF06941_consen 139 ---VLIDDRPHNLEQFANAGIPV 158 (191)
T ss_dssp ---EEEESSSHHHSS-SSESSEE
T ss_pred ---EEecCChHHHHhccCCCceE
Confidence 89999999887666677444
No 115
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=92.95 E-value=0.13 Score=56.15 Aligned_cols=128 Identities=18% Similarity=0.233 Sum_probs=72.7
Q ss_pred CCCceEEEEecCcccccccccccCCCCceEEEEeccc-cceEEEeeCchHHHHHHHhh-cccEEEEEcCCcHHHHHHHHH
Q 011855 300 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMK-EHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLD 377 (476)
Q Consensus 300 ~~kk~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~-~~~~~V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~~ILd 377 (476)
.+.++.||||||+||.-.. -..+-.-.+..... ....| =-+.+|...+. +.+=+.|.|.....-|..+..
T Consensus 219 g~~kK~LVLDLDNTLWGGV----IGedGv~GI~Ls~~~~G~~f----k~fQ~~Ik~l~kqGVlLav~SKN~~~da~evF~ 290 (574)
T COG3882 219 GKSKKALVLDLDNTLWGGV----IGEDGVDGIRLSNSAEGEAF----KTFQNFIKGLKKQGVLLAVCSKNTEKDAKEVFR 290 (574)
T ss_pred CcccceEEEecCCcccccc----cccccccceeecCCCCchhH----HHHHHHHHHHHhccEEEEEecCCchhhHHHHHh
Confidence 5567899999999995433 21111111111100 00000 01455566665 678889999999988888776
Q ss_pred HHCCCCCeeeeEEEccc-----ceeeC--CceeecccccCCCCCcEEEEECCchhhccCCCce-eeeccccC
Q 011855 378 ILDPDGKLISRRVYRES-----CIFSD--GTYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNG-IPIESWFD 441 (476)
Q Consensus 378 ~LDP~~~lF~~RLyRe~-----C~~~~--g~yiKDLs~LGrdlskVVIIDDsp~s~~~q~~Ng-IpI~~f~g 441 (476)
+- |+ ..|--++ |.+.+ .+..|-..+|+-.+.-.|+|||+|.....-..++ |.|..|-.
T Consensus 291 kh-p~-----MiLkeedfa~~~iNW~~K~eNirkIAkklNlg~dSmvFiDD~p~ErE~vk~~~~v~Vi~~~~ 356 (574)
T COG3882 291 KH-PD-----MILKEEDFAVFQINWDPKAENIRKIAKKLNLGLDSMVFIDDNPAERELVKRELPVSVIEFPE 356 (574)
T ss_pred hC-CC-----eEeeHhhhhhheecCCcchhhHHHHHHHhCCCccceEEecCCHHHHHHHHhcCceeeccCCC
Confidence 53 21 1222222 22222 2445667788999999999999997664433222 55555543
No 116
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=92.91 E-value=0.26 Score=48.32 Aligned_cols=55 Identities=25% Similarity=0.198 Sum_probs=43.7
Q ss_pred EEEEecCcccccccccccCCCCceEEEEeccccceEEEeeCchHHHHHHHhhc-ccEEEEEcCCcHHHHHHHHHHHCCC
Q 011855 305 TLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPD 382 (476)
Q Consensus 305 tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Lsk-~YEIVIfTAs~~~YA~~ILd~LDP~ 382 (476)
.+++||||||++.... ..+...++|+++.+ ...+++.|.-....+.++++.++..
T Consensus 1 li~~DlDGTll~~~~~-----------------------~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~ 56 (256)
T TIGR01486 1 WIFTDLDGTLLDPHGY-----------------------DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLE 56 (256)
T ss_pred CEEEcCCCCCcCCCCc-----------------------CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 3789999999976310 13457899999985 5999999999999999999998753
No 117
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=92.56 E-value=0.29 Score=45.37 Aligned_cols=63 Identities=14% Similarity=0.221 Sum_probs=42.6
Q ss_pred EEEEecCcccccccccccCCCCceEEEEeccccceEEEeeCchHHHHHHHhh-cccEEEEEcCCcHHHHH---HHHHHH
Q 011855 305 TLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAA---QLLDIL 379 (476)
Q Consensus 305 tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~---~ILd~L 379 (476)
.+++|+||||+.+.... ...+. .... +..|++.++++++. +.|.+++.|+.....+. +.++.+
T Consensus 1 iVisDIDGTL~~sd~~~-----~~~~~----~~~~---~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~ 67 (157)
T smart00775 1 IVISDIDGTITKSDVLG-----HVVPI----IGKD---WTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQI 67 (157)
T ss_pred CEEEecCCCCccccccc-----ccccc----cccC---cCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHh
Confidence 37899999999764110 00000 0111 34799999999998 57999999998877774 566664
No 118
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=92.54 E-value=0.24 Score=46.42 Aligned_cols=54 Identities=31% Similarity=0.375 Sum_probs=43.3
Q ss_pred EEEEecCcccccccccccCCCCceEEEEeccccceEEEeeCchHHHHHHHhhcc-cEEEEEcCCcHHHHHHHHHHHC
Q 011855 305 TLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEM-FEVVIFTASQSIYAAQLLDILD 380 (476)
Q Consensus 305 tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Lsk~-YEIVIfTAs~~~YA~~ILd~LD 380 (476)
+|++|+||||+.... ....|.+.+.|+++.+. ..++|.|......+..+++.+.
T Consensus 1 li~~D~DgTL~~~~~----------------------~~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 1 LLFFDLDGTLLDPNA----------------------HELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred CEEEeCcCCCcCCCC----------------------CcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 378999999996420 12358889999999854 8999999999999999998753
No 119
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=92.49 E-value=0.31 Score=46.27 Aligned_cols=96 Identities=20% Similarity=0.281 Sum_probs=63.6
Q ss_pred CCCCceEEEEecCcccccccccccCCCCceEEEEeccccceEEEeeCchHHHHHHHhhccc---EEEEEcCCc-------
Q 011855 299 QGRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMF---EVVIFTASQ------- 368 (476)
Q Consensus 299 ~~~kk~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Lsk~Y---EIVIfTAs~------- 368 (476)
...+-+.||||+|+||+.-.. -..-|.+.+.++++.+.| .|+|.|.+.
T Consensus 37 k~~Gik~li~DkDNTL~~~~~----------------------~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~ 94 (168)
T PF09419_consen 37 KKKGIKALIFDKDNTLTPPYE----------------------DEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPD 94 (168)
T ss_pred hhcCceEEEEcCCCCCCCCCc----------------------CcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCcc
Confidence 356677999999999974321 124678889999999765 399999983
Q ss_pred HHHHHHHHHHHCCCCCeeeeEEEcccceeeCCceeecccccC-----CCCCcEEEEECCch
Q 011855 369 SIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLG-----VDLAKVAIIDNSPQ 424 (476)
Q Consensus 369 ~~YA~~ILd~LDP~~~lF~~RLyRe~C~~~~g~yiKDLs~LG-----rdlskVVIIDDsp~ 424 (476)
..-|+.+-+.|... .|.|+-- .++.+.+-++.++ ..++++++|-|+..
T Consensus 95 ~~~a~~~~~~lgIp--vl~h~~k------KP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~ 147 (168)
T PF09419_consen 95 GERAEALEKALGIP--VLRHRAK------KPGCFREILKYFKCQKVVTSPSEIAVIGDRLF 147 (168)
T ss_pred HHHHHHHHHhhCCc--EEEeCCC------CCccHHHHHHHHhhccCCCCchhEEEEcchHH
Confidence 67788888888743 2333211 2233223333332 35889999999873
No 120
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=92.43 E-value=0.34 Score=45.87 Aligned_cols=53 Identities=17% Similarity=0.236 Sum_probs=41.2
Q ss_pred EEEecCcccccccccccCCCCceEEEEeccccceEEEeeCchHHHHHHHhh-cccEEEEEcCCcHHHHHHHHHHHCC
Q 011855 306 LVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDP 381 (476)
Q Consensus 306 LVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~~ILd~LDP 381 (476)
+++||||||+++.. .+.|-..+-|+++. +...+++-|.-....+.++++.|..
T Consensus 1 i~~DlDGTLl~~~~-----------------------~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~ 54 (225)
T TIGR01482 1 IASDIDGTLTDPNR-----------------------AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGT 54 (225)
T ss_pred CeEeccCccCCCCc-----------------------ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCC
Confidence 58999999997531 13456677788877 5689999999988888888888874
No 121
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=92.19 E-value=0.4 Score=43.49 Aligned_cols=49 Identities=16% Similarity=0.331 Sum_probs=41.6
Q ss_pred EeeCchHHHHHHHhh-cccEEEEEcCCcHHHHHHHHHHHCCCCCeeeeEEE
Q 011855 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVY 391 (476)
Q Consensus 342 V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~~ILd~LDP~~~lF~~RLy 391 (476)
+.++||+.++|+++. +.+.++|.|++.+.|++++++.+.... +|..++.
T Consensus 72 ~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~-~~~~~~~ 121 (177)
T TIGR01488 72 VALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDD-VFANRLE 121 (177)
T ss_pred CCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCch-heeeeEE
Confidence 568999999999997 569999999999999999999987653 5655554
No 122
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=92.07 E-value=0.32 Score=48.67 Aligned_cols=59 Identities=15% Similarity=0.075 Sum_probs=42.7
Q ss_pred ceEEEEecCcccccccccccCCCCceEEEEeccccceEEEeeCchHHHHHHHhhc--ccEEEEEcCCcHHHHHHHHHHH
Q 011855 303 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE--MFEVVIFTASQSIYAAQLLDIL 379 (476)
Q Consensus 303 k~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Lsk--~YEIVIfTAs~~~YA~~ILd~L 379 (476)
+..|++|+||||+.....+.. ...-|.+.+-|+.|++ ...++|.|.-...-+..+++.+
T Consensus 14 ~~li~~D~DGTLl~~~~~p~~------------------~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~ 74 (266)
T PRK10187 14 NYAWFFDLDGTLAEIKPHPDQ------------------VVVPDNILQGLQLLATANDGALALISGRSMVELDALAKPY 74 (266)
T ss_pred CEEEEEecCCCCCCCCCCccc------------------ccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcc
Confidence 679999999999975422211 1234788888888875 5788888888888777776544
No 123
>PTZ00174 phosphomannomutase; Provisional
Probab=91.75 E-value=0.44 Score=46.84 Aligned_cols=52 Identities=19% Similarity=0.253 Sum_probs=38.1
Q ss_pred ceEEEEecCcccccccccccCCCCceEEEEeccccceEEEeeCchHHHHHHHhh-cccEEEEEcCCcHHHHHHHHH
Q 011855 303 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLD 377 (476)
Q Consensus 303 k~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~~ILd 377 (476)
.+.+++||||||+++.. .+.|...+-|+++. +...++|-|.....-+.+.++
T Consensus 5 ~klia~DlDGTLL~~~~-----------------------~is~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~l~ 57 (247)
T PTZ00174 5 KTILLFDVDGTLTKPRN-----------------------PITQEMKDTLAKLKSKGFKIGVVGGSDYPKIKEQLG 57 (247)
T ss_pred CeEEEEECcCCCcCCCC-----------------------CCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHh
Confidence 46899999999997631 13566778888887 568899999877665544444
No 124
>PRK10444 UMP phosphatase; Provisional
Probab=91.73 E-value=0.25 Score=49.07 Aligned_cols=54 Identities=22% Similarity=0.360 Sum_probs=42.7
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEeccccceEEEeeCchHHHHHHHhh-cccEEEEEcCCcHHHHHHHHHHHCC
Q 011855 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDP 381 (476)
Q Consensus 304 ~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~~ILd~LDP 381 (476)
+.+++||||||++.. ..-|++.+||+++. +...+++.|.....-...+++.|.-
T Consensus 2 ~~v~~DlDGtL~~~~------------------------~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~ 56 (248)
T PRK10444 2 KNVICDIDGVLMHDN------------------------VAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFAT 56 (248)
T ss_pred cEEEEeCCCceEeCC------------------------eeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHH
Confidence 378999999998762 12589999999998 5799999999988767777766643
No 125
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=91.73 E-value=0.1 Score=50.90 Aligned_cols=89 Identities=10% Similarity=0.113 Sum_probs=62.2
Q ss_pred EeeCchHHHHHHHhhcccEEEEEcCCcHHHHHHHHHHHCCCCCeeeeEEEcccceee---CCceeecccccCCCCCcEEE
Q 011855 342 VKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFS---DGTYTKDLTVLGVDLAKVAI 418 (476)
Q Consensus 342 V~lRPgl~eFLe~Lsk~YEIVIfTAs~~~YA~~ILd~LDP~~~lF~~RLyRe~C~~~---~g~yiKDLs~LGrdlskVVI 418 (476)
+..-||+.++|++|++.|.++|.|++... ++.++.. .+|+..+..+..... ...|.+-++.+|.+++++|+
T Consensus 112 ~~~~~gv~~~L~~L~~~~~l~i~Tn~~~~-----~~~~gl~-~~fd~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~ 185 (238)
T PRK10748 112 IDVPQATHDTLKQLAKKWPLVAITNGNAQ-----PELFGLG-DYFEFVLRAGPHGRSKPFSDMYHLAAEKLNVPIGEILH 185 (238)
T ss_pred CCCCccHHHHHHHHHcCCCEEEEECCCch-----HHHCCcH-HhhceeEecccCCcCCCcHHHHHHHHHHcCCChhHEEE
Confidence 44559999999999988999999998875 2444443 478877765543322 22456667788999999999
Q ss_pred EECCc-hhhccCCCceeee
Q 011855 419 IDNSP-QVFRLQVNNGIPI 436 (476)
Q Consensus 419 IDDsp-~s~~~q~~NgIpI 436 (476)
|-|++ .-......+|+..
T Consensus 186 VGD~~~~Di~~A~~aG~~~ 204 (238)
T PRK10748 186 VGDDLTTDVAGAIRCGMQA 204 (238)
T ss_pred EcCCcHHHHHHHHHCCCeE
Confidence 98884 4443344455554
No 126
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=91.52 E-value=0.27 Score=48.93 Aligned_cols=49 Identities=18% Similarity=0.326 Sum_probs=41.1
Q ss_pred EeeCchHHHHHHHhh---cccEEEEEcCCcHHHHHHHHHHHCCCCCeeeeEEE
Q 011855 342 VKQRPHLKTFLERVA---EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVY 391 (476)
Q Consensus 342 V~lRPgl~eFLe~Ls---k~YEIVIfTAs~~~YA~~ILd~LDP~~~lF~~RLy 391 (476)
+...||..+|+++++ ..++++|-|-+..-|-+.||+.-+... +|+.++.
T Consensus 70 ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~-~f~~I~T 121 (234)
T PF06888_consen 70 IPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRD-CFSEIFT 121 (234)
T ss_pred CCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCcc-ccceEEe
Confidence 788999999999995 379999999999999999999987764 4544333
No 127
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=91.24 E-value=0.34 Score=49.72 Aligned_cols=53 Identities=17% Similarity=0.265 Sum_probs=41.2
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEeccccceEEEeeCchHHHHHHHhhc-----ccEEEEEcCCc----HHHHHH
Q 011855 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-----MFEVVIFTASQ----SIYAAQ 374 (476)
Q Consensus 304 ~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Lsk-----~YEIVIfTAs~----~~YA~~ 374 (476)
+.++||+||||+++. ..-|++.+||+.+.. ...++++|... +.+++.
T Consensus 1 ~~~ifD~DGvL~~g~------------------------~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~ 56 (321)
T TIGR01456 1 FGFAFDIDGVLFRGK------------------------KPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEE 56 (321)
T ss_pred CEEEEeCcCceECCc------------------------cccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHH
Confidence 368999999998763 126899999999996 78899999775 567777
Q ss_pred HHHHHC
Q 011855 375 LLDILD 380 (476)
Q Consensus 375 ILd~LD 380 (476)
+.+.+.
T Consensus 57 l~~~lG 62 (321)
T TIGR01456 57 ISSLLG 62 (321)
T ss_pred HHHHcC
Confidence 756654
No 128
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=91.09 E-value=0.21 Score=49.96 Aligned_cols=101 Identities=17% Similarity=0.190 Sum_probs=67.5
Q ss_pred EEeeCchHHHHHHHhh-cccEEEEEcCCcHHHHHHHHHHHCCCCCeeeeEEEccc---------------ceeeCCc-e-
Q 011855 341 YVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRES---------------CIFSDGT-Y- 402 (476)
Q Consensus 341 ~V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~~ILd~LDP~~~lF~~RLyRe~---------------C~~~~g~-y- 402 (476)
+...-|.+-++++.++ +..-++..|+....+...-++.|---|--|+...+++. -.+.+|. +
T Consensus 79 ~~lie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlft 158 (252)
T PF11019_consen 79 MELIESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGIDFSSSSFPEDGIISFPVFDSALSRAPSFYDGILFT 158 (252)
T ss_pred eEEcchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCCccccccccCcceecccccCCCCCCceeecCeEEe
Confidence 3566789999999999 67999999999999999888887444322333321111 1122231 1
Q ss_pred ---------eecccccCCCCCcEEEEECCchhh----ccCCCceeeeccccC
Q 011855 403 ---------TKDLTVLGVDLAKVAIIDNSPQVF----RLQVNNGIPIESWFD 441 (476)
Q Consensus 403 ---------iKDLs~LGrdlskVVIIDDsp~s~----~~q~~NgIpI~~f~g 441 (476)
..=|..+|..++++|+|||+.... ..-...+|..-.++-
T Consensus 159 ~~~~KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~~a~k~~~I~f~G~~Y 210 (252)
T PF11019_consen 159 GGQDKGEVLKYFLDKINQSPKKIIFIDDNKENLKSVEKACKKSGIDFIGFHY 210 (252)
T ss_pred CCCccHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHHHhhCCCcEEEEEE
Confidence 122456799999999999999765 222337777777653
No 129
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=91.03 E-value=0.6 Score=48.30 Aligned_cols=57 Identities=12% Similarity=0.155 Sum_probs=44.5
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEeccccceEEEeeCchHHHHHHHhh-cccEEEEEcCCcHHHHHHHHHHHCCC
Q 011855 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPD 382 (476)
Q Consensus 304 ~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~~ILd~LDP~ 382 (476)
+.+++||||||++... | .-+-+.+-|+++. +...+++.|+-+..-...+.+.|...
T Consensus 2 KLIftDLDGTLLd~~~---------------------~--~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~ 58 (302)
T PRK12702 2 RLVLSSLDGSLLDLEF---------------------N--SYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLE 58 (302)
T ss_pred cEEEEeCCCCCcCCCC---------------------c--CCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCC
Confidence 5789999999997531 1 1244677888888 56999999999998888899998765
Q ss_pred C
Q 011855 383 G 383 (476)
Q Consensus 383 ~ 383 (476)
.
T Consensus 59 ~ 59 (302)
T PRK12702 59 H 59 (302)
T ss_pred C
Confidence 4
No 130
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=90.70 E-value=0.29 Score=48.61 Aligned_cols=47 Identities=17% Similarity=0.154 Sum_probs=34.8
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEeccccceEEEeeCchHHHHHHHhh-cccEEEEEcCCcHH
Q 011855 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSI 370 (476)
Q Consensus 304 ~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~ 370 (476)
++++|||||||++..... =..-|++.++|+++. +...+++.|.....
T Consensus 2 k~i~~D~DGtl~~~~~~~--------------------~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~ 49 (257)
T TIGR01458 2 KGVLLDISGVLYISDAKS--------------------GVAVPGSQEAVKRLRGASVKVRFVTNTTKE 49 (257)
T ss_pred CEEEEeCCCeEEeCCCcc--------------------cCcCCCHHHHHHHHHHCCCeEEEEECCCCC
Confidence 378999999998753100 003589999999999 56999999975554
No 131
>PLN02645 phosphoglycolate phosphatase
Probab=90.13 E-value=0.39 Score=49.04 Aligned_cols=53 Identities=15% Similarity=0.078 Sum_probs=39.7
Q ss_pred ceEEEEecCcccccccccccCCCCceEEEEeccccceEEEeeCchHHHHHHHhh-cccEEEEEcCCcHHHHHHHHHHH
Q 011855 303 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDIL 379 (476)
Q Consensus 303 k~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~~ILd~L 379 (476)
-..++||+||||++.. . .=||+.++|+++. +...+++.|+....-...+++.|
T Consensus 28 ~~~~~~D~DGtl~~~~----------------------~--~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l 81 (311)
T PLN02645 28 VETFIFDCDGVIWKGD----------------------K--LIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKF 81 (311)
T ss_pred CCEEEEeCcCCeEeCC----------------------c--cCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHH
Confidence 3589999999997642 0 1289999999998 67999999998855555555443
No 132
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=90.03 E-value=0.4 Score=44.72 Aligned_cols=85 Identities=25% Similarity=0.277 Sum_probs=57.6
Q ss_pred EeeCchHHHHHHHhh-cccEEEEEcCCcHHHHHHHHHHHCCCCCeeeeEEEc-ccceee---CC--ce--eec--c----
Q 011855 342 VKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYR-ESCIFS---DG--TY--TKD--L---- 406 (476)
Q Consensus 342 V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~~ILd~LDP~~~lF~~RLyR-e~C~~~---~g--~y--iKD--L---- 406 (476)
..++|++.++|+++. +.+.++|-|++...+++++++.++-.. +|..++.. ++-.+. .+ .+ .|- +
T Consensus 86 ~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~-~~~~~l~~~~~g~~~g~~~~~~~~g~~K~~~l~~~~ 164 (202)
T TIGR01490 86 SILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDN-AIGTRLEESEDGIYTGNIDGNNCKGEGKVHALAELL 164 (202)
T ss_pred HhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcc-eEecceEEcCCCEEeCCccCCCCCChHHHHHHHHHH
Confidence 357999999999997 569999999999999999999988765 66664432 210111 00 00 011 2
Q ss_pred cccCCCCCcEEEEECCchhhc
Q 011855 407 TVLGVDLAKVAIIDNSPQVFR 427 (476)
Q Consensus 407 s~LGrdlskVVIIDDsp~s~~ 427 (476)
...+.++++++.+-|++.-..
T Consensus 165 ~~~~~~~~~~~~~gDs~~D~~ 185 (202)
T TIGR01490 165 AEEQIDLKDSYAYGDSISDLP 185 (202)
T ss_pred HHcCCCHHHcEeeeCCcccHH
Confidence 234667778888888875443
No 133
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=89.97 E-value=0.47 Score=47.46 Aligned_cols=41 Identities=20% Similarity=0.262 Sum_probs=32.6
Q ss_pred eEEEEecCcccccccccccCCCCceEEEEeccccceEEEeeCchHHHHHHHhh-cccEEEEEcCCc
Q 011855 304 VTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQ 368 (476)
Q Consensus 304 ~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Ls-k~YEIVIfTAs~ 368 (476)
..+++|+||||++.. ..-||+.++|+++. +...+++.|++.
T Consensus 3 ~~~~~D~DGtl~~~~------------------------~~~~ga~e~l~~L~~~g~~~~~~Tnns 44 (279)
T TIGR01452 3 QGFIFDCDGVLWLGE------------------------RVVPGAPELLDRLARAGKAALFVTNNS 44 (279)
T ss_pred cEEEEeCCCceEcCC------------------------eeCcCHHHHHHHHHHCCCeEEEEeCCC
Confidence 478999999997642 12588999999998 568999999854
No 134
>PLN02423 phosphomannomutase
Probab=89.64 E-value=0.74 Score=45.47 Aligned_cols=55 Identities=18% Similarity=0.354 Sum_probs=37.1
Q ss_pred CCceEEEEecCcccccccccccCCCCceEEEEeccccceEEEeeCchHHHHHHHhhcccEEEEEcCCcHHHHHHHHHHHC
Q 011855 301 RKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILD 380 (476)
Q Consensus 301 ~kk~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Lsk~YEIVIfTAs~~~YA~~ILd~LD 380 (476)
+.+..+++||||||+.... .+.|...+-|+++.+...+++.|...- ..+.+.+.
T Consensus 5 ~~~~i~~~D~DGTLl~~~~-----------------------~i~~~~~~ai~~l~~~i~fviaTGR~~---~~~~~~~~ 58 (245)
T PLN02423 5 KPGVIALFDVDGTLTAPRK-----------------------EATPEMLEFMKELRKVVTVGVVGGSDL---SKISEQLG 58 (245)
T ss_pred ccceEEEEeccCCCcCCCC-----------------------cCCHHHHHHHHHHHhCCEEEEECCcCH---HHHHHHhc
Confidence 3455666999999996531 135677888999987777778777532 24555554
Q ss_pred C
Q 011855 381 P 381 (476)
Q Consensus 381 P 381 (476)
+
T Consensus 59 ~ 59 (245)
T PLN02423 59 K 59 (245)
T ss_pred c
Confidence 4
No 135
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=89.08 E-value=1.3 Score=50.52 Aligned_cols=61 Identities=18% Similarity=0.131 Sum_probs=46.6
Q ss_pred CCCCceEEEEecCcccccccccccCCCCceEEEEeccccceEEEeeCchHHHHHHHhh-cccEEEEEcCCcHHHHHHHHH
Q 011855 299 QGRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLD 377 (476)
Q Consensus 299 ~~~kk~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~~ILd 377 (476)
...+++.+++||||||++... ++. +...+-|+++. +...+++.|.-....+..+++
T Consensus 412 ~~~~~KLIfsDLDGTLLd~d~---------------------~i~--~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~ 468 (694)
T PRK14502 412 SGQFKKIVYTDLDGTLLNPLT---------------------YSY--STALDALRLLKDKELPLVFCSAKTMGEQDLYRN 468 (694)
T ss_pred cCceeeEEEEECcCCCcCCCC---------------------ccC--HHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHH
Confidence 356778999999999997531 111 23456677777 569999999999999999999
Q ss_pred HHCCC
Q 011855 378 ILDPD 382 (476)
Q Consensus 378 ~LDP~ 382 (476)
.|+..
T Consensus 469 ~Lgl~ 473 (694)
T PRK14502 469 ELGIK 473 (694)
T ss_pred HcCCC
Confidence 98754
No 136
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=88.92 E-value=0.82 Score=44.68 Aligned_cols=60 Identities=25% Similarity=0.081 Sum_probs=41.3
Q ss_pred ceEEEEecCcccccccccccCCCCceEEEEeccccceEEEeeCchHHHHHHHhhccc-EEEEEcCCcHHHHHHHHHHHCC
Q 011855 303 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMF-EVVIFTASQSIYAAQLLDILDP 381 (476)
Q Consensus 303 k~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Lsk~Y-EIVIfTAs~~~YA~~ILd~LDP 381 (476)
++.++.||||||+.+.... -...|.+.+.++++.+.. .+|+-|.-+..-+.++++.+.+
T Consensus 1 ~~li~tDlDGTLl~~~~~~--------------------~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~ 60 (249)
T TIGR01485 1 RLLLVSDLDNTLVDHTDGD--------------------NQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPL 60 (249)
T ss_pred CeEEEEcCCCcCcCCCCCC--------------------hHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCC
Confidence 4688999999999632000 123588888888887554 7777777777777777776654
Q ss_pred C
Q 011855 382 D 382 (476)
Q Consensus 382 ~ 382 (476)
.
T Consensus 61 ~ 61 (249)
T TIGR01485 61 L 61 (249)
T ss_pred C
Confidence 4
No 137
>PLN02887 hydrolase family protein
Probab=88.45 E-value=1.1 Score=50.29 Aligned_cols=58 Identities=22% Similarity=0.209 Sum_probs=46.1
Q ss_pred CceEEEEecCcccccccccccCCCCceEEEEeccccceEEEeeCchHHHHHHHhh-cccEEEEEcCCcHHHHHHHHHHHC
Q 011855 302 KSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILD 380 (476)
Q Consensus 302 kk~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~~ILd~LD 380 (476)
+.+.+++||||||++... .+-|...+-|+++. +...++|.|.-...-+..+++.++
T Consensus 307 ~iKLIa~DLDGTLLn~d~-----------------------~Is~~t~eAI~kl~ekGi~~vIATGR~~~~i~~~l~~L~ 363 (580)
T PLN02887 307 KFSYIFCDMDGTLLNSKS-----------------------QISETNAKALKEALSRGVKVVIATGKARPAVIDILKMVD 363 (580)
T ss_pred CccEEEEeCCCCCCCCCC-----------------------ccCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhC
Confidence 456899999999997531 13566677888887 679999999999999999999887
Q ss_pred CC
Q 011855 381 PD 382 (476)
Q Consensus 381 P~ 382 (476)
..
T Consensus 364 l~ 365 (580)
T PLN02887 364 LA 365 (580)
T ss_pred cc
Confidence 54
No 138
>COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]
Probab=88.22 E-value=1.2 Score=41.87 Aligned_cols=82 Identities=20% Similarity=0.311 Sum_probs=52.5
Q ss_pred EeeCchHHHHHHHhhcccEEEEEcCCcHHH------HHHHHHH---HCCCCCeeeeEEEcccceeeCCceeecccccCCC
Q 011855 342 VKQRPHLKTFLERVAEMFEVVIFTASQSIY------AAQLLDI---LDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVD 412 (476)
Q Consensus 342 V~lRPgl~eFLe~Lsk~YEIVIfTAs~~~Y------A~~ILd~---LDP~~~lF~~RLyRe~C~~~~g~yiKDLs~LGrd 412 (476)
...-||+++-+++|-++|+|+|-||++..| .+.+.+. |+++ +.++ |. .|++-+
T Consensus 67 L~V~p~aq~v~keLt~~y~vYivtaamdhp~s~~dK~eWl~E~FPFi~~q-----n~vf---Cg------nKnivk---- 128 (180)
T COG4502 67 LGVQPFAQTVLKELTSIYNVYIVTAAMDHPKSCEDKGEWLKEKFPFISYQ-----NIVF---CG------NKNIVK---- 128 (180)
T ss_pred cCccccHHHHHHHHHhhheEEEEEeccCCchhHHHHHHHHHHHCCCCChh-----hEEE---ec------CCCeEE----
Confidence 566899999999999999999999995433 2233333 2222 2222 11 133221
Q ss_pred CCcEEEEECCchhhccCCCceeeeccccCCC
Q 011855 413 LAKVAIIDNSPQVFRLQVNNGIPIESWFDDP 443 (476)
Q Consensus 413 lskVVIIDDsp~s~~~q~~NgIpI~~f~gd~ 443 (476)
-=++|||.|........|-|.-..-+...
T Consensus 129 --aDilIDDnp~nLE~F~G~kIlFdA~HN~n 157 (180)
T COG4502 129 --ADILIDDNPLNLENFKGNKILFDAHHNKN 157 (180)
T ss_pred --eeEEecCCchhhhhccCceEEEecccccC
Confidence 23699999988877777777766655443
No 139
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=87.14 E-value=0.93 Score=44.78 Aligned_cols=53 Identities=21% Similarity=0.323 Sum_probs=36.4
Q ss_pred EEEEecCcccccccccccCCCCceEEEEeccccceEEEeeCchHHHHHHHhh-cccEEEEEcCCc---HHHHHHHHHHHC
Q 011855 305 TLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQ---SIYAAQLLDILD 380 (476)
Q Consensus 305 tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Ls-k~YEIVIfTAs~---~~YA~~ILd~LD 380 (476)
.+++|+||||++... .=|++.++|+++. +...+++.|.+. ..-..+.++.+.
T Consensus 3 ~~~~D~DGtl~~~~~------------------------~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g 58 (249)
T TIGR01457 3 GYLIDLDGTMYKGKE------------------------RIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFD 58 (249)
T ss_pred EEEEeCCCceEcCCe------------------------eCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcC
Confidence 789999999986520 1368899999998 568899998633 333334444444
Q ss_pred C
Q 011855 381 P 381 (476)
Q Consensus 381 P 381 (476)
.
T Consensus 59 ~ 59 (249)
T TIGR01457 59 I 59 (249)
T ss_pred C
Confidence 3
No 140
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=85.76 E-value=1 Score=44.88 Aligned_cols=92 Identities=13% Similarity=0.128 Sum_probs=54.4
Q ss_pred CCCceEEEEecCcccccccccccCCCCceEEEEeccccc-----eEEEeeCchHHHHHHHhh-cccEEEEEcCCcHHHHH
Q 011855 300 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEH-----TVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAA 373 (476)
Q Consensus 300 ~~kk~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~-----~~~V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~ 373 (476)
..++..+|||+|+|++....-... ..|.-. .++.... .---..-|++.+|++++. +.++|++.|.-......
T Consensus 74 ~dg~~A~V~DIDET~LsN~py~~~-~~~g~~-~~~~~~~~~wv~~~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~ 151 (229)
T TIGR01675 74 GDGMDAWIFDVDDTLLSNIPYYKK-HGYGTE-KTDPTAFWLWLGKGAAPALPEGLKLYQKIIELGIKIFLLSGRWEELRN 151 (229)
T ss_pred CCCCcEEEEccccccccCHHHHHH-hccCCC-cCCHHHHHHHHHcCCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHH
Confidence 357889999999999987521110 001000 0000000 011345799999999997 67999999999887755
Q ss_pred HHHHHHCCCCCe-eeeEEEcc
Q 011855 374 QLLDILDPDGKL-ISRRVYRE 393 (476)
Q Consensus 374 ~ILd~LDP~~~l-F~~RLyRe 393 (476)
..++.|.-.|-. +.+.+.|.
T Consensus 152 ~T~~nL~~~G~~~~~~LiLR~ 172 (229)
T TIGR01675 152 ATLDNLINAGFTGWKHLILRG 172 (229)
T ss_pred HHHHHHHHcCCCCcCeeeecC
Confidence 555555444411 24455564
No 141
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=85.28 E-value=0.8 Score=46.26 Aligned_cols=79 Identities=20% Similarity=0.213 Sum_probs=41.5
Q ss_pred CCCceEEEEecCccccccccc----ccCCCCceEEEEeccccceEEEeeCchHHHHHHHhhcccEEEEEcC-CcHHH-HH
Q 011855 300 GRKSVTLVLDLDETLVHSTLE----YCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTA-SQSIY-AA 373 (476)
Q Consensus 300 ~~kk~tLVLDLDeTLVhSs~~----~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Lsk~YEIVIfTA-s~~~Y-A~ 373 (476)
..|++.+|||||||.+.-+.- -.....|+.. ..+.-...---+.=||+.|||+++-++--.|.|-+ -.++- ..
T Consensus 76 k~K~~aVvlDlDETvLdNs~Yqgy~v~nnk~f~pe-~Wd~wV~a~~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~ 154 (274)
T COG2503 76 KGKKKAVVLDLDETVLDNSAYQGYQVLNNKGFTPE-TWDKWVQAKKSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKD 154 (274)
T ss_pred cCCCceEEEecchHhhcCccccchhhhcCCCCCcc-chHHHHhhcccccCccHHHHHHHHHhcCcEEEEEeccchhcccc
Confidence 455669999999999987521 1111122100 00000000014556999999999987654444444 33333 33
Q ss_pred HHHHHH
Q 011855 374 QLLDIL 379 (476)
Q Consensus 374 ~ILd~L 379 (476)
.-++-|
T Consensus 155 ~T~~nL 160 (274)
T COG2503 155 GTIENL 160 (274)
T ss_pred hhHHHH
Confidence 334443
No 142
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=85.28 E-value=1.1 Score=45.62 Aligned_cols=53 Identities=19% Similarity=0.200 Sum_probs=39.5
Q ss_pred ceEEEEecCcccccccccccCCCCceEEEEeccccceEEEeeCchHHHHHHHhhc-ccEEEEEcCCcHHHHHHHHHHH
Q 011855 303 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDIL 379 (476)
Q Consensus 303 k~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Lsk-~YEIVIfTAs~~~YA~~ILd~L 379 (476)
...+++||||||++.. ..=||+.+||+++.+ .-.+++-|++..+-.+.+..+|
T Consensus 8 y~~~l~DlDGvl~~G~------------------------~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L 61 (269)
T COG0647 8 YDGFLFDLDGVLYRGN------------------------EAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARL 61 (269)
T ss_pred cCEEEEcCcCceEeCC------------------------ccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Confidence 4478999999998763 225999999999995 5899999988765444443333
No 143
>PLN02151 trehalose-phosphatase
Probab=85.27 E-value=1.6 Score=46.15 Aligned_cols=60 Identities=15% Similarity=0.187 Sum_probs=45.7
Q ss_pred CCCceEEEEecCcccccccccccCCCCceEEEEeccccceEEEeeCchHHHHHHHhhcccEEEEEcCCcHHHHHHHHH
Q 011855 300 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLD 377 (476)
Q Consensus 300 ~~kk~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Lsk~YEIVIfTAs~~~YA~~ILd 377 (476)
..++..|+||+||||+-....+ -.+..-|.+.+-|+.|++.+.++|-|.-...-.+.++.
T Consensus 95 ~~~~~ll~lDyDGTL~PIv~~P------------------~~A~~~~~~~~aL~~La~~~~vaIvSGR~~~~l~~~~~ 154 (354)
T PLN02151 95 EGKQIVMFLDYDGTLSPIVDDP------------------DRAFMSKKMRNTVRKLAKCFPTAIVSGRCREKVSSFVK 154 (354)
T ss_pred cCCceEEEEecCccCCCCCCCc------------------ccccCCHHHHHHHHHHhcCCCEEEEECCCHHHHHHHcC
Confidence 4567899999999998432111 12456789999999999989999999888877777664
No 144
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=84.87 E-value=1.2 Score=43.64 Aligned_cols=50 Identities=26% Similarity=0.323 Sum_probs=37.1
Q ss_pred EEEecCcccccccccccCCCCceEEEEeccccceEEEeeCchHHHHHHHhhc-ccEEEEEcCCc----HHHHHHHHHHH
Q 011855 306 LVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQ----SIYAAQLLDIL 379 (476)
Q Consensus 306 LVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Lsk-~YEIVIfTAs~----~~YA~~ILd~L 379 (476)
++||+||||+.... .=|++.++|+.+.+ .+.+++-|.+. ..+++.+.+.+
T Consensus 1 ~lfD~DGvL~~~~~------------------------~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~ 55 (236)
T TIGR01460 1 FLFDIDGVLWLGHK------------------------PIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLL 55 (236)
T ss_pred CEEeCcCccCcCCc------------------------cCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhc
Confidence 47999999987631 13689999999984 58999998544 56777776643
No 145
>PLN02580 trehalose-phosphatase
Probab=84.39 E-value=1.9 Score=46.13 Aligned_cols=61 Identities=20% Similarity=0.226 Sum_probs=47.9
Q ss_pred CCCceEEEEecCcccccccccccCCCCceEEEEeccccceEEEeeCchHHHHHHHhhcccEEEEEcCCcHHHHHHHHHH
Q 011855 300 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDI 378 (476)
Q Consensus 300 ~~kk~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Lsk~YEIVIfTAs~~~YA~~ILd~ 378 (476)
..++..|+||.||||+-....| --+..-|.+.+-|+.|++.+.++|-|.-...-.+.++..
T Consensus 116 ~~k~~~LfLDyDGTLaPIv~~P------------------d~A~~s~~~~~aL~~La~~~~VAIVSGR~~~~L~~~l~~ 176 (384)
T PLN02580 116 KGKKIALFLDYDGTLSPIVDDP------------------DRALMSDAMRSAVKNVAKYFPTAIISGRSRDKVYELVGL 176 (384)
T ss_pred hcCCeEEEEecCCccCCCCCCc------------------ccccCCHHHHHHHHHHhhCCCEEEEeCCCHHHHHHHhCC
Confidence 4567899999999997443211 124567899999999999999999999988888877753
No 146
>PLN03017 trehalose-phosphatase
Probab=84.32 E-value=1.9 Score=45.86 Aligned_cols=60 Identities=17% Similarity=0.165 Sum_probs=44.9
Q ss_pred CCCceEEEEecCcccccccccccCCCCceEEEEeccccceEEEeeCchHHHHHHHhhcccEEEEEcCCcHHHHHHHHH
Q 011855 300 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLD 377 (476)
Q Consensus 300 ~~kk~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Lsk~YEIVIfTAs~~~YA~~ILd 377 (476)
..++..|+||+||||+--...+ -....-|.+.+-|++|++.+.++|-|.-...-+..+++
T Consensus 108 ~~k~~llflD~DGTL~Piv~~p------------------~~a~i~~~~~~aL~~La~~~~vaIvSGR~~~~l~~~~~ 167 (366)
T PLN03017 108 RGKQIVMFLDYDGTLSPIVDDP------------------DKAFMSSKMRRTVKKLAKCFPTAIVTGRCIDKVYNFVK 167 (366)
T ss_pred cCCCeEEEEecCCcCcCCcCCc------------------ccccCCHHHHHHHHHHhcCCcEEEEeCCCHHHHHHhhc
Confidence 4567899999999998322111 01234688999999999999999999988888887744
No 147
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=82.28 E-value=0.75 Score=45.93 Aligned_cols=41 Identities=17% Similarity=0.450 Sum_probs=35.7
Q ss_pred EeeCchHHHHHHHhhcc--cEEEEEcCCcHHHHHHHHHHHCCC
Q 011855 342 VKQRPHLKTFLERVAEM--FEVVIFTASQSIYAAQLLDILDPD 382 (476)
Q Consensus 342 V~lRPgl~eFLe~Lsk~--YEIVIfTAs~~~YA~~ILd~LDP~ 382 (476)
+-.-||+-+.++.+++. ||++|-+-+..-+.+.+|++.+..
T Consensus 83 iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~ 125 (256)
T KOG3120|consen 83 IPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIH 125 (256)
T ss_pred CCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHH
Confidence 66789999999999853 899999999999999999987643
No 148
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=82.17 E-value=1.3 Score=43.53 Aligned_cols=48 Identities=19% Similarity=0.191 Sum_probs=32.7
Q ss_pred CceEEEEecCcccccccccccCCCCceEEEEeccccceEEEeeCchHHHHHHHhhcccE--EEEEcCC
Q 011855 302 KSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFE--VVIFTAS 367 (476)
Q Consensus 302 kk~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Lsk~YE--IVIfTAs 367 (476)
|+..|+||+||||+-....+ -.++.-|++.+.|+.|++... |+|-|.-
T Consensus 2 ~~~~l~lD~DGTL~~~~~~p------------------~~~~~~~~~~~~L~~L~~~~~~~v~ivSGR 51 (244)
T TIGR00685 2 RKRAFFFDYDGTLSEIVPDP------------------DAAVVSDRLLTILQKLAARPHNAIWIISGR 51 (244)
T ss_pred CcEEEEEecCccccCCcCCC------------------cccCCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 56789999999998532211 013446889999999997754 4455554
No 149
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=81.95 E-value=2.7 Score=42.83 Aligned_cols=61 Identities=20% Similarity=0.151 Sum_probs=46.3
Q ss_pred CCCCceEEEEecCcccccccccccCCCCceEEEEeccccceEEEeeCchHHHHHHHhhcccE--EEEEcCCcHHHHHHHH
Q 011855 299 QGRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFE--VVIFTASQSIYAAQLL 376 (476)
Q Consensus 299 ~~~kk~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Lsk~YE--IVIfTAs~~~YA~~IL 376 (476)
...++.+++||.||||++....+. -+..=+++.+-|..|+..+. ++|.|.-...-.+..+
T Consensus 14 ~~a~~~~~~lDyDGTl~~i~~~p~------------------~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~ 75 (266)
T COG1877 14 LNARKRLLFLDYDGTLTEIVPHPE------------------AAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLF 75 (266)
T ss_pred ccccceEEEEeccccccccccCcc------------------ccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhc
Confidence 345678999999999998754331 13345788899999998887 8888888877777766
Q ss_pred H
Q 011855 377 D 377 (476)
Q Consensus 377 d 377 (476)
.
T Consensus 76 ~ 76 (266)
T COG1877 76 G 76 (266)
T ss_pred C
Confidence 6
No 150
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=81.42 E-value=2.5 Score=46.86 Aligned_cols=86 Identities=14% Similarity=0.112 Sum_probs=57.4
Q ss_pred EEeeCchHHHHHHHhhc-ccEEEEEcCCcHHHHHHHHHHHCCCCCeeeeEEEcccceeeCCceeecccccCCCCCcEEEE
Q 011855 341 YVKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAII 419 (476)
Q Consensus 341 ~V~lRPgl~eFLe~Lsk-~YEIVIfTAs~~~YA~~ILd~LDP~~~lF~~RLyRe~C~~~~g~yiKDLs~LGrdlskVVII 419 (476)
.-..||++.++|++|.+ .++++|-|...+.+|+.+++.+..+ +|.. +. +.....-+..+....+++++|
T Consensus 403 ~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~--~~~~------~~--p~~K~~~v~~l~~~~~~v~~V 472 (562)
T TIGR01511 403 EDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN--VRAE------VL--PDDKAALIKELQEKGRVVAMV 472 (562)
T ss_pred cccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc--EEcc------CC--hHHHHHHHHHHHHcCCEEEEE
Confidence 35689999999999984 6999999999999999999998764 2221 11 111011122334456789999
Q ss_pred ECCchhhccCCCceeee
Q 011855 420 DNSPQVFRLQVNNGIPI 436 (476)
Q Consensus 420 DDsp~s~~~q~~NgIpI 436 (476)
-|...-...-...++.|
T Consensus 473 GDg~nD~~al~~A~vgi 489 (562)
T TIGR01511 473 GDGINDAPALAQADVGI 489 (562)
T ss_pred eCCCccHHHHhhCCEEE
Confidence 99886543322233433
No 151
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=80.96 E-value=1.5 Score=40.54 Aligned_cols=80 Identities=19% Similarity=0.188 Sum_probs=58.6
Q ss_pred EEeeCchHHHHHHHhhcc-cEEEEEcCCcHHHHHHHHHHHCCCCCeeeeEEEccc-ceeeCCceeecccccCCCCCcEEE
Q 011855 341 YVKQRPHLKTFLERVAEM-FEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRES-CIFSDGTYTKDLTVLGVDLAKVAI 418 (476)
Q Consensus 341 ~V~lRPgl~eFLe~Lsk~-YEIVIfTAs~~~YA~~ILd~LDP~~~lF~~RLyRe~-C~~~~g~yiKDLs~LGrdlskVVI 418 (476)
.-.+||++.++|+.|.+. +.++|.|......|..+.+.+.... ..++.+. +...+..+.+-++.|+.+.+.|+.
T Consensus 125 ~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~----~~v~a~~~~kP~~k~~~~~i~~l~~~~~~v~~ 200 (215)
T PF00702_consen 125 RDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD----SIVFARVIGKPEPKIFLRIIKELQVKPGEVAM 200 (215)
T ss_dssp EEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS----EEEEESHETTTHHHHHHHHHHHHTCTGGGEEE
T ss_pred cCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc----ccccccccccccchhHHHHHHHHhcCCCEEEE
Confidence 457899999999999964 9999999999999999999998743 2222211 111112334555667878889999
Q ss_pred EECCch
Q 011855 419 IDNSPQ 424 (476)
Q Consensus 419 IDDsp~ 424 (476)
|-|...
T Consensus 201 vGDg~n 206 (215)
T PF00702_consen 201 VGDGVN 206 (215)
T ss_dssp EESSGG
T ss_pred EccCHH
Confidence 999873
No 152
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=80.43 E-value=2.3 Score=44.72 Aligned_cols=53 Identities=19% Similarity=0.254 Sum_probs=44.3
Q ss_pred eEEEeeCchHHHHHHHhh-cccEEEEEcCCcHHHHHHHHHHH-C------CCCCeeeeEEE
Q 011855 339 TVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDIL-D------PDGKLISRRVY 391 (476)
Q Consensus 339 ~~~V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~~ILd~L-D------P~~~lF~~RLy 391 (476)
.-||.+-||+.++|+++. +...+.|-|++...|++.+++.+ + ....+|+.++.
T Consensus 180 ~~yv~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt 240 (343)
T TIGR02244 180 EKYVLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIV 240 (343)
T ss_pred HHHhccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCcEEEe
Confidence 347888999999999998 56999999999999999999997 5 23457765555
No 153
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=78.19 E-value=5.6 Score=39.00 Aligned_cols=41 Identities=17% Similarity=0.336 Sum_probs=37.3
Q ss_pred EeeCchHHHHHHHhhc-ccEEEEEcCCcHHHHHHHHHHHCCC
Q 011855 342 VKQRPHLKTFLERVAE-MFEVVIFTASQSIYAAQLLDILDPD 382 (476)
Q Consensus 342 V~lRPgl~eFLe~Lsk-~YEIVIfTAs~~~YA~~ILd~LDP~ 382 (476)
+++|||.++|.+++.+ -..++|-++|+..|..+++..+--+
T Consensus 72 i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgk 113 (220)
T COG4359 72 IKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGK 113 (220)
T ss_pred cccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccc
Confidence 8999999999999995 5899999999999999999987644
No 154
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=77.84 E-value=1.3 Score=40.63 Aligned_cols=16 Identities=25% Similarity=0.553 Sum_probs=14.0
Q ss_pred ceEEEEecCccccccc
Q 011855 303 SVTLVLDLDETLVHST 318 (476)
Q Consensus 303 k~tLVLDLDeTLVhSs 318 (476)
.+.++||+||||+++.
T Consensus 5 ~~~viFD~DGTLiDs~ 20 (188)
T PRK10725 5 YAGLIFDMDGTILDTE 20 (188)
T ss_pred ceEEEEcCCCcCccCH
Confidence 4579999999999985
No 155
>PRK11587 putative phosphatase; Provisional
Probab=76.63 E-value=1.4 Score=42.11 Aligned_cols=15 Identities=47% Similarity=0.596 Sum_probs=13.6
Q ss_pred eEEEEecCccccccc
Q 011855 304 VTLVLDLDETLVHST 318 (476)
Q Consensus 304 ~tLVLDLDeTLVhSs 318 (476)
+.++|||||||+++.
T Consensus 4 k~viFDlDGTL~Ds~ 18 (218)
T PRK11587 4 KGFLFDLDGTLVDSL 18 (218)
T ss_pred CEEEEcCCCCcCcCH
Confidence 579999999999985
No 156
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=75.33 E-value=0.48 Score=46.72 Aligned_cols=73 Identities=18% Similarity=0.175 Sum_probs=42.7
Q ss_pred CCceEEEEecCcccccccccc----c-----CCCCceEEEEeccccceEEEeeCchHHHHHHHhh-cccEEEEEcCCcHH
Q 011855 301 RKSVTLVLDLDETLVHSTLEY----C-----DDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSI 370 (476)
Q Consensus 301 ~kk~tLVLDLDeTLVhSs~~~----~-----~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~ 370 (476)
.++..+|||+||||+...... . ...+|.-.+ .... -..=|++.+|++++. +.++|++-|.-...
T Consensus 70 ~~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv--~~~~----~~aip~a~~l~~~~~~~G~~V~~iT~R~~~ 143 (229)
T PF03767_consen 70 DKPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWV--ASGK----APAIPGALELYNYARSRGVKVFFITGRPES 143 (229)
T ss_dssp TSEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHH--HCTG----GEEETTHHHHHHHHHHTTEEEEEEEEEETT
T ss_pred CCCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHH--hccc----CcccHHHHHHHHHHHHCCCeEEEEecCCch
Confidence 578899999999998553210 0 011110000 0000 144588999999998 56899988876655
Q ss_pred HHHHHHHHH
Q 011855 371 YAAQLLDIL 379 (476)
Q Consensus 371 YA~~ILd~L 379 (476)
.-+.-++.|
T Consensus 144 ~r~~T~~nL 152 (229)
T PF03767_consen 144 QREATEKNL 152 (229)
T ss_dssp CHHHHHHHH
T ss_pred hHHHHHHHH
Confidence 333333333
No 157
>PRK11590 hypothetical protein; Provisional
Probab=73.44 E-value=1.9 Score=41.21 Aligned_cols=39 Identities=18% Similarity=0.066 Sum_probs=34.9
Q ss_pred EeeCchHHHHH-HHhh-cccEEEEEcCCcHHHHHHHHHHHC
Q 011855 342 VKQRPHLKTFL-ERVA-EMFEVVIFTASQSIYAAQLLDILD 380 (476)
Q Consensus 342 V~lRPgl~eFL-e~Ls-k~YEIVIfTAs~~~YA~~ILd~LD 380 (476)
+..+||+.+.| +.+. +.+.++|-|++...|+++++..+.
T Consensus 94 ~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~ 134 (211)
T PRK11590 94 VTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTP 134 (211)
T ss_pred CcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcc
Confidence 45689999999 5677 689999999999999999999976
No 158
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=73.41 E-value=1.6 Score=40.98 Aligned_cols=14 Identities=36% Similarity=0.648 Sum_probs=12.6
Q ss_pred EEEEecCccccccc
Q 011855 305 TLVLDLDETLVHST 318 (476)
Q Consensus 305 tLVLDLDeTLVhSs 318 (476)
.++|||||||+.+.
T Consensus 2 ~viFD~DGTLiDs~ 15 (197)
T TIGR01548 2 ALVLDMDGVMADVS 15 (197)
T ss_pred ceEEecCceEEech
Confidence 57999999999986
No 159
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=73.33 E-value=4.9 Score=44.38 Aligned_cols=79 Identities=14% Similarity=0.077 Sum_probs=57.1
Q ss_pred EEeeCchHHHHHHHhh-cc-cEEEEEcCCcHHHHHHHHHHHCCCCCeeeeEEEcccceeeCCceeecccccCCCCCcEEE
Q 011855 341 YVKQRPHLKTFLERVA-EM-FEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAI 418 (476)
Q Consensus 341 ~V~lRPgl~eFLe~Ls-k~-YEIVIfTAs~~~YA~~ILd~LDP~~~lF~~RLyRe~C~~~~g~yiKDLs~LGrdlskVVI 418 (476)
....|||+.+.|++|. +. ++++|-|...+.+|+.+++.++.+. +|... . .....+-+..++....++++
T Consensus 382 ~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~-~f~~~-~-------p~~K~~~v~~l~~~~~~v~~ 452 (556)
T TIGR01525 382 RDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDE-VHAEL-L-------PEDKLAIVKELQEEGGVVAM 452 (556)
T ss_pred cccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCe-eeccC-C-------HHHHHHHHHHHHHcCCEEEE
Confidence 3568999999999997 56 9999999999999999999998854 44321 1 11111223344445568999
Q ss_pred EECCchhhcc
Q 011855 419 IDNSPQVFRL 428 (476)
Q Consensus 419 IDDsp~s~~~ 428 (476)
|-|...-...
T Consensus 453 vGDg~nD~~a 462 (556)
T TIGR01525 453 VGDGINDAPA 462 (556)
T ss_pred EECChhHHHH
Confidence 9999865433
No 160
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=73.06 E-value=6.3 Score=45.05 Aligned_cols=62 Identities=23% Similarity=0.222 Sum_probs=45.0
Q ss_pred CCCceEEEEecCcccccccccccCCCCceEEEEeccccceEEEeeCchHHHHHHHhhc--ccEEEEEcCCcHHHHHHHHH
Q 011855 300 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE--MFEVVIFTASQSIYAAQLLD 377 (476)
Q Consensus 300 ~~kk~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Lsk--~YEIVIfTAs~~~YA~~ILd 377 (476)
..++.++++|+||||+.....+. .....|.+.+.|++|.+ ...|+|-|.-.....++++.
T Consensus 489 ~~~~rLi~~D~DGTL~~~~~~~~------------------~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~ 550 (726)
T PRK14501 489 AASRRLLLLDYDGTLVPFAPDPE------------------LAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFG 550 (726)
T ss_pred hccceEEEEecCccccCCCCCcc------------------cCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhC
Confidence 35577999999999985321110 11235788999999997 78999999998887777665
Q ss_pred HH
Q 011855 378 IL 379 (476)
Q Consensus 378 ~L 379 (476)
.+
T Consensus 551 ~~ 552 (726)
T PRK14501 551 DL 552 (726)
T ss_pred CC
Confidence 43
No 161
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=72.24 E-value=2.1 Score=39.54 Aligned_cols=14 Identities=36% Similarity=0.508 Sum_probs=12.4
Q ss_pred EEEEecCccccccc
Q 011855 305 TLVLDLDETLVHST 318 (476)
Q Consensus 305 tLVLDLDeTLVhSs 318 (476)
+++|||||||+.+.
T Consensus 2 ~viFDlDGTL~ds~ 15 (184)
T TIGR01993 2 VWFFDLDNTLYPHS 15 (184)
T ss_pred eEEEeCCCCCCCCc
Confidence 58999999999874
No 162
>PRK11590 hypothetical protein; Provisional
Probab=71.17 E-value=6.1 Score=37.77 Aligned_cols=17 Identities=29% Similarity=0.421 Sum_probs=14.0
Q ss_pred CceEEEEecCccccccc
Q 011855 302 KSVTLVLDLDETLVHST 318 (476)
Q Consensus 302 kk~tLVLDLDeTLVhSs 318 (476)
++++++|||||||++..
T Consensus 5 ~~k~~iFD~DGTL~~~d 21 (211)
T PRK11590 5 ERRVVFFDLDGTLHQQD 21 (211)
T ss_pred cceEEEEecCCCCcccc
Confidence 45699999999999653
No 163
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=70.93 E-value=2.4 Score=39.98 Aligned_cols=15 Identities=33% Similarity=0.731 Sum_probs=13.3
Q ss_pred eEEEEecCccccccc
Q 011855 304 VTLVLDLDETLVHST 318 (476)
Q Consensus 304 ~tLVLDLDeTLVhSs 318 (476)
..++|||||||+++.
T Consensus 3 ~~viFDlDGTL~ds~ 17 (221)
T TIGR02253 3 KAIFFDLDDTLIDTS 17 (221)
T ss_pred eEEEEeCCCCCcCCC
Confidence 478999999999985
No 164
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=70.31 E-value=6.8 Score=38.79 Aligned_cols=54 Identities=24% Similarity=0.238 Sum_probs=36.0
Q ss_pred ceEEEEecCcccc-cccccccCCCCceEEEEeccccceEEEeeCchHHHHHH-HhhcccEEEEEcCCcHHHHHHHHHHHC
Q 011855 303 SVTLVLDLDETLV-HSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLE-RVAEMFEVVIFTASQSIYAAQLLDILD 380 (476)
Q Consensus 303 k~tLVLDLDeTLV-hSs~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe-~Lsk~YEIVIfTAs~~~YA~~ILd~LD 380 (476)
+++|+.||||||+ ... .-+.-+.++|+ ......-+++-|..+..-+..++....
T Consensus 2 ~~ll~sDlD~Tl~~~~~------------------------~~~~~l~~~l~~~~~~~~~~v~~TGRs~~~~~~~~~~~~ 57 (247)
T PF05116_consen 2 PRLLASDLDGTLIDGDD------------------------EALARLEELLEQQARPEILFVYVTGRSLESVLRLLREYN 57 (247)
T ss_dssp SEEEEEETBTTTBHCHH------------------------HHHHHHHHHHHHHHCCGEEEEEE-SS-HHHHHHHHHHCT
T ss_pred CEEEEEECCCCCcCCCH------------------------HHHHHHHHHHHHhhCCCceEEEECCCCHHHHHHHHHhCC
Confidence 6799999999998 210 01344556666 334567788888888888888888653
No 165
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=70.11 E-value=6.4 Score=38.00 Aligned_cols=54 Identities=19% Similarity=0.151 Sum_probs=34.7
Q ss_pred EEEEecCcccccccccccCCCCceEEEEeccccceEEEeeCchHHHHHHHhhcccEEEEEcCCcHHHHHHHHHHHCCC
Q 011855 305 TLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQSIYAAQLLDILDPD 382 (476)
Q Consensus 305 tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Lsk~YEIVIfTAs~~~YA~~ILd~LDP~ 382 (476)
++++||||||++.... +.|.. +-|+...+...++|-|.-...-+..+++.++..
T Consensus 1 li~~DlDgTLl~~~~~-----------------------~~~~~-~~~~~~~~gi~~viaTGR~~~~v~~~~~~l~l~ 54 (236)
T TIGR02471 1 LIITDLDNTLLGDDEG-----------------------LASFV-ELLRGSGDAVGFGIATGRSVESAKSRYAKLNLP 54 (236)
T ss_pred CeEEeccccccCCHHH-----------------------HHHHH-HHHHhcCCCceEEEEeCCCHHHHHHHHHhCCCC
Confidence 3788999999974210 11222 444433456677888888888888888777643
No 166
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=70.10 E-value=2.4 Score=40.12 Aligned_cols=15 Identities=33% Similarity=0.412 Sum_probs=13.3
Q ss_pred eEEEEecCccccccc
Q 011855 304 VTLVLDLDETLVHST 318 (476)
Q Consensus 304 ~tLVLDLDeTLVhSs 318 (476)
++++|||||||+.+.
T Consensus 2 k~iiFD~DGTL~ds~ 16 (220)
T TIGR03351 2 SLVVLDMAGTTVDED 16 (220)
T ss_pred cEEEEecCCCeeccC
Confidence 478999999999985
No 167
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=69.98 E-value=13 Score=37.41 Aligned_cols=59 Identities=20% Similarity=0.254 Sum_probs=41.3
Q ss_pred ceEEEEecCcccccccccccCCCCceEEEEeccccceEEEeeCchHHHHHHHhh-cccEEEEEcCCcHHHHHHHHHHHCC
Q 011855 303 SVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDP 381 (476)
Q Consensus 303 k~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~~ILd~LDP 381 (476)
.+++.+|||+|||-.+.+.. | +..-|.++. ..|+||..|+-++.-...+-+.|+.
T Consensus 7 ~~lIFtDlD~TLl~~~ye~~-----------------------p-A~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v 62 (274)
T COG3769 7 PLLIFTDLDGTLLPHSYEWQ-----------------------P-AAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGV 62 (274)
T ss_pred ceEEEEcccCcccCCCCCCC-----------------------c-cchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCC
Confidence 46788899999997433221 1 123445555 6799999999888777777788888
Q ss_pred CCCe
Q 011855 382 DGKL 385 (476)
Q Consensus 382 ~~~l 385 (476)
++..
T Consensus 63 ~~~p 66 (274)
T COG3769 63 QGLP 66 (274)
T ss_pred CCCc
Confidence 7643
No 168
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=69.79 E-value=2.3 Score=38.71 Aligned_cols=15 Identities=20% Similarity=0.576 Sum_probs=13.4
Q ss_pred eEEEEecCccccccc
Q 011855 304 VTLVLDLDETLVHST 318 (476)
Q Consensus 304 ~tLVLDLDeTLVhSs 318 (476)
+.++||+||||+.+.
T Consensus 2 ~~iiFD~DGTL~ds~ 16 (185)
T TIGR02009 2 KAVIFDMDGVIVDTA 16 (185)
T ss_pred CeEEEcCCCcccCCh
Confidence 478999999999986
No 169
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=69.29 E-value=2.8 Score=41.99 Aligned_cols=16 Identities=44% Similarity=0.576 Sum_probs=14.1
Q ss_pred ceEEEEecCccccccc
Q 011855 303 SVTLVLDLDETLVHST 318 (476)
Q Consensus 303 k~tLVLDLDeTLVhSs 318 (476)
++.++|||||||+++.
T Consensus 13 ~k~viFDlDGTL~Ds~ 28 (272)
T PRK13223 13 PRLVMFDLDGTLVDSV 28 (272)
T ss_pred CCEEEEcCCCccccCH
Confidence 4599999999999984
No 170
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=69.17 E-value=2.5 Score=40.81 Aligned_cols=16 Identities=38% Similarity=0.598 Sum_probs=14.1
Q ss_pred ceEEEEecCccccccc
Q 011855 303 SVTLVLDLDETLVHST 318 (476)
Q Consensus 303 k~tLVLDLDeTLVhSs 318 (476)
.+.+|||+||||+++.
T Consensus 12 ~k~viFD~DGTL~Ds~ 27 (229)
T PRK13226 12 PRAVLFDLDGTLLDSA 27 (229)
T ss_pred CCEEEEcCcCccccCH
Confidence 3589999999999985
No 171
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=68.57 E-value=2.9 Score=40.72 Aligned_cols=15 Identities=20% Similarity=0.215 Sum_probs=13.3
Q ss_pred eEEEEecCccccccc
Q 011855 304 VTLVLDLDETLVHST 318 (476)
Q Consensus 304 ~tLVLDLDeTLVhSs 318 (476)
+.++||+||||+.+.
T Consensus 3 k~viFD~DGTLiDs~ 17 (253)
T TIGR01422 3 EAVIFDWAGTTVDFG 17 (253)
T ss_pred eEEEEeCCCCeecCC
Confidence 579999999999974
No 172
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=68.12 E-value=3.2 Score=41.54 Aligned_cols=20 Identities=20% Similarity=0.323 Sum_probs=16.6
Q ss_pred CCCCceEEEEecCccccccc
Q 011855 299 QGRKSVTLVLDLDETLVHST 318 (476)
Q Consensus 299 ~~~kk~tLVLDLDeTLVhSs 318 (476)
..+.-+.+||||||||++|.
T Consensus 20 ~~~~~k~vIFDlDGTLvDS~ 39 (260)
T PLN03243 20 LGCGWLGVVLEWEGVIVEDD 39 (260)
T ss_pred hcCCceEEEEeCCCceeCCc
Confidence 35667789999999999984
No 173
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=68.02 E-value=2.6 Score=39.32 Aligned_cols=14 Identities=21% Similarity=0.211 Sum_probs=12.5
Q ss_pred EEEEecCccccccc
Q 011855 305 TLVLDLDETLVHST 318 (476)
Q Consensus 305 tLVLDLDeTLVhSs 318 (476)
.++|||||||+.+.
T Consensus 2 ~viFDlDGTL~d~~ 15 (203)
T TIGR02252 2 LITFDAVGTLLALK 15 (203)
T ss_pred eEEEecCCceeeeC
Confidence 68999999999874
No 174
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=67.69 E-value=12 Score=36.16 Aligned_cols=38 Identities=13% Similarity=0.038 Sum_probs=33.9
Q ss_pred EeeCchHHHHHH-Hhh-cccEEEEEcCCcHHHHHHHHHHH
Q 011855 342 VKQRPHLKTFLE-RVA-EMFEVVIFTASQSIYAAQLLDIL 379 (476)
Q Consensus 342 V~lRPgl~eFLe-~Ls-k~YEIVIfTAs~~~YA~~ILd~L 379 (476)
+.++|++.+.|+ .+. +.+.++|-|++...|++++++..
T Consensus 93 ~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~ 132 (210)
T TIGR01545 93 VTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDS 132 (210)
T ss_pred CCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhc
Confidence 367999999995 777 69999999999999999999774
No 175
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=67.67 E-value=3 Score=40.94 Aligned_cols=16 Identities=31% Similarity=0.453 Sum_probs=14.0
Q ss_pred ceEEEEecCccccccc
Q 011855 303 SVTLVLDLDETLVHST 318 (476)
Q Consensus 303 k~tLVLDLDeTLVhSs 318 (476)
-+.++|||||||+.+.
T Consensus 22 ~k~viFDlDGTLiDs~ 37 (248)
T PLN02770 22 LEAVLFDVDGTLCDSD 37 (248)
T ss_pred cCEEEEcCCCccCcCH
Confidence 3589999999999986
No 176
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=67.13 E-value=3 Score=41.17 Aligned_cols=16 Identities=19% Similarity=0.173 Sum_probs=13.9
Q ss_pred ceEEEEecCccccccc
Q 011855 303 SVTLVLDLDETLVHST 318 (476)
Q Consensus 303 k~tLVLDLDeTLVhSs 318 (476)
-++++|||||||+++.
T Consensus 4 ~k~vIFDlDGTLiDs~ 19 (267)
T PRK13478 4 IQAVIFDWAGTTVDFG 19 (267)
T ss_pred eEEEEEcCCCCeecCC
Confidence 3589999999999984
No 177
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=67.06 E-value=3.2 Score=40.43 Aligned_cols=15 Identities=40% Similarity=0.627 Sum_probs=13.3
Q ss_pred eEEEEecCccccccc
Q 011855 304 VTLVLDLDETLVHST 318 (476)
Q Consensus 304 ~tLVLDLDeTLVhSs 318 (476)
+.++|||||||+.+.
T Consensus 11 k~iiFDlDGTL~D~~ 25 (238)
T PRK10748 11 SALTFDLDDTLYDNR 25 (238)
T ss_pred eeEEEcCcccccCCh
Confidence 589999999999974
No 178
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=66.64 E-value=4.4 Score=44.65 Aligned_cols=85 Identities=13% Similarity=0.120 Sum_probs=60.7
Q ss_pred EEeeCchHHHHHHHhhc-cc-EEEEEcCCcHHHHHHHHHHHCCCCCeeeeEEEcccceeeCCceeecccccCCCCCcEEE
Q 011855 341 YVKQRPHLKTFLERVAE-MF-EVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAI 418 (476)
Q Consensus 341 ~V~lRPgl~eFLe~Lsk-~Y-EIVIfTAs~~~YA~~ILd~LDP~~~lF~~RLyRe~C~~~~g~yiKDLs~LGrdlskVVI 418 (476)
....||++.+.|++|.+ .+ +++|-|+..+.+|..+++.+...+ +|.... .....+-++.++...+++++
T Consensus 360 ~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~-~f~~~~--------p~~K~~~i~~l~~~~~~v~~ 430 (536)
T TIGR01512 360 SDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDE-VHAELL--------PEDKLEIVKELREKYGPVAM 430 (536)
T ss_pred eccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChh-hhhccC--------cHHHHHHHHHHHhcCCEEEE
Confidence 46789999999999984 68 999999999999999999998764 442111 11112334455666689999
Q ss_pred EECCchhhccCCCcee
Q 011855 419 IDNSPQVFRLQVNNGI 434 (476)
Q Consensus 419 IDDsp~s~~~q~~NgI 434 (476)
|-|...-...-...++
T Consensus 431 vGDg~nD~~al~~A~v 446 (536)
T TIGR01512 431 VGDGINDAPALAAADV 446 (536)
T ss_pred EeCCHHHHHHHHhCCE
Confidence 9999865533333334
No 179
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=65.95 E-value=2.6 Score=37.49 Aligned_cols=14 Identities=43% Similarity=0.776 Sum_probs=12.4
Q ss_pred EEEEecCccccccc
Q 011855 305 TLVLDLDETLVHST 318 (476)
Q Consensus 305 tLVLDLDeTLVhSs 318 (476)
+++||+||||+++.
T Consensus 1 ~iifD~DGTL~d~~ 14 (154)
T TIGR01549 1 AILFDIDGTLVDSS 14 (154)
T ss_pred CeEecCCCcccccH
Confidence 47999999999985
No 180
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=64.48 E-value=2.7 Score=39.51 Aligned_cols=13 Identities=54% Similarity=0.708 Sum_probs=11.8
Q ss_pred EEEecCccccccc
Q 011855 306 LVLDLDETLVHST 318 (476)
Q Consensus 306 LVLDLDeTLVhSs 318 (476)
+||||||||+.+.
T Consensus 1 iiFDlDGTL~Ds~ 13 (205)
T TIGR01454 1 VVFDLDGVLVDSF 13 (205)
T ss_pred CeecCcCccccCH
Confidence 5899999999985
No 181
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=64.35 E-value=3.2 Score=37.79 Aligned_cols=14 Identities=21% Similarity=0.605 Sum_probs=12.4
Q ss_pred EEEEecCccccccc
Q 011855 305 TLVLDLDETLVHST 318 (476)
Q Consensus 305 tLVLDLDeTLVhSs 318 (476)
.++||+||||+.+.
T Consensus 1 ~iiFD~DGTL~ds~ 14 (185)
T TIGR01990 1 AVIFDLDGVITDTA 14 (185)
T ss_pred CeEEcCCCccccCh
Confidence 37999999999986
No 182
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=63.43 E-value=2.8 Score=42.05 Aligned_cols=85 Identities=13% Similarity=0.034 Sum_probs=64.6
Q ss_pred EEeeCchHHHHHHHhh-cccEEEEEcCCcHHHHHHHHHHHCCCCCeeeeEEEcccceee---CCceeecccccCCCCCcE
Q 011855 341 YVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFS---DGTYTKDLTVLGVDLAKV 416 (476)
Q Consensus 341 ~V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~~ILd~LDP~~~lF~~RLyRe~C~~~---~g~yiKDLs~LGrdlskV 416 (476)
+....|-+ ++|+++. +.+.|.|.|....++= .++..+... .+|++.+..-.-... +..|.+-|.++|..++.+
T Consensus 112 ~~~~~~~~-~~lq~lR~~g~~l~iisN~d~r~~-~~l~~~~l~-~~fD~vv~S~e~g~~KPDp~If~~al~~l~v~Pee~ 188 (237)
T KOG3085|consen 112 WKYLDGMQ-ELLQKLRKKGTILGIISNFDDRLR-LLLLPLGLS-AYFDFVVESCEVGLEKPDPRIFQLALERLGVKPEEC 188 (237)
T ss_pred ceeccHHH-HHHHHHHhCCeEEEEecCCcHHHH-HHhhccCHH-HhhhhhhhhhhhccCCCChHHHHHHHHHhCCChHHe
Confidence 44555555 9999999 6789999999998887 777777776 588887762222222 346778889999999999
Q ss_pred EEEECCchh-hcc
Q 011855 417 AIIDNSPQV-FRL 428 (476)
Q Consensus 417 VIIDDsp~s-~~~ 428 (476)
|.|||.... +..
T Consensus 189 vhIgD~l~nD~~g 201 (237)
T KOG3085|consen 189 VHIGDLLENDYEG 201 (237)
T ss_pred EEecCccccccHh
Confidence 999999977 533
No 183
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=62.77 E-value=15 Score=37.73 Aligned_cols=91 Identities=11% Similarity=0.137 Sum_probs=51.4
Q ss_pred CceEEEEecCcccccccccccC----CCCceEEEEec-cccceEEEeeCchHHHHHHHhh-cccEEEEEcCCcHHHHHHH
Q 011855 302 KSVTLVLDLDETLVHSTLEYCD----DADFTFTVFFN-MKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQL 375 (476)
Q Consensus 302 kk~tLVLDLDeTLVhSs~~~~~----~~df~~~v~~~-~~~~~~~V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~~I 375 (476)
++-.+|||+|||++........ ...|.- ..++ .-...--..-=|++.+|++++. ..++|++.|.-....-+.=
T Consensus 100 ~~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~-~~w~~~Wv~~~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT 178 (275)
T TIGR01680 100 EKDTFLFNIDGTALSNIPYYKKHGYGSEKFDS-ELYDEEFVNKGEAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVT 178 (275)
T ss_pred CCCEEEEECccccccCHHHHHHhcCCCCcCCh-hhhhHHHHhcccCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHH
Confidence 4579999999999964321110 011110 0000 0000001233589999999997 6799999999887666556
Q ss_pred HHHHCCCCCe-eeeEEEcc
Q 011855 376 LDILDPDGKL-ISRRVYRE 393 (476)
Q Consensus 376 Ld~LDP~~~l-F~~RLyRe 393 (476)
++.|...|-. ..+.+.|.
T Consensus 179 ~~NL~kaGy~~~~~LiLR~ 197 (275)
T TIGR01680 179 EANLKKAGYHTWEKLILKD 197 (275)
T ss_pred HHHHHHcCCCCcceeeecC
Confidence 6666555511 23444564
No 184
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=62.71 E-value=4.5 Score=38.53 Aligned_cols=17 Identities=24% Similarity=0.505 Sum_probs=14.4
Q ss_pred CceEEEEecCccccccc
Q 011855 302 KSVTLVLDLDETLVHST 318 (476)
Q Consensus 302 kk~tLVLDLDeTLVhSs 318 (476)
+.+.++||+||||+++.
T Consensus 6 ~~k~iiFD~DGTL~d~~ 22 (222)
T PRK10826 6 QILAAIFDMDGLLIDSE 22 (222)
T ss_pred cCcEEEEcCCCCCCcCH
Confidence 35689999999999884
No 185
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=62.42 E-value=3.1 Score=38.93 Aligned_cols=13 Identities=54% Similarity=0.802 Sum_probs=11.6
Q ss_pred EEEecCccccccc
Q 011855 306 LVLDLDETLVHST 318 (476)
Q Consensus 306 LVLDLDeTLVhSs 318 (476)
+|||+||||+.+.
T Consensus 1 viFD~DGTL~Ds~ 13 (213)
T TIGR01449 1 VLFDLDGTLVDSA 13 (213)
T ss_pred CeecCCCccccCH
Confidence 5899999999875
No 186
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=62.10 E-value=4.6 Score=37.18 Aligned_cols=16 Identities=31% Similarity=0.439 Sum_probs=13.3
Q ss_pred ceEEEEecCccccccc
Q 011855 303 SVTLVLDLDETLVHST 318 (476)
Q Consensus 303 k~tLVLDLDeTLVhSs 318 (476)
.+++|||+||||+...
T Consensus 4 ~k~viFD~DGTLid~~ 19 (201)
T TIGR01491 4 IKLIIFDLDGTLTDVM 19 (201)
T ss_pred ceEEEEeCCCCCcCCc
Confidence 3589999999999853
No 187
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=62.00 E-value=4.2 Score=41.09 Aligned_cols=18 Identities=28% Similarity=0.381 Sum_probs=15.1
Q ss_pred CCceEEEEecCccccccc
Q 011855 301 RKSVTLVLDLDETLVHST 318 (476)
Q Consensus 301 ~kk~tLVLDLDeTLVhSs 318 (476)
++-..+||||||||+.+.
T Consensus 38 ~~~k~VIFDlDGTLvDS~ 55 (286)
T PLN02779 38 ALPEALLFDCDGVLVETE 55 (286)
T ss_pred cCCcEEEEeCceeEEccc
Confidence 334689999999999986
No 188
>PRK09449 dUMP phosphatase; Provisional
Probab=61.75 E-value=4 Score=38.70 Aligned_cols=14 Identities=43% Similarity=0.520 Sum_probs=12.3
Q ss_pred eEEEEecCcccccc
Q 011855 304 VTLVLDLDETLVHS 317 (476)
Q Consensus 304 ~tLVLDLDeTLVhS 317 (476)
+.++|||||||++.
T Consensus 4 k~iiFDlDGTLid~ 17 (224)
T PRK09449 4 DWILFDADETLFHF 17 (224)
T ss_pred cEEEEcCCCchhcc
Confidence 48999999999974
No 189
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=61.52 E-value=4.2 Score=37.88 Aligned_cols=15 Identities=33% Similarity=0.377 Sum_probs=13.1
Q ss_pred eEEEEecCccccccc
Q 011855 304 VTLVLDLDETLVHST 318 (476)
Q Consensus 304 ~tLVLDLDeTLVhSs 318 (476)
+.++||+||||+++.
T Consensus 2 k~viFD~dgTLiD~~ 16 (198)
T TIGR01428 2 KALVFDVYGTLFDVH 16 (198)
T ss_pred cEEEEeCCCcCccHH
Confidence 378999999999875
No 190
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=61.50 E-value=4 Score=37.09 Aligned_cols=13 Identities=38% Similarity=0.516 Sum_probs=11.8
Q ss_pred EEEecCccccccc
Q 011855 306 LVLDLDETLVHST 318 (476)
Q Consensus 306 LVLDLDeTLVhSs 318 (476)
|+|||||||+.+.
T Consensus 2 viFD~DGTL~D~~ 14 (175)
T TIGR01493 2 MVFDVYGTLVDVH 14 (175)
T ss_pred eEEecCCcCcccH
Confidence 7899999999875
No 191
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=61.38 E-value=4.1 Score=38.19 Aligned_cols=15 Identities=40% Similarity=0.654 Sum_probs=13.2
Q ss_pred eEEEEecCccccccc
Q 011855 304 VTLVLDLDETLVHST 318 (476)
Q Consensus 304 ~tLVLDLDeTLVhSs 318 (476)
+.++||+||||+++.
T Consensus 2 k~viFD~DGTL~d~~ 16 (224)
T TIGR02254 2 KTLLFDLDDTILDFQ 16 (224)
T ss_pred CEEEEcCcCcccccc
Confidence 479999999999975
No 192
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=61.09 E-value=4.8 Score=37.89 Aligned_cols=15 Identities=20% Similarity=0.419 Sum_probs=13.1
Q ss_pred eEEEEecCccccccc
Q 011855 304 VTLVLDLDETLVHST 318 (476)
Q Consensus 304 ~tLVLDLDeTLVhSs 318 (476)
+.++|||||||+++.
T Consensus 3 k~viFDldGtL~d~~ 17 (211)
T TIGR02247 3 KAVIFDFGGVLLPSP 17 (211)
T ss_pred eEEEEecCCceecCH
Confidence 479999999999874
No 193
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=60.60 E-value=4.4 Score=38.17 Aligned_cols=15 Identities=47% Similarity=0.627 Sum_probs=13.2
Q ss_pred eEEEEecCccccccc
Q 011855 304 VTLVLDLDETLVHST 318 (476)
Q Consensus 304 ~tLVLDLDeTLVhSs 318 (476)
..++||+||||+++.
T Consensus 7 ~~iiFD~DGTL~d~~ 21 (226)
T PRK13222 7 RAVAFDLDGTLVDSA 21 (226)
T ss_pred cEEEEcCCcccccCH
Confidence 489999999999874
No 194
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=59.04 E-value=4.6 Score=35.44 Aligned_cols=13 Identities=46% Similarity=0.828 Sum_probs=11.6
Q ss_pred EEEecCccccccc
Q 011855 306 LVLDLDETLVHST 318 (476)
Q Consensus 306 LVLDLDeTLVhSs 318 (476)
++||+||||+++.
T Consensus 1 iifD~dgtL~d~~ 13 (176)
T PF13419_consen 1 IIFDLDGTLVDTD 13 (176)
T ss_dssp EEEESBTTTEEHH
T ss_pred cEEECCCCcEeCH
Confidence 6899999999875
No 195
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=58.90 E-value=5.3 Score=37.85 Aligned_cols=16 Identities=38% Similarity=0.424 Sum_probs=13.7
Q ss_pred ceEEEEecCccccccc
Q 011855 303 SVTLVLDLDETLVHST 318 (476)
Q Consensus 303 k~tLVLDLDeTLVhSs 318 (476)
.+.++||+||||+.+.
T Consensus 4 ~~~viFD~DGTL~d~~ 19 (221)
T PRK10563 4 IEAVFFDCDGTLVDSE 19 (221)
T ss_pred CCEEEECCCCCCCCCh
Confidence 3589999999999874
No 196
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=56.53 E-value=5 Score=36.20 Aligned_cols=13 Identities=38% Similarity=0.769 Sum_probs=11.9
Q ss_pred EEEecCccccccc
Q 011855 306 LVLDLDETLVHST 318 (476)
Q Consensus 306 LVLDLDeTLVhSs 318 (476)
++|||||||+.+.
T Consensus 2 vlFDlDgtLv~~~ 14 (183)
T TIGR01509 2 ILFDLDGVLVDTS 14 (183)
T ss_pred eeeccCCceechH
Confidence 7999999999985
No 197
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=56.40 E-value=22 Score=33.60 Aligned_cols=62 Identities=18% Similarity=0.245 Sum_probs=40.2
Q ss_pred EEEecCcccccccccccCCCCceEEEEeccccceEEEeeCchHHHHHHHhh-cccEEEEEcCCcHHHHHHHHHHH
Q 011855 306 LVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDIL 379 (476)
Q Consensus 306 LVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~~ILd~L 379 (476)
+|.|+||||--|-.. ....++ .... +.|||+.++..+++ +.|.++=-|+-.-..|...-+.|
T Consensus 2 VvsDIDGTiT~SD~~-----G~i~~~----~G~d---~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L 64 (157)
T PF08235_consen 2 VVSDIDGTITKSDVL-----GHILPI----LGKD---WTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWL 64 (157)
T ss_pred EEEeccCCcCccchh-----hhhhhc----cCch---hhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHH
Confidence 688999999766310 001111 1111 67999999999999 56888888887765555544443
No 198
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=56.03 E-value=17 Score=35.30 Aligned_cols=50 Identities=22% Similarity=0.163 Sum_probs=29.8
Q ss_pred EEecCcccccccccccCCCCceEEEEeccccceEEEeeCchHHHHHHHhhcccE--EEEEcCCcHHHHHH
Q 011855 307 VLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFE--VVIFTASQSIYAAQ 374 (476)
Q Consensus 307 VLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Lsk~YE--IVIfTAs~~~YA~~ 374 (476)
.||.||||.-....+ --.+.-|++.+.|+.|++... |+|-|.-...-.+.
T Consensus 1 ~lDyDGTL~p~~~~p------------------~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~ 52 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDP------------------DAAVPPPELRELLRALAADPNNTVAIVSGRSLDDLER 52 (235)
T ss_dssp EEE-TTTSS---S-G------------------GG----HHHHHHHHHHHHHSE--EEEE-SS-HHHHHH
T ss_pred CcccCCccCCCCCCc------------------cccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHH
Confidence 589999997543221 124567999999999998766 88888877766333
No 199
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=55.04 E-value=10 Score=34.56 Aligned_cols=47 Identities=17% Similarity=0.260 Sum_probs=37.6
Q ss_pred eCchHH----HHHHHhh-cccEEEEEcCCcHHHHHHHHHHHCCCC-CeeeeEE
Q 011855 344 QRPHLK----TFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDG-KLISRRV 390 (476)
Q Consensus 344 lRPgl~----eFLe~Ls-k~YEIVIfTAs~~~YA~~ILd~LDP~~-~lF~~RL 390 (476)
++|++. +||+.+. +.++++|-|++...+++++++.+.-.. ..+..++
T Consensus 86 ~~~~~~~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~ 138 (192)
T PF12710_consen 86 LFPGFIPDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNEL 138 (192)
T ss_dssp HCTTCHTTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEE
T ss_pred cCcCchhhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEee
Confidence 457777 9999985 789999999999999999999887653 2344555
No 200
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=53.31 E-value=23 Score=41.67 Aligned_cols=59 Identities=17% Similarity=0.122 Sum_probs=39.9
Q ss_pred CCceEEEEecCcccccccccccCCCCceEEEEeccccceEEEeeCchHHHHHHHhh--cccEEEEEcCCcHHHHHHHHHH
Q 011855 301 RKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVA--EMFEVVIFTASQSIYAAQLLDI 378 (476)
Q Consensus 301 ~kk~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Ls--k~YEIVIfTAs~~~YA~~ILd~ 378 (476)
.++..|+||+||||+..... -+..-|++.+-|++|+ +...++|-|.-...-.+.++..
T Consensus 594 ~~~rlI~LDyDGTLlp~~~~--------------------~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~ 653 (854)
T PLN02205 594 TTTRAILLDYDGTLMPQASI--------------------DKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSP 653 (854)
T ss_pred hcCeEEEEecCCcccCCccc--------------------cCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCC
Confidence 45678999999999954210 0122467888888875 4577888887777776666644
Q ss_pred H
Q 011855 379 L 379 (476)
Q Consensus 379 L 379 (476)
+
T Consensus 654 ~ 654 (854)
T PLN02205 654 C 654 (854)
T ss_pred C
Confidence 4
No 201
>PLN02382 probable sucrose-phosphatase
Probab=50.56 E-value=40 Score=36.20 Aligned_cols=17 Identities=35% Similarity=0.530 Sum_probs=14.3
Q ss_pred CCceEEEEecCcccccc
Q 011855 301 RKSVTLVLDLDETLVHS 317 (476)
Q Consensus 301 ~kk~tLVLDLDeTLVhS 317 (476)
.+++.|+.||||||+..
T Consensus 7 ~~~~lI~sDLDGTLL~~ 23 (413)
T PLN02382 7 SPRLMIVSDLDHTMVDH 23 (413)
T ss_pred CCCEEEEEcCCCcCcCC
Confidence 45789999999999954
No 202
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=49.00 E-value=32 Score=40.14 Aligned_cols=64 Identities=17% Similarity=0.156 Sum_probs=45.0
Q ss_pred CCCceEEEEecCcccccccccccCCCCceEEEEeccccceEEEeeCchHHHHHHHhhc--ccEEEEEcCCcHHHHHHHHH
Q 011855 300 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE--MFEVVIFTASQSIYAAQLLD 377 (476)
Q Consensus 300 ~~kk~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Lsk--~YEIVIfTAs~~~YA~~ILd 377 (476)
..++..|+||.||||+.....+. ...-+..-|++.+-|+.|++ .-.|+|-|.-...-.++++.
T Consensus 504 ~a~~rll~LDyDGTL~~~~~~~~---------------~p~~a~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~ 568 (797)
T PLN03063 504 KSNNRLLILGFYGTLTEPRNSQI---------------KEMDLGLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFG 568 (797)
T ss_pred hccCeEEEEecCccccCCCCCcc---------------ccccCCCCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhC
Confidence 34567889999999985322110 11124456899999999985 47899999888877777775
Q ss_pred H
Q 011855 378 I 378 (476)
Q Consensus 378 ~ 378 (476)
.
T Consensus 569 ~ 569 (797)
T PLN03063 569 E 569 (797)
T ss_pred C
Confidence 3
No 203
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=46.90 E-value=7.8 Score=41.69 Aligned_cols=16 Identities=31% Similarity=0.559 Sum_probs=14.0
Q ss_pred ceEEEEecCccccccc
Q 011855 303 SVTLVLDLDETLVHST 318 (476)
Q Consensus 303 k~tLVLDLDeTLVhSs 318 (476)
-..++|||||||+++.
T Consensus 241 ~k~vIFDlDGTLiDs~ 256 (459)
T PRK06698 241 LQALIFDMDGTLFQTD 256 (459)
T ss_pred hhheeEccCCceecch
Confidence 3579999999999986
No 204
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=45.52 E-value=11 Score=40.25 Aligned_cols=19 Identities=5% Similarity=0.279 Sum_probs=15.8
Q ss_pred CCCceEEEEecCccccccc
Q 011855 300 GRKSVTLVLDLDETLVHST 318 (476)
Q Consensus 300 ~~kk~tLVLDLDeTLVhSs 318 (476)
..+-+.+|||||||||.+.
T Consensus 128 ~~~~~~VIFDlDGTLIDS~ 146 (381)
T PLN02575 128 GCGWLGAIFEWEGVIIEDN 146 (381)
T ss_pred cCCCCEEEEcCcCcceeCH
Confidence 3466789999999999875
No 205
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=45.44 E-value=12 Score=35.83 Aligned_cols=16 Identities=25% Similarity=0.515 Sum_probs=13.4
Q ss_pred ceEEEEecCccccccc
Q 011855 303 SVTLVLDLDETLVHST 318 (476)
Q Consensus 303 k~tLVLDLDeTLVhSs 318 (476)
++++++|+||||+..-
T Consensus 3 ~~~vifDfDgTi~~~d 18 (219)
T PRK09552 3 SIQIFCDFDGTITNND 18 (219)
T ss_pred CcEEEEcCCCCCCcch
Confidence 4589999999998764
No 206
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=44.14 E-value=25 Score=35.58 Aligned_cols=100 Identities=18% Similarity=0.257 Sum_probs=56.3
Q ss_pred EEeeCchHHHHHHHhhcc-cEEEEEcCCcHHHHHHHHHHHC---CCCCeeeeEEEcccc-e---eeC---Cceeeccccc
Q 011855 341 YVKQRPHLKTFLERVAEM-FEVVIFTASQSIYAAQLLDILD---PDGKLISRRVYRESC-I---FSD---GTYTKDLTVL 409 (476)
Q Consensus 341 ~V~lRPgl~eFLe~Lsk~-YEIVIfTAs~~~YA~~ILd~LD---P~~~lF~~RLyRe~C-~---~~~---g~yiKDLs~L 409 (476)
.+.+|.|+.+|++.|.++ .-+.|||||.-.-.+.+|+.-. |.-+.++..+.=+.- . +.. ..|.|+-..+
T Consensus 88 ~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~Nv~VvSN~M~Fd~~g~l~gF~~~lIH~~NKn~~~l 167 (246)
T PF05822_consen 88 DIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPNVKVVSNFMDFDEDGVLVGFKGPLIHTFNKNESAL 167 (246)
T ss_dssp ---B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTTEEEEEE-EEE-TTSBEEEE-SS---TT-HHHHHH
T ss_pred chhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCCeEEEeeeEEECCcceEeecCCCceEEeeCCcccc
Confidence 488999999999999965 8999999999999999999863 222344544432211 1 111 1234553333
Q ss_pred --------CCCCCcEEEEECCchhhcc-----CCCceeeecccc
Q 011855 410 --------GVDLAKVAIIDNSPQVFRL-----QVNNGIPIESWF 440 (476)
Q Consensus 410 --------GrdlskVVIIDDsp~s~~~-----q~~NgIpI~~f~ 440 (476)
-....+||++=|+..-..+ ..+|.|.|.=..
T Consensus 168 ~~~~~~~~~~~R~NvlLlGDslgD~~Ma~G~~~~~~~lkIGFLn 211 (246)
T PF05822_consen 168 EDSPYFKQLKKRTNVLLLGDSLGDLHMADGVPDEENVLKIGFLN 211 (246)
T ss_dssp TTHHHHHCTTT--EEEEEESSSGGGGTTTT-S--SEEEEEEEE-
T ss_pred cCchHHHHhccCCcEEEecCccCChHhhcCCCccccEEEEEecc
Confidence 1345789999999965432 345666664443
No 207
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=43.75 E-value=13 Score=36.01 Aligned_cols=16 Identities=31% Similarity=0.436 Sum_probs=13.7
Q ss_pred ceEEEEecCccccccc
Q 011855 303 SVTLVLDLDETLVHST 318 (476)
Q Consensus 303 k~tLVLDLDeTLVhSs 318 (476)
+++.+||+||||++.-
T Consensus 5 ~~la~FDfDgTLt~~d 20 (210)
T TIGR01545 5 KRIIFFDLDGTLHQQD 20 (210)
T ss_pred CcEEEEcCCCCCccCc
Confidence 5688999999999873
No 208
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=43.19 E-value=15 Score=34.58 Aligned_cols=16 Identities=31% Similarity=0.463 Sum_probs=13.8
Q ss_pred ceEEEEecCccccccc
Q 011855 303 SVTLVLDLDETLVHST 318 (476)
Q Consensus 303 k~tLVLDLDeTLVhSs 318 (476)
.+.++||+||||++..
T Consensus 4 ~k~i~FD~d~TL~d~~ 19 (229)
T COG1011 4 IKAILFDLDGTLLDFD 19 (229)
T ss_pred eeEEEEecCCcccccc
Confidence 4689999999999874
No 209
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=43.16 E-value=46 Score=39.75 Aligned_cols=71 Identities=15% Similarity=0.185 Sum_probs=48.2
Q ss_pred CCCceEEEEecCcccccccccccCCCCceEEEEeccccceEEEeeCchHHHHHHHhhc--ccEEEEEcCCcHHHHHHHHH
Q 011855 300 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAE--MFEVVIFTASQSIYAAQLLD 377 (476)
Q Consensus 300 ~~kk~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Lsk--~YEIVIfTAs~~~YA~~ILd 377 (476)
..++..|+||.||||+-....+...... .....+..-|.+.+-|+.|++ ...|+|-|.-...-.+.++.
T Consensus 588 ~a~~RLlfLDyDGTLap~~~~P~~~~~~---------~~~~~a~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg 658 (934)
T PLN03064 588 QSNNRLLILGFNATLTEPVDTPGRRGDQ---------IKEMELRLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFG 658 (934)
T ss_pred hccceEEEEecCceeccCCCCccccccc---------ccccccCCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhC
Confidence 3456789999999998653222100000 001124456889999999995 48899999999888888775
Q ss_pred HH
Q 011855 378 IL 379 (476)
Q Consensus 378 ~L 379 (476)
.+
T Consensus 659 ~~ 660 (934)
T PLN03064 659 EF 660 (934)
T ss_pred CC
Confidence 54
No 210
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=41.79 E-value=14 Score=34.58 Aligned_cols=14 Identities=21% Similarity=0.437 Sum_probs=12.4
Q ss_pred EEEEecCccccccc
Q 011855 305 TLVLDLDETLVHST 318 (476)
Q Consensus 305 tLVLDLDeTLVhSs 318 (476)
++||||||||++..
T Consensus 2 ~viFDldgvL~d~~ 15 (199)
T PRK09456 2 LYIFDLGNVIVDID 15 (199)
T ss_pred EEEEeCCCccccCc
Confidence 68999999999874
No 211
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=37.36 E-value=51 Score=35.66 Aligned_cols=58 Identities=16% Similarity=0.141 Sum_probs=38.6
Q ss_pred CCceEEEEecCcccccccccccCCCCceEEEEeccccceEEEeeCchHHHHHHHhhcccEEEEEcCCc
Q 011855 301 RKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIFTASQ 368 (476)
Q Consensus 301 ~kk~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Lsk~YEIVIfTAs~ 368 (476)
...+..-||+|||||...... .+....+.|.+..++.-..+=+.=.+.|-++|||...
T Consensus 73 ~~~K~i~FD~dgtlI~t~sg~----------vf~~~~~dw~~l~~~vp~Klktl~~~g~~l~iftnq~ 130 (422)
T KOG2134|consen 73 GGSKIIMFDYDGTLIDTKSGK----------VFPKGSMDWRILFPEVPSKLKTLYQDGIKLFIFTNQN 130 (422)
T ss_pred CCcceEEEecCCceeecCCcc----------eeeccCccceeeccccchhhhhhccCCeEEEEEeccc
Confidence 345688999999999875321 1222344566666666666544445789999999765
No 212
>TIGR02826 RNR_activ_nrdG3 anaerobic ribonucleoside-triphosphate reductase activating protein. Members of this family represent a set of proteins related to, yet architecturally different from, the activating protein for the glycine radical-containing, oxygen-sensitive ribonucleoside-triphosphate reductase (RNR) as described in model TIGR02491. Members of this family are found paired with members of a similarly divergent set of anaerobic ribonucleoside-triphosphate reductases. Identification of this protein as an RNR activitating protein is partly from pairing with a candidate RNR. It is further supported by our finding that upstream of these operons are examples of a conserved regulatory element (described Rodionov and Gelfand) that is found in nearly all bacteria and that occurs specifically upstream of operons for all three classes of RNR genes.
Probab=37.10 E-value=70 Score=29.57 Aligned_cols=71 Identities=23% Similarity=0.277 Sum_probs=45.6
Q ss_pred EEeccccceEEEeeCchHHHHHHHhhc-ccEEEEEcCCcHH-HHHHHHHHHCCCCCeeeeEEEcccceeeCCceeecccc
Q 011855 331 VFFNMKEHTVYVKQRPHLKTFLERVAE-MFEVVIFTASQSI-YAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTV 408 (476)
Q Consensus 331 v~~~~~~~~~~V~lRPgl~eFLe~Lsk-~YEIVIfTAs~~~-YA~~ILd~LDP~~~lF~~RLyRe~C~~~~g~yiKDLs~ 408 (476)
+.+.+.+ ..++.+.++++.+.+ .+.+.|+|.+... --+.+++.+|- ...|.|+.+|..
T Consensus 65 Vt~SGGE-----l~~~~l~~ll~~lk~~Gl~i~l~Tg~~~~~~~~~il~~iD~---------------l~~g~y~~~~~~ 124 (147)
T TIGR02826 65 VLFLGGE-----WNREALLSLLKIFKEKGLKTCLYTGLEPKDIPLELVQHLDY---------------LKTGRWIHTRGG 124 (147)
T ss_pred EEEechh-----cCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHhCCE---------------EEEChHHHHcCC
Confidence 4455555 367899999999985 5899999986542 23345554442 245566666655
Q ss_pred cCCCCCcEEEEEC
Q 011855 409 LGVDLAKVAIIDN 421 (476)
Q Consensus 409 LGrdlskVVIIDD 421 (476)
+++.-+|=+|+|-
T Consensus 125 ~~~~~sNQ~~~~~ 137 (147)
T TIGR02826 125 LGSPTTNQIFIDL 137 (147)
T ss_pred CCCCCcCceEEEC
Confidence 5554557777774
No 213
>PRK10671 copA copper exporting ATPase; Provisional
Probab=33.79 E-value=34 Score=39.88 Aligned_cols=83 Identities=13% Similarity=0.143 Sum_probs=58.0
Q ss_pred eeCchHHHHHHHhh-cccEEEEEcCCcHHHHHHHHHHHCCCCCeeeeEEEcccceeeCCceeecccccCCCCCcEEEEEC
Q 011855 343 KQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDN 421 (476)
Q Consensus 343 ~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~~ILd~LDP~~~lF~~RLyRe~C~~~~g~yiKDLs~LGrdlskVVIIDD 421 (476)
..||++.+.|+++. +.+++++.|...+..|+.+++.++-.. +|.... +....+-++.++...+++++|-|
T Consensus 650 ~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~-~~~~~~--------p~~K~~~i~~l~~~~~~v~~vGD 720 (834)
T PRK10671 650 PLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDE-VIAGVL--------PDGKAEAIKRLQSQGRQVAMVGD 720 (834)
T ss_pred cchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCE-EEeCCC--------HHHHHHHHHHHhhcCCEEEEEeC
Confidence 56999999999997 569999999999999999999988753 332211 11112233445556678999999
Q ss_pred CchhhccCCCcee
Q 011855 422 SPQVFRLQVNNGI 434 (476)
Q Consensus 422 sp~s~~~q~~NgI 434 (476)
...-...-...++
T Consensus 721 g~nD~~al~~Agv 733 (834)
T PRK10671 721 GINDAPALAQADV 733 (834)
T ss_pred CHHHHHHHHhCCe
Confidence 9865543333444
No 214
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=33.39 E-value=1.2e+02 Score=28.52 Aligned_cols=66 Identities=26% Similarity=0.346 Sum_probs=34.9
Q ss_pred eCchHHHHHHHhh-cccEEEEEcCCcHHHHHHHHHHHCCCCCeeeeEEEcccceeeCCceeecccccCCCCCcEEEEECC
Q 011855 344 QRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLLDILDPDGKLISRRVYRESCIFSDGTYTKDLTVLGVDLAKVAIIDNS 422 (476)
Q Consensus 344 lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~~ILd~LDP~~~lF~~RLyRe~C~~~~g~yiKDLs~LGrdlskVVIIDDs 422 (476)
.|-.+.+||+.+. +.-.|++|-|+.+.- .+|..++....++. .+||++
T Consensus 53 ~~~~l~~~L~~~~~~gk~I~~yGA~~kg~--tlln~~g~~~~~I~-----------------------------~vvD~n 101 (160)
T PF08484_consen 53 SKAELREFLEKLKAEGKRIAGYGAGAKGN--TLLNYFGLDNDLID-----------------------------YVVDDN 101 (160)
T ss_dssp HHHHHHHHHHHHHHTT--EEEE---SHHH--HHHHHHT--TTTS-------------------------------EEES-
T ss_pred HHHHHHHHHHHHHHcCCEEEEECcchHHH--HHHHHhCCCcceeE-----------------------------EEEeCC
Confidence 4566778888887 566799999998754 56777777654442 366666
Q ss_pred chhh-ccCCCceeeecccc
Q 011855 423 PQVF-RLQVNNGIPIESWF 440 (476)
Q Consensus 423 p~s~-~~q~~NgIpI~~f~ 440 (476)
|... ++-|..+|||.+..
T Consensus 102 p~K~G~~~PGt~ipI~~p~ 120 (160)
T PF08484_consen 102 PLKQGKYLPGTHIPIVSPE 120 (160)
T ss_dssp GGGTTEE-TTT--EEEEGG
T ss_pred hhhcCcccCCCCCeECCHH
Confidence 6555 33555666666553
No 215
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=32.56 E-value=76 Score=34.76 Aligned_cols=52 Identities=23% Similarity=0.388 Sum_probs=40.4
Q ss_pred EEEeeCchHHHHHHHhhccc-EEEEEcCCcHHHHHHHHHHH-CC-------CCCeeeeEEE
Q 011855 340 VYVKQRPHLKTFLERVAEMF-EVVIFTASQSIYAAQLLDIL-DP-------DGKLISRRVY 391 (476)
Q Consensus 340 ~~V~lRPgl~eFLe~Lsk~Y-EIVIfTAs~~~YA~~ILd~L-DP-------~~~lF~~RLy 391 (476)
-||.+-|.+..+|++|.+.- .+.+-|++...|++.+++.+ ++ ++.||+-++.
T Consensus 180 kYi~k~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv 240 (448)
T PF05761_consen 180 KYIHKDPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIV 240 (448)
T ss_dssp CCEE--CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEE
T ss_pred HHccCCchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEE
Confidence 46778999999999999664 89999999999999999996 45 5677877766
No 216
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=32.12 E-value=21 Score=32.10 Aligned_cols=13 Identities=31% Similarity=0.560 Sum_probs=11.0
Q ss_pred EEEecCccccccc
Q 011855 306 LVLDLDETLVHST 318 (476)
Q Consensus 306 LVLDLDeTLVhSs 318 (476)
+|+|+||||+...
T Consensus 2 ~~fD~DgTl~~~~ 14 (177)
T TIGR01488 2 AIFDFDGTLTRQD 14 (177)
T ss_pred EEecCccccccch
Confidence 6899999999753
No 217
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=30.93 E-value=27 Score=31.74 Aligned_cols=13 Identities=38% Similarity=0.682 Sum_probs=11.2
Q ss_pred EEEecCccccccc
Q 011855 306 LVLDLDETLVHST 318 (476)
Q Consensus 306 LVLDLDeTLVhSs 318 (476)
+++|+||||+...
T Consensus 1 v~fD~DGTL~~~~ 13 (192)
T PF12710_consen 1 VIFDFDGTLTDSD 13 (192)
T ss_dssp EEEESBTTTBSSH
T ss_pred eEEecCcCeecCC
Confidence 5899999998764
No 218
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=30.54 E-value=40 Score=37.29 Aligned_cols=23 Identities=30% Similarity=0.382 Sum_probs=19.2
Q ss_pred EEEEEcCCcHHHHHHHHHH-HCCC
Q 011855 360 EVVIFTASQSIYAAQLLDI-LDPD 382 (476)
Q Consensus 360 EIVIfTAs~~~YA~~ILd~-LDP~ 382 (476)
+.+|-||+.+.|++++++. |+-+
T Consensus 124 ~~vvVSASp~~~Vepfa~~~LGid 147 (497)
T PLN02177 124 KRYIITASPRIMVEPFVKTFLGAD 147 (497)
T ss_pred CEEEEECCcHHHHHHHHHHcCCCC
Confidence 4599999999999999976 6554
No 219
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=28.95 E-value=27 Score=32.34 Aligned_cols=13 Identities=31% Similarity=0.445 Sum_probs=11.1
Q ss_pred EEEecCccccccc
Q 011855 306 LVLDLDETLVHST 318 (476)
Q Consensus 306 LVLDLDeTLVhSs 318 (476)
.+||+||||+...
T Consensus 2 a~FD~DgTL~~~~ 14 (202)
T TIGR01490 2 AFFDFDGTLTAKD 14 (202)
T ss_pred eEEccCCCCCCCc
Confidence 6899999999853
No 220
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=24.54 E-value=43 Score=40.42 Aligned_cols=18 Identities=28% Similarity=0.466 Sum_probs=15.0
Q ss_pred CCceEEEEecCccccccc
Q 011855 301 RKSVTLVLDLDETLVHST 318 (476)
Q Consensus 301 ~kk~tLVLDLDeTLVhSs 318 (476)
++-+.++|||||||+++.
T Consensus 73 ~~ikaVIFDlDGTLiDS~ 90 (1057)
T PLN02919 73 GKVSAVLFDMDGVLCNSE 90 (1057)
T ss_pred CCCCEEEECCCCCeEeCh
Confidence 345589999999999986
No 221
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=23.27 E-value=62 Score=31.93 Aligned_cols=90 Identities=18% Similarity=0.234 Sum_probs=60.7
Q ss_pred eeCchHHHHHHHhh-cccEEEEEcCCcHHHHHHHH----HHHCCCCCeeeeEEEccccee-eCCceeecccccCCCCCcE
Q 011855 343 KQRPHLKTFLERVA-EMFEVVIFTASQSIYAAQLL----DILDPDGKLISRRVYRESCIF-SDGTYTKDLTVLGVDLAKV 416 (476)
Q Consensus 343 ~lRPgl~eFLe~Ls-k~YEIVIfTAs~~~YA~~IL----d~LDP~~~lF~~RLyRe~C~~-~~g~yiKDLs~LGrdlskV 416 (476)
.+-|.+-++|++-. ..-.|+||++|+-. |.+++ +..|..+ ||+..+-...-.. ..+.|.|.+..+|.+++.+
T Consensus 103 hlypDav~~ik~wk~~g~~vyiYSSGSV~-AQkL~Fghs~agdL~~-lfsGyfDttiG~KrE~~SY~kIa~~iGl~p~ei 180 (229)
T COG4229 103 HLYPDAVQAIKRWKALGMRVYIYSSGSVK-AQKLFFGHSDAGDLNS-LFSGYFDTTIGKKRESQSYAKIAGDIGLPPAEI 180 (229)
T ss_pred ccCHhHHHHHHHHHHcCCcEEEEcCCCch-hHHHhhcccccccHHh-hhcceeeccccccccchhHHHHHHhcCCCchhe
Confidence 34688999998887 66899999999743 34333 2233333 5655544322111 1357889999999999999
Q ss_pred EEEECCchhhccCCCcee
Q 011855 417 AIIDNSPQVFRLQVNNGI 434 (476)
Q Consensus 417 VIIDDsp~s~~~q~~NgI 434 (476)
+++-|.+.......+-|+
T Consensus 181 lFLSDn~~EL~AA~~vGl 198 (229)
T COG4229 181 LFLSDNPEELKAAAGVGL 198 (229)
T ss_pred EEecCCHHHHHHHHhcch
Confidence 999999987655444444
No 222
>cd06537 CIDE_N_B CIDE_N domain of CIDE-B proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45 and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=23.08 E-value=1.3e+02 Score=25.69 Aligned_cols=15 Identities=53% Similarity=0.574 Sum_probs=13.3
Q ss_pred ceEEEEecCcccccc
Q 011855 303 SVTLVLDLDETLVHS 317 (476)
Q Consensus 303 k~tLVLDLDeTLVhS 317 (476)
..+|||+=|||.|.+
T Consensus 39 ~~~lvLeeDGT~Vd~ 53 (81)
T cd06537 39 VLTLVLEEDGTAVDS 53 (81)
T ss_pred ceEEEEecCCCEEcc
Confidence 479999999999976
No 223
>cd06539 CIDE_N_A CIDE_N domain of CIDE-A proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45, and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, the CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=21.74 E-value=1.4e+02 Score=25.25 Aligned_cols=15 Identities=53% Similarity=0.636 Sum_probs=13.3
Q ss_pred ceEEEEecCcccccc
Q 011855 303 SVTLVLDLDETLVHS 317 (476)
Q Consensus 303 k~tLVLDLDeTLVhS 317 (476)
..+|||+=|||.|.+
T Consensus 40 ~~~lvL~eDGT~Vd~ 54 (78)
T cd06539 40 LVTLVLEEDGTVVDT 54 (78)
T ss_pred CcEEEEeCCCCEEcc
Confidence 579999999999976
No 224
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=21.59 E-value=1.3e+02 Score=30.15 Aligned_cols=42 Identities=19% Similarity=0.343 Sum_probs=30.3
Q ss_pred CCCceEEEEecCcccccccccccCCCCceEEEEeccccceEEEeeCchHHHHHHHhhcccEEEEE
Q 011855 300 GRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFLERVAEMFEVVIF 364 (476)
Q Consensus 300 ~~kk~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFLe~Lsk~YEIVIf 364 (476)
+.++.++.+|.||||.-.. -+.-|-+.+||+.+.+...|.+-
T Consensus 8 r~~~~l~lfdvdgtLt~~r-----------------------~~~~~e~~~~l~~lr~~v~ig~V 49 (252)
T KOG3189|consen 8 RDEETLCLFDVDGTLTPPR-----------------------QKVTPEMLEFLQKLRKKVTIGFV 49 (252)
T ss_pred cCCceEEEEecCCcccccc-----------------------ccCCHHHHHHHHHHhhheEEEEe
Confidence 3445667779999996432 23468899999999988776643
No 225
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=21.17 E-value=54 Score=30.09 Aligned_cols=14 Identities=21% Similarity=0.368 Sum_probs=12.0
Q ss_pred EEEEecCccccccc
Q 011855 305 TLVLDLDETLVHST 318 (476)
Q Consensus 305 tLVLDLDeTLVhSs 318 (476)
+++||.||||....
T Consensus 3 ~i~fDktGTLt~~~ 16 (215)
T PF00702_consen 3 AICFDKTGTLTQGK 16 (215)
T ss_dssp EEEEECCTTTBESH
T ss_pred EEEEecCCCcccCe
Confidence 79999999997653
No 226
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=20.73 E-value=81 Score=31.07 Aligned_cols=125 Identities=22% Similarity=0.338 Sum_probs=67.0
Q ss_pred CCCCceEEEEecCcccccccccccCCCCceEEEEeccccceEEEeeCchHHHHH------HHhhcccEEEEEcCCcHHHH
Q 011855 299 QGRKSVTLVLDLDETLVHSTLEYCDDADFTFTVFFNMKEHTVYVKQRPHLKTFL------ERVAEMFEVVIFTASQSIYA 372 (476)
Q Consensus 299 ~~~kk~tLVLDLDeTLVhSs~~~~~~~df~~~v~~~~~~~~~~V~lRPgl~eFL------e~Lsk~YEIVIfTAs~~~YA 372 (476)
..+++.++-||+|.|++.++.- | ..++ -+.-||-++|| +.+.+..+-. +-.++||
T Consensus 59 eG~~Pi~VsFDIDDTvLFsSp~------F-----~~Gk-----~~~sPgs~DyLknq~FW~~vn~g~D~~---SIPKevA 119 (237)
T COG3700 59 EGRPPIAVSFDIDDTVLFSSPG------F-----WRGK-----KYFSPGSEDYLKNQVFWEKVNNGWDEF---SIPKEVA 119 (237)
T ss_pred cCCCCeeEeeccCCeeEecccc------c-----ccCc-----cccCCChHHhhcCHHHHHHHhcCCccc---cchHHHH
Confidence 3677889999999999998621 0 0111 12356666555 4555443211 2368999
Q ss_pred HHHHHHHCCCCCeeeeEEEcccceeeCC---ceeecccccCCCCCcEEEEECCchhhcc-----CCCceeeeccccCCCC
Q 011855 373 AQLLDILDPDGKLISRRVYRESCIFSDG---TYTKDLTVLGVDLAKVAIIDNSPQVFRL-----QVNNGIPIESWFDDPS 444 (476)
Q Consensus 373 ~~ILd~LDP~~~lF~~RLyRe~C~~~~g---~yiKDLs~LGrdlskVVIIDDsp~s~~~-----q~~NgIpI~~f~gd~~ 444 (476)
.++++..-..|.-+-..--|... ..++ ..-|+..+ ..+.-|++.-|.+.-..+ -.+|++.| +|||.+
T Consensus 120 ~qLI~MHq~RGD~i~FvTGRt~g-k~d~vsk~Lak~F~i--~~m~pv~f~Gdk~k~~qy~Kt~~i~~~~~~I--hYGDSD 194 (237)
T COG3700 120 RQLIDMHQRRGDAIYFVTGRTPG-KTDTVSKTLAKNFHI--TNMNPVIFAGDKPKPGQYTKTQWIQDKNIRI--HYGDSD 194 (237)
T ss_pred HHHHHHHHhcCCeEEEEecCCCC-cccccchhHHhhccc--CCCcceeeccCCCCcccccccHHHHhcCceE--EecCCc
Confidence 99999987776322111113221 1111 12233332 344557788888833222 12455555 577775
Q ss_pred chH
Q 011855 445 DCS 447 (476)
Q Consensus 445 D~e 447 (476)
++-
T Consensus 195 ~Di 197 (237)
T COG3700 195 NDI 197 (237)
T ss_pred hhh
Confidence 553
No 227
>cd06536 CIDE_N_ICAD CIDE_N domain of ICAD. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD (DFF45). These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40 and ICAD/DFF45 during apoptosis. In normal cells, DFF exists in the nucleus as a heterodimer composed of CAD/DFF40 as a latent nuclease and its chaperone and inhibitor subunit ICAD/DFF45. Apoptotic activation of caspase-3 results in the cleavage of DFF45/ICAD and release of active DFF40/CAD nuclease.
Probab=20.57 E-value=1.5e+02 Score=25.14 Aligned_cols=16 Identities=44% Similarity=0.571 Sum_probs=13.8
Q ss_pred CceEEEEecCcccccc
Q 011855 302 KSVTLVLDLDETLVHS 317 (476)
Q Consensus 302 kk~tLVLDLDeTLVhS 317 (476)
...+|||+=|||.|..
T Consensus 41 ~~~~lvL~eDGT~Vdd 56 (80)
T cd06536 41 APITLVLAEDGTIVED 56 (80)
T ss_pred CceEEEEecCCcEEcc
Confidence 4579999999999966
Done!