Query 011856
Match_columns 476
No_of_seqs 414 out of 2701
Neff 9.5
Searched_HMMs 46136
Date Fri Mar 29 05:59:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011856.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011856hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0001 HemL Glutamate-1-semia 100.0 7.8E-90 1.7E-94 655.9 46.7 427 49-475 3-430 (432)
2 PLN02482 glutamate-1-semialdeh 100.0 4.3E-81 9.4E-86 629.1 50.2 473 1-474 1-474 (474)
3 COG4992 ArgD Ornithine/acetylo 100.0 5.2E-80 1.1E-84 582.6 40.2 370 78-474 21-399 (404)
4 COG0160 GabT 4-aminobutyrate a 100.0 5.4E-76 1.2E-80 572.7 42.9 410 48-474 13-446 (447)
5 PRK12389 glutamate-1-semialdeh 100.0 5.5E-74 1.2E-78 576.9 49.6 425 49-474 2-428 (428)
6 PRK00615 glutamate-1-semialdeh 100.0 3.4E-72 7.4E-77 560.5 48.1 421 50-474 4-429 (433)
7 PRK07046 aminotransferase; Val 100.0 2.6E-71 5.7E-76 557.9 49.0 420 48-475 25-452 (453)
8 TIGR00713 hemL glutamate-1-sem 100.0 3.2E-68 7E-73 538.0 49.0 423 52-474 1-423 (423)
9 KOG1404 Alanine-glyoxylate ami 100.0 5E-69 1.1E-73 496.0 37.9 408 47-467 5-432 (442)
10 PRK00062 glutamate-1-semialdeh 100.0 8.4E-68 1.8E-72 532.8 48.9 424 51-474 2-425 (426)
11 PRK07678 aminotransferase; Val 100.0 4.6E-68 9.9E-73 535.9 44.7 415 50-474 4-450 (451)
12 PRK07482 hypothetical protein; 100.0 8.3E-68 1.8E-72 534.9 45.6 421 51-474 3-455 (461)
13 PRK06062 hypothetical protein; 100.0 3E-67 6.4E-72 529.5 45.5 391 81-474 35-446 (451)
14 COG0161 BioA Adenosylmethionin 100.0 3.3E-68 7.2E-73 514.3 36.6 390 82-475 27-445 (449)
15 KOG1401 Acetylornithine aminot 100.0 6.5E-68 1.4E-72 492.6 37.0 412 52-475 9-432 (433)
16 PRK05965 hypothetical protein; 100.0 7.6E-67 1.7E-71 527.6 45.5 391 81-474 28-448 (459)
17 PRK11522 putrescine--2-oxoglut 100.0 4.2E-67 9E-72 527.7 43.2 374 80-474 62-452 (459)
18 PRK06058 4-aminobutyrate amino 100.0 9.2E-67 2E-71 526.9 45.5 402 49-474 15-443 (443)
19 PRK06938 diaminobutyrate--2-ox 100.0 6.9E-67 1.5E-71 527.4 44.5 385 81-475 45-462 (464)
20 PRK07481 hypothetical protein; 100.0 6.5E-67 1.4E-71 527.3 43.1 392 81-476 24-448 (449)
21 PRK06931 diaminobutyrate--2-ox 100.0 1E-66 2.2E-71 526.0 43.0 391 81-475 40-456 (459)
22 PRK05639 4-aminobutyrate amino 100.0 7.3E-66 1.6E-70 519.0 46.5 397 51-474 13-444 (457)
23 TIGR03372 putres_am_tran putre 100.0 2.1E-66 4.6E-71 518.8 42.1 368 82-471 58-442 (442)
24 PRK06916 adenosylmethionine--8 100.0 8.8E-66 1.9E-70 520.0 44.5 416 53-475 13-457 (460)
25 PRK06943 adenosylmethionine--8 100.0 1.2E-65 2.6E-70 517.5 44.2 384 81-474 36-447 (453)
26 PRK08742 adenosylmethionine--8 100.0 1.9E-65 4E-70 516.8 45.1 390 82-475 47-469 (472)
27 PRK07030 adenosylmethionine--8 100.0 1.7E-65 3.7E-70 517.5 43.9 387 82-474 30-447 (466)
28 PRK07483 hypothetical protein; 100.0 1.8E-65 4E-70 515.3 43.7 387 81-475 12-439 (443)
29 PRK08593 4-aminobutyrate amino 100.0 4.7E-65 1E-69 513.2 46.4 386 81-474 24-430 (445)
30 PRK05769 4-aminobutyrate amino 100.0 3.4E-65 7.4E-70 513.6 43.9 406 49-475 13-441 (441)
31 PLN02760 4-aminobutyrate:pyruv 100.0 6.4E-65 1.4E-69 516.3 42.9 390 81-474 71-492 (504)
32 TIGR00709 dat 2,4-diaminobutyr 100.0 5.5E-65 1.2E-69 513.3 41.2 391 81-475 21-437 (442)
33 PRK06541 hypothetical protein; 100.0 2.2E-64 4.9E-69 509.2 45.4 419 51-474 7-456 (460)
34 PRK07495 4-aminobutyrate amino 100.0 3.8E-64 8.3E-69 503.7 46.3 377 82-474 23-422 (425)
35 PRK06917 hypothetical protein; 100.0 1.8E-64 3.8E-69 508.7 43.6 392 81-475 14-439 (447)
36 PRK07480 putative aminotransfe 100.0 2.9E-64 6.4E-69 507.8 44.8 390 81-474 32-449 (456)
37 PRK07036 hypothetical protein; 100.0 3.3E-64 7.1E-69 508.8 45.1 390 81-474 33-453 (466)
38 PRK06777 4-aminobutyrate amino 100.0 6.5E-64 1.4E-68 502.9 46.7 394 53-472 3-420 (421)
39 PRK06082 4-aminobutyrate amino 100.0 6.6E-64 1.4E-68 505.7 46.3 383 82-475 55-453 (459)
40 KOG1402 Ornithine aminotransfe 100.0 2.3E-65 4.9E-70 460.6 30.5 392 50-472 20-426 (427)
41 PRK06105 aminotransferase; Pro 100.0 8.3E-64 1.8E-68 505.6 45.5 390 81-474 30-450 (460)
42 PRK06918 4-aminobutyrate amino 100.0 1.2E-63 2.6E-68 505.8 46.2 410 48-474 12-444 (451)
43 PRK12403 putative aminotransfe 100.0 1.3E-63 2.8E-68 504.3 45.6 391 81-474 36-453 (460)
44 PRK08360 4-aminobutyrate amino 100.0 1.4E-63 3E-68 501.7 45.2 406 53-474 3-427 (443)
45 PRK04612 argD acetylornithine 100.0 3.1E-63 6.8E-68 494.5 44.6 372 81-475 22-405 (408)
46 PRK08117 4-aminobutyrate amino 100.0 5.7E-63 1.2E-67 499.5 45.9 384 82-475 26-431 (433)
47 TIGR03246 arg_catab_astC succi 100.0 4.7E-63 1E-67 495.0 44.0 369 81-474 17-396 (397)
48 PRK06148 hypothetical protein; 100.0 4.4E-63 9.5E-68 540.1 46.4 386 81-475 606-1012(1013)
49 PRK07986 adenosylmethionine--8 100.0 9.3E-64 2E-68 499.6 37.7 378 82-474 26-424 (428)
50 PRK09792 4-aminobutyrate trans 100.0 9.2E-63 2E-67 494.5 45.0 375 82-472 23-420 (421)
51 PRK13360 omega amino acid--pyr 100.0 1.3E-62 2.8E-67 494.5 43.3 385 81-475 28-442 (442)
52 PRK06209 glutamate-1-semialdeh 100.0 2.3E-62 4.9E-67 492.7 43.3 399 53-474 1-406 (431)
53 TIGR00700 GABAtrnsam 4-aminobu 100.0 3.6E-62 7.7E-67 491.4 44.7 383 81-472 15-419 (420)
54 PRK06173 adenosylmethionine--8 100.0 2.7E-62 5.8E-67 489.9 41.4 370 83-475 28-427 (429)
55 TIGR00699 GABAtrns_euk 4-amino 100.0 6.3E-62 1.4E-66 486.8 42.6 394 47-471 16-464 (464)
56 PRK05964 adenosylmethionine--8 100.0 6E-62 1.3E-66 490.6 42.7 377 81-474 24-423 (423)
57 PRK09221 beta alanine--pyruvat 100.0 5.9E-62 1.3E-66 490.1 42.1 384 81-474 31-444 (445)
58 PRK04013 argD acetylornithine/ 100.0 4.9E-62 1.1E-66 476.6 39.5 352 82-475 7-362 (364)
59 TIGR02407 ectoine_ectB diamino 100.0 8.4E-62 1.8E-66 486.3 40.9 369 81-473 17-412 (412)
60 PRK05630 adenosylmethionine--8 100.0 6.3E-62 1.4E-66 486.7 39.3 375 81-473 22-420 (422)
61 PRK03715 argD acetylornithine 100.0 2.6E-61 5.7E-66 479.6 41.6 363 81-474 18-394 (395)
62 PRK12381 bifunctional succinyl 100.0 4.7E-61 1E-65 481.9 43.3 369 81-474 21-400 (406)
63 PLN00144 acetylornithine trans 100.0 2.7E-61 5.9E-66 478.3 40.9 362 85-474 1-381 (382)
64 PRK06149 hypothetical protein; 100.0 2.5E-61 5.5E-66 526.6 44.3 408 51-474 544-971 (972)
65 PRK09264 diaminobutyrate--2-ox 100.0 5.1E-61 1.1E-65 483.0 42.5 371 81-475 21-418 (425)
66 PLN02624 ornithine-delta-amino 100.0 3.1E-60 6.7E-65 481.9 46.2 393 51-473 37-444 (474)
67 PRK08297 L-lysine aminotransfe 100.0 1.1E-60 2.4E-65 480.7 39.6 375 83-474 28-442 (443)
68 PRK04073 rocD ornithine--oxo-a 100.0 1.1E-58 2.3E-63 464.3 43.1 379 52-471 3-395 (396)
69 PRK01278 argD acetylornithine 100.0 2.3E-58 4.9E-63 461.6 41.8 365 81-474 13-389 (389)
70 PRK05093 argD bifunctional N-s 100.0 1.5E-57 3.3E-62 456.9 44.0 370 81-475 22-402 (403)
71 TIGR03251 LAT_fam L-lysine 6-t 100.0 3.9E-58 8.5E-63 462.0 38.9 372 82-470 18-431 (431)
72 PF00202 Aminotran_3: Aminotra 100.0 4.9E-59 1.1E-63 454.4 30.7 316 84-409 1-338 (339)
73 TIGR00508 bioA adenosylmethion 100.0 8.5E-58 1.8E-62 458.6 38.7 377 82-473 28-426 (427)
74 PRK08088 4-aminobutyrate amino 100.0 3.1E-56 6.6E-61 449.4 45.7 401 53-474 4-424 (425)
75 PLN02974 adenosylmethionine-8- 100.0 2.8E-56 6E-61 469.6 45.2 412 49-471 310-816 (817)
76 PRK03244 argD acetylornithine 100.0 6E-56 1.3E-60 445.6 43.7 364 81-474 25-395 (398)
77 PRK02936 argD acetylornithine 100.0 9.6E-56 2.1E-60 441.1 41.4 362 81-471 11-377 (377)
78 cd00610 OAT_like Acetyl ornith 100.0 9.3E-55 2E-59 439.9 44.2 394 57-471 2-413 (413)
79 TIGR01885 Orn_aminotrans ornit 100.0 9.6E-55 2.1E-59 436.6 43.4 368 81-471 19-400 (401)
80 PRK00854 rocD ornithine--oxo-a 100.0 8.7E-54 1.9E-58 430.3 43.6 364 81-472 23-400 (401)
81 PRK02627 acetylornithine amino 100.0 8.5E-54 1.8E-58 430.3 42.9 366 81-475 21-396 (396)
82 KOG1403 Predicted alanine-glyo 100.0 4.3E-55 9.4E-60 389.3 27.2 401 54-473 8-437 (452)
83 PTZ00125 ornithine aminotransf 100.0 1.2E-52 2.5E-57 422.4 43.3 370 81-474 13-396 (400)
84 PRK04260 acetylornithine amino 100.0 1.3E-52 2.8E-57 417.8 41.0 360 81-471 11-375 (375)
85 TIGR00707 argD acetylornithine 100.0 2.8E-48 6E-53 388.1 40.2 362 80-471 8-379 (379)
86 KOG1405 4-aminobutyrate aminot 100.0 2.8E-44 6E-49 326.9 25.4 394 47-473 34-483 (484)
87 PLN02822 serine palmitoyltrans 100.0 5.2E-39 1.1E-43 326.8 36.7 377 52-475 65-479 (481)
88 PRK07505 hypothetical protein; 100.0 3.6E-37 7.9E-42 309.4 36.3 342 81-474 28-400 (402)
89 COG0156 BioF 7-keto-8-aminopel 100.0 2.2E-36 4.8E-41 292.6 34.4 332 87-470 28-387 (388)
90 PLN02955 8-amino-7-oxononanoat 100.0 4.8E-35 1E-39 289.6 33.1 327 97-473 100-461 (476)
91 TIGR01821 5aminolev_synth 5-am 100.0 5.8E-34 1.3E-38 286.5 36.4 329 96-474 42-397 (402)
92 PRK13393 5-aminolevulinate syn 100.0 5.8E-34 1.3E-38 286.6 35.1 327 97-474 43-397 (406)
93 PRK09064 5-aminolevulinate syn 100.0 4.4E-33 9.5E-38 280.7 35.8 327 98-474 45-398 (407)
94 PLN03227 serine palmitoyltrans 100.0 8.6E-33 1.9E-37 275.4 30.9 332 102-475 1-384 (392)
95 PRK05958 8-amino-7-oxononanoat 100.0 1.1E-31 2.4E-36 268.9 36.5 336 83-471 24-385 (385)
96 PRK07179 hypothetical protein; 100.0 1.4E-31 3.1E-36 269.5 35.0 333 79-474 42-399 (407)
97 TIGR01825 gly_Cac_T_rel pyrido 100.0 5.3E-31 1.2E-35 263.9 36.1 340 82-474 17-382 (385)
98 TIGR01822 2am3keto_CoA 2-amino 100.0 9.5E-31 2.1E-35 262.8 37.4 343 82-474 21-390 (393)
99 PRK06939 2-amino-3-ketobutyrat 100.0 1.6E-30 3.5E-35 261.6 37.7 342 82-474 25-394 (397)
100 KOG1359 Glycine C-acetyltransf 100.0 2E-31 4.3E-36 237.6 26.3 337 82-473 49-412 (417)
101 PRK13392 5-aminolevulinate syn 100.0 3E-30 6.4E-35 260.1 34.0 328 97-474 44-398 (410)
102 TIGR00858 bioF 8-amino-7-oxono 100.0 8.9E-29 1.9E-33 245.6 33.6 332 85-468 3-360 (360)
103 KOG1360 5-aminolevulinate synt 100.0 3.3E-29 7.2E-34 232.0 26.2 321 105-474 177-525 (570)
104 PLN02483 serine palmitoyltrans 100.0 2.1E-27 4.6E-32 242.4 37.8 329 96-474 97-467 (489)
105 COG0436 Aspartate/tyrosine/aro 100.0 4.6E-28 1E-32 239.9 31.9 335 99-474 28-392 (393)
106 PRK06225 aspartate aminotransf 100.0 7.2E-27 1.6E-31 233.3 32.2 337 98-474 27-377 (380)
107 PRK05937 8-amino-7-oxononanoat 100.0 1E-26 2.2E-31 231.0 32.2 318 98-474 3-351 (370)
108 PRK03317 histidinol-phosphate 100.0 2.9E-27 6.3E-32 235.1 27.9 321 100-473 27-364 (368)
109 PRK07682 hypothetical protein; 100.0 3.9E-26 8.5E-31 228.0 28.6 333 101-474 22-377 (378)
110 COG1168 MalY Bifunctional PLP- 100.0 1.6E-25 3.4E-30 208.9 30.0 348 86-474 10-387 (388)
111 PRK07324 transaminase; Validat 100.0 3.9E-26 8.4E-31 227.0 27.4 339 94-474 21-371 (373)
112 PLN00175 aminotransferase fami 100.0 2.5E-25 5.5E-30 223.8 32.8 331 100-472 55-412 (413)
113 PRK01533 histidinol-phosphate 100.0 2.9E-26 6.4E-31 226.9 25.3 322 97-473 27-355 (366)
114 PRK06207 aspartate aminotransf 100.0 3.7E-25 8E-30 222.3 33.5 339 99-474 39-403 (405)
115 PRK07681 aspartate aminotransf 99.9 1E-25 2.2E-30 226.4 29.1 330 98-469 31-384 (399)
116 PRK15481 transcriptional regul 99.9 1.3E-25 2.7E-30 227.9 29.6 324 100-472 86-430 (431)
117 COG0079 HisC Histidinol-phosph 99.9 1.4E-25 3.1E-30 218.3 28.4 316 100-473 23-354 (356)
118 PRK03158 histidinol-phosphate 99.9 7.6E-26 1.6E-30 224.3 26.9 318 100-470 30-358 (359)
119 PRK08153 histidinol-phosphate 99.9 1.5E-25 3.3E-30 222.5 29.0 324 100-474 33-366 (369)
120 cd06454 KBL_like KBL_like; thi 99.9 2.6E-25 5.7E-30 219.8 30.3 320 99-470 1-348 (349)
121 PRK07366 succinyldiaminopimela 99.9 3.4E-25 7.4E-30 221.9 30.8 334 97-470 28-387 (388)
122 PRK08960 hypothetical protein; 99.9 4.6E-25 9.9E-30 220.8 31.2 330 99-472 32-386 (387)
123 PRK06108 aspartate aminotransf 99.9 4.3E-25 9.2E-30 221.0 30.2 332 100-472 25-381 (382)
124 PRK06290 aspartate aminotransf 99.9 6.5E-25 1.4E-29 220.3 31.1 345 97-476 42-408 (410)
125 PRK02731 histidinol-phosphate 99.9 3.7E-25 8.1E-30 220.1 29.0 324 97-473 30-366 (367)
126 TIGR03576 pyridox_MJ0158 pyrid 99.9 4.4E-25 9.5E-30 215.8 28.0 301 111-471 28-345 (346)
127 PRK09148 aminotransferase; Val 99.9 1.5E-24 3.3E-29 218.0 31.9 338 97-473 28-390 (405)
128 PRK09147 succinyldiaminopimela 99.9 1.9E-24 4E-29 217.1 31.5 331 97-472 27-395 (396)
129 PRK07309 aromatic amino acid a 99.9 1.2E-24 2.5E-29 218.0 29.4 336 99-474 30-389 (391)
130 TIGR03537 DapC succinyldiamino 99.9 2.5E-24 5.5E-29 212.5 30.9 322 101-469 2-349 (350)
131 PRK14809 histidinol-phosphate 99.9 8.8E-25 1.9E-29 216.4 27.6 321 97-472 28-356 (357)
132 PRK08636 aspartate aminotransf 99.9 4.9E-24 1.1E-28 214.4 33.4 343 97-473 31-400 (403)
133 PRK06348 aspartate aminotransf 99.9 3E-24 6.5E-29 214.6 31.4 331 100-470 30-382 (384)
134 PRK08068 transaminase; Reviewe 99.9 2.9E-24 6.3E-29 215.2 30.9 329 99-469 32-385 (389)
135 PRK08175 aminotransferase; Val 99.9 3.7E-24 7.9E-29 214.8 31.5 337 98-474 28-390 (395)
136 PRK09082 methionine aminotrans 99.9 1.5E-24 3.4E-29 216.8 28.7 330 99-469 30-385 (386)
137 PLN02187 rooty/superroot1 99.9 5.9E-24 1.3E-28 216.1 32.7 343 97-474 64-439 (462)
138 PRK09276 LL-diaminopimelate am 99.9 4.3E-24 9.3E-29 213.8 31.2 330 98-469 30-384 (385)
139 PRK00950 histidinol-phosphate 99.9 1.5E-24 3.3E-29 215.3 27.6 320 96-471 31-360 (361)
140 PRK05764 aspartate aminotransf 99.9 3.8E-24 8.2E-29 214.9 30.5 340 99-474 31-392 (393)
141 PRK08361 aspartate aminotransf 99.9 3E-24 6.4E-29 215.2 29.5 337 100-473 34-390 (391)
142 PRK02610 histidinol-phosphate 99.9 2.8E-24 6.1E-29 213.9 29.0 328 99-474 28-372 (374)
143 TIGR03540 DapC_direct LL-diami 99.9 4.8E-24 1E-28 213.3 30.8 330 98-469 28-382 (383)
144 PRK12414 putative aminotransfe 99.9 7.2E-24 1.6E-28 211.8 31.6 329 100-469 30-383 (384)
145 PRK08363 alanine aminotransfer 99.9 5.7E-24 1.2E-28 213.7 30.3 342 98-474 29-395 (398)
146 PRK08056 threonine-phosphate d 99.9 3.7E-24 8.1E-29 211.7 28.4 324 96-472 17-354 (356)
147 PLN00143 tyrosine/nicotianamin 99.9 4.6E-24 1E-28 214.6 29.4 341 96-474 29-405 (409)
148 PRK05942 aspartate aminotransf 99.9 8.5E-24 1.8E-28 212.1 31.2 331 98-470 34-389 (394)
149 PRK13355 bifunctional HTH-doma 99.9 3E-24 6.6E-29 222.0 28.6 341 96-474 143-515 (517)
150 PRK05839 hypothetical protein; 99.9 4.6E-24 9.9E-29 212.3 28.6 326 97-472 22-373 (374)
151 TIGR01264 tyr_amTase_E tyrosin 99.9 9E-24 1.9E-28 212.5 30.9 341 98-474 30-400 (401)
152 PRK06855 aminotransferase; Val 99.9 6.7E-24 1.5E-28 214.8 29.9 333 116-474 49-430 (433)
153 PRK05957 aspartate aminotransf 99.9 1.1E-23 2.4E-28 210.8 31.1 332 101-475 29-387 (389)
154 PRK07683 aminotransferase A; V 99.9 1.5E-23 3.3E-28 209.6 31.8 334 99-474 28-384 (387)
155 PRK14807 histidinol-phosphate 99.9 1.6E-23 3.5E-28 206.8 31.4 317 101-471 24-350 (351)
156 PLN02656 tyrosine transaminase 99.9 4.1E-23 8.9E-28 207.9 34.2 340 97-473 29-403 (409)
157 PRK06358 threonine-phosphate d 99.9 1.4E-23 3E-28 207.3 30.2 319 99-471 19-353 (354)
158 PRK08912 hypothetical protein; 99.9 1.9E-23 4.1E-28 209.2 31.4 333 100-473 27-386 (387)
159 TIGR03538 DapC_gpp succinyldia 99.9 1.6E-23 3.4E-28 210.2 30.8 330 96-470 25-392 (393)
160 PRK06107 aspartate aminotransf 99.9 2E-23 4.4E-28 209.8 31.5 343 99-474 33-401 (402)
161 PLN03026 histidinol-phosphate 99.9 9.7E-24 2.1E-28 210.2 28.9 319 97-470 50-379 (380)
162 TIGR01141 hisC histidinol-phos 99.9 1E-23 2.2E-28 208.1 28.5 314 99-468 19-346 (346)
163 PLN00145 tyrosine/nicotianamin 99.9 2.9E-23 6.2E-28 209.7 31.8 341 98-474 51-425 (430)
164 PTZ00433 tyrosine aminotransfe 99.9 3.2E-23 7E-28 208.9 31.9 346 93-474 27-409 (412)
165 PRK09105 putative aminotransfe 99.9 1.3E-23 2.7E-28 208.5 28.0 317 99-471 43-368 (370)
166 PRK05664 threonine-phosphate d 99.9 4.9E-24 1.1E-28 208.5 24.7 302 99-473 20-328 (330)
167 PRK07777 aminotransferase; Val 99.9 3.7E-23 8E-28 207.1 30.7 334 100-472 25-385 (387)
168 PRK06959 putative threonine-ph 99.9 1.1E-23 2.4E-28 206.4 26.3 302 99-474 24-334 (339)
169 PRK07550 hypothetical protein; 99.9 2.6E-23 5.7E-28 208.1 29.5 331 98-470 28-384 (386)
170 PRK03321 putative aminotransfe 99.9 5.5E-24 1.2E-28 210.4 24.2 318 100-472 23-350 (352)
171 PRK05387 histidinol-phosphate 99.9 2.4E-23 5.1E-28 206.1 28.2 318 98-472 23-352 (353)
172 KOG0257 Kynurenine aminotransf 99.9 2.8E-24 6E-29 202.6 20.2 330 116-469 45-415 (420)
173 PRK06425 histidinol-phosphate 99.9 7.1E-24 1.5E-28 207.6 24.2 302 100-471 17-331 (332)
174 COG1167 ARO8 Transcriptional r 99.9 5.8E-23 1.3E-27 208.1 31.2 338 96-474 86-456 (459)
175 PRK04870 histidinol-phosphate 99.9 1.7E-23 3.7E-28 207.2 26.5 320 98-470 25-355 (356)
176 PRK09257 aromatic amino acid a 99.9 1.3E-23 2.8E-28 210.9 25.0 332 100-471 27-396 (396)
177 PRK07392 threonine-phosphate d 99.9 7E-23 1.5E-27 203.0 29.7 322 99-472 22-358 (360)
178 PRK14808 histidinol-phosphate 99.9 1.6E-23 3.4E-28 205.1 24.5 319 87-470 7-334 (335)
179 PRK07865 N-succinyldiaminopime 99.9 6.3E-23 1.4E-27 203.7 28.9 314 99-468 27-363 (364)
180 PTZ00377 alanine aminotransfer 99.9 9.9E-23 2.1E-27 209.1 30.9 332 117-474 90-476 (481)
181 PLN02672 methionine S-methyltr 99.9 1.1E-22 2.4E-27 218.3 32.3 352 93-473 691-1080(1082)
182 TIGR01140 L_thr_O3P_dcar L-thr 99.9 2.8E-23 6.1E-28 203.2 25.4 302 99-468 17-330 (330)
183 PF00155 Aminotran_1_2: Aminot 99.9 2E-23 4.3E-28 207.5 24.3 327 100-467 2-363 (363)
184 PRK07568 aspartate aminotransf 99.9 2.1E-22 4.4E-27 202.6 31.9 332 100-474 31-393 (397)
185 PRK03967 histidinol-phosphate 99.9 3.6E-23 7.9E-28 202.9 25.6 310 97-473 16-334 (337)
186 TIGR03539 DapC_actino succinyl 99.9 1.1E-22 2.4E-27 201.3 28.4 314 98-467 20-356 (357)
187 PRK09265 aminotransferase AlaT 99.9 1.5E-22 3.2E-27 203.8 29.8 342 97-474 31-402 (404)
188 PTZ00376 aspartate aminotransf 99.9 3.9E-23 8.5E-28 207.8 25.4 298 138-473 75-403 (404)
189 TIGR01265 tyr_nico_aTase tyros 99.9 1.5E-22 3.2E-27 203.7 29.3 344 97-474 29-402 (403)
190 PRK07337 aminotransferase; Val 99.9 1.5E-22 3.2E-27 202.8 29.0 333 100-471 31-387 (388)
191 PRK05166 histidinol-phosphate 99.9 1.1E-22 2.3E-27 202.5 27.5 322 98-472 35-370 (371)
192 PRK07590 L,L-diaminopimelate a 99.9 1.4E-22 3.1E-27 204.2 27.7 337 98-470 33-408 (409)
193 PLN02450 1-aminocyclopropane-1 99.9 2.9E-22 6.4E-27 204.1 30.1 306 138-474 89-431 (468)
194 PRK09440 avtA valine--pyruvate 99.9 1.5E-22 3.2E-27 204.8 27.7 336 101-475 32-413 (416)
195 PRK01688 histidinol-phosphate 99.9 1.9E-23 4.1E-28 206.1 19.5 306 101-468 30-351 (351)
196 PRK08354 putative aminotransfe 99.9 7.3E-22 1.6E-26 191.6 29.7 298 97-470 6-309 (311)
197 TIGR02539 SepCysS Sep-tRNA:Cys 99.9 3.7E-22 8E-27 198.4 28.0 296 140-473 52-368 (370)
198 PRK06836 aspartate aminotransf 99.9 1E-21 2.2E-26 197.0 30.8 330 99-474 33-392 (394)
199 PLN02721 threonine aldolase 99.9 5.4E-22 1.2E-26 196.4 28.5 333 100-473 6-352 (353)
200 cd00613 GDC-P Glycine cleavage 99.9 4E-22 8.7E-27 200.6 27.3 319 107-467 24-398 (398)
201 PLN02376 1-aminocyclopropane-1 99.9 1E-21 2.3E-26 200.7 30.5 303 138-473 97-438 (496)
202 PRK07908 hypothetical protein; 99.9 1.2E-21 2.7E-26 193.3 29.2 313 98-473 21-347 (349)
203 PLN02607 1-aminocyclopropane-1 99.9 1.9E-21 4.1E-26 196.7 31.0 339 100-473 48-437 (447)
204 TIGR03542 DAPAT_plant LL-diami 99.9 4.8E-22 1E-26 199.9 26.4 335 98-470 32-401 (402)
205 cd06502 TA_like Low-specificit 99.9 4.4E-22 9.5E-27 195.8 25.0 319 103-469 1-337 (338)
206 cd00609 AAT_like Aspartate ami 99.9 8.7E-22 1.9E-26 194.4 25.6 295 137-469 38-350 (350)
207 PRK04781 histidinol-phosphate 99.9 7.7E-22 1.7E-26 195.5 24.1 286 141-472 61-362 (364)
208 PRK10534 L-threonine aldolase; 99.9 1.4E-21 3E-26 191.8 24.1 320 101-472 1-332 (333)
209 PLN02231 alanine transaminase 99.9 3.6E-21 7.8E-26 197.9 27.9 332 117-474 142-528 (534)
210 PLN02397 aspartate transaminas 99.9 6.2E-21 1.3E-25 192.5 28.3 297 138-472 94-420 (423)
211 KOG1358 Serine palmitoyltransf 99.9 2.5E-21 5.4E-26 179.9 23.0 379 53-474 50-466 (467)
212 PRK13520 L-tyrosine decarboxyl 99.9 2E-20 4.4E-25 186.5 29.4 313 114-472 30-370 (371)
213 PRK09331 Sep-tRNA:Cys-tRNA syn 99.9 1.5E-20 3.3E-25 187.8 28.1 332 111-474 27-382 (387)
214 TIGR03392 FeS_syn_CsdA cystein 99.9 9.5E-20 2.1E-24 183.2 34.0 328 98-474 16-396 (398)
215 PRK04635 histidinol-phosphate 99.9 6.2E-21 1.3E-25 188.6 25.0 309 99-470 31-352 (354)
216 KOG1357 Serine palmitoyltransf 99.9 1.6E-21 3.5E-26 184.3 18.6 321 101-471 138-500 (519)
217 KOG0259 Tyrosine aminotransfer 99.9 7.5E-20 1.6E-24 169.7 28.3 321 116-473 79-433 (447)
218 PRK09275 aspartate aminotransf 99.9 3.1E-21 6.7E-26 195.8 20.9 337 112-474 109-518 (527)
219 PRK10874 cysteine sulfinate de 99.9 8.3E-20 1.8E-24 183.8 31.1 328 98-475 19-400 (401)
220 PRK08637 hypothetical protein; 99.9 3.6E-20 7.7E-25 185.4 27.6 303 138-474 47-387 (388)
221 TIGR03301 PhnW-AepZ 2-aminoeth 99.9 1.7E-19 3.6E-24 178.8 30.8 318 116-470 10-354 (355)
222 PRK13238 tnaA tryptophanase/L- 99.9 1.8E-19 3.9E-24 182.2 30.4 333 119-472 58-432 (460)
223 TIGR03801 asp_4_decarbox aspar 99.9 9.4E-21 2E-25 192.0 20.6 343 112-474 103-517 (521)
224 cd06451 AGAT_like Alanine-glyo 99.9 2.1E-19 4.5E-24 178.1 27.4 312 116-471 10-355 (356)
225 PLN02368 alanine transaminase 99.9 3.8E-20 8.3E-25 184.7 21.0 230 138-387 110-377 (407)
226 PRK02948 cysteine desulfurase; 99.9 5.6E-19 1.2E-23 176.6 28.9 315 114-474 10-375 (381)
227 TIGR03402 FeS_nifS cysteine de 99.9 6.2E-19 1.3E-23 176.2 28.6 314 114-474 9-373 (379)
228 TIGR01976 am_tr_V_VC1184 cyste 99.8 3.6E-18 7.9E-23 171.8 33.5 319 99-467 18-397 (397)
229 cd06453 SufS_like Cysteine des 99.8 3E-18 6.5E-23 170.9 32.1 314 113-467 8-373 (373)
230 COG1104 NifS Cysteine sulfinat 99.8 9.3E-19 2E-23 167.1 26.0 324 100-474 3-378 (386)
231 TIGR01979 sufS cysteine desulf 99.8 2.8E-18 6E-23 173.0 31.2 325 100-474 20-402 (403)
232 TIGR03812 tyr_de_CO2_Arch tyro 99.8 2.6E-18 5.6E-23 171.4 30.1 312 116-469 32-372 (373)
233 cd06452 SepCysS Sep-tRNA:Cys-t 99.8 8.1E-19 1.8E-23 174.1 26.2 327 113-471 10-360 (361)
234 TIGR02326 transamin_PhnW 2-ami 99.8 3.5E-18 7.5E-23 169.8 29.8 297 139-472 35-361 (363)
235 COG2008 GLY1 Threonine aldolas 99.8 1.5E-18 3.2E-23 162.2 24.4 323 102-471 2-341 (342)
236 PRK09295 bifunctional cysteine 99.8 2E-17 4.2E-22 166.8 34.1 326 98-472 23-403 (406)
237 PRK13479 2-aminoethylphosphona 99.8 1.2E-17 2.7E-22 166.2 30.7 319 116-474 16-364 (368)
238 TIGR01437 selA_rel uncharacter 99.8 1.9E-17 4.2E-22 163.6 31.7 322 100-471 9-363 (363)
239 TIGR01814 kynureninase kynuren 99.8 1.8E-17 3.8E-22 167.0 29.8 321 113-471 36-405 (406)
240 COG0520 csdA Selenocysteine ly 99.8 3.7E-17 8E-22 162.0 31.4 325 100-472 24-404 (405)
241 PLN02409 serine--glyoxylate am 99.8 9.7E-18 2.1E-22 168.3 27.0 318 117-474 21-373 (401)
242 PLN02855 Bifunctional selenocy 99.8 2.5E-17 5.4E-22 166.9 30.2 327 99-473 33-418 (424)
243 cd00617 Tnase_like Tryptophana 99.8 1.2E-17 2.6E-22 166.6 26.2 351 96-473 17-408 (431)
244 cd00378 SHMT Serine-glycine hy 99.8 4.9E-17 1.1E-21 163.9 30.1 326 99-473 19-385 (402)
245 cd00614 CGS_like CGS_like: Cys 99.8 3E-18 6.4E-23 170.1 20.5 238 136-409 37-293 (369)
246 KOG1368 Threonine aldolase [Am 99.8 6.4E-18 1.4E-22 152.0 20.3 327 101-470 23-365 (384)
247 PRK00011 glyA serine hydroxyme 99.8 5E-17 1.1E-21 164.4 29.5 325 99-473 25-389 (416)
248 KOG0256 1-aminocyclopropane-1- 99.8 3.9E-17 8.6E-22 153.1 25.7 306 137-473 123-461 (471)
249 PRK13034 serine hydroxymethylt 99.8 9E-17 2E-21 161.5 29.7 308 117-473 41-392 (416)
250 TIGR02006 IscS cysteine desulf 99.8 7.7E-17 1.7E-21 162.1 29.0 255 99-386 4-281 (402)
251 PLN02242 methionine gamma-lyas 99.8 9.7E-18 2.1E-22 167.9 21.1 241 137-409 74-334 (418)
252 cd06450 DOPA_deC_like DOPA dec 99.8 5.7E-17 1.2E-21 160.0 24.3 280 138-469 37-344 (345)
253 TIGR03403 nifS_epsilon cystein 99.8 6.8E-16 1.5E-20 154.4 31.1 322 101-474 2-376 (382)
254 PRK06767 methionine gamma-lyas 99.8 6.8E-17 1.5E-21 161.0 22.5 285 136-473 58-385 (386)
255 PLN02651 cysteine desulfurase 99.8 1.9E-16 4.2E-21 157.2 24.6 247 114-386 9-277 (364)
256 TIGR02379 ECA_wecE TDP-4-keto- 99.8 3E-16 6.5E-21 155.5 25.9 310 117-471 10-375 (376)
257 TIGR01977 am_tr_V_EF2568 cyste 99.8 6.6E-16 1.4E-20 154.2 28.5 311 116-469 12-375 (376)
258 PRK14012 cysteine desulfurase; 99.8 5.7E-16 1.2E-20 156.0 27.4 254 99-386 4-283 (404)
259 cd00616 AHBA_syn 3-amino-5-hyd 99.7 3.4E-16 7.4E-21 154.9 24.7 299 122-468 3-352 (352)
260 PRK13580 serine hydroxymethylt 99.7 2.5E-15 5.3E-20 149.8 30.1 214 232-473 208-445 (493)
261 PF00266 Aminotran_5: Aminotra 99.7 5.8E-16 1.3E-20 154.3 25.3 310 114-463 9-371 (371)
262 TIGR01325 O_suc_HS_sulf O-succ 99.7 1.7E-16 3.7E-21 157.8 21.0 238 136-409 51-306 (380)
263 PRK06234 methionine gamma-lyas 99.7 5.2E-16 1.1E-20 155.3 24.4 291 136-474 61-398 (400)
264 PRK08249 cystathionine gamma-s 99.7 6.7E-16 1.5E-20 154.0 24.2 238 136-409 61-316 (398)
265 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.7 1.7E-15 3.6E-20 150.8 26.8 308 118-471 11-374 (375)
266 PRK06460 hypothetical protein; 99.7 6.9E-16 1.5E-20 153.1 23.8 234 137-409 43-297 (376)
267 PRK07049 methionine gamma-lyas 99.7 1.1E-15 2.3E-20 153.8 25.3 237 136-409 80-349 (427)
268 TIGR02080 O_succ_thio_ly O-suc 99.7 7.6E-16 1.6E-20 152.9 23.9 237 136-409 48-304 (382)
269 PRK08045 cystathionine gamma-s 99.7 1.1E-15 2.3E-20 151.9 24.3 237 136-409 49-305 (386)
270 PRK07810 O-succinylhomoserine 99.7 5.4E-16 1.2E-20 154.9 21.6 234 136-410 67-324 (403)
271 KOG0634 Aromatic amino acid am 99.7 3.1E-15 6.7E-20 141.7 25.3 292 157-474 126-467 (472)
272 PRK07504 O-succinylhomoserine 99.7 8.4E-16 1.8E-20 153.5 22.5 238 136-409 62-318 (398)
273 KOG0633 Histidinol phosphate a 99.7 6.2E-16 1.3E-20 136.7 18.6 286 137-470 67-374 (375)
274 TIGR01328 met_gam_lyase methio 99.7 1.1E-15 2.4E-20 152.2 22.7 240 136-409 56-313 (391)
275 COG3977 Alanine-alpha-ketoisov 99.7 4.8E-15 1E-19 133.7 24.3 307 138-475 77-413 (417)
276 PRK08247 cystathionine gamma-s 99.7 1.3E-15 2.9E-20 150.7 23.1 232 136-409 49-288 (366)
277 PRK08133 O-succinylhomoserine 99.7 2.4E-15 5.3E-20 149.9 24.0 237 137-409 59-313 (390)
278 TIGR03235 DNA_S_dndA cysteine 99.7 2.1E-15 4.6E-20 149.2 23.3 246 113-386 7-279 (353)
279 PLN03226 serine hydroxymethylt 99.7 2.1E-14 4.5E-19 145.8 29.4 315 116-472 46-418 (475)
280 PRK07050 cystathionine beta-ly 99.7 7.2E-15 1.6E-19 146.5 25.5 288 136-475 62-393 (394)
281 TIGR01324 cysta_beta_ly_B cyst 99.7 4.2E-15 9.1E-20 147.1 23.5 286 138-473 49-376 (377)
282 COG0399 WecE Predicted pyridox 99.7 1.8E-14 3.8E-19 139.3 26.5 307 118-473 15-373 (374)
283 PRK08776 cystathionine gamma-s 99.7 9.7E-15 2.1E-19 145.9 25.4 236 136-409 57-313 (405)
284 COG0075 Serine-pyruvate aminot 99.7 2.9E-14 6.2E-19 137.6 27.0 319 117-474 17-364 (383)
285 PRK07503 methionine gamma-lyas 99.7 1E-14 2.2E-19 146.0 24.4 217 136-386 62-282 (403)
286 PRK00451 glycine dehydrogenase 99.7 3E-14 6.5E-19 145.5 27.8 279 143-471 116-446 (447)
287 PRK08861 cystathionine gamma-s 99.7 9.5E-15 2E-19 144.7 23.2 237 136-409 50-306 (388)
288 PRK05968 hypothetical protein; 99.7 1.3E-14 2.8E-19 144.7 24.1 249 136-441 60-329 (389)
289 PRK07582 cystathionine gamma-l 99.7 1.1E-14 2.4E-19 144.0 23.3 232 136-409 48-300 (366)
290 PLN03032 serine decarboxylase; 99.7 4.7E-14 1E-18 138.4 27.3 284 138-469 65-372 (374)
291 PRK09028 cystathionine beta-ly 99.7 8.8E-15 1.9E-19 144.8 22.2 235 138-409 60-313 (394)
292 PTZ00094 serine hydroxymethylt 99.7 4.1E-14 8.8E-19 144.1 27.6 317 116-473 46-408 (452)
293 PRK06084 O-acetylhomoserine am 99.7 1.1E-14 2.3E-19 146.4 23.0 239 137-409 56-345 (425)
294 PRK08574 cystathionine gamma-s 99.7 1.3E-14 2.8E-19 144.3 22.7 212 137-386 51-268 (385)
295 PRK07811 cystathionine gamma-s 99.7 1.7E-14 3.8E-19 143.7 23.5 238 136-409 58-314 (388)
296 PRK07269 cystathionine gamma-s 99.7 8.4E-15 1.8E-19 144.3 21.0 230 136-409 51-288 (364)
297 TIGR01326 OAH_OAS_sulfhy OAH/O 99.7 2.2E-14 4.8E-19 144.4 24.4 163 136-329 54-219 (418)
298 PRK02769 histidine decarboxyla 99.7 1.4E-13 3.1E-18 136.0 29.7 289 138-472 64-371 (380)
299 PRK11658 UDP-4-amino-4-deoxy-L 99.7 7.6E-14 1.6E-18 139.0 26.9 310 118-472 14-378 (379)
300 PRK15407 lipopolysaccharide bi 99.6 8.6E-14 1.9E-18 140.4 26.9 305 121-472 47-435 (438)
301 TIGR03531 selenium_SpcS O-phos 99.6 1.2E-13 2.6E-18 137.7 25.3 298 138-471 104-444 (444)
302 PF01041 DegT_DnrJ_EryC1: DegT 99.6 6.1E-14 1.3E-18 139.0 23.2 304 118-468 5-363 (363)
303 PRK05994 O-acetylhomoserine am 99.6 3E-14 6.5E-19 143.5 21.3 238 137-409 61-349 (427)
304 PLN02509 cystathionine beta-ly 99.6 6.1E-14 1.3E-18 141.3 23.3 230 138-408 132-384 (464)
305 TIGR01329 cysta_beta_ly_E cyst 99.6 7.3E-14 1.6E-18 138.7 23.5 280 138-473 46-375 (378)
306 cd00615 Orn_deC_like Ornithine 99.6 1.8E-15 4E-20 145.5 11.4 228 136-385 56-293 (294)
307 PRK04366 glycine dehydrogenase 99.6 3.4E-13 7.4E-18 138.1 28.5 320 115-474 81-449 (481)
308 PRK08248 O-acetylhomoserine am 99.6 2.3E-13 5.1E-18 136.8 24.8 159 137-327 62-224 (431)
309 PRK05967 cystathionine beta-ly 99.6 1.8E-13 3.9E-18 135.3 23.4 237 137-409 62-316 (395)
310 KOG1549 Cysteine desulfurase N 99.6 3.1E-13 6.6E-18 130.0 23.9 197 100-329 45-257 (428)
311 TIGR01788 Glu-decarb-GAD gluta 99.6 5.8E-13 1.3E-17 133.5 27.2 326 116-474 53-430 (431)
312 PRK04311 selenocysteine syntha 99.6 8E-13 1.7E-17 133.3 28.1 316 116-472 98-463 (464)
313 TIGR03588 PseC UDP-4-keto-6-de 99.6 7.4E-13 1.6E-17 132.3 27.7 310 118-471 10-380 (380)
314 PRK06702 O-acetylhomoserine am 99.6 1.7E-13 3.7E-18 136.8 22.1 256 116-409 37-347 (432)
315 PRK08064 cystathionine beta-ly 99.6 3.4E-13 7.3E-18 134.6 22.5 235 138-409 53-306 (390)
316 PLN02414 glycine dehydrogenase 99.6 1.2E-12 2.7E-17 141.2 27.9 304 139-474 568-908 (993)
317 PRK07671 cystathionine beta-ly 99.6 5E-13 1.1E-17 132.6 23.1 236 136-408 47-301 (377)
318 PRK06176 cystathionine gamma-s 99.6 2.9E-13 6.3E-18 134.4 20.5 168 137-336 48-220 (380)
319 PRK05939 hypothetical protein; 99.6 1E-12 2.3E-17 131.0 24.2 159 137-328 45-207 (397)
320 PRK08114 cystathionine beta-ly 99.6 9.8E-13 2.1E-17 129.9 22.9 237 137-409 60-316 (395)
321 TIGR00474 selA seryl-tRNA(sec) 99.5 4E-12 8.7E-17 127.9 27.1 310 116-467 93-453 (454)
322 PF01053 Cys_Met_Meta_PP: Cys/ 99.5 4.3E-13 9.3E-18 132.2 19.6 233 137-410 53-311 (386)
323 PRK07812 O-acetylhomoserine am 99.5 1.1E-12 2.3E-17 131.9 22.7 157 138-327 68-230 (436)
324 PRK03080 phosphoserine aminotr 99.5 2E-12 4.2E-17 128.9 23.5 309 117-474 24-374 (378)
325 TIGR02618 tyr_phenol_ly tyrosi 99.5 3.5E-12 7.7E-17 125.6 23.9 343 98-473 37-426 (450)
326 PRK08134 O-acetylhomoserine am 99.5 2.6E-12 5.6E-17 129.3 23.5 159 137-327 62-224 (433)
327 cd01494 AAT_I Aspartate aminot 99.5 3.8E-13 8.2E-18 118.1 15.2 164 142-328 3-170 (170)
328 PLN02263 serine decarboxylase 99.5 5.3E-11 1.1E-15 118.7 31.4 290 137-472 131-442 (470)
329 PRK05367 glycine dehydrogenase 99.5 8E-12 1.7E-16 135.6 26.6 301 139-474 542-876 (954)
330 PLN02880 tyrosine decarboxylas 99.5 8.9E-12 1.9E-16 127.3 24.8 314 137-474 120-485 (490)
331 TIGR00461 gcvP glycine dehydro 99.5 2.7E-11 5.9E-16 129.3 28.7 300 139-474 530-868 (939)
332 PLN02590 probable tyrosine dec 99.5 4.9E-11 1.1E-15 122.0 28.2 314 137-474 168-533 (539)
333 KOG2862 Alanine-glyoxylate ami 99.5 4.7E-11 1E-15 108.8 24.4 310 111-473 39-382 (385)
334 PRK13237 tyrosine phenol-lyase 99.5 6.9E-11 1.5E-15 116.9 27.5 346 98-473 44-433 (460)
335 TIGR03799 NOD_PanD_pyr putativ 99.5 5E-11 1.1E-15 122.1 27.6 231 137-387 127-419 (522)
336 PRK05355 3-phosphoserine/phosp 99.5 1.5E-11 3.2E-16 121.4 23.0 307 116-472 14-357 (360)
337 PRK12566 glycine dehydrogenase 99.4 3.7E-11 8E-16 127.5 26.6 300 139-474 543-877 (954)
338 COG1103 Archaea-specific pyrid 99.4 4.8E-11 1E-15 106.6 22.8 299 143-473 65-380 (382)
339 TIGR01364 serC_1 phosphoserine 99.4 7.4E-11 1.6E-15 115.8 24.7 310 116-472 3-347 (349)
340 COG1448 TyrB Aspartate/tyrosin 99.4 2.6E-11 5.6E-16 114.3 20.2 275 159-470 98-395 (396)
341 PLN02724 Molybdenum cofactor s 99.4 3.9E-10 8.4E-15 122.5 31.8 344 99-471 35-486 (805)
342 PRK05613 O-acetylhomoserine am 99.4 4.5E-11 9.8E-16 120.3 22.4 157 137-327 67-230 (437)
343 COG0626 MetC Cystathionine bet 99.4 4E-11 8.8E-16 116.8 20.5 235 138-410 62-319 (396)
344 PF01212 Beta_elim_lyase: Beta 99.4 3.8E-13 8.2E-18 127.6 6.0 194 116-334 7-214 (290)
345 TIGR01366 serC_3 phosphoserine 99.4 3.5E-11 7.6E-16 118.9 19.6 305 117-474 15-361 (361)
346 cd00611 PSAT_like Phosphoserin 99.4 8.2E-11 1.8E-15 116.2 22.2 309 116-470 10-353 (355)
347 COG3844 Kynureninase [Amino ac 99.4 7E-10 1.5E-14 102.0 25.1 330 95-474 28-403 (407)
348 COG2873 MET17 O-acetylhomoseri 99.4 1.6E-10 3.4E-15 108.3 21.2 166 137-333 60-228 (426)
349 PRK15029 arginine decarboxylas 99.3 7.4E-11 1.6E-15 124.2 20.5 232 139-388 205-465 (755)
350 PRK06434 cystathionine gamma-l 99.3 1.3E-10 2.9E-15 114.9 21.0 230 137-409 62-308 (384)
351 COG0076 GadB Glutamate decarbo 99.3 6.9E-10 1.5E-14 111.7 21.6 251 116-387 74-361 (460)
352 TIGR02617 tnaA_trp_ase tryptop 99.2 8.3E-09 1.8E-13 101.1 26.5 344 99-473 41-441 (467)
353 KOG0053 Cystathionine beta-lya 99.2 2.2E-10 4.8E-15 110.3 15.3 190 139-362 77-271 (409)
354 PLN02271 serine hydroxymethylt 99.2 5.7E-09 1.2E-13 105.2 25.6 269 162-472 221-539 (586)
355 PF01276 OKR_DC_1: Orn/Lys/Arg 99.2 1.7E-11 3.6E-16 120.5 6.8 231 137-387 64-317 (417)
356 KOG0258 Alanine aminotransfera 99.2 5.6E-09 1.2E-13 98.2 20.9 301 117-445 88-437 (475)
357 PRK13578 ornithine decarboxyla 99.2 1.9E-09 4.1E-14 112.6 19.7 311 138-471 173-563 (720)
358 PRK15399 lysine decarboxylase 99.2 1.1E-08 2.4E-13 106.9 24.7 310 138-471 194-557 (713)
359 COG0112 GlyA Glycine/serine hy 99.1 8.3E-08 1.8E-12 91.2 27.0 309 116-472 38-389 (413)
360 PRK15400 lysine decarboxylase 99.1 3.8E-09 8.2E-14 110.3 18.2 307 137-470 193-556 (714)
361 PLN02452 phosphoserine transam 99.1 3.7E-08 7.9E-13 96.9 23.7 311 116-473 18-363 (365)
362 PF00464 SHMT: Serine hydroxym 99.1 1.6E-08 3.5E-13 99.2 20.1 308 116-466 32-398 (399)
363 PLN02414 glycine dehydrogenase 99.1 8.8E-08 1.9E-12 104.1 27.6 310 101-468 104-464 (993)
364 TIGR01365 serC_2 phosphoserine 99.0 7.6E-08 1.7E-12 94.7 23.7 289 139-473 39-373 (374)
365 PF12897 Aminotran_MocR: Alani 99.0 8.1E-08 1.7E-12 91.2 21.5 290 141-472 71-414 (425)
366 COG1003 GcvP Glycine cleavage 99.0 1.3E-07 2.9E-12 90.6 23.0 301 139-474 109-448 (496)
367 PF00282 Pyridoxal_deC: Pyrido 99.0 6.4E-08 1.4E-12 95.8 20.6 175 138-330 78-278 (373)
368 COG1921 SelA Selenocysteine sy 98.9 1.4E-07 3.1E-12 90.8 19.9 226 112-368 33-273 (395)
369 COG0403 GcvP Glycine cleavage 98.9 2.7E-06 5.9E-11 81.8 26.7 283 143-471 124-448 (450)
370 COG1982 LdcC Arginine/lysine/o 98.8 8.3E-07 1.8E-11 89.4 22.9 128 142-289 73-204 (557)
371 TIGR03811 tyr_de_CO2_Ent tyros 98.8 4.9E-06 1.1E-10 86.5 27.8 231 137-387 121-475 (608)
372 PRK12462 phosphoserine aminotr 98.8 7.5E-06 1.6E-10 80.0 26.1 309 117-473 16-362 (364)
373 PRK05367 glycine dehydrogenase 98.8 3.1E-06 6.7E-11 92.7 25.7 269 141-468 123-437 (954)
374 PF06838 Met_gamma_lyase: Meth 98.6 3.8E-05 8.2E-10 72.9 24.4 201 116-336 25-246 (403)
375 PF02347 GDC-P: Glycine cleava 98.6 5.4E-06 1.2E-10 82.0 18.6 275 140-467 111-429 (429)
376 PF03841 SelA: L-seryl-tRNA se 98.5 1.2E-07 2.5E-12 90.6 5.8 223 111-365 11-260 (367)
377 KOG2040 Glycine dehydrogenase 98.4 4.9E-05 1.1E-09 76.5 21.6 304 139-474 582-919 (1001)
378 KOG0629 Glutamate decarboxylas 98.4 1.8E-05 3.8E-10 76.0 17.5 305 142-472 144-508 (510)
379 TIGR00461 gcvP glycine dehydro 98.4 0.00018 3.8E-09 78.0 27.2 272 141-468 111-426 (939)
380 KOG1412 Aspartate aminotransfe 98.4 1.6E-05 3.4E-10 73.3 15.7 277 160-474 104-406 (410)
381 COG3033 TnaA Tryptophanase [Am 98.4 0.00024 5.2E-09 67.0 23.2 315 138-473 78-444 (471)
382 KOG3846 L-kynurenine hydrolase 98.3 8E-05 1.7E-09 68.6 18.4 328 111-474 74-462 (465)
383 PF05889 SLA_LP_auto_ag: Solub 98.3 8.1E-05 1.8E-09 72.0 17.9 301 142-472 59-389 (389)
384 KOG1383 Glutamate decarboxylas 98.1 0.00045 9.7E-09 67.5 18.4 335 96-474 76-447 (491)
385 PF04864 Alliinase_C: Allinase 97.9 0.0003 6.4E-09 66.5 14.3 193 246-470 138-362 (363)
386 PRK12566 glycine dehydrogenase 97.8 0.0072 1.6E-07 65.6 23.3 268 141-468 126-439 (954)
387 KOG2467 Glycine/serine hydroxy 97.7 0.01 2.2E-07 56.5 21.0 322 116-472 52-425 (477)
388 KOG1411 Aspartate aminotransfe 97.7 0.0005 1.1E-08 64.5 11.2 207 82-325 52-285 (427)
389 COG4100 Cystathionine beta-lya 97.6 0.011 2.4E-07 54.8 18.6 201 116-336 36-257 (416)
390 COG1932 SerC Phosphoserine ami 97.0 0.34 7.4E-06 46.6 23.5 198 247-473 145-363 (365)
391 KOG0628 Aromatic-L-amino-acid/ 96.9 0.15 3.3E-06 50.3 18.9 117 158-291 142-276 (511)
392 PLN02994 1-aminocyclopropane-1 96.2 0.03 6.4E-07 47.9 8.6 73 118-193 76-153 (153)
393 KOG3843 Predicted serine hydro 95.3 1.4 3E-05 40.5 15.4 99 232-337 142-249 (432)
394 KOG2040 Glycine dehydrogenase 86.2 48 0.001 34.9 18.1 109 148-285 172-281 (1001)
395 PF12138 Spherulin4: Spherulat 69.0 20 0.00043 33.5 7.3 52 233-284 18-71 (253)
396 PLN02672 methionine S-methyltr 65.3 85 0.0018 35.8 12.3 132 139-289 430-566 (1082)
397 COG2515 Acd 1-aminocyclopropan 62.8 1.2E+02 0.0025 29.1 10.8 34 256-291 251-284 (323)
398 COG1105 FruK Fructose-1-phosph 57.4 28 0.0006 33.4 6.0 53 233-289 116-168 (310)
399 cd01393 recA_like RecA is a b 56.5 77 0.0017 28.6 8.9 61 225-285 88-164 (226)
400 PF13481 AAA_25: AAA domain; P 54.2 27 0.00058 30.7 5.2 53 232-285 128-184 (193)
401 PF03652 UPF0081: Uncharacteri 53.5 65 0.0014 26.8 7.0 56 232-290 39-98 (135)
402 PRK03892 ribonuclease P protei 50.0 1.9E+02 0.0042 26.0 10.3 74 233-317 118-195 (216)
403 KOG2433 Uncharacterized conser 48.6 73 0.0016 31.3 7.2 58 116-178 434-498 (577)
404 smart00642 Aamy Alpha-amylase 47.2 66 0.0014 27.8 6.4 58 232-291 17-94 (166)
405 KOG3974 Predicted sugar kinase 46.5 30 0.00065 32.0 4.1 62 219-287 74-139 (306)
406 COG0352 ThiE Thiamine monophos 43.3 55 0.0012 29.6 5.4 96 233-336 24-121 (211)
407 KOG1465 Translation initiation 42.6 3.1E+02 0.0068 26.2 12.9 107 154-285 161-269 (353)
408 PF05621 TniB: Bacterial TniB 42.5 22 0.00047 33.9 2.8 120 238-362 139-271 (302)
409 cd01121 Sms Sms (bacterial rad 41.3 50 0.0011 32.8 5.3 57 227-285 141-205 (372)
410 cd01822 Lysophospholipase_L1_l 41.0 2.2E+02 0.0048 24.1 8.9 38 246-284 101-139 (177)
411 PF02677 DUF208: Uncharacteriz 39.7 70 0.0015 27.9 5.2 49 233-289 12-63 (176)
412 COG0108 RibB 3,4-dihydroxy-2-b 38.6 75 0.0016 28.3 5.3 35 246-285 156-190 (203)
413 PF13167 GTP-bdg_N: GTP-bindin 38.5 1.6E+02 0.0034 22.8 6.5 58 232-290 9-68 (95)
414 cd03315 MLE_like Muconate lact 37.8 3.4E+02 0.0074 25.2 12.0 144 118-286 87-237 (265)
415 COG1066 Sms Predicted ATP-depe 37.1 75 0.0016 31.8 5.5 58 225-284 149-214 (456)
416 cd04920 ACT_AKiii-DAPDC_2 ACT 36.7 84 0.0018 21.9 4.5 45 427-471 17-61 (63)
417 TIGR00250 RNAse_H_YqgF RNAse H 36.3 77 0.0017 26.1 4.8 56 232-290 36-94 (130)
418 cd07571 ALP_N-acyl_transferase 35.6 76 0.0016 29.8 5.4 38 248-285 40-77 (270)
419 cd03319 L-Ala-DL-Glu_epimerase 35.5 4.1E+02 0.0088 25.5 11.9 145 116-286 134-285 (316)
420 cd01840 SGNH_hydrolase_yrhL_li 34.5 2.7E+02 0.0059 23.2 12.4 49 233-286 66-115 (150)
421 PF06153 DUF970: Protein of un 33.6 56 0.0012 26.0 3.4 49 425-473 11-66 (109)
422 cd03328 MR_like_3 Mandelate ra 32.7 4.2E+02 0.009 26.0 10.3 145 118-285 140-291 (352)
423 cd04937 ACT_AKi-DapG-BS_2 ACT 32.2 99 0.0021 21.5 4.3 46 426-471 17-62 (64)
424 cd04915 ACT_AK-Ectoine_2 ACT d 31.8 1.2E+02 0.0026 21.4 4.6 46 426-471 17-64 (66)
425 PRK08535 translation initiatio 31.7 4.8E+02 0.01 25.2 10.9 139 117-285 85-227 (310)
426 KOG0352 ATP-dependent DNA heli 31.5 2.2E+02 0.0048 28.7 7.7 59 243-314 110-169 (641)
427 PF00154 RecA: recA bacterial 31.4 3.2E+02 0.007 26.5 8.8 109 159-285 58-185 (322)
428 PHA00008 J DNA packaging prote 31.0 32 0.0007 19.0 1.1 15 87-101 11-25 (26)
429 PF07894 DUF1669: Protein of u 30.9 3.8E+02 0.0082 25.5 8.9 49 233-290 136-186 (284)
430 TIGR00789 flhB_rel flhB C-term 30.3 43 0.00092 25.2 2.1 22 269-290 29-50 (82)
431 cd01821 Rhamnogalacturan_acety 30.1 1.3E+02 0.0028 26.4 5.8 50 233-284 96-150 (198)
432 TIGR00511 ribulose_e2b2 ribose 30.0 5E+02 0.011 24.9 11.2 122 142-289 103-227 (301)
433 PRK05782 bifunctional sirohydr 29.7 5.4E+02 0.012 25.1 11.4 43 319-362 287-331 (335)
434 cd01422 MGS Methylglyoxal synt 29.0 2.4E+02 0.0052 22.6 6.5 46 234-285 60-106 (115)
435 KOG1564 DNA repair protein RHP 28.9 3.4E+02 0.0074 25.8 8.1 65 221-285 176-258 (351)
436 PF07905 PucR: Purine cataboli 28.8 1.4E+02 0.0031 24.1 5.3 47 232-285 57-104 (123)
437 cd03320 OSBS o-Succinylbenzoat 28.7 4.8E+02 0.01 24.2 10.4 147 113-286 79-233 (263)
438 TIGR00416 sms DNA repair prote 28.2 1.2E+02 0.0027 31.0 5.8 56 227-284 153-216 (454)
439 PF13872 AAA_34: P-loop contai 27.7 39 0.00084 32.3 1.9 22 269-290 161-183 (303)
440 TIGR00140 hupD hydrogenase exp 27.6 3.4E+02 0.0074 22.1 7.7 47 143-193 2-48 (134)
441 cd03324 rTSbeta_L-fuconate_deh 27.6 6.5E+02 0.014 25.4 12.4 150 114-285 194-350 (415)
442 cd01827 sialate_O-acetylestera 27.4 1.1E+02 0.0024 26.5 4.8 19 266-284 134-152 (188)
443 smart00545 JmjN Small domain f 27.1 78 0.0017 20.3 2.6 22 264-285 14-35 (42)
444 cd04923 ACT_AK-LysC-DapG-like_ 27.0 1.3E+02 0.0028 20.3 4.2 45 427-471 17-61 (63)
445 COG1307 DegV Uncharacterized p 26.9 5.5E+02 0.012 24.3 10.8 53 142-194 67-122 (282)
446 PF00926 DHBP_synthase: 3,4-di 26.8 1.6E+02 0.0034 26.3 5.4 35 246-285 152-186 (194)
447 PF04726 Microvir_J: Microviru 26.6 27 0.00059 18.8 0.4 16 86-101 9-24 (24)
448 TIGR02012 tigrfam_recA protein 26.5 4E+02 0.0086 25.9 8.6 23 267-289 169-192 (321)
449 cd00984 DnaB_C DnaB helicase C 26.4 1.7E+02 0.0037 26.6 6.0 54 232-285 107-168 (242)
450 COG0742 N6-adenine-specific me 26.0 2.5E+02 0.0054 24.9 6.4 79 95-192 41-125 (187)
451 cd07576 R-amidase_like Pseudom 26.0 92 0.002 28.7 4.2 53 233-285 18-80 (254)
452 cd04917 ACT_AKiii-LysC-EC_2 AC 26.0 1.7E+02 0.0038 20.1 4.7 45 427-471 18-62 (64)
453 TIGR00506 ribB 3,4-dihydroxy-2 25.9 1.8E+02 0.0039 26.0 5.7 35 246-285 157-191 (199)
454 PRK13602 putative ribosomal pr 25.8 2.8E+02 0.0062 20.6 6.2 45 233-287 16-60 (82)
455 cd04936 ACT_AKii-LysC-BS-like_ 25.8 1.4E+02 0.0031 20.1 4.2 45 427-471 17-61 (63)
456 cd01123 Rad51_DMC1_radA Rad51_ 25.5 1.1E+02 0.0024 27.7 4.6 53 236-289 106-170 (235)
457 cd03316 MR_like Mandelate race 25.1 6.5E+02 0.014 24.5 11.2 144 117-285 140-296 (357)
458 PRK11823 DNA repair protein Ra 24.9 1.5E+02 0.0032 30.3 5.7 55 229-285 141-203 (446)
459 cd04918 ACT_AK1-AT_2 ACT domai 24.8 1.8E+02 0.0038 20.3 4.6 46 426-471 16-63 (65)
460 PRK10076 pyruvate formate lyas 24.8 42 0.00091 30.4 1.5 145 310-469 6-156 (213)
461 cd03325 D-galactonate_dehydrat 24.4 6.2E+02 0.013 24.8 9.8 119 142-285 163-283 (352)
462 PRK00910 ribB 3,4-dihydroxy-2- 24.3 1.2E+02 0.0026 27.5 4.3 34 246-284 168-201 (218)
463 KOG2792 Putative cytochrome C 24.2 2E+02 0.0043 26.8 5.6 82 92-176 123-223 (280)
464 COG3155 ElbB Uncharacterized p 24.1 85 0.0018 26.7 3.0 34 303-336 111-145 (217)
465 COG1088 RfbB dTDP-D-glucose 4, 24.1 6.6E+02 0.014 24.2 13.0 96 179-292 24-133 (340)
466 COG2870 RfaE ADP-heptose synth 23.9 1.3E+02 0.0027 30.1 4.6 41 246-292 143-183 (467)
467 PRK06371 translation initiatio 23.9 5.2E+02 0.011 25.2 8.8 37 247-285 216-254 (329)
468 cd04922 ACT_AKi-HSDH-ThrA_2 AC 23.4 2E+02 0.0044 19.6 4.7 46 426-471 17-64 (66)
469 cd07581 nitrilase_3 Uncharacte 23.3 93 0.002 28.7 3.6 19 267-285 61-79 (255)
470 COG0296 GlgB 1,4-alpha-glucan 23.1 92 0.002 33.2 3.8 26 267-292 214-239 (628)
471 PF13401 AAA_22: AAA domain; P 23.1 85 0.0018 25.2 3.0 27 264-290 71-98 (131)
472 cd00308 enolase_like Enolase-s 23.1 5.6E+02 0.012 23.1 9.7 46 232-285 156-201 (229)
473 cd00983 recA RecA is a bacter 22.9 5E+02 0.011 25.2 8.5 44 246-289 133-192 (325)
474 TIGR03573 WbuX N-acetyl sugar 22.7 7.2E+02 0.016 24.3 12.7 38 155-192 60-97 (343)
475 PF01008 IF-2B: Initiation fac 22.7 3.2E+02 0.007 25.7 7.3 121 142-286 95-216 (282)
476 PRK00014 ribB 3,4-dihydroxy-2- 22.5 1.3E+02 0.0029 27.5 4.2 39 246-289 172-211 (230)
477 PRK05234 mgsA methylglyoxal sy 22.5 2.3E+02 0.0049 23.8 5.4 47 234-286 65-112 (142)
478 TIGR00524 eIF-2B_rel eIF-2B al 22.1 7.1E+02 0.015 23.9 10.6 51 235-289 188-241 (303)
479 PRK00881 purH bifunctional pho 22.1 8.8E+02 0.019 25.3 10.4 40 233-285 466-505 (513)
480 COG2159 Predicted metal-depend 22.0 2.2E+02 0.0048 27.2 5.9 52 233-292 115-166 (293)
481 PF05213 Corona_NS2A: Coronavi 21.8 2.2E+02 0.0048 25.6 5.2 48 427-474 24-72 (248)
482 cd01535 4RHOD_Repeat_4 Member 21.8 4.8E+02 0.01 21.8 7.8 53 142-196 37-89 (145)
483 PF07085 DRTGG: DRTGG domain; 21.5 2.5E+02 0.0055 21.7 5.3 48 225-285 43-90 (105)
484 COG0036 Rpe Pentose-5-phosphat 21.4 6.3E+02 0.014 23.0 10.6 44 232-280 121-165 (220)
485 cd07578 nitrilase_1_R1 First n 21.4 1.5E+02 0.0032 27.5 4.6 53 233-285 19-83 (258)
486 COG3392 Adenine-specific DNA m 21.1 7E+02 0.015 23.5 9.3 105 183-296 205-313 (330)
487 cd07579 nitrilase_1_R2 Second 20.9 1.1E+02 0.0024 28.9 3.7 54 232-285 16-76 (279)
488 cd01018 ZntC Metal binding pro 20.8 6E+02 0.013 23.6 8.6 40 232-284 205-244 (266)
489 COG1625 Fe-S oxidoreductase, r 20.7 3.1E+02 0.0068 27.4 6.6 55 225-279 181-244 (414)
490 PF05913 DUF871: Bacterial pro 20.6 1.6E+02 0.0035 29.0 4.8 92 233-333 13-106 (357)
491 cd01834 SGNH_hydrolase_like_2 20.5 2.2E+02 0.0048 24.3 5.4 40 245-284 103-151 (191)
492 PRK08335 translation initiatio 20.4 7.4E+02 0.016 23.5 11.9 116 142-285 97-216 (275)
493 PRK04148 hypothetical protein; 20.4 5E+02 0.011 21.5 9.9 24 262-285 84-107 (134)
494 cd03318 MLE Muconate Lactonizi 20.4 8.2E+02 0.018 24.0 10.2 46 232-285 250-295 (365)
495 PF02603 Hpr_kinase_N: HPr Ser 20.4 97 0.0021 25.4 2.7 38 235-285 73-110 (127)
496 PRK14017 galactonate dehydrata 20.3 7E+02 0.015 24.7 9.4 46 232-285 239-284 (382)
497 PF13407 Peripla_BP_4: Peripla 20.1 2.2E+02 0.0048 25.9 5.5 41 233-285 45-85 (257)
No 1
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=100.00 E-value=7.8e-90 Score=655.94 Aligned_cols=427 Identities=58% Similarity=0.994 Sum_probs=411.8
Q ss_pred CChhHHHHHHHHhhhCCCCCCCccccccccCCCCeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHH
Q 011856 49 TLKKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETM 128 (476)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l 128 (476)
..++|+++++++++++|+|+++++|.|.+++++|+++++++|+|+||+|||+||||+++|+++.+||+||.|.+|+.+++
T Consensus 3 ~~~~S~~l~~~A~~~~pGGvnspvra~~~v~~~P~fi~~g~Ga~l~DvDGn~YIDy~~~~Gp~ilGH~~p~V~~Av~~~l 82 (432)
T COG0001 3 QFPKSEALFERAKKVIPGGVNSPVRAFKSVGGYPIFIERGKGAYLTDVDGNEYIDYVLGWGPLILGHAHPAVVEAVQEQL 82 (432)
T ss_pred CccchHHHHHHHhhhCCCCCCccccccCCCCCCCeeEEeccCCeEEeCCCCEeeehhccCcccccCCCCHHHHHHHHHHH
Confidence 46789999999999999999999999999988999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCcc
Q 011856 129 KKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVAT 208 (476)
Q Consensus 129 ~~~~~~~~~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~ 208 (476)
++|.+|+.|++.+.+++|.+++++|..|+|.|+||||||++.|||+||++|+|++||+|+++|||+++.++...|++...
T Consensus 83 ~~G~~fg~Pte~Ei~~Aell~~~~p~~e~vrfvnSGTEAtmsAiRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t 162 (432)
T COG0001 83 ERGLSFGAPTELEVELAELLIERVPSIEKVRFVNSGTEATMSAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAAT 162 (432)
T ss_pred HhcCCCCCCCHHHHHHHHHHHHhcCcccEEEEecchhHHHHHHHHHHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCccc
Confidence 99999999999999999999999998999999999999999999999999999999999999999999999999888877
Q ss_pred CCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEecc
Q 011856 209 LGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEV 288 (476)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv 288 (476)
...|.+.|+|.....+++.+||||+++++++++++++++|+||+||+.+|.|.++|.++||++|++||++||++||+|||
T Consensus 163 ~g~p~s~Gvp~~~a~~ti~~~yND~~al~~~~~~~g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEV 242 (432)
T COG0001 163 LGSPSSPGVPADVAKHTLVLPYNDLEALEEAFEEYGDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEV 242 (432)
T ss_pred CCCCCCCCCChhhhccEEEecCCCHHHHHHHHHHcCCcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecc
Confidence 77799999999999999999999999999999999899999999999999999999999999999999999999999999
Q ss_pred ccCccccccchhhccCCCCchhhhhhhcCCCCcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC-C
Q 011856 289 MTGFRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-P 367 (476)
Q Consensus 289 ~~g~r~g~~~~~~~~g~~pDi~t~sK~lg~G~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~ 367 (476)
+||||....+++++||++||++||+|.+|||+|+|++.+++++|+.+.+.++.++.+|+++||++++|++++|+.+.+ +
T Consensus 243 iTGFR~~~gGaq~~~gi~PDlttlGKiIGGGlP~ga~gGr~eiM~~~~p~g~vyqaGT~sgnplamaAG~atl~~l~~~~ 322 (432)
T COG0001 243 ITGFRVALGGAQGYYGVEPDLTTLGKIIGGGLPIGAFGGRAEIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLEELMTEE 322 (432)
T ss_pred hhhcccCCcccccccCcCcchhhhhhhhcCCcceeeeccHHHHHhhhCCCCCccccCCCCCcHHHHHHHHHHHHHHHhcc
Confidence 999998888999999999999999999999999999999999999999988999999999999999999999999987 5
Q ss_pred CHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCCc
Q 011856 368 GTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFE 447 (476)
Q Consensus 368 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~ 447 (476)
..++++.+++++|+++|++...+++++..+.+.|.|+.+.|.+..+.++.++...+.+...++.+.|+++||++.|+.+.
T Consensus 323 ~~y~~l~~~~~~L~~gl~~~~~~~g~~~~v~~~gsm~~i~F~~~~~~n~~da~~sd~~~~~~~~~~~l~~GV~l~ps~~e 402 (432)
T COG0001 323 GVYERLDALGERLAEGLRAAAERHGIPLTVNRVGSMFGIFFTEEGVRNYADAKRSDVERFAKFFHHLLNRGVYLAPSQFE 402 (432)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeecceEEEEecCCCCCCHHHHHhhchHHHHHHHHHHHhCCcccCCcccc
Confidence 68999999999999999999999999999999999999999988899999998888888888989999999999999888
Q ss_pred ceEEeCCCcHHHHHHHHHHHHHHHHHhh
Q 011856 448 AGFTSLAHSSDDIQHTITAAEKVKMRFL 475 (476)
Q Consensus 448 ~~~~~~~~t~e~i~~~~~~l~~~~~~~~ 475 (476)
..+++..||+++||+++++++++++++.
T Consensus 403 a~flS~ahte~di~~~~~a~~~~~~~~~ 430 (432)
T COG0001 403 AGFLSTAHTEEDIDRTLEAADEAFKELA 430 (432)
T ss_pred ceeeecccCHHHHHHHHHHHHHHHHHhh
Confidence 8999999999999999999999998764
No 2
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=100.00 E-value=4.3e-81 Score=629.08 Aligned_cols=473 Identities=80% Similarity=1.278 Sum_probs=400.2
Q ss_pred CcccccccccccccccCcccccccccCC-CCccccccccccccccccccCChhHHHHHHHHhhhCCCCCCCccccccccC
Q 011856 1 MAATITGVGVGLGLSCSSKLTNRFSSSA-GSSRCSVKMSVSVEEQRKNFTLKKSEEAFNVAKELMPGGVNSPVRAFKSVG 79 (476)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 79 (476)
|+++++|.++..+.+..+.......... +.+++.+++.+++.+ .+.+.+++|+++++++++++|+|+++++|.|.+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~S~~l~~ra~~~~pgGv~~~~r~~~~~~ 79 (474)
T PLN02482 1 MAAALAGSALGLSCSAKPSARRSSSQRRRAVRSSVIKMAVSVEE-KKKFTTTKSEEIFKAAKELMPGGVNSPVRAFKSVG 79 (474)
T ss_pred CchhhhccccccccccccccccCccccccccccchhhhhhhccc-cccCCChHHHHHHHHHHhhCCCCCCCcchhhcccC
Confidence 6666665544433333332222122211 122245666676654 44677889999999999999999999999887777
Q ss_pred CCCeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCCCCCeEE
Q 011856 80 GQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVR 159 (476)
Q Consensus 80 ~~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~~~~~~~~~~la~~l~~~~~~~e~v~ 159 (476)
++|+++.+++|+|+||+|||+||||.++++++++||+||+|.+|+.+|++++..++.+++.+.+|+|+|++.+|+.++++
T Consensus 80 ~~p~~~~~a~G~~l~D~dG~~yiD~~~g~g~~~lGh~~p~v~~av~~ql~~~~~~~~~~~~~~~lAe~l~~~~p~~~~v~ 159 (474)
T PLN02482 80 GQPIVFDRVKGSYAWDVDGNEYIDYVGSWGPAIIGHADDEVLAALAETMKKGTSFGAPCLLENVLAEMVIDAVPSVEMVR 159 (474)
T ss_pred CCCeeEEEeeeCEEEECCCCEEEEecccccccccCCCCHHHHHHHHHHHhhCCCCCCCCHHHHHHHHHHHHhCCCCCEEE
Confidence 78999999999999999999999999999999999999999999999999988888889999999999999998889999
Q ss_pred EeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHH
Q 011856 160 FVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENL 239 (476)
Q Consensus 160 ~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~ 239 (476)
|+|||+||++.|+|+||++|++.+||.++++|||+++..+...+.+......+...+++.....+++.+||||+++++++
T Consensus 160 f~~SGsEA~e~AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~nd~~~l~~~ 239 (474)
T PLN02482 160 FVNSGTEACMGVLRLARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPYNDLEAVKKL 239 (474)
T ss_pred EeCChHHHHHHHHHHHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecCCChHHHHHH
Confidence 99999999999999999999999999999999999987766544433222234455666555567889999999999999
Q ss_pred HhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCccccccchhhccCCCCchhhhhhhcCCC
Q 011856 240 FENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIGGG 319 (476)
Q Consensus 240 l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pDi~t~sK~lg~G 319 (476)
++++++++++||+||+++++|.+.|+++||++|+++|++||++||+|||++|||+|.+++++++|+.||++||||++++|
T Consensus 240 l~~~~~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGfR~g~~ga~~~~gv~PDi~t~gK~lggG 319 (474)
T PLN02482 240 FEANKGEIAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGFRIAYGGAQEYFGITPDLTTLGKVIGGG 319 (474)
T ss_pred HHhCCCceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCeecCcchHhHHhCCCCCEEEecchhhCC
Confidence 98777789999999999999999999999999999999999999999999999988889999999999999999999999
Q ss_pred CcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCceEeee
Q 011856 320 LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGY 399 (476)
Q Consensus 320 ~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~ 399 (476)
+|+|++++++++++.+.+.++.++.+||++||++|++++++|+.++++++++++++++++|+++|+++..+++.+..+.+
T Consensus 320 ~Pigav~g~~ei~~~~~~~~~~~~~~T~~gnpl~~aAala~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~g~~~~~~~ 399 (474)
T PLN02482 320 LPVGAYGGRREIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLQQPGTYEYLDKITKKLIQGILEAGKKAGHEMCGGY 399 (474)
T ss_pred CceEEEEEcHHHHHhhccCCCcccccCcchhHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHhcCCCEEEcc
Confidence 99999999999999987545677889999999999999999999988899999999999999999999887765544445
Q ss_pred eceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCCcceEEeCCCcHHHHHHHHHHHHHHHHHh
Q 011856 400 ISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHTITAAEKVKMRF 474 (476)
Q Consensus 400 ~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~~~~~t~e~i~~~~~~l~~~~~~~ 474 (476)
.+.|++++|..+++.++.+...++......+.+.|+++||++.+.+++..++++.||++|||++++++++++.++
T Consensus 400 v~g~~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~l~~~Gv~~~~~~~~~~~psl~ht~~dId~~l~al~~~l~~~ 474 (474)
T PLN02482 400 ISGMFGFFFTEGPVYNFADAKKSDTAKFARFHRGMLEEGVYLAPSQFEAGFTSLAHTEEDIDFTIAAAERVLARI 474 (474)
T ss_pred cceEEEEEEecCCccChhhhccCCHHHHHHHHHHHHHCCeEEeccCCCCCcCCCCCCHHHHHHHHHHHHHHHHhC
Confidence 556899999876666665555556666778999999999999987655456799999999999999999998763
No 3
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=5.2e-80 Score=582.55 Aligned_cols=370 Identities=32% Similarity=0.469 Sum_probs=340.0
Q ss_pred cCCCCeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcC--CCCCCCHHHHHHHHHHHhhCCCC
Q 011856 78 VGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT--SFGAPCLLENVLAEMVISAVPSI 155 (476)
Q Consensus 78 ~~~~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~--~~~~~~~~~~~la~~l~~~~~~~ 155 (476)
|++.|+++.+|+|+|+||.+|++||||.+|+++++|||+||.+++|+++|+++.+ +..+.++...+|+++|++..|..
T Consensus 21 Y~~~~~~~~~G~G~~v~D~~G~~YlDf~~Giav~~lGH~hP~iv~al~~Q~~kl~h~sn~~~~~~~~~la~~L~~~s~~~ 100 (404)
T COG4992 21 YGRLPVVIVRGEGAYVWDQQGREYLDFAAGIAVNNLGHCHPALVEALKEQAEKLWHVSNLFYNEPQAELAEKLVELSPFA 100 (404)
T ss_pred cCcCceeEEeccccEEECCCCCEeeeeccceeeeccCCCCHHHHHHHHHHHHHhhhcccccCChHHHHHHHHHHhhCccc
Confidence 3445899999999999999999999999999999999999999999999999954 45578999999999999999658
Q ss_pred CeEEEeCCHHHHHHHHHHHHHhccC---CceEEEEeCCCCCCchhHHhhcCCCCccCCC-CCCCCCCCCCCCceeeccCC
Q 011856 156 EMVRFVNSGTEACMGVLRLARAFTG---RERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTAPFN 231 (476)
Q Consensus 156 e~v~~~~sGseA~~~al~~ar~~~~---~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 231 (476)
++|+|+|||+||||+|+|+||.+++ +.+||.|.++|||++..+++.++.+.+..++ |..+ .+..+|||
T Consensus 101 d~vff~NSGaEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~--------g~~~vpfn 172 (404)
T COG4992 101 DRVFFCNSGAEANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLP--------GFRHVPFN 172 (404)
T ss_pred cEEEEcCCcHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCC--------CceecCCC
Confidence 9999999999999999999999987 7799999999999999999999886544332 3322 47889999
Q ss_pred CHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccchhhccCCCCchh
Q 011856 232 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLT 310 (476)
Q Consensus 232 d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pDi~ 310 (476)
|++++++++++ ++++||+||+|+++|+++++++||+++++||++||++||+||||||+ |+|++|+++|+|+.|||+
T Consensus 173 Di~al~~ai~~---~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk~fA~e~~gV~PDI~ 249 (404)
T COG4992 173 DIEALEAAIDE---DTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGKLFAYEHYGVEPDIL 249 (404)
T ss_pred CHHHHHHHhcc---CeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccchHHHHHHhCCCCCEE
Confidence 99999999985 89999999999999999999999999999999999999999999999 999999999999999999
Q ss_pred hhhhhcCCCCcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhh
Q 011856 311 TLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKK 390 (476)
Q Consensus 311 t~sK~lg~G~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 390 (476)
|++|++|||+|+|++++++++.+.+. +..|++||++||++|+++.++|+.+.++++.+++++.+++|+++|+++..+
T Consensus 250 tlaK~LgGG~PigA~la~~~~~~~~~---~G~HgSTfGGNpLacAv~~a~l~~l~~e~ll~~v~~~g~~~~~~L~~l~~~ 326 (404)
T COG4992 250 TLAKALGGGFPIGAMLATEEIASAFT---PGDHGSTFGGNPLACAVALAVLEVLLEEGLLENVREKGEYLLQRLRELKRR 326 (404)
T ss_pred EeeccccCCccceeeEEchhhhhcCC---CCcccCCCCcCHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999977777766 678999999999999999999999999999999999999999999999999
Q ss_pred cCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCCcceEE--eCCCcHHHHHHHHHHHH
Q 011856 391 AGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAE 468 (476)
Q Consensus 391 ~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~--~~~~t~e~i~~~~~~l~ 468 (476)
++++.++||.|+|+++++..+. ....+.+.|.++|+++.+.+.+.+|+ ++.+++|++++++++|+
T Consensus 327 ~~~v~~vRG~GLmiGiel~~~~-------------~a~~~~~~~~~~gvL~~~a~~~ViR~~PpL~i~~eei~~~~~~l~ 393 (404)
T COG4992 327 YPLVKEVRGRGLMIGIELKEPY-------------RARDIVRALREEGVLVLPAGPNVIRFLPPLVITEEEIDEALDALE 393 (404)
T ss_pred CCceeeeecceeEEEEEecCcc-------------cHHHHHHHHHHCCeEEecCCCCeEEecCCccCCHHHHHHHHHHHH
Confidence 9999999999999999996531 23678899999999999998888877 79999999999999999
Q ss_pred HHHHHh
Q 011856 469 KVKMRF 474 (476)
Q Consensus 469 ~~~~~~ 474 (476)
+++...
T Consensus 394 ~~l~~~ 399 (404)
T COG4992 394 RALAAA 399 (404)
T ss_pred HHHHHh
Confidence 999864
No 4
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=100.00 E-value=5.4e-76 Score=572.71 Aligned_cols=410 Identities=29% Similarity=0.424 Sum_probs=350.9
Q ss_pred cCChhHHHHHHHHhhhCCCCCCCccccccccCCCCeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHH
Q 011856 48 FTLKKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGET 127 (476)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~ 127 (476)
...++..++.++.+++++.++... .+|+++++++|+|+||+|||+||||.+++++.++||+||.|++|+.+|
T Consensus 13 ~~~~~~~~~~~r~~~~~~r~~~~~--------~~p~~~~ra~G~~l~DvdG~~ylDf~sgi~v~~~GH~hP~Vv~Av~~q 84 (447)
T COG0160 13 APGPKALELIERREEALARSYGRF--------RFPLVIVRAEGAYLYDVDGNEYLDFLSGIAVLNLGHNHPRVVEAVKRQ 84 (447)
T ss_pred CCCcchHHHHHHHHHHhccccccc--------cCcceEEecccCEEEeCCCCEEEEcccCcchhccCCCCHHHHHHHHHH
Confidence 345667788888888877655431 259999999999999999999999999999999999999999999999
Q ss_pred HHhcC--CCCC-CCHHHHHHHHHHHhhCCC--CCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhc
Q 011856 128 MKKGT--SFGA-PCLLENVLAEMVISAVPS--IEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKA 202 (476)
Q Consensus 128 l~~~~--~~~~-~~~~~~~la~~l~~~~~~--~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~ 202 (476)
+++.. ++.+ +.+...+++|+|.+..|. .++++|+|||+|||++|+|+||.+|++..||.|.++|||++..+++++
T Consensus 85 ~~~~~h~~~~~~~~e~~v~~ae~L~~~~p~~~~~~~~f~~sGaeA~E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT 164 (447)
T COG0160 85 LAKLNHTHTRDLYYEPYVELAEKLTALAPGSGLKKVFFGNSGAEAVEAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLT 164 (447)
T ss_pred HHHhhcccCCcccchhHHHHHHHHHHhCCcccCCeEEecCCcHHHHHHHHHHHHHHhCCCcEEEECCcccccchhhHHhc
Confidence 99854 3333 348899999999999984 789999999999999999999999999999999999999999999999
Q ss_pred CCCCcc-CCC-CCCCCCCCCCCCceeeccCC---------CHHHHHHHHhc---CCCCeEEEEEcccCCCCCcccCCHHH
Q 011856 203 GSGVAT-LGL-PDSPGVPKGATYETLTAPFN---------DVSALENLFEN---NKGEIAAIILEPVVGNSGFIAPKPDF 268 (476)
Q Consensus 203 g~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~---------d~~~le~~l~~---~~~~~a~vi~ep~~~~~G~i~~~~~~ 268 (476)
+..... ..+ |..+++.....++.++.|+. ..+.+++.+.. .+.++|++|+||+|+++|.+.|+++|
T Consensus 165 ~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~f 244 (447)
T COG0160 165 GSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGF 244 (447)
T ss_pred cCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHHHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHH
Confidence 875433 111 22222222222333333322 13446664532 45689999999999999999999999
Q ss_pred HHHHHHHHHHhCCEEEEeccccCc-cccccchhhccCCCCchhhhhhhcCCCCcEEEEEecHHHHHhhcCCCCccccCCC
Q 011856 269 LNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTL 347 (476)
Q Consensus 269 l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pDi~t~sK~lg~G~~iG~~~~~~~i~~~l~~~~~~~~~~t~ 347 (476)
|++|+++|++||++||+||||+|| |+|++|+++|+|+.|||+|+||++++|+|+|++++++++++ .. +..+.+||
T Consensus 245 l~~l~~~~~~~gillI~DEVQtG~GRTG~~fa~E~~gv~PDivt~aK~ig~G~Pl~avv~r~ei~~-~~---~g~~~~Tf 320 (447)
T COG0160 245 LKALRKLCREHGILLIADEVQTGFGRTGKMFAFEHFGVEPDIVTLAKSLGGGLPLSAVVGRAEIMD-WP---PGGHGGTF 320 (447)
T ss_pred HHHHHHHHHHcCCEEEEeccccCCCccccchhhhhcCCCCCEEEecccccCCCceeEEeccHHhcc-cC---CcccCCCC
Confidence 999999999999999999999999 99999999999999999999999999999999999999998 44 45688899
Q ss_pred CCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHH
Q 011856 348 SGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKF 427 (476)
Q Consensus 348 ~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~ 427 (476)
++||++|++++++|+.++++++.++..+++++++++|.++..+++.+.+|||.|+|++++|.++.. .+.|+.+..
T Consensus 321 ~GNpva~Aaa~AvL~vie~e~L~~~a~~~G~~l~~~L~~l~~~~~~IgdVRG~Glm~giE~v~d~~-----t~~p~~~~~ 395 (447)
T COG0160 321 GGNPVACAAALAVLDVIEEENLLERAAELGEYLRDRLEELQEKHPLIGDVRGLGLMIGVELVKDRD-----TKEPDAELA 395 (447)
T ss_pred CcCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHhhcCceecccccceEEEEEEecCCC-----CCCCCHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999986531 234677888
Q ss_pred HHHHHHHHHCCeEeccCC--CcceEE--eCCCcHHHHHHHHHHHHHHHHHh
Q 011856 428 ARFYRGMLEEGVYFAPSQ--FEAGFT--SLAHSSDDIQHTITAAEKVKMRF 474 (476)
Q Consensus 428 ~~~~~~l~~~Gv~~~~~~--~~~~~~--~~~~t~e~i~~~~~~l~~~~~~~ 474 (476)
.++...|+++|+++..++ .+.+++ +++++++++|+++++|++++.++
T Consensus 396 ~~i~~~~~~~Glil~~~G~~~nviRi~PPL~is~e~~d~~l~il~~al~~~ 446 (447)
T COG0160 396 AKIVARAFERGLLLLTCGPHGNVLRILPPLTISDEELDEGLDILEEALKEA 446 (447)
T ss_pred HHHHHHHHHcCCEEeccCCCCcEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 999999999999988887 455555 79999999999999999999875
No 5
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=100.00 E-value=5.5e-74 Score=576.94 Aligned_cols=425 Identities=49% Similarity=0.891 Sum_probs=372.1
Q ss_pred CChhHHHHHHHHhhhCCCCCCCccccccccC-CCCeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHH
Q 011856 49 TLKKSEEAFNVAKELMPGGVNSPVRAFKSVG-GQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGET 127 (476)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~ 127 (476)
.+++|.++++++++++|+|+++..|.+...+ +.|+++++++|+|+||.|||+||||.+++++.++||+||+|.+|+.+|
T Consensus 2 ~~~~s~~~~~~a~~~~p~g~~~~~~~~~~~~~~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q 81 (428)
T PRK12389 2 NFTKSEALHQEALEHIVGGVNSPSRSYKAVGGGAPVVMERGKGAYFYDVDGNKYIDYLAAYGPIITGHAHPHITKAITEA 81 (428)
T ss_pred CChhhHHHHHHHHhhCCCCCCCccccccccCCCCCeEEEeccCCEEEeCCCCEEEEccccccccccCCCCHHHHHHHHHH
Confidence 3578999999999999999998888775443 568999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCc
Q 011856 128 MKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVA 207 (476)
Q Consensus 128 l~~~~~~~~~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~ 207 (476)
++++..++.+++...+|+++|.+..|+.++++|++||+||++.|+|+||.++++.+||.++++|||++++++..++....
T Consensus 82 ~~~~~~~~~~~~~~~~la~~l~~~~p~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~ 161 (428)
T PRK12389 82 AENGVLYGTPTELEIEFAKMLKEAIPSLEKVRFVNSGTEAVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPS 161 (428)
T ss_pred HHhCCccCCCCHHHHHHHHHHHHhCCCCcEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCCccc
Confidence 99877677889999999999999998788999999999999999999999999999999999999999999988775432
Q ss_pred cCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEec
Q 011856 208 TLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDE 287 (476)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DE 287 (476)
....|...+++.....+++.+|+||++.+++.++++++++++||+||+++++|.+.|+++||++|+++|++||++||+||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DE 241 (428)
T PRK12389 162 TLGTPDSAGVPKSIAQEVITVPFNDIEALKEALDKWGDEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDE 241 (428)
T ss_pred ccCCCCCCCCCCcccCceEEcCCCCHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEc
Confidence 22123334444444457889999999999999987767899999999999999999999999999999999999999999
Q ss_pred cccCccccccchhhccCCCCchhhhhhhcCCCCcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCC
Q 011856 288 VMTGFRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEP 367 (476)
Q Consensus 288 v~~g~r~g~~~~~~~~g~~pDi~t~sK~lg~G~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~ 367 (476)
|++|||++.+++++++|+.||++|+||++++|+|+|++++++++++.+.+.+...+++||++||++|++++++|+.++++
T Consensus 242 V~tG~Rt~~~~a~~~~gv~PDivt~gK~lggG~Pi~av~~~~~i~~~~~~~~~~~~~~T~~gnpl~~Aaala~L~~l~~~ 321 (428)
T PRK12389 242 VITAFRFMYGGAQDLLGVEPDLTALGKIIGGGLPIGAYGGRKDIMEQVAPLGPAYQAGTMAGNPASMAAGIACLEVLQQE 321 (428)
T ss_pred cccccccCcchhhHHhCCCCCeeeechhhcCCCceeEEeEHHHHHhhhccCCCcccccCCccCHHHHHHHHHHHHHHhcc
Confidence 99999888788889999999999999999999999999999999998864344678899999999999999999999888
Q ss_pred CHHHHHHHHHHHHHHHHHHHhhhcCCceEe-eeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCC
Q 011856 368 GTYEYLNKITGELTQGIIDAGKKAGHAICG-GYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF 446 (476)
Q Consensus 368 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v-~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~ 446 (476)
++++++++++++|+++|+++..+++++.++ ++.| |++++|.+++..++.....++......+.+.|+++||++.+.+.
T Consensus 322 ~l~~~~~~~g~~l~~~L~~l~~~~~~~~~v~r~~g-~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~ 400 (428)
T PRK12389 322 GVYEKLDRLGAMLEEGILEAAEKHGITITINRLKG-ALTVYFTDEKVTNYDQAERSDGEAFGKFFKLMLNQGINLAPSKY 400 (428)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCc-EEEEEEeCCCCCChhhhcccCHHHHHHHHHHHHHCCcEeecCCC
Confidence 999999999999999999988888888887 5555 88999976544333222233445567888999999999998766
Q ss_pred cceEEeCCCcHHHHHHHHHHHHHHHHHh
Q 011856 447 EAGFTSLAHSSDDIQHTITAAEKVKMRF 474 (476)
Q Consensus 447 ~~~~~~~~~t~e~i~~~~~~l~~~~~~~ 474 (476)
+.+.+++.+|++||++++++|+++++++
T Consensus 401 ~~~~~~l~~t~e~id~~~~~l~~~l~~~ 428 (428)
T PRK12389 401 EAWFLTTAHTEEDIEETLEAVDRAFAQL 428 (428)
T ss_pred CCeeecCCCCHHHHHHHHHHHHHHHHhC
Confidence 6677899999999999999999998763
No 6
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=100.00 E-value=3.4e-72 Score=560.54 Aligned_cols=421 Identities=38% Similarity=0.648 Sum_probs=365.6
Q ss_pred ChhHHHHHHHHhhhCCCCCCCccccccccCCCCeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHH
Q 011856 50 LKKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMK 129 (476)
Q Consensus 50 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~ 129 (476)
.++|.++++++++++|+|+++..|.|.+.+++|+++.+++|+|+||.|||+||||.+++++.++||+||+|.+|+.+|++
T Consensus 4 ~~~s~~l~~~a~~~~p~g~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~yiD~~~g~~~~~lGh~~p~v~~ai~~q~~ 83 (433)
T PRK00615 4 IQEMTHTFSEACQYFPGGVNSPVRACRSVGITPPIVSSASGDIFIDSLGKTFIDFCGSWGSLIHGHSHPKICDAIQQGAE 83 (433)
T ss_pred cHHHHHHHHHHHhhCCCCcCCCcccccccCCCCceEEEeeeCEEEECCCCEEEEcccchhccccCCCCHHHHHHHHHHHH
Confidence 56789999999999999999999987666678999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCCCCHHHHHHHHHHHhhCCC-CCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchh---HHhhcCCC
Q 011856 130 KGTSFGAPCLLENVLAEMVISAVPS-IEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADP---FLVKAGSG 205 (476)
Q Consensus 130 ~~~~~~~~~~~~~~la~~l~~~~~~-~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~---~~~~~g~~ 205 (476)
++..++.+++...+|+++|.+.+|. .++|+|++||+||++.|+|+||.+++|.+||.+.++|||++++ .+..++..
T Consensus 84 ~~~~~~~~~~~~~~la~~L~~~~~~~~~~v~f~~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~ 163 (433)
T PRK00615 84 RGTSYGLTSEQEILFAEELFSYLGLEDHKIRFVSSGTEATMTAVRLARGITGRSIIIKFLGCYHGHADTLLQGISFSETS 163 (433)
T ss_pred hCCCCCCCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHHhhCCCEEEEEcCccCCCCcccCcccccCCCC
Confidence 9877777889999999999999974 5799999999999999999999999999999999999999844 33333321
Q ss_pred CccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 011856 206 VATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 285 (476)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~ 285 (476)
... .+...+ +.........++|||++++++.++++++++++||+||+++++|.+.|+++|+++|+++|++||++||+
T Consensus 164 ~~~--~~~~~~-~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~ 240 (433)
T PRK00615 164 LDT--LTHLVD-TDLAHPLTLSLPYNDFQIFQTVMNSLGHRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIM 240 (433)
T ss_pred cCc--CCCCCC-CCCCCCCeEeCCCCCHHHHHHHHHhcCCceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEE
Confidence 000 011111 11122345778999999999999876678999999999999999999999999999999999999999
Q ss_pred eccccCccccccchhhccCCCCchhhhhhhcCCCCcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhc
Q 011856 286 DEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLK 365 (476)
Q Consensus 286 DEv~~g~r~g~~~~~~~~g~~pDi~t~sK~lg~G~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~ 365 (476)
||||+|||+|.+|+++++|+.||++||||++|+|+|+|++++++++++.+.+.+..++++|+++||++|++++++|+.++
T Consensus 241 DEv~tG~R~G~~ga~~~~gv~PDi~~~gK~lggG~p~~av~~~~~i~~~~~~~~~~~~~~T~~g~p~~~aa~la~L~~i~ 320 (433)
T PRK00615 241 DEVVTGFRVAQGGAAAIYHVKPDITVYGKILGGGLPAAAVVAHKSIMDHLAPEGTIFQAGTLSGNPLAMAAGKASINLCR 320 (433)
T ss_pred EcccccccccHhHHHHhcCCCCCeEEEcccccCCcceeeeeecHHHHhhhcCCCCcccCCCCcccHHHHHHHHHHHHHHh
Confidence 99999999998999999999999999999999999999999999999998654455688899999999999999999998
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhhhcCC-ceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccC
Q 011856 366 EPGTYEYLNKITGELTQGIIDAGKKAGH-AICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPS 444 (476)
Q Consensus 366 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~ 444 (476)
++++++++++++++|+++|+++..+.+. +..++ .|+|++++|.+++.+++.+....+......+...|+++||++.+.
T Consensus 321 ~~~~~~~~~~~g~~l~~~l~~~~~~~g~~v~~~r-~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~ 399 (433)
T PRK00615 321 EQGFYTQLSTLEQNFLSPIEEMIRSQGFPVSLVR-YGSMFSFFFNENRPNNLAEAQLSDIEAFQTFYQSAFSKGVYLSPS 399 (433)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEe-eceEEEEEEeCCCCCChHHHhhCCHHHHHHHHHHHHHCCeeecCc
Confidence 8889999999999999999998776554 44555 899999999876555555554455666778999999999999988
Q ss_pred CCcceEEeCCCcHHHHHHHHHHHHHHHHHh
Q 011856 445 QFEAGFTSLAHSSDDIQHTITAAEKVKMRF 474 (476)
Q Consensus 445 ~~~~~~~~~~~t~e~i~~~~~~l~~~~~~~ 474 (476)
.++...++..||++|||+++++++++++++
T Consensus 400 ~~~~~~ls~~ht~~did~~~~a~~~~~~~~ 429 (433)
T PRK00615 400 PFEASFLSSAHSMENLDYAQNVLIDSLEKV 429 (433)
T ss_pred cccccceecCCCHHHHHHHHHHHHHHHHHH
Confidence 766677899999999999999999999875
No 7
>PRK07046 aminotransferase; Validated
Probab=100.00 E-value=2.6e-71 Score=557.90 Aligned_cols=420 Identities=27% Similarity=0.402 Sum_probs=359.8
Q ss_pred cCChhHHHHHHHHhhhCCCCC-CCccccccccCCCCeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHH
Q 011856 48 FTLKKSEEAFNVAKELMPGGV-NSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGE 126 (476)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~ 126 (476)
...++|.++++++++++|+|+ .+..+.|. .++|+++++++|+|+||+|||+||||.+++++.++||+||+|.+|+.+
T Consensus 25 ~~~~~S~~l~~ra~~~~p~g~~~~~~~~~~--~~~p~~~~~a~G~~v~D~DG~~yiD~~~g~g~~~lGh~~p~i~~Av~~ 102 (453)
T PRK07046 25 EAHPRSRALAARAAQHLLGGVPMHWMNDWP--TPFPLFVAEARGARFTDVDGHRYDDFCLGDTGAMFGHSPAPVARALAE 102 (453)
T ss_pred hcChhhHHHHHHHHhhCCCCcccccccccC--CCCCCeEEeeeeCEEEeCCCCEEEEecccccccccCCCCHHHHHHHHH
Confidence 356789999999999999999 44444442 246999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCC
Q 011856 127 TMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGV 206 (476)
Q Consensus 127 ~l~~~~~~~~~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~ 206 (476)
|++++..++.+++.+.+|+|+|++.+ +.++++|+|||+||++.|+|+||++|+|++||.|+++|||+++..+.....+.
T Consensus 103 q~~~~~~~~~~~~~~~~lAe~l~~~~-~~~~v~F~nSGtEA~e~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~ 181 (453)
T PRK07046 103 QARRGLTTMLPSEDAAWVGEELARRF-GLPYWQVATTATDANRFVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGR 181 (453)
T ss_pred HHHhCCCCCCCCHHHHHHHHHHHHHh-CCCEEEEECCHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCC
Confidence 99998778889999999999999998 48999999999999999999999999999999999999999887775431111
Q ss_pred ccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEe
Q 011856 207 ATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFD 286 (476)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~D 286 (476)
....+...+++.....+++.+||||++++++++. ++++++||+||+++++|.+.|+++||++|+++|++||++||+|
T Consensus 182 -~~~~~~~~g~~~~~~~~~~~~~~nd~~~l~~~l~--~~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~D 258 (453)
T PRK07046 182 -PVQRPGLLGQVHDLTATTRVVEFNDLAALEAALA--DGDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVID 258 (453)
T ss_pred -CCCCCCCCCCCccccCceEeeCCCCHHHHHHHhC--CCCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEE
Confidence 0011223344444445678899999999999995 3589999999999999999999999999999999999999999
Q ss_pred ccccCccccccchhhccCCCCchhhhhhhcCCCCcEEEEEecHHHHHhhcC------CCCccccCCCCCcHHHHHHHHHH
Q 011856 287 EVMTGFRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAP------AGPMYQAGTLSGNPLAMTAGIHT 360 (476)
Q Consensus 287 Ev~~g~r~g~~~~~~~~g~~pDi~t~sK~lg~G~~iG~~~~~~~i~~~l~~------~~~~~~~~t~~~~~~~~aaa~aa 360 (476)
||++ ||.|..+.++++|+.||++|+||+++||+|+|++++++++++.+.+ .+...+.+||++||++|++++++
T Consensus 259 EV~t-fr~g~Gg~~~~~gv~PDi~t~gK~lggG~Pi~av~g~~~i~~~~~~~~~~~~~~~~~~~~T~~gnpl~~aa~~a~ 337 (453)
T PRK07046 259 ETHT-ISSGPGGYTRAHGLEPDFLVVGKPIAGGVPCAVYGFSAELAERAQAAKASAPPGHSGIGTTLSANALAMAAMRAT 337 (453)
T ss_pred cccc-CccCCcchhHHhCCCccceeehhhhcCCCcceeeeehHHHHHHHhhccccCCCCCceeCCCCcccHHHHHHHHHH
Confidence 9999 7766666788899999999999999999999999999999998853 12345788999999999999999
Q ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhccc-chHHHHHHHHHHHHCCe
Q 011856 361 LKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKS-ETTKFARFYRGMLEEGV 439 (476)
Q Consensus 361 l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~Gv 439 (476)
|+.++++++++++++++++|+++|+++..+++++..+++.|+++.++|.+++..++.+...+ +......+...|+++||
T Consensus 338 L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv 417 (453)
T PRK07046 338 LAEVMTEAAYAHMLALAARLAAGLRAVIARHGLPWHVTRVGARVEFQFAPTPPRNGAEAAAALDPELEAALHLYLLNRGV 417 (453)
T ss_pred HHHHhcccHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCcEEEEEEeCCCCCCHHHHhcccCHHHHHHHHHHHHHCCC
Confidence 99998889999999999999999999988899999999999999999865544444433322 44556778889999999
Q ss_pred EeccCCCcceEEeCCCcHHHHHHHHHHHHHHHHHhh
Q 011856 440 YFAPSQFEAGFTSLAHSSDDIQHTITAAEKVKMRFL 475 (476)
Q Consensus 440 ~~~~~~~~~~~~~~~~t~e~i~~~~~~l~~~~~~~~ 475 (476)
++.+.+ +.++++..||++|||++++++++++++++
T Consensus 418 ~~~~~~-~~~~~~p~~t~~did~~~~~~~~~l~~~~ 452 (453)
T PRK07046 418 LITPFH-NMMLVCPATTAADVDRLVAAFDACLGELL 452 (453)
T ss_pred EEeccc-CcEEEeCCCCHHHHHHHHHHHHHHHHHHh
Confidence 998753 44567778999999999999999998764
No 8
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=100.00 E-value=3.2e-68 Score=537.97 Aligned_cols=423 Identities=60% Similarity=1.001 Sum_probs=365.3
Q ss_pred hHHHHHHHHhhhCCCCCCCccccccccCCCCeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhc
Q 011856 52 KSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKG 131 (476)
Q Consensus 52 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~ 131 (476)
+|+++++++++++|+|++++++.+...+++|+++.+++|+|+||.|||+||||.+++++.++||+||+|++|+++|++++
T Consensus 1 ~s~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~ 80 (423)
T TIGR00713 1 KSENLFEEAKQVFPGGVNSPVRAFKSVGPTPFFVARGKGAYLYDVDGNEYIDYVLSWGPLILGHAHPRVVEAVKEALERG 80 (423)
T ss_pred CcHHHHHHHHhhCCCCCCCcccccccCCCCCeeEEeccCCEEEeCCCCEEEEccccccccccCCCCHHHHHHHHHHHHhC
Confidence 47899999999999999988887755556799999999999999999999999999999999999999999999999987
Q ss_pred CCCCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCC
Q 011856 132 TSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGL 211 (476)
Q Consensus 132 ~~~~~~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~ 211 (476)
..++.+++...+|+++|++.++..++|+|++||+||++.|+|+||.++++++||.++++|||+++..+..++.+......
T Consensus 81 ~~~~~~~~~~~~lae~l~~~~~~~~~v~~~~sGseA~e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~ 160 (423)
T TIGR00713 81 TSYGAPTEAEILLAKEIISRVPSVEMVRFVNSGTEATMSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGL 160 (423)
T ss_pred CcCCCCCHHHHHHHHHHHHhCCcccEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCC
Confidence 76777888899999999999986789999999999999999999999999999999999999988877765543222222
Q ss_pred CCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccC
Q 011856 212 PDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTG 291 (476)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g 291 (476)
+..++++.......+.+|++|+++|+++++++++++++||+||+++++|.+.++++|+++|+++|++||++||+||+|+|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g 240 (423)
T TIGR00713 161 PTSPGVPEDFAKLTLVLPYNDLEALEEVFEEYGEEIAGVIVEPVAGNMGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTG 240 (423)
T ss_pred CCCCCCCcccccceEEeCCCCHHHHHHHHHHcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEccccc
Confidence 33334433444567888999999999999866568999999999999999999899999999999999999999999999
Q ss_pred ccccccchhhccCCCCchhhhhhhcCCCCcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHHH
Q 011856 292 FRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYE 371 (476)
Q Consensus 292 ~r~g~~~~~~~~g~~pDi~t~sK~lg~G~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~ 371 (476)
||+|.++.++++++.||++||||++++|+|+||+++++++++.+.+.....+++|+++||++|++++++|+.++++++.+
T Consensus 241 ~r~g~~~~~~~~~~~pDi~t~sK~l~~G~pig~v~~~~~i~~~~~~~~~~~~~~T~~~~~~~~aaa~a~l~~~~~~~~~~ 320 (423)
T TIGR00713 241 FRVALGGAQEYFGVEPDLTTLGKIIGGGLPVGAFGGRREIMERLAPEGPVYQAGTLSGNPLAMAAGLATLKLLDEEGVYT 320 (423)
T ss_pred cccCcchhHHHhCCCcchhhhhhhhcCCCceeeeeEHHHHHHhhCcCCCeeeccCCCCCHHHHHHHHHHHHHHhcccHHH
Confidence 98887778888999999999999999999999999999999998754345678899999999999999999998878999
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCCcceEE
Q 011856 372 YLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT 451 (476)
Q Consensus 372 ~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~ 451 (476)
+++++++++++.|+++..+++++.++++.|+|+++++..+...++.....++......+.+.|+++||++.+.+++.+++
T Consensus 321 ~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~l 400 (423)
T TIGR00713 321 ELDELAKRLAEGLSEVLEDTGIPHTVNRVGSMFSLFFTEEEVTNYADAKKSDTELFAKFFHEMLDKGVFLPPSQFEACFL 400 (423)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCeEEEeeccEEEEEEecCCCCChhhhhcccHHHHHHHHHHHHHCCeEEecCCccceee
Confidence 99999999999999988888888889999999999997543332221122334445678889999999998776666788
Q ss_pred eCCCcHHHHHHHHHHHHHHHHHh
Q 011856 452 SLAHSSDDIQHTITAAEKVKMRF 474 (476)
Q Consensus 452 ~~~~t~e~i~~~~~~l~~~~~~~ 474 (476)
+..+|+++|++++++|+++++++
T Consensus 401 ~~~~t~~~i~~~~~~l~~~l~~~ 423 (423)
T TIGR00713 401 SAAHTEEDIENTIEAAEEVFAEL 423 (423)
T ss_pred ECCCCHHHHHHHHHHHHHHHhhC
Confidence 87899999999999999998764
No 9
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=100.00 E-value=5e-69 Score=495.99 Aligned_cols=408 Identities=26% Similarity=0.344 Sum_probs=350.4
Q ss_pred ccCChhHHHHHHHHhhhCCCCCCCccccccccCCCCeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHH
Q 011856 47 NFTLKKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGE 126 (476)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~ 126 (476)
+++.+..+...+..++.+..+..++. ..|++|.+++|+|++|.+|++|||+.+|..+..+||+||+|++++.+
T Consensus 5 ~~~~~~~~~~~~~~~~~ls~~~~~~~-------~~Pl~Iv~~~~~ylyDe~G~ryLD~f~Gi~tvslGHchP~v~~a~~k 77 (442)
T KOG1404|consen 5 PYTGPSTDQVLQKRRAFLSPGLTSYY-------KKPLVIVRGEGQYLYDEEGRRYLDAFGGIVTVSLGHCHPDVVAAAVK 77 (442)
T ss_pred ccCCcchhhHHHHhhhcCCcceeccc-------cCCceEEecceEEEEcCCCceeehhhCCeEEEEcCCCChHHHHHHHH
Confidence 55566666666666666665554442 24999999999999999999999999999999999999999999999
Q ss_pred HHHhcC--CCCCCCHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcC
Q 011856 127 TMKKGT--SFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAG 203 (476)
Q Consensus 127 ~l~~~~--~~~~~~~~~~~la~~l~~~~~-~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g 203 (476)
|+.+.. ..++.++...+||+.|.+.+| +.+.++|+|||+|||++|+++||.|++.-+||.+.++|||.+..++.+++
T Consensus 78 Ql~~l~H~t~~~~~~pi~~~Ae~L~s~~P~~l~~vfF~nsGsEANelal~mar~Yt~~~diIa~r~~YHG~t~~t~glt~ 157 (442)
T KOG1404|consen 78 QLKKLYHTTSGYLNPPIHDLAEALVSKLPGDLKVVFFVNSGSEANELALKMARLYTGNLDIIARRNSYHGNTLYTLGLTG 157 (442)
T ss_pred hhhhhEEeeccccCCcHHHHHHHHHHhCCCCceEEEEecCCchHHHHHHHHHHHhcCCceEEEeeccccCCchhhccccc
Confidence 998743 346778888999999999999 68899999999999999999999999999999999999999999999999
Q ss_pred CCCccCCCCCC-CCCCCCCCCceeeccCCC----------HHHHHHHHhc-CCCCeEEEEEcccCCCCCcccCCHHHHHH
Q 011856 204 SGVATLGLPDS-PGVPKGATYETLTAPFND----------VSALENLFEN-NKGEIAAIILEPVVGNSGFIAPKPDFLNA 271 (476)
Q Consensus 204 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d----------~~~le~~l~~-~~~~~a~vi~ep~~~~~G~i~~~~~~l~~ 271 (476)
.+.++..+|.. .++.+...++.++.++.+ .+++++.+.. .+..++++|+|++++.+|++.++++||++
T Consensus 158 ~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka 237 (442)
T KOG1404|consen 158 LSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYAKELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKA 237 (442)
T ss_pred CCcccccCCCCCCcccccCCCCcccccCCCCchhhhHHHHHHHHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHH
Confidence 88777666554 354444445555555543 3556666643 34579999999999999999999999999
Q ss_pred HHHHHHHhCCEEEEeccccCc-cccccchhhccCCCCchhhhhhhcCCCCcEEEEEecHHHHHhhcCCCCccccCCCCCc
Q 011856 272 IRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGN 350 (476)
Q Consensus 272 l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pDi~t~sK~lg~G~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~ 350 (476)
..++|+++|.++|.||||+|| |+|.+|.++..|+.|||+|++|++|+|+|+|+++.++|+++.+.+ ...++.||++|
T Consensus 238 ~~~~v~k~Ggl~IaDEVqtGfGRtG~~wgfe~h~v~PDIvTmAKgiGnG~Pl~AVvtt~EIa~v~~~--~~~~fnTyggn 315 (442)
T KOG1404|consen 238 AYKVVRKRGGLFIADEVQTGFGRTGHMWGFESHGVVPDIVTMAKGIGNGFPLGAVVTTPEIADVLNQ--KSSHFNTYGGN 315 (442)
T ss_pred HHHHHHHcCCEEEehhhhhccccccccccccccCCCccHHHHHhhccCCCcceeeecCHHHHHHHHh--ccccccccCCC
Confidence 999999999999999999999 999999999999999999999999999999999999999999985 33488999999
Q ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHH
Q 011856 351 PLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARF 430 (476)
Q Consensus 351 ~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 430 (476)
|++|++++++|++++++++.++..+.+.+|+++|.++.++++++.+|||.|+|++++++++.... ..|.......+
T Consensus 316 P~a~avg~aVL~Vikee~LqE~aa~vG~yl~~~l~~l~d~h~iIGdVRG~GLm~GvE~V~dk~~~----~pp~~~~~~~i 391 (442)
T KOG1404|consen 316 PVACAVGLAVLKVIKEENLQENAAEVGSYLLEKLAALKDKHPIIGDVRGRGLMLGVELVSDKSEP----KPPATAEGAVI 391 (442)
T ss_pred chhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhcCCceeecccceeEEEEEEecccCCC----CCcchHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998765322 23445556778
Q ss_pred HHHHHHCCeEeccCCCc--ceEE--eCCCcHHHHHHHHHHH
Q 011856 431 YRGMLEEGVYFAPSQFE--AGFT--SLAHSSDDIQHTITAA 467 (476)
Q Consensus 431 ~~~l~~~Gv~~~~~~~~--~~~~--~~~~t~e~i~~~~~~l 467 (476)
.+.+.++|+++..++.. .+|+ ++++|++|+|.+++.+
T Consensus 392 ~~~cke~Gvlvg~g~i~G~vfriaPPlciT~edi~f~~~~~ 432 (442)
T KOG1404|consen 392 GEQCKELGVLVGKGGIHGNVFRIAPPLCITKEDIDFAVEYF 432 (442)
T ss_pred HHHHHHhCeeeecccccceEEEecCCeeccHHHHHHHHHHH
Confidence 89999999999766533 3455 7999999998888865
No 10
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=100.00 E-value=8.4e-68 Score=532.76 Aligned_cols=424 Identities=65% Similarity=1.078 Sum_probs=369.9
Q ss_pred hhHHHHHHHHhhhCCCCCCCccccccccCCCCeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHh
Q 011856 51 KKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKK 130 (476)
Q Consensus 51 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~ 130 (476)
++|++++|++++++|+|.+++...+++++.+|+++.+++|+|+||.|||+||||.+++++.++||+||+|.+++.+++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~G~~l~d~dG~~~lD~~~g~~~~~lGh~~p~i~~a~~~~~~~ 81 (426)
T PRK00062 2 SKSEELFERAKKLIPGGVNSPVRAFKSVGGTPRFIERAKGAYLYDVDGNEYIDYVGSWGPMILGHAHPEVVEAVIEAAEK 81 (426)
T ss_pred chhHHHHHHHHHhCCCCcCCcccccCCCCCCCeEEEeCcCCEEEeCCCCEEEEcccchhhhhcCCCCHHHHHHHHHHHHh
Confidence 57899999999999999999998888877778999999999999999999999999999999999999999999999998
Q ss_pred cCCCCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCC
Q 011856 131 GTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLG 210 (476)
Q Consensus 131 ~~~~~~~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~ 210 (476)
+..++++++...+|+++|++.+|+.++++|++||+||++.|++++|.++++++||.++++|||++.+++...+.......
T Consensus 82 ~~~~~~~~~~~~~la~~L~~~~~~~~~v~~~~sGseA~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~ 161 (426)
T PRK00062 82 GLSFGAPTELEVELAELVIELVPSIEMVRMVNSGTEATMSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLG 161 (426)
T ss_pred CCcCCCCCHHHHHHHHHHHHhCCCCCEEEEecCHHHHHHHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccC
Confidence 76666788889999999999887788999999999999999999999999999999999999999888776554322111
Q ss_pred CCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc
Q 011856 211 LPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT 290 (476)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~ 290 (476)
.+...+.+.......+.++|+|++++++.++++++++++||+||+++++|.+.++++||++|+++|++||+++|+||||+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~ 241 (426)
T PRK00062 162 LPDSPGVPEDFAKHTLTAPYNDLEAVEELFEEYGDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMT 241 (426)
T ss_pred CCCCCCCCcccccceEEcCCCCHHHHHHHHHhCCCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechh
Confidence 12222222212235688899999999999976667899999999999999999999999999999999999999999999
Q ss_pred CccccccchhhccCCCCchhhhhhhcCCCCcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHH
Q 011856 291 GFRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTY 370 (476)
Q Consensus 291 g~r~g~~~~~~~~g~~pDi~t~sK~lg~G~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~ 370 (476)
|||+|.++..+++++.||++++||++++|+|+|++++++++++.+...+..++++|+++||++|++++++|+.+++++++
T Consensus 242 G~r~g~~~~~~~~~~~pDi~~~gK~l~~G~p~ga~~~~~~i~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~~~~~ 321 (426)
T PRK00062 242 GFRVALGGAQGYYGVTPDLTTLGKIIGGGLPVGAFGGRREIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLKLLKEPGFY 321 (426)
T ss_pred ccccCCccHHHHhCCCcchHhhhhHhhCCCcceeeeEHHHHHHhhccCCCceecccCcCCHHHHHHHHHHHHHHhcchHH
Confidence 99888888888999999999999999999999999999999999864445667889999999999999999999888899
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCCcceE
Q 011856 371 EYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGF 450 (476)
Q Consensus 371 ~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~ 450 (476)
+++++++++++++|+++..+++++.++++.|+|+++++.+++..++.....++......+...|+++||++.+.+++.++
T Consensus 322 ~~~~~~~~~~~~~l~~~~~~~~~~~~vrg~G~~~~i~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~~Gv~v~~~~~~~~~ 401 (426)
T PRK00062 322 EELEALTKRLAEGLKEAAKKAGIPLTVNRVGSMFGLFFTDEPVTNYADAKKSDTERFARFFHAMLDEGVYLAPSQFEAGF 401 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCceEEEEecceEEEEEecCCCcchhhhccccHHHHHHHHHHHHHCCeEeecCCcCcee
Confidence 99999999999999998888898889999999999999754433332223345555678999999999999988777788
Q ss_pred EeCCCcHHHHHHHHHHHHHHHHHh
Q 011856 451 TSLAHSSDDIQHTITAAEKVKMRF 474 (476)
Q Consensus 451 ~~~~~t~e~i~~~~~~l~~~~~~~ 474 (476)
+++.+|++||++++++|+++++++
T Consensus 402 ~~~~~t~~ei~~~~~~l~~~l~~~ 425 (426)
T PRK00062 402 VSAAHTDEDIEKTLEAARKAFAAL 425 (426)
T ss_pred eeccCCHHHHHHHHHHHHHHHHhh
Confidence 899999999999999999999764
No 11
>PRK07678 aminotransferase; Validated
Probab=100.00 E-value=4.6e-68 Score=535.93 Aligned_cols=415 Identities=22% Similarity=0.310 Sum_probs=339.7
Q ss_pred ChhHHHHHHHHhhhCCCCCCCccccccccCCCCeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHH
Q 011856 50 LKKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMK 129 (476)
Q Consensus 50 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~ 129 (476)
+.++.++.++.+++++... +.+.. ..|+++.+++|+|+||.|||+||||.+++++.++||+||+|.+|+.+|++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~----~~~~~--~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~ 77 (451)
T PRK07678 4 TKQTDELLAKDEQYVWHGM----KPYNP--NATMVVAKAEGAWVTDIQGNRYLDGMSGLWCVNVGYGRKELAEAAYEQLK 77 (451)
T ss_pred ccCHHHHHHHhhcccCCCc----ccccc--CCCeeEEeeeeeEEEeCCCCEEEEccccHHhhcCCCCCHHHHHHHHHHHH
Confidence 5567788887666654322 11211 13899999999999999999999999999999999999999999999999
Q ss_pred hcCCC--CCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhcc------CCceEEEEeCCCCCCchhHHhh
Q 011856 130 KGTSF--GAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFT------GRERIIKFEGCYHGHADPFLVK 201 (476)
Q Consensus 130 ~~~~~--~~~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~------~~~~ii~~~~~yhg~~~~~~~~ 201 (476)
++..+ .+.++...+|+++|++.+|..++++|+|||+||++.|+|+||.++ ++.+||.++++|||++++++..
T Consensus 78 ~~~~~~~~~~~~~~~~lae~l~~~~~~~~~v~f~~sGseA~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~ 157 (451)
T PRK07678 78 TLSYFPLTQSHEPAIKLAEKLNEWLGGEYVIFFSNSGSEANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAA 157 (451)
T ss_pred hcCccccccCCHHHHHHHHHHHHhCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhc
Confidence 86433 357888899999999999876799999999999999999999986 5788999999999999999988
Q ss_pred cCCCCccCCC-CCCCCCCCCCCCceeeccC------CC---HHHHHHHHh-cCCCCeEEEEEcccCCCCCcccCCHHHHH
Q 011856 202 AGSGVATLGL-PDSPGVPKGATYETLTAPF------ND---VSALENLFE-NNKGEIAAIILEPVVGNSGFIAPKPDFLN 270 (476)
Q Consensus 202 ~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~------~d---~~~le~~l~-~~~~~~a~vi~ep~~~~~G~i~~~~~~l~ 270 (476)
++.......+ |..+++......+.+..++ +| ++.++++++ ++++++++||+||+++++|.+.|+++||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~ 237 (451)
T PRK07678 158 TGQAQRKYKYEPLAPGFLHVPPPDCYRMPGIESEDIYDLECVKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMK 237 (451)
T ss_pred CCCcccccccCCCCCCCEEeCCCccccccccCChHHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHH
Confidence 7754322211 2223332222223333332 22 334677776 44578999999999999999999999999
Q ss_pred HHHHHHHHhCCEEEEeccccCc-cccccchhhccCCCCchhhhhhhcCCC-CcEEEEEecHHHHHhhcCC---CCccccC
Q 011856 271 AIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAPA---GPMYQAG 345 (476)
Q Consensus 271 ~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pDi~t~sK~lg~G-~~iG~~~~~~~i~~~l~~~---~~~~~~~ 345 (476)
+|+++|++||++||+|||+||| |+|.+|+++++|+.|||+|+||+++|| +|+|++++++++++.+... ....|++
T Consensus 238 ~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~gv~PDivt~gK~lggG~~Pi~av~~~~~i~~~~~~~~~~~~~~h~~ 317 (451)
T PRK07678 238 AVKEICQKHGALLISDEVICGFGRTGKAFGFMNYGVKPDIITMAKGITSAYLPLSATAVKKEIYEAFKGKGEYEHFRHVN 317 (451)
T ss_pred HHHHHHHHcCCEEEEeehhhcCCcCchhHHHHhcCCCCCEEEeecccccCCcceeEEEEcHHHHHHHhccCcccccccCC
Confidence 9999999999999999999999 999998999999999999999999998 6999999999999988642 1346899
Q ss_pred CCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchH
Q 011856 346 TLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETT 425 (476)
Q Consensus 346 t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~ 425 (476)
||++||++|++++++|+.++++++.+++++++++|+++|+++..+++.+.++++.|+|+++++..+... ....+..
T Consensus 318 T~~gnp~~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~l~~~~~~~~~v~~vrg~Gl~~~i~~~~~~~~----~~~~~~~ 393 (451)
T PRK07678 318 TFGGNPAACALALKNLEIMENENLIERSAQLGELLLEQLKEELGEHPLVGDIRGKGLLVGIELVNDKET----KEPADND 393 (451)
T ss_pred CCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEeeceEEEEEEecCCcc----cCcCchH
Confidence 999999999999999999998999999999999999999988888899999999999999999753211 0111334
Q ss_pred HHHHHHHHHHHCCeEeccCCC------cceEE--eCCCcHHHHHHHHHHHHHHHHHh
Q 011856 426 KFARFYRGMLEEGVYFAPSQF------EAGFT--SLAHSSDDIQHTITAAEKVKMRF 474 (476)
Q Consensus 426 ~~~~~~~~l~~~Gv~~~~~~~------~~~~~--~~~~t~e~i~~~~~~l~~~~~~~ 474 (476)
....+...|+++||++.+.+. +.+++ ++.+|++|||+++++|+++++++
T Consensus 394 ~a~~i~~~l~~~Gv~~~~~g~~v~~~~~~lrl~Ppl~it~~eid~~~~~l~~~l~~~ 450 (451)
T PRK07678 394 KVASVVAACKEKGLIIGKNGDTVAGYNNVLTLSPPLVISSEEIAFIVGTLKTALERI 450 (451)
T ss_pred HHHHHHHHHHHCCcEEeecCccccCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHhc
Confidence 567888999999999976431 34555 68899999999999999999864
No 12
>PRK07482 hypothetical protein; Provisional
Probab=100.00 E-value=8.3e-68 Score=534.90 Aligned_cols=421 Identities=19% Similarity=0.191 Sum_probs=337.1
Q ss_pred hhHHHHHHHHhhhCCCCCCCccccccccCCCCeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHh
Q 011856 51 KKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKK 130 (476)
Q Consensus 51 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~ 130 (476)
.+++++.++.+++++.+.... ..+..-...|+++++++|+|+||.|||+||||.+++++.++||+||+|.+|+.+|+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~~i~~a~G~~l~D~dG~~ylD~~sg~~~~~lGh~~p~v~~Av~~q~~~ 81 (461)
T PRK07482 3 QKIDELLAWDRDHFFHPSTHL-GDHARGELPGRIVEGGEGIRITDAQGRRYIDAFAGLYCVNVGYGRTEVAEAIAEQAKE 81 (461)
T ss_pred ccHHHHHHhhhhhccCCcccc-cccccccCCCeeEEeeeeeEEEECCCCEEEEcccchhhhcCCCCCHHHHHHHHHHHHh
Confidence 467778887777665443322 1111101238999999999999999999999999999999999999999999999998
Q ss_pred cCC----CCCCCHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHHHhc------cCCceEEEEeCCCCCCchhHH
Q 011856 131 GTS----FGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAF------TGRERIIKFEGCYHGHADPFL 199 (476)
Q Consensus 131 ~~~----~~~~~~~~~~la~~l~~~~~-~~e~v~~~~sGseA~~~al~~ar~~------~~~~~ii~~~~~yhg~~~~~~ 199 (476)
+.. .+++++...+|+++|++..| +.++++|+|||+||++.|+|+||.+ ++|.+||.++++|||++..++
T Consensus 82 ~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~ 161 (461)
T PRK07482 82 LAYYHTYVGHGTEASITLSKRIIDRAPAGMSKVYYGLSGSDANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTG 161 (461)
T ss_pred cCccccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhh
Confidence 642 24678999999999999998 5789999999999999999999966 458899999999999999888
Q ss_pred hhcCCCCccCCC-CCCCCCCCCCCCceeecc----------CCCHHHHHHHHh-cCCCCeEEEEEcccCCCCCcccCCHH
Q 011856 200 VKAGSGVATLGL-PDSPGVPKGATYETLTAP----------FNDVSALENLFE-NNKGEIAAIILEPVVGNSGFIAPKPD 267 (476)
Q Consensus 200 ~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~----------~~d~~~le~~l~-~~~~~~a~vi~ep~~~~~G~i~~~~~ 267 (476)
..++.......+ |...++...........+ .+++++|++++. ..++++++||+||+++++|.+.|+++
T Consensus 162 s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~ 241 (461)
T PRK07482 162 SLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQFSAYCADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAG 241 (461)
T ss_pred hccCCchhhhccCCCCCCCEEcCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHH
Confidence 877653222111 111111100000011100 014678888885 34568999999999999999999999
Q ss_pred HHHHHHHHHHHhCCEEEEeccccCc-cccccchhhccCCCCchhhhhhhcCCCC-cEEEEEecHHHHHhhcCC----CCc
Q 011856 268 FLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGL-PVGAYGGRRDIMEMVAPA----GPM 341 (476)
Q Consensus 268 ~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pDi~t~sK~lg~G~-~iG~~~~~~~i~~~l~~~----~~~ 341 (476)
|+++|+++|++||++||+|||+||| |+|.+|+++++|+.||++|+||+++||+ |+|++++++++++.+... +..
T Consensus 242 yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~ 321 (461)
T PRK07482 242 YWPAIQAVLKKYDILLIADEVVTGFGRLGSMFGSDHYGIEPDLITVAKGLTSAYAPLSGSIVGEKVWDVLEQGSDEHGAI 321 (461)
T ss_pred HHHHHHHHHHHhCCEEEEeccccCCCcCcchhhHHhcCCCCCEEEEccccccCccccceeeecHHHHHHHhcccccCCcc
Confidence 9999999999999999999999999 9999999999999999999999999996 999999999999887531 234
Q ss_pred cccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcc
Q 011856 342 YQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKK 421 (476)
Q Consensus 342 ~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~ 421 (476)
.|++||++||++|++++++|+.++++++.+++++++++|+++|+++..+++.+.++++.|+|++++|.++.... .. ..
T Consensus 322 ~h~~T~~gnpl~~Aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Glm~giel~~~~~~~-~~-~~ 399 (461)
T PRK07482 322 GHGWTYSGHPICAAAALANLDILERENLVGNAAEVGAYFRARLRAAFGDHPLVGEVRGVGMLAAVEFVADRDDR-TP-FD 399 (461)
T ss_pred ccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeeceeEEEEEeccCCCcC-CC-CC
Confidence 68899999999999999999999999999999999999999999998889999999999999999997532110 00 00
Q ss_pred cchHHHHHHHHHHHHCCeEeccC-CCcceEE--eCCCcHHHHHHHHHHHHHHHHHh
Q 011856 422 SETTKFARFYRGMLEEGVYFAPS-QFEAGFT--SLAHSSDDIQHTITAAEKVKMRF 474 (476)
Q Consensus 422 ~~~~~~~~~~~~l~~~Gv~~~~~-~~~~~~~--~~~~t~e~i~~~~~~l~~~~~~~ 474 (476)
++......+...|+++||++.+. ..+.+++ ++++|++||++++++|+++++++
T Consensus 400 ~~~~~~~~i~~~~~~~Gvl~~~~~~~~~i~~~Ppl~it~~ei~~~~~~l~~~l~~~ 455 (461)
T PRK07482 400 PALKIGPQVSAAALERGVIARAMPHGDILGFAPPLVLTRAEADEIVAIAKDAVDEV 455 (461)
T ss_pred hhhHHHHHHHHHHHHCCcEEecCCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 11123467889999999998653 1234443 79999999999999999999765
No 13
>PRK06062 hypothetical protein; Provisional
Probab=100.00 E-value=3e-67 Score=529.45 Aligned_cols=391 Identities=25% Similarity=0.355 Sum_probs=328.1
Q ss_pred CCeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcCC--CCCCCHHHHHHHHHHHhhCCC-CCe
Q 011856 81 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTS--FGAPCLLENVLAEMVISAVPS-IEM 157 (476)
Q Consensus 81 ~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~--~~~~~~~~~~la~~l~~~~~~-~e~ 157 (476)
.|+++.+++|+|+||+|||+||||.+++++.++||+||+|.+|+.+|++++.+ ..+.++...+|+++|++..|+ .++
T Consensus 35 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~ 114 (451)
T PRK06062 35 NPMVIAGAEGSYVWDYEGRRYLDFSSQLVNTNIGHQHPKVVAAIQEQAARLCTVAPAHANDARSEAARLIAERAPGDLSK 114 (451)
T ss_pred CCceEEeceeeEEEECCCCEEEEcccCHHhhcCCCCCHHHHHHHHHHHHhcCCcCCccCCHHHHHHHHHHHHhCCCCCCE
Confidence 48999999999999999999999999999999999999999999999998643 346788899999999999984 789
Q ss_pred EEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccC---CC--
Q 011856 158 VRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPF---ND-- 232 (476)
Q Consensus 158 v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~d-- 232 (476)
|+|++||+||++.|+|+||.+++|.+||.++++|||++.+++..++........|...++........+.+++ +|
T Consensus 115 v~f~~SGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 194 (451)
T PRK06062 115 VFFTNGGADANEHAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEE 194 (451)
T ss_pred EEEcCChHHHHHHHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccCCCChHH
Confidence 9999999999999999999999999999999999999999998877543211112222222211122233333 33
Q ss_pred -----HHHHHHHHhcC-CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccchhhccCC
Q 011856 233 -----VSALENLFENN-KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGV 305 (476)
Q Consensus 233 -----~~~le~~l~~~-~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~ 305 (476)
+++|+++++.+ ++++++||+||+++++|.+.|+++||++|+++|++||++||+|||++|| |+|.+|+++++|+
T Consensus 195 ~~~~~~~~le~~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~~~~gv 274 (451)
T PRK06062 195 ECERALAHLERVIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTGKWFAIEHFGV 274 (451)
T ss_pred HHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCcHHHHHHhcCC
Confidence 67888888643 3689999999999999999999999999999999999999999999999 9999999999999
Q ss_pred CCchhhhhhhcCCCC-cEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHH-HHHHHH
Q 011856 306 TPDLTTLGKIIGGGL-PVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKIT-GELTQG 383 (476)
Q Consensus 306 ~pDi~t~sK~lg~G~-~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~-~~l~~~ 383 (476)
.||++||||++++|+ |+|++++++++++.+.. ....+++||++||++|++++++|+.++++++.+++++++ ++++++
T Consensus 275 ~PDi~t~gK~lggG~~Pigav~~~~~i~~~~~~-~~~~~~~T~~gnpl~~Aaa~a~L~~l~~~~l~~~~~~~G~~~l~~~ 353 (451)
T PRK06062 275 VPDLITFAKGVNSGYVPLGGVAISEAIAATFAD-RPYPGGLTYSGHPLACAAAVATINAMEEEGIVENAARIGAEVLGPG 353 (451)
T ss_pred CCCeeeechhhhcCCcCcEEEEEcHHHHHHhcc-CCCCCCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 999999999999995 99999999999998863 234577899999999999999999998888999999999 699999
Q ss_pred HHHHhhhcCCceEeeeeceeEEEEEecCCCc--CchhhcccchHHHHHHHHHHHHCCeEeccCCCcceEE--eCCCcHHH
Q 011856 384 IIDAGKKAGHAICGGYISGMFGFFFTEGPVY--NFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDD 459 (476)
Q Consensus 384 L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~--~~~~t~e~ 459 (476)
|+++..+++.+.++++.|+|+++++..++.. .+... .........+.+.|+++||++.+.+ +.+++ ++.+|++|
T Consensus 354 L~~l~~~~~~v~~vrG~Gl~~gve~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~Gvl~~~~~-~~lrl~ppl~~t~~e 431 (451)
T PRK06062 354 LRELAERHPSVGEVRGLGVFWALELVADRETREPLAPY-GASSAAMAAVKAACKERGLLPFVNG-NRIHVVPPCTVTEDE 431 (451)
T ss_pred HHHHHhcCCcEEeEeccccEEEEEEcccccccCCCccc-chhhHHHHHHHHHHHHCCcEEeecC-CEEEEECCccCCHHH
Confidence 9999888888899999999999999743211 10000 0112345678899999999987643 34555 67999999
Q ss_pred HHHHHHHHHHHHHHh
Q 011856 460 IQHTITAAEKVKMRF 474 (476)
Q Consensus 460 i~~~~~~l~~~~~~~ 474 (476)
||+++++|+++++++
T Consensus 432 id~~~~~l~~~l~~~ 446 (451)
T PRK06062 432 VREGLAILDAALAVA 446 (451)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999999764
No 14
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=100.00 E-value=3.3e-68 Score=514.31 Aligned_cols=390 Identities=28% Similarity=0.327 Sum_probs=328.8
Q ss_pred CeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcCC---CCCCCHHHHHHHHHHHhhCC-C-CC
Q 011856 82 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTS---FGAPCLLENVLAEMVISAVP-S-IE 156 (476)
Q Consensus 82 p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~---~~~~~~~~~~la~~l~~~~~-~-~e 156 (476)
|+++.+++|.|+||.|||+|||..++||++++||++|+|.+|+.+|+++..+ ++..++...+|+++|++..| + .+
T Consensus 27 ~~~i~~aeG~yl~d~~G~r~lDg~sg~W~~~~Gh~~~~i~~Ai~~Q~~~l~~~~~~~~t~~Pa~~LA~~L~~~aP~~~l~ 106 (449)
T COG0161 27 PRVIVRAEGVYLTDIDGRRYLDGMSGLWCVNHGHGRPEIAEAIKKQLDKLPHVMFGGFTHEPAIELAEKLAELAPEGGLD 106 (449)
T ss_pred ceeeeecceeEEEeCCCCEEEecccHHHHhhcCcCCHHHHHHHHHHHHhCCchhhcccCCchHHHHHHHHHHhCCCCCcc
Confidence 8999999999999999999999999999999999999999999999998543 34456669999999999999 6 89
Q ss_pred eEEEeCCHHHHHHHHHHHHHhc------cCCceEEEEeCCCCCCchhHHhhcCCCCcc-CCC-CCCCCCCCCCCCceeec
Q 011856 157 MVRFVNSGTEACMGVLRLARAF------TGRERIIKFEGCYHGHADPFLVKAGSGVAT-LGL-PDSPGVPKGATYETLTA 228 (476)
Q Consensus 157 ~v~~~~sGseA~~~al~~ar~~------~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~-~~~-~~~~~~~~~~~~~~~~~ 228 (476)
+|+|++|||||++.|+|+|+.| ++|.++|...++|||.+.++++.+|..... ..+ +..++..+...+..+..
T Consensus 107 ~vFf~~sGSeAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~ 186 (449)
T COG0161 107 HVFFTDSGSEAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRR 186 (449)
T ss_pred EEEEeCCchHHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCccccc
Confidence 9999999999999999999887 346679999999999999999988842211 111 11111111111111111
Q ss_pred cC---------CCHHHHHHHHhcCC-CCeEEEEEcccCCC-CCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccc
Q 011856 229 PF---------NDVSALENLFENNK-GEIAAIILEPVVGN-SGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAY 296 (476)
Q Consensus 229 ~~---------~d~~~le~~l~~~~-~~~a~vi~ep~~~~-~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~ 296 (476)
+. ..++.||+++.+++ +++++||+||+.+. ||.+.|+++||++++++|++||++||+|||.||| |+|.
T Consensus 187 ~~~~~~~~~~~~~a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFGRTG~ 266 (449)
T COG0161 187 GFFGEGDEEFAEAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGRTGK 266 (449)
T ss_pred CCCCCChHHHHHHHHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCCCcCch
Confidence 11 23677888888765 89999999999987 9999999999999999999999999999999999 9999
Q ss_pred cchhhccCCCCchhhhhhhcCCC-CcEEEEEecHHHHHhhcC--CCCccccCCCCCcHHHHHHHHHHHHHhcCCCHHHHH
Q 011856 297 GGAQEYFGVTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAP--AGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYL 373 (476)
Q Consensus 297 ~~~~~~~g~~pDi~t~sK~lg~G-~~iG~~~~~~~i~~~l~~--~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~ 373 (476)
+|+++++|++|||+|++|++++| +|+|++++++++.+.+.. .+.+.|+.||++||++|++|++.|++++++++.+++
T Consensus 267 ~FA~e~~gi~PDi~~~aKGLT~GY~Pl~a~l~~~~I~~~~~~~~~~~f~HG~TYsghPlacAaAla~L~i~e~e~l~~~~ 346 (449)
T COG0161 267 MFACEHAGIVPDILCLAKGLTGGYLPLSAVLTSDRIYEAFSDGDAGAFMHGHTYSGNPLACAAALANLDILEEEDLLERV 346 (449)
T ss_pred hhhhhhcCCCCCeeeecccccccchhhHhHhhhHHHHHHHhcccCCeeccCCccccCHHHHHHHHHHHHHHHhcCHHHHH
Confidence 99999999999999999999999 699999999999999875 356789999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCCcc-eEEe
Q 011856 374 NKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEA-GFTS 452 (476)
Q Consensus 374 ~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~-~~~~ 452 (476)
++.+.+|.++|+++..+++.+.+||+.|++.++++..+....... +.....++...++++|++++|.+... +.++
T Consensus 347 ~~~~~~l~~~L~~~l~~~p~VgdVR~~Gli~~iElv~d~~t~~~f----~~~~~~~~~~~~~e~Gl~iRp~g~~i~~~PP 422 (449)
T COG0161 347 AEIGAYLQAGLQAALADHPLVGDVRGLGLIGAIELVADKATKTPF----EARVGARVRAAALERGLLIRPLGDVIYLMPP 422 (449)
T ss_pred HHHHHHHHHHHHHhcccCCcEEEeeccceEEEEEEecccccccch----hhhHHHHHHHHHHHCCeEEeecCCEEEEcCC
Confidence 999999999999976778999999999999999998653221100 23445678889999999999986421 2347
Q ss_pred CCCcHHHHHHHHHHHHHHHHHhh
Q 011856 453 LAHSSDDIQHTITAAEKVKMRFL 475 (476)
Q Consensus 453 ~~~t~e~i~~~~~~l~~~~~~~~ 475 (476)
+++|++|||++++++.+++++..
T Consensus 423 liit~~eid~l~~~l~~al~~~~ 445 (449)
T COG0161 423 LIITREEIDELVDALREALDETL 445 (449)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998653
No 15
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=6.5e-68 Score=492.65 Aligned_cols=412 Identities=44% Similarity=0.680 Sum_probs=354.8
Q ss_pred hHHHHHHHHhhhCCCCCCCccccccccCCCCeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhc
Q 011856 52 KSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKG 131 (476)
Q Consensus 52 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~ 131 (476)
.+.+....+...++++.+...+....+.++|+++++++|+.+||.||++||||.++|++..+||++|++.+++.+|+.+.
T Consensus 9 ~~~~~~~~~~~~~~~i~~~~~~~~~t~a~~pv~~~~gkg~kl~D~~g~EyiD~~ssw~~~~~Ghanpev~ral~~q~~k~ 88 (433)
T KOG1401|consen 9 KSEDASNAASVSMPGIVEEKTRIVSTYARYPVVIESGKGSKLFDPDGKEYIDFTSSWAVTILGHANPEVARALAEQAKKL 88 (433)
T ss_pred cCcccccchhhccccccccceEEeeecCCCceeeecceeeeeecCCcceeeeeccceeccccCCCCHHHHHHHHHHHhhh
Confidence 34455556677788888888888888888999999999999999999999999999999999999999999999999995
Q ss_pred C--CCCCCCHHHHHHHHHHHhhCC--CCCeEEEeCCHHHHHHHHHHHHHhccCCce------EEEEeCCCCCCchhHHhh
Q 011856 132 T--SFGAPCLLENVLAEMVISAVP--SIEMVRFVNSGTEACMGVLRLARAFTGRER------IIKFEGCYHGHADPFLVK 201 (476)
Q Consensus 132 ~--~~~~~~~~~~~la~~l~~~~~--~~e~v~~~~sGseA~~~al~~ar~~~~~~~------ii~~~~~yhg~~~~~~~~ 201 (476)
. .+++......++++.+.+... +.++|+|+|||||||+.||++||.++..+. +|.|.++|||.+.+++..
T Consensus 89 ~hs~~~~~t~eav~l~~~l~~~~~~~~~~rvff~nsGTeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~ 168 (433)
T KOG1401|consen 89 GHSSNGYFTLEAVELEEVLSAVLGKGSAERVFFCNSGTEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSV 168 (433)
T ss_pred eeccCccccHHHHHHHHHHHhcccCCCccEEEEecCCcHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHh
Confidence 2 233444447889999888774 789999999999999999999999876554 999999999999999998
Q ss_pred cCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCC
Q 011856 202 AGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGA 281 (476)
Q Consensus 202 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~ 281 (476)
++...+.. |..+ ..+++..++|||..++++.++.+.+++++||+||++++||.+++.++|+..|+++|+++|+
T Consensus 169 ~~~s~y~~--~~~p-----~~p~v~~~~ynd~t~l~k~~~~h~~~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~v 241 (433)
T KOG1401|consen 169 TGNSKYGL--PFDP-----IAPDVVTAEYNDSTALEKLFESHKGEIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGV 241 (433)
T ss_pred hcccccCC--CCCC-----CCCceeecccCCHHHHHHHHHhCCCceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCc
Confidence 86654442 2222 2346888999999999999999988999999999999999999999999999999999999
Q ss_pred EEEEeccccCc-cccccchhhccCCCCchhhhhhhcCCCCcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHH
Q 011856 282 LLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHT 360 (476)
Q Consensus 282 llI~DEv~~g~-r~g~~~~~~~~g~~pDi~t~sK~lg~G~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aa 360 (476)
+||+|||+||| |+|..|++++++++|||+|++|.++||+|+|++++++++++.+.+...++|++||++||++|.++..+
T Consensus 242 l~I~DEV~tG~gR~g~~~a~e~~~~~PDI~t~aK~L~gGlPigA~~v~~kV~~~i~~~~~l~hg~Tf~gnpLacsa~~~~ 321 (433)
T KOG1401|consen 242 LLIFDEVQTGLGRLGYGWAQEYFGVTPDITTVAKPLGGGLPIGATGVRDKVAEMISPGDHLYHGGTFSGNPLACSAGIKV 321 (433)
T ss_pred eEEeehhhhCccccchHHHHHHhCcCCcceeehhhccCCceeEEEeehHHHHhhcCCCCccccCcccCCChhhhhHHHHH
Confidence 99999999999 99999999999999999999999999999999999999999999877789999999999999999999
Q ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCceEe-eeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCe
Q 011856 361 LKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICG-GYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGV 439 (476)
Q Consensus 361 l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v-~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv 439 (476)
|+.+.++++++++.+.++.|++.|.+...+.+..... .+.|+++++++..+ +..+.+...........+...+++.|+
T Consensus 322 l~~l~~~e~~k~vs~~~k~L~~~l~e~~~~~~~~i~g~~grgl~ig~~~~~p-~~~~~d~~~~~~ll~~~~~~~~~~~gv 400 (433)
T KOG1401|consen 322 LDELKDPETLKNVSKIGKELRKLLDEYLKKTPNSICGGVGRGLVIGFEFEGP-VYKFADAAREQGLLILTLGKGLLEEGV 400 (433)
T ss_pred HHHHcCHHHHHHHHHHHHHHHHHHHHHhccCCCceeeeeeeEEEEEEEEeec-hhhhhhhhhhhhHHHHHHhcccccceE
Confidence 9999999999999999999999999998887766655 88999999998653 333333332333444455566677889
Q ss_pred EeccCCCcceEEeCCCcHHHHHHHHHHHHHHHHHhh
Q 011856 440 YFAPSQFEAGFTSLAHSSDDIQHTITAAEKVKMRFL 475 (476)
Q Consensus 440 ~~~~~~~~~~~~~~~~t~e~i~~~~~~l~~~~~~~~ 475 (476)
++.|. ..++..+|+|.++++++++.+++.++-
T Consensus 401 ~i~P~----~~l~~~~~~E~i~~~l~i~~~~l~~~~ 432 (433)
T KOG1401|consen 401 RIAPI----YLLTVEHTPEVIQRLLTILEKVLSALN 432 (433)
T ss_pred EEecc----ccccccCcHHHHHHHHHHHHHHHHHhc
Confidence 98882 234567789999999999999998763
No 16
>PRK05965 hypothetical protein; Provisional
Probab=100.00 E-value=7.6e-67 Score=527.60 Aligned_cols=391 Identities=22% Similarity=0.252 Sum_probs=323.1
Q ss_pred CCeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcCC----CCCCCHHHHHHHHHHHhhCC-CC
Q 011856 81 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTS----FGAPCLLENVLAEMVISAVP-SI 155 (476)
Q Consensus 81 ~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~----~~~~~~~~~~la~~l~~~~~-~~ 155 (476)
.|+++++++|+|+||.|||+||||.+++++.++||+||+|.+|+.+|+++... +++.++...+|+++|++.+| +.
T Consensus 28 ~~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~ 107 (459)
T PRK05965 28 GVTVLASAKGATLTDASGHQLLDAFAGLWCVNVGYGQESIVEAAAEQMRELPYATGYFHFGSEPAIRLAAKLAERAPGSL 107 (459)
T ss_pred CCceEEeeeEeEEEECCCCEEEECcccHHhccCCCCCHHHHHHHHHHHHhcCCcccccccCCHHHHHHHHHHHhhCCCCc
Confidence 37899999999999999999999999999999999999999999999998542 24568888999999999998 67
Q ss_pred CeEEEeCCHHHHHHHHHHHHHhc------cCCceEEEEeCCCCCCchhHHhhcCCCCccCCC-CCCCCCCCCCCCceeec
Q 011856 156 EMVRFVNSGTEACMGVLRLARAF------TGRERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTA 228 (476)
Q Consensus 156 e~v~~~~sGseA~~~al~~ar~~------~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~ 228 (476)
++|+|++||+||++.|+|+||.+ +++.+||.++++|||++..++..++.......+ +..++.........+..
T Consensus 108 ~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (459)
T PRK05965 108 NHVYFTLGGSDAVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRN 187 (459)
T ss_pred CEEEEeCChhHHHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCccccc
Confidence 89999999999999999999988 457899999999999998888877653222111 11111100000001111
Q ss_pred cC-CC--------HHHHHHHHhcCC-CCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccccc
Q 011856 229 PF-ND--------VSALENLFENNK-GEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG 297 (476)
Q Consensus 229 ~~-~d--------~~~le~~l~~~~-~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~ 297 (476)
++ +| ++++++.++++. +++++||+||+++++|.+.|+++||++|+++|++||++||+|||+||| |+|.+
T Consensus 188 ~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~ 267 (459)
T PRK05965 188 PVGDDPQAIIAASVAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGPL 267 (459)
T ss_pred ccCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCchh
Confidence 11 23 367888887543 689999999999999999999999999999999999999999999999 99999
Q ss_pred chhhccCCCCchhhhhhhcCCC-CcEEEEEecHHHHHhhcCC----CCccccCCCCCcHHHHHHHHHHHHHhcCCCHHHH
Q 011856 298 GAQEYFGVTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAPA----GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEY 372 (476)
Q Consensus 298 ~~~~~~g~~pDi~t~sK~lg~G-~~iG~~~~~~~i~~~l~~~----~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~ 372 (476)
|+++++|+.|||+|+||+++|| +|+|++++++++++.+... ..+.|++||++||++|++++++|++++++++.++
T Consensus 268 ~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~l~~~~l~~~ 347 (459)
T PRK05965 268 FACEAEGVVPDLMTVAKGLTSGYVPMGAVLMSDHVYQGIADGAGAAAPVGHGYTYSAHPVSAAVGLEVLRLYHEGGLLAN 347 (459)
T ss_pred hhHhhcCCCCCeEEechhhccCCcceeEEEEcHHHHHHHhccccccccccccCCCCCCHHHHHHHHHHHHHHHhccHHHH
Confidence 9999999999999999999999 4999999999999988532 1346889999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCCcceEE-
Q 011856 373 LNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT- 451 (476)
Q Consensus 373 ~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~- 451 (476)
+++++++|+++|+++. +++.+.++++.|+|++++|..+....- ...++......+.+.++++||++.+.+...+++
T Consensus 348 ~~~~g~~l~~~l~~l~-~~~~v~~vrG~Gl~~gie~~~~~~~~~--~~~~~~~~~~~i~~~~~~~Gll~~~~g~~~i~~~ 424 (459)
T PRK05965 348 GQKAGPRFAAGLDALR-AHPLVGDVRGRGLLGALELVADKATKT--PFDAALDPADRIFDRAYANGLVFRAFGDGVLGFA 424 (459)
T ss_pred HHHHHHHHHHHHHhhc-cCCCEEEEeecceEEEEEEeccccccC--CCCchhHHHHHHHHHHHhCCeEEEecCCcEEEEE
Confidence 9999999999999985 588899999999999999975321100 000112345678899999999998876444544
Q ss_pred -eCCCcHHHHHHHHHHHHHHHHHh
Q 011856 452 -SLAHSSDDIQHTITAAEKVKMRF 474 (476)
Q Consensus 452 -~~~~t~e~i~~~~~~l~~~~~~~ 474 (476)
++++|++||++++++|+++++++
T Consensus 425 PpL~it~~ei~~~~~~l~~~l~~~ 448 (459)
T PRK05965 425 PALCCTEGEFDLIFERTRKTLDDV 448 (459)
T ss_pred CCCcCCHHHHHHHHHHHHHHHHHH
Confidence 79999999999999999999865
No 17
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=4.2e-67 Score=527.68 Aligned_cols=374 Identities=26% Similarity=0.373 Sum_probs=328.3
Q ss_pred CCCeEEEeecC-CEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcCCC--CCCCHHHHHHHHHHHhhCC-CC
Q 011856 80 GQPIVFDSVKG-SHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSF--GAPCLLENVLAEMVISAVP-SI 155 (476)
Q Consensus 80 ~~p~~~~~~~G-~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~--~~~~~~~~~la~~l~~~~~-~~ 155 (476)
.+|+++.+++| +|+||.|||+||||.+++++.++||+||+|.+|+.+|++++..+ +++++...+|+++|++..| +.
T Consensus 62 ~~~~~~~~~~G~~~l~D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~l~~~~~~~~~~~~~~lae~L~~~~p~~~ 141 (459)
T PRK11522 62 DYGAVEWQAGGLNTLVDTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHSQELLDPLRAMLAKTLAALTPGKL 141 (459)
T ss_pred CCCeeEEeccCeEEEEECCCCEEEECCcCHHhhhcCCCCHHHHHHHHHHHhhCcccccccCCHHHHHHHHHHHHhCCCCC
Confidence 45889999999 99999999999999999999999999999999999999986433 3568889999999999998 47
Q ss_pred CeEEEeCCHHHHHHHHHHHHHhccC---CceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCC
Q 011856 156 EMVRFVNSGTEACMGVLRLARAFTG---RERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFND 232 (476)
Q Consensus 156 e~v~~~~sGseA~~~al~~ar~~~~---~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 232 (476)
++++|+|||+||++.|+|+||.+++ +.+||.++++|||++.+++..++......+ ..+.. ..+..+|++|
T Consensus 142 ~~v~f~~SGsEAve~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~--~~~~~-----~~~~~~~~~d 214 (459)
T PRK11522 142 KYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKP--FMPLL-----PGFRHVPFGN 214 (459)
T ss_pred CEEEEeCCchHHHHHHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccC--CCCCC-----CCCcccCCCC
Confidence 8999999999999999999999985 678999999999999999988776433211 11111 2466789999
Q ss_pred HHHHHHHHhc---CCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccchhhccCCCCc
Q 011856 233 VSALENLFEN---NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPD 308 (476)
Q Consensus 233 ~~~le~~l~~---~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pD 308 (476)
.+++++.+++ +++++++||+||+++++|.+.|+++||++|+++|++||++||+||||+|| |+|.+|+++++|+.||
T Consensus 215 ~~~l~~~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PD 294 (459)
T PRK11522 215 IEAMRTALSECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGKMFACEHENVQPD 294 (459)
T ss_pred HHHHHHHHHHhhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccchhhhhhccCCCCC
Confidence 9999998863 34579999999999999999999999999999999999999999999999 9999999999999999
Q ss_pred hhhhhhhcCCC-CcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Q 011856 309 LTTLGKIIGGG-LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDA 387 (476)
Q Consensus 309 i~t~sK~lg~G-~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~ 387 (476)
++|+||++|+| +|+|++++++++++.+.. .+..+++||++||++|++++++|+.++++++.+++++++++|+++|+++
T Consensus 295 ivt~gK~lggG~~Pigav~~~~~i~~~~~~-~~~~~~~T~~gnp~~~Aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l 373 (459)
T PRK11522 295 ILCLAKALGGGVMPIGATIATEEVFSVLFD-NPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDYLLDGFRQL 373 (459)
T ss_pred EEEechhhhCCCccceeEEEcHHHHHHhcc-CCcccCCCCCCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Confidence 99999999999 699999999999987752 2456889999999999999999999998899999999999999999999
Q ss_pred hhhcC-CceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCC--CcceE--EeCCCcHHHHHH
Q 011856 388 GKKAG-HAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ--FEAGF--TSLAHSSDDIQH 462 (476)
Q Consensus 388 ~~~~~-~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~--~~~~~--~~~~~t~e~i~~ 462 (476)
..+++ .+.++++.|+|+++++.++ +....+.+.|+++||++.+.. ...++ +++.+|++|+|+
T Consensus 374 ~~~~~~~i~~VrG~Gl~~giel~~~-------------~~~~~i~~~l~~~Gvl~~~~~~~~~~lr~~Ppl~~t~~~id~ 440 (459)
T PRK11522 374 AREYPDLVQEARGKGMLMAIEFVDN-------------EIGYNFASEMFRQRVLVAGTLNNAKTIRIEPPLTLTIEQCEQ 440 (459)
T ss_pred HHhCCCceeeEEeceeEEEEEecCc-------------hHHHHHHHHHHHCCeEEEecCCCCCEEEEECCccCCHHHHHH
Confidence 88887 7889999999999999642 224578899999999997653 23444 478999999999
Q ss_pred HHHHHHHHHHHh
Q 011856 463 TITAAEKVKMRF 474 (476)
Q Consensus 463 ~~~~l~~~~~~~ 474 (476)
++++|+++++++
T Consensus 441 ~l~~l~~~l~~~ 452 (459)
T PRK11522 441 VLKAARKALAAM 452 (459)
T ss_pred HHHHHHHHHHHH
Confidence 999999998765
No 18
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=9.2e-67 Score=526.86 Aligned_cols=402 Identities=25% Similarity=0.366 Sum_probs=333.5
Q ss_pred CChhHHHHHHHHhhhCCCCCCCccccccccCCCCeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHH
Q 011856 49 TLKKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETM 128 (476)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l 128 (476)
+.+++.+++++..++++.++.++ +|+++.+++|+|+||.|||+||||.+++++.++||+||+|.+|+.+|+
T Consensus 15 ~~~~s~~~~~~~~~~~~~~~~~~---------~p~~i~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~ 85 (443)
T PRK06058 15 PGPKSQALAERRAAAVAAGVGST---------LPVYVARAGGGIVEDVDGNRLIDLGSGIAVTSVGNSAPRVVEAVREQV 85 (443)
T ss_pred CCccHHHHHHHHHHhhccccccC---------CCceEEeeeeeEEEeCCCCEEEEcCcchhhhccCCCCHHHHHHHHHHH
Confidence 34567788888888887765432 389999999999999999999999999999999999999999999999
Q ss_pred HhcCCC---CCCCHHHHHHHHHHHhhCCC--CCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcC
Q 011856 129 KKGTSF---GAPCLLENVLAEMVISAVPS--IEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAG 203 (476)
Q Consensus 129 ~~~~~~---~~~~~~~~~la~~l~~~~~~--~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g 203 (476)
+++.++ ..+++...+|+++|++.+|+ .++++|++||+||++.|+|+||.++++++||.++++|||++.+++..++
T Consensus 86 ~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~ 165 (443)
T PRK06058 86 ARFTHTCFMVTPYEGYVAVAEQLNRLTPGDHEKRSALFNSGAEAVENAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTA 165 (443)
T ss_pred HhccCccccccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcC
Confidence 985422 24678889999999999974 3799999999999999999999999999999999999999999998776
Q ss_pred CCC-ccCCC-CCCCCCCCCCCCceeeccCCC---------------HHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCH
Q 011856 204 SGV-ATLGL-PDSPGVPKGATYETLTAPFND---------------VSALENLFENNKGEIAAIILEPVVGNSGFIAPKP 266 (476)
Q Consensus 204 ~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~d---------------~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~ 266 (476)
... ....+ |..+++.. ..+..++++ ++.+++.+ .++++++||+||+++++|.+.|++
T Consensus 166 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~iAavi~EPi~g~gG~~~p~~ 239 (443)
T PRK06058 166 KSMPYKSGFGPFAPEVYR----APMSYPYRDPKGLATDGEEAAARAITVIEKQV--GADNLAAVIIEPIQGEGGFIVPAE 239 (443)
T ss_pred CCcccccccCCCCCCceE----cCCCcccccccccccchHHHHHHHHHHHHHhh--CCCceEEEEECCccCCCCCcCCCH
Confidence 421 11111 11111100 001122222 12223332 235899999999999999999999
Q ss_pred HHHHHHHHHHHHhCCEEEEeccccCc-cccccchhhccCCCCchhhhhhhcCCCCcEEEEEecHHHHHhhcCCCCccccC
Q 011856 267 DFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAG 345 (476)
Q Consensus 267 ~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pDi~t~sK~lg~G~~iG~~~~~~~i~~~l~~~~~~~~~~ 345 (476)
+||++|+++|++||++||+||||+|| |+|.+|+++++|+.||++|+||++++|+|+|++++++++++.+. ...+.+
T Consensus 240 ~yl~~lr~lc~~~gillI~DEV~tGfgRtG~~fa~~~~gv~PDiv~~gK~l~~G~Pi~av~~~~~i~~~~~---~~~~~~ 316 (443)
T PRK06058 240 GFLPALLEWCRENGVVFIADEVQTGFARTGAWFACEHEGIVPDLITTAKGIAGGLPLSAVTGRAEIMDAPH---PGGLGG 316 (443)
T ss_pred HHHHHHHHHHHHcCCEEEEeccccCCCcChhhhHHHhcCCCCCEEEEcccccCCCccEEEEEcHHHHhhcc---CCCCCC
Confidence 99999999999999999999999999 99999999999999999999999999999999999999999886 345788
Q ss_pred CCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchH
Q 011856 346 TLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETT 425 (476)
Q Consensus 346 t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~ 425 (476)
||++||++|+|++++|+.++++++.+++++++++++++|+++..+++++.++++.|+|+++++.++.. ..++..
T Consensus 317 T~~gnpl~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G~~~~i~~~~~~~------~~~~~~ 390 (443)
T PRK06058 317 TYGGNPVACAAALAAIETIEEDDLVARARQIEALMTDRLRALAAEDDRIGDVRGRGAMIAIELVKPGT------TEPDAE 390 (443)
T ss_pred CCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhCCcEEeeeccceEEEEEEecCCC------CCCcHH
Confidence 99999999999999999998899999999999999999999988889999999999999999975421 113444
Q ss_pred HHHHHHHHHHHCCeEeccCCC--cceEE--eCCCcHHHHHHHHHHHHHHHHHh
Q 011856 426 KFARFYRGMLEEGVYFAPSQF--EAGFT--SLAHSSDDIQHTITAAEKVKMRF 474 (476)
Q Consensus 426 ~~~~~~~~l~~~Gv~~~~~~~--~~~~~--~~~~t~e~i~~~~~~l~~~~~~~ 474 (476)
....+.+.|+++||++.+.+. +.+++ ++++|+++||+++++|+++++++
T Consensus 391 ~~~~l~~~~~~~Gv~~~~~~~~~~~lr~~Ppl~~t~~~i~~~~~~l~~~l~~~ 443 (443)
T PRK06058 391 LTKALAAAAHAAGVIVLTCGTYGNVIRLLPPLVIGDELLREGLDVLEAALADL 443 (443)
T ss_pred HHHHHHHHHHHCCeEEeccCCCCCEEEEECCCccCHHHHHHHHHHHHHHHHhC
Confidence 567788999999999987542 34555 79999999999999999998763
No 19
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=6.9e-67 Score=527.39 Aligned_cols=385 Identities=25% Similarity=0.359 Sum_probs=320.8
Q ss_pred CCeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcCC---CCCCCHHHHHHHHHHHhhCCC-C-
Q 011856 81 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTS---FGAPCLLENVLAEMVISAVPS-I- 155 (476)
Q Consensus 81 ~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~---~~~~~~~~~~la~~l~~~~~~-~- 155 (476)
+|+++.+++|+|+||.|||+||||.+++++.++||+||+|.+|+++|+++... .+++++...+|+++|.+..|. .
T Consensus 45 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~ 124 (464)
T PRK06938 45 IPLALKRARGIYVEDVEGRQFIDCLAGAGTLALGHNHPVVIEAIQQVLADELPLHTLDLTTPVKDQFVQDLFASLPEAFA 124 (464)
T ss_pred CCceEEeccccEEEeCCCCEEEEccCCccccccCCCCHHHHHHHHHHHHhhhcccccccCCHHHHHHHHHHHHhCccccc
Confidence 48999999999999999999999999999999999999999999999986321 245788899999999998873 2
Q ss_pred --CeEEEe-CCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCC-CCCCCCCCCCCCceeeccCC
Q 011856 156 --EMVRFV-NSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTAPFN 231 (476)
Q Consensus 156 --e~v~~~-~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 231 (476)
++++|+ |||+||++.|+|+||.++++.+||.++++|||++.+++..++.......+ +..+++ ..+.+|++
T Consensus 125 ~~~~v~f~~~SGSEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~------~~~~~p~~ 198 (464)
T PRK06938 125 REAKIQFCGPTGTDAVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGV------QFLPYPYD 198 (464)
T ss_pred ccceEEEeCCCcHHHHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCc------EEeCCCcc
Confidence 478776 89999999999999999999999999999999999999887653221111 111111 12222222
Q ss_pred ---------------CHHHHHHHHhcC---CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-
Q 011856 232 ---------------DVSALENLFENN---KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF- 292 (476)
Q Consensus 232 ---------------d~~~le~~l~~~---~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~- 292 (476)
+++.+++++++. ++++++||+||+++++|.+.|+++||++|+++|++||++||+|||+|||
T Consensus 199 ~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfG 278 (464)
T PRK06938 199 YRCPFGLGGEAGVRANLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFG 278 (464)
T ss_pred ccccccCchhhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCC
Confidence 267788888743 2479999999999999999999999999999999999999999999999
Q ss_pred cccccchhhccCCCCchhhhhhhcCCCCcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHHHH
Q 011856 293 RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEY 372 (476)
Q Consensus 293 r~g~~~~~~~~g~~pDi~t~sK~lg~G~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~ 372 (476)
|+|.+|+++++|+.|||+|+||+++||+|+|++++++++ +.+. ...|.+||++||++|++++++|+.++++++.++
T Consensus 279 RtG~~~a~e~~gv~PDiv~~gKglggG~PlsAv~~~~~~-~~~~---~~~~~~T~~gnpla~Aaa~a~L~~l~~~~l~~~ 354 (464)
T PRK06938 279 RTGKMFAFEHAGIIPDVVVLSKAIGGSLPLAVVVYREWL-DTWQ---PGAHAGTFRGNQMAMAAGSATLRYIKEHRLAEH 354 (464)
T ss_pred cCcHHHHHHhcCCCCCEEEeeccccCCCceEEEeehhHh-hccC---CCCCCCCCCcCHHHHHHHHHHHHHHHHhHHHHH
Confidence 999999999999999999999999999999999999885 6554 346889999999999999999999998999999
Q ss_pred HHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCC-cCchhhcccchHHHHHHHHHHHHCCeEeccCC--Ccce
Q 011856 373 LNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPV-YNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ--FEAG 449 (476)
Q Consensus 373 ~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~--~~~~ 449 (476)
+++++++|+++|+++..+++++.+++|.|+|++++|.++.. .++......+......+...|+++|+++.+.+ .+.+
T Consensus 355 ~~~~G~~l~~~L~~l~~~~~~i~~VrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~g~~~~~l 434 (464)
T PRK06938 355 AAAMGERLREHLRQLQRDYPQLGDVRGRGLMLGVEIVDPQGEPDALGHPPANGELASLIQRECLRRGLILELGGRHGSVV 434 (464)
T ss_pred HHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEeccCcccccccccCCccHHHHHHHHHHHHHCCeEEeecCCCCCEE
Confidence 99999999999999988899999999999999999975321 11111111123445678899999999998754 2344
Q ss_pred EE--eCCCcHHHHHHHHHHHHHHHHHhh
Q 011856 450 FT--SLAHSSDDIQHTITAAEKVKMRFL 475 (476)
Q Consensus 450 ~~--~~~~t~e~i~~~~~~l~~~~~~~~ 475 (476)
++ ++++|++|+|+++++|++++.+++
T Consensus 435 ~~~Ppl~it~~eid~~~~~l~~~l~~~~ 462 (464)
T PRK06938 435 RFLPPLIITAEQIDEVAEIFAEAVAAAV 462 (464)
T ss_pred EEECCCccCHHHHHHHHHHHHHHHHHHh
Confidence 43 899999999999999999998753
No 20
>PRK07481 hypothetical protein; Provisional
Probab=100.00 E-value=6.5e-67 Score=527.26 Aligned_cols=392 Identities=25% Similarity=0.306 Sum_probs=329.7
Q ss_pred CCeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcCCC----CCCCHHHHHHHHHHHhhCC--C
Q 011856 81 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSF----GAPCLLENVLAEMVISAVP--S 154 (476)
Q Consensus 81 ~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~----~~~~~~~~~la~~l~~~~~--~ 154 (476)
.|+++++++|+|+||.|||+||||.++++++++||+||+|.+|+.+|++++.+. +..++...+|+++|++.+| +
T Consensus 24 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~~lae~L~~~~~~~~ 103 (449)
T PRK07481 24 PPIIIVRGDGVYVYDIDGKKLLDGVGGLWNVNVGHNREEVKEAIVRQLDELEYYSTFDGTTHPRAIELSYELIDMFAPEG 103 (449)
T ss_pred CCceEEeccccEEEeCCCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhccceecccccCCHHHHHHHHHHHHhcCCCC
Confidence 489999999999999999999999999999999999999999999999985432 4678999999999999984 5
Q ss_pred CCeEEEeCCHHHHHHHHHHHHHhcc------CCceEEEEeCCCCCCchhHHhhcCCCCccCCC-CCCCCCCCCCCCceee
Q 011856 155 IEMVRFVNSGTEACMGVLRLARAFT------GRERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLT 227 (476)
Q Consensus 155 ~e~v~~~~sGseA~~~al~~ar~~~------~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~ 227 (476)
.++++|++||+||++.|+|+||.++ ++.+||.++++|||++.+++..++.......+ |..+++.....+..+.
T Consensus 104 ~~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 183 (449)
T PRK07481 104 MRRVFFSSGGSDSVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYR 183 (449)
T ss_pred CCEEEEcCchHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCcccc
Confidence 6899999999999999999999985 67899999999999999998877654322111 2233443333334455
Q ss_pred ccCC--CHHHH--------HHHHh-cCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccc
Q 011856 228 APFN--DVSAL--------ENLFE-NNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLA 295 (476)
Q Consensus 228 ~~~~--d~~~l--------e~~l~-~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g 295 (476)
+|+| |.+.+ |+++. ++++++++||+||+++++|.+.|+++||++|+++|++||++||+|||+||| |+|
T Consensus 184 ~~~~~~d~~~~~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG 263 (449)
T PRK07481 184 NPFTEQDPEELARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTG 263 (449)
T ss_pred cccCCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCc
Confidence 5666 55443 44444 345789999999999999999999999999999999999999999999999 999
Q ss_pred ccchhhccCCCCchhhhhhhcCCC-CcEEEEEecHHHHHhhcCC----CCccccCCCCCcHHHHHHHHHHHHHhcCCCHH
Q 011856 296 YGGAQEYFGVTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAPA----GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTY 370 (476)
Q Consensus 296 ~~~~~~~~g~~pDi~t~sK~lg~G-~~iG~~~~~~~i~~~l~~~----~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~ 370 (476)
.+|+++++|+.|||+|+||++++| +|+|++++++++++.+... +...|++||++||++|++++++|+.++++++.
T Consensus 264 ~~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~l~~~~l~ 343 (449)
T PRK07481 264 SWFGSRGWGVKPDIMCLAKGITSGYVPLGATMVNARIADAFEANADFGGAIMHGYTYSGHPVACAAALATLDIVVREDLP 343 (449)
T ss_pred hhhHhhhcCCCCCEEEEeecccCCCcCceEEEEcHHHHHHHhccCccccccccCCCCCCCHHHHHHHHHHHHHHHhhhHH
Confidence 999999999999999999999999 5999999999999988632 23468899999999999999999999989999
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCC-cCchhhcccchHHHHHHHHHHHHCCeEeccCCCcce
Q 011856 371 EYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPV-YNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAG 449 (476)
Q Consensus 371 ~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~ 449 (476)
+++++++++|+++|+++..+++++.++++.|+|++++|..+.. .+. ..+.......+...|+++||++.+.+. .+
T Consensus 344 ~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Glm~gi~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~Gvl~~~~g~-~i 419 (449)
T PRK07481 344 ANAAKRGAYLLEGLQPLKERFELVGDVRGKGLMLALDLVADKATREP---IDPSKGYANAVADVARENGVLVRPSGT-KI 419 (449)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCeEEEeecceEEEEEecccccccCC---CCchhHHHHHHHHHHHhCCeEEEecCC-EE
Confidence 9999999999999999988889999999999999999964321 110 001123456788899999999988653 34
Q ss_pred EE--eCCCcHHHHHHHHHHHHHHHHHhhC
Q 011856 450 FT--SLAHSSDDIQHTITAAEKVKMRFLF 476 (476)
Q Consensus 450 ~~--~~~~t~e~i~~~~~~l~~~~~~~~~ 476 (476)
++ ++++|++|||+++++|+++++++.|
T Consensus 420 ~l~Ppl~it~~eid~~~~~l~~~l~~~~~ 448 (449)
T PRK07481 420 ILSPPLVIQREDVDRIVDALDAGLSAVPF 448 (449)
T ss_pred EEECCCCCCHHHHHHHHHHHHHHHHhccC
Confidence 44 5889999999999999999998765
No 21
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=1e-66 Score=526.04 Aligned_cols=391 Identities=26% Similarity=0.391 Sum_probs=321.8
Q ss_pred CCeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcCC---CCCCCHHHHHHHHHHHhhCCCCC-
Q 011856 81 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTS---FGAPCLLENVLAEMVISAVPSIE- 156 (476)
Q Consensus 81 ~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~---~~~~~~~~~~la~~l~~~~~~~e- 156 (476)
+|+++.+++|+|+||.|||+||||.+++++.++||+||+|.+|+.+|++++.. ..++++...+|+++|.+.+|+.+
T Consensus 40 ~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~ 119 (459)
T PRK06931 40 LPLAIAKAQGVWVTDVEGNQYLDCLAGAGTLALGHNHPDVLQSIQDVLTSGLPLHTLDLTTPLKDAFSEYLLSLLPGQGK 119 (459)
T ss_pred CCceEEeccccEEEeCCCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhhccccccccCCHHHHHHHHHHHHhCCCccc
Confidence 58999999999999999999999999999999999999999999999987432 23578889999999999997432
Q ss_pred --eE-EEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCC-CCCCCCCCCCCCceeeccCC-
Q 011856 157 --MV-RFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTAPFN- 231 (476)
Q Consensus 157 --~v-~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~- 231 (476)
++ +|+|||+||++.|+|+||.+++|.+||.++++|||++.+++..++.......+ |..+++......+.+.+|++
T Consensus 120 ~~~~~f~~~SGsEAve~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (459)
T PRK06931 120 EYCLQFTGPSGADAVEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGI 199 (459)
T ss_pred cceEEEeCCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccccccC
Confidence 34 56699999999999999999999999999999999999999877653222111 22233322222334444444
Q ss_pred ----CHHHH----HHHHhc---CCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccch
Q 011856 232 ----DVSAL----ENLFEN---NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGA 299 (476)
Q Consensus 232 ----d~~~l----e~~l~~---~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~ 299 (476)
+.+.+ ++.+.+ .++++++||+||+++++|.+.|+++||++|+++|++||++||+|||+||| |+|.+|+
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~~~a 279 (459)
T PRK06931 200 GGEAGVKALTYYFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTGKMFA 279 (459)
T ss_pred CchhHHHHHHHHHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCchHHH
Confidence 23333 344432 34579999999999999999999999999999999999999999999999 9999999
Q ss_pred hhccCCCCchhhhhhhcCCCCcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Q 011856 300 QEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGE 379 (476)
Q Consensus 300 ~~~~g~~pDi~t~sK~lg~G~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~ 379 (476)
++++|+.|||+|+||++++|+|+|++++++++ +.+. +..+++||++||++|++++++|+.++++++.+++++++++
T Consensus 280 ~~~~gv~PDivt~gK~l~gG~Pi~av~~~~~~-~~~~---~~~~~~T~~gnpla~aaala~L~~l~~~~l~~~~~~~G~~ 355 (459)
T PRK06931 280 FEHAGIEPDIIVMSKAVGGGLPLAVLGIKKEF-DAWQ---PGGHTGTFRGNQLAMATGLTTLKILKEENLAQNAAERGEW 355 (459)
T ss_pred hhhcCCCCCEEEecccccCCcceeeeeeHHHH-hhcc---CCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 99999999999999999999999999888774 6664 3568899999999999999999999989999999999999
Q ss_pred HHHHHHHHhhhcCCceEeeeeceeEEEEEecCC-CcCchhhcccchHHHHHHHHHHHHCCeEeccCCC--cceE--EeCC
Q 011856 380 LTQGIIDAGKKAGHAICGGYISGMFGFFFTEGP-VYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF--EAGF--TSLA 454 (476)
Q Consensus 380 l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~--~~~~--~~~~ 454 (476)
|+++|+++..+++.+.+++|.|+|+++++.++. ..++......+......+...|+++|+++.+.+. +.++ ++++
T Consensus 356 l~~~L~~l~~~~~~i~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~~l~~~Ppl~ 435 (459)
T PRK06931 356 LKAQLAELQKRYPCIGNVRGRGLMIGIEIVDERQPADAMGSYPADGELAAAIQKACFENGLLLERGGRNGNVVRLLPPLL 435 (459)
T ss_pred HHHHHHHHHHhCCCeEeEecCceEEEEEEccCcccccccccCCccHHHHHHHHHHHHHCCcEEeecCCCCCEEEEECCCC
Confidence 999999998889999999999999999997532 1111111112334556788999999999976542 3344 4899
Q ss_pred CcHHHHHHHHHHHHHHHHHhh
Q 011856 455 HSSDDIQHTITAAEKVKMRFL 475 (476)
Q Consensus 455 ~t~e~i~~~~~~l~~~~~~~~ 475 (476)
+|++|+|+++++|++++.+++
T Consensus 436 it~~eid~~~~~l~~~l~~~~ 456 (459)
T PRK06931 436 ITQAECEEFIDRFEQALLAAV 456 (459)
T ss_pred cCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998765
No 22
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=7.3e-66 Score=518.98 Aligned_cols=397 Identities=22% Similarity=0.306 Sum_probs=331.7
Q ss_pred hhHHHHHHHHhhhCCCCCCCccccccccCCCCeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHh
Q 011856 51 KKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKK 130 (476)
Q Consensus 51 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~ 130 (476)
+++.+++++++++++.+.... .+|+++++++|+|+||.|||+||||.+++++.++||+||+|.+|+++|+++
T Consensus 13 ~~s~~~~~~~~~~~~~~~~~~--------~~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~ql~~ 84 (457)
T PRK05639 13 PKAKELIEREKRVLSPGIGVK--------LFPLVPKRGFGALIEDVDGNVFIDFLAGAAAASTGYSHPKLVKAVQEQVAL 84 (457)
T ss_pred CCHHHHHHHHHHhhccccCcC--------CCCceEEeeecCEEEeCCCCEEEECCcCHHhhccCCCCHHHHHHHHHHHHh
Confidence 456778888888877664211 138999999999999999999999999999999999999999999999998
Q ss_pred cCC--CC-CCCHHHHHHHHHHHhhCCC-CCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCC
Q 011856 131 GTS--FG-APCLLENVLAEMVISAVPS-IEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGV 206 (476)
Q Consensus 131 ~~~--~~-~~~~~~~~la~~l~~~~~~-~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~ 206 (476)
... .. .+++...+|+++|++..|. .++|+|+|||+||++.|+|+||.++++.+||.++++|||++.+++..++...
T Consensus 85 ~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~ 164 (457)
T PRK05639 85 IQHSMIGYTHSERAIRVAEKLAEISPIENPKVLFGLSGSDAVDMAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQS 164 (457)
T ss_pred ccccccCccCCHHHHHHHHHHHhhCCCCcCEEEEeCchHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCc
Confidence 532 22 3467888999999999884 5899999999999999999999999999999999999999999988766421
Q ss_pred -ccCCC-CCCCCCCCCCCCceeeccCC-------------CH--------HHHHHHHhc---CCCCeEEEEEcccCCCCC
Q 011856 207 -ATLGL-PDSPGVPKGATYETLTAPFN-------------DV--------SALENLFEN---NKGEIAAIILEPVVGNSG 260 (476)
Q Consensus 207 -~~~~~-~~~~~~~~~~~~~~~~~~~~-------------d~--------~~le~~l~~---~~~~~a~vi~ep~~~~~G 260 (476)
....+ |..+ ++..+|++ |. +.+++.+.. .++++++||+||+++++|
T Consensus 165 ~~~~~~~~~~~--------~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG 236 (457)
T PRK05639 165 SQKRGFSPLMP--------NVVWIPYPNPYRNPWGINGYEEPDELINRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAG 236 (457)
T ss_pred ccccCCCCCCC--------CceEeCCCccccccccccccCCHHHHHHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCC
Confidence 11111 1111 12333332 22 245555432 356899999999999999
Q ss_pred cccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccchhhccCCCCchhhhhhhcCCCCcEEEEEecHHHHHhhcCCC
Q 011856 261 FIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAG 339 (476)
Q Consensus 261 ~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pDi~t~sK~lg~G~~iG~~~~~~~i~~~l~~~~ 339 (476)
.+.|+++||++|+++|++||++||+||||+|| |+|.+|+++++|+.||++|+||++++|+|+|++++++++++...
T Consensus 237 ~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDiv~~gK~l~gG~pi~av~~~~~i~~~~~--- 313 (457)
T PRK05639 237 IVVPPENFFKELKKLLDEHGILLVMDEVQTGIGRTGKWFASEWFEVKPDLIIFGKGVASGMGLSGVIGRKELMDLTS--- 313 (457)
T ss_pred CcCCCHHHHHHHHHHHHHcCCEEEEechhhccCcCchHHHHHhcCCCCCEEEechhhcCCCcceeEEehHHHHhhcC---
Confidence 99999999999999999999999999999999 99999999999999999999999999999999999999998322
Q ss_pred CccccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhh
Q 011856 340 PMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDA 419 (476)
Q Consensus 340 ~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~ 419 (476)
..+.+|+++||++|++++++|+.++++++.+++++++++|+++|+++..+++++.+++|.|+|+++++..+..
T Consensus 314 -~~~~~T~~g~p~~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~VrG~Gl~~gve~~~~~~------ 386 (457)
T PRK05639 314 -GSALLTPAANPVISAAAEATLEIIEEENLLKNALKVGEFIKKRLLEMKESFEVIGDVRGKGLMIGVEIVKENG------ 386 (457)
T ss_pred -CCcccCCCcCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHhCCCEEeeccceeEEEEEEecCCC------
Confidence 2355799999999999999999999899999999999999999999988899999999999999999964321
Q ss_pred cccchHHHHHHHHHHHHCCeEeccCCC--cceEE--eCCCcHHHHHHHHHHHHHHHHHh
Q 011856 420 KKSETTKFARFYRGMLEEGVYFAPSQF--EAGFT--SLAHSSDDIQHTITAAEKVKMRF 474 (476)
Q Consensus 420 ~~~~~~~~~~~~~~l~~~Gv~~~~~~~--~~~~~--~~~~t~e~i~~~~~~l~~~~~~~ 474 (476)
.++......+.+.|+++|+++.+.+. +.+++ ++.+|++|+|+++++|+++++++
T Consensus 387 -~~~~~~~~~~~~~~~~~Gv~~~~~g~~~~~lr~~Ppl~it~~~id~~~~~l~~~l~~~ 444 (457)
T PRK05639 387 -KPDPELTGKICWRAFELGLILPSYGMFGNVIRITPPLVITKEIAEKGLEIMERAIKDA 444 (457)
T ss_pred -CCCHHHHHHHHHHHHhCCeEEeecCCCCCEEEEeCCCccCHHHHHHHHHHHHHHHHHH
Confidence 13344557888999999999987642 44554 79999999999999999998765
No 23
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=100.00 E-value=2.1e-66 Score=518.85 Aligned_cols=368 Identities=27% Similarity=0.384 Sum_probs=320.9
Q ss_pred CeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcCCC--CCCCHHHHHHHHHHHhhCCC-CCeE
Q 011856 82 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSF--GAPCLLENVLAEMVISAVPS-IEMV 158 (476)
Q Consensus 82 p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~--~~~~~~~~~la~~l~~~~~~-~e~v 158 (476)
++++.+++|+|+||.|||+||||.+++++.++||+||+|.+|+.+|+++.... ...++...+|+|+|++.+|+ .+++
T Consensus 58 ~~~~~~~~g~~l~D~dG~~ylD~~~g~~~~~lGh~hp~v~~Av~~ql~~l~~~~~~~~~~~~~~lAe~L~~~~p~~~~~v 137 (442)
T TIGR03372 58 AVEWQAGGLNTLIDTQGNEFIDCLGGFGIFNVGHRNPNVIAAVENQLAKQPLHSQELLDPLRALLAKTLAALTPGKLKYS 137 (442)
T ss_pred eeEEEeCCeeEEEECCCCEEEECCccHHhhhcCCCCHHHHHHHHHHHHhCCCcccccCCHHHHHHHHHHHHhCCCCcCEE
Confidence 44567777799999999999999999999999999999999999999985433 25688899999999999984 5899
Q ss_pred EEeCCHHHHHHHHHHHHHhcc---CCceEEEEeCCCCCCchhHHhhcCCCCccCCC-CCCCCCCCCCCCceeeccCCCHH
Q 011856 159 RFVNSGTEACMGVLRLARAFT---GRERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTAPFNDVS 234 (476)
Q Consensus 159 ~~~~sGseA~~~al~~ar~~~---~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~ 234 (476)
+|+|||+||++.|+|+||.++ ++.+||.++++|||++.+++..++.......+ |. ...+..+|++|.+
T Consensus 138 ~f~~SGsEA~e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~--------~~~~~~~p~~d~~ 209 (442)
T TIGR03372 138 FFCNSGTESVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPL--------LPGFHHVAFGDIE 209 (442)
T ss_pred EEeCCchHHHHHHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCC--------CCCCEEeCCCCHH
Confidence 999999999999999999996 78899999999999999999887753221111 11 1236778999999
Q ss_pred HHHHHHhc---CCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccchhhccCCCCchh
Q 011856 235 ALENLFEN---NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLT 310 (476)
Q Consensus 235 ~le~~l~~---~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pDi~ 310 (476)
.+++.+++ +++++++||+||+++++|.+.|+++||++|+++|++||+++|+||||+|| |+|.+|+++++|+.|||+
T Consensus 210 ~~~~~l~~~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PDiv 289 (442)
T TIGR03372 210 AMLKALNECKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTGKMFACEHEGVQPDIL 289 (442)
T ss_pred HHHHHHHHHhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCccccchhhhhcCCCCCee
Confidence 99888853 45689999999999999999999999999999999999999999999999 999999999999999999
Q ss_pred hhhhhcCCC-CcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhh
Q 011856 311 TLGKIIGGG-LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGK 389 (476)
Q Consensus 311 t~sK~lg~G-~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 389 (476)
|+||++++| +|+|++++++++++.+.. .+..+++||++||++|++++++|+.++++++.+++++++++++++|+++..
T Consensus 290 t~gK~lg~G~~Pigavv~~~~i~~~~~~-~~~~~~~T~~gnp~~~Aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l~~ 368 (442)
T TIGR03372 290 CLAKALGGGVMPIGATIATEAVFSVLFD-NPFLHTTTFGGNPLACAAALATINELLEKNLPAQAAIKGDFLLDGFQQLAA 368 (442)
T ss_pred eehhhhcCCcccceEEEecHHHHHhhhc-cCccccCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999 699999999999998842 245688999999999999999999999889999999999999999999988
Q ss_pred hcC-CceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCC--cceEE--eCCCcHHHHHHHH
Q 011856 390 KAG-HAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF--EAGFT--SLAHSSDDIQHTI 464 (476)
Q Consensus 390 ~~~-~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~--~~~~~--~~~~t~e~i~~~~ 464 (476)
+++ .+.+++|.|+|++++|.++ .....+.+.|+++||++.+.+. +.+++ ++.+|++|+|+++
T Consensus 369 ~~~~~i~~vRG~Gl~~giel~~~-------------~~~~~i~~~l~~~Gvl~~~~~~~~~~lr~~Ppl~~t~~~id~~~ 435 (442)
T TIGR03372 369 EYPDLIIEARGKGLLMAIEFRDN-------------EIGYAFAKELFQQNILVAGTLNNAKSIRIEPPLTITIEQCALVI 435 (442)
T ss_pred hCCCceEEEecceEEEEEEeCCh-------------HHHHHHHHHHHHCCcEEeecCCCCCEEEEECCcccCHHHHHHHH
Confidence 887 7789999999999999642 2336788999999999976532 34554 7999999999999
Q ss_pred HHHHHHH
Q 011856 465 TAAEKVK 471 (476)
Q Consensus 465 ~~l~~~~ 471 (476)
++|++++
T Consensus 436 ~~l~~~~ 442 (442)
T TIGR03372 436 KAAKDAL 442 (442)
T ss_pred HHHHHhC
Confidence 9999864
No 24
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=8.8e-66 Score=520.02 Aligned_cols=416 Identities=23% Similarity=0.298 Sum_probs=336.0
Q ss_pred HHHHHHHHhhhCCCCCCCccccccccCCCCeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcC
Q 011856 53 SEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT 132 (476)
Q Consensus 53 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~ 132 (476)
+.++.++.+++++.+.... +.+. ...|+++.+++|+|+||.|||+||||.+++++.++||+||+|.+|+.+|+++..
T Consensus 13 ~~~~~~~~~~~~~~~~~~~-~~~~--~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~ 89 (460)
T PRK06916 13 YEELSEKNKAYVWHPFTQM-KDYL--EEDPLIIERGEGRKLYDVNGNEYYDGVSSIWLNVHGHQVPELDEAIREQLNKIA 89 (460)
T ss_pred hHHHHHHHhhccccccccc-cccc--cCCCeeEEeccccEEEeCCCCEEEEcchhHHHhhcCCCCHHHHHHHHHHHHhCC
Confidence 4567777777765543321 1111 124899999999999999999999999999999999999999999999999843
Q ss_pred ---CCCCCCHHHHHHHHHHHhhCCC-CCeEEEeCCHHHHHHHHHHHHHhc------cCCceEEEEeCCCCCCchhHHhhc
Q 011856 133 ---SFGAPCLLENVLAEMVISAVPS-IEMVRFVNSGTEACMGVLRLARAF------TGRERIIKFEGCYHGHADPFLVKA 202 (476)
Q Consensus 133 ---~~~~~~~~~~~la~~l~~~~~~-~e~v~~~~sGseA~~~al~~ar~~------~~~~~ii~~~~~yhg~~~~~~~~~ 202 (476)
..++.++...+|+++|++.+|. .++++|+|||+||++.|+|+||.+ +++.+||.++++|||++.+++..+
T Consensus 90 ~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGseAve~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s 169 (460)
T PRK06916 90 HSTLLGLANVPSILLAEKLIEVVPEGLKKVFYSDSGATAVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVG 169 (460)
T ss_pred CccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhcc
Confidence 2356788899999999999984 689999999999999999999984 678999999999999999999887
Q ss_pred CCCCccCCC-CCCCCCCCCCCCceeeccC---------CCHHHHHHHHhcCCCCeEEEEEcc-cCCCCCcccCCHHHHHH
Q 011856 203 GSGVATLGL-PDSPGVPKGATYETLTAPF---------NDVSALENLFENNKGEIAAIILEP-VVGNSGFIAPKPDFLNA 271 (476)
Q Consensus 203 g~~~~~~~~-~~~~~~~~~~~~~~~~~~~---------~d~~~le~~l~~~~~~~a~vi~ep-~~~~~G~i~~~~~~l~~ 271 (476)
+.......+ |...++......+.+..+. ++++.+++.++++++++++||+|| +++++|.+.|+++||++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~ 249 (460)
T PRK06916 170 AIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKG 249 (460)
T ss_pred CCcccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHH
Confidence 753322111 1111110000011111111 136778888887778999999999 69999999999999999
Q ss_pred HHHHHHHhCCEEEEeccccCc-cccccchhhccCCCCchhhhhhhcCCC-CcEEEEEecHHHHHhhcCC----CCccccC
Q 011856 272 IRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAPA----GPMYQAG 345 (476)
Q Consensus 272 l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pDi~t~sK~lg~G-~~iG~~~~~~~i~~~l~~~----~~~~~~~ 345 (476)
|+++|++||++||+|||+||| |+|.+|+++++|+.|||+|+||+++|| +|+|++++++++++.+... ....|.+
T Consensus 250 lr~lc~~~g~llI~DEV~TG~GRtG~~~a~~~~gv~PDiv~~gK~l~gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~~~~ 329 (460)
T PRK06916 250 LRNLCTKYNVLFITDEVATGFGRTGKMFACEHENVTPDIMTAGKGLTGGYLPIAITVTTDEIYNAFYGDYEEQKTFFHGH 329 (460)
T ss_pred HHHHHHHcCCEEEeechhhCCCcCchhhHHHhcCCCCCeeeeehhhhcCccccceeeecHHHHHHhhccccccCccccCC
Confidence 999999999999999999999 999999999999999999999999999 5999999999999877531 2356888
Q ss_pred CCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchH
Q 011856 346 TLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETT 425 (476)
Q Consensus 346 t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~ 425 (476)
||++||++|++++++|+.+++++++++++++++++++.|+++.. ++.+.++++.|+|++++|.++... ......+..
T Consensus 330 T~~gnpl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~l~~l~~-~~~v~~vrG~Glm~giel~~~~~~--~~~~~~~~~ 406 (460)
T PRK06916 330 SYTGNPLGCAVALANLELYEKTNLIEQVARKTEYVATQLEDLFA-LKHVGDIRQLGLMVGIELVKNKET--KEPFEWTER 406 (460)
T ss_pred CCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhc-CCCeEEeecCCceeeEEeeccccc--ccCCCchhh
Confidence 99999999999999999999899999999999999999999854 788889999999999999754221 000011222
Q ss_pred HHHHHHHHHHHCCeEeccCCCcceE--EeCCCcHHHHHHHHHHHHHHHHHhh
Q 011856 426 KFARFYRGMLEEGVYFAPSQFEAGF--TSLAHSSDDIQHTITAAEKVKMRFL 475 (476)
Q Consensus 426 ~~~~~~~~l~~~Gv~~~~~~~~~~~--~~~~~t~e~i~~~~~~l~~~~~~~~ 475 (476)
....+...|+++||++.+.+ ..++ +++++|++||++++++|+++++++.
T Consensus 407 ~~~~i~~~~~~~Gvl~~~~g-~~l~~~Ppl~it~~~id~~~~~l~~~l~~~~ 457 (460)
T PRK06916 407 VGVQVCKRSRELGMLTRPLG-NTIVFMPPLASTIDELDEMLRILYKAISDVT 457 (460)
T ss_pred HHHHHHHHHHHCCeEEEecC-CEEEEeCCcccCHHHHHHHHHHHHHHHHhhc
Confidence 34678889999999998865 3443 3799999999999999999998753
No 25
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=1.2e-65 Score=517.49 Aligned_cols=384 Identities=22% Similarity=0.284 Sum_probs=322.0
Q ss_pred CCeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcC---CCCCCCHHHHHHHHHHHhhCCC-CC
Q 011856 81 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT---SFGAPCLLENVLAEMVISAVPS-IE 156 (476)
Q Consensus 81 ~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~---~~~~~~~~~~~la~~l~~~~~~-~e 156 (476)
.|+++.+++|+|+||.|||+||||.+++++.++||+||+|.+|+.+|++++. ..+++++...+|+++|++..|. .+
T Consensus 36 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~ 115 (453)
T PRK06943 36 PLLPVARGEGAWLYDRDGRRYLDAISSWWVNLFGHANPRINAALKDQLDTLEHAMLAGCTHEPAIELAERLAALTGGTLG 115 (453)
T ss_pred CCceEEecccCEEEeCCCCEEEEcchHHHHhcCCCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHHhCCCCCC
Confidence 3899999999999999999999999999999999999999999999999853 2356788999999999999874 58
Q ss_pred eEEEeCCHHHHHHHHHHHHHhc------cCCceEEEEeCCCCCCchhHHhhcCCCCccCCC-CCCCCCCCCCCCceeecc
Q 011856 157 MVRFVNSGTEACMGVLRLARAF------TGRERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTAP 229 (476)
Q Consensus 157 ~v~~~~sGseA~~~al~~ar~~------~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~ 229 (476)
+++|++||+||++.|+|+||.+ +++.+||.++++|||++.+++..++.......+ |...++.....++....+
T Consensus 116 ~v~f~~sGseAve~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 195 (453)
T PRK06943 116 HAFFASDGASAVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGAR 195 (453)
T ss_pred EEEEeCCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCccccc
Confidence 9999999999999999999654 578899999999999999999888754322111 111111000000000001
Q ss_pred ---------CCCHHHHHHHHhcCCCCeEEEEEcc-cCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccc
Q 011856 230 ---------FNDVSALENLFENNKGEIAAIILEP-VVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGG 298 (476)
Q Consensus 230 ---------~~d~~~le~~l~~~~~~~a~vi~ep-~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~ 298 (476)
.+++++++++++++++++++||+|| +++++|.+.|+++||++|+++|++||++||+|||+||| |+|.+|
T Consensus 196 ~~~~~~~~~~~~~~~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG~~f 275 (453)
T PRK06943 196 PGETAADVAARALADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTGTFF 275 (453)
T ss_pred cCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCcchh
Confidence 1346888888887778999999999 59999999999999999999999999999999999999 999999
Q ss_pred hhhccCCCCchhhhhhhcCCC-CcEEEEEecHHHHHhhcCC---CCccccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHH
Q 011856 299 AQEYFGVTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAPA---GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLN 374 (476)
Q Consensus 299 ~~~~~g~~pDi~t~sK~lg~G-~~iG~~~~~~~i~~~l~~~---~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~ 374 (476)
+++++|+.|||+|+||+++|| +|+|++++++++++.+... ..+.|.+||++||++|++++++|++++++++.++++
T Consensus 276 a~~~~gv~PDivt~gKgl~gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~~~~l~~~~~ 355 (453)
T PRK06943 276 ACEQAGVWPDFLCLSKGISGGYLPLSLVLSRDAIFAAFYDDDVTRGFLHSHSYTGNPLACRAALATLDLFAEDDVLARNA 355 (453)
T ss_pred HHHhCCCCCCeEeeehhhccCcccceEEEEcHHHHHhhcccCccCCccCCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 999999999999999999999 5999999999999988532 134688999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCCcceEE--e
Q 011856 375 KITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--S 452 (476)
Q Consensus 375 ~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~--~ 452 (476)
+++++|+++|+++. +++.+.++++.|+|++++|..+. .+......++...++++||++.+.+. .+++ +
T Consensus 356 ~~G~~l~~~L~~l~-~~~~v~~vrG~Gl~~gvel~~~~--------~~~~~~~~~i~~~~~~~Gll~~~~g~-~l~~~Pp 425 (453)
T PRK06943 356 RKSARLRAALAPLA-AHPQVRHLRQRGTIFAFDVALDG--------DAARTFSRRFFEAALERELLLRPIGT-TVYLMPP 425 (453)
T ss_pred HHHHHHHHHHHHHh-cCCCEEeEeccccEEEEEEccCC--------CcchHHHHHHHHHHHHCCcEEEecCC-EEEEeCC
Confidence 99999999999984 47777899999999999997431 01223356788999999999987653 4555 6
Q ss_pred CCCcHHHHHHHHHHHHHHHHHh
Q 011856 453 LAHSSDDIQHTITAAEKVKMRF 474 (476)
Q Consensus 453 ~~~t~e~i~~~~~~l~~~~~~~ 474 (476)
+++|++|||+++++|+++++++
T Consensus 426 l~it~~eid~~~~~l~~al~~~ 447 (453)
T PRK06943 426 YVLDDDEIAWLAERTRATLDAT 447 (453)
T ss_pred CcCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999875
No 26
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=1.9e-65 Score=516.82 Aligned_cols=390 Identities=24% Similarity=0.307 Sum_probs=320.6
Q ss_pred CeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcC---CCCCCCHHHHHHHHHHHhhCCC----
Q 011856 82 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT---SFGAPCLLENVLAEMVISAVPS---- 154 (476)
Q Consensus 82 p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~---~~~~~~~~~~~la~~l~~~~~~---- 154 (476)
|+.+.+++|+|+||.|||+||||.+++++.++||+||+|.+|+.+|+++.. ..++.++...+|+++|.+.+|.
T Consensus 47 ~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~l~~~~~~~~~~~~~~~lae~L~~~~p~~~~~ 126 (472)
T PRK08742 47 LVPIARGEGAWLVGHDGRRYLDAVSSWWTNLFGHAEPRIGAAIAAQAGELEQVMLAGFTHEPAVQLAEQLLAIAPRQDGR 126 (472)
T ss_pred CeeEEecccCEEEeCCCCEEEEcCccHHhccCCCCCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCCCcccC
Confidence 578999999999999999999999999999999999999999999998642 2346788899999999999873
Q ss_pred --CCeEEEeCCHHHHHHHHHHHHHhc------cCCceEEEEeCCCCCCchhHHhhcCCCCccCCC-CCCCCCCCCCCCce
Q 011856 155 --IEMVRFVNSGTEACMGVLRLARAF------TGRERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYET 225 (476)
Q Consensus 155 --~e~v~~~~sGseA~~~al~~ar~~------~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~ 225 (476)
.++|+|++||+||++.|+|+||.+ +++.+||.++++|||++.+++..++.......+ |...++......+.
T Consensus 127 ~~~~~v~f~~sGSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~ 206 (472)
T PRK08742 127 APLSKVFYADNGSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDA 206 (472)
T ss_pred CCCCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCCc
Confidence 579999999999999999999988 568899999999999999999887654322111 11111110001111
Q ss_pred eeccCC---------CHHHHHHHHhcCCCCeEEEEEcc-cCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cc
Q 011856 226 LTAPFN---------DVSALENLFENNKGEIAAIILEP-VVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RL 294 (476)
Q Consensus 226 ~~~~~~---------d~~~le~~l~~~~~~~a~vi~ep-~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~ 294 (476)
+..++. +++.+++.++++++++++||+|| +++++|.+.|+++||++|+++|++||++||+|||+||| |+
T Consensus 207 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRt 286 (472)
T PRK08742 207 YLAEPGQSAEDYALQAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRT 286 (472)
T ss_pred cccccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCC
Confidence 111111 35778888876667899999999 69999999999999999999999999999999999999 99
Q ss_pred cccchhhccCCCCchhhhhhhcCCCC-cEEEEEecHHHHHhhcCC---CCccccCCCCCcHHHHHHHHHHHHHhcCCCHH
Q 011856 295 AYGGAQEYFGVTPDLTTLGKIIGGGL-PVGAYGGRRDIMEMVAPA---GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTY 370 (476)
Q Consensus 295 g~~~~~~~~g~~pDi~t~sK~lg~G~-~iG~~~~~~~i~~~l~~~---~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~ 370 (476)
|.+|+++++|+.|||+|+||+++||+ |+|++++++++++.+... +.+.|++||++||++|++++++|++++++++.
T Consensus 287 G~~~a~e~~gv~PDiv~~gKgl~gG~~Plaav~~~~ei~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~i~~~~l~ 366 (472)
T PRK08742 287 GTLFACEQAGVMPDLLCLSKGLTGGFLPLSAVLATQQLYDAFLDDSRERAFLHSHSYTGNPLACAAALATLDIFADDDVI 366 (472)
T ss_pred ccchHHHhcCCCCCEEEEcccccCCCCCcceeeccHHHHHHhhccCccCccCcCCCCCccHHHHHHHHHHHHHHHHCCHH
Confidence 99999999999999999999999995 999999999999987531 23568899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCCcceE
Q 011856 371 EYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGF 450 (476)
Q Consensus 371 ~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~ 450 (476)
+++++++++|++.++.+ .+++.+.++++.|+|++++|..+.... ....++......+.+.++++||++.+.+ +.++
T Consensus 367 ~~~~~~g~~l~~~~~~~-~~~~~i~dvRG~Gl~~giel~~~~~~~--~~~~~~~~~~~~~~~~~~~~Gll~~~~g-~vi~ 442 (472)
T PRK08742 367 ARNQPTAARMTQLAAQI-GEHPHVADVRQAGMVVAFELTRGGNKR--TPFPPAARVGLHAYRAALARGVVLRPLG-DVLY 442 (472)
T ss_pred HHHHHHHHHHHHHHHHH-hcCCCeeeEeccceEEEEEeccCcccc--ccCCchhHHHHHHHHHHHHCCeEEEecC-CEEE
Confidence 99999999999777765 568889999999999999997532110 0000112234667888999999998865 4555
Q ss_pred E--eCCCcHHHHHHHHHHHHHHHHHhh
Q 011856 451 T--SLAHSSDDIQHTITAAEKVKMRFL 475 (476)
Q Consensus 451 ~--~~~~t~e~i~~~~~~l~~~~~~~~ 475 (476)
+ ++++|++|||+++++|++++++++
T Consensus 443 ~~PpL~it~~ei~~~~~~l~~~l~~~~ 469 (472)
T PRK08742 443 WMPPYCVDEAQLALLADTTRHAIDEAV 469 (472)
T ss_pred EECCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 4 799999999999999999998754
No 27
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=1.7e-65 Score=517.52 Aligned_cols=387 Identities=20% Similarity=0.296 Sum_probs=324.0
Q ss_pred CeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcC---CCCCCCHHHHHHHHHHHhhCC-CCCe
Q 011856 82 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT---SFGAPCLLENVLAEMVISAVP-SIEM 157 (476)
Q Consensus 82 p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~---~~~~~~~~~~~la~~l~~~~~-~~e~ 157 (476)
|+++.+++|+|+||.|||+||||.+++++.++||+||+|.+|+++|++++. ..++.++...+|+++|++..| +.++
T Consensus 30 ~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~~~~~~~~~~~lae~L~~~~p~~~~~ 109 (466)
T PRK07030 30 LIPIRRGEGVWLEDFEGKRYLDAVSSWWVNVFGHANPRINQRIKDQVDQLEHVILAGFSHEPVIELSERLVKITPPGLSR 109 (466)
T ss_pred CceEEeeeccEEEECCCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHHhCCCCcCE
Confidence 578999999999999999999999999999999999999999999999853 235678999999999999987 6789
Q ss_pred EEEeCCHHHHHHHHHHHHHhc------cCCceEEEEeCCCCCCchhHHhhcCCCCccCCC-CCCCCCCCCCCCceee---
Q 011856 158 VRFVNSGTEACMGVLRLARAF------TGRERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLT--- 227 (476)
Q Consensus 158 v~~~~sGseA~~~al~~ar~~------~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~--- 227 (476)
|+|++||+||++.|+|+||.+ +++.+||.+.++|||++.+++..++.......+ |...++......+.+.
T Consensus 110 v~f~~sGsEAve~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~ 189 (466)
T PRK07030 110 CFYADNGSSAIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPE 189 (466)
T ss_pred EEEeCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCcccccc
Confidence 999999999999999999876 578899999999999999999887653322111 1111111000011111
Q ss_pred ------ccCCCHHHHHHHHhcCCCCeEEEEEcc-cCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccch
Q 011856 228 ------APFNDVSALENLFENNKGEIAAIILEP-VVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGA 299 (476)
Q Consensus 228 ------~~~~d~~~le~~l~~~~~~~a~vi~ep-~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~ 299 (476)
.+.++++++++.+.++++++++||+|| +++++|.+.++++|+++|+++|++||++||+|||+||| |+|.+|+
T Consensus 190 ~~~~~~~~~~~l~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG~~~a 269 (466)
T PRK07030 190 GMSWEEHSRRMFAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGTMFA 269 (466)
T ss_pred CCCHHHHHHHHHHHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCccccchH
Confidence 112346778899987778999999999 79999999999999999999999999999999999999 9999999
Q ss_pred hhccCCCCchhhhhhhcCCC-CcEEEEEecHHHHHhhcCC----CCccccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHH
Q 011856 300 QEYFGVTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAPA----GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLN 374 (476)
Q Consensus 300 ~~~~g~~pDi~t~sK~lg~G-~~iG~~~~~~~i~~~l~~~----~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~ 374 (476)
++++|+.||++|++|+++|| +|+|++++++++++.+... +...|++||++||++|++++++|++++++++.++++
T Consensus 270 ~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~h~~T~~gnpla~aaa~a~L~~i~~~~l~~~~~ 349 (466)
T PRK07030 270 CEQAGIRPDFLCLSKALTGGYLPLAAVLTTDTVYQAFYDDYPTLRAFLHSHSYTGNPLACAAALATLDIFEQDNVIENNR 349 (466)
T ss_pred HHhcCCCCCEEeeehhccCCcccceEEEecHHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 99999999999999999999 5999999999999987521 235688999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCc--CchhhcccchHHHHHHHHHHHHCCeEeccCCCcceEE-
Q 011856 375 KITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVY--NFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT- 451 (476)
Q Consensus 375 ~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~- 451 (476)
+++++|+++|+++. +++.+.++++.|+|+++++.+++.. ++. .+......+.+.|+++|+++.+.+ ..+++
T Consensus 350 ~~G~~l~~~L~~l~-~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~----~~~~~~~~i~~~~~~~Gvl~~~~g-~~i~~~ 423 (466)
T PRK07030 350 ALARRMAEATAHLA-DHPHVAEVRQTGMILAIEMVQDKASKTPYP----WQERRGLKVYQHALERGALLRPLG-SVVYFL 423 (466)
T ss_pred HHHHHHHHHHHHHh-cCCCEEEeEeceeEEEEEeccCccccccCc----chhHHHHHHHHHHHHCCeEEEecC-CEEEEE
Confidence 99999999999984 6888899999999999999754321 110 112234578889999999998864 34443
Q ss_pred -eCCCcHHHHHHHHHHHHHHHHHh
Q 011856 452 -SLAHSSDDIQHTITAAEKVKMRF 474 (476)
Q Consensus 452 -~~~~t~e~i~~~~~~l~~~~~~~ 474 (476)
++++|++||++++++|+++++++
T Consensus 424 Ppl~it~~eid~~~~~l~~al~~~ 447 (466)
T PRK07030 424 PPYVITPEQIDFLAEVASEGIDIA 447 (466)
T ss_pred CCccCCHHHHHHHHHHHHHHHHHH
Confidence 79999999999999999999876
No 28
>PRK07483 hypothetical protein; Provisional
Probab=100.00 E-value=1.8e-65 Score=515.27 Aligned_cols=387 Identities=24% Similarity=0.306 Sum_probs=323.2
Q ss_pred CCeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcC--CC-CCCCHHHHHHHHHHHhhCC-CCC
Q 011856 81 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT--SF-GAPCLLENVLAEMVISAVP-SIE 156 (476)
Q Consensus 81 ~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~--~~-~~~~~~~~~la~~l~~~~~-~~e 156 (476)
.|+++.+++|+|+||.|||+||||.+++++.++||+||+|.+|+++|++++. +. .+.++...+|+++|++..| +.+
T Consensus 12 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~av~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~ 91 (443)
T PRK07483 12 TLPVAVAGEGIYLIDATGKRYLDASGGAAVSCLGHSHPRVIAAIHAQIDRLAYAHTSFFTTEPAEALADRLVAAAPAGLE 91 (443)
T ss_pred CCceEEeceEEEEEeCCCCEEEEcCccHhhhccCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCC
Confidence 4899999999999999999999999999999999999999999999999853 22 2568888999999999987 578
Q ss_pred eEEEeCCHHHHHHHHHHHHHhc------cCCceEEEEeCCCCCCchhHHhhcCCCCccCCC-CCCCCCCCCCCCceeec-
Q 011856 157 MVRFVNSGTEACMGVLRLARAF------TGRERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTA- 228 (476)
Q Consensus 157 ~v~~~~sGseA~~~al~~ar~~------~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~- 228 (476)
+++|++||+||++.|+|+||.+ +++.+||.++++|||++.+++..++.......+ |...++ ..+..
T Consensus 92 ~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~------~~~~~~ 165 (443)
T PRK07483 92 HVYFVSGGSEAVEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEA------HHVSPC 165 (443)
T ss_pred EEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCC------EEeCCC
Confidence 9999999999999999999998 678899999999999999999887753322111 111111 01111
Q ss_pred -cCCC--------------HHHHHHHHh-cCCCCeEEEEEcccCC-CCCcccCCHHHHHHHHHHHHHhCCEEEEeccccC
Q 011856 229 -PFND--------------VSALENLFE-NNKGEIAAIILEPVVG-NSGFIAPKPDFLNAIRRITKENGALLIFDEVMTG 291 (476)
Q Consensus 229 -~~~d--------------~~~le~~l~-~~~~~~a~vi~ep~~~-~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g 291 (476)
+|++ ++++++++. .+++++++||+||+++ ++|.+.|+++||++|+++|++||++||+|||+||
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tG 245 (443)
T PRK07483 166 YAYREQRAGESDEAYGQRLADELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCG 245 (443)
T ss_pred ccccccccCCCHHHHHHHHHHHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeC
Confidence 1232 256777664 3456899999999998 5899999999999999999999999999999999
Q ss_pred c-cccccchhhccCCCCchhhhhhhcCCCC-cEEEEEecHHHHHhhcCC-CCccccCCCCCcHHHHHHHHHHHHHhcCCC
Q 011856 292 F-RLAYGGAQEYFGVTPDLTTLGKIIGGGL-PVGAYGGRRDIMEMVAPA-GPMYQAGTLSGNPLAMTAGIHTLKRLKEPG 368 (476)
Q Consensus 292 ~-r~g~~~~~~~~g~~pDi~t~sK~lg~G~-~iG~~~~~~~i~~~l~~~-~~~~~~~t~~~~~~~~aaa~aal~~~~~~~ 368 (476)
| |+|.+|+++++|+.|||+|+||++++|+ |+|++++++++++.+... ....|++||++||++|++++++|+.+++++
T Consensus 246 fGRtG~~~a~~~~gv~PDiv~~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~l~~i~~~~ 325 (443)
T PRK07483 246 MGRTGTLFACEEDGVAPDLVTIAKGLGAGYQPIGAVLASDRIYDAIADGSGFFQHGHTYLGHATACAAALAVQRVIAEDG 325 (443)
T ss_pred cccCcHHHHHhhcCCCCCeeeehhhhccCccccEEEEEcHHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhcC
Confidence 9 9999999999999999999999999996 999999999999988642 124588999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCC---
Q 011856 369 TYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ--- 445 (476)
Q Consensus 369 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~--- 445 (476)
+.+++++++++|+++|+++..+++.+.+++|.|+|+++++.++..... ...++......+.+.++++|+++.+.+
T Consensus 326 l~~~~~~~g~~l~~~L~~l~~~~~~i~~vRG~Glm~gie~~~~~~~~~--~~~~~~~~~~~~~~~~~~~Gll~~~~~~~~ 403 (443)
T PRK07483 326 LLANVRARGEQLRARLRERLGQHPHVGDIRGRGLFVGVELVADRATKA--PFDPALKLHARIKREAMARGLMVYPMGGTI 403 (443)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCeeeEeecccEEEEEEeecccccC--CCCchhhHHHHHHHHHHHCCcEEEecCccc
Confidence 999999999999999999888899999999999999999975321100 000122345678899999999997653
Q ss_pred ----CcceEE--eCCCcHHHHHHHHHHHHHHHHHhh
Q 011856 446 ----FEAGFT--SLAHSSDDIQHTITAAEKVKMRFL 475 (476)
Q Consensus 446 ----~~~~~~--~~~~t~e~i~~~~~~l~~~~~~~~ 475 (476)
.+.+++ ++++|++|||+++++|++++.+++
T Consensus 404 ~~~~~~~l~~~PpL~it~~eid~~~~~l~~~l~~~~ 439 (443)
T PRK07483 404 DGVRGDHVLLAPPFIITAAQIDEIVERLGDAIDAAL 439 (443)
T ss_pred cCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 134554 799999999999999999998753
No 29
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=4.7e-65 Score=513.17 Aligned_cols=386 Identities=24% Similarity=0.345 Sum_probs=322.0
Q ss_pred CCeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcCCC---CCCCHHHHHHHHHHHhhCCCC--
Q 011856 81 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSF---GAPCLLENVLAEMVISAVPSI-- 155 (476)
Q Consensus 81 ~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~---~~~~~~~~~la~~l~~~~~~~-- 155 (476)
+|+++.+++|+|+||.|||+||||.+++++.++||+||+|.+|+.+|++++... .+.++...+|+++|++.+|+.
T Consensus 24 ~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~ 103 (445)
T PRK08593 24 YPLVIDHGYGATLTDVDGKTYIDLLASASSQNVGHAPPRVVEAIKAQADKFIHYTPAYMYHEPLVRLAKKLCELAPGDFE 103 (445)
T ss_pred CCceEEeeeeCEEEeCCCCEEEECCccHHhhcCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCC
Confidence 389999999999999999999999999999999999999999999999986433 246888999999999999843
Q ss_pred CeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCC-ccCCC-CCCCCCCCCCCCceeec--cCC
Q 011856 156 EMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGV-ATLGL-PDSPGVPKGATYETLTA--PFN 231 (476)
Q Consensus 156 e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~-~~~~~-~~~~~~~~~~~~~~~~~--~~~ 231 (476)
++|+|++||+||++.|+|+||.++++.+||.++++|||++.+++..++... ....+ |..+++.....++.... ..+
T Consensus 104 ~~v~f~~SGseA~e~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 183 (445)
T PRK08593 104 KRVTFGLSGSDANDGIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEP 183 (445)
T ss_pred CEEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCC
Confidence 799999999999999999999999999999999999999999988876421 11111 11112100000001110 011
Q ss_pred C-------HHHHHHHHhcC--CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccchhh
Q 011856 232 D-------VSALENLFENN--KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQE 301 (476)
Q Consensus 232 d-------~~~le~~l~~~--~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~ 301 (476)
+ ++++++.++++ ++++++||+||+++++|.+.|+++||++|+++|++||++||+||||+|| |+|.+++++
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~GrtG~~~a~~ 263 (445)
T PRK08593 184 DANFVEEYLAPLKEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTGKWSSIS 263 (445)
T ss_pred cHHHHHHHHHHHHHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchHHHHH
Confidence 1 24556656432 4689999999999999999999999999999999999999999999999 999988999
Q ss_pred ccCCCCchhhhhhhcCCCCcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Q 011856 302 YFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELT 381 (476)
Q Consensus 302 ~~g~~pDi~t~sK~lg~G~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~ 381 (476)
++|+.||++|+||++++|+|+|++++++++++.+.. ..+..|+++||++|++++++|+.++++++.+++++++++|+
T Consensus 264 ~~gv~pDi~t~gK~l~~G~p~gav~~~~~i~~~~~~---~~~~~T~~~~pl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~ 340 (445)
T PRK08593 264 HFNITPDLMSFGKSLAGGMPMSAIVGRKEIMESLEA---PAHLFTTGANPVSCAAALATIDMIEDESLLQRSAEKGEYAR 340 (445)
T ss_pred hcCCCCCEeeecccccCCcccEEEEEcHHHHhhhcc---CCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998862 24667999999999999999999988899999999999999
Q ss_pred HHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCCcceEE--eCCCcHHH
Q 011856 382 QGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDD 459 (476)
Q Consensus 382 ~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~--~~~~t~e~ 459 (476)
++|+++..+++++.+++|.|+|+++++..+... ..++......+...|+++||++.+.+.+.+++ ++.+|++|
T Consensus 341 ~~L~~l~~~~~~v~~vrG~Gl~~gi~l~~~~~~-----~~~~~~~~~~~~~~~~~~Gv~~~~~~~~~lr~~p~l~~t~~~ 415 (445)
T PRK08593 341 KRFDQWVSKYNFVGDVRGYGLSIGIDIVSDKKL-----KTRDNEAALKICNYCFEHGVVIIAVAGNVLRFQPPLVITYEQ 415 (445)
T ss_pred HHHHHHHhcCCcEEEEeccceEEEEEEecCCCc-----CCCcHHHHHHHHHHHHHCCeEEeccCCCEEEEECCCccCHHH
Confidence 999999888999999999999999999753221 12344556788999999999997755455554 79999999
Q ss_pred HHHHHHHHHHHHHHh
Q 011856 460 IQHTITAAEKVKMRF 474 (476)
Q Consensus 460 i~~~~~~l~~~~~~~ 474 (476)
||+++++|+++++++
T Consensus 416 id~~~~~l~~~l~~~ 430 (445)
T PRK08593 416 LDTALNTIEQAFTAL 430 (445)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999998865
No 30
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=3.4e-65 Score=513.59 Aligned_cols=406 Identities=29% Similarity=0.413 Sum_probs=338.6
Q ss_pred CChhHHHHHHHHhhhCCCCCCCccccccccCCCCeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHH
Q 011856 49 TLKKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETM 128 (476)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l 128 (476)
..+++++++++.+++++.+.. ..+|+++.+++|+|+||.|||+||||.+++++.++||+||+|.+|+.+|+
T Consensus 13 ~~~~s~~l~~~~~~~~~~~~~---------~~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql 83 (441)
T PRK05769 13 PGPKAREIIERDEKYLAQSTR---------RWYPLVIERGEGVWVEDVDGNVYLDFNAGIAVTNVGHAHPKVVKAVKEQA 83 (441)
T ss_pred CCccHHHHHHHHHHhhCcccc---------cCCCeeEEecceEEEEeCCCCEEEECCCchhhcccCCCCHHHHHHHHHHH
Confidence 345677788887777765421 12489999999999999999999999999999999999999999999999
Q ss_pred HhcCCC---CCCCHHHHHHHHHHHhhCC--CCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcC
Q 011856 129 KKGTSF---GAPCLLENVLAEMVISAVP--SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAG 203 (476)
Q Consensus 129 ~~~~~~---~~~~~~~~~la~~l~~~~~--~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g 203 (476)
+++.+. .+.++...+|+++|++..| ..++|+|+|||+||++.|+|+||.++++.+||.++++|||++.+++..++
T Consensus 84 ~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~ 163 (441)
T PRK05769 84 EKFLHYSLTDFYYEPAVELAERLVEIAPGGFEKKVFFTNSGTESNEAAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTA 163 (441)
T ss_pred HhccCccCcccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcC
Confidence 986433 3457889999999999997 36899999999999999999999999999999999999999999988765
Q ss_pred CCC-ccCCC-CCCCCCCCCCCCceeeccCC--C--------HHHHHH-HHhc--CCCCeEEEEEcccCCCCCcccCCHHH
Q 011856 204 SGV-ATLGL-PDSPGVPKGATYETLTAPFN--D--------VSALEN-LFEN--NKGEIAAIILEPVVGNSGFIAPKPDF 268 (476)
Q Consensus 204 ~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~--d--------~~~le~-~l~~--~~~~~a~vi~ep~~~~~G~i~~~~~~ 268 (476)
... ....+ |..+++......+.+.+|++ | ++.+++ ++++ +++++++||+||+++++|.+.|+++|
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~ 243 (441)
T PRK05769 164 SKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNF 243 (441)
T ss_pred CCcccccCCCCCCCCeEEeCCCccccccccCCchHHHHHHHHHHHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHH
Confidence 422 11111 22333333223334444544 1 344666 4432 35689999999999999999999999
Q ss_pred HHHHHHHHHHhCCEEEEeccccCc-cccccchhhccCCCCchhhhhhhcCCCCcEEEEEecHHHHHhhcCCCCccccCCC
Q 011856 269 LNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTL 347 (476)
Q Consensus 269 l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pDi~t~sK~lg~G~~iG~~~~~~~i~~~l~~~~~~~~~~t~ 347 (476)
|++|+++|++||+++|+||||+|| |+|.+++++++|+.||++||||++++|+|+|++++++++++.+. ..+.+||
T Consensus 244 l~~l~~l~~~~g~lli~DEv~tG~gr~G~~~a~~~~gv~pDivt~~K~l~~G~p~gav~~~~~i~~~~~----~~~~~T~ 319 (441)
T PRK05769 244 FKELRKLADKYGILLIDDEVQTGMGRTGKMFAIEHFGVEPDIITLAKAIAGGLPLGAVIGRAELMFLPP----GSHANTF 319 (441)
T ss_pred HHHHHHHHHHcCCEEEEechhhCCCcccceehhhccCCCCCEEEEcccccCCcccEEEEEehhhhhcCC----CCCCCCC
Confidence 999999999999999999999999 99998899999999999999999999999999999999986432 3578899
Q ss_pred CCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHH
Q 011856 348 SGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKF 427 (476)
Q Consensus 348 ~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~ 427 (476)
++||++|++++++|+.+++ ++.+++++++++|+++|+++..+++.+.++++.|+|++++|.+++ ..++....
T Consensus 320 ~g~p~~~aaa~a~L~~l~~-~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~-------~~~~~~~~ 391 (441)
T PRK05769 320 GGNPVAAAAALATLEELEE-GLLENAQKLGEYLRKELKELKEKYEFIGDVRGLGLMIGVELVKDR-------KEPDPKLR 391 (441)
T ss_pred CcCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCCCeeeeecceEEEEEEeccCC-------ccccHHHH
Confidence 9999999999999999988 999999999999999999998888988999999999999996532 11234455
Q ss_pred HHHHHHHHHCCeEeccCCCcceEE--eCCCcHHHHHHHHHHHHHHHHHhh
Q 011856 428 ARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAEKVKMRFL 475 (476)
Q Consensus 428 ~~~~~~l~~~Gv~~~~~~~~~~~~--~~~~t~e~i~~~~~~l~~~~~~~~ 475 (476)
..+.+.|+++||++.+.+.+.+++ ++.+|++|||+++++|++++.+++
T Consensus 392 ~~~~~~~~~~Gil~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~~ 441 (441)
T PRK05769 392 DKVLYEAFKRGLLLLGAGKSAIRIIPPLIITEEEADIGLEILEEAIKELL 441 (441)
T ss_pred HHHHHHHHhCCcEEecCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHhC
Confidence 778899999999998876555655 688899999999999999998764
No 31
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=100.00 E-value=6.4e-65 Score=516.27 Aligned_cols=390 Identities=24% Similarity=0.309 Sum_probs=319.1
Q ss_pred CCeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcCCC----CCCCHHHHHHHHHHHhhCC--C
Q 011856 81 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSF----GAPCLLENVLAEMVISAVP--S 154 (476)
Q Consensus 81 ~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~----~~~~~~~~~la~~l~~~~~--~ 154 (476)
+|+++++++|+|+||+|||+||||.++++++++||+||+|++|+.+|++++..+ +.+++...+|+++|.+.++ +
T Consensus 71 ~p~~i~~~~G~~l~D~dG~~ylD~~sg~~~~~lGh~hp~v~~Av~~ql~~~~~~~~~~~~~~~~~~~lae~L~~~~~~~~ 150 (504)
T PLN02760 71 EPLVIEKSEGSYVYDINGKKYLDALAGLWCTALGGSEPRLVAAATEQLNKLPFYHSFWNRTTKPSLDLAKELLEMFTARK 150 (504)
T ss_pred CCceEEeeeeeEEEECCCCEEEEcCcCHHhcccCCCCHHHHHHHHHHHhhccceecccccCcHHHHHHHHHHHhhcCCCC
Confidence 589999999999999999999999999999999999999999999999985422 4578889999999999864 4
Q ss_pred CCeEEEeCCHHHHHHHHHHHHHhc------cCCceEEEEeCCCCCCchhHHhhcCCCCccCCC-CCCCCCCCCCCCceee
Q 011856 155 IEMVRFVNSGTEACMGVLRLARAF------TGRERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLT 227 (476)
Q Consensus 155 ~e~v~~~~sGseA~~~al~~ar~~------~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~ 227 (476)
.++++|+|||+||++.|+|+||.+ +++.+||.++++|||++...+..++.......+ +...++.....+..+.
T Consensus 151 ~~~v~f~~SGsEA~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p~~~~ 230 (504)
T PLN02760 151 MGKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPHYWR 230 (504)
T ss_pred CCEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCCcccc
Confidence 578999999999999999999866 357899999999999998888777653321111 0011111111111111
Q ss_pred --ccCCC--------HHHHHHHHh-cCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccc
Q 011856 228 --APFND--------VSALENLFE-NNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLA 295 (476)
Q Consensus 228 --~~~~d--------~~~le~~l~-~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g 295 (476)
+|..+ .++|++++. ++++++++||+||+++++|.+.|+++||++|+++|++||++||+|||+||| |+|
T Consensus 231 ~~~~~~~~~~~~~~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG 310 (504)
T PLN02760 231 FHLPGETEEEFSTRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLG 310 (504)
T ss_pred cCCCCCcHHHHHHHHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccc
Confidence 11111 245777774 345689999999999999999999999999999999999999999999999 999
Q ss_pred ccchhhccCCCCchhhhhhhcCCC-CcEEEEEecHHHHHhhcCC----CCccccCCCCCcHHHHHHHHHHHHHhcCCCHH
Q 011856 296 YGGAQEYFGVTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAPA----GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTY 370 (476)
Q Consensus 296 ~~~~~~~~g~~pDi~t~sK~lg~G-~~iG~~~~~~~i~~~l~~~----~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~ 370 (476)
.+|+++++|+.|||+||||++++| +|+|++++++++++.+... +...|++||++||++|++++++|+.++++++.
T Consensus 311 ~~~a~e~~gv~PDivtlgK~lggG~~PigAv~~~~~i~d~~~~~~~~~~~~~h~~T~~gnPl~~Aaala~Le~i~~~~l~ 390 (504)
T PLN02760 311 TMFGCDKYNIKPDLVSLAKALSSAYMPIGAVLVSPEISDVIHSQSNKLGSFAHGFTYSGHPVSCAVALEALKIYKERNIP 390 (504)
T ss_pred hhhHHHhcCCCCcEEEecccccCCccccceEeecHHHHhhhhcccccccCcccCCCCCCCHHHHHHHHHHHHHHHhCCHH
Confidence 999999999999999999999998 5999999999999988632 23468899999999999999999999989999
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCCcceE
Q 011856 371 EYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGF 450 (476)
Q Consensus 371 ~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~ 450 (476)
+++++++++|+++|+++ .+++++.+++|.|+|+++++.++.... ....++......+.+.|+++||++.+.+ ..++
T Consensus 391 ~~~~~~g~~l~~~L~~l-~~~~~v~~vrG~Gl~~gie~~~~~~~~--~~~~~~~~~~~~i~~~~~~~Gvl~~~~g-~~lr 466 (504)
T PLN02760 391 EHVNKIAPRFQDGIKAF-SGSPIIGEIRGTGLILGTEFVDNKSPN--DPFPAEWGVGAYFGAECKKRGMLVRVAG-DNIM 466 (504)
T ss_pred HHHHHHHHHHHHHHHHH-hcCCCeeeEEeCceEEEEEEecCCccc--ccccchhHHHHHHHHHHHhCCcEEEecC-CEEE
Confidence 99999999999999998 668889999999999999997543110 0001122345678899999999998765 3455
Q ss_pred E--eCCCcHHHHHHHHHHHHHHHHHh
Q 011856 451 T--SLAHSSDDIQHTITAAEKVKMRF 474 (476)
Q Consensus 451 ~--~~~~t~e~i~~~~~~l~~~~~~~ 474 (476)
+ ++++|++|||+++++|++++.++
T Consensus 467 l~Ppl~it~eeid~~~~~l~~al~~~ 492 (504)
T PLN02760 467 MSPPLIITPEEVDELISIYGKALKAT 492 (504)
T ss_pred EECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 5 58899999999999999998765
No 32
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=100.00 E-value=5.5e-65 Score=513.26 Aligned_cols=391 Identities=24% Similarity=0.346 Sum_probs=318.9
Q ss_pred CCeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcCC---CCCCCHHHHHHHHHHHhhCCCC--
Q 011856 81 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTS---FGAPCLLENVLAEMVISAVPSI-- 155 (476)
Q Consensus 81 ~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~---~~~~~~~~~~la~~l~~~~~~~-- 155 (476)
.|+++.+++|+|+||.|||+||||.+++++.++||+||+|.+|+.+|++++.. ..++++...+|+++|++.+|+.
T Consensus 21 ~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~ 100 (442)
T TIGR00709 21 LPTAFAKAQGCWVTDVEGKEYLDFLAGAGTLALGHNHPNMKQKILDYLQSGLPLHTLDLTTPLKDAFIEALLNIIPKRKM 100 (442)
T ss_pred CCceEEeccccEEEeCCCCEEEEccccHhhhcCCCCCHHHHHHHHHHHHhccCccccccCcHHHHHHHHHHHHhCCCcCC
Confidence 48999999999999999999999999999999999999999999999998532 2357889999999999999742
Q ss_pred -Ce-EEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCC-CCCCCCCCCCCCceeeccCC-
Q 011856 156 -EM-VRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTAPFN- 231 (476)
Q Consensus 156 -e~-v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~- 231 (476)
.+ ++|+|||+||++.|+|+||.+++|.+||.++++|||++..++..++.......+ +...++......+.+..+++
T Consensus 101 ~~~~~f~~~sGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (442)
T TIGR00709 101 DYKLQFPGPSGADAVEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGI 180 (442)
T ss_pred CccEEEeCCCHHHHHHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCccccccccC
Confidence 34 555699999999999999999999999999999999999999887642211111 11122211112223333333
Q ss_pred ----CH----HHHHHHHh---cCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccch
Q 011856 232 ----DV----SALENLFE---NNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGA 299 (476)
Q Consensus 232 ----d~----~~le~~l~---~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~ 299 (476)
+. +.+++.+. ...+++++||+||+++++|.+.++++||++|+++|++||++||+||||+|| |+|.+++
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a 260 (442)
T TIGR00709 181 GGEAGSNASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSGTMFA 260 (442)
T ss_pred CchhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhH
Confidence 12 22444443 234579999999999999999999999999999999999999999999999 9999999
Q ss_pred hhccCCCCchhhhhhhcCCCCcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Q 011856 300 QEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGE 379 (476)
Q Consensus 300 ~~~~g~~pDi~t~sK~lg~G~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~ 379 (476)
++++|+.||++|+||++++|+|+|+++++++ ++.+. ...+.+||++||++|++++++|+.++++++.+++++++++
T Consensus 261 ~~~~gv~PDiv~~gK~l~~G~Pigav~~~~~-~~~~~---~~~~~~T~~gnpla~aaa~a~L~~i~~~~l~~~~~~~g~~ 336 (442)
T TIGR00709 261 FEHAGIEPDFVVMSKAVGGGLPLAVLLIAPE-FDAWQ---PAGHTGTFRGNQLAMVTGTEALNYWKDDNLAQNAQERGER 336 (442)
T ss_pred HHHcCCCCcEEEEcccccCCcccEEEEEchH-HhccC---CCcCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 9999999999999999999999999999988 45554 3457789999999999999999999889999999999999
Q ss_pred HHHHHHHHhhhcCCceEeeeeceeEEEEEecCC-CcCchhhcccchHHHHHHHHHHHHCCeEeccCC--CcceE--EeCC
Q 011856 380 LTQGIIDAGKKAGHAICGGYISGMFGFFFTEGP-VYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ--FEAGF--TSLA 454 (476)
Q Consensus 380 l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~--~~~~~--~~~~ 454 (476)
|+++|+++..+++.+.+++|.|+|++++|.++. ..++.....++......+...|+++||++.+.+ .+.++ ++++
T Consensus 337 l~~~L~~l~~~~~~v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~~l~~~Ppl~ 416 (442)
T TIGR00709 337 ITSFLDDMIKEHPCIGNVRGRGLMQGIMIVDERQSKDATGAYPRDCELAAAIQGACFENGLLLETGGREGEVFRLLCPIT 416 (442)
T ss_pred HHHHHHHHHHhCCCeeeeeccceEEEEEEccCcccccccccCCcchHHHHHHHHHHHHCCeEEeecCCCCCEEEEECCCC
Confidence 999999998889999999999999999997532 111111111233456778889999999997654 23344 5899
Q ss_pred CcHHHHHHHHHHHHHHHHHhh
Q 011856 455 HSSDDIQHTITAAEKVKMRFL 475 (476)
Q Consensus 455 ~t~e~i~~~~~~l~~~~~~~~ 475 (476)
+|++|+++++++|++++.+++
T Consensus 417 it~~ei~~~~~~l~~~l~~~~ 437 (442)
T TIGR00709 417 IDQEECEEGISRFKQAVEEAL 437 (442)
T ss_pred CCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998763
No 33
>PRK06541 hypothetical protein; Provisional
Probab=100.00 E-value=2.2e-64 Score=509.20 Aligned_cols=419 Identities=21% Similarity=0.279 Sum_probs=337.1
Q ss_pred hhHHHHHHHHhhhCCCCCCCccccccccCCCCeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHh
Q 011856 51 KKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKK 130 (476)
Q Consensus 51 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~ 130 (476)
.+|.++.++.+++++.++.+. ..+.. ..|+++.+++|+|+||.|||+||||.+++++.++||+||+|.+|+.+|+++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~q~~~ 83 (460)
T PRK06541 7 NSDTDLQALAKRHLWMHFTRH-GAYID--APVPVIVRGEGCYIWDDRGKRYLDGLAGLFVVQVGHGRAELAEAAAKQAGT 83 (460)
T ss_pred ccHHHHHHHhhcccccCccCc-ccccc--CCCceEEeCcccEEEeCCCCEEEECCccHHhccCCCCCHHHHHHHHHHHhh
Confidence 456777777778777655432 11111 137889999999999999999999999999999999999999999999998
Q ss_pred cC---CCCCCCHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHHHhc---c---CCceEEEEeCCCCCCchhHHh
Q 011856 131 GT---SFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAF---T---GRERIIKFEGCYHGHADPFLV 200 (476)
Q Consensus 131 ~~---~~~~~~~~~~~la~~l~~~~~-~~e~v~~~~sGseA~~~al~~ar~~---~---~~~~ii~~~~~yhg~~~~~~~ 200 (476)
.. .+.+.++...+|+++|++..| +.++|+|++||+||++.|+|+||.+ + ++.+||.++++|||++.+++.
T Consensus 84 ~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s 163 (460)
T PRK06541 84 LAFFPLWSYAHPPAIELAERLAALAPGDLNRVFFTTGGSEAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALA 163 (460)
T ss_pred CcCccccccCCHHHHHHHHHHHHhCCCCcCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhc
Confidence 53 335678889999999999987 4789999999999999999999988 3 478999999999999999998
Q ss_pred hcCCCCccCCC-CCCCCCCCCCCCceeecc-C-CC--------HHHHHHHHhc-CCCCeEEEEEcccCCCCCcccCCHHH
Q 011856 201 KAGSGVATLGL-PDSPGVPKGATYETLTAP-F-ND--------VSALENLFEN-NKGEIAAIILEPVVGNSGFIAPKPDF 268 (476)
Q Consensus 201 ~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~-~-~d--------~~~le~~l~~-~~~~~a~vi~ep~~~~~G~i~~~~~~ 268 (476)
.++.......+ |...++......+.+..| + ++ ++.+++++++ +++++++||+||+++++|.+.++++|
T Consensus 164 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~y 243 (460)
T PRK06541 164 ITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFGRWAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGY 243 (460)
T ss_pred CcCChhhccccCCCCCCcEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHH
Confidence 87654322111 222233222222333333 3 22 3678888864 34689999999999999999999999
Q ss_pred HHHHHHHHHHhCCEEEEeccccCc-cccccchhhccCCCCchhhhhhhcCCCC-cEEEEEecHHHHHhhcCC-CCccccC
Q 011856 269 LNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGL-PVGAYGGRRDIMEMVAPA-GPMYQAG 345 (476)
Q Consensus 269 l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pDi~t~sK~lg~G~-~iG~~~~~~~i~~~l~~~-~~~~~~~ 345 (476)
|++|+++|++||++||+||||+|| |+|.+|+++++|+.||++|+||++++|+ |+|++++++++++.+... ....+.+
T Consensus 244 l~~l~~lc~~~g~llI~DEV~tGfGR~G~~~a~~~~gv~PDivt~gK~l~~G~~pigav~~~~~i~~~~~~~~~~~~~~~ 323 (460)
T PRK06541 244 FERVREICDRYDVLLVSDEVICAFGRLGEMFGCERFGYVPDIITCAKGITSGYSPLGAMIASDRLFEPFLDGPTMFLHGY 323 (460)
T ss_pred HHHHHHHHHHcCCEEEEechhhCCCcCchhhhhhhcCCCCCEEEecccccCCccceeEEEEcHHHHHHhhcCCCccccCC
Confidence 999999999999999999999999 9999999999999999999999999997 999999999999887643 2345778
Q ss_pred CCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCc--Cchhhcccc
Q 011856 346 TLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVY--NFEDAKKSE 423 (476)
Q Consensus 346 t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~--~~~~~~~~~ 423 (476)
|+++||+++++++++|+.++++++.+++++++++|+++|+++.. ++++.++++.|+|++++|.+++.. ++... ..+
T Consensus 324 T~~gnp~~~aaala~l~~l~~~~~~~~~~~~g~~l~~~L~~l~~-~~~v~~vrg~Gl~~~ie~~~~~~~~~~~~~~-~~~ 401 (460)
T PRK06541 324 TFGGHPVSAAVALANLDIFEREGLLDHVRDNEPAFRATLEKLLD-LPIVGDVRGDGYFYGIELVKDKATKETFTDD-ESE 401 (460)
T ss_pred CCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhc-CCCeEEEEecceEEEEEEecCcccccCCcch-hhh
Confidence 99999999999999999998889999999999999999999865 788889999999999999753211 11000 001
Q ss_pred hHHHHHHHHHHHHCCeEeccC--CCcceEE--eCCCcHHHHHHHHHHHHHHHHHh
Q 011856 424 TTKFARFYRGMLEEGVYFAPS--QFEAGFT--SLAHSSDDIQHTITAAEKVKMRF 474 (476)
Q Consensus 424 ~~~~~~~~~~l~~~Gv~~~~~--~~~~~~~--~~~~t~e~i~~~~~~l~~~~~~~ 474 (476)
......+...|+++||++.+. +.+.+++ ++.+|++|||+++++|++++.++
T Consensus 402 ~~~~~~~~~~l~~~Gi~~~~~~~g~~~lrl~Ppl~~t~~~id~~~~~l~~~l~~~ 456 (460)
T PRK06541 402 RLLRGFLSPALFEAGLYCRADDRGDPVVQLAPPLISGQEEFDEIEQILRSVLTEA 456 (460)
T ss_pred hhHHHHHHHHHHhCCeEEEecCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 112236778999999999874 3345555 67899999999999999999764
No 34
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=3.8e-64 Score=503.65 Aligned_cols=377 Identities=28% Similarity=0.386 Sum_probs=323.1
Q ss_pred CeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcCCC---CCCCHHHHHHHHHHHhhCCC--CC
Q 011856 82 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSF---GAPCLLENVLAEMVISAVPS--IE 156 (476)
Q Consensus 82 p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~---~~~~~~~~~la~~l~~~~~~--~e 156 (476)
|+++.+++|+|+||+|||+||||.+++++.++||+||+|.+|+++|+++.... .++++...+|+++|++.+|+ .+
T Consensus 23 p~~i~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~l~~~~p~~~~~ 102 (425)
T PRK07495 23 QIYADRAENAEIWDKEGRRYIDFAAGIAVVNTGHRHPRVIAAVKAQLDRFTHTCHQVVPYENYVRLAERLNALVPGDFAK 102 (425)
T ss_pred CeeEEeeeecEEEeCCCCEEEEccccHHhhccCCCCHHHHHHHHHHHhhccCcccCccCCHHHHHHHHHHHHhCCCCCCC
Confidence 89999999999999999999999999999999999999999999999985432 45788889999999999984 37
Q ss_pred eEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCC-CccCCCCCCCCCCCCCCCceeeccCCC---
Q 011856 157 MVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSG-VATLGLPDSPGVPKGATYETLTAPFND--- 232 (476)
Q Consensus 157 ~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d--- 232 (476)
+++|+|||+||++.|+|+||.++++.+||.++++|||++..++..++.. .... ++... ..++..+|+++
T Consensus 103 ~v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~------~~~~~-~~~~~~~~~~~~~~ 175 (425)
T PRK07495 103 KTIFVTTGAEAVENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKV------GFGAM-MPDVYHVPFPVELH 175 (425)
T ss_pred EEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCccccc------CCCCC-CCCeEEecCCcccc
Confidence 9999999999999999999999999999999999999998888776642 1111 11100 12344555543
Q ss_pred -------HHHHHHHHhc--CCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccchhhc
Q 011856 233 -------VSALENLFEN--NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEY 302 (476)
Q Consensus 233 -------~~~le~~l~~--~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~ 302 (476)
++++++.+++ .++++++||+||+++++|.+.++++|+++|+++|++||+++|+||||+|| |+|.++++++
T Consensus 176 g~~~~~~~~~l~~~~~~~~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~a~~~ 255 (425)
T PRK07495 176 GVSVEQSLAALDKLFKADVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGKLFAMEH 255 (425)
T ss_pred cccHHHHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCCCceeecc
Confidence 5667887763 34679999999999999989999999999999999999999999999999 9998888999
Q ss_pred cCCCCchhhhhhhcCCCCcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Q 011856 303 FGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQ 382 (476)
Q Consensus 303 ~g~~pDi~t~sK~lg~G~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~ 382 (476)
+|+.||++||||++++|+|+|++++++++++.+.. ..+.+||++||++|++++++|+.++++++.++++++++++++
T Consensus 256 ~gv~pDi~tlsK~l~~G~pigav~~~~~i~~~~~~---~~~~~T~~~~pl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~ 332 (425)
T PRK07495 256 HEVAADLTTMAKGLAGGFPLAAVTGRAEIMDAPGP---GGLGGTYGGNPLGIAAAHAVLDVIEEEDLCERANQLGNRLKQ 332 (425)
T ss_pred cCCCCCEEeehhhhcCCccceEEEEcHHHHhccCC---CCcCCCCCCCHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998863 347789999999999999999999888999999999999999
Q ss_pred HHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCC--cceEE--eCCCcHH
Q 011856 383 GIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF--EAGFT--SLAHSSD 458 (476)
Q Consensus 383 ~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~--~~~~~--~~~~t~e 458 (476)
+|+++..+++.+.++++.|+|++++|.++.. ..++......+.+.|+++|+++.+.+. +.+++ ++++|++
T Consensus 333 ~L~~l~~~~~~i~~vrG~Gl~~~iel~~~~~------~~~~~~~~~~~~~~~~~~Gvl~~~~g~~~~~~r~~Ppl~it~~ 406 (425)
T PRK07495 333 RLASLRETVPEIADIRGPGFMNAVEFNDADS------GLPSAEFANRVRLKALEKGLILLTCGVHGNVIRFLAPITIQDD 406 (425)
T ss_pred HHHHHHhhCCCeeeeecCceEEEEEEecCCC------CCccHHHHHHHHHHHHHCCeEEeecCCCCCEEEEeCCCccCHH
Confidence 9999988888889999999999999965321 123444567788999999999976542 44544 7999999
Q ss_pred HHHHHHHHHHHHHHHh
Q 011856 459 DIQHTITAAEKVKMRF 474 (476)
Q Consensus 459 ~i~~~~~~l~~~~~~~ 474 (476)
++|+++++|+++++++
T Consensus 407 ~id~~~~~l~~~l~~~ 422 (425)
T PRK07495 407 VFAEALDILEASILEA 422 (425)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999999865
No 35
>PRK06917 hypothetical protein; Provisional
Probab=100.00 E-value=1.8e-64 Score=508.72 Aligned_cols=392 Identities=22% Similarity=0.284 Sum_probs=323.0
Q ss_pred CCeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcCCC---CCCCHHHHHHHHHHHhhCCC-CC
Q 011856 81 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSF---GAPCLLENVLAEMVISAVPS-IE 156 (476)
Q Consensus 81 ~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~---~~~~~~~~~la~~l~~~~~~-~e 156 (476)
+| ++++++|+|+||.|||+||||.+++++.++||+||+|.+|+.+|++++... .+.++...+|+++|++.+|+ .+
T Consensus 14 ~p-~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~hp~v~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~ 92 (447)
T PRK06917 14 YP-VISHGKGVYLYDQNGNKYFDGSSGAVTAGIGHGVKEIADAIKEQAEEVSFVYRSQFTSEPAEKLAKKLSDLSPGDLN 92 (447)
T ss_pred CC-eEEeeeeeEEEeCCCCEEEECchhHHhccCCCCCHHHHHHHHHHHhhCcCccccccCCHHHHHHHHHHHHhCCCCCC
Confidence 36 589999999999999999999999999999999999999999999985322 35688899999999999984 58
Q ss_pred eEEEeCCHHHHHHHHHHHHHhc------cCCceEEEEeCCCCCCchhHHhhcCCCCccCCC-CCCCCCCCCCCCceee--
Q 011856 157 MVRFVNSGTEACMGVLRLARAF------TGRERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLT-- 227 (476)
Q Consensus 157 ~v~~~~sGseA~~~al~~ar~~------~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~-- 227 (476)
+++|++||+||++.|+|+||.+ ++|.+||.++++|||++++++..++.......+ |...+++.........
T Consensus 93 ~v~f~~sGsEAve~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 172 (447)
T PRK06917 93 WSFFVNSGSEANETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCP 172 (447)
T ss_pred EEEEeCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccccc
Confidence 9999999999999999999765 678999999999999999999877643221111 1111111000011111
Q ss_pred -------ccCCCHHHHHHHHhcCC-CCeEEEEEcccCCC-CCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccccc
Q 011856 228 -------APFNDVSALENLFENNK-GEIAAIILEPVVGN-SGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG 297 (476)
Q Consensus 228 -------~~~~d~~~le~~l~~~~-~~~a~vi~ep~~~~-~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~ 297 (476)
+.+++++.+++++++++ +++++||+||++++ +|.+.|+++|+++|+++|++||++||+|||++|| |+|.+
T Consensus 173 ~~~~~~~~~~~~~~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG~~ 252 (447)
T PRK06917 173 VQKVYPTCQLACATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRTGAM 252 (447)
T ss_pred cCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCcccch
Confidence 12235678888887653 57999999999985 7799999999999999999999999999999999 99999
Q ss_pred chhhccCCCCchhhhhhhcCCCC-cEEEEEecHHHHHhhcCC-CCccccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHH
Q 011856 298 GAQEYFGVTPDLTTLGKIIGGGL-PVGAYGGRRDIMEMVAPA-GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNK 375 (476)
Q Consensus 298 ~~~~~~g~~pDi~t~sK~lg~G~-~iG~~~~~~~i~~~l~~~-~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~ 375 (476)
|+++++++.||++|+||++++|+ |+|++++++++++.+... +...+++||++||++|++++++|+.++++++.+++++
T Consensus 253 ~a~~~~gv~PDi~~~gK~l~~G~~Pi~a~~~~~~i~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~l~~~~~~ 332 (447)
T PRK06917 253 FAMEHWGVEPDIMTLGKGLGAGYTPIAATVVSDRVMEPILRGSRSIMSGHTLSANPLSAATALAVLEYMEKHNLPEKAAE 332 (447)
T ss_pred hhHHhcCCCCCEEEeeehhccCCcceEEEEEcHHHHHHHhccCcccccccCCCCCHHHHHHHHHHHHHHHHCCHHHHHHH
Confidence 99999999999999999999996 999999999999988643 2345778999999999999999999988899999999
Q ss_pred HHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCC-------Ccc
Q 011856 376 ITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ-------FEA 448 (476)
Q Consensus 376 ~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~-------~~~ 448 (476)
++++|++.|+++..+++.+.++++.|+|++++|.+++.. .+...++......+.+.|+++||++.+.+ .+.
T Consensus 333 ~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~ie~~~~~~~--~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~g~~~~~ 410 (447)
T PRK06917 333 KGEYLIKGLQKVQQQSTIIGDVRGKGLLIGVEFVADKKT--KQPFSKSQAVASELISVAAKNGLLLYPAVAGQDGKEGDA 410 (447)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeecceEEEEEEeccCCc--CCCCcchhHHHHHHHHHHHhCCcEEEecccccCCCCCCE
Confidence 999999999999888999999999999999999754321 00011123456788899999999998753 234
Q ss_pred eEE--eCCCcHHHHHHHHHHHHHHHHHhh
Q 011856 449 GFT--SLAHSSDDIQHTITAAEKVKMRFL 475 (476)
Q Consensus 449 ~~~--~~~~t~e~i~~~~~~l~~~~~~~~ 475 (476)
+++ ++++|++|||+++++|+++++++.
T Consensus 411 i~l~Ppl~it~~eid~~~~~l~~~l~~~~ 439 (447)
T PRK06917 411 VIIAPPMTITYSELDELLSIFAKSVEEMM 439 (447)
T ss_pred EEEECCCcCCHHHHHHHHHHHHHHHHHHH
Confidence 444 688999999999999999998763
No 36
>PRK07480 putative aminotransferase; Validated
Probab=100.00 E-value=2.9e-64 Score=507.80 Aligned_cols=390 Identities=22% Similarity=0.278 Sum_probs=317.9
Q ss_pred CCeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcCC----CCCCCHHHHHHHHHHHhhCC-CC
Q 011856 81 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTS----FGAPCLLENVLAEMVISAVP-SI 155 (476)
Q Consensus 81 ~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~----~~~~~~~~~~la~~l~~~~~-~~ 155 (476)
.|+++++++|+|+||.|||+||||.+++++.++||+||+|.+|+++|++++.. +++.++...+|+++|++.+| +.
T Consensus 32 ~~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~ 111 (456)
T PRK07480 32 GSRVITRAEGVYLWDSEGNKILDGMAGLWCVNVGYGRKELADAAARQMRELPYYNTFFKTTHPPAIELAAKLAEVAPPGF 111 (456)
T ss_pred CCceEEeceeeEEEeCCCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCcccccccCCHHHHHHHHHHHHhCCCCc
Confidence 37899999999999999999999999999999999999999999999998532 24678999999999999998 47
Q ss_pred CeEEEeCCHHHHHHHHHHHHHhc------cCCceEEEEeCCCCCCchhHHhhcCCCCccCCC-CCCCCCCCCCCCceee-
Q 011856 156 EMVRFVNSGTEACMGVLRLARAF------TGRERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLT- 227 (476)
Q Consensus 156 e~v~~~~sGseA~~~al~~ar~~------~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~- 227 (476)
++++|++||+||++.|+|+||.+ +++.+||.++++|||++...+..++........ +..+++.....+..+.
T Consensus 112 ~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~ 191 (456)
T PRK07480 112 NHVFFTNSGSEANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGE 191 (456)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCccccc
Confidence 89999999999999999999998 567889999999999998888777653221111 0011111100000111
Q ss_pred ------ccCCC--HHHHHHHH-hcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccccc
Q 011856 228 ------APFND--VSALENLF-ENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG 297 (476)
Q Consensus 228 ------~~~~d--~~~le~~l-~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~ 297 (476)
.++++ ++.|++.+ +..++++++||+||+++++|.+.|+++||++|+++|++||++||+|||+||| |+|.+
T Consensus 192 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~ 271 (456)
T PRK07480 192 GGDMTPEEFGLAAARQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTGEW 271 (456)
T ss_pred ccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcch
Confidence 11122 36676555 4455689999999999999999999999999999999999999999999999 99999
Q ss_pred chhhccCCCCchhhhhhhcCCCC-cEEEEEecHHHHHhhc-CCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHHHHH-H
Q 011856 298 GAQEYFGVTPDLTTLGKIIGGGL-PVGAYGGRRDIMEMVA-PAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYL-N 374 (476)
Q Consensus 298 ~~~~~~g~~pDi~t~sK~lg~G~-~iG~~~~~~~i~~~l~-~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~-~ 374 (476)
|+++++|+.||++||||+++||+ |+|++++++++++.+. ..+...|++||++||++|++++++|+.++++++.+++ +
T Consensus 272 ~a~~~~gv~PDiv~~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~~~l~~~~~~ 351 (456)
T PRK07480 272 FGSQHFGIKPDLMTIAKGLTSGYIPMGAVGVGDRVAEVLIEEGGEFNHGFTYSGHPVAAAVALANLRILRDEGIVERVRD 351 (456)
T ss_pred hhhhhcCCCCCeeeeehhhccCCccceEEEEcHHHHHHHhcCCCCcccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 99999999999999999999995 9999999999999883 2234568899999999999999999999989999999 6
Q ss_pred HHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCCcceEE--e
Q 011856 375 KITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--S 452 (476)
Q Consensus 375 ~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~--~ 452 (476)
+++++|+++|+++ .+++++.+++|.|+|++++|.++.... .... ........+...|+++||++.+.+ +.+++ +
T Consensus 352 ~~g~~l~~~l~~l-~~~~~i~~vrG~Glm~gie~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~Gll~~~~~-~~l~~~Pp 427 (456)
T PRK07480 352 DTGPYLQKRLREL-ADHPLVGEVRGVGLVGAIELVKDKATR-ERFE-AGGGVGTICRDHCFANGLIMRAVG-DRMIISPP 427 (456)
T ss_pred HHHHHHHHHHHHh-hcCCCeeeEEeecceEEEEEecccccc-ccCc-chhhHHHHHHHHHHHCCcEEeecC-CEEEEECC
Confidence 9999999999995 568889999999999999997542210 0000 001223567788999999998754 34444 6
Q ss_pred CCCcHHHHHHHHHHHHHHHHHh
Q 011856 453 LAHSSDDIQHTITAAEKVKMRF 474 (476)
Q Consensus 453 ~~~t~e~i~~~~~~l~~~~~~~ 474 (476)
+.+|++|||+++++|++++.++
T Consensus 428 l~it~~eid~~~~~l~~al~~~ 449 (456)
T PRK07480 428 LVITHAEIDELVEKARKALDAT 449 (456)
T ss_pred CCCCHHHHHHHHHHHHHHHHHH
Confidence 8889999999999999999875
No 37
>PRK07036 hypothetical protein; Provisional
Probab=100.00 E-value=3.3e-64 Score=508.82 Aligned_cols=390 Identities=21% Similarity=0.286 Sum_probs=318.5
Q ss_pred CCeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcC---CCC-CCCHHHHHHHHHHHhhCC-CC
Q 011856 81 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT---SFG-APCLLENVLAEMVISAVP-SI 155 (476)
Q Consensus 81 ~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~---~~~-~~~~~~~~la~~l~~~~~-~~ 155 (476)
.|+++++++|+|+||+|||+||||.+++++.++||+||+|.+|+.+|+++.. .++ .+++...+|+++|.+..| +.
T Consensus 33 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~ 112 (466)
T PRK07036 33 GSLVIVEAEGIYVTDADGRRYLDGIGGMWCVNVGYGREEMADAIADQARRLPYYTPFGDMTNAPAAELAAKLAELAPGDL 112 (466)
T ss_pred CCceEEeCceeEEEECCCCEEEECcccHHhhcCCCCCHHHHHHHHHHHHhCcccccccccCCHHHHHHHHHHHHhCCCCc
Confidence 4899999999999999999999999999999999999999999999999852 233 678899999999999998 47
Q ss_pred CeEEEeCCHHHHHHHHHHHHHhc------cCCceEEEEeCCCCCCchhHHhhcCCCCccCCC-CCCCCCCCCCCCceeec
Q 011856 156 EMVRFVNSGTEACMGVLRLARAF------TGRERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTA 228 (476)
Q Consensus 156 e~v~~~~sGseA~~~al~~ar~~------~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~ 228 (476)
++|+|+|||+||++.|+|+||.+ +++.+||.++++|||++..++..++.......+ +...++.....++.+..
T Consensus 113 ~~v~f~~sGseAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 192 (466)
T PRK07036 113 NHVFLTTGGSTAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRR 192 (466)
T ss_pred CEEEEeCCchHHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCccccc
Confidence 89999999999999999999988 457899999999999998888776653222111 10111100000111111
Q ss_pred cCC---------CHHHHHHHHhc-CCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccccc
Q 011856 229 PFN---------DVSALENLFEN-NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG 297 (476)
Q Consensus 229 ~~~---------d~~~le~~l~~-~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~ 297 (476)
+.+ .++.+++.+.. +++++++||+||+++++|.+.|+++|+++|+++|++||+++|+|||+||| |+|.+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~ 272 (466)
T PRK07036 193 PAGMSEAAFCDFLVDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLGHF 272 (466)
T ss_pred ccCCChHHHHHHHHHHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCchh
Confidence 111 13456666653 45789999999999999999999999999999999999999999999999 99988
Q ss_pred chhh-ccCCCCchhhhhhhcCCC-CcEEEEEecHHHHHhhcCC---C-CccccCCCCCcHHHHHHHHHHHHHhcCCCHHH
Q 011856 298 GAQE-YFGVTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAPA---G-PMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYE 371 (476)
Q Consensus 298 ~~~~-~~g~~pDi~t~sK~lg~G-~~iG~~~~~~~i~~~l~~~---~-~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~ 371 (476)
|+.+ ++|+.|||+|+||++++| +|+|++++++++++.+... . .+.+++||++||++|++++++|+.++++++.+
T Consensus 273 ~~~~~~~gv~PDivt~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~Le~i~~~~l~~ 352 (466)
T PRK07036 273 FASEAVFGIQPDIITFAKGLTSGYQPLGAVIISERLLDVISGPNAKGNVFTHGFTYSGHPVACAAALKNIEIMEREGLCE 352 (466)
T ss_pred hhhhhhcCCCCCEEEEccccccCccccEEEEEcHHHHHHHhcccCcCcccccCCCCCCCHHHHHHHHHHHHHHHhCCHHH
Confidence 8887 799999999999999999 5999999999999988632 1 24577899999999999999999998899999
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCCcceEE
Q 011856 372 YLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT 451 (476)
Q Consensus 372 ~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~ 451 (476)
++++++++|+++|+++ .+++.+.++++.|+|++++|.++.... +....+......+...|+++||++.+.+ +.+++
T Consensus 353 ~~~~~g~~l~~~L~~l-~~~~~v~~vrG~Gl~~~ve~~~~~~~~--~~~~~~~~~~~~~~~~~~~~Gvl~~~~~-~~~~l 428 (466)
T PRK07036 353 HVREVGPYFEERLASL-RELPLVGDVRGDHLMACVECVADKGSK--ALLPEDIAIGQRIDRHCQERGLLVRPLE-HLCVL 428 (466)
T ss_pred HHHHHHHHHHHHHHHh-ccCCCEEEEEeeceEEEEEEccCcccc--CCCCchhHHHHHHHHHHHHCCcEEeecC-CEEEE
Confidence 9999999999999876 568899999999999999997543211 0011223455678889999999998765 34444
Q ss_pred --eCCCcHHHHHHHHHHHHHHHHHh
Q 011856 452 --SLAHSSDDIQHTITAAEKVKMRF 474 (476)
Q Consensus 452 --~~~~t~e~i~~~~~~l~~~~~~~ 474 (476)
++++|++|||+++++|+++++++
T Consensus 429 ~Ppl~it~~~id~~~~~l~~al~~~ 453 (466)
T PRK07036 429 SPPLIITRAQIDEIVAILRAAIEET 453 (466)
T ss_pred eCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 68899999999999999998765
No 38
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=6.5e-64 Score=502.88 Aligned_cols=394 Identities=28% Similarity=0.442 Sum_probs=333.6
Q ss_pred HHHHHHHHhhhCCCCCCCccccccccCCCCeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcC
Q 011856 53 SEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT 132 (476)
Q Consensus 53 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~ 132 (476)
+.+++++.+++++.++.+. +|+++++++|+|+||.|||+||||.+++++.++||+||+|.+|+++|++++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~---------~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~ 73 (421)
T PRK06777 3 NSELNQRRLEATPRGVGVM---------CDFYAERAENATLWDVEGREYIDFAAGIAVLNTGHRHPKVVAAVRQQLDQFT 73 (421)
T ss_pred hHHHHHHHHHhcccccCcC---------CCeeEEeeecCEEEeCCCCEEEEcccCHHhhccCCCCHHHHHHHHHHHhhcc
Confidence 4567778788888776532 3899999999999999999999999999999999999999999999999865
Q ss_pred CCC---CCCHHHHHHHHHHHhhCC--CCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCC-
Q 011856 133 SFG---APCLLENVLAEMVISAVP--SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGV- 206 (476)
Q Consensus 133 ~~~---~~~~~~~~la~~l~~~~~--~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~- 206 (476)
+.. .+++...+|+++|++..| +.++++|++||+||++.|+|+||.++++.+|+.++++|||++.+++..++...
T Consensus 74 ~~~~~~~~~~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~ 153 (421)
T PRK06777 74 HTAYQIVPYASYVTLAERINALAPIDGPAKTAFFTTGAEAVENAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAP 153 (421)
T ss_pred cccccccCChHHHHHHHHHHHhCCCCCCceEEEeCCcHHHHHHHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcc
Confidence 332 367888999999999987 36899999999999999999999999999999999999999999998776421
Q ss_pred ccCCC-CCCCCCCCCCCCceeeccCC----------CHHHHHHHHhc--CCCCeEEEEEcccCCCCCcccCCHHHHHHHH
Q 011856 207 ATLGL-PDSPGVPKGATYETLTAPFN----------DVSALENLFEN--NKGEIAAIILEPVVGNSGFIAPKPDFLNAIR 273 (476)
Q Consensus 207 ~~~~~-~~~~~~~~~~~~~~~~~~~~----------d~~~le~~l~~--~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~ 273 (476)
....+ |.. ..+..++++ +++.+++.+++ +++++++||+||+++++|...++++|+++|+
T Consensus 154 ~~~~~~~~~--------~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~ 225 (421)
T PRK06777 154 YKVGFGPFP--------GSIFHALYPNELHGVSVEEALSSVERLFKADIAPDQVAAILLEPIQGEGGFNVAPPEFMSALR 225 (421)
T ss_pred cccCCCCCC--------CCcEEcCCCccccCcCHHHHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHH
Confidence 11111 111 112333332 36778888864 4568999999999999999999999999999
Q ss_pred HHHHHhCCEEEEeccccCc-cccccchhhccCCCCchhhhhhhcCCCCcEEEEEecHHHHHhhcCCCCccccCCCCCcHH
Q 011856 274 RITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPL 352 (476)
Q Consensus 274 ~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pDi~t~sK~lg~G~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~ 352 (476)
++|++||++||+||||+|| |+|.+++++++++.||++|+||++++|+|+||+++++++++.+.+ ..+.+|+++||+
T Consensus 226 ~lc~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~pDiv~~sK~l~~G~pigav~~~~~i~~~~~~---~~~~~T~~~~p~ 302 (421)
T PRK06777 226 TLCDEHGILLIADEVQTGFARTGKLFAMEYYDVKPDLITMAKSLGGGMPISAVVGRAEVMDAPAP---GGLGGTYAGNPL 302 (421)
T ss_pred HHHHHcCCEEEEechhhCCccCCchhhhhhcCCCCCEEeeehhhcCCCceEEEEEcHHHHhccCC---CCCCCCCCcCHH
Confidence 9999999999999999999 999888889999999999999999999999999999999998863 346789999999
Q ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHH
Q 011856 353 AMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYR 432 (476)
Q Consensus 353 ~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (476)
+|++++++|+.++++++.+++++++++++++|+++..+++.+.++++.|+|+++++..+.. ..++......+..
T Consensus 303 ~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G~~~~i~~~~~~~------~~~~~~~~~~l~~ 376 (421)
T PRK06777 303 AVAAALAVLDVIAEEKLCQRALILGAHLVEVLEKAKASCPAIVDIRARGSMVAVEFNDPQT------GKPSPEFTRQYQR 376 (421)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhCCCeEEecCceEEEEEEEecCcc------CCccHHHHHHHHH
Confidence 9999999999998899999999999999999999988888899999999999999864211 1123345567788
Q ss_pred HHHHCCeEeccCCC--cceEE--eCCCcHHHHHHHHHHHHHHHH
Q 011856 433 GMLEEGVYFAPSQF--EAGFT--SLAHSSDDIQHTITAAEKVKM 472 (476)
Q Consensus 433 ~l~~~Gv~~~~~~~--~~~~~--~~~~t~e~i~~~~~~l~~~~~ 472 (476)
.|+++||++.+++. +.+++ +++++++++++++++|++++.
T Consensus 377 ~~~~~Gv~i~~~~~~g~~lr~~ppl~i~~~~i~~~~~~l~~~l~ 420 (421)
T PRK06777 377 QALEEGLLLLSCGVHGNVIRFLYPLTIPDAQFSKALNILTRLLA 420 (421)
T ss_pred HHHhCCeEEeecCCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Confidence 88999999988652 35665 578999999999999998874
No 39
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=6.6e-64 Score=505.65 Aligned_cols=383 Identities=22% Similarity=0.292 Sum_probs=319.8
Q ss_pred CeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcCCC--CCCCHHHHHHHHHHHhhCCC-CCeE
Q 011856 82 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSF--GAPCLLENVLAEMVISAVPS-IEMV 158 (476)
Q Consensus 82 p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~--~~~~~~~~~la~~l~~~~~~-~e~v 158 (476)
|+++++++|+|+||.|||+||||.++ ++.++||+||+|++|+.+|+++.... .+.++...+|+++|++.+|+ .+++
T Consensus 55 ~~~i~~a~G~~l~D~dG~~ylD~~g~-~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v 133 (459)
T PRK06082 55 LDVLASAEGIYIEDVDGKKYMDFHGN-NVHQLGYGHPHVIEKVKEQMAKLPFSPRRFTNETAIECAEKLTEIAGGELNRV 133 (459)
T ss_pred CceEEeeeeeEEEECCCCEEEEcccH-hhcccCCCCHHHHHHHHHHHHhCCCccCccCCHHHHHHHHHHHHhCCCCCCEE
Confidence 78999999999999999999999854 77899999999999999999985322 35788999999999999984 5899
Q ss_pred EEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCC-CCCCCCCCCCCCceeeccCCC-----
Q 011856 159 RFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTAPFND----- 232 (476)
Q Consensus 159 ~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d----- 232 (476)
+|++||+||++.|+|+||.++++.+||.+.++|||++..++..++.......+ |..+++........+..|+++
T Consensus 134 ~f~~sGseAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (459)
T PRK06082 134 LFAPGGTSAIGMALKLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSD 213 (459)
T ss_pred EECCCcHHHHHHHHHHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHH
Confidence 99999999999999999999999999999999999999888877653332111 222222222222233344544
Q ss_pred ---HHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccchhhccCCCCc
Q 011856 233 ---VSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPD 308 (476)
Q Consensus 233 ---~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pD 308 (476)
++.+++++++. +++++||+||++++ |.+.|+++||++|+++|++||++||+|||++|| |+|.+|+++++|+.||
T Consensus 214 ~~~~~~l~~~i~~~-~~vAavIvEPv~g~-g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~fa~e~~gv~PD 291 (459)
T PRK06082 214 VHYADYLEYVIEKE-GGIGAFIAEAVRNT-DVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTGEWFTHQAYGIEPD 291 (459)
T ss_pred HHHHHHHHHHHhcC-CCEEEEEECCccCC-CCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHhHhhCCCCC
Confidence 35688888753 47999999999988 477889999999999999999999999999999 9999999999999999
Q ss_pred hhhhhhhcCCC-CcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Q 011856 309 LTTLGKIIGGG-LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDA 387 (476)
Q Consensus 309 i~t~sK~lg~G-~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~ 387 (476)
++|+||++++| +|+|++++++++++.+.. ...+ +||++||++|++++++|+.++++++.+++++++++|+++|+++
T Consensus 292 iv~~gKgl~gG~~P~~av~~~~~i~~~~~~--~~~~-~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l 368 (459)
T PRK06082 292 ILCIGKGLGGGLVPIAAMITKDKYNTAAQI--SLGH-YTHEKSPLGCAAALATIEVIEQEGLLEKVKADSQFMRERLLEM 368 (459)
T ss_pred EEEecccccCCCCcceEEEEcHHHHhhccC--CCCC-CCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 99999999998 599999999998765431 2334 7999999999999999999988899999999999999999999
Q ss_pred hhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCCcceEE--eCCCcHHHHHHHHH
Q 011856 388 GKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTIT 465 (476)
Q Consensus 388 ~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~--~~~~t~e~i~~~~~ 465 (476)
..+++.+.+++|.|+|++++|..+... ..++......+...|+++||++.+.+.+.+++ ++++|++|||++++
T Consensus 369 ~~~~~~i~~vrG~Gl~~~ve~~~~~~~-----~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~i~~~Ppl~it~~eid~~~~ 443 (459)
T PRK06082 369 KAKYPLIGDVRGIGLLWGVELVTDRHT-----KERAYDEAEAVLYRCLNNGLSFKVSQGNVIQLSPPLIITREELTQALA 443 (459)
T ss_pred HhhCCCeeeeeeccceeEEEEccCccc-----cCccHHHHHHHHHHHHhCCCEEEecCCCEEEEeCCCccCHHHHHHHHH
Confidence 888999999999999999999753211 11233445678889999999998765455555 58899999999999
Q ss_pred HHHHHHHHhh
Q 011856 466 AAEKVKMRFL 475 (476)
Q Consensus 466 ~l~~~~~~~~ 475 (476)
++++++.++.
T Consensus 444 ~l~~~l~~~~ 453 (459)
T PRK06082 444 ILEEAIAKIC 453 (459)
T ss_pred HHHHHHHHHh
Confidence 9999998753
No 40
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.3e-65 Score=460.57 Aligned_cols=392 Identities=26% Similarity=0.337 Sum_probs=334.9
Q ss_pred ChhHHHHHHHHhhhCCCCCCCccccccccCCCCeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHH
Q 011856 50 LKKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMK 129 (476)
Q Consensus 50 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~ 129 (476)
+..|++++++..++-.+.. .+.|+++.+++|+++||.+|++|+||.+++++.+.||+||.|.+++.+|.+
T Consensus 20 ~~aS~~~~~~E~k~~ahny----------hpLpvvf~ka~g~~vwD~eGk~ylDflsaysaVnqGhchpki~~aLqeq~~ 89 (427)
T KOG1402|consen 20 TTASQQIMERENKYGAHNY----------HPLPVVFSKAKGSRVWDPEGKEYLDFLSAYSAVNQGHCHPKIIKALQEQAD 89 (427)
T ss_pred ccchhhhhchhhhcccccC----------CcCceEEEecCCcEEECCCccchhhhhhhhhhcccCCCCHHHHHHHHHHHh
Confidence 4445566666666543322 234999999999999999999999999999999999999999999999999
Q ss_pred hcCC--CCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhcc--------CCceEEEEeCCCCCCchhHH
Q 011856 130 KGTS--FGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFT--------GRERIIKFEGCYHGHADPFL 199 (476)
Q Consensus 130 ~~~~--~~~~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~--------~~~~ii~~~~~yhg~~~~~~ 199 (476)
+.+. ..+.+...-++++.+.+++ +.++|+-.|+|.||++.|+++||.+. .+.+|+...++|||.+.+++
T Consensus 90 kLtlssrafYnd~~~~f~~~vt~lf-~~~kvlpmnTGaEa~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ai 168 (427)
T KOG1402|consen 90 KLTLSSRAFYNDVLGEFAEYVTKLF-GYDKVLPMNTGAEAVETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAI 168 (427)
T ss_pred HhhhhhHHHhhhhHHHHHHHHHHhc-CcceeeecccchhHHHHHHHHHHHHHHhhccCCccceeEEEecccccCceeeeE
Confidence 8543 2346777789999999999 78999999999999999999999541 34456777999999999998
Q ss_pred hhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHh
Q 011856 200 VKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKEN 279 (476)
Q Consensus 200 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~ 279 (476)
+++...-.. .++.......+..+||+|.++|+.+|+. +.++++++||+|++.|++.|+++||+++++||++|
T Consensus 169 s~s~d~ds~------~~fgp~~P~~~~~v~Y~d~eale~~l~~--~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtky 240 (427)
T KOG1402|consen 169 SLSTDPDSW------DGFGPFLPGVVDKVPYGDAEALEVALKS--PNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKY 240 (427)
T ss_pred EecCCcchh------hccCCCCCCcceeeccCCHHHHHHHhcC--CCeeEEEeeccccccceEeCCchhHHHHHHHHHhh
Confidence 887764211 1111112223678899999999999986 58999999999999999999999999999999999
Q ss_pred CCEEEEeccccCc-cccccchhhccCCCCchhhhhhhcCCC-CcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHH
Q 011856 280 GALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAG 357 (476)
Q Consensus 280 g~llI~DEv~~g~-r~g~~~~~~~~g~~pDi~t~sK~lg~G-~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa 357 (476)
++++|.||+|||+ |+|+++++++-++.||++.|+|+++|| +|++++++++++|-.+. +..|++||++||++|+++
T Consensus 241 nvl~I~DEvQTGl~RTGk~la~d~env~PDivilgKalSGG~~Pvsavl~~~~im~~~~---pgeHgsTyggNpLg~~va 317 (427)
T KOG1402|consen 241 NVLLIADEVQTGLARTGKLLACDYENVRPDIVILGKALSGGVYPVSAVLADDDIMLNIK---PGEHGSTYGGNPLGCAVA 317 (427)
T ss_pred cEEEEehhhhhcccccCcEEEeehhhcCCCeEEEeccccCCeeeeEEEEecHHHHhccC---CCccccccCCChHHHHHH
Confidence 9999999999999 999999999999999999999999999 69999999999998877 567999999999999999
Q ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcC-CceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHH
Q 011856 358 IHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAG-HAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLE 436 (476)
Q Consensus 358 ~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 436 (476)
+|+|+++.++++.++.++++..|+.+|+++..+.+ ++.+|||+|++.++++...+. ....+..++-.|.+
T Consensus 318 iAalevi~eekL~era~~lG~~l~~~L~~l~~~~p~~v~~VRGrGl~~ai~i~~~~~---------~~~~aw~~cl~lk~ 388 (427)
T KOG1402|consen 318 IAALEVIVEEKLVERAAKLGEILRDQLNKLQKKFPHVVKEVRGRGLLNAIVINPSKT---------SGQDAWDVCLALKE 388 (427)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhheeeccceEEEEEeccccc---------cchhHHHHHHcccc
Confidence 99999999999999999999999999999988775 567899999999999964321 22344667788889
Q ss_pred CCeEeccCCCcceEE--eCCCcHHHHHHHHHHHHHHHH
Q 011856 437 EGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAEKVKM 472 (476)
Q Consensus 437 ~Gv~~~~~~~~~~~~--~~~~t~e~i~~~~~~l~~~~~ 472 (476)
+|++..|...+.+|+ ++.++++|+++.++++++.+.
T Consensus 389 ~g~LAkptH~~IiRfaPPL~I~e~dl~eg~e~i~k~i~ 426 (427)
T KOG1402|consen 389 NGLLAKPTHGNIIRFAPPLVISEEDLREGIEAIEKTIA 426 (427)
T ss_pred cccccCCCCCCeEEecCCcccCHHHHHHHHHHHHHHhc
Confidence 999999887666776 799999999999999998764
No 41
>PRK06105 aminotransferase; Provisional
Probab=100.00 E-value=8.3e-64 Score=505.63 Aligned_cols=390 Identities=20% Similarity=0.237 Sum_probs=318.9
Q ss_pred CCeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcC---CC-CCCCHHHHHHHHHHHhhCC-CC
Q 011856 81 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT---SF-GAPCLLENVLAEMVISAVP-SI 155 (476)
Q Consensus 81 ~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~---~~-~~~~~~~~~la~~l~~~~~-~~ 155 (476)
.|+++++++|+|+||.|||+||||.+++++.++||+||+|.+|+.+|++++. .+ .+.++...+|+++|++.+| +.
T Consensus 30 ~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~ 109 (460)
T PRK06105 30 GPLVIERGEGIYVYDDAGKRYIEGMAGLWSVALGFSEQRLVEAAARQMKKLPFYHTFSHKSHGPVIDLAEKLVAMAPVPM 109 (460)
T ss_pred CCceEEeeeEEEEEECCCCEEEEcchhHHhccCCCCCHHHHHHHHHHHHhCCCeecccccCCHHHHHHHHHHHHhCCCCC
Confidence 4899999999999999999999999999999999999999999999999853 22 2568888999999999998 46
Q ss_pred CeEEEeCCHHHHHHHHHHHHHhc------cCCceEEEEeCCCCCCchhHHhhcCCCCccCCC-CCCCCCCCCCCCceeec
Q 011856 156 EMVRFVNSGTEACMGVLRLARAF------TGRERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTA 228 (476)
Q Consensus 156 e~v~~~~sGseA~~~al~~ar~~------~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~ 228 (476)
++|+|++||+||+++|+|+||.+ +++.+||.++++|||++..++..++.......+ +...++.....++...+
T Consensus 110 ~~v~f~~SGseAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~ 189 (460)
T PRK06105 110 SKVFFTNSGSEANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYRF 189 (460)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCccccc
Confidence 89999999999999999999866 468899999999999998887766643221111 11111110000011111
Q ss_pred cC----------CCHHHHHHHHhc-CCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccc
Q 011856 229 PF----------NDVSALENLFEN-NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAY 296 (476)
Q Consensus 229 ~~----------~d~~~le~~l~~-~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~ 296 (476)
+. ..++++|+++.. +++++++||+||+++++|.+.++++||++|+++|++||++||+||||||| |+|.
T Consensus 190 ~~~~~~~~~~~~~~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~ 269 (460)
T PRK06105 190 GLPGESEEAFATRLANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGN 269 (460)
T ss_pred ccCCCChHHHHHHHHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCch
Confidence 00 024677888753 34689999999999999999999999999999999999999999999999 9999
Q ss_pred cchhhccCCCCchhhhhhhcCCC-CcEEEEEecHHHHHhhcCC----CCccccCCCCCcHHHHHHHHHHHHHhcCCCHHH
Q 011856 297 GGAQEYFGVTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAPA----GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYE 371 (476)
Q Consensus 297 ~~~~~~~g~~pDi~t~sK~lg~G-~~iG~~~~~~~i~~~l~~~----~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~ 371 (476)
+|+++++|+.|||+|+||++++| +|+|++++++++++.+... +...|.+||++||++|++++++|+.++++++.+
T Consensus 270 ~f~~~~~~v~PDi~~~gK~lggG~~P~~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~i~~~~l~~ 349 (460)
T PRK06105 270 MFGCETFGIKPDILVMSKQLSSSYQPLSAVLMNEKVYDPIADESGKIGTFGHGFTASGHPVAAAVALENLAIIEERDLVG 349 (460)
T ss_pred hhhHHhcCCCCCeeeeecccccCcccceEEEEcHHHHHHHhcccccCcccccCCCCCCCHHHHHHHHHHHHHHHhccHHH
Confidence 99999999999999999999998 6999999999999987632 123478899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCCcceEE
Q 011856 372 YLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT 451 (476)
Q Consensus 372 ~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~ 451 (476)
++++++++|+++|+++ .+++.+.++++.|+|++++|..+.... ... .+.......+...++++||++.+.+ +.+++
T Consensus 350 ~v~~~g~~l~~~L~~l-~~~~~v~~vrG~Gl~~gie~~~~~~~~-~~~-~~~~~~a~~i~~~~~~~Gvl~~~~g-~~i~l 425 (460)
T PRK06105 350 NAAERGARLQARLRAL-ADHPLVGEVRGVGLIAAVELVADKATK-TPF-EPPGKVGARANAAAHEHGVISRAMG-DTLAF 425 (460)
T ss_pred HHHHHHHHHHHHHHHh-hcCCCeEEEEecceEEEEEEecCcccC-CCC-CchhHHHHHHHHHHHHCCeEEEecC-CEEEE
Confidence 9999999999999998 778999999999999999996432110 000 0112234678889999999998864 34554
Q ss_pred --eCCCcHHHHHHHHHHHHHHHHHh
Q 011856 452 --SLAHSSDDIQHTITAAEKVKMRF 474 (476)
Q Consensus 452 --~~~~t~e~i~~~~~~l~~~~~~~ 474 (476)
++++|++|||+++++|+++++++
T Consensus 426 ~Ppl~it~~eid~~~~~l~~~l~~~ 450 (460)
T PRK06105 426 CPPLIITAAQVDEMVDRFGRALDDV 450 (460)
T ss_pred ECCCccCHHHHHHHHHHHHHHHHHH
Confidence 68899999999999999999875
No 42
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=100.00 E-value=1.2e-63 Score=505.78 Aligned_cols=410 Identities=27% Similarity=0.404 Sum_probs=335.4
Q ss_pred cCChhHHHHHHHHhhhCCCCCCCccccccccCCCCeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHH
Q 011856 48 FTLKKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGET 127 (476)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~ 127 (476)
...++|++++++++++++.|+.+. .|+++++++|+|+||.|||+||||.+++++.++||+||+|.+|+++|
T Consensus 12 ~~~~~s~~~~~~~~~~~~~~~~~~---------~~~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q 82 (451)
T PRK06918 12 IPGPKAASLLERRQNIVPKGVSNG---------IPTFAQSANGALVTDVDGNQYIDFAGAIGTINVGHSHPKVKEALHKQ 82 (451)
T ss_pred CCCCCHHHHHHHHHHhhccccccC---------CCceEEeccccEEEeCCCCEEEEcCCchhhcCCCCCCHHHHHHHHHH
Confidence 335778899999999998876432 37899999999999999999999999999999999999999999999
Q ss_pred HHhcCCCC---CCCHHHHHHHHHHHhhCCCC--CeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhc
Q 011856 128 MKKGTSFG---APCLLENVLAEMVISAVPSI--EMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKA 202 (476)
Q Consensus 128 l~~~~~~~---~~~~~~~~la~~l~~~~~~~--e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~ 202 (476)
++++.+.+ +.++...+|+++|++..|+. ++|+|+|||+||++.|+|+||.++++.+||.++++|||++.+++..+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~ 162 (451)
T PRK06918 83 VDQYIHTGFNVMMYEPYIELAEKLAALAPGSFDKKVLFLNSGAEAVENAVKIARKYTKRQGIISFSRGFHGRTLMTMTMT 162 (451)
T ss_pred HHhccCccccccccHHHHHHHHHHHHhCCCCCCCEEEEcCCcHHHHHHHHHHHHHHhCCCcEEEECCCcCccchhhhhhc
Confidence 99865332 35788999999999999843 69999999999999999999999999999999999999999999776
Q ss_pred CCC-CccCCC-CCCCCCCCCCCCceeeccCC-------C--HHHHHHHHhc--CCCCeEEEEEcccCCCCCcccCCHHHH
Q 011856 203 GSG-VATLGL-PDSPGVPKGATYETLTAPFN-------D--VSALENLFEN--NKGEIAAIILEPVVGNSGFIAPKPDFL 269 (476)
Q Consensus 203 g~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~-------d--~~~le~~l~~--~~~~~a~vi~ep~~~~~G~i~~~~~~l 269 (476)
+.. .....+ |..+++......+.+..+.. + ++.+++.+.. +++++++||+||+++++|.+.|+++|+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l 242 (451)
T PRK06918 163 SKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFV 242 (451)
T ss_pred CCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHHHHHHHHhhcCCCceEEEEECcccCCCCCccCCHHHH
Confidence 642 111111 11111100000001111110 1 2345555531 346899999999999999999999999
Q ss_pred HHHHHHHHHhCCEEEEeccccCc-cccccchhhccCCCCchhhhhhhcCCCCcEEEEEecHHHHHhhcCCCCccccCCCC
Q 011856 270 NAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLS 348 (476)
Q Consensus 270 ~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pDi~t~sK~lg~G~~iG~~~~~~~i~~~l~~~~~~~~~~t~~ 348 (476)
++|+++|++||++||+||||+|| |+|.+++++++++.||+++|||++++|+|+||+++++++++.+. +..+.+|++
T Consensus 243 ~~l~~l~~~~gillI~DEV~tg~gr~g~~~a~~~~~v~pDi~t~sK~l~~G~pig~v~~~~~i~~~~~---~~~~~~T~~ 319 (451)
T PRK06918 243 QEVRNICSEHGILFVADEIQTGFARTGKYFAIEHFDVVPDLITVSKSLGAGVPISGVIGRKEIMDESA---PGELGGTYA 319 (451)
T ss_pred HHHHHHHHHcCCEEEEeccccCcCccCceehhHhcCCCCCEEeeehhhcCCCccEEEEEcHHHHhccC---CCCcCcCCC
Confidence 99999999999999999999999 99988888899999999999999999999999999999999876 345788999
Q ss_pred CcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHH
Q 011856 349 GNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFA 428 (476)
Q Consensus 349 ~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~ 428 (476)
+||++|++++++|+.++++++.+++++++++++++|+++..+++.+.++++.|+|+++++..++. ...++.....
T Consensus 320 g~~l~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~l~~l~~~~~~~~~vrg~G~~~~~~~~~~~~-----~~~~~~~~~~ 394 (451)
T PRK06918 320 GSPLGCAAALAVLDIIEKENLNDRAIELGKVVMNRFEEMKNKYNCIGDVRGLGAMCAFELVQDRK-----TKEPDKTLTA 394 (451)
T ss_pred cCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhCCCceeeccceeEEEEEEccCCC-----cCCCcHHHHH
Confidence 99999999999999998889999999999999999999877788888999999999999863221 1123445567
Q ss_pred HHHHHHHHCCeEeccCCC--cceEE--eCCCcHHHHHHHHHHHHHHHHHh
Q 011856 429 RFYRGMLEEGVYFAPSQF--EAGFT--SLAHSSDDIQHTITAAEKVKMRF 474 (476)
Q Consensus 429 ~~~~~l~~~Gv~~~~~~~--~~~~~--~~~~t~e~i~~~~~~l~~~~~~~ 474 (476)
.+.+.|+++||++.+++. +.+++ ++++|+++|++++++|++++.++
T Consensus 395 ~l~~~~~~~Gvlv~~~~~~~~~lrl~p~l~~t~~~id~~l~~l~~~l~~~ 444 (451)
T PRK06918 395 NICKEANKRGLLLLSAGTYGNVIRVLMPLVITDEQLEEGLTIIEESLQAC 444 (451)
T ss_pred HHHHHHHHCCeEEeecCCCCCEEEEECCCccCHHHHHHHHHHHHHHHHHH
Confidence 888899999999988642 45665 56799999999999999999765
No 43
>PRK12403 putative aminotransferase; Provisional
Probab=100.00 E-value=1.3e-63 Score=504.26 Aligned_cols=391 Identities=23% Similarity=0.261 Sum_probs=316.4
Q ss_pred CCeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcCC----CCCCCHHHHHHHHHHHhhCCC-C
Q 011856 81 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTS----FGAPCLLENVLAEMVISAVPS-I 155 (476)
Q Consensus 81 ~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~----~~~~~~~~~~la~~l~~~~~~-~ 155 (476)
.|+++.+++|+|+||.|||+||||.+++++.++||+||+|.+|+++|+++... ++.+++...+|+++|++.+|+ .
T Consensus 36 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~hp~v~~A~~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~ 115 (460)
T PRK12403 36 GPRVMVRGEGLHLWDNDGKRYLDGMSGLWCTNLGYGRKDLAAAAARQMEQLPYYNMFFHTTHPAVIELSELLFSLLPGHY 115 (460)
T ss_pred CCceEEeceeeEEEeCCCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhCCCeecccccCCHHHHHHHHHHHHhCCCCc
Confidence 38999999999999999999999999999999999999999999999998432 235678899999999999974 5
Q ss_pred CeEEEeCCHHHHHHHHHHHHHhcc---C---CceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceee--
Q 011856 156 EMVRFVNSGTEACMGVLRLARAFT---G---RERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLT-- 227 (476)
Q Consensus 156 e~v~~~~sGseA~~~al~~ar~~~---~---~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-- 227 (476)
++++|++||+||+++|+|+||.++ + +..|+.+.++|||++...+..++........+..+++........+.
T Consensus 116 ~~v~f~~SGseA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~ 195 (460)
T PRK12403 116 SHAIYTNSGSEANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANG 195 (460)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCcccccc
Confidence 899999999999999999999873 3 45677889999999999988877543221111111111000000111
Q ss_pred -----ccCCC--HHHHHHHHh-cCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccc
Q 011856 228 -----APFND--VSALENLFE-NNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGG 298 (476)
Q Consensus 228 -----~~~~d--~~~le~~l~-~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~ 298 (476)
.++++ +++|++.+. .+++++++||+||+++++|.+.|+++||++|+++|++||++||+||||+|| |+|.+|
T Consensus 196 ~~~~~~~~~~~~~~~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~ 275 (460)
T PRK12403 196 GELTPAEFGRRAALQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTGEWF 275 (460)
T ss_pred cCCChHHHHHHHHHHHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhh
Confidence 11111 356766653 345689999999999999999999999999999999999999999999999 999999
Q ss_pred hhhccCCCCchhhhhhhcCCCC-cEEEEEecHHHHHhhcCCC-CccccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHH-H
Q 011856 299 AQEYFGVTPDLTTLGKIIGGGL-PVGAYGGRRDIMEMVAPAG-PMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLN-K 375 (476)
Q Consensus 299 ~~~~~g~~pDi~t~sK~lg~G~-~iG~~~~~~~i~~~l~~~~-~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~-~ 375 (476)
+++++|+.|||+|+||++++|+ |+|++++++++++.+.... .+.|++||++||++|++++++|+.+++++++++++ +
T Consensus 276 a~e~~gv~PDiv~~gK~lggG~~Piga~v~~~~i~~~~~~~~~~~~~~~T~~gnPl~~Aaala~L~~i~~~~l~~~~~~~ 355 (460)
T PRK12403 276 AHEHFGFEPDTLSIAKGLTSGYVPMGGLVLSKRIAEALVEQGGVFAHGLTYSGHPVAAAVAIANLKALRDEGVVTRVKDD 355 (460)
T ss_pred hhhhcCCCCCeEEEcccccccccceEEEEECHHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 9999999999999999999995 9999999999999885322 34578899999999999999999999888999996 9
Q ss_pred HHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCCcceEE--eC
Q 011856 376 ITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SL 453 (476)
Q Consensus 376 ~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~--~~ 453 (476)
++++|++.|+++..+++++.++++.|+|++++|..+...+... .........+...++++|+++.+.+ ..+++ ++
T Consensus 356 ~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~gie~~~~~~~~~~~--~~~~~~~~~~~~~~~~~Gll~~~~~-~~~~l~Ppl 432 (460)
T PRK12403 356 TGPYLQRCLREVFGDHPLVGEVQGAGLVAALQFAEDKATRKRF--ANENDLAWRCRTIGFEEGVIIRSTL-GRMIMAPAL 432 (460)
T ss_pred HHHHHHHHHHHHHhcCCCEEeEeecceEEEEEEccCccccccc--cchhHHHHHHHHHHHhCCEEEEecC-CEEEEECCC
Confidence 9999999999998889999999999999999997542211100 0011224456778899999998653 23444 68
Q ss_pred CCcHHHHHHHHHHHHHHHHHh
Q 011856 454 AHSSDDIQHTITAAEKVKMRF 474 (476)
Q Consensus 454 ~~t~e~i~~~~~~l~~~~~~~ 474 (476)
++|++|+|+++++|++++.++
T Consensus 433 ~it~~eid~~~~~l~~al~~~ 453 (460)
T PRK12403 433 VAGRAEIDELVDKTRIAVDRT 453 (460)
T ss_pred CCCHHHHHHHHHHHHHHHHHH
Confidence 889999999999999999876
No 44
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=1.4e-63 Score=501.72 Aligned_cols=406 Identities=26% Similarity=0.370 Sum_probs=331.0
Q ss_pred HHHHHHHHhhhCCCCCCCccccccccCCCCeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcC
Q 011856 53 SEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT 132 (476)
Q Consensus 53 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~ 132 (476)
+.++.++.++++...... ..+|+++++++|+|+||.|||+||||.+++++.++||+||+|.+|+.+|++++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~--------~~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~ 74 (443)
T PRK08360 3 PLEIIERYSKVISPANRV--------TYYPLVPVKAENAKVWDIEGNEYIDFLSDAAVQNVGHNNPRVVKAIKEQTDKLI 74 (443)
T ss_pred HHHHHHHHHHhccccccc--------ccCCceEEecceeEEEECCCCEEEEccccHhhcccCCCCHHHHHHHHHHHHhcc
Confidence 456666666664432110 113899999999999999999999999999999999999999999999999864
Q ss_pred CCC---CCCHHHHHHHHHHHhhCCC-CCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCC-c
Q 011856 133 SFG---APCLLENVLAEMVISAVPS-IEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGV-A 207 (476)
Q Consensus 133 ~~~---~~~~~~~~la~~l~~~~~~-~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~-~ 207 (476)
+.. ..++...+|+++|++..|. .++|+|+|||+||++.|+|+||.++++.+|+.+.++|||++.+++..++... .
T Consensus 75 ~~~~~~~~~~~~~~la~~L~~~~p~~~~~v~f~~sGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~ 154 (443)
T PRK08360 75 HYTPIYGFPVEPLLLAEKLIEIAPGDNPKVSFGLSGSDANDGAIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPV 154 (443)
T ss_pred CccccccCcHHHHHHHHHHHHhCCCCCCEEEEcCCHHHHHHHHHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCccc
Confidence 332 3478889999999999984 5899999999999999999999999999999999999999999888766421 1
Q ss_pred cCCCCCCCCCCCCCCCceeeccC---------CCHHHHHHHHhc--CCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHH
Q 011856 208 TLGLPDSPGVPKGATYETLTAPF---------NDVSALENLFEN--NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRIT 276 (476)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~---------~d~~~le~~l~~--~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~ 276 (476)
...+....++......+.+..++ ++++.+++.+++ +++++++||+||+++++|.+.++++|+++|+++|
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~ 234 (443)
T PRK08360 155 RALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKFEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKIL 234 (443)
T ss_pred ccCCCCCCCcEEEeCCccccccccCchhhhHHHHHHHHHHHHHhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHH
Confidence 11110011110000111111111 235567777764 3468999999999999999999999999999999
Q ss_pred HHhCCEEEEeccccCc-cccccchhhccCCCCchhhhhhhcCCCCcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHH
Q 011856 277 KENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMT 355 (476)
Q Consensus 277 ~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pDi~t~sK~lg~G~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~a 355 (476)
++||++||+||+|+|| |+|.+++.+++++.||++|+||++++|+|+|++++++++++.+. ...+.+|+++||++|+
T Consensus 235 ~~~g~llI~DEv~~g~gr~G~~~a~~~~~~~pDiitlsK~l~~G~pigav~~~~~i~~~~~---~~~~~~T~~~~p~~~a 311 (443)
T PRK08360 235 DEHGILLVVDEVQSGLGRTGKWFAIEHFGVEPDIITLGKPLGGGLPISATIGRAEIMDSLP---PLAHAFTLSGNPVASA 311 (443)
T ss_pred HHcCCEEEEeccccCCCcCccchhhhhcCCCCCEEEecccccCCceeEEEEEcHHHHhhhc---CCCCCCCCCcCHHHHH
Confidence 9999999999999999 99988888889999999999999999999999999999999886 3446789999999999
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHH
Q 011856 356 AGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML 435 (476)
Q Consensus 356 aa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 435 (476)
+++++|+.++++++.+++++++++++++|+++..+++++.++++.|+|++++|.+++.. ..++......+...|+
T Consensus 312 aa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrg~Gl~~gie~~~~~~~-----~~~~~~~~~~~~~~l~ 386 (443)
T PRK08360 312 AALAVIEEIEEKNLLKRAEKLGNYTKKRLEEMKKKHELIGDVRGIGLMIGVDLVKDRET-----KERAYEEAAKVVWRAW 386 (443)
T ss_pred HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEEecCCcc-----cCccHHHHHHHHHHHH
Confidence 99999999988899999999999999999998888888999999999999999753211 1123344567889999
Q ss_pred HCCeEeccCCCcceEE--eCCCcHHHHHHHHHHHHHHHHHh
Q 011856 436 EEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAEKVKMRF 474 (476)
Q Consensus 436 ~~Gv~~~~~~~~~~~~--~~~~t~e~i~~~~~~l~~~~~~~ 474 (476)
++|+++.+...+.+++ ++.+|++|||+++++|+++++++
T Consensus 387 ~~Gi~~~~~~~~~lr~~P~l~~t~~~id~~~~~l~~~l~~~ 427 (443)
T PRK08360 387 ELGLIVTFFSGNVLRIQPPLTIEKEVLDEGLDILEEAIEDV 427 (443)
T ss_pred HCCeEEeecCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999998765566666 89999999999999999998764
No 45
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=3.1e-63 Score=494.48 Aligned_cols=372 Identities=26% Similarity=0.364 Sum_probs=325.1
Q ss_pred CCeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcCCCC--CCCHHHHHHHHHHHhhCCCCCeE
Q 011856 81 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFG--APCLLENVLAEMVISAVPSIEMV 158 (476)
Q Consensus 81 ~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~~--~~~~~~~~la~~l~~~~~~~e~v 158 (476)
.|+++.+++|+|+||+|||+||||.+++++.++||+||+|.+|+.+|+++..+.+ +.++...+|+++|.+..|..+++
T Consensus 22 ~~~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~la~~L~~~~~~~~~v 101 (408)
T PRK04612 22 RQVVLERGQGSRVWDDQGREYLDLAAGIAVCGLGHNDPDLVAALTEQAGKLWHTSNVFYSAPPLKLAEELVTASRFAEKV 101 (408)
T ss_pred CCceEEEeeeCEEEECCCCEEEEcCccHhhccCCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhhCCCCCEE
Confidence 4899999999999999999999999999999999999999999999999854433 45788899999999988766899
Q ss_pred EEeCCHHHHHHHHHHHHHhcc-------CCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCC
Q 011856 159 RFVNSGTEACMGVLRLARAFT-------GRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFN 231 (476)
Q Consensus 159 ~~~~sGseA~~~al~~ar~~~-------~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (476)
+|++||+||++.|+|+||.++ ++.+||.++++|||++.+++..++.......+.. ....+..+|++
T Consensus 102 ~f~~sGseA~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~-------~~~~~~~~~~~ 174 (408)
T PRK04612 102 FLCNSGTEANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEP-------LPGGFRYVDFN 174 (408)
T ss_pred EEcCchHHHHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCC-------CCCCceEcCCC
Confidence 999999999999999999883 3567999999999999999887775332211110 11235678999
Q ss_pred CHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccchhhccCCCCchh
Q 011856 232 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLT 310 (476)
Q Consensus 232 d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pDi~ 310 (476)
|++.++++++ ++++++||+||+++++|.+.++++|+++|+++|++||+++|+||||+|| |+|.+++..++++.||++
T Consensus 175 d~~~l~~~~~--~~~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~a~~~~~~~pdi~ 252 (408)
T PRK04612 175 DVEALEAAMA--GGDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGTLFAHWQEQVTPDIV 252 (408)
T ss_pred CHHHHHHhhC--CCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCchhhhhhcCCCCCEE
Confidence 9999999986 3589999999999999999999999999999999999999999999999 999888877889999999
Q ss_pred hhhhhcCCCCcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhh
Q 011856 311 TLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKK 390 (476)
Q Consensus 311 t~sK~lg~G~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 390 (476)
||||++++|+|+|++++++++++.+.. ..+.+||++||++|+++.++|+.++++++.+++++++++++++|+++..+
T Consensus 253 t~~K~l~~G~piga~~~~~~~~~~~~~---~~~~~t~~~~p~~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~l~~l~~~ 329 (408)
T PRK04612 253 TLAKALGGGFPIGAMLAGPKVAETMQF---GAHGTTFGGNPLAAAVARVALRKLASPQIAANVARQSAALRAGLEALNAE 329 (408)
T ss_pred EEcchhcCCCceEEEEECHHHHhhhcC---CCcCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999888763 35778999999999999999999988999999999999999999999888
Q ss_pred cCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCCcceEE--eCCCcHHHHHHHHHHHH
Q 011856 391 AGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAE 468 (476)
Q Consensus 391 ~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~--~~~~t~e~i~~~~~~l~ 468 (476)
++++.+++|.|+|+++++..+ .......+.+.|+++||++.+.+.+.+++ ++.+|++|+++++++|+
T Consensus 330 ~~~i~~vrg~Gl~~~i~~~~~-----------~~~~a~~i~~~l~~~Gvlv~~~g~~~lRl~Ppl~it~eeid~~l~~l~ 398 (408)
T PRK04612 330 FGVFAQVRGRGLMLGAVLAPA-----------HAGQAGAILDLAAEHGLLLLQAGPDVLRFVPALNLTDAELADGLARLR 398 (408)
T ss_pred CCCeeeeeccceEEEEEecCc-----------hhhHHHHHHHHHHHCCeEEeeCCCCEEEEcCCccCCHHHHHHHHHHHH
Confidence 899999999999999999632 11234678889999999998876666766 68999999999999999
Q ss_pred HHHHHhh
Q 011856 469 KVKMRFL 475 (476)
Q Consensus 469 ~~~~~~~ 475 (476)
+++.++.
T Consensus 399 ~~l~~~~ 405 (408)
T PRK04612 399 LALADYV 405 (408)
T ss_pred HHHHHHh
Confidence 9998753
No 46
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=5.7e-63 Score=499.52 Aligned_cols=384 Identities=28% Similarity=0.367 Sum_probs=322.0
Q ss_pred CeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcCCC---CCCCHHHHHHHHHHHhhCC-CCCe
Q 011856 82 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSF---GAPCLLENVLAEMVISAVP-SIEM 157 (476)
Q Consensus 82 p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~---~~~~~~~~~la~~l~~~~~-~~e~ 157 (476)
|+++++++|+|+||.|||+||||.++++++++||+||+|.+|+++|+++.... .+.++...+|+++|++.+| +.++
T Consensus 26 ~~~~~~~~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~~~~~~~ 105 (433)
T PRK08117 26 NLPVVKGEGCYYYGVDGKEYLDFTSGIAVANVGHRHPKVVQAIKEQADKLMHGPSGVIYYESILKLAEELAEITPGGLDC 105 (433)
T ss_pred CceEEeeeeeEEEeCCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCE
Confidence 48999999999999999999999999999999999999999999999885322 2467889999999999996 6789
Q ss_pred EEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCC-ccCC-CCCCCCCCCCCCCcee---------
Q 011856 158 VRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGV-ATLG-LPDSPGVPKGATYETL--------- 226 (476)
Q Consensus 158 v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~-~~~~-~~~~~~~~~~~~~~~~--------- 226 (476)
++|+|||+||++.|+|+||.++++.+||.++++|||++.+++..++... .... .+..+++......+..
T Consensus 106 v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (433)
T PRK08117 106 FFFSNSGAEAIEGALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPE 185 (433)
T ss_pred EEEeCcHHHHHHHHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchh
Confidence 9999999999999999999999999999999999999999887665321 1111 1111121000000000
Q ss_pred eccCCCHHHHHHHHhc--CCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccchhhcc
Q 011856 227 TAPFNDVSALENLFEN--NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYF 303 (476)
Q Consensus 227 ~~~~~d~~~le~~l~~--~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~ 303 (476)
...++|++++++++++ .++++++||+||+++++|.+.|+++||++|+++|++||++||+||||+|| |+|.+++++++
T Consensus 186 ~~~~~~~~~l~~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~~~~~~~~ 265 (433)
T PRK08117 186 VCFLECLRDLESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTGEWFAAQTF 265 (433)
T ss_pred HHHHHHHHHHHHHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCccccchhHhhc
Confidence 1112467788888864 34689999999999999999999999999999999999999999999999 99988888899
Q ss_pred CCCCchhhhhhhcCCCCcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH
Q 011856 304 GVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQG 383 (476)
Q Consensus 304 g~~pDi~t~sK~lg~G~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~ 383 (476)
|+.||++|+||++++|+|+|++++++++++.+. ...+.+|+++||++|++++++|+.++++++.+++++++++++++
T Consensus 266 gv~pDi~t~sK~lg~G~pigav~~~~~i~~~~~---~~~~~~T~~~np~~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~ 342 (433)
T PRK08117 266 GVVPDIMTIAKGIASGLPLSAVVASKELMEQWP---LGSHGTTFGGNPVACAAALATLEVIKEEKLLDNANEMGAYALER 342 (433)
T ss_pred CCCCCEeehhhhccCCCcceeEEEcHHHHhhcc---CCCCCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999998875 34578899999999999999999998789999999999999999
Q ss_pred HHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCC--cceEE--eCCCcHHH
Q 011856 384 IIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF--EAGFT--SLAHSSDD 459 (476)
Q Consensus 384 L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~--~~~~~--~~~~t~e~ 459 (476)
|+++..+++.+.++++.|.|++++|.++. ..++......+.+.++++||++.+.+. +.+++ ++.+|+++
T Consensus 343 L~~l~~~~~~~~~vrg~Gl~~gi~~~~~~-------~~~~~~~~~~~~~~l~~~Gv~~~~~g~~~~~lRl~p~~~~t~~~ 415 (433)
T PRK08117 343 LEVLKEKHPVIGDVRGIGLMIGIEIVDPD-------GEPDGDAVEKILDKCLEKGLLFYLCGNAGNVLRMIPPLTVTKEE 415 (433)
T ss_pred HHHHHhcCCceeeeecCCcEEEEEEecCC-------CCcchHHHHHHHHHHHHCCCEEeecCCCCCEEEEeCCccCCHHH
Confidence 99988788888899999999999997542 112344556788999999999876542 45565 48999999
Q ss_pred HHHHHHHHHHHHHHhh
Q 011856 460 IQHTITAAEKVKMRFL 475 (476)
Q Consensus 460 i~~~~~~l~~~~~~~~ 475 (476)
|++++++|+++++++.
T Consensus 416 i~~~~~~l~~~l~~~~ 431 (433)
T PRK08117 416 IDEGLDILDEALTEYE 431 (433)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999998764
No 47
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=100.00 E-value=4.7e-63 Score=494.95 Aligned_cols=369 Identities=29% Similarity=0.394 Sum_probs=324.0
Q ss_pred CCeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcC--CCCCCCHHHHHHHHHHHhhCCCCCeE
Q 011856 81 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT--SFGAPCLLENVLAEMVISAVPSIEMV 158 (476)
Q Consensus 81 ~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~--~~~~~~~~~~~la~~l~~~~~~~e~v 158 (476)
.|+++.+++|+|+||.|||+||||.+++++++|||+||+|.+|+.+|+++.. ..+++++...+|+++|++.. +.+++
T Consensus 17 ~~~~~~~~~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~L~~~~-~~~~~ 95 (397)
T TIGR03246 17 APFIPVRGEGSRVWDQQGKEYIDFAGGIAVNALGHAHPELVKALIEQADKLWHIGNGYTNEPVLRLAKKLVDAT-FADKV 95 (397)
T ss_pred CCceEEEeecCEEEeCCCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhcccccCccCCHHHHHHHHHHHhhC-CCCEE
Confidence 4899999999999999999999999999999999999999999999999843 23456788899999999988 46899
Q ss_pred EEeCCHHHHHHHHHHHHHhcc------CCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCC
Q 011856 159 RFVNSGTEACMGVLRLARAFT------GRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFND 232 (476)
Q Consensus 159 ~~~~sGseA~~~al~~ar~~~------~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 232 (476)
+|++||+|||+.|+++||.++ ++.+||.++++|||++...+..++.......+ ......+..+||||
T Consensus 96 ~f~~SGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~d 168 (397)
T TIGR03246 96 FFCNSGAEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGF-------APLPGGIKHAPYND 168 (397)
T ss_pred EEeCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCC-------CCCCCceEEeCCCC
Confidence 999999999999999999884 78899999999999999888777653221111 01122467889999
Q ss_pred HHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccchhhccCCCCchhh
Q 011856 233 VSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTT 311 (476)
Q Consensus 233 ~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pDi~t 311 (476)
++++++.+.+ ++++||+||+++++|.+.|+++||++|+++|++||+++|+||+|+|| |+|.+++++++++.||++|
T Consensus 169 ~~~l~~~l~~---~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~~~a~~~~gv~pDi~t 245 (397)
T TIGR03246 169 LAAAKALISD---KTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDILT 245 (397)
T ss_pred HHHHHHHhcc---CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccccchhhhhcCCCCCEEE
Confidence 9999999963 69999999999999999999999999999999999999999999999 9999888899999999999
Q ss_pred hhhhcCCCCcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhc
Q 011856 312 LGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKA 391 (476)
Q Consensus 312 ~sK~lg~G~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 391 (476)
+||++++|+|+|++++++++++.+.. ..+.+||++||+++++++++|+.++++++.+++++++++++++|+++..++
T Consensus 246 ~~K~lggG~pigav~~~~~i~~~~~~---~~~~~t~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~~~~l~~~L~~l~~~~ 322 (397)
T TIGR03246 246 SAKALGGGFPIGAMLTTTEIAAHLKV---GTHGTTYGGNPLACAVAGKVLDLVNTPELLAGVKQRHDLFVDGLEKINARY 322 (397)
T ss_pred eehhhhCCcceeEEEEcHHHHHhccC---CCcCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999998863 346789999999999999999998878899999999999999999987778
Q ss_pred CCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCCcceEE--eCCCcHHHHHHHHHHHHH
Q 011856 392 GHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAEK 469 (476)
Q Consensus 392 ~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~--~~~~t~e~i~~~~~~l~~ 469 (476)
+++.++++.|.|+++++.+. .......+++.|+++|+++.+.+.+.+|+ ++.+|++||++++++|++
T Consensus 323 ~~~~~vrg~G~~~~i~~~~~-----------~~~~~~~~~~~l~~~Gv~~~~~g~~~lR~~p~~~~t~~~i~~~~~~l~~ 391 (397)
T TIGR03246 323 NVFSEIRGKGLLIGAVLTEA-----------YQGKAKQFVNAAAEEGVIALIAGPNVVRFAPSLVISDDDIDEGLARFER 391 (397)
T ss_pred CCeEeeecCceEEEEEEcCc-----------hhhHHHHHHHHHHHCCeEEeecCCCEEEEeCCCCCCHHHHHHHHHHHHH
Confidence 88889999999999998532 01234678899999999998876666776 799999999999999999
Q ss_pred HHHHh
Q 011856 470 VKMRF 474 (476)
Q Consensus 470 ~~~~~ 474 (476)
++.++
T Consensus 392 ~l~~~ 396 (397)
T TIGR03246 392 AIEQV 396 (397)
T ss_pred HHHHh
Confidence 99875
No 48
>PRK06148 hypothetical protein; Provisional
Probab=100.00 E-value=4.4e-63 Score=540.13 Aligned_cols=386 Identities=24% Similarity=0.294 Sum_probs=325.6
Q ss_pred CCeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhc-CCCCCCCHHHHHHHHHHHhhCC-CCCeE
Q 011856 81 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKG-TSFGAPCLLENVLAEMVISAVP-SIEMV 158 (476)
Q Consensus 81 ~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~-~~~~~~~~~~~~la~~l~~~~~-~~e~v 158 (476)
.|+++++|+|+|+||.|||+||||.+++ .++||+||+|.+|+.+|++++ .+..+.++...+|+++|++.+| +.+++
T Consensus 606 ~p~~i~~g~G~~l~D~dG~~ylD~~~g~--~~lGH~hp~v~~Ai~~q~~~l~~~~~~~~~~~~~lAe~L~~~~p~~~~~v 683 (1013)
T PRK06148 606 DPIKFVRGWGVWLIDNRGRAYLDCFNNV--CHVGHAHPRVVAAAARQAARLNTNTRYLHDAIVAYAERLTATLPDGLTVA 683 (1013)
T ss_pred CCceEEEeeecEEEECCCCEEEEcccCh--hhcCCCCHHHHHHHHHHHhhcCCcCCcCCHHHHHHHHHHHHhCCCCcCEE
Confidence 4899999999999999999999999985 789999999999999999985 4445678899999999999998 46899
Q ss_pred EEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCC-CCCCCCCCCCceeeccCC--C---
Q 011856 159 RFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPD-SPGVPKGATYETLTAPFN--D--- 232 (476)
Q Consensus 159 ~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--d--- 232 (476)
+|+|||+||++.|||+||.+|++.+||.++++|||++.+++..++........+. ..++......+.+..|++ +
T Consensus 684 ~f~nSGsEA~e~AlklAr~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 763 (1013)
T PRK06148 684 FFVNSGSEANSLALRLARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEH 763 (1013)
T ss_pred EEeCCcHHHHHHHHHHHHHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhhh
Confidence 9999999999999999999999999999999999999998877653211100010 011111111223445565 2
Q ss_pred ----HHHHHHHHh---cCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccc-cchhhcc
Q 011856 233 ----VSALENLFE---NNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAY-GGAQEYF 303 (476)
Q Consensus 233 ----~~~le~~l~---~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~-~~~~~~~ 303 (476)
.+.+++.++ .+++++++||+||+++++|.+.|+++||++|+++|++||+++|+||||||| |+|. +|+++++
T Consensus 764 ~~~~~~~l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~ 843 (1013)
T PRK06148 764 GRRFAESVAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQ 843 (1013)
T ss_pred HHHHHHHHHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCCcchhhhhc
Confidence 245666664 345689999999999999999999999999999999999999999999999 9996 8999999
Q ss_pred CCCCchhhhhhhcCCCCcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH
Q 011856 304 GVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQG 383 (476)
Q Consensus 304 g~~pDi~t~sK~lg~G~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~ 383 (476)
|++|||+|+||++|||+|+|++++++++++.+.+. ..+++||++||++|++++++|++++++++.+++++++++|+++
T Consensus 844 gv~PDivt~gK~lggG~Plgav~~~~ei~~~~~~g--~~~~~Tf~gnpla~aaa~a~L~~i~~e~l~~~~~~~G~~l~~~ 921 (1013)
T PRK06148 844 GVVPDIVTMGKPIGNGHPMGAVVTTREIADSFDNG--MEYFNTFGGNPVSCAIGLAVLDIIEDEDLQRNALEIGNYLLAG 921 (1013)
T ss_pred CCCcceeeecccccCCcceEEEEEcHHHHhhccCC--CccccCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999988642 3467999999999999999999999999999999999999999
Q ss_pred HHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCC--cceE--EeCCCcHHH
Q 011856 384 IIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF--EAGF--TSLAHSSDD 459 (476)
Q Consensus 384 L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~--~~~~--~~~~~t~e~ 459 (476)
|+++..+++++.+|+|.|+|++++|..+.. ...++......+.+.|+++||++.+.+. +.++ +++++|+++
T Consensus 922 L~~l~~~~~~i~~VrG~Gl~~gvel~~~~~-----~~~~~~~~~~~i~~~~~~~Gvl~~~~g~~~~vlr~~Ppl~it~~~ 996 (1013)
T PRK06148 922 LRELQDRFDIIGDVRGMGLFLGIELVTDRK-----TKAPATAIARYVKNGARERGILIGTEGPHDNVLKIRPPLIFSRAD 996 (1013)
T ss_pred HHHHHHhCCCceEEeeeceEEEEEecCCcc-----ccCccHHHHHHHHHHHHhCCeEEeccCCCCCEEEEeCCccCCHHH
Confidence 999988999999999999999999975321 1223445567889999999999987653 3343 489999999
Q ss_pred HHHHHHHHHHHHHHhh
Q 011856 460 IQHTITAAEKVKMRFL 475 (476)
Q Consensus 460 i~~~~~~l~~~~~~~~ 475 (476)
+|+++++|++++.++.
T Consensus 997 id~~l~~l~~~l~~~~ 1012 (1013)
T PRK06148 997 ADHLLEVLDDVLAAAL 1012 (1013)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999998764
No 49
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=100.00 E-value=9.3e-64 Score=499.64 Aligned_cols=378 Identities=23% Similarity=0.304 Sum_probs=319.5
Q ss_pred CeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcCC--C-CCCCHHHHHHHHHHHhhCC-CCCe
Q 011856 82 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTS--F-GAPCLLENVLAEMVISAVP-SIEM 157 (476)
Q Consensus 82 p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~--~-~~~~~~~~~la~~l~~~~~-~~e~ 157 (476)
|+++.+++|+|+||.|||+||||.++++++++||+||+|.+|+++|+++... + .+.++...+|+++|++..| +.++
T Consensus 26 ~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~ 105 (428)
T PRK07986 26 VYPVVSAEGCELILADGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFGGITHPPAIELCRKLVAMTPQPLEC 105 (428)
T ss_pred CeeEEeeeeeEEEeCCCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHhhcCCccccccCCHHHHHHHHHHHhhCCCCcCE
Confidence 5789999999999999999999999999999999999999999999998532 2 3478889999999999998 4789
Q ss_pred EEEeCCHHHHHHHHHHHHHhc-----cCCceEEEEeCCCCCCchhHHhhcCCCC-ccCCC-CCCCCCCCCCCCce---ee
Q 011856 158 VRFVNSGTEACMGVLRLARAF-----TGRERIIKFEGCYHGHADPFLVKAGSGV-ATLGL-PDSPGVPKGATYET---LT 227 (476)
Q Consensus 158 v~~~~sGseA~~~al~~ar~~-----~~~~~ii~~~~~yhg~~~~~~~~~g~~~-~~~~~-~~~~~~~~~~~~~~---~~ 227 (476)
++|++||+||++.|+|+||.+ +++.+||.++++|||++..++..++... ....+ +..+++........ ..
T Consensus 106 v~f~~SGsEAve~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 185 (428)
T PRK07986 106 VFLADSGSVAVEVAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGE 185 (428)
T ss_pred EEEeCCcHHHHHHHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcccchh
Confidence 999999999999999999988 6789999999999999998887765321 11111 11111100000000 01
Q ss_pred ccCCCHHHHHHHHhcCCCCeEEEEEccc-CCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccchhhccCC
Q 011856 228 APFNDVSALENLFENNKGEIAAIILEPV-VGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGV 305 (476)
Q Consensus 228 ~~~~d~~~le~~l~~~~~~~a~vi~ep~-~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~ 305 (476)
+++||++++++.++++++++++||+||+ ++++|.+.++++||++|+++|++||++||+||||+|| |+|.+|+++++|+
T Consensus 186 ~~~~d~~~l~~~l~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG~~fa~~~~gv 265 (428)
T PRK07986 186 WDERDIAPFARLMAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTGKLFACEHAGI 265 (428)
T ss_pred hHHHHHHHHHHHHHhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCCeeeecccCC
Confidence 2357889999999876678999999996 8889999999999999999999999999999999999 9999999999999
Q ss_pred CCchhhhhhhcCCC-CcEEEEEecHHHHHhhcCCC--CccccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Q 011856 306 TPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAPAG--PMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQ 382 (476)
Q Consensus 306 ~pDi~t~sK~lg~G-~~iG~~~~~~~i~~~l~~~~--~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~ 382 (476)
.||++|+||+++|| +|+|++++++++++.+.... .+.+++||++||++|++++++|+.++++++++++++++++|++
T Consensus 266 ~PDi~t~gK~l~gG~~p~~av~~~~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~L~~i~~~~~~~~~~~~g~~l~~ 345 (428)
T PRK07986 266 APDILCLGKALTGGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAVANASLSLLESGDWQQQVAAIEAQLRE 345 (428)
T ss_pred CCCEEEechhhhCCcccCcchhchHHHHHHhhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 99999999999999 59999999999999986421 2457889999999999999999999988999999999999999
Q ss_pred HHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCCcceEE--eCCCcHHHH
Q 011856 383 GIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDI 460 (476)
Q Consensus 383 ~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~--~~~~t~e~i 460 (476)
.|+++. +++.+.++++.|+|+++++.++. ....+.+.|+++||++.+.+ +.+++ ++++|++||
T Consensus 346 ~l~~l~-~~~~i~~vRg~Gl~~~ve~~~~~-------------~~~~~~~~l~~~Gl~~~~~g-~~i~~~Ppl~it~~ei 410 (428)
T PRK07986 346 ELAPLR-DAPMVADVRVLGAIGVVETTRPV-------------NMAALQRFFVEQGVWIRPFG-KLIYLMPPYIILPEQL 410 (428)
T ss_pred HHHHHh-cCCCEEeEeccceEEEEEeCCcc-------------cHHHHHHHHHHCCcEEEecC-CEEEEeCCCCCCHHHH
Confidence 999875 47788899999999999996421 13568889999999998865 35555 799999999
Q ss_pred HHHHHHHHHHHHHh
Q 011856 461 QHTITAAEKVKMRF 474 (476)
Q Consensus 461 ~~~~~~l~~~~~~~ 474 (476)
++++++|++++++-
T Consensus 411 ~~~~~~l~~~l~~~ 424 (428)
T PRK07986 411 QRLTAAVNRAVQDE 424 (428)
T ss_pred HHHHHHHHHHHhhc
Confidence 99999999998754
No 50
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=100.00 E-value=9.2e-63 Score=494.55 Aligned_cols=375 Identities=26% Similarity=0.404 Sum_probs=320.1
Q ss_pred CeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcCCCC---CCCHHHHHHHHHHHhhCCC--CC
Q 011856 82 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFG---APCLLENVLAEMVISAVPS--IE 156 (476)
Q Consensus 82 p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~~---~~~~~~~~la~~l~~~~~~--~e 156 (476)
|+++.+++|+|+||.|||+||||.+++++.++||+||+|.+|+.+|+++..+.. ..++...+|+++|++..|. .+
T Consensus 23 ~~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~ 102 (421)
T PRK09792 23 NFFAQSAENATLKDVEGNEYIDFAAGIAVLNTGHRHPDLVAAVEQQLQQFTHTAYQIVPYESYVTLAEKINALAPVSGQA 102 (421)
T ss_pred CeeEEeccccEEEeCCCCEEEEccCchhhhcCCCCCHHHHHHHHHHHHhccCcccCccCCHHHHHHHHHHHHhCCCCCCc
Confidence 789999999999999999999999999999999999999999999999864332 3678889999999999873 47
Q ss_pred eEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCC-ccCCCCCCCCCCCCCCCceeeccC-----
Q 011856 157 MVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGV-ATLGLPDSPGVPKGATYETLTAPF----- 230 (476)
Q Consensus 157 ~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~----- 230 (476)
+++|++||+||++.|+|+||.++++.+||.++++|||++.+++..++... ....+.. ....+..+|+
T Consensus 103 ~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~-------~~~~~~~v~~p~~~~ 175 (421)
T PRK09792 103 KTAFFTTGAEAVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGP-------FPGSVYHVPYPSDLH 175 (421)
T ss_pred eEEEeCChHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCC-------CCCCcEEcCCCcccc
Confidence 99999999999999999999999999999999999999999998766421 1111100 0112333333
Q ss_pred -----CCHHHHHHHHhc--CCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccchhhc
Q 011856 231 -----NDVSALENLFEN--NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEY 302 (476)
Q Consensus 231 -----~d~~~le~~l~~--~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~ 302 (476)
++++.+++++++ .++++++||+||+++++|.+.++++|+++|+++|++||++||+|||++|| |+|.++++++
T Consensus 176 ~~~~~~~~~~l~~~~~~~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~ 255 (421)
T PRK09792 176 GISTQDSLDAIERLFKSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKLFAMDH 255 (421)
T ss_pred cccHHHHHHHHHHHHHhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHh
Confidence 346888888874 24579999999999999999999999999999999999999999999999 9998899999
Q ss_pred cCCCCchhhhhhhcCCCCcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Q 011856 303 FGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQ 382 (476)
Q Consensus 303 ~g~~pDi~t~sK~lg~G~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~ 382 (476)
+++.||++||||++++|+|+|++++++++++.+.. ..+.+||++||++|++++++++.++++++.++++++++++++
T Consensus 256 ~~~~pDi~t~gK~l~~G~pigav~~~~~i~~~~~~---~~~~~T~~gnpl~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~ 332 (421)
T PRK09792 256 YADKPDLMTMAKSLAGGMPLSGVVGNANIMDAPAP---GGLGGTYAGNPLAVAAAHAVLNIIDKESLCERANQLGQRLKN 332 (421)
T ss_pred cCCCCcEEEeehhhcCCCceEEEEEcHHHHhccCC---CCcCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998863 347789999999999999999999888899999999999999
Q ss_pred HHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCC--CcceEE--eCCCcHH
Q 011856 383 GIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ--FEAGFT--SLAHSSD 458 (476)
Q Consensus 383 ~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~--~~~~~~--~~~~t~e 458 (476)
.|+++..+++.+.+++|.|+|++++|.++.. ..++......+.+.|+++||++.+.+ .+.+++ +++++++
T Consensus 333 ~l~~l~~~~p~v~~vrG~Gl~~~ie~~~~~~------~~~~~~~~~~l~~~~~~~Gv~i~~~g~~~~~irl~P~l~i~~~ 406 (421)
T PRK09792 333 TLIDAKESVPAIAAVRGLGSMIAAEFNDPQT------GEPSAAIAQKIQQRALAQGLLLLTCGAYGNVIRFLYPLTIPDA 406 (421)
T ss_pred HHHHHHHhCCCcceecccceEEEEEecCCcc------CCcchHHHHHHHHHHHHCCcEEeecCCCCCEEEEeCCCcCCHH
Confidence 9999988888888999999999999964321 11233446788999999999997543 244544 6889999
Q ss_pred HHHHHHHHHHHHHH
Q 011856 459 DIQHTITAAEKVKM 472 (476)
Q Consensus 459 ~i~~~~~~l~~~~~ 472 (476)
|+++++++|++++.
T Consensus 407 ei~~~~~~l~~~l~ 420 (421)
T PRK09792 407 QFDAAMKILQDALS 420 (421)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999999875
No 51
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=100.00 E-value=1.3e-62 Score=494.49 Aligned_cols=385 Identities=25% Similarity=0.322 Sum_probs=317.9
Q ss_pred CCeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcC---CCCCCCHHHHHHHHHHHhhCC-CCC
Q 011856 81 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT---SFGAPCLLENVLAEMVISAVP-SIE 156 (476)
Q Consensus 81 ~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~---~~~~~~~~~~~la~~l~~~~~-~~e 156 (476)
.|+++.+++|+|+||.|||+||||.+++++.++||+||+|.+|+.+|+++.. .+..+++...+|+++|++.+| +.+
T Consensus 28 ~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~l~~~~p~~~~ 107 (442)
T PRK13360 28 APRLLVAAKGMYYTTHDGRRVLDGTAGLWCVNAGHGRPEIVEAVRAQAGELDYAPAFQMGHPKAFELANRIAEIAPGGLN 107 (442)
T ss_pred CCceEEeeeeeEEEeCCCCEEEECchhHHHhccCCCCHHHHHHHHHHHHhCCCcccCCcCCHHHHHHHHHHHHhCCCCCC
Confidence 4899999999999999999999999999999999999999999999998743 234568889999999999997 578
Q ss_pred eEEEeCCHHHHHHHHHHHHHhcc------CCceEEEEeCCCCCCchhHHhhcCCCCccCCC-CCCCCCCCCCCC-ceeec
Q 011856 157 MVRFVNSGTEACMGVLRLARAFT------GRERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATY-ETLTA 228 (476)
Q Consensus 157 ~v~~~~sGseA~~~al~~ar~~~------~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~-~~~~~ 228 (476)
+|+|++||+||++.|+|+||.++ ++.+||.+.++|||++.+++..++.......+ +...++...... .....
T Consensus 108 ~v~f~~sGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~ 187 (442)
T PRK13360 108 HVFFTNSGSESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARN 187 (442)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhcc
Confidence 99999999999999999999884 57899999999999999988877654322111 111111000000 00010
Q ss_pred cCC---------CHHHHHHHHhcC-CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccccc
Q 011856 229 PFN---------DVSALENLFENN-KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG 297 (476)
Q Consensus 229 ~~~---------d~~~le~~l~~~-~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~ 297 (476)
++. .+++||++++.+ ++++++||+||+++++|.+.|+++||++|+++|++||++||+||||+|| |+|.+
T Consensus 188 ~~~~~~~~~~~~~~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~~ 267 (442)
T PRK13360 188 AFSKGQPEHGAELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAP 267 (442)
T ss_pred ccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccc
Confidence 110 256788888643 4689999999999999999999999999999999999999999999999 99999
Q ss_pred chhhccCCCCchhhhhhhcCCC-CcEEEEEecHHHHHhhcCCC----CccccCCCCCcHHHHHHHHHHHHHhcCCCHHHH
Q 011856 298 GAQEYFGVTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAPAG----PMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEY 372 (476)
Q Consensus 298 ~~~~~~g~~pDi~t~sK~lg~G-~~iG~~~~~~~i~~~l~~~~----~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~ 372 (476)
|+++++|+.||++||||++++| +|+|++++++++++.+.... ...+.+||++||++|++++++|+.++++++.++
T Consensus 268 ~a~~~~gv~PDivt~gK~l~gG~~P~gav~~~~~i~~~~~~~~~~~~~~~~~~T~~g~pl~~aaa~a~L~~l~~~~l~~~ 347 (442)
T PRK13360 268 FAAQYFGVTPDLLTCAKGLTNGAIPMGAVFVSSEIHDAFMQGPEAGIEFFHGYTYSGHPLACAAALATLDLYEREGLLTR 347 (442)
T ss_pred hhhhhcCCCCceeeeeeccccCccceEEEEEcHHHHHHhhcCCccccccccCCCCCCCHHHHHHHHHHHHHHHhCCHHHH
Confidence 9999999999999999999988 79999999999999875321 235778999999999999999999988889999
Q ss_pred HHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCCcceEE-
Q 011856 373 LNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT- 451 (476)
Q Consensus 373 ~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~- 451 (476)
++++++++++.|+++. +++.+.++++.|+|+++++..... .+.....++...|+++||++.+.+ +.+++
T Consensus 348 ~~~~g~~l~~~l~~l~-~~~~v~~vrG~Gl~~~~~l~~~~~--------~~~~~~~~~~~~l~~~Gvl~~~~~-~~lr~~ 417 (442)
T PRK13360 348 AARLAPYWEDALHSLR-DAPHVIDIRNLGLVGAVELAPRDG--------KPGKRAYEVFLKCFEKGLMIRYTG-DILALS 417 (442)
T ss_pred HHHHHHHHHHHHHHhh-cCCCeeeeeccceEEEEEEecCCC--------CcchhHHHHHHHHHHCCcEEEecC-CEEEEe
Confidence 9999999999999874 477788999999999999964211 112234567788999999998765 34555
Q ss_pred -eCCCcHHHHHHHHHHHHHHHHHhh
Q 011856 452 -SLAHSSDDIQHTITAAEKVKMRFL 475 (476)
Q Consensus 452 -~~~~t~e~i~~~~~~l~~~~~~~~ 475 (476)
++.+|++|||+++++|++++++++
T Consensus 418 Ppl~~t~~eid~~~~~l~~~l~~~~ 442 (442)
T PRK13360 418 PPLIIEEAQIDELFDILAQALKETI 442 (442)
T ss_pred CCCccCHHHHHHHHHHHHHHHHHhC
Confidence 589999999999999999998763
No 52
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=100.00 E-value=2.3e-62 Score=492.69 Aligned_cols=399 Identities=30% Similarity=0.513 Sum_probs=331.8
Q ss_pred HHHHHHHHhhhCCCCCCCccccccccC-CCCeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhc
Q 011856 53 SEEAFNVAKELMPGGVNSPVRAFKSVG-GQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKG 131 (476)
Q Consensus 53 ~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~ 131 (476)
|.++++++++++|+|++++.|.+.++. .+|+++++++|+|+||.|||+||||.+++++.++||+||+|.+|+++|++++
T Consensus 1 s~~l~~~a~~~~p~g~~~~~~~~~~~~~~~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~ 80 (431)
T PRK06209 1 SQLLQSRLHALIPGGAHTYAKGDDQYPELAPGFIQRGSGAHVWDVDGNEYIEYGMGLRAVGLGHAYPPVVEAVREALQDG 80 (431)
T ss_pred CHHHHHHHHhhCCCCCCCCccccccCCCCCCeEEEeccCCEEEeCCCCEEEEccccccchhcCCCCHHHHHHHHHHHHhC
Confidence 468999999999999998888775443 4589999999999999999999999999999999999999999999999997
Q ss_pred CCCCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEE-eCCCCCCchhHHhhcCCCCccCC
Q 011856 132 TSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKF-EGCYHGHADPFLVKAGSGVATLG 210 (476)
Q Consensus 132 ~~~~~~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~-~~~yhg~~~~~~~~~g~~~~~~~ 210 (476)
..+..+...+.+|+++|.+.+|+.++++|+|||+||++.|+|+||.++++.+|+.+ .++|||+..+.. |..
T Consensus 81 ~~~~~~~~~~~~la~~l~~~~p~~~~v~f~~sGseA~e~AlklAr~~tgr~~i~~~~~~~~h~~~~~~~---g~~----- 152 (431)
T PRK06209 81 CNFTRPSAIELDAAESFLELIDGADMVKFCKNGSDATSAAVRLARAYTGRDLVARCADHPFFSTDDWFI---GTT----- 152 (431)
T ss_pred cCCCCCCHHHHHHHHHHHHhCCccceEEEecCHHHHHHHHHHHHHHHhCCCeEEEeccCcccccccccc---ccC-----
Confidence 76666777788999999999987789999999999999999999999999999999 678887543322 110
Q ss_pred CCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc
Q 011856 211 LPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT 290 (476)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~ 290 (476)
+...+.+.........++|||+++|+++++++++++++||+||++++ .++++||++|+++|++||++||+||||+
T Consensus 153 -~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~aavi~Epv~g~----~~~~~~l~~l~~lc~~~g~lLI~DEv~t 227 (431)
T PRK06209 153 -PMSAGIPASVSALTVTFRYNDIASLEALFEDHPGRIACVILEPATAD----EPQDGFLHEVRRLCHENGALFILDEMIT 227 (431)
T ss_pred -CCCCCCChhHhccccccCCCCHHHHHHHHHhCCCCEEEEEEccccCC----CCCHHHHHHHHHHHHHcCCEEEEEcccc
Confidence 11112211112235678899999999999876678999999999876 7789999999999999999999999999
Q ss_pred CccccccchhhccCCCCchhhhhhhcCCCCcEEEEEecHHHHHh--hcC---CCCccccCCCCCcHHHHHHHHHHHHHhc
Q 011856 291 GFRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEM--VAP---AGPMYQAGTLSGNPLAMTAGIHTLKRLK 365 (476)
Q Consensus 291 g~r~g~~~~~~~~g~~pDi~t~sK~lg~G~~iG~~~~~~~i~~~--l~~---~~~~~~~~t~~~~~~~~aaa~aal~~~~ 365 (476)
||+.+..+..+++|+.||++|+||++|+|+|+|++++++++++. +.. ...+.+.+|+++||++|++++++|+.++
T Consensus 228 G~~~~~~g~~~~~gv~PDi~t~gK~lggG~p~~av~~~~~i~~~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~ 307 (431)
T PRK06209 228 GFRWHMRGAQKLYGIVPDLSCFGKALGNGFAVSALAGKREYMELGGLEHTDRERVFLLSTTHGAETHALAAAIATMAIYR 307 (431)
T ss_pred cCCcCcchhhHHhCCCcceeeehhhhcCCcccEEEEEHHHHHhhhcccccCCCCceeeccCCCCCHHHHHHHHHHHHHHh
Confidence 99333345566789999999999999999999999999999987 321 1223478899999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCC
Q 011856 366 EPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ 445 (476)
Q Consensus 366 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~ 445 (476)
+++++++++++++++++.|+++..++++..++++.|.++.+++...... ..+.......+.+.|+++|+++.
T Consensus 308 ~~~~~~~~~~~g~~l~~~L~~~~~~~~~~~~vr~~G~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~Gi~~p--- 379 (431)
T PRK06209 308 DEDVIERLHEQGAKLAAGVNEAAAEHGLQDHVRVSGRPCCLTYSTLDGN-----GQPSQAFRTLFLQETIRRGVLMP--- 379 (431)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeecceEEEEEecCCcc-----cCCcHHHHHHHHHHHHHCCcccc---
Confidence 8889999999999999999998888898888999999888887532110 01223334578889999999873
Q ss_pred CcceEEeCCCcHHHHHHHHHHHHHHHHHh
Q 011856 446 FEAGFTSLAHSSDDIQHTITAAEKVKMRF 474 (476)
Q Consensus 446 ~~~~~~~~~~t~e~i~~~~~~l~~~~~~~ 474 (476)
.++++..||++||++++++|++++.++
T Consensus 380 --~l~is~~ht~~dId~~l~~l~~~l~~~ 406 (431)
T PRK06209 380 --SLVVSYAHGDADIERTIDAVHGALGVY 406 (431)
T ss_pred --cccccccCCHHHHHHHHHHHHHHHHHH
Confidence 357788999999999999999998765
No 53
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=100.00 E-value=3.6e-62 Score=491.42 Aligned_cols=383 Identities=25% Similarity=0.348 Sum_probs=319.4
Q ss_pred CCeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcCCCC---CCCHHHHHHHHHHHhhCCC--C
Q 011856 81 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFG---APCLLENVLAEMVISAVPS--I 155 (476)
Q Consensus 81 ~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~~---~~~~~~~~la~~l~~~~~~--~ 155 (476)
+|+++.+++|+|+||.|||+||||.+++++.++||+||+|.+|+.+|++++.+.. .+++...+|+++|.+..|+ .
T Consensus 15 ~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~ql~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~ 94 (420)
T TIGR00700 15 LPVFAARAEGAILEDVDGNRLIDFASGIAVLNIGHSHPRVVDAVRTQVAEFTHTCFMVTPYEGYVALAEKLNRIAPGSGP 94 (420)
T ss_pred CCeeEEeeeeeEEEeCCCCEEEECccCHHhccCCCCCHHHHHHHHHHHHhccCccccccCChHHHHHHHHHHHhCCCCCC
Confidence 4899999999999999999999999999999999999999999999999864322 4567789999999999873 4
Q ss_pred CeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCC-CccCCC-CCCCCCCCCCCCcee-------
Q 011856 156 EMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSG-VATLGL-PDSPGVPKGATYETL------- 226 (476)
Q Consensus 156 e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~-~~~~~~-~~~~~~~~~~~~~~~------- 226 (476)
++++|++||+||++.|+|+||.++++.+||.+.++|||++.+++..++.. .....+ |..+++......+..
T Consensus 95 ~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (420)
T TIGR00700 95 KKSVFFNSGAEAVENAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDK 174 (420)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCcccccccccc
Confidence 79999999999999999999999999999999999999999999876642 111111 111111000000000
Q ss_pred eccCC-CHHHHHHHHh--cCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccchhhc
Q 011856 227 TAPFN-DVSALENLFE--NNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEY 302 (476)
Q Consensus 227 ~~~~~-d~~~le~~l~--~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~ 302 (476)
..+++ +++.+++.+. .+++++++||+||+++++|.+.++++|+++|+++|++||++||+||||+|| |+|.++++++
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g~~~a~~~ 254 (420)
T TIGR00700 175 QLSTDGELAAARAIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTGAMFACEH 254 (420)
T ss_pred chhHHHHHHHHHHHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccchhHHHhh
Confidence 01112 2667888774 346789999999999999999999999999999999999999999999999 9998888899
Q ss_pred cCCCCchhhhhhhcCCCCcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Q 011856 303 FGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQ 382 (476)
Q Consensus 303 ~g~~pDi~t~sK~lg~G~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~ 382 (476)
+++.||++||||++++|+|+||+++++++++.+.. ..+.+|+++||++|++++++|+.++++++.++++++++++++
T Consensus 255 ~~~~pDi~~lsK~l~~G~pig~v~~~~~i~~~~~~---~~~~~T~~~~pl~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~ 331 (420)
T TIGR00700 255 EGPEPDLITTAKSLADGLPLSGVTGRAEIMDAPAP---GGLGGTYAGNPLACAAALAVLAIIESEGLIERARQIGRLVTD 331 (420)
T ss_pred cCCCCCEEEeeccccCCcceEEEEecHHHHhhcCC---CCcCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998863 457889999999999999999999888999999999999999
Q ss_pred HHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCC--cceEE--eCCCcHH
Q 011856 383 GIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF--EAGFT--SLAHSSD 458 (476)
Q Consensus 383 ~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~--~~~~~--~~~~t~e 458 (476)
+|+++..+++.+.++++.|+|+++++.++. ...++......+.+.|+++||++.|++. +.+++ +++++++
T Consensus 332 ~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~------~~~~~~~~~~~l~~~~~~~Gv~i~p~~~f~~~lRl~p~l~~~~~ 405 (420)
T TIGR00700 332 RLTTLKAVDPRIGDVRGLGAMIAVELVDPG------TTEPDAGLAERIATAAHAAGLLLLTCGMFGNIIRFLPPLTIGDE 405 (420)
T ss_pred HHHHHHhhCCCEEEeeccceEEEEEEecCC------CCCccHHHHHHHHHHHHHCCeEEeccCCCCCEEEEECCCCcCHH
Confidence 999988888888899999999999996421 1123445567788889999999998642 45666 4568999
Q ss_pred HHHHHHHHHHHHHH
Q 011856 459 DIQHTITAAEKVKM 472 (476)
Q Consensus 459 ~i~~~~~~l~~~~~ 472 (476)
++++++++|+++++
T Consensus 406 ~l~~~~~~l~~~l~ 419 (420)
T TIGR00700 406 LLSEGLDILCAILA 419 (420)
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999999874
No 54
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=2.7e-62 Score=489.86 Aligned_cols=370 Identities=24% Similarity=0.336 Sum_probs=314.4
Q ss_pred eEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcCC--C-CCCCHHHHHHHHHHHhhCC-CCCeE
Q 011856 83 IVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTS--F-GAPCLLENVLAEMVISAVP-SIEMV 158 (476)
Q Consensus 83 ~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~--~-~~~~~~~~~la~~l~~~~~-~~e~v 158 (476)
+++++++|+|+||.|||+||||.+++++.++||+||+|.+|+++|+++..+ + ++.++...+|+++|++..| +.++|
T Consensus 28 ~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v 107 (429)
T PRK06173 28 YPVERADGVMITLKDGRRLIDGMSSWWAALHGYNHPRLNAAATNQLAKMSHIMFGGFTHEPAVELAQKLLEILPPSLNKI 107 (429)
T ss_pred ceEEeceeeEEEcCCCCEEEEccchHHhccCCCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHhhCCCCcCEE
Confidence 469999999999999999999999999999999999999999999998542 2 4578889999999999998 57899
Q ss_pred EEeCCHHHHHHHHHHHHHhc------cCCceEEEEeCCCCCCchhHHhhcCCCC-ccCCC-CCCCCCCCCCCCceeeccC
Q 011856 159 RFVNSGTEACMGVLRLARAF------TGRERIIKFEGCYHGHADPFLVKAGSGV-ATLGL-PDSPGVPKGATYETLTAPF 230 (476)
Q Consensus 159 ~~~~sGseA~~~al~~ar~~------~~~~~ii~~~~~yhg~~~~~~~~~g~~~-~~~~~-~~~~~~~~~~~~~~~~~~~ 230 (476)
+|++||+||++.|+|+||.+ +++.+||.+.++|||.+..++..++... ....+ +.... +..+|+
T Consensus 108 ~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~--------~~~~~~ 179 (429)
T PRK06173 108 FFADSGSVAVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPV--------QYFLPQ 179 (429)
T ss_pred EEeCCchHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCC--------CeEeCC
Confidence 99999999999999999988 4688999999999999888877655311 11001 00011 111111
Q ss_pred -----------CCHHHHHHHHhcCCCCeEEEEEccc-CCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccccc
Q 011856 231 -----------NDVSALENLFENNKGEIAAIILEPV-VGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG 297 (476)
Q Consensus 231 -----------~d~~~le~~l~~~~~~~a~vi~ep~-~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~ 297 (476)
++++.|++.++++++++++||+||+ ++++|.+.|+++|+++|+++|++||++||+||||+|| |+|.+
T Consensus 180 p~~~~~~~~~~~~l~~l~~~i~~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~ 259 (429)
T PRK06173 180 PSIKFGEEWNDEAIEPLQDLLEQKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTGKL 259 (429)
T ss_pred CCcccchhHHHHHHHHHHHHHHhCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCcCCcc
Confidence 1477788888766678999999997 9999999999999999999999999999999999999 99999
Q ss_pred chhhccCCCCchhhhhhhcCCC-CcEEEEEecHHHHHhhcCC--CCccccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHH
Q 011856 298 GAQEYFGVTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAPA--GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLN 374 (476)
Q Consensus 298 ~~~~~~g~~pDi~t~sK~lg~G-~~iG~~~~~~~i~~~l~~~--~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~ 374 (476)
|+++++|+.|||+||||+++|| +|++++++++++++.+.+. ....+++||++||++|++++++|+.++++++.++++
T Consensus 260 ~a~~~~gv~PDiv~~gK~l~gG~~p~~a~~~~~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~i~~~~~~~~~~ 339 (429)
T PRK06173 260 FALEHAGVVPDIMCIGKALTGGYLTLSATITTEAIAQTICSGEAKCFMHGPTFMANPLACAIAAESIRLLLESPWQQNIQ 339 (429)
T ss_pred hHHHhcCCCCCEEEeehhhhCCccccceEEecHHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 9999999999999999999999 5999999999999988531 224578899999999999999999998888999999
Q ss_pred HHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCCcceEE--e
Q 011856 375 KITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--S 452 (476)
Q Consensus 375 ~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~--~ 452 (476)
+++++|+++|+++ .+++.+.++++.|+|+++++.+.. ....+.+.|+++||++.+.+ +.+++ +
T Consensus 340 ~~g~~l~~~L~~~-~~~~~v~~vRg~Gl~~~iel~~~~-------------~~~~i~~~l~e~Gi~v~~~g-~~l~~~Pp 404 (429)
T PRK06173 340 RIEAQLKQELAPA-AEFDSVAEVRVLGAIGVVEMKEPV-------------NMATLQPRFVEHGIWVRPFG-KLVYIMPP 404 (429)
T ss_pred HHHHHHHHHHHHh-hcCCCeeeeeccceEEEEEeCCcc-------------cHHHHHHHHHHCCeEEEecC-CEEEEeCC
Confidence 9999999999976 456777789999999999996421 12567889999999998875 35554 7
Q ss_pred CCCcHHHHHHHHHHHHHHHHHhh
Q 011856 453 LAHSSDDIQHTITAAEKVKMRFL 475 (476)
Q Consensus 453 ~~~t~e~i~~~~~~l~~~~~~~~ 475 (476)
+++|++|+++++++|++++.++.
T Consensus 405 l~it~~ei~~~~~~l~~~l~~~~ 427 (429)
T PRK06173 405 FIISPDELSQLTSGLLRVLKQEY 427 (429)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999998753
No 55
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=100.00 E-value=6.3e-62 Score=486.83 Aligned_cols=394 Identities=20% Similarity=0.211 Sum_probs=314.1
Q ss_pred ccCChhHHHHHHHHhhhCCCCCCCccccccccCCCCeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHH
Q 011856 47 NFTLKKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGE 126 (476)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~ 126 (476)
+...+++++++++++++++. +.+ ++|+++++++|+|+||.|||+||||.+++++.++||+||+|.+|+.+
T Consensus 16 ~~~~~~s~~l~~~~~~~~~~------~~~----~~p~~~~~a~G~~l~D~dG~~ylD~~sg~~~~~lGh~~p~i~~Ai~~ 85 (464)
T TIGR00699 16 EIPGPKSKAAMKQLNEVFDA------RAV----HFLADYEKSRGNYLVDVDGNRLLDLYSQISSIPIGYNNPALLKAAQS 85 (464)
T ss_pred CCCCccHHHHHHHHHhhhcc------cCc----ccceEEEecccCEEEeCCCCEEEEccCCHhhhcCCCCCHHHHHHHHH
Confidence 34467788999998877522 111 24999999999999999999999999999999999999999999998
Q ss_pred H-HH-hc-CCCCCCCHHHHHHHHHHHh----hCC-CCCeEEEeCCHHHHHHHHHHHHHhccC------------------
Q 011856 127 T-MK-KG-TSFGAPCLLENVLAEMVIS----AVP-SIEMVRFVNSGTEACMGVLRLARAFTG------------------ 180 (476)
Q Consensus 127 ~-l~-~~-~~~~~~~~~~~~la~~l~~----~~~-~~e~v~~~~sGseA~~~al~~ar~~~~------------------ 180 (476)
+ +. .. ....+.++...+|+++|.+ ..| +.++|+|+|||+||++.|+|+||.+++
T Consensus 86 q~~~~~l~~~~~~~~~~~~~la~~l~~~l~~~~p~~~~~v~f~~SGsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~ 165 (464)
T TIGR00699 86 PEMATTLINRPALGNFPSKDWAKILKEGILKVAPKGQDQVWTGMSGSDANELAFKAAFMYYRSKQRGYQADFSEEENESC 165 (464)
T ss_pred HHHHHhhcccccCCcHHHHHHHHHHHHhHHhhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCccccccccccccc
Confidence 5 33 32 2223566777888888754 666 578999999999999999999987621
Q ss_pred ---------CceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCc-----------eeeccCCCHHHHHHHH
Q 011856 181 ---------RERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYE-----------TLTAPFNDVSALENLF 240 (476)
Q Consensus 181 ---------~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~d~~~le~~l 240 (476)
+.+||.+.++|||++.+++..++........+...+........ ......++++.+++++
T Consensus 166 ~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l 245 (464)
T TIGR00699 166 MDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAFDWPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLI 245 (464)
T ss_pred ccccccCCcCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCceecCCCCcccccccccccchhHHHHHHHHHHHHH
Confidence 23899999999999999998877532111011001110000000 0001123577888999
Q ss_pred hcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccchhhccCCC--CchhhhhhhcC
Q 011856 241 ENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVT--PDLTTLGKIIG 317 (476)
Q Consensus 241 ~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~--pDi~t~sK~lg 317 (476)
+++++++++||+||+++++|.+.|+++||++|+++|++||++||+|||++|| |+|.+|+++++|+. |||+|+||+++
T Consensus 246 ~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGrtG~~fa~e~~gv~~~PDi~t~gK~lg 325 (464)
T TIGR00699 246 KKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQTGVGATGKFWAHEHWNLDDPPDMVTFSKKFQ 325 (464)
T ss_pred HhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeeeeeCCCCCcchhHHHhcCCCCCCCEEEehhhhc
Confidence 8766789999999999999999999999999999999999999999999999 99999999999997 99999999996
Q ss_pred -CCCcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcC-Cce
Q 011856 318 -GGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAG-HAI 395 (476)
Q Consensus 318 -~G~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~ 395 (476)
+|+. +++ +. +....+..+++||++||++|++++++|+.++++++.+++++++++|+++|+++..+++ .+.
T Consensus 326 ~gG~~----~~~-~~---~~~~~~~~~~~T~~gnp~~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~ 397 (464)
T TIGR00699 326 TAGYF----FHD-PA---FRPNKPYRQFNTWMGDPSRALILREIIQEIKRKDLLENVAHVGDYLYTGLEDLQKKYPEFIQ 397 (464)
T ss_pred cCCcc----ccc-hh---ccCCCCcccccCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCcee
Confidence 5653 223 22 2222345688999999999999999999999899999999999999999999988888 788
Q ss_pred Eee--eeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCCcceEE--eCCCcHHHHHHHHHHHHHHH
Q 011856 396 CGG--YISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAEKVK 471 (476)
Q Consensus 396 ~v~--~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~--~~~~t~e~i~~~~~~l~~~~ 471 (476)
+++ +.|+|+++++.+ ......+.+.++++|+++.+.+.+.+++ ++++|++|||+++++|++++
T Consensus 398 ~vRg~G~Glm~gie~~~-------------~~~~~~i~~~~~~~Gvl~~~~g~~~ir~~Ppl~it~~eid~~~~~l~~~~ 464 (464)
T TIGR00699 398 NLRGKGRGTFIAWDTPD-------------EAKRDKLLKKARNNGVNIGGCGVKAIRLRPMLVFQKHHADIFLEIISKII 464 (464)
T ss_pred eecccCeEEEEEEecCC-------------HHHHHHHHHHHHHCCcEEecCCCCeEEEeCCCCCCHHHHHHHHHHHHHhC
Confidence 999 999999999832 2234678899999999998876555655 79999999999999999864
No 56
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=6e-62 Score=490.60 Aligned_cols=377 Identities=27% Similarity=0.380 Sum_probs=323.5
Q ss_pred CCeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcCC--C-CCCCHHHHHHHHHHHhhCC-CCC
Q 011856 81 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTS--F-GAPCLLENVLAEMVISAVP-SIE 156 (476)
Q Consensus 81 ~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~--~-~~~~~~~~~la~~l~~~~~-~~e 156 (476)
.|+++.+++|+|+||.|||+||||.+++++.++||+||+|.+|+++|++++.. + +++++...+|+++|++.+| +.+
T Consensus 24 ~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~ 103 (423)
T PRK05964 24 PPIPIVRAEGAYLYLADGRELIDAISSWWVATHGHNHPYIDQAIREQLDRLDHVIFAGFTHEPAERLAQRLVALTPGGLD 103 (423)
T ss_pred CCeeEEeccccEEEeCCCCEEEEcchhHHhccCCCCCHHHHHHHHHHHhhCCCccccccCCHHHHHHHHHHHHhCCCCCC
Confidence 48999999999999999999999999999999999999999999999998542 2 4678889999999999998 578
Q ss_pred eEEEeCCHHHHHHHHHHHHHhc------cCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccC
Q 011856 157 MVRFVNSGTEACMGVLRLARAF------TGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPF 230 (476)
Q Consensus 157 ~v~~~~sGseA~~~al~~ar~~------~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (476)
+++|++||+||++.|+|+||.+ +++.+||.++++|||++.+++..++....... ..+.. .....+.+|+
T Consensus 104 ~v~f~~sGseA~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~---~~~~~--~~~~~~~~~~ 178 (423)
T PRK05964 104 HVFFSDSGSVAVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHAL---YTPLL--FEQVTAPFPP 178 (423)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCcccccc---ccCcC--CCCEEeCCCc
Confidence 9999999999999999999988 68899999999999999999887765332211 11111 1123455666
Q ss_pred CC-----HHHHHHHHhcCCCCeEEEEEcc-cCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccchhhcc
Q 011856 231 ND-----VSALENLFENNKGEIAAIILEP-VVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYF 303 (476)
Q Consensus 231 ~d-----~~~le~~l~~~~~~~a~vi~ep-~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~ 303 (476)
+| ++++++.++++++++++||+|| +++++|.+.++++||++|+++|++||++||+||||+|| |+|.+++++++
T Consensus 179 ~d~~~~~~~~l~~~l~~~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~ 258 (423)
T PRK05964 179 DGYEQATLDALEALLEKHAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTGTLFACEQA 258 (423)
T ss_pred chhHHHHHHHHHHHHHhCCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchhHHHhc
Confidence 77 8899999987667899999999 68999999999999999999999999999999999999 99988888999
Q ss_pred CCCCchhhhhhhcCCC-CcEEEEEecHHHHHhhcCC---CCccccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Q 011856 304 GVTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAPA---GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGE 379 (476)
Q Consensus 304 g~~pDi~t~sK~lg~G-~~iG~~~~~~~i~~~l~~~---~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~ 379 (476)
++.||++++||++++| +|+|++++++++++.+... ....+.+||++||+++++++++|+.++++++.+++++++++
T Consensus 259 ~v~pDi~~~~K~l~gG~~p~~av~~~~~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~l~~~~~~~~~~~~g~~ 338 (423)
T PRK05964 259 GVSPDIMCLSKGLTGGYLPLAATLCTAEIFEAFYSDDRAKAFMHSPSYTANPLACAAANASLDLFEDEPVLERVAALSAG 338 (423)
T ss_pred CCCCCeeeeehhhhcCcccceEEEEcHHHHHhhhcCCcccccccCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 9999999999999988 8999999999999988531 23457889999999999999999999888899999999999
Q ss_pred HHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCCcceEE--eCCCcH
Q 011856 380 LTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSS 457 (476)
Q Consensus 380 l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~--~~~~t~ 457 (476)
+++.|+++. +++.+.++++.|+|+++++.+++. ......+.+.|+++||++.+.+ +.+++ ++.+|+
T Consensus 339 l~~~l~~l~-~~~~i~~vrg~Gl~~~i~l~~~~~----------~~~~~~l~~~l~~~Gv~v~~~~-~~lR~~p~l~~t~ 406 (423)
T PRK05964 339 LAEGLEPFR-DLPGVADVRVLGAIGAVELDRPVL----------ERDGPALRAFALERGVLLRPLG-NTIYLMPPYIITA 406 (423)
T ss_pred HHHHHHhhc-cCCCeEEeecccEEEEEEeccCcc----------hhHHHHHHHHHHHCCeEEEecC-CEEEEeCCcccCH
Confidence 999999874 466677899999999999964310 0234678899999999998764 45665 578999
Q ss_pred HHHHHHHHHHHHHHHHh
Q 011856 458 DDIQHTITAAEKVKMRF 474 (476)
Q Consensus 458 e~i~~~~~~l~~~~~~~ 474 (476)
+|||+++++|+++++++
T Consensus 407 edId~~v~~l~~al~~~ 423 (423)
T PRK05964 407 EELDRITDAIVEVADEL 423 (423)
T ss_pred HHHHHHHHHHHHHHhhC
Confidence 99999999999999864
No 57
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=100.00 E-value=5.9e-62 Score=490.13 Aligned_cols=384 Identities=26% Similarity=0.340 Sum_probs=316.3
Q ss_pred CCeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcC---CCCCCCHHHHHHHHHHHhhCC-CCC
Q 011856 81 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT---SFGAPCLLENVLAEMVISAVP-SIE 156 (476)
Q Consensus 81 ~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~---~~~~~~~~~~~la~~l~~~~~-~~e 156 (476)
.|+++.+++|+|+||.|||+||||.+++++.++||+||+|.+|+.+|+++.. .+.+.++...+|+++|++.+| +.+
T Consensus 31 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~~~~~~~~~~la~~L~~~~p~~~~ 110 (445)
T PRK09221 31 APRLLVSAEGMYYTDADGRKILDGTAGLWCCNAGHGRPEIVEAVARQAATLDYAPAFQMGHPLAFELAERLAELAPGGLD 110 (445)
T ss_pred CCceEEeccccEEEeCCCCEEEEccccHhhccCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCC
Confidence 4899999999999999999999999999999999999999999999998843 234568888999999999997 478
Q ss_pred eEEEeCCHHHHHHHHHHHHHhcc------CCceEEEEeCCCCCCchhHHhhcCCCCccCCC-CCCCCCCCCCCCc-eeec
Q 011856 157 MVRFVNSGTEACMGVLRLARAFT------GRERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYE-TLTA 228 (476)
Q Consensus 157 ~v~~~~sGseA~~~al~~ar~~~------~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~-~~~~ 228 (476)
+|+|++||+||++.|+|+||.++ ++.+||.+.++|||++.+++..++.......+ +...++....... ....
T Consensus 111 ~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (445)
T PRK09221 111 HVFFTNSGSESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPEN 190 (445)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCcccccc
Confidence 99999999999999999999885 46789999999999999988877643222111 1111110000000 0000
Q ss_pred cCC---------CHHHHHHHHhcC-CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccccc
Q 011856 229 PFN---------DVSALENLFENN-KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG 297 (476)
Q Consensus 229 ~~~---------d~~~le~~l~~~-~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~ 297 (476)
++. ..++++++++.+ .+++++||+||+++++|.+.|+++||++|+++|++||++||+||||+|| |+|.+
T Consensus 191 ~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~ 270 (445)
T PRK09221 191 AFSKGQPEHGAELADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAA 270 (445)
T ss_pred ccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCchh
Confidence 010 146788888754 3689999999999999999999999999999999999999999999999 99999
Q ss_pred chhhccCCCCchhhhhhhcCCC-CcEEEEEecHHHHHhhcCCC----CccccCCCCCcHHHHHHHHHHHHHhcCCCHHHH
Q 011856 298 GAQEYFGVTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAPAG----PMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEY 372 (476)
Q Consensus 298 ~~~~~~g~~pDi~t~sK~lg~G-~~iG~~~~~~~i~~~l~~~~----~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~ 372 (476)
++++++++.||++|+||++++| +|+|++++++++++.+.... ...+.+||++||++|++++++|+.++++++.++
T Consensus 271 ~~~~~~gv~PDi~~~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~L~~i~~~~l~~~ 350 (445)
T PRK09221 271 FAAERFGVTPDIITFAKGLTNGAIPMGAVIASDEIYDAFMQGPEYAIEFFHGYTYSAHPVACAAGLATLDIYREEDLFER 350 (445)
T ss_pred hHHHhcCCCCCEEEeccccccCcccceeeEEcHHHHHhhccCcccccccccccCCCcCHHHHHHHHHHHHHHHhccHHHH
Confidence 9999999999999999999988 79999999999999875321 234778999999999999999999988899999
Q ss_pred HHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCCcceEE-
Q 011856 373 LNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT- 451 (476)
Q Consensus 373 ~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~- 451 (476)
+++++++++++|+++. +++.+.++++.|+|+++++...... +......+.+.|+++||++.+.+ +.+++
T Consensus 351 ~~~~g~~l~~~l~~l~-~~~~v~~vrg~Gl~~~v~~~~~~~~--------~~~~~~~~~~~~~~~Gv~~~~~~-~~lr~~ 420 (445)
T PRK09221 351 AAELAPYFEDAVHSLK-GLPHVIDIRNIGLVAGIELAPRPGA--------PGARGYEAFMKCFEKGLLVRYTG-DTIALS 420 (445)
T ss_pred HHHHHHHHHHHHHhhc-cCCCEEEEecCceEEEEEEeccccc--------ccchHHHHHHHHHHCCeEEeecC-CEEEEE
Confidence 9999999999999874 5677889999999999999642110 11223567889999999997754 35655
Q ss_pred -eCCCcHHHHHHHHHHHHHHHHHh
Q 011856 452 -SLAHSSDDIQHTITAAEKVKMRF 474 (476)
Q Consensus 452 -~~~~t~e~i~~~~~~l~~~~~~~ 474 (476)
++.+|++|||+++++|++++.++
T Consensus 421 Ppl~~t~~eid~~~~~l~~~l~~~ 444 (445)
T PRK09221 421 PPLIIEKAQIDELVDALGDALRAV 444 (445)
T ss_pred CCccCCHHHHHHHHHHHHHHHHhh
Confidence 68999999999999999999875
No 58
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=100.00 E-value=4.9e-62 Score=476.62 Aligned_cols=352 Identities=27% Similarity=0.370 Sum_probs=306.4
Q ss_pred CeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcCC--CCCCCHHHHHHHHHHHhhCCCCCeEE
Q 011856 82 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTS--FGAPCLLENVLAEMVISAVPSIEMVR 159 (476)
Q Consensus 82 p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~--~~~~~~~~~~la~~l~~~~~~~e~v~ 159 (476)
|+.+.+++|+|+||.|||+||||.+++++.++||+||+|.+|+.+|+++... ..++++...+|++++++.. +.++++
T Consensus 7 ~~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~la~~l~~~~-~~~~v~ 85 (364)
T PRK04013 7 RLRLVRGEGIYVWDSQGRRYLDLIAGIGVNVLGHNHPEWVEEMSEQLEKLVVAGPMFEHEEKEEMLEELSKWV-NYEYVY 85 (364)
T ss_pred CccEEEeecCEEEECCCCEEEEcccChhhccCCCCCHHHHHHHHHHHHhcCCccCCcCCHHHHHHHHHHHhhc-CCCEEE
Confidence 8899999999999999999999999999999999999999999999998533 2357888999999999988 578999
Q ss_pred EeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHH
Q 011856 160 FVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENL 239 (476)
Q Consensus 160 ~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~ 239 (476)
|+|||+||++.|+|+||.++++++||.++++|||++..++..++.......+ . ....++..+|++|++++++.
T Consensus 86 ~~~SGseA~e~Alklar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~--~-----p~~~~~~~~~~~d~~~l~~~ 158 (364)
T PRK04013 86 MGNSGTEAVEAALKFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDF--E-----PLVPGFKHIPFNDVEAAKEA 158 (364)
T ss_pred EeCchHHHHHHHHHHHHHHhCCCEEEEECCccccCchhhccCCCCcccccCC--C-----CCCCCcEEecCCCHHHHHHH
Confidence 9999999999999999999999999999999999999988776653222111 0 11124667889999999998
Q ss_pred HhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCccccccchhhccCCCCchhhhhhhcCCC
Q 011856 240 FENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIGGG 319 (476)
Q Consensus 240 l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pDi~t~sK~lg~G 319 (476)
+. +++++||+||+++++|.+.++++||++|+++|++||++||+|||++|||+|.+|+++++++.||++|+||++++|
T Consensus 159 i~---~~~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~RtG~~~a~~~~gv~PDiv~~gK~lggG 235 (364)
T PRK04013 159 IT---KETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGLRTGKFLAIEHYKVEPDIVTMGKGIGNG 235 (364)
T ss_pred hc---CCcEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCCCchhHHHhcCCCCCEEEecccccCC
Confidence 86 379999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCceEeee
Q 011856 320 LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGY 399 (476)
Q Consensus 320 ~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~ 399 (476)
+|+|+++.++++ . +..+++||++||++|++++++|+.++++++.+++++. |.++. .+.+.+++|
T Consensus 236 ~P~~a~~~~~~~----~---~~~~~~T~~gnp~~~aaa~a~l~~i~~~~l~~~~~~~-------l~~l~--~~~v~~vRG 299 (364)
T PRK04013 236 VPVSLTLTNFDV----E---RGKHGSTFGGNPLACKAVAVTLRILRRERLVEKAGEK-------FIEIK--GERVVTTRG 299 (364)
T ss_pred ceeEEEEecccc----c---CCCcCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHH-------HHHhc--cCcceeeee
Confidence 999999998775 1 2358899999999999999999999999999988764 23332 266889999
Q ss_pred eceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCCcceEE--eCCCcHHHHHHHHHHHHHHHHHhh
Q 011856 400 ISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAEKVKMRFL 475 (476)
Q Consensus 400 ~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~--~~~~t~e~i~~~~~~l~~~~~~~~ 475 (476)
.|+|++++|.++ ...+.+.++++|+++.+.+.+.+++ ++++|++|+++++++|++++++++
T Consensus 300 ~Gl~~gve~~~~---------------~~~i~~~~~~~Gll~~~~g~~vlr~~Ppl~it~~~i~~~~~~l~~~l~~~~ 362 (364)
T PRK04013 300 RGLMIGIVLKKP---------------VGKYVEELQNRGYLVHTAGQRVIRLLPPLIISKDTMEEAKSAIEGVINDIL 362 (364)
T ss_pred CcEEEEEEeCCc---------------HHHHHHHHHhCCcEEeeCCCCEEEEeCCcccCHHHHHHHHHHHHHHHHHHh
Confidence 999999999531 2467889999999998876555655 799999999999999999998764
No 59
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=100.00 E-value=8.4e-62 Score=486.26 Aligned_cols=369 Identities=24% Similarity=0.365 Sum_probs=313.4
Q ss_pred CCeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhc-CC--CCCCCHHHHHHHHHHHhhC--C-C
Q 011856 81 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKG-TS--FGAPCLLENVLAEMVISAV--P-S 154 (476)
Q Consensus 81 ~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~-~~--~~~~~~~~~~la~~l~~~~--~-~ 154 (476)
+|+++.+++|+|+||.|||+||||.+++++.++||+||+|.+|+++|+++. .. ....++...+|+++|.+.. | +
T Consensus 17 ~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~lae~l~~~~~~~~~ 96 (412)
T TIGR02407 17 FPTVFEKAKGSTLWDEDGKEYIDFFAGAGALNYGHNNPKLKQALIDYLADDGIIHSLDMATEAKREFLETFNEIILKPRG 96 (412)
T ss_pred CCceEEecccCEEEeCCCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhccceeccccCcHHHHHHHHHHHHhccCccC
Confidence 489999999999999999999999999999999999999999999999863 21 2245788899999999975 3 2
Q ss_pred C-CeEEE-eCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccC--
Q 011856 155 I-EMVRF-VNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPF-- 230 (476)
Q Consensus 155 ~-e~v~~-~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 230 (476)
. ++++| +|||+||++.|+|+||.+++|.+||.++++|||++.+++..++.......+ +.+ ...+..+|+
T Consensus 97 ~~~~~~f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~----~~~---~~~~~~~p~~~ 169 (412)
T TIGR02407 97 LDYKVQFPGPTGTNAVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGA----GVP---LSNVSRMPYDG 169 (412)
T ss_pred CCceEEEeCCCchHHHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCC----CCC---CCCeEECCCCC
Confidence 2 36766 499999999999999999999999999999999999999887753322111 111 113455555
Q ss_pred ------CCHHHHHHHHhcCC---CCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccchh
Q 011856 231 ------NDVSALENLFENNK---GEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQ 300 (476)
Q Consensus 231 ------~d~~~le~~l~~~~---~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~ 300 (476)
++++.+++++++++ +++++||+||+++++|.+.++++||++|+++|++||++||+||||+|| |+|.++++
T Consensus 170 ~~~~~~~~~~~l~~~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~ 249 (412)
T TIGR02407 170 YLGGDVDTIAYFEKLLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGTFFSF 249 (412)
T ss_pred ccccchhHHHHHHHHHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhHHh
Confidence 34788999987543 468999999999999999999999999999999999999999999999 99999999
Q ss_pred hccCCCCchhhhhhhcCC-CCcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHH-hcCCCHHHHHHHHHH
Q 011856 301 EYFGVTPDLTTLGKIIGG-GLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKR-LKEPGTYEYLNKITG 378 (476)
Q Consensus 301 ~~~g~~pDi~t~sK~lg~-G~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~-~~~~~~~~~~~~~~~ 378 (476)
+++++.||++++||++++ |+|+|++++++++ +.+. ...+.+||++||++|+++.++|+. ++++++.++++++++
T Consensus 250 ~~~~v~PDi~~~~K~lg~~G~pigav~~~~~~-~~~~---~~~~~~T~~gnpl~~aaa~a~l~~~i~~~~l~~~~~~~g~ 325 (412)
T TIGR02407 250 EPAGIEPDIVCLSKSISGYGLPLALTLIKPEL-DVWK---PGEHNGTFRGNNLAFVTATAALEYYWSDDAFEKAVQRKSE 325 (412)
T ss_pred cccCCCCCEEEechhccCCccceeEEEEchhh-hccC---CCccCCCCCccHHHHHHHHHHHHHHhcccHHHHHHHHHHH
Confidence 999999999999999998 9999999999886 5554 345788999999999999999995 777889999999999
Q ss_pred HHHHHHHHHhhhcC-CceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCC--cceEE--eC
Q 011856 379 ELTQGIIDAGKKAG-HAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF--EAGFT--SL 453 (476)
Q Consensus 379 ~l~~~L~~~~~~~~-~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~--~~~~~--~~ 453 (476)
+++++|+++..+++ .+.++++.|+|+++++.+ ......+...|+++||++.+.+. +.+++ ++
T Consensus 326 ~l~~~l~~l~~~~~~~~~~vrg~Gl~~~l~l~~-------------~~~~~~~~~~~~~~Gv~v~~~~~~~~~lr~~p~l 392 (412)
T TIGR02407 326 IIQERLDRIVAEYPELIKQVRGRGLMQGIECGD-------------GDLAGKIAKAAFENGLIIETSGPNDEVIKLLPPL 392 (412)
T ss_pred HHHHHHHHHHhhCCCceEeeecceeEEEEEecC-------------hHHHHHHHHHHHHCCCEEeccCCCCCEEEEECCC
Confidence 99999999887776 678999999999999953 22346788999999999987543 34554 78
Q ss_pred CCcHHHHHHHHHHHHHHHHH
Q 011856 454 AHSSDDIQHTITAAEKVKMR 473 (476)
Q Consensus 454 ~~t~e~i~~~~~~l~~~~~~ 473 (476)
.+|++|+++++++|++++++
T Consensus 393 ~~t~~~i~~~~~~l~~~l~~ 412 (412)
T TIGR02407 393 TIDEETLQQGLDILEQAVEE 412 (412)
T ss_pred CCCHHHHHHHHHHHHHHHhC
Confidence 99999999999999999864
No 60
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=6.3e-62 Score=486.71 Aligned_cols=375 Identities=20% Similarity=0.285 Sum_probs=310.6
Q ss_pred CCeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcCC--C-CCCCHHHHHHHHHHHhhCC-CCC
Q 011856 81 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTS--F-GAPCLLENVLAEMVISAVP-SIE 156 (476)
Q Consensus 81 ~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~--~-~~~~~~~~~la~~l~~~~~-~~e 156 (476)
+|+++++++|+|+||.|||+||||.+++++.++||+||+|.+|+.+|+++..+ + +..++...+|+++|++..| +.+
T Consensus 22 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~ 101 (422)
T PRK05630 22 RNRLVTSTDGVFLTLEDGSTVIDAMSSWWSAAHGHGHPRLKAAAHKQIDTMSHVMFGGLTHEPAIKLTRKLLNLTDNGLD 101 (422)
T ss_pred CCeeEEeceeeEEEECCCCEEEEcchhHHHhcCCCCCHHHHHHHHHHHHhCCCcccCCcCCHHHHHHHHHHHhhCCCCcC
Confidence 58999999999999999999999999999999999999999999999998532 2 3567888999999999987 478
Q ss_pred eEEEeCCHHHHHHHHHHHHHhcc------CCceEEEEeCCCCCCchhHHhhcCCCC-ccCCC-CCCCCCCCCCCCceeec
Q 011856 157 MVRFVNSGTEACMGVLRLARAFT------GRERIIKFEGCYHGHADPFLVKAGSGV-ATLGL-PDSPGVPKGATYETLTA 228 (476)
Q Consensus 157 ~v~~~~sGseA~~~al~~ar~~~------~~~~ii~~~~~yhg~~~~~~~~~g~~~-~~~~~-~~~~~~~~~~~~~~~~~ 228 (476)
+++|++||+||++.|+|+||.++ ++.+||.+.++|||.+.+++..++... ....+ |...+............
T Consensus 102 ~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 181 (422)
T PRK05630 102 HVFYSDSGSVSVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPVRGS 181 (422)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCcccCC
Confidence 99999999999999999999885 578899999999999999988765321 11000 11111100000000011
Q ss_pred cCCC----HHHHHHHHhcCCCCeEEEEEccc-CCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccchhhc
Q 011856 229 PFND----VSALENLFENNKGEIAAIILEPV-VGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEY 302 (476)
Q Consensus 229 ~~~d----~~~le~~l~~~~~~~a~vi~ep~-~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~ 302 (476)
++++ .+.+++++. +++++||+||+ ++.+|.+.|+++|+++|+++|++||++||+||||+|| |+|.+|++++
T Consensus 182 ~~~~~~~~~~~~~~~~~---~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~ 258 (422)
T PRK05630 182 SPQEISEYLRSLELLID---ETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTGELFATLA 258 (422)
T ss_pred ChHHHHHHHHHHHHHHh---hceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCchhhHHHh
Confidence 1222 244555554 37999999996 9999999999999999999999999999999999999 9999999999
Q ss_pred cCCCCchhhhhhhcCCC-CcEEEEEecHHHHHhhcCC---CCccccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Q 011856 303 FGVTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAPA---GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITG 378 (476)
Q Consensus 303 ~g~~pDi~t~sK~lg~G-~~iG~~~~~~~i~~~l~~~---~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~ 378 (476)
+|+.|||+|+||+++|| +|+|++++++++++.+... +.+.|++||++||++|++++++|+.++++++.++++++++
T Consensus 259 ~gv~PDi~t~gK~l~gG~~p~~av~~~~~i~~~~~~~~~~~~~~h~~T~~g~Pla~aaa~aaL~~l~~~~~~~~~~~~g~ 338 (422)
T PRK05630 259 AGVTPDIMCVGKALTGGFMSFAATLCTDKVAQLISTPNGGGALMHGPTFMANPLACAVAHASLEIIETGMWRKQVKRIEA 338 (422)
T ss_pred cCCCCCeeeeechhhcCccccceeeccHHHHHHHhccCCCCccccCCCCcCCHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 99999999999999999 5999999999999988531 2346889999999999999999999988899999999999
Q ss_pred HHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCCcceEE--eCCCc
Q 011856 379 ELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHS 456 (476)
Q Consensus 379 ~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~--~~~~t 456 (476)
+|++.|+++. +++.+.++++.|+|+++++.++. ....+.+.++++|+++.+.+ +.+++ ++++|
T Consensus 339 ~l~~~L~~l~-~~~~v~~vRg~Gl~~~ie~~~~~-------------~~~~~~~~~~~~Gl~~~~~g-~~l~~~PpL~it 403 (422)
T PRK05630 339 ELIAGLSPLA-HLPGVADVRVLGAIGVVEMEQPV-------------DMEEATQAAVDHGVWLRPFG-RLVYVMPPYITT 403 (422)
T ss_pred HHHHHHHHhh-cCCCeeeeeccccEEEEEECCcc-------------cHHHHHHHHHHCCeEEEecC-CEEEEECCccCC
Confidence 9999999764 47778899999999999996421 12467889999999998765 45554 79999
Q ss_pred HHHHHHHHHHHHHHHHH
Q 011856 457 SDDIQHTITAAEKVKMR 473 (476)
Q Consensus 457 ~e~i~~~~~~l~~~~~~ 473 (476)
++|+|+++++|++++++
T Consensus 404 ~~~i~~~~~~l~~al~~ 420 (422)
T PRK05630 404 SEQIAQICAALAAAVKA 420 (422)
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 99999999999999865
No 61
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=2.6e-61 Score=479.60 Aligned_cols=363 Identities=27% Similarity=0.425 Sum_probs=310.8
Q ss_pred CCeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcCC--CCCCCHHHHHHHHHHHhhCCCCCeE
Q 011856 81 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTS--FGAPCLLENVLAEMVISAVPSIEMV 158 (476)
Q Consensus 81 ~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~--~~~~~~~~~~la~~l~~~~~~~e~v 158 (476)
.|+++.+++|+|+||.|||+||||.++++++++||+||+|.+|+.+|+++..+ ....++.+.+|++++.+.. +.+++
T Consensus 18 ~~~~~~~~~G~~~~d~dG~~~lD~~sg~~~~~lGh~~p~v~~a~~~q~~~~~~~~~~~~~~~~~~la~~l~~~~-~~~~v 96 (395)
T PRK03715 18 PDIVFTHGKGSWLYDHNGKRYLDFIQGWAVNCLGHCNPGMVEALAAQAEKLINPSPAFYNEPMAKLAGLLTQHS-CFDKV 96 (395)
T ss_pred CCceEEeeecCEEEECCCCEEEECCcChhhccCCCCCHHHHHHHHHHHHhcccccccccCHHHHHHHHHHhhcc-CCCEE
Confidence 47899999999999999999999999999999999999999999999987432 2346788999999998875 56899
Q ss_pred EEeCCHHHHHHHHHHHHHhcc-----CCceEEEEeCCCCCCchhHHhhcCCCCccCCC-CCCCCCCCCCCCceeeccCCC
Q 011856 159 RFVNSGTEACMGVLRLARAFT-----GRERIIKFEGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTAPFND 232 (476)
Q Consensus 159 ~~~~sGseA~~~al~~ar~~~-----~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d 232 (476)
+|++||+||++.|++++|.++ ++.+||.++++|||++...+..++.......+ |... .+...+++|
T Consensus 97 ~f~~SGseA~e~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~--------~~~~~~~~d 168 (395)
T PRK03715 97 FFANSGAEANEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVP--------GFPKAELND 168 (395)
T ss_pred EEeCCcHHHHHHHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCC--------CceeeCCch
Confidence 999999999999999999773 66889999999999999999887754322111 1111 234457889
Q ss_pred HHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccchhhccCCCCchhh
Q 011856 233 VSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTT 311 (476)
Q Consensus 233 ~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pDi~t 311 (476)
++++++.++ +++++||+||+++++|.+.|+++|+++|+++|++||++||+||||+|| |+|.+|+++++|+.||++|
T Consensus 169 ~~~l~~~l~---~~~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~~a~~~~gv~PDi~t 245 (395)
T PRK03715 169 IASVEKLIT---DKTVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLFAYELSGIEPDIMT 245 (395)
T ss_pred HHHHHHHcC---CCceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcchhhHhhcCCCCceee
Confidence 999999886 369999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred hhhhcCCCCcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhc
Q 011856 312 LGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKA 391 (476)
Q Consensus 312 ~sK~lg~G~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 391 (476)
+||++++|+|+|+++++++++. +. +..+++||++||++|++++++|+.++++++++++++++++|+++|+++..++
T Consensus 246 ~gK~lg~G~p~~av~~~~~i~~-~~---~~~~~~T~~g~pl~~aaala~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~ 321 (395)
T PRK03715 246 LGKGIGGGVPLAALLAKAEVAV-FE---AGDQGGTYNGNPLMTAVGVAVISQLLAPGFLEGVRARGEYLKEKLLELSEER 321 (395)
T ss_pred ehhhhhCCcceEEEEEcccccc-cc---CCCcCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhcC
Confidence 9999999999999999999863 32 3357889999999999999999999889999999999999999999987777
Q ss_pred CCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHC---CeEeccCCCcceEE--eCCCcHHHHHHHHHH
Q 011856 392 GHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEE---GVYFAPSQFEAGFT--SLAHSSDDIQHTITA 466 (476)
Q Consensus 392 ~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---Gv~~~~~~~~~~~~--~~~~t~e~i~~~~~~ 466 (476)
+ +.++++.|+|+++++.++ ....+.+.+.+. |+++.+...+.+|+ ++.+|++|||+++++
T Consensus 322 ~-i~~vrG~Glm~~i~l~~~--------------~~~~~~~~~~~~~~~Gi~~~~~~~~~lR~~p~l~~t~~ei~~~~~~ 386 (395)
T PRK03715 322 G-LEGERGEGLLRALLLGKD--------------IGPQIVEKARDMQPDGLLLNAPRPNLLRFMPALNVTTEEIDQMIAM 386 (395)
T ss_pred C-cCeEEcceeEEEEEecCc--------------hHHHHHHHHHhccCCCEEEeecCCCEEEEeCCcccCHHHHHHHHHH
Confidence 6 457899999999999642 112344444444 99997666566666 789999999999999
Q ss_pred HHHHHHHh
Q 011856 467 AEKVKMRF 474 (476)
Q Consensus 467 l~~~~~~~ 474 (476)
|+++++++
T Consensus 387 l~~~l~~~ 394 (395)
T PRK03715 387 LRSVLDKL 394 (395)
T ss_pred HHHHHHhh
Confidence 99999875
No 62
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=100.00 E-value=4.7e-61 Score=481.93 Aligned_cols=369 Identities=26% Similarity=0.364 Sum_probs=320.9
Q ss_pred CCeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcC--CCCCCCHHHHHHHHHHHhhCCCCCeE
Q 011856 81 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT--SFGAPCLLENVLAEMVISAVPSIEMV 158 (476)
Q Consensus 81 ~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~--~~~~~~~~~~~la~~l~~~~~~~e~v 158 (476)
+|+++.+++|+|+||.|||+||||.+++++++|||+||+|.+|+.+++++.. ..++.++...+|+++|++.. +.+++
T Consensus 21 ~~~~~~~~~G~~~~d~dG~~~lD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~-~~~~v 99 (406)
T PRK12381 21 APFIPVRGEGSRLWDQQGKEYIDFAGGIAVNALGHAHPALREALNEQASKFWHTGNGYTNEPVLRLAKKLIDAT-FADRV 99 (406)
T ss_pred CCceEEEeecCEEEeCCCCEEEEcCcCHhhccCCCCCHHHHHHHHHHHhhcccccCccCCHHHHHHHHHHHhhC-CCCeE
Confidence 4889999999999999999999999999999999999999999999998743 23355777899999999987 56899
Q ss_pred EEeCCHHHHHHHHHHHHHhcc------CCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCC
Q 011856 159 RFVNSGTEACMGVLRLARAFT------GRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFND 232 (476)
Q Consensus 159 ~~~~sGseA~~~al~~ar~~~------~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 232 (476)
+|++||+||++.|+|+||.++ ++.+|+.++++|||++...+..++.......+ .. ....+..+|++|
T Consensus 100 ~~~~sGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~---~~----~~~~~~~~~~~d 172 (406)
T PRK12381 100 FFCNSGAEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDF---AP----LPPDIRHAAYND 172 (406)
T ss_pred EEcCCcHHHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCC---CC----CCCCeeEeCCCC
Confidence 999999999999999999885 78899999999999999888877753322111 11 122457789999
Q ss_pred HHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccchhhccCCCCchhh
Q 011856 233 VSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTT 311 (476)
Q Consensus 233 ~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pDi~t 311 (476)
++++++.++ +++++||+||+++++|.+.++++|+++|+++|++||++||+||+|+|| |+|.+++++++++.||++|
T Consensus 173 ~~~l~~~l~---~~~aaviiEPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~~~~~~~~~v~pDi~t 249 (406)
T PRK12381 173 LNSASALID---DQTCAVIVEPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDVLT 249 (406)
T ss_pred HHHHHHhcc---CCeeEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcchhhhHhhCCCCCEEE
Confidence 999999986 379999999999999999999999999999999999999999999999 9998888888999999999
Q ss_pred hhhhcCCCCcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhc
Q 011856 312 LGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKA 391 (476)
Q Consensus 312 ~sK~lg~G~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 391 (476)
|||++++|+|+|++++++++++.+. ...+.+||++||++++++.++|+.++++++++++++++++++++|+++..++
T Consensus 250 ~sK~l~gG~~ig~~~~~~~~~~~~~---~~~~~~t~~~~pl~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~ 326 (406)
T PRK12381 250 TAKALGGGFPIGAMLTTEKCASVMT---VGTHGTTYGGNPLASAVAGKVLELINTPEMLNGVKQRHDWFVERLNTINARY 326 (406)
T ss_pred ehhhhhCCCceEEEEEcHHHHhhcC---CCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhC
Confidence 9999999999999999999999886 3456789999999999999999999878899999999999999999987777
Q ss_pred CCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCCcceEE--eCCCcHHHHHHHHHHHHH
Q 011856 392 GHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAEK 469 (476)
Q Consensus 392 ~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~--~~~~t~e~i~~~~~~l~~ 469 (476)
+.+.++++.|+|+++++.++ .......+.+.|+++||++.+.+.+.+|+ ++.+|+++|++++++|++
T Consensus 327 ~~~~~vrg~Gl~~~~~l~~~-----------~~~~~~~~~~~l~~~Gv~v~~~g~~~lRl~p~~~~t~~~i~~~~~~l~~ 395 (406)
T PRK12381 327 GLFSEIRGLGLLIGCVLNAE-----------YAGKAKQISQEAAKAGVMVLIAGPNVVRFAPALNISEEEITTGLDRFAR 395 (406)
T ss_pred CCEEEEecCeEEEEEEecCc-----------hhhHHHHHHHHHHHCCcEEeeCCCCEEEEeCCccCCHHHHHHHHHHHHH
Confidence 77788999999999998532 01234678889999999998766566776 577999999999999999
Q ss_pred HHHHh
Q 011856 470 VKMRF 474 (476)
Q Consensus 470 ~~~~~ 474 (476)
+++++
T Consensus 396 ~l~~~ 400 (406)
T PRK12381 396 ACERF 400 (406)
T ss_pred HHHHH
Confidence 98765
No 63
>PLN00144 acetylornithine transaminase
Probab=100.00 E-value=2.7e-61 Score=478.30 Aligned_cols=362 Identities=24% Similarity=0.385 Sum_probs=315.9
Q ss_pred EEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcCCCC--CCCHHHHHHHHHHHhhCCCCCeEEEeC
Q 011856 85 FDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFG--APCLLENVLAEMVISAVPSIEMVRFVN 162 (476)
Q Consensus 85 ~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~~--~~~~~~~~la~~l~~~~~~~e~v~~~~ 162 (476)
+.+++|+|+||.|||+||||.+++++.++||+||+|.+|+.+|++++.... +.++...+|+++|++.. +.++|+|++
T Consensus 1 ~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~la~~l~~~~-~~~~v~f~~ 79 (382)
T PLN00144 1 FVSGKGCKLYDVEGKEYLDMAAGIAVNALGHGDPDWVKAVAEQAGTLAHVSNVYHTIPQVELAKRLVASS-FADRVFFCN 79 (382)
T ss_pred CeeeeccEEEeCCCCEEEECCcCHHhccCCCCCHHHHHHHHHHHHhcCCccccccCHHHHHHHHHHHhcC-CCCeEEEeC
Confidence 468999999999999999999999999999999999999999999854332 45788899999999887 468999999
Q ss_pred CHHHHHHHHHHHHHhccC-------------CceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeecc
Q 011856 163 SGTEACMGVLRLARAFTG-------------RERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAP 229 (476)
Q Consensus 163 sGseA~~~al~~ar~~~~-------------~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (476)
||+||++.|+|+||.+++ +.+||.++++|||++.+++..++...... +..+.. ..+..+|
T Consensus 80 sGseA~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~--~~~~~~-----~~~~~~~ 152 (382)
T PLN00144 80 SGTEANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRT--PFEPLM-----PGVTFVE 152 (382)
T ss_pred CcHHHHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccc--cCCCCC-----CCeEEeC
Confidence 999999999999999875 46899999999999999998776532221 111111 2367789
Q ss_pred CCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccchhhccCCCCc
Q 011856 230 FNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPD 308 (476)
Q Consensus 230 ~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pD 308 (476)
+||+++|++.++. +++++||+||+++++|.+.++++|+++|+++|++||+++|+||+|+|| |+|.+++++++++.||
T Consensus 153 ~~d~~~l~~~~~~--~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~PD 230 (382)
T PLN00144 153 YGNLEAARKLIQK--GKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGYLWAHEAYGVEPD 230 (382)
T ss_pred CCCHHHHHHhcCC--CCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchHhhhhhcCCCCC
Confidence 9999999999863 479999999999999999999999999999999999999999999999 9998888888999999
Q ss_pred hhhhhhhcCCCCcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHh
Q 011856 309 LTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAG 388 (476)
Q Consensus 309 i~t~sK~lg~G~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~ 388 (476)
++||||++++|+|+|++++++++++.+.. ..+.+||++||++|+++.++|+.++++++.++++++++++++.|+++.
T Consensus 231 i~t~sK~l~~G~pig~v~~~~~~~~~~~~---~~~~~T~~~~pl~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~l~~~~ 307 (382)
T PLN00144 231 IMTLAKPLAGGLPIGAVLVTEKVASAINP---GDHGSTFAGGPLVCNAALAVLDKISKPGFLASVAKKGEYLRELLRRKL 307 (382)
T ss_pred EEEecccccCCcceEEEEEcHHHHhccCC---CCCCCCCCCCHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998863 347789999999999999999999889999999999999999999988
Q ss_pred hhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCC-cceEE--eCCCcHHHHHHHHH
Q 011856 389 KKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-EAGFT--SLAHSSDDIQHTIT 465 (476)
Q Consensus 389 ~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~-~~~~~--~~~~t~e~i~~~~~ 465 (476)
.+++.+.++++.|+|++++|... ...+.+.++++||++.+++. +.+++ ++++++++++++++
T Consensus 308 ~~~~~~~~vrg~G~~~~l~l~~~---------------~~~~~~~~~~~Gv~i~~~~~~~~lrl~p~~~~~~~~i~~~~~ 372 (382)
T PLN00144 308 GGNPHVKEVRGVGLLVGIQLDVP---------------AGPLVDACRDSGLLVLTAGKGDVVRLVPPLVISEAELEQAVE 372 (382)
T ss_pred hhCCCceeeecCceEEEEEecCc---------------cHHHHHHHHHCCeEEeecCCCCEEEEeCCCccCHHHHHHHHH
Confidence 88888889999999999999311 14688899999999998753 55655 57789999999999
Q ss_pred HHHHHHHHh
Q 011856 466 AAEKVKMRF 474 (476)
Q Consensus 466 ~l~~~~~~~ 474 (476)
+|++++.++
T Consensus 373 ~l~~~l~~~ 381 (382)
T PLN00144 373 ILADCLPAL 381 (382)
T ss_pred HHHHHHHhc
Confidence 999998764
No 64
>PRK06149 hypothetical protein; Provisional
Probab=100.00 E-value=2.5e-61 Score=526.60 Aligned_cols=408 Identities=22% Similarity=0.278 Sum_probs=334.8
Q ss_pred hhHHHHHHHHhhhCCCCCCCccccccccCCCCeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHh
Q 011856 51 KKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKK 130 (476)
Q Consensus 51 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~ 130 (476)
+++.+++++.+++++.+.... + ..|+++++++|+|+||.|||+||||.+++ ..+||+||+|.+|+.+|+.+
T Consensus 544 ~~~~~l~~~~~~~~~~~~~~~---~----~~p~~i~~g~G~~l~D~dG~~ylD~~~~~--~~lGh~hp~v~~Ai~~q~~~ 614 (972)
T PRK06149 544 PDAAALLARRDASFARVQKHY---Y----ADPPQIERGWRHHLFDMAGRSYLDMVNNV--TVLGHGHPRLAAAAARQWSL 614 (972)
T ss_pred CCHHHHHHHHHHhhccchhhc---c----cCCCeEEEeeeeEEEeCCCCEEEECCCCc--cccCCCCHHHHHHHHHHHHh
Confidence 467889999988887665322 1 24789999999999999999999999886 47999999999999999998
Q ss_pred cCCCC-CCCHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCcc
Q 011856 131 GTSFG-APCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVAT 208 (476)
Q Consensus 131 ~~~~~-~~~~~~~~la~~l~~~~~-~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~ 208 (476)
+...+ +..+...+|+++|++.+| +.++++|+|||+|||+.|+|+||.++++.+||.++++|||++.+++..++.....
T Consensus 615 l~~~~~~~~~~~~elae~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~ 694 (972)
T PRK06149 615 LNTNSRFHYAAVAEFSERLAALAPDGLDTVFLVNSGSEANDLAIRLAWAASGRRDVVSVLEAYHGWTVATDAVSTSIADN 694 (972)
T ss_pred ccccccccCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHHHhcCCCeEEEEeCCCCCcChhHhhhcCCcccc
Confidence 64332 567888999999999998 5789999999999999999999999999999999999999998887665431100
Q ss_pred CCC--CCCCCCCCCCCCceeeccCC--C-----HHHHHHHHh---cCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHH
Q 011856 209 LGL--PDSPGVPKGATYETLTAPFN--D-----VSALENLFE---NNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRIT 276 (476)
Q Consensus 209 ~~~--~~~~~~~~~~~~~~~~~~~~--d-----~~~le~~l~---~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~ 276 (476)
... +...++......+.+..+++ + .+++++.++ ++++++++||+||+++++|.+.++++||++|+++|
T Consensus 695 ~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc 774 (972)
T PRK06149 695 PQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAV 774 (972)
T ss_pred ccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHH
Confidence 000 00111111112233333442 2 345554443 34568999999999999999999999999999999
Q ss_pred HHhCCEEEEeccccCc-cccc-cchhhccCCCCchhhhhhhcCCCCcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHH
Q 011856 277 KENGALLIFDEVMTGF-RLAY-GGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAM 354 (476)
Q Consensus 277 ~~~g~llI~DEv~~g~-r~g~-~~~~~~~g~~pDi~t~sK~lg~G~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~ 354 (476)
++||+++|+||||||| |+|. +++++++|+.|||+|+||++|+|+|+|++++++++++.+... ..+++|+++||++|
T Consensus 775 ~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv~PDivt~gK~lg~G~Pl~av~~~~~i~~~~~~~--~~~~sT~~gnP~~~ 852 (972)
T PRK06149 775 RARGGVCIADEVQVGYGRLGHYFWGFEQQGVVPDIITMAKGMGNGHPLGAVITRREIAEALEAE--GYFFSSTGGSPVSC 852 (972)
T ss_pred HHcCCEEEEEeehhcCCccCccchhhhhcCCCCCEEEecccccCCeeeEEEEEcHHHHhhhccC--CcccCCCCCCHHHH
Confidence 9999999999999999 9997 668999999999999999999999999999999999988642 24567889999999
Q ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHH
Q 011856 355 TAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGM 434 (476)
Q Consensus 355 aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l 434 (476)
++++++|++++++++.+++++++++|+++|+++..+++++.+++|.|+|++++|..+... ..++......+.+.|
T Consensus 853 aaala~L~~i~~e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~Gl~~gvel~~~~~~-----~~~~~~~~~~i~~~l 927 (972)
T PRK06149 853 RIGMAVLDVLREEKLQENARRVGDHLKARLEALADRHPLIGAVHGMGLYLGVELVRDRQT-----LEPATEETAAICDRL 927 (972)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeecceEEEEEEecCccc-----CCCChHHHHHHHHHH
Confidence 999999999999999999999999999999999888999999999999999999643211 113445567889999
Q ss_pred HHCCeEeccCCC--cceEE--eCCCcHHHHHHHHHHHHHHHHHh
Q 011856 435 LEEGVYFAPSQF--EAGFT--SLAHSSDDIQHTITAAEKVKMRF 474 (476)
Q Consensus 435 ~~~Gv~~~~~~~--~~~~~--~~~~t~e~i~~~~~~l~~~~~~~ 474 (476)
+++||++.+.+. +.+++ ++++|++++|+++++|++++.+.
T Consensus 928 ~~~Gvl~~~~g~~~~vl~~~Ppl~it~~~id~~~~~l~~~l~~~ 971 (972)
T PRK06149 928 LELGVIMQPTGDHLNILKIKPPLCLDRESADFFVDMLDRVLTEG 971 (972)
T ss_pred HhCCeEEeecCCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHhh
Confidence 999999998764 34554 78999999999999999999764
No 65
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=100.00 E-value=5.1e-61 Score=482.96 Aligned_cols=371 Identities=25% Similarity=0.381 Sum_probs=311.9
Q ss_pred CCeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhc-C--CCCCCCHHHHHHHHHHHhhCC---C
Q 011856 81 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKG-T--SFGAPCLLENVLAEMVISAVP---S 154 (476)
Q Consensus 81 ~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~-~--~~~~~~~~~~~la~~l~~~~~---~ 154 (476)
+|+++.+++|+|+||.|||+||||.+++++.++||+||+|.+|+++|+++. . .....++...+|+++|++.++ +
T Consensus 21 ~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~lae~l~~~~~~~~~ 100 (425)
T PRK09264 21 FPVVFDKAKGSWLYDEDGKEYIDFFAGAGALNYGHNNPVLKQALIDYLQRDGITHGLDMHTTAKREFLETFEETILKPRG 100 (425)
T ss_pred CCccEEeeecCEEEeCCCCEeeecccchhhccCCCCCHHHHHHHHHHHHhcccccccccCcHHHHHHHHHHHHhhcCCcC
Confidence 489999999999999999999999999999999999999999999999862 2 123467888999999999753 2
Q ss_pred CC-eEEEe-CCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccC--
Q 011856 155 IE-MVRFV-NSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPF-- 230 (476)
Q Consensus 155 ~e-~v~~~-~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 230 (476)
.+ +++|+ |||+||++.|+|+||.++++.+||.+.++|||++.+++..++.......+ +.+ ..++..+|+
T Consensus 101 ~~~~~~f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~----~~~---~~~~~~~p~~~ 173 (425)
T PRK09264 101 LDYKVQFTGPTGTNAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGA----GVP---LNNVTRMPYDG 173 (425)
T ss_pred CCceEEEeCCCHHHHHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCC----CCC---CCCeEEeCCCC
Confidence 33 67674 89999999999999999999999999999999999999887754322111 110 113444554
Q ss_pred ------CCHHHHHHHHhcCC---CCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccchh
Q 011856 231 ------NDVSALENLFENNK---GEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQ 300 (476)
Q Consensus 231 ------~d~~~le~~l~~~~---~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~ 300 (476)
+|++++++++++++ +++++||+||+++++|.+.++++||++|+++|++||++||+||||+|| |+|.++++
T Consensus 174 ~~~~~~~~~~~l~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~~~ 253 (425)
T PRK09264 174 YFGGDVDTLAYLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTGTFFSF 253 (425)
T ss_pred ccccchhHHHHHHHHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCccccHHHHH
Confidence 47889999997532 469999999999999999999999999999999999999999999999 99999999
Q ss_pred hccCCCCchhhhhhhcCC-CCcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHH-HHhcCCCHHHHHHHHHH
Q 011856 301 EYFGVTPDLTTLGKIIGG-GLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTL-KRLKEPGTYEYLNKITG 378 (476)
Q Consensus 301 ~~~g~~pDi~t~sK~lg~-G~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal-~~~~~~~~~~~~~~~~~ 378 (476)
+++++.||++|+||++++ |+|+|++++++++ +.+. ...+.+||++||+++++++++| +.++++++.++++++++
T Consensus 254 ~~~~v~PDi~t~~K~l~~~G~pigav~~~~~i-~~~~---~~~~~~T~~gnp~~~aaa~a~l~~~~~~~~l~~~~~~~g~ 329 (425)
T PRK09264 254 ERAGITPDIVTLSKSISGYGLPMALVLIKPEL-DVWK---PGEHNGTFRGNNLAFVTATAALEEYWSDDAFEKEVKAKGE 329 (425)
T ss_pred hhcCCCCCEEEeccccCCCccceEEEEEchhh-hccC---CCccCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 999999999999999997 9999999999887 3443 3457789999999999999999 66666789999999999
Q ss_pred HHHHHHHHHhhhcCC-ceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCC--cceEE--eC
Q 011856 379 ELTQGIIDAGKKAGH-AICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF--EAGFT--SL 453 (476)
Q Consensus 379 ~l~~~L~~~~~~~~~-~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~--~~~~~--~~ 453 (476)
+++++|+++..+++. ..++++.|+|+++++.+ ......+.+.++++||++.+.+. ..+++ ++
T Consensus 330 ~l~~~l~~l~~~~~~~~~~vrg~Gl~~~i~l~~-------------~~~~~~l~~~~~~~Gv~~~~~~~~~~~lr~~p~l 396 (425)
T PRK09264 330 LVRERLEEIAAKYPGLGAEVRGRGMMQGIDFGD-------------GELAGKIAAEAFENGLIIETSGPEDEVVKLLPPL 396 (425)
T ss_pred HHHHHHHHHHHhCCCceecceecccEEEEEecC-------------hHHHHHHHHHHHHCCCEEeccCCCCCEEEEeCCC
Confidence 999999998777763 47889999999999853 23346788999999999987653 34444 67
Q ss_pred CCcHHHHHHHHHHHHHHHHHhh
Q 011856 454 AHSSDDIQHTITAAEKVKMRFL 475 (476)
Q Consensus 454 ~~t~e~i~~~~~~l~~~~~~~~ 475 (476)
.+|++++++++++|+++++++.
T Consensus 397 ~~t~~ei~~~~~~l~~~l~~~~ 418 (425)
T PRK09264 397 TIDEEELEEGLDILEEAVAEVL 418 (425)
T ss_pred CCCHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999987753
No 66
>PLN02624 ornithine-delta-aminotransferase
Probab=100.00 E-value=3.1e-60 Score=481.92 Aligned_cols=393 Identities=26% Similarity=0.384 Sum_probs=331.8
Q ss_pred hhHHHHHHHHhhhCCCCCCCccccccccCCCCeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHh
Q 011856 51 KKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKK 130 (476)
Q Consensus 51 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~ 130 (476)
.+++++.+..+++...+. .+.|+++.+++|+|+||.||++||||.+++++.++||+||+|++|+++|+++
T Consensus 37 ~~~~~~~~~~~~~~~~~~----------~~~p~~~~~a~G~~l~d~dG~~ylD~~sg~~~~~~Gh~~p~v~~ai~~ql~~ 106 (474)
T PLN02624 37 DSSAHLIELEEKYSAHNY----------HPIPVVFSRAKGSRIWDPEGKKYLDFLSAYSAVNQGHCHPKIIKALTEQAEK 106 (474)
T ss_pred cchHHHHHHHHHhhcccc----------CCCCceEEeeeeCEEEECCCCEEEEcccchhcccCCCCCHHHHHHHHHHHHh
Confidence 344677777766654322 1248999999999999999999999999999999999999999999999998
Q ss_pred cCCC--CCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhcc--------CCceEEEEeCCCCCCchhHHh
Q 011856 131 GTSF--GAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFT--------GRERIIKFEGCYHGHADPFLV 200 (476)
Q Consensus 131 ~~~~--~~~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~--------~~~~ii~~~~~yhg~~~~~~~ 200 (476)
.... .+.++...+|+++|++.+ +.++++|++||+||++.|+|+||.++ ++..||.+.++|||++.+++.
T Consensus 107 ~~~~~~~~~~~~~~~la~~L~~~~-~~~~~~f~~SGseA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s 185 (474)
T PLN02624 107 LTLSSRAFYNDKFPEFAEYLTSMF-GYDMVLPMNTGAEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAIS 185 (474)
T ss_pred cCCcccccCCHHHHHHHHHHHhhc-CCCeEEEeCChHHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhh
Confidence 5432 256788899999999988 57899999999999999999999863 345799999999999999998
Q ss_pred hcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhC
Q 011856 201 KAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENG 280 (476)
Q Consensus 201 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g 280 (476)
.++.......+ .+. ...+..+||+|++.++++++.+++++++||+||+++++|.+.|+++||++|+++|++||
T Consensus 186 ~~~~~~~~~~~--~~~-----~~~~~~~~~~d~~~l~~~l~~~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~g 258 (474)
T PLN02624 186 MSCDNEATRGF--GPL-----LPGHLKVDFGDLDALEKIFEEDGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHN 258 (474)
T ss_pred cCCCccccccC--CCC-----CCCceEeCCCCHHHHHHHHHhCCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcC
Confidence 77653222111 011 12356779999999999998766789999999999999999999999999999999999
Q ss_pred CEEEEeccccCc-cccccchhhccCCCCchhhhhhhcCCC-CcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHH
Q 011856 281 ALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGI 358 (476)
Q Consensus 281 ~llI~DEv~~g~-r~g~~~~~~~~g~~pDi~t~sK~lg~G-~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~ 358 (476)
++||+||+|+|| |+|.+++.+++++.||++++||++++| +|+|++++++++++.+. +..+++|+++||++++++.
T Consensus 259 illI~DEv~tG~GrtG~~~a~~~~~i~pDiv~lsK~lggG~~pigav~~~~~i~~~~~---~~~~~~T~~g~pl~~aaa~ 335 (474)
T PLN02624 259 VLMIADEIQTGLARTGKMLACDWEEVRPDVVILGKALGGGVIPVSAVLADKDVMLCIK---PGEHGSTFGGNPLASAVAM 335 (474)
T ss_pred CEEEEeccccCcCcCcchhhHHhcCCCCCEEEecccccCCCCcceeeeecHHHHhHhc---cCCcCCCCCCCHHHHHHHH
Confidence 999999999999 999888888899999999999999976 89999999999988876 3457889999999999999
Q ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcC-CceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHC
Q 011856 359 HTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAG-HAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEE 437 (476)
Q Consensus 359 aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 437 (476)
++|+.++++++.+++.+++++++++|+++..+++ .+.++++.|+|+++++..+. .+.....++++.|+++
T Consensus 336 aaLe~l~~~~l~~~~~~~~~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~l~~~~---------~~~~~a~~~~~~L~e~ 406 (474)
T PLN02624 336 AALQVVQDEKLAERSAKLGQELRDQLQKIQKQFPKLIKEVRGRGLLNAVVLNSPK---------LGPVSAYDVCLKLKER 406 (474)
T ss_pred HHHHHHHhchHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEeeEEEEEEEecCCC---------cChHHHHHHHHHHHhC
Confidence 9999998888999999999999999999877776 46678999999999885321 0123346788899999
Q ss_pred CeEeccCCCcceEE--eCCCcHHHHHHHHHHHHHHHHH
Q 011856 438 GVYFAPSQFEAGFT--SLAHSSDDIQHTITAAEKVKMR 473 (476)
Q Consensus 438 Gv~~~~~~~~~~~~--~~~~t~e~i~~~~~~l~~~~~~ 473 (476)
||++.+.+...+|+ ++.+|+++|++++++|++++..
T Consensus 407 GV~v~p~~~~~lR~~p~l~~t~e~id~~l~~L~~~l~~ 444 (474)
T PLN02624 407 GLLAKPTHDTIIRLAPPLSISEDELQECSKALSDVLEH 444 (474)
T ss_pred CeEEecCCCCEEEEECCccCCHHHHHHHHHHHHHHHHH
Confidence 99999887666777 5799999999999999998864
No 67
>PRK08297 L-lysine aminotransferase; Provisional
Probab=100.00 E-value=1.1e-60 Score=480.66 Aligned_cols=375 Identities=21% Similarity=0.284 Sum_probs=307.4
Q ss_pred eEEEeecCCEEEEc-CCCEEEecccChhhccCCCCcHHHHH--HHHHHHHhcC-----CCCCCCHHHHHHHHHHHhhC-C
Q 011856 83 IVFDSVKGSHMWDI-DGNEYIDYVGSWGPAIIGHADDQVLA--ALGETMKKGT-----SFGAPCLLENVLAEMVISAV-P 153 (476)
Q Consensus 83 ~~~~~~~G~~~~d~-dG~~~iD~~~~~~~~~lG~~~p~v~~--a~~~~l~~~~-----~~~~~~~~~~~la~~l~~~~-~ 153 (476)
+++.+++|+|+||. |||+||||.++++++++||+||+|.+ |+.+|+++.. ...+.++...+|+++|++.. |
T Consensus 28 ~~i~~a~G~~l~D~~dG~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~ql~~l~~~~~~~~~~~~~~~~~la~~l~~~~~p 107 (443)
T PRK08297 28 LDLERSQGSYLVDARTGRRYLDMFTFFASSALGMNHPALADDPEFRAELGRAALNKPSNSDVYTVEMARFVDTFARVLGD 107 (443)
T ss_pred eEEEeccCCEEEECCCCCEeeecccCHhhhcCCCCChHHhhHHHHHHHHHHhhhhccccCCcCCHHHHHHHHHHHhhcCC
Confidence 44899999999995 99999999999999999999999999 9999998632 22457788899999999987 4
Q ss_pred -CCCeEEEeCCHHHHHHHHHHHHHhcc------------CCceEEEEeCCCCCCchhHHhhcCCCCc-cCCCCCC--CCC
Q 011856 154 -SIEMVRFVNSGTEACMGVLRLARAFT------------GRERIIKFEGCYHGHADPFLVKAGSGVA-TLGLPDS--PGV 217 (476)
Q Consensus 154 -~~e~v~~~~sGseA~~~al~~ar~~~------------~~~~ii~~~~~yhg~~~~~~~~~g~~~~-~~~~~~~--~~~ 217 (476)
+.++|+|+|||+||++.|+|+||.++ ++.+||.+.++|||++++++..++.... ....+.. ..+
T Consensus 108 ~~~~~v~f~~SGsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~ 187 (443)
T PRK08297 108 PELPHLFFVDGGALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRI 187 (443)
T ss_pred CCCCEEEEeCchHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCcccc
Confidence 57899999999999999999998773 2578999999999999999988764221 1111110 001
Q ss_pred CCCC------C---CceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEecc
Q 011856 218 PKGA------T---YETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEV 288 (476)
Q Consensus 218 ~~~~------~---~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv 288 (476)
+... . .+...+++++++++++++.++++++++||+||+++++|.+.|+++||++|+++|++||++||+|||
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV 267 (443)
T PRK08297 188 DNPKLRFPLPGEDLEEVEALEAEALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEV 267 (443)
T ss_pred CCCCCCCCCcccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEech
Confidence 0000 0 001122334567788888877789999999999999999999999999999999999999999999
Q ss_pred ccCc-cccccchhhccCCCCchhhhhhhcCCCCcEEEEEecHHHHHhhcC--CCCccccCCCCCcHHHHHHHHHHHHHhc
Q 011856 289 MTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAP--AGPMYQAGTLSGNPLAMTAGIHTLKRLK 365 (476)
Q Consensus 289 ~~g~-r~g~~~~~~~~g~~pDi~t~sK~lg~G~~iG~~~~~~~i~~~l~~--~~~~~~~~t~~~~~~~~aaa~aal~~~~ 365 (476)
|||| |+|.+|+++++|+.||++|+||+++ +|++++.+++.+.... .....+++||++||++|++++++|+.++
T Consensus 268 ~tGfGRtG~~~a~~~~gv~PDiv~~gK~l~----~~a~l~~~~i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~ 343 (443)
T PRK08297 268 QTGVGLTGTAWAYQQLGVRPDIVAFGKKTQ----VCGIMAGRRVDEVEDNVFAVSSRINSTWGGNLVDMVRARRILEVIE 343 (443)
T ss_pred hhccCccchHHHHHhcCCCCCEEEeccccc----ccceecchHHHHhhhhhccCccccCCCCCccHHHHHHHHHHHHHHH
Confidence 9999 9999999999999999999999973 5666666665433211 1123588999999999999999999998
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhhhcCCce-EeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccC
Q 011856 366 EPGTYEYLNKITGELTQGIIDAGKKAGHAI-CGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPS 444 (476)
Q Consensus 366 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~ 444 (476)
++++.+++++++++++++|+++..+++.+. ++++.|+|++++|.+ ......+.+.|+++||++.+.
T Consensus 344 ~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~vrg~G~~~~i~~~~-------------~~~~~~~~~~l~~~Gvl~~~~ 410 (443)
T PRK08297 344 EDGLVENAARQGEYLLARLEELAAEFPAVVSNVRGRGLMCAFDLPT-------------TADRDEVIRRLWEEGVLVLPC 410 (443)
T ss_pred hcCHHHHHHHHHHHHHHHHHHHHHHCCCcceeeeccceEEEEEecC-------------HHHHHHHHHHHHHCCEEEecC
Confidence 899999999999999999999988888655 899999999999953 123467888999999999887
Q ss_pred CCcceEE--eCCCcHHHHHHHHHHHHHHHHHh
Q 011856 445 QFEAGFT--SLAHSSDDIQHTITAAEKVKMRF 474 (476)
Q Consensus 445 ~~~~~~~--~~~~t~e~i~~~~~~l~~~~~~~ 474 (476)
+...+++ ++.+|++|+|+++++|++++.++
T Consensus 411 ~~~~lr~~P~l~~t~~eid~~l~~l~~~l~~~ 442 (443)
T PRK08297 411 GERSIRFRPALTVTTEEIDAAIDALRRALPEV 442 (443)
T ss_pred CCCeEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 6555665 79999999999999999999875
No 68
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=100.00 E-value=1.1e-58 Score=464.29 Aligned_cols=379 Identities=25% Similarity=0.351 Sum_probs=319.1
Q ss_pred hHHHHHHHHhhhCCCCCCCccccccccCCCCeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhc
Q 011856 52 KSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKG 131 (476)
Q Consensus 52 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~ 131 (476)
+++++.++.+++..... .+.|+++.+++|+|+||.|||+||||.+++++.++||+||+|.+|+.+++++.
T Consensus 3 ~~~~~~~~~~~~~~~~~----------~~~p~~~~~~~G~~l~d~~G~~~lD~~~g~~~~~lGh~~p~v~~ai~~~~~~~ 72 (396)
T PRK04073 3 KSEKIIELTNHYGAHNY----------HPLPIVISEAEGVWVKDPEGNRYMDMLSAYSAVNQGHRHPKIIQALKDQADKV 72 (396)
T ss_pred hHHHHHHHHHHhccccc----------CCCCceEEeeeecEEEECCCCEEEEcCCCHHhccCCCCCHHHHHHHHHHHhhc
Confidence 45677777766654321 12489999999999999999999999999999999999999999999999985
Q ss_pred CCC--CCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhc--------cCCceEEEEeCCCCCCchhHHhh
Q 011856 132 TSF--GAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAF--------TGRERIIKFEGCYHGHADPFLVK 201 (476)
Q Consensus 132 ~~~--~~~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~--------~~~~~ii~~~~~yhg~~~~~~~~ 201 (476)
... ..+++...+|+++|++.. +.++++|++||+||++.|+++||.+ +++++||.++++|||++..++..
T Consensus 73 ~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~~~SGseA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~ 151 (396)
T PRK04073 73 TLTSRAFHSDQLGPWYEKVAKLT-GKDMVLPMNTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSL 151 (396)
T ss_pred cccccccCCHHHHHHHHHHHhcC-CCCeEEEcCChHHHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhh
Confidence 322 346778899999999987 4589999999999999999999987 57789999999999999988887
Q ss_pred cCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCC
Q 011856 202 AGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGA 281 (476)
Q Consensus 202 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~ 281 (476)
++.......+ .+. ...+..++++|++++++.++. ++++|++||+++++|.+.++++||++|+++|++||+
T Consensus 152 ~~~~~~~~~~--~~~-----~~~~~~~~~~d~~~l~~~i~~---~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~ 221 (396)
T PRK04073 152 SSEEEYKRGF--GPM-----LPGIKKIPYGDLEALKAAITP---NTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENV 221 (396)
T ss_pred cCCcccccCC--CCC-----CCCceEeCCCCHHHHHHhccc---CeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCC
Confidence 7643211110 011 123567889999999998863 689999999999999999999999999999999999
Q ss_pred EEEEeccccCc-cccccchhhccCCCCchhhhhhhcCCC-CcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHH
Q 011856 282 LLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIH 359 (476)
Q Consensus 282 llI~DEv~~g~-r~g~~~~~~~~g~~pDi~t~sK~lg~G-~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~a 359 (476)
+||+||+|+|| |+|.+++.+++++.||+++|||++++| +|+|++++++++++.+.. ..+..|+++||++++++++
T Consensus 222 lli~DEv~~g~g~~g~~~~~~~~~~~pdi~~~sK~lg~gg~~ig~~~~~~~i~~~~~~---~~~~~t~~~~~~~~aaa~a 298 (396)
T PRK04073 222 LFIADEIQTGLGRTGKLFACDWDNVTPDMYILGKALGGGVFPISCVAANRDILGVFTP---GSHGSTFGGNPLACAVSIA 298 (396)
T ss_pred EEEEecchhCCCcCcHHHHhhhcCCCCCEEEecccccCCCCcceEEEEcHHHHhhhcC---CCCCCCCCCCHHHHHHHHH
Confidence 99999999999 888877778889999999999999965 999999999999998863 3467899999999999999
Q ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCe
Q 011856 360 TLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGV 439 (476)
Q Consensus 360 al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv 439 (476)
+|+.++++++.++++++++++.+.|+++. .+.+..+++.|+|+++++.. ...++.+.|+++||
T Consensus 299 aL~~~~~~~l~~~~~~~~~~l~~~L~~l~--~~~i~~~~~~g~~~~~~~~~---------------~~~~~~~~l~~~Gv 361 (396)
T PRK04073 299 ALEVLEEEKLPERSLELGEYFKEQLKEID--NPMIKEVRGRGLFIGVELNE---------------PARPYCEALKEEGL 361 (396)
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHhhc--CCcccceecceEEEEEEecc---------------hHHHHHHHHHHCCe
Confidence 99998778899999999999999999863 34456778899999998742 12578888999999
Q ss_pred EeccCCCcceEEe--CCCcHHHHHHHHHHHHHHH
Q 011856 440 YFAPSQFEAGFTS--LAHSSDDIQHTITAAEKVK 471 (476)
Q Consensus 440 ~~~~~~~~~~~~~--~~~t~e~i~~~~~~l~~~~ 471 (476)
++.+.+...+|++ +.+|++++++++++|++++
T Consensus 362 ~~~~~~~~~iRi~p~l~~t~e~i~~~~~~l~~~l 395 (396)
T PRK04073 362 LCKETHETVIRFAPPLVITKEELDWAFEKIKAVL 395 (396)
T ss_pred EEecCCCCEEEEECCcccCHHHHHHHHHHHHHHh
Confidence 9987655567774 7899999999999999875
No 69
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=2.3e-58 Score=461.56 Aligned_cols=365 Identities=27% Similarity=0.391 Sum_probs=316.6
Q ss_pred CCeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcCCCC--CCCHHHHHHHHHHHhhCCCCCeE
Q 011856 81 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFG--APCLLENVLAEMVISAVPSIEMV 158 (476)
Q Consensus 81 ~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~~--~~~~~~~~la~~l~~~~~~~e~v 158 (476)
.|+++.+++|+|+||.|||+||||.++++++++||+||+|.+|+.+|++++...+ +.++...+++++|++.. +.+++
T Consensus 13 ~~~~~~~~~G~~~~d~dG~~~lD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~-~~~~v 91 (389)
T PRK01278 13 ADLAFERGEGVWLIDEDGERYLDFASGIAVNSLGHAHPHLVEALKEQAEKLWHVSNLYRIPEQERLAERLVENS-FADKV 91 (389)
T ss_pred CCceEEeeecCEEEECCCCEEEECCccHhhccCCCCCHHHHHHHHHHHHhcCccccccCChHHHHHHHHHHhhC-CCCEE
Confidence 4899999999999999999999999999999999999999999999998753322 45788899999999987 56899
Q ss_pred EEeCCHHHHHHHHHHHHHhc------cCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCC
Q 011856 159 RFVNSGTEACMGVLRLARAF------TGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFND 232 (476)
Q Consensus 159 ~~~~sGseA~~~al~~ar~~------~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 232 (476)
+|++||+||++.|++++|.+ +++++||.++++|||++..++..++.......+. ....++..++++|
T Consensus 92 ~~~~sGseA~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~d 164 (389)
T PRK01278 92 FFTNSGAEAVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFG-------PLVPGFDQVPFGD 164 (389)
T ss_pred EEcCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCC-------CCCCCceEeCCCC
Confidence 99999999999999999887 5677999999999999999988776533221110 0112356678899
Q ss_pred HHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccchhhccCCCCchhh
Q 011856 233 VSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTT 311 (476)
Q Consensus 233 ~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pDi~t 311 (476)
++++++.++. ++++|++||+++++|.+.++++|+++|+++|++||++||+||+|+|| |+|.+++++++++.||++|
T Consensus 165 ~~~l~~~l~~---~~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~t 241 (389)
T PRK01278 165 IEALKAAITP---NTAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLFAHEWAGVTPDIMA 241 (389)
T ss_pred HHHHHHhhCC---CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCcceeecccCCCCCEEE
Confidence 9999999963 79999999999999988899999999999999999999999999999 8888777788899999999
Q ss_pred hhhhcCCCCcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhc
Q 011856 312 LGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKA 391 (476)
Q Consensus 312 ~sK~lg~G~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 391 (476)
|||++++|+|+||+++++++++.+. ...+..|+++||+++++++++|+.++++++.+++++++++++++|+++...+
T Consensus 242 ~sK~l~~G~~ig~~~~~~~~~~~~~---~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~l~~l~~~~ 318 (389)
T PRK01278 242 VAKGIGGGFPLGACLATEEAAKGMT---PGTHGSTYGGNPLAMAVGNAVLDVILAPGFLDNVQRMGLYLKQKLEGLVDRF 318 (389)
T ss_pred EehhccCCcceEEEEEcHHHHhccC---CCCCCCCCCccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 9999999999999999999998876 3457789999999999999999998777889999999999999999987666
Q ss_pred C-CceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCCcceEEe--CCCcHHHHHHHHHHHH
Q 011856 392 G-HAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFTS--LAHSSDDIQHTITAAE 468 (476)
Q Consensus 392 ~-~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~~--~~~t~e~i~~~~~~l~ 468 (476)
+ ++.++++.|.++++++..+ ..++.+.|+++||++.|++.+.+|++ +.++++++++++++|+
T Consensus 319 ~~~~~~v~g~G~~~~i~~~~~---------------~~~~~~~l~~~GV~~~p~~~~~lR~~p~~~~~~~~i~~~l~~l~ 383 (389)
T PRK01278 319 PDVIEEVRGKGLLLGLKCVVP---------------NRDLVQALRDEGLLTVGAGDNVVRLLPPLIITEEEIDEALERLE 383 (389)
T ss_pred CCceeeEecccEEEEEEEecC---------------HHHHHHHHHHCCeEEeecCCCEEEEeCCcccCHHHHHHHHHHHH
Confidence 6 6778899999999887421 25788999999999999876777874 6799999999999999
Q ss_pred HHHHHh
Q 011856 469 KVKMRF 474 (476)
Q Consensus 469 ~~~~~~ 474 (476)
++++++
T Consensus 384 ~~l~~~ 389 (389)
T PRK01278 384 RAAESL 389 (389)
T ss_pred HHHHhC
Confidence 998753
No 70
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=100.00 E-value=1.5e-57 Score=456.93 Aligned_cols=370 Identities=28% Similarity=0.399 Sum_probs=317.9
Q ss_pred CCeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcCCCC--CCCHHHHHHHHHHHhhCCCCCeE
Q 011856 81 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFG--APCLLENVLAEMVISAVPSIEMV 158 (476)
Q Consensus 81 ~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~~--~~~~~~~~la~~l~~~~~~~e~v 158 (476)
.|+++.+++|+|+||.||++||||.+++++++|||+||+|.+++.+++++....+ +.++...+|+++|++.. +.+++
T Consensus 22 ~~~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~ 100 (403)
T PRK05093 22 AEFIPVRGEGSRVWDQQGKEYIDFAGGIAVTALGHCHPALVKALKEQGEKLWHISNVFTNEPALRLAKKLIDAT-FAERV 100 (403)
T ss_pred CCeeEEEeecCEEEeCCCCEEEEcCcCHHhccCCCCCHHHHHHHHHHHHhcCcccCccCCHHHHHHHHHHHhhC-CCCEE
Confidence 4899999999999999999999999999999999999999999999998743222 35667789999999987 56899
Q ss_pred EEeCCHHHHHHHHHHHHHhcc------CCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCC
Q 011856 159 RFVNSGTEACMGVLRLARAFT------GRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFND 232 (476)
Q Consensus 159 ~~~~sGseA~~~al~~ar~~~------~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 232 (476)
+|++||+|||+.|++++|.++ ++++||.++++|||++...+..++..... .++.. ...++..+++||
T Consensus 101 ~~~~sGseA~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~------~~~~~-~~~~~~~~~~~d 173 (403)
T PRK05093 101 FFANSGAEANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYS------DGFGP-KPADITHVPFND 173 (403)
T ss_pred EEeCchHHHHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhh------hcCCC-CCCCcEEeCCCC
Confidence 999999999999999999884 67899999999999998777766542111 11111 122477889999
Q ss_pred HHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccchhhccCCCCchhh
Q 011856 233 VSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTT 311 (476)
Q Consensus 233 ~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pDi~t 311 (476)
++.+++.+.+ ++++|++||+++++|.+.++++|+++|+++|++||+++|+||+|+|| ++|.+++.+++++.||+.+
T Consensus 174 ~~~l~~~l~~---~~aaiiiep~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~s 250 (403)
T PRK05093 174 LAAVKAVIDD---HTCAVVVEPIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDLFAYMHYGVTPDILT 250 (403)
T ss_pred HHHHHHHhcC---CeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCCCCEEE
Confidence 9999999863 69999999999999999999999999999999999999999999999 8887777778899999999
Q ss_pred hhhhcCCCCcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhc
Q 011856 312 LGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKA 391 (476)
Q Consensus 312 ~sK~lg~G~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 391 (476)
|||++++|+|+||+++++++++.+.. ..+..|++++|+.|+++.++|+.+.++++.++++++++++++.|+++..++
T Consensus 251 ~sK~l~~G~rig~vv~~~~i~~~l~~---~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 327 (403)
T PRK05093 251 SAKALGGGFPIGAMLTTAEIASHFKV---GTHGSTYGGNPLACAVAEAVFDIINTPEVLEGVKARRQRFVDGLQKINQKY 327 (403)
T ss_pred ecccccCCcceEEEEEcHHHHhhcCC---CCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhC
Confidence 99999999999999999999998863 346678899999999999999998778899999999999999999987667
Q ss_pred CCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCCcceEE--eCCCcHHHHHHHHHHHHH
Q 011856 392 GHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAEK 469 (476)
Q Consensus 392 ~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~--~~~~t~e~i~~~~~~l~~ 469 (476)
+....+++.|.++++++.... .....+++..|+++||++.+.+.+.+|+ ++.+++++|++++++|++
T Consensus 328 ~~~~~~~~~G~~~~~~l~~~~-----------~~~~~~~~~~l~~~Gv~v~~~g~~~lRl~~~~~~~~~~i~~~~~~l~~ 396 (403)
T PRK05093 328 GVFSEIRGMGLLIGAELKPQY-----------KGRARDFLNAAAEEGVMVLVAGPDVLRFAPSLVIEEADIDEGLARFEK 396 (403)
T ss_pred CCeEeEeeCceEEEEEecCcc-----------hhHHHHHHHHHHHCCeEEecCCCCEEEEeCCCCCCHHHHHHHHHHHHH
Confidence 777788899999999985310 1134678899999999999876667777 688899999999999999
Q ss_pred HHHHhh
Q 011856 470 VKMRFL 475 (476)
Q Consensus 470 ~~~~~~ 475 (476)
++.++.
T Consensus 397 ~l~~~~ 402 (403)
T PRK05093 397 AVAKVV 402 (403)
T ss_pred HHHHhc
Confidence 997753
No 71
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=100.00 E-value=3.9e-58 Score=461.99 Aligned_cols=372 Identities=21% Similarity=0.284 Sum_probs=300.1
Q ss_pred CeE--EEeecCCEEEEc-CCCEEEecccChhhccCCCCcHHHH--HHHHHHHHhcC----C-CCCCCHHHHHHHHHHHhh
Q 011856 82 PIV--FDSVKGSHMWDI-DGNEYIDYVGSWGPAIIGHADDQVL--AALGETMKKGT----S-FGAPCLLENVLAEMVISA 151 (476)
Q Consensus 82 p~~--~~~~~G~~~~d~-dG~~~iD~~~~~~~~~lG~~~p~v~--~a~~~~l~~~~----~-~~~~~~~~~~la~~l~~~ 151 (476)
|++ +.+++|+|+||. |||+||||.+++++.++||+||+|. +|+.+|++++. . .....+...+++++|++.
T Consensus 18 p~~~~~~~a~G~~l~D~~dG~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~q~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 97 (431)
T TIGR03251 18 DLVLDLDRSRGSVLVDARDGRRYLDMFSFFASMALGMNHPALVDDLAFRARLGAAAVNKPSNSDVYTVAMARFVDTFARV 97 (431)
T ss_pred ceeeEEEeccCCEEEECCCCCChhhcccChhhcCCCCCChhhhHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHHHHHh
Confidence 555 599999999996 9999999999999999999999999 99999998752 1 134567778899999888
Q ss_pred C-C-CCCeEEEeCCHHHHHHHHHHHHHhccC------------CceEEEEeCCCCCCchhHHhhcCCCCccCC-CCCCCC
Q 011856 152 V-P-SIEMVRFVNSGTEACMGVLRLARAFTG------------RERIIKFEGCYHGHADPFLVKAGSGVATLG-LPDSPG 216 (476)
Q Consensus 152 ~-~-~~e~v~~~~sGseA~~~al~~ar~~~~------------~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~-~~~~~~ 216 (476)
. + +.++++|+|||+||++.|+|+||.+++ +.+||.++++|||++++++..++....... .|....
T Consensus 98 ~~~~~~~~v~f~~sGsEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~ 177 (431)
T TIGR03251 98 LGDPALPHLFFIEGGALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDW 177 (431)
T ss_pred cCCCCcCEEEEeCCcHHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCC
Confidence 5 3 578999999999999999999998862 468999999999999999988775322111 111100
Q ss_pred --C--CCC---CC----CceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 011856 217 --V--PKG---AT----YETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 285 (476)
Q Consensus 217 --~--~~~---~~----~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~ 285 (476)
+ +.. .. .....+.+++++++++.+.++++++++||+||+++++|.+.++++||++|+++|++||++||+
T Consensus 178 ~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~ 257 (431)
T TIGR03251 178 PRIDNPKLTFPLDAPNLDQVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIF 257 (431)
T ss_pred ccCCCCcccCCccccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEE
Confidence 0 000 00 001111234567778888777789999999999999999999999999999999999999999
Q ss_pred eccccCc-cccccchhhccCCCCchhhhhhhcCCCCcEEEEEecHHHHHhhc--CCCCccccCCCCCcHHHHHHHHHHHH
Q 011856 286 DEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVA--PAGPMYQAGTLSGNPLAMTAGIHTLK 362 (476)
Q Consensus 286 DEv~~g~-r~g~~~~~~~~g~~pDi~t~sK~lg~G~~iG~~~~~~~i~~~l~--~~~~~~~~~t~~~~~~~~aaa~aal~ 362 (476)
||||+|| |+|.+|+++++|+.||++|+||++ ++++++..+++.+... ......+.+||++||++|++++++|+
T Consensus 258 DEV~tG~GrtG~~~a~~~~gv~PDi~~~gK~~----~~~g~~~~~~i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~ 333 (431)
T TIGR03251 258 DEVQTGVGLTGTAWAYQQLGVQPDIVAFGKKT----QVCGIMAGRRVDEVADNVFAVPSRLNSTWGGNLVDMVRATRILE 333 (431)
T ss_pred ecchhccCccchHHHHHhcCCCCCEEEecccC----ccceEEecchHHHhhhhcccCccccCCCCCCCHHHHHHHHHHHH
Confidence 9999999 999999999999999999999986 4556655555433221 01123478899999999999999999
Q ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHhhhcC-CceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEe
Q 011856 363 RLKEPGTYEYLNKITGELTQGIIDAGKKAG-HAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYF 441 (476)
Q Consensus 363 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~ 441 (476)
.++++++.+++++++++++++|+++..+++ ++.++++.|+|+++++.+ ......+.+.|+++||++
T Consensus 334 ~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~~~~-------------~~~~~~~~~~l~~~Gvl~ 400 (431)
T TIGR03251 334 IIEEERLVDNARVQGAHLLARLHELAAEFPHLVSNPRGRGLMCAFDLPS-------------TADRDEVIRQLYREGVLL 400 (431)
T ss_pred HHHhcCHHHHHHHHHHHHHHHHHHHHHhCccceecccccceeEEEEeCC-------------HHHHHHHHHHHHhCCeEE
Confidence 998888999999999999999999877787 888999999999999842 123457889999999999
Q ss_pred ccCCCcceEE--eCCCcHHHHHHHHHHHHHH
Q 011856 442 APSQFEAGFT--SLAHSSDDIQHTITAAEKV 470 (476)
Q Consensus 442 ~~~~~~~~~~--~~~~t~e~i~~~~~~l~~~ 470 (476)
.+.+...+++ ++.+|++|||+++++|+++
T Consensus 401 ~~~g~~~lr~~P~l~~t~~eid~~l~~l~~~ 431 (431)
T TIGR03251 401 LGCGERSIRFRPPLTVTREEIDAAIDAIRRV 431 (431)
T ss_pred ecCCCCeEEEECCccCCHHHHHHHHHHHHhC
Confidence 8876555664 7899999999999999863
No 72
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=100.00 E-value=4.9e-59 Score=454.38 Aligned_cols=316 Identities=36% Similarity=0.584 Sum_probs=276.8
Q ss_pred EEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcCC---CCCCCHHHHHHHHHHHhhCC-CCCeEE
Q 011856 84 VFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTS---FGAPCLLENVLAEMVISAVP-SIEMVR 159 (476)
Q Consensus 84 ~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~---~~~~~~~~~~la~~l~~~~~-~~e~v~ 159 (476)
++++++|+|+||.|||+||||.++++++++||+||+|.+++.+++.++.. ..+.++...+|+++|.+.+| +.++++
T Consensus 1 ~i~~a~G~~l~d~dG~~~lD~~~~~~~~~lGh~~p~i~~ai~~~~~~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~v~ 80 (339)
T PF00202_consen 1 FIERAEGAYLWDVDGREYLDFMSGYGSVNLGHNHPEIAEAIAEQANKLNYVSFSGFTHPEAAELAEKLAELFPGGLDRVF 80 (339)
T ss_dssp EEEEEEBTEEEETTSEEEEESSHHHHTTTT-BT-HHHHHHHHHHHHHCSSCSTTTSEEHHHHHHHHHHHHHSSTTEEEEE
T ss_pred CeEEeecCEEEECCCCEEEECCCCccceecCCCccccchhHHHHhhhcccccccceeccchhhhhhhhhhccccccceee
Confidence 57899999999999999999999999999999999999999999998644 34678889999999999998 688999
Q ss_pred EeCCHHHHHHHHHHHHH------hccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCH
Q 011856 160 FVNSGTEACMGVLRLAR------AFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDV 233 (476)
Q Consensus 160 ~~~sGseA~~~al~~ar------~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 233 (476)
|++||+||++.|+|+|| ..+++.+|+.+.++|||++.+++..++........ ......+..+|++++
T Consensus 81 f~~sGseAve~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~-------~~~~~~~~~~p~~~~ 153 (339)
T PF00202_consen 81 FANSGSEAVEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGF-------GPLYPGVVFVPFPDP 153 (339)
T ss_dssp EESSHHHHHHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTT-------CSSSTTEEEEETTCH
T ss_pred eccCchHHHHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCccccccc-------cccccccccccCCcc
Confidence 99999999999999999 78999999999999999999999887664333211 111223577888876
Q ss_pred HH----------HHHHHh-cCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccchhh
Q 011856 234 SA----------LENLFE-NNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQE 301 (476)
Q Consensus 234 ~~----------le~~l~-~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~ 301 (476)
.. +++.+. ...+++++||+||+++++|.+.++++||++|+++|++||++||+|||+||| |+|.+|+++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~~~a~~ 233 (339)
T PF00202_consen 154 AADEEEQACLNALEELIAALNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGKFFASE 233 (339)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSSSSGHH
T ss_pred chhhhHHHHHHHHHHHHHhhcCCcEEEEEEeccccccCccccccchhhehcccccccccceecccccccccccCCcccee
Confidence 66 444332 234689999999999999999999999999999999999999999999999 999999999
Q ss_pred ccCCCCchhhhhhhcCCCCcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Q 011856 302 YFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELT 381 (476)
Q Consensus 302 ~~g~~pDi~t~sK~lg~G~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~ 381 (476)
++|+.||++|+||++++|+|+|++++++++++.+.. ..+.+||++||++|++++++|+.++++++.+++++++++|+
T Consensus 234 ~~gv~PDiv~~gK~l~gG~p~sav~~~~~i~~~~~~---~~~~~T~~g~p~~~aaa~~~l~~~~~~~~~~~~~~~g~~l~ 310 (339)
T PF00202_consen 234 HYGVDPDIVTFGKGLGGGLPISAVLGSEEIMEAFQP---GSHGSTFGGNPLSCAAALATLEILEEEDLLERVRELGERLR 310 (339)
T ss_dssp HHTSSSSEEEEEGGGGTTSSEEEEEEEHHHHTTSCT---TSSTCTTTT-HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred cccccCcccccccchhhhhhcccccccchhhccccc---cccccccccchHhhhhhhhHHHhhccHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998863 33889999999999999999999999999999999999999
Q ss_pred HHHHHHhhhcCCceEeeeeceeEEEEEe
Q 011856 382 QGIIDAGKKAGHAICGGYISGMFGFFFT 409 (476)
Q Consensus 382 ~~L~~~~~~~~~~~~v~~~g~~~~i~~~ 409 (476)
++|+++..+++.+.++++.|+|++++|.
T Consensus 311 ~~L~~l~~~~~~i~~vrg~Gl~~~ie~~ 338 (339)
T PF00202_consen 311 EGLRELAARYPLIGEVRGIGLMIGIELV 338 (339)
T ss_dssp HHHHHHHHHTTTEEEEEEETTEEEEEES
T ss_pred HHHHHHHHhCCCeEEEeeeCeEEEEEEE
Confidence 9999998888999999999999999985
No 73
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=100.00 E-value=8.5e-58 Score=458.58 Aligned_cols=377 Identities=22% Similarity=0.296 Sum_probs=312.8
Q ss_pred CeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcCC--C-CCCCHHHHHHHHHHHhhCC-CCCe
Q 011856 82 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTS--F-GAPCLLENVLAEMVISAVP-SIEM 157 (476)
Q Consensus 82 p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~--~-~~~~~~~~~la~~l~~~~~-~~e~ 157 (476)
++.+.+++|+|+||.|||+||||.+++++.++||+||+|.+|+++++++... + +.+++...+++++|++.+| +.++
T Consensus 28 ~~~~~~a~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~ 107 (427)
T TIGR00508 28 VYPVESADGVELTLDDGRRLIDGMSSWWAAIHGYNHPRLNAAAQKQIDKMSHVMFGGFTHKPAIELCQKLVKMTPNALDC 107 (427)
T ss_pred CceEEeeeeeEEEeCCCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHhhCCCCCCE
Confidence 5678999999999999999999999999999999999999999999998532 2 3467888999999999987 4689
Q ss_pred EEEeCCHHHHHHHHHHHHHhcc------CCceEEEEeCCCCCCchhHHhhcCCCC-ccCCC-CCCCCCCCCCCC-ceeec
Q 011856 158 VRFVNSGTEACMGVLRLARAFT------GRERIIKFEGCYHGHADPFLVKAGSGV-ATLGL-PDSPGVPKGATY-ETLTA 228 (476)
Q Consensus 158 v~~~~sGseA~~~al~~ar~~~------~~~~ii~~~~~yhg~~~~~~~~~g~~~-~~~~~-~~~~~~~~~~~~-~~~~~ 228 (476)
++|++||+||++.|+|+||.++ ++.+||.++++|||++..++..++... ....+ +..++....... ..+..
T Consensus 108 v~f~~sGseA~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 187 (427)
T TIGR00508 108 VFLADSGSVAVEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAPQNRFDE 187 (427)
T ss_pred EEEeCCcHHHHHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCCCCccccc
Confidence 9999999999999999999874 578999999999999999888766421 11000 101111000000 01111
Q ss_pred cC--CCHHHHHHHHhcCCCCeEEEEEccc-CCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccchhhccC
Q 011856 229 PF--NDVSALENLFENNKGEIAAIILEPV-VGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFG 304 (476)
Q Consensus 229 ~~--~d~~~le~~l~~~~~~~a~vi~ep~-~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g 304 (476)
++ +|+++++++++++++++++||+||+ ++++|.+.++++||++|+++|++||++||+||||+|| |+|.+|+.++++
T Consensus 188 ~~~~~~~~~l~~~l~~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G~~~~~~~~~ 267 (427)
T TIGR00508 188 EWNEEAITPLAKLMELHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTGKLFACEHAG 267 (427)
T ss_pred hhHHHHHHHHHHHHHhcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCccchhhhcC
Confidence 22 3678889999876678999999997 8889999999999999999999999999999999999 999998999999
Q ss_pred CCCchhhhhhhcCCCC-cEEEEEecHHHHHhhcCC--CCccccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Q 011856 305 VTPDLTTLGKIIGGGL-PVGAYGGRRDIMEMVAPA--GPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELT 381 (476)
Q Consensus 305 ~~pDi~t~sK~lg~G~-~iG~~~~~~~i~~~l~~~--~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~ 381 (476)
+.||++|+||+++||+ |++++++++++++.+... ....+.+||++||+++++++++|+.++++++.+++++++++|+
T Consensus 268 v~pDi~~~gK~l~gG~~p~~a~~~~~~~~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~ 347 (427)
T TIGR00508 268 VVPDILCVGKALTGGYMTLSATVTTDKVAQTISSGEAGCFMHGPTFMGNPLACAVAEASLAILLEGEWQKQVSAIENQLK 347 (427)
T ss_pred CCCCEEEechhhhcCcccceEEEEcHHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 9999999999999995 999999999999988642 1345778999999999999999999988899999999999999
Q ss_pred HHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCCcceEE--eCCCcHHH
Q 011856 382 QGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDD 459 (476)
Q Consensus 382 ~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~--~~~~t~e~ 459 (476)
++|+++.. ++.+.++++.|+|+++++.++. ....+...|+++||++.+.+ +.+++ ++.+|++|
T Consensus 348 ~~L~~l~~-~~~i~~vrg~G~~~~i~~~~~~-------------~~~~~~~~l~~~Gv~~~~~~-~~l~~~ppl~~t~~~ 412 (427)
T TIGR00508 348 RELSPLRK-NPVVKDVRVLGAIGVVEMYKPV-------------NVEELQKKFVEQGVWIRPFG-KLIYVMPPYIITTEQ 412 (427)
T ss_pred HHHHHhhc-CCCEEeEeccccEEEEEECCcc-------------CHHHHHHHHHHCCeEEEecC-CEEEEECCCCCCHHH
Confidence 99999753 5556789999999999995321 12568889999999998764 34555 67899999
Q ss_pred HHHHHHHHHHHHHH
Q 011856 460 IQHTITAAEKVKMR 473 (476)
Q Consensus 460 i~~~~~~l~~~~~~ 473 (476)
||+++++|++++++
T Consensus 413 id~~~~~l~~~l~~ 426 (427)
T TIGR00508 413 LQKLTAALIEALHE 426 (427)
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999999864
No 74
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=100.00 E-value=3.1e-56 Score=449.41 Aligned_cols=401 Identities=27% Similarity=0.414 Sum_probs=328.4
Q ss_pred HHHHHHHHhhhCCCCCCCccccccccCCCCeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcC
Q 011856 53 SEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT 132 (476)
Q Consensus 53 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~ 132 (476)
.++++++++++.+.|+..+ +|+++.+++|+|+||+||++||||.+++++.++||+||+|.+++.+++++..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~---------~p~~~~~~~G~~l~d~dG~~~lD~~~g~~~~~lGh~~~~i~~a~~~~~~~~~ 74 (425)
T PRK08088 4 NKSLMQRRSAAVPRGVGQI---------HPIFADRAENCRVWDVEGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLS 74 (425)
T ss_pred HHHHHHHHHHhhccccCCC---------CCceEEeeeeCEEEeCCCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHhhCC
Confidence 4567777777777765432 3899999999999999999999999999999999999999999999999853
Q ss_pred CCC---CCCHHHHHHHHHHHhhCC-C-CCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCC-
Q 011856 133 SFG---APCLLENVLAEMVISAVP-S-IEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGV- 206 (476)
Q Consensus 133 ~~~---~~~~~~~~la~~l~~~~~-~-~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~- 206 (476)
+.. ..++...+|++++++..| + .++++|++||+||++.|+++||.++++.+||.++++|||++..++..++...
T Consensus 75 ~~~~~~~~~~~~~~la~~l~~~~~~~~~~~~~f~~sGsea~e~Alklar~~~~r~~iv~~~~~yHG~~~~~~~~~~~~~~ 154 (425)
T PRK08088 75 HTCFQVLAYEPYLELCEKMNQKVPGDFAKKTLLVTTGSEAVENAVKIARAATKRSGVIAFTGAYHGRTHYTLALTGKVNP 154 (425)
T ss_pred CccccccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHHhCCCeEEEECCccCCccHHHHHhhCCCCc
Confidence 221 236677899999999886 3 3699999999999999999999999999999999999999999888765311
Q ss_pred ccCCCC-CCCCCCCCCCCceeeccCCC------HHHHHHHHh--cCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHH
Q 011856 207 ATLGLP-DSPGVPKGATYETLTAPFND------VSALENLFE--NNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITK 277 (476)
Q Consensus 207 ~~~~~~-~~~~~~~~~~~~~~~~~~~d------~~~le~~l~--~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~ 277 (476)
....+. ...++.. ..+..++++ ++.|+++++ .+++++++||+||+++++|.+.++++|+++|+++|+
T Consensus 155 ~~~~~~~~~~~~~~----~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~ 230 (425)
T PRK08088 155 YSAGMGLMPGHVYR----ALYPCPLHGVSEDDAIASIERIFKNDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCD 230 (425)
T ss_pred cccCCCCCCCCcEE----cCCCccccCccHHHHHHHHHHHHHhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHH
Confidence 111110 0011100 001111221 667888886 335689999999999999999999999999999999
Q ss_pred HhCCEEEEeccccCc-cccccchhhccCCCCchhhhhhhcCCCCcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHH
Q 011856 278 ENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTA 356 (476)
Q Consensus 278 ~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pDi~t~sK~lg~G~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aa 356 (476)
+||+++|+||+|+|| ++|.+++++++++.||+.+|||++++|+|+||+++++++++.+.. ..+.+|+++||+.+++
T Consensus 231 ~~~~~lI~Dev~~g~g~~g~~~~~~~~~~~pdi~s~sK~l~~G~rig~v~~~~~~~~~~~~---~~~~~t~~~~~~~~~a 307 (425)
T PRK08088 231 EHGIMLIADEVQTGAGRTGTLFAMEQMGVAADLTTFAKSIAGGFPLAGVTGRAEVMDAIAP---GGLGGTYAGNPIACAA 307 (425)
T ss_pred HcCCEEEEeccccCCCcCcchhHHhhcCCCCCEEEEeccccCCCcceeeEecHHHHhhcCC---CCCCCCCCcCHHHHHH
Confidence 999999999999999 888777778889999999999999999999999999999998863 3467799999999999
Q ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHH
Q 011856 357 GIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLE 436 (476)
Q Consensus 357 a~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 436 (476)
+.++|+.++.+++.+++++.++++++.|.++..+++.+..+++.|+|+|+++.++.. ...|+......+.+.|++
T Consensus 308 ~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~g~G~~~~l~l~~~~~-----~~~p~~~~~~~l~~~~~~ 382 (425)
T PRK08088 308 ALAVLKVFEQENLLQKANALGEKLKDGLLAIAEKHPEIGDVRGLGAMIAIELFEDGD-----HSKPNAKLTAQIVARARD 382 (425)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeccceEEEEEEecCCC-----CCCCCHHHHHHHHHHHHh
Confidence 999999988789999999999999999999988888778899999999999964321 122344556789999999
Q ss_pred CCeEeccCCC--cceEE--eCCCcHHHHHHHHHHHHHHHHHh
Q 011856 437 EGVYFAPSQF--EAGFT--SLAHSSDDIQHTITAAEKVKMRF 474 (476)
Q Consensus 437 ~Gv~~~~~~~--~~~~~--~~~~t~e~i~~~~~~l~~~~~~~ 474 (476)
+||++.+.+. +.+++ ++.+++++|++++++|++++.++
T Consensus 383 ~Gv~~~~~~~~~~~iRl~~~~~~t~~ei~~~i~~l~~~l~~~ 424 (425)
T PRK08088 383 KGLILLSCGPYYNVLRILVPLTIEDAQIRQGLEIIAQCFDEA 424 (425)
T ss_pred CCCEEecCCCCCCEEEEECCCCcCHHHHHHHHHHHHHHHHhh
Confidence 9998876542 45565 45689999999999999998754
No 75
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=100.00 E-value=2.8e-56 Score=469.65 Aligned_cols=412 Identities=19% Similarity=0.250 Sum_probs=321.0
Q ss_pred CChhHHHHHHHHhhhCCCCCCCccccccccCC-CCeEEEeecCC----EEEEcCCC----EEEecccChhhccCC-CCcH
Q 011856 49 TLKKSEEAFNVAKELMPGGVNSPVRAFKSVGG-QPIVFDSVKGS----HMWDIDGN----EYIDYVGSWGPAIIG-HADD 118 (476)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~p~~~~~~~G~----~~~d~dG~----~~iD~~~~~~~~~lG-~~~p 118 (476)
...+++++.+++++++.... .....+.. .|.+|++++|. |++|.||+ +|||+.++|++.++| |+||
T Consensus 310 r~~~~~~~~~~a~~~iw~Pf----tq~~~~~~~~~~vi~~a~G~~~~~~~~d~~G~~~~~~ylD~~sg~w~~~lG~h~~p 385 (817)
T PLN02974 310 RLQRLQSMPKEAGEVLWWPF----TQHALVPRDSVTVIDSRCGEDFSVYKPKTNSTCSIVQQFDACASWWTQGPDPTLQP 385 (817)
T ss_pred HhHHHHHHHHHHhhhccCCc----ccccccCCCCceEEEeeecCceeEEEECCCCCcccceEEEcchhHHHhCCCcCCCH
Confidence 35677888999998875422 22222221 37899999998 99999998 999999999999999 5899
Q ss_pred HHHHHHHHHHHhcCCC---CCCCHHHHHHHHHHHhhCC-C-CCeEEEeCCHHHHHHHHHHHHH-hcc-------------
Q 011856 119 QVLAALGETMKKGTSF---GAPCLLENVLAEMVISAVP-S-IEMVRFVNSGTEACMGVLRLAR-AFT------------- 179 (476)
Q Consensus 119 ~v~~a~~~~l~~~~~~---~~~~~~~~~la~~l~~~~~-~-~e~v~~~~sGseA~~~al~~ar-~~~------------- 179 (476)
+|.+|+.+|+.+..+. ++.++...+|+++|.+..+ + .++|+|++||+||+|.|||+|| .+.
T Consensus 386 ~I~~Ai~~Qa~rl~hv~~~~~~hepa~~LAe~L~~~~~~~~l~rVffs~sGSeAvE~AlKmA~r~y~~~~G~~~~~~~~~ 465 (817)
T PLN02974 386 ELARAVAYAAGRYGHVMFPENVHEPALRAAELLLGGPGKGWASRVFFSDNGSTAIEVALKMAFRKFIVDHGFLENSGNEK 465 (817)
T ss_pred HHHHHHHHHHhhCCccccCccCCHHHHHHHHHHHhccCCCCCCEEEECCchHHHHHHHHHHHHHHHHHhcCCCccccccc
Confidence 9999999999985432 3578999999999999654 3 6899999999999999999995 352
Q ss_pred -----CCceEEEEeCCCCCCchhHHhhcCCCCccCCC--CC----CCCC--CCCC-CC--ceeeccCC------------
Q 011856 180 -----GRERIIKFEGCYHGHADPFLVKAGSGVATLGL--PD----SPGV--PKGA-TY--ETLTAPFN------------ 231 (476)
Q Consensus 180 -----~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~--~~----~~~~--~~~~-~~--~~~~~~~~------------ 231 (476)
++.+||.++++|||.+.+++..++.......+ |. ...+ |... .. ....+|++
T Consensus 466 ~~~~~~r~kIIa~~gsYHG~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 545 (817)
T PLN02974 466 RGGDLIELKVLALDGSYHGDTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTVGMRNGRWNISLPEGFSSGLEGEETTW 545 (817)
T ss_pred ccccCCCCEEEEECCCcCCCCHHHHhhCCchhhhcccccccccCCCcccCCCccccccccccccCCcccccccccccccc
Confidence 36789999999999999999988643221110 10 0000 0000 00 00011111
Q ss_pred -------------------CHHHHHHHHhc-----CCCCeEEEEEccc-CCCCCcccCCHHHHHHHHHHHHHhCCEEEEe
Q 011856 232 -------------------DVSALENLFEN-----NKGEIAAIILEPV-VGNSGFIAPKPDFLNAIRRITKENGALLIFD 286 (476)
Q Consensus 232 -------------------d~~~le~~l~~-----~~~~~a~vi~ep~-~~~~G~i~~~~~~l~~l~~l~~~~g~llI~D 286 (476)
..+.+++.|++ .++++++||+||+ ++.+|.+.|+++|+++|+++|++||++||+|
T Consensus 546 ~~~~~~f~~~r~~~~~~~~~~~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~D 625 (817)
T PLN02974 546 ESRDEVFDKTRDSTPLAKAYRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFD 625 (817)
T ss_pred ccccccccccccchhhhHHHHHHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEe
Confidence 02567777753 3568999999995 8999999999999999999999999999999
Q ss_pred ccccCc-cccccchhhccCCCCchhhhhhhcCCC-CcEEEEEecHHHHHhhcCC---CCccccCCCCCcHHHHHHHHHHH
Q 011856 287 EVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGG-LPVGAYGGRRDIMEMVAPA---GPMYQAGTLSGNPLAMTAGIHTL 361 (476)
Q Consensus 287 Ev~~g~-r~g~~~~~~~~g~~pDi~t~sK~lg~G-~~iG~~~~~~~i~~~l~~~---~~~~~~~t~~~~~~~~aaa~aal 361 (476)
||+||| |+|.+|+++++|+.|||+|++|+++|| +|+|++++++++++.+... ..+.|++||++||++|++|+++|
T Consensus 626 EV~TGfGRtG~~fa~e~~gv~PDIi~~gKgLtgG~~Plaa~l~~~~I~~~f~~~~~~~~~~hg~Ty~gnpl~cAaala~L 705 (817)
T PLN02974 626 EVFTGLWRLGVESAWELLGCKPDIACYAKLLTGGLVPLAATLATEEVFEAFRGPSKLDALLHGHSYTAHPMGCAAAAKAL 705 (817)
T ss_pred ecccCCCcccchhhHHhcCCCCCEEeecccccCCCCccEEEEEcHHHHHhhccccccCCcccCCCCCcCHHHHHHHHHHH
Confidence 999999 999999999999999999999999999 5999999999999988521 24568999999999999999999
Q ss_pred HHhcCCCHHHH----HHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCc-CchhhcccchHHHHHHHHHHH-
Q 011856 362 KRLKEPGTYEY----LNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVY-NFEDAKKSETTKFARFYRGML- 435 (476)
Q Consensus 362 ~~~~~~~~~~~----~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~- 435 (476)
+.++++++.++ ..++++++.+.|.+...+++.+.++++.|+|++++|.++... .+ .......+.+.++
T Consensus 706 ~~~~~~~~~~~l~~~~~~l~~~l~~~l~~~l~~~p~V~~VRg~Gl~~~iel~~~~~~~~~------~~~~a~~v~~~~~~ 779 (817)
T PLN02974 706 QWYKDPSTNPNLIPPGSRLRELWDEELVRAISSLPNVERVVSLGTVLALELDAEGSGSGY------SSLYARSVVRRLRR 779 (817)
T ss_pred HHHHcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEEeeeeEEEEEEecCCccccc------chHHHHHHHHHHHH
Confidence 99988755545 455556666666444456889999999999999999754311 11 2234567788888
Q ss_pred HCCeEeccCCCcceEE--eCCCcHHHHHHHHHHHHHHH
Q 011856 436 EEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAEKVK 471 (476)
Q Consensus 436 ~~Gv~~~~~~~~~~~~--~~~~t~e~i~~~~~~l~~~~ 471 (476)
++||++++.+ +.+++ ++.+++++++++++++++.+
T Consensus 780 ~~Gl~~r~~G-nvi~l~pP~~i~~e~l~~~~~~l~~~~ 816 (817)
T PLN02974 780 EDGIYARPLG-NVVYLMCGPTTSPETCTRLLRKVYRRL 816 (817)
T ss_pred hCCEEEEecC-CEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 9999999875 34443 78999999999999999875
No 76
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=6e-56 Score=445.58 Aligned_cols=364 Identities=28% Similarity=0.393 Sum_probs=313.3
Q ss_pred CCeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcCC--CCCCCHHHHHHHHHHHhhCCC--CC
Q 011856 81 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTS--FGAPCLLENVLAEMVISAVPS--IE 156 (476)
Q Consensus 81 ~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~--~~~~~~~~~~la~~l~~~~~~--~e 156 (476)
.|+++.+++|+++||.|||+||||.+++++++|||+||+|.+++.+++++... ..+++....+|++++++.++. .+
T Consensus 25 ~~~~~~~~~G~~~~d~dg~~~lD~~s~~~~~~lG~~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~ 104 (398)
T PRK03244 25 PPLALVRGEGAVVWDVDGKEYLDLLGGIAVNALGHAHPAVVEAVTRQLATLGHVSNLFATEPQIALAERLVELLGAPEGG 104 (398)
T ss_pred CCceEEEeeecEEEECCCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhccCccCccCCHHHHHHHHHHHHhCCCCCCC
Confidence 38999999999999999999999999999999999999999999999997422 235677778999999999862 47
Q ss_pred eEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHH
Q 011856 157 MVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSAL 236 (476)
Q Consensus 157 ~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l 236 (476)
+++|++||+||++.|+++++. +++++||.++++|||++..++...+.......+ .....++..+|++|++++
T Consensus 105 ~v~~~~sgsea~~~al~~~~~-~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~d~~~l 176 (398)
T PRK03244 105 RVFFCNSGAEANEAAFKLARL-TGRTKIVAAEGGFHGRTMGALALTGQPAKRAPF-------EPLPGGVEHVPYGDVDAL 176 (398)
T ss_pred EEEEeCchHHHHHHHHHHHHH-HCCCeEEEECCCcCCccHHHHhccCCcccccCC-------CCCCCCceEeCCCCHHHH
Confidence 999999999999999999877 677899999999999999888776643211111 011234677889999999
Q ss_pred HHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccchhhccCCCCchhhhhhh
Q 011856 237 ENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKI 315 (476)
Q Consensus 237 e~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pDi~t~sK~ 315 (476)
++.++ +++++|++||+++++|.+.|+++|+++|+++|++||++||+||+|+|| |+|.+++++++++.||++||||+
T Consensus 177 ~~~~~---~~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pDi~t~sK~ 253 (398)
T PRK03244 177 AAAVD---DDTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGAWFAHQHDGVTPDVVTLAKG 253 (398)
T ss_pred HHhhc---CCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccchHHhhhhhCCCCCEEEEchh
Confidence 99885 378999999999999999999999999999999999999999999999 98887777888999999999999
Q ss_pred cCCCCcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCce
Q 011856 316 IGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAI 395 (476)
Q Consensus 316 lg~G~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 395 (476)
+++|+|+|++++++++++.+. ...+.+||++||++|+++.++|+.++++++.++++++++++++.|+++ .++.+.
T Consensus 254 l~~G~~ig~~~~~~~~~~~~~---~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~~--~~~~~~ 328 (398)
T PRK03244 254 LGGGLPIGACLAFGPAADLLT---PGLHGSTFGGNPVACAAALAVLDTIASEGLLENAERLGEQLRAGIEAL--GHPLVD 328 (398)
T ss_pred hhCCcccEEEEEcHHHHhhcc---CCCCcCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhc--CCCcee
Confidence 999999999999999999886 344678999999999999999998888889999999999999999886 356667
Q ss_pred EeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCCcceEE--eCCCcHHHHHHHHHHHHHHHHH
Q 011856 396 CGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAEKVKMR 473 (476)
Q Consensus 396 ~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~--~~~~t~e~i~~~~~~l~~~~~~ 473 (476)
.+++.|+++++++..+ ...++.+.|+++||++.+.+.+.+|+ ++.+|++|+++++++|++++.+
T Consensus 329 ~v~g~g~~~~i~~~~~--------------~~~~~~~~l~~~Gv~~~~~~~~~iR~~p~~~~t~~~i~~~~~~l~~~l~~ 394 (398)
T PRK03244 329 HVRGRGLLLGIVLTAP--------------VAKAVEAAAREAGFLVNAVAPDVIRLAPPLIITDAQVDAFVAALPAILDA 394 (398)
T ss_pred eEeeccEEEEEEEecc--------------HHHHHHHHHHHCCeEEeecCCCEEEEECCCcCCHHHHHHHHHHHHHHHHh
Confidence 7889999999998421 23578899999999998876667776 4778999999999999999976
Q ss_pred h
Q 011856 474 F 474 (476)
Q Consensus 474 ~ 474 (476)
+
T Consensus 395 ~ 395 (398)
T PRK03244 395 A 395 (398)
T ss_pred c
Confidence 4
No 77
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=9.6e-56 Score=441.09 Aligned_cols=362 Identities=29% Similarity=0.406 Sum_probs=311.9
Q ss_pred CCeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcCC--CCCCCHHHHHHHHHHHhhCCCCCeE
Q 011856 81 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTS--FGAPCLLENVLAEMVISAVPSIEMV 158 (476)
Q Consensus 81 ~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~--~~~~~~~~~~la~~l~~~~~~~e~v 158 (476)
+|+++.+++|+|+||+|||+||||.+++++.+|||+||+|.+|+.+++++... .....+++.+|++++.+..+ .+++
T Consensus 11 ~~~~~~~~~G~~~~d~~G~~~lD~~s~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~-~~~~ 89 (377)
T PRK02936 11 FPIDIVKGKGTKVTDNNGKTYLDFTSGIAVCNLGHCHPTVTKAVQEQLDDIWHVSNLFTNSLQEEVASLLAENSA-GDLV 89 (377)
T ss_pred CCceEEEeecCEEEeCCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhcCC-CCEE
Confidence 48899999999999999999999999999999999999999999999987422 22457888999999988764 5799
Q ss_pred EEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHH
Q 011856 159 RFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALEN 238 (476)
Q Consensus 159 ~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~ 238 (476)
+|++||++|++.|++++|.++++++||.++++|||++...+..++.......+ . ....++..+|++|++++++
T Consensus 90 ~~~~sG~~a~~~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~------~-~~~~~~~~~~~~d~~~l~~ 162 (377)
T PRK02936 90 FFCNSGAEANEAALKLARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGF------G-PLLPGFTHVPFNDIKALKE 162 (377)
T ss_pred EEeCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCCcHHhhhccCCccccccC------C-CCCCCceEeCCCCHHHHHH
Confidence 99999999999999999999999999999999999998888766542211111 0 1112456789999999999
Q ss_pred HHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccchhhccCCCCchhhhhhhcC
Q 011856 239 LFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIG 317 (476)
Q Consensus 239 ~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pDi~t~sK~lg 317 (476)
.+.. ++++|++||+++++|.+.++++|+++|+++|++||+++|+||+|+|| ++|.++..+++++.||++||||+++
T Consensus 163 ~~~~---~~~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~~~~~~~~~~di~t~sK~l~ 239 (377)
T PRK02936 163 VMNE---EVAAVMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLFAYEQFGLDPDIVTVAKGLG 239 (377)
T ss_pred hccC---CeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhhCCCCcEEEEccccc
Confidence 8863 68999999999999999999999999999999999999999999999 8887777778899999999999999
Q ss_pred CCCcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCceEe
Q 011856 318 GGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICG 397 (476)
Q Consensus 318 ~G~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v 397 (476)
+|+|+|++++++++++.+.. ..+..|+++||++++++.++|+.+..++++++++++++++++.|++...+++.+..+
T Consensus 240 ~G~~ig~v~~~~~~~~~~~~---~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v 316 (377)
T PRK02936 240 NGIPVGAMIGKKELGTAFGP---GSHGSTFGGNPLAMAAAKEVLQVIKQPSFLEEVQEKGEYFLQKLQEELEHLECVKNI 316 (377)
T ss_pred CCCccEEEEEcHHHHhhccC---CCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCcEEeE
Confidence 99999999999999998863 346678899999999999999998767899999999999999999876667777778
Q ss_pred eeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCCcceEEe--CCCcHHHHHHHHHHHHHHH
Q 011856 398 GYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFTS--LAHSSDDIQHTITAAEKVK 471 (476)
Q Consensus 398 ~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~~--~~~t~e~i~~~~~~l~~~~ 471 (476)
++.|.++++++.++ ...+.+.|.++||++.+.+.+.+|++ +.++++++++++++|++++
T Consensus 317 ~~~g~~~~i~~~~~---------------~~~~~~~l~~~gv~v~~~g~~~lRi~p~~~~~~~~i~~~i~~l~~~~ 377 (377)
T PRK02936 317 RGKGLMIGIECTEE---------------VAPVIEQLREEGLLVLSAGPNVIRLLPPLVVTKEELDQAVYLLKKVL 377 (377)
T ss_pred eecceEEEEEecch---------------HHHHHHHHHHCCeEEecCCCCEEEEECCcccCHHHHHHHHHHHHHhC
Confidence 88999999998531 35678889999999998876777875 7899999999999998763
No 78
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=100.00 E-value=9.3e-55 Score=439.88 Aligned_cols=394 Identities=35% Similarity=0.533 Sum_probs=331.7
Q ss_pred HHHHhhhCCCCCCCccccccccCCCCeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcCCCCC
Q 011856 57 FNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGA 136 (476)
Q Consensus 57 ~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~~~ 136 (476)
+++++++++.|++ ..++|+++++++|+++||.||++||||.++++++++||+||+|.+++.+++.++..+..
T Consensus 2 ~~~~~~~~~~~~~--------~~~~~~~~~~~~g~~~~d~dG~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~ 73 (413)
T cd00610 2 FERDRKVLWHGYT--------VRPYPLVIVRAEGAYLYDVDGNRYLDFLSGIGVLNLGHNHPEVVEALKEQLAKLTHFSL 73 (413)
T ss_pred cchhhhhcccccc--------CCCCCceEEeeecCEEEeCCCCEEEEcCccHHhhccCCCCHHHHHHHHHHHHhCcCccC
Confidence 4566778888764 11358999999999999999999999999999999999999999999999987654433
Q ss_pred ---CCHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCC
Q 011856 137 ---PCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLP 212 (476)
Q Consensus 137 ---~~~~~~~la~~l~~~~~-~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~ 212 (476)
.++...++++++++.++ +.++++|++||++|++.++++++.++++++|++++++|||++...+..++....
T Consensus 74 ~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgsea~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~----- 148 (413)
T cd00610 74 GFFYNEPAVELAELLLALTPEGLDKVFFVNSGTEAVEAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKY----- 148 (413)
T ss_pred cccCCHHHHHHHHHHHHhCCCCCCEEEEcCcHHHHHHHHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccc-----
Confidence 47889999999999997 689999999999999999999998899999999999999999988877654211
Q ss_pred CCCCCCCCCCCceeeccCC-----------CHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCC
Q 011856 213 DSPGVPKGATYETLTAPFN-----------DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGA 281 (476)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~-----------d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~ 281 (476)
.+.......++..+|++ |+++|++.++++++++++|++||+++++|.+.++++|+++|+++|++||+
T Consensus 149 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~ 226 (413)
T cd00610 149 --RGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEEHPEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGI 226 (413)
T ss_pred --cccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCC
Confidence 11111222356778887 89999999987666899999999999999999999999999999999999
Q ss_pred EEEEeccccCc-cccccchhhccCCCCchhhhhhhcCCCCcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHH
Q 011856 282 LLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHT 360 (476)
Q Consensus 282 llI~DEv~~g~-r~g~~~~~~~~g~~pDi~t~sK~lg~G~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aa 360 (476)
+||+||+|+|| +.|..+..+++++.||++|+||++++|+|+|++++++++++.+. .....+.+|+++|+++++++.++
T Consensus 227 ~li~Dev~~g~g~~g~~~~~~~~~~~~d~~t~sK~l~~g~~~g~~~~~~~~~~~~~-~~~~~~~~t~~~~~~~~~a~~a~ 305 (413)
T cd00610 227 LLIADEVQTGFGRTGKMFAFEHFGVEPDIVTLGKGLGGGLPLGAVLGREEIMDAFP-AGPGLHGGTFGGNPLACAAALAV 305 (413)
T ss_pred EEEEeccccCCCcCcchhhHhhcCCCCCeEEEcccccCccccEEEEEcHHHHHhhc-cCCCCCCCCCCcCHHHHHHHHHH
Confidence 99999999999 88877778888999999999999999999999999999999861 12455678999999999999999
Q ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeE
Q 011856 361 LKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVY 440 (476)
Q Consensus 361 l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~ 440 (476)
|+.++++++.+++++++++++++|+++...++.+..+++.|.++++.+.++...+ .++......+.+.|+++||+
T Consensus 306 l~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~gv~ 380 (413)
T cd00610 306 LEVLEEEGLLENAAELGEYLRERLRELAEKHPLVGDVRGRGLMIGIELVKDRATK-----PPDKELAAKIIKAALERGLL 380 (413)
T ss_pred HHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCcEEEeecCceEEEEEEecCCCcC-----CcchHHHHHHHHHHHHCCeE
Confidence 9998878899999999999999999887655667777889999999986532111 12334557788999999999
Q ss_pred eccCCCcceEE--eCCCcHHHHHHHHHHHHHHH
Q 011856 441 FAPSQFEAGFT--SLAHSSDDIQHTITAAEKVK 471 (476)
Q Consensus 441 ~~~~~~~~~~~--~~~~t~e~i~~~~~~l~~~~ 471 (476)
+.+++...+++ ++.+|++++++++++|++++
T Consensus 381 v~~~~~~~lR~~~~~~~t~~~i~~~~~~l~~~l 413 (413)
T cd00610 381 LRPSGGNVIRLLPPLIITEEEIDEGLDALDEAL 413 (413)
T ss_pred EeecCCCEEEEECCCcCCHHHHHHHHHHHHHhC
Confidence 99875455665 67899999999999998763
No 79
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=100.00 E-value=9.6e-55 Score=436.65 Aligned_cols=368 Identities=24% Similarity=0.365 Sum_probs=312.0
Q ss_pred CCeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcCCCC--CCCHHHHHHHHHHHhhCCCCCeE
Q 011856 81 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFG--APCLLENVLAEMVISAVPSIEMV 158 (476)
Q Consensus 81 ~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~~--~~~~~~~~la~~l~~~~~~~e~v 158 (476)
.|+++.+++|+|+||.||++||||.+++++..+||+||+|.+|+.+++++..... +..+...+|+++|++.+ +.+++
T Consensus 19 ~~~~~~~~~g~~~~~~~g~~~lD~~s~~~~~~~Gh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~ 97 (401)
T TIGR01885 19 LPVVFSKAEGVHVWDVEGKRYLDFLSAYSAVNQGHCHPKIVKALTEQAQKLTLSSRAFYNDVFGEFAEYVTKLF-GYDKV 97 (401)
T ss_pred CCceEEeeecCEEEeCCCCEEEEcccCHhhccCCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhhc-CCCEE
Confidence 4788999999999999999999999999999999999999999999998743222 35678899999999988 46899
Q ss_pred EEeCCHHHHHHHHHHHHHhc--------cCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccC
Q 011856 159 RFVNSGTEACMGVLRLARAF--------TGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPF 230 (476)
Q Consensus 159 ~~~~sGseA~~~al~~ar~~--------~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (476)
+|++||++||+.|++++|.+ +++..|+.++++|||++...+..++.......+ + .....+..++|
T Consensus 98 ~~~~SGs~A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~----~---~~~~~~~~~~~ 170 (401)
T TIGR01885 98 LPMNTGAEAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNF----G---PYVPGFKKIPY 170 (401)
T ss_pred EEeCccHHHHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCccccccc----C---CCCCCceEeCC
Confidence 99999999999999999876 357889999999999998888776542211100 0 00123577899
Q ss_pred CCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccchhhccCCCCch
Q 011856 231 NDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDL 309 (476)
Q Consensus 231 ~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pDi 309 (476)
+|+++||++++++++++++|++||+++++|.+.|+++||++|+++|++||+++|+||+|+|| ++|.+++.+++++.||+
T Consensus 171 ~d~~~le~~l~~~~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~G~~~~~~~~~~~~di 250 (401)
T TIGR01885 171 NNLEALEEALEDHGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTGKLLCVDHENVKPDI 250 (401)
T ss_pred CCHHHHHHHHHhcCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHHhhcCCCCCE
Confidence 99999999998666689999999999999999999999999999999999999999999999 98887777788999999
Q ss_pred hhhhhhcCCC-CcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHh
Q 011856 310 TTLGKIIGGG-LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAG 388 (476)
Q Consensus 310 ~t~sK~lg~G-~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~ 388 (476)
+++||++++| +|+|++++++++++.+.. ..+..|++++|++++++.++|+.++++++.++++++++++++.|+++.
T Consensus 251 ~~~gK~l~~g~~~ig~v~~~~~i~~~~~~---~~~~~t~~~~p~~~~aa~a~L~~i~~~~l~~~~~~~~~~~~~~L~~l~ 327 (401)
T TIGR01885 251 VLLGKALSGGVYPVSAVLADDDVMLTIKP---GEHGSTYGGNPLACAVAVAALEVLEEEKLAENAEKLGEIFRDQLKKLP 327 (401)
T ss_pred EEeeccccCCCCCcEEEEEcHHHHhhccC---CCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhcc
Confidence 9999999976 899999999999988763 335678899999999999999999877889999999999999999873
Q ss_pred hhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCCcceEE--eCCCcHHHHHHHHHH
Q 011856 389 KKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTITA 466 (476)
Q Consensus 389 ~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~--~~~~t~e~i~~~~~~ 466 (476)
.+++.++++.|.|+.+++..+.. .....++.+.|.++||++.+.+...+|+ ++.+|+++|++++++
T Consensus 328 --~~~~~~~~g~g~~~~i~~~~~~~----------~~~~~~l~~~l~~~Gv~v~~~~~~~lRi~p~l~~t~~~i~~~l~~ 395 (401)
T TIGR01885 328 --KPIITEVRGRGLLNAIVIDESKT----------GRTAWDLCLKLKEKGLLAKPTHGNIIRLAPPLVITEEQLDEGLEI 395 (401)
T ss_pred --CCceeEEeecCeeEEEEeccCcc----------hhHHHHHHHHHHhCCEEEEecCCCEEEEeCCccCCHHHHHHHHHH
Confidence 35667788999999998853210 1234678899999999998877667777 468999999999999
Q ss_pred HHHHH
Q 011856 467 AEKVK 471 (476)
Q Consensus 467 l~~~~ 471 (476)
|++++
T Consensus 396 l~~~l 400 (401)
T TIGR01885 396 IKKVI 400 (401)
T ss_pred HHHHh
Confidence 99876
No 80
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=100.00 E-value=8.7e-54 Score=430.35 Aligned_cols=364 Identities=24% Similarity=0.333 Sum_probs=306.9
Q ss_pred CCeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcCCC--CCCCHHHHHHHHHHHhhCCCCCeE
Q 011856 81 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSF--GAPCLLENVLAEMVISAVPSIEMV 158 (476)
Q Consensus 81 ~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~--~~~~~~~~~la~~l~~~~~~~e~v 158 (476)
.|+++.+++|+|+||+||++||||.+++++.++||+||+|.+|+.+++++.... ...++...+|+++++++++ .+++
T Consensus 23 ~~~~~~~~~G~~~~d~~g~~~lD~~~~~~~~~~Gh~~~~i~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~ 101 (401)
T PRK00854 23 LDVVLTRGEGVWVWDTDGNRYLDCLSAYSAVNQGHCHPKILAAMVEQAGRLTLTSRAFRNDQLAPLYEELAALTG-SHKV 101 (401)
T ss_pred CCceEEeeeeCEEEECCCCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhhCC-CCEE
Confidence 478999999999999999999999999999999999999999999999985332 2456788899999999884 5799
Q ss_pred EEeCCHHHHHHHHHHHHHhc--------cCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccC
Q 011856 159 RFVNSGTEACMGVLRLARAF--------TGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPF 230 (476)
Q Consensus 159 ~~~~sGseA~~~al~~ar~~--------~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (476)
+|++||++|++.|++++|.+ +++++||+++.+|||++..++..++.......+ .....++..+||
T Consensus 102 ~~~~SGs~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~ 174 (401)
T PRK00854 102 LPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGF-------GPFTPGFRVVPF 174 (401)
T ss_pred EEeCCcHHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccccC-------CCCCCCeEEeCC
Confidence 99999999999999999876 356799999999999988777655432111100 011124677899
Q ss_pred CCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccchhhccCCCCch
Q 011856 231 NDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDL 309 (476)
Q Consensus 231 ~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pDi 309 (476)
+|++++++.+.+ ++++|++||+++++|.+.|+++||++|+++|++||++||+||+|+|| ++|.++..+++++.||+
T Consensus 175 ~d~~~le~~i~~---~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g~~~~~~~~g~~~D~ 251 (401)
T PRK00854 175 GDAEALEAAITP---NTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTGKLLAEEHEGIEADV 251 (401)
T ss_pred CCHHHHHHHhCC---CeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCchHhHHhhcCCCCCE
Confidence 999999999863 68999999999999999999999999999999999999999999999 88876666788999999
Q ss_pred hhhhhhcCCC-CcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHh
Q 011856 310 TTLGKIIGGG-LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAG 388 (476)
Q Consensus 310 ~t~sK~lg~G-~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~ 388 (476)
+++||++++| +|+|++++++++++.+. ...+..|++++|+.++++.++|+.++++++.++++++++++.+.|+++.
T Consensus 252 ~~~~K~l~gg~~~ig~v~~~~~~~~~l~---~~~~~~t~~~~~~~~aa~~a~L~~l~~~~~~~~~~~~~~~l~~~L~~~~ 328 (401)
T PRK00854 252 TLIGKALSGGFYPVSAVLSNSEVLGVLK---PGQHGSTFGGNPLACAVARAALKVLTEEGMIENAAEMGAYFLEGLRSIR 328 (401)
T ss_pred EEecccccCCccCeEEEEEcHHHHhccc---CCCCCCCCCcCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhhc
Confidence 9999999987 69999999999999876 3446778899999999999999998777789999999999999999873
Q ss_pred hhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCCcceEEe--CCCcHHHHHHHHHH
Q 011856 389 KKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFTS--LAHSSDDIQHTITA 466 (476)
Q Consensus 389 ~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~~--~~~t~e~i~~~~~~ 466 (476)
. ....++++.|.|+.+.+..+ .....++.+.|+++||++.+.+...+|++ +.+++++|++++++
T Consensus 329 ~--~~~~~~~g~g~~~~i~~~~~------------~~~~~~~~~~L~~~GV~v~~~~~~~lR~~p~~~~t~e~i~~~i~~ 394 (401)
T PRK00854 329 S--NIVREVRGRGLMLAVELEPE------------AGGARQYCEALKERGLLAKDTHDHTIRLAPPLVITREQVDWALEQ 394 (401)
T ss_pred c--CceEEEeccceEEEEEEecC------------chhHHHHHHHHHHCCeEEecCCCCEEEEeCCcccCHHHHHHHHHH
Confidence 2 33456788999999887532 11236788999999999987655677775 68999999999999
Q ss_pred HHHHHH
Q 011856 467 AEKVKM 472 (476)
Q Consensus 467 l~~~~~ 472 (476)
|++++.
T Consensus 395 l~~~l~ 400 (401)
T PRK00854 395 IAKVLA 400 (401)
T ss_pred HHHHhh
Confidence 998864
No 81
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=8.5e-54 Score=430.30 Aligned_cols=366 Identities=28% Similarity=0.429 Sum_probs=315.2
Q ss_pred CCeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcC--CCCCCCHHHHHHHHHHHhhCCCCCeE
Q 011856 81 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT--SFGAPCLLENVLAEMVISAVPSIEMV 158 (476)
Q Consensus 81 ~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~--~~~~~~~~~~~la~~l~~~~~~~e~v 158 (476)
.|+++.+++|+++||.|||+||||.++++++++||+||++.+++.+++++.. ...++.+...+|++++++.. +.+++
T Consensus 21 ~~~~~~~~~G~~~~d~dg~~~iD~~~g~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~-~~~~v 99 (396)
T PRK02627 21 LPIAFVRGEGARLWDDDGKEYLDFLAGIAVNNLGHCHPKLVEAIQEQAAKLIHTSNLYYIEPQEELAEKLVELS-GMDKV 99 (396)
T ss_pred CCceEEeeeeCEEEeCCCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhhc-CCCEE
Confidence 4899999999999999999999999999999999999999999999998742 23457889999999999987 67999
Q ss_pred EEeCCHHHHHHHHHHHHHhccCC-----ceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCH
Q 011856 159 RFVNSGTEACMGVLRLARAFTGR-----ERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDV 233 (476)
Q Consensus 159 ~~~~sGseA~~~al~~ar~~~~~-----~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 233 (476)
+|++||+||++.|+++++.++++ ++|+.++++|||++...+...+......... .....+..++++|+
T Consensus 100 ~~~~gg~eA~~~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~d~ 172 (396)
T PRK02627 100 FFCNSGAEANEAAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQEGFE-------PLVEGFIYVPFNDI 172 (396)
T ss_pred EECCCcHHHHHHHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCccccccCC-------CCCCCceEeCCCCH
Confidence 99999999999999999888776 7899999999999988887766532211110 01123566788999
Q ss_pred HHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccchhhccCCCCchhhh
Q 011856 234 SALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTL 312 (476)
Q Consensus 234 ~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pDi~t~ 312 (476)
+++++.+. +++++|++||+++++|...++++++++|+++|++||++||+||+|+|| ++|.+++.+++++.||++||
T Consensus 173 ~~l~~~i~---~~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~~~~~~~~~~~pdi~t~ 249 (396)
T PRK02627 173 EALKAAIT---DKTAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGKLFAYQHYGIEPDIMTL 249 (396)
T ss_pred HHHHHhcC---CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCceeeehhcCCCCCEEEE
Confidence 99999985 378999999999999988888999999999999999999999999999 88877777788999999999
Q ss_pred hhhcCCCCcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcC
Q 011856 313 GKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAG 392 (476)
Q Consensus 313 sK~lg~G~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 392 (476)
||++++|+|+||+++++++++.+.. ..+..|+++|+++++++.++|+.++++++.+++++++++++++|+++..+++
T Consensus 250 sK~~~~G~rig~~~~~~~~~~~~~~---~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 326 (396)
T PRK02627 250 AKGLGGGVPIGAVLAKEKVADVFTP---GDHGSTFGGNPLACAAALAVIEIIEEEGLLENAAEVGEYLRAKLRELLEKYP 326 (396)
T ss_pred cchhhCCcccEEEEEcHHHHhccCC---CCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999988763 3466789999999999999999887788999999999999999999877677
Q ss_pred CceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCCcceEE--eCCCcHHHHHHHHHHHHHH
Q 011856 393 HAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAEKV 470 (476)
Q Consensus 393 ~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~--~~~~t~e~i~~~~~~l~~~ 470 (476)
....+++.|.++++++.. ...++++.|+++||++.+.+.+.+|+ ++.++++++++++++|+++
T Consensus 327 ~~~~~~~~g~~~~i~~~~---------------~~~~~~~~l~~~Gv~v~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~~ 391 (396)
T PRK02627 327 GIKEVRGLGLMIGIELDR---------------PAAEIVKKALEKGLLINVTGDNVLRLLPPLIISKEEIDEAVDRLEEV 391 (396)
T ss_pred CeeeeccCcEEEEEEecC---------------cHHHHHHHHHHCCeEEeecCCCEEEEECCcccCHHHHHHHHHHHHHH
Confidence 667788889999998821 12578899999999999877666777 4589999999999999999
Q ss_pred HHHhh
Q 011856 471 KMRFL 475 (476)
Q Consensus 471 ~~~~~ 475 (476)
+++++
T Consensus 392 l~~~~ 396 (396)
T PRK02627 392 LKELL 396 (396)
T ss_pred HHhhC
Confidence 98753
No 82
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=100.00 E-value=4.3e-55 Score=389.30 Aligned_cols=401 Identities=22% Similarity=0.332 Sum_probs=330.3
Q ss_pred HHHHHHHhhhCCCCCCCccccccccCCCCeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhc-C
Q 011856 54 EEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKG-T 132 (476)
Q Consensus 54 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~-~ 132 (476)
.+..++.++++.. ....|.+. +|+.+.|++|.|++|.+|++|||+.+|. .-.||+||+|++|...|+... +
T Consensus 8 ~etlklRk~hIG~----~Cq~Fy~s--DP~kivRaq~QYmfDE~g~~yLDCInNV--aHvghchp~VV~A~~kQmat~~t 79 (452)
T KOG1403|consen 8 TETLKLRKQHIGQ----ACQLFYRS--DPLKIVRAQGQYMFDEEGTRYLDCINNV--AHVGHCHPEVVRAGAKQMATIST 79 (452)
T ss_pred HHHHhHHHhccCc----ceeEEecC--CchhhehhccceeeccCcccHHHHhhhh--hhcccCCHHHHHHHHHHHhHhcc
Confidence 5677888888754 33444332 5999999999999999999999999997 678999999999999999874 3
Q ss_pred CCCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcC------CCC
Q 011856 133 SFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAG------SGV 206 (476)
Q Consensus 133 ~~~~~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g------~~~ 206 (476)
+..+.+....+.++.|...+|+.+-++|+|||+|||+.|+|+||.+++..++|..+..|||+....+..+. .++
T Consensus 80 N~RFlhd~lv~cA~~l~stlPeLsvc~F~NSGSEANDLALRLAR~ftkhqDvItldHAYHGHl~s~mE~SPYKF~~g~~v 159 (452)
T KOG1403|consen 80 NNRFLHDELVQCARTLTSTLPELSVCFFVNSGSEANDLALRLARNFTKHQDVITLDHAYHGHLQSVMEVSPYKFNQGGGV 159 (452)
T ss_pred cchhhHHHHHHHHHHHhhcCCCceEEEEecCCchhhHHHHHHHHhhcccCceEEEechhccceeeeeeccceeccCCCCc
Confidence 34455666788999999999999999999999999999999999999999999999999999877665432 111
Q ss_pred ccCCCCCCCCCCCCCCCceeeccCC-------C-----HHHHHHHHhc---CCCCeEEEEEcccCCCCCcccCCHHHHHH
Q 011856 207 ATLGLPDSPGVPKGATYETLTAPFN-------D-----VSALENLFEN---NKGEIAAIILEPVVGNSGFIAPKPDFLNA 271 (476)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~-------d-----~~~le~~l~~---~~~~~a~vi~ep~~~~~G~i~~~~~~l~~ 271 (476)
.. |+.-. -...++++.-.|. | .+.+++++++ .+..++++|.|..++-||.+.||.+|++.
T Consensus 160 ~k---pd~VH--VAPcPDvyrGK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~ 234 (452)
T KOG1403|consen 160 AK---PDYVH--VAPCPDVYRGKFRDKMYPDADMGALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQA 234 (452)
T ss_pred CC---CceeE--ecCCccccccccccccCCcccchhhhhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHH
Confidence 11 11000 0111122222221 1 3456666643 23468999999999999999999999999
Q ss_pred HHHHHHHhCCEEEEeccccCc-cccc-cchhhccCCCCchhhhhhhcCCCCcEEEEEecHHHHHhhcCCCCccccCCCCC
Q 011856 272 IRRITKENGALLIFDEVMTGF-RLAY-GGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSG 349 (476)
Q Consensus 272 l~~l~~~~g~llI~DEv~~g~-r~g~-~~~~~~~g~~pDi~t~sK~lg~G~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~ 349 (476)
+.+..+.+|-+.|.||||+|| |.|. .|+++.+++.|||+|++|.+|+|.|+++++.++++.+.+...+ +..++||++
T Consensus 235 Va~~Vr~aGGv~IaDEVQvGFGRvG~hyWafq~y~fiPDIVtmgKpmGNGhPVa~VattkeIA~Af~atg-v~YFNTyGG 313 (452)
T KOG1403|consen 235 VADAVRSAGGVCIADEVQVGFGRVGSHYWAFQTYNFIPDIVTMGKPMGNGHPVAAVATTKEIAQAFHATG-VEYFNTYGG 313 (452)
T ss_pred HHHHHhcCCCeEEeehhhhcccccchhhhhhhhhccccchheecccCCCCCeeeEEeccHHHHHHhcccc-ceehhccCC
Confidence 999999999999999999999 9986 6888999999999999999999999999999999999987432 446789999
Q ss_pred cHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHH
Q 011856 350 NPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFAR 429 (476)
Q Consensus 350 ~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 429 (476)
||++|+++++.++.++++++.++..+.+.+|...|+++..+++++.++||.|+|+++++.++.. .+.|+...+..
T Consensus 314 nPVsCAv~laVm~v~e~E~Lq~ha~~vG~~L~~lL~~~k~kh~~IGDvRGvGLFiGIdLVkD~~-----tRtP~tk~A~~ 388 (452)
T KOG1403|consen 314 NPVSCAVGLAVMRVCEDENLQEHAQQVGEKLEVLLRRLKQKHECIGDVRGVGLFIGIDLVKDRK-----TRTPDTKEAHW 388 (452)
T ss_pred CchhHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhccceeccccceEEEeeeeecccc-----cCCCcHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999987642 34577777788
Q ss_pred HHHHHHHC-CeEeccCCCcceEE----eCCCcHHHHHHHHHHHHHHHHH
Q 011856 430 FYRGMLEE-GVYFAPSQFEAGFT----SLAHSSDDIQHTITAAEKVKMR 473 (476)
Q Consensus 430 ~~~~l~~~-Gv~~~~~~~~~~~~----~~~~t~e~i~~~~~~l~~~~~~ 473 (476)
+...|.+. ||++...+++...+ +++.+++++++++..|++++..
T Consensus 389 ~v~rlke~y~VLlsaDGPh~NilKiKPPmCFneena~e~v~~ld~iLT~ 437 (452)
T KOG1403|consen 389 VVNRLKELYRVLLSADGPHRNILKIKPPMCFNEENADEFVLGLDEILTV 437 (452)
T ss_pred HHHHHHHhhhEEEecCCCCCceeecCCCcccChhhHHHHHHHHHHHHHH
Confidence 88888865 79998877665433 7899999999999999998863
No 83
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=100.00 E-value=1.2e-52 Score=422.37 Aligned_cols=370 Identities=26% Similarity=0.381 Sum_probs=310.0
Q ss_pred CCeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcCCCC--CCCHHHHHHHHHHHhhCCCCCeE
Q 011856 81 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFG--APCLLENVLAEMVISAVPSIEMV 158 (476)
Q Consensus 81 ~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~~--~~~~~~~~la~~l~~~~~~~e~v 158 (476)
.|+++.+++|+|+||.|||+||||.+++++.++||+||+|.+|+.+++++..... +.++...++++.+.+.. +.+++
T Consensus 13 ~~~~~~~~~G~~~~d~dg~~~lD~~~~~~~~~~Gh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~ 91 (400)
T PTZ00125 13 LPVVLKRGKGVFVWDVEGKKYYDFLSAYSAVNQGHCHPKILAALINQAQKLTLTSRAFYNDVLGLAEKYITDLF-GYDKV 91 (400)
T ss_pred CCccEEeeecCEEEeCCCCEEEEcccCHhhccCCcCCHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHhCC-CCCEE
Confidence 4789999999999999999999999999999999999999999999998743222 23566677777777665 67899
Q ss_pred EEeCCHHHHHHHHHHHHHhc--------cCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccC
Q 011856 159 RFVNSGTEACMGVLRLARAF--------TGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPF 230 (476)
Q Consensus 159 ~~~~sGseA~~~al~~ar~~--------~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (476)
+|++||++|++.|+++++.+ +++++|+.++++|||++...+..++.......+ .+ ....+..+++
T Consensus 92 ~~~~SGs~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~--~~-----~~~~~~~~~~ 164 (400)
T PTZ00125 92 LPMNSGAEAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNF--GP-----FVPGFELVDY 164 (400)
T ss_pred EEeCCcHHHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccC--CC-----CCCCceEeCC
Confidence 99999999999999998754 246789999999999999888776542211100 00 0113566788
Q ss_pred CCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccchhhccCCCCch
Q 011856 231 NDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDL 309 (476)
Q Consensus 231 ~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pDi 309 (476)
+|+++|++.++. +++++|++||+++++|.+.++++|+++|+++|++||++||+||+|+|| ++|.++..+++++.||+
T Consensus 165 ~d~~~le~~l~~--~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~~~~~~~~~~pd~ 242 (400)
T PTZ00125 165 NDVEALEKLLQD--PNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKLLAHDHEGVKPDI 242 (400)
T ss_pred CCHHHHHHHhCC--CCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhHHHhcCCCCCE
Confidence 999999999972 479999999999999999999999999999999999999999999999 88877777788999999
Q ss_pred hhhhhhcCCCC-cEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHh
Q 011856 310 TTLGKIIGGGL-PVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAG 388 (476)
Q Consensus 310 ~t~sK~lg~G~-~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~ 388 (476)
+++||++++|+ |+|++++++++++.+.. ..+..|++++|+.++++.++|+.++++++.+++++++++++++|+++.
T Consensus 243 ~~~sK~l~~g~~~ig~v~~~~~~~~~~~~---~~~~~t~~~~~~~~~aa~~~l~~i~~~~~~~~~~~~~~~l~~~l~~l~ 319 (400)
T PTZ00125 243 VLLGKALSGGLYPISAVLANDDVMLVIKP---GEHGSTYGGNPLACAVAVEALEVLKEEKLAENAQRLGEVFRDGLKELL 319 (400)
T ss_pred EEEcccccCCCcCcEEEEEcHHHHhhccC---CCCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999875 99999999999998763 335678899999999999999998877899999999999999999886
Q ss_pred hhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCCcceEEe--CCCcHHHHHHHHHH
Q 011856 389 KKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFTS--LAHSSDDIQHTITA 466 (476)
Q Consensus 389 ~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~~--~~~t~e~i~~~~~~ 466 (476)
..++.+..+++.|.++++++..+ +......+.+.|+++||++.|.+.+.+|++ +.++++++++++++
T Consensus 320 ~~~~~~~~~~~~g~~~~v~~~~~-----------~~~~~~~~~~~l~~~Gv~v~~~~~~~lRi~~~~~~~~~~i~~~l~~ 388 (400)
T PTZ00125 320 KKSPWVKEIRGKGLLNAIVFDHS-----------DGVNAWDLCLKLKENGLLAKPTHDNIIRFAPPLVITKEQLDQALEI 388 (400)
T ss_pred hcCCCeEEEecccEEEEEEEccC-----------cchHHHHHHHHHHHCCeEEeecCCCEEEEECCccCCHHHHHHHHHH
Confidence 66677777888999999988531 112346788999999999998876778885 77999999999999
Q ss_pred HHHHHHHh
Q 011856 467 AEKVKMRF 474 (476)
Q Consensus 467 l~~~~~~~ 474 (476)
|++++.++
T Consensus 389 l~~~l~~~ 396 (400)
T PTZ00125 389 IKKVLKSF 396 (400)
T ss_pred HHHHHHHH
Confidence 99998865
No 84
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=1.3e-52 Score=417.77 Aligned_cols=360 Identities=27% Similarity=0.349 Sum_probs=303.5
Q ss_pred CCeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcCC--CCCCCHHHHHHHHHHHhhCCCCCeE
Q 011856 81 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTS--FGAPCLLENVLAEMVISAVPSIEMV 158 (476)
Q Consensus 81 ~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~--~~~~~~~~~~la~~l~~~~~~~e~v 158 (476)
.|+++.+++|+|+||.||++||||.++++..++|| ||+|.+|+.+++++... ..+..+.+.++++.+... ....+
T Consensus 11 ~~~~~~~~~G~~l~d~dg~~~lD~~s~~~~~~lG~-~p~v~~a~~~~~~~~~~~~~~~~~~~~~~la~~l~~~--~~~~~ 87 (375)
T PRK04260 11 AAIEFVKAEGNYLIDTDGKKYLDFSSGIGVTNLGF-HPQVQQALQKQAGLIWHSPNLYLNSLQEEVAQKLIGD--KDYLA 87 (375)
T ss_pred CCceEEEeeeCEEEeCCCCEEEECCCCcccccCCC-CHHHHHHHHHHHHhcCcccCccCCHHHHHHHHHHhcC--cCCEE
Confidence 47899999999999999999999999998899999 99999999999987422 223567777888777542 12367
Q ss_pred EEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHH
Q 011856 159 RFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALEN 238 (476)
Q Consensus 159 ~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~ 238 (476)
+|++||+||++.|++++|.++++++|+.++++|||++...+..++.......+ ...+ ..+..++++|++++++
T Consensus 88 ~~~~SGseA~~~Al~~ar~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~--~~~~-----~~~~~~~~~dl~~l~~ 160 (375)
T PRK04260 88 FFCNSGAEANEAAIKIARKATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGF--GDGV-----PHFSYAIFNDLNSVKA 160 (375)
T ss_pred EEcCccHHHHHHHHHHHHHhcCCCeEEEECCCcCcccHHHHhccCCcccCCCC--CCCC-----CCeEEeCCCCHHHHHH
Confidence 99999999999999999999999999999999999998888776643221111 1111 1233346789999999
Q ss_pred HHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccchhhccCCCCchhhhhhhcC
Q 011856 239 LFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIG 317 (476)
Q Consensus 239 ~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pDi~t~sK~lg 317 (476)
.+++ ++++|++||+++++|.+.++++||++|+++|++||+++|+||+|+|| ++|.++.++.+++.||++||||+++
T Consensus 161 ~l~~---~~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~~~~~~~~~pdi~t~sK~l~ 237 (375)
T PRK04260 161 LVNK---NTAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLYAFEHYGIEPDIFTLAKGLA 237 (375)
T ss_pred hcCC---CeEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhHhhCCCCCEEEeccccc
Confidence 8853 68999999999999999999999999999999999999999999999 8877767778899999999999999
Q ss_pred CCCcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCceEe
Q 011856 318 GGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICG 397 (476)
Q Consensus 318 ~G~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v 397 (476)
+|+|+|++++++++++.+.. ..+.+|+++||++++++.++|+.++.+++.++++++++++++.|.++..+++.+..+
T Consensus 238 ~G~~ig~~~~~~~~~~~~~~---~~~~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 314 (375)
T PRK04260 238 NGVPVGAMLAKSSLGGAFGY---GSHGSTFGGNKLSMAAASATLDIMLTAGFLEQALENGNYLQEQLQKALQDKETVTTV 314 (375)
T ss_pred CCcceEEEEEcHHHHhhcCC---CCCCCCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCeeEE
Confidence 99999999999999988863 346779999999999999999998878899999999999999999988777767788
Q ss_pred eeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCCcceEE--eCCCcHHHHHHHHHHHHHHH
Q 011856 398 GYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAEKVK 471 (476)
Q Consensus 398 ~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~--~~~~t~e~i~~~~~~l~~~~ 471 (476)
++.|+++++++... ..++.+.|+++||++.+.+...+|+ ++.++++|+++++++|++++
T Consensus 315 ~~~g~~~~~~~~~~---------------~~~~~~~l~~~Gi~v~~~~~~~lR~~~~~~~t~~~i~~~l~~l~~~~ 375 (375)
T PRK04260 315 RGLGYMIGIETTAD---------------LSQLVEAARDKGLIVLTAGTNVIRLLPPLTLTKEEIEQGIAILSEVF 375 (375)
T ss_pred eccceEEEEEecCc---------------HHHHHHHHHhCCCEEecCCCCEEEEcCCCccCHHHHHHHHHHHHHhC
Confidence 88999999998321 2578899999999998876566776 57889999999999998763
No 85
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=100.00 E-value=2.8e-48 Score=388.11 Aligned_cols=362 Identities=30% Similarity=0.429 Sum_probs=301.3
Q ss_pred CCCeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcC--CCCCCCHHHHHHHHHHHhhCCCCCe
Q 011856 80 GQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT--SFGAPCLLENVLAEMVISAVPSIEM 157 (476)
Q Consensus 80 ~~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~--~~~~~~~~~~~la~~l~~~~~~~e~ 157 (476)
++|+++++++|+++||.||++||||.++++++++||++|.|.+++.+++++.. ...++.+...+|++++++++ +.++
T Consensus 8 ~~~~~~~~~~g~~~~~~~g~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~-g~~~ 86 (379)
T TIGR00707 8 RLPVKIVRGKGAYVYDVNGKEYLDFVAGIAVNSLGHAHPKLVEALKEQLEKLVHVSNLYYTEPQEELAEKLVEHS-GADR 86 (379)
T ss_pred CCCccEEEeecCEEEeCCCCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhhC-CCCE
Confidence 35899999999999999999999999999999999999999999999998742 22357888999999999999 5679
Q ss_pred EEEeCCHHHHHHHHHHHHHhccC-----CceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCC
Q 011856 158 VRFVNSGTEACMGVLRLARAFTG-----RERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFND 232 (476)
Q Consensus 158 v~~~~sGseA~~~al~~ar~~~~-----~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 232 (476)
+++++||++|++.++++++.+++ +++|++++++|||+...+...++...... ... ....+...+++||
T Consensus 87 ~~~~~sg~~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~-----~~~--~~~~~~~~~~~~d 159 (379)
T TIGR00707 87 VFFCNSGAEANEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQK-----GFE--PLVPGFSYAPYND 159 (379)
T ss_pred EEEeCCcHHHHHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhhc-----cCC--CCCCCceeeCCCC
Confidence 99999999999999998877665 68999999999999888877665432110 000 1112345667889
Q ss_pred HHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccchhhccCCCCchhh
Q 011856 233 VSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTT 311 (476)
Q Consensus 233 ~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pDi~t 311 (476)
++++++.+++ ++++|+++|+++++|...++.+++++|.++|++||+++|+||+|+|| +.|..+....+++.||++|
T Consensus 160 ~~~l~~~~~~---~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~~~~~~~~~~~~d~~t 236 (379)
T TIGR00707 160 IESLKKAIDD---ETAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGKFFAYEHYGIEPDIIT 236 (379)
T ss_pred HHHHHHHhhh---CeeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhhHHhcCCCCCEEE
Confidence 9999999864 57899999999989987778889999999999999999999999999 7765555566788999999
Q ss_pred hhhhcCCCCcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhc
Q 011856 312 LGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKA 391 (476)
Q Consensus 312 ~sK~lg~G~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 391 (476)
|||++++|+|+||+++++++++.+.. ..+..+++.|+++++++.++|+.++.+++.+++++++++++++|+++....
T Consensus 237 ~sK~~~~G~riG~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~aa~aaL~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 313 (379)
T TIGR00707 237 LAKGLGGGVPIGATLAKEEVAEAFTP---GDHGSTFGGNPLACAAALAVLEVIEKERLLENVKEKGDYFKERLEELGKNY 313 (379)
T ss_pred EcccccCCcccEEEEEcHHHHhhhcC---CCCCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhC
Confidence 99999999999999999999998873 334567888999999999999988777899999999999999999876555
Q ss_pred CCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCCcceEEe--CCCcHHHHHHHHHHHHH
Q 011856 392 GHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFTS--LAHSSDDIQHTITAAEK 469 (476)
Q Consensus 392 ~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~~--~~~t~e~i~~~~~~l~~ 469 (476)
+. ..+++.|.++++.+..+ ..++.+.|.++||++.+.+.+.+|++ +.+|++++++++++|++
T Consensus 314 ~~-~~~~~~g~~~~~~~~~~---------------~~~~~~~l~~~Gv~v~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~ 377 (379)
T TIGR00707 314 PN-KEVRGKGLMLGIELEAP---------------CKDIVKKALEKGLLVNCAGPKVLRFLPPLIITKEEIDEAVSALEE 377 (379)
T ss_pred CC-CccccCceEEEEEecCc---------------HHHHHHHHHHCCcEEeeCCCCEEEEECCCcCCHHHHHHHHHHHHH
Confidence 43 34556788888887421 25788889999999999776678885 57899999999999987
Q ss_pred HH
Q 011856 470 VK 471 (476)
Q Consensus 470 ~~ 471 (476)
++
T Consensus 378 ~~ 379 (379)
T TIGR00707 378 AI 379 (379)
T ss_pred hC
Confidence 63
No 86
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.8e-44 Score=326.93 Aligned_cols=394 Identities=20% Similarity=0.230 Sum_probs=313.4
Q ss_pred ccCChhHHHHHHHHhhhCCCCCCCccccccccCCCCeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHH
Q 011856 47 NFTLKKSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGE 126 (476)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~ 126 (476)
..++++|+++.++..++... +.+++| .-.++.-|.|++|+|||.+||..+.+++.++|++||.+++++..
T Consensus 34 sIPGPks~~l~kel~~v~~t---~~v~F~-------~dYEkS~GNYlvDvDGN~lLDvYsQIsSvplGYn~P~LvK~a~~ 103 (484)
T KOG1405|consen 34 SIPGPKSQELKKELDKVQDT---EAVHFF-------VDYEKSIGNYLVDVDGNRLLDVYSQISSVPLGYNNPALVKAAQQ 103 (484)
T ss_pred cCCCchhHHHHHHHhHhhcc---cceEEe-------hhhhhhcCceEEecCCCeeehhhhhhcccccCCCCHHHHHHhcC
Confidence 56689999999999888765 334433 33458899999999999999999999999999999999988653
Q ss_pred -HHHh-cCC---CC-C-CCHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHHHhc--------------------
Q 011856 127 -TMKK-GTS---FG-A-PCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAF-------------------- 178 (476)
Q Consensus 127 -~l~~-~~~---~~-~-~~~~~~~la~~l~~~~~-~~e~v~~~~sGseA~~~al~~ar~~-------------------- 178 (476)
++.+ ... .+ + +.++.+.|.+.+.+..| +.++|++.-+|+.||+.|++.+..+
T Consensus 104 p~~~~~lvnRPALg~fP~kd~~~~l~~~ll~~APKG~~~v~tm~cGs~aNEnA~K~afiwy~~k~rg~~~~s~~e~eScm 183 (484)
T KOG1405|consen 104 PQNATMLVNRPALGNFPPKDFAEKLRQSLLSIAPKGQKQVITMLCGSCANENAYKTAFIWYRAKERGQAGFSAEELESCM 183 (484)
T ss_pred hHHHHHHhccccccCCChhhHHHHHHHHHHhhCcchHHHHHHHhccccccHHHHHHHHHHHHhhcCCCCCCCHHHHHHHH
Confidence 2211 111 11 2 34555566666777777 7889999999999999999987432
Q ss_pred ------cCCceEEEEeCCCCCCchhHHhhcCCCC-ccCCCCCCCCCCCCCCCceeeccC------C------CHHHHHHH
Q 011856 179 ------TGRERIIKFEGCYHGHADPFLVKAGSGV-ATLGLPDSPGVPKGATYETLTAPF------N------DVSALENL 239 (476)
Q Consensus 179 ------~~~~~ii~~~~~yhg~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~------~------d~~~le~~ 239 (476)
++.--|+.|.++|||.+.+.++.+.+.. ..+.+|.++.-.... +.+.+|. | .++.+|++
T Consensus 184 ~n~aPg~P~lsvlsF~gaFHGR~~g~lstT~SKpIHKldiPaFdWPiA~f--P~ykYPLdenv~~N~ked~~Cl~~Ve~l 261 (484)
T KOG1405|consen 184 INQAPGAPDLSVLSFKGAFHGRTFGSLSTTHSKPIHKLDIPAFDWPIAPF--PRYKYPLDENVAENKKEDQGCLAEVEDL 261 (484)
T ss_pred hcCCCCCCceeeeeeccccccccccccccccCccccccCCCCCCCCCCCC--ccccCChhhhhhhhhhhhhhHHHHHHHH
Confidence 0123589999999999999999887654 445555443321111 1233332 2 37889999
Q ss_pred HhcCC---CCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccchhhccCCC--Cchhhhh
Q 011856 240 FENNK---GEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVT--PDLTTLG 313 (476)
Q Consensus 240 l~~~~---~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~--pDi~t~s 313 (476)
|.++. ..++++|+||+|++||+...+++|+++|+++|+|||+.+|+||||||- .+|..|+++|+++. ||++|||
T Consensus 262 i~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~PpD~vTFS 341 (484)
T KOG1405|consen 262 IVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDSPPDVVTFS 341 (484)
T ss_pred HHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCCCccceehh
Confidence 98754 478999999999999999999999999999999999999999999999 89999999999984 7999999
Q ss_pred hhcCCCCcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcC-
Q 011856 314 KIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAG- 392 (476)
Q Consensus 314 K~lg~G~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~- 392 (476)
|-|-. .|++. .+ .+++..++.+++||.+.|.-+....++++.++++++.++++..+++|.++|.++..++|
T Consensus 342 KK~q~---gGffh-~~----~frpn~pYrifNTWmGdP~k~lll~~vv~~I~~~~Ll~n~~~vG~~l~~gL~~Lq~~~p~ 413 (484)
T KOG1405|consen 342 KKFQT---GGFFH-DE----EFRPNEPYRIFNTWMGDPSKNLLLEEVVQEIKREDLLNNVAHVGKALLKGLLELQAKYPG 413 (484)
T ss_pred hhhhc---Ccccc-Cc----ccCCCchHHHhhhhcCChHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhCch
Confidence 98873 22332 22 24444567789999999999999999999999999999999999999999999998887
Q ss_pred CceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCCcceEE--eCCCcHHHHHHHHHHHHHH
Q 011856 393 HAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAEKV 470 (476)
Q Consensus 393 ~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~--~~~~t~e~i~~~~~~l~~~ 470 (476)
.+..+||.|.|+.+++.++ ...+.+...++-+|+.+..++...+|+ ++..++.+.+-++++|++.
T Consensus 414 ~~~~~RGrGTF~a~d~ps~-------------~~Rdk~i~~~~~nGv~~GGCg~~siRfRPsLvf~~~Ha~i~l~~~~k~ 480 (484)
T KOG1405|consen 414 KINNLRGRGTFIAWDCPSG-------------SIRDKLILIARLNGVNLGGCGDKSIRFRPSLVFRKHHADIFLDIFDKI 480 (484)
T ss_pred hhhcccccceEEEEeCCCh-------------HHHHHHHHHHHHcCceecccccceeeeccceeehhhhHHHHHHHHHHH
Confidence 5667899999999998543 344688899999999999988777665 7899999999999999998
Q ss_pred HHH
Q 011856 471 KMR 473 (476)
Q Consensus 471 ~~~ 473 (476)
++.
T Consensus 481 l~~ 483 (484)
T KOG1405|consen 481 LAG 483 (484)
T ss_pred hcc
Confidence 864
No 87
>PLN02822 serine palmitoyltransferase
Probab=100.00 E-value=5.2e-39 Score=326.84 Aligned_cols=377 Identities=20% Similarity=0.296 Sum_probs=288.2
Q ss_pred hHHHHHHHHhhhCCCCCCCccccccccCCCCeEEEeecCCEEEEcCCCEEEecccChhhccCCC-CcHHHHHHHHHHHHh
Q 011856 52 KSEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGH-ADDQVLAALGETMKK 130 (476)
Q Consensus 52 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~-~~p~v~~a~~~~l~~ 130 (476)
+.+|..+..++|.|...-.+...... ...+++.+++|+++| +||++||||.++ +++|. +||+|++++.+++++
T Consensus 65 ~~~~~~~l~~~~~p~~l~~~~~~~~~--~~~~~~~~~~G~~i~-~~G~~~id~~s~---~~lgl~~~~~i~ea~~~al~~ 138 (481)
T PLN02822 65 TEKEIDELCDEWTPEPLIPPITEEMR--PEPPVLESAAGPHTI-INGKDVVNFASA---NYLGLIGNEKIKESCTSALEK 138 (481)
T ss_pred CHHHHHHHHhcCCCCCCCCCCchhcc--ccCCceecCCCCeEE-ECCceEEEeECC---CcCCCCCCHHHHHHHHHHHHH
Confidence 45778888999999977654332222 124588899999999 899999999998 77787 699999999999998
Q ss_pred -cCC------CCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcC
Q 011856 131 -GTS------FGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAG 203 (476)
Q Consensus 131 -~~~------~~~~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g 203 (476)
+.. ++++.+...+|+++|+++++..+.++|++|++ ++..+++ ++++++++|++++.||+.....+...+
T Consensus 139 ~G~g~~g~r~~yg~~~~~~~Lee~La~~~~~~~~i~~s~G~~-a~~sai~---a~~~~gd~Ii~d~~~H~s~~~~~~ls~ 214 (481)
T PLN02822 139 YGVGSCGPRGFYGTIDVHLDCETKIAKFLGTPDSILYSYGLS-TIFSVIP---AFCKKGDIIVADEGVHWGIQNGLYLSR 214 (481)
T ss_pred hCCCCcccCccccCHHHHHHHHHHHHHHhCCCCEEEECCHHH-HHHHHHH---HhCCCCCEEEEeCCccHHHHHHHHHcC
Confidence 432 33567889999999999998777888876555 7888888 778888999999999987655554433
Q ss_pred CCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCC------CCe-EEEEEcccCCCCCcccCCHHHHHHHHHHH
Q 011856 204 SGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK------GEI-AAIILEPVVGNSGFIAPKPDFLNAIRRIT 276 (476)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~------~~~-a~vi~ep~~~~~G~i~~~~~~l~~l~~l~ 276 (476)
. +++.++|||.++++..+++.. +++ ++|++|++++++|.+.| |++|+++|
T Consensus 215 ~-------------------~~~~~~~nd~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G~i~~----L~~i~~l~ 271 (481)
T PLN02822 215 S-------------------TIVYFKHNDMESLRNTLEKLTAENKRKKKLRRYIVVEAIYQNSGQIAP----LDEIVRLK 271 (481)
T ss_pred C-------------------eEEEECCCCHHHHHHHHHHHhhhhcccCCCcEEEEEecCCCCCCCccC----HHHHHHHH
Confidence 2 467789999999988886421 234 89999999999999999 99999999
Q ss_pred HHhCCEEEEecccc-Cc--cccccchhhccCC---CCchhh--hhhhcCCCCcEEEEEecHHHHHhhcCCCCccccCCCC
Q 011856 277 KENGALLIFDEVMT-GF--RLAYGGAQEYFGV---TPDLTT--LGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLS 348 (476)
Q Consensus 277 ~~~g~llI~DEv~~-g~--r~g~~~~~~~~g~---~pDi~t--~sK~lg~G~~iG~~~~~~~i~~~l~~~~~~~~~~t~~ 348 (476)
++||++||+||+|+ |. ++| .+..+++++ .+|+++ |||++|. ..|++++++++++.++. ..+..+|+
T Consensus 272 ~k~~~~LIvDEa~s~gvlG~~G-~G~~e~~~v~~~~~dii~~s~sKalg~--~GG~i~g~~~ii~~~~~---~~~~~~fs 345 (481)
T PLN02822 272 EKYRFRVLLDESNSFGVLGKSG-RGLSEHFGVPIEKIDIITAAMGHALAT--EGGFCTGSARVVDHQRL---SSSGYVFS 345 (481)
T ss_pred HHcCCEEEEECCccccccCCCC-CChHHHcCCCCCCCeEEEecchhhhhh--CCeEEEcCHHHHHHHHh---cCCceeec
Confidence 99999999999996 32 344 346788988 678875 8899982 23889999999998873 23445666
Q ss_pred Cc--HHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchH
Q 011856 349 GN--PLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETT 425 (476)
Q Consensus 349 ~~--~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~ 425 (476)
++ |..++|++++|+.+++ ++++++++++++++++.|++.. ++.....+.+.++.+.+.+.. .. ...+..
T Consensus 346 a~lPp~~~~Aa~~aL~~l~~~~~~~~~l~~~~~~l~~~L~~~~---g~~~~~~~~spi~~l~l~~~~-~~----~~~~~~ 417 (481)
T PLN02822 346 ASLPPYLASAAITAIDVLEDNPSVLAKLKENIALLHKGLSDIP---GLSIGSNTLSPIVFLHLEKST-GS----AKEDLS 417 (481)
T ss_pred cccCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcC---CcccCCCCCCCEEEEEeCCCc-cc----ccchHH
Confidence 55 8889999999998876 6789999999999999998752 222222345677777774310 00 001223
Q ss_pred HHHHHHHHHH-HCCeEeccCCC---------cceEE--eCCCcHHHHHHHHHHHHHHHHHhh
Q 011856 426 KFARFYRGML-EEGVYFAPSQF---------EAGFT--SLAHSSDDIQHTITAAEKVKMRFL 475 (476)
Q Consensus 426 ~~~~~~~~l~-~~Gv~~~~~~~---------~~~~~--~~~~t~e~i~~~~~~l~~~~~~~~ 475 (476)
...++++.|+ ++||++.+..+ +.+|+ +..+|++||++++++|++++.+++
T Consensus 418 ~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~~~t~edI~~~~~~l~~~~~~~~ 479 (481)
T PLN02822 418 LLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSAGHTESDILKASESLKRVAASVL 479 (481)
T ss_pred HHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECCCCCHHHHHHHHHHHHHHHHHHh
Confidence 4568899998 88999997532 23565 577999999999999999998765
No 88
>PRK07505 hypothetical protein; Provisional
Probab=100.00 E-value=3.6e-37 Score=309.42 Aligned_cols=342 Identities=18% Similarity=0.239 Sum_probs=245.3
Q ss_pred CCeEEEeecCCEEEEcCCCEEEecccChhhccCC-CCcHHHHHHHHHHHHh-c-CCCC-----CCCHHHHHHHHHHHhhC
Q 011856 81 QPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIG-HADDQVLAALGETMKK-G-TSFG-----APCLLENVLAEMVISAV 152 (476)
Q Consensus 81 ~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG-~~~p~v~~a~~~~l~~-~-~~~~-----~~~~~~~~la~~l~~~~ 152 (476)
.++++.+++|+++||.||++||||.++ +++| |+||+|++|+.+++++ + ..++ ...+...+++++|++++
T Consensus 28 ~~~~~~~~~G~~~~d~~g~~~ld~~s~---~~lgl~~~p~v~~A~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~la~~~ 104 (402)
T PRK07505 28 NGLTVGEREGILITLADGHTFVNFVSC---SYLGLDTHPAIIEGAVDALKRTGSLHLSSSRTRVRSQILKDLEEALSELF 104 (402)
T ss_pred ccceeeccCCccEEecCCceEEEeecC---CccCCCCCHHHHHHHHHHHHHhCCCCCCccchhhhhHHHHHHHHHHHHHh
Confidence 467899999999999999999999986 8999 9999999999999987 3 1221 23567889999999998
Q ss_pred CCCCeEEEeCCHHHHHHHHHHHHHh--cc-CCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeecc
Q 011856 153 PSIEMVRFVNSGTEACMGVLRLARA--FT-GRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAP 229 (476)
Q Consensus 153 ~~~e~v~~~~sGseA~~~al~~ar~--~~-~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (476)
+. ++++++||++|++.++++++. ++ ++.++|+++++||+...... + ... ...++..+|
T Consensus 105 ~~--~~~~~~sG~~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~---~-------------~~~-~~~~v~~~~ 165 (402)
T PRK07505 105 GA--SVLTFTSCSAAHLGILPLLASGHLTGGVPPHMVFDKNAHASLNILK---G-------------ICA-DETEVETID 165 (402)
T ss_pred CC--CEEEECChHHHHHHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhh---h-------------hhh-cCCeEEEeC
Confidence 54 778888999999999998653 23 56679999999998431110 0 000 012577889
Q ss_pred CCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccc--cCc-cccccchhhccCC-
Q 011856 230 FNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM--TGF-RLAYGGAQEYFGV- 305 (476)
Q Consensus 230 ~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~--~g~-r~g~~~~~~~~g~- 305 (476)
++|+++|+++++.. ..+++++||++++ |.+.+ +++|+++|++||++||+||+| ++| ++|.++..++++.
T Consensus 166 ~~d~~~l~~~~~~~--~~~~vl~~p~~~~-G~~~~----~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~ 238 (402)
T PRK07505 166 HNDLDALEDICKTN--KTVAYVADGVYSM-GGIAP----VKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYR 238 (402)
T ss_pred CCCHHHHHHHHhcC--CCEEEEEeccccc-CCcCC----HHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCC
Confidence 99999999998643 5788999999876 55666 899999999999999999999 567 7777666677887
Q ss_pred CCchh----hhhhhcCCCCcEEEEE-ecHHHHHhhcCCCCccccCCCC--CcHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Q 011856 306 TPDLT----TLGKIIGGGLPVGAYG-GRRDIMEMVAPAGPMYQAGTLS--GNPLAMTAGIHTLKRLKEPGTYEYLNKITG 378 (476)
Q Consensus 306 ~pDi~----t~sK~lg~G~~iG~~~-~~~~i~~~l~~~~~~~~~~t~~--~~~~~~aaa~aal~~~~~~~~~~~~~~~~~ 378 (476)
.||.+ |+||+++++ .|+++ .++++++.+.. ..+..||+ .+++++++++++++.+.++.+.+. .+
T Consensus 239 ~~d~~i~~~s~sK~~~~~--Gg~~~~~~~~~~~~~~~---~~~~~t~~~~~~~~a~aa~~a~l~~~~~~~~~~~----~~ 309 (402)
T PRK07505 239 LNERTIIAASLGKAFGAS--GGVIMLGDAEQIELILR---YAGPLAFSQSLNVAALGAILASAEIHLSEELDQL----QQ 309 (402)
T ss_pred CCCCeEEEEechhhhhcc--CeEEEeCCHHHHHHHHH---hCCCceeCCCCCHHHHHHHHHHHHHHhccCcHHH----HH
Confidence 67754 799999853 47765 47888888763 22333444 456899999999987655444332 23
Q ss_pred HHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCC-------cceEE
Q 011856 379 ELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-------EAGFT 451 (476)
Q Consensus 379 ~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~-------~~~~~ 451 (476)
++++.+..+.. . ....+++.+.++.+.... +.....++.+.|+++||++.+..+ ..+|+
T Consensus 310 ~l~~~~~~~~~-~-~~~~~~g~~~~i~~~~~~------------~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~lRi 375 (402)
T PRK07505 310 KLQNNIALFDS-L-IPTEQSGSFLPIRLIYIG------------DEDTAIKAAKQLLDRGFYTSPVFFPVVAKGRAGLRI 375 (402)
T ss_pred HHHHHHHHHHH-H-HHhcCCCCCCCEEEEEeC------------CHHHHHHHHHHHHHCCCeEeeecCCCCCCCCceEEE
Confidence 33333322211 0 011224445444322211 112346788999999999987531 34666
Q ss_pred --eCCCcHHHHHHHHHHHHHHHHHh
Q 011856 452 --SLAHSSDDIQHTITAAEKVKMRF 474 (476)
Q Consensus 452 --~~~~t~e~i~~~~~~l~~~~~~~ 474 (476)
++.+|++|+++++++|++++++-
T Consensus 376 ~~~~~~t~eei~~~~~~l~~~l~~~ 400 (402)
T PRK07505 376 MFRASHTNDEIKRLCSLLKEILDEG 400 (402)
T ss_pred ecCccCCHHHHHHHHHHHHHHHHhh
Confidence 45689999999999999998764
No 89
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=100.00 E-value=2.2e-36 Score=292.63 Aligned_cols=332 Identities=23% Similarity=0.313 Sum_probs=268.6
Q ss_pred eecCCEEEEcCCCEEEecccChhhccCCC-CcHHHHHHHHHHHHh-cCCC------CCCCHHHHHHHHHHHhhCCCCCeE
Q 011856 87 SVKGSHMWDIDGNEYIDYVGSWGPAIIGH-ADDQVLAALGETMKK-GTSF------GAPCLLENVLAEMVISAVPSIEMV 158 (476)
Q Consensus 87 ~~~G~~~~d~dG~~~iD~~~~~~~~~lG~-~~p~v~~a~~~~l~~-~~~~------~~~~~~~~~la~~l~~~~~~~e~v 158 (476)
+..+..++ .+|++++||++| +|||. +||++++++.+++++ +... .++.+...+|.++|++++ +.|.+
T Consensus 28 ~~~~~~~~-~~~~~~~nf~SN---dYLGLa~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~-g~e~a 102 (388)
T COG0156 28 RRQGLAIR-ADGRKVLNFCSN---DYLGLASHPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFL-GAEAA 102 (388)
T ss_pred ccCCccee-cCCceeEeeecc---CcccccCCHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHh-CCCcE
Confidence 33355555 669999999999 99999 699999999999998 4322 346788889999999988 88899
Q ss_pred EEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHH
Q 011856 159 RFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALEN 238 (476)
Q Consensus 159 ~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~ 238 (476)
++.+||..||..++. ++.+++++|+.|.-.|.+....+.+++ .+++.++|||+++||+
T Consensus 103 l~f~SGy~AN~~~i~---~l~~~~dli~~D~lnHASiidG~rls~-------------------a~~~~f~HnD~~~Le~ 160 (388)
T COG0156 103 LLFSSGFVANLGLLS---ALLKKGDLIFSDELNHASIIDGIRLSR-------------------AEVRRFKHNDLDHLEA 160 (388)
T ss_pred EEEcccchhHHHHHH---HhcCCCcEEEEechhhhhHHHHHHhCC-------------------CcEEEecCCCHHHHHH
Confidence 999999999999999 788889999999999997655554433 3578899999999999
Q ss_pred HHhcCC---CCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccc-cCc-cccccchhhccCCCCc---hh
Q 011856 239 LFENNK---GEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM-TGF-RLAYGGAQEYFGVTPD---LT 310 (476)
Q Consensus 239 ~l~~~~---~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~-~g~-r~g~~~~~~~~g~~pD---i~ 310 (476)
.++++. .+.+.|++|.+++|.|++.| |++|.+||++||++|++||+| .|+ ...+.+..+++|+.++ |+
T Consensus 161 ~l~~~~~~~~~~~~IvtegVfSMdGdiAp----L~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~ 236 (388)
T COG0156 161 LLEEARENGARRKLIVTEGVFSMDGDIAP----LPELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDII 236 (388)
T ss_pred HHHhhhccCCCceEEEEeccccCCCCcCC----HHHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEE
Confidence 998632 14689999999999999999 999999999999999999999 688 6555677788888754 33
Q ss_pred --hhhhhcCCCCcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHH
Q 011856 311 --TLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDA 387 (476)
Q Consensus 311 --t~sK~lg~G~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~ 387 (476)
||||+||+ -.|++.+++.+++.+.+..+.+.++| +.+|..++++.++|+.+++ ++.+++++++..++++.+...
T Consensus 237 ~gTlsKAlGs--~Gg~v~g~~~~~d~L~~~ar~~ifSt-alpP~~aaa~~~al~~l~~~~~~r~~L~~~~~~~~~~~~~~ 313 (388)
T COG0156 237 VGTLGKALGS--SGGYIAGSAALIDYLRNRARPFIFST-ALPPAVAAAALAALRILEEGPERRERLQELAAFFRSLLKAL 313 (388)
T ss_pred EEEchhhhcc--cCceeeCcHHHHHHHHHhCCceeccC-CCCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc
Confidence 89999995 25677899999999988777788877 7789999999999999987 789999999999999666554
Q ss_pred hhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCCcc-------eEE--eCCCcHH
Q 011856 388 GKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEA-------GFT--SLAHSSD 458 (476)
Q Consensus 388 ~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~-------~~~--~~~~t~e 458 (476)
.... .+....++.+.+. +...+.++...|+++||++.+..+|. +|+ +..||++
T Consensus 314 ~~~~-----~~s~s~I~pv~~g-------------d~~~a~~~s~~l~~~Gi~v~~i~~PTVp~gtarlRi~lta~ht~~ 375 (388)
T COG0156 314 GLVL-----LPSESPIIPVILG-------------DEERALEASRALLEEGIYVSAIRPPTVPKGTARLRITLTAAHTEE 375 (388)
T ss_pred CCcc-----CCCCCCeeeeEeC-------------CHHHHHHHHHHHHHCCeeEeeecCCCCCCCcceEEEEecCCCCHH
Confidence 2211 1233344455553 44567788999999999998876554 344 6899999
Q ss_pred HHHHHHHHHHHH
Q 011856 459 DIQHTITAAEKV 470 (476)
Q Consensus 459 ~i~~~~~~l~~~ 470 (476)
||+.++++|.++
T Consensus 376 ~I~~l~~~l~~~ 387 (388)
T COG0156 376 DIDRLAEALSEV 387 (388)
T ss_pred HHHHHHHHHHhh
Confidence 999999999875
No 90
>PLN02955 8-amino-7-oxononanoate synthase
Probab=100.00 E-value=4.8e-35 Score=289.62 Aligned_cols=327 Identities=17% Similarity=0.165 Sum_probs=255.3
Q ss_pred CCCEEEecccChhhccCCC-CcHHHHHHHHHHHHh-cCCC------CCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHH
Q 011856 97 DGNEYIDYVGSWGPAIIGH-ADDQVLAALGETMKK-GTSF------GAPCLLENVLAEMVISAVPSIEMVRFVNSGTEAC 168 (476)
Q Consensus 97 dG~~~iD~~~~~~~~~lG~-~~p~v~~a~~~~l~~-~~~~------~~~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~ 168 (476)
.+++++||+++ +|||. +||++++++.+.+++ |++. .+......+|.++|++++ +.|.+++++||+.||
T Consensus 100 ~~r~~l~FsSn---dYLGL~~~p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~-g~e~all~sSGy~AN 175 (476)
T PLN02955 100 RFKKLLLFSGN---DYLGLSSHPTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLK-KKEDCLVCPTGFAAN 175 (476)
T ss_pred CCceEEEeecc---CccCCCCCHHHHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHH-CCCcEEEECChHHHH
Confidence 45799999999 99999 699999999999988 4332 235677788888888888 789999999999999
Q ss_pred HHHHHHHHh-----------ccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHH
Q 011856 169 MGVLRLARA-----------FTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALE 237 (476)
Q Consensus 169 ~~al~~ar~-----------~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le 237 (476)
..++...-. ..+++.+|+.|...|.+....+.+... ....+++.++|||+++|+
T Consensus 176 ~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~---------------~~~a~~~~f~HND~~~Le 240 (476)
T PLN02955 176 MAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAER---------------QGNVEVFVYRHCDMYHLN 240 (476)
T ss_pred HHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhccc---------------cCCceEEEeCCCCHHHHH
Confidence 999984310 135677888899999876655544321 001247789999999999
Q ss_pred HHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc--cccccchhhccCCCCch----hh
Q 011856 238 NLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF--RLAYGGAQEYFGVTPDL----TT 311 (476)
Q Consensus 238 ~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~--r~g~~~~~~~~g~~pDi----~t 311 (476)
++++++.++.+.|++|+++++.|.+.| |++|.++|++||++||+||+|+.+ .....+..+++|+.+|+ .|
T Consensus 241 ~~L~~~~~~~~~Vv~EgV~SmdGdiap----L~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~~di~ii~~T 316 (476)
T PLN02955 241 SLLSSCKMKRKVVVTDSLFSMDGDFAP----MEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCEADVDLCVGT 316 (476)
T ss_pred HHHHhCCCCceEEEEeCCCCCCCCcCC----HHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhCCCCCCcEEEEe
Confidence 999876666789999999999999999 999999999999999999999644 44346778899987776 48
Q ss_pred hhhhcCCCCcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHhhh
Q 011856 312 LGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKK 390 (476)
Q Consensus 312 ~sK~lg~G~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~ 390 (476)
|||++|. +.|++++++++++.++..++.++++| +.+|..+++++++++.+.+ +..+++++++.+++++.+
T Consensus 317 LsKA~G~--~GGfi~gs~~~~~~l~~~~~~~ifSt-alpp~~aaa~laal~l~~~~~~~r~~L~~n~~~fr~~~------ 387 (476)
T PLN02955 317 LSKAAGC--HGGFIACSKKWKQLIQSRGRSFIFST-AIPVPMAAAAYAAVVVARKEKWRRKAIWERVKEFKALS------ 387 (476)
T ss_pred Cccchhc--cCceeecHHHHHHHHHHhCCCCeecc-cccHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhc------
Confidence 9999974 56778999999999987667777777 6667777888899998865 556788888888887631
Q ss_pred cCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCCcc-------eEE--eCCCcHHHHH
Q 011856 391 AGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEA-------GFT--SLAHSSDDIQ 461 (476)
Q Consensus 391 ~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~-------~~~--~~~~t~e~i~ 461 (476)
+... ...++.+.+. +......+++.|+++||++.+..+|. +|+ +..||++||+
T Consensus 388 -G~~~----~sPI~pI~ig-------------~~~~a~~~~~~L~~~Gi~v~~i~yPtVP~g~~rLRi~lsA~Ht~edId 449 (476)
T PLN02955 388 -GVDI----SSPIISLVVG-------------NQEKALKASRYLLKSGFHVMAIRPPTVPPNSCRLRVTLSAAHTTEDVK 449 (476)
T ss_pred -CCCC----CCCEEEEEeC-------------CHHHHHHHHHHHHHCCCEEEEECCCCCCCCCceEEEeeCCCCCHHHHH
Confidence 2111 1445555553 34556788999999999998776553 454 6799999999
Q ss_pred HHHHHHHHHHHH
Q 011856 462 HTITAAEKVKMR 473 (476)
Q Consensus 462 ~~~~~l~~~~~~ 473 (476)
+++++|.++.+.
T Consensus 450 ~lv~~L~~~~~~ 461 (476)
T PLN02955 450 KLITALSSCLDF 461 (476)
T ss_pred HHHHHHHHHHhh
Confidence 999999988654
No 91
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=100.00 E-value=5.8e-34 Score=286.50 Aligned_cols=329 Identities=21% Similarity=0.226 Sum_probs=245.5
Q ss_pred cCCCEEEecccChhhccCCC-CcHHHHHHHHHHHHh-cCC------CCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHH
Q 011856 96 IDGNEYIDYVGSWGPAIIGH-ADDQVLAALGETMKK-GTS------FGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEA 167 (476)
Q Consensus 96 ~dG~~~iD~~~~~~~~~lG~-~~p~v~~a~~~~l~~-~~~------~~~~~~~~~~la~~l~~~~~~~e~v~~~~sGseA 167 (476)
.+|+++++|+++ +|||. +||+|++|+.+++++ +.. .+++.+...+|+++++++++ .+.+++++||++|
T Consensus 42 ~~~~~~~~~~sn---~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~g-~~~~l~~~sG~~a 117 (402)
T TIGR01821 42 DGAKDVTVWCSN---DYLGMGQHPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLHG-KESALVFTSGYVA 117 (402)
T ss_pred CCCeeEEEeEcc---CcCCCCCCHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHhC-CCeEEEECchHHH
Confidence 346999999999 99999 599999999999988 322 12356778899999999985 5788999999999
Q ss_pred HHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCC-CC
Q 011856 168 CMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK-GE 246 (476)
Q Consensus 168 ~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~-~~ 246 (476)
++.+++++... .++++|+.+..+|+.....+...+. ++..++++|+++++++++... ++
T Consensus 118 n~~ai~~l~~~-~~~~~v~~~~~~h~s~~~~~~~~g~-------------------~~~~~~~~d~~~l~~~l~~~~~~~ 177 (402)
T TIGR01821 118 NDATLATLAKI-IPGCVIFSDELNHASMIEGIRHSGA-------------------EKFIFRHNDVAHLEKLLQSVDPNR 177 (402)
T ss_pred HHHHHHHhhCC-CCCCEEEEcchHhHHHHHHHHHcCC-------------------eEEEECCCCHHHHHHHHHhccCCC
Confidence 99999975433 2456778788899866554433322 234567789999999997543 25
Q ss_pred eEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-Cc--cccccchhhccCC--CCchh--hhhhhcCCC
Q 011856 247 IAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GF--RLAYGGAQEYFGV--TPDLT--TLGKIIGGG 319 (476)
Q Consensus 247 ~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~--r~g~~~~~~~~g~--~pDi~--t~sK~lg~G 319 (476)
+++|++|++++++|.+.| +++|+++|++||++||+||+|+ |+ ..|. +..+++++ .+|++ ||||++|.
T Consensus 178 ~~~v~~e~~~~~~G~~~~----l~~i~~l~~~~~~~livDea~~~G~~g~~g~-g~~~~~~~~~~~div~~t~sKa~g~- 251 (402)
T TIGR01821 178 PKIIAFESVYSMDGDIAP----IEEICDLADKYGALTYLDEVHAVGLYGPRGG-GIAERDGLMHRIDIIEGTLAKAFGV- 251 (402)
T ss_pred CeEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEeCcccccccCCCCC-ccchhccCCCCCeEEEEechhhhcc-
Confidence 789999999999999998 9999999999999999999996 65 3333 33455665 46776 89999983
Q ss_pred CcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHhhhcCCceEee
Q 011856 320 LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGG 398 (476)
Q Consensus 320 ~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~ 398 (476)
..||+++++++++.+......+.+ +.+.+|+++++++++|+.+++ +.+.++++++.+++++.|+++. +.. +.
T Consensus 252 -~GG~i~~~~~~~~~l~~~~~~~~~-t~~~~~~~~aaa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~g--~~~---~~ 324 (402)
T TIGR01821 252 -VGGYIAASRKLIDAIRSYAPGFIF-TTSLPPAIAAGATASIRHLKESQDLRRAHQENVKRLKNLLEALG--IPV---IP 324 (402)
T ss_pred -CCceeecCHHHHHHHHHhCcCcee-cCcCCHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHcC--CCc---CC
Confidence 237888999999888643222222 457899999999999998876 3456667788888988888752 221 23
Q ss_pred eeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHH-CCeEeccCCC-------cceEE--eCCCcHHHHHHHHHHHH
Q 011856 399 YISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLE-EGVYFAPSQF-------EAGFT--SLAHSSDDIQHTITAAE 468 (476)
Q Consensus 399 ~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~~~-------~~~~~--~~~~t~e~i~~~~~~l~ 468 (476)
+.+.++.+.+.. .....++.+.|++ +||++.+..+ ..+|+ ++.+|++|+++++++|+
T Consensus 325 ~~~~i~~i~~~~-------------~~~a~~~~~~L~~~~Gi~v~~~~~p~~~~g~~~lRis~~~~~t~edi~~~~~~l~ 391 (402)
T TIGR01821 325 NPSHIVPVIIGD-------------AALCKKVSDLLLNKHGIYVQPINYPTVPRGTERLRITPTPAHTDKMIDDLVEALL 391 (402)
T ss_pred CCCCEEEEEeCC-------------HHHHHHHHHHHHhcCCEEEEeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence 456676665421 1234578888875 5999876422 34565 56899999999999999
Q ss_pred HHHHHh
Q 011856 469 KVKMRF 474 (476)
Q Consensus 469 ~~~~~~ 474 (476)
++++++
T Consensus 392 ~~~~~~ 397 (402)
T TIGR01821 392 LVWDRL 397 (402)
T ss_pred HHHHHc
Confidence 998764
No 92
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=100.00 E-value=5.8e-34 Score=286.57 Aligned_cols=327 Identities=20% Similarity=0.217 Sum_probs=247.3
Q ss_pred CCCEEEecccChhhccCCC-CcHHHHHHHHHHHHhc-CCC------CCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHH
Q 011856 97 DGNEYIDYVGSWGPAIIGH-ADDQVLAALGETMKKG-TSF------GAPCLLENVLAEMVISAVPSIEMVRFVNSGTEAC 168 (476)
Q Consensus 97 dG~~~iD~~~~~~~~~lG~-~~p~v~~a~~~~l~~~-~~~------~~~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~ 168 (476)
+|+++++|+++ +|||+ +||+|++|+.+++++. ... .+..+...+|+++++++++ .+++++++||++|+
T Consensus 43 ~~~~~~~~~sn---~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g-~~~~~~~~SG~~An 118 (406)
T PRK13393 43 GPREVTVWCSN---DYLGMGQHPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHG-KEAALLFTSGYVSN 118 (406)
T ss_pred CCccEEEeecc---cccCCCCCHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHhC-CCcEEEeCCcHHHH
Confidence 46899999999 99999 7999999999999883 211 1235578899999999984 58999999999999
Q ss_pred HHHHH-HHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcC-CCC
Q 011856 169 MGVLR-LARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN-KGE 246 (476)
Q Consensus 169 ~~al~-~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~-~~~ 246 (476)
+.+++ +++.+ ++++|+++..||+.....+...+. .+..++++|++++++.++.. +++
T Consensus 119 ~~ai~~l~~~~--~g~~I~~~~~~H~s~~~~~~~~g~-------------------~~~~~~~~d~~~l~~~l~~~~~~~ 177 (406)
T PRK13393 119 WAALSTLGSRL--PGCVILSDELNHASMIEGIRHSRA-------------------EKRIFRHNDPADLERKLSDLDPHR 177 (406)
T ss_pred HHHHHHhhcCC--CCCEEEEccchhHHHHHHHHHcCC-------------------eEEEeCCCCHHHHHHHHHhccCCC
Confidence 99999 33322 456888899999977665543322 24567788999999988754 235
Q ss_pred eEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-Cc--cccccchhhccCCC--Cchh--hhhhhcCCC
Q 011856 247 IAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GF--RLAYGGAQEYFGVT--PDLT--TLGKIIGGG 319 (476)
Q Consensus 247 ~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~--r~g~~~~~~~~g~~--pDi~--t~sK~lg~G 319 (476)
+++|++|++++++|.+.| +++|.++|++||+++|+||+|+ |+ +.|..+ .+++++. +|++ ||||+++.
T Consensus 178 ~~~v~~~~v~~~~G~~~~----l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~-~~~~~~~~~~~i~~~tlsKa~g~- 251 (406)
T PRK13393 178 PKLVAFESVYSMDGDIAP----IAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGI-AEREGLADRLTIIEGTLAKAFGV- 251 (406)
T ss_pred CEEEEEcCCCCCCCchhC----HHHHHHHHHHcCCEEEEECCccccccCCCCCch-hhhcCCCCCCeEEEEeCchhhcc-
Confidence 789999999999999999 9999999999999999999995 77 445433 3666665 5666 89999983
Q ss_pred CcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCC-CHHHHHHHHHHHHHHHHHHHhhhcCCceEee
Q 011856 320 LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEP-GTYEYLNKITGELTQGIIDAGKKAGHAICGG 398 (476)
Q Consensus 320 ~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~-~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~ 398 (476)
..||+++++++++.+......+. .+.+.+|.+++++.++|+.+++. ...++++++.+++++.|+++. .. .++
T Consensus 252 -~GG~~~~~~~~~~~l~~~~~~~~-~t~~~~p~~~aa~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~g--~~---~~~ 324 (406)
T PRK13393 252 -MGGYITGSAALCDFIRSFASGFI-FTTSLPPAVAAGALASVRHLKASSAERERHQDRVARLRARLDKAG--IP---HLP 324 (406)
T ss_pred -cCceeeCCHHHHHHHHHhCcCce-ecCccCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHcC--CC---cCC
Confidence 23788889999888764322222 35577899999999999987653 234666788889999888752 22 235
Q ss_pred eeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHH-CCeEeccCCC-------cceEE--eCCCcHHHHHHHHHHHH
Q 011856 399 YISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLE-EGVYFAPSQF-------EAGFT--SLAHSSDDIQHTITAAE 468 (476)
Q Consensus 399 ~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~~~-------~~~~~--~~~~t~e~i~~~~~~l~ 468 (476)
+.|.++.+.+.+ .....++.+.|++ +||++.+..+ ..+|+ ++.+|++|+|+++++|+
T Consensus 325 ~~~~i~~v~~~~-------------~~~~~~l~~~L~~~~Gi~v~~~~~p~~p~g~~~iRis~~~~~t~edid~l~~~l~ 391 (406)
T PRK13393 325 NPSHIVPVMVGD-------------PVLCKQISDELLDRYGIYVQPINYPTVPRGTERLRITPSPLHTDADIEHLVQALS 391 (406)
T ss_pred CCCCeEEEEeCC-------------HHHHHHHHHHHHHhCCEEEEeECCCCCCCCCceEEEEECCCCCHHHHHHHHHHHH
Confidence 677787775521 1234678888887 5999876422 34666 57899999999999999
Q ss_pred HHHHHh
Q 011856 469 KVKMRF 474 (476)
Q Consensus 469 ~~~~~~ 474 (476)
++++++
T Consensus 392 ~~~~~~ 397 (406)
T PRK13393 392 EIWARL 397 (406)
T ss_pred HHHHhc
Confidence 987653
No 93
>PRK09064 5-aminolevulinate synthase; Validated
Probab=100.00 E-value=4.4e-33 Score=280.67 Aligned_cols=327 Identities=21% Similarity=0.227 Sum_probs=243.8
Q ss_pred CCEEEecccChhhccCCCC-cHHHHHHHHHHHHhc-CC------CCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHH
Q 011856 98 GNEYIDYVGSWGPAIIGHA-DDQVLAALGETMKKG-TS------FGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACM 169 (476)
Q Consensus 98 G~~~iD~~~~~~~~~lG~~-~p~v~~a~~~~l~~~-~~------~~~~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~ 169 (476)
|++++||+++ +|||++ ||+|++++.+++++. .. ..++.+...+|+++++++++ .+..++++||++|++
T Consensus 45 ~~~~~~~~s~---dylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~g-~~~~~~~~sG~~an~ 120 (407)
T PRK09064 45 EREVTVWCSN---DYLGMGQHPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLHG-KEAALVFTSGYVSND 120 (407)
T ss_pred CceEEEEECC---CCcCCCCCHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHhC-CCcEEEECcHHHHHH
Confidence 5899999999 999995 999999999999873 21 12357788999999999885 567888899999999
Q ss_pred HHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCC-CCeE
Q 011856 170 GVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK-GEIA 248 (476)
Q Consensus 170 ~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~-~~~a 248 (476)
.++++++.. .++.+++.+..+|+.....+...+. +...++++|+++|+++++... ++++
T Consensus 121 ~ai~~l~~~-~~~~~i~~~~~~h~s~~~~~~~~~~-------------------~~~~~~~~d~~~le~~l~~~~~~~~~ 180 (407)
T PRK09064 121 ATLSTLAKL-IPDCVIFSDELNHASMIEGIRRSRC-------------------EKHIFRHNDVAHLEELLAAADPDRPK 180 (407)
T ss_pred HHHHHHhCC-CCCCEEEEeCcchHHHHHHHHHcCC-------------------cEEEECCCCHHHHHHHHHhccCCCCe
Confidence 999975443 3456777776667654433322221 245567889999999997532 4678
Q ss_pred EEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-Cc--cccccchhhccCC--CCchh--hhhhhcCCCCc
Q 011856 249 AIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GF--RLAYGGAQEYFGV--TPDLT--TLGKIIGGGLP 321 (476)
Q Consensus 249 ~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~--r~g~~~~~~~~g~--~pDi~--t~sK~lg~G~~ 321 (476)
+|++|++++++|.+.| +++|+++|++||++||+||+|+ |+ +.|..+ .++.++ .+|++ ||||++|. .
T Consensus 181 ~v~~~~v~s~~G~~~~----l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~-~~~~~~~~~~div~~t~sKa~g~--~ 253 (407)
T PRK09064 181 LIAFESVYSMDGDIAP----IAEICDLADKYNALTYLDEVHAVGMYGPRGGGI-AERDGLMDRIDIIEGTLAKAFGV--M 253 (407)
T ss_pred EEEEeCCCCCCccccC----HHHHHHHHHHcCCEEEEECCCcccccCCCCCCh-HHhcCCCCCCeEEEEecchhhhc--c
Confidence 9999999999999998 9999999999999999999996 74 445433 456665 46877 89999973 2
Q ss_pred EEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeee
Q 011856 322 VGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYI 400 (476)
Q Consensus 322 iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~ 400 (476)
.||+++++++++.+......+.+ +.+.+|.++++++++|+.+++ +...++++++++++++.|++++ +.+ +...
T Consensus 254 GG~~~~~~~~~~~l~~~~~~~~~-t~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~g--~~~---~~~~ 327 (407)
T PRK09064 254 GGYIAGSAALVDAVRSYAPGFIF-TTSLPPAIAAAALASIRHLKESNEERERHQERAAKLKAALDAAG--IPV---MPNE 327 (407)
T ss_pred CceEecCHHHHHHHHHhCccccc-cCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcC--CCC---CCCC
Confidence 37889999998887643222222 447789999999999998876 3446888999999999998753 221 2234
Q ss_pred ceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHH-CCeEeccCCC-------cceEE--eCCCcHHHHHHHHHHHHHH
Q 011856 401 SGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLE-EGVYFAPSQF-------EAGFT--SLAHSSDDIQHTITAAEKV 470 (476)
Q Consensus 401 g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~~~-------~~~~~--~~~~t~e~i~~~~~~l~~~ 470 (476)
+.++.+.+.+ .....++.+.|++ +||++.+..+ ..+|+ ++.+|++|+++++++|+++
T Consensus 328 ~~iv~i~~~~-------------~~~~~~l~~~L~~~~gi~v~~~~~p~~~~~~~~lRis~~~~~t~edi~~l~~~l~~~ 394 (407)
T PRK09064 328 SHIVPVMVGD-------------PEKCKKASDMLLEEHGIYVQPINYPTVPRGTERLRITPTPFHTDEMIDHLVEALVEV 394 (407)
T ss_pred CCEEEEEeCC-------------HHHHHHHHHHHHHhCCEEEeeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 6666665521 1234678888875 5999976432 34566 5778999999999999999
Q ss_pred HHHh
Q 011856 471 KMRF 474 (476)
Q Consensus 471 ~~~~ 474 (476)
++++
T Consensus 395 ~~~~ 398 (407)
T PRK09064 395 WARL 398 (407)
T ss_pred HHHc
Confidence 8764
No 94
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=100.00 E-value=8.6e-33 Score=275.38 Aligned_cols=332 Identities=16% Similarity=0.200 Sum_probs=238.1
Q ss_pred EecccChhhccCCC-CcHHHHHHHHHHHHh-cCC------CCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHH
Q 011856 102 IDYVGSWGPAIIGH-ADDQVLAALGETMKK-GTS------FGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLR 173 (476)
Q Consensus 102 iD~~~~~~~~~lG~-~~p~v~~a~~~~l~~-~~~------~~~~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~ 173 (476)
|||.++ +|||. .||++++++.+++++ +.+ ++.......+|.+++++++ +.+..++++||+.|+..++.
T Consensus 1 ~~f~s~---dyLgl~~~~~~~~~~~~a~~~~g~~~~~sr~~yg~~~~~~~LE~~lA~~~-g~e~al~~~sG~~a~~~~i~ 76 (392)
T PLN03227 1 LNFATH---DFLSTSSSPTLRQTALESLSHYGCGSCGPRGFYGTIDAHLELEQCMAEFL-GTESAILYSDGASTTSSTVA 76 (392)
T ss_pred CCCcCc---CccCCCCCHHHHHHHHHHHHHhCCCCcccccccCChHHHHHHHHHHHHHh-CCCcEEEecCcHHHHHHHHH
Confidence 578888 99999 599999999999987 322 2223457788999999988 55678888899999998887
Q ss_pred HHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcC----------
Q 011856 174 LARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN---------- 243 (476)
Q Consensus 174 ~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~---------- 243 (476)
. +.++++.|+.+...|+.....+...+ ..+..++++|++++++.++..
T Consensus 77 ~---l~~~GD~Vl~~~~~h~s~~~~~~l~~-------------------~~~~~~~~~d~~~l~~~~~~i~~~~~a~~~~ 134 (392)
T PLN03227 77 A---FAKRGDLLVVDRGVNEALLVGVSLSR-------------------ANVRWFRHNDMKDLRRVLEQVRAQDVALKRK 134 (392)
T ss_pred H---hCCCCCEEEEeccccHHHHHHHHHcC-------------------CeEEEeCCCCHHHHHHHHHHhhhhccccccc
Confidence 3 44555555555555554433322211 135667888888887765431
Q ss_pred -CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-C-c-cccccchhhccCCCC----chhhhh--
Q 011856 244 -KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-G-F-RLAYGGAQEYFGVTP----DLTTLG-- 313 (476)
Q Consensus 244 -~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~-g-~-r~g~~~~~~~~g~~p----Di~t~s-- 313 (476)
.+++++|++||+++++|.+.| +++|+++|++||++||+||+|+ | + ++|. +..+++|+.| |++++|
T Consensus 135 ~~~~t~~vi~E~v~~~~G~i~~----l~~i~~l~~~~g~~livDe~~~~g~~g~~G~-g~~~~~g~~p~~~~Div~~sls 209 (392)
T PLN03227 135 PTDQRRFLVVEGLYKNTGTLAP----LKELVALKEEFHYRLILDESFSFGTLGKSGR-GSLEHAGLKPMVHAEIVTFSLE 209 (392)
T ss_pred cCCCcEEEEEcCCcCCCCcccC----HHHHHHHHHHcCCEEEEECcccccccCCCCC-cHHHHcCCCCCCCceEEEeech
Confidence 135788999999999999999 9999999999999999999995 2 2 3444 6789999999 988654
Q ss_pred hhcCCCCcEEEEEecHHHHHhhcCCCCccccCCCCCc--HHHHHHHHHHHHH-hcCCCHHHHHHHHHHHHHHHHHHHhhh
Q 011856 314 KIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGN--PLAMTAGIHTLKR-LKEPGTYEYLNKITGELTQGIIDAGKK 390 (476)
Q Consensus 314 K~lg~G~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~--~~~~aaa~aal~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~ 390 (476)
|++ |.+.|++++++++++.++. ..+..+|+++ |+.+++++++++. ++.+++++++++++++++++|++. .
T Consensus 210 k~~--g~~gg~v~~~~~~~~~~~~---~~~~~~~~~~~~p~~~~aa~~al~~~~~~~~~~~~l~~~~~~l~~~L~~~--~ 282 (392)
T PLN03227 210 NAF--GSVGGMTVGSEEVVDHQRL---SGSGYCFSASAPPFLAKADATATAGELAGPQLLNRLHDSIANLYSTLTNS--S 282 (392)
T ss_pred hhh--hccCcEEecCHHHHHHHHH---hCcCccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhc--C
Confidence 655 3466778899999887752 2344566665 7778888877755 445789999999999999999873 3
Q ss_pred cCCceEeee--------eceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCC-----------cceEE
Q 011856 391 AGHAICGGY--------ISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-----------EAGFT 451 (476)
Q Consensus 391 ~~~~~~v~~--------~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~-----------~~~~~ 451 (476)
++.+.++++ .|+++++++.+.+... ...+.....++.+.|+++|+++.+.+. ..+|+
T Consensus 283 ~~~~~~~rg~~~~~~~~~~~i~~i~~~~~~~~~----~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~~~~~~~~P~~~iR~ 358 (392)
T PLN03227 283 HPYALKLRNRLVITSDPISPIIYLRLSDQEATR----RTDETLILDQIAHHSLSEGVAVVSTGGHVKKFLQLVPPPCLRV 358 (392)
T ss_pred CccccccccccccCCCCCCCEEEEEeCCHHHhh----hhhhhhHHHHHHHHHHHCCCEEEecccccCCcCCCCCCceEEE
Confidence 555556665 3567888885421110 001112345888999999999864321 12333
Q ss_pred --eCCCcHHHHHHHHHHHHHHHHHhh
Q 011856 452 --SLAHSSDDIQHTITAAEKVKMRFL 475 (476)
Q Consensus 452 --~~~~t~e~i~~~~~~l~~~~~~~~ 475 (476)
+..||+||||+++++|++++++++
T Consensus 359 ~~~~~~t~eei~~~~~~l~~~~~~~~ 384 (392)
T PLN03227 359 VANASHTREDIDKLLTVLGEAVEAIL 384 (392)
T ss_pred EecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 678899999999999999998753
No 95
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=100.00 E-value=1.1e-31 Score=268.89 Aligned_cols=336 Identities=21% Similarity=0.276 Sum_probs=245.4
Q ss_pred eEEEeecCCEEEEcCCCEEEecccChhhccCCC-CcHHHHHHHHHHHHh-cCC------CCCCCHHHHHHHHHHHhhCCC
Q 011856 83 IVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGH-ADDQVLAALGETMKK-GTS------FGAPCLLENVLAEMVISAVPS 154 (476)
Q Consensus 83 ~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~-~~p~v~~a~~~~l~~-~~~------~~~~~~~~~~la~~l~~~~~~ 154 (476)
.++.+++|+++|+ +|++|||+.++ .++|| ++|+|++++.+++.+ +.. ..++.+...++++.++++++
T Consensus 24 ~~~~~~~g~~~~~-~g~~~id~~~~---~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~- 98 (385)
T PRK05958 24 RPREGGAGRWLVV-DGRRMLNFASN---DYLGLARHPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELAEWFG- 98 (385)
T ss_pred cccccCCCceeEe-CCceEEEeeCC---CcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhC-
Confidence 4688999999997 99999999998 57898 789999999999976 211 11346678889999999884
Q ss_pred CCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHH
Q 011856 155 IEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVS 234 (476)
Q Consensus 155 ~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 234 (476)
.+.++++++|++++..+++ .+.++++.|++...+|+.+...+...|. ++..++.+|++
T Consensus 99 ~~~~i~~~~g~~~~~~~l~---~~~~~gd~V~~~~~~~~~~~~~~~~~g~-------------------~~~~~~~~d~~ 156 (385)
T PRK05958 99 AERALLFSSGYAANLAVLT---ALAGKGDLIVSDKLNHASLIDGARLSRA-------------------RVRRYPHNDVD 156 (385)
T ss_pred CCcEEEECcHHHHHHHHHH---HhCCCCCEEEEeCccCHHHHHHHHhcCC-------------------ceEEeCCCCHH
Confidence 5677788889999988877 3455555566666777766555443332 23445666899
Q ss_pred HHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-Cc--cccccchhhccC--CCCc-
Q 011856 235 ALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GF--RLAYGGAQEYFG--VTPD- 308 (476)
Q Consensus 235 ~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~--r~g~~~~~~~~g--~~pD- 308 (476)
++++.++..++++++++++++++++|.+.+ +++|.++|++||++||+||+|. |+ +.|... ...++ ..+|
T Consensus 157 ~l~~~i~~~~~~~~lvi~~~~~~~~G~~~~----l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~-~~~~~~~~~~~~ 231 (385)
T PRK05958 157 ALEALLAKWRAGRALIVTESVFSMDGDLAP----LAELVALARRHGAWLLVDEAHGTGVLGPQGRGL-AAEAGLAGEPDV 231 (385)
T ss_pred HHHHHHHhccCCCeEEEEEecccCCCCcCC----HHHHHHHHHHhCCEEEEECcccccccCCCCCch-HHhhCCCCCCce
Confidence 999999754335788899999988998887 9999999999999999999995 43 233322 22222 2456
Q ss_pred --hhhhhhhcCCCCcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHH
Q 011856 309 --LTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGII 385 (476)
Q Consensus 309 --i~t~sK~lg~G~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~ 385 (476)
+.++||+++. +.|++++++++++.+......+ ..+.+.+++.++++.++|+.+++ +++.+++.++++++.+.|+
T Consensus 232 i~~~s~sK~~~~--~Gg~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~l~~~L~ 308 (385)
T PRK05958 232 ILVGTLGKALGS--SGAAVLGSETLIDYLINRARPF-IFTTALPPAQAAAARAALRILRREPERRERLAALIARLRAGLR 308 (385)
T ss_pred EEEEechhhccc--CCcEEEcCHHHHHHHHHhCccc-eecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 4589999974 3488899999988765322222 23446788888889899988766 4677888899999999888
Q ss_pred HHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCC-------CcceEEeC--CCc
Q 011856 386 DAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ-------FEAGFTSL--AHS 456 (476)
Q Consensus 386 ~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~-------~~~~~~~~--~~t 456 (476)
++. .. .+.+.|.++++.+.+ .....++.+.|+++||.+.+.. ...+|+++ .++
T Consensus 309 ~~~--~~---~~~~~~~~~~~~~~~-------------~~~~~~~~~~l~~~gI~v~~~~~~~~~~~~~~lRis~~~~~~ 370 (385)
T PRK05958 309 ALG--FQ---LMDSQSAIQPLIVGD-------------NERALALAAALQEQGFWVGAIRPPTVPAGTSRLRITLTAAHT 370 (385)
T ss_pred HcC--CC---cCCCCCCEEEEEeCC-------------HHHHHHHHHHHHHCCceEecccCCCCCCCCceEEEEecCCCC
Confidence 752 11 134567777777631 1234678899999999997632 23577754 479
Q ss_pred HHHHHHHHHHHHHHH
Q 011856 457 SDDIQHTITAAEKVK 471 (476)
Q Consensus 457 ~e~i~~~~~~l~~~~ 471 (476)
++++++++++|++++
T Consensus 371 ~~~i~~~l~~l~~~~ 385 (385)
T PRK05958 371 EADIDRLLEALAEAL 385 (385)
T ss_pred HHHHHHHHHHHHhcC
Confidence 999999999998753
No 96
>PRK07179 hypothetical protein; Provisional
Probab=100.00 E-value=1.4e-31 Score=269.46 Aligned_cols=333 Identities=19% Similarity=0.231 Sum_probs=238.9
Q ss_pred CCCCeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhc-CC------CCCCCHHHHHHHHHHHhh
Q 011856 79 GGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKG-TS------FGAPCLLENVLAEMVISA 151 (476)
Q Consensus 79 ~~~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~-~~------~~~~~~~~~~la~~l~~~ 151 (476)
++.+++..++.|.+++|.+||.||||. +||+|++++.+++++. .. +....+...+|.+.++++
T Consensus 42 ~~~~~~~~~~~g~~~~~~~~~~YL~l~----------~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~ 111 (407)
T PRK07179 42 NGKHLVLGKTPGPDAIILQSNDYLNLS----------GHPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAF 111 (407)
T ss_pred CCceEEeecCCCCcEEEeecCCccCCC----------CCHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHHH
Confidence 345888999999999999999998877 5899999999999762 11 112235678888999988
Q ss_pred CCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCC
Q 011856 152 VPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFN 231 (476)
Q Consensus 152 ~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (476)
+ +.+.+++++||++|++.+++. +..+++.++.+...|......+...+. ++..++++
T Consensus 112 ~-g~~~~~~~~sG~~An~~~l~~---l~~~g~~v~~~~~~h~s~~~~~~~~g~-------------------~~~~~~~~ 168 (407)
T PRK07179 112 T-GFESCLLCQSGWAANVGLLQT---IADPNTPVYIDFFAHMSLWEGVRAAGA-------------------QAHPFRHN 168 (407)
T ss_pred h-CCCcEEEECCHHHHHHHHHHH---hCCCCCEEEEECCcCHHHHHHHHHCCC-------------------eEEEecCC
Confidence 8 557789999999999999994 333334444455555443322222111 24556678
Q ss_pred CHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-Cc--cccccchhhccCCC--
Q 011856 232 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GF--RLAYGGAQEYFGVT-- 306 (476)
Q Consensus 232 d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~--r~g~~~~~~~~g~~-- 306 (476)
|+++|++.++++ .+++|+++++++++|.+.| +++|.++|++||++||+||+|+ |. +.|.. ....+++.
T Consensus 169 d~~~l~~~l~~~--~~~lV~v~~v~n~tG~i~p----l~~I~~l~~~~~~~livDea~~~g~~g~~g~g-~~~~~~~~~~ 241 (407)
T PRK07179 169 DVDHLRRQIERH--GPGIIVVDSVYSTTGTIAP----LADIVDIAEEFGCVLVVDESHSLGTHGPQGAG-LVAELGLTSR 241 (407)
T ss_pred CHHHHHHHHHhc--CCeEEEECCCCCCCCcccc----HHHHHHHHHHcCCEEEEECcccccCcCCCCCc-hHHhcCCCCC
Confidence 999999999743 4688999999999999999 9999999999999999999996 32 23322 24456664
Q ss_pred Cchh--hhhhhcCCCCcEEEEEecHHHHHhhcCCC-CccccCCCCCcHHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHH
Q 011856 307 PDLT--TLGKIIGGGLPVGAYGGRRDIMEMVAPAG-PMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQ 382 (476)
Q Consensus 307 pDi~--t~sK~lg~G~~iG~~~~~~~i~~~l~~~~-~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~ 382 (476)
+|++ +++|++++ |+|++++++++++.+.... +..+.+|+ ++..++++.++++.+.+ ++.+++++++.+++++
T Consensus 242 vdi~~~S~sK~~g~--~~G~l~~~~~~~~~~~~~~~~~~~~~t~--~~~~~aa~~aal~~~~~~~~~~~~l~~~~~~l~~ 317 (407)
T PRK07179 242 VHFITASLAKAFAG--RAGIITCPRELAEYVPFVSYPAIFSSTL--LPHEIAGLEATLEVIESADDRRARLHANARFLRE 317 (407)
T ss_pred CCEEEeechHhhhc--cCeEEEeCHHHHHHHHHhCcCeeeCCCC--CHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 3765 58999975 7999999999888775322 12233333 35555666778887765 4578899999999999
Q ss_pred HHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEec----cCC---CcceEE--eC
Q 011856 383 GIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFA----PSQ---FEAGFT--SL 453 (476)
Q Consensus 383 ~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~----~~~---~~~~~~--~~ 453 (476)
.|+++. + .+.+.+.++++.+.. ......+.+.|.++||++. |.. ...+|+ +.
T Consensus 318 ~L~~~g--~----~v~~~~~i~~l~~~~-------------~~~~~~~~~~L~~~GI~~~~~~~p~~~~~~~~lRis~~~ 378 (407)
T PRK07179 318 GLSELG--Y----NIRSESQIIALETGS-------------ERNTEVLRDALEERNVFGAVFCAPATPKNRNLIRLSLNA 378 (407)
T ss_pred HHHHcC--C----CCCCCCCEEEEEeCC-------------HHHHHHHHHHHHHCCceEeeecCCCCCCCCceEEEEECC
Confidence 998752 2 223557787777632 1223567788999999743 321 235666 46
Q ss_pred CCcHHHHHHHHHHHHHHHHHh
Q 011856 454 AHSSDDIQHTITAAEKVKMRF 474 (476)
Q Consensus 454 ~~t~e~i~~~~~~l~~~~~~~ 474 (476)
.+|++|+++++++|++++++.
T Consensus 379 ~~t~edi~~~~~~l~~~~~~~ 399 (407)
T PRK07179 379 DLTASDLDRVLEVCREARDEV 399 (407)
T ss_pred CCCHHHHHHHHHHHHHHHHhh
Confidence 689999999999999998764
No 97
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=100.00 E-value=5.3e-31 Score=263.91 Aligned_cols=340 Identities=19% Similarity=0.256 Sum_probs=243.2
Q ss_pred CeEEEeecCCEEEEcCCCEEEecccChhhccCCC-CcHHHHHHHHHHHHhc-CCC------CCCCHHHHHHHHHHHhhCC
Q 011856 82 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGH-ADDQVLAALGETMKKG-TSF------GAPCLLENVLAEMVISAVP 153 (476)
Q Consensus 82 p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~-~~p~v~~a~~~~l~~~-~~~------~~~~~~~~~la~~l~~~~~ 153 (476)
|.++.+++|+|+| .||++||||.++ +++|| ++|.+.+++.+++++. ... .+..++..++++++++.++
T Consensus 17 ~~~~~~~~g~~~~-~~g~~~id~~~~---~~~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~g 92 (385)
T TIGR01825 17 IRVLESAQGPRVR-VNGKEVINLSSN---NYLGFADHPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAKFKK 92 (385)
T ss_pred ccccccCCCceEE-ECCceEEEeecc---CccCCCCCHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHHHhC
Confidence 7889999999999 999999999987 77899 7999999999998752 211 1246788999999998875
Q ss_pred CCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCH
Q 011856 154 SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDV 233 (476)
Q Consensus 154 ~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 233 (476)
. +..++.+||++++..+++. +.+++++|+.+..+|+.....+...+.. ...+++.|+
T Consensus 93 ~-~~~i~~~sG~~a~~~a~~~---~~~~gd~vi~~~~~~~~~~~~~~~~g~~-------------------~~~~~~~d~ 149 (385)
T TIGR01825 93 T-EAALVFQSGFNTNQGVLSA---LLRKGDIVLSDELNHASIIDGLRLTKAT-------------------KKIYKHADM 149 (385)
T ss_pred C-CcEEEECcHHHHHHHHHHH---hCCCCCEEEEEccccHHHHHHHHhcCCc-------------------eEEeCCCCH
Confidence 4 4556677889999988884 3344445556667777554444333321 222345588
Q ss_pred HHHHHHHhcCC-CCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc---cccccchhhccCCCCc-
Q 011856 234 SALENLFENNK-GEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF---RLAYGGAQEYFGVTPD- 308 (476)
Q Consensus 234 ~~le~~l~~~~-~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~---r~g~~~~~~~~g~~pD- 308 (476)
+++++.+++.. +++++|+++++++++|.+.+ +++|.++|++||+++|+||+|..+ +.+. +...++++.+|
T Consensus 150 ~~l~~~l~~~~~~~~~~v~~~~v~~~tG~~~~----~~~i~~l~~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~~~~~ 224 (385)
T TIGR01825 150 DDLDRVLRENPSYGKKLIVTDGVFSMDGDVAP----LPEIVELAERYGAVTYVDDAHGSGVMGEAGR-GTVHHFGLEDKV 224 (385)
T ss_pred HHHHHHHHhhccCCCeEEEEecCCcCCCCccC----HHHHHHHHHHhCCEEEEECcccccCcCCCCC-ccHhhcCCCcCC
Confidence 99998887543 35788999999999999888 999999999999999999999543 2332 23344555555
Q ss_pred ---hhhhhhhcCCCCcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHH
Q 011856 309 ---LTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGI 384 (476)
Q Consensus 309 ---i~t~sK~lg~G~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L 384 (476)
+.+|||+++. +.||+++++++++.+......+..++ ..+++.++++.++++.+.+ .+..+++.++++++.+.|
T Consensus 225 ~i~~~s~sK~~~~--~gG~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L 301 (385)
T TIGR01825 225 DIQVGTLSKAIGV--VGGYAAGHKELIEYLKNRARPFLFST-AQPPAVVAALAAAVDELQRSPELMERLWDNTRFFKAGL 301 (385)
T ss_pred cEEEEeccHHhhc--CCCEEecCHHHHHHHHHhCccccccC-CCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 3589999963 55889999999888763222222222 3567888888999987654 567888889999999999
Q ss_pred HHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccC-------CCcceEE--eCCC
Q 011856 385 IDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPS-------QFEAGFT--SLAH 455 (476)
Q Consensus 385 ~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-------~~~~~~~--~~~~ 455 (476)
+++. ..+. ...+.++.+.+.. .....++++.|+++||++.+. +...+|+ ++.+
T Consensus 302 ~~~g--~~~~---~~~~~~~~~~~~~-------------~~~~~~~~~~L~~~gi~v~~~~~~~~~~~~~~iRi~~~~~~ 363 (385)
T TIGR01825 302 GKLG--YDTG---GSETPITPVVIGD-------------EKAAQEFSRRLFDEGIFAQSIVFPTVPRGTARIRNIPTAEH 363 (385)
T ss_pred HHcC--CCCC---CCCCCEEEEEECC-------------HHHHHHHHHHHHHCCcEEcccCCCCCCCCCceEEEEEcCCC
Confidence 8752 2211 2233455544321 122357889999999998543 2234555 5689
Q ss_pred cHHHHHHHHHHHHHHHHHh
Q 011856 456 SSDDIQHTITAAEKVKMRF 474 (476)
Q Consensus 456 t~e~i~~~~~~l~~~~~~~ 474 (476)
+++++++++++|+++++++
T Consensus 364 ~~e~i~~~~~~l~~~~~~~ 382 (385)
T TIGR01825 364 TKDDLDQALDAYEKVGKEL 382 (385)
T ss_pred CHHHHHHHHHHHHHHHHHh
Confidence 9999999999999998753
No 98
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=100.00 E-value=9.5e-31 Score=262.78 Aligned_cols=343 Identities=21% Similarity=0.286 Sum_probs=242.9
Q ss_pred CeEEEeecCCEEEEcCCCEEEecccChhhccCCCC-cHHHHHHHHHHHHh-cCCCC------CCCHHHHHHHHHHHhhCC
Q 011856 82 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHA-DDQVLAALGETMKK-GTSFG------APCLLENVLAEMVISAVP 153 (476)
Q Consensus 82 p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~-~p~v~~a~~~~l~~-~~~~~------~~~~~~~~la~~l~~~~~ 153 (476)
|.++.++.|.++++.+|++||||.++ +++|++ +|++++++.+++.+ +..+. +..+...+|.+.+++++
T Consensus 21 ~~~~~~~~~~~~~~~~g~~~i~~~~~---~~lg~~~~~~v~~~~~~~~~~~~~~~~~s~~~~G~~~~~~~le~~ia~~~- 96 (393)
T TIGR01822 21 ERIITSPQGADIRVADGREVLNFCAN---NYLGLSSHPDLIQAAKDALDEHGFGMSSVRFICGTQDIHKELEAKIAAFL- 96 (393)
T ss_pred ccccccCCCceEEecCCceEEEeeCC---CccccCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHh-
Confidence 67788999999998899999999999 899996 99999999999987 33221 22455678888888888
Q ss_pred CCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCH
Q 011856 154 SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDV 233 (476)
Q Consensus 154 ~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 233 (476)
+.+++++++||++|+..++... ..+++.|++.+ ..|......+...+. ..+.++++|+
T Consensus 97 g~~~~ii~~~~~~a~~~~~~~l--~~~gd~vi~~~-~~~~s~~~~~~~~~~-------------------~~~~~~~~d~ 154 (393)
T TIGR01822 97 GTEDTILYASCFDANGGLFETL--LGAEDAIISDA-LNHASIIDGVRLCKA-------------------KRYRYANNDM 154 (393)
T ss_pred CCCcEEEECchHHHHHHHHHHh--CCCCCEEEEec-cccHHHHHHHHhcCC-------------------ceEEeCCCCH
Confidence 4567888899999999887732 33455555544 444433333332221 1233456799
Q ss_pred HHHHHHHhcC---CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccc-cCc-cccccchhhccCCC--
Q 011856 234 SALENLFENN---KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM-TGF-RLAYGGAQEYFGVT-- 306 (476)
Q Consensus 234 ~~le~~l~~~---~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~-~g~-r~g~~~~~~~~g~~-- 306 (476)
++|++.+++. +.++++|+++++++++|.+.+ +++|.++|++||++||+||+| .|+ .....+..+..++.
T Consensus 155 ~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~----l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~ 230 (393)
T TIGR01822 155 ADLEAQLKEARAAGARHRLIATDGVFSMDGVIAP----LDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVMGR 230 (393)
T ss_pred HHHHHHHHhhhhcCCCceEEEEeCCccCCCCcCC----HHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCCCC
Confidence 9999999752 226788999999999999988 999999999999999999999 455 22112233344443
Q ss_pred Cchh--hhhhhcCCCCcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHH
Q 011856 307 PDLT--TLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQG 383 (476)
Q Consensus 307 pDi~--t~sK~lg~G~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~ 383 (476)
+|++ ++||+++ |+|+||+++++++++.+.+....+.. +.+.++..++++.++++.++. ++..++++++.+++++.
T Consensus 231 ~di~~~s~sK~l~-g~r~G~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~ 308 (393)
T TIGR01822 231 VDIITGTLGKALG-GASGGFTTARKEVVELLRQRSRPYLF-SNSLPPAVVGASIKVLEMLEASNELRDRLWANTRYFRER 308 (393)
T ss_pred CeEEEEEChHHhh-CCCcEEEEeCHHHHHHHHHhCcccee-cCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 5666 7999987 57999999999999887642222222 123356667778888887754 56788899999999998
Q ss_pred HHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCC-------cceEE--eCC
Q 011856 384 IIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-------EAGFT--SLA 454 (476)
Q Consensus 384 L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~-------~~~~~--~~~ 454 (476)
|++.. ..+ ..+.+.++.+.+. +.....++.+.|+++||++....+ ..+|+ +..
T Consensus 309 L~~~g--~~~---~~~~~~~~~i~~~-------------~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~iRis~~~~ 370 (393)
T TIGR01822 309 MEAAG--FDI---KPADHPIIPVMLY-------------DAVLAQRFARRLLEEGIYVTGFFYPVVPKGQARIRVQISAA 370 (393)
T ss_pred HHHcC--CCC---CCCCCCEEEEEeC-------------CHHHHHHHHHHHHHCCeeEeeeCCCCCCCCCceEEEEECCC
Confidence 87742 211 1223445554432 112346788999999999874321 23554 678
Q ss_pred CcHHHHHHHHHHHHHHHHHh
Q 011856 455 HSSDDIQHTITAAEKVKMRF 474 (476)
Q Consensus 455 ~t~e~i~~~~~~l~~~~~~~ 474 (476)
+|++||++++++|+++++++
T Consensus 371 ~t~edi~~~~~~l~~~~~~~ 390 (393)
T TIGR01822 371 HTEEQLDRAVEAFTRIGREL 390 (393)
T ss_pred CCHHHHHHHHHHHHHHHHHh
Confidence 89999999999999987654
No 99
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=100.00 E-value=1.6e-30 Score=261.62 Aligned_cols=342 Identities=23% Similarity=0.268 Sum_probs=240.6
Q ss_pred CeEEEeecCCEEEEcCCCEEEecccChhhccCCC-CcHHHHHHHHHHHHhc-CCC------CCCCHHHHHHHHHHHhhCC
Q 011856 82 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGH-ADDQVLAALGETMKKG-TSF------GAPCLLENVLAEMVISAVP 153 (476)
Q Consensus 82 p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~-~~p~v~~a~~~~l~~~-~~~------~~~~~~~~~la~~l~~~~~ 153 (476)
+..+++++|.++||.+|++||||.++ +++|+ .+|++.+++.+++++. ..+ .+..+++.+++++++++++
T Consensus 25 ~~~~~~~~~~~~~~~~g~~~i~l~~~---~~~~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~la~~~g 101 (397)
T PRK06939 25 ERVITSPQGADITVADGKEVINFCAN---NYLGLANHPELIAAAKAALDSHGFGMASVRFICGTQDLHKELEEKLAKFLG 101 (397)
T ss_pred cccccCCCCceEEecCCCeEEEeecc---CccccCCCHHHHHHHHHHHHHcCCCCcccccccCCcHHHHHHHHHHHHHhC
Confidence 34678999999999999999999987 77899 6999999999998762 211 1245778899999999885
Q ss_pred CCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCH
Q 011856 154 SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDV 233 (476)
Q Consensus 154 ~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 233 (476)
.. +.+++++|++++..+++.. ..+++.|++.++.|.+. ...+...+. +++.++++|+
T Consensus 102 ~~-~~i~~tsG~~a~~~~~~~l--~~~gd~vi~~~~~~~~~-~~~~~~~~~-------------------~~~~~~~~d~ 158 (397)
T PRK06939 102 TE-DAILYSSCFDANGGLFETL--LGKEDAIISDALNHASI-IDGVRLCKA-------------------KRYRYANNDM 158 (397)
T ss_pred CC-cEEEEcChHHHHHHHHHHh--CCCCCEEEEEhhhhHHH-HHHHHhcCC-------------------ceEEeCCCCH
Confidence 44 4455555799999988742 34456666666555443 222222222 2344455689
Q ss_pred HHHHHHHhcC---CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-Cc-c-ccccchhhccCC--
Q 011856 234 SALENLFENN---KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GF-R-LAYGGAQEYFGV-- 305 (476)
Q Consensus 234 ~~le~~l~~~---~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~-r-~g~~~~~~~~g~-- 305 (476)
+++++.+++. ..++++|+++++++++|.+.+ +++|.++|++||++||+||+|. |+ . .+. +....+++
T Consensus 159 ~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~----~~~l~~la~~~~~~li~De~~~~g~~~~~~~-~~~~~~~~~~ 233 (397)
T PRK06939 159 ADLEAQLKEAKEAGARHKLIATDGVFSMDGDIAP----LPEICDLADKYDALVMVDDSHAVGFVGENGR-GTVEHFGVMD 233 (397)
T ss_pred HHHHHHHHhhhccCCCCeEEEEecCcCCCCCcCC----HHHHHHHHHHhCCEEEEECcccccCcCCCCC-CHHHHcCCCC
Confidence 9999988642 225788888889998888776 9999999999999999999994 55 2 232 23344455
Q ss_pred CCchh--hhhhhcCCCCcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHH
Q 011856 306 TPDLT--TLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQ 382 (476)
Q Consensus 306 ~pDi~--t~sK~lg~G~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~ 382 (476)
.+|++ ++||+++ |+|+||+++++++++.+......+.. +.+.++..++++.++++.+.+ +++.++++++.+++++
T Consensus 234 ~~~i~~~S~sK~~~-g~r~G~v~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~ 311 (397)
T PRK06939 234 RVDIITGTLGKALG-GASGGYTAGRKEVIDWLRQRSRPYLF-SNSLAPAIVAASIKVLELLEESDELRDRLWENARYFRE 311 (397)
T ss_pred CCcEEEEECHHHhC-ccCceEEEeCHHHHHHHHHhCccccc-cCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 34666 7999996 45999999999999888642211111 123456667778888887755 5677888888888888
Q ss_pred HHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCC-------CcceEE--eC
Q 011856 383 GIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ-------FEAGFT--SL 453 (476)
Q Consensus 383 ~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~-------~~~~~~--~~ 453 (476)
.|++... .. ..+.+.++.+.+. +.....++++.|+++||.+.+.. ...+|+ +.
T Consensus 312 ~L~~~~~--~~---~~~~~~~~~~~~~-------------~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~~~~iRi~~~~ 373 (397)
T PRK06939 312 GMTAAGF--TL---GPGEHPIIPVMLG-------------DAKLAQEFADRLLEEGVYVIGFSFPVVPKGQARIRTQMSA 373 (397)
T ss_pred HHHHcCC--Cc---CCCCCCEEEEEEC-------------CHHHHHHHHHHHHHCCceEeeeCCCCCCCCCceEEEEECC
Confidence 8877521 11 2234555544432 11234678899999999887532 134665 45
Q ss_pred CCcHHHHHHHHHHHHHHHHHh
Q 011856 454 AHSSDDIQHTITAAEKVKMRF 474 (476)
Q Consensus 454 ~~t~e~i~~~~~~l~~~~~~~ 474 (476)
.++++++++++++|+++++++
T Consensus 374 ~~~~~~i~~~l~~L~~~~~~~ 394 (397)
T PRK06939 374 AHTKEQLDRAIDAFEKVGKEL 394 (397)
T ss_pred CCCHHHHHHHHHHHHHHHHHh
Confidence 689999999999999998764
No 100
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=100.00 E-value=2e-31 Score=237.60 Aligned_cols=337 Identities=20% Similarity=0.255 Sum_probs=255.3
Q ss_pred CeEEEeecCCEEEEcCC--CEEEecccChhhccCCC-CcHHHHHHHHHHHHh-cCCC------CCCCHHHHHHHHHHHhh
Q 011856 82 PIVFDSVKGSHMWDIDG--NEYIDYVGSWGPAIIGH-ADDQVLAALGETMKK-GTSF------GAPCLLENVLAEMVISA 151 (476)
Q Consensus 82 p~~~~~~~G~~~~d~dG--~~~iD~~~~~~~~~lG~-~~p~v~~a~~~~l~~-~~~~------~~~~~~~~~la~~l~~~ 151 (476)
..++.+.+|..+. ++| +++|+|++| ||||. +||+|.+|..++++. |... -++...+..|..+++++
T Consensus 49 erVi~s~q~p~i~-v~G~~k~ilnFcaN---nYLGLsshPeii~a~~~aleeyGaGlssvrfIcGtq~iHk~LE~kiAqf 124 (417)
T KOG1359|consen 49 ERVITSRQGPTIQ-VKGSDKKILNFCAN---NYLGLSSHPEIINAGQKALEEYGAGLSSVRFICGTQDIHKLLESKIAQF 124 (417)
T ss_pred eeEEeecccceEE-Eeccccceeeeccc---ccccccCChHHHHHHHHHHHHhCCCccceeEEecchHHHHHHHHHHHHH
Confidence 5688899999886 666 579999999 99999 699999999999987 3211 13567888999999998
Q ss_pred CCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCC
Q 011856 152 VPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFN 231 (476)
Q Consensus 152 ~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (476)
+ +.|+.++++|+.+||..++. +...+.+-|..|...|.+....+.+. .+..+-
T Consensus 125 h-~rED~ilypscfdANag~fe---ail~pedAvfSDeLNhASIIdGirLc-----------------------kry~h~ 177 (417)
T KOG1359|consen 125 H-GREDTILYPSCFDANAGAFE---AILTPEDAVFSDELNHASIIDGIRLC-----------------------KRYRHV 177 (417)
T ss_pred h-CCCceEEeccccccchHHHH---HhcChhhhhhccccccchhhhhhHHH-----------------------hhhccc
Confidence 8 78899999999999999998 44455555566777887543322211 122334
Q ss_pred CHHHHHHHHhc-CCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccc-cCc-cccccchhhccCC--C
Q 011856 232 DVSALENLFEN-NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM-TGF-RLAYGGAQEYFGV--T 306 (476)
Q Consensus 232 d~~~le~~l~~-~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~-~g~-r~g~~~~~~~~g~--~ 306 (476)
|+-++|..+.+ .+-+.++|+++.++++.|++.| |++|.+|++|||++|++||.| ||| .....+..|.+|+ +
T Consensus 178 dv~~l~~~l~~a~k~r~klv~TDg~FSMDGdiaP----l~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~ 253 (417)
T KOG1359|consen 178 DVFDLEHCLISACKMRLKLVVTDGVFSMDGDIAP----LEEISQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGD 253 (417)
T ss_pred hhHHHHHHHHHhhhheEEEEEecceeccCCCccc----HHHHHHHHHhcCcEEEEeecccceeecCCCCChHHHhCCCCc
Confidence 77777766653 2336889999999999999999 999999999999999999999 888 6656777888886 4
Q ss_pred Cchh--hhhhhcCCCCcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHH
Q 011856 307 PDLT--TLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQG 383 (476)
Q Consensus 307 pDi~--t~sK~lg~G~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~ 383 (476)
+|++ |+||++|| --.||..++.++++.+++..+.+.+++ +.+|.....+.++++.+-. .....+.+.+.+++++.
T Consensus 254 vdiinsTLgKAlGg-a~GGyttgp~~li~llrqr~RpylFSn-slppavV~~a~ka~dllm~s~~~i~~~~a~~qrfr~~ 331 (417)
T KOG1359|consen 254 VDIINSTLGKALGG-ASGGYTTGPKPLISLLRQRSRPYLFSN-SLPPAVVGMAAKAYDLLMVSSKEIQSRQANTQRFREF 331 (417)
T ss_pred ceehhhhhhhhhcC-CCCCCccCChhHHHHHHhcCCceeecC-CCChhhhhhhHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 6665 89999984 246778999999999988777777665 5566566666777776554 77888889999999988
Q ss_pred HHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCCcce---------EEeCC
Q 011856 384 IIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAG---------FTSLA 454 (476)
Q Consensus 384 L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~---------~~~~~ 454 (476)
++..+....- ....+..+. ..|...+..+++.|+++|+++....++.+ .++..
T Consensus 332 me~aGftIsg-----~~hPI~pv~-------------lGda~lA~~~ad~lLk~Gi~Vigfs~PvVP~gkariRVqiSAa 393 (417)
T KOG1359|consen 332 MEAAGFTISG-----ASHPICPVM-------------LGDARLASKMADELLKRGIYVIGFSYPVVPKGKARIRVQISAA 393 (417)
T ss_pred HHhcCceecC-----CCCCcccee-------------cccHHHHHHHHHHHHhcCceEEeecCCcCCCCceEEEEEEehh
Confidence 8765322110 001122222 24667788999999999999877665532 45899
Q ss_pred CcHHHHHHHHHHHHHHHHH
Q 011856 455 HSSDDIQHTITAAEKVKMR 473 (476)
Q Consensus 455 ~t~e~i~~~~~~l~~~~~~ 473 (476)
||+||||++++++.++.+.
T Consensus 394 Ht~edid~~i~Af~~vgr~ 412 (417)
T KOG1359|consen 394 HTEEDIDRLIEAFSEVGRF 412 (417)
T ss_pred cCHHHHHHHHHHHHHHHHh
Confidence 9999999999999988753
No 101
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=100.00 E-value=3e-30 Score=260.14 Aligned_cols=328 Identities=19% Similarity=0.211 Sum_probs=235.4
Q ss_pred CCCEEEecccChhhccCCC-CcHHHHHHHHHHHHhc-CC------CCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHH
Q 011856 97 DGNEYIDYVGSWGPAIIGH-ADDQVLAALGETMKKG-TS------FGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEAC 168 (476)
Q Consensus 97 dG~~~iD~~~~~~~~~lG~-~~p~v~~a~~~~l~~~-~~------~~~~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~ 168 (476)
+|+++++|.++ +|+|. +||++++++.+++++. .. +....+...+|+++++++++ .+..++++||++|+
T Consensus 44 ~~~~~~~~~sn---~yl~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~g-~~~~i~~~sG~~a~ 119 (410)
T PRK13392 44 GPRRVTIWCSN---DYLGMGQHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLHG-KESALLFTSGYVSN 119 (410)
T ss_pred CCceEEEEECC---CccCCCCCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHhC-CCCEEEECcHHHHH
Confidence 57899999998 99999 6999999999999873 21 11233467799999999996 46777888899999
Q ss_pred HHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCC-CCe
Q 011856 169 MGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK-GEI 247 (476)
Q Consensus 169 ~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~-~~~ 247 (476)
..+++..... .++++|+.+..+|+.....+...|. ++..++++|.+++++.++... +++
T Consensus 120 ~~~i~~l~~~-~~g~~vi~~~~~h~s~~~~~~~~g~-------------------~~~~~~~~d~~~l~~~l~~~~~~~t 179 (410)
T PRK13392 120 DAALSTLGKL-LPGCVILSDALNHASMIEGIRRSGA-------------------EKQVFRHNDLADLEEQLASVDPDRP 179 (410)
T ss_pred HHHHHHHhcC-CCCCEEEEehhhhHHHHHHHHHcCC-------------------eEEEEeCCCHHHHHHHHHhccCCCC
Confidence 9999843211 2235666677788766544433332 233446678888888886532 367
Q ss_pred EEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-Cc--cccccchhhccCC--CCchh--hhhhhcCCCC
Q 011856 248 AAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GF--RLAYGGAQEYFGV--TPDLT--TLGKIIGGGL 320 (476)
Q Consensus 248 a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~--r~g~~~~~~~~g~--~pDi~--t~sK~lg~G~ 320 (476)
++|+++++++++|.+.+ +++|.++|++||++||+||+|+ |+ ..|.. ..++.++ .+|++ ||||++|.
T Consensus 180 ~~v~i~~~~n~tG~~~~----l~~i~~l~~~~~~~livDea~~~g~~g~~g~g-~~~~~~~~~~~div~~tlsK~~g~-- 252 (410)
T PRK13392 180 KLIAFESVYSMDGDIAP----IEAICDLADRYNALTYVDEVHAVGLYGARGGG-IAERDGLMDRIDMIQGTLAKAFGC-- 252 (410)
T ss_pred EEEEEeCCCCCCccccc----HHHHHHHHHHcCCEEEEECCccccCcCCCCCc-hhhhccCCCCCcEEEEEChHhhhc--
Confidence 89999999999999998 9999999999999999999996 65 33332 2344454 35666 89999973
Q ss_pred cEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHhhhcCCceEeee
Q 011856 321 PVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGY 399 (476)
Q Consensus 321 ~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~ 399 (476)
+.||+++++++++.++.....+.+ +.+.+|+.++++.++|+.++. ....++++++.+++++.|++++. .+ .++
T Consensus 253 ~GG~~~~~~~~~~~l~~~~~~~~~-s~~~~~~~~~a~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~g~--~~---~~~ 326 (410)
T PRK13392 253 LGGYIAASADLIDFVRSFAPGFIF-TTALPPAVAAGATAAIRHLKTSQTERDAHQDRVAALKAKLNANGI--PV---MPS 326 (410)
T ss_pred ccchhhcCHHHHHHHHHhCcchhc-cCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcCC--CC---CCC
Confidence 337888899999877643333333 445678889999999998765 44556778888888888887532 21 134
Q ss_pred eceeEEEEEecCCCcCchhhcccchHHHHHHHHHHH-HCCeEeccCCC-------cceEEe--CCCcHHHHHHHHHHHHH
Q 011856 400 ISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQF-------EAGFTS--LAHSSDDIQHTITAAEK 469 (476)
Q Consensus 400 ~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~~-------~~~~~~--~~~t~e~i~~~~~~l~~ 469 (476)
.+.++.+.+. +.....++.+.|+ ++||++.+..+ ..+|++ +.+|++|+|+++++|++
T Consensus 327 ~~~~~~i~~~-------------~~~~~~~~~~~L~~~~GI~v~~~~~p~~~~~~~~lRis~~~~~t~edid~l~~aL~~ 393 (410)
T PRK13392 327 PSHIVPVMVG-------------DPTLCKAISDRLMSEHGIYIQPINYPTVPRGTERLRITPTPLHDDEDIDALVAALVA 393 (410)
T ss_pred CCCEEEEEeC-------------CHHHHHHHHHHHHHhCCEEEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHH
Confidence 5556555442 1123457888887 67999987532 246664 57999999999999999
Q ss_pred HHHHh
Q 011856 470 VKMRF 474 (476)
Q Consensus 470 ~~~~~ 474 (476)
+++++
T Consensus 394 ~~~~~ 398 (410)
T PRK13392 394 IWDRL 398 (410)
T ss_pred HHHHc
Confidence 88764
No 102
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.97 E-value=8.9e-29 Score=245.58 Aligned_cols=332 Identities=20% Similarity=0.273 Sum_probs=232.1
Q ss_pred EEeecCCEEEEcCCCEEEecccChhhccCCC-CcHHHHHHHHHHHHh-cCCC------CCCCHHHHHHHHHHHhhCCCCC
Q 011856 85 FDSVKGSHMWDIDGNEYIDYVGSWGPAIIGH-ADDQVLAALGETMKK-GTSF------GAPCLLENVLAEMVISAVPSIE 156 (476)
Q Consensus 85 ~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~-~~p~v~~a~~~~l~~-~~~~------~~~~~~~~~la~~l~~~~~~~e 156 (476)
.+++.|.++. .+|++||||.+| +++|+ .+|++.+++.+++.+ +..+ ....+...++++.+++++. .+
T Consensus 3 ~~~~~~~~~~-~~g~~~id~~~~---~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~-~~ 77 (360)
T TIGR00858 3 LDRGPGPEVV-RDGRRLLNFSSN---DYLGLASHPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWKG-TE 77 (360)
T ss_pred cccCCCCeEE-ECCceEEecccC---CcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhC-CC
Confidence 4578999997 899999999998 78997 789999999999876 2211 1124667789999998884 34
Q ss_pred eEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHH
Q 011856 157 MVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSAL 236 (476)
Q Consensus 157 ~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l 236 (476)
..+++++|++++..+++. +.++++.|+....+|......+...+. ++..++..|+++|
T Consensus 78 ~~i~~~~G~~~~~~~l~~---~~~~gd~v~~~~~~~~~~~~~~~~~g~-------------------~~~~~~~~d~~~l 135 (360)
T TIGR00858 78 AALLFSSGYLANVGVISA---LVGKGDLILSDALNHASLIDGCRLSGA-------------------RVRRYRHNDVEHL 135 (360)
T ss_pred CEEEECchHHHHHHHHHH---hCCCCCEEEEEccccHHHHHHHHhcCC-------------------ceEEecCCCHHHH
Confidence 556666788998887763 334444444445555554444433332 2334455689999
Q ss_pred HHHHhcCC-CCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccc-c-cchhhccCCCCc-----
Q 011856 237 ENLFENNK-GEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLA-Y-GGAQEYFGVTPD----- 308 (476)
Q Consensus 237 e~~l~~~~-~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g-~-~~~~~~~g~~pD----- 308 (476)
++.++++. .++++|+++++++++|.+.+ +++|.++|++||++||+||+|+.+..+ . ......+++.++
T Consensus 136 ~~~~~~~~~~~~~~v~~~~~~~~~G~~~~----~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 211 (360)
T TIGR00858 136 ERLLEKNRGERRKLIVTDGVFSMDGDIAP----LPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQ 211 (360)
T ss_pred HHHHHHcccCCCeEEEEeCCccCCCCCcC----HHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEE
Confidence 99997543 35788899999888898888 999999999999999999999633221 1 222344555544
Q ss_pred hhhhhhhcCCCCcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHH
Q 011856 309 LTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDA 387 (476)
Q Consensus 309 i~t~sK~lg~G~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~ 387 (476)
+.++||++++ +.||+++++++++.+....... ..+.+.++..++++.++++.+.. ++..++++++.+++.+.|+++
T Consensus 212 i~s~sK~~~~--~gG~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~ 288 (360)
T TIGR00858 212 VGTLSKALGS--YGAYVAGSQALIDYLINRARTL-IFSTALPPAVAAAALAALELIQEEPWRREKLLALIARLRAGLEAL 288 (360)
T ss_pred EEechhhhhc--cCcEEEcCHHHHHHHHHhCccc-eecCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHc
Confidence 4489999985 4489999999988775322211 12234567778888889987655 467788899999999998874
Q ss_pred hhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCC-------CcceEEeC--CCcHH
Q 011856 388 GKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ-------FEAGFTSL--AHSSD 458 (476)
Q Consensus 388 ~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~-------~~~~~~~~--~~t~e 458 (476)
. ..+ ....+.++++.+.. .....++++.|+++||++.++. ...+|+++ .++++
T Consensus 289 ~--~~~---~~~~~~~~~~~~~~-------------~~~~~~~~~~l~~~gI~v~~~~~~~~~~~~~~iRis~~~~~~~~ 350 (360)
T TIGR00858 289 G--FTL---MPSCTPIVPVIIGD-------------NASALALAEELQQQGIFVGAIRPPTVPAGTSRLRLTLSAAHTPG 350 (360)
T ss_pred C--Ccc---CCCCCCEEEEEeCC-------------HHHHHHHHHHHHHCCeeEeeeCCCCCCCCCceEEEEEcCCCCHH
Confidence 2 111 23456677777632 1223578899999999997532 23567754 46999
Q ss_pred HHHHHHHHHH
Q 011856 459 DIQHTITAAE 468 (476)
Q Consensus 459 ~i~~~~~~l~ 468 (476)
|+++++++|+
T Consensus 351 ~i~~~l~~l~ 360 (360)
T TIGR00858 351 DIDRLAEALK 360 (360)
T ss_pred HHHHHHHhhC
Confidence 9999999874
No 103
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.97 E-value=3.3e-29 Score=231.97 Aligned_cols=321 Identities=17% Similarity=0.169 Sum_probs=245.4
Q ss_pred ccChhhccCCC-CcHHHHHHHHHHHHh-cCCC------CCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHH
Q 011856 105 VGSWGPAIIGH-ADDQVLAALGETMKK-GTSF------GAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLAR 176 (476)
Q Consensus 105 ~~~~~~~~lG~-~~p~v~~a~~~~l~~-~~~~------~~~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar 176 (476)
++| +|||. .||+|.+|+.+.+++ |... .+++....+|.+.|++++ ..|..++++|+.-||+..+...
T Consensus 177 CSN---DYLgms~Hp~V~~A~~~tl~~hG~GAGGTRNIsG~s~~hv~LE~eLA~LH-qK~aALlFsSCfVANDstLftL- 251 (570)
T KOG1360|consen 177 CSN---DYLGMSRHPEVLDAMHDTLDRHGAGAGGTRNISGHSKHHVRLEAELADLH-QKEAALLFSSCFVANDSTLFTL- 251 (570)
T ss_pred ecC---ccccccCChHHHHHHHHHHHHcCCCcCCccccCCCCchhhhHHHHHHHHh-cCcceeeeeeeeeccchHHHHH-
Confidence 677 89999 599999999999998 3222 246777888888888888 6788888899999999988743
Q ss_pred hccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCC-eEEEEEccc
Q 011856 177 AFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGE-IAAIILEPV 255 (476)
Q Consensus 177 ~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~-~a~vi~ep~ 255 (476)
+-.-++.+|..|...|.+....+..+ ..+.+.+.|||+++|+++|+..+.. .+.|-.|.+
T Consensus 252 ak~lpgcei~SD~gNHASMI~GIrns-------------------~v~K~IFrHND~~hL~~lL~~~~~svPKivAFEtV 312 (570)
T KOG1360|consen 252 AKKLPGCEIFSDEGNHASMIQGIRNS-------------------RVPKHIFRHNDLDHLEQLLQSSPKSVPKIVAFETV 312 (570)
T ss_pred HHHCCCcEEeccccchHHHHHHhhhc-------------------CCcceeeccCCHHHHHHHHHhCCCCCCceEEEeee
Confidence 11235567777888888654443222 2246788999999999999876544 577888999
Q ss_pred CCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccc-cCc-cccccchhhccCC--CCchh--hhhhhcCCCCcEEEEEecH
Q 011856 256 VGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM-TGF-RLAYGGAQEYFGV--TPDLT--TLGKIIGGGLPVGAYGGRR 329 (476)
Q Consensus 256 ~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~-~g~-r~g~~~~~~~~g~--~pDi~--t~sK~lg~G~~iG~~~~~~ 329 (476)
+++.|.+.| |++|++++++||++-.+|||| .|+ +..+.+.-++-|+ +.||+ |++|+||. -.||+.++.
T Consensus 313 hSM~Gavcp----leelcDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsGTLgKafGc--VGGYIAat~ 386 (570)
T KOG1360|consen 313 HSMDGAVCP----LEELCDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISGTLGKAFGC--VGGYIAATR 386 (570)
T ss_pred eccCCCcCC----HHHHHHHHHHhCceeeeehhhhhccccCCCCCccccCCcchhhhhcccchhhhccc--ccceehhhh
Confidence 999999999 999999999999999999999 687 5544555677777 45787 79999986 346678889
Q ss_pred HHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEE
Q 011856 330 DIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGF 406 (476)
Q Consensus 330 ~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i 406 (476)
.+++.++...+.+++.| +.+|..++.|++++++++. ..++..-+++..++++.|.+++ +|++ +....++.+
T Consensus 387 ~LvDmiRSyAaGFIFTT-SLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~~G--iPVi---~~pSHIiPv 460 (570)
T KOG1360|consen 387 KLVDMIRSYAAGFIFTT-SLPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLMELG--IPVI---PNPSHIIPV 460 (570)
T ss_pred hHHHHHHHhcCceEEec-CCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHcC--Cccc---CCCcceeee
Confidence 99999997777888865 8899999999999998875 3466667778888888887763 2322 122223333
Q ss_pred EEecCCCcCchhhcccchHHHHHHHHHHH-HCCeEeccCCCcc-------eEE--eCCCcHHHHHHHHHHHHHHHHHh
Q 011856 407 FFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQFEA-------GFT--SLAHSSDDIQHTITAAEKVKMRF 474 (476)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~~~~-------~~~--~~~~t~e~i~~~~~~l~~~~~~~ 474 (476)
.+ .+.....++...|+ ++||++....++. +|+ ...||++.++.+++.+..++.++
T Consensus 461 ~v-------------gda~l~~~~sd~Li~~h~iYvQaINyPTV~rG~E~LRiaPTP~HT~~mm~~lv~~l~~vw~~v 525 (570)
T KOG1360|consen 461 RV-------------GDAALAKQASDILISKHNIYVQAINYPTVARGTERLRIAPTPHHTPQMMNILVNALLDVWNEV 525 (570)
T ss_pred ec-------------cCHHHHHHHHHHHHHhcCeEEEeccCCcccccceeeecCCCCCCCHHHHHHHHHHHHHHHHHc
Confidence 33 35566677777776 6799998776554 355 57889999999999999998875
No 104
>PLN02483 serine palmitoyltransferase
Probab=99.97 E-value=2.1e-27 Score=242.36 Aligned_cols=329 Identities=19% Similarity=0.238 Sum_probs=228.0
Q ss_pred cCCCEEEecccChhhccCCCC--cHHHHHHHHHHHHh-cCCC------CCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHH
Q 011856 96 IDGNEYIDYVGSWGPAIIGHA--DDQVLAALGETMKK-GTSF------GAPCLLENVLAEMVISAVPSIEMVRFVNSGTE 166 (476)
Q Consensus 96 ~dG~~~iD~~~~~~~~~lG~~--~p~v~~a~~~~l~~-~~~~------~~~~~~~~~la~~l~~~~~~~e~v~~~~sGse 166 (476)
.+++++|||.++ +|||.+ ++.+.+++.+++++ +... +.+.....++.+.++++++ .+..+++++|+.
T Consensus 97 ~~~~~~~n~~s~---~YLgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~g-~~~ai~~~~G~~ 172 (489)
T PLN02483 97 TKTRRCLNLGSY---NYLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFVG-KPAAIVFGMGYA 172 (489)
T ss_pred CCCceEEEeecC---CccCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHhC-CCcEEEECCHHH
Confidence 467899999999 999995 57788888888876 3211 2357788899999999985 455666677999
Q ss_pred HHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcC---
Q 011856 167 ACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN--- 243 (476)
Q Consensus 167 A~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~--- 243 (476)
++..++.. +.++++.|+.+...|......+...|. .+..++++|++++++.+++.
T Consensus 173 an~~~i~a---l~~~Gd~Vi~d~~~h~s~~~~~~~~Ga-------------------~v~~~~~~d~~~le~~l~~~i~~ 230 (489)
T PLN02483 173 TNSTIIPA---LIGKGGLIISDSLNHNSIVNGARGSGA-------------------TIRVFQHNTPSHLEEVLREQIAE 230 (489)
T ss_pred HHHHHHHH---hCCCCCEEEEcchhhHHHHHHHHHcCC-------------------eEEEEeCCCHHHHHHHHHhhhhc
Confidence 99887773 344444455555555544444333332 46677888999998887631
Q ss_pred -------CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-Cc-cccccchhhccCCCC---chh-
Q 011856 244 -------KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GF-RLAYGGAQEYFGVTP---DLT- 310 (476)
Q Consensus 244 -------~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~-r~g~~~~~~~~g~~p---Di~- 310 (476)
+....+|++|+++++.|.+.+ +++|.++|++||++||+||+|+ |. +....+..+++++.| |++
T Consensus 231 ~~p~t~~p~~k~livve~v~s~~G~~~~----l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~ 306 (489)
T PLN02483 231 GQPRTHRPWKKIIVIVEGIYSMEGELCK----LPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMM 306 (489)
T ss_pred cccccccCCceEEEEECCCCCCCCcccC----HHHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCCCcccCcEEE
Confidence 112358888999999999998 9999999999999999999995 33 222233556777654 555
Q ss_pred -hhhhhcCCCCcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCC-------CHHHHHHHHHHHHHH
Q 011856 311 -TLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEP-------GTYEYLNKITGELTQ 382 (476)
Q Consensus 311 -t~sK~lg~G~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~-------~~~~~~~~~~~~l~~ 382 (476)
||||++|+ +.||+++++++++.++.......+++ +.+|..++++.++|+.+..+ +..++++++.+++++
T Consensus 307 ~SfSKs~g~--~GG~i~~~~~li~~l~~~~~~~~~~~-~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~ 383 (489)
T PLN02483 307 GTFTKSFGS--CGGYIAGSKELIQYLKRTCPAHLYAT-SMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFFRS 383 (489)
T ss_pred Eecchhccc--CceEEEcCHHHHHHHHHhCccccccC-CcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHH
Confidence 89999984 35899999999999874222111222 34667777788888876421 346678888888888
Q ss_pred HHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCC-------cceEE--eC
Q 011856 383 GIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-------EAGFT--SL 453 (476)
Q Consensus 383 ~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~-------~~~~~--~~ 453 (476)
.|++++ +.......+.++++.+.. .....++.+.|+++||.+.+.++ ..+|+ +.
T Consensus 384 ~L~~~G----~~v~~~~~sp~~~l~l~~-------------~~~~~~~~~~Ll~~GI~v~~~~fp~~p~~~~~vRi~isa 446 (489)
T PLN02483 384 ELQKMG----FEVLGDNDSPVMPIMLYN-------------PAKIPAFSRECLKQNVAVVVVGFPATPLLLARARICISA 446 (489)
T ss_pred HHHHCC----CcccCCCCCCEEEEEECC-------------HHHHHHHHHHHHHCCcEEeeeCCCCCCCCCceEEEEeCC
Confidence 888752 211111223455555421 12345788999999999986543 23454 56
Q ss_pred CCcHHHHHHHHHHHHHHHHHh
Q 011856 454 AHSSDDIQHTITAAEKVKMRF 474 (476)
Q Consensus 454 ~~t~e~i~~~~~~l~~~~~~~ 474 (476)
.+|+|||++++++|+++++.+
T Consensus 447 ~~t~edId~~l~~L~~~~~~~ 467 (489)
T PLN02483 447 SHSREDLIKALEVISEVGDLV 467 (489)
T ss_pred CCCHHHHHHHHHHHHHHHHHh
Confidence 789999999999999987754
No 105
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.97 E-value=4.6e-28 Score=239.93 Aligned_cols=335 Identities=18% Similarity=0.179 Sum_probs=231.6
Q ss_pred CEEEecccChhhccCCCCcHHHHHHHHHHHHhcC-CCC---CCCHHHHHHHHHHHhhCC---CCCe-EEEeCCHHHHHHH
Q 011856 99 NEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT-SFG---APCLLENVLAEMVISAVP---SIEM-VRFVNSGTEACMG 170 (476)
Q Consensus 99 ~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~-~~~---~~~~~~~~la~~l~~~~~---~~e~-v~~~~sGseA~~~ 170 (476)
..+||+..| .+--..++.+.+++.+++.++. +|+ +..++++.+++++.+.++ .+++ |++|+|+++|+..
T Consensus 28 ~~vi~l~iG---~Pd~~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al~~ 104 (393)
T COG0436 28 EDVIDLSIG---EPDFPTPEHIIEAAIEALEEGGTHYTPSAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEALFL 104 (393)
T ss_pred CCEEEeCCC---CCCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHHHH
Confidence 357787777 5544578899999999998863 333 234667777777777764 3444 9999999999999
Q ss_pred HHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCC-CCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEE
Q 011856 171 VLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDS-PGVPKGATYETLTAPFNDVSALENLFENNKGEIAA 249 (476)
Q Consensus 171 al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~ 249 (476)
++.. ...+++.||+.++.|-.+........+. +...++... .++. -|++.|++.++. ++++
T Consensus 105 ~~~a--~~~pGDeVlip~P~Y~~y~~~~~~~gg~-~v~v~l~~~~~~f~------------~d~~~l~~~i~~---ktk~ 166 (393)
T COG0436 105 AFLA--LLNPGDEVLIPDPGYPSYEAAVKLAGGK-PVPVPLDEEENGFK------------PDLEDLEAAITP---KTKA 166 (393)
T ss_pred HHHH--hcCCCCEEEEeCCCCcCHHHHHHhcCCE-EEEEeCCcCccCCc------------CCHHHHHhhcCc---cceE
Confidence 9984 3456678999999998755444444343 222221000 1111 179999999985 6778
Q ss_pred EEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccc-c-chhhccCC---CCchhhhhhhcC-CCCcE
Q 011856 250 IILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAY-G-GAQEYFGV---TPDLTTLGKIIG-GGLPV 322 (476)
Q Consensus 250 vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~-~-~~~~~~g~---~pDi~t~sK~lg-~G~~i 322 (476)
|+++..+|++|.+.+. ++|++|.++|++||++||+||+|.+| ..+. . ...+..+. ..-+-+|||.++ .|||+
T Consensus 167 i~ln~P~NPTGav~~~-~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRv 245 (393)
T COG0436 167 IILNSPNNPTGAVYSK-EELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGWRI 245 (393)
T ss_pred EEEeCCCCCcCcCCCH-HHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcceEEEEecccccccccccce
Confidence 8887777778877654 45999999999999999999999999 7663 2 22222221 112337999999 89999
Q ss_pred EEEEec-HHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC----CCHHHHHHHHHHHHHHHHHHHhhhcCCceEe
Q 011856 323 GAYGGR-RDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE----PGTYEYLNKITGELTQGIIDAGKKAGHAICG 397 (476)
Q Consensus 323 G~~~~~-~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~----~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v 397 (476)
||++++ +++++.+. ......+++.+.++|.++.++|+.-++ +...+.++++++.+.+.|.++. ++....
T Consensus 246 G~~v~~~~~l~~~~~---~~~~~~~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~~~---g~~~~~ 319 (393)
T COG0436 246 GWVVGPPEELIAALR---KLKSYLTSCAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNEIG---GLSVVK 319 (393)
T ss_pred eEeecChHHHHHHHH---HHHHhcccCCCHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHhcC---Ceeecc
Confidence 999998 88888776 344556778899999999999974421 2233456666666666666542 122222
Q ss_pred ee-eceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHH-CCeEeccCC-------CcceEEeCCCcHHHHHHHHHHHH
Q 011856 398 GY-ISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLE-EGVYFAPSQ-------FEAGFTSLAHSSDDIQHTITAAE 468 (476)
Q Consensus 398 ~~-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~~-------~~~~~~~~~~t~e~i~~~~~~l~ 468 (476)
.. .+.++++.+... ....+|+..|++ .||.+.|+. .+++|+++..+++++++++++++
T Consensus 320 ~p~Ga~Y~~~~i~~~-------------~d~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis~~~~~~~l~~a~~rl~ 386 (393)
T COG0436 320 PPEGAFYLFPKIPEL-------------LDSEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRLSLATSEETLEEALRRLA 386 (393)
T ss_pred CCCeeEEEEeecCCC-------------CCHHHHHHHHHHhCCEEEecccccCCCCCCCeEEEEEecCHHHHHHHHHHHH
Confidence 13 444445544321 113577877775 589999962 24689999999999999999999
Q ss_pred HHHHHh
Q 011856 469 KVKMRF 474 (476)
Q Consensus 469 ~~~~~~ 474 (476)
+.+...
T Consensus 387 ~~~~~~ 392 (393)
T COG0436 387 RFLAEY 392 (393)
T ss_pred HHHHhc
Confidence 988753
No 106
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.96 E-value=7.2e-27 Score=233.33 Aligned_cols=337 Identities=17% Similarity=0.141 Sum_probs=222.7
Q ss_pred CCEEEecccChhhccCCCCcHHHHHHHHHHHHhcCCCCCC-CHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHH
Q 011856 98 GNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAP-CLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLA 175 (476)
Q Consensus 98 G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~~~~-~~~~~~la~~l~~~~~-~~e~v~~~~sGseA~~~al~~a 175 (476)
+.++||+..+. +.++ .++.+.+++.+.+..+....|+ .....++.+.++++++ ..+++++++|+++++..+++..
T Consensus 27 ~~~~i~l~~~~--~~~~-~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~v~~~~g~t~al~~~~~~~ 103 (380)
T PRK06225 27 DKEMIWMGQNT--NHLG-PHEEVREAMIRCIEEGEYCKYPPPEGFPELRELILKDLGLDDDEALITAGATESLYLVMRAF 103 (380)
T ss_pred cCCeEEccCCC--CCCC-CCHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHhcCCCCCcEEEeCCHHHHHHHHHHHh
Confidence 45678877663 4444 6899999999988764222232 3345678888888876 5679999999999999999852
Q ss_pred HhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCC-CCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcc
Q 011856 176 RAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP-GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEP 254 (476)
Q Consensus 176 r~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep 254 (476)
...++.|++.+++|+.. ...+...|..+...+..... +. .-|++++++.+.. +++++++..
T Consensus 104 --~~~gd~vl~~~p~y~~~-~~~~~~~g~~~~~v~~~~~~~~~------------~~d~~~l~~~~~~---~~~~v~l~~ 165 (380)
T PRK06225 104 --LSPGDNAVTPDPGYLII-DNFASRFGAEVIEVPIYSEECNY------------KLTPELVKENMDE---NTRLIYLID 165 (380)
T ss_pred --cCCCCEEEEcCCCCcch-HHHHHHhCceEEeeccccccCCc------------cCCHHHHHhhcCC---CceEEEEeC
Confidence 23456788888888753 34444445543332211000 00 0178889888763 455555443
Q ss_pred cCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCccccccchhhc-cCCCCchhhhhhhcC-CCCcEEEEEecHHHH
Q 011856 255 VVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEY-FGVTPDLTTLGKIIG-GGLPVGAYGGRRDIM 332 (476)
Q Consensus 255 ~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~-~g~~pDi~t~sK~lg-~G~~iG~~~~~~~i~ 332 (476)
.++++|.+.+ .+.+++|.++|++||+++|+||+|.+|..+....... .....++.+|||.+| +|+|+||++++++++
T Consensus 166 p~NptG~~~~-~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~i~~~s~SK~~g~~G~RiG~i~~~~~l~ 244 (380)
T PRK06225 166 PLNPLGSSYT-EEEIKEFAEIARDNDAFLLHDCTYRDFAREHTLAAEYAPEHTVTSYSFSKIFGMAGLRIGAVVATPDLI 244 (380)
T ss_pred CCCCCCcCCC-HHHHHHHHHHHHHCCcEEEEehhHHHHhccCCchhhcCCCCEEEEeechhhcCCccceeEEEecCHHHH
Confidence 3556777765 4459999999999999999999998772221111111 011223558999998 799999999999999
Q ss_pred HhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhc-CC-ceEeeeeceeEEEEEec
Q 011856 333 EMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKA-GH-AICGGYISGMFGFFFTE 410 (476)
Q Consensus 333 ~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~-~~~v~~~g~~~~i~~~~ 410 (476)
+.+... ...+++.|.+++.++.++|+.. +++.+++++..+..++.+.+...++ +. ....+..|.++++.+..
T Consensus 245 ~~~~~~----~~~~~~~~~~~~~~a~~~l~~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~ 318 (380)
T PRK06225 245 EVVKSI----VINDLGTNVIAQEAAIAGLKVK--DEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYPSHGNMMVIDISE 318 (380)
T ss_pred HHHHHH----HhcccCCCHHHHHHHHHHHhcc--hHHHHHHHHHHHHHHHHHHHHHHhCcCCccccCCCCCeEEEEEccc
Confidence 887631 2245677888888888877632 3444555444444344444333332 21 12234567888888743
Q ss_pred CCCcCchhhcccchHHHHHHHHHHHHCCeEeccCC-------CcceEEeCCCcHHHHHHHHHHHHHHHHHh
Q 011856 411 GPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ-------FEAGFTSLAHSSDDIQHTITAAEKVKMRF 474 (476)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~-------~~~~~~~~~~t~e~i~~~~~~l~~~~~~~ 474 (476)
... ...++.+.|.++||.+.++. ...+|+++..+++++++++++|+++++++
T Consensus 319 ~~~------------~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~iR~s~~~~~e~l~~~~~~l~~~~~~~ 377 (380)
T PRK06225 319 AGI------------DPEDLVEYLLERKIFVRQGTYTSKRFGDRYIRVSFSIPREQVEVFCEEFPDVVETL 377 (380)
T ss_pred ccC------------CHHHHHHHHHHCCEEEcCCcccCcCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHh
Confidence 211 12568888889999998852 23678888889999999999999998764
No 107
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.96 E-value=1e-26 Score=230.98 Aligned_cols=318 Identities=17% Similarity=0.174 Sum_probs=220.8
Q ss_pred CCEEEecccChhhccCCC-CcHHHHHHHHHHHHhc--------CCCC------CCCHHHHHHHHHHHhhCCCCCeEEEeC
Q 011856 98 GNEYIDYVGSWGPAIIGH-ADDQVLAALGETMKKG--------TSFG------APCLLENVLAEMVISAVPSIEMVRFVN 162 (476)
Q Consensus 98 G~~~iD~~~~~~~~~lG~-~~p~v~~a~~~~l~~~--------~~~~------~~~~~~~~la~~l~~~~~~~e~v~~~~ 162 (476)
..+++||.++ +|||+ .+|.+.+++.+++.+. .+.+ ...+...++.+.+++++ +.+.+++++
T Consensus 3 ~~~~~~~~s~---~YL~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~-~~~~~l~~~ 78 (370)
T PRK05937 3 ESLSIDFVTN---DFLGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFH-GAPEAFIVP 78 (370)
T ss_pred CCceEEeECC---CccCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHh-CCCeEEEEC
Confidence 3468999999 99999 5999999999988763 2221 14577889999999988 456778899
Q ss_pred CHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhc
Q 011856 163 SGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFEN 242 (476)
Q Consensus 163 sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~ 242 (476)
||+.|+...+. .+.+++++|+.+..+|++....+.... + ....++++|+++|+++++.
T Consensus 79 sG~~a~~~~~~---~~~~~~d~ii~d~~~H~sv~~~~~~~~------------~-------~~~~~~~~d~~~l~~~l~~ 136 (370)
T PRK05937 79 SGYMANLGLCA---HLSSVTDYVLWDEQVHISVVYSLSVIS------------G-------WHQSFRHNDLDHLESLLES 136 (370)
T ss_pred ChHHHHHHHHH---HhCCCCCEEEEEhhhhHHHHHHHHHcC------------C-------ceEEecCCCHHHHHHHHHh
Confidence 99999976544 455677899999999987766554321 1 1345678899999999974
Q ss_pred CC---CCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-Cc--cccccchhhccC---CCCchhhhh
Q 011856 243 NK---GEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GF--RLAYGGAQEYFG---VTPDLTTLG 313 (476)
Q Consensus 243 ~~---~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~--r~g~~~~~~~~g---~~pDi~t~s 313 (476)
.. +++.+|+++++++++|.+.| +++|.++|+++|++||+||+|+ |. ..+..+. ..++ ..+|+.|||
T Consensus 137 ~~~~~~~~~~v~v~~v~s~~G~i~p----l~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~-~~~~~~~~~~~~~tls 211 (370)
T PRK05937 137 CRQRSFGRIFIFVCSVYSFKGTLAP----LEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFC-HSLGYENFYAVLVTYS 211 (370)
T ss_pred hhccCCCcEEEEEecCCCCCCCccC----HHHHHHHHHHcCCEEEEECCccccccCCCCCchH-HhhCCCCCcEEEEech
Confidence 31 34567889999999999999 9999999999999999999995 54 4443222 2223 235678999
Q ss_pred hhcCCCCcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHhhhc
Q 011856 314 KIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEP--GTYEYLNKITGELTQGIIDAGKKA 391 (476)
Q Consensus 314 K~lg~G~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~--~~~~~~~~~~~~l~~~L~~~~~~~ 391 (476)
|++|+ +.+++++.+++.+.+......+.+ +.+.++++++++.++++.+.+. ...++++++.+++++.|...
T Consensus 212 K~~g~--~G~~vl~~~~~~~~~~~~~~~~~~-s~~~~~~~~~a~~aal~~l~~~~~~~~~~l~~l~~~l~~~l~~~---- 284 (370)
T PRK05937 212 KALGS--MGAALLSSSEVKQDLMLNSPPLRY-STGLPPHLLISIQVAYDFLSQEGELARKQLFRLKEYFAQKFSSA---- 284 (370)
T ss_pred hhhhc--CceEEEcCHHHHHHHHHhCCCCee-cCCCCHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCC----
Confidence 99984 234456667765554421122222 3356788888888999888652 34556666666666554321
Q ss_pred CCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCC---CcceEEe--CCCcHHHHHHHHHH
Q 011856 392 GHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ---FEAGFTS--LAHSSDDIQHTITA 466 (476)
Q Consensus 392 ~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~---~~~~~~~--~~~t~e~i~~~~~~ 466 (476)
. .+....+.+.. .....+.+.|.++||++.... .+.+|++ ..+|++|+|++++.
T Consensus 285 ~-------~~~~~~i~~~~--------------~~~~~~~~~L~~~gi~v~~~~~~~~~~iRis~~~~~t~edid~l~~~ 343 (370)
T PRK05937 285 A-------PGCVQPIFLPG--------------ISEQELYSKLVETGIRVGVVCFPTGPFLRVNLHAFNTEDEVDILVSV 343 (370)
T ss_pred C-------CCCEEEEEeCC--------------hhHHHHHHHHHHCCeeEEeeCCCCCCEEEEEcCCCCCHHHHHHHHHH
Confidence 0 11122233321 112567888899999887432 2346775 56899999999999
Q ss_pred HHHHHHHh
Q 011856 467 AEKVKMRF 474 (476)
Q Consensus 467 l~~~~~~~ 474 (476)
|+++++++
T Consensus 344 L~~~~~~~ 351 (370)
T PRK05937 344 LATYLEKY 351 (370)
T ss_pred HHHHHHHh
Confidence 99988764
No 108
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.96 E-value=2.9e-27 Score=235.13 Aligned_cols=321 Identities=14% Similarity=0.132 Sum_probs=214.5
Q ss_pred EEEecccChhhccCCCCcHHHHHHHHHHHHhc--CCCCCCC----HHHHHHHHHHHhhCC---CCCeEEEeCCHHHHHHH
Q 011856 100 EYIDYVGSWGPAIIGHADDQVLAALGETMKKG--TSFGAPC----LLENVLAEMVISAVP---SIEMVRFVNSGTEACMG 170 (476)
Q Consensus 100 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~--~~~~~~~----~~~~~la~~l~~~~~---~~e~v~~~~sGseA~~~ 170 (476)
..+|+..|. ++++ .+|.+.+++.+.+... ....|+. ++++.+++++.+..+ .+++|++++|+++++..
T Consensus 27 ~~i~l~~~~--~~~~-~~~~~~~al~~~l~~~~~~~~~Y~~~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~l~~ 103 (368)
T PRK03317 27 VPVRLNTNE--NPYP-PSPALVADIAEAVAEAAAGLNRYPDRDAVALRADLAAYLTAQTGVGLTVENVWAANGSNEILQQ 103 (368)
T ss_pred ceeEecCCC--CCCC-CCHHHHHHHHHHHhhhhhhhccCCCCchHHHHHHHHHHhhhhccCCCChhhEEECCCHHHHHHH
Confidence 368887774 3444 7899999999887541 1223443 344555555544433 57899999999999999
Q ss_pred HHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEE
Q 011856 171 VLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAI 250 (476)
Q Consensus 171 al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~v 250 (476)
+++.. ...++.|++..++|+++... ....|..+...+.....++ |++++++.++++ +++++
T Consensus 104 ~~~~~--~~~gd~v~v~~P~y~~~~~~-~~~~g~~~~~~~~~~~~~~--------------d~~~l~~~~~~~--~~~~i 164 (368)
T PRK03317 104 LLQAF--GGPGRTALGFVPSYSMHPII-ARGTHTEWVEGPRAADFTL--------------DVDAAVAAIAEH--RPDVV 164 (368)
T ss_pred HHHHh--cCCCCEEEEeCCChHHHHHH-HHhcCCeeEEcccCCCCCC--------------CHHHHHHHHhcc--CCCEE
Confidence 99842 24567788889999875433 2333332222111101111 789999998753 34455
Q ss_pred EEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccchhhccCCCCchh---hhhhhcC-CCCcEEEE
Q 011856 251 ILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLT---TLGKIIG-GGLPVGAY 325 (476)
Q Consensus 251 i~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pDi~---t~sK~lg-~G~~iG~~ 325 (476)
+++..+|++|.+.+ .+++++||+.++++||+||+|.+| +.+........+..|+++ ||||++| +|+|+||+
T Consensus 165 ~l~~p~NPtG~~~~----~~~l~~l~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~ 240 (368)
T PRK03317 165 FLTSPNNPTGTALP----LDDVEAILDAAPGIVVVDEAYAEFRRSGTPSALTLLPEYPRLVVSRTMSKAFAFAGGRLGYL 240 (368)
T ss_pred EEeCCCCCCCCCCC----HHHHHHHHHHCCceEEEeCCchhhcccCCcCHHHHHHhCCCEEEEEechhhhccchhhhhhh
Confidence 55556778899998 777888888889999999999988 555444444445556766 8999998 79999999
Q ss_pred EecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeE
Q 011856 326 GGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMF 404 (476)
Q Consensus 326 ~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~ 404 (476)
++++++++.+.... .+++.++++++++.++|+..+. .+..++++++.+.+.+.|++ +++. ...+.|.++
T Consensus 241 ~~~~~~~~~l~~~~-----~~~~~s~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~-~~~~~~~~~ 310 (368)
T PRK03317 241 AAAPAVVDALRLVR-----LPYHLSAVTQAAARAALRHADELLASVAALRAERDRVVAWLRE----LGLR-VAPSDANFV 310 (368)
T ss_pred hCCHHHHHHHHhcC-----CCCCCCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHH----CCCE-eCCCCCcEE
Confidence 99999999887321 3577889999999988864322 22233344444444444443 3332 223445554
Q ss_pred EE-EEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCC-cceEEeCCCcHHHHHHHHHHHHHHHHH
Q 011856 405 GF-FFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-EAGFTSLAHSSDDIQHTITAAEKVKMR 473 (476)
Q Consensus 405 ~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~-~~~~~~~~~t~e~i~~~~~~l~~~~~~ 473 (476)
.+ .+. + ..++.+.|+++||++.+.+. +.+|+++. +++++++++++|+++++.
T Consensus 311 ~~~~~~-------------~---~~~~~~~l~~~Gv~v~~~~~~~~iRi~~~-~~~~~~~~~~~l~~~~~~ 364 (368)
T PRK03317 311 LFGRFA-------------D---RHAVWQGLLDRGVLIRDVGIPGWLRVTIG-TPEENDAFLAALAEVLAT 364 (368)
T ss_pred EEeccC-------------C---HHHHHHHHHHCCEEEEeCCCCCeEEEecC-CHHHHHHHHHHHHHHHHH
Confidence 43 221 1 25688899999999988654 46788765 778999999999998764
No 109
>PRK07682 hypothetical protein; Validated
Probab=99.95 E-value=3.9e-26 Score=227.95 Aligned_cols=333 Identities=14% Similarity=0.070 Sum_probs=217.3
Q ss_pred EEecccChhhccCCCCcHHHHHHHHHHHHhc-CCCC---CCCHHHHHHHHHHHhhCC---CCC-eEEEeCCHHHHHHHHH
Q 011856 101 YIDYVGSWGPAIIGHADDQVLAALGETMKKG-TSFG---APCLLENVLAEMVISAVP---SIE-MVRFVNSGTEACMGVL 172 (476)
Q Consensus 101 ~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~-~~~~---~~~~~~~~la~~l~~~~~---~~e-~v~~~~sGseA~~~al 172 (476)
.|+|..+. ..++ .++.+.+++.+.++.. ..|. +..+++.++++++.+.++ .++ +|++++|+++|+..++
T Consensus 22 ~i~l~~~~--~~~~-~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~ 98 (378)
T PRK07682 22 VISLGVGE--PDFV-TPWNVREASIRSLEQGYTSYTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQALDVAM 98 (378)
T ss_pred eEEeCCCC--CCCC-CCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHH
Confidence 57777664 2344 4667888888877653 2222 234677788888876543 344 7999999999999998
Q ss_pred HHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEE
Q 011856 173 RLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIIL 252 (476)
Q Consensus 173 ~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ 252 (476)
+.. ..+++.|++.+++|+.... .....|..+...+....... .-|+++|++.+.+ +++++++
T Consensus 99 ~~l--~~~gd~vl~~~p~y~~~~~-~~~~~g~~~~~~~~~~~~~~------------~~d~~~l~~~~~~---~~~~v~~ 160 (378)
T PRK07682 99 RAI--INPGDEVLIVEPSFVSYAP-LVTLAGGVPVPVATTLENEF------------KVQPAQIEAAITA---KTKAILL 160 (378)
T ss_pred HHh--CCCCCEEEEeCCCchhhHH-HHHHcCCEEEEeecCCccCC------------CCCHHHHHhhcCc---ccEEEEE
Confidence 842 3456788999999986433 33333433322211100000 0178999988864 4566655
Q ss_pred cccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccch-hhccCCCCc---hhhhhhhcC-CCCcEEEEE
Q 011856 253 EPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGA-QEYFGVTPD---LTTLGKIIG-GGLPVGAYG 326 (476)
Q Consensus 253 ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~-~~~~g~~pD---i~t~sK~lg-~G~~iG~~~ 326 (476)
+..+|++|.+.+ .+.+++|.++|++||+++|+||+|.+| ..+.... ....+..+. +.+|||.++ +|+|+||++
T Consensus 161 ~~p~NPtG~~~s-~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~ 239 (378)
T PRK07682 161 CSPNNPTGAVLN-KSELEEIAVIVEKHDLIVLSDEIYAELTYDEAYTSFASIKGMRERTILISGFSKGFAMTGWRLGFIA 239 (378)
T ss_pred ECCCCCcCcCcC-HHHHHHHHHHHHHcCcEEEEehhhhhcccCCCCCChhhcccccCCEEEEecCcccccChhhhhhhhh
Confidence 444667777665 455999999999999999999999888 5432211 122222222 337999999 899999999
Q ss_pred ecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeE
Q 011856 327 GRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMF 404 (476)
Q Consensus 327 ~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~ 404 (476)
+++++++.+.. .....+++.+++++.++.++|+.... +..+++++++.+++.+.|++. ++....+..|.++
T Consensus 240 ~~~~~i~~l~~---~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~----~~~~~~p~g~~~~ 312 (378)
T PRK07682 240 APVYFSEAMLK---IHQYSMMCAPTMAQFAALEALRAGNDDVIRMRDSYRKRRNFFVTSFNEI----GLTCHVPGGAFYA 312 (378)
T ss_pred cCHHHHHHHHH---HHHhhccCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHC----CCccCCCCeeEEE
Confidence 99999998863 22234456788888888888853211 233455566666666666654 3322223344555
Q ss_pred EEEEecCCCcCchhhcccchHHHHHHHHHHH-HCCeEeccCC------CcceEEeCCCcHHHHHHHHHHHHHHHHHh
Q 011856 405 GFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEKVKMRF 474 (476)
Q Consensus 405 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~------~~~~~~~~~~t~e~i~~~~~~l~~~~~~~ 474 (476)
++.+..... ...++.+.++ ++||.+.|+. .+++|+++..+++++++++++|+++++++
T Consensus 313 ~~~~~~~~~------------~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~l~~~ 377 (378)
T PRK07682 313 FPSISSTGL------------SSEEFAEQLLLEEKVAVVPGSVFGESGEGFIRCSYATSLEQLQEAMKRMKRFVENK 377 (378)
T ss_pred EEeccCCCC------------CHHHHHHHHHHhCCEEEcCchhhCcCCCCeEEEEeCCCHHHHHHHHHHHHHHHhhc
Confidence 555532110 1256777776 6899999862 34688998889999999999999998764
No 110
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.95 E-value=1.6e-25 Score=208.90 Aligned_cols=348 Identities=16% Similarity=0.131 Sum_probs=243.5
Q ss_pred EeecCCEEEEcCC--CEEEecccChhhccCCCCcHHHHHHHHHHHHhcCCCCCC---CHHHHHHHHHHHhhCC---CCCe
Q 011856 86 DSVKGSHMWDIDG--NEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAP---CLLENVLAEMVISAVP---SIEM 157 (476)
Q Consensus 86 ~~~~G~~~~d~dG--~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~~~~---~~~~~~la~~l~~~~~---~~e~ 157 (476)
.++..+.-||..+ ..+|=+. -+..---.+|+|.+|+.+.+++|. |||+ .++..++..+.++.+. .++.
T Consensus 10 r~~t~s~KWd~~~g~~DvlPmW---VADMDf~~pp~i~~Al~~rvdhGv-fGY~~~~~~~~~ai~~w~~~r~~~~i~~e~ 85 (388)
T COG1168 10 RLGTNSLKWDAHPGNEDVLPMW---VADMDFPTPPEIIEALRERVDHGV-FGYPYGSDELYAAIAHWFKQRHQWEIKPEW 85 (388)
T ss_pred hcCCCceeccccCCCCCcceee---eecccCCCCHHHHHHHHHHHhcCC-CCCCCCCHHHHHHHHHHHHHhcCCCCCcce
Confidence 3566777788665 3444333 224444479999999999999974 4443 4578889999998876 5789
Q ss_pred EEEeCCHHHHHHHHHHHHHhccC-CceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHH
Q 011856 158 VRFVNSGTEACMGVLRLARAFTG-RERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSAL 236 (476)
Q Consensus 158 v~~~~sGseA~~~al~~ar~~~~-~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l 236 (476)
++|+++.--++..+++ .+|+ ++.|++..+.|+. ...+....|..+...++....+ .+.+ |+++|
T Consensus 86 i~~~p~VVpgi~~~I~---~~T~~gd~Vvi~tPvY~P-F~~~i~~n~R~~i~~pL~~~~~--------~y~i---D~~~L 150 (388)
T COG1168 86 IVFVPGVVPGISLAIR---ALTKPGDGVVIQTPVYPP-FYNAIKLNGRKVIENPLVEDDG--------RYEI---DFDAL 150 (388)
T ss_pred EEEcCcchHhHHHHHH---HhCcCCCeeEecCCCchH-HHHHHhhcCcEEEeccccccCC--------cEEe---cHHHH
Confidence 9999999999999999 6775 5667777888876 4455556666554433321111 2222 89999
Q ss_pred HHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccc-ccchhhccCCCCc-----h
Q 011856 237 ENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLA-YGGAQEYFGVTPD-----L 309 (476)
Q Consensus 237 e~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g-~~~~~~~~g~~pD-----i 309 (476)
|+.+.+. +++++|++..+|++|.++..++ |.+|.+||.+||++||+||+|..+ ..| .+... ..+.++ +
T Consensus 151 E~~~~~~--~vkl~iLCnPHNP~Grvwt~ee-L~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~--a~ls~~~a~~~i 225 (388)
T COG1168 151 EKAFVDE--RVKLFILCNPHNPTGRVWTKEE-LRKIAELCLRHGVRVISDEIHADLVLGGHKHIPF--ASLSERFADNSI 225 (388)
T ss_pred HHHHhcC--CccEEEEeCCCCCCCccccHHH-HHHHHHHHHHcCCEEEeecccccccccCCCccch--hhcChhhhcceE
Confidence 9999863 5666666666677888776555 999999999999999999999999 655 33332 223332 2
Q ss_pred h--hhhhhcC-CCCcEEEEEe-cHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHH
Q 011856 310 T--TLGKIIG-GGLPVGAYGG-RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQG 383 (476)
Q Consensus 310 ~--t~sK~lg-~G~~iG~~~~-~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~ 383 (476)
+ +-||+|+ +|+.+++++. ++++.+.+.+ ++...+..+.|.+++.|..++++.-+. +++.+.++.+.+++.+.
T Consensus 226 t~~saSKtFNlaGL~~a~~Ii~n~~lr~~~~~--~l~~~~~~~~n~lg~~A~~aAY~~G~~WLd~L~~yl~~N~~~~~~~ 303 (388)
T COG1168 226 TLTSASKTFNLAGLKCAYIIISNRELRAKFLK--RLKRNGLHGPSALGIIATEAAYNQGEPWLDELLEYLKDNRDYVADF 303 (388)
T ss_pred EEeeccccccchhhhheeEEecCHHHHHHHHH--HHHHhcCCCCchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHH
Confidence 2 3579999 8999999855 5666444432 222334457799999999999987665 78888999999999998
Q ss_pred HHHHhhhcCCceEeeeece-eEEEEEecCCCcCchhhcccchHHHHHHHHHHHHC-CeEeccC------CCcceEEeCCC
Q 011856 384 IIDAGKKAGHAICGGYISG-MFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEE-GVYFAPS------QFEAGFTSLAH 455 (476)
Q Consensus 384 L~~~~~~~~~~~~v~~~g~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~------~~~~~~~~~~~ 455 (476)
|++. .|.+......|. ++|+++..-... + .++.+.|+++ +|.+.++ +.+.+|+++++
T Consensus 304 l~~~---~P~v~v~~p~gTYL~WLD~r~l~l~--------d----~~l~~~ll~~akVal~~G~~FG~~g~gf~RlN~ac 368 (388)
T COG1168 304 LNKH---LPGVKVTEPQGTYLAWLDCRELGLD--------D----SELAEFLLEEAKVALSPGSTFGEEGSGFVRLNFAC 368 (388)
T ss_pred HHhh---CCCcEEecCCCceeeeeeccccCCC--------h----HHHHHHHHHhhcEeccCCCccCcCCCceEEEecCC
Confidence 8875 343444445555 466777542211 1 3455555543 5655554 44567999999
Q ss_pred cHHHHHHHHHHHHHHHHHh
Q 011856 456 SSDDIQHTITAAEKVKMRF 474 (476)
Q Consensus 456 t~e~i~~~~~~l~~~~~~~ 474 (476)
+++-+++++++|..+++.+
T Consensus 369 pr~~L~eal~ri~~al~~~ 387 (388)
T COG1168 369 PRAILEEALERLKRALKKR 387 (388)
T ss_pred CHHHHHHHHHHHHHHHhcc
Confidence 9999999999999988753
No 111
>PRK07324 transaminase; Validated
Probab=99.95 E-value=3.9e-26 Score=226.99 Aligned_cols=339 Identities=14% Similarity=0.116 Sum_probs=215.8
Q ss_pred EEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhc-CCCCCCCHHHHHHHHHHHhhCC--CCCeEEEeCCHHHHHHH
Q 011856 94 WDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKG-TSFGAPCLLENVLAEMVISAVP--SIEMVRFVNSGTEACMG 170 (476)
Q Consensus 94 ~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~-~~~~~~~~~~~~la~~l~~~~~--~~e~v~~~~sGseA~~~ 170 (476)
++..|..++++..+ .+.-..++.+ +++.+++.+. ..|+ +.....+|.+.+++++. .+++|++++|+++|+..
T Consensus 21 ~~~~~~~~~~~~~~---e~~~~~~~~~-~~~~~~~~~~~~~Y~-~~~G~~~lr~~ia~~~~~~~~~~vi~t~G~~~al~~ 95 (373)
T PRK07324 21 YDIAESCIDSLTLE---ELLALAGKNP-EAFYQELGQKKLTYG-WIEGSPEFKEAVASLYQNVKPENILQTNGATGANFL 95 (373)
T ss_pred cccccCCCCCCcHH---HHHhccCcch-HHHHHHHhcCCccCC-CCCCCHHHHHHHHHHhcCCChhhEEEcCChHHHHHH
Confidence 44555556666555 3333356677 8888887763 2333 22233456666666543 56899999999999999
Q ss_pred HHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEE
Q 011856 171 VLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAI 250 (476)
Q Consensus 171 al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~v 250 (476)
++... ...++.|++..++|.... ......|..+...+.....+. .-|++++++.++. ++++|
T Consensus 96 ~~~~l--~~~gd~Vl~~~P~y~~~~-~~~~~~g~~v~~v~~~~~~~~------------~~d~~~l~~~~~~---~~kli 157 (373)
T PRK07324 96 VLYAL--VEPGDHVISVYPTYQQLY-DIPESLGAEVDYWQLKEENGW------------LPDLDELRRLVRP---NTKLI 157 (373)
T ss_pred HHHHh--CCCCCEEEEcCCCchhHH-HHHHHcCCEEEEEecccccCC------------CCCHHHHHHhCCC---CCcEE
Confidence 99842 345677888888876643 333344443332221111111 0178888887753 56677
Q ss_pred EEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccc-hhhccCCCCchhhhhhhcC-CCCcEEEEEe
Q 011856 251 ILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGG-AQEYFGVTPDLTTLGKIIG-GGLPVGAYGG 327 (476)
Q Consensus 251 i~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~-~~~~~g~~pDi~t~sK~lg-~G~~iG~~~~ 327 (476)
+++..+|++|.+.+.++ +++|.++|++||+++|+||+|.++ ..+... ..+.++....+.+|||.++ +|+|+||+++
T Consensus 158 ~i~~p~NPtG~~~~~~~-l~~i~~~a~~~~~~ii~De~y~~l~~~~~~~s~~~~~~~~I~~~s~SK~~~~~G~RiG~i~~ 236 (373)
T PRK07324 158 CINNANNPTGALMDRAY-LEEIVEIARSVDAYVLSDEVYRPLDEDGSTPSIADLYEKGISTNSMSKTYSLPGIRVGWIAA 236 (373)
T ss_pred EEeCCCCCCCCCCCHHH-HHHHHHHHHHCCCEEEEEccccccccCCCCCChhhccCCEEEEecchhhcCCccceeEEEec
Confidence 77766777888776544 999999999999999999999888 433211 1111111112348999999 8999999999
Q ss_pred cHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeec-eeEEE
Q 011856 328 RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYIS-GMFGF 406 (476)
Q Consensus 328 ~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g-~~~~i 406 (476)
++++++.+.. .....+++.+.+++.++..+|+.. +.+.++.++..+..++.|.+...+++....+...| .++++
T Consensus 237 ~~~li~~~~~---~~~~~~~~~~~~~q~~a~~~l~~~--~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~p~gg~~~~i 311 (373)
T PRK07324 237 NEEVIDILRK---YRDYTMICAGVFDDMLASLALEHR--DAILERNRKIVRTNLAILDEWVAKEPRVSYVKPKAVSTSFV 311 (373)
T ss_pred CHHHHHHHHH---HhCcEEecCChHHHHHHHHHHcCH--HHHHHHHHHHHHHHHHHHHHHHhcCCCceEECCCceEEEEE
Confidence 9999988873 233445677888888888777521 23333433333333344444333443333344444 44555
Q ss_pred EEecCCCcCchhhcccchHHHHHHHHHHH-HCCeEeccCC----CcceEEeCCCcHHHHHHHHHHHHHHHHHh
Q 011856 407 FFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ----FEAGFTSLAHSSDDIQHTITAAEKVKMRF 474 (476)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~----~~~~~~~~~~t~e~i~~~~~~l~~~~~~~ 474 (476)
.+... ....++++.|+ ++||.+.|+. .+++|+++..+++.+++++++|++++++.
T Consensus 312 ~~~~~-------------~~~~~~~~~ll~~~gv~v~pg~~F~~~~~iRis~~~~~~~l~~~l~rl~~~l~~~ 371 (373)
T PRK07324 312 KLDVD-------------MPSEDFCLKLLKETGVLLVPGNRFDLEGHVRIGYCCDTETLKKGLKKLSEFLREF 371 (373)
T ss_pred EeCCC-------------CCHHHHHHHHHHhcCEEEECccccCCCCeEEEEecCCHHHHHHHHHHHHHHHHhc
Confidence 55321 01256777765 6799999974 24678998889999999999999998764
No 112
>PLN00175 aminotransferase family protein; Provisional
Probab=99.95 E-value=2.5e-25 Score=223.77 Aligned_cols=331 Identities=16% Similarity=0.115 Sum_probs=219.8
Q ss_pred EEEecccChhhccCCCCcHHHHHHHHHHHHhc-CCCC---CCCHHHHHHHHHHHhhCC---CCC-eEEEeCCHHHHHHHH
Q 011856 100 EYIDYVGSWGPAIIGHADDQVLAALGETMKKG-TSFG---APCLLENVLAEMVISAVP---SIE-MVRFVNSGTEACMGV 171 (476)
Q Consensus 100 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~-~~~~---~~~~~~~~la~~l~~~~~---~~e-~v~~~~sGseA~~~a 171 (476)
..|||..|. +--..++.+.+++.+.++++ ..|+ +..+++.++++++.+..+ +.+ +|++|+|+++|+..+
T Consensus 55 ~~i~l~~G~---P~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~~I~vt~G~~~al~~~ 131 (413)
T PLN00175 55 GAINLGQGF---PNFDGPDFVKEAAIQAIRDGKNQYARGFGVPELNSAIAERFKKDTGLVVDPEKEVTVTSGCTEAIAAT 131 (413)
T ss_pred CeEecCCCC---CCCCCCHHHHHHHHHHHhcCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCHHHHHHHH
Confidence 468888773 22224788999998888763 2232 234677778887776543 355 699999999999998
Q ss_pred HHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCC-CCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEE
Q 011856 172 LRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPD-SPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAI 250 (476)
Q Consensus 172 l~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~v 250 (476)
++. ....++.|++.+++|..+. ..+...|..+..++... ... -|+++|++.+.. ++++|
T Consensus 132 ~~~--l~~~gd~Vlv~~P~y~~~~-~~~~~~g~~~~~v~~~~~~~~--------------~~~~~l~~~~~~---~~k~i 191 (413)
T PLN00175 132 ILG--LINPGDEVILFAPFYDSYE-ATLSMAGAKIKTVTLRPPDFA--------------VPEDELKAAFTS---KTRAI 191 (413)
T ss_pred HHH--hCCCCCEEEEeCCCchhHH-HHHHHcCCEEEEEECCcccCC--------------CCHHHHHHhcCc---CceEE
Confidence 884 2355678888888886643 33444454433322210 011 168999988863 46777
Q ss_pred EEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccc-hhhccCCCCch---hhhhhhcC-CCCcEEE
Q 011856 251 ILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGG-AQEYFGVTPDL---TTLGKIIG-GGLPVGA 324 (476)
Q Consensus 251 i~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~-~~~~~g~~pDi---~t~sK~lg-~G~~iG~ 324 (476)
++++.+|++|.+.+ ++.+++|.++|++||+++|+||+|..| ..+... ..+..+....+ -+|||.++ +|+|+||
T Consensus 192 ~i~~p~NPtG~~~s-~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~s~~~~~~~~~~vi~i~SfSK~~~~~G~RiG~ 270 (413)
T PLN00175 192 LINTPHNPTGKMFT-REELELIASLCKENDVLAFTDEVYDKLAFEGDHISMASLPGMYERTVTMNSLGKTFSLTGWKIGW 270 (413)
T ss_pred EecCCCCCCCcCCC-HHHHHHHHHHHHHcCcEEEEecccCccccCCcccChhhCCCCcCcEEEEecchhhccCcchheee
Confidence 77766777888775 555999999999999999999999887 433221 11222222222 37999999 8999999
Q ss_pred EEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeece
Q 011856 325 YGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISG 402 (476)
Q Consensus 325 ~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~ 402 (476)
+++++++++.+.. .....+++.+++.+.++.++|+..+. ++..++++++.+.+.+.|++. ++....+..|.
T Consensus 271 ~v~~~~l~~~l~~---~~~~~~~~~s~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~p~g~~ 343 (413)
T PLN00175 271 AIAPPHLTWGVRQ---AHSFLTFATATPMQWAAVAALRAPESYYEELKRDYSAKKDILVEGLKEV----GFKVYPSSGTY 343 (413)
T ss_pred eEeCHHHHHHHHH---HHhhccCCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC----CCeecCCCeeE
Confidence 9999999888763 22334577888899998888853211 334455556666666666553 33222233455
Q ss_pred eEEEEEecCCCcCchhhcccchHHHHHHHHHHH-HCCeEeccCC---------CcceEEeCCCcHHHHHHHHHHHHHHHH
Q 011856 403 MFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ---------FEAGFTSLAHSSDDIQHTITAAEKVKM 472 (476)
Q Consensus 403 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~---------~~~~~~~~~~t~e~i~~~~~~l~~~~~ 472 (476)
++++.+..... ....++++.|+ ++||.+.|+. .+.+|+++..+++++++++++|.++++
T Consensus 344 f~~~~~~~~~~-----------~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~~~~~e~l~~~~~rL~~~~~ 412 (413)
T PLN00175 344 FVMVDHTPFGF-----------ENDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAFCKDEETLRAAVERMKTKLK 412 (413)
T ss_pred EEEEeccccCC-----------CCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 66666521110 01256778776 5699998862 235788888899999999999998875
No 113
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.95 E-value=2.9e-26 Score=226.87 Aligned_cols=322 Identities=12% Similarity=0.117 Sum_probs=219.2
Q ss_pred CCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHH
Q 011856 97 DGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLA 175 (476)
Q Consensus 97 dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~~~~~~~~~~la~~l~~~~~-~~e~v~~~~sGseA~~~al~~a 175 (476)
+++.++|+..|. +++| .+|.+.+++.+.+.... .|+.....+|.+.++++++ .+++|++++|+++++..+++..
T Consensus 27 ~~~~~i~l~~ne--n~~~-~~~~v~~a~~~~~~~~~--~Yp~~g~~~Lr~aia~~~~~~~~~I~vt~Gs~e~i~~~~~~l 101 (366)
T PRK01533 27 GDHSFVKLASNE--NPFG-CSPRVLDELQKSWLDHA--LYPDGGATTLRQTIANKLHVKMEQVLCGSGLDEVIQIISRAV 101 (366)
T ss_pred CCCceEEeCCCC--CCCC-CCHHHHHHHHHHHHhcC--cCCCCCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHHh
Confidence 356788988875 5666 68889999988766532 3455555677777777775 6889999999999999999842
Q ss_pred HhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEccc
Q 011856 176 RAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPV 255 (476)
Q Consensus 176 r~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~ 255 (476)
..+++.|++.+++|.++.. .....|..+...+.. ..+ -|+++|++.+++ ++++++++..
T Consensus 102 --~~~gd~vlv~~P~y~~~~~-~~~~~g~~v~~v~~~-~~~--------------~d~~~l~~~~~~---~~~~v~i~~P 160 (366)
T PRK01533 102 --LKAGDNIVTAGATFPQYRH-HAIIEGCEVKEVALN-NGV--------------YDLDEISSVVDN---DTKIVWICNP 160 (366)
T ss_pred --cCCCCEEEEcCCcHHHHHH-HHHHcCCEEEEeecC-CCC--------------cCHHHHHHHhCc---CCcEEEEeCC
Confidence 2345678888888877543 334444433322211 001 178999988864 3455555555
Q ss_pred CCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccccc-chhhccCCCCchh---hhhhhcC-CCCcEEEEEecH
Q 011856 256 VGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG-GAQEYFGVTPDLT---TLGKIIG-GGLPVGAYGGRR 329 (476)
Q Consensus 256 ~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~-~~~~~~g~~pDi~---t~sK~lg-~G~~iG~~~~~~ 329 (476)
+|++|.+.+.++ +++|.++|++++ ++|+||+|.+| ..+.. .......-.+.++ +|||.+| +|+|+||+++++
T Consensus 161 ~NPTG~~~~~~~-l~~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~~~ 238 (366)
T PRK01533 161 NNPTGTYVNDRK-LTQFIEGISENT-LIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVGHE 238 (366)
T ss_pred CCCCCCCcCHHH-HHHHHHhCCCCC-EEEEEccHHHhhccccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhCCH
Confidence 677888887555 888999998876 57779999877 43211 1111122223333 7999999 899999999999
Q ss_pred HHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEe
Q 011856 330 DIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFT 409 (476)
Q Consensus 330 ~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~ 409 (476)
++++.+... ..+++.|.+++.++.++|+ +.++.+++++.....++.+.+.....++. ..++.|.|+++.+.
T Consensus 239 ~~~~~l~~~-----~~~~~~~~~~q~aa~~~l~---~~~~~~~~~~~~~~~r~~~~~~l~~~g~~-~~~~~~nf~~~~~~ 309 (366)
T PRK01533 239 ELIEKLNVV-----RLPFNVSSLAQKAATIAFG---DDEFIEEIVRVNTEGLRQYESFCKENEIP-FYQSQTNFIFLPVE 309 (366)
T ss_pred HHHHHHHHh-----cCCCCcCHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHHHhCCCc-cCCCcCcEEEEeCC
Confidence 999988632 1357889999999988884 34455455444444444454444444432 23457888888762
Q ss_pred cCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCCcceEEeCCCcHHHHHHHHHHHHHHHHH
Q 011856 410 EGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHTITAAEKVKMR 473 (476)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~~~~~t~e~i~~~~~~l~~~~~~ 473 (476)
+ ..++.+.|+++||.+++. .+.+|+++ .+.+++++++++|+++++.
T Consensus 310 ~----------------~~~~~~~l~~~GI~Vr~~-~~~iRis~-~~~~~~~~l~~al~~~~~~ 355 (366)
T PRK01533 310 N----------------GGEIYEACAHAGFIIRPF-PNGVRITV-GTREQNEGVISVLQQHFEN 355 (366)
T ss_pred C----------------HHHHHHHHHHCCcEEccC-CCceEEeC-CCHHHHHHHHHHHHHHHHh
Confidence 1 146788999999999985 35678874 4789999999999988753
No 114
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.95 E-value=3.7e-25 Score=222.29 Aligned_cols=339 Identities=10% Similarity=0.109 Sum_probs=217.5
Q ss_pred CEEEecccChhhccCCCCcHHHHHHHHHHHHhcCC--CC---CCCHHHHHHHHHHHhhCC---CC-CeEEEeCCHHHHHH
Q 011856 99 NEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTS--FG---APCLLENVLAEMVISAVP---SI-EMVRFVNSGTEACM 169 (476)
Q Consensus 99 ~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~--~~---~~~~~~~~la~~l~~~~~---~~-e~v~~~~sGseA~~ 169 (476)
+..+||..+.. +.+ ..+|.+.+++.+.+.+... |. +..+++.++++++.+.++ .+ ++|++++|+++++.
T Consensus 39 ~~~i~l~~g~~-~~~-~p~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~al~ 116 (405)
T PRK06207 39 GRPVDFSHGDV-DAH-EPTPGAFELFSAGVERGGVQAYTEYRGDADIRELLAARLAAFTGAPVDAADELIITPGTQGALF 116 (405)
T ss_pred CCceecCCcCC-CCC-CCCHHHHHHHHHHHhcCCCccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHH
Confidence 45567775521 222 2568889988888765322 22 234678888888888754 45 89999999999999
Q ss_pred HHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEE
Q 011856 170 GVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAA 249 (476)
Q Consensus 170 ~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~ 249 (476)
.+++.. ...++.|++.+++|.+.. ..+...|..+..++...... . +-. .-|+++|++.+++ .+++
T Consensus 117 ~~~~~l--~~~Gd~Vlv~~P~y~~~~-~~~~~~g~~v~~v~~~~~~~--~----~~~---~~d~~~l~~~~~~---~~k~ 181 (405)
T PRK06207 117 LAVAAT--VARGDKVAIVQPDYFANR-KLVEFFEGEMVPVQLDYLSA--D----KRA---GLDLDQLEEAFKA---GVRV 181 (405)
T ss_pred HHHHHh--cCCCCEEEEeCCCchhHH-HHHHHcCCEEEEEeccccCc--c----cCC---CcCHHHHHHhhhh---cCeE
Confidence 999842 345678999999998754 33344454433222110000 0 000 0178999998864 3555
Q ss_pred EEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccc-hhhccCCCCc-h---hhhhhhcC-CCCcE
Q 011856 250 IILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGG-AQEYFGVTPD-L---TTLGKIIG-GGLPV 322 (476)
Q Consensus 250 vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~-~~~~~g~~pD-i---~t~sK~lg-~G~~i 322 (476)
|+++..+|++|.+.+.++ +++|.++|++||++||+||+|..| ..+... ....+...+| + .+|||.++ +|+|+
T Consensus 182 v~l~~P~NPTG~~~s~e~-l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlRi 260 (405)
T PRK06207 182 FLFSNPNNPAGVVYSAEE-IAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGYRL 260 (405)
T ss_pred EEECCCCCCCCcCCCHHH-HHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhhccCcccce
Confidence 555444677888877555 999999999999999999999887 444221 1111122222 2 37999999 89999
Q ss_pred EEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHhhhc-CCceEeee
Q 011856 323 GAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKA-GHAICGGY 399 (476)
Q Consensus 323 G~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~v~~ 399 (476)
||+++++++++.+... ......+.+.+++.++.++|+.-.. ++..++.+++.+.+.+.|+ ++ ++....+.
T Consensus 261 G~ii~~~~l~~~~~~~---~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~----~~~~~~~~~p~ 333 (405)
T PRK06207 261 GVAFGSPAIIDRMEKL---QAIVSLRAAGYSQAVLRTWFSEPDGWMKDRIARHQAIRDDLLRVLR----GVEGVFVRAPQ 333 (405)
T ss_pred EEEEcCHHHHHHHHHH---HhHhccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHh----cCCCceecCCC
Confidence 9999999998888632 1222345566778877777752100 1223333333444444443 33 22222244
Q ss_pred eceeEEEEEecCCCcCchhhcccchHHHHHHHHHHH-HCCeEeccCC------CcceEEeCCCcHHHHHHHHHHHHHHHH
Q 011856 400 ISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEKVKM 472 (476)
Q Consensus 400 ~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~------~~~~~~~~~~t~e~i~~~~~~l~~~~~ 472 (476)
.|.++|+.+..... ...++.+.|+ ++||.+.|+. .+.+|+++..+++++++++++|.++++
T Consensus 334 gg~fl~~~l~~~~~------------~~~~~~~~l~~~~gV~v~pG~~F~~~~~~~~Ris~~~~~~~l~~al~rl~~~l~ 401 (405)
T PRK06207 334 AGSYLFPRLPRLAV------------SLHDFVKILRLQAGVIVTPGTEFSPHTADSIRLNFSQDHAAAVAAAERIAQLIE 401 (405)
T ss_pred eeEEEEEeCcccCC------------CHHHHHHHHHHhcCEEEeCchHhCCCCCCeEEEEecCCHHHHHHHHHHHHHHHH
Confidence 57788888742110 1256788887 6899999864 246789888899999999999999987
Q ss_pred Hh
Q 011856 473 RF 474 (476)
Q Consensus 473 ~~ 474 (476)
+.
T Consensus 402 ~~ 403 (405)
T PRK06207 402 RY 403 (405)
T ss_pred Hh
Confidence 64
No 115
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.95 E-value=1e-25 Score=226.36 Aligned_cols=330 Identities=12% Similarity=0.098 Sum_probs=214.9
Q ss_pred CCEEEecccChhhccCCCCcHHHHHHHHHHHHhcCCCCC----CCHHHHHHHHHHHhhCC---CC-CeEEEeCCHHHHHH
Q 011856 98 GNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGA----PCLLENVLAEMVISAVP---SI-EMVRFVNSGTEACM 169 (476)
Q Consensus 98 G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~~~----~~~~~~~la~~l~~~~~---~~-e~v~~~~sGseA~~ 169 (476)
|..++||..|. ..++ .++.+.+++.+.+.+...+++ ..++++.+++++.+..+ .+ ++|++|+|+++++.
T Consensus 31 ~~~~i~l~~g~--p~~~-~~~~~~~~~~~~~~~~~~~~y~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~ 107 (399)
T PRK07681 31 GHKMIDLSIGN--PDMP-PADFVREEMVHTANQKESYGYTLSGIQEFHEAVTEYYNNTHNVILNADKEVLLLMGSQDGLV 107 (399)
T ss_pred CCCeEEeCCCC--CCCC-CCHHHHHHHHHHHhccccCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCeEEECCCcHHHHH
Confidence 45678888773 2233 578899998887765333433 24566777777765432 55 78999999999999
Q ss_pred HHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEE
Q 011856 170 GVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAA 249 (476)
Q Consensus 170 ~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~ 249 (476)
.+++.. ...++.|++.+++|.++... +...|..+..++.....++ .-|++++++.+.. ++++
T Consensus 108 ~~~~~~--~~~Gd~Vlv~~P~y~~~~~~-~~~~G~~~~~v~~~~~~~~------------~~d~~~l~~~~~~---~~k~ 169 (399)
T PRK07681 108 HLPMVY--ANPGDIILVPDPGYTAYETG-IQMAGATSYYMPLKKENDF------------LPDLELIPEEIAD---KAKM 169 (399)
T ss_pred HHHHHh--CCCCCEEEECCCCccchHHH-HHhcCCEEEEEecCCCCCC------------cCCHHHHHHhccc---cceE
Confidence 988742 34567788889998775443 3344544333222111111 0178888887753 4666
Q ss_pred EEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccc-h-hhccCC---CCchhhhhhhcC-CCCcE
Q 011856 250 IILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGG-A-QEYFGV---TPDLTTLGKIIG-GGLPV 322 (476)
Q Consensus 250 vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~-~-~~~~g~---~pDi~t~sK~lg-~G~~i 322 (476)
|+++..+|++|.+.+.++ +++|.++|++||++||+||+|.+| ..+... . .+..+. ...+-+|||.++ +|+|+
T Consensus 170 v~l~~P~NPTG~~~s~~~-~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRi 248 (399)
T PRK07681 170 MILNFPGNPVPAMAHEDF-FKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKSYSLAGSRI 248 (399)
T ss_pred EEEeCCCCCcCcCCCHHH-HHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCCcccEEEEeecccccCCcccee
Confidence 666644667888876555 999999999999999999999888 433211 1 111111 112337999998 89999
Q ss_pred EEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeee
Q 011856 323 GAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYI 400 (476)
Q Consensus 323 G~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~ 400 (476)
||+++++++++.+.. ......++.+.+.+.++.++|+.... ++..+.++++.+.+.+.|++ +++....+..
T Consensus 249 G~~i~~~~l~~~~~~---~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~p~~ 321 (399)
T PRK07681 249 GYMIGNEEIVRALTQ---FKSNTDYGVFLPIQKAACAALRNGAAFCEKNRGIYQERRDTLVDGFRT----FGWNVDKPAG 321 (399)
T ss_pred EEEecCHHHHHHHHH---HHhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH----CCCcccCCCe
Confidence 999999999988863 22223556778888888887753211 22233344444445444443 3432222445
Q ss_pred ceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHH-CCeEeccCC------CcceEEeCCCcHHHHHHHHHHHHH
Q 011856 401 SGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLE-EGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEK 469 (476)
Q Consensus 401 g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~~------~~~~~~~~~~t~e~i~~~~~~l~~ 469 (476)
|.++++.+... ....++...+++ +||.+.|+. .+.+|+++..+++++++++++|++
T Consensus 322 g~f~~~~l~~~-------------~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~~~~l~~l~~ 384 (399)
T PRK07681 322 SMFVWAEIPKG-------------WTSLSFAYALMDRANVVVTPGHAFGPHGEGFVRIALVQDEEVLQQAVENIRN 384 (399)
T ss_pred eeEEEEECCCC-------------CCHHHHHHHHHHhCCEEEeCChhhCcCCCCeEEEEecCCHHHHHHHHHHHHH
Confidence 77888877421 112567788877 899998863 236788888889999999999987
No 116
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.95 E-value=1.3e-25 Score=227.91 Aligned_cols=324 Identities=13% Similarity=0.099 Sum_probs=208.3
Q ss_pred EEEecccChhhccCCCCcHHHHHHHHHHHHhcCCCCC---CCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHH
Q 011856 100 EYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGA---PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLAR 176 (476)
Q Consensus 100 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~~~---~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar 176 (476)
..+||..+ ++..-..|.+.+++.+.......|+. ..+++..+++++....+..++|++++|+++|+..+++..
T Consensus 86 ~~i~L~~g---~p~~~~~p~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~Iiit~G~~~al~~~~~~l- 161 (431)
T PRK15481 86 PLHDLAGG---NPDPQRLPDLSRYFARLSRTPRLYGDAPVSPELHAWAARWLRDDCPVAFEIDLTSGAIDAIERLLCAH- 161 (431)
T ss_pred hhhhhhcC---CCChhHhHHHHHHHHHhhhhhhhcCCcCCCHHHHHHHHHHHhhccCCcCeEEEecCcHHHHHHHHHHh-
Confidence 35666655 33322346677777765544333332 234555555555443333569999999999999999842
Q ss_pred hccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcc-c
Q 011856 177 AFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEP-V 255 (476)
Q Consensus 177 ~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep-~ 255 (476)
...++.|++.+++|.+. ...+...|..+...+.. ..++ |+++|++.++. +++++++.| .
T Consensus 162 -~~pgd~Vlv~~P~y~~~-~~~~~~~g~~~~~v~~~-~~g~--------------~~~~l~~~~~~---~~k~i~~~p~p 221 (431)
T PRK15481 162 -LLPGDSVAVEDPCFLSS-INMLRYAGFSASPVSVD-AEGM--------------QPEKLERALAQ---GARAVILTPRA 221 (431)
T ss_pred -CCCCCEEEEeCCCcHHH-HHHHHHcCCeEEeeccC-CCCC--------------CHHHHHHHHhc---CCCEEEECCCC
Confidence 24567788889888775 34444445544332221 1121 78999998864 456666664 4
Q ss_pred CCCCCcccCCHHHHHHHHHHHHHh-CCEEEEeccccCc-cccccchhhccCCCCchh---hhhhhcCCCCcEEEEEecHH
Q 011856 256 VGNSGFIAPKPDFLNAIRRITKEN-GALLIFDEVMTGF-RLAYGGAQEYFGVTPDLT---TLGKIIGGGLPVGAYGGRRD 330 (476)
Q Consensus 256 ~~~~G~i~~~~~~l~~l~~l~~~~-g~llI~DEv~~g~-r~g~~~~~~~~g~~pDi~---t~sK~lg~G~~iG~~~~~~~ 330 (476)
+|++|.+.+.++ +++|.++|++| +++||+||+|..| ..+...... ...+.++ +|||.+++|+|+||++++++
T Consensus 222 ~NPTG~~~s~~~-~~~l~~la~~~~~~~ii~De~Y~~~~~~~~~~~~~--~~~~~vi~~~SfSK~~~~GlRiG~~i~~~~ 298 (431)
T PRK15481 222 HNPTGCSLSARR-AAALRNLLARYPQVLVIIDDHFALLSSSPYHSVIP--QTTQRWALIRSVSKALGPDLRLAFVASDSA 298 (431)
T ss_pred CCCCCccCCHHH-HHHHHHHHHhcCCceEEecCchhhhccCCCCCCCc--CCCCCEEEEeeeccccCCCceeEEEeCCHH
Confidence 455777776444 99999999999 9999999999877 432111111 1123333 79999999999999999999
Q ss_pred HHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC----CCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEE
Q 011856 331 IMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE----PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGF 406 (476)
Q Consensus 331 i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~----~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i 406 (476)
+++.+.. .....+++.+.+++.++.++|+.-.- .+..+.++++.+.+.+.|++ +++....+..|.++|+
T Consensus 299 ~~~~~~~---~~~~~~~~~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~----~~~~~~~p~gg~f~~~ 371 (431)
T PRK15481 299 TSARLRL---RLNSGTQWVSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQ----YGIAIPSPGDGLNLWL 371 (431)
T ss_pred HHHHHHH---HHhccccCCCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHH----cCCccccCCCeEEEEE
Confidence 9888752 11223345788899998888862110 12233344444444444443 3433334567888888
Q ss_pred EEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCC-------cceEEeCC-CcHHHHHHHHHHHHHHHH
Q 011856 407 FFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-------EAGFTSLA-HSSDDIQHTITAAEKVKM 472 (476)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~-------~~~~~~~~-~t~e~i~~~~~~l~~~~~ 472 (476)
.+..+ ..++.+.|.++||.+.|+.. +.+|+++. .+++++++++++|.+++.
T Consensus 372 ~l~~~---------------~~~~~~~l~~~gV~v~pg~~f~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~~~ 430 (431)
T PRK15481 372 PLDTD---------------SQATALTLAKSGWLVREGEAFGVSAPSHGLRITLSTLNDAEINRLAADLHQALN 430 (431)
T ss_pred ECCCC---------------HHHHHHHHHHCCcEEecCCccccCCCCCeEEEEcCCCChHHHHHHHHHHHHHhc
Confidence 77421 25677888899999998631 24788766 478999999999999875
No 117
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.95 E-value=1.4e-25 Score=218.34 Aligned_cols=316 Identities=17% Similarity=0.155 Sum_probs=218.7
Q ss_pred EEEecccChhhccCCCCcHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCC--CCCeEEEeCCHHHHHHHHHHHHHh
Q 011856 100 EYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP--SIEMVRFVNSGTEACMGVLRLARA 177 (476)
Q Consensus 100 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~~~~~~~~~~la~~l~~~~~--~~e~v~~~~sGseA~~~al~~ar~ 177 (476)
.++|+.+|. |++| .+|++.+++.+.++.. ..||+....+|.+.+++++. ..++|+.+||.+|.+...+++.
T Consensus 23 ~~i~LssNe--nP~g-p~~~~~~~~~~~~~~~--~rYPd~~~~~l~~a~a~~~~~~~~~~V~~gnGsde~i~~l~~~~-- 95 (356)
T COG0079 23 GIIKLSSNE--NPYG-PPPKVIEAIRAALDKL--NRYPDPDYRELRAALAEYYGVVDPENVLVGNGSDELIELLVRAF-- 95 (356)
T ss_pred cceeecCCC--CCCC-CCHHHHHHHHHHHHhh--ccCCCCcHHHHHHHHHHHhCCCCcceEEEcCChHHHHHHHHHHh--
Confidence 688999887 7888 5699999998888753 34566677888888888875 3579999999999999999952
Q ss_pred ccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccC----CCHHHHHHHHhcCCCCeEEEEEc
Q 011856 178 FTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPF----NDVSALENLFENNKGEIAAIILE 253 (476)
Q Consensus 178 ~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----~d~~~le~~l~~~~~~~a~vi~e 253 (476)
..+++.|++..++|.-+...+ ...|..+ +.++. .|++.+.+.+.+ ++.+|++.
T Consensus 96 ~~~gd~vl~~~Ptf~~Y~~~a-~~~g~~~-------------------~~v~~~~~~~d~~~~~~~~~~---~~~lv~i~ 152 (356)
T COG0079 96 VEPGDTVLIPEPTFSMYEIAA-QLAGAEV-------------------VKVPLKEFRLDLDAILAAIRD---KTKLVFLC 152 (356)
T ss_pred hcCCCEEEEcCCChHHHHHHH-HhcCCeE-------------------EEecccccccCHHHHHHhhhc---CCCEEEEe
Confidence 234578999899886644333 2333322 22222 267888777764 35555554
Q ss_pred ccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccchhhccCCCCchh---hhhhhcC-CCCcEEEEEec
Q 011856 254 PVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLT---TLGKIIG-GGLPVGAYGGR 328 (476)
Q Consensus 254 p~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pDi~---t~sK~lg-~G~~iG~~~~~ 328 (476)
..+|++|...+.++ ++++.+.|.+ +.+||+||+|..| . . .......-.++++ ||||++| +|+|+||++++
T Consensus 153 nPNNPTG~~~~~~~-l~~l~~~~~~-~~~vVvDEAY~eF~~-~--~~~~l~~~~~nlivlRTfSKa~gLAGlRlGy~ia~ 227 (356)
T COG0079 153 NPNNPTGTLLPREE-LRALLEALPE-GGLVVIDEAYIEFSP-E--SSLELLKYPPNLIVLRTFSKAFGLAGLRVGYAIAN 227 (356)
T ss_pred CCCCCCCCCCCHHH-HHHHHHhCCC-CcEEEEeCchhhcCC-c--hhhhhccCCCCEEEEEecHHhhhcchhceeeccCC
Confidence 44455677776555 7777777777 9999999999988 5 1 1122222223354 8999999 89999999999
Q ss_pred HHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEE
Q 011856 329 RDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFF 408 (476)
Q Consensus 329 ~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~ 408 (476)
+++++.+.+ ....|+.|.++++++.++|+.- ++.++..+....-+++|.+.....++....++.++|+.+.+
T Consensus 228 ~~~i~~l~~-----vr~p~~v~~~a~~aa~aal~~~---~~~~~~~~~~~~~r~rl~~~l~~~~~~~v~pS~aNFvlv~~ 299 (356)
T COG0079 228 PELIAALNK-----VRPPFNVSSPALAAAIAALRDA---DYLEESVERIREERERLYAALKALGLFGVFPSQANFVLVRV 299 (356)
T ss_pred HHHHHHHHH-----hcCCCCCCHHHHHHHHHHcccH---HHHHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcEEEEEC
Confidence 999999974 3357888999999999988633 33334444444444444444444442223455677877776
Q ss_pred ecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCC-----cceEEeCCCcHHHHHHHHHHHHHHHHH
Q 011856 409 TEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-----EAGFTSLAHSSDDIQHTITAAEKVKMR 473 (476)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~-----~~~~~~~~~t~e~i~~~~~~l~~~~~~ 473 (476)
.+ .. ...+.+.|+++||+++.... .++|++. .|+++.++++++|++++..
T Consensus 300 ~~-------------~~-~~~l~~~L~~~giivR~~~~~~~~~~~lRitv-gt~een~~ll~AL~~~~~~ 354 (356)
T COG0079 300 PD-------------AE-AAALAEALLKKGILVRDCSSVGLLPGYLRITV-GTPEENDRLLAALREVLKG 354 (356)
T ss_pred CC-------------cc-HHHHHHHHHHCCEEEEeCCCCCCCCCeEEEEe-CCHHHHHHHHHHHHHHHhc
Confidence 32 22 35788999999999998743 2456654 4777779999999998764
No 118
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.95 E-value=7.6e-26 Score=224.33 Aligned_cols=318 Identities=13% Similarity=0.099 Sum_probs=209.7
Q ss_pred EEEecccChhhccCCCCcHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHHHhc
Q 011856 100 EYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAF 178 (476)
Q Consensus 100 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~~~~~~~~~~la~~l~~~~~-~~e~v~~~~sGseA~~~al~~ar~~ 178 (476)
+++||.+|. +++| .+|.+.+++.+.++.. ..++.....++.+.+++++. +++++++++|+++++..+++.. .
T Consensus 30 ~~i~l~~n~--~~~~-~~~~v~~a~~~~~~~~--~~~p~~g~~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~~--~ 102 (359)
T PRK03158 30 KIVKLASNE--NPYG-PSPKVKEAIAAHLDEL--ALYPDGYAPELRTKVAKHLGVDEEQLLFGAGLDEVIQMISRAL--L 102 (359)
T ss_pred ceEEecCCC--CCCC-CCHHHHHHHHHHHHHh--hcCCCCcHHHHHHHHHHHhCCCHHHEEECCCHHHHHHHHHHHH--h
Confidence 678988875 4566 5889999999887653 22344455667777777775 5789999999999998888742 2
Q ss_pred cCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCC
Q 011856 179 TGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGN 258 (476)
Q Consensus 179 ~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~ 258 (476)
..++.|++.+++|++.... ....|..+...+.. .+ ..|++++++.++. ++++++++.++|+
T Consensus 103 ~~gd~v~~~~p~y~~~~~~-~~~~g~~~~~~~~~--~~-------------~~d~~~l~~~~~~---~~~~v~i~~p~NP 163 (359)
T PRK03158 103 NPGTNTVMAEPTFSQYRHN-AIIEGAEVREVPLK--DG-------------GHDLEAMLKAIDE---QTKIVWICNPNNP 163 (359)
T ss_pred CCCCEEEEcCCCHHHHHHH-HHHcCCeEEEEecC--CC-------------CcCHHHHHHhcCC---CCCEEEEeCCCCC
Confidence 4567888889999874333 33334333222111 00 0178888887753 4566666656778
Q ss_pred CCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccc-cchhhccCCCCc-h--hhhhhhcC-CCCcEEEEEecHHHH
Q 011856 259 SGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAY-GGAQEYFGVTPD-L--TTLGKIIG-GGLPVGAYGGRRDIM 332 (476)
Q Consensus 259 ~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~-~~~~~~~g~~pD-i--~t~sK~lg-~G~~iG~~~~~~~i~ 332 (476)
+|.+.+.++ +.++.+.|+ +|+++|+||+|..| ..+. .......+..+. + .+|||.+| +|+|+||++++++++
T Consensus 164 tG~~~~~~~-l~~~~~~~~-~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~~~~ 241 (359)
T PRK03158 164 TGTYVNHEE-LLSFLESVP-SHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAALRVGYGIASEELI 241 (359)
T ss_pred CCCCCCHHH-HHHHHHhCC-CCcEEEEECchHhhcCCcccccHHHHHHhcCCEEEEEechHhhcCcchhhehhcCCHHHH
Confidence 899888443 444444442 69999999999877 4321 111111111222 2 38999999 899999999999999
Q ss_pred HhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCC
Q 011856 333 EMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGP 412 (476)
Q Consensus 333 ~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~ 412 (476)
+.+... ..+++.|++++.++.++|+ +.++.+++++..+..++.+.+...++++ ...++.|.++++.+..+
T Consensus 242 ~~~~~~-----~~~~~~~~~~q~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~g~~i~~~~~~~- 311 (359)
T PRK03158 242 EKLNIA-----RPPFNTTRIAQYAAIAALE---DQAFLKECVEKNAEGLEQYYAFCKEYGL-FYYPSQTNFIFVDTGRD- 311 (359)
T ss_pred HHHHHh-----cCCCCCCHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHHHHCCC-eeCCCcCcEEEEECCCC-
Confidence 888642 1246789999999988885 2334444444434444444444334442 22456688888766211
Q ss_pred CcCchhhcccchHHHHHHHHHHHHCCeEeccCC----CcceEEeCCCcHHHHHHHHHHHHHH
Q 011856 413 VYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ----FEAGFTSLAHSSDDIQHTITAAEKV 470 (476)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~----~~~~~~~~~~t~e~i~~~~~~l~~~ 470 (476)
..++.+.|+++||.+.++. .+.+|+++. +.+++++++++|+++
T Consensus 312 --------------~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~~~-~~~~~~~l~~al~~~ 358 (359)
T PRK03158 312 --------------ANELFEALLKKGYIVRSGAALGFPTGVRITIG-LKEQNDKIIELLKEL 358 (359)
T ss_pred --------------HHHHHHHHHHCCeEEeeCCCCCCCCeEEEecC-CHHHHHHHHHHHHHh
Confidence 2578888999999999863 345788766 889999999999875
No 119
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.95 E-value=1.5e-25 Score=222.51 Aligned_cols=324 Identities=14% Similarity=0.105 Sum_probs=212.6
Q ss_pred EEEecccChhhccCCCCcHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHHHhc
Q 011856 100 EYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAF 178 (476)
Q Consensus 100 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~~~~~~~~~~la~~l~~~~~-~~e~v~~~~sGseA~~~al~~ar~~ 178 (476)
.++++..|. +.+| .+|++.+++.+.+.....| +.....+|.+.++++++ .+++|++++|+++++..++++. .
T Consensus 33 ~~~~l~~~~--~~~~-~~~~~~~a~~~~~~~~~~Y--~~~~~~~Lr~~ia~~~~~~~~~I~it~G~~~~l~~~~~~~--~ 105 (369)
T PRK08153 33 FRARIGANE--SGFG-PSPSVIAAMREAAAEIWKY--GDPENHDLRHALAAHHGVAPENIMVGEGIDGLLGLIVRLY--V 105 (369)
T ss_pred ceeEecCCC--CCCC-CCHHHHHHHHHHHHHhhcC--CCCccHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHh--c
Confidence 456877763 3444 6889999998876543333 32235677788887775 5789999999999999988842 3
Q ss_pred cCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCC
Q 011856 179 TGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGN 258 (476)
Q Consensus 179 ~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~ 258 (476)
..++.|++.+++|.+....+ ...|..+... |.... ..|++++++.+... +++++++...+|+
T Consensus 106 ~~gd~vlv~~p~y~~~~~~~-~~~g~~~~~v--p~~~~-------------~~~~~~l~~~~~~~--~~~~i~l~~P~NP 167 (369)
T PRK08153 106 EPGDPVVTSLGAYPTFNYHV-AGFGGRLVTV--PYRDD-------------REDLDALLDAARRE--NAPLVYLANPDNP 167 (369)
T ss_pred CCCCEEEECCCcchHHHHHH-HHcCCeEEEe--eCCCC-------------CCCHHHHHHHhccc--CCcEEEEeCCCCC
Confidence 45667777788887654322 2233322221 11000 11677776655432 4555555333555
Q ss_pred CCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccchhhccCCCCchh---hhhhhcC-CCCcEEEEEecHHHHH
Q 011856 259 SGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLT---TLGKIIG-GGLPVGAYGGRRDIME 333 (476)
Q Consensus 259 ~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pDi~---t~sK~lg-~G~~iG~~~~~~~i~~ 333 (476)
+|.+.+.++ +++|.++|+ +|++||+||+|..| ..+...... ...++++ ||||.+| +|+|+||+++++++++
T Consensus 168 tG~~~~~~~-l~~l~~~~~-~~~~lI~DE~y~~~~~~~~~~~~~--~~~~~~i~~~SfSK~~g~~GlRiG~~v~~~~~~~ 243 (369)
T PRK08153 168 MGSWHPAAD-IVAFIEALP-ETTLLVLDEAYCETAPAGAAPPID--TDDPNVIRMRTFSKAYGLAGARVGYAIGAPGTIK 243 (369)
T ss_pred CCCCCCHHH-HHHHHHhCC-CCcEEEEeCchhhhcCcccchhhh--hcCCCEEEEecchHhccCcchheeeeecCHHHHH
Confidence 688877555 777777776 49999999999887 433221111 1234433 8999999 8999999999999998
Q ss_pred hhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCC
Q 011856 334 MVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPV 413 (476)
Q Consensus 334 ~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~ 413 (476)
.+... ..+++.|++++.++.++|+ ++++.+++++..+..++.+.+...+.++. ..+..|.++++.+..
T Consensus 244 ~l~~~-----~~~~~~s~~~q~~~~~~l~---~~~~~~~~~~~~~~~r~~~~~~L~~~g~~-~~p~~~~f~~~~~~~--- 311 (369)
T PRK08153 244 AFDKV-----RNHFGMNRIAQAAALAALK---DQAYLAEVVGKIAAARDRIAAIARANGLT-PLPSATNFVAIDCGR--- 311 (369)
T ss_pred HHHHh-----hcCCCCCHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHHHHCCCc-cCCCcCcEEEEECCC---
Confidence 87632 1346789999999988885 34455556655555666555554444432 234567777766531
Q ss_pred cCchhhcccchHHHHHHHHHHHHCCeEec-cCC---CcceEEeCCCcHHHHHHHHHHHHHHHHHh
Q 011856 414 YNFEDAKKSETTKFARFYRGMLEEGVYFA-PSQ---FEAGFTSLAHSSDDIQHTITAAEKVKMRF 474 (476)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~-~~~---~~~~~~~~~~t~e~i~~~~~~l~~~~~~~ 474 (476)
+.....++.+.|+++||.++ |+. ...+|+++. ++++++.++++|++++..+
T Consensus 312 ---------~~~~a~~l~~~l~~~Gi~v~~p~~~~~~~~iRis~~-~~~~~~~~~~al~~~~~~~ 366 (369)
T PRK08153 312 ---------DGAFARAVLDGLIARDIFVRMPGVAPLDRCIRVSCG-PDEELDLFAEALPEALEAA 366 (369)
T ss_pred ---------CcccHHHHHHHHHHCCeEEeeCCCCCCCCeEEEecC-CHHHHHHHHHHHHHHHHHh
Confidence 11234678899999999995 432 246788876 7899999999999998754
No 120
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.95 E-value=2.6e-25 Score=219.76 Aligned_cols=320 Identities=24% Similarity=0.290 Sum_probs=217.7
Q ss_pred CEEEecccChhhccCCCC-cHHHHHHHHHHHHhcCC-------CCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHH
Q 011856 99 NEYIDYVGSWGPAIIGHA-DDQVLAALGETMKKGTS-------FGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMG 170 (476)
Q Consensus 99 ~~~iD~~~~~~~~~lG~~-~p~v~~a~~~~l~~~~~-------~~~~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~ 170 (476)
++|+.|+++ .+||+. ||+|.+++++.+++... .....+...++.+.++++++ .+..+++++|++++..
T Consensus 1 ~~~~~~~~~---~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~-~~~~iv~~sg~~a~~~ 76 (349)
T cd06454 1 KKVLNFCSN---DYLGLANHPEVIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFHG-KEAALVFSSGYAANDG 76 (349)
T ss_pred CCceecccC---CccccCCCHHHHHHHHHHHHHhCCCCCCcCeecCCchHHHHHHHHHHHHhC-CCCEEEeccHHHHHHH
Confidence 468999999 999995 99999999999987321 11346777899999999884 4567888899999998
Q ss_pred HHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcC--CCCeE
Q 011856 171 VLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN--KGEIA 248 (476)
Q Consensus 171 al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~--~~~~a 248 (476)
+++.. ..+++.|++. ..+|......+...|.. +..++..|.+++++++++. +++++
T Consensus 77 ~~~~~--~~~gd~Vl~~-~~~~~~~~~~~~~~g~~-------------------~~~~~~~~~~~le~~i~~~~~~~~~~ 134 (349)
T cd06454 77 VLSTL--AGKGDLIISD-SLNHASIIDGIRLSGAK-------------------KRIFKHNDMEDLEKLLREARRPYGKK 134 (349)
T ss_pred HHHHh--cCCCCEEEEe-hhhhHHHHHHHHHcCCc-------------------eEEecCCCHHHHHHHHHHhhccCCCe
Confidence 88742 2334555554 44555444333333321 2233445788999998753 24678
Q ss_pred EEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-Cc-c-ccccchhhccC---CCCchh--hhhhhcCCCC
Q 011856 249 AIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GF-R-LAYGGAQEYFG---VTPDLT--TLGKIIGGGL 320 (476)
Q Consensus 249 ~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~-r-~g~~~~~~~~g---~~pDi~--t~sK~lg~G~ 320 (476)
+|+++++++++|...+ +++|.++|++||++||+||+|. |. . .+.. ...+. ...|++ +++|.++.
T Consensus 135 ~v~~~~~~~~tG~~~~----~~~i~~~~~~~~~~livD~a~~~g~~~~~~~~--~~~~~~~~~~~~i~~~s~sK~~~~-- 206 (349)
T cd06454 135 LIVTEGVYSMDGDIAP----LPELVDLAKKYGAILFVDEAHSVGVYGPHGRG--VEEFGGLTDDVDIIMGTLGKAFGA-- 206 (349)
T ss_pred EEEEeccccCCCCccC----HHHHHHHHHHcCCEEEEEccccccccCCCCCC--hhhhccccccCcEEEeechhhhcc--
Confidence 8899998888998887 9999999999999999999995 43 2 2211 11111 134554 79999975
Q ss_pred cEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHhhhcCCceEeee
Q 011856 321 PVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGY 399 (476)
Q Consensus 321 ~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~ 399 (476)
+.|++++++++++.+......+. .+.+.++..++++.++|+.+.+ ++..++++++.+++.+.|.++ ++......
T Consensus 207 ~gG~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~----g~~~~~~~ 281 (349)
T cd06454 207 VGGYIAGSKELIDYLRSYARGFI-FSTSLPPAVAAAALAALEVLQGGPERRERLQENVRYLRRGLKEL----GFPVGGSP 281 (349)
T ss_pred cCCEEECCHHHHHHHHHhchhhh-ccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhc----CCcccCCC
Confidence 56888999998887764222222 2235678888899999988765 566778888888888888764 22111111
Q ss_pred eceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCC-------CcceEEe--CCCcHHHHHHHHHHHHHH
Q 011856 400 ISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ-------FEAGFTS--LAHSSDDIQHTITAAEKV 470 (476)
Q Consensus 400 ~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~-------~~~~~~~--~~~t~e~i~~~~~~l~~~ 470 (476)
.+.++.+.+. +.....++.+.|.++||.+.+.+ ...+|++ ...+++++++++++|+++
T Consensus 282 ~~~~~~~~~~-------------~~~~~~~~~~~L~~~gI~~~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 282 SHIIPPLIGD-------------DPAKAVAFSDALLERGIYVQAIRYPTVPRGTARLRISLSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred CCcEEEEeCC-------------ChHHHHHHHHHHHhCCceEEEecCCccCCCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 2222222211 11234678899999999987642 1356774 447999999999999864
No 121
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.95 E-value=3.4e-25 Score=221.87 Aligned_cols=334 Identities=13% Similarity=0.101 Sum_probs=209.2
Q ss_pred CCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcCCCCC-----CCHHHHHHHHHHHhhCC---CCC-eEEEeCCHHHH
Q 011856 97 DGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGA-----PCLLENVLAEMVISAVP---SIE-MVRFVNSGTEA 167 (476)
Q Consensus 97 dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~~~-----~~~~~~~la~~l~~~~~---~~e-~v~~~~sGseA 167 (476)
+|+.++||..|. ..++ .++.+.+++.+.+.....+.| ..++++++++++.+..+ +++ +|++|+|++++
T Consensus 28 ~~~~~i~l~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~Gs~~a 104 (388)
T PRK07366 28 AGKELIDLSLGS--SDLP-APAHALEAIAQSLHDPSTHGYLLFHGTLDFREAAAQWYEQRFGLAVDPETEVLPLIGSQEG 104 (388)
T ss_pred cCCCeEEeCCCC--CCCC-CCHHHHHHHHHHHhCcccCCCCCCCCCHHHHHHHHHHHHHhhCCcCCCcCeEEECCCcHHH
Confidence 355677887773 2333 478899999888764322222 23567777777765543 466 69999999999
Q ss_pred HHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCe
Q 011856 168 CMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEI 247 (476)
Q Consensus 168 ~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~ 247 (476)
+..+++. ....++.|++.+++|.++...+ ...|..+...+.....+. ..|++++++.+.. ++
T Consensus 105 l~~~~~~--l~~~gd~Vlv~~P~y~~~~~~~-~~~g~~~~~v~~~~~~~~------------~~d~~~l~~~~~~---~~ 166 (388)
T PRK07366 105 TAHLPLA--VLNPGDFALLLDPGYPSHAGGV-YLAGGQIYPMPLRAENDF------------LPVFADIPTEVLA---QA 166 (388)
T ss_pred HHHHHHH--hCCCCCEEEEcCCCCcchHHHH-HhcCCEEEEEECCCccCC------------CCCHHHHHHhhcc---cc
Confidence 9999884 2345677899999998764333 334444333222110010 0167777666643 45
Q ss_pred EEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccchhhccCCC---Cch---hhhhhhcC-CC
Q 011856 248 AAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVT---PDL---TTLGKIIG-GG 319 (476)
Q Consensus 248 a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~---pDi---~t~sK~lg-~G 319 (476)
++|++.+.+|++|.+.+.++ +++|.++|++||++||+||+|..| ..+........... +.+ -+|||.+| +|
T Consensus 167 k~i~l~~p~NPTG~~~s~~~-~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~G 245 (388)
T PRK07366 167 RLMVLSYPHNPTTAIAPLSF-FQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMGG 245 (388)
T ss_pred eEEEEeCCCCCCCccCCHHH-HHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeecccccCCcc
Confidence 66666666777888876555 999999999999999999999888 43321001111111 122 28999998 89
Q ss_pred CcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHhhhcCCceEe
Q 011856 320 LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICG 397 (476)
Q Consensus 320 ~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v 397 (476)
+|+||+++++++++.+.... ....++..+..+.++++++...++ ++.++.++++.+.+.+.|++ +++....
T Consensus 246 lRiG~~v~~~~li~~l~~~~---~~~~~~~~~~~~~~a~~~l~~~~~~l~~~~~~~~~~r~~l~~~L~~----~~~~~~~ 318 (388)
T PRK07366 246 FRIGFAIGNAQLIQALRQVK---AVVDFNQYRGILNGAIAALTGPQATVQQTVQIFRQRRDAFINALHQ----IGWPVPL 318 (388)
T ss_pred hhheehcCCHHHHHHHHHHH---hhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH----CCCcccC
Confidence 99999999999998876321 111223333344555555531111 23344444455555555543 3433334
Q ss_pred eeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHH-HHCCeEeccCC------CcceEEeCCCcHHHHHHHHHHHHHH
Q 011856 398 GYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGM-LEEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEKV 470 (476)
Q Consensus 398 ~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~~~~~~------~~~~~~~~~~t~e~i~~~~~~l~~~ 470 (476)
+..|.++++.+.... + ....++++.+ .++||.+.|+. .+.+|+++..+++++++++++|.+.
T Consensus 319 p~~g~f~~~~~~~~~----------~-~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~l~rl~~~ 387 (388)
T PRK07366 319 PEATMYVWAKLPEPW----------Q-GNSVEFCTQLVAQTGVAASPGSGFGKSGEGYVRFALVHDPDILEEAVERIAAF 387 (388)
T ss_pred CCeeEEEEEECCccc----------C-CCHHHHHHHHHHhCCEEEeCchHhCcCCCCeEEEEecCCHHHHHHHHHHHHHh
Confidence 567888888874310 0 0024566666 46799999862 2467888888999999999999875
No 122
>PRK08960 hypothetical protein; Provisional
Probab=99.95 E-value=4.6e-25 Score=220.82 Aligned_cols=330 Identities=14% Similarity=0.119 Sum_probs=212.6
Q ss_pred CEEEecccChhhccCCCCcHHHHHHHHHHHHhc-CCCC---CCCHHHHHHHHHHHhhCC---CCCeEEEeCCHHHHHHHH
Q 011856 99 NEYIDYVGSWGPAIIGHADDQVLAALGETMKKG-TSFG---APCLLENVLAEMVISAVP---SIEMVRFVNSGTEACMGV 171 (476)
Q Consensus 99 ~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~-~~~~---~~~~~~~~la~~l~~~~~---~~e~v~~~~sGseA~~~a 171 (476)
.+++++..|.. .++ .++.+.+++.+.+... ..|+ +..++++.+++++.+..+ .+++|++|+|+++++..+
T Consensus 32 ~~~i~l~~g~~--~~~-~~~~v~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~ 108 (387)
T PRK08960 32 HDVIHLEIGEP--DFT-TAEPIVAAGQAALAAGHTRYTAARGLPALREAIAGFYAQRYGVDVDPERILVTPGGSGALLLA 108 (387)
T ss_pred CCeEEeCCCCC--CCC-CCHHHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccCcHHHHHHH
Confidence 34567666632 223 4789999999888753 2222 124566777777765432 578999999999999999
Q ss_pred HHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEE
Q 011856 172 LRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAII 251 (476)
Q Consensus 172 l~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi 251 (476)
++.. ..+++.|++.+++|......+ ...|..+...+.....+. .-|++++++.+++. ...+++
T Consensus 109 ~~~~--~~~gd~vlv~~p~y~~~~~~~-~~~g~~~~~v~~~~~~~~------------~~d~~~l~~~~~~~--~~~i~i 171 (387)
T PRK08960 109 SSLL--VDPGKHWLLADPGYPCNRHFL-RLVEGAAQLVPVGPDSRY------------QLTPALVERHWNAD--TVGALV 171 (387)
T ss_pred HHHh--cCCCCEEEEcCCCCcchHHHH-HhcCCeEEEEecCcccCC------------CCCHHHHHHHhCcc--ceEEEE
Confidence 9842 345678899899998765433 333443332222111010 01788998888642 334455
Q ss_pred EcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccchhhccCCCCchh---hhhhhcC-CCCcEEEEE
Q 011856 252 LEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLT---TLGKIIG-GGLPVGAYG 326 (476)
Q Consensus 252 ~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pDi~---t~sK~lg-~G~~iG~~~ 326 (476)
++| +|++|.+.+.++ +++|.++|++||+++|+||+|.+| ..+... ......++++ +|||.+| +|+|+||++
T Consensus 172 ~~p-~NPtG~~~~~~~-~~~l~~~~~~~~~~li~De~Y~~~~~~~~~~--~~~~~~~~vi~~~S~SK~~g~~GlRiG~~~ 247 (387)
T PRK08960 172 ASP-ANPTGTLLSRDE-LAALSQALRARGGHLVVDEIYHGLTYGVDAA--SVLEVDDDAFVLNSFSKYFGMTGWRLGWLV 247 (387)
T ss_pred ECC-CCCCCcCcCHHH-HHHHHHHHHHcCCEEEEEccccccccCCCCC--ChhhccCCEEEEeecccccCCcccEEEEEE
Confidence 555 566787776555 999999999999999999999888 332211 1233445554 6999998 899999999
Q ss_pred ecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHH----HHHHHHHHHHHHHHHHHhhhcCCce-Eeeeec
Q 011856 327 GRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTY----EYLNKITGELTQGIIDAGKKAGHAI-CGGYIS 401 (476)
Q Consensus 327 ~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~----~~~~~~~~~l~~~L~~~~~~~~~~~-~v~~~g 401 (476)
+++++++.+.. .....+.+.+.+.+.++.++++. ..+++. +.++++.+.+.+.|++ +++.. ..+..|
T Consensus 248 ~~~~~~~~~~~---~~~~~~~~~s~~~q~a~~~~l~~-~~~~~l~~~~~~~~~~~~~l~~~L~~----~~~~~~~~p~g~ 319 (387)
T PRK08960 248 APPAAVPELEK---LAQNLYISASTPAQHAALACFEP-ETLAILEARRAEFARRRDFLLPALRE----LGFGIAVEPQGA 319 (387)
T ss_pred cCHHHHHHHHH---HHhhhccCCCHHHHHHHHHHhhc-CcHHHHHHHHHHHHHHHHHHHHHHHh----cCCcCCcCCCee
Confidence 99999887763 22233456688888888888752 112233 3334444444444443 44322 224456
Q ss_pred eeEEEEEecCCCcCchhhcccchHHHHHHHHHHH-HCCeEeccCC-------CcceEEeCCCcHHHHHHHHHHHHHHHH
Q 011856 402 GMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ-------FEAGFTSLAHSSDDIQHTITAAEKVKM 472 (476)
Q Consensus 402 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~-------~~~~~~~~~~t~e~i~~~~~~l~~~~~ 472 (476)
.++++.+.+... + ..++++.|+ ++||.+.|+. .+++|+++..+.+.+.+++++|.++++
T Consensus 320 ~f~~~~~~~~~~---------~---~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~~~~~~~~l~~al~~l~~~~~ 386 (387)
T PRK08960 320 FYLYADISAFGG---------D---AFAFCRHFLETEHVAFTPGLDFGRHQAGQHVRFAYTQSLPRLQEAVERIARGLR 386 (387)
T ss_pred EEEEEeccccCC---------C---HHHHHHHHHHhCCEEEcCchHhCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHh
Confidence 777877743110 1 256777765 6899999862 236788877788889999999888764
No 123
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.95 E-value=4.3e-25 Score=220.98 Aligned_cols=332 Identities=14% Similarity=0.096 Sum_probs=216.1
Q ss_pred EEEecccChhhccCCCCcHHHHHHHHHHHHhcC-CCC---CCCHHHHHHHHHHHhhCC---CCCeEEEeCCHHHHHHHHH
Q 011856 100 EYIDYVGSWGPAIIGHADDQVLAALGETMKKGT-SFG---APCLLENVLAEMVISAVP---SIEMVRFVNSGTEACMGVL 172 (476)
Q Consensus 100 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~-~~~---~~~~~~~~la~~l~~~~~---~~e~v~~~~sGseA~~~al 172 (476)
.+++|..|.. .++ .++.+.+++.+.+.... .|. +..+++.++++++.+.++ .++++++++|+++++..++
T Consensus 25 ~~i~l~~g~~--~~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~al~~~~ 101 (382)
T PRK06108 25 GVLPLWFGES--DLP-TPDFIRDAAAAALADGETFYTHNLGIPELREALARYVSRLHGVATPPERIAVTSSGVQALMLAA 101 (382)
T ss_pred CeEEecCCCC--CCC-CCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcCcceEEEeCChHHHHHHHH
Confidence 4678777742 233 47899999998887643 232 234677888888876654 4689999999999999998
Q ss_pred HHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCC-CCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEE
Q 011856 173 RLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP-GVPKGATYETLTAPFNDVSALENLFENNKGEIAAII 251 (476)
Q Consensus 173 ~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi 251 (476)
+.. ...++.|++.+++|.... ..+...|..+...+..... +. .-|+++|++.++. ++++++
T Consensus 102 ~~l--~~~gd~vl~~~p~y~~~~-~~~~~~g~~~~~v~~~~~~~~~------------~~d~~~l~~~~~~---~~~~i~ 163 (382)
T PRK06108 102 QAL--VGPGDEVVAVTPLWPNLV-AAPKILGARVVCVPLDFGGGGW------------TLDLDRLLAAITP---RTRALF 163 (382)
T ss_pred HHh--cCCCCEEEEeCCCccchH-HHHHHCCCEEEEeeCCCCCCCc------------cCCHHHHHHhcCc---cceEEE
Confidence 842 334577888888886643 3333444433222211000 00 0178999888853 456666
Q ss_pred EcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cc-cccc-h-hhccCCCCch---hhhhhhcC-CCCcEE
Q 011856 252 LEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RL-AYGG-A-QEYFGVTPDL---TTLGKIIG-GGLPVG 323 (476)
Q Consensus 252 ~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~-g~~~-~-~~~~g~~pDi---~t~sK~lg-~G~~iG 323 (476)
++..+|++|.+.+ .+.+++|.++|++||+++|+||+|.+| .. +... . ....+..+.+ .+|||.++ +|+|+|
T Consensus 164 l~~p~NPtG~~~~-~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG 242 (382)
T PRK06108 164 INSPNNPTGWTAS-RDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLG 242 (382)
T ss_pred EECCCCCCCcccC-HHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCccccee
Confidence 6555667787765 555999999999999999999999888 43 2111 1 1111111222 37999998 799999
Q ss_pred EEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeec
Q 011856 324 AYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYIS 401 (476)
Q Consensus 324 ~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g 401 (476)
|+++++++++.+.. .....+.+.+++.+.++.++|+...+ ++..++++++.+++.+.|+++. ++....+..|
T Consensus 243 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~---~~~~~~p~~g 316 (382)
T PRK06108 243 WLVAPPALGQVLEK---LIEYNTSCVAQFVQRAAVAALDEGEDFVAELVARLRRSRDHLVDALRALP---GVEVAKPDGA 316 (382)
T ss_pred eeeCCHHHHHHHHH---HHHhcccCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhCC---CCcccCCCee
Confidence 99999999888763 22334566788888888888863211 3344555555555655555431 2221122345
Q ss_pred eeEEEEEecCCCcCchhhcccchHHHHHHHHHHH-HCCeEeccCC------CcceEEeCCCcHHHHHHHHHHHHHHHH
Q 011856 402 GMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEKVKM 472 (476)
Q Consensus 402 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~------~~~~~~~~~~t~e~i~~~~~~l~~~~~ 472 (476)
.++++.+... ....++++.|+ ++||++.|+. ...+|+++..+++++++++++|+++++
T Consensus 317 ~~~~~~l~~~-------------~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~~l~ 381 (382)
T PRK06108 317 MYAFFRIPGV-------------TDSLALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFARDPARLDEAVERLRRFLA 381 (382)
T ss_pred EEEEEeCCCC-------------CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHHh
Confidence 5667666321 01246777775 5799998753 346788877799999999999998874
No 124
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.95 E-value=6.5e-25 Score=220.29 Aligned_cols=345 Identities=14% Similarity=0.051 Sum_probs=213.9
Q ss_pred CCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcCCCCCC----CHHHHHHHHHHHhhCC----CCC-eEEEeCCHHHH
Q 011856 97 DGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAP----CLLENVLAEMVISAVP----SIE-MVRFVNSGTEA 167 (476)
Q Consensus 97 dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~~~~----~~~~~~la~~l~~~~~----~~e-~v~~~~sGseA 167 (476)
.|++++|+..|. ..++ .++.+.+++.+.+......+|+ .+++..+++++.+.++ +++ +|++|+|++++
T Consensus 42 ~~~~~i~L~~g~--p~~~-~~~~~~~~l~~~~~~~~~~~Y~~~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs~~a 118 (410)
T PRK06290 42 PDMELIDMGVGE--PDEM-ADESVVEVLCEEAKKPENRGYADNGIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGSKPA 118 (410)
T ss_pred CCCCeEEcCCCC--CCCC-CCHHHHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHcCCCcCCCcceEEEccCHHHH
Confidence 455668888774 3444 5778888888776543222233 4566667776655432 344 79999999999
Q ss_pred HHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCe
Q 011856 168 CMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEI 247 (476)
Q Consensus 168 ~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~ 247 (476)
+..+++. ....++.|++.+++|.+... .+...|..+...+.....++ ..|++++++.+.. ++
T Consensus 119 l~~~~~~--~~~~gd~Vlv~~P~y~~~~~-~~~~~g~~v~~v~~~~~~~~------------~~d~~~l~~~~~~---~~ 180 (410)
T PRK06290 119 LAMLPSC--FINPGDVTLMTVPGYPVTGT-HTKYYGGEVYNLPLLEENNF------------LPDLDSIPKDIKE---KA 180 (410)
T ss_pred HHHHHHH--hCCCCCEEEEeCCCCccHHH-HHHHcCCEEEEEecCCCcCC------------cCCHHHHHHhhcc---cc
Confidence 9999884 23456778888999887533 33344444333222110010 0178888887753 46
Q ss_pred EEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccch-hhccCCC-Cch--hhhhhhcC-CCCc
Q 011856 248 AAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGA-QEYFGVT-PDL--TTLGKIIG-GGLP 321 (476)
Q Consensus 248 a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~-~~~~g~~-pDi--~t~sK~lg-~G~~ 321 (476)
++|+++..+|++|.+.+.++ +++|.++|++||++||+||+|..+ ..+.... ....+.. ..+ .+|||.++ +|+|
T Consensus 181 k~i~l~nP~NPTG~v~s~e~-l~~l~~la~~~~~~iI~DEaY~~~~~~~~~~s~~~~~~~~~~~I~i~SfSK~~g~~GlR 259 (410)
T PRK06290 181 KLLYLNYPNNPTGAVATKEF-YEEVVDFAKENNIIVVQDAAYAALTFDGKPLSFLSVPGAKEVGVEIHSLSKAYNMTGWR 259 (410)
T ss_pred eEEEEECCCCCCCcCCCHHH-HHHHHHHHHHcCeEEEEecchhhceeCCCCcChhcCCCccccEEEEeechhhcCCchhh
Confidence 66666644677888876555 999999999999999999999877 3332111 1111111 112 37999997 8999
Q ss_pred EEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeee
Q 011856 322 VGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYI 400 (476)
Q Consensus 322 iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~ 400 (476)
+||+++++++++.+... ......+.+.+++.++.++|+..+- ++..++++++.+.+.+.|++ +++....+..
T Consensus 260 iG~ii~~~~l~~~l~~~---~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~p~g 332 (410)
T PRK06290 260 LAFVVGNELIVKAFATV---KDNNDSGQFIAIQKAGIYALDHPEITEKIREKYSRRLDKLVKILNE----VGFKAEMPGG 332 (410)
T ss_pred eEeEEeCHHHHHHHHHH---HhccccCCcHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHHHHHHh----CCCeecCCCe
Confidence 99999999999887632 1222334456777777777752110 23444455555555555554 3432222334
Q ss_pred ceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCC-eEeccCCC--cceEEeCC---CcHHHHHHHHHHHHHHHHHh
Q 011856 401 SGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEG-VYFAPSQF--EAGFTSLA---HSSDDIQHTITAAEKVKMRF 474 (476)
Q Consensus 401 g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G-v~~~~~~~--~~~~~~~~---~t~e~i~~~~~~l~~~~~~~ 474 (476)
|.++|+.+.+...... ......++++.|+++| +.+.|+.. ..+|++++ .++++.++++++|++.+.++
T Consensus 333 ~f~l~v~lp~~~~~~~------~~~~~~~~~~~Ll~~~~v~~~p~~~~~~~lRi~~~~~~~~~~~~~~~~~~l~~~~~~~ 406 (410)
T PRK06290 333 TFYLYVKAPKGTKSGI------KFENAEEFSQYLIKEKLISTVPWDDAGHFLRFSVTFEAKDEEEEDRILEEIKRRLSDV 406 (410)
T ss_pred eeEEEEECCCccccCC------CCCCHHHHHHHHHHhCCEEEECCccccCeEEEEEEcccccccchhHHHHHHHHHHhhc
Confidence 5555667643210000 0012357889999886 45555432 35788765 69999999999999999876
Q ss_pred hC
Q 011856 475 LF 476 (476)
Q Consensus 475 ~~ 476 (476)
-|
T Consensus 407 ~~ 408 (410)
T PRK06290 407 EF 408 (410)
T ss_pred cc
Confidence 43
No 125
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.95 E-value=3.7e-25 Score=220.09 Aligned_cols=324 Identities=15% Similarity=0.176 Sum_probs=214.5
Q ss_pred CCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHH
Q 011856 97 DGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLA 175 (476)
Q Consensus 97 dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~~~~~~~~~~la~~l~~~~~-~~e~v~~~~sGseA~~~al~~a 175 (476)
++++++||.++. +++| .+|.+.+++.+.+.....| +.....+|.+.++++++ .+++|++++|+++++..+++..
T Consensus 30 ~~~~~i~l~~~~--~~~~-~~~~~~~a~~~~~~~~~~y--~~~~~~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~l 104 (367)
T PRK02731 30 GIADIIKLASNE--NPLG-PSPKAIEAIRAAADELHRY--PDGSGFELKAALAEKFGVDPERIILGNGSDEILELLARAY 104 (367)
T ss_pred CCCceEEecCCC--CCCC-CCHHHHHHHHHHHHhhcCC--CCCcHHHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHHh
Confidence 577899999885 4677 5788999999887653333 33334577788887775 5689999999999988877732
Q ss_pred HhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEccc
Q 011856 176 RAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPV 255 (476)
Q Consensus 176 r~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~ 255 (476)
...++.|++.+++|..+. ......|..+...+. ...+ .|++++++.++. ++++|+++.+
T Consensus 105 --~~~gd~vl~~~p~y~~~~-~~~~~~g~~~~~~~~-~~~~--------------~~~~~l~~~~~~---~~~~v~l~~p 163 (367)
T PRK02731 105 --LGPGDEVIYSEHGFAVYP-IAAQAVGAKPVEVPA-KDYG--------------HDLDAMLAAVTP---RTRLVFIANP 163 (367)
T ss_pred --cCCCCEEEEecCCHHHHH-HHHHHcCCeEEEecc-cCCC--------------CCHHHHHHHhCC---CCcEEEEeCC
Confidence 345677888888875533 223334443322111 0011 178999988863 4566766666
Q ss_pred CCCCCcccCCHHHHHHHHHHHHH--hCCEEEEeccccCc-cccc-cchhhccCCCCchh---hhhhhcC-CCCcEEEEEe
Q 011856 256 VGNSGFIAPKPDFLNAIRRITKE--NGALLIFDEVMTGF-RLAY-GGAQEYFGVTPDLT---TLGKIIG-GGLPVGAYGG 327 (476)
Q Consensus 256 ~~~~G~i~~~~~~l~~l~~l~~~--~g~llI~DEv~~g~-r~g~-~~~~~~~g~~pDi~---t~sK~lg-~G~~iG~~~~ 327 (476)
++++|.+.+ ++++.++|+. +|+++|+||+|.++ ..+. .......+..++++ +|||.+| +|+|+||+++
T Consensus 164 ~nptG~~~~----~~~l~~l~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~ 239 (367)
T PRK02731 164 NNPTGTYLP----AEEVERFLAGVPPDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNVVVTRTFSKAYGLAGLRVGYGIA 239 (367)
T ss_pred CCCCCcCCC----HHHHHHHHHhCCCCcEEEEECcHHHhccCcCcccHHHHHhhcCCEEEEeeehHhhcCcccceeeeeC
Confidence 778898888 4555555555 49999999999877 4332 22223333334544 7999998 7999999999
Q ss_pred cHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEE
Q 011856 328 RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFF 407 (476)
Q Consensus 328 ~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~ 407 (476)
++++++.+... ..+++.+++++.++.+.|+ +.++.++.++..+..++.+.+...++++.. .++.|.++++.
T Consensus 240 ~~~~~~~l~~~-----~~~~~~~~~~~~~a~~~l~---~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~-~~~~g~~~~i~ 310 (367)
T PRK02731 240 PPEIIDALNRV-----RQPFNVNSLALAAAVAALD---DDAFVEKSRALNAEGMAWLTEFLAELGLEY-IPSVGNFILVD 310 (367)
T ss_pred CHHHHHHHHHc-----cCCCCCCHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHHHHCCCcc-CCCCceEEEEE
Confidence 99999888642 1245667888888877775 233334444444344444444333344322 24568888887
Q ss_pred EecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCC----CcceEEeCCCcHHHHHHHHHHHHHHHHH
Q 011856 408 FTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ----FEAGFTSLAHSSDDIQHTITAAEKVKMR 473 (476)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~----~~~~~~~~~~t~e~i~~~~~~l~~~~~~ 473 (476)
+... ....++.+.|.++||++.++. ...+|+++. +.+++++++++|+++++.
T Consensus 311 ~~~~-------------~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~-~~~e~~~l~~aL~~~~~~ 366 (367)
T PRK02731 311 FDDG-------------KDAAEAYQALLKRGVIVRPVAGYGLPNALRITIG-TEEENRRFLAALKEFLAA 366 (367)
T ss_pred CCCC-------------CCHHHHHHHHHHCCEEEEeCCCCCCCCeEEEecC-CHHHHHHHHHHHHHHHhc
Confidence 7321 113578889999999998864 235788875 788999999999988753
No 126
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.94 E-value=4.4e-25 Score=215.84 Aligned_cols=301 Identities=13% Similarity=0.139 Sum_probs=206.1
Q ss_pred ccCCC-CcHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHHHhccC-CceEEEE
Q 011856 111 AIIGH-ADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTG-RERIIKF 187 (476)
Q Consensus 111 ~~lG~-~~p~v~~a~~~~l~~~~~~~~~~~~~~~la~~l~~~~~-~~e~v~~~~sGseA~~~al~~ar~~~~-~~~ii~~ 187 (476)
+|||. +||.+.++..+.+++ ++++.+++.+|.++++++++ .++++++++||++|+..++. ++.+ ++.|++.
T Consensus 28 ~ylgl~~~~~~~~~~~~~~~~---~~g~~~~~~~Le~~lA~~~g~~~e~ilv~~gg~~a~~~~~~---al~~~gd~Vli~ 101 (346)
T TIGR03576 28 DLTGLAGGFKIDEEDLELLET---YVGPAIFEEKVQELGREHLGGPEEKILVFNRTSSAILATIL---ALEPPGRKVVHY 101 (346)
T ss_pred ccccCCCChhHHHHHHHHHHH---hcCCHHHHHHHHHHHHHHcCCCcceEEEECCHHHHHHHHHH---HhCCCCCEEEEC
Confidence 78888 699999999999987 34677899999999999996 45899999999999999998 4444 4556543
Q ss_pred --eCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCC
Q 011856 188 --EGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPK 265 (476)
Q Consensus 188 --~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~ 265 (476)
+..+|.++...+...|.. . +.++++++++. . +++++|++++ .+++|.+.+.
T Consensus 102 ~~d~p~~~s~~~~~~l~ga~-------------------~--~~~~~l~~l~~----~-~~~~lIiitg-~s~~G~v~~~ 154 (346)
T TIGR03576 102 LPEKPAHPSIPRSCKLAGAE-------------------Y--FESDELSELKK----I-DGTSLVVITG-STMDLKVVSE 154 (346)
T ss_pred CCCCCCchhHHHHHHHcCCE-------------------E--eccCCHHHHhh----C-cCceEEEEEC-CCCCCcccCH
Confidence 345777665555444431 1 12346665432 1 2456777776 4778888764
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccCc--cccccchhhccCCCCchh--hhhhhcCCCCcEEEEEecHHHHHhhcCCCCc
Q 011856 266 PDFLNAIRRITKENGALLIFDEVMTGF--RLAYGGAQEYFGVTPDLT--TLGKIIGGGLPVGAYGGRRDIMEMVAPAGPM 341 (476)
Q Consensus 266 ~~~l~~l~~l~~~~g~llI~DEv~~g~--r~g~~~~~~~~g~~pDi~--t~sK~lg~G~~iG~~~~~~~i~~~l~~~~~~ 341 (476)
++ |++|.++|++||++||+||+|..+ .....+....++ +|++ ||||++ +|+|+||+++++++++.+.+....
T Consensus 155 ~~-L~~i~~la~~~~~~livDEAy~~~~~~~~~~~~~~~~~--~divv~s~SKal-aG~r~G~v~~~~~li~~l~~~~~~ 230 (346)
T TIGR03576 155 ED-LKRVIKQAKSKEAIVLVDDASGARVRRLYGQPPALDLG--ADLVVTSTDKLM-DGPRGGLLAGRKELVDKIKSVGEQ 230 (346)
T ss_pred HH-HHHHHHHHHHcCCEEEEECCccccccccCCCCCHHHcC--CcEEEeccchhc-cccceEEEEeCHHHHHHHHHhhcC
Confidence 44 999999999999999999999533 211111222333 4544 799965 468999999999999988753332
Q ss_pred cccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcc
Q 011856 342 YQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKK 421 (476)
Q Consensus 342 ~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~ 421 (476)
+ .++.+++.+++++++|+.+..+...+.++++.+.+.+.+++ ..+. +..++|+++.+...
T Consensus 231 ~---~~s~~~~~~~aa~~aL~~~~~~~~~~~l~~r~~~~~~~l~~----~~~~---~~~~~f~~~~~~~~---------- 290 (346)
T TIGR03576 231 F---GLEAQAPLLAAVVRALEEFELSRIRDAFKRKEEVYLRLFDK----LNVE---RTPTGFVIKGVEEE---------- 290 (346)
T ss_pred c---ccCccHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHh----CCCC---cCCCeEEEEeCCCC----------
Confidence 2 23468889999999997654345566677777766666653 2211 22344666655210
Q ss_pred cchHHHHHHHHHHHHCCeEeccCC-----CcceEEeCCCcHH---HHHHHHHHHHHHH
Q 011856 422 SETTKFARFYRGMLEEGVYFAPSQ-----FEAGFTSLAHSSD---DIQHTITAAEKVK 471 (476)
Q Consensus 422 ~~~~~~~~~~~~l~~~Gv~~~~~~-----~~~~~~~~~~t~e---~i~~~~~~l~~~~ 471 (476)
+ ....+.+.|.++||++.|+. .+++|+++...++ +++.++++|++.+
T Consensus 291 -~--~~~~~~~ll~~~gV~v~~~~~f~~~~~~vRis~~~~~~~~~~~~~~~~al~~~~ 345 (346)
T TIGR03576 291 -K--LIEIGLDLLRNYGIITITAVGMPGASKTLRFDLAAKDAERIGDDYLVEAVKDSL 345 (346)
T ss_pred -C--HHHHHHHHHHhCCEEEeCCcccCCCCCeEEEEEecChHHhcCHHHHHHHHHhcc
Confidence 0 01334566678899999853 3467888887666 8999999998764
No 127
>PRK09148 aminotransferase; Validated
Probab=99.94 E-value=1.5e-24 Score=217.97 Aligned_cols=338 Identities=14% Similarity=0.076 Sum_probs=214.7
Q ss_pred CCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcC--CCC---CCCHHHHHHHHHHHhhCC---CCC-eEEEeCCHHHH
Q 011856 97 DGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT--SFG---APCLLENVLAEMVISAVP---SIE-MVRFVNSGTEA 167 (476)
Q Consensus 97 dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~--~~~---~~~~~~~~la~~l~~~~~---~~e-~v~~~~sGseA 167 (476)
.|+.++||..+. ..++ .++.+.+++.+.+.... .|. +..+++.++++.+.+.++ .++ +|++|+|++++
T Consensus 28 ~~~~~i~l~~~~--p~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~a 104 (405)
T PRK09148 28 AGADIIDLGMGN--PDLP-TPQHIVDKLCETAQDPRTHRYSASKGIPGLRRAQAAYYARRFGVKLNPDTQVVATLGSKEG 104 (405)
T ss_pred cCCCeEEcCCCC--CCCC-CCHHHHHHHHHHHcCcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHH
Confidence 456778887762 2233 37888888887765422 222 123677777777765533 355 89999999999
Q ss_pred HHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCe
Q 011856 168 CMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEI 247 (476)
Q Consensus 168 ~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~ 247 (476)
+..+++.. ...++.|++.+++|.+....+ ...|..+..++... .+ ++++++++.++.+.+++
T Consensus 105 l~~~~~~l--~~~gd~Vl~~~P~y~~~~~~~-~~~g~~v~~v~~~~-~~--------------~~~~~l~~~~~~~~~~~ 166 (405)
T PRK09148 105 FANMAQAI--TAPGDVILCPNPSYPIHAFGF-IMAGGVIRSVPAEP-DE--------------EFFPALERAVRHSIPKP 166 (405)
T ss_pred HHHHHHHh--cCCCCEEEEcCCCCcccHHHH-HhcCCEEEEEeCCC-CC--------------CCccCHHHHHhhccccc
Confidence 99998842 345678999999998864433 23343332211110 00 12345566665433355
Q ss_pred EEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccc-hhhccCCCCc----hhhhhhhcC-CCC
Q 011856 248 AAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGG-AQEYFGVTPD----LTTLGKIIG-GGL 320 (476)
Q Consensus 248 a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~-~~~~~g~~pD----i~t~sK~lg-~G~ 320 (476)
.+++++..+|++|.+.+.++ +++|.++|++||++||+||+|..| ..+... ....+.-.++ +-+|||.++ .|+
T Consensus 167 ~~v~l~~P~NPtG~~~s~~~-l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGl 245 (405)
T PRK09148 167 IALIVNYPSNPTAYVADLDF-YKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGW 245 (405)
T ss_pred eEEEEeCCCCCCCcCCCHHH-HHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEeccccccCCcch
Confidence 66666554667787776555 999999999999999999999877 433211 1111111122 237999999 899
Q ss_pred cEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHhhhcCCceEee
Q 011856 321 PVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGG 398 (476)
Q Consensus 321 ~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~ 398 (476)
|+||+++++++++.+.. .....+++.+.+++.++.+.|+..++ +..++.++++.+.+.+.|++ +++....+
T Consensus 246 R~G~~v~~~~~i~~l~~---~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~r~~l~~~L~~----~~~~~~~p 318 (405)
T PRK09148 246 RMGFAVGNERLIAALTR---VKSYLDYGAFTPIQVAATAALNGPQDCIAEMRELYKKRRDVLVESFGR----AGWDIPPP 318 (405)
T ss_pred heeeeeCCHHHHHHHHH---HHHHhccCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH----cCCccCCC
Confidence 99999999999988863 22233456678888888877752111 22334445555555555554 34322234
Q ss_pred eeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHH-HCCeEeccCC------CcceEEeCCCcHHHHHHHHHHHHHHH
Q 011856 399 YISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEKVK 471 (476)
Q Consensus 399 ~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~------~~~~~~~~~~t~e~i~~~~~~l~~~~ 471 (476)
..|.++++.+.... . .....++.+.|+ ++||.+.|+. ...+|+++..+++++++++++|.+++
T Consensus 319 ~~g~f~~~~l~~~~-~---------~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ri~~~~~~~~l~~al~~l~~~l 388 (405)
T PRK09148 319 AASMFAWAPIPEAF-R---------HLGSLEFSKLLVEKADVAVAPGVGFGEHGDGYVRIALVENEQRIRQAARNIKRFL 388 (405)
T ss_pred CeeEEEEEECCCcc-C---------CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHH
Confidence 56778888764210 0 001246777766 6899999863 24578888888999999999999887
Q ss_pred HH
Q 011856 472 MR 473 (476)
Q Consensus 472 ~~ 473 (476)
..
T Consensus 389 ~~ 390 (405)
T PRK09148 389 SS 390 (405)
T ss_pred HH
Confidence 64
No 128
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.94 E-value=1.9e-24 Score=217.08 Aligned_cols=331 Identities=12% Similarity=0.017 Sum_probs=213.0
Q ss_pred CCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcCCCC---CCCHHHHHHHHHHHhhCC----CC-CeEEEeCCHHHHH
Q 011856 97 DGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFG---APCLLENVLAEMVISAVP----SI-EMVRFVNSGTEAC 168 (476)
Q Consensus 97 dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~~---~~~~~~~~la~~l~~~~~----~~-e~v~~~~sGseA~ 168 (476)
.|++++||..+. ..++ .++.+.+++.+.+.....|. +..+++..+++++.+.++ ++ ++|++++|+++++
T Consensus 27 ~~~~~i~l~~~~--p~~~-~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al 103 (396)
T PRK09147 27 ADLPPISLSIGE--PKHP-TPAFIKDALAANLDGLASYPTTAGLPALREAIAAWLERRYGLPALDPATQVLPVNGSREAL 103 (396)
T ss_pred cCCCeEecCCCC--CCCC-CCHHHHHHHHHHhhhhcCCCCCCCCHHHHHHHHHHHHHHhCCCcCCccceEEECCChHHHH
Confidence 377888888774 2333 47888999887765433332 234677788887766543 23 4899999999999
Q ss_pred HHHHHHHHhccC---CceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCC
Q 011856 169 MGVLRLARAFTG---RERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKG 245 (476)
Q Consensus 169 ~~al~~ar~~~~---~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~ 245 (476)
..+++.. ... ++.|++.+++|.+... .....|..+..++.....++ .-|++++++.+.+
T Consensus 104 ~~~~~~l--~~~~~~gd~vlv~~P~y~~~~~-~~~~~g~~~~~vp~~~~~~~------------~~d~~~l~~~~~~--- 165 (396)
T PRK09147 104 FAFAQTV--IDRDGPGPLVVCPNPFYQIYEG-AALLAGAEPYFLNCDPANNF------------APDFDAVPAEVWA--- 165 (396)
T ss_pred HHHHHHH--cCCCCCCCEEEEcCCCccchHH-HHHhcCCEEEEeccCccccC------------ccCHHHHHHHHhh---
Confidence 9999842 223 5678888888877543 33444544433222111110 0178889877753
Q ss_pred CeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccc--cch-hh---ccCC--CCch---hhhh
Q 011856 246 EIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAY--GGA-QE---YFGV--TPDL---TTLG 313 (476)
Q Consensus 246 ~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~--~~~-~~---~~g~--~pDi---~t~s 313 (476)
++++++++..+|++|.+.+.++ +++|.++|++||++||+||+|..| ..+. ... .. ..+. .+.+ .+||
T Consensus 166 ~~k~i~l~nP~NPTG~~~s~~~-~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~S 244 (396)
T PRK09147 166 RTQLLFVCSPGNPTGAVLPLDD-WKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLS 244 (396)
T ss_pred ccEEEEEcCCCCCcCccCCHHH-HHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEEeccc
Confidence 4566666555677888776555 999999999999999999999877 3331 110 10 1111 1222 2799
Q ss_pred hhcC-CCCcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHhhhc
Q 011856 314 KIIG-GGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKA 391 (476)
Q Consensus 314 K~lg-~G~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~ 391 (476)
|.++ +|+|+||+++++++++.+.. .....+++.+++.+.++.+++..-.. .+..+.++++.+.+.+.|++.
T Consensus 245 K~~~~~GlRiG~~~~~~~l~~~~~~---~~~~~~~~~~~~~q~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~---- 317 (396)
T PRK09147 245 KRSNVPGLRSGFVAGDAALLKKFLL---YRTYHGCAMPPAVQAASIAAWNDEAHVRENRALYREKFDAVTPILAPV---- 317 (396)
T ss_pred cccCCccceeeeecCCHHHHHHHHH---HhhhcccCCCHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHh----
Confidence 9987 79999999999999888763 11223456778888887777631100 222334444444444444432
Q ss_pred CCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHH-HCCeEeccCC------------CcceEEeCCCcHH
Q 011856 392 GHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ------------FEAGFTSLAHSSD 458 (476)
Q Consensus 392 ~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~------------~~~~~~~~~~t~e 458 (476)
+....+..|.++|+.+.. + ..++++.|+ ++||.+.|+. .+.+|+++..+++
T Consensus 318 -~~~~~p~~g~f~~~~~~~------------~---~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~~~~~~ 381 (396)
T PRK09147 318 -LDVQLPDAGFYLWAKVPG------------D---DTEFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIALVAPLA 381 (396)
T ss_pred -cCCCCCCeeEEEEEECCC------------C---HHHHHHHHHHhCCEEEeCCccccccccCCCCCCCeEEEEecCCHH
Confidence 122234578888888731 0 146777776 6799998763 2357888888999
Q ss_pred HHHHHHHHHHHHHH
Q 011856 459 DIQHTITAAEKVKM 472 (476)
Q Consensus 459 ~i~~~~~~l~~~~~ 472 (476)
++++++++|+++++
T Consensus 382 ~l~~~l~rl~~~~~ 395 (396)
T PRK09147 382 ECVEAAERIVDFCR 395 (396)
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999998764
No 129
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.94 E-value=1.2e-24 Score=218.00 Aligned_cols=336 Identities=15% Similarity=0.129 Sum_probs=218.8
Q ss_pred CEEEecccChhhccCCCCcHHHHHHHHHHHHhcC-CCC---CCCHHHHHHHHHHHhhCC---C-CCeEEEeCCHHHHHHH
Q 011856 99 NEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT-SFG---APCLLENVLAEMVISAVP---S-IEMVRFVNSGTEACMG 170 (476)
Q Consensus 99 ~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~-~~~---~~~~~~~~la~~l~~~~~---~-~e~v~~~~sGseA~~~ 170 (476)
+.+|||..+. ..++ .++.+.+++.+.+.... .|. +..++++.+++.+...++ . .++|++++|+++|+..
T Consensus 30 ~~~i~l~~~~--~~~~-~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~~~al~~ 106 (391)
T PRK07309 30 PGILKLTLGE--PDFT-TPDHVKEAAKRAIDANQSHYTGMAGLLELRQAAADFVKEKYNLDYAPENEILVTIGATEALSA 106 (391)
T ss_pred CCeEEcCCCC--CCCC-CCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHH
Confidence 4588888885 2344 36788888888776532 222 124666677777765432 2 4689999999999999
Q ss_pred HHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEE
Q 011856 171 VLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAI 250 (476)
Q Consensus 171 al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~v 250 (476)
+++.. ..+++.|++.+++|.++. ..+...|..+...+... .+. . -|++.|++.+++.+++++++
T Consensus 107 ~~~~~--~~~gd~vl~~~p~y~~~~-~~~~~~g~~~~~~~~~~-~~~---------~---~d~~~l~~~~~~~~~~~~~i 170 (391)
T PRK07309 107 SLTAI--LEPGDKVLLPAPAYPGYE-PIVNLVGAEIVEIDTTE-NDF---------V---LTPEMLEKAILEQGDKLKAV 170 (391)
T ss_pred HHHHh--cCCCCEEEEeCCCCcchH-HHHHHcCCEEEEEecCC-cCC---------c---CCHHHHHHHhhccCCCeEEE
Confidence 98842 345678888898988854 33444444333221110 000 0 17899999987654467777
Q ss_pred EEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccccc-chhhccCCCCc-h---hhhhhhcC-CCCcEE
Q 011856 251 ILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG-GAQEYFGVTPD-L---TTLGKIIG-GGLPVG 323 (476)
Q Consensus 251 i~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~-~~~~~~g~~pD-i---~t~sK~lg-~G~~iG 323 (476)
+++..+|++|.+.+..+ +++|.++|++||+++|+||+|..| ..+.. .....+ .++ + .+|||.++ +|+|+|
T Consensus 171 ~l~~P~NPtG~~~s~~~-~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~--~~~~~i~~~S~SK~~g~~GlRvG 247 (391)
T PRK07309 171 ILNYPANPTGVTYSREQ-IKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEY--LPDQTILINGLSKSHAMTGWRIG 247 (391)
T ss_pred EEECCCCCCCcCcCHHH-HHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHh--ccCCEEEEecChhhccCccceeE
Confidence 77644667787776555 999999999999999999999887 43321 111111 222 2 27999998 899999
Q ss_pred EEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeec
Q 011856 324 AYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYIS 401 (476)
Q Consensus 324 ~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g 401 (476)
|+++++++++.+... ......+.+++++.++.+.|+.... ....++++++.+++.+.|++ +++....+..|
T Consensus 248 ~~v~~~~~~~~~~~~---~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~p~gg 320 (391)
T PRK07309 248 LIFAPAEFTAQLIKS---HQYLVTAATTMAQFAAVEALTNGKDDALPMKKEYIKRRDYIIEKMTD----LGFKIIKPDGA 320 (391)
T ss_pred EEEeCHHHHHHHHHH---HhhcccCCChHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHH----CCCeecCCCee
Confidence 999999998887631 1223346678888888777753211 22345555566666665554 33322223345
Q ss_pred eeEEEEEecCCCcCchhhcccchHHHHHHHHH-HHHCCeEeccCC------CcceEEeCCCcHHHHHHHHHHHHHHHHHh
Q 011856 402 GMFGFFFTEGPVYNFEDAKKSETTKFARFYRG-MLEEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEKVKMRF 474 (476)
Q Consensus 402 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~Gv~~~~~~------~~~~~~~~~~t~e~i~~~~~~l~~~~~~~ 474 (476)
.++++.+.... .....++.+. +.++||.+.|+. ...+|+++..+.+++++++++|.+++++.
T Consensus 321 ~~~~~~l~~~~-----------~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~i~~l~~~~~~~ 389 (391)
T PRK07309 321 FYIFAKIPAGY-----------NQDSFKFLQDFARKKAVAFIPGAAFGPYGEGYVRLSYAASMETIKEAMKRLKEYMEEH 389 (391)
T ss_pred EEEEEECCCCC-----------CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHHHhh
Confidence 56666653210 0012456655 457899998864 24678888788999999999999998764
No 130
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.94 E-value=2.5e-24 Score=212.51 Aligned_cols=322 Identities=14% Similarity=0.116 Sum_probs=206.6
Q ss_pred EEecccChhhccCCCCcHHHHHHHHHHHHhcCCCCC---CCHHHHHHHHHHHhhCC---CCC-eEEEeCCHHHHHHHHHH
Q 011856 101 YIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGA---PCLLENVLAEMVISAVP---SIE-MVRFVNSGTEACMGVLR 173 (476)
Q Consensus 101 ~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~~~---~~~~~~~la~~l~~~~~---~~e-~v~~~~sGseA~~~al~ 173 (476)
++||..+.. .++ .++++.+++.+.......|.. ..+++.++++.+.+.++ +++ +|++|+|+++|+..++.
T Consensus 2 ~~~~~~g~p--~~~-~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~~~~ 78 (350)
T TIGR03537 2 LFDFGTGDP--KEP-TPPFIRKALIDAVPEVSQYPSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHFPL 78 (350)
T ss_pred eEeccCCCC--CCC-CCHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHH
Confidence 578887742 233 478899999887654323322 24667777777766543 456 89999999999999887
Q ss_pred HHHhccC----CceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEE
Q 011856 174 LARAFTG----RERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAA 249 (476)
Q Consensus 174 ~ar~~~~----~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~ 249 (476)
. +.+ ++.|++.+++|.++...+ ...|..+..++.....++ . -|++++++.+++ ++++
T Consensus 79 ~---~~~~g~~~d~Vl~~~p~y~~~~~~~-~~~g~~~~~v~~~~~~~~---------~---~d~~~l~~~~~~---~~~~ 139 (350)
T TIGR03537 79 V---FIDPEEDRRRVIFGTPGYPVYERGA-LFAGGEPTAVKLKKEDGF---------L---LRLEKVEKSILE---ETKI 139 (350)
T ss_pred H---HcCCCCCCceEEEcCCCCcchHHHH-HhcCCEEEEcccCcccCC---------c---cCHHHHHHhhhh---ccEE
Confidence 3 332 258888888888754443 344444333222111111 0 178999988864 4666
Q ss_pred EEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccchhhccCCCCchh---hhhhhcC-CCCcEEE
Q 011856 250 IILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLT---TLGKIIG-GGLPVGA 324 (476)
Q Consensus 250 vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pDi~---t~sK~lg-~G~~iG~ 324 (476)
+++++.+|++|.+.+.++ +++|.++|++||+++|+||+|..+ ..+........+. +.++ +|||.++ +|+|+||
T Consensus 140 i~i~~p~NPtG~~~~~~~-~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~-~~~i~~~s~SK~~g~~GlRiG~ 217 (350)
T TIGR03537 140 VWINYPHNPTGATAPRSY-LKETIAMCREHGIILCSDECYTEIYFGEPPHSALEVGI-ENVLAFHSLSKRSGMTGYRSGF 217 (350)
T ss_pred EEEeCCCCCcCcccCHHH-HHHHHHHHHHcCcEEEEeccccccccCCCCCchhhcCc-CCEEEEeecccccCCcccccee
Confidence 767666777888776555 999999999999999999999766 3222111111121 1222 7999997 7999999
Q ss_pred EEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCH----HHHHHHHHHHHHHHHHHHhhhcCCceEeeee
Q 011856 325 YGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGT----YEYLNKITGELTQGIIDAGKKAGHAICGGYI 400 (476)
Q Consensus 325 ~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~----~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~ 400 (476)
+++++++++.+... ....+.+.+++.+.++.+++. .+++ +++++++.+.+.+.|++ +++....+..
T Consensus 218 ~~~~~~~~~~~~~~---~~~~~~~~~~~~q~~~~~~l~---~~~~~~~~r~~l~~~~~~~~~~l~~----~g~~~~~~~g 287 (350)
T TIGR03537 218 VAGDEKLISFLRKL---RANFGVASPDFVQAAAKAAWS---DDNHVLERRKIFKRKRDLFIEFFNK----VGLEYLYPDA 287 (350)
T ss_pred eecCHHHHHHHHHH---HHhhccCCCHHHHHHHHHHhC---CcHHHHHHHHHHHHHHHHHHHHHHH----CCCcccCCCe
Confidence 99999998877631 112233455567777766653 2333 33344444444444443 3432222334
Q ss_pred ceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCC------CcceEEeCCCcHHHHHHHHHHHHH
Q 011856 401 SGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEK 469 (476)
Q Consensus 401 g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~------~~~~~~~~~~t~e~i~~~~~~l~~ 469 (476)
|.++++.+... ....++.+.|.++||++.++. .+.+|+++..+++++++++++|++
T Consensus 288 ~~~~~~~~~~~-------------~~~~~l~~~L~~~gv~v~~g~~f~~~~~~~~Ri~~~~~~~~~~~~l~~~~~ 349 (350)
T TIGR03537 288 TFYLWVKVPSG-------------IDAKDYALRLLENGIVVAPGENFGSGEEGYVRVALVPTLEECEEALRLWER 349 (350)
T ss_pred EEEEEEECCCC-------------CCHHHHHHHHHHCCEEEcCchhhCCCCCCEEEEEecCCHHHHHHHHHHHhc
Confidence 55677776421 012578888999999998753 245788877889999999998875
No 131
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=8.8e-25 Score=216.42 Aligned_cols=321 Identities=14% Similarity=0.100 Sum_probs=210.0
Q ss_pred CCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHH
Q 011856 97 DGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLA 175 (476)
Q Consensus 97 dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~~~~~~~~~~la~~l~~~~~-~~e~v~~~~sGseA~~~al~~a 175 (476)
+|.+++||..|. +.++ .+|.+.+++.+.++... +|+.....+|.+.++++++ .+++|++++|+++++..+++..
T Consensus 28 ~~~~~i~l~~~~--~~~~-~~~~~~~~~~~~~~~~~--~Y~~~~~~~lr~~ia~~~~~~~~~I~it~G~~~al~~~~~~~ 102 (357)
T PRK14809 28 DPDDLVKLSSNE--NPHG-PSPAAVEAIREAAERVH--SYPKASHADLTAALADRWDVSPEQVWLANGGDGALDYLARAM 102 (357)
T ss_pred CccceeEecCCC--CCCC-CCHHHHHHHHHHHhhhh--cCCCCCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHHh
Confidence 456789998874 4455 57889999988776532 3344445677777777776 7889999999999999998842
Q ss_pred HhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEccc
Q 011856 176 RAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPV 255 (476)
Q Consensus 176 r~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~ 255 (476)
...++.|++.+++|..+.. .....|.++...+.+...++ . .|.+++++... ++++|++++.
T Consensus 103 --~~~gd~V~v~~P~y~~~~~-~~~~~g~~~~~~~l~~~~~~-----------~-~~~~~~~~~~~----~~k~i~l~~p 163 (357)
T PRK14809 103 --LDPGDTVLVPDPGFAYYGM-SARYHHGEVREYPVSKADDF-----------E-QTADTVLDAYD----GERIVYLTSP 163 (357)
T ss_pred --cCCCCEEEEeCCChHHHHH-HHHHcCCeEEEEecccCcCC-----------C-cCHHHHHHhhc----CCcEEEEeCC
Confidence 3456778888888764332 33334443333222111111 0 14666655442 3455666666
Q ss_pred CCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccc-hhhccCCCCchhhhhhhcC-CCCcEEEEEecHHHH
Q 011856 256 VGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGG-AQEYFGVTPDLTTLGKIIG-GGLPVGAYGGRRDIM 332 (476)
Q Consensus 256 ~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~-~~~~~g~~pDi~t~sK~lg-~G~~iG~~~~~~~i~ 332 (476)
+|++|.+.+.++ +++|.++|++ +++||+||+|..| ..+... ..+..+-..-+.+|||.++ +|+|+||++++++++
T Consensus 164 ~NPTG~~~s~~~-~~~l~~~~~~-~~~iI~De~y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~ 241 (357)
T PRK14809 164 HNPTGSEIPLDE-VEALAERTDE-ETLVVVDEAYGEFAERPSAVALVEERDDVAVLRTFSKAYGLAGLRLGYAVVPEEWA 241 (357)
T ss_pred CCCCCcCCCHHH-HHHHHHhCcc-CcEEEEechhhhccCCchhHHHHhhCCCEEEEecchhHhcCcchhheeeecCHHHH
Confidence 677888887555 7777777764 7899999999888 433211 1111111122348999998 899999999999999
Q ss_pred HhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCC
Q 011856 333 EMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGP 412 (476)
Q Consensus 333 ~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~ 412 (476)
+.+... ..+++.+++++.++.++|+ ++++.++.++..+..++.+.+...... .+..|.++++.+.+
T Consensus 242 ~~~~~~-----~~~~~~~~~~~~~a~~~l~---~~~~~~~~~~~~~~~r~~l~~~L~~~~----~~~~g~f~~~~~~~-- 307 (357)
T PRK14809 242 DAYARV-----NTPFAASELACRAGLAALD---DDEHVERTVETARWAREYIREELDAPT----WESAGNFVLAEVGD-- 307 (357)
T ss_pred HHHHHh-----CCCCCCCHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHhcCcc----CCCCCCEEEEECCC--
Confidence 988631 2356778888888888774 233444444444444444444332221 24568888877621
Q ss_pred CcCchhhcccchHHHHHHHHHHHHCCeEeccCC----CcceEEeCCCcHHHHHHHHHHHHHHHH
Q 011856 413 VYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ----FEAGFTSLAHSSDDIQHTITAAEKVKM 472 (476)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~----~~~~~~~~~~t~e~i~~~~~~l~~~~~ 472 (476)
..++.+.|.++||.+.++. .+.+|+++. +++++++++++|+++++
T Consensus 308 --------------~~~~~~~l~~~gv~v~~g~~f~~~~~iRls~~-~~~~~~~~l~~L~~~l~ 356 (357)
T PRK14809 308 --------------ASAVAEAAQERGVIVRDCTSFGLPECIRITCG-TREETERAVEVLNEVLA 356 (357)
T ss_pred --------------HHHHHHHHHHCCEEEEECccCCCCCeEEEecC-CHHHHHHHHHHHHHHhc
Confidence 2467788889999999874 235788865 57899999999998764
No 132
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.94 E-value=4.9e-24 Score=214.38 Aligned_cols=343 Identities=15% Similarity=0.113 Sum_probs=214.0
Q ss_pred CCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcCCCCC-----CCHHHHHHHHHHHhhCC---CCC-eEEEeCCHHHH
Q 011856 97 DGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGA-----PCLLENVLAEMVISAVP---SIE-MVRFVNSGTEA 167 (476)
Q Consensus 97 dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~~~-----~~~~~~~la~~l~~~~~---~~e-~v~~~~sGseA 167 (476)
.|..++||..+ ++.+..++.+.+++.+.+......+| ..+++..+++++.+.++ .++ +|++|+|+++|
T Consensus 31 ~~~~~~~l~~g---~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~~~~I~it~G~~~a 107 (403)
T PRK08636 31 AGEDIIDFSMG---NPDGPTPQHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNWYKRKYNVDLDPETEVVATMGSKEG 107 (403)
T ss_pred cCCCEEEcCCc---CCCCCCCHHHHHHHHHHhcCCccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEECCChHHH
Confidence 34567888777 44444566777877776654222222 23577788888876543 456 79999999999
Q ss_pred HHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHH----HHHHHHhcC
Q 011856 168 CMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVS----ALENLFENN 243 (476)
Q Consensus 168 ~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~----~le~~l~~~ 243 (476)
+..+++. ...+++.|++.+++|.+.... ....|..+..++.....+. .+ |++ .++++++++
T Consensus 108 l~~~~~~--l~~~gd~Vlv~~P~y~~~~~~-~~~~g~~~~~v~~~~~~~~---------~~---d~~~l~~~l~~~~~~~ 172 (403)
T PRK08636 108 YVHLVQA--ITNPGDVAIVPDPAYPIHSQA-FILAGGNVHKMPLEYNEDF---------EL---DEDQFFENLEKALRES 172 (403)
T ss_pred HHHHHHH--hCCCCCEEEEcCCCCcchHHH-HHhcCCEEEEEeccccccC---------cc---ChhhhhhHHHHHHhhc
Confidence 9999984 234577888889998775433 3444544433222111100 00 444 567777654
Q ss_pred CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccc-hhhccCCCCch----hhhhhhcC
Q 011856 244 KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGG-AQEYFGVTPDL----TTLGKIIG 317 (476)
Q Consensus 244 ~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~-~~~~~g~~pDi----~t~sK~lg 317 (476)
..++++++++..+|++|.+.+.++ +++|.++|++|+++||+||+|..+ ..+... ....+.-.+|. .+|||.++
T Consensus 173 ~~~~~~i~~~~P~NPTG~~~s~~~-~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 251 (403)
T PRK08636 173 SPKPKYVVVNFPHNPTTATVEKSF-YERLVALAKKERFYIISDIAYADITFDGYKTPSILEVEGAKDVAVESYTLSKSYN 251 (403)
T ss_pred cCCceEEEEeCCCCCCCccCCHHH-HHHHHHHHHHcCcEEEEeccchhhccCCCCCCChhcCCCccccEEEEEecccccC
Confidence 445677766655677888877666 999999999999999999999877 433211 11111112232 36999997
Q ss_pred -CCCcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCceE
Q 011856 318 -GGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAIC 396 (476)
Q Consensus 318 -~G~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 396 (476)
+|+|+||+++++++++.+.. ......++.+.+.+.++..+++. .+++++++++.....++.+.+...++++...
T Consensus 252 ~~GlRiG~iv~~~~li~~~~~---~~~~~~~~~~~~~q~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 326 (403)
T PRK08636 252 MAGWRVGFVVGNKKLVGALKK---IKSWLDYGMFTPIQVAATIALDG--DQSCVEEIRETYRKRRDVLIESFANAGWELQ 326 (403)
T ss_pred CccceeeeeeCCHHHHHHHHH---HHHHhcccCChHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHHHHHCCCccc
Confidence 89999999999999888763 11222345556666666655531 1333333333333333333333333343222
Q ss_pred eeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHH-HCCeEeccCC------CcceEEeCCCcHHHHHHHHHHHHH
Q 011856 397 GGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEK 469 (476)
Q Consensus 397 v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~------~~~~~~~~~~t~e~i~~~~~~l~~ 469 (476)
.+..|.++|+.+.+.. . .....++...++ ++||.+.|+. .+.+|+++..+++++++++++|++
T Consensus 327 ~p~~g~~~~~~l~~~~-~---------~~~~~~l~~~ll~~~gV~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~~~rl~~ 396 (403)
T PRK08636 327 KPRASMFVWAKIPEPA-R---------HLGSLEFSKQLLTEAKVAVSPGIGFGEYGDEYVRIALIENENRIRQAARNIKK 396 (403)
T ss_pred CCCcceEEEEECCCcc-C---------CCCHHHHHHHHHHhCCEEEecchhhCcCCCCeEEEEecCCHHHHHHHHHHHHH
Confidence 3456788888874210 0 001256776655 6899998872 245788888899999999999999
Q ss_pred HHHH
Q 011856 470 VKMR 473 (476)
Q Consensus 470 ~~~~ 473 (476)
+++.
T Consensus 397 ~l~~ 400 (403)
T PRK08636 397 FLKE 400 (403)
T ss_pred HHHh
Confidence 8865
No 133
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.94 E-value=3e-24 Score=214.61 Aligned_cols=331 Identities=18% Similarity=0.133 Sum_probs=210.2
Q ss_pred EEEecccChhhccCCCCcHHHHHHHHHHHHhc-CCCCC---CCHHHHHHHHHHHhhCC---CCCeEEEeCCHHHHHHHHH
Q 011856 100 EYIDYVGSWGPAIIGHADDQVLAALGETMKKG-TSFGA---PCLLENVLAEMVISAVP---SIEMVRFVNSGTEACMGVL 172 (476)
Q Consensus 100 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~-~~~~~---~~~~~~~la~~l~~~~~---~~e~v~~~~sGseA~~~al 172 (476)
.++||..+. ..+. .++.+.+++.+.+... ..|.. ..++++++++++.+..+ .++++++++|+++|+..++
T Consensus 30 ~~i~l~~g~--p~~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~it~G~~~al~~~~ 106 (384)
T PRK06348 30 DIIDLSLGD--PDLI-TDESIINAAFEDAKKGHTRYTDSGGDVELIEEIIKYYSKNYDLSFKRNEIMATVGACHGMYLAL 106 (384)
T ss_pred CcEEcCCCC--CCCC-CCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCChhhEEEcCChHHHHHHHH
Confidence 467877763 2233 4677877666655432 22321 24566777777765432 5789999999999999999
Q ss_pred HHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEE
Q 011856 173 RLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIIL 252 (476)
Q Consensus 173 ~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ 252 (476)
+.. ..+++.|++.+++|.++...+ ...|..+...+.....+. .-|+++|++.++. ++++|++
T Consensus 107 ~~~--~~~gd~vlv~~p~y~~~~~~~-~~~g~~~~~~~~~~~~~~------------~~d~~~l~~~~~~---~~~~v~l 168 (384)
T PRK06348 107 QSI--LDPGDEVIIHEPYFTPYKDQI-EMVGGKPIILETYEEDGF------------QINVKKLEALITS---KTKAIIL 168 (384)
T ss_pred HHh--cCCCCEEEEeCCCCcchHHHH-HHcCCEEEEecCCcCcCC------------cCCHHHHHHhhCc---CccEEEE
Confidence 842 344567888888887754433 333433322211111111 0178999988863 4555555
Q ss_pred cccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccchh-hccCCCCch---hhhhhhcC-CCCcEEEEE
Q 011856 253 EPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQ-EYFGVTPDL---TTLGKIIG-GGLPVGAYG 326 (476)
Q Consensus 253 ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~-~~~g~~pDi---~t~sK~lg-~G~~iG~~~ 326 (476)
+..+|++|.+.+.++ +++|.++|++||++||+||+|.+| ..+..... ...+..+.+ .+|||.++ +|+|+||++
T Consensus 169 ~~p~NPtG~~~s~~~-~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~v 247 (384)
T PRK06348 169 NSPNNPTGAVFSKET-LEEIAKIAIEYDLFIISDEVYDGFSFYEDFVPMATLAGMPERTITFGSFSKDFAMTGWRIGYVI 247 (384)
T ss_pred eCCCCCCCcCCCHHH-HHHHHHHHHHCCeEEEEecccccceeCCCccchhhcCCCcCcEEEEecchhccCCccccceeee
Confidence 555667787775444 999999999999999999999988 43221111 111122232 37999999 899999999
Q ss_pred ecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeE
Q 011856 327 GRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMF 404 (476)
Q Consensus 327 ~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~ 404 (476)
+++++++.+.. .....+++.+++++.++..+|+..++ +.+.+.++++.+++.+.|+++. +.....+..|.++
T Consensus 248 ~~~~~~~~~~~---~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~~L~~~~---~~~~~~p~gg~~~ 321 (384)
T PRK06348 248 APDYIIETAKI---INEGICFSAPTISQRAAIYALKHRDTIVPLIKEEFQKRLEYAYKRIESIP---NLSLHPPKGSIYA 321 (384)
T ss_pred cCHHHHHHHHH---HHHhccCCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCC---CceeccCCeeEEE
Confidence 99999887762 22334567788999988888863211 2334444555555555555421 2222223345566
Q ss_pred EEEEecCCCcCchhhcccchHHHHHHHHHHH-HCCeEeccCC------CcceEEeCCCcHHHHHHHHHHHHHH
Q 011856 405 GFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEKV 470 (476)
Q Consensus 405 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~------~~~~~~~~~~t~e~i~~~~~~l~~~ 470 (476)
|+.+..... ...++++.|+ ++||.+.|+. .+.+|+++..+++++++++++|++.
T Consensus 322 ~~~~~~~~~------------~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~al~~l~~~ 382 (384)
T PRK06348 322 FINIKKTGL------------SSVEFCEKLLKEAHVLVIPGKAFGESGEGYIRLACTVGIEVLEEAFNRIEKM 382 (384)
T ss_pred EEecccCCC------------CHHHHHHHHHHhCCEEEcCchhhccCCCCeEEEEecCCHHHHHHHHHHHHhh
Confidence 777642111 1256777776 5699999763 2467888888999999999988753
No 134
>PRK08068 transaminase; Reviewed
Probab=99.94 E-value=2.9e-24 Score=215.18 Aligned_cols=329 Identities=14% Similarity=0.067 Sum_probs=207.0
Q ss_pred CEEEecccChhhccCCCCcHHHHHHHHHHHHhcCCCCC-----CCHHHHHHHHHHHhhCC---CCC-eEEEeCCHHHHHH
Q 011856 99 NEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGA-----PCLLENVLAEMVISAVP---SIE-MVRFVNSGTEACM 169 (476)
Q Consensus 99 ~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~~~-----~~~~~~~la~~l~~~~~---~~e-~v~~~~sGseA~~ 169 (476)
..++||..+ ++....+|.+.+++.+.+.......| ..+++.++++++.+.++ .++ +|++++|+++++.
T Consensus 32 ~~~i~l~~~---~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~g~~~~~~~~i~it~G~~~~l~ 108 (389)
T PRK08068 32 HDVINLGQG---NPDQPTPEHIVEALQEAAENPANHKYSPFRGYPFLKEAAADFYKREYGVTLDPETEVAILFGGKAGLV 108 (389)
T ss_pred CCeEEecCC---CCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHH
Confidence 346788777 55455678899999888775322222 24566777777654433 456 7999999999999
Q ss_pred HHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEE
Q 011856 170 GVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAA 249 (476)
Q Consensus 170 ~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~ 249 (476)
.+++. ...+++.|++.+++|..+.. .+...|..+..++.....++. -|++++++.+.+ ++++
T Consensus 109 ~~~~~--~~~~gd~vlv~~P~y~~~~~-~~~~~g~~~~~i~~~~~~~~~------------~d~~~l~~~~~~---~~~~ 170 (389)
T PRK08068 109 ELPQC--LMNPGDTILVPDPGYPDYLS-GVALARAQFETMPLIAENNFL------------PDYTKIPEEVAE---KAKL 170 (389)
T ss_pred HHHHH--hCCCCCEEEEcCCCCcchHH-HHHhcCCEEEEeecccccCCC------------CCHHHHHHhccc---cceE
Confidence 88773 22455778888889876543 334444433332221111110 167888887753 4555
Q ss_pred EEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccc-c-chhhccCCCCc---hhhhhhhcC-CCCcE
Q 011856 250 IILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAY-G-GAQEYFGVTPD---LTTLGKIIG-GGLPV 322 (476)
Q Consensus 250 vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~-~-~~~~~~g~~pD---i~t~sK~lg-~G~~i 322 (476)
|++...+|++|.+.+.++ +++|.++|++||+++|+||+|..| ..+. . ......+..+. +.+|||.+| +|+|+
T Consensus 171 v~l~~P~NPTG~~~s~~~-~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~GlRi 249 (389)
T PRK08068 171 MYLNYPNNPTGAVATKAF-FEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMAGWRV 249 (389)
T ss_pred EEEECCCCCCCCcCCHHH-HHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEecchhccCCcccee
Confidence 555533567888776555 999999999999999999999777 4331 1 11122222222 238999998 89999
Q ss_pred EEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeee
Q 011856 323 GAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYI 400 (476)
Q Consensus 323 G~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~ 400 (476)
||+++++++++.+...... ...+.+++.+.++.+++..-.+ +.++++++++.+.+.+.|++. ++....+..
T Consensus 250 G~~~~~~~l~~~l~~~~~~---~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~----g~~~~~~~g 322 (389)
T PRK08068 250 AFAVGNESVIEAINLLQDH---LFVSLFGAIQDAAIEALLSDQSCVAELVARYESRRNAFISACREI----GWEVDAPKG 322 (389)
T ss_pred EeEecCHHHHHHHHHHHhh---ccCCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC----CCcccCCCe
Confidence 9999999999888632111 1233445566666666631111 234555555555666655543 332222233
Q ss_pred ceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHH-CCeEeccCC------CcceEEeCCCcHHHHHHHHHHHHH
Q 011856 401 SGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLE-EGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEK 469 (476)
Q Consensus 401 g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~~------~~~~~~~~~~t~e~i~~~~~~l~~ 469 (476)
|.++++.+... ....++.+.|++ +||++.++. .+.+|+++...++.+.+++++|.+
T Consensus 323 ~~~~~v~~~~~-------------~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~l~~al~~l~~ 385 (389)
T PRK08068 323 SFFAWMPVPKG-------------YTSEQFADLLLEKAHVAVAPGNGFGEHGEGYVRVGLLTDEERLREAVERIGK 385 (389)
T ss_pred eEEEEEECCCC-------------CCHHHHHHHHHHhCCEEEecchHhCccCCCeEEEEEcCCHHHHHHHHHHHHH
Confidence 45567777421 012578888886 699998852 246788888888888888888775
No 135
>PRK08175 aminotransferase; Validated
Probab=99.94 E-value=3.7e-24 Score=214.80 Aligned_cols=337 Identities=16% Similarity=0.133 Sum_probs=216.9
Q ss_pred CCEEEecccChhhccCCCCcHHHHHHHHHHHHhcCCCCC-----CCHHHHHHHHHHHhhCC---CCC-eEEEeCCHHHHH
Q 011856 98 GNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGA-----PCLLENVLAEMVISAVP---SIE-MVRFVNSGTEAC 168 (476)
Q Consensus 98 G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~~~-----~~~~~~~la~~l~~~~~---~~e-~v~~~~sGseA~ 168 (476)
|+.++||..+ ++.+..++.+.+++.+.+.....+.| ..+++.++++.+.+.++ .++ ++++++|+++++
T Consensus 28 ~~~~i~l~~g---~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~~l 104 (395)
T PRK08175 28 GEDIIDFSMG---NPDGPTPPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKEGL 104 (395)
T ss_pred CCCeEEcCCC---CCCCCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHH
Confidence 3456777776 55555677788888877654322222 34667777777766532 345 799999999999
Q ss_pred HHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeE
Q 011856 169 MGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIA 248 (476)
Q Consensus 169 ~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a 248 (476)
..+++.. ..+++.|++.+++|......+ ...|..+..++. ..+ ..+.+++++.++...++++
T Consensus 105 ~~~~~~~--~~~gd~Vlv~~P~y~~~~~~~-~~~g~~~~~v~~--~~~-------------~~~~~~l~~~l~~~~~~~~ 166 (395)
T PRK08175 105 AHLMLAT--LDHGDTVLVPNPSYPIHIYGA-VIAGAQVRSVPL--VEG-------------VDFFNELERAIRESYPKPK 166 (395)
T ss_pred HHHHHHh--CCCCCEEEEcCCCCcchHHHH-HHcCCeEEEEec--ccC-------------CCcHHHHHHHHhhccCCce
Confidence 9887742 345677888888887654433 333332221111 000 0147888888875434677
Q ss_pred EEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccchhhccCC--CCc----hhhhhhhcC-CCC
Q 011856 249 AIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGV--TPD----LTTLGKIIG-GGL 320 (476)
Q Consensus 249 ~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~--~pD----i~t~sK~lg-~G~ 320 (476)
+|+++..+|++|.+.+.++ +++|.++|++||+++|+||+|.++ ..+... .....+ ..| +.+|||.+| +|+
T Consensus 167 ~v~i~~p~NPtG~~~~~~~-~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~-~~~~~~~~~~~~~i~~~S~SK~~g~pGl 244 (395)
T PRK08175 167 MMILGFPSNPTAQCVELEF-FEKVVALAKRYDVLVVHDLAYADIVYDGWKA-PSIMQVPGAKDVAVEFFTLSKSYNMAGW 244 (395)
T ss_pred EEEEeCCCCCCCCCCCHHH-HHHHHHHHHHcCcEEEEecchHhhccCCCCC-cchhcCCCcccCEEEEeeccccccCcch
Confidence 7777655667888776555 899999999999999999999877 433211 111111 123 237999997 899
Q ss_pred cEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHhhhcCCceEee
Q 011856 321 PVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGG 398 (476)
Q Consensus 321 ~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~ 398 (476)
|+||+++++++++.+.+ ......++.+.+.+.++.++|+..+. +.+.+.++++.+++.+.|++ .++....+
T Consensus 245 RiG~~~~~~~l~~~~~~---~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~----~~~~~~~p 317 (395)
T PRK08175 245 RIGFMVGNPELVSALAR---IKSYHDYGTFTPLQVAAIAALEGDQQCVRDIAEQYKRRRDVLVKGLHE----AGWMVEMP 317 (395)
T ss_pred hheeeeCCHHHHHHHHH---HHhhcccCCCcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH----cCCcccCC
Confidence 99999999999988763 22222455566777777777752111 22334444555555555554 34332334
Q ss_pred eeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHH-HCCeEeccCC------CcceEEeCCCcHHHHHHHHHHHHHHH
Q 011856 399 YISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEKVK 471 (476)
Q Consensus 399 ~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~------~~~~~~~~~~t~e~i~~~~~~l~~~~ 471 (476)
..|.++++.+.+... .....++++.++ ++||.+.|+. .+.+|+++..+++.+.+++++|.+++
T Consensus 318 ~~g~~i~i~l~~~~~----------~~~~~~~~~~l~~~~gv~v~p~~~f~~~~~~~lRis~~~~~~~~~~al~~l~~~l 387 (395)
T PRK08175 318 KASMYVWAKIPEPYA----------AMGSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFALIENRDRIRQAIRGIKAMF 387 (395)
T ss_pred CEEEEEEEECCcccC----------CCCHHHHHHHHHHhCCEEEeCchhhCcCCCCeEEEEeCCCHHHHHHHHHHHHHHH
Confidence 568888888853210 001256777666 6799999862 23578888888999999999999988
Q ss_pred HHh
Q 011856 472 MRF 474 (476)
Q Consensus 472 ~~~ 474 (476)
.+.
T Consensus 388 ~~~ 390 (395)
T PRK08175 388 RAD 390 (395)
T ss_pred Hhc
Confidence 753
No 136
>PRK09082 methionine aminotransferase; Validated
Probab=99.94 E-value=1.5e-24 Score=216.82 Aligned_cols=330 Identities=15% Similarity=0.129 Sum_probs=213.3
Q ss_pred CEEEecccChhhccCCCCcHHHHHHHHHHHHhcC-CCC---CCCHHHHHHHHHHHhhCC---CCC-eEEEeCCHHHHHHH
Q 011856 99 NEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT-SFG---APCLLENVLAEMVISAVP---SIE-MVRFVNSGTEACMG 170 (476)
Q Consensus 99 ~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~-~~~---~~~~~~~~la~~l~~~~~---~~e-~v~~~~sGseA~~~ 170 (476)
+.++||..|. ..++ .++.+.+++.+.++.+. .|. +..+++.++++++.+.++ ..+ ++++++|+++|+..
T Consensus 30 ~~~i~l~~g~--~~~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~~~~i~~t~G~~~al~~ 106 (386)
T PRK09082 30 HGAINLSQGF--PDFD-GPPYLVEALAYAMAAGHNQYPPMTGVAALREAIAAKTARLYGRQYDADSEITVTAGATEALFA 106 (386)
T ss_pred CCEEEecCCC--CCCC-CCHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCHHHHHHH
Confidence 3468888773 2232 47889999988876532 222 234677888888877654 233 79999999999999
Q ss_pred HHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEE
Q 011856 171 VLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAI 250 (476)
Q Consensus 171 al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~v 250 (476)
+++.. ...++.|++.+++|.+. ...+...|..+...+... .+. .-|++++++.++. ++++|
T Consensus 107 ~~~~~--~~~gd~Vli~~p~y~~~-~~~~~~~g~~~~~~~~~~-~~~------------~~d~~~l~~~~~~---~~~~v 167 (386)
T PRK09082 107 AILAL--VRPGDEVIVFDPSYDSY-APAIELAGGRAVRVALQP-PDF------------RVDWQRFAAAISP---RTRLI 167 (386)
T ss_pred HHHHH--cCCCCEEEEeCCCchhh-HHHHHHcCCEEEEEecCc-ccc------------cCCHHHHHHhcCc---cceEE
Confidence 99842 34567788877777664 333444454433322210 010 0178999988863 46666
Q ss_pred EEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccccc--chhhccCCCCchh---hhhhhcC-CCCcEE
Q 011856 251 ILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG--GAQEYFGVTPDLT---TLGKIIG-GGLPVG 323 (476)
Q Consensus 251 i~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~--~~~~~~g~~pDi~---t~sK~lg-~G~~iG 323 (476)
+++..++++|.+.+.++ +++|.++|++||+++|+||+|..+ ..+.. ......+....++ +|||.++ +|+|+|
T Consensus 168 ~l~~p~NPtG~~~~~~~-~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG 246 (386)
T PRK09082 168 ILNTPHNPSGTVWSAAD-MRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVTGWKVG 246 (386)
T ss_pred EEeCCCCCCCcCCCHHH-HHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccchhhhhh
Confidence 66666677888776555 999999999999999999999877 43321 1112222222322 7999998 799999
Q ss_pred EEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeec
Q 011856 324 AYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYIS 401 (476)
Q Consensus 324 ~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g 401 (476)
|+++++++++.+.. ......++.+.+++.++.+.++...+ +++.+.++++.+.+.+.|++ .++.......|
T Consensus 247 ~iv~~~~l~~~~~~---~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~----~~~~~~~~~g~ 319 (386)
T PRK09082 247 YCVAPAALSAEFRK---VHQYNTFTVNTPAQLALADYLRAEPEHYLELPAFYQAKRDRFRAALAN----SRFKLLPCEGT 319 (386)
T ss_pred hhhCCHHHHHHHHH---HHhhhcCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHh----CCCcccCCCee
Confidence 99999999888763 22234566788888877666642111 22334445566666666554 33322223445
Q ss_pred eeEEEEEecCCCcCchhhcccchHHHHHHHHHH-HHCCeEeccCC--------CcceEEeCCCcHHHHHHHHHHHHH
Q 011856 402 GMFGFFFTEGPVYNFEDAKKSETTKFARFYRGM-LEEGVYFAPSQ--------FEAGFTSLAHSSDDIQHTITAAEK 469 (476)
Q Consensus 402 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~~~~~~--------~~~~~~~~~~t~e~i~~~~~~l~~ 469 (476)
.++++.+.+.+ .....++++.| .++||.+.|+. .+.+|+++.++++++++++++|++
T Consensus 320 ~~~~~~~~~~~-----------~~~~~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~Ri~~~~~~~~l~~~~~rl~~ 385 (386)
T PRK09082 320 YFQLVDYSAIS-----------DLDDVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRLCFAKQEETLDAAAERLCQ 385 (386)
T ss_pred EEEEEeccccC-----------CCCHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEEEEecCCHHHHHHHHHHHhh
Confidence 66777774210 00125677765 57799998863 135789888899999999999875
No 137
>PLN02187 rooty/superroot1
Probab=99.94 E-value=5.9e-24 Score=216.14 Aligned_cols=343 Identities=11% Similarity=0.077 Sum_probs=212.0
Q ss_pred CCCEEEecccChhhccC--C--CCcHHHHHHHHHHHHhcCCCCC-C----CHHHHHHHHHHHhhCC---CCCeEEEeCCH
Q 011856 97 DGNEYIDYVGSWGPAII--G--HADDQVLAALGETMKKGTSFGA-P----CLLENVLAEMVISAVP---SIEMVRFVNSG 164 (476)
Q Consensus 97 dG~~~iD~~~~~~~~~l--G--~~~p~v~~a~~~~l~~~~~~~~-~----~~~~~~la~~l~~~~~---~~e~v~~~~sG 164 (476)
+++.+|++..| ++. . -.++++.+++.+.++.+..+.| + .++++.+++++.+.++ .+++|++++|+
T Consensus 64 ~~~~vi~l~~G---dp~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~aiA~~~~~~~~~~~~~~~I~it~G~ 140 (462)
T PLN02187 64 VNKTILPLGHG---DPSVYPCFRTCIEAEDAVVDVLRSGKGNSYGPGAGILPARRAVADYMNRDLPHKLTPEDIFLTAGC 140 (462)
T ss_pred CCCCeEECCCC---CCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCChHHHHHHHHHHHHHhcCCCCCcccEEEeCCH
Confidence 35678887776 322 1 2467899999988876433333 2 2466677777765443 57899999999
Q ss_pred HHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCC
Q 011856 165 TEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK 244 (476)
Q Consensus 165 seA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~ 244 (476)
++|+..+++.. ..+++.|++.+++|.++.. .....|..+...+.....+. . -|+++|+++++..
T Consensus 141 ~~al~~~~~~l--~~pGd~Vlv~~P~y~~y~~-~~~~~g~~~~~~~l~~~~~~---------~---~d~~~l~~~~~~~- 204 (462)
T PLN02187 141 NQGIEIVFESL--ARPNANILLPRPGFPHYDA-RAAYSGLEVRKFDLLPEKEW---------E---IDLEGIEAIADEN- 204 (462)
T ss_pred HHHHHHHHHHh--cCCCCEEEEeCCCCccHHH-HHHHcCCEEEEEeCccccCC---------c---cCHHHHHHhcCCC-
Confidence 99999999942 2456789999999987533 33444544433222110110 0 1789999887642
Q ss_pred CCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccc-hhhccCCCCchh---hhhhhcC-C
Q 011856 245 GEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGG-AQEYFGVTPDLT---TLGKIIG-G 318 (476)
Q Consensus 245 ~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~-~~~~~g~~pDi~---t~sK~lg-~ 318 (476)
..++++++|. |++|.+.+.++ +++|.++|++||++||+||+|.+| ..+..+ ....+.-...++ +|||.++ +
T Consensus 205 -~~~v~i~nP~-NPTG~v~s~e~-l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~~~~vi~l~SfSK~f~~p 281 (462)
T PLN02187 205 -TVAMVVINPN-NPCGNVYSHDH-LKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLTLAGISKGWVVP 281 (462)
T ss_pred -cEEEEEeCCC-CCCCCccCHHH-HHHHHHHHHHCCCEEEEeccccccccCCCCceeHHHhccCCcEEEEecchhhcCCc
Confidence 4456666665 66777776555 999999999999999999999887 433221 111111111232 7999988 8
Q ss_pred CCcEEEEEec-HH-H---HHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHHHHHHhhh
Q 011856 319 GLPVGAYGGR-RD-I---MEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKK 390 (476)
Q Consensus 319 G~~iG~~~~~-~~-i---~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~ 390 (476)
|||+||++++ ++ + ++.+........ .+.+.+.+++.++.++|+.-.+ ++..+.++++.+.+.+.|++
T Consensus 282 GlRiG~~v~~~p~~~~~~~~~~~~~~~~~~-~~~~~s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~r~~l~~~L~~---- 356 (462)
T PLN02187 282 GWKIGWIALNDPEGVFETTKVLQSIKQNLD-VTPDPATIIQAALPAILEKADKNFFAKKNKILKHNVDLVCDRLKD---- 356 (462)
T ss_pred cceeEEEEecCchhHHHHHHHHHHHHHhcc-ccCCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhh----
Confidence 9999999873 32 2 233321111111 1224478888888888863111 22334444455555555554
Q ss_pred cCCceE--eeeeceeEEEEEecCCCcCchhhcccchHHHHHH-HHHHHHCCeEeccCC----CcceEEeCCCcHHHHHHH
Q 011856 391 AGHAIC--GGYISGMFGFFFTEGPVYNFEDAKKSETTKFARF-YRGMLEEGVYFAPSQ----FEAGFTSLAHSSDDIQHT 463 (476)
Q Consensus 391 ~~~~~~--v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~Gv~~~~~~----~~~~~~~~~~t~e~i~~~ 463 (476)
++.... .+..|.++++.+...... ......++ .+.+.++||.+.|+. .+++|+++...++.++++
T Consensus 357 ~~~~~~~~~P~gg~fl~~~l~~~~~~--------~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~iRis~~~~~e~l~~a 428 (462)
T PLN02187 357 IPCVVCPKKPESCTYLLTKLELSLMD--------NIKDDIDFCVKLAREENLVFLPGDALGLKNWMRITIGVEAHMLEDA 428 (462)
T ss_pred CCCCcCCCCCCEeEEEEeecChhhCC--------CCCCHHHHHHHHHhhCCEEEECccccCCCCeEEEEeCCCHHHHHHH
Confidence 332211 234567777766321000 00001234 445578899999874 346899998899999999
Q ss_pred HHHHHHHHHHh
Q 011856 464 ITAAEKVKMRF 474 (476)
Q Consensus 464 ~~~l~~~~~~~ 474 (476)
+++|.+++++.
T Consensus 429 l~rL~~~l~~~ 439 (462)
T PLN02187 429 LERLKGFCTRH 439 (462)
T ss_pred HHHHHHHHHHh
Confidence 99999998754
No 138
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.94 E-value=4.3e-24 Score=213.78 Aligned_cols=330 Identities=14% Similarity=0.100 Sum_probs=206.5
Q ss_pred CCEEEecccChhhccCCCCcHHHHHHHHHHHHhcC--CCCC---CCHHHHHHHHHHHhhCC---CCC-eEEEeCCHHHHH
Q 011856 98 GNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT--SFGA---PCLLENVLAEMVISAVP---SIE-MVRFVNSGTEAC 168 (476)
Q Consensus 98 G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~--~~~~---~~~~~~~la~~l~~~~~---~~e-~v~~~~sGseA~ 168 (476)
|..++|+..+. ..++ .++.+.+++.+.+.... .|.. ..+++.++++++.+.++ +.+ .+++|+|+++++
T Consensus 30 ~~~~i~l~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~ii~t~G~~~~i 106 (385)
T PRK09276 30 GVDVISLGIGD--PDLP-TPDHIIEAMCKAVEDPENHQYPSYEGMLEFRKAVADWYKRRFGVELDPETEVISLIGSKEGI 106 (385)
T ss_pred CCCEEEecCCC--CCCC-CCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHH
Confidence 33457777763 2232 57889999988876532 2221 23566777777765533 345 588999999999
Q ss_pred HHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeE
Q 011856 169 MGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIA 248 (476)
Q Consensus 169 ~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a 248 (476)
..+++.. ...++.|++.+++|..+.. .....|..+...+.....++. -|++++++.+.. +++
T Consensus 107 ~~~~~~~--~~~gd~Vl~~~P~y~~~~~-~~~~~g~~~~~v~~~~~~g~~------------~d~~~l~~~~~~---~~~ 168 (385)
T PRK09276 107 AHIPLAF--VNPGDVVLVPDPGYPVYKI-GTIFAGGEPYFMPLKEENGFL------------PDLDAIPEDVAK---KAK 168 (385)
T ss_pred HHHHHHh--CCCCCEEEEcCCCCcChHH-HHHHcCCEEEEEecCCCCCCc------------CCHHHHHHhccc---cce
Confidence 9998842 3456789999999877543 333444443332221111110 168888777753 456
Q ss_pred EEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccc--hhhc---cCCCCchhhhhhhcC-CCCc
Q 011856 249 AIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGG--AQEY---FGVTPDLTTLGKIIG-GGLP 321 (476)
Q Consensus 249 ~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~--~~~~---~g~~pDi~t~sK~lg-~G~~ 321 (476)
+|++++.+|++|.+.+.++ +++|.++|++||+++|+||+|..| ..+... .... .+....+.+|||.+| .|+|
T Consensus 169 ~v~l~~p~NPtG~~~~~~~-~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlR 247 (385)
T PRK09276 169 LMFINYPNNPTGAVADLEF-FEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGWR 247 (385)
T ss_pred EEEEeCCCCCCCCCCCHHH-HHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecchhhcCCcchh
Confidence 6666655677888776555 999999999999999999999877 433211 1111 111223448999998 8999
Q ss_pred EEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHhhhcCCceEeee
Q 011856 322 VGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGY 399 (476)
Q Consensus 322 iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~ 399 (476)
+||+++++++++.+..... ....+.+++.+.++.++|+.... ++..++++++.+++.+.|++ .++....+.
T Consensus 248 iG~~i~~~~l~~~~~~~~~---~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~~ 320 (385)
T PRK09276 248 IGFAVGNADLIAGLGKVKS---NVDSGVFQAIQEAGIAALNGPQEVVEELRKIYQERRDILVEGLRK----LGLEVEPPK 320 (385)
T ss_pred heeeeCCHHHHHHHHHHHh---hccCCCCHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHh----CCCcccCCC
Confidence 9999999999988863211 12234456677777777642111 23334444445555555544 333222223
Q ss_pred eceeEEEEEecCCCcCchhhcccchHHHHHHHHHHH-HCCeEeccCC------CcceEEeCCCcHHHHHHHHHHHHH
Q 011856 400 ISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEK 469 (476)
Q Consensus 400 ~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~------~~~~~~~~~~t~e~i~~~~~~l~~ 469 (476)
.|.++++.+... ....++.+.|+ ++||++.++. ...+|+++..+++++.+++++|.+
T Consensus 321 ~~~~~~v~~~~~-------------~~~~~l~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~ 384 (385)
T PRK09276 321 ATFYVWAPVPKG-------------YTSAEFATLLLDKAGVVVTPGNGFGEYGEGYFRIALTVPDERIEEAVERIKK 384 (385)
T ss_pred cceEEEEECCCC-------------CCHHHHHHHHHHhCCEEECCchhhCCCCCCeEEEEeCCCHHHHHHHHHHHhh
Confidence 455567776321 01256777776 5799999863 246789888888888888888764
No 139
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.94 E-value=1.5e-24 Score=215.25 Aligned_cols=320 Identities=15% Similarity=0.069 Sum_probs=209.3
Q ss_pred cCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCC-CCCeEEE-eCCHHHHHHHHHH
Q 011856 96 IDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRF-VNSGTEACMGVLR 173 (476)
Q Consensus 96 ~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~~~~~~~~~~la~~l~~~~~-~~e~v~~-~~sGseA~~~al~ 173 (476)
.++++++||..|. +++| .+|.+.+++.+.+.... .|+.....++.+.++++++ ..+++++ ++|.++++..+++
T Consensus 31 ~~~~~~i~l~~~~--~~~~-~~~~~~~~~~~~~~~~~--~y~~~~~~~lr~~ia~~~~~~~~~i~~~~~Ga~~~i~~~~~ 105 (361)
T PRK00950 31 IDPESIIKLGSNE--NPLG-PSPKAVEAIEKELSKIH--RYPEPDAPELREALSKYTGVPVENIIVGGDGMDEVIDTLMR 105 (361)
T ss_pred CCccceEEccCCC--CCCC-CCHHHHHHHHHHHHhhc--CCCCCCHHHHHHHHHHHhCCCHHHEEEeCCCHHHHHHHHHH
Confidence 4567899998874 4566 68889999988776532 2343334778888888875 5678988 6777888888887
Q ss_pred HHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEc
Q 011856 174 LARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILE 253 (476)
Q Consensus 174 ~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~e 253 (476)
.. ..+++.|++.+++|..+. ..+...|..+...+.....+ .|++++++.++. ++++++++
T Consensus 106 ~~--~~~gd~vlv~~p~y~~~~-~~~~~~g~~~~~~~~~~~~~--------------~~~~~l~~~~~~---~~~~v~~~ 165 (361)
T PRK00950 106 TF--IDPGDEVIIPTPTFSYYE-ISAKAHGAKPVYAKREEDFS--------------LDVDSVLNAITE---KTKVIFLC 165 (361)
T ss_pred Hh--cCCCCEEEEcCCChHHHH-HHHHHcCCEEEEeecCCCCC--------------cCHHHHHHHhcc---CCCEEEEe
Confidence 42 345567888888776532 23333444332221111001 178899888753 45566655
Q ss_pred ccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCccccccc-hhhccCCCCchhhhhhhcC-CCCcEEEEEecHHH
Q 011856 254 PVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGG-AQEYFGVTPDLTTLGKIIG-GGLPVGAYGGRRDI 331 (476)
Q Consensus 254 p~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~-~~~~~g~~pDi~t~sK~lg-~G~~iG~~~~~~~i 331 (476)
.+++++|.+.+ .+++.++|+++|+++|+||+|.+|...... ....++-..-+.+|||.+| +|+|+||+++++++
T Consensus 166 ~p~nptG~~~~----~~~l~~l~~~~~~~li~De~y~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~~~ 241 (361)
T PRK00950 166 TPNNPTGNLIP----EEDIRKILESTDALVFVDEAYVEFAEYDYTPLALEYDNLIIGRTFSKVFGLAGLRIGYGFVPEWL 241 (361)
T ss_pred CCCCCCCCCcC----HHHHHHHHHHCCcEEEEECchhhhCccchHHHHHhcCCEEEEEeehHhhcCchhhcchhcCCHHH
Confidence 55677899988 788999999999999999999877311111 1111111111238999999 89999999999999
Q ss_pred HHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecC
Q 011856 332 MEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEG 411 (476)
Q Consensus 332 ~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~ 411 (476)
++.+.+. ..+++.++++++++.++++ +.+++++..+..+..++.|.+... + ...+..|.++++.+...
T Consensus 242 ~~~~~~~-----~~~~~~~~~~~~~a~~~l~---~~~~~~~~~~~~~~~r~~l~~~l~---~-~~~~~~~~~i~~~~~~~ 309 (361)
T PRK00950 242 IDYYMRA-----KTPFSLTRLSQAAAIAALS---DKEYIEKSIEHGIKSREYLYNELP---F-KVYPSEANFVLVDVTPM 309 (361)
T ss_pred HHHHHHh-----cCCCCCCHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHhhcC---e-eECCCcceEEEEECCCC
Confidence 8887642 2234567888888777774 333444444444444444443322 1 11234567777776210
Q ss_pred CCcCchhhcccchHHHHHHHHHHHHCCeEeccCC------CcceEEeCCCcHHHHHHHHHHHHHHH
Q 011856 412 PVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEKVK 471 (476)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~------~~~~~~~~~~t~e~i~~~~~~l~~~~ 471 (476)
...++++.|.++||++.++. ...+|+++. +++++++++++|++++
T Consensus 310 --------------~~~~~~~~l~~~gv~v~~~~~f~~~~~~~lRis~~-~~~~~~~l~~~L~~il 360 (361)
T PRK00950 310 --------------TAKEFCEELLKRGVIVRDCTSFRGLGDYYIRVSIG-TFEENERFLEILKEIV 360 (361)
T ss_pred --------------CHHHHHHHHHHCCEEEeeCCccCCCCCCeEEEECC-CHHHHHHHHHHHHHHh
Confidence 12578889999999998752 235788876 7789999999999875
No 140
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.94 E-value=3.8e-24 Score=214.88 Aligned_cols=340 Identities=14% Similarity=0.115 Sum_probs=213.4
Q ss_pred CEEEecccChhhccCCCCcHHHHHHHHHHHHhcC-CCCC---CCHHHHHHHHHHHhhCC---CCCeEEEeCCHHHHHHHH
Q 011856 99 NEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT-SFGA---PCLLENVLAEMVISAVP---SIEMVRFVNSGTEACMGV 171 (476)
Q Consensus 99 ~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~-~~~~---~~~~~~~la~~l~~~~~---~~e~v~~~~sGseA~~~a 171 (476)
..++||..+. +-...++++.+++.+.+.+.. .|+. ...++.++++++.+.++ .++++++++|+++|+..+
T Consensus 31 ~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~ 107 (393)
T PRK05764 31 RDVISLGAGE---PDFDTPEHIKEAAIEALDDGKTKYTPAAGIPELREAIAAKLKRDNGLDYDPSQVIVTTGAKQALYNA 107 (393)
T ss_pred CCEEEeCCCC---CCCCCCHHHHHHHHHHHhcCCCCcCCCCChHHHHHHHHHHHHHHhCCCCCHHHEEEeCCcHHHHHHH
Confidence 3467888774 222357899999988886532 2321 24556677777655443 467899999999999998
Q ss_pred HHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEE
Q 011856 172 LRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAII 251 (476)
Q Consensus 172 l~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi 251 (476)
+... ...++.|++.+++|.++.. .....|..+..++.....+. .-|++.+++.++. ++++|+
T Consensus 108 ~~~~--~~~gd~vl~~~p~y~~~~~-~~~~~g~~~~~~~~~~~~~~------------~~d~~~l~~~l~~---~~~~v~ 169 (393)
T PRK05764 108 FMAL--LDPGDEVIIPAPYWVSYPE-MVKLAGGVPVFVPTGEENGF------------KLTVEQLEAAITP---KTKALI 169 (393)
T ss_pred HHHh--cCCCCEEEecCCCCcchHH-HHHHcCCEEEEEecCcccCC------------cCCHHHHHHhhCc---cceEEE
Confidence 8852 3456778888888876433 33344443332221100010 0168999988853 455555
Q ss_pred EcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccccc--chhhc-cCCCCc---hhhhhhhcC-CCCcEE
Q 011856 252 LEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG--GAQEY-FGVTPD---LTTLGKIIG-GGLPVG 323 (476)
Q Consensus 252 ~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~--~~~~~-~g~~pD---i~t~sK~lg-~G~~iG 323 (476)
+...+|++|.+.+.++ +++|.++|++||+++|+||+|..+ ..+.. ...+. .+.... +.+|||.++ .|+|+|
T Consensus 170 ~~~p~NPtG~~~~~~~-~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG 248 (393)
T PRK05764 170 LNSPSNPTGAVYSPEE-LEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFSKAYAMTGWRLG 248 (393)
T ss_pred EECCCCCCCcccCHHH-HHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEecCcccccCccceeE
Confidence 5555566788776554 999999999999999999999877 33321 11111 122122 237999999 899999
Q ss_pred EEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeec
Q 011856 324 AYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYIS 401 (476)
Q Consensus 324 ~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g 401 (476)
|+++++++++.+.. .....+.+.+++++.++.+.|+...+ +++.++++++.+.+++.|++. . ++....+..|
T Consensus 249 ~i~~~~~~~~~~~~---~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~--g~~~~~~~g~ 322 (393)
T PRK05764 249 YAAGPKELIKAMSK---LQSHSTSNPTSIAQYAAVAALNGPQDEVEEMRQAFEERRDLMVDGLNEI-P--GLECPKPEGA 322 (393)
T ss_pred EEecCHHHHHHHHH---HHhhcccCCChHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhhC-C--CCcccCCCcc
Confidence 99999999888763 22223456788888888887752111 233444444455555555442 0 2222223334
Q ss_pred eeEEEEEecCCCcCchhhcccchHHHHHHHHHHH-HCCeEeccCCC----cceEEeCCCcHHHHHHHHHHHHHHHHHh
Q 011856 402 GMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQF----EAGFTSLAHSSDDIQHTITAAEKVKMRF 474 (476)
Q Consensus 402 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~~----~~~~~~~~~t~e~i~~~~~~l~~~~~~~ 474 (476)
.++++.+...... ......++...++ ++||.+.++.. +.+|+++.++++++++++++|.+++++.
T Consensus 323 ~~~~~~~~~~~~~--------~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~vRis~~~~~~~~~~~i~~l~~~~~~~ 392 (393)
T PRK05764 323 FYVFPNVSKLLGK--------SITDSLEFAEALLEEAGVAVVPGIAFGAPGYVRLSYATSLEDLEEGLERIERFLESL 392 (393)
T ss_pred eEEEEeccccccc--------ccCCHHHHHHHHHHhCCEEEccccccCCCCEEEEEecCCHHHHHHHHHHHHHHHHhh
Confidence 5666666431100 0001246777765 57999988642 4679999899999999999999988753
No 141
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.94 E-value=3e-24 Score=215.24 Aligned_cols=337 Identities=14% Similarity=0.053 Sum_probs=210.7
Q ss_pred EEEecccChhhccCCCCcHHHHHHHHHHHHhcC-CCC---CCCHHHHHHHHHHHhhCC---CCCeEEEeCCHHHHHHHHH
Q 011856 100 EYIDYVGSWGPAIIGHADDQVLAALGETMKKGT-SFG---APCLLENVLAEMVISAVP---SIEMVRFVNSGTEACMGVL 172 (476)
Q Consensus 100 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~-~~~---~~~~~~~~la~~l~~~~~---~~e~v~~~~sGseA~~~al 172 (476)
.++||..+. ..++ .++.+.+++.+.+.... .|+ +..++++++++++.+.++ .++++++++|+++|+..++
T Consensus 34 ~~i~l~~~~--~~~~-~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~ 110 (391)
T PRK08361 34 NVISLGIGE--PDFD-TPKNIKEAAKRALDEGWTHYTPNAGIPELREAIAEYYKKFYGVDVDVDNVIVTAGAYEATYLAF 110 (391)
T ss_pred CeEEcCCCC--CCCC-CCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCChHHHHHHHH
Confidence 468887774 3333 36889999888776532 221 124566667776655432 4789999999999999998
Q ss_pred HHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEE
Q 011856 173 RLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIIL 252 (476)
Q Consensus 173 ~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ 252 (476)
+.. ...++.|++.+++|.+.. ..+...|..+...++....+. ..|++++++.++. +++++++
T Consensus 111 ~~l--~~~g~~Vlv~~p~y~~~~-~~~~~~g~~~~~v~~~~~~~~------------~~d~~~l~~~i~~---~~~~v~i 172 (391)
T PRK08361 111 ESL--LEEGDEVIIPDPAFVCYV-EDAKIAEAKPIRIPLREENEF------------QPDPDELLELITK---RTRMIVI 172 (391)
T ss_pred HHh--cCCCCEEEEcCCCCcccH-HHHHHcCCEEEEEecCCccCC------------CCCHHHHHHhccc---ccEEEEE
Confidence 842 345677888888887753 344444544333222111000 0278999988874 4556666
Q ss_pred cccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccccc-chhhccCCCCch--hhhhhhcC-CCCcEEEEEe
Q 011856 253 EPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG-GAQEYFGVTPDL--TTLGKIIG-GGLPVGAYGG 327 (476)
Q Consensus 253 ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~-~~~~~~g~~pDi--~t~sK~lg-~G~~iG~~~~ 327 (476)
+..+|++|.+.+.++ +++|.++|+++++++|+||+|.+| ..+.. .....+....++ .++||.++ .|+|+||+++
T Consensus 173 ~~p~NPtG~~~~~~~-~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~GlRiG~~~~ 251 (391)
T PRK08361 173 NYPNNPTGATLDKEV-AKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYAPDNTILANSFSKTFAMTGWRLGFVIA 251 (391)
T ss_pred eCCCCCCCcCcCHHH-HHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcCCCCEEEEecCchhcCCcHhhhhhhcc
Confidence 555667887776544 899999999999999999999877 43321 111111111222 27999999 8999999999
Q ss_pred cHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCceEee-eeceeEEE
Q 011856 328 RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGG-YISGMFGF 406 (476)
Q Consensus 328 ~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~-~~g~~~~i 406 (476)
++++++.+.. .....+++.+.+.+.++.++|+.-...++.++.++..+..++.+.+.....+...... ..|.++++
T Consensus 252 ~~~~~~~~~~---~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~p~g~~~~~~ 328 (391)
T PRK08361 252 PEQVIKDMIK---LHAYIIGNVASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEMPHIKVFEPKGAFYVFA 328 (391)
T ss_pred CHHHHHHHHH---HHhhhccCCChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhCCCCeecCCCEEEEEEE
Confidence 9999887752 1122345667788888777775321112333333333333333333333332222223 33556777
Q ss_pred EEecCCCcCchhhcccchHHHHHHHHHHH-HCCeEeccCC------CcceEEeCCCcHHHHHHHHHHHHHHHHH
Q 011856 407 FFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEKVKMR 473 (476)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~------~~~~~~~~~~t~e~i~~~~~~l~~~~~~ 473 (476)
.+..... ...++.+.|+ ++||.+.|+. ...+|+++..+++++++++++|++++++
T Consensus 329 ~l~~~~~------------~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~al~~l~~~l~~ 390 (391)
T PRK08361 329 NIDETGM------------SSEDFAEWLLEKARVVVIPGTAFGKAGEGYIRISYATSKEKLIEAMERMEKALEE 390 (391)
T ss_pred ECCCCCC------------CHHHHHHHHHHhCCEEEcCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHHhc
Confidence 7642111 1246777776 5799998863 2457888888999999999999998865
No 142
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=2.8e-24 Score=213.95 Aligned_cols=328 Identities=13% Similarity=0.118 Sum_probs=209.8
Q ss_pred CEEEecccChhhccCCCCcHHHHHHHHHHHHhcC-CCCCCC----HHHHHHHHHHHhhC-----CCCCeEEEeCCHHHHH
Q 011856 99 NEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT-SFGAPC----LLENVLAEMVISAV-----PSIEMVRFVNSGTEAC 168 (476)
Q Consensus 99 ~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~-~~~~~~----~~~~~la~~l~~~~-----~~~e~v~~~~sGseA~ 168 (476)
+.++|+..|. ++++ .+|.+.+++.+.+..+. ...|+. +++.++++++.+.. -.+++|++|+|+++++
T Consensus 28 ~~~~~l~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~Y~~~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga~~al 104 (374)
T PRK02610 28 IQLDRLDTNE--FPYD-LPPDLKQKLAWLYQQGIESNRYPDGGHEALKQAIAEYVNESAAGSSQITPANISVGNGSDELI 104 (374)
T ss_pred cceeEecCCC--CCCC-CCHHHHHHHHHHHhhcccccCCCCCchHHHHHHHHHHhCccccccCCCCHHHEEEcCChHHHH
Confidence 4588888874 3333 57899999998777632 122343 34455555554332 1467899999999999
Q ss_pred HHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCC-CCCCCCCCCCceeeccCCCHHHHHHHHhcC-CCC
Q 011856 169 MGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPD-SPGVPKGATYETLTAPFNDVSALENLFENN-KGE 246 (476)
Q Consensus 169 ~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~~~le~~l~~~-~~~ 246 (476)
..++... ...+++.|++.+++|.++. ..+...|..+...+... ..++ |+++|++.+++. ..+
T Consensus 105 ~~~~~~~-~~~g~~~Vlv~~P~y~~~~-~~~~~~g~~~~~~~~~~~~~~~--------------d~~~l~~~~~~~~~~~ 168 (374)
T PRK02610 105 RSLLIAT-CLGGEGSILVAEPTFSMYG-ILAQTLGIPVVRVGRDPETFEI--------------DLAAAQSAIEQTQNPP 168 (374)
T ss_pred HHHHHHH-cCCCCCeEEEcCCChHHHH-HHHHHcCCEEEEecCCcccCCC--------------CHHHHHHHHHhhcCCC
Confidence 8777631 2234347899999997644 34444555443322211 1111 789999988641 125
Q ss_pred eEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccchhhccCCCCch---hhhhhhcC-CCCc
Q 011856 247 IAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDL---TTLGKIIG-GGLP 321 (476)
Q Consensus 247 ~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pDi---~t~sK~lg-~G~~ 321 (476)
+++|++.+.+|++|.+.+.++ +++|.++| ++++||+||+|..| ..... ....-.+++ -+|||.+| +|+|
T Consensus 169 ~k~i~l~~P~NPTG~~~s~~~-l~~l~~~~--~~~~iI~De~Y~~~~~~~~~---~~~~~~~~~ivi~SfSK~~g~~GlR 242 (374)
T PRK02610 169 VRVVFVVHPNSPTGNPLTAAE-LEWLRSLP--EDILVVIDEAYFEFSQTTLV---GELAQHPNWVILRTFSKAFRLAAHR 242 (374)
T ss_pred ceEEEEeCCCCCCCCCCCHHH-HHHHHhcc--CCcEEEEeccccccCccchH---HHHhcCCCEEEEEecchhccCcccc
Confidence 677766566778888887665 88888877 49999999999887 32111 111112333 37999997 8999
Q ss_pred EEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeec
Q 011856 322 VGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYIS 401 (476)
Q Consensus 322 iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g 401 (476)
+||+++++++++.+.... ..++.+.+++.++.++++.. +.+.+++++..+. ++.+.+....++.....+..|
T Consensus 243 iG~~v~~~~l~~~l~~~~-----~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~-r~~l~~~L~~~~~~~~~p~~g 314 (374)
T PRK02610 243 VGYAIGHPELIAVLEKVR-----LPYNLPSFSQLAAQLALEHR--QELLAAIPEILQE-RDRLYQALQELPQLRVWPSAA 314 (374)
T ss_pred eeeeecCHHHHHHHHHhc-----CCCCCCHHHHHHHHHHhcCH--HHHHHHHHHHHHH-HHHHHHHHHhCCCcEeCCCcc
Confidence 999999999998886421 23556788888887777522 2333333333322 233333333332222235667
Q ss_pred eeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCCcceEEeCCCcHHHHHHHHHHHHHHHHHh
Q 011856 402 GMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHTITAAEKVKMRF 474 (476)
Q Consensus 402 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~~~~~t~e~i~~~~~~l~~~~~~~ 474 (476)
.++++.+... ....++.+.|.++||.+.+. .+.+|+++.. ++++++++++|++++..+
T Consensus 315 ~f~~~~l~~~-------------~~~~~~~~~l~~~gi~v~~~-~~~lRls~~~-~~~~~~~l~~l~~~l~~~ 372 (374)
T PRK02610 315 NFLYLRLSQD-------------AALAALHQALKAQGTLVRHT-GGGLRITIGT-PEENQRTLERLQAALTQL 372 (374)
T ss_pred eEEEEeCCCC-------------CCHHHHHHHHHHCCEEEEeC-CCeEEEeCCC-HHHHHHHHHHHHHHHhhc
Confidence 7888776421 11256788889999999864 3578998775 567899999999988754
No 143
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.94 E-value=4.8e-24 Score=213.31 Aligned_cols=330 Identities=15% Similarity=0.112 Sum_probs=208.0
Q ss_pred CCEEEecccChhhccCCCCcHHHHHHHHHHHHhcC--CCCC---CCHHHHHHHHHHHhhCC---CCC-eEEEeCCHHHHH
Q 011856 98 GNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT--SFGA---PCLLENVLAEMVISAVP---SIE-MVRFVNSGTEAC 168 (476)
Q Consensus 98 G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~--~~~~---~~~~~~~la~~l~~~~~---~~e-~v~~~~sGseA~ 168 (476)
|..++||..|. ..++ .++.+.+++.+.+.... .|.. ..+++.++++++.+.++ ..+ +|++++|+++++
T Consensus 28 ~~~~~~l~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~~l 104 (383)
T TIGR03540 28 GVDVISLGIGD--PDLP-TPKHIVEALCKAAENPENHRYPSYEGMLAYRQAVADWYKRRFGVELDPETEVLSLIGSKEGI 104 (383)
T ss_pred CCCeEEeCCCC--CCCC-CCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCeEEECCCcHHHH
Confidence 34556777763 2333 47889999988776422 2222 23567777777765533 344 689999999999
Q ss_pred HHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeE
Q 011856 169 MGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIA 248 (476)
Q Consensus 169 ~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a 248 (476)
..+++.. ...++.|++.+++|.++.. .....|..+..++.....++ .-|++++++.+.. +++
T Consensus 105 ~~~~~~~--~~~gd~vlv~~P~y~~~~~-~~~~~G~~v~~v~~~~~~g~------------~~d~~~l~~~~~~---~~~ 166 (383)
T TIGR03540 105 AHIPLAF--VNPGDIVLVPDPGYPVYRI-GTLFAGGEPYEMPLKEENGF------------LPDFDAIPEDIAK---KAK 166 (383)
T ss_pred HHHHHHh--CCCCCEEEEeCCCCcchHH-HHHhcCCEEEEEecCcccCC------------ccCHHHHHhhccc---cce
Confidence 9999842 3456778888999887544 34444544433222111111 0178888887753 466
Q ss_pred EEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccccc-chh-hccC---CCCchhhhhhhcC-CCCc
Q 011856 249 AIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG-GAQ-EYFG---VTPDLTTLGKIIG-GGLP 321 (476)
Q Consensus 249 ~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~-~~~-~~~g---~~pDi~t~sK~lg-~G~~ 321 (476)
+|+++..+|++|.+.+.++ +++|.++|++||++||+||+|..+ ..+.. ... ...+ ....+.+|||.+| +|+|
T Consensus 167 ~v~i~~P~NPtG~~~~~~~-~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlR 245 (383)
T TIGR03540 167 LMFINYPNNPTGAVAPLKF-FKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWR 245 (383)
T ss_pred EEEEeCCCCCcCccCCHHH-HHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEecccccCCccce
Confidence 6666644677888876555 999999999999999999999877 43311 111 1111 1122348999998 8999
Q ss_pred EEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHhhhcCCceEeee
Q 011856 322 VGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGY 399 (476)
Q Consensus 322 iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~ 399 (476)
+||+++++++++.+.... .....+.+.+.+.++.++|+...+ ++..+.++++.+.+.+.|++ +++....+.
T Consensus 246 iG~~i~~~~l~~~~~~~~---~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~----~~~~~~~~~ 318 (383)
T TIGR03540 246 IGMAVGNADLIAGLGKVK---TNVDSGVFQAIQYAAIAALNGPQDVVKEIRKIYQRRRDLLLEALKK----IGIDVEKPK 318 (383)
T ss_pred eeEEeCCHHHHHHHHHHH---HhcccCCChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHh----CCCEecCCC
Confidence 999999999988776311 112234466777777777653211 22334444455555555544 343222233
Q ss_pred eceeEEEEEecCCCcCchhhcccchHHHHHHHHHHH-HCCeEeccCC------CcceEEeCCCcHHHHHHHHHHHHH
Q 011856 400 ISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEK 469 (476)
Q Consensus 400 ~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~------~~~~~~~~~~t~e~i~~~~~~l~~ 469 (476)
.|.++++.+.+. ....++...|+ ++||.+.++. .+.+|+++..+++++++++++|.+
T Consensus 319 ~~~~~~~~l~~~-------------~~~~~~~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~ 382 (383)
T TIGR03540 319 ATFYVWVPVPEG-------------YTSAEFAARLLEETGVVVTPGVGFGEYGEGYIRISLTVPDERLEEAVARIKK 382 (383)
T ss_pred cceEEEEECCCC-------------CCHHHHHHHHHHHCCEEEecchhhCccCCCeEEEEecCCHHHHHHHHHHHhh
Confidence 455677776421 11256777775 6799999862 246889888888888888888764
No 144
>PRK12414 putative aminotransferase; Provisional
Probab=99.94 E-value=7.2e-24 Score=211.78 Aligned_cols=329 Identities=13% Similarity=0.119 Sum_probs=211.3
Q ss_pred EEEecccChhhccCCCCcHHHHHHHHHHHHhc-CCCC---CCCHHHHHHHHHHHhhCC-C---CCeEEEeCCHHHHHHHH
Q 011856 100 EYIDYVGSWGPAIIGHADDQVLAALGETMKKG-TSFG---APCLLENVLAEMVISAVP-S---IEMVRFVNSGTEACMGV 171 (476)
Q Consensus 100 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~-~~~~---~~~~~~~~la~~l~~~~~-~---~e~v~~~~sGseA~~~a 171 (476)
.+|||..|. ..++ .++.+.+++.+.+... ..|+ +..++++++++++.+.++ . .+++++++|+++++..+
T Consensus 30 ~~i~l~~g~--p~~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~al~~~ 106 (384)
T PRK12414 30 DALNLSQGA--PNFA-PDPALVEGVARAMRDGHNQYAPMAGIAALREALAEKTERLYGARYDPASEVTVIASASEGLYAA 106 (384)
T ss_pred CeEEcCCCC--CCCC-CCHHHHHHHHHHHHhCCCCcCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHHHHHH
Confidence 457777774 2333 4788999998877653 2232 234777888888887764 2 25899999999999999
Q ss_pred HHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEE
Q 011856 172 LRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAII 251 (476)
Q Consensus 172 l~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi 251 (476)
++.. ..+++.|++.+++|.+... .....|..+...+... .+. .-|++.|++.++. ++++|+
T Consensus 107 ~~~l--~~~gd~Vlv~~p~y~~~~~-~~~~~g~~~~~v~~~~-~~~------------~~d~~~l~~~l~~---~~~~v~ 167 (384)
T PRK12414 107 ISAL--VHPGDEVIYFEPSFDSYAP-IVRLQGATPVAIKLSP-EDF------------RVNWDEVAAAITP---RTRMII 167 (384)
T ss_pred HHHh--cCCCCEEEEeCCCccchHH-HHHHcCCEEEEEecCc-ccc------------ccCHHHHHhhcCc---ccEEEE
Confidence 9842 3566888998988876433 3333344332221110 010 0178999988863 566666
Q ss_pred EcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccc--hhhccCCCCch---hhhhhhcC-CCCcEEE
Q 011856 252 LEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGG--AQEYFGVTPDL---TTLGKIIG-GGLPVGA 324 (476)
Q Consensus 252 ~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~--~~~~~g~~pDi---~t~sK~lg-~G~~iG~ 324 (476)
++..+|++|.+.+.++ +++|.++|++||+++|+||+|..| ..+... ...+.+...++ .+|||.++ +|+|+||
T Consensus 168 i~~p~NPTG~~~s~~~-~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRiG~ 246 (384)
T PRK12414 168 VNTPHNPSATVFSAAD-LARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGWRVGY 246 (384)
T ss_pred EcCCCCCCCcCCCHHH-HHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCccceEEE
Confidence 6666677888776444 999999999999999999999876 333211 11111222222 27999998 8999999
Q ss_pred EEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeecee
Q 011856 325 YGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGM 403 (476)
Q Consensus 325 ~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~ 403 (476)
+++++++++.+.. .....+++.+.+++.++.+.|+.-.. .+..+.++++.+.+.+.|++. ++.......|.+
T Consensus 247 ~v~~~~l~~~l~~---~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~----g~~~~~~~gg~~ 319 (384)
T PRK12414 247 CLAPAELMDEIRK---VHQFMVFSADTPMQHAFAEALAEPASYLGLGAFYQRKRDLLARELAGS----RFELLPSEGSFF 319 (384)
T ss_pred EecCHHHHHHHHH---HHhheecCCCcHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhC----CCeecCCCcceE
Confidence 9999999888763 22234567788888888777642110 123445556666666655543 322222234455
Q ss_pred EEEEEecCCCcCchhhcccchHHHHHHH-HHHHHCCeEeccCC--------CcceEEeCCCcHHHHHHHHHHHHH
Q 011856 404 FGFFFTEGPVYNFEDAKKSETTKFARFY-RGMLEEGVYFAPSQ--------FEAGFTSLAHSSDDIQHTITAAEK 469 (476)
Q Consensus 404 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~Gv~~~~~~--------~~~~~~~~~~t~e~i~~~~~~l~~ 469 (476)
+++.+.... +. ...++. ..|.++||.+.|+. .+.+|+++..+++++++++++|.+
T Consensus 320 ~~~~~~~~~----------~~-~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis~~~~~~~~~~~~~rl~~ 383 (384)
T PRK12414 320 MLARFRHFS----------DE-SDSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRLSFSKDDATLVEGARRLCS 383 (384)
T ss_pred EEEcccccC----------CC-CHHHHHHHHHHhCCEEEecchhhcCCCCCCCEEEEEecCCHHHHHHHHHHHhh
Confidence 555653210 00 013444 55668899999863 235888888899999999999864
No 145
>PRK08363 alanine aminotransferase; Validated
Probab=99.94 E-value=5.7e-24 Score=213.73 Aligned_cols=342 Identities=14% Similarity=0.042 Sum_probs=209.4
Q ss_pred CCEEEecccChhhc-cCCCCcHHHHHHHHHHHHhcCC-CC---CCCHHHHHHHHHHHhhCC---CCCeEEEeCCHHHHHH
Q 011856 98 GNEYIDYVGSWGPA-IIGHADDQVLAALGETMKKGTS-FG---APCLLENVLAEMVISAVP---SIEMVRFVNSGTEACM 169 (476)
Q Consensus 98 G~~~iD~~~~~~~~-~lG~~~p~v~~a~~~~l~~~~~-~~---~~~~~~~~la~~l~~~~~---~~e~v~~~~sGseA~~ 169 (476)
|..++|+..|.... .++ .++.+.+++.+.+..... |+ +..++++.+++++...++ ++++|++++|+++|+.
T Consensus 29 ~~~~i~l~~g~p~~~~~~-p~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~ 107 (398)
T PRK08363 29 GIKVIRLNIGDPVKFDFQ-PPEHMKEAYCRAIKEGHNYYGPSEGLPELREAIVKREKRKNGVDITPDDVRVTAAVTEALQ 107 (398)
T ss_pred CCCeEEEeCCCCCcCCCC-CCHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHH
Confidence 56788888884321 233 578999999888865422 22 123555666666654433 5789999999999999
Q ss_pred HHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEE
Q 011856 170 GVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAA 249 (476)
Q Consensus 170 ~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~ 249 (476)
.+++.. ...++.|++.+++|.+....+ ...|..+.........+. .-|++.+++.+.. ++++
T Consensus 108 ~~~~~~--~~~gd~Vl~~~p~y~~~~~~~-~~~g~~~v~~~~~~~~~~------------~~d~~~l~~~~~~---~~~~ 169 (398)
T PRK08363 108 LIFGAL--LDPGDEILIPGPSYPPYTGLV-KFYGGVPVEYRTIEEEGW------------QPDIDDIRKKITE---KTKA 169 (398)
T ss_pred HHHHHh--CCCCCEEEEcCCCCcchHHHH-HHcCCEEEEeccccccCC------------cCCHHHHHhhCCc---ceEE
Confidence 999842 345677888888887754433 333322211100000111 0178888888753 4555
Q ss_pred EEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccchhhccCCCCchh---hhhhhcC-CCCcEEE
Q 011856 250 IILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLT---TLGKIIG-GGLPVGA 324 (476)
Q Consensus 250 vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pDi~---t~sK~lg-~G~~iG~ 324 (476)
|++...+|++|.+.+.++ +++|.++|++||+++|+||+|..+ ..+.......+.-..+++ +|||.++ +|+|+||
T Consensus 170 v~l~~p~NPtG~~~~~~~-~~~l~~~a~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~ 248 (398)
T PRK08363 170 IAVINPNNPTGALYEKKT-LKEILDIAGEHDLPVISDEIYDLMTYEGKHVSPGSLTKDVPVIVMNGLSKVYFATGWRLGY 248 (398)
T ss_pred EEEECCCCCCCcCcCHHH-HHHHHHHHHHcCeEEEEhhhhhhhccCCcccCHHHcCcCCcEEEEecchhccCCccceEEE
Confidence 555555666788776555 999999999999999999999876 433221111111122233 7999976 7999999
Q ss_pred EEe--cHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeee
Q 011856 325 YGG--RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYI 400 (476)
Q Consensus 325 ~~~--~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~ 400 (476)
+++ ++++++.+..........+++.+.+++.++.++|+...+ .+..++++++.+++.+.|++ ++......+.
T Consensus 249 ~~~~~~~~~~~~l~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~l~~~~~~~~~~~~~l~~~L~~----~~~~~~~~p~ 324 (398)
T PRK08363 249 IYFVDPEGKLAEVREAIDKLARIRLCPNTPAQFAAIAGLTGPMDYLEEYMKKLKERRDYIYKRLNE----IPGISTTKPQ 324 (398)
T ss_pred EEEeCcHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhc----CCCCEecCCC
Confidence 987 666665544210111112356788888888888752111 23334455555555555543 3222222344
Q ss_pred ce-eEEEEEecCCCcCchhhcccchHHHHHH-HHHHHHCCeEeccCC------CcceEEeCCCcHHHHHHHHHHHHHHHH
Q 011856 401 SG-MFGFFFTEGPVYNFEDAKKSETTKFARF-YRGMLEEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEKVKM 472 (476)
Q Consensus 401 g~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~Gv~~~~~~------~~~~~~~~~~t~e~i~~~~~~l~~~~~ 472 (476)
|. ++++.+..... .+ ..++ .+.|.++||.+.++. ..++|+++..+++++++++++|.++++
T Consensus 325 g~~~~~~~l~~~~~--------~~---~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~~~ 393 (398)
T PRK08363 325 GAFYIFPRIEEGPW--------KD---DKEFVLDVLHEAHVLFVHGSGFGEYGAGHFRLVFLPPVEILEEAMDRFEEFMR 393 (398)
T ss_pred eEEEEEEEeccCCC--------CC---HHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHHH
Confidence 44 44445532100 00 1234 455678999998863 235788888899999999999999887
Q ss_pred Hh
Q 011856 473 RF 474 (476)
Q Consensus 473 ~~ 474 (476)
+.
T Consensus 394 ~~ 395 (398)
T PRK08363 394 ER 395 (398)
T ss_pred Hh
Confidence 64
No 146
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.94 E-value=3.7e-24 Score=211.72 Aligned_cols=324 Identities=15% Similarity=0.139 Sum_probs=208.0
Q ss_pred cCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHH
Q 011856 96 IDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRL 174 (476)
Q Consensus 96 ~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~~~~~~~~~~la~~l~~~~~-~~e~v~~~~sGseA~~~al~~ 174 (476)
.++.+++||..|. +++| .++.+.+++.+.+.... .|+.....+|.+.+++++. ++++|++++|+++++..+++.
T Consensus 17 ~~~~~~i~l~~~~--~~~~-~p~~~~~a~~~~~~~~~--~y~~~~~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~~~~~~ 91 (356)
T PRK08056 17 ISPDQLLDFSANI--NPLG-MPVSLKRAIIDNLDCAE--RYPDVEYRHLHQALARHHQVPASWILAGNGETESIFAVVSG 91 (356)
T ss_pred CChhhEEEecccc--CCCC-CCHHHHHHHHHHHHhcc--cCcCccHHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHHH
Confidence 3466789988764 5666 68889999988776533 3344446788888888876 678999999999999998884
Q ss_pred HHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcc
Q 011856 175 ARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEP 254 (476)
Q Consensus 175 ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep 254 (476)
+.+ +++++..++|..+. ..+...|..+...+.....++ . .| +++++.+. +++++|++..
T Consensus 92 ---l~~-g~viv~~P~y~~~~-~~~~~~g~~~~~v~~~~~~~~-----------~-~~-~~~~~~~~---~~~k~v~l~~ 150 (356)
T PRK08056 92 ---LKP-RRAMIVTPGFAEYR-RALQQVGCEIRRYSLREADGW-----------Q-LT-DAILEALT---PDLDCLFLCT 150 (356)
T ss_pred ---hCC-CCEEEeCCCcHHHH-HHHHHcCCeEEEEecccccCC-----------C-cc-HHHHHhcc---CCCCEEEEeC
Confidence 334 35777888876543 233444544333222111111 0 02 34444443 2566666655
Q ss_pred cCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccchhhccCCCCc-h--hhhhhhcC-CCCcEEEEEe-c
Q 011856 255 VVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPD-L--TTLGKIIG-GGLPVGAYGG-R 328 (476)
Q Consensus 255 ~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pD-i--~t~sK~lg-~G~~iG~~~~-~ 328 (476)
.+|++|.+.+ ++.+++|.++|++||+++|+||+|.+| ..+.... ..+...+. + .+|||.++ .|+|+||+++ +
T Consensus 151 p~NPTG~~~~-~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~-~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~ 228 (356)
T PRK08056 151 PNNPTGLLPE-RQLLQAIAERCKSLNIALILDEAFIDFIPDETGFI-PQLADNPHLWVLRSLTKFYAIPGLRLGYLVNSD 228 (356)
T ss_pred CcCCCCCCCC-HHHHHHHHHHHHhcCCEEEEecchhccCCcchHHH-HHhccCCCEEEEEechhhccCcchhheeeecCC
Confidence 5666787654 555999999999999999999999888 4332111 11111122 2 37999999 8999999987 4
Q ss_pred HHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEE
Q 011856 329 RDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFF 407 (476)
Q Consensus 329 ~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~ 407 (476)
+++++.+... ...++.+.+++.++.++++.-.. .+..++++++.+++.+.|+++ +.....+..|.++++.
T Consensus 229 ~~~~~~l~~~-----~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~----~~~~~~~~~~~~~~~~ 299 (356)
T PRK08056 229 DAAVARMRRQ-----QMPWSINAFAALAGEVILQDRAYQQATWQWLAEEGARFYQALCAL----PLLTVWPGRANYLFLR 299 (356)
T ss_pred HHHHHHHHHh-----CCCCchhHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcC----CCcEEcCCCCcEEEEE
Confidence 6777777531 23456677777777776631000 233444555555555555442 2122234567777776
Q ss_pred EecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCC------cceEEeCCCcHHHHHHHHHHHHHHHH
Q 011856 408 FTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF------EAGFTSLAHSSDDIQHTITAAEKVKM 472 (476)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~------~~~~~~~~~t~e~i~~~~~~l~~~~~ 472 (476)
+..+ ..++++.|+++||.+.++.. +++|+++. ++++.+.++++|+++++
T Consensus 300 ~~~~---------------~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis~~-~~~~~~~l~~~l~~~~~ 354 (356)
T PRK08056 300 CERP---------------DIDLQRALLTQRILIRSCANYPGLDSRYYRVAIR-SAAENERLLAALRNVLT 354 (356)
T ss_pred cCCC---------------hHHHHHHHHHCCeEEEECCCCCCCCCCEEEEEEc-CHHHHHHHHHHHHHHHc
Confidence 6311 24688899999999987641 35677755 67899999999988764
No 147
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.94 E-value=4.6e-24 Score=214.65 Aligned_cols=341 Identities=13% Similarity=0.088 Sum_probs=213.1
Q ss_pred cCCCEEEecccChhhccC--CC--CcHHHHHHHHHHHHhcC--CCC---CCCHHHHHHHHHHHhhCC---CCCeEEEeCC
Q 011856 96 IDGNEYIDYVGSWGPAII--GH--ADDQVLAALGETMKKGT--SFG---APCLLENVLAEMVISAVP---SIEMVRFVNS 163 (476)
Q Consensus 96 ~dG~~~iD~~~~~~~~~l--G~--~~p~v~~a~~~~l~~~~--~~~---~~~~~~~~la~~l~~~~~---~~e~v~~~~s 163 (476)
.+|+.+|+|..| .+. ++ .++.+.+++.+.+++.. .|+ +..++++++++++.+.++ .+++|++++|
T Consensus 29 ~~~~~~i~l~~G---~p~~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~I~it~G 105 (409)
T PLN00143 29 DDHRLAISFGFG---DPSCFECFRTTNIAEDAIVEAVRSAKFNSYAPTGGILPARRAIADYLSNDLPYQLSPDDVYLTLG 105 (409)
T ss_pred CCCCceeeCCCC---CCCCCCCCCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHhhEEEecC
Confidence 456778888877 443 32 68889999998887642 232 234677777777766542 5789999999
Q ss_pred HHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcC
Q 011856 164 GTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN 243 (476)
Q Consensus 164 GseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~ 243 (476)
+++++..+++.. ..+++.|++.+++|.++.. .....|..+...+.....+. . -|+++|+++++..
T Consensus 106 ~~~al~~~~~~l--~~~gd~v~v~~P~y~~~~~-~~~~~g~~~~~~~~~~~~~~---------~---~d~~~l~~~~~~~ 170 (409)
T PLN00143 106 CKHAAEIIIKVL--ARPEANILLPRPGFPDVET-YAIFHHLEIRHFDLLPEKGW---------E---VDLDAVEAIADEN 170 (409)
T ss_pred hHHHHHHHHHHH--cCCCCEEEEcCCCCcCHHH-HHHHcCCEEEEEeccCCCCC---------c---CCHHHHHHhcccC
Confidence 999999999842 3456788888999877533 33334443322211100111 0 1789998887642
Q ss_pred CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccc-hhhccCCCCch---hhhhhhcC-
Q 011856 244 KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGG-AQEYFGVTPDL---TTLGKIIG- 317 (476)
Q Consensus 244 ~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~-~~~~~g~~pDi---~t~sK~lg- 317 (476)
..++++++| +|++|.+.+.++ +++|.++|++|+++||+||+|.+| ..+..+ ....+.-...+ .+|||.++
T Consensus 171 --~~~~~~~nP-~NPTG~~~s~~~-~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~ 246 (409)
T PLN00143 171 --TIAMVIINP-GNPCGSVYSYEH-LNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFASIVPVITLGSISKRWMI 246 (409)
T ss_pred --CEEEEEECC-CCCCCCccCHHH-HHHHHHHHHHcCCeEEEEccccccccCCCCCcchhhhcccCcEEEEccchhhcCC
Confidence 455666676 566788776555 999999999999999999999888 433211 11112212222 37999977
Q ss_pred CCCcEEEEEec--HHHH------HhhcCCCCccccCCCCCcHHHHHHHHHHHHHh-cC--CCHHHHHHHHHHHHHHHHHH
Q 011856 318 GGLPVGAYGGR--RDIM------EMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRL-KE--PGTYEYLNKITGELTQGIID 386 (476)
Q Consensus 318 ~G~~iG~~~~~--~~i~------~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~-~~--~~~~~~~~~~~~~l~~~L~~ 386 (476)
+|+|+||++++ +.++ +.+.. ......+ .+.+++.++.++|+.- .. ++..++++++.+.+.+.|.+
T Consensus 247 pGlRvG~~v~~~p~~~~~~~~~~~~~~~---~~~~~~~-~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~ 322 (409)
T PLN00143 247 PGWGLGWLVTCDPSGLLQICEIADSIKK---ALNPAPF-PPTFIQAAIPEILEKTTEDFFSKTINILRAALAFCYDKLKE 322 (409)
T ss_pred CccceEEEEeeCchhhhhhHHHHHHHHH---HHhccCC-CCchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 79999999883 3332 22221 1111222 3677888887777521 00 23344455555555555543
Q ss_pred HhhhcCCce--EeeeeceeEEEEEecCCCcCchhhcccchHHHHHHH-HHHHHCCeEeccCC----CcceEEeCCCcHHH
Q 011856 387 AGKKAGHAI--CGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFY-RGMLEEGVYFAPSQ----FEAGFTSLAHSSDD 459 (476)
Q Consensus 387 ~~~~~~~~~--~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~Gv~~~~~~----~~~~~~~~~~t~e~ 459 (476)
.+... ..+..|.++|+.+..... ++.....++. ..+.++||.+.|+. .+++|+++..++++
T Consensus 323 ----~~~~~~~~~p~gg~f~w~~l~~~~~--------~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRi~~~~~~~~ 390 (409)
T PLN00143 323 ----IPCIMCPQKAEGAFFALVKLNLLLL--------EDIEDDMEFCLKLAKEESLIILPGVTVGLKNWLRITFAVEQSS 390 (409)
T ss_pred ----CCCCCCCCCCCeeEEEEEecchhhc--------CCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEEcCCHHH
Confidence 22211 123457788888742100 0000123444 45578899999874 34678998889999
Q ss_pred HHHHHHHHHHHHHHh
Q 011856 460 IQHTITAAEKVKMRF 474 (476)
Q Consensus 460 i~~~~~~l~~~~~~~ 474 (476)
+++++++|.+++++.
T Consensus 391 l~~al~rl~~~l~~~ 405 (409)
T PLN00143 391 LEDGLGRLKSFCGRH 405 (409)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999988653
No 148
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.94 E-value=8.5e-24 Score=212.09 Aligned_cols=331 Identities=15% Similarity=0.109 Sum_probs=208.3
Q ss_pred CCEEEecccChhhccCCCCcHHHHHHHHHHHHhcCCCCCC-----CHHHHHHHHHHHhhCC---CCC-eEEEeCCHHHHH
Q 011856 98 GNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAP-----CLLENVLAEMVISAVP---SIE-MVRFVNSGTEAC 168 (476)
Q Consensus 98 G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~~~~-----~~~~~~la~~l~~~~~---~~e-~v~~~~sGseA~ 168 (476)
|..++||..+ ++.+..++.+.+++.+.+.......|+ .+++.++++++.+.++ .++ .+++|+|+++++
T Consensus 34 g~~~i~l~~g---~p~~~~p~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~~~al 110 (394)
T PRK05942 34 GLDLIDLGMG---NPDGAAPQPVIEAAIAALADPQNHGYPPFEGTASFRQAITDWYHRRYGVELDPDSEALPLLGSKEGL 110 (394)
T ss_pred CCCeEEcCCC---CCCCCCCHHHHHHHHHHHhCCCCccCCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEEccChHHHH
Confidence 4456888776 555545677888887777543222222 3667777777766543 455 588999999999
Q ss_pred HHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeE
Q 011856 169 MGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIA 248 (476)
Q Consensus 169 ~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a 248 (476)
..++... ...++.|++.+++|.+....+ ...|..+...+.....+. .-|++++++.+.. +++
T Consensus 111 ~~~~~~~--~~~gd~Vlv~~P~y~~~~~~~-~~~g~~~~~v~~~~~~~~------------~~d~~~l~~~~~~---~~k 172 (394)
T PRK05942 111 THLALAY--VNPGDVVLVPSPAYPAHFRGP-LIAGAQIYPIILKPENDW------------LIDLSSIPEEVAQ---QAK 172 (394)
T ss_pred HHHHHHh--CCCCCEEEEcCCCCcchHHHH-HHcCCEEEEeecCCccCC------------ccCHHHHHHhccc---cce
Confidence 9998842 455678999999998754433 333433322211100110 0178889888753 566
Q ss_pred EEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccccc-chh-hc---cCCCCchhhhhhhcC-CCCc
Q 011856 249 AIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG-GAQ-EY---FGVTPDLTTLGKIIG-GGLP 321 (476)
Q Consensus 249 ~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~-~~~-~~---~g~~pDi~t~sK~lg-~G~~ 321 (476)
+|++...+|++|.+.+.++ +++|.++|++||+++|+||+|..| ..+.. ... +. .+....+.+|||.++ +|+|
T Consensus 173 ~i~l~~P~NPtG~~~s~~~-~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlR 251 (394)
T PRK05942 173 ILYFNYPSNPTTATAPREF-FEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWR 251 (394)
T ss_pred EEEEcCCCCCCCCcCCHHH-HHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecchhccCChhhh
Confidence 7776644667887776555 999999999999999999999877 43321 111 11 111223347999998 8999
Q ss_pred EEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHhhhcCCceEeee
Q 011856 322 VGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGY 399 (476)
Q Consensus 322 iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~ 399 (476)
+||+++++++++.+... .....++.+.+++.++.++|+..++ ++..++++++.+++.+.|++ .++....+.
T Consensus 252 iG~i~~~~~l~~~l~~~---~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~----~~~~~~~~~ 324 (394)
T PRK05942 252 VGFVVGNRHIIQGLRTL---KTNLDYGIFSALQKAAETALQLPDSYLQQVQERYRTRRDFLIQGLGE----LGWNIPPTK 324 (394)
T ss_pred eeeeecCHHHHHHHHHH---HhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH----CCCeecCCC
Confidence 99999999999888732 1222455677788888887763221 33445555555555555544 333222233
Q ss_pred eceeEEEEEecCCCcCchhhcccchHHHHHHHHH-HHHCCeEeccCC------CcceEEeCCCcHHHHHHHHHHHHHH
Q 011856 400 ISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRG-MLEEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEKV 470 (476)
Q Consensus 400 ~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~Gv~~~~~~------~~~~~~~~~~t~e~i~~~~~~l~~~ 470 (476)
.|.++++.+.... + ..++... +.++||.+.++. .+++|+++..+.+.+.+++++|.++
T Consensus 325 ~~~f~~~~~~~~~----------~---~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~ 389 (394)
T PRK05942 325 ATMYLWVPCPVGM----------G---STDFALNVLQKTGVVVTPGNAFGEGGEGYVRISLIADCDRLGEALDRLKQA 389 (394)
T ss_pred eeeEEEEECCCCC----------C---HHHHHHHHHHHCCEEEeCChhhCcCCCCeEEEEecCCHHHHHHHHHHHHHh
Confidence 4557777764210 1 1345544 457899998753 2467888876677777777776653
No 149
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.93 E-value=3e-24 Score=222.02 Aligned_cols=341 Identities=11% Similarity=0.077 Sum_probs=208.4
Q ss_pred cCCCEEEecccChhhccCCC-CcHHHHHHHHHHHHhcCCCCC---CCHHHHHHHHHHHhhCC---CCCeEEEeCCHHHHH
Q 011856 96 IDGNEYIDYVGSWGPAIIGH-ADDQVLAALGETMKKGTSFGA---PCLLENVLAEMVISAVP---SIEMVRFVNSGTEAC 168 (476)
Q Consensus 96 ~dG~~~iD~~~~~~~~~lG~-~~p~v~~a~~~~l~~~~~~~~---~~~~~~~la~~l~~~~~---~~e~v~~~~sGseA~ 168 (476)
..|+.+|+|..|.. +++|. .++++.+++.+.+.....|.. ..++++++++++..... .+++|++++|+++++
T Consensus 143 ~~g~~~i~l~~G~p-~~~~~~~p~~~~~~~~~~~~~~~~Y~~~~G~~~lReaia~~~~~~~~~~~~~~~I~it~G~~eal 221 (517)
T PRK13355 143 AAGTHILKLNIGNP-APFGFRTPDEVVYDMAQQLTDTEGYSDSKGLFSARKAIMQYAQLKGLPNVDVDDIYTGNGVSELI 221 (517)
T ss_pred HcCCCeEEecCcCC-CcCCCCCCHHHHHHHHHHhhcCCCCCCCcChHHHHHHHHHHHHhcCCCCCChhHEEEeCcHHHHH
Confidence 35778899888622 34565 478899999888765433322 23455566666544332 578999999999999
Q ss_pred HHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeE
Q 011856 169 MGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIA 248 (476)
Q Consensus 169 ~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a 248 (476)
..+++.. ...++.|++.+++|..+...+ ...|..+...+.....++ .-|++++++.++. +++
T Consensus 222 ~~~~~~l--~~~Gd~Vli~~P~y~~y~~~~-~~~g~~~v~~~~~~~~~~------------~~d~~~l~~~~~~---~~k 283 (517)
T PRK13355 222 NLSMSAL--LDDGDEVLIPSPDYPLWTACV-NLAGGTAVHYRCDEQSEW------------YPDIDDIRSKITS---RTK 283 (517)
T ss_pred HHHHHHh--CCCCCEEEEcCCCCcCHHHHH-HHCCCEEEEeecCcccCC------------CCCHHHHHHhcCc---Cce
Confidence 9999842 345678999999998765433 334443322211111110 0178999988863 455
Q ss_pred EE-EEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccchhhccCCCCch-----hhhhhhcC-CCC
Q 011856 249 AI-ILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDL-----TTLGKIIG-GGL 320 (476)
Q Consensus 249 ~v-i~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pDi-----~t~sK~lg-~G~ 320 (476)
+| +++| +|++|.+.+. +.+++|.++|++||++||+||+|..| ..+.... ......+|+ -+|||.++ +||
T Consensus 284 ~i~i~nP-~NPTG~v~~~-~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~-s~~~~~~~~~vi~~~S~SK~~~~~G~ 360 (517)
T PRK13355 284 AIVIINP-NNPTGALYPR-EVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHT-SIASLAPDLFCVTFSGLSKSHMIAGY 360 (517)
T ss_pred EEEEECC-CCCCCcCcCH-HHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcc-cHHHhCCCCeEEEEecchhhccCccc
Confidence 55 5555 5677887764 44999999999999999999999887 4442111 111123443 26899997 799
Q ss_pred cEEEEEe--cHHH----HHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC-CCHHH---HHHHHHHHHHHHHHHHhhh
Q 011856 321 PVGAYGG--RRDI----MEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYE---YLNKITGELTQGIIDAGKK 390 (476)
Q Consensus 321 ~iG~~~~--~~~i----~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~---~~~~~~~~l~~~L~~~~~~ 390 (476)
|+||+++ ++++ ++.+.. .....++.|.+++.++.++|+.... +++.+ ++.++.+++.+.|++
T Consensus 361 RiG~~i~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~q~a~~~aL~~~~~~~~~~~~~~~~~~~r~~l~~~L~~---- 432 (517)
T PRK13355 361 RIGWMILSGNKRIAKDYIEGLNM----LANMRLCSNVPAQSIVQTALGGHQSVKDYLVPGGRVYEQRELVYNALNA---- 432 (517)
T ss_pred ceEEEEeeCchhhHHHHHHHHHH----HhcCcCCcChHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHhc----
Confidence 9999984 4543 333321 1112345678888888888742111 12222 222333444444443
Q ss_pred cCCceEeeeecee-EEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCC------CcceEEeCCCcHHHHHHH
Q 011856 391 AGHAICGGYISGM-FGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ------FEAGFTSLAHSSDDIQHT 463 (476)
Q Consensus 391 ~~~~~~v~~~g~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~------~~~~~~~~~~t~e~i~~~ 463 (476)
.+........|.| +++.+..... . ..+ ....+.+.|.++||.+.|+. .+++|+++..++++++++
T Consensus 433 ~~g~~~~~p~g~fy~~~~l~~~~~-~-----~~~--~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~Ris~~~~~~~l~~a 504 (517)
T PRK13355 433 IPGISAVKPKAAFYIFPKIDVKKF-N-----IHD--DEQFALDLLHDKKVLIVQGTGFNWDKPDHFRVVYLPRLEDLEDA 504 (517)
T ss_pred CCCcccCCCCeeeEEEeecCcccC-C-----CCC--HHHHHHHHHHhCCEEEeCcchhCCCCcCEEEEEeCCCHHHHHHH
Confidence 3222223444554 4445532100 0 001 11233456778899998863 346789988999999999
Q ss_pred HHHHHHHHHHh
Q 011856 464 ITAAEKVKMRF 474 (476)
Q Consensus 464 ~~~l~~~~~~~ 474 (476)
+++|.++++..
T Consensus 505 ~~rl~~~~~~~ 515 (517)
T PRK13355 505 MDRLADFFSYY 515 (517)
T ss_pred HHHHHHHHHHh
Confidence 99999998753
No 150
>PRK05839 hypothetical protein; Provisional
Probab=99.93 E-value=4.6e-24 Score=212.32 Aligned_cols=326 Identities=11% Similarity=0.031 Sum_probs=206.2
Q ss_pred CCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcCCCCC---CCHHHHHHHHHHHhhCC---CCCeEEEeCCHHHHHHH
Q 011856 97 DGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGA---PCLLENVLAEMVISAVP---SIEMVRFVNSGTEACMG 170 (476)
Q Consensus 97 dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~~~---~~~~~~~la~~l~~~~~---~~e~v~~~~sGseA~~~ 170 (476)
+|+.++||..|. ..++ .++.+.+++.+.......|.. ..++++++++++.+.++ .+++|++|+|+++|+..
T Consensus 22 ~~~~~i~l~~~~--p~~~-~~~~~~~a~~~~~~~~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~~~I~it~G~~~al~~ 98 (374)
T PRK05839 22 KEYKGLDLTIGE--PQFE-TPKFIQDALKNNAHLLNKYPKSAGEESLREAQRGFFKRRFKIELKENELIPTFGTREVLFN 98 (374)
T ss_pred CCCCeEEcCCCC--CCCC-CCHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHH
Confidence 378899998875 3445 468888888776544333322 24677788888877654 57899999999999988
Q ss_pred HHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEE
Q 011856 171 VLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAI 250 (476)
Q Consensus 171 al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~v 250 (476)
+++....-.+++.|++..++|..+...+ ...|..+...+.....++ .. |++.. .++ ++++|
T Consensus 99 ~~~~~~~~~~gd~vlv~~P~y~~~~~~~-~~~g~~v~~v~~~~~~~~---------~~---d~~~~--~~~----~~k~v 159 (374)
T PRK05839 99 FPQFVLFDKQNPTIAYPNPFYQIYEGAA-IASRAKVLLMPLTKENDF---------TP---SLNEK--ELQ----EVDLV 159 (374)
T ss_pred HHHHHhcCCCCCEEEECCCCchhhHHHH-HhcCCEEEEeecccccCC---------cC---Ccchh--hhc----cccEE
Confidence 8774211134567888888887754443 444544433222111111 00 22221 222 35566
Q ss_pred EEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccchh-hcc---C--CCCchh---hhhhhcC-CC
Q 011856 251 ILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQ-EYF---G--VTPDLT---TLGKIIG-GG 319 (476)
Q Consensus 251 i~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~-~~~---g--~~pDi~---t~sK~lg-~G 319 (476)
++...+|++|.+.+.++ +++|.++|++||++||+||+|..| ..+..... ... + -.++++ +|||.++ +|
T Consensus 160 ~i~nP~NPTG~~~s~~~-l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~G 238 (374)
T PRK05839 160 ILNSPNNPTGRTLSLEE-LIEWVKLALKHDFILINDECYSEIYENTPPPSLLEASILVGNESFKNVLVINSISKRSSAPG 238 (374)
T ss_pred EEeCCCCCcCcccCHHH-HHHHHHHHHHcCCEEEeccchhhcccCCCCCCHhhhhcccCccccCcEEEEeccccccCCcc
Confidence 66555666788776555 999999999999999999999877 32221111 100 0 012333 7999987 79
Q ss_pred CcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCceEeee
Q 011856 320 LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGY 399 (476)
Q Consensus 320 ~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~ 399 (476)
+|+||+++++++++.+... .....++.+.+.+.++.+++. ++++.+++++..+.-++.+.+.. +.. .+.
T Consensus 239 lRiG~ii~~~~~~~~~~~~---~~~~~~~~~~~~q~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~l---~~~--~p~ 307 (374)
T PRK05839 239 LRSGFIAGDASILKKYKAY---RTYLGCASPLPLQKAAAVAWL---DDEHAEFFRNIYAKNLKLAREIL---GIT--IPP 307 (374)
T ss_pred ceeEEEecCHHHHHHHHHH---HhhcCCCCChHHHHHHHHHhc---cchHHHHHHHHHHHHHHHHHHhc---CCC--CCC
Confidence 9999999999998887631 122234567777777766653 23444333333333333333322 221 445
Q ss_pred eceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHH-CCeEeccCC--------CcceEEeCCCcHHHHHHHHHHHHHH
Q 011856 400 ISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLE-EGVYFAPSQ--------FEAGFTSLAHSSDDIQHTITAAEKV 470 (476)
Q Consensus 400 ~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~~--------~~~~~~~~~~t~e~i~~~~~~l~~~ 470 (476)
.|.++++.+.+ ..++++.|++ +||.+.|+. .+++|+++..+++++++++++|.++
T Consensus 308 gg~fi~~~~~~----------------~~~~~~~l~~~~gi~v~pg~~f~~~~~~~~~iRis~~~~~~~~~~~l~~l~~~ 371 (374)
T PRK05839 308 ATFYVWLPVDN----------------DEEFTKKLYQNEGIKVLPGSFLGRNGIGKGYVRIALVYDTPKLEKALEIIKTY 371 (374)
T ss_pred eeEEEEEeCCC----------------hHHHHHHHHHHCCEEEeCchhhCCCCCCCCeEEEEecCCHHHHHHHHHHHHHH
Confidence 67788887631 1467778875 999999852 2467898888999999999999988
Q ss_pred HH
Q 011856 471 KM 472 (476)
Q Consensus 471 ~~ 472 (476)
++
T Consensus 372 l~ 373 (374)
T PRK05839 372 LE 373 (374)
T ss_pred hh
Confidence 74
No 151
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.93 E-value=9e-24 Score=212.49 Aligned_cols=341 Identities=14% Similarity=0.071 Sum_probs=211.4
Q ss_pred CCEEEecccChhhc--cCCCCcHHHHHHHHHHHHhcCCCCC-C----CHHHHHHHHHHHhhCC--CCCeEEEeCCHHHHH
Q 011856 98 GNEYIDYVGSWGPA--IIGHADDQVLAALGETMKKGTSFGA-P----CLLENVLAEMVISAVP--SIEMVRFVNSGTEAC 168 (476)
Q Consensus 98 G~~~iD~~~~~~~~--~lG~~~p~v~~a~~~~l~~~~~~~~-~----~~~~~~la~~l~~~~~--~~e~v~~~~sGseA~ 168 (476)
|+.+++|..|...+ .++ .++.+.+++.+.+......+| + .++++++++.+..... ..++|++++|+++++
T Consensus 30 ~~~~i~l~~g~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~~~~~~~~i~~t~G~~~al 108 (401)
T TIGR01264 30 EKPMIKLSIGDPTVFGNLP-TDPEVMQAMKDSLDSGKYNGYAPTVGALSAREAIASYYHNPDGPIEADDVVLCSGCSHAI 108 (401)
T ss_pred CCCeeecCCCCCCCcCCCC-CCHHHHHHHHHHHhccCCCCCCCCCCCHHHHHHHHHHHhhcCCCCCHHHEEECcChHHHH
Confidence 34667777763211 122 578899999887775322222 2 3455566666543211 468999999999999
Q ss_pred HHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeE
Q 011856 169 MGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIA 248 (476)
Q Consensus 169 ~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a 248 (476)
..+++.. ..+++.|++.+++|..+. ..+...|..+...+....... --|++.+++.+++ +++
T Consensus 109 ~~~~~~l--~~~gd~v~i~~P~y~~~~-~~~~~~g~~v~~~~~~~~~~~------------~~d~~~l~~~~~~---~~~ 170 (401)
T TIGR01264 109 EMCIAAL--ANAGQNILVPRPGFPLYE-TLAESMGIEVKLYNLLPDKSW------------EIDLKQLESLIDE---KTA 170 (401)
T ss_pred HHHHHHh--CCCCCEEEEeCCCChhHH-HHHHHcCCEEEEeecCCccCC------------CCCHHHHHHHhcc---Cce
Confidence 9999843 235677888888887643 333444443332221111000 0178999888764 345
Q ss_pred EEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccchhhccCCCCc--h---hhhhhhcC-CCCc
Q 011856 249 AIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPD--L---TTLGKIIG-GGLP 321 (476)
Q Consensus 249 ~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pD--i---~t~sK~lg-~G~~ 321 (476)
+|++...+|++|.+.+.++ +++|.++|+++|+++|+||+|.+| ..+..+. ....+.++ + -+|||.++ +|+|
T Consensus 171 ~v~~~~p~NPtG~~~~~~~-~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~-~~~~~~~~~~vi~~~SfSK~~~~~GlR 248 (401)
T TIGR01264 171 ALIVNNPSNPCGSVFSRQH-LEEILAVAERQCLPIIADEIYGDMVFSGATFE-PLASLSSTVPILSCGGLAKRWLVPGWR 248 (401)
T ss_pred EEEEcCCCCCCCCCCCHHH-HHHHHHHHHHCCCEEEEEhhhhhhccCCcccc-cHHHcCCCCcEEEEccCcccCCCccce
Confidence 5666555667787766555 999999999999999999999988 5442111 11122232 3 37999977 7999
Q ss_pred EEEEEecH------HHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHHHHHHhhhcC
Q 011856 322 VGAYGGRR------DIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAG 392 (476)
Q Consensus 322 iG~~~~~~------~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~ 392 (476)
+||+++++ ++++.+.. .. ...++.+++++.++.+.|+...+ ++..++++++.+.+.+.|+++ .+
T Consensus 249 iG~iv~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~q~a~~~~l~~~~~~~l~~~~~~~~~~r~~l~~~L~~~---~~ 321 (401)
T TIGR01264 249 LGWIIIHDRRGILRDIRDGLVK---LS-QRILGPCTIVQGALPSILLRTPQEYFDGTLSVLESNAMLCYGALAAV---PG 321 (401)
T ss_pred EEEEEecCcchhHHHHHHHHHH---Hh-hccCCCCcHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhC---CC
Confidence 99998863 34444431 11 12345678888888888753111 223344444445555555442 02
Q ss_pred CceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHH-HCCeEeccCC----CcceEEeCCCcHHHHHHHHHHH
Q 011856 393 HAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ----FEAGFTSLAHSSDDIQHTITAA 467 (476)
Q Consensus 393 ~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~----~~~~~~~~~~t~e~i~~~~~~l 467 (476)
+....+..|.++++.+..... ++.....++.+.|+ ++||++.|+. .+.+|+++...++++++++++|
T Consensus 322 ~~~~~p~~g~f~~~~~~~~~~--------~~~~~~~~~~~~l~~~~gI~v~pg~~f~~~~~iRis~~~~~~~l~~~l~rl 393 (401)
T TIGR01264 322 LRPVMPSGAMYMMVGIEMEHF--------PEFKNDVEFTERLVAEQSVFCLPGSCFEYPGFFRVVLTVPVVMMEEACSRI 393 (401)
T ss_pred CcccCCCeeeEEEEEeccccc--------CCCCCHHHHHHHHHHhCCEEEeCchhcCCCCeEEEEEcCCHHHHHHHHHHH
Confidence 222335678888888743100 00001246677775 7899998864 2467888888899999999999
Q ss_pred HHHHHHh
Q 011856 468 EKVKMRF 474 (476)
Q Consensus 468 ~~~~~~~ 474 (476)
.++++++
T Consensus 394 ~~~~~~~ 400 (401)
T TIGR01264 394 QEFCERH 400 (401)
T ss_pred HHHHhcc
Confidence 9988764
No 152
>PRK06855 aminotransferase; Validated
Probab=99.93 E-value=6.7e-24 Score=214.79 Aligned_cols=333 Identities=16% Similarity=0.147 Sum_probs=198.2
Q ss_pred CcHHHHHHHHHHHHhcCCCCC-----CCHHHHHHHHHHHhhCC---CCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEE
Q 011856 116 ADDQVLAALGETMKKGTSFGA-----PCLLENVLAEMVISAVP---SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKF 187 (476)
Q Consensus 116 ~~p~v~~a~~~~l~~~~~~~~-----~~~~~~~la~~l~~~~~---~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~ 187 (476)
.++.+.+++.+.+.+...++| ..++++.+++++.+..+ ++++|++|+|+++|+..++. ....++.|++.
T Consensus 49 ~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~I~it~G~~~al~~~~~---l~~~Gd~Vlv~ 125 (433)
T PRK06855 49 IPDWMKEIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQITPDDIIFFNGLGDAIAKIYG---LLRREARVIGP 125 (433)
T ss_pred CCHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCHhHEEEcCcHHHHHHHHHH---hcCCCCeEEEe
Confidence 577888888887754322222 34677788888876543 57899999999999988875 34567889999
Q ss_pred eCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHH
Q 011856 188 EGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPD 267 (476)
Q Consensus 188 ~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~ 267 (476)
+++|+++........+..+..++.....++ .-|+++|++.++.+++..++++++| +|++|.+.+.++
T Consensus 126 ~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~------------~~d~~~l~~~~~~~~~~~~i~l~~P-~NPTG~~~s~~~ 192 (433)
T PRK06855 126 SPAYSTHSSAEAAHAGYPPVTYRLDPENNW------------YPDLDDLENKVKYNPSIAGILLINP-DNPTGAVYPKEI 192 (433)
T ss_pred CCCCchHHHHHHHhcCCeEEEEecccccCC------------CCCHHHHHHHHhcCCCceEEEEECC-CCCCCcCCCHHH
Confidence 999998543222222332222111111111 0178999999975322234445555 566777776555
Q ss_pred HHHHHHHHHHHhCCEEEEeccccCc-cccccchhhccCCCCc-----hhhhhhhcC-CCCcEEEEEec-----H---HHH
Q 011856 268 FLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPD-----LTTLGKIIG-GGLPVGAYGGR-----R---DIM 332 (476)
Q Consensus 268 ~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pD-----i~t~sK~lg-~G~~iG~~~~~-----~---~i~ 332 (476)
+++|.++|++||++||+||+|..| ..+.... ....+.+| +.+|||.++ +|||+||++++ + .++
T Consensus 193 -~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~-sl~~~~~~~~~I~~~S~SK~~~~pGlRiG~ii~p~~~~~~~~~~~~ 270 (433)
T PRK06855 193 -LREIVDIAREYDLFIICDEIYNNIVYNGKKTV-PLSEVIGDVPGIALKGISKELPWPGSRCGWIEVYNADKDEVFKKYI 270 (433)
T ss_pred -HHHHHHHHHHcCCEEEEeccccccccCCCCCC-CHHHHcCcCCeEEEecCccccCCCcceEEEEEEeCCchhhHHHHHH
Confidence 999999999999999999999888 4442111 11111122 237999998 89999999872 2 233
Q ss_pred HhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHH----HHHHHHHHHHHHHHHHHhhhc-CCceEeeeeceeEEEE
Q 011856 333 EMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTY----EYLNKITGELTQGIIDAGKKA-GHAICGGYISGMFGFF 407 (476)
Q Consensus 333 ~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~----~~~~~~~~~l~~~L~~~~~~~-~~~~~v~~~g~~~~i~ 407 (476)
+.+.. .. ....+.+.+++.++.++|+.-.-+++. +.++++.+.+.+.|+ ++ ++....+..|.++|+.
T Consensus 271 ~~~~~---~~-~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L~----~~~~~~~~~p~gg~~~w~~ 342 (433)
T PRK06855 271 NSILN---AK-MIEVCSTTLPQMAIPRIMSHPEYKNYLKERNKRYEKRSNIAYEKLK----DVPGLKVNRTNGAFYMTVV 342 (433)
T ss_pred HHHHH---hh-ccccCCChHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHh----cCCCeeccCCCeeEEEeec
Confidence 33321 11 123356778888887777421001222 233333333333333 23 2222233456778887
Q ss_pred EecCCCcC-----c-----hhh---cccc-hHHHHHHHH-HHHHCCeEeccCCC-----cceEEeCCC-cHHHHHHHHHH
Q 011856 408 FTEGPVYN-----F-----EDA---KKSE-TTKFARFYR-GMLEEGVYFAPSQF-----EAGFTSLAH-SSDDIQHTITA 466 (476)
Q Consensus 408 ~~~~~~~~-----~-----~~~---~~~~-~~~~~~~~~-~l~~~Gv~~~~~~~-----~~~~~~~~~-t~e~i~~~~~~ 466 (476)
+....... + ... ...+ .....++.. .+.++||.+.|+.. +.+|+++.. +++++++++++
T Consensus 343 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~~~~~~~Rls~~~~~~~~i~~~~~~ 422 (433)
T PRK06855 343 FEDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFCTELNGFRVTLLERDEEKFEWIYQT 422 (433)
T ss_pred cccccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCCCCCCceEEEECCCcHHHHHHHHHH
Confidence 75321000 0 000 0000 001234554 45678999998731 247888774 99999999999
Q ss_pred HHHHHHHh
Q 011856 467 AEKVKMRF 474 (476)
Q Consensus 467 l~~~~~~~ 474 (476)
|.+++++.
T Consensus 423 l~~~~~~~ 430 (433)
T PRK06855 423 LAEKIEEY 430 (433)
T ss_pred HHHHHHHH
Confidence 99999864
No 153
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.93 E-value=1.1e-23 Score=210.76 Aligned_cols=332 Identities=13% Similarity=0.064 Sum_probs=214.8
Q ss_pred EEecccChhhccCCCCcHHHHHHHHHHHHhcCC--CC---CCCHHHHHHHHHHHhhCC---C-CCeEEEeCCHHHHHHHH
Q 011856 101 YIDYVGSWGPAIIGHADDQVLAALGETMKKGTS--FG---APCLLENVLAEMVISAVP---S-IEMVRFVNSGTEACMGV 171 (476)
Q Consensus 101 ~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~--~~---~~~~~~~~la~~l~~~~~---~-~e~v~~~~sGseA~~~a 171 (476)
++|+..|. ..+. .++.+.+|+.+.+..... |. +..+++.++++.+++.++ . .+++++++|+++++..+
T Consensus 29 ~~~l~~g~--~~~~-~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~~~ 105 (389)
T PRK05957 29 TISLGQGV--VSYP-PPPEAIEALNNFLANPENHKYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFMNA 105 (389)
T ss_pred eEEccCCC--CCCC-CCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHHHHH
Confidence 46666663 2233 578899999887764322 21 234777888898888765 2 56899999999999988
Q ss_pred HHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEE
Q 011856 172 LRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAII 251 (476)
Q Consensus 172 l~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi 251 (476)
++.. ..+++.|++.+++|.... ..+...|..+...+.....+ -|++++++.++. ++++|+
T Consensus 106 ~~~~--~~~gd~Vlv~~P~y~~~~-~~~~~~g~~~~~v~~~~~~~--------------~d~~~l~~~i~~---~~klv~ 165 (389)
T PRK05957 106 ILAI--TDPGDEIILNTPYYFNHE-MAITMAGCQPILVPTDDNYQ--------------LQPEAIEQAITP---KTRAIV 165 (389)
T ss_pred HHHh--cCCCCEEEEeCCCCcCHH-HHHHhcCCEEEEeecCCCCC--------------cCHHHHHHhcCc---CceEEE
Confidence 8742 345677888888876643 33333444332221111111 178999998863 466666
Q ss_pred EcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccccc-ch-hhccCCCCc---hhhhhhhcC-CCCcEEE
Q 011856 252 LEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG-GA-QEYFGVTPD---LTTLGKIIG-GGLPVGA 324 (476)
Q Consensus 252 ~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~-~~-~~~~g~~pD---i~t~sK~lg-~G~~iG~ 324 (476)
+...+|++|.+.+..+ +++|.++|++||++||+||+|.+| ..+.. .. ....+..+. +.+|||.+| .|+|+||
T Consensus 166 ~~~p~NPtG~~~~~~~-~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~ 244 (389)
T PRK05957 166 TISPNNPTGVVYPEAL-LRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFASWRIGY 244 (389)
T ss_pred EeCCCCCCCcCcCHHH-HHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhccCccceeEE
Confidence 6666777888887665 999999999999999999999877 43211 11 111122222 347999998 8999999
Q ss_pred EEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHhhhcCC-ceEeeeec
Q 011856 325 YGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGH-AICGGYIS 401 (476)
Q Consensus 325 ~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~v~~~g 401 (476)
+++++++++.+... ......+.+.+++.++..+|+.-.. ++..++++++.+.+.+.|+++. +. ....+..|
T Consensus 245 ~~~~~~~~~~~~~~---~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~~---~~~~~~~~~gg 318 (389)
T PRK05957 245 MVIPIHLLEAIKKI---QDTILICPPVVSQYAALGALQVGKSYCQQHLPEIAQVRQILLKSLGQLQ---DRCTLHPANGA 318 (389)
T ss_pred EecCHHHHHHHHHH---HhhcccCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhcC---CCccccCCCee
Confidence 99999999888632 1222334566777777777742110 2234445555555555555431 11 11123346
Q ss_pred eeEEEEEecCCCcCchhhcccchHHHHHHHHHHH-HCCeEeccCC------CcceEEeCC-CcHHHHHHHHHHHHHHHHH
Q 011856 402 GMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ------FEAGFTSLA-HSSDDIQHTITAAEKVKMR 473 (476)
Q Consensus 402 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~------~~~~~~~~~-~t~e~i~~~~~~l~~~~~~ 473 (476)
.++++.+..+ . ...++.+.|+ ++||.+.|+. ...+|+++. .+++++++++++|.+.+++
T Consensus 319 ~~~~~~~~~~-~------------~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~l~~~~~~l~~~~~~ 385 (389)
T PRK05957 319 FYCFLKVNTD-L------------NDFELVKQLIREYRVAVIPGTTFGMKNGCYLRIAYGALQKATAKEGIERLVQGLKT 385 (389)
T ss_pred EEEEEeCCCC-C------------ChHHHHHHHHHHCCEEEccchhhCCCCCCEEEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 6677776321 1 1256778876 5899999873 135788875 5899999999999999887
Q ss_pred hh
Q 011856 474 FL 475 (476)
Q Consensus 474 ~~ 475 (476)
++
T Consensus 386 ~~ 387 (389)
T PRK05957 386 IV 387 (389)
T ss_pred hh
Confidence 65
No 154
>PRK07683 aminotransferase A; Validated
Probab=99.93 E-value=1.5e-23 Score=209.62 Aligned_cols=334 Identities=15% Similarity=0.085 Sum_probs=211.4
Q ss_pred CEEEecccChhhccCCCCcHHHHHHHHHHHHhc-CCCC---CCCHHHHHHHHHHHhhCC---CCC-eEEEeCCHHHHHHH
Q 011856 99 NEYIDYVGSWGPAIIGHADDQVLAALGETMKKG-TSFG---APCLLENVLAEMVISAVP---SIE-MVRFVNSGTEACMG 170 (476)
Q Consensus 99 ~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~-~~~~---~~~~~~~~la~~l~~~~~---~~e-~v~~~~sGseA~~~ 170 (476)
..++||..+. +.-..++.+.+++.+.++.. ..|+ +..+++.++++++.+..+ +++ ++++++|+++|+..
T Consensus 28 ~~~i~l~~~~---p~~~~~~~~~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~~I~~t~G~~~al~~ 104 (387)
T PRK07683 28 DNLISLTIGQ---PDFPTPSHVKEAAKRAITENYTSYTHNAGLLELRKAACNFVKDKYDLHYSPESEIIVTIGASEAIDI 104 (387)
T ss_pred CCeEEecCCC---CCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHH
Confidence 3567777773 22124678999999988753 2222 235667777777765433 456 89999999999999
Q ss_pred HHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEE
Q 011856 171 VLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAI 250 (476)
Q Consensus 171 al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~v 250 (476)
+++.. ...++.|++..++|.++... ....|..+...+.. ..++. -|.+++++.++. +++++
T Consensus 105 ~~~~l--~~~gd~Vl~~~p~y~~~~~~-~~~~g~~~~~~~~~-~~~~~------------~~~~~l~~~~~~---~~~~i 165 (387)
T PRK07683 105 AFRTI--LEPGTEVILPAPIYPGYEPI-IRLCGAKPVFIDTR-STGFR------------LTAEALENAITE---KTRCV 165 (387)
T ss_pred HHHHh--CCCCCEEEEcCCCccchHHH-HHHcCCEEEEeecC-cccCC------------CCHHHHHHhcCc---CceEE
Confidence 98852 34567788888888875443 33444433322111 01110 167888888763 45566
Q ss_pred EEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccccc-chhhccCCCCch---hhhhhhcC-CCCcEEE
Q 011856 251 ILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG-GAQEYFGVTPDL---TTLGKIIG-GGLPVGA 324 (476)
Q Consensus 251 i~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~-~~~~~~g~~pDi---~t~sK~lg-~G~~iG~ 324 (476)
++..++|++|.+.+..+ +++|.++|+++|+++|+||+|..+ ..+.. ......+...++ .+|||.++ +|+|+||
T Consensus 166 ~i~~p~NPtG~~~s~~~-~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~pGlRiG~ 244 (387)
T PRK07683 166 VLPYPSNPTGVTLSKEE-LQDIADVLKDKNIFVLSDEIYSELVYEQPHTSIAHFPEMREKTIVINGLSKSHSMTGWRIGF 244 (387)
T ss_pred EEeCCCCCCCcCCCHHH-HHHHHHHHHHcCeEEEEecccccceeCCCcCChhhccCCcCCeEEEeeccccccCccceeEE
Confidence 66555667788776555 999999999999999999999877 43321 111221221222 37999999 8999999
Q ss_pred EEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeece
Q 011856 325 YGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISG 402 (476)
Q Consensus 325 ~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~ 402 (476)
+++++++++.+... ......+.+.+++.++.+.|+.-.. +..+++++++.+.+.+.|.+ .++....+..|.
T Consensus 245 i~~~~~l~~~~~~~---~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~ 317 (387)
T PRK07683 245 LFAPSYLAKHILKV---HQYNVTCASSISQYAALEALTAGKDDAKMMRHQYKKRRDYVYNRLIS----MGLDVEKPTGAF 317 (387)
T ss_pred EEcCHHHHHHHHHH---HHhccCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHH----cCCcccCCCeeE
Confidence 99999998887631 1222334567777777777752111 22344445555555555544 333222233455
Q ss_pred eEEEEEecCCCcCchhhcccchHHHHHHHHH-HHHCCeEeccCC------CcceEEeCCCcHHHHHHHHHHHHHHHHHh
Q 011856 403 MFGFFFTEGPVYNFEDAKKSETTKFARFYRG-MLEEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEKVKMRF 474 (476)
Q Consensus 403 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~Gv~~~~~~------~~~~~~~~~~t~e~i~~~~~~l~~~~~~~ 474 (476)
++++.+..... ...++... +.++||.+.|+. .+.+|+++..+++++.+++++|.+++++-
T Consensus 318 ~~~~~~~~~~~------------~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~Ri~~~~~~~~~~~al~~l~~~l~~~ 384 (387)
T PRK07683 318 YLFPSIGHFTM------------SSFDFALDLVEEAGLAVVPGSAFSEYGEGYVRLSYAYSIETLKEGLDRLEAFLQQK 384 (387)
T ss_pred EEEEecccCCC------------CHHHHHHHHHHhCCEEEcCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHhh
Confidence 55555532110 01345544 567899998863 24678988889999999999999988653
No 155
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=1.6e-23 Score=206.77 Aligned_cols=317 Identities=15% Similarity=0.126 Sum_probs=210.4
Q ss_pred EEecccChhhccCCCCcHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHHHhcc
Q 011856 101 YIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFT 179 (476)
Q Consensus 101 ~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~~~~~~~~~~la~~l~~~~~-~~e~v~~~~sGseA~~~al~~ar~~~ 179 (476)
.+|+..|. +.++ .++.+.+++.+.+.......|+.+...+|.+.++++++ .+++|++++|+++++..+++.. ..
T Consensus 24 ~~~l~~~~--~~~~-~p~~~~~a~~~~~~~~~~~~y~~~~~~~lr~~ia~~~~~~~~~i~it~G~~~~l~~~~~~l--~~ 98 (351)
T PRK14807 24 KYKMDANE--TPFE-LPEEVIKNIQEIVKSSQVNIYPDPTAEKLREELARYCSVVPTNIFVGNGSDEIIHLIMLAF--IN 98 (351)
T ss_pred eeEccCCC--CCCC-CCHHHHHHHHHHhhcCcccCCCCccHHHHHHHHHHHhCCCcccEEEecCHHHHHHHHHHHh--cC
Confidence 36666663 3333 57899999988776433233444445778888888876 5789999999999999988842 34
Q ss_pred CCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCC
Q 011856 180 GRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNS 259 (476)
Q Consensus 180 ~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~ 259 (476)
.++.|++.+++|..+ .......|..+...+.....+ -|++++++.++.. ++++|+++..+|++
T Consensus 99 ~gd~Vlv~~p~y~~~-~~~~~~~g~~~~~v~~~~~~~--------------~d~~~l~~~~~~~--~~k~v~l~~p~NPt 161 (351)
T PRK14807 99 KGDVVIYPHPSFAMY-SVYSKIAGAVEIPVKLKEDYT--------------YDVGSFIKVIEKY--QPKLVFLCNPNNPT 161 (351)
T ss_pred CCCEEEEeCCChHHH-HHHHHHcCCeEEEeecCCCCC--------------CCHHHHHHHhhcc--CCCEEEEeCCCCCC
Confidence 567899988888753 333444454433322111111 1789999988743 56666666667778
Q ss_pred CcccCCHHHHHHHHHHHHHhCCEEEEeccccCccccccchhhccCCCCchh---hhhhhcC-CCCcEEEEEecHHHHHhh
Q 011856 260 GFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLT---TLGKIIG-GGLPVGAYGGRRDIMEMV 335 (476)
Q Consensus 260 G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pDi~---t~sK~lg-~G~~iG~~~~~~~i~~~l 335 (476)
|.+.+ .+++.++|++++.++|+||+|.+|. +... ....+..++++ +|||.++ +|+|+||+++++++++.+
T Consensus 162 G~~~~----~~~l~~l~~~~~~~~ivDe~y~~~~-~~~~-~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~v~~~~~~~~~ 235 (351)
T PRK14807 162 GSVIE----REDIIKIIEKSRGIVVVDEAYFEFY-GNTI-VDVINEFENLIVLRTLSKAFGLAGLRVGYAVANENILKYL 235 (351)
T ss_pred CCCCC----HHHHHHHHHhCCCEEEEeCcchhhc-ccch-HHHhhhCCCEEEEecchHhcccchhceeeeecCHHHHHHH
Confidence 98888 7778888988889999999998772 1111 11111122333 7999999 899999999999999988
Q ss_pred cCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCcC
Q 011856 336 APAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYN 415 (476)
Q Consensus 336 ~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~ 415 (476)
.... ..++.+.+++.++.+.|+.-.-++..++++++.+.+.+.|+++ .++ ...++.|.++++.+.+
T Consensus 236 ~~~~-----~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~r~~l~~~l~~~---~g~-~~~~~~~~~~~i~~~~----- 301 (351)
T PRK14807 236 NLVK-----SPYNINSLSQVIALKVLRTGVLKERVNYILNERERLIKELSKI---PGI-KVYPSKTNFILVKFKD----- 301 (351)
T ss_pred HHcc-----CCCCcCHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhC---CCc-EECcCCccEEEEEcCC-----
Confidence 6321 1345678888888887763111334445555556666665432 122 2234567777776631
Q ss_pred chhhcccchHHHHHHHHHHHHCCeEeccCC-----CcceEEeCCCcHHHHHHHHHHHHHHH
Q 011856 416 FEDAKKSETTKFARFYRGMLEEGVYFAPSQ-----FEAGFTSLAHSSDDIQHTITAAEKVK 471 (476)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~-----~~~~~~~~~~t~e~i~~~~~~l~~~~ 471 (476)
...+.+.|+++||.+.+.. .+.+|+++. +.++.+.+++.|++++
T Consensus 302 -----------~~~~~~~l~~~gV~v~~~~~~~~~~~~iRis~~-~~~~~~~l~~~l~~~~ 350 (351)
T PRK14807 302 -----------ADYVYQGLLERGILVRDFSKVEGLEGALRITVS-SCEANDYLINGLKELL 350 (351)
T ss_pred -----------HHHHHHHHHHCCEEEEECCCCCCCCCeEEEEcC-CHHHHHHHHHHHHHhh
Confidence 2567888999999997653 245788876 5678899999888753
No 156
>PLN02656 tyrosine transaminase
Probab=99.93 E-value=4.1e-23 Score=207.87 Aligned_cols=340 Identities=16% Similarity=0.099 Sum_probs=213.2
Q ss_pred CCCEEEecccChhhccC----CCCcHHHHHHHHHHHHhcCCCCC-----CCHHHHHHHHHHHhhCC---CCCeEEEeCCH
Q 011856 97 DGNEYIDYVGSWGPAII----GHADDQVLAALGETMKKGTSFGA-----PCLLENVLAEMVISAVP---SIEMVRFVNSG 164 (476)
Q Consensus 97 dG~~~iD~~~~~~~~~l----G~~~p~v~~a~~~~l~~~~~~~~-----~~~~~~~la~~l~~~~~---~~e~v~~~~sG 164 (476)
.|+.+++|..| ++- ...++.+.+++.+.+......+| ..++++++++++....+ .+++|++++|+
T Consensus 29 ~~~~~i~l~~G---~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~ 105 (409)
T PLN02656 29 NGKRVISLGMG---DPTAYSCFHTTHVAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSRDLPYKLSLDDVFITSGC 105 (409)
T ss_pred cCCeeeecCCC---CCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCcccEEEeCCh
Confidence 56788888877 442 34688999999988876322222 23566677777765433 46899999999
Q ss_pred HHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCC
Q 011856 165 TEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK 244 (476)
Q Consensus 165 seA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~ 244 (476)
++|+..++... ...++.|++.+++|..+ .......|..+...+.....+. .-|++++++.++..
T Consensus 106 ~~al~~~~~~l--~~~gd~Vlv~~p~y~~~-~~~~~~~g~~~~~i~~~~~~~~------------~~d~~~l~~~~~~~- 169 (409)
T PLN02656 106 TQAIDVALSML--ARPGANILLPRPGFPIY-ELCAAFRHLEVRYVDLLPEKGW------------EVDLDAVEALADQN- 169 (409)
T ss_pred HHHHHHHHHHH--hCCCCeEEEeCCCCCcH-HHHHHHcCCEEEEEeCCCcCCC------------CCCHHHHHHHhccC-
Confidence 99999999852 34567788888888653 3333334443332222101111 01789998888642
Q ss_pred CCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccc-hhhccCCCCc---hhhhhhhcC-C
Q 011856 245 GEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGG-AQEYFGVTPD---LTTLGKIIG-G 318 (476)
Q Consensus 245 ~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~-~~~~~g~~pD---i~t~sK~lg-~ 318 (476)
...++++.| +|++|.+.+.++ +++|.++|++||++||+||+|.+| ..+..+ ....++-... +-+|||.++ +
T Consensus 170 -~~~v~l~~P-~NPtG~~~s~~~-~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~p 246 (409)
T PLN02656 170 -TVALVIINP-GNPCGNVYSYQH-LKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIVP 246 (409)
T ss_pred -ceEEEEECC-CCCCCCCCCHHH-HHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhcccCcEEEEcccchhccCc
Confidence 345555565 556777765444 999999999999999999999888 444221 1111121112 237999977 7
Q ss_pred CCcEEEEEec--------HHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHHHHHH
Q 011856 319 GLPVGAYGGR--------RDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDA 387 (476)
Q Consensus 319 G~~iG~~~~~--------~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~ 387 (476)
|+|+||++++ +++++.+... .. ...+.+.+++.++.++|+...+ ++..++++++.+.+.+.|++
T Consensus 247 GlRiG~~i~~~~~~~~~~~~~~~~~~~~---~~-~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~- 321 (409)
T PLN02656 247 GWRLGWFVTTDPSGSFRDPKIVERIKKY---FD-ILGGPATFIQAAVPTILEQTDESFFKKTINILKQSSDICCDRIKE- 321 (409)
T ss_pred ceeEEEEEEeCcccccccHHHHHHHHHH---Hh-hhcCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhh-
Confidence 9999999983 5777776531 11 1224578888888888863111 22334444444455555544
Q ss_pred hhhcCCce-E-eeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCC----CcceEEeCCCcHHHHH
Q 011856 388 GKKAGHAI-C-GGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ----FEAGFTSLAHSSDDIQ 461 (476)
Q Consensus 388 ~~~~~~~~-~-v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~----~~~~~~~~~~t~e~i~ 461 (476)
++... . .+..|.++|+.+........ .+ ....+.+.+.++||.+.|+. .+.+|+++..++++++
T Consensus 322 ---~~~~~~~~~p~gg~~~w~~l~~~~~~~~-----~~--~~~~~~~~l~~~gV~v~pg~~fg~~~~iRi~~~~~~e~l~ 391 (409)
T PLN02656 322 ---IPCITCPHKPEGSMAVMVKLNLSLLEDI-----SD--DIDFCFKLAREESVIILPGTAVGLKNWLRITFAADPSSLE 391 (409)
T ss_pred ---CCCCcCCcCCCeEEEEEEecchhhcCCC-----CC--HHHHHHHHHHhCCEEEecchhcCCCCeEEEEeCCCHHHHH
Confidence 32211 1 23456777877642100000 00 11233466778999999874 2467898888999999
Q ss_pred HHHHHHHHHHHH
Q 011856 462 HTITAAEKVKMR 473 (476)
Q Consensus 462 ~~~~~l~~~~~~ 473 (476)
+++++|++++..
T Consensus 392 eal~rl~~~~~~ 403 (409)
T PLN02656 392 EALGRIKSFYLR 403 (409)
T ss_pred HHHHHHHHHHHH
Confidence 999999998864
No 157
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.93 E-value=1.4e-23 Score=207.30 Aligned_cols=319 Identities=15% Similarity=0.180 Sum_probs=206.3
Q ss_pred CEEEecccChhhccCCCCcHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHHHh
Q 011856 99 NEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARA 177 (476)
Q Consensus 99 ~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~~~~~~~~~~la~~l~~~~~-~~e~v~~~~sGseA~~~al~~ar~ 177 (476)
..++||..+. +.++. ++.+.+++.+.+..... |+.....+|.+.++++++ ++++|++++|+++++..+++.
T Consensus 19 ~~~~~l~~~~--~~~~~-p~~~~~a~~~~~~~~~~--Y~~~~~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~~~~~~--- 90 (354)
T PRK06358 19 NMILDFSANI--NPLGV-PESLKQAITENLDKLVE--YPDPDYLELRKRIASFEQLDLENVILGNGATELIFNIVKV--- 90 (354)
T ss_pred cceEEecCCC--CCCCC-CHHHHHHHHHHHHhhhc--CCCccHHHHHHHHHHHhCCChhhEEECCCHHHHHHHHHHH---
Confidence 3468887764 45553 78999999887765333 344445678888888776 789999999999999999884
Q ss_pred ccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEE-EEcccC
Q 011856 178 FTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAI-ILEPVV 256 (476)
Q Consensus 178 ~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~v-i~ep~~ 256 (476)
+ .++.|++.+++|+.+...+ ...|..+...+.....++ .. | +++.+.+.. +++++ +++| +
T Consensus 91 ~-~~~~v~i~~P~y~~~~~~~-~~~g~~~~~~~~~~~~~~-----------~~-d-~~~~~~~~~---~~~~v~~~~P-~ 151 (354)
T PRK06358 91 T-KPKKVLILAPTFAEYERAL-KAFDAEIEYAELTEETNF-----------AA-N-EIVLEEIKE---EIDLVFLCNP-N 151 (354)
T ss_pred h-CCCcEEEecCChHHHHHHH-HHcCCeeEEEeCccccCC-----------Cc-c-HHHHHhhcc---CCCEEEEeCC-C
Confidence 3 3367888899998754333 334443322211100010 00 4 344444432 34544 5566 5
Q ss_pred CCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccccc-chhhccCCCCchh---hhhhhcC-CCCcEEEEEe-cH
Q 011856 257 GNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG-GAQEYFGVTPDLT---TLGKIIG-GGLPVGAYGG-RR 329 (476)
Q Consensus 257 ~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~-~~~~~~g~~pDi~---t~sK~lg-~G~~iG~~~~-~~ 329 (476)
|++|.+.+.++ +++|.++|++||+++|+||+|..| ..+.. ......+..++++ +|||.++ +|+|+||+++ ++
T Consensus 152 NPtG~~~~~~~-~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~~~ 230 (354)
T PRK06358 152 NPTGQLISKEE-MKKILDKCEKRNIYLIIDEAFMDFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSNK 230 (354)
T ss_pred CCCCCccCHHH-HHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhccCCCCEEEEEechhhccCcchhheeeecCCH
Confidence 66777765555 999999999999999999999988 44321 1111222223333 7999999 9999999987 46
Q ss_pred HHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEE
Q 011856 330 DIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFF 408 (476)
Q Consensus 330 ~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~ 408 (476)
++++.+.... ..++.+.+++.++.++|+.-.. .+..+.++++.+.+.+.|++ ++.....++.|.++++.+
T Consensus 231 ~~~~~~~~~~-----~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~----~~~~~~~~~~g~f~~~~~ 301 (354)
T PRK06358 231 NLAEKLLQMR-----EPWSINTFADLAGQTLLDDKEYIKKTIQWIKEEKDFLYNGLSE----FKGIKVYKPSVNFIFFKL 301 (354)
T ss_pred HHHHHHHHhC-----CCCcchHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhc----CCCcEEcCCcceEEEEEc
Confidence 7877776321 2466788888888888742111 22334445555555555543 322222345677877766
Q ss_pred ecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCC------cceEEeCCCcHHHHHHHHHHHHHHH
Q 011856 409 TEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF------EAGFTSLAHSSDDIQHTITAAEKVK 471 (476)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~------~~~~~~~~~t~e~i~~~~~~l~~~~ 471 (476)
.+ . .++.+.|+++||.+.++.. +.+|++ ..++++.++++++|++++
T Consensus 302 ~~-------------~---~~~~~~l~~~gI~v~~~~~f~~~~~~~iRls-~~~~~~~~~l~~~l~~~~ 353 (354)
T PRK06358 302 EK-------------P---IDLRKELLKKGILIRSCSNYRGLDENYYRVA-VKSREDNKKLLKALEVIL 353 (354)
T ss_pred Cc-------------h---HHHHHHHHHCCeEEEECCCCCCCCCCEEEEE-eCCHHHHHHHHHHHHHHh
Confidence 31 1 5788899999999998631 246776 447788999999998875
No 158
>PRK08912 hypothetical protein; Provisional
Probab=99.93 E-value=1.9e-23 Score=209.24 Aligned_cols=333 Identities=17% Similarity=0.166 Sum_probs=212.8
Q ss_pred EEEecccChhhccCCCCcHHHHHHHHHHHHhc-CCCCC---CCHHHHHHHHHHHhhCC---CCC-eEEEeCCHHHHHHHH
Q 011856 100 EYIDYVGSWGPAIIGHADDQVLAALGETMKKG-TSFGA---PCLLENVLAEMVISAVP---SIE-MVRFVNSGTEACMGV 171 (476)
Q Consensus 100 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~-~~~~~---~~~~~~~la~~l~~~~~---~~e-~v~~~~sGseA~~~a 171 (476)
..+||..|.. ..+ .++.+.+++.+.+... ..|.. ..++++.+++++.+.++ .++ +|++++|+++++..+
T Consensus 27 ~~i~l~~g~p--~~~-~p~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~ 103 (387)
T PRK08912 27 GAINLGQGFP--DDP-GPEDVRRAAADALLDGSNQYPPMMGLPELRQAVAAHYARFQGLDLDPETEVMVTSGATEALAAA 103 (387)
T ss_pred CeEEccCCCC--CCC-CCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcccEEEeCCcHHHHHHH
Confidence 4688888753 233 4688888888877543 22221 24667777777765443 466 899999999999988
Q ss_pred HHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCC-CCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEE
Q 011856 172 LRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPD-SPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAI 250 (476)
Q Consensus 172 l~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~v 250 (476)
+... ..+++.|++.+++|..+.. .+...|..+...+... ..+ -|++++++.+.. +++++
T Consensus 104 ~~~~--~~~gd~Vlv~~p~y~~~~~-~~~~~g~~~~~~~~~~~~~~--------------~~~~~l~~~~~~---~~~~v 163 (387)
T PRK08912 104 LLAL--VEPGDEVVLFQPLYDAYLP-LIRRAGGVPRLVRLEPPHWR--------------LPRAALAAAFSP---RTKAV 163 (387)
T ss_pred HHHh--cCCCCEEEEeCCCchhhHH-HHHHcCCEEEEEecCcccCc--------------CCHHHHHHHhCc---cceEE
Confidence 8842 3456778888888876543 3344444333222211 011 178899888863 45555
Q ss_pred EEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccc--hhhccCCCC-ch--hhhhhhcC-CCCcEE
Q 011856 251 ILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGG--AQEYFGVTP-DL--TTLGKIIG-GGLPVG 323 (476)
Q Consensus 251 i~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~--~~~~~g~~p-Di--~t~sK~lg-~G~~iG 323 (476)
++...+|++|.+.+.++ +++|.++|++||+++|+||+|..+ ..+... .....+... ++ .+|||.++ +|+|+|
T Consensus 164 ~l~~p~NPtG~~~s~~~-~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG 242 (387)
T PRK08912 164 LLNNPLNPAGKVFPREE-LALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGWKVG 242 (387)
T ss_pred EEeCCCCCcCcccCHHH-HHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhccCcCceeE
Confidence 55555667787776555 999999999999999999999877 433111 111112212 22 37999999 899999
Q ss_pred EEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeec
Q 011856 324 AYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYIS 401 (476)
Q Consensus 324 ~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g 401 (476)
|+++++++++.+.. ......++.++..+.++.++|....+ +++.++++++.+++.+.|++. ++.......|
T Consensus 243 ~~~~~~~~~~~l~~---~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~g~ 315 (387)
T PRK08912 243 FVCAAPPLLRVLAK---AHQFLTFTTPPNLQAAVAYGLGKPDDYFEGMRADLARSRDRLAAGLRRI----GFPVLPSQGT 315 (387)
T ss_pred EEecCHHHHHHHHH---HHhhccccCChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC----CCcccCCCcc
Confidence 99999999888763 11223456667777777776642111 234455566666666666543 3222222345
Q ss_pred eeEEEEEecCCCcCchhhcccchHHHHHHHHHHH-HCCeEeccCC--------CcceEEeCCCcHHHHHHHHHHHHHHHH
Q 011856 402 GMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ--------FEAGFTSLAHSSDDIQHTITAAEKVKM 472 (476)
Q Consensus 402 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~--------~~~~~~~~~~t~e~i~~~~~~l~~~~~ 472 (476)
.++++.+..... .....++++.|+ ++||++.|+. .+.+|+++...++++++++++|.+++.
T Consensus 316 ~~l~~~l~~~~~----------~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~iRl~~~~~~~~l~~~l~rl~~~l~ 385 (387)
T PRK08912 316 YFLTVDLAPLGL----------AEDDVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRFCFAKRDATLDEAVERLAAARR 385 (387)
T ss_pred eEEEecccccCC----------CCCHHHHHHHHHhcCCEEEecchhhCCCCCCCCEEEEEEeCCHHHHHHHHHHHHHHHh
Confidence 566777643110 011256777776 5799998863 246788888889999999999998875
Q ss_pred H
Q 011856 473 R 473 (476)
Q Consensus 473 ~ 473 (476)
+
T Consensus 386 ~ 386 (387)
T PRK08912 386 R 386 (387)
T ss_pred c
Confidence 3
No 159
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.93 E-value=1.6e-23 Score=210.19 Aligned_cols=330 Identities=13% Similarity=0.033 Sum_probs=210.4
Q ss_pred cCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcCCCC---CCCHHHHHHHHHHHhhCC-----CC-CeEEEeCCHHH
Q 011856 96 IDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFG---APCLLENVLAEMVISAVP-----SI-EMVRFVNSGTE 166 (476)
Q Consensus 96 ~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~~---~~~~~~~~la~~l~~~~~-----~~-e~v~~~~sGse 166 (476)
..|+.++||..|. ..++ .++.+.+++.+.+.....|. +..+++.++++++.+.++ +. ++|++|+|+++
T Consensus 25 ~~~~~~i~l~~~~--p~~~-~~~~~~~a~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~it~Ga~~ 101 (393)
T TIGR03538 25 PASKPPIALSIGE--PKHP-TPAFVLEALRENLHGLSTYPTTKGLPELRQAIARWLERRFDLPTGVDPERHVLPVNGTRE 101 (393)
T ss_pred hcCCCeEEecCCC--CCCC-CCHHHHHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHhhCCcccCCCCceEEECCCcHH
Confidence 3567778888774 2333 57889999988775433332 234667778887766532 34 47999999999
Q ss_pred HHHHHHHHHHhccCCc--eEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCC
Q 011856 167 ACMGVLRLARAFTGRE--RIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK 244 (476)
Q Consensus 167 A~~~al~~ar~~~~~~--~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~ 244 (476)
++..+++.. ...++ .|++.+++|.++.. .....|..+..++.....++. -|++++++.+.+
T Consensus 102 al~~~~~~l--~~~gd~~~vlv~~P~y~~~~~-~~~~~g~~~~~v~~~~~~~~~------------~d~~~l~~~~~~-- 164 (393)
T TIGR03538 102 ALFAFAQAV--INPGQAPLVVMPNPFYQIYEG-AALLAGAEPYFLNCTAENGFL------------PDFDAVPESVWR-- 164 (393)
T ss_pred HHHHHHHHH--cCCCCcceEEecCCCCcchHH-HHHhcCCeEEEeeccccCCCC------------CCHHHHHHHHhh--
Confidence 999999842 22333 37777888877543 334445443332221111110 178888887753
Q ss_pred CCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccc--cc-hh---hccCC--CCchh---hh
Q 011856 245 GEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAY--GG-AQ---EYFGV--TPDLT---TL 312 (476)
Q Consensus 245 ~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~--~~-~~---~~~g~--~pDi~---t~ 312 (476)
++++|++...+|++|.+.+.++ +++|.++|++||++||+||+|..+ ..+. .. .. ...+. .+.++ +|
T Consensus 165 -~~k~i~l~~p~NPtG~~~s~~~-~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~ 242 (393)
T TIGR03538 165 -RCQLLFVCSPGNPTGAVLSLDT-LKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSL 242 (393)
T ss_pred -cceEEEEeCCCCCcCcccCHHH-HHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecc
Confidence 4566655555667787776554 999999999999999999999877 4321 11 11 11111 12232 79
Q ss_pred hhhcC-CCCcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHhhh
Q 011856 313 GKIIG-GGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKK 390 (476)
Q Consensus 313 sK~lg-~G~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~ 390 (476)
||.++ +|+|+||+++++++++.+.. .....+++.+++.+.++.+++..-+. ....+.++++.+.+.+.|++.
T Consensus 243 SK~~~~~GlRvG~~i~~~~l~~~~~~---~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~--- 316 (393)
T TIGR03538 243 SKRSNLPGLRSGFVAGDAEILKAFLR---YRTYHGCAMPIPTQLASIAAWNDEQHVRENRALYREKFAAVLEILGQV--- 316 (393)
T ss_pred hhhcCCcccceEEEecCHHHHHHHHH---HHHhhccCcCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhh---
Confidence 99987 79999999999999887763 22223456678888887777631100 223334444555555555442
Q ss_pred cCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHH-HCCeEeccCC------------CcceEEeCCCcH
Q 011856 391 AGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ------------FEAGFTSLAHSS 457 (476)
Q Consensus 391 ~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~------------~~~~~~~~~~t~ 457 (476)
+....+..|.++++.+.. + ..++++.|+ ++||.+.|+. .+.+|+++..++
T Consensus 317 --~~~~~p~gg~f~~~~~~~------------~---~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~~~~~ 379 (393)
T TIGR03538 317 --LDLELPDAGFYLWPKVPG------------D---DEAFARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIALVAPL 379 (393)
T ss_pred --CcccCCCeeEEEEEECCC------------C---HHHHHHHHHHHCCEEEeCCccccccccCCCCCCCEEEEEecCCH
Confidence 112235567788887741 1 146777776 5799997764 135788888899
Q ss_pred HHHHHHHHHHHHH
Q 011856 458 DDIQHTITAAEKV 470 (476)
Q Consensus 458 e~i~~~~~~l~~~ 470 (476)
+++++++++|++.
T Consensus 380 ~~l~~~l~~l~~~ 392 (393)
T TIGR03538 380 EECVEAAERIRSF 392 (393)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999999864
No 160
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.93 E-value=2e-23 Score=209.84 Aligned_cols=343 Identities=10% Similarity=0.066 Sum_probs=213.8
Q ss_pred CEEEecccChhhccCCCCcHHHHHHHHHHHHhcC-CCC---CCCHHHHHHHHHHHhhCC---CCCeEEEeCCHHHHHHHH
Q 011856 99 NEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT-SFG---APCLLENVLAEMVISAVP---SIEMVRFVNSGTEACMGV 171 (476)
Q Consensus 99 ~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~-~~~---~~~~~~~~la~~l~~~~~---~~e~v~~~~sGseA~~~a 171 (476)
..++|+..+. ..++ .++.+.+++.+.+.+.. .|. +..++++++++++.+.++ ..++|++++|+++|+..+
T Consensus 33 ~~~i~l~~g~--p~~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~ 109 (402)
T PRK06107 33 RSIVDLTVGE--PDFD-TPDHIKQAAVAAIERGETKYTLVNGTPALRKAIIAKLERRNGLHYADNEITVGGGAKQAIFLA 109 (402)
T ss_pred CCEEEcCCCC--CCCC-CCHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHH
Confidence 3466777664 2223 47889999998887532 232 234778888888887654 468899999999999999
Q ss_pred HHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEE
Q 011856 172 LRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAII 251 (476)
Q Consensus 172 l~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi 251 (476)
++. ....++.|++.+++|.++... +...+..+...+.+...+. . -|++++++.++. ++++++
T Consensus 110 ~~~--~~~~gd~vl~~~p~y~~y~~~-~~~~~~~~~~v~~~~~~~~-----------~-~~~~~l~~~~~~---~~~~v~ 171 (402)
T PRK06107 110 LMA--TLEAGDEVIIPAPYWVSYPDM-VLANDGTPVIVACPEEQGF-----------K-LTPEALEAAITP---RTRWLI 171 (402)
T ss_pred HHH--hcCCCCEEEEecCCCcCHHHH-HHHcCCEEEEecCCcccCC-----------C-CCHHHHHhhcCc---CceEEE
Confidence 873 234567788888877765433 3333322222111111111 0 167889888763 455555
Q ss_pred EcccCCCCCcccCCHHHHHHHHHHHHHh-CCEEEEeccccCc-cccccc-hh-hc-cCCCCchh---hhhhhcC-CCCcE
Q 011856 252 LEPVVGNSGFIAPKPDFLNAIRRITKEN-GALLIFDEVMTGF-RLAYGG-AQ-EY-FGVTPDLT---TLGKIIG-GGLPV 322 (476)
Q Consensus 252 ~ep~~~~~G~i~~~~~~l~~l~~l~~~~-g~llI~DEv~~g~-r~g~~~-~~-~~-~g~~pDi~---t~sK~lg-~G~~i 322 (476)
+...+|++|.+.+.++ +++|.++|++| |+++|+||+|..+ ..+..+ .. .. .+....++ +|||.++ .|+|+
T Consensus 172 l~~p~NPtG~~~s~~~-~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRi 250 (402)
T PRK06107 172 LNAPSNPTGAVYSRAE-LRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRI 250 (402)
T ss_pred EECCCCCCCcCcCHHH-HHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEeccchhhcCcccce
Confidence 5444567787776555 99999999998 9999999999876 333211 11 11 11112333 6899998 89999
Q ss_pred EEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeee
Q 011856 323 GAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYI 400 (476)
Q Consensus 323 G~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~ 400 (476)
||+++++++++.+.. .....+++.+.+++.++..+|+.-.. .+..+.++++.+.+.+.|++. .++....+..
T Consensus 251 G~~~~~~~~~~~~~~---~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~---~g~~~~~p~g 324 (402)
T PRK06107 251 GYAAGPADLIAAINK---LQSQSSSCPSSISQAAAAAALNGDQSFVTESVAVYKQRRDYALALLNAI---PGLSCLVPDG 324 (402)
T ss_pred eeeecCHHHHHHHHH---HHHhcccCCChHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhcC---CCCcccCCCc
Confidence 999999999988863 22333567788888888887742110 222334444445555555432 0222222344
Q ss_pred ceeEEEEEecCCCcCchhhcccch---HHHHHHHHHH-HHCCeEeccCC----CcceEEeCCCcHHHHHHHHHHHHHHHH
Q 011856 401 SGMFGFFFTEGPVYNFEDAKKSET---TKFARFYRGM-LEEGVYFAPSQ----FEAGFTSLAHSSDDIQHTITAAEKVKM 472 (476)
Q Consensus 401 g~~~~i~~~~~~~~~~~~~~~~~~---~~~~~~~~~l-~~~Gv~~~~~~----~~~~~~~~~~t~e~i~~~~~~l~~~~~ 472 (476)
|.++|+.+..-. ....+.. ....++...+ .++||.+.|+. .+++|+++..+++++++++++|.+.++
T Consensus 325 g~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~Fg~~~~iRis~~~~~e~l~~~l~~l~~~l~ 399 (402)
T PRK06107 325 AFYLYVNCAGLI-----GKTTPEGKVLETDQDVVLYLLDSAGVAVVQGTAYGLSPYFRLSIATSLETLEEACARIERAVA 399 (402)
T ss_pred ceEEeeeccccc-----ccccccccCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeCCCHHHHHHHHHHHHHHHH
Confidence 666677662100 0000000 0123555554 57899999873 246889988999999999999999988
Q ss_pred Hh
Q 011856 473 RF 474 (476)
Q Consensus 473 ~~ 474 (476)
++
T Consensus 400 ~~ 401 (402)
T PRK06107 400 AL 401 (402)
T ss_pred hc
Confidence 75
No 161
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=9.7e-24 Score=210.22 Aligned_cols=319 Identities=16% Similarity=0.080 Sum_probs=209.1
Q ss_pred CCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHH
Q 011856 97 DGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLA 175 (476)
Q Consensus 97 dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~~~~~~~~~~la~~l~~~~~-~~e~v~~~~sGseA~~~al~~a 175 (476)
.+..+||+..|. ++++ .+|.+.+++.+. ... ..|+.....+|.+.+++++. .+++|++++|+++++..+++..
T Consensus 50 ~~~~~i~l~~n~--~p~~-~~~~v~~a~~~~-~~~--~~Yp~~~~~~lr~~ia~~~~~~~~~I~~t~Ga~~~i~~~~~~~ 123 (380)
T PLN03026 50 KPEDIVKLDANE--NPYG-PPPEVLEALGNM-KFP--YVYPDPESRRLRAALAEDSGLESENILVGCGADELIDLLMRCV 123 (380)
T ss_pred CccceEEccCCC--CCCC-CCHHHHHHHHhh-Hhh--ccCCCCCHHHHHHHHHHHhCcChhhEEEcCCHHHHHHHHHHHh
Confidence 356889988875 4555 577888887652 221 22344445678888888876 6789999999999999998842
Q ss_pred HhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEccc
Q 011856 176 RAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPV 255 (476)
Q Consensus 176 r~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~ 255 (476)
...++.|++.+++|..+ .......|..+...+...... .|+++|++.++.. ++++|+++.+
T Consensus 124 --~~~gd~Vlv~~P~y~~y-~~~~~~~g~~~~~v~~~~~~~--------------~d~~~l~~~~~~~--~~~~v~l~~P 184 (380)
T PLN03026 124 --LDPGDKIIDCPPTFGMY-VFDAAVNGAEVIKVPRTPDFS--------------LDVPRIVEAVETH--KPKLLFLTSP 184 (380)
T ss_pred --cCCCCEEEEcCCChHHH-HHHHHHcCCEEEEeecCCCCC--------------cCHHHHHHHHhcc--CCcEEEEeCC
Confidence 34557788888888543 233333444333222111011 1789999888432 5667776666
Q ss_pred CCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccchhhccCCCCchh---hhhhhcC-CCCcEEEEEecHH
Q 011856 256 VGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLT---TLGKIIG-GGLPVGAYGGRRD 330 (476)
Q Consensus 256 ~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pDi~---t~sK~lg-~G~~iG~~~~~~~ 330 (476)
+|++|.+.+ .+++.++++.. +++|+||+|..| ..+... ....-.++++ +|||.+| +|+|+||++++++
T Consensus 185 ~NPTG~~~~----~~~l~~l~~~~-~~vi~DeaY~~~~~~~~~~--~~~~~~~~viv~~SfSK~~glaGlRiGy~~~~~~ 257 (380)
T PLN03026 185 NNPDGSIIS----DDDLLKILELP-ILVVLDEAYIEFSTQESRM--KWVKKYDNLIVLRTFSKRAGLAGLRVGYGAFPLS 257 (380)
T ss_pred CCCCCCCCC----HHHHHHHHhcC-CEEEEECcchhhcCCcchH--HHHHhCCCEEEEecchHhhcCccccceeeecCHH
Confidence 778888888 66667777654 899999999887 433211 1111123332 7999999 8999999999999
Q ss_pred HHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEe
Q 011856 331 IMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFT 409 (476)
Q Consensus 331 i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~ 409 (476)
+++.+.... ..++.+.+++.++.++|+..+- ++..+.++++++++.+.|+++ +.....+..|.++++.+.
T Consensus 258 ~i~~l~~~~-----~~~~~~~~~q~aa~~aL~~~~~~~~~~~~~~~~r~~l~~~L~~~----~~~~~~p~~~~f~~~~~~ 328 (380)
T PLN03026 258 IIEYLWRAK-----QPYNVSVAAEVAACAALSNPKYLEDVKNALVEERERLFGLLKEV----PFLEPYPSDANFILCRVT 328 (380)
T ss_pred HHHHHHHhc-----CCCCCCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHC----CCCeECCCCCeEEEEECC
Confidence 998876321 2356788888888888852111 234445555555565555543 322223556778887764
Q ss_pred cCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCC----CcceEEeCCCcHHHHHHHHHHHHHH
Q 011856 410 EGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ----FEAGFTSLAHSSDDIQHTITAAEKV 470 (476)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~----~~~~~~~~~~t~e~i~~~~~~l~~~ 470 (476)
.. ....++.+.|+++||.++++. .+.+|+++. +++++++++++|+++
T Consensus 329 ~~-------------~~~~~~~~~l~~~gI~v~~~~~~~~~~~lRis~~-~~~~~~~l~~al~~~ 379 (380)
T PLN03026 329 SG-------------RDAKKLKEDLAKMGVMVRHYNSKELKGYIRVSVG-KPEHTDALMEALKQL 379 (380)
T ss_pred CC-------------CCHHHHHHHHHHCCeEEEECCCCCCCCEEEEecC-CHHHHHHHHHHHHHh
Confidence 21 012578889999999998763 245788876 677889999888753
No 162
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.93 E-value=1e-23 Score=208.12 Aligned_cols=314 Identities=17% Similarity=0.168 Sum_probs=207.9
Q ss_pred CEEEecccChhhccCCCCcHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHHHh
Q 011856 99 NEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARA 177 (476)
Q Consensus 99 ~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~~~~~~~~~~la~~l~~~~~-~~e~v~~~~sGseA~~~al~~ar~ 177 (476)
.++|||..+. +.++ .+|++++++.+++.....|+.+. ..++.+.+++++. ..+++++++|+++++..+++..
T Consensus 19 ~~~i~l~~~~--~~~~-~~~~~~~a~~~~~~~~~~y~~~~--~~~lr~~ia~~~~~~~~~i~~~~G~~~~l~~~~~~l-- 91 (346)
T TIGR01141 19 KEVIKLNSNE--NPFG-PPPKAKEALRAEADKLHRYPDPD--PAELKQALADYYGVDPEQILLGNGSDEIIELLIRAF-- 91 (346)
T ss_pred CceEEccCCC--CCCC-CCHHHHHHHHHhHHHhhcCCCCC--HHHHHHHHHHHhCcChHHEEEcCCHHHHHHHHHHHh--
Confidence 4799999873 3444 58899999998875443333222 3677788888775 5789999999999998888742
Q ss_pred ccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCC
Q 011856 178 FTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVG 257 (476)
Q Consensus 178 ~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~ 257 (476)
..+++.|++.+++|..+ .......|..+...+.... + ..|++++++.+. +++++|+++..++
T Consensus 92 ~~~gd~v~~~~p~y~~~-~~~~~~~g~~~~~~~~~~~-~-------------~~d~~~l~~~~~---~~~~~v~l~~p~N 153 (346)
T TIGR01141 92 LEPGDAVLVPPPTYSMY-EISAKIHGAEVVKVPLDED-G-------------QLDLEDILVAID---DKPKLVFLCSPNN 153 (346)
T ss_pred cCCCCEEEEcCCCHHHH-HHHHHHcCCeEEEeccCCC-C-------------CCCHHHHHHhcC---CCCCEEEEeCCCC
Confidence 24557788888877432 2223333443332211110 1 127899988764 2567777776677
Q ss_pred CCCcccCCHHHHHHHHHHHHHh--CCEEEEeccccCc-cccccchhhccCCCCchh---hhhhhcC-CCCcEEEEEecHH
Q 011856 258 NSGFIAPKPDFLNAIRRITKEN--GALLIFDEVMTGF-RLAYGGAQEYFGVTPDLT---TLGKIIG-GGLPVGAYGGRRD 330 (476)
Q Consensus 258 ~~G~i~~~~~~l~~l~~l~~~~--g~llI~DEv~~g~-r~g~~~~~~~~g~~pDi~---t~sK~lg-~G~~iG~~~~~~~ 330 (476)
++|.+.+ ++++.++|+.+ |+++|+||+|.++ ..+... ......++++ ++||.++ +|+|+||++++++
T Consensus 154 ptG~~~~----~~~~~~l~~~~~~~~~ii~D~~y~~~~~~~~~~--~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~ 227 (346)
T TIGR01141 154 PTGNLLS----RSDIEAVLERTPEDALVVVDEAYGEFSGEPSTL--PLLAEYPNLIVLRTLSKAFGLAGLRIGYAIANAE 227 (346)
T ss_pred CCCCCCC----HHHHHHHHHhCCCCcEEEEECchhhhcCCccHH--HHHhhCCCEEEEehhhHhhhchhhhceeeecCHH
Confidence 8899988 55566666655 9999999999877 322111 1122223433 7999997 6999999999999
Q ss_pred HHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEe
Q 011856 331 IMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFT 409 (476)
Q Consensus 331 i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~ 409 (476)
+++.+.+. ..+++.+++++.++.++++.... .+..++++++.+++++.|+++. ++ ...+..|.++++.+.
T Consensus 228 ~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~---g~-~~~~~~g~~~~~~~~ 298 (346)
T TIGR01141 228 IIDALNKV-----RAPFNLSRLAQAAAIAALRDDDFIEKTVEEINAERERLYDGLKKLP---GL-EVYPSDANFVLIRFP 298 (346)
T ss_pred HHHHHHhc-----cCCCCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhcC---CC-EECCCcCCEEEEecC
Confidence 99888642 12456788888888777753321 3344555556666666665431 22 223445778787763
Q ss_pred cCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCC-----CcceEEeCCCcHHHHHHHHHHHH
Q 011856 410 EGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ-----FEAGFTSLAHSSDDIQHTITAAE 468 (476)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~-----~~~~~~~~~~t~e~i~~~~~~l~ 468 (476)
. ...++.+.|.++||++.++. ...+|+++. +++++++++++|+
T Consensus 299 ~---------------~~~~~~~~L~~~gI~v~~g~~f~~~~~~iRls~~-~~~~i~~~~~~l~ 346 (346)
T TIGR01141 299 R---------------DADALFEALLEKGIIVRDLNSYPGLPNCLRITVG-TREENDRFLAALR 346 (346)
T ss_pred C---------------CHHHHHHHHHHCCeEEEeCCCcCCCCCeEEEecC-CHHHHHHHHHHhC
Confidence 2 12578889999999999874 245788865 8899999998763
No 163
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.93 E-value=2.9e-23 Score=209.71 Aligned_cols=341 Identities=15% Similarity=0.092 Sum_probs=209.4
Q ss_pred CCEEEecccChhhccCC-C-CcHHHHHHHHHHHHhcCCCCC-----CCHHHHHHHHHHHhhCC---CCCeEEEeCCHHHH
Q 011856 98 GNEYIDYVGSWGPAIIG-H-ADDQVLAALGETMKKGTSFGA-----PCLLENVLAEMVISAVP---SIEMVRFVNSGTEA 167 (476)
Q Consensus 98 G~~~iD~~~~~~~~~lG-~-~~p~v~~a~~~~l~~~~~~~~-----~~~~~~~la~~l~~~~~---~~e~v~~~~sGseA 167 (476)
|+.+|++..|-. ..++ . .++++.+++.+.+..+...+| ..+++..+++++.+..+ .+++|++++|+++|
T Consensus 51 ~~~~i~l~~G~P-~~~~~~~~~~~~~~a~~~al~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~v~it~G~~~a 129 (430)
T PLN00145 51 PRPVLPLGHGDP-SAFPCFRTAPEAEDAVAAALRSGKYNSYSTCVGLLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQA 129 (430)
T ss_pred CCCeeeCCCCCC-CCCCCCCCCHHHHHHHHHHHHcCcCCCCCCCccCHHHHHHHHHHHhhccCCCCChhhEEEeCCHHHH
Confidence 667888887722 1122 2 478899999998876432222 23566666666655433 46899999999999
Q ss_pred HHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCe
Q 011856 168 CMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEI 247 (476)
Q Consensus 168 ~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~ 247 (476)
+..+++.. ..+++.|++.+++|..+.. .....|..+...++....+. . -|+++++++++.+ ..
T Consensus 130 l~l~~~~l--~~~Gd~Vlv~~P~y~~y~~-~~~~~g~~~~~~~~~~~~~~---------~---~d~~~l~~~~~~~--~~ 192 (430)
T PLN00145 130 IEIIMSVL--AQPGANILLPRPGYPLYEA-RAVFSGLEVRHFDLLPERGW---------E---VDLEGVEALADEN--TV 192 (430)
T ss_pred HHHHHHHh--cCCCCEEEEcCCCCccHHH-HHHHcCCEEEEeeCCcccCC---------c---CCHHHHHHHhCcC--ce
Confidence 99999842 2456788888998887543 33334443332221111110 0 1789999888642 44
Q ss_pred EEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccc-hhhccCCCCchh---hhhhhcC-CCCc
Q 011856 248 AAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGG-AQEYFGVTPDLT---TLGKIIG-GGLP 321 (476)
Q Consensus 248 a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~-~~~~~g~~pDi~---t~sK~lg-~G~~ 321 (476)
++++++| +|++|.+.+.++ +++|.++|++||+++|+||+|.+| ..+..+ ....++-...++ +|||.++ +|||
T Consensus 193 ~i~i~~P-~NPtG~v~~~~~-l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pG~R 270 (430)
T PLN00145 193 AMVIINP-NNPCGSVYSYEH-LAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFGEVAPVLTLGSISKRWVVPGWR 270 (430)
T ss_pred EEEEeCC-CCCCCCCCCHHH-HHHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhcccCcEEEEeccccccCCCCee
Confidence 5555566 566787776555 999999999999999999999877 433211 111122122233 7999977 8999
Q ss_pred EEEEEe--cHHHHH------hhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHHHHHHhhh
Q 011856 322 VGAYGG--RRDIME------MVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKK 390 (476)
Q Consensus 322 iG~~~~--~~~i~~------~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~ 390 (476)
+||+++ ++.+++ .+.. . .....+.+.+.+.++..+|+.-.+ ++.++.++++.+.+.+.|++
T Consensus 271 lG~iv~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~---- 342 (430)
T PLN00145 271 LGWIATCDPNGILKETKVVDSIRN---Y-LNISTDPATFVQGAIPQIIANTKEEFFTKTLGLLKETADICYEKIKE---- 342 (430)
T ss_pred EEEEEEecchhhhhhhHHHHHHHH---H-hcccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhc----
Confidence 999986 344433 2221 1 112224567888888777763111 23344444445545454443
Q ss_pred cCCce-E-eeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHH-HCCeEeccCC----CcceEEeCCCcHHHHHHH
Q 011856 391 AGHAI-C-GGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ----FEAGFTSLAHSSDDIQHT 463 (476)
Q Consensus 391 ~~~~~-~-v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~----~~~~~~~~~~t~e~i~~~ 463 (476)
++... . .+..|.++++.+...... +.....+++..++ ++||++.|+. .+++|+++..++++++++
T Consensus 343 ~~g~~~~~~P~ga~y~~v~l~~~~~~--------~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~lRis~~~~~~~l~~a 414 (430)
T PLN00145 343 IKCITCPHKPEGSMFVMVKLDLSCLS--------GIKDDMDFCCKLAKEESVVVLPGSALGMKNWLRITFAIDPPSLEDG 414 (430)
T ss_pred CCCCCCCcCCCeeeEEEeccChhhcC--------CCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeCCCHHHHHHH
Confidence 32222 1 245666777766321000 0001245665554 6799999873 346789888899999999
Q ss_pred HHHHHHHHHHh
Q 011856 464 ITAAEKVKMRF 474 (476)
Q Consensus 464 ~~~l~~~~~~~ 474 (476)
+++|.+++.+.
T Consensus 415 l~rl~~~~~~~ 425 (430)
T PLN00145 415 LERLKSFCLRH 425 (430)
T ss_pred HHHHHHHHHHh
Confidence 99999998753
No 164
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.93 E-value=3.2e-23 Score=208.94 Aligned_cols=346 Identities=13% Similarity=0.041 Sum_probs=217.4
Q ss_pred EEEcCCCEEEecccChhhcc--CCCCcHHHHHHHHHHHHhc--CCCC---CCCHHHHHHHHHHHhhC---------CCCC
Q 011856 93 MWDIDGNEYIDYVGSWGPAI--IGHADDQVLAALGETMKKG--TSFG---APCLLENVLAEMVISAV---------PSIE 156 (476)
Q Consensus 93 ~~d~dG~~~iD~~~~~~~~~--lG~~~p~v~~a~~~~l~~~--~~~~---~~~~~~~~la~~l~~~~---------~~~e 156 (476)
+.+..|+.+|||..|..... + ..++.+.+++.+.+... ..|. +..++++.+++++.+.+ -+++
T Consensus 27 ~~~~~~~~~i~l~~g~p~~~~~~-~p~~~~~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~~ 105 (412)
T PTZ00433 27 KPSPSPKSIIKLSVGDPTLDGNL-LTPAIQTKALVEAVDSQECNGYPPTVGSPEAREAVATYWRNSFVHKESLKSTIKKD 105 (412)
T ss_pred ccCCCCCCeeecCCcCCCCcCCC-CCCHHHHHHHHHHhhcCCCCCCCCCCCcHHHHHHHHHHHHhhccccccccCCCChh
Confidence 44467888899998843210 1 25788999998887752 2232 12466677777776532 1468
Q ss_pred eEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHH
Q 011856 157 MVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSAL 236 (476)
Q Consensus 157 ~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l 236 (476)
++++|+|+++++..+++.. ...++.|++.+++|..+. ......|..+...+....... --|+++|
T Consensus 106 ~i~it~G~~~al~~~~~~~--~~~gd~vlv~~P~y~~~~-~~~~~~g~~~~~i~~~~~~~~------------~~d~~~l 170 (412)
T PTZ00433 106 NVVLCSGVSHAILMALTAL--CDEGDNILVPAPGFPHYE-TVCKAYGIEMRFYNCRPEKDW------------EADLDEI 170 (412)
T ss_pred hEEEeCChHHHHHHHHHHh--cCCCCEEEEccCCcccHH-HHHHHcCCEEEEEecCccccC------------cCCHHHH
Confidence 9999999999999999842 235677888888887743 334444443332221100000 0178899
Q ss_pred HHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccccc-chhhccCCC-Cch--hh
Q 011856 237 ENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG-GAQEYFGVT-PDL--TT 311 (476)
Q Consensus 237 e~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~-~~~~~~g~~-pDi--~t 311 (476)
++.++. ++++|++...+|++|.+.+.++ +++|.++|++||++||+||+|.+| ..+.. .....+.-. +-+ -+
T Consensus 171 ~~~~~~---~~~~i~~~~p~NPtG~~~s~~~-~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S 246 (412)
T PTZ00433 171 RRLVDD---RTKALIMTNPSNPCGSNFSRKH-VEDIIRLCEELRLPLISDEIYAGMVFNGATFTSVADFDTTVPRVILGG 246 (412)
T ss_pred HHHhcc---CceEEEEeCCCCCCCcccCHHH-HHHHHHHHHHcCCeEEEeccccccccCCCCccchhhccCCCceEEEcc
Confidence 888764 4555666555667787776555 999999999999999999999888 44321 111111111 112 27
Q ss_pred hhhhcC-CCCcEEEEEe------cHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHH----HHHHHHHHHH
Q 011856 312 LGKIIG-GGLPVGAYGG------RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTY----EYLNKITGEL 380 (476)
Q Consensus 312 ~sK~lg-~G~~iG~~~~------~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~----~~~~~~~~~l 380 (476)
|||.++ +|+|+||+++ .+++++.+... ....++.+++.+.++.++|+.- .+.+. ++++++.+.+
T Consensus 247 fSK~~~~pGlRlG~~i~~~p~~~~~~~~~~~~~~----~~~~~~~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~~~r~~l 321 (412)
T PTZ00433 247 TAKNLVVPGWRLGWLLLVDPHGNGGDFLDGMKRL----GMLVCGPCSVVQAALGEALLNT-PQEHLEQIVAKLEEGAMVL 321 (412)
T ss_pred chhhcCCCCeeEEEEEEeCCcccHHHHHHHHHHH----hhccCCCChHHHHHHHHHHhcC-cHHHHHHHHHHHHHHHHHH
Confidence 999997 8999999986 24577666521 1123567888888888877531 12333 3344444444
Q ss_pred HHHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHH-HCCeEeccCC----CcceEEeCCC
Q 011856 381 TQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ----FEAGFTSLAH 455 (476)
Q Consensus 381 ~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~----~~~~~~~~~~ 455 (476)
.+.|++. .++....+..|.++++.+...... +.....++++.|+ ++||.+.++. .+.+|+++..
T Consensus 322 ~~~L~~~---~~~~~~~p~gg~f~~~~l~~~~~~--------~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRis~~~ 390 (412)
T PTZ00433 322 YNHIGEC---IGLSPTMPRGSMFLMSRLDLEKFR--------DIKSDVEFYEKLLEEENVQVLPGEIFHMPGFTRLTISR 390 (412)
T ss_pred HHHHhcC---CCCcccCCCeeEEEEEEechhhcC--------CCCCHHHHHHHHHHhcCEEEeCccccCCCCeEEEEecC
Confidence 4444332 122222344577788777421100 0001256788887 5799999874 2467888888
Q ss_pred cHHHHHHHHHHHHHHHHHh
Q 011856 456 SSDDIQHTITAAEKVKMRF 474 (476)
Q Consensus 456 t~e~i~~~~~~l~~~~~~~ 474 (476)
.++++++++++|.++++..
T Consensus 391 ~~e~l~~al~~l~~~~~~~ 409 (412)
T PTZ00433 391 PVEVLREAVERIKAFCERH 409 (412)
T ss_pred CHHHHHHHHHHHHHHHHHh
Confidence 8999999999999988754
No 165
>PRK09105 putative aminotransferase; Provisional
Probab=99.93 E-value=1.3e-23 Score=208.51 Aligned_cols=317 Identities=17% Similarity=0.159 Sum_probs=202.4
Q ss_pred CEEEecccChhhccCCCCcHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHHHh
Q 011856 99 NEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARA 177 (476)
Q Consensus 99 ~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~~~~~~~~~~la~~l~~~~~-~~e~v~~~~sGseA~~~al~~ar~ 177 (476)
+.++++..|. ++++ .+|.+.+++.+.+.....| +.....+|.+.+++.++ .+++|++++|+++++..+++..
T Consensus 43 ~~~i~l~~~~--~~~~-~~~~~~~a~~~~~~~~~~Y--~~~~~~~Lr~aia~~~~v~~e~I~it~Gs~~ai~~~~~~l-- 115 (370)
T PRK09105 43 EGAVFLNANE--CPLG-PSPAARDAAARSAALSGRY--DLELEDDLRTLFAAQEGLPADHVMAYAGSSEPLNYAVLAF-- 115 (370)
T ss_pred CCcEEecCCC--CCCC-CCHHHHHHHHHHHHHhcCC--CCchHHHHHHHHHHHhCcChhhEEEcCChHHHHHHHHHHH--
Confidence 3456666553 3454 6889999998877653333 43346788888888876 6889999999999999999842
Q ss_pred ccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCC
Q 011856 178 FTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVG 257 (476)
Q Consensus 178 ~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~ 257 (476)
...++.|++.+++|..+.. .....|..+...+.. .+. ..|++++++.. ++++++++...+|
T Consensus 116 ~~~gd~Vli~~P~y~~~~~-~~~~~g~~~~~v~~~--~~~------------~~d~~~l~~~~----~~~~~v~l~nP~N 176 (370)
T PRK09105 116 TSPTAGLVTADPTYEAGWR-AADAQGAPVAKVPLR--ADG------------AHDVKAMLAAD----PNAGLIYICNPNN 176 (370)
T ss_pred cCCCCEEEEeCCChHHHHH-HHHHcCCeEEEecCC--CCC------------CCCHHHHHhcC----CCCCEEEEeCCCC
Confidence 3456778888888866533 344445443332211 110 01677776652 1344555444466
Q ss_pred CCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCccccccchhhccCCCCchh---hhhhhcC-CCCcEEEEEecHHHHH
Q 011856 258 NSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLT---TLGKIIG-GGLPVGAYGGRRDIME 333 (476)
Q Consensus 258 ~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pDi~---t~sK~lg-~G~~iG~~~~~~~i~~ 333 (476)
++|.+.+.++ +++|.+.|+ +|++||+||+|..|.... ...+..+..++++ +|||.+| .|+|+||+++++++++
T Consensus 177 PTG~~~~~~~-l~~l~~~~~-~~~~lIvDEaY~~f~~~~-s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~~~i~ 253 (370)
T PRK09105 177 PTGTVTPRAD-IEWLLANKP-AGSVLLVDEAYIHFSDAP-SVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAARPDLLA 253 (370)
T ss_pred CCCcCcCHHH-HHHHHHhCC-CCcEEEEECchHHhccCc-chHHHHhhCCCEEEEecccHhhcCCccceeeeecCHHHHH
Confidence 7888876444 777777654 599999999997662111 1112222234543 7999998 8999999999999998
Q ss_pred hhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCC
Q 011856 334 MVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGP 412 (476)
Q Consensus 334 ~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~ 412 (476)
.+.. . ..++.+.+++.++.++|+..+- ++..++++++.+++.+.|++ +++. ..+..|.|+.+.+..
T Consensus 254 ~l~~---~---~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~----~g~~-~~~~~~~f~~~~~~~-- 320 (370)
T PRK09105 254 KLAR---F---GHNPLPVPAAAAGLASLRDPKLVPQRRAENAAVREDTIAWLKK----KGYK-CTPSQANCFMVDVKR-- 320 (370)
T ss_pred HHHh---c---CCCCcCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHH----CCCC-cCCCCCcEEEEeCCC--
Confidence 8863 1 2345677777787777752110 23334455555555555554 3322 224566676655421
Q ss_pred CcCchhhcccchHHHHHHHHHHHHCCeEeccC---CCcceEEeCCCcHHHHHHHHHHHHHHH
Q 011856 413 VYNFEDAKKSETTKFARFYRGMLEEGVYFAPS---QFEAGFTSLAHSSDDIQHTITAAEKVK 471 (476)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~---~~~~~~~~~~~t~e~i~~~~~~l~~~~ 471 (476)
+ ..++.+.|+++||.+... ..+++|+++. +++++++++++|++++
T Consensus 321 ----------~---~~~l~~~L~~~gI~v~~~~~~~~~~~Ris~~-~~~~~~~l~~al~~~~ 368 (370)
T PRK09105 321 ----------P---AKAVADAMAKQGVFIGRSWPIWPNWVRVTVG-SEEEMAAFRSAFAKVM 368 (370)
T ss_pred ----------C---HHHHHHHHHHCCcEEecCCCCCCCeEEEEcC-CHHHHHHHHHHHHHHh
Confidence 1 257888999999998422 1346788866 6788999999998775
No 166
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.93 E-value=4.9e-24 Score=208.46 Aligned_cols=302 Identities=15% Similarity=0.095 Sum_probs=200.2
Q ss_pred CEEEecccChhhccCCCCcHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhc
Q 011856 99 NEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAF 178 (476)
Q Consensus 99 ~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~~~~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~ 178 (476)
.+++|+.+|. +++|...+.+.+ ..+.. ||... .+|.+.+++++ +.++|++++|+++++..++. .
T Consensus 20 ~~~i~l~~ne--~p~~~~~~~~~~---~~~~~-----yp~~~-~~Lr~~ia~~~-~~~~I~it~Gs~~al~~~~~---~- 83 (330)
T PRK05664 20 ADWLDLSTGI--APWPWPVPAIPA---DAWAR-----LPETD-DGLEAAARAYY-GAPQLLPVAGSQAAIQALPR---L- 83 (330)
T ss_pred HHheeecCCc--CCCCCCCcccCH---HHHHh-----CCCCh-HHHHHHHHHHh-CCCCEEECcCHHHHHHHHHH---c-
Confidence 3578888887 677766444432 22222 23322 57777777777 67899999999999988764 2
Q ss_pred cCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCC
Q 011856 179 TGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGN 258 (476)
Q Consensus 179 ~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~ 258 (476)
..++.|++.+++|.+....+ ...|. +++.+| ++++++.+++ ...+++++|+ |+
T Consensus 84 ~~gd~v~v~~P~y~~~~~~~-~~~g~-------------------~~~~v~---~~~~~~~~~~---~~~v~l~nP~-NP 136 (330)
T PRK05664 84 RAPGRVGVLSPCYAEHAHAW-RRAGH-------------------QVRELD---EAEVEAALDS---LDVLVVVNPN-NP 136 (330)
T ss_pred cCCCEEEEcCCChHHHHHHH-HHcCC-------------------eEEEec---hhhHhhhhcC---CCEEEEeCCc-CC
Confidence 45678999999998754332 22232 233333 3456666642 2346777775 56
Q ss_pred CCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccchhhccCCCCchh---hhhhhcC-CCCcEEEEEecHHHHH
Q 011856 259 SGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLT---TLGKIIG-GGLPVGAYGGRRDIME 333 (476)
Q Consensus 259 ~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pDi~---t~sK~lg-~G~~iG~~~~~~~i~~ 333 (476)
+|.+.+.++ +++|.++|+++|++||+||+|.++ ....... +.-.++++ ||||++| +|+|+||+++++++++
T Consensus 137 TG~~~s~~~-l~~l~~~~~~~~~~iI~DE~y~~~~~~~s~~~---~~~~~~vi~~~SfSK~~gl~GlRiG~~v~~~~l~~ 212 (330)
T PRK05664 137 TGRRFDPAR-LLAWHARLAARGGWLVVDEAFMDNTPQHSLAA---CAHRPGLIVLRSFGKFFGLAGARLGFVLAEPALLR 212 (330)
T ss_pred CCCccCHHH-HHHHHHHHHhcCCEEEEECCcccCCCcccccc---cccCCCEEEEeeccccccCCCcceEEEEeCHHHHH
Confidence 777776555 999999999999999999999877 3221111 11123333 7999999 8999999999999998
Q ss_pred hhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCC
Q 011856 334 MVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGP 412 (476)
Q Consensus 334 ~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~ 412 (476)
.+... ..+++.+.+++.++.++|+.... +..+++++++.+++.+.|++. ++. ...+.+.++++.+.
T Consensus 213 ~~~~~-----~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~----~~~-~~~~~~~f~~~~~~--- 279 (330)
T PRK05664 213 ALAEL-----LGPWTVSGPTRWLAQAALADTPWQRRQRERLLAASQRLAALLRRH----GLT-PAGGCALFQWVRTE--- 279 (330)
T ss_pred HHHHh-----cCCCCCCHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHC----CCc-ccCCcceEEEEecC---
Confidence 88632 22456678888888888863211 334555555666666666553 321 11222355555431
Q ss_pred CcCchhhcccchHHHHHHHHHHHHCCeEeccCC-CcceEEeCCCcHHHHHHHHHHHHHHHHH
Q 011856 413 VYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ-FEAGFTSLAHSSDDIQHTITAAEKVKMR 473 (476)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~-~~~~~~~~~~t~e~i~~~~~~l~~~~~~ 473 (476)
+ ..++.+.|.++||.+...+ .+++|+++..+++++++++++|+++.++
T Consensus 280 ----------~---~~~~~~~l~~~gi~v~~f~~~~~iRis~~~~~~~~~~l~~al~~~~~~ 328 (330)
T PRK05664 280 ----------D---AAALHEFLARRGILTRLFEQPASLRFGLPADEADWARLDQALLAYRKE 328 (330)
T ss_pred ----------C---HHHHHHHHHHCCeEEEECCCCCeEEEECCCCHHHHHHHHHHHHHHHhh
Confidence 1 2577888999999998653 3568888887888999999999887654
No 167
>PRK07777 aminotransferase; Validated
Probab=99.93 E-value=3.7e-23 Score=207.10 Aligned_cols=334 Identities=16% Similarity=0.141 Sum_probs=210.4
Q ss_pred EEEecccChhhccCCCCcHHHHHHHHHHHHhcC-CCC---CCCHHHHHHHHHHHhhCC---CCC-eEEEeCCHHHHHHHH
Q 011856 100 EYIDYVGSWGPAIIGHADDQVLAALGETMKKGT-SFG---APCLLENVLAEMVISAVP---SIE-MVRFVNSGTEACMGV 171 (476)
Q Consensus 100 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~-~~~---~~~~~~~~la~~l~~~~~---~~e-~v~~~~sGseA~~~a 171 (476)
.++||..+... .. .++.+.+++.+.+.... .|. +..++++++++.+.+.++ .++ +|++++||++|+..+
T Consensus 25 ~~i~l~~g~p~--~~-~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~ 101 (387)
T PRK07777 25 GAVNLGQGFPD--ED-GPPEMLEAAQEAIAGGVNQYPPGPGIPELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEAIAAA 101 (387)
T ss_pred CeEEccCCCCC--CC-CCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHH
Confidence 45787777421 22 35678888877776532 222 124566677776665553 244 799999999999998
Q ss_pred HHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEE
Q 011856 172 LRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAII 251 (476)
Q Consensus 172 l~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi 251 (476)
+.. ...+++.|++..++|++.. ..+...|..+...+...... ... -|+++|++.+++ ++++|+
T Consensus 102 ~~~--~~~~gd~vli~~p~y~~~~-~~~~~~g~~~~~~~~~~~~~--------~~~---~d~~~l~~~~~~---~~~~v~ 164 (387)
T PRK07777 102 VLG--LVEPGDEVLLIEPYYDSYA-AVIAMAGAHRVPVPLVPDGR--------GFA---LDLDALRAAVTP---RTRALI 164 (387)
T ss_pred HHH--hcCCCCEEEEeCCCchhhH-HHHHHCCCEEEEeecCCccC--------CCc---CCHHHHHHhcCc---ccEEEE
Confidence 873 2345678888888887753 44444444332221111000 000 178999888863 466777
Q ss_pred EcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccccc-chhhcc-CCCC-c--hhhhhhhcC-CCCcEEE
Q 011856 252 LEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG-GAQEYF-GVTP-D--LTTLGKIIG-GGLPVGA 324 (476)
Q Consensus 252 ~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~-~~~~~~-g~~p-D--i~t~sK~lg-~G~~iG~ 324 (476)
+++.+|++|.+.+ .+.+++|.++|++|++++|+||+|.++ ..+.. .....+ +... + +.+|||.++ +|+|+||
T Consensus 165 l~~p~NPtG~~~~-~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~ 243 (387)
T PRK07777 165 VNSPHNPTGTVLT-AAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTFNVTGWKIGW 243 (387)
T ss_pred EcCCCCCCCccCC-HHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechhhccCcCceeEE
Confidence 7766777888775 445999999999999999999999877 43321 111111 1111 2 237999999 7999999
Q ss_pred EEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeece
Q 011856 325 YGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISG 402 (476)
Q Consensus 325 ~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~ 402 (476)
+++++++++.+.. .....+++.+.+.+.++..+++..+. +.+.+.++++.+.+.+.|++. ++....+..|.
T Consensus 244 ~~~~~~l~~~~~~---~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~----~~~~~~~~g~~ 316 (387)
T PRK07777 244 ACGPAPLIAAVRA---AKQYLTYVGGAPFQPAVAHALDHEDAWVAALRDSLQAKRDRLAAGLAEA----GFEVHDSAGTY 316 (387)
T ss_pred EecCHHHHHHHHH---HHhhcccCCCCHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHhC----CCCccCCCcce
Confidence 9999999887763 22233455566666666666642211 334455666666666666553 32222223455
Q ss_pred eEEEEEecCCCcCchhhcccchHHHHHHHHHHH-HCCeEeccCC---------CcceEEeCCCcHHHHHHHHHHHHHHHH
Q 011856 403 MFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ---------FEAGFTSLAHSSDDIQHTITAAEKVKM 472 (476)
Q Consensus 403 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~---------~~~~~~~~~~t~e~i~~~~~~l~~~~~ 472 (476)
++++.+..... ....++++.|+ ++||.+.|+. .+.+|+++..+++++++++++|.++..
T Consensus 317 ~~~~~~~~~~~-----------~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~~~~~~~~l~~~l~~l~~~~~ 385 (387)
T PRK07777 317 FLCADPRPLGY-----------DDGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFAFCKRDDTLDEAIRRLRALRG 385 (387)
T ss_pred EEEecccccCC-----------CCHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEEecCCHHHHHHHHHHHHHHhc
Confidence 66666532110 01257888886 5799998863 135788888899999999999987653
No 168
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.93 E-value=1.1e-23 Score=206.38 Aligned_cols=302 Identities=16% Similarity=0.071 Sum_probs=200.1
Q ss_pred CEEEecccChhhccCCCCcHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCC--CCCeEEEeCCHHHHHHHHHHHHH
Q 011856 99 NEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP--SIEMVRFVNSGTEACMGVLRLAR 176 (476)
Q Consensus 99 ~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~~~~~~~~~~la~~l~~~~~--~~e~v~~~~sGseA~~~al~~ar 176 (476)
.+++||.+|. +++|...+.+.. ..+. .||... .+|.+.++++++ ..++|++++|++|++.....
T Consensus 24 ~~~i~ls~Ne--np~~~~~~~~~~---~~~~-----~Yp~~~-~~L~~~ia~~~~~~~~~~I~i~~Gs~e~i~~l~~--- 89 (339)
T PRK06959 24 DAWLDLSTGI--NPHGYPVPPVPA---DAWR-----RLPEDD-DGLAACAARYYGAPDAAHVLPVAGSQAAIRALPA--- 89 (339)
T ss_pred hhhceeccCC--CCCCCCCCCCCH---HHHH-----hCCCch-HHHHHHHHHHhCCCCcccEEECcCHHHHHHHHHH---
Confidence 4689999998 888875333321 2222 246555 899999999886 35899999999999986544
Q ss_pred hccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccC
Q 011856 177 AFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVV 256 (476)
Q Consensus 177 ~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~ 256 (476)
.+ +++++++.+++|.++...+ ...|.. ++.++.++ +.+++ . ...+++++|+
T Consensus 90 ~~-~~g~v~v~~P~y~~y~~~~-~~~g~~-------------------~~~v~~~~-~~~~~---~---~~~v~l~nPn- 140 (339)
T PRK06959 90 LL-PRGRVGIAPLAYSEYAPAF-ARHGHR-------------------VVPLDEAA-DTLPA---A---LTHLIVVNPN- 140 (339)
T ss_pred hc-CCCeEEEcCCCcHHHHHHH-HHCCCE-------------------EEeecccc-hhccc---c---CCEEEEeCCC-
Confidence 33 3456888888887744333 333322 22333222 22211 1 1356677775
Q ss_pred CCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccchhhccCCCCchh---hhhhhcC-CCCcEEEEEecHHH
Q 011856 257 GNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLT---TLGKIIG-GGLPVGAYGGRRDI 331 (476)
Q Consensus 257 ~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pDi~---t~sK~lg-~G~~iG~~~~~~~i 331 (476)
|++|.+.+.++ +++|.+.|.++++++|+||+|..| ...... ...+ .++++ ||||.+| +|+|+||+++++++
T Consensus 141 NPTG~~~s~~~-l~~l~~~~~~~~~~vI~DEay~~~~~~~s~~--~~~~-~~~vi~l~SfSK~~gl~GlRiGy~v~~~~l 216 (339)
T PRK06959 141 NPTAERLPAAR-LLRWHAQLAARGGTLIVDEAFADTLPAASLA--AHTD-RPGLVVLRSVGKFFGLAGVRAGFVLAAPAL 216 (339)
T ss_pred CCCCCCCCHHH-HHHHHHHHHHcCCEEEEECCCccCCCcccch--hccC-CCCEEEEecChhhcCCcchheEEEecCHHH
Confidence 56777776555 888888899999999999999887 321111 1111 23433 8999999 89999999999999
Q ss_pred HHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEec
Q 011856 332 MEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTE 410 (476)
Q Consensus 332 ~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~ 410 (476)
++.+... ...++.|.+++.++.++|+.-.- ++..++++++++++.+.|+++ ++. +...+.++++.+.+
T Consensus 217 i~~l~~~-----~~~~~vs~~~q~a~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~----g~~--~~~~~~f~~~~~~~ 285 (339)
T PRK06959 217 LAALRDA-----LGAWTVSGPARHAVRAAFADAAWQAAMRERLAADGARLAALLRAH----GFA--VHATPLFSWTDDPR 285 (339)
T ss_pred HHHHHHh-----cCCCCCcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC----CCC--ccCcceEEEEeCCC
Confidence 9988742 23466788899888888852111 334455555566666666554 322 12345566665421
Q ss_pred CCCcCchhhcccchHHHHHHHHHHHHCCeEeccCC-CcceEEeCCCcHHHHHHHHHHHHHHHHHh
Q 011856 411 GPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ-FEAGFTSLAHSSDDIQHTITAAEKVKMRF 474 (476)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~-~~~~~~~~~~t~e~i~~~~~~l~~~~~~~ 474 (476)
..++.+.|.++||+++..+ .+++|+++..+++++++++++|+++++.+
T Consensus 286 ----------------~~~l~~~l~~~GI~vr~~~~~~~lRisi~~~~~e~~~l~~al~~~~~~~ 334 (339)
T PRK06959 286 ----------------AAALHAALARRGIWTRYFAPPPSVRFGLPADEAEWQRLEDALAECVPTL 334 (339)
T ss_pred ----------------HHHHHHHHHhCCeEEEECCCCCeEEEECCCCHHHHHHHHHHHHHHHHHH
Confidence 2578889999999998753 34688888778999999999999887754
No 169
>PRK07550 hypothetical protein; Provisional
Probab=99.93 E-value=2.6e-23 Score=208.13 Aligned_cols=331 Identities=16% Similarity=0.140 Sum_probs=208.5
Q ss_pred CCEEEecccChhhccCCCCcHHHHHHHHHHHHhcC--CCC---CCCHHHHHHHHHHHhhCC---CCCeEEEeCCHHHHHH
Q 011856 98 GNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT--SFG---APCLLENVLAEMVISAVP---SIEMVRFVNSGTEACM 169 (476)
Q Consensus 98 G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~--~~~---~~~~~~~~la~~l~~~~~---~~e~v~~~~sGseA~~ 169 (476)
|..++||..+.. .+. .++.+.+++.+.+.... .|+ +..+++.++++++.+..+ .+++|++++|+++|+.
T Consensus 28 ~~~~i~l~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~ 104 (386)
T PRK07550 28 DGPLIDLSQAVP--GYP-PPPELLRALAEAAADPAAHLYGPVEGLPELREAYAAHYSRLYGAAISPEQVHITSGCNQAFW 104 (386)
T ss_pred CCCeEEeCCCCC--CCC-CCHHHHHHHHHHHhCcCCcCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHH
Confidence 344678887742 222 47788888887765322 121 245667788888876543 4689999999999999
Q ss_pred HHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEE
Q 011856 170 GVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAA 249 (476)
Q Consensus 170 ~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~ 249 (476)
.+++.. ...++.|++.+++|.++.. .+...|..+..++.....+. ..|++++++.+++ ++++
T Consensus 105 ~~~~~l--~~~gd~Vlv~~p~y~~~~~-~~~~~g~~~~~v~~~~~~~~------------~~~~~~l~~~~~~---~~~~ 166 (386)
T PRK07550 105 AAMVTL--AGAGDEVILPLPWYFNHKM-WLDMLGIRPVYLPCDEGPGL------------LPDPAAAEALITP---RTRA 166 (386)
T ss_pred HHHHHh--cCCCCEEEEcCCCCcchHH-HHHhcCCEEEEEecCCCcCC------------CCCHHHHHHHhcc---cCcE
Confidence 988852 2456778888888866533 33444443332221100111 0178899998874 3444
Q ss_pred -EEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccc--hhhccCCCCc---hhhhhhhcC-CCCc
Q 011856 250 -IILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGG--AQEYFGVTPD---LTTLGKIIG-GGLP 321 (476)
Q Consensus 250 -vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~--~~~~~g~~pD---i~t~sK~lg-~G~~ 321 (476)
+++.| +|++|.+.+ .+.+++|.++|++||+++|+||+|.+| ..+... .....+...+ +.+|||.++ +|+|
T Consensus 167 v~~~~P-~NPtG~~~~-~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~R 244 (386)
T PRK07550 167 IALVTP-NNPTGVVYP-PELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGHR 244 (386)
T ss_pred EEEeCC-CCCCCcccC-HHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchhhccCcccc
Confidence 55555 466777765 555999999999999999999999887 322111 1111111122 348999999 8999
Q ss_pred EEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHhhhcCCceEeee
Q 011856 322 VGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGY 399 (476)
Q Consensus 322 iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~ 399 (476)
+||+++++++++.+.. .....+.+.+.+++.++...++.+++ ++..++++++.+.+.+.|.+. ..+ ...+.
T Consensus 245 iG~i~~~~~~~~~~~~---~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~---~~~-~~~~~ 317 (386)
T PRK07550 245 VGAVVASPARIAEIEK---FMDTVAICAPRIGQIAVAWGLPNLADWRAGNRAEIARRRDAFRAVFARL---PGW-ELLAS 317 (386)
T ss_pred eEeeecCHHHHHHHHH---HHhhcccCCCcHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhC---CCc-eeCCC
Confidence 9999999999887763 22233455678888887777753321 233444555555555555543 122 11233
Q ss_pred eceeEEEEEecCCCcCchhhcccchHHHHHHHHHHH-HCCeEeccCC------CcceEEeCC-CcHHHHHHHHHHHHHH
Q 011856 400 ISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ------FEAGFTSLA-HSSDDIQHTITAAEKV 470 (476)
Q Consensus 400 ~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~------~~~~~~~~~-~t~e~i~~~~~~l~~~ 470 (476)
.|.++++.+.... ....+++..|+ ++||.+.|+. ...+|+++. .+++++++++++|.++
T Consensus 318 g~~~~~~~~~~~~------------~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~~~~~~~~l~~~ 384 (386)
T PRK07550 318 GAYFAYVRHPFPD------------RPSREVARRLAKEAGILCLPGTMFGPGQEGYLRLAFANADVAGIGELVERLRAF 384 (386)
T ss_pred ceEEEEecCCCCC------------CCHHHHHHHHHHhcCEEEeCchhhCCCCCCEEEEEeecCCHHHHHHHHHHHHhh
Confidence 4566676663211 11256777765 6799998863 246788776 4789999999999864
No 170
>PRK03321 putative aminotransferase; Provisional
Probab=99.93 E-value=5.5e-24 Score=210.42 Aligned_cols=318 Identities=17% Similarity=0.165 Sum_probs=208.8
Q ss_pred EEEecccChhhccCCCCcHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHHHhc
Q 011856 100 EYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAF 178 (476)
Q Consensus 100 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~~~~~~~~~~la~~l~~~~~-~~e~v~~~~sGseA~~~al~~ar~~ 178 (476)
.+|||..+. ..+| .++.+.+++.+.+..... |+.....++.+.+++++. .+++|++++|.++++..+++. ..
T Consensus 23 ~~i~l~~~~--~~~~-~~~~~~~a~~~~~~~~~~--y~~~g~~~lr~~ia~~~~~~~~~I~~~~G~~~~l~~~~~~--~~ 95 (352)
T PRK03321 23 GAIKLSSNE--TPFG-PLPSVRAAIARAAAGVNR--YPDMGAVELRAALAEHLGVPPEHVAVGCGSVALCQQLVQA--TA 95 (352)
T ss_pred cceeccCCC--CCCC-CCHHHHHHHHHHHHhcCc--CCCCcHHHHHHHHHHHhCcCHHHEEECCCHHHHHHHHHHH--hc
Confidence 378888774 3344 467899999887764332 344456677777777775 567999999999888888773 23
Q ss_pred cCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCC
Q 011856 179 TGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGN 258 (476)
Q Consensus 179 ~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~ 258 (476)
.+++.|++..++|.. +.......|..+...+.....+ .|++++++.++. ++++|+++.++++
T Consensus 96 ~~gd~Vli~~p~y~~-~~~~~~~~g~~~~~v~~~~~~~--------------~~~~~l~~~~~~---~~~~v~l~~p~NP 157 (352)
T PRK03321 96 GPGDEVIFAWRSFEA-YPILVQVAGATPVQVPLTPDHT--------------HDLDAMAAAITD---RTRLIFVCNPNNP 157 (352)
T ss_pred CCCCEEEeCCCCHHH-HHHHHHHcCCEEEEccCCCCCC--------------CCHHHHHHhhcc---CCCEEEEeCCCCC
Confidence 456778777777643 2223333343332221110111 178999888863 4566666666777
Q ss_pred CCcccCCHHHHHHHHHHHHH--hCCEEEEeccccCc-ccccc-chhhccCCCCchh---hhhhhcC-CCCcEEEEEecHH
Q 011856 259 SGFIAPKPDFLNAIRRITKE--NGALLIFDEVMTGF-RLAYG-GAQEYFGVTPDLT---TLGKIIG-GGLPVGAYGGRRD 330 (476)
Q Consensus 259 ~G~i~~~~~~l~~l~~l~~~--~g~llI~DEv~~g~-r~g~~-~~~~~~g~~pDi~---t~sK~lg-~G~~iG~~~~~~~ 330 (476)
+|.+.+ .++|.++|++ +|+++|+||+|.+| ..+.. .........++++ +|||.+| +|+|+||++++++
T Consensus 158 tG~~~~----~~~l~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~~ 233 (352)
T PRK03321 158 TGTVVT----PAELARFLDAVPADVLVVLDEAYVEYVRDDDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGHPE 233 (352)
T ss_pred cCCCcC----HHHHHHHHHhCCCCeEEEEechHHHhccCcCCCcHHHHHhhCCCEEEEecchHHhhhHHHhhhhhcCCHH
Confidence 899888 5667777766 69999999999888 43321 1122222234544 7999999 8999999999999
Q ss_pred HHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEe
Q 011856 331 IMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFT 409 (476)
Q Consensus 331 i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~ 409 (476)
+++.+... ..+++.+++++.++.++|+..+. .+..+++.+..+.+.+.|++ .++. ..+..|.++++.+.
T Consensus 234 ~~~~~~~~-----~~~~~~s~~~q~~a~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~----~~~~-~~~~~g~~i~i~l~ 303 (352)
T PRK03321 234 VIAALRKV-----AVPFSVNSLAQAAAIASLAAEDELLERVDAVVAERDRVRAALRA----AGWT-VPPSQANFVWLPLG 303 (352)
T ss_pred HHHHHHHh-----cCCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH----CCCc-cCCCCCCEEEEeCC
Confidence 99988741 24567889999988888752221 12222333333444444443 3322 12345788887763
Q ss_pred cCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCCcceEEeCCCcHHHHHHHHHHHHHHHH
Q 011856 410 EGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHTITAAEKVKM 472 (476)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~~~~~t~e~i~~~~~~l~~~~~ 472 (476)
.. ..++.+.|.++||.+.+.+...+|+++ .+.+++++++++|+++++
T Consensus 304 ~~---------------~~~~~~~l~~~gI~v~~~~~~~iRi~~-~~~~~~~~~~~al~~~~~ 350 (352)
T PRK03321 304 ER---------------TADFAAAAAEAGVVVRPFAGEGVRVTI-GAPEENDAFLRAARAWRA 350 (352)
T ss_pred CC---------------HHHHHHHHHHCCEEEEccCCCcEEEee-CCHHHHHHHHHHHHHHhc
Confidence 11 257888899999999987655688886 588999999999998765
No 171
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=2.4e-23 Score=206.08 Aligned_cols=318 Identities=15% Similarity=0.119 Sum_probs=203.5
Q ss_pred CCEEEecccChhhccCCCCcHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHHH
Q 011856 98 GNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLAR 176 (476)
Q Consensus 98 G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~~~~~~~~~~la~~l~~~~~-~~e~v~~~~sGseA~~~al~~ar 176 (476)
++.+|||..+. +.++ .+|.+.+++.+.+.... ..|+.....+|.+.+++++. .+++|++++|+++++..+++..
T Consensus 23 ~~~~i~l~~~~--~~~~-~~~~~~~a~~~~~~~~~-~~y~~~~~~~lr~aia~~~~~~~~~I~it~G~~~al~~~~~~l- 97 (353)
T PRK05387 23 LAKLIKLNTNE--NPYP-PSPKVLEAIRAALGDDL-RLYPDPNADALRQAIAAYYGLDPEQVFVGNGSDEVLAHAFLAF- 97 (353)
T ss_pred ccceeeccCCC--CCCC-CCHHHHHHHHHHhhhhh-hcCCCCcHHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHh-
Confidence 35678998885 3444 47899999988776422 22343334678888888775 6789999999999999999842
Q ss_pred hccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccC
Q 011856 177 AFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVV 256 (476)
Q Consensus 177 ~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~ 256 (476)
...++.|++.+++|.. +.......|..+...+.....+ -|++++++ . ....++++| +
T Consensus 98 -~~~gd~vlv~~P~y~~-~~~~~~~~g~~~~~v~~~~~~~--------------~d~~~l~~---~---~~~v~~~~P-~ 154 (353)
T PRK05387 98 -FNHDRPLLFPDITYSF-YPVYAGLYGIPYEEIPLDDDFS--------------IDVEDYLR---P---NGGIIFPNP-N 154 (353)
T ss_pred -cCCCCEEEEeCCCHHH-HHHHHHHcCCEEEEeecCCCCC--------------CCHHHHHh---c---CCEEEEeCC-C
Confidence 3456778888888744 3333444454333222111011 16777652 1 223444455 6
Q ss_pred CCCCcccCCHHHHHHHHHHHHHh-CCEEEEeccccCc-cccccchhhccCCCCchh---hhhhhcC-CCCcEEEEEecHH
Q 011856 257 GNSGFIAPKPDFLNAIRRITKEN-GALLIFDEVMTGF-RLAYGGAQEYFGVTPDLT---TLGKIIG-GGLPVGAYGGRRD 330 (476)
Q Consensus 257 ~~~G~i~~~~~~l~~l~~l~~~~-g~llI~DEv~~g~-r~g~~~~~~~~g~~pDi~---t~sK~lg-~G~~iG~~~~~~~ 330 (476)
|++|.+.+ .+++.++++++ ++++|+||+|..| ... . ....+..++++ +|||.++ .|+|+||++++++
T Consensus 155 NPtG~~~~----~~~~~~l~~~~~~~~livDe~y~~~~~~~-~--~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~~ 227 (353)
T PRK05387 155 APTGIALP----LAEIERILAANPDSVVVIDEAYVDFGGES-A--IPLIDRYPNLLVVQTFSKSRSLAGLRVGFAIGHPE 227 (353)
T ss_pred CCCCCCCC----HHHHHHHHHhCCCcEEEEeCcccccCCcc-h--HHHHhhCCCEEEEEehhHhhcchhhhceeeecCHH
Confidence 67888888 55555666554 9999999999877 221 1 11111123322 7999999 8999999999999
Q ss_pred HHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEe
Q 011856 331 IMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFT 409 (476)
Q Consensus 331 i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~ 409 (476)
+++.+..... ...+++.+.+++.++.++|+..+. ++..+++.++.+++.+.|++. ++. ..+..|.++++.+.
T Consensus 228 ~~~~l~~~~~--~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~-~~~~~~~~~~~~~~ 300 (353)
T PRK05387 228 LIEALNRVKN--SFNSYPLDRLAQAGAIAAIEDEAYFEETRAKVIATRERLVEELEAL----GFE-VLPSKANFVFARHP 300 (353)
T ss_pred HHHHHHHhhc--cCCCCCcCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC----CCe-ECCCcCcEEEEECC
Confidence 9888763211 123456788888888777742111 344555556666666666553 332 12445666666542
Q ss_pred cCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCC----cceEEeCCCcHHHHHHHHHHHHHHHH
Q 011856 410 EGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF----EAGFTSLAHSSDDIQHTITAAEKVKM 472 (476)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~----~~~~~~~~~t~e~i~~~~~~l~~~~~ 472 (476)
.. ...++.+.|.++||.+.+.+. ..+|+++. +++++++++++|++++.
T Consensus 301 ~~--------------~~~~~~~~l~~~gi~v~~~~~~~~~~~iRis~~-~~~~~~~~~~~L~~~~~ 352 (353)
T PRK05387 301 SH--------------DAAELAAKLRERGIIVRHFNKPRIDQFLRITIG-TDEEMEALVDALKEILA 352 (353)
T ss_pred CC--------------CHHHHHHHHHHCCEEEEECCCCCCCCeEEEEeC-CHHHHHHHHHHHHHHhh
Confidence 10 125788889999999865532 35788776 77999999999998764
No 172
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.93 E-value=2.8e-24 Score=202.57 Aligned_cols=330 Identities=18% Similarity=0.156 Sum_probs=216.3
Q ss_pred CcHHHHHHHHHHHHhc-CC----CCCCCHHHHHHHHHHHhhCC----CCCeEEEeCCHHHHHHHHHHHHHhccCCceEEE
Q 011856 116 ADDQVLAALGETMKKG-TS----FGAPCLLENVLAEMVISAVP----SIEMVRFVNSGTEACMGVLRLARAFTGRERIIK 186 (476)
Q Consensus 116 ~~p~v~~a~~~~l~~~-~~----~~~~~~~~~~la~~l~~~~~----~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~ 186 (476)
.+..|.+++++.+... .+ ..+..++...|+++++++++ ..++|++|+|+.+++..++.. .+..++.||+
T Consensus 45 ~P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~~--l~~~GDeVii 122 (420)
T KOG0257|consen 45 PPKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALLG--LLNPGDEVIV 122 (420)
T ss_pred CcHHHHHHHHHHhccchhccccccCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHHH--HcCCCCEEEE
Confidence 4667888888887763 21 22457888899999998665 356899999999999988884 4567899999
Q ss_pred EeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceee-ccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCC
Q 011856 187 FEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLT-APFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPK 265 (476)
Q Consensus 187 ~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~ 265 (476)
+++.|..+.......++.++.....+ ..| ++.. .-..|.+.||..+.+ ++++|+++..+|++|.+.+.
T Consensus 123 ~eP~fd~Y~~~~~maG~tpv~v~~~~-~~g-------~~~s~~~~~D~~~le~~~t~---kTk~Ii~ntPhNPtGkvfsR 191 (420)
T KOG0257|consen 123 FEPFFDCYIPQVVMAGGTPVFVPLKP-KEG-------NVSSSDWTLDPEELESKITE---KTKAIILNTPHNPTGKVFSR 191 (420)
T ss_pred ecCcchhhhhHHhhcCCcceeecccc-ccc-------cccCccccCChHHHHhhccC---CccEEEEeCCCCCcCcccCH
Confidence 99999988777766666654321111 111 0000 012389999999985 68888888888888999877
Q ss_pred HHHHHHHHHHHHHhCCEEEEeccccCc-cccc---cchhh--ccCCCCchhhhhhhcC-CCCcEEEEEecHHHHHhhcCC
Q 011856 266 PDFLNAIRRITKENGALLIFDEVMTGF-RLAY---GGAQE--YFGVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPA 338 (476)
Q Consensus 266 ~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~---~~~~~--~~g~~pDi~t~sK~lg-~G~~iG~~~~~~~i~~~l~~~ 338 (476)
++ |++|.+||++||+++|+||||--+ ..+. .++.. .+.....+.++||+++ .|||+||+++++.++..+.+
T Consensus 192 ee-Le~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm~ertitvgS~gKtf~~TGWrlGW~igp~~L~~~~~~- 269 (420)
T KOG0257|consen 192 EE-LERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGMYERTITVGSFGKTFGVTGWRLGWAIGPKHLYSALFP- 269 (420)
T ss_pred HH-HHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecCCchhheEEEeccccceeeeeeeeeeeeechHHhhhhHHH-
Confidence 66 999999999999999999999655 5553 22221 1222333457999999 79999999998888877763
Q ss_pred CCccccCCCCCcHHHHHHHHHHHHHh---cC-------CCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEE
Q 011856 339 GPMYQAGTLSGNPLAMTAGIHTLKRL---KE-------PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFF 408 (476)
Q Consensus 339 ~~~~~~~t~~~~~~~~aaa~aal~~~---~~-------~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~ 408 (476)
......+..+...+.|..+++..- .+ .++...++++++.+.+.|.++ ++....+..+.++++++
T Consensus 270 --vh~~~~~~~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~l----g~~v~~p~gayyl~adf 343 (420)
T KOG0257|consen 270 --VHQNFVFTCPTPIQEASAAAFALELACLQPGGSYFITELVKEYKEKRDILAKALEEL----GLKVTGPEGAYYLWADF 343 (420)
T ss_pred --HhhccccccCcHHHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHhc----CCccccCCCceEEEEec
Confidence 223334444555555555554422 21 225566777777777777776 33333455677788888
Q ss_pred ecC-CCcCchhh-cccchHHHHHHHHHHH-HCCeEeccCCCc-----------ceEEeCCCcHHHHHHHHHHHHH
Q 011856 409 TEG-PVYNFEDA-KKSETTKFARFYRGML-EEGVYFAPSQFE-----------AGFTSLAHSSDDIQHTITAAEK 469 (476)
Q Consensus 409 ~~~-~~~~~~~~-~~~~~~~~~~~~~~l~-~~Gv~~~~~~~~-----------~~~~~~~~t~e~i~~~~~~l~~ 469 (476)
... +...+... ..++ .-.+...|. +.|+.+-|.... .+++++.-+++-++.++++|++
T Consensus 344 s~~~~~~~~~~~~~~~~---d~~~~~wl~~~~Gv~~IP~saF~s~~~~~~~~~~~r~~~~k~~~~L~~a~e~l~~ 415 (420)
T KOG0257|consen 344 SLAKSWPFFEEILEKPD---DFKFVRWLIKEGGVVVIPPSAFGSREHIKVAERLVRFCFCKADETLRKAIERLKK 415 (420)
T ss_pred cccccCCcchhhccCCC---ceeeehhhhccCcEEEeCchhcCCchhhHHHHHHHHHHHHhhHHHHHHHHHHHhh
Confidence 611 11111000 0111 124555665 558877665311 2355677788888888888873
No 173
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.93 E-value=7.1e-24 Score=207.58 Aligned_cols=302 Identities=15% Similarity=0.106 Sum_probs=190.2
Q ss_pred EEEecccChhhccCCCCcHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHHHhc
Q 011856 100 EYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAF 178 (476)
Q Consensus 100 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~~~~~~~~~~la~~l~~~~~-~~e~v~~~~sGseA~~~al~~ar~~ 178 (476)
.++||..|. |+++. .... ..||.....+|.+.+++++. ..++|++++|+++++..++++ .
T Consensus 17 ~~i~l~~Ne--np~~~------------~~~~--~~Yp~~~~~~lr~~ia~~~~~~~~~I~it~Gs~~~l~~~~~~---~ 77 (332)
T PRK06425 17 RIIDFSANI--NDFMD------------IGDI--SIYPEISYTDIEDQIKIYTQGLKIKVLIGPGLTHFIYRLLSY---I 77 (332)
T ss_pred CEEEecccc--CCCcC------------hhhc--ccCcCcCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHH---h
Confidence 578888886 55530 1111 23577677899999999887 678999999999999998873 3
Q ss_pred cCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCC
Q 011856 179 TGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGN 258 (476)
Q Consensus 179 ~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~ 258 (476)
+++++++.+++|..+... ....|..+...+... .+ .|.+.++ +. ++++|+++..+|+
T Consensus 78 -~~~~vv~~~P~y~~y~~~-~~~~G~~v~~vp~~~-~~--------------~~~~~l~----~~--~~k~v~l~nP~NP 134 (332)
T PRK06425 78 -NVGNIIIVEPNFNEYKGY-AFTHGIRISALPFNL-IN--------------NNPEILN----NY--NFDLIFIVSPDNP 134 (332)
T ss_pred -CCCcEEEeCCChHHHHHH-HHHcCCeEEEEeCCc-cc--------------CcHHHHh----hc--CCCEEEEeCCCCC
Confidence 335688888888775433 333444332211100 00 1333333 22 4445554444566
Q ss_pred CCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccchhhccCCCCchh---hhhhhcC-CCCcEEEEEecHHHHH
Q 011856 259 SGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLT---TLGKIIG-GGLPVGAYGGRRDIME 333 (476)
Q Consensus 259 ~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pDi~---t~sK~lg-~G~~iG~~~~~~~i~~ 333 (476)
+|.+.+.++ +++|.++|++||++||+||+|..| ..+........+-.++++ ||||.++ +|+|+||+++++++++
T Consensus 135 TG~~~s~~~-~~~l~~~a~~~~~~iI~DE~Y~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiGy~v~~~~li~ 213 (332)
T PRK06425 135 LGNLISRDS-LLTISEICRKKGALLFIDEAFIDFVPNRAEEDVLLNRSYGNVIIGRSLTKILGIPSLRIGYIATDDYNMK 213 (332)
T ss_pred cCCccCHHH-HHHHHHHHHHcCCEEEEecchhccccccchhHHHHhccCCCEEEEeecHHhcCCchhhheeeecCHHHHH
Confidence 777776555 999999999999999999999888 433111111112223333 7999999 9999999999999998
Q ss_pred hhcCCCCccccCCCCCcHHHHHHHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCC
Q 011856 334 MVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLK-EPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGP 412 (476)
Q Consensus 334 ~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~ 412 (476)
.+... ...++.+.+++.+. ...+.-. .+...+.++++.+++.+.|++. ++....++.|.++++.+.+
T Consensus 214 ~l~~~-----~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~----g~~~~~~~~g~f~~~~~~~-- 281 (332)
T PRK06425 214 ISRKI-----TEPWSVCDPAIDFI-RSIDLDYVAKHSLDIMENERSYLINNLEAM----GFRAAGDPSANFITFMIPD-- 281 (332)
T ss_pred HHHHc-----CCCCccCHHHHHHH-HHhhhHHHHHHHHHHHHHHHHHHHHHHHHC----CCEECCCCCceEEEEEcCC--
Confidence 88742 12334444433322 1111100 0234455555556666666543 3222124567888887631
Q ss_pred CcCchhhcccchHHHHHHHHHHHHCCeEeccCCC------cceEEeCCCcHHHHHHHHHHHHHHH
Q 011856 413 VYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF------EAGFTSLAHSSDDIQHTITAAEKVK 471 (476)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~------~~~~~~~~~t~e~i~~~~~~l~~~~ 471 (476)
..++.+.|+++||.+.++.. +++|+++. +++++++++++|++++
T Consensus 282 --------------~~~~~~~l~~~gi~v~~~~~f~~~~~~~iRis~~-~~~~~~~l~~al~~~~ 331 (332)
T PRK06425 282 --------------AHDFYSYLLKNGILVRLLDDYECLGEQYIRIAIR-RRSFNIKLVNALRNFL 331 (332)
T ss_pred --------------HHHHHHHHHHCCeEEEECCCCCCCCCCEEEEEeC-CHHHHHHHHHHHHHHh
Confidence 25788899999999988632 35677766 6789999999998775
No 174
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.93 E-value=5.8e-23 Score=208.13 Aligned_cols=338 Identities=18% Similarity=0.181 Sum_probs=227.8
Q ss_pred cCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhc--C---CCC---CCCHHHHHHHHHHHhhCC---CCCeEEEeCCH
Q 011856 96 IDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKG--T---SFG---APCLLENVLAEMVISAVP---SIEMVRFVNSG 164 (476)
Q Consensus 96 ~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~--~---~~~---~~~~~~~~la~~l~~~~~---~~e~v~~~~sG 164 (476)
.+....+||..++. ++--.......+++.+.+... . .++ +..+++.++++.+....+ .+++|++|+|.
T Consensus 86 ~~~~~~i~f~~g~p-~~~~fp~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~ 164 (459)
T COG1167 86 EDDPSVIDFAGGLP-DPSLFPLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGA 164 (459)
T ss_pred cCCCceecCCCCCC-CcccCCHHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEEeCCH
Confidence 34467889988862 221124556666666655431 1 111 234667777777773332 57899999999
Q ss_pred HHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCC
Q 011856 165 TEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK 244 (476)
Q Consensus 165 seA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~ 244 (476)
.+|++.++++ ...+++.|++-+++|++. ...+...|..+..++.. ..|+ |+++||+.++++
T Consensus 165 q~al~l~~~~--l~~pGd~v~vE~PtY~~~-~~~~~~~g~~~~~vp~d-~~G~--------------~~e~le~~~~~~- 225 (459)
T COG1167 165 QQALDLLLRL--LLDPGDTVLVEDPTYPGA-LQALEALGARVIPVPVD-EDGI--------------DPEALEEALAQW- 225 (459)
T ss_pred HHHHHHHHHH--hCCCCCEEEEcCCCcHHH-HHHHHHcCCcEEecCCC-CCCC--------------CHHHHHHHHhhc-
Confidence 9999999884 233567777778899984 44445555544433222 3343 899999999876
Q ss_pred CCeEEEEEcccCCC-CCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccc----hhhccCCCCchhhhhhhcCC
Q 011856 245 GEIAAIILEPVVGN-SGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGG----AQEYFGVTPDLTTLGKIIGG 318 (476)
Q Consensus 245 ~~~a~vi~ep~~~~-~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~----~~~~~g~~pDi~t~sK~lg~ 318 (476)
+++++++.|.+.| +|.+.+.+. .++|.++|++||+++|.||.|..| ..+..- +.+..+-+.-+.||||.+..
T Consensus 226 -~~k~~y~~P~~qNPtG~tms~~r-R~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld~~~rViy~gSFSK~l~P 303 (459)
T COG1167 226 -KPKAVYVTPTFQNPTGVTMSLER-RKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALDAPGRVIYLGSFSKTLAP 303 (459)
T ss_pred -CCcEEEECCCCCCCCCCccCHHH-HHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChHhhCCCCCEEEEeeehhhccc
Confidence 7889999997755 777776555 999999999999999999999888 443221 11122223335589999999
Q ss_pred CCcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH---HHHHhhhcC---
Q 011856 319 GLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQG---IIDAGKKAG--- 392 (476)
Q Consensus 319 G~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~---L~~~~~~~~--- 392 (476)
|+|+||+++++++++.+. ...+..+.+.+.+.+.+....+. +..+.+++++++..++++ +.+...++.
T Consensus 304 glRlG~vv~p~~~~~~~~---~~k~~~~~~~s~~~Q~~la~~l~---~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~~~ 377 (459)
T COG1167 304 GLRLGYVVAPPELIEKLL---RLKQAADLGPSSLSQAALAAFLL---SGHYDRHLRRLRREYARRRDALLEALAEYLPEL 377 (459)
T ss_pred ccceeeeeCCHHHHHHHH---HHHHHhcCCCChHHHHHHHHHHH---cCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 999999999999998887 33455566777887777665554 333444444444444333 323333332
Q ss_pred CceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEecc-CC--------CcceEEeCC-CcHHHHHH
Q 011856 393 HAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAP-SQ--------FEAGFTSLA-HSSDDIQH 462 (476)
Q Consensus 393 ~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~-~~--------~~~~~~~~~-~t~e~i~~ 462 (476)
..+..+..|+++|+++... ....++.+.++++|+.+.+ +. .+.+++++. .+++++++
T Consensus 378 ~~~~~p~gG~flwl~l~~~-------------~~~~~l~~~a~~~gv~i~~~g~~f~~~~~~~~~~Rl~~s~~~~e~i~~ 444 (459)
T COG1167 378 ATWTRPEGGLFLWLELPEG-------------IDARELLAAALEKGVVVTPLGSAFSADGDPRNGLRLSFSSPSEEEIEE 444 (459)
T ss_pred eeeecCCceEEEEEEcCCC-------------CCHHHHHHHHHHCCCEEEcCCccccCCCCCCCeEEEEcCCCCHHHHHH
Confidence 2334455688999998542 1236888999999999988 32 124677654 47999999
Q ss_pred HHHHHHHHHHHh
Q 011856 463 TITAAEKVKMRF 474 (476)
Q Consensus 463 ~~~~l~~~~~~~ 474 (476)
.+.+|.+++.+.
T Consensus 445 gi~~l~~~~~~~ 456 (459)
T COG1167 445 GIKRLAALLREA 456 (459)
T ss_pred HHHHHHHHHHHH
Confidence 999999998764
No 175
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=1.7e-23 Score=207.18 Aligned_cols=320 Identities=14% Similarity=0.093 Sum_probs=207.5
Q ss_pred CCEEEecccChhhccCCCCcHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCC-C-CCeEEEeCCHHHHHHHHHHHH
Q 011856 98 GNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-S-IEMVRFVNSGTEACMGVLRLA 175 (476)
Q Consensus 98 G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~~~~~~~~~~la~~l~~~~~-~-~e~v~~~~sGseA~~~al~~a 175 (476)
++.++|+..|. ++++ .+|.+++++.+.+......+|+.....+|.+.+++++. . .++|++++|+++++..++++.
T Consensus 25 ~~~~i~l~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~~~~lr~~ia~~~~~~~~~~I~~t~G~~~~i~~~~~~~ 101 (356)
T PRK04870 25 ATGMVKLDAME--NPYR-LPAELRAELGERLAEVALNRYPDPRAAALKAALRAAMGVPAGADVLLGNGSDELIQLLALAC 101 (356)
T ss_pred CCCceeCcCCC--CCCC-CCHHHHHHHHHHhhccccccCCCCCHHHHHHHHHHHhCcCCCCcEEEcCCHHHHHHHHHHHh
Confidence 45788887763 4444 68899999999886533233444445677788887775 2 258999999999999988842
Q ss_pred HhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEccc
Q 011856 176 RAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPV 255 (476)
Q Consensus 176 r~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~ 255 (476)
...++.|++.+++|.++ .......|..+...+.....+ -|++++++.++.+ ++++|++...
T Consensus 102 --~~~gd~vlv~~P~y~~~-~~~~~~~g~~~~~i~~~~~~~--------------~d~~~l~~~~~~~--~~~~v~l~~p 162 (356)
T PRK04870 102 --AKPGATVLAPEPGFVMY-RMSAKLAGLEFVGVPLTADFT--------------LDLPAMLAAIAEH--RPALVFLAYP 162 (356)
T ss_pred --cCCCCEEEECCCCHHHH-HHHHHHcCCEEEEecCCCCCC--------------CCHHHHHHHhhcC--CCCEEEEcCC
Confidence 34567788888888764 333444455443322211111 1789999998743 4566666555
Q ss_pred CCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccchhhccCCCCchhhhhhhcC-CCCcEEEEEecHHHHH
Q 011856 256 VGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIG-GGLPVGAYGGRRDIME 333 (476)
Q Consensus 256 ~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pDi~t~sK~lg-~G~~iG~~~~~~~i~~ 333 (476)
++++|.+.+.++ +++|.++| ++++|+||+|..| .....-....++...-+-+||| ++ +|+|+||+++++++++
T Consensus 163 ~NPtG~~~~~~~-~~~i~~~~---~~~ii~De~y~~~~~~~~~~~~~~~~~vi~~~S~SK-~~~~GlRiG~~i~~~~~i~ 237 (356)
T PRK04870 163 NNPTGNLFDDAD-VERIIEAA---PGLVVVDEAYQPFAGDSWLPRLARFPNLLVMRTVSK-LGLAGLRLGYLAGHPAWIA 237 (356)
T ss_pred CCCCCCCCCHHH-HHHHHHHC---CCEEEEECCchhhcCcchHHHHhhCCCEEEEecchh-hhhHHHhhhhhhCCHHHHH
Confidence 677888887444 66666666 7899999999877 3211101111111111237999 77 6999999999999998
Q ss_pred hhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCC
Q 011856 334 MVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGP 412 (476)
Q Consensus 334 ~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~ 412 (476)
.+.... ..++.+.+++.++..+++..+. ++..++++++.+.+.+.|+++ .++ ...+..|.++++.+.+
T Consensus 238 ~~~~~~-----~~~~~~~~~q~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~---~~~-~~~~~~~~~~~~~~~~-- 306 (356)
T PRK04870 238 ELDKVR-----PPYNVNVLTQATALFALEHVDVLDAQAAQLRAERTRLAAALAAL---PGV-TVFPSAANFILVRVPD-- 306 (356)
T ss_pred HHHHcc-----CCCcCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC---CCc-EECCCCCeEEEEECCC--
Confidence 886421 2345677888777777753211 334455566666666666543 122 2234567777776531
Q ss_pred CcCchhhcccchHHHHHHHHHHHHCCeEeccCC------CcceEEeCCCcHHHHHHHHHHHHHH
Q 011856 413 VYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEKV 470 (476)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~------~~~~~~~~~~t~e~i~~~~~~l~~~ 470 (476)
..++.+.|.++||.+.++. .+.+|+++. +.+++++++++|+++
T Consensus 307 --------------~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis~~-~~~~~~~l~~al~~~ 355 (356)
T PRK04870 307 --------------AAAVFDGLKTRGVLVKNLSGMHPLLANCLRVTVG-TPEENAQFLAALKAA 355 (356)
T ss_pred --------------HHHHHHHHHHCCEEEEECCCCCCCCCCeEEEeCC-CHHHHHHHHHHHHHh
Confidence 1467788899999998753 235678766 688999999999875
No 176
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.92 E-value=1.3e-23 Score=210.86 Aligned_cols=332 Identities=14% Similarity=0.095 Sum_probs=202.6
Q ss_pred EEEecccChhhccCCCCc--HHHHHHHHHHHHhcCC--CC---CCCHHHHHHHHHHHhhCC---CCCeE--EEeCCHHHH
Q 011856 100 EYIDYVGSWGPAIIGHAD--DQVLAALGETMKKGTS--FG---APCLLENVLAEMVISAVP---SIEMV--RFVNSGTEA 167 (476)
Q Consensus 100 ~~iD~~~~~~~~~lG~~~--p~v~~a~~~~l~~~~~--~~---~~~~~~~~la~~l~~~~~---~~e~v--~~~~sGseA 167 (476)
..|||..|...++-++.+ +.+.+++.+.++.... |+ +..++++++++++.+... .++++ ++|+|+++|
T Consensus 27 ~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~i~v~iT~Ga~~a 106 (396)
T PRK09257 27 DKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETETTKNYLPIEGLAAYRQAVQELLFGADSPALAAGRVATVQTPGGTGA 106 (396)
T ss_pred CcEecceeeEECCCCCEeccHHHHHHHHHhcccccCCCcCCCCCCHHHHHHHHHHhcCCCCcccccCeEEEEecCCccHH
Confidence 357877775333333333 6888888777654322 22 234666777777655432 46676 999999999
Q ss_pred HHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCC--CCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCC
Q 011856 168 CMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGL--PDSPGVPKGATYETLTAPFNDVSALENLFENNKG 245 (476)
Q Consensus 168 ~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~ 245 (476)
+..++++......++.|++.+++|.++. ..+...|..+..++. ++..++ |++++++.+++...
T Consensus 107 l~~~~~~l~~~~pGd~Vlv~~P~y~~~~-~~~~~~g~~~v~v~~~~~~~~~~--------------d~~~l~~~~~~~~~ 171 (396)
T PRK09257 107 LRVGADFLKRAFPDAKVWVSDPTWPNHR-AIFEAAGLEVKTYPYYDAATKGL--------------DFDAMLADLSQAPA 171 (396)
T ss_pred HHHHHHHHHHhCCCCeEEECCCCcccHH-HHHHHcCCcEEEEeccccccCcc--------------CHHHHHHHHHhCCC
Confidence 9999875323356788999999998854 344445554433222 111121 78999998875433
Q ss_pred CeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cc-cc-cchh-hccCCCCch---hhhhhhcC-
Q 011856 246 EIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RL-AY-GGAQ-EYFGVTPDL---TTLGKIIG- 317 (476)
Q Consensus 246 ~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~-g~-~~~~-~~~g~~pDi---~t~sK~lg- 317 (476)
...++++...+|++|.+.+.++ +++|.++|++||+++|+||+|.+| .. +. .... ...+..+++ .+|||.++
T Consensus 172 ~~~~~i~~~p~NPTG~~~s~~~-~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~ 250 (396)
T PRK09257 172 GDVVLLHGCCHNPTGADLTPEQ-WDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLELLVASSFSKNFGL 250 (396)
T ss_pred CCEEEEeCCCCCCCCCCCCHHH-HHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhcCCcEEEEEEcCCcCcc
Confidence 4455565666677888776555 999999999999999999999887 32 11 1111 111112233 37999999
Q ss_pred CCCcEEEEEe---cHHH----HHhhcCCCCccccCCCCCcHHHHHHHHHHHHHh------cC--CCHHHHHHHHHHHHHH
Q 011856 318 GGLPVGAYGG---RRDI----MEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRL------KE--PGTYEYLNKITGELTQ 382 (476)
Q Consensus 318 ~G~~iG~~~~---~~~i----~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~------~~--~~~~~~~~~~~~~l~~ 382 (476)
.|||+||+++ +++. ++.+.. .......+.+++.+.++.+.|+.- .+ ++.+++++++.+.+.+
T Consensus 251 ~GlRiG~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~rr~~l~~ 327 (396)
T PRK09257 251 YGERVGALSVVAEDAEEADRVLSQLKA---TIRTNYSNPPAHGAAIVATILNDPELRAEWEAELEEMRERIKAMRQLLVE 327 (396)
T ss_pred ccccceeEEEEeCCHHHHHHHHHHHHH---HhhhhcCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5999999973 4443 333321 111223344677777766666421 11 2344555555666666
Q ss_pred HHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCCcceEEeCC-CcHHHHH
Q 011856 383 GIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFTSLA-HSSDDIQ 461 (476)
Q Consensus 383 ~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~~~~-~t~e~i~ 461 (476)
.|++......+....+..|.++|+.+.. ..+.+.+.++||++.|.+ |+++. .++++++
T Consensus 328 ~L~~~~~~~~~~~~~p~gg~~~w~~l~~-----------------~~~~~l~~~~~V~~~p~~----ri~~~~~~~~~i~ 386 (396)
T PRK09257 328 ALKAKGPSRDFDFIARQRGMFSYSGLTP-----------------EQVDRLREEFGVYAVGSG----RINVAGLNESNID 386 (396)
T ss_pred HHHhcCCCCCcccccccceEEEecCCCH-----------------HHHHHHHHcCCEEEcCCC----eEEEeeCCHHHHH
Confidence 6655421101222234456666765521 233344467799998753 77765 7999999
Q ss_pred HHHHHHHHHH
Q 011856 462 HTITAAEKVK 471 (476)
Q Consensus 462 ~~~~~l~~~~ 471 (476)
+++++|++++
T Consensus 387 ~~~~~i~~~~ 396 (396)
T PRK09257 387 YVAEAIAAVL 396 (396)
T ss_pred HHHHHHHhhC
Confidence 9999998753
No 177
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.92 E-value=7e-23 Score=203.03 Aligned_cols=322 Identities=15% Similarity=0.106 Sum_probs=198.6
Q ss_pred CEEEecccChhhccCCCCcHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHHHh
Q 011856 99 NEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARA 177 (476)
Q Consensus 99 ~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~~~~~~~~~~la~~l~~~~~-~~e~v~~~~sGseA~~~al~~ar~ 177 (476)
..++||..+. ++++ .++.+.+++.+.+.....| +.....+|.+.+++++. ++++|++++|+++++..+++.
T Consensus 22 ~~~i~l~~~~--n~~~-~~~~~~~a~~~~~~~~~~Y--~~~~~~~Lr~aia~~~~v~~~~I~it~G~~~~i~~~~~~--- 93 (360)
T PRK07392 22 DAILDFSASI--NPLG-PPESVIAAIQSALSALRHY--PDPDYRELRLALAQHHQLPPEWILPGNGAAELLTWAGRE--- 93 (360)
T ss_pred ccEEEeCCcC--CCCC-CCHHHHHHHHHHHHHhhcC--CCcCHHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHHH---
Confidence 3678888664 5555 6789999988877653333 33224567777777765 678999999999999998883
Q ss_pred ccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCC
Q 011856 178 FTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVG 257 (476)
Q Consensus 178 ~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~ 257 (476)
+..++.|++.+++|.++. ..+...|..+...+.....+.. ....+++.+++.. . ..+++++...+|
T Consensus 94 l~~g~~vlv~~P~y~~~~-~~~~~~g~~~~~v~~~~~~~~~---------~~~~~~~~~~~~~---~-~~~~~~l~nP~N 159 (360)
T PRK07392 94 LAQLRAVYLITPAFGDYR-RALRAFGATVKELPLPLDQPSP---------GLTLRLQTLPPQL---T-PNDGLLLNNPHN 159 (360)
T ss_pred hCCCCeEEEECCCcHHHH-HHHHHcCCeEEEEecccccCCc---------ccccCHHHHHHhc---c-CCCEEEEeCCCC
Confidence 445578999999998754 3344455544332221111110 0001455554432 2 345555544466
Q ss_pred CCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccccc-chhhccCCCCchh---hhhhhcC-CCCcEEEEEecHHH
Q 011856 258 NSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG-GAQEYFGVTPDLT---TLGKIIG-GGLPVGAYGGRRDI 331 (476)
Q Consensus 258 ~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~-~~~~~~g~~pDi~---t~sK~lg-~G~~iG~~~~~~~i 331 (476)
++|.+.+ .++|.++++++++ +|+||+|.+| ..+.. ......+..+.++ +|||.++ +|+|+||+++++++
T Consensus 160 PTG~~~~----~~~l~~l~~~~~~-~IiDE~y~~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~~~~~ 234 (360)
T PRK07392 160 PTGKLWS----REAILPLLEQFAL-VVVDEAFMDFLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIAHPDR 234 (360)
T ss_pred CCCCCcC----HHHHHHHHHHCCE-EEEECchhhhccCccccchHHHhhcCCCEEEEEechhhhcCCchheeeeeCCHHH
Confidence 7888887 5678888999985 6669999988 54421 1111122223333 7999999 99999999999999
Q ss_pred HHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEec
Q 011856 332 MEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTE 410 (476)
Q Consensus 332 ~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~ 410 (476)
++.+... ...++.+.+++.++.++|+.-.- +...+.++++.+++.+.|++ ++.....++.|.++++.+..
T Consensus 235 ~~~~~~~-----~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~----~~~~~~~~~~~~fl~~~~~~ 305 (360)
T PRK07392 235 LQRWQQW-----RDPWPVNGLAAAAAIAALADRDFQQQTWAWLPPAREALFQGLAS----LPGLTPLPSAANFLLVQSQG 305 (360)
T ss_pred HHHHHhh-----CCCCCCCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHh----CCCcEECCCCCCEEEEEcCC
Confidence 8887631 12467788999988888752110 12223344444445554443 32222234567777766531
Q ss_pred CCCcCchhhcccchHHHHHHHHHHH-HCCeEeccCC------CcceEEeCCCcHHHHHHHHHHHHHHHH
Q 011856 411 GPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEKVKM 472 (476)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~------~~~~~~~~~~t~e~i~~~~~~l~~~~~ 472 (476)
...++.+.++ ++||.+.++. .+++|+++.. .++.+++.+.|+++++
T Consensus 306 ---------------~~~~l~~~ll~~~gv~v~pg~~f~~~~~~~iRi~~~~-~~~~~~l~~al~~~~~ 358 (360)
T PRK07392 306 ---------------SALQLQEKLLQQHRILIRDCLSFPELGDRYFRVAVRT-EAENQRLLEALAAILA 358 (360)
T ss_pred ---------------CHHHHHHHHHhhCCEEEEeCCCCCCCCCCEEEEEeCC-HHHHHHHHHHHHHHhh
Confidence 1246777754 6799998873 1357787665 3445666666666543
No 178
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=1.6e-23 Score=205.09 Aligned_cols=319 Identities=11% Similarity=0.102 Sum_probs=202.7
Q ss_pred eecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCC----CCCeEEEeC
Q 011856 87 SVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP----SIEMVRFVN 162 (476)
Q Consensus 87 ~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~~~~~~~~~~la~~l~~~~~----~~e~v~~~~ 162 (476)
+++|.+.+...|+..+|+..|. +.++ .+|.+.+++.+.+.......|+.....+|.+.+++++. ++++|++++
T Consensus 7 ~~~~~~~~~~~~~~~i~l~~~~--~~~~-~p~~~~~~~~~~~~~~~~~~Y~~~~~~~Lr~aia~~~~~~~~~~~~i~it~ 83 (335)
T PRK14808 7 IAKRAYPYETEKRDRTYLALNE--NPFP-FPEDLVDEVFRRLNSDTLRIYYDSPDEELIEKILSYLDTDFLSKNNVSVGN 83 (335)
T ss_pred hhccCcCCCCCCCceeEecCCC--CCCC-CCHHHHHHHHHHhhhhhhhcCCCCChHHHHHHHHHHhCCCCCCcceEEEcC
Confidence 4566666667888999998874 4555 58889999988775432122333344566666666553 478999999
Q ss_pred CHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhc
Q 011856 163 SGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFEN 242 (476)
Q Consensus 163 sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~ 242 (476)
|+++++..+++. + +.|++.+++|.++.. .....|..+...+. .... .++.. .+.
T Consensus 84 Ga~~~i~~~~~~---~---d~v~v~~P~y~~~~~-~~~~~g~~~~~v~~--~~~~--------------~~~~~--~~~- 137 (335)
T PRK14808 84 GADEIIYVMMLM---F---DRSVFFPPTYSCYRI-FAKAVGAKFLEVPL--TKDL--------------RIPEV--NVG- 137 (335)
T ss_pred CHHHHHHHHHHH---h---CcEEECCCCHHHHHH-HHHHcCCeEEEecC--CCcC--------------CCChh--Hcc-
Confidence 999999999983 3 568888888877443 33334443322211 1110 01111 122
Q ss_pred CCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCccccccchhhccCCCCch---hhhhhhcC-C
Q 011856 243 NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDL---TTLGKIIG-G 318 (476)
Q Consensus 243 ~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pDi---~t~sK~lg-~ 318 (476)
..+++++...+|++|.+.+ .+++.+|+ +++++||+||+|..|...... ......+++ .+|||.++ +
T Consensus 138 ---~~~~i~i~nP~NPTG~~~s----~~~l~~l~-~~~~~ii~DE~Y~~f~~~~~~--~~~~~~~~vi~~~S~SK~~~l~ 207 (335)
T PRK14808 138 ---EGDVVFIPNPNNPTGHVFE----REEIERIL-KTGAFVALDEAYYEFHGESYV--DLLKKYENLAVIRTFSKAFSLA 207 (335)
T ss_pred ---CCCEEEEeCCCCCCCCCcC----HHHHHHHH-hcCCEEEEECchhhhcCCchH--HHHHhCCCEEEEEechhhccCc
Confidence 2355555555566788877 44555666 589999999999887211111 111112233 37999999 8
Q ss_pred CCcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHhhhcCCceEe
Q 011856 319 GLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICG 397 (476)
Q Consensus 319 G~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v 397 (476)
|+|+||+++++++++.+.... .+++.+.+++.++.++++..+. .+..+.++++.+.+.+.|++ .++ ...
T Consensus 208 GlRvG~~v~~~~~~~~l~~~~-----~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~----~g~-~~~ 277 (335)
T PRK14808 208 AQRIGYVVSSEKFIDAYNRVR-----LPFNVSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALRE----MGY-RIT 277 (335)
T ss_pred ccceEEEEeCHHHHHHHHHhc-----CCCCCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHH----CCC-EEC
Confidence 999999999999999886321 2456678888888888763211 22233444444455555544 342 223
Q ss_pred eeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCCcceEEeCCCcHHHHHHHHHHHHHH
Q 011856 398 GYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHTITAAEKV 470 (476)
Q Consensus 398 ~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~~~~~t~e~i~~~~~~l~~~ 470 (476)
++.|.|+++.+... ...++.+.|.++||+++... ..+|+++. +.+++++++++|++.
T Consensus 278 ~~~g~f~~~~l~~~--------------~~~~~~~~l~~~Gi~V~~~~-~~~Risi~-~~~~~~~~~~~l~~~ 334 (335)
T PRK14808 278 DSRGNFVFIFMEKE--------------EKERLLEHLRAKNIAVRSFR-EGVRITIG-KREENDMILKELEVF 334 (335)
T ss_pred CCCCeEEEEeCCCc--------------cHHHHHHHHHHCCeEEEECC-CCeEEecC-CHHHHHHHHHHHHhh
Confidence 46788888877421 12567889999999998753 56788754 678899999998753
No 179
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.92 E-value=6.3e-23 Score=203.74 Aligned_cols=314 Identities=14% Similarity=0.089 Sum_probs=199.1
Q ss_pred CEEEecccChhhccCCCCcHHHHHHHHHHHHhcCCCC---CCCHHHHHHHHHHHhhCC----CCCeEEEeCCHHHHHHHH
Q 011856 99 NEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFG---APCLLENVLAEMVISAVP----SIEMVRFVNSGTEACMGV 171 (476)
Q Consensus 99 ~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~~---~~~~~~~~la~~l~~~~~----~~e~v~~~~sGseA~~~a 171 (476)
..++||..+ ++....++.+.+++.+.... ..|. +..+++..+++++.+..+ .+++|++++|+++++..+
T Consensus 27 ~~~i~l~~~---~p~~~~~~~~~~~~~~~~~~-~~Y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~~I~it~G~~~~i~~~ 102 (364)
T PRK07865 27 DGIVDLSVG---TPVDPVPPVIQEALAAAADA-PGYPTTAGTPELREAIVGWLARRRGVTGLDPAAVLPVIGSKELVAWL 102 (364)
T ss_pred CCEEEcCCC---CCCCCCCHHHHHHHHHHHhh-CCCCCccCCHHHHHHHHHHHHHHcCCCCCCcccEEEccChHHHHHHH
Confidence 346777777 44443468888888765543 2232 224677788888876542 468999999999999887
Q ss_pred HHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEE
Q 011856 172 LRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAII 251 (476)
Q Consensus 172 l~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi 251 (476)
+.+. ....++.|++.+++|.+.... ....|.. +..+ +++++++. .++++|+
T Consensus 103 ~~~l-~~~~gd~Vl~~~p~y~~~~~~-~~~~g~~-------------------~~~~--~~~~~l~~------~~~~~v~ 153 (364)
T PRK07865 103 PTLL-GLGPGDVVVIPELAYPTYEVG-ARLAGAT-------------------VVRA--DSLTELGP------QRPALIW 153 (364)
T ss_pred HHHH-cCCCCCEEEECCCCcccHHHH-HHhcCCE-------------------EEec--CChhhCCc------ccceEEE
Confidence 6632 134567788888888764332 2222321 1222 23333322 2567777
Q ss_pred EcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccc-hhhc--cCCC-Cch---hhhhhhcC-CCCcE
Q 011856 252 LEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGG-AQEY--FGVT-PDL---TTLGKIIG-GGLPV 322 (476)
Q Consensus 252 ~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~-~~~~--~g~~-pDi---~t~sK~lg-~G~~i 322 (476)
+++.+|++|.+.+.++ +++|.++|++||++||+||+|.+| ..+... .... .+.. ..+ .+|||.++ .|+|+
T Consensus 154 ~~~p~NPtG~~~~~~~-~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRi 232 (364)
T PRK07865 154 LNSPSNPTGRVLGVDH-LRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTGLLAVHSLSKQSNLAGYRA 232 (364)
T ss_pred EcCCCCCCCccCCHHH-HHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCccceEEEEeechhccCCCceee
Confidence 7766777888887655 999999999999999999999877 433211 1111 0111 122 27999997 79999
Q ss_pred EEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeec
Q 011856 323 GAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYIS 401 (476)
Q Consensus 323 G~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g 401 (476)
||+++++++++.+.. ......++.+++.+.++.++|+..+. ++.++.++++.+.+.+.|++ +++....+..|
T Consensus 233 G~i~~~~~~~~~~~~---~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~----~g~~~~~~~~~ 305 (364)
T PRK07865 233 GFVAGDPALVAELLE---VRKHAGMMVPAPVQAAMVAALGDDAHVREQRERYARRRAVLRPALEA----AGFRVDHSEAG 305 (364)
T ss_pred EEEecCHHHHHHHHH---HHHhcCCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH----cCCcccCCCcc
Confidence 999999999888763 11223456678888887776642110 22333444444445554444 34322223345
Q ss_pred eeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCC------CcceEEeCCCcHHHHHHHHHHHH
Q 011856 402 GMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAE 468 (476)
Q Consensus 402 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~------~~~~~~~~~~t~e~i~~~~~~l~ 468 (476)
.++++.+.. + ..++.+.|.++||++.|+. .+.+|+++..+++++++++++|+
T Consensus 306 ~~~~~~~~~------------~---~~~~~~~l~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~~~~~~~~l~ 363 (364)
T PRK07865 306 LYLWATRGE------------D---CWDTVAWLAERGILVAPGDFYGPAGAQHVRVALTATDERIAAAVERLA 363 (364)
T ss_pred EEEEEeCCC------------C---HHHHHHHHHHCCEEEeCccccCcCCCCEEEEEecCCHHHHHHHHHHhh
Confidence 566665521 1 1456778889999998853 23578888778999999999885
No 180
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.92 E-value=9.9e-23 Score=209.06 Aligned_cols=332 Identities=13% Similarity=0.074 Sum_probs=200.4
Q ss_pred cHHHHHHHHHHHHhc---C-CCC---CCCHHHHHHHHHHHhhCC---CCCeEEEeCCHHHHHHHHHHHHHhc-cCCceEE
Q 011856 117 DDQVLAALGETMKKG---T-SFG---APCLLENVLAEMVISAVP---SIEMVRFVNSGTEACMGVLRLARAF-TGRERII 185 (476)
Q Consensus 117 ~p~v~~a~~~~l~~~---~-~~~---~~~~~~~~la~~l~~~~~---~~e~v~~~~sGseA~~~al~~ar~~-~~~~~ii 185 (476)
+..+.+++.+.++.. . .|+ +..++++++++++.+..+ .+++|++|+|+++|+..+++.. . ..++.|+
T Consensus 90 P~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l--~~~~gD~Vl 167 (481)
T PTZ00377 90 PADVVARAKEYLNAIGGGTGAYTDSAGYPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLL--IGDPSDGVM 167 (481)
T ss_pred CHHHHHHHHHHHHhCCCcccCcCcccCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHh--ccCCCCEEE
Confidence 457777777666542 1 122 234677778877776533 5789999999999999999842 2 3567788
Q ss_pred EEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcC---CCCeEEEEEcccCCCCCcc
Q 011856 186 KFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN---KGEIAAIILEPVVGNSGFI 262 (476)
Q Consensus 186 ~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~---~~~~a~vi~ep~~~~~G~i 262 (476)
+.+++|.++.. .+...|..+..++.....++. -|+++|++.++.. ..+++++++...+|++|.+
T Consensus 168 v~~P~y~~y~~-~~~~~g~~~v~v~~~~~~~~~------------~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~ 234 (481)
T PTZ00377 168 IPIPQYPLYSA-AITLLGGKQVPYYLDEEKGWS------------LDQEELEEAYEQAVRNGITPRALVVINPGNPTGQV 234 (481)
T ss_pred ECCCCchhHHH-HHHHcCCEEEEEEeccccCCC------------CCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcC
Confidence 88888887543 333444433322221111110 1789999988631 1246654444446678887
Q ss_pred cCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccc-ccc-hh-hc-cCCCC------chh---hhhhhc-C-CCCcEEEEE
Q 011856 263 APKPDFLNAIRRITKENGALLIFDEVMTGF-RLA-YGG-AQ-EY-FGVTP------DLT---TLGKII-G-GGLPVGAYG 326 (476)
Q Consensus 263 ~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g-~~~-~~-~~-~g~~p------Di~---t~sK~l-g-~G~~iG~~~ 326 (476)
.+.++ +++|.++|++||++||+||+|..+ ..+ ..+ .. .. .++.+ .++ +|||.+ + +|||+||++
T Consensus 235 ~s~e~-~~~i~~~a~~~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~ 313 (481)
T PTZ00377 235 LTRDV-MEEIIKFCYEKGIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFE 313 (481)
T ss_pred CCHHH-HHHHHHHHHHCCCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEEEE
Confidence 76555 999999999999999999999877 422 111 11 10 11211 233 699985 6 799999998
Q ss_pred e---cHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC-----CCHHHH-------HHHHHHHHHHHHHHHhhhc
Q 011856 327 G---RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-----PGTYEY-------LNKITGELTQGIIDAGKKA 391 (476)
Q Consensus 327 ~---~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-----~~~~~~-------~~~~~~~l~~~L~~~~~~~ 391 (476)
+ ++++++.+... . ...++.|.+++.++.++|+.... +.+.++ ++++.+.+.+.|++ +
T Consensus 314 ~~~~p~~li~~l~~~---~-~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~----~ 385 (481)
T PTZ00377 314 LTNIPPEVREQIYKL---A-SINLCSNVVGQLMTGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNK----I 385 (481)
T ss_pred EeCCCHHHHHHHHHH---h-heecCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhc----C
Confidence 6 89998888632 1 12346788899998888852111 112222 33444444444443 3
Q ss_pred CCceEeee-eceeEEEEEecCC-CcCchhhcccchHHHHHH-HHHHHHCCeEeccCC-------CcceEEeCCCcHHHHH
Q 011856 392 GHAICGGY-ISGMFGFFFTEGP-VYNFEDAKKSETTKFARF-YRGMLEEGVYFAPSQ-------FEAGFTSLAHSSDDIQ 461 (476)
Q Consensus 392 ~~~~~v~~-~g~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~-~~~l~~~Gv~~~~~~-------~~~~~~~~~~t~e~i~ 461 (476)
+....... .|.++++.+..+. .... ....... ....+ ...|.++||.+.|+. .+++|+++..++++++
T Consensus 386 ~g~~~~~p~gg~fl~~~~~l~~~~~~~-~~~~~~~-~~~~~~~~ll~~~gV~v~pG~~F~~~~~~~~~Rls~~~~~e~l~ 463 (481)
T PTZ00377 386 EGVSCQPVEGAMYAFPRIELPEKAIQE-AKERGLA-PDVLYCLELLESTGIVVVPGSGFGQKPGTYHFRITILPPEEQIE 463 (481)
T ss_pred CCcEeecCCeeEEEEeeccCchhhHHH-HHhcCCC-cHHHHHHHHHHHcCEEEeCCcccCCCCCCCEEEEEECCCHHHHH
Confidence 22222333 4556665543110 0000 0000000 01233 355567899998863 1258888888889999
Q ss_pred HHHHHHHHHHHHh
Q 011856 462 HTITAAEKVKMRF 474 (476)
Q Consensus 462 ~~~~~l~~~~~~~ 474 (476)
+++++|.+++++.
T Consensus 464 ~~l~rl~~~~~~~ 476 (481)
T PTZ00377 464 EMVKKIKEFHESF 476 (481)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999988754
No 181
>PLN02672 methionine S-methyltransferase
Probab=99.92 E-value=1.1e-22 Score=218.29 Aligned_cols=352 Identities=11% Similarity=0.057 Sum_probs=216.2
Q ss_pred EEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCC-CC---CeEEEeCCHHHHH
Q 011856 93 MWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SI---EMVRFVNSGTEAC 168 (476)
Q Consensus 93 ~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~~~~~~~~~~la~~l~~~~~-~~---e~v~~~~sGseA~ 168 (476)
+.+.+|..+|++..|. +.++ .+|.+.+++.+.+.+........++..++++++++.++ .. ++|++++|+++++
T Consensus 691 ~~~~~g~~vI~LsinE--~d~p-pPp~V~eAi~eal~~~~~s~g~pdlr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~elL 767 (1082)
T PLN02672 691 VSGSQESSLIHMDVDE--SFLP-VPSAVKASIFESFVRQNISESETDPRPSILQFIKSNYGFPTDSCTEFVYGDTSLALF 767 (1082)
T ss_pred CcccCCCCEEEEeCCC--CCCC-CCHHHHHHHHHHHhhcCCCCCChHHHHHHHHHHHHHhCcCCCCCCEEEEeCCHHHHH
Confidence 4555678899998884 4444 78999999998876643322345678899999998865 22 4899999999888
Q ss_pred HHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeE
Q 011856 169 MGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIA 248 (476)
Q Consensus 169 ~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a 248 (476)
..+++. ...+++.|++..++|..+. ......|..+..++.....++. -|++.|++.+++. ....
T Consensus 768 ~lll~a--Ll~pGD~VLVp~PtY~~Y~-~~a~~~Ga~vv~Vpl~~e~gf~------------lD~d~Le~al~~~-~~~~ 831 (1082)
T PLN02672 768 NKLVLC--CVQEGGTLCFPAGSNGTYV-SAAKFLKANFRRIPTKSSDGFK------------LTAKTLASTLETV-KKPW 831 (1082)
T ss_pred HHHHHH--HcCCCCEEEEeCCChHHHH-HHHHHcCCEEEEEecccccCCC------------CCHHHHHHHhccC-CCCE
Confidence 888873 1234577888888887643 4444455544433221111210 1788999998642 1346
Q ss_pred EEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccc---hh----hccC-CCC--chh---hhhh
Q 011856 249 AIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGG---AQ----EYFG-VTP--DLT---TLGK 314 (476)
Q Consensus 249 ~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~---~~----~~~g-~~p--Di~---t~sK 314 (476)
+++++|++|++|.+.+.++ +++|.++|++||++||+||+|.++ ..+... .. ..++ ..+ .++ +|||
T Consensus 832 I~L~nPnhNPTG~v~S~ee-Le~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSK 910 (1082)
T PLN02672 832 VYISGPTINPTGLLYSNSE-IEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLST 910 (1082)
T ss_pred EEEECcCCCCcCccCCHHH-HHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHH
Confidence 7778887677888776555 999999999999999999999887 543211 00 0111 112 222 7999
Q ss_pred hcC-CCCcEEEEEec-HHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCH-------HHHHHHHHHHHHHHHH
Q 011856 315 IIG-GGLPVGAYGGR-RDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGT-------YEYLNKITGELTQGII 385 (476)
Q Consensus 315 ~lg-~G~~iG~~~~~-~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~-------~~~~~~~~~~l~~~L~ 385 (476)
.++ +|||+||++++ +++++.+..... ....+..+..++++++++++. +..++ ++.++++.+++.+.|+
T Consensus 911 kf~lpGLRIGylIap~~eLi~~l~~~~~--~s~~~~~~q~Aaaaalall~~-~~~~~~~~l~e~r~~Lk~rRd~L~e~L~ 987 (1082)
T PLN02672 911 ELLSGGHEFGFLALNDSVLIDAFHSAPG--LSRPHSTLKYTIKKLLGLKNQ-KSSDLLDGVAEQKKILKSRAERLKETLE 987 (1082)
T ss_pred hhccHHHHheeEEeCCHHHHHHHHHhhh--hcCCCcHHHHHHHHHHHHHhc-cCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999 79999999986 458888763111 111122233343333333310 11222 3334455555555554
Q ss_pred HHhhhcCCceEeeee-ceeEEEEEecCCCcCchhhcccc-----hHHHHHHHHHHHHC-CeEeccCCC----cceEEeCC
Q 011856 386 DAGKKAGHAICGGYI-SGMFGFFFTEGPVYNFEDAKKSE-----TTKFARFYRGMLEE-GVYFAPSQF----EAGFTSLA 454 (476)
Q Consensus 386 ~~~~~~~~~~~v~~~-g~~~~i~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~-Gv~~~~~~~----~~~~~~~~ 454 (476)
+ +++. ..++. |.++|+.+...... ......++ .....++++.|+++ ||.+.|+.. +.+|++++
T Consensus 988 ~----~Gi~-v~~PeGGFfLwl~l~~~l~~-~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~FG~~g~~RIsfa 1061 (1082)
T PLN02672 988 A----CGWD-VLEPQGGISMVAKPSAYLGK-TVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWTGIPGYCRFSFA 1061 (1082)
T ss_pred H----CCCe-EecCCcEEEEEEEccccccc-cccccccccccccCCCHHHHHHHHHHcCCEEEecCcccCCCCeEEEEec
Confidence 4 3433 23444 44555544210000 00000000 01235788888865 999998742 46789999
Q ss_pred CcHHHHHHHHHHHHHHHHH
Q 011856 455 HSSDDIQHTITAAEKVKMR 473 (476)
Q Consensus 455 ~t~e~i~~~~~~l~~~~~~ 473 (476)
.+++++++++++|+++.+-
T Consensus 1062 ~~~e~LeeALerL~kf~~~ 1080 (1082)
T PLN02672 1062 LEDSEFDRALKAIARFKEL 1080 (1082)
T ss_pred CCHHHHHHHHHHHHHHHHh
Confidence 8999999999999987653
No 182
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.92 E-value=2.8e-23 Score=203.20 Aligned_cols=302 Identities=18% Similarity=0.154 Sum_probs=195.8
Q ss_pred CEEEecccChhhccCCCCcHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHHHh
Q 011856 99 NEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARA 177 (476)
Q Consensus 99 ~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~~~~~~~~~~la~~l~~~~~-~~e~v~~~~sGseA~~~al~~ar~ 177 (476)
.+.+||..|+ +.++. | ..+... ... ..|++....++.+.++++++ .++++++++|+++++..+.+ .
T Consensus 17 ~~~~~~~~~~--~~~~~--~-~~~~~~---~~~--~~y~~~~~~~lr~~la~~~~~~~~~i~~t~G~~~~i~~~~~---~ 83 (330)
T TIGR01140 17 EDWLDFSTGI--NPLGP--P-VPPIPA---SAW--ARYPDPEYDELRAAAAAYYGLPAASVLPVNGAQEAIYLLPR---L 83 (330)
T ss_pred hheeEccccC--CCCCC--C-hhhcch---HHH--hhCCCccHHHHHHHHHHHhCCChhhEEECCCHHHHHHHHHH---H
Confidence 3468888876 44443 3 222111 111 12333334788888888876 46899999999999988665 3
Q ss_pred ccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCC
Q 011856 178 FTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVG 257 (476)
Q Consensus 178 ~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~ 257 (476)
+.++ +|++.+++|+.+... +...|. ++..++ |++.+++.+++ ..+++++.| +|
T Consensus 84 l~~g-~vl~~~p~y~~~~~~-~~~~g~-------------------~~~~~~--d~~~l~~~~~~---~~~v~i~~p-~N 136 (330)
T TIGR01140 84 LAPG-RVLVLAPTYSEYARA-WRAAGH-------------------EVVELP--DLDRLPAALEE---LDVLVLCNP-NN 136 (330)
T ss_pred hCCC-eEEEeCCCcHHHHHH-HHHcCC-------------------EEEEeC--CHHHHHhhccc---CCEEEEeCC-CC
Confidence 3444 788888888775332 222222 234444 88999888842 224445555 56
Q ss_pred CCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccchhhccCCCCchh---hhhhhcC-CCCcEEEEEecHHHH
Q 011856 258 NSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLT---TLGKIIG-GGLPVGAYGGRRDIM 332 (476)
Q Consensus 258 ~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pDi~---t~sK~lg-~G~~iG~~~~~~~i~ 332 (476)
++|.+.+. +.+++|.++|++||+++|+||+|.+| ..... ....+..++++ +|||.+| +|+|+||++++++++
T Consensus 137 PtG~~~~~-~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~--~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~ 213 (330)
T TIGR01140 137 PTGRLIPP-ETLLALAARLRARGGWLVVDEAFIDFTPDASL--APQAARFPGLVVLRSLTKFFGLAGLRLGFVVAHPALL 213 (330)
T ss_pred CCCCCCCH-HHHHHHHHHhHhcCCEEEEECcccccCCccch--hhHhccCCCEEEEEecchhhcCchhhhhheeCCHHHH
Confidence 67777654 44999999999999999999999887 32111 11112123333 7999999 899999999999999
Q ss_pred HhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCC
Q 011856 333 EMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGP 412 (476)
Q Consensus 333 ~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~ 412 (476)
+.+... ...++.++++++++.+.++ ++++.++.+++.+..++.+.+...+++.....++.|.|+++.+.+
T Consensus 214 ~~l~~~-----~~~~~~s~~~q~~~~~~l~---~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~f~~~~~~~-- 283 (330)
T TIGR01140 214 ARLREA-----LGPWTVNGPARAAGRAALA---DTAWQAATRARLAAERARLAALLARLGGLEVVGGTALFLLVRTPD-- 283 (330)
T ss_pred HHHHhc-----CCCCCchHHHHHHHHHHHh---chHHHHHHHHHHHHHHHHHHHHHHhCCCceECCCCCeEEEEEcCC--
Confidence 888742 2345667888887777765 334444444444445555544444444333334567777776531
Q ss_pred CcCchhhcccchHHHHHHHHHHHHCCeEeccCCC------cceEEeCCCcHHHHHHHHHHHH
Q 011856 413 VYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF------EAGFTSLAHSSDDIQHTITAAE 468 (476)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~------~~~~~~~~~t~e~i~~~~~~l~ 468 (476)
..++.+.|+++||++.++.. +.+|+++....++ ++++.+|+
T Consensus 284 --------------~~~l~~~l~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~-~~~~~~l~ 330 (330)
T TIGR01140 284 --------------AAALHEALARRGILIRDFDNFPGLDPRYLRFALPTDEEN-DRLEEALA 330 (330)
T ss_pred --------------HHHHHHHHHHCCEEEEECCCCCCCCCCEEEEEecCHHHH-HHHHHhhC
Confidence 15788999999999998742 3578888776666 88877763
No 183
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.92 E-value=2e-23 Score=207.48 Aligned_cols=327 Identities=17% Similarity=0.197 Sum_probs=203.0
Q ss_pred EEEecccChhhccCCC-CcHHHHHHHHHHHH----hcCCCCC-CCHHHHHHHHHHHhhCC-------CCC-eEEEeCCHH
Q 011856 100 EYIDYVGSWGPAIIGH-ADDQVLAALGETMK----KGTSFGA-PCLLENVLAEMVISAVP-------SIE-MVRFVNSGT 165 (476)
Q Consensus 100 ~~iD~~~~~~~~~lG~-~~p~v~~a~~~~l~----~~~~~~~-~~~~~~~la~~l~~~~~-------~~e-~v~~~~sGs 165 (476)
++|||.+| ++.+. +++.+.+++.+..+ ......| +.....+|.+.+++++. +.+ .+++++|..
T Consensus 2 ~~I~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~ 78 (363)
T PF00155_consen 2 DVINLGSN---APLLLSQNPPPPAAIKAAIRGAATSSSFLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILVTSGAQ 78 (363)
T ss_dssp TEEESSSS---STSSTTSSHHHHHHHHHHHHHHHHHTGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHH
T ss_pred CEEEEECC---CCCCcccccchHHHHHHHHHHhhcccccccCCCchhhHHHHHHHHHHhhhccCcccccceEEEEecccc
Confidence 47888888 44443 56655555554433 2222333 33335555555555542 467 777777666
Q ss_pred HHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCC-
Q 011856 166 EACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK- 244 (476)
Q Consensus 166 eA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~- 244 (476)
+++..++.+.+ ..+++.|++.+++|.+. ...+...|..+...++....+ -+.|+++|++.+++.+
T Consensus 79 ~~~~~~~~~~~-~~~~~~vlv~~P~y~~~-~~~~~~~g~~~~~~~~~~~~~------------~~~d~~~l~~~l~~~~~ 144 (363)
T PF00155_consen 79 AALFLLLRLLK-INPGDTVLVPDPCYPSY-IEAARLLGAEVIPVPLDSEND------------FHLDPEALEEALDELPS 144 (363)
T ss_dssp HHHHHHHHHHH-SSTTSEEEEEESSSTHH-HHHHHHTTSEEEEEEEEETTT------------TEETHHHHHHHHHTSHT
T ss_pred cchhhhhhccc-ccccccceecCCccccc-cccccccCceeeecccccccc------------ccccccccccccccccc
Confidence 66666665421 44667788888888764 344444444322211100000 0338999999998642
Q ss_pred C--CeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccc-c-cch-hhccCCCCchh---hhhhhc
Q 011856 245 G--EIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLA-Y-GGA-QEYFGVTPDLT---TLGKII 316 (476)
Q Consensus 245 ~--~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g-~-~~~-~~~~g~~pDi~---t~sK~l 316 (476)
+ ++.+|+++.+++++|...+.++ +++|.++|++||+++|+||+|.++..+ . ... .....-.++++ +|||.+
T Consensus 145 ~~~~~~~v~~~~p~nPtG~~~~~~~-l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~ 223 (363)
T PF00155_consen 145 KGPRPKAVLICNPNNPTGSVLSLEE-LRELAELAREYNIIIIVDEAYSDLIFGDPDFGPIRSLLDEDDNVIVVGSLSKSF 223 (363)
T ss_dssp TTETEEEEEEESSBTTTTBB--HHH-HHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHHHGHHTTTSTEEEEEESTTTT
T ss_pred cccccceeeeccccccccccccccc-ccchhhhhcccccceeeeeceeccccCCCccCcccccccccccceeeeeccccc
Confidence 1 2467777766778888776555 999999999999999999999887332 2 111 22223334432 799999
Q ss_pred C-CCCcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC-----CCHHHHHHHHHHHHHHHHHHHhhh
Q 011856 317 G-GGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-----PGTYEYLNKITGELTQGIIDAGKK 390 (476)
Q Consensus 317 g-~G~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-----~~~~~~~~~~~~~l~~~L~~~~~~ 390 (476)
| .|+|+||+++++++++.++. ... .+..+.+.+.++.+.+..... ++..++++++.+++.+.|++.
T Consensus 224 g~~GlRvG~i~~~~~~~~~l~~---~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~--- 295 (363)
T PF00155_consen 224 GLPGLRVGYIVAPPELIERLRR---FQR--SGLSSSPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEI--- 295 (363)
T ss_dssp TSGGGTEEEEEEEHHHHHHHHH---HHH--HTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT---
T ss_pred cccccccccccchhhhhhhhhh---ccc--cccccchhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHh---
Confidence 9 79999999999999998873 222 223366777776666654331 334455555555555555543
Q ss_pred cCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHC-CeEeccCCC----cceEEeC-CCcHHHHHHHH
Q 011856 391 AGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEE-GVYFAPSQF----EAGFTSL-AHSSDDIQHTI 464 (476)
Q Consensus 391 ~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~~~----~~~~~~~-~~t~e~i~~~~ 464 (476)
++.......|.++++.+.. ....++.+.|+++ ||.+.|+.. ..+|+++ .++++++++++
T Consensus 296 -~~~~~~~~~~~~~~~~~~~--------------~~~~~l~~~L~~~~gi~v~pg~~~~~~~~iRi~~a~~~~e~~~~~~ 360 (363)
T PF00155_consen 296 -GITVLPPEAGFFLWVRLDP--------------NDAEELAQELLEEYGILVRPGSYFGVPGYIRISLASHSEEDLEEAL 360 (363)
T ss_dssp -TSEEEHHSBSSEEEEEESH--------------HHHHHHHHHHHHHHTEEEEEGGGGTSTTEEEEEGGCSCHHHHHHHH
T ss_pred -hhheeeccCccEEEEEccc--------------chHHHHHHHHHHhCCEEEEecCCCCCCCEEEEEeccCCHHHHHHHH
Confidence 4443333456666665532 1346788899988 999998642 3578888 88999999999
Q ss_pred HHH
Q 011856 465 TAA 467 (476)
Q Consensus 465 ~~l 467 (476)
++|
T Consensus 361 ~~l 363 (363)
T PF00155_consen 361 ERL 363 (363)
T ss_dssp HHH
T ss_pred hhC
Confidence 986
No 184
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.92 E-value=2.1e-22 Score=202.60 Aligned_cols=332 Identities=15% Similarity=0.160 Sum_probs=205.6
Q ss_pred EEEecccChhhccCCCCcHHHHHHHHHHHHhcCCCC---CCCHHHHHHHHHHHhhC-C-CCCeEEEeCCHHHHHHHHHHH
Q 011856 100 EYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFG---APCLLENVLAEMVISAV-P-SIEMVRFVNSGTEACMGVLRL 174 (476)
Q Consensus 100 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~~---~~~~~~~~la~~l~~~~-~-~~e~v~~~~sGseA~~~al~~ 174 (476)
.++||..+. ..++ .++.+.+++.+.......|+ +..+++.++++.+...- + +.++|++++|+++|+..+++.
T Consensus 31 ~~i~l~~~~--~~~~-~~~~~~~a~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~ 107 (397)
T PRK07568 31 KVYHLNIGQ--PDIK-TPEVFFEAIKNYDEEVLAYSHSQGIPELREAFAKYYKKWGIDVEPDEILITNGGSEAILFAMMA 107 (397)
T ss_pred CEEEecCCC--CCCC-CCHHHHHHHHHHhcCCcCcCCCCCCHHHHHHHHHHHHHhCCCCCcceEEEcCChHHHHHHHHHH
Confidence 456666663 2223 36788888876654322232 12355566666654221 2 578999999999999999884
Q ss_pred HHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcc
Q 011856 175 ARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEP 254 (476)
Q Consensus 175 ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep 254 (476)
. ...++.|++.+++|... .......|..+..++.....+. ...++++|++.++. ++++|++..
T Consensus 108 l--~~~gd~Vl~~~p~y~~~-~~~~~~~g~~~~~v~~~~~~g~-----------~~~~~~~l~~~~~~---~~~~v~i~~ 170 (397)
T PRK07568 108 I--CDPGDEILVPEPFYANY-NGFATSAGVKIVPVTTKIEEGF-----------HLPSKEEIEKLITP---KTKAILISN 170 (397)
T ss_pred h--cCCCCEEEEecCCCccH-HHHHHHcCCEEEEeecCcccCC-----------CCCCHHHHHHhcCc---cceEEEEEC
Confidence 2 34567788888877653 3333444443332221101111 01257888888863 455665544
Q ss_pred cCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccccc--chhhccCCCCchh---hhhhhcC-CCCcEEEEEe
Q 011856 255 VVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG--GAQEYFGVTPDLT---TLGKIIG-GGLPVGAYGG 327 (476)
Q Consensus 255 ~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~--~~~~~~g~~pDi~---t~sK~lg-~G~~iG~~~~ 327 (476)
.++++|.+.+.++ +++|.++|+++|+++|+||+|.+| ..+.. ......+..++++ +|||.++ .|+|+||+++
T Consensus 171 p~NPtG~~~~~~~-~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~~ 249 (397)
T PRK07568 171 PGNPTGVVYTKEE-LEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSACGARIGCLIS 249 (397)
T ss_pred CCCCCCccCCHHH-HHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEecchhhccCCCcceEEEec
Confidence 4566787776555 999999999999999999999988 54421 1111112223333 7999999 6999999988
Q ss_pred c-HHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHhhhcCCceEe-eeecee
Q 011856 328 R-RDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICG-GYISGM 403 (476)
Q Consensus 328 ~-~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v-~~~g~~ 403 (476)
+ +++++.+... .. .+++.+.+.+.++.++|+..+. +++.+.++++.+.+.+.|++ ++..... +..|.+
T Consensus 250 ~~~~~~~~~~~~---~~-~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~p~g~~~ 321 (397)
T PRK07568 250 KNKELIAAAMKL---CQ-ARLSPPTLEQIGAAALLDTPESYFDEVREEYKKRRDILYEELNK----IPGVVCEKPKGAFY 321 (397)
T ss_pred CCHHHHHHHHHH---hh-ccCCCCcHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHhc----CCCceecCCCcceE
Confidence 4 6787766421 11 2456778888888777753211 23344455555555555544 2222222 334455
Q ss_pred EEEEEecCCCcCchhhcccchHHHHHHHHHHHH------CCeEeccCC---------CcceEEeCCCcHHHHHHHHHHHH
Q 011856 404 FGFFFTEGPVYNFEDAKKSETTKFARFYRGMLE------EGVYFAPSQ---------FEAGFTSLAHSSDDIQHTITAAE 468 (476)
Q Consensus 404 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------~Gv~~~~~~---------~~~~~~~~~~t~e~i~~~~~~l~ 468 (476)
+++.+... ...++.+.|++ +||.+.|+. .+.+|+++..+++++++++++|+
T Consensus 322 ~~~~l~~~--------------~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls~~~~~~~~~~~~~~l~ 387 (397)
T PRK07568 322 IIAKLPVD--------------DAEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAYVLNEEDLKRAMEILK 387 (397)
T ss_pred EEEecCCC--------------CHHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEEEeCCHHHHHHHHHHHH
Confidence 67776321 12456667765 599998852 13678888888999999999999
Q ss_pred HHHHHh
Q 011856 469 KVKMRF 474 (476)
Q Consensus 469 ~~~~~~ 474 (476)
+++++.
T Consensus 388 ~~l~~~ 393 (397)
T PRK07568 388 EALEKY 393 (397)
T ss_pred HHHHHh
Confidence 988764
No 185
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=3.6e-23 Score=202.91 Aligned_cols=310 Identities=15% Similarity=0.142 Sum_probs=198.1
Q ss_pred CCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHH
Q 011856 97 DGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLA 175 (476)
Q Consensus 97 dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~~~~~~~~~~la~~l~~~~~-~~e~v~~~~sGseA~~~al~~a 175 (476)
.|..++||..|. ++++ .+|.+.+++.+.+.......|+.....+|.+.+++++. ++++|++++|+++++..+++.
T Consensus 16 ~~~~~i~l~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~g~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~~- 91 (337)
T PRK03967 16 EGNYRIWLDKNE--NPFD-LPEELKEEIFEELKRVPFNRYPHITSDPLREAIAEFYGLDAENIAVGNGSDELISYLVKL- 91 (337)
T ss_pred CCCceEEecCCC--CCCC-CCHHHHHHHHHHhhcCccccCCCCCHHHHHHHHHHHhCcCcceEEEcCCHHHHHHHHHHH-
Confidence 345668888774 4454 56889999988876422233455445677777777775 678999999999999887773
Q ss_pred HhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEccc
Q 011856 176 RAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPV 255 (476)
Q Consensus 176 r~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~ 255 (476)
+ .++.|++.+++|..+. ......|..+...+.....+ -|++++++.+. +++++++...
T Consensus 92 --~-~gd~V~v~~P~y~~~~-~~~~~~g~~~~~v~~~~~~~--------------~d~~~l~~~~~----~~~~v~~~~P 149 (337)
T PRK03967 92 --F-EGKHIVITPPTFGMYS-FYAKLNGIPVIDVPLKEDFT--------------IDGERIAEKAK----NASAVFICSP 149 (337)
T ss_pred --h-CCCeEEEeCCChHHHH-HHHHHcCCeEEEeecCCCCC--------------cCHHHHHHhcc----CCCEEEEeCC
Confidence 3 4678999998886432 23334444333222111011 16788877653 3344444444
Q ss_pred CCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCccccccchhhccCCCCchh---hhhhhcC-CCCcEEEEEecHHH
Q 011856 256 VGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLT---TLGKIIG-GGLPVGAYGGRRDI 331 (476)
Q Consensus 256 ~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pDi~---t~sK~lg-~G~~iG~~~~~~~i 331 (476)
+|++|.+.+ .++|.++++ +++++|+||+|.+|...... ...+..++++ +|||.++ +|+|+||+++++++
T Consensus 150 ~NPtG~~~~----~~~l~~i~~-~~~~ii~De~y~~~~~~~~~--~~~~~~~~vi~l~S~SK~~~l~GlRiG~iv~~~~~ 222 (337)
T PRK03967 150 NNPTGNLQP----EEEILKVLE-TGKPVVLDEAYAEFSGKSLI--GLIDEYPNLILLRTFSKAFGLAGIRAGYAIANEEI 222 (337)
T ss_pred CCCCCCCCC----HHHHHHHHh-cCCEEEEECchhhhcccchH--HHHhhCCCEEEEecchHhhcchhhhheeeecCHHH
Confidence 667888887 566777774 79999999999887211111 1112223433 7999999 89999999999999
Q ss_pred HHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEec
Q 011856 332 MEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTE 410 (476)
Q Consensus 332 ~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~ 410 (476)
++.+.... ..++.+.+++.++.++|+..+. .+..+++.+..+.+.+.|.+ .. .++.|.++++.+
T Consensus 223 i~~~~~~~-----~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~----~~----~~~~~~~~~~~~-- 287 (337)
T PRK03967 223 IDALYRIK-----PPFSLNILTMKIVRLALDHYDLIEERIDYIIKERERVRRELGE----YA----YPSDANFLLLKL-- 287 (337)
T ss_pred HHHHHhhc-----CCCCCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhcc----Cc----CCCCCcEEEEhH--
Confidence 98887421 2456678888888887752211 12222333333333333332 21 235566766543
Q ss_pred CCCcCchhhcccchHHHHHHHHHHHHCCeEeccCC---CcceEEeCCCcHHHHHHHHHHHHHHHHH
Q 011856 411 GPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ---FEAGFTSLAHSSDDIQHTITAAEKVKMR 473 (476)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~---~~~~~~~~~~t~e~i~~~~~~l~~~~~~ 473 (476)
.+.+.|+++||.+++.. .+.+|+++. +.++.++++++|+++.+.
T Consensus 288 ------------------~~~~~l~~~gi~v~~~~~~~~~~~Ri~~~-~~~~~~~l~~~l~~~~~~ 334 (337)
T PRK03967 288 ------------------DAYDYLLENGIVVRKLSGRLEGHIRVTVG-KREENDEFIKALKEIKEG 334 (337)
T ss_pred ------------------HHHHHHHHCCEEEEeCCCCCCCeEEEecC-CHHHHHHHHHHHHHHHHh
Confidence 25688889999997642 245788766 568888999999887653
No 186
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.92 E-value=1.1e-22 Score=201.34 Aligned_cols=314 Identities=15% Similarity=0.100 Sum_probs=201.0
Q ss_pred CCEEEecccChhhccCCCCcHHHHHHHHHHHHhcCCCC---CCCHHHHHHHHHHHhhCC----CCCeEEEeCCHHHHHHH
Q 011856 98 GNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFG---APCLLENVLAEMVISAVP----SIEMVRFVNSGTEACMG 170 (476)
Q Consensus 98 G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~~---~~~~~~~~la~~l~~~~~----~~e~v~~~~sGseA~~~ 170 (476)
+..++||.++ ++....++.+.+++.+.... ..|. +..+++.++++++.+.++ .+++|++++|+++++..
T Consensus 20 ~~~~i~l~~~---~p~~~~~~~~~~~~~~~~~~-~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~I~it~G~~~~i~~ 95 (357)
T TIGR03539 20 PDGIVDLSVG---TPVDPVPPLIRAALAAAADA-PGYPQTWGTPELREAIVDWLERRRGVPGLDPTAVLPVIGTKELVAW 95 (357)
T ss_pred CCCeEEccCC---CCCCCCCHHHHHHHHHHHhh-CCCCcccCCHHHHHHHHHHHHHhcCCCCCCcCeEEEccChHHHHHH
Confidence 4467888887 44444578888888776543 1222 234777888888876632 46899999999999998
Q ss_pred HHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEE
Q 011856 171 VLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAI 250 (476)
Q Consensus 171 al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~v 250 (476)
++++. ....++.|++.+++|.+.... +...|.. ++.+ ++++.++ . +++++|
T Consensus 96 ~~~~l-~~~~gd~Vl~~~p~y~~~~~~-~~~~g~~-------------------~~~v--~~~~~l~----~--~~~~~v 146 (357)
T TIGR03539 96 LPTLL-GLGPGDTVVIPELAYPTYEVG-ALLAGAT-------------------PVAA--DDPTELD----P--VGPDLI 146 (357)
T ss_pred HHHHH-cCCCCCEEEECCCCcHHHHHH-HHhcCCE-------------------Eecc--CChhhcC----c--cCccEE
Confidence 87742 134567888888888765432 2222321 1111 2333332 1 256777
Q ss_pred EEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccch-hhc--cCC-CCc-hh--hhhhhcC-CCCc
Q 011856 251 ILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGA-QEY--FGV-TPD-LT--TLGKIIG-GGLP 321 (476)
Q Consensus 251 i~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~-~~~--~g~-~pD-i~--t~sK~lg-~G~~ 321 (476)
+++..+|++|.+.+.++ +++|.++|++||+++|+||+|.+| ..+.... ... .+. ... ++ +|||.++ +|+|
T Consensus 147 ~~~~p~NPtG~~~~~~~-~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~R 225 (357)
T TIGR03539 147 WLNSPGNPTGRVLSVDE-LRAIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAGYR 225 (357)
T ss_pred EEeCCCCCcCccCCHHH-HHHHHHHHHHcCeEEEEecchhhhccCCCCccceecccCCCccccEEEEeccccccCCCcee
Confidence 77777777888877655 999999999999999999999877 3332111 110 010 112 22 7999997 8999
Q ss_pred EEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeee
Q 011856 322 VGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYI 400 (476)
Q Consensus 322 iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~ 400 (476)
+||+++++++++.+.. ......++.+.+++.++.++|+.-.. ....++++++.+++.+.|++ .++....+..
T Consensus 226 ~G~~i~~~~~~~~~~~---~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~----~g~~~~~p~~ 298 (357)
T TIGR03539 226 AGFVAGDPALVAELLT---VRKHAGLMVPAPVQAAMVAALGDDGHVAEQKARYAARRAQLKPALEK----AGFRIDHSEA 298 (357)
T ss_pred EEEEecCHHHHHHHHH---HHhhcccCCCHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHH----cCCCCcCCCc
Confidence 9999999999887753 22223456788888887777642110 22334444555555555544 3322222334
Q ss_pred ceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCC------CcceEEeCCCcHHHHHHHHHHH
Q 011856 401 SGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAA 467 (476)
Q Consensus 401 g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~------~~~~~~~~~~t~e~i~~~~~~l 467 (476)
|.++++.+.. ...++.+.|.++||.+.|+. .+.+|+++..+++++++++++|
T Consensus 299 ~~~~~~~~~~---------------~~~~~~~~l~~~gV~v~pg~~f~~~~~~~iRis~~~~~~~i~~~~~~l 356 (357)
T TIGR03539 299 GLYLWATRGE---------------DAWDTVDRLAELGILVAPGDFYGPAGSQHVRVALTATDERIAAAVARL 356 (357)
T ss_pred cEEEEEECCC---------------CHHHHHHHHHhCCEEECCccccCCCCCCeEEEEecCCHHHHHHHHHhh
Confidence 5556665421 12467788889999998864 2457888888899999999876
No 187
>PRK09265 aminotransferase AlaT; Validated
Probab=99.92 E-value=1.5e-22 Score=203.79 Aligned_cols=342 Identities=13% Similarity=0.073 Sum_probs=206.4
Q ss_pred CCCEEEecccChhhccCCC-CcHHHHHHHHHHHHhcCCCCCC---CHHHHHHHHHHHhhC--C-CCCeEEEeCCHHHHHH
Q 011856 97 DGNEYIDYVGSWGPAIIGH-ADDQVLAALGETMKKGTSFGAP---CLLENVLAEMVISAV--P-SIEMVRFVNSGTEACM 169 (476)
Q Consensus 97 dG~~~iD~~~~~~~~~lG~-~~p~v~~a~~~~l~~~~~~~~~---~~~~~~la~~l~~~~--~-~~e~v~~~~sGseA~~ 169 (476)
.|..++||..|.. +.+++ .++.+.+++.+.+.....|+.+ .++++++++.+.... + .+++|++++|+++++.
T Consensus 31 ~~~~~i~l~~g~p-~~~~~~~~~~i~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~~l~ 109 (404)
T PRK09265 31 EGHKILKLNIGNP-APFGFEAPDEILRDVIRNLPTAQGYSDSKGLFSARKAIMQYYQQKGIPDVDVDDIYIGNGVSELIV 109 (404)
T ss_pred cCCCeEEecCCCC-CcCCCCCCHHHHHHHHHHhhcCCCCCCCCCcHHHHHHHHHHHhccCCCCCCcccEEEeCChHHHHH
Confidence 4456677777622 34455 4788999888776543333221 244555555554322 2 5789999999999999
Q ss_pred HHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEE
Q 011856 170 GVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAA 249 (476)
Q Consensus 170 ~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~ 249 (476)
.+++.. ..+++.|++.+++|..+...+ ...|..+.........+. .-|++++++.+.. ++++
T Consensus 110 ~~~~~~--~~~gd~Vlv~~p~y~~~~~~~-~~~g~~~v~~~~~~~~~~------------~~d~~~l~~~~~~---~~~~ 171 (404)
T PRK09265 110 MAMQAL--LNNGDEVLVPAPDYPLWTAAV-SLSGGKPVHYLCDEEAGW------------FPDLDDIRSKITP---RTKA 171 (404)
T ss_pred HHHHHh--CCCCCEEEEeCCCCcChHHHH-HHcCCEEEEEecccccCC------------CCCHHHHHHhccc---cceE
Confidence 998842 345677888888887644333 333332222111100010 0178889888753 4555
Q ss_pred EEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccchhhccCCCCc--h---hhhhhhcC-CCCcE
Q 011856 250 IILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPD--L---TTLGKIIG-GGLPV 322 (476)
Q Consensus 250 vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pD--i---~t~sK~lg-~G~~i 322 (476)
|++...+|++|.+.+.++ +++|.++|++||++||+||+|.+| ..+.... ......++ + -+|||.++ +|+|+
T Consensus 172 v~l~~P~NPtG~~~~~~~-~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~-~~~~~~~~~~vi~~~S~SK~~~~pGlRi 249 (404)
T PRK09265 172 IVIINPNNPTGAVYSKEL-LEEIVEIARQHNLIIFADEIYDKILYDGAVHI-SIASLAPDLLCVTFNGLSKAYRVAGFRV 249 (404)
T ss_pred EEEECCCCCCCcCCCHHH-HHHHHHHHHHCCCEEEEehhhhhccCCCCCcC-CHHHcCCCceEEEEecchhhccCcccce
Confidence 554444667888776555 999999999999999999999887 4332110 11111222 2 36999996 79999
Q ss_pred EEEEe--cHH----HHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC-CCHH---HHHHHHHHHHHHHHHHHhhhcC
Q 011856 323 GAYGG--RRD----IMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTY---EYLNKITGELTQGIIDAGKKAG 392 (476)
Q Consensus 323 G~~~~--~~~----i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~---~~~~~~~~~l~~~L~~~~~~~~ 392 (476)
||+++ +++ +++.+.. ....+++.|.+++.++.++|...+. .++. +++.++.+.+.+.|+++. +
T Consensus 250 G~~v~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~---~ 322 (404)
T PRK09265 250 GWMVLSGPKKHAKGYIEGLDM----LASMRLCANVPAQHAIQTALGGYQSINELILPGGRLYEQRDRAWELLNAIP---G 322 (404)
T ss_pred EEEEEeCchHHHHHHHHHHHH----HhccccCCCcHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCC---C
Confidence 99985 444 3333321 1122456678888888888742111 1121 234444444544444320 2
Q ss_pred CceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCC------CcceEEeCCCcHHHHHHHHHH
Q 011856 393 HAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITA 466 (476)
Q Consensus 393 ~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~------~~~~~~~~~~t~e~i~~~~~~ 466 (476)
+....+..|.++++.+..... +.......+.+.+.++||.+.|+. ...+|+++..+++++++++++
T Consensus 323 ~~~~~p~~g~~l~~~~~~~~~--------~~~~~~~~~~~~l~~~gv~v~pg~~F~~~~~~~~Ri~~~~~~e~l~~~l~r 394 (404)
T PRK09265 323 VSCVKPKGALYAFPKLDPKVY--------PIHDDEQFVLDLLLQEKVLLVQGTGFNWPEPDHFRIVTLPRVDDLEEAIGR 394 (404)
T ss_pred CcccCCCcceEEEEEeccccc--------CCCCHHHHHHHHHHhCCEEEECchhhCCCCCCeEEEEeCCCHHHHHHHHHH
Confidence 222234457778877743110 000112346677889999998863 235788888899999999999
Q ss_pred HHHHHHHh
Q 011856 467 AEKVKMRF 474 (476)
Q Consensus 467 l~~~~~~~ 474 (476)
|+++++..
T Consensus 395 l~~~l~~~ 402 (404)
T PRK09265 395 IGRFLSGY 402 (404)
T ss_pred HHHHHHHh
Confidence 99998764
No 188
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.92 E-value=3.9e-23 Score=207.77 Aligned_cols=298 Identities=13% Similarity=0.121 Sum_probs=187.9
Q ss_pred CHHHHHHHHHHHhhCC---CCCeEEE--eCCHHHHHHHHHHHHHhc-cCCceEEEEeCCCCCCchhHHhhcCCCCccCCC
Q 011856 138 CLLENVLAEMVISAVP---SIEMVRF--VNSGTEACMGVLRLARAF-TGRERIIKFEGCYHGHADPFLVKAGSGVATLGL 211 (476)
Q Consensus 138 ~~~~~~la~~l~~~~~---~~e~v~~--~~sGseA~~~al~~ar~~-~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~ 211 (476)
.++++++++++.+... .+++|++ +++|++|+..++.+.+.+ ..++.|++.+++|+++.. .+...|..+..++.
T Consensus 75 ~~lR~aia~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~-~~~~~G~~~~~v~l 153 (404)
T PTZ00376 75 QSFIEAAQKLLFGEASYALAEKRIATVQALSGTGALRLGFEFLKRFLPAGTTVYVSNPTWPNHVN-IFKSAGLNVKEYRY 153 (404)
T ss_pred HHHHHHHHHHhcCCCccccccCeEEEeeccCcchHHHHHHHHHHHhcCCCCEEEEcCCCchhHHH-HHHHcCCceeeccc
Confidence 4666677776654431 4678884 889999999988765444 456788888999988544 44555554443322
Q ss_pred -C-CCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccc
Q 011856 212 -P-DSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM 289 (476)
Q Consensus 212 -~-~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~ 289 (476)
+ ...++ |++.+++.+++..++.+++++...+|++|.+.+.++ +++|.++|++||++||+||+|
T Consensus 154 ~~~~~~~~--------------d~~~l~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~-~~~l~~~a~~~~~~ii~De~Y 218 (404)
T PTZ00376 154 YDPKTKGL--------------DFDGMLEDLRTAPNGSVVLLHACAHNPTGVDPTEEQ-WKEIADVMKRKNLIPFFDMAY 218 (404)
T ss_pred cCcccCCc--------------CHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHH-HHHHHHHHHhCCcEEEEehhh
Confidence 1 11121 789999998754334566666666777888876555 999999999999999999999
Q ss_pred cCc-cccc---cchhhcc-CCCCch---hhhhhhcC-CCCcEEEE---EecHHHHHhhcCCCCccccCCC-CCcHHHHHH
Q 011856 290 TGF-RLAY---GGAQEYF-GVTPDL---TTLGKIIG-GGLPVGAY---GGRRDIMEMVAPAGPMYQAGTL-SGNPLAMTA 356 (476)
Q Consensus 290 ~g~-r~g~---~~~~~~~-g~~pDi---~t~sK~lg-~G~~iG~~---~~~~~i~~~l~~~~~~~~~~t~-~~~~~~~aa 356 (476)
.+| ..+. ......+ ...+++ .+|||.++ +|||+||+ ++++++++.+...-......++ +.+++++.+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRvG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~ 298 (404)
T PTZ00376 219 QGFASGDLDKDAYAIRLFAERGVEFLVAQSFSKNMGLYGERIGALHIVCANKEEAANVLSQLKLIIRPMYSSPPIHGARI 298 (404)
T ss_pred cCccCCCHHHHHHHHHHHHhcCCcEEEEEeCCCcccccccccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCchHHHHH
Confidence 888 4321 1011111 111233 37999999 89999998 5788765543210000111223 346678888
Q ss_pred HHHHHHHhc---C-----CCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHH
Q 011856 357 GIHTLKRLK---E-----PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFA 428 (476)
Q Consensus 357 a~aal~~~~---~-----~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~ 428 (476)
+.++|+.-. + .+.+++++++.+.+.+.|++......+....+..|.++|+.+. .
T Consensus 299 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~p~gg~f~~~~~~------------------~ 360 (404)
T PTZ00376 299 ADRILSDPELRAEWLSELKEMSGRIQNMRQLLYDELKALGSPGDWEHIINQIGMFSFTGLT------------------K 360 (404)
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccccCceEEEecCCC------------------H
Confidence 877774211 0 1223455566666666666542111111112334555555441 3
Q ss_pred HHHHHHHHC-CeEeccCCCcceEEeCC-CcHHHHHHHHHHHHHHHHH
Q 011856 429 RFYRGMLEE-GVYFAPSQFEAGFTSLA-HSSDDIQHTITAAEKVKMR 473 (476)
Q Consensus 429 ~~~~~l~~~-Gv~~~~~~~~~~~~~~~-~t~e~i~~~~~~l~~~~~~ 473 (476)
++++.|+++ ||++.|++ |+++. .+.++++.++++|++++..
T Consensus 361 ~~~~~L~~~~~v~v~p~~----Ris~~~~~~~~~~~~~~~l~~~~~~ 403 (404)
T PTZ00376 361 EQVERLIEKYHIYLLDNG----RISVAGLTSKNVDYVAEAIHDVVRN 403 (404)
T ss_pred HHHHHHHHhCCEeecCCC----eEEEeccCHHhHHHHHHHHHHHHhc
Confidence 667778866 99999874 77775 8999999999999998753
No 189
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.92 E-value=1.5e-22 Score=203.69 Aligned_cols=344 Identities=14% Similarity=0.066 Sum_probs=208.9
Q ss_pred CCCEEEecccChhhc-cCCCCcHHHHHHHHHHHHhcCCCCC-CC----HHHHHHHHHHHhhCC---CCCeEEEeCCHHHH
Q 011856 97 DGNEYIDYVGSWGPA-IIGHADDQVLAALGETMKKGTSFGA-PC----LLENVLAEMVISAVP---SIEMVRFVNSGTEA 167 (476)
Q Consensus 97 dG~~~iD~~~~~~~~-~lG~~~p~v~~a~~~~l~~~~~~~~-~~----~~~~~la~~l~~~~~---~~e~v~~~~sGseA 167 (476)
.|..++|+..+.... +.-..++.+.+++.+.+.......| +. +++.++++.+....+ ..+++++++|+++|
T Consensus 29 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~ii~t~G~t~a 108 (403)
T TIGR01265 29 PEKPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKFNGYAPSVGALAAREAVAEYLSSDLPGKLTADDVVLTSGCSQA 108 (403)
T ss_pred cCCCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHHHEEEecChHHH
Confidence 356778888774310 1112578999999988865322222 22 445555555544322 45789999999999
Q ss_pred HHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCe
Q 011856 168 CMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEI 247 (476)
Q Consensus 168 ~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~ 247 (476)
+..+++.. ...++.|++.+++|..+.. .....|..+...+.....+. --|++++++.+.. ++
T Consensus 109 l~~~~~~l--~~~gd~Vlv~~p~y~~~~~-~~~~~g~~~~~~~~~~~~~~------------~~d~~~l~~~~~~---~~ 170 (403)
T TIGR01265 109 IEICIEAL--ANPGANILVPRPGFPLYDT-RAAFSGLEVRLYDLLPEKDW------------EIDLDGLEALADE---KT 170 (403)
T ss_pred HHHHHHHh--CCCCCEEEEeCCCchhHHH-HHHHcCCEEEEecCCcccCC------------ccCHHHHHHHhCc---Cc
Confidence 99999953 2456778888887765432 33333443322211111010 0178999888763 35
Q ss_pred EEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccc-hhhccCCCCchh---hhhhhcC-CCCc
Q 011856 248 AAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGG-AQEYFGVTPDLT---TLGKIIG-GGLP 321 (476)
Q Consensus 248 a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~-~~~~~g~~pDi~---t~sK~lg-~G~~ 321 (476)
+++++...++++|.+.+.++ +++|.++|+++|+++|+||+|.+| ..+..+ ....+.-.++++ +|||.++ +|+|
T Consensus 171 ~~v~i~~p~NPtG~~~~~~~-~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlR 249 (403)
T TIGR01265 171 VAIVVINPSNPCGSVFSRDH-LQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMASFASIVPVLSLGGISKRWVVPGWR 249 (403)
T ss_pred cEEEEecCCCCCCCCCCHHH-HHHHHHHHHHCCCEEEEEccccccccCCCCccchhhhccCCcEEEEeecccccCCCcce
Confidence 55555544666787766555 999999999999999999999988 444221 111111112233 7999977 7999
Q ss_pred EEEEEec--HH-----HHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhc-C--CCHHHHHHHHHHHHHHHHHHHhhhc
Q 011856 322 VGAYGGR--RD-----IMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLK-E--PGTYEYLNKITGELTQGIIDAGKKA 391 (476)
Q Consensus 322 iG~~~~~--~~-----i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~-~--~~~~~~~~~~~~~l~~~L~~~~~~~ 391 (476)
+||++++ ++ +++.+.. . ...+++.+.+++.++.++|+... . .+.+++++++.+.+.+.|+.. .
T Consensus 250 iG~~v~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---~ 322 (403)
T TIGR01265 250 LGWIIIHDPHGIFRDTVLQGLKN---L-LQRILGPATIVQGALPDILENTPQEFFDGKISVLKSNAELCYEELKDI---P 322 (403)
T ss_pred EEEEEEeCchhhhHHHHHHHHHH---H-hhhhcCCChHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcC---C
Confidence 9999873 22 3333321 1 11234668888888888886311 1 233444445555555555432 1
Q ss_pred CCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHH-HHCCeEeccCC----CcceEEeCCCcHHHHHHHHHH
Q 011856 392 GHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGM-LEEGVYFAPSQ----FEAGFTSLAHSSDDIQHTITA 466 (476)
Q Consensus 392 ~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~~~~~~----~~~~~~~~~~t~e~i~~~~~~ 466 (476)
++....+..|.++++.+...... +.....++...+ .++||.+.|+. .+.+|+++...++.+++++++
T Consensus 323 ~~~~~~p~~g~f~~~~~~~~~~~--------~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~iRis~~~~~~~l~~~l~~ 394 (403)
T TIGR01265 323 GLVCPKPEGAMYLMVKLELELFP--------EIKDDVDFCEKLVREESVICLPGSAFGLPNWVRITITVPESMLEEACSR 394 (403)
T ss_pred CceecCCCceeEEEEeccccccC--------CCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEecCCHHHHHHHHHH
Confidence 22222355688888887532100 000124666665 47899999874 246788888889999999999
Q ss_pred HHHHHHHh
Q 011856 467 AEKVKMRF 474 (476)
Q Consensus 467 l~~~~~~~ 474 (476)
|.+++++.
T Consensus 395 l~~~~~~~ 402 (403)
T TIGR01265 395 IKEFCERH 402 (403)
T ss_pred HHHHHHhc
Confidence 99988653
No 190
>PRK07337 aminotransferase; Validated
Probab=99.92 E-value=1.5e-22 Score=202.81 Aligned_cols=333 Identities=12% Similarity=0.095 Sum_probs=209.2
Q ss_pred EEEecccChhhccCCCCcHHHHHHHHHHHHhc-CCCC---CCCHHHHHHHHHHHhhCC---CCCeEEEeCCHHHHHHHHH
Q 011856 100 EYIDYVGSWGPAIIGHADDQVLAALGETMKKG-TSFG---APCLLENVLAEMVISAVP---SIEMVRFVNSGTEACMGVL 172 (476)
Q Consensus 100 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~-~~~~---~~~~~~~~la~~l~~~~~---~~e~v~~~~sGseA~~~al 172 (476)
.++||..+. ..++ .++.+.+++.+.+... ..|. +..+++..+++++.+.++ .++++++++|+++|+..++
T Consensus 31 ~~i~l~~~~--~~~~-~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~al~~~~ 107 (388)
T PRK07337 31 DIIHMGIGE--PDFT-APEPVVEAAARALRRGVTQYTSALGLAPLREAIAAWYARRFGLDVAPERIVVTAGASAALLLAC 107 (388)
T ss_pred CEEEeCCcC--CCCC-CCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCChHhEEEecCcHHHHHHHH
Confidence 356666663 1222 4688999998887643 2232 134666777777765543 5689999999999999888
Q ss_pred HHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEE
Q 011856 173 RLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIIL 252 (476)
Q Consensus 173 ~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ 252 (476)
... ...++.|++.+++|.+.... ....|..+...+.....+. . -|++++++.+.. ++++|++
T Consensus 108 ~~l--~~~gd~Vlv~~p~y~~~~~~-~~~~g~~~~~~~~~~~~~~---------~---~~~~~l~~~~~~---~~~~v~l 169 (388)
T PRK07337 108 LAL--VERGDEVLMPDPSYPCNRHF-VAAAEGRPVLVPSGPAERF---------Q---LTAADVEAAWGE---RTRGVLL 169 (388)
T ss_pred HHh--cCCCCEEEEeCCCchhhHHH-HHHcCCEEEEeecCCccCC---------c---CCHHHHHhhcCc---cceEEEE
Confidence 842 34567888888888875433 3333433322221100000 0 168889888763 4455555
Q ss_pred cccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccchhhccCCCCchh---hhhhhcC-CCCcEEEEEe
Q 011856 253 EPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLT---TLGKIIG-GGLPVGAYGG 327 (476)
Q Consensus 253 ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pDi~---t~sK~lg-~G~~iG~~~~ 327 (476)
...+|++|.+.+.++ +++|.++|++||+++|+||+|.+| ..+... ......++++ +|||.++ +|+|+||+++
T Consensus 170 ~~p~NPtG~~~~~~~-~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~--~~~~~~~~vi~~~S~SK~~~~~G~RiG~~~~ 246 (388)
T PRK07337 170 ASPSNPTGTSIAPDE-LRRIVEAVRARGGFTIVDEIYQGLSYDAAPV--SALSLGDDVITINSFSKYFNMTGWRLGWLVV 246 (388)
T ss_pred ECCCCCCCcCcCHHH-HHHHHHHHHHCCCEEEEeccccccccCCCCc--ChhhccCCEEEEEechhhcCCchhheeeeec
Confidence 444566787776555 999999999999999999999877 433211 1112234543 7999998 8999999999
Q ss_pred cHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHh--cC-CCHHHHHHHHHHHHHHHHHHHhhhcCCce-Eeeeecee
Q 011856 328 RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRL--KE-PGTYEYLNKITGELTQGIIDAGKKAGHAI-CGGYISGM 403 (476)
Q Consensus 328 ~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~--~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~v~~~g~~ 403 (476)
++++++.+.. .......+.+.+++.++.++++.- .. .+..++++++.+++.+.|++. +... ..+..|.+
T Consensus 247 ~~~l~~~l~~---~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~----~~~~~~~p~~g~f 319 (388)
T PRK07337 247 PEALVGTFEK---LAQNLFICASALAQHAALACFEPDTLAIYERRRAEFKRRRDFIVPALESL----GFKVPVMPDGAFY 319 (388)
T ss_pred CHHHHHHHHH---HHHHhccCCChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHhc----CCccccCCCeeEE
Confidence 9999887763 212223456778888877776411 00 223344445555555555443 3222 13456788
Q ss_pred EEEEEecCCCcCchhhcccchHHHHHHHHHH-HHCCeEeccCC-------CcceEEeCCCcHHHHHHHHHHHHHHH
Q 011856 404 FGFFFTEGPVYNFEDAKKSETTKFARFYRGM-LEEGVYFAPSQ-------FEAGFTSLAHSSDDIQHTITAAEKVK 471 (476)
Q Consensus 404 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~~~~~~-------~~~~~~~~~~t~e~i~~~~~~l~~~~ 471 (476)
+++.+..... ++.....+++..+ .++||.+.|+. .+++|+++..+++++++++++|.+++
T Consensus 320 ~~~~~~~~~~--------~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~Ri~~~~~~~~l~~~l~rl~~~l 387 (388)
T PRK07337 320 VYADCRGVAH--------PAAGDSAALTQAMLHDAGVVLVPGRDFGPHAPRDYIRLSYATSMSRLEEAVARLGKLF 387 (388)
T ss_pred EEEecccccC--------CCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCCEEEEEecCCHHHHHHHHHHHHHHh
Confidence 8888753100 0111124666664 57899998752 24678888888999999999998765
No 191
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=1.1e-22 Score=202.48 Aligned_cols=322 Identities=15% Similarity=0.138 Sum_probs=204.8
Q ss_pred CCEEEecccChhhccCCCCcHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHHH
Q 011856 98 GNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLAR 176 (476)
Q Consensus 98 G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~~~~~~~~~~la~~l~~~~~-~~e~v~~~~sGseA~~~al~~ar 176 (476)
+..++||..|. ++++ .++.+.+++.+.......| +.....+|.+.++++++ ..++|++++|+++++..+++..
T Consensus 35 ~~~~i~l~~~~--~~~~-~~~~~~~al~~~~~~~~~Y--~~~~g~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~~- 108 (371)
T PRK05166 35 VPRIAKLGSNE--NPLG-PSPAVRRAFADIAELLRLY--PDPQGRALREAIAARTGVPADRIILGNGSEDLIAVICRAV- 108 (371)
T ss_pred CcceEEcCCCC--CCCC-CCHHHHHHHHHHHHHhhcC--CCCcHHHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHHh-
Confidence 44689998875 4555 6788999988755443333 33222478888888775 5789999999999999888742
Q ss_pred hccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccC
Q 011856 177 AFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVV 256 (476)
Q Consensus 177 ~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~ 256 (476)
...++.|++.+++|.... ......|..+...+.....++ |++++++.+++ ++++|++...+
T Consensus 109 -~~~gd~vli~~P~y~~~~-~~~~~~g~~~~~v~~~~~~~~--------------~~~~l~~~~~~---~~~~v~l~~p~ 169 (371)
T PRK05166 109 -LRPGDRVVTLYPSFPLHE-DYPTMMGARVERVTVTPDLGF--------------DLDALCAAVAR---APRMLMFSNPS 169 (371)
T ss_pred -cCCCCEEEEcCCChHHHH-HHHHHcCCeEEEeecCCCCCC--------------CHHHHHHhhhc---CCCEEEEeCCC
Confidence 345677888888886543 233334443322211111111 78999988864 34555555556
Q ss_pred CCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccccc-chhhcc-CCCCchh---hhhhhcC-CCCcEEEEEe-c
Q 011856 257 GNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG-GAQEYF-GVTPDLT---TLGKIIG-GGLPVGAYGG-R 328 (476)
Q Consensus 257 ~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~-~~~~~~-g~~pDi~---t~sK~lg-~G~~iG~~~~-~ 328 (476)
|++|.+.+.++ +++|.++|++ ++++|+||+|..| ..+.. ...... ...++++ +|||.++ +|+|+||+++ +
T Consensus 170 NPtG~~~~~~~-~~~l~~~~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~~ 247 (371)
T PRK05166 170 NPVGSWLTADQ-LARVLDATPP-ETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVSD 247 (371)
T ss_pred CCCCCCCCHHH-HHHHHHhCCC-CcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecCC
Confidence 66888877544 7777777764 8899999999877 32211 111111 1122333 7999999 8999999765 7
Q ss_pred HHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEE
Q 011856 329 RDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFF 407 (476)
Q Consensus 329 ~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~ 407 (476)
+++++.+... ...++.|.+++.++.+++..-.. ++..+.++++.+++.+.|++. ++. ..+..|.++++.
T Consensus 248 ~~l~~~~~~~-----~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~----g~~-~~p~~g~fl~~~ 317 (371)
T PRK05166 248 PELVGLLDRV-----RTPFNVNGAAQAAALAALDDEEHLAKGVALALAERERLKKELAEM----GYR-IAPSRANFLFFD 317 (371)
T ss_pred HHHHHHHHHh-----ccCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC----cCe-eCCCcCCEEEEe
Confidence 8888877531 12456788888888777742111 233344445555555555543 332 235567787776
Q ss_pred EecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCC----CcceEEeCCCcHHHHHHHHHHHHHHHH
Q 011856 408 FTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ----FEAGFTSLAHSSDDIQHTITAAEKVKM 472 (476)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~----~~~~~~~~~~t~e~i~~~~~~l~~~~~ 472 (476)
+.. + ..++.+.|+++||.+.++. .+.+|+++. +.++.+++++.|++++.
T Consensus 318 ~~~------------~---~~~l~~~l~~~gi~v~p~~~~~~~~~iRi~~~-~~~~~~~l~~~l~~i~~ 370 (371)
T PRK05166 318 ARR------------P---ASAVAEALLRQGVIVKPWKQPGFETFIRVSIG-SPEENDHFVAALDKVLE 370 (371)
T ss_pred CCC------------C---HHHHHHHHHHCCeEEecCCCCCCCCeEEEEcC-CHHHHHHHHHHHHHHhh
Confidence 421 1 2568889999999998863 235788777 56678888888877643
No 192
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.91 E-value=1.4e-22 Score=204.19 Aligned_cols=337 Identities=16% Similarity=0.128 Sum_probs=199.0
Q ss_pred CCEEEecccChhhccCCCCcHHHHHHHHHHHHhc----CCCCC-C----CHHHHHHHHHHHhhCC---CCCeEEEeCCHH
Q 011856 98 GNEYIDYVGSWGPAIIGHADDQVLAALGETMKKG----TSFGA-P----CLLENVLAEMVISAVP---SIEMVRFVNSGT 165 (476)
Q Consensus 98 G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~----~~~~~-~----~~~~~~la~~l~~~~~---~~e~v~~~~sGs 165 (476)
+..++|+..+. ..++ .+|.+.+++.+.+.+. ...+| + .+++.++++++.+..+ .+++|++|+|+.
T Consensus 33 ~~~~i~l~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~ 109 (409)
T PRK07590 33 EAKIIRLGIGD--VTQP-LPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARGCDISADEIFISDGAK 109 (409)
T ss_pred CCceEEecCcC--CCCC-CCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcCCcCChhhEEECCCHH
Confidence 44567877773 2333 5788999998887652 11222 2 3466666666554432 578999999999
Q ss_pred HHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCC-CccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCC
Q 011856 166 EACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSG-VATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK 244 (476)
Q Consensus 166 eA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~ 244 (476)
+++...+. .+.+++.|++.+++|.+....+. ..|.. +.. + .+. ..+++.+|.+.-+.++.-+.+
T Consensus 110 ~al~~l~~---~~~~gd~V~v~~P~Y~~~~~~~~-~~g~~~~~~---~--~~~----~~~~~~v~~~~~~~~~~d~~~-- 174 (409)
T PRK07590 110 CDTGNILD---IFGPDNTIAVTDPVYPVYVDTNV-MAGRTGEAN---E--DGR----YSGIVYLPCTAENNFVPELPE-- 174 (409)
T ss_pred HHHHHHHH---hcCCCCEEEEeCCCCcchHHHHH-HcCCccccc---c--ccc----ccceeEeecccccCCcccCcc--
Confidence 99987544 45567889999999988654333 33321 100 0 000 001222222100001000111
Q ss_pred CCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccccc-chhhccCCCCc----hhhhhhhcC-
Q 011856 245 GEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG-GAQEYFGVTPD----LTTLGKIIG- 317 (476)
Q Consensus 245 ~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~-~~~~~~g~~pD----i~t~sK~lg- 317 (476)
.++++|++...+|++|.+.+.++ +++|.++|++||++||+||+|..| ..+.. -....+.-..+ +-||||.++
T Consensus 175 ~~~k~i~l~nP~NPTG~~~s~~~-~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~ 253 (409)
T PRK07590 175 EKVDIIYLCFPNNPTGTVLTKEQ-LKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIEGARECAIEFRSFSKTAGF 253 (409)
T ss_pred cCceEEEEeCCCCCcCCcCCHHH-HHHHHHHHHHcCeEEEEEccchhhccCCCCCcchhhCCCcccceEEEecCccccCC
Confidence 24566655444667888776555 999999999999999999999888 43321 11111111112 237999998
Q ss_pred CCCcEEEEEecHHHHHhhcCCC--------CccccCCC-CCcHHHHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHHHH
Q 011856 318 GGLPVGAYGGRRDIMEMVAPAG--------PMYQAGTL-SGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGII 385 (476)
Q Consensus 318 ~G~~iG~~~~~~~i~~~l~~~~--------~~~~~~t~-~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~ 385 (476)
+|+|+||+++++++++.+.... ......++ +.+.+++.++.++++.-.. +++.+.++++.+.+.+.|+
T Consensus 254 pGlRiG~~i~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~ 333 (409)
T PRK07590 254 TGTRCAYTVVPKELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSPEGKAQIKELIDYYMENAKIIREGLE 333 (409)
T ss_pred cCceeEEEEcCHHHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999887321000 00011122 4577888887777642100 2234444455555555555
Q ss_pred HHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHH-HCCeEeccCC------CcceEEeCCCcHH
Q 011856 386 DAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ------FEAGFTSLAHSSD 458 (476)
Q Consensus 386 ~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~------~~~~~~~~~~t~e 458 (476)
+ +++....+..|.++|+.+... . ...+++..++ ++||.+.|+. .+.+|+++..+++
T Consensus 334 ~----~~~~~~~~~g~~f~wi~~~~~-~------------~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~ 396 (409)
T PRK07590 334 S----AGFEVYGGVNAPYIWVKTPDG-M------------SSWDFFDKLLQEANVVGTPGSGFGPSGEGYFRLSAFGSRE 396 (409)
T ss_pred h----cCCceecCCcceEEEEECCCC-C------------CHHHHHHHHHHHCCEEEeChhHhCCCCCCEEEEEccCCHH
Confidence 4 332222223566888887431 0 1246677766 5699998863 2357888777899
Q ss_pred HHHHHHHHHHHH
Q 011856 459 DIQHTITAAEKV 470 (476)
Q Consensus 459 ~i~~~~~~l~~~ 470 (476)
++++++++|.++
T Consensus 397 ~l~~~l~rl~~~ 408 (409)
T PRK07590 397 NVLEAMERIKKA 408 (409)
T ss_pred HHHHHHHHHHhh
Confidence 999999999875
No 193
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.91 E-value=2.9e-22 Score=204.07 Aligned_cols=306 Identities=14% Similarity=0.108 Sum_probs=187.3
Q ss_pred CHHHHHHHHHHHhhCC-----CCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCC
Q 011856 138 CLLENVLAEMVISAVP-----SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLP 212 (476)
Q Consensus 138 ~~~~~~la~~l~~~~~-----~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~ 212 (476)
.+++.++++++.+.++ .+++|++++|+++++..++... ...++.|++.++.|.+....+....|..+..++..
T Consensus 89 ~~LR~aiA~~l~~~~~~~~~v~~~~Iiit~Ga~~al~~l~~~l--~~pGd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~ 166 (468)
T PLN02450 89 PAFKNALAEFMSEIRGNKVTFDPNKLVLTAGATSANETLMFCL--AEPGDAFLLPTPYYPGFDRDLKWRTGVEIVPIHCS 166 (468)
T ss_pred HHHHHHHHHHHHHhhCCCCCcChHHeEEccChHHHHHHHHHHh--CCCCCEEEECCCCCCchHHHHhhcCCcEEEEEecC
Confidence 4677788888876432 5789999999999999998831 24566788888888775443332344433322211
Q ss_pred CCCCCCCCCCCceeeccCCCHHHHHHHHhcC---CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccc
Q 011856 213 DSPGVPKGATYETLTAPFNDVSALENLFENN---KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM 289 (476)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~---~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~ 289 (476)
...++ . -|++++++.+++. ..++++|++...+|++|.+.+.++ +++|.++|++||++||+||+|
T Consensus 167 ~~~~~-----------~-~~~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~-l~~ll~~a~~~~~~iI~DE~Y 233 (468)
T PLN02450 167 SSNGF-----------Q-ITESALEEAYQQAQKLNLKVKGVLITNPSNPLGTTTTRTE-LNLLVDFITAKNIHLISDEIY 233 (468)
T ss_pred CccCC-----------c-CCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcccCHHH-HHHHHHHHHHCCcEEEEEccc
Confidence 11111 0 1678888887641 225665555544566777765554 999999999999999999999
Q ss_pred cCc-cccccch--hhcc------CC--CCch---hhhhhhcC-CCCcEEEEEecHH-HHHhhcCCCCccccCCCCCcHHH
Q 011856 290 TGF-RLAYGGA--QEYF------GV--TPDL---TTLGKIIG-GGLPVGAYGGRRD-IMEMVAPAGPMYQAGTLSGNPLA 353 (476)
Q Consensus 290 ~g~-r~g~~~~--~~~~------g~--~pDi---~t~sK~lg-~G~~iG~~~~~~~-i~~~l~~~~~~~~~~t~~~~~~~ 353 (476)
.++ ..+..+. .... +. ...+ -+|||.++ +|+|+||++++++ +++.+.. .... .+.+.++
T Consensus 234 ~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~li~~~~~l~~~~~~---~~~~--~~~s~~~ 308 (468)
T PLN02450 234 SGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLGLPGFRVGAIYSNDEMVVSAATK---MSSF--GLVSSQT 308 (468)
T ss_pred cccccCCCCcccHHHHhhhcccccCCCCCcEEEEEeccccCCCCCccEEEEEECCHHHHHHHHH---Hhhc--CCCCHHH
Confidence 876 4432211 1111 11 1222 37999998 8999999999754 5665542 1111 2346778
Q ss_pred HHHHHHHHHHhcC-----CCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHH
Q 011856 354 MTAGIHTLKRLKE-----PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFA 428 (476)
Q Consensus 354 ~aaa~aal~~~~~-----~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~ 428 (476)
+.++.+.|+.-.- ++.+++++++.+.+.+.|+ ++++....+..|.++|+.+...- . ........
T Consensus 309 Q~a~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~----~~gi~~~~~~~g~flwi~l~~~~-~------~~~~~~~~ 377 (468)
T PLN02450 309 QYLLSALLSDKKFTKNYLEENQKRLKQRQKKLVSGLE----AAGIKCLKSNAGLFCWVDMRHLL-K------SNTFEAEM 377 (468)
T ss_pred HHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHH----HcCCcccCCCceEEEEEEchHhc-C------cCCchHHH
Confidence 8887777642100 1122333334444444443 34433223445668888874210 0 00111223
Q ss_pred HHHHHHH-HCCeEeccCC------CcceEEeCC-CcHHHHHHHHHHHHHHHHHh
Q 011856 429 RFYRGML-EEGVYFAPSQ------FEAGFTSLA-HSSDDIQHTITAAEKVKMRF 474 (476)
Q Consensus 429 ~~~~~l~-~~Gv~~~~~~------~~~~~~~~~-~t~e~i~~~~~~l~~~~~~~ 474 (476)
+++..++ ++||.+.|+. .+.+|+++. .+++++++++++|++++.+.
T Consensus 378 ~l~~~ll~~~gV~v~PG~~f~~~~~g~~Rl~f~~~~~~~l~~~l~ri~~~l~~~ 431 (468)
T PLN02450 378 ELWKKIVYEVKLNISPGSSCHCTEPGWFRVCFANMSEETLDLAMKRLKSFVESD 431 (468)
T ss_pred HHHHHHHHhCCEEEeCccccCCCCCCEEEEEecCCCHHHHHHHHHHHHHHHHhc
Confidence 5666666 5799999874 235788888 48999999999999988654
No 194
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.91 E-value=1.5e-22 Score=204.76 Aligned_cols=336 Identities=14% Similarity=0.139 Sum_probs=203.0
Q ss_pred EEecccChhhccCCCC--cHHHHHHHHHHHHhc------CCCC---CCCHHHHHHHHHHHhhCC---CCCeEEEeCCHHH
Q 011856 101 YIDYVGSWGPAIIGHA--DDQVLAALGETMKKG------TSFG---APCLLENVLAEMVISAVP---SIEMVRFVNSGTE 166 (476)
Q Consensus 101 ~iD~~~~~~~~~lG~~--~p~v~~a~~~~l~~~------~~~~---~~~~~~~~la~~l~~~~~---~~e~v~~~~sGse 166 (476)
.+||..+ ++.-.. .+.+.+++.+.+... ..|+ +..+++..+++++.+.++ .+++|++++|+++
T Consensus 32 ~i~l~~g---~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~~~I~it~Ga~~ 108 (416)
T PRK09440 32 AIMLGGG---NPAHIPEMEDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNISPQNIALTNGSQS 108 (416)
T ss_pred ceeccCC---CCCccCCHHHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccChHH
Confidence 5777766 332122 235667776665432 1232 134677778887766543 5789999999999
Q ss_pred HHHHHHHHHHhc---cCCceEEE-EeCCCCCCchhHHhhc---CCCCccCCCCCCCCCCCCCCCceeeccC-CCHHHHHH
Q 011856 167 ACMGVLRLARAF---TGRERIIK-FEGCYHGHADPFLVKA---GSGVATLGLPDSPGVPKGATYETLTAPF-NDVSALEN 238 (476)
Q Consensus 167 A~~~al~~ar~~---~~~~~ii~-~~~~yhg~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~le~ 238 (476)
++..++++.... ..++.|++ .+++|.++...+.... +.+....+.+. + .+.+ -|+++|+
T Consensus 109 al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~~~----------~--~~~~~~d~~~l~- 175 (416)
T PRK09440 109 AFFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIELLPE----------G--QFKYHVDFEHLH- 175 (416)
T ss_pred HHHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhccCceeecccccccccc----------c--ccccCCCHHHcc-
Confidence 999999843211 12467888 6899988654322111 00000000000 0 0001 1677776
Q ss_pred HHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCccccccchhhccCCCCc---hhhhhhh
Q 011856 239 LFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPD---LTTLGKI 315 (476)
Q Consensus 239 ~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pD---i~t~sK~ 315 (476)
+. ..++++++...+|++|.+.+.++ +++|.++|++||++||+||+|..+.....+........+. +.+|||.
T Consensus 176 -~~---~~~~~i~l~~P~NPTG~~~s~~~-~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~vI~~~SfSK~ 250 (416)
T PRK09440 176 -ID---EDTGAICVSRPTNPTGNVLTDEE-LEKLDALARQHNIPLLIDNAYGPPFPGIIFSEATPLWNPNIILCMSLSKL 250 (416)
T ss_pred -cC---CCceEEEEecCCCCCCccCCHHH-HHHHHHHHHHcCCcEEEeCCccccCCCcchhhcCccccCCeEEEeccccc
Confidence 22 24566666555677888876555 9999999999999999999996431111110000001223 3379997
Q ss_pred cCCCCcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCH--------HHHHHHHHHHHHHHHHHH
Q 011856 316 IGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGT--------YEYLNKITGELTQGIIDA 387 (476)
Q Consensus 316 lg~G~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~--------~~~~~~~~~~l~~~L~~~ 387 (476)
..+|+|+||+++++++++.+.. .......+.+.+.+.++.++|+. .++ .+.++++.+.+++.|.+.
T Consensus 251 ~~pGlRiG~~i~~~~l~~~~~~---~~~~~~~~~s~~~q~~~~~~l~~---~~~~~~~~~~~~~~~~~r~~~~~~~L~~~ 324 (416)
T PRK09440 251 GLPGVRCGIVIADEEIIEALSN---MNGIISLAPGRLGPAIAAEMIES---GDLLRLSETVIRPFYRQKVQLAIALLRRY 324 (416)
T ss_pred CCCcceEEEEeCCHHHHHHHHH---HHHHhccCCCcHHHHHHHHHhcc---chHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4489999999999999888763 12222345688888888887752 222 223344445555555544
Q ss_pred hhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCC-------------cceEEeCC
Q 011856 388 GKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-------------EAGFTSLA 454 (476)
Q Consensus 388 ~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~-------------~~~~~~~~ 454 (476)
....++....+..|.++|+.+..... ...++.+.|.++||.+.|+.. +++|+++.
T Consensus 325 l~~~~~~~~~p~gg~fiw~~~~~~~~------------~~~~~~~~l~~~gV~v~pg~~F~~~~~~~~~~~~~~iRis~~ 392 (416)
T PRK09440 325 LPDEPCLIHKPEGAIFLWLWFKDLPI------------TTEELYQRLKARGVLVVPGHYFFPGLDEDWPHAHQCIRMNYV 392 (416)
T ss_pred cccCCeEEecCCCceEEEEECCCCCC------------CHHHHHHHHHHCCEEEechHhhCCCCccccCCcCceEEEEec
Confidence 32222221223457888887743110 124677788899999988621 25788887
Q ss_pred CcHHHHHHHHHHHHHHHHHhh
Q 011856 455 HSSDDIQHTITAAEKVKMRFL 475 (476)
Q Consensus 455 ~t~e~i~~~~~~l~~~~~~~~ 475 (476)
.+++++++++++|++++++..
T Consensus 393 ~~~~~l~~~i~~l~~~~~~~~ 413 (416)
T PRK09440 393 QDDEEIEKGIAILAEEVEKAY 413 (416)
T ss_pred CCHHHHHHHHHHHHHHHHHHh
Confidence 799999999999999987643
No 195
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.91 E-value=1.9e-23 Score=206.08 Aligned_cols=306 Identities=13% Similarity=0.112 Sum_probs=197.8
Q ss_pred EEecccChhhccCCCCcHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHHHhcc
Q 011856 101 YIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFT 179 (476)
Q Consensus 101 ~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~~~~~~~~~~la~~l~~~~~-~~e~v~~~~sGseA~~~al~~ar~~~ 179 (476)
.+|+..|. +++|- ++.+ .......||.....+|.++++++++ .+++|++++|++|++..+++.. ..
T Consensus 30 ~~~l~~Ne--np~~~-~~~~--------~~~~~~~Yp~~~~~~l~~~~a~~~g~~~~~I~~~~Gs~e~i~~~~~~~--~~ 96 (351)
T PRK01688 30 DVWLNANE--YPTAV-EFQL--------TQQTLNRYPECQPKAVIENYAAYAGVKPEQVLVSRGADEGIELLIRAF--CE 96 (351)
T ss_pred ceEecCCC--CCCCC-Chhh--------cccccccCCCCChHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHh--cC
Confidence 48887775 66663 3432 1111233566666789999998887 7889999999999999999842 22
Q ss_pred C-CceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCC
Q 011856 180 G-RERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGN 258 (476)
Q Consensus 180 ~-~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~ 258 (476)
. ++.|++.+++|..+. ..+...|..+...+...... -|++++++.+. ++++|++...+|+
T Consensus 97 ~g~~~vli~~P~y~~y~-~~~~~~G~~~~~v~~~~~~~--------------~d~~~l~~~~~----~~~lv~l~nPnNP 157 (351)
T PRK01688 97 PGKDAILYCPPTYGMYS-VSAETIGVEIRTVPTLDNWQ--------------LDLPAIADNLD----GVKVVYVCSPNNP 157 (351)
T ss_pred CCCCEEEEcCCCHHHHH-HHHHHcCCEEEEeecCCCCC--------------CCHHHHHHhcc----CCcEEEEeCCCCC
Confidence 3 367888888886533 33344454433322211111 17888888763 4555555555667
Q ss_pred CCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccchhhccCCCCchh---hhhhhcC-CCCcEEEEEecHHHHH
Q 011856 259 SGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLT---TLGKIIG-GGLPVGAYGGRRDIME 333 (476)
Q Consensus 259 ~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pDi~---t~sK~lg-~G~~iG~~~~~~~i~~ 333 (476)
+|.+.+.++ +++|.+.|++ +++||+||+|..| .... ........++++ ||||++| +|+|+||+++++++++
T Consensus 158 TG~~~~~~~-l~~l~~~~~~-~~~vivDEay~~f~~~~s--~~~~~~~~~n~iv~rSfSK~~glaGlRiGy~i~~~~~i~ 233 (351)
T PRK01688 158 TGNLINPQD-LRTLLELTRG-KAIVVADEAYIEFCPQAS--LAGWLAEYPHLVILRTLSKAFALAGLRCGFTLANEEVIN 233 (351)
T ss_pred CCCCCCHHH-HHHHHHhCCC-CcEEEEECchhhcCCCCC--hHHHHhhCCCEEEEecchHhhcCHHHHHhHHhCCHHHHH
Confidence 788877554 7778877775 6899999999888 3221 112222234544 7999999 8999999999999998
Q ss_pred hhcCCCCccccCCCCCcHHHHHHHHHHHHHh--cC-CCHHHHHHHHHHHHHHHHHHHhhhcCCc-eEeeeeceeEEEEEe
Q 011856 334 MVAPAGPMYQAGTLSGNPLAMTAGIHTLKRL--KE-PGTYEYLNKITGELTQGIIDAGKKAGHA-ICGGYISGMFGFFFT 409 (476)
Q Consensus 334 ~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~--~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~v~~~g~~~~i~~~ 409 (476)
.+.+. ...++.|.+++.++.++|+.- +. .+..+.+.+.++++.+.|++ ++.. ...++.+.++++.+.
T Consensus 234 ~l~~~-----~~~~~v~~~~~~~a~~~L~~~~~~~~~~~~~~~~~~r~~l~~~L~~----~~~~~~~~ps~~nfi~~~~~ 304 (351)
T PRK01688 234 LLLKV-----IAPYPLSTPVADIAAQALSPQGIAAMRERVAEINANRQWLIAALKE----IPCVEQVFDSETNYILARFT 304 (351)
T ss_pred HHHhc-----cCCCCCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHh----CCCCCeECCCCCcEEEEEcC
Confidence 88742 224566777777777777521 00 22334444445555555544 3222 233556777777652
Q ss_pred cCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCC-----CcceEEeCCCcHHHHHHHHHHHH
Q 011856 410 EGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ-----FEAGFTSLAHSSDDIQHTITAAE 468 (476)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~-----~~~~~~~~~~t~e~i~~~~~~l~ 468 (476)
+ ..++.+.|+++||+++..+ .+++|+++. +++++++++++|+
T Consensus 305 ~----------------~~~l~~~L~~~gi~vr~~~~~~~~~~~iRis~~-~~~e~~~l~~al~ 351 (351)
T PRK01688 305 A----------------SSAVFKSLWDQGIILRDQNKQPGLSNCLRITIG-TREECQRVIDALR 351 (351)
T ss_pred C----------------HHHHHHHHHHCCeEEEECCCcCCCCCeEEEeCC-CHHHHHHHHHhhC
Confidence 1 2578889999999998643 245788766 7899999998873
No 196
>PRK08354 putative aminotransferase; Provisional
Probab=99.91 E-value=7.3e-22 Score=191.55 Aligned_cols=298 Identities=16% Similarity=0.085 Sum_probs=191.8
Q ss_pred CCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHH
Q 011856 97 DGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLAR 176 (476)
Q Consensus 97 dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~~~~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar 176 (476)
+...+|||..|. ++++ +|.+.+++.+.+.... .|+. ...|.++++++++ ++|++++|+++++..++.
T Consensus 6 ~~~~~i~l~~~~--np~~--p~~~~~a~~~~~~~~~--~yp~--~~~l~~~ia~~~~--~~I~vt~G~~~al~~~~~--- 72 (311)
T PRK08354 6 REEGLIDFSASV--NPYP--PEWLDEMFERAKEISG--RYTY--YEWLEEEFSKLFG--EPIVITAGITEALYLIGI--- 72 (311)
T ss_pred CccceeEecCCC--CCCC--CHHHHHHHHHHHHHhh--cCCC--hHHHHHHHHHHHC--CCEEECCCHHHHHHHHHH---
Confidence 344689999874 5554 6899999988765432 3343 3567777777764 589999999999988775
Q ss_pred hccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccC
Q 011856 177 AFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVV 256 (476)
Q Consensus 177 ~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~ 256 (476)
...+++.|++.+++|.++...+ ...|..+ ..++ .|++.+++.+++ ....++++| +
T Consensus 73 ~~~~gd~vlv~~P~y~~~~~~~-~~~g~~~-------------------~~~~-~d~~~l~~~~~~---~~~vi~~~P-~ 127 (311)
T PRK08354 73 LALRDRKVIIPRHTYGEYERVA-RFFAARI-------------------IKGP-NDPEKLEELVER---NSVVFFCNP-N 127 (311)
T ss_pred hhCCCCeEEEeCCCcHHHHHHH-HHcCCEE-------------------eecC-CCHHHHHHhhcC---CCEEEEecC-C
Confidence 3346778999999988754433 3333322 1111 278888888763 335666677 4
Q ss_pred CCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccchhhccCCCCchhhhhhhcC-CCCcEEEEEecHHHHHh
Q 011856 257 GNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEM 334 (476)
Q Consensus 257 ~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pDi~t~sK~lg-~G~~iG~~~~~~~i~~~ 334 (476)
|++|.+.+.++ +++|.++|++||+++|+||+|.+| ..+.. .. .....-+-+|||.++ +|+|+||+++ +.+.
T Consensus 128 NPTG~~~~~~~-l~~l~~~a~~~~~~li~De~y~~f~~~~~~--~~-~~~vi~~~S~SK~~~l~GlRiG~~v~---~~~~ 200 (311)
T PRK08354 128 NPDGKFYNFKE-LKPLLDAVEDRNALLILDEAFIDFVKKPES--PE-GENIIKLRTFTKSYGLPGIRVGYVKG---FEEA 200 (311)
T ss_pred CCCCCccCHHH-HHHHHHHhhhcCcEEEEeCcchhccccccc--cC-CCcEEEEeccHhhcCCccceeeeeee---hHHH
Confidence 66787776555 999999999999999999999988 43211 11 111111237999999 9999999988 4444
Q ss_pred hcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCc
Q 011856 335 VAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVY 414 (476)
Q Consensus 335 l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~ 414 (476)
++... ..+..+.++++++.+.++ +. .++++++.+.+++..+.+..... ..+.|.++.+.+.
T Consensus 201 l~~~~-----~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~l~~~l~----~~~~~~~~~~~~~----- 261 (311)
T PRK08354 201 FRSVR-----MPWSIGSTGYAFLEFLIE----DD-FEHLRKTMPLIWREKERFEKALY----VKSDANFFIKDVG----- 261 (311)
T ss_pred HHHcC-----CCccCCHHHHHHHHHHHH----hH-HHHHHHHHHHHHHHHHHHHHhcC----CCCCCcEEEEECC-----
Confidence 44211 133445555555554443 21 34555555555555554322221 2455666666442
Q ss_pred CchhhcccchHHHHHHHHHHHHCCeEeccCCC----cceEEeCCCcHHHHHHHHHHHHHH
Q 011856 415 NFEDAKKSETTKFARFYRGMLEEGVYFAPSQF----EAGFTSLAHSSDDIQHTITAAEKV 470 (476)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~----~~~~~~~~~t~e~i~~~~~~l~~~ 470 (476)
+ ..++++.|+++||.+.++.. +++|+++. ++++.++++++|+++
T Consensus 262 --------~---~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~~~-~~~~~~~l~~al~~~ 309 (311)
T PRK08354 262 --------D---AEKFVEFLKRNGILVRDCTSFGLPGYIRFSVR-DREENEKLIRALREW 309 (311)
T ss_pred --------C---HHHHHHHHHHCCeEEEecccCCCCCeEEEEeC-CHHHHHHHHHHHHHh
Confidence 1 15678889999999998742 45677766 455677777777764
No 197
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.91 E-value=3.7e-22 Score=198.36 Aligned_cols=296 Identities=12% Similarity=0.099 Sum_probs=184.3
Q ss_pred HHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCC
Q 011856 140 LENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPK 219 (476)
Q Consensus 140 ~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~ 219 (476)
...++.+.+++++ +.+.+++++||++++..++... ...++.|++....++.. ...+...|..
T Consensus 52 ~~~~~~e~lA~~~-g~~~~~i~~g~~~a~~~~~~~l--~~~gd~Vl~~~~~h~s~-~~~~~~~g~~-------------- 113 (370)
T TIGR02539 52 PIHDFLEDLAEFL-GMDEARVTHGAREGKFAVMHAL--CKEGDWVVLDGLAHYTS-YVAAERAGLN-------------- 113 (370)
T ss_pred HHHHHHHHHHHHh-CCCceEEECChHHHHHHHHHHh--hCCCCEEEECCcccHHH-HHHHHHcCCE--------------
Confidence 4567777788888 6678888999999999998842 23445555544444443 3333333432
Q ss_pred CCCCceeeccCC-------CHHHHHHHHhcC----CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEecc
Q 011856 220 GATYETLTAPFN-------DVSALENLFENN----KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEV 288 (476)
Q Consensus 220 ~~~~~~~~~~~~-------d~~~le~~l~~~----~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv 288 (476)
+..+|++ |+++|++.+++. .+++++|+++.++++.|.+.+ +++|.++|++||++||+||+
T Consensus 114 -----~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~----l~~i~~la~~~~~~livDea 184 (370)
T TIGR02539 114 -----VKEVPHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPD----AGKVAKVCREKGVPLLLNCA 184 (370)
T ss_pred -----EEEEecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccC----HHHHHHHHHHcCCeEEEECc
Confidence 2233332 899999998641 125677887777788899988 99999999999999999999
Q ss_pred ccCccccccchhhccCCCCchh--hhhhhcCCCCcEEEEEecHHHHHhhcCCCCccccCCC-----CCcHHHHHHHHHHH
Q 011856 289 MTGFRLAYGGAQEYFGVTPDLT--TLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTL-----SGNPLAMTAGIHTL 361 (476)
Q Consensus 289 ~~g~r~g~~~~~~~~g~~pDi~--t~sK~lg~G~~iG~~~~~~~i~~~l~~~~~~~~~~t~-----~~~~~~~aaa~aal 361 (476)
|.....+..+ ....+|++ +++|++++|.|+|++++++++++.+......+...+. .....++.++.+++
T Consensus 185 ~~~g~~~~~~----~~~~~di~v~s~sK~~~~~g~~G~l~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al 260 (370)
T TIGR02539 185 YTVGRMPVSA----KEIGADFIVGSGHKSMAASGPCGVLGMSEEWEDIVLRKSRYSPVKEVELLGCTSRGAPIVTMMASF 260 (370)
T ss_pred cccCCcCCCH----HHcCCCEEEeeCcccccCCCCEEEEEECHHHHhhhcccccCCccceeeeecccccccHHHHHHHHH
Confidence 9621111111 11235654 7999999777899999999999988753322111110 11123555666666
Q ss_pred HHhcC-CCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeE
Q 011856 362 KRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVY 440 (476)
Q Consensus 362 ~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~ 440 (476)
+...+ -+...+..++.++++++|+++..+. ....+....++.+.+... ......+......+.+.|+++||+
T Consensus 261 ~~~~~~l~~~~~~~~~~~~l~~~L~~~g~~~--~~~~~s~t~~v~~~~~~~-----~~~~~~~~~~~~~~~~~L~e~GI~ 333 (370)
T TIGR02539 261 PHVVERVKRWDEEVKKTRWFVAELEDIGFIQ--LGQKPKEHDLVKFETPGF-----HEIAQKHKRRGYFLYEELKKRGIH 333 (370)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCcEE--EccCCCcCceEEEECCch-----hHHhhhhccccHHHHHHHHhCCCc
Confidence 54322 1112233344567888887753211 001123455555543210 000001112235688999999998
Q ss_pred -eccCCCcceEEe-CCCcHHHHHHHHHHHHHHHHH
Q 011856 441 -FAPSQFEAGFTS-LAHSSDDIQHTITAAEKVKMR 473 (476)
Q Consensus 441 -~~~~~~~~~~~~-~~~t~e~i~~~~~~l~~~~~~ 473 (476)
++++....+|++ ..++++|+++++++|++++++
T Consensus 334 ~ir~~~~~~iRis~~~~t~e~i~~l~~~L~~~~~~ 368 (370)
T TIGR02539 334 GIRSGQTKYFKLSVYGLTKEQVEYVVDSFEEIVEE 368 (370)
T ss_pred cccCCcceEEEEEecCCCHHHHHHHHHHHHHHHHh
Confidence 776544567876 568999999999999998865
No 198
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.91 E-value=1e-21 Score=196.97 Aligned_cols=330 Identities=14% Similarity=0.112 Sum_probs=210.7
Q ss_pred CEEEecccChhhccCCCCcHHHHHHHHHHHHhc----CCC---CCCCHHHHHHHHHHHhhCC---CCCeEEEeCCHHHHH
Q 011856 99 NEYIDYVGSWGPAIIGHADDQVLAALGETMKKG----TSF---GAPCLLENVLAEMVISAVP---SIEMVRFVNSGTEAC 168 (476)
Q Consensus 99 ~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~----~~~---~~~~~~~~~la~~l~~~~~---~~e~v~~~~sGseA~ 168 (476)
..++||..+ ++-...++.+.+++.+.+... ..| .+..+++..+++.+.+.+. .++++++++|+++++
T Consensus 33 ~~~~~l~~g---~p~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~G~~~al 109 (394)
T PRK06836 33 DNVFDFSLG---NPSVPPPAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRRFGTPLTADHIVMTCGAAGAL 109 (394)
T ss_pred CCeEEecCc---CCCCCCCHHHHHHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHHHhCCCCCcCcEEEeCChHHHH
Confidence 356788776 332235788999888776542 112 1223566667777765432 578999999999999
Q ss_pred HHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCC-CCCCCCCCCceeeccCCCHHHHHHHHhcCCCCe
Q 011856 169 MGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDS-PGVPKGATYETLTAPFNDVSALENLFENNKGEI 247 (476)
Q Consensus 169 ~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~ 247 (476)
..+++.. ...++.|++.+++|.++.. .+...|..+...+.... .++ |++++++.++. ++
T Consensus 110 ~~~~~~l--~~~gd~Vli~~p~~~~~~~-~~~~~g~~v~~v~~~~~~~~~--------------d~~~l~~~~~~---~~ 169 (394)
T PRK06836 110 NVALKAI--LNPGDEVIVFAPYFVEYRF-YVDNHGGKLVVVPTDTDTFQP--------------DLDALEAAITP---KT 169 (394)
T ss_pred HHHHHHh--cCCCCEEEEcCCCCccHHH-HHHHcCCEEEEEecCCccCcC--------------CHHHHHhhcCc---Cc
Confidence 9998842 3455778888888877533 33344444333222111 111 78999998864 56
Q ss_pred EEEEEcccCCCCCcccCCHHHHHHHHHHHHH------hCCEEEEeccccCc-cccccchhhccCCCCchh---hhhhhcC
Q 011856 248 AAIILEPVVGNSGFIAPKPDFLNAIRRITKE------NGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLT---TLGKIIG 317 (476)
Q Consensus 248 a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~------~g~llI~DEv~~g~-r~g~~~~~~~~g~~pDi~---t~sK~lg 317 (476)
++|++...++++|.+.+.++ +++|.++|++ ||+++|+||+|.+| ..+.... ......++++ +|||.++
T Consensus 170 ~~v~~~~p~NPtG~~~~~~~-~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~-~~~~~~~~~i~~~S~SK~~~ 247 (394)
T PRK06836 170 KAVIINSPNNPTGVVYSEET-LKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVP-YIFKYYDNSIVVYSFSKSLS 247 (394)
T ss_pred eEEEEeCCCCCCCcCCCHHH-HHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCC-ChHHccCcEEEEecchhhcc
Confidence 67777666777888887666 9999999999 89999999999888 4332111 1111112332 7999999
Q ss_pred -CCCcEEEEEecHHHHHh---hcCCCCcc-ccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcC
Q 011856 318 -GGLPVGAYGGRRDIMEM---VAPAGPMY-QAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAG 392 (476)
Q Consensus 318 -~G~~iG~~~~~~~i~~~---l~~~~~~~-~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 392 (476)
+|+|+||+++++++.+. +....... ..+.++.+++.+.++...++ +....+.++++.+.+.+.|++. +
T Consensus 248 ~pGlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~---~~~~~~~~~~~r~~l~~~L~~~----g 320 (394)
T PRK06836 248 LPGERIGYIAVNPEMEDADDLVAALVFANRILGFVNAPALMQRVVAKCLD---ATVDVSIYKRNRDLLYDGLTEL----G 320 (394)
T ss_pred CcceeeEEEecCHHHhhhHHHHHHHHHHhhccccccCCHHHHHHHHHHhC---ChHHHHHHHHHHHHHHHHHHhC----C
Confidence 89999999998876432 11000000 11123556677776655553 2223445666666666666553 3
Q ss_pred CceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCC----CcceEEeCCCcHHHHHHHHHHHH
Q 011856 393 HAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ----FEAGFTSLAHSSDDIQHTITAAE 468 (476)
Q Consensus 393 ~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~----~~~~~~~~~~t~e~i~~~~~~l~ 468 (476)
+....+..|.++++.+... ...++++.|.++||.+.++. .+.+|+++..+++++++++++|+
T Consensus 321 ~~~~~~~gg~~~~~~~~~~--------------~~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~~~~~~~~~~~~i~~l~ 386 (394)
T PRK06836 321 FECVKPQGAFYLFPKSPEE--------------DDVAFCEKAKKHNLLLVPGSGFGCPGYFRLSYCVDTETIERSLPAFE 386 (394)
T ss_pred CEeecCCceEEEEEeCCCC--------------CHHHHHHHHHhCCEEEECchhcCCCCeEEEEecCCHHHHHHHHHHHH
Confidence 3222233456666655221 12467788889999999873 24678887789999999999999
Q ss_pred HHHHHh
Q 011856 469 KVKMRF 474 (476)
Q Consensus 469 ~~~~~~ 474 (476)
+++++.
T Consensus 387 ~~l~~~ 392 (394)
T PRK06836 387 KLAKEY 392 (394)
T ss_pred HHHHHh
Confidence 998764
No 199
>PLN02721 threonine aldolase
Probab=99.91 E-value=5.4e-22 Score=196.44 Aligned_cols=333 Identities=17% Similarity=0.145 Sum_probs=198.2
Q ss_pred EEEecccChhhccCCCCcHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhcc
Q 011856 100 EYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFT 179 (476)
Q Consensus 100 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~~~~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~ 179 (476)
+++||.++..+ ..+|.+.+++.+. .......++.+...+|.+.+++++ +.+.++++++|++++..++... ..
T Consensus 6 ~~~~~~~~~~~----~~~~~~~~a~~~~-~~~~~~~~~~~~~~~l~~~la~~~-~~~~~~~~~~Gs~a~~~~l~~~--~~ 77 (353)
T PLN02721 6 RVVDLRSDTVT----KPTDAMRAAMANA-EVDDDVLGYDPTALRLEEEMAKIF-GKEAALFVPSGTMGNLISVLVH--CD 77 (353)
T ss_pred hhhhhhccccc----CCCHHHHHHHHhc-cCCCcccCCCHHHHHHHHHHHHHh-CCceeEEecCccHHHHHHHHHH--cc
Confidence 46788888433 3689999998764 111112234555678888888888 5566889999999998888742 22
Q ss_pred -CCceEEEEeCCCCCCchh--HHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCC----CCeEEEEE
Q 011856 180 -GRERIIKFEGCYHGHADP--FLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK----GEIAAIIL 252 (476)
Q Consensus 180 -~~~~ii~~~~~yhg~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~----~~~a~vi~ 252 (476)
+++.|++.+++|...... .....|..+... +..... ..|++++++.+++.. +++++|++
T Consensus 78 ~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v--~~~~~~------------~~d~~~l~~~i~~~~~~~~~~~~~v~l 143 (353)
T PLN02721 78 VRGSEVILGDNSHIHLYENGGISTLGGVHPRTV--KNNEDG------------TMDLDAIEAAIRPKGDDHFPTTRLICL 143 (353)
T ss_pred CCCCeEEEcCccceehhcccchhhhcCceeEec--CCCcCC------------CcCHHHHHHHHHhccCCCCCcceEEEE
Confidence 567788888776433321 222223322211 110000 027999999997421 36788888
Q ss_pred cccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCccccc-cchhhccCCCCc--hhhhhhhcCCCCcEEE-EEec
Q 011856 253 EPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY-GGAQEYFGVTPD--LTTLGKIIGGGLPVGA-YGGR 328 (476)
Q Consensus 253 ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~-~~~~~~~g~~pD--i~t~sK~lg~G~~iG~-~~~~ 328 (476)
++++++.|....+.+++++|.++|++||++||+||+|.-..... ...........| ++++||++++ |+|+ ++++
T Consensus 144 ~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~--~~G~~~~~~ 221 (353)
T PLN02721 144 ENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGVPVHRLVKAADSVSVCLSKGLGA--PVGSVIVGS 221 (353)
T ss_pred eccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCCCHHHHhhhCCEEEEecccccCC--ceeeEEecC
Confidence 88776644444455569999999999999999999984111000 000111111223 3479999974 6776 5788
Q ss_pred HHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCce-EeeeeceeEEEE
Q 011856 329 RDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAI-CGGYISGMFGFF 407 (476)
Q Consensus 329 ~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~v~~~g~~~~i~ 407 (476)
+++++.+........ ++.......+++++.+++.. .+..++..++.+++.+.|+++. ++.. .....+.++++.
T Consensus 222 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~l~~~L~~~~---~~~~~~~~~~~~~~~~~ 295 (353)
T PLN02721 222 KSFIRKAKRLRKTLG-GGMRQVGVLAAAALVALQEN--VPKLEDDHKKAKLLAEGLNQIK---GLRVNVAAVETNIVYFD 295 (353)
T ss_pred HHHHHhHHHHHHhcC-CCeehhHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHhCC---CcEEecCCccceEEEEE
Confidence 888876542111111 11111122233344444321 1123344556667777776541 1211 112345667776
Q ss_pred EecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCCcceEEe--CCCcHHHHHHHHHHHHHHHHH
Q 011856 408 FTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFTS--LAHSSDDIQHTITAAEKVKMR 473 (476)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~~--~~~t~e~i~~~~~~l~~~~~~ 473 (476)
+.... ......+++.|.++||.+.+.....+|++ +.++++|+++++++|++++..
T Consensus 296 ~~~~~-----------~~~~~~~~~~L~~~gi~v~~~~~~~lR~~~~~~~~~~~i~~~~~~l~~~~~~ 352 (353)
T PLN02721 296 ITDGS-----------RITAEKLCKSLEEHGVLLMPGNSSRIRVVTHHQISDSDVQYTLSCFQQAALT 352 (353)
T ss_pred ccCCc-----------cccHHHHHHHHHhCCcEEecCCCceEEEEecCcCCHHHHHHHHHHHHHHhhc
Confidence 63210 01235788999999999999877777775 467999999999999988754
No 200
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.91 E-value=4e-22 Score=200.62 Aligned_cols=319 Identities=14% Similarity=0.112 Sum_probs=203.2
Q ss_pred ChhhccCCCCcHHHHHHHHHHHHhc-CCCCC--------CCHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHHH
Q 011856 107 SWGPAIIGHADDQVLAALGETMKKG-TSFGA--------PCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLAR 176 (476)
Q Consensus 107 ~~~~~~lG~~~p~v~~a~~~~l~~~-~~~~~--------~~~~~~~la~~l~~~~~-~~e~v~~~~sGseA~~~al~~ar 176 (476)
+.+....||++|.+++++..+. .. +.+.. ..++..++++++++.++ +.+.+.++++|+++.+.++..++
T Consensus 24 ~l~~g~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~~~~v~~~~~g~~~~~~~~~~~~ 102 (398)
T cd00613 24 FLGSGTYKHNPPAVIKRNILEN-EFYTAYTPYQPEISQGRLQALFELQTMLCELTGMDVANASLQDEATAAAEAAGLAAI 102 (398)
T ss_pred cccccccCCcCcHHHHHHhccc-cCcccCCCCChhhhhhHHHHHHHHHHHHHHHHCCCccceeccCchHHHHHHHHHHHH
Confidence 4444678999999888877666 32 12221 23567889999998885 34478888878877777777665
Q ss_pred hccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccC-----CCHHHHHHHHhcCCCCeEEEE
Q 011856 177 AFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPF-----NDVSALENLFENNKGEIAAII 251 (476)
Q Consensus 177 ~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~~~a~vi 251 (476)
...++++.|++...+|+.+...+...+... + .++..+++ .|++++++.+.. ++++|+
T Consensus 103 ~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~---------g------~~~~~v~~~~~~~~d~~~l~~~i~~---~t~~vi 164 (398)
T cd00613 103 RAYHKRNKVLVPDSAHPTNPAVARTRGEPL---------G------IEVVEVPSDEGGTVDLEALKEEVSE---EVAALM 164 (398)
T ss_pred hcccCCCEEEEcCccCcchHHHHHHhcccC---------C------cEEEEeccCCCCCcCHHHHHHhcCC---CeEEEE
Confidence 443334555566778988877776655210 0 01222222 168889888853 688888
Q ss_pred EcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccchhhccCCCCchh--hhhhhcC----CCCcEEE
Q 011856 252 LEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLT--TLGKIIG----GGLPVGA 324 (476)
Q Consensus 252 ~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pDi~--t~sK~lg----~G~~iG~ 324 (476)
+++++ ++|.+. +++++|+++|++||++||+|++|... ..... ..+ .+|++ +++|.+. ||+++|+
T Consensus 165 v~~~~-~~G~~~---~~l~~i~~la~~~g~~livD~~~~~~~~~~~~---~~~--~~d~~~~s~~K~~~p~g~Ggp~~g~ 235 (398)
T cd00613 165 VQYPN-TLGVFE---DLIKEIADIAHSAGALVYVDGDNLNLTGLKPP---GEY--GADIVVGNLQKTGVPHGGGGPGAGF 235 (398)
T ss_pred EECCC-CCceec---chHHHHHHHHHhcCCEEEEEeccccccCCCCh---HHc--CCCEEEeeccccCCCCCCCCCceeE
Confidence 88865 567773 44799999999999999999998522 11111 112 36776 4678762 3678999
Q ss_pred EEecHHHHHhhcCCC-----------C---------------ccccCCCCCcHHHHHHHHHHHHHhcC---CCHHHHHHH
Q 011856 325 YGGRRDIMEMVAPAG-----------P---------------MYQAGTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNK 375 (476)
Q Consensus 325 ~~~~~~i~~~l~~~~-----------~---------------~~~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~ 375 (476)
++.++++++.+.... . .....+++++++.++++.++++.+.+ +++.+++++
T Consensus 236 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~~~~g~~~~~~~~~~ 315 (398)
T cd00613 236 FAVKKELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYLGPEGLKEIAERAHL 315 (398)
T ss_pred EEEhhhhHhhCCCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 999988887653210 0 01123456667777777777776644 345688888
Q ss_pred HHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccC---CCcceEE-
Q 011856 376 ITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPS---QFEAGFT- 451 (476)
Q Consensus 376 ~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~---~~~~~~~- 451 (476)
++++++++|+++.... .+.. .....+.+.+... ......++.+.|+++||++... ....+|+
T Consensus 316 ~~~~l~~~L~~~~~~~-~~~~--~~~~~v~~~~~~~-----------~~~~~~~~~~~L~~~gi~~~~~~~~~~~~lRis 381 (398)
T cd00613 316 NANYLAKRLKEVGGVL-PFNG--PFFHEFVLRLPPL-----------YGIRAEDLAKALIDGGFHAPTMYLPVDGTLMIE 381 (398)
T ss_pred HHHHHHHHHHhcCCcc-cCCC--CeeEEEEEEcCCc-----------chHHHHHHHHhhhhcCccccccccCCCCeEEEE
Confidence 9999999888763221 1100 1111223332110 0123467889999999987653 3345666
Q ss_pred -eCCCcHHHHHHHHHHH
Q 011856 452 -SLAHSSDDIQHTITAA 467 (476)
Q Consensus 452 -~~~~t~e~i~~~~~~l 467 (476)
+..+|++|||++++.|
T Consensus 382 ~~~~~t~edid~~~~~L 398 (398)
T cd00613 382 PTETETKEELDALLEAL 398 (398)
T ss_pred cCCCCCHHHHHHHHHhC
Confidence 5788999999999864
No 201
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.91 E-value=1e-21 Score=200.74 Aligned_cols=303 Identities=13% Similarity=0.075 Sum_probs=188.8
Q ss_pred CHHHHHHHHHHHhhCC-----CCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCC
Q 011856 138 CLLENVLAEMVISAVP-----SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLP 212 (476)
Q Consensus 138 ~~~~~~la~~l~~~~~-----~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~ 212 (476)
.+++.++++++.+..+ .+++|++++|+++|++.+++.. ..+++.|++.++.|.+....+....|..+..++..
T Consensus 97 ~~LR~aiA~~l~~~~g~~v~v~pe~Ivit~Ga~~al~~l~~~l--~~pGD~Vlv~~P~Y~~~~~~~~~~~G~~vv~v~~~ 174 (496)
T PLN02376 97 KKFRQAIAHFMGKARGGKVTFDPERVVMSGGATGANETIMFCL--ADPGDVFLIPSPYYAAFDRDLRWRTGVEIIPVPCS 174 (496)
T ss_pred HHHHHHHHHHHHHHhCCCCcCChhhEEEccchHHHHHHHHHHh--CCCCCEEEECCCCccchHHHHHhhCCCEEEEEeCC
Confidence 5678888888876532 5789999999999999999842 34557788888888885433322345544332221
Q ss_pred CCCCCCCCCCCceeeccCCCHHHHHHHHhc---CCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccc
Q 011856 213 DSPGVPKGATYETLTAPFNDVSALENLFEN---NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM 289 (476)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~d~~~le~~l~~---~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~ 289 (476)
...+. . -|++++++.+++ ...++++|++...+|++|.+.+.++ +++|.++|++||++||+||+|
T Consensus 175 ~~~~~---------~---~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~-l~~L~~~a~~~~i~lI~DEiY 241 (496)
T PLN02376 175 SSDNF---------K---LTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDT-LTNLVRFVTRKNIHLVVDEIY 241 (496)
T ss_pred CCccC---------c---CCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHH-HHHHHHHHHHcCCEEEEEcCc
Confidence 11110 0 167888766532 1235666666555667888776555 999999999999999999999
Q ss_pred cCc-cccccch--hhc---cC---CCCc----hhhhhhhcC-CCCcEEEEEe-cHHHHHhhcCCCCccccCCCCCcHHHH
Q 011856 290 TGF-RLAYGGA--QEY---FG---VTPD----LTTLGKIIG-GGLPVGAYGG-RRDIMEMVAPAGPMYQAGTLSGNPLAM 354 (476)
Q Consensus 290 ~g~-r~g~~~~--~~~---~g---~~pD----i~t~sK~lg-~G~~iG~~~~-~~~i~~~l~~~~~~~~~~t~~~~~~~~ 354 (476)
..+ ..+..+. .+. ++ ..++ +.+|||.+| +|+|+||+++ ++.+.+.++. .. .....+.+++
T Consensus 242 ~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~~~l~~~~~~---~~--~~~~vs~~~Q 316 (496)
T PLN02376 242 AATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFNDSVVSCARK---MS--SFGLVSSQTQ 316 (496)
T ss_pred cccccCCCCcccHHHhhccccccccCCCeEEEEEeccccCCCCcceEEEEEECCHHHHHHHHH---Hh--hcCCCCHHHH
Confidence 876 4432221 111 11 1234 237999998 8999999998 4666665442 11 1123567777
Q ss_pred HHHHHHHHHhcCCCH--------HHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHH
Q 011856 355 TAGIHTLKRLKEPGT--------YEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTK 426 (476)
Q Consensus 355 aaa~aal~~~~~~~~--------~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ 426 (476)
.++.+.|+ ++++ +++++++.+.+.+.|++ .++....+..|+++|+.+...-.. ....+.
T Consensus 317 ~a~~~~L~---d~~~~~~~l~~~r~~l~~r~~~l~~~L~~----~gi~~~~~~aG~flwi~l~~~~~~------~~~~~~ 383 (496)
T PLN02376 317 LMLASMLS---DDQFVDNFLMESSRRLGIRHKVFTTGIKK----ADIACLTSNAGLFAWMDLRHLLRD------RNSFES 383 (496)
T ss_pred HHHHHHhC---ChhHHHHHHHHHHHHHHHHHHHHHHHHHH----CCCcccCCCceEEEEEEchhhhcc------CCchhH
Confidence 77766664 3333 22333333344444433 343322345678888888431100 001112
Q ss_pred HHHHHHHHHH-CCeEeccCC------CcceEEeCC-CcHHHHHHHHHHHHHHHHH
Q 011856 427 FARFYRGMLE-EGVYFAPSQ------FEAGFTSLA-HSSDDIQHTITAAEKVKMR 473 (476)
Q Consensus 427 ~~~~~~~l~~-~Gv~~~~~~------~~~~~~~~~-~t~e~i~~~~~~l~~~~~~ 473 (476)
..++++.+++ .||.+.|+. .+.+|+++. .+++++++++++|++++.+
T Consensus 384 e~~l~~~ll~~~gV~v~pGs~F~~~~~g~~Ri~fa~~~~~~l~~al~rl~~~l~~ 438 (496)
T PLN02376 384 EIELWHIIIDKVKLNVSPGSSFRCTEPGWFRICFANMDDDTLHVALGRIQDFVSK 438 (496)
T ss_pred HHHHHHHHHHcCCEEEeCccccCCCCCCEEEEEeeCCCHHHHHHHHHHHHHHHHH
Confidence 2467777776 599999873 235788887 5889999999999998853
No 202
>PRK07908 hypothetical protein; Provisional
Probab=99.90 E-value=1.2e-21 Score=193.30 Aligned_cols=313 Identities=13% Similarity=0.123 Sum_probs=196.9
Q ss_pred CCEEEecccChhhccCCCCcHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHHH
Q 011856 98 GNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLAR 176 (476)
Q Consensus 98 G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~~~~~~~~~~la~~l~~~~~-~~e~v~~~~sGseA~~~al~~ar 176 (476)
+..++||..|. +.++ .++.+.+++.+.+.....|. +.....+|.+.++++++ .+++|++|+|+++++..+++
T Consensus 21 ~~~~~~l~~~~--~~~~-~~~~~~~~~~~~~~~~~~Y~-~~~g~~~lr~aia~~~~~~~~~I~it~Ga~~al~~~~~--- 93 (349)
T PRK07908 21 GPGLLDFAVNV--RHDT-PPEWLRERLAARLGDLAAYP-STEDERRARAAVAARHGRTPDEVLLLAGAAEGFALLAR--- 93 (349)
T ss_pred CCCeEEecCCC--CCCC-CCHHHHHHHHHHhhHhhcCC-CccchHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHh---
Confidence 56899998874 3344 68889999998876532232 12344567777777776 67899999999999998877
Q ss_pred hccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccC
Q 011856 177 AFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVV 256 (476)
Q Consensus 177 ~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~ 256 (476)
+ .++++++..++|.... ..+...|..+...+.....++ |++++ ++ +++++++...+
T Consensus 94 -l-~~~~viv~~P~y~~~~-~~~~~~G~~i~~v~~~~~~~~--------------d~~~l----~~---~~~~i~l~np~ 149 (349)
T PRK07908 94 -L-RPRRAAVVHPSFTEPE-AALRAAGIPVHRVVLDPPFRL--------------DPAAV----PD---DADLVVIGNPT 149 (349)
T ss_pred -c-CCCeEEEeCCCChHHH-HHHHHcCCEEEeeccCcccCc--------------ChhHh----cc---CCCEEEEcCCC
Confidence 2 2367777788886643 333344543332221110011 44433 22 45566665556
Q ss_pred CCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCccccccchhhccCCCCchh---hhhhhcC-CCCcEEEEEecHHHH
Q 011856 257 GNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLT---TLGKIIG-GGLPVGAYGGRRDIM 332 (476)
Q Consensus 257 ~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pDi~---t~sK~lg-~G~~iG~~~~~~~i~ 332 (476)
|++|.+.+ .++|.++|++ +.++|+||+|..|..+........+ .++++ +|||.++ +|+|+||++++++++
T Consensus 150 NPTG~~~~----~~~l~~l~~~-~~~iIvDe~y~~~~~~~~~~l~~~~-~~~~i~i~S~SK~~~l~GlRiG~~~~~~~~~ 223 (349)
T PRK07908 150 NPTSVLHP----AEQLLALRRP-GRILVVDEAFADAVPGEPESLAGDD-LPGVLVLRSLTKTWSLAGLRVGYALGAPDVL 223 (349)
T ss_pred CCCCCCcC----HHHHHHHHhc-CCEEEEECcchhhccCCcccccccc-CCCEEEEeecccccCCccceeeeeecCHHHH
Confidence 77888888 5677888864 7788899999876222211111111 12333 7899999 899999999999999
Q ss_pred HhhcCCCCccccCCCCCcHHHHHHHHHHHHHh--cC-CCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEe
Q 011856 333 EMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRL--KE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFT 409 (476)
Q Consensus 333 ~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~--~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~ 409 (476)
+.+.+.. ..+..+++.++++.+.++.. +. ++.+++++++.+++.+.|++. ++....+..|.++++.+.
T Consensus 224 ~~~~~~~-----~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~----~~~~~~p~~g~~~~~~~~ 294 (349)
T PRK07908 224 ARLTRGR-----AHWPVGTLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRAV----GARVVDPAAAPFVLVRVP 294 (349)
T ss_pred HHHHhcC-----CCCCccHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhC----CcEeccCCCceEEEEECC
Confidence 9886421 12445566666555444310 00 223444555555555555443 332222356888888763
Q ss_pred cCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCC------CcceEEeCCCcHHHHHHHHHHHHHHHHH
Q 011856 410 EGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ------FEAGFTSLAHSSDDIQHTITAAEKVKMR 473 (476)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~------~~~~~~~~~~t~e~i~~~~~~l~~~~~~ 473 (476)
+ ...+.+.|.++||.+.++. .+++|+++ .+++++++++++|++++..
T Consensus 295 ~----------------~~~~~~~l~~~gI~v~~g~~f~~~~~~~vRis~-~~~~~~~~l~~al~~~~~~ 347 (349)
T PRK07908 295 D----------------AELLRKRLRERGIAVRRGDTFPGLDPDYLRLAV-RPRAEVPVLVQALAEILKA 347 (349)
T ss_pred c----------------HHHHHHHHHhCCEEEEECCCCCCCCCCeEEEEe-CCCccHHHHHHHHHHHHhc
Confidence 1 1467788889999998863 24678887 4788999999999988653
No 203
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.90 E-value=1.9e-21 Score=196.67 Aligned_cols=339 Identities=13% Similarity=0.110 Sum_probs=204.9
Q ss_pred EEEecccChhhccCCCCcHHHHHHHHHHHHh-------------cCCC---CCCCHHHHHHHHHHHhhCC-----CCCeE
Q 011856 100 EYIDYVGSWGPAIIGHADDQVLAALGETMKK-------------GTSF---GAPCLLENVLAEMVISAVP-----SIEMV 158 (476)
Q Consensus 100 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~-------------~~~~---~~~~~~~~~la~~l~~~~~-----~~e~v 158 (476)
-+|++...- |.| .+..+.+.+.+..+. ...| .+..+++.++++.+.+.++ .+++|
T Consensus 48 g~i~l~~ae--N~l--~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~~~~~~v~p~~I 123 (447)
T PLN02607 48 GVIQMGLAE--NQV--SFDLLEEYLKQHPEASSWGGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGKARFDPDRI 123 (447)
T ss_pred ceEEEechh--hhh--hHHHHHHHHHhCchhhccccccccccchhhccCCCcchHHHHHHHHHHHHHhcCCCCCcCHHHe
Confidence 377766553 323 456677666654321 0111 2345777888888877542 56899
Q ss_pred EEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHH
Q 011856 159 RFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALEN 238 (476)
Q Consensus 159 ~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~ 238 (476)
++++|+++|++.++.. ....++.|++..+.|.+.........|..+..++.....++ .-|++++++
T Consensus 124 vit~G~t~al~~l~~~--l~~pGD~Vlv~~P~Y~~f~~~~~~~~g~~vv~v~~~~~~~f------------~~~~~~le~ 189 (447)
T PLN02607 124 VLTAGATAANELLTFI--LADPGDALLVPTPYYPGFDRDLRWRTGVKIVPIHCDSSNNF------------QVTPQALEA 189 (447)
T ss_pred EEcCChHHHHHHHHHH--hCCCCCEEEEcCCCCcchHHHHHhcCCcEEEEEeCCCCCCC------------cCCHHHHHH
Confidence 9999999999998773 23456778888888877644332233443332221111110 017889998
Q ss_pred HHhc---CCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccch--hhc---cCC-C-C
Q 011856 239 LFEN---NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGA--QEY---FGV-T-P 307 (476)
Q Consensus 239 ~l~~---~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~--~~~---~g~-~-p 307 (476)
++++ .+.+++++++...+|++|.+.+.+ .+++|.++|++|+++||+||+|.++ ..+..+. .+. .+. . +
T Consensus 190 a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e-~l~~l~~~~~~~~i~lI~DEiYa~~~f~~~~f~S~~s~~~~~~~~~~~ 268 (447)
T PLN02607 190 AYQEAEAANIRVRGVLITNPSNPLGATVQRS-VLEDILDFVVRKNIHLVSDEIYSGSVFSASEFVSVAEIVEARGYKGVA 268 (447)
T ss_pred HHHHHHHhCCCeeEEEEeCCCCCcCcccCHH-HHHHHHHHHHHCCCEEEEeccccccccCCCCcccHHHHHhhcCCCCCc
Confidence 8864 123566666654556677776644 4999999999999999999999875 3322111 111 111 1 2
Q ss_pred c-h---hhhhhhcC-CCCcEEEEEe-cHHHHHhhcCCCCccccCCC-CCcHHHHHHHHHHHHHhcCCCHH-HHHHHHHHH
Q 011856 308 D-L---TTLGKIIG-GGLPVGAYGG-RRDIMEMVAPAGPMYQAGTL-SGNPLAMTAGIHTLKRLKEPGTY-EYLNKITGE 379 (476)
Q Consensus 308 D-i---~t~sK~lg-~G~~iG~~~~-~~~i~~~l~~~~~~~~~~t~-~~~~~~~aaa~aal~~~~~~~~~-~~~~~~~~~ 379 (476)
+ + .+|||.+| +|+|+||+++ ++++++.++. . ..+ +.+.+++.++.+.|+ ++++. +.+.++.++
T Consensus 269 ~~v~vi~s~SK~fg~~GlRvG~ivs~n~~l~~~~~~---~---~~~~~~s~~~q~~~~~~L~---d~~~~~~~l~~~r~~ 339 (447)
T PLN02607 269 ERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARR---M---SSFTLVSSQTQHLLASMLS---DEEFTENYIRTNRER 339 (447)
T ss_pred CcEEEEEcchhcCCCCcceEEEEEEcCHHHHHHHHH---H---hhcCCCCHHHHHHHHHHhC---CchhHHHHHHHHHHH
Confidence 3 2 27999999 8999999988 6777776652 1 122 345666666655553 33332 223333333
Q ss_pred HHH---HHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHH-CCeEeccCC------Ccce
Q 011856 380 LTQ---GIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLE-EGVYFAPSQ------FEAG 449 (476)
Q Consensus 380 l~~---~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~~------~~~~ 449 (476)
+++ .+.+.+.++++.......|.++|+.+...- ..+..+...++++.+++ +||.+.|+. .+.+
T Consensus 340 l~~~~~~~~~~L~~~gi~~~~~~ag~fvw~~L~~~~-------~~~~~~~e~~l~~~ll~~~gV~v~pG~~f~~~~~g~f 412 (447)
T PLN02607 340 LRKRYEMIVQGLRRAGIECLKGNAGLFCWMNLSPLL-------ETPTREGELALWDSILREVKLNISPGSSCHCSEPGWF 412 (447)
T ss_pred HHHHHHHHHHHHHhCCCCcccCCeeEEEEEEchHhh-------cCCCchhHHHHHHHHHHhCCEEEcCccccCCCCCCEE
Confidence 322 222333334443333456888998884310 00111222466767765 699999874 2357
Q ss_pred EEeCCC-cHHHHHHHHHHHHHHHHH
Q 011856 450 FTSLAH-SSDDIQHTITAAEKVKMR 473 (476)
Q Consensus 450 ~~~~~~-t~e~i~~~~~~l~~~~~~ 473 (476)
|+++.. +++++++++++|.+++++
T Consensus 413 Ri~fa~~~~~~l~~gl~Ri~~~l~~ 437 (447)
T PLN02607 413 RVCFANMSEDTLEVALKRIHRFMDR 437 (447)
T ss_pred EEEeccCCHHHHHHHHHHHHHHHHH
Confidence 888885 899999999999998864
No 204
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.90 E-value=4.8e-22 Score=199.89 Aligned_cols=335 Identities=16% Similarity=0.119 Sum_probs=195.6
Q ss_pred CCEEEecccChhhccCCCCcHHHHHHHHHHHHhc----CCCCC-C----CHHHHHHHHHHHhhCCCCCeEEEeCCHHHHH
Q 011856 98 GNEYIDYVGSWGPAIIGHADDQVLAALGETMKKG----TSFGA-P----CLLENVLAEMVISAVPSIEMVRFVNSGTEAC 168 (476)
Q Consensus 98 G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~----~~~~~-~----~~~~~~la~~l~~~~~~~e~v~~~~sGseA~ 168 (476)
+..++|+..|. ..++ .+|.+.+++.+.+.+. ...+| + .+++.++++.+.+..-.+++|++++|+++++
T Consensus 32 ~~~~i~l~~~~--~~~~-~~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~aia~~~~~~~~~~d~I~it~Ga~~al 108 (402)
T TIGR03542 32 SADIIRLGIGD--TTQP-LPASVIEAFHNAVDELASEETFRGYGPEQGYPFLREAIAENDYRGRIDPEEIFISDGAKCDV 108 (402)
T ss_pred CCCeEEcCCCC--CCCC-CCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHhcCCCHHHEEECCCcHHHH
Confidence 45678887773 2233 4788899988887653 11222 3 3444555554322112678999999999999
Q ss_pred HHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCC-CCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCe
Q 011856 169 MGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGS-GVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEI 247 (476)
Q Consensus 169 ~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~ 247 (476)
...+. .+.+++.|++.+++|.++...+. ..|. ++.. ..+. ...+..++.++-+.+...+.+. .++
T Consensus 109 ~~l~~---l~~~gd~Vlv~~P~y~~~~~~~~-~~g~~~~~~-----~~~~----~~~~~~v~~~~~~~~~~~~~~~-~~~ 174 (402)
T TIGR03542 109 FRLQS---LFGSDNTVAVQDPVYPAYVDSNV-MAGRAGVLD-----DDGR----YSKITYLPCTKENNFIPDLPEE-PKI 174 (402)
T ss_pred HHHHH---hcCCCCEEEEeCCCCcchHHHHH-HcCCccccc-----cccc----cceEEEeecchhhCCCCCcccc-CCc
Confidence 87544 34566789999999988654443 3333 1110 0000 0012223321100010001111 245
Q ss_pred EEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccc-cch-hhccC---CCCchhhhhhhcC-CCC
Q 011856 248 AAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAY-GGA-QEYFG---VTPDLTTLGKIIG-GGL 320 (476)
Q Consensus 248 a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~-~~~-~~~~g---~~pDi~t~sK~lg-~G~ 320 (476)
++|++...+|++|.+.+.++ +++|.++|++||++||+||+|..| ..+. ... ....+ ....+.+|||.+| +|+
T Consensus 175 ~~i~l~nP~NPTG~~~s~~~-~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~pGl 253 (402)
T TIGR03542 175 DIIYLCSPNNPTGTVLTKEQ-LKELVDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPGAKECAIEFRSFSKTAGFTGV 253 (402)
T ss_pred eEEEEeCCCCCCCccCCHHH-HHHHHHHHHHcCeEEEEEchhhhhccCCCCCcchhhCCCCcccEEEEecCccccCCCCc
Confidence 66666556677888776555 999999999999999999999888 4332 111 11111 1112338999998 899
Q ss_pred cEEEEEecHHHH--------HhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHHHHHHhh
Q 011856 321 PVGAYGGRRDIM--------EMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGK 389 (476)
Q Consensus 321 ~iG~~~~~~~i~--------~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~ 389 (476)
|+||++++++++ +.+.. .......+.+.+++.++.+.++.-.. .+..+.++++.+.+.+.|++
T Consensus 254 RiG~~i~~~~l~~~~~~~~~~~~~~---~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~--- 327 (402)
T TIGR03542 254 RLGWTVVPKELTYADGHSVIQDWER---RQCTKFNGASYPVQRAAEAAYAGEGLQPILEAISYYMENARILRKALEA--- 327 (402)
T ss_pred ceEEEEecHHHhhcchhhHHHHHHH---HhhhcccCCCHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHh---
Confidence 999999998876 22210 00111224577788777666642110 11233344455555555544
Q ss_pred hcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHH-HCCeEeccCC------CcceEEeCCCcHHHHHH
Q 011856 390 KAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ------FEAGFTSLAHSSDDIQH 462 (476)
Q Consensus 390 ~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~------~~~~~~~~~~t~e~i~~ 462 (476)
+++....+..|.++++.+... ....++...|+ ++||.+.++. .+.+|+++..+++++++
T Consensus 328 -~~~~~~~~~~~~f~~v~l~~~-------------~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~l~~ 393 (402)
T TIGR03542 328 -AGFKVYGGEHAPYLWVKTPEG-------------ISSWDFFDFLLYQYHVVGTPGSGFGPSGEGFVRFSAFGKRENIVE 393 (402)
T ss_pred -cCceecCCCceeEEEEECCCC-------------CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecCCHHHHHH
Confidence 332211122566888887421 01246777777 5699999863 24578887779999999
Q ss_pred HHHHHHHH
Q 011856 463 TITAAEKV 470 (476)
Q Consensus 463 ~~~~l~~~ 470 (476)
++++|+++
T Consensus 394 ~l~~l~~~ 401 (402)
T TIGR03542 394 ACERIKEA 401 (402)
T ss_pred HHHHHHhh
Confidence 99999875
No 205
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.90 E-value=4.4e-22 Score=195.84 Aligned_cols=319 Identities=18% Similarity=0.146 Sum_probs=200.2
Q ss_pred ecccChhhccCCCCcHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCc
Q 011856 103 DYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRE 182 (476)
Q Consensus 103 D~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~~~~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~ 182 (476)
||++. +++| .+|.+.+++.+.+.... ..++.....++.+.++++++ .++++++++|++++..+++.. ..+++
T Consensus 1 ~~~~~---~~~~-~~~~v~~a~~~~~~~~~-~~~~~~~~~~l~~~~a~~~g-~~~~~~~~~gt~a~~~~~~~l--~~~gd 72 (338)
T cd06502 1 DFRSD---TVTG-PTPEMLEAMAAANVGDD-VYGEDPTTAKLEARAAELFG-KEAALFVPSGTAANQLALAAH--TQPGG 72 (338)
T ss_pred Ccccc---cCCC-CCHHHHHHHHhcccCCc-ccCCCHHHHHHHHHHHHHhC-CCeEEEecCchHHHHHHHHHh--cCCCC
Confidence 67777 8888 88999999988654322 23467778899999999985 778999999999999999842 23445
Q ss_pred eEEEEeCCCCCCchh---HHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCC----CCeEEEEEccc
Q 011856 183 RIIKFEGCYHGHADP---FLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK----GEIAAIILEPV 255 (476)
Q Consensus 183 ~ii~~~~~yhg~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~----~~~a~vi~ep~ 255 (476)
.|++ ....|..... .....|..+...+.. .+ ..|+++|++++++.. +++++|+++++
T Consensus 73 ~v~~-~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~-------------~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p 136 (338)
T cd06502 73 SVIC-HETAHIYTDEAGAPEFLSGVKLLPVPGE--NG-------------KLTPEDLEAAIRPRDDIHFPPPSLVSLENT 136 (338)
T ss_pred eEEE-ecCcceeeecCCcHHHHcCceEEeecCC--CC-------------cCCHHHHHHHhhccCCCcCCcceEEEEEee
Confidence 5554 4444443221 112233332221110 00 128999999987521 24677777665
Q ss_pred CCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc---cccccchhhccCCCCchh--hhhhhcCCCCcEEEE-EecH
Q 011856 256 VGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF---RLAYGGAQEYFGVTPDLT--TLGKIIGGGLPVGAY-GGRR 329 (476)
Q Consensus 256 ~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~---r~g~~~~~~~~g~~pDi~--t~sK~lg~G~~iG~~-~~~~ 329 (476)
+++|| +. +.+.+++|.++|++||++||+||+|..+ ..+. ........+|++ +++|.++. +.|++ ++++
T Consensus 137 ~n~g~-~~-~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~~--~~~~~~~~~d~~~~s~sK~~~~--~~g~~~~~~~ 210 (338)
T cd06502 137 TEGGT-VY-PLDELKAISALAKENGLPLHLDGARLANAAAALGV--ALKTYKSGVDSVSFCLSKGGGA--PVGAVVVGNR 210 (338)
T ss_pred cCCcc-cc-CHHHHHHHHHHHHHcCCeEeechHHHHHHHHhcCC--CHHHHHhcCCEEEEeccccCCC--ccceEEECCH
Confidence 55544 44 4455999999999999999999998422 1121 112222345554 68999973 34554 6788
Q ss_pred HHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEe
Q 011856 330 DIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFT 409 (476)
Q Consensus 330 ~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~ 409 (476)
++++.+..... .+.++++.+++.++++.++|+.-...+..+++.++.+++.+.|+++... .....+.++.+.+.
T Consensus 211 ~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~-----~~~~~~~~~~v~~~ 284 (338)
T cd06502 211 DFIARARRRRK-QAGGGMRQSGFLAAAGLAALENDLWLRRLRHDHEMARRLAEALEELGGL-----ESEVQTNIVLLDPV 284 (338)
T ss_pred HHHHHHHHHHH-HhCCChhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcCCC-----cccccCCeEEEecC
Confidence 88887763111 1224556677777887777753111345577777788888888765321 11234555555442
Q ss_pred cCCCcCchhhcccchHHHHHHHHHHH---HCCeEeccCCCcceEE--eCCCcHHHHHHHHHHHHH
Q 011856 410 EGPVYNFEDAKKSETTKFARFYRGML---EEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAEK 469 (476)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~l~---~~Gv~~~~~~~~~~~~--~~~~t~e~i~~~~~~l~~ 469 (476)
. ......++.+.+. ++|+++.+.+...+|+ ++.+|++|++++++++++
T Consensus 285 ~------------~~~~~~~l~~~l~~~~~~gi~~~~~~~~~lRi~~~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 285 E------------ANAVFVELSKEAIERRGEGVLFYAWGEGGVRFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred C------------ccHHHHHHHHHHHHhhhCCEEEEecCCCeEEEEeecCCCHHHHHHHHHHHhc
Confidence 1 1122234444443 7899998775566776 566799999999999875
No 206
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.90 E-value=8.7e-22 Score=194.42 Aligned_cols=295 Identities=18% Similarity=0.170 Sum_probs=190.8
Q ss_pred CCHHHHHHHHHHHhhCC---CCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCC
Q 011856 137 PCLLENVLAEMVISAVP---SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPD 213 (476)
Q Consensus 137 ~~~~~~~la~~l~~~~~---~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~ 213 (476)
..+++.++++.+...++ +.+.+++++||++++..+++.. ...+++|++..++|++.. ..+...+..+...+...
T Consensus 38 ~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~--~~~g~~vl~~~~~~~~~~-~~~~~~~~~~~~i~~~~ 114 (350)
T cd00609 38 LPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRAL--LNPGDEVLVPDPTYPGYE-AAARLAGAEVVPVPLDE 114 (350)
T ss_pred cHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHh--CCCCCEEEEcCCCchhHH-HHHHHCCCEEEEEeccc
Confidence 34667777777776642 3678999999999999999853 234567777777766643 34333333222111110
Q ss_pred CCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-
Q 011856 214 SPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF- 292 (476)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~- 292 (476)
.... ..+.+.++... .+++++|++++.++++|.+.+ .+.+++|.++|+++|+++|+||+|+++
T Consensus 115 ~~~~------------~~~~~~~~~~~---~~~~~~v~i~~~~~~tG~~~~-~~~l~~l~~~~~~~~~~~ivD~a~~~~~ 178 (350)
T cd00609 115 EGGF------------LLDLELLEAAK---TPKTKLLYLNNPNNPTGAVLS-EEELEELAELAKKHGILIISDEAYAELV 178 (350)
T ss_pred ccCC------------ccCHHHHHhhc---CccceEEEEECCCCCCCcccC-HHHHHHHHHHHHhCCeEEEEecchhhce
Confidence 0000 00114444433 247889999998888898776 444999999999999999999999877
Q ss_pred cccccc----hhhccCCCCchhhhhhhcC-CCCcEEEEEecH-HHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhc-
Q 011856 293 RLAYGG----AQEYFGVTPDLTTLGKIIG-GGLPVGAYGGRR-DIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLK- 365 (476)
Q Consensus 293 r~g~~~----~~~~~g~~pDi~t~sK~lg-~G~~iG~~~~~~-~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~- 365 (476)
..+... .....+....+.+++|.++ +|+++|++++++ ++++.+.. .....+++.+...+.++..+|+...
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~ 255 (350)
T cd00609 179 YDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEELLERLKK---LLPYTTSGPSTLSQAAAAAALDDGEE 255 (350)
T ss_pred eCCcccccccCcCccCcEEEEeecccccCCcccceEEEecCHHHHHHHHHH---HHHhcccCCChHHHHHHHHHHhCcHH
Confidence 433321 1111222222337999999 889999999998 78888763 2233356778888888888887652
Q ss_pred C-CCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccC
Q 011856 366 E-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPS 444 (476)
Q Consensus 366 ~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~ 444 (476)
. +...+++.++.+++.+.|++...... .....|.++++.+... .....+.+.|.++||.+.+.
T Consensus 256 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~---~~~~~g~~~~~~~~~~-------------~~~~~~~~~l~~~gi~i~~~ 319 (350)
T cd00609 256 HLEELRERYRRRRDALLEALKELGPLVV---VKPSGGFFLWLDLPEG-------------DDEEFLERLLLEAGVVVRPG 319 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCccc---cCCCccEEEEEecCCC-------------ChHHHHHHHHHhCCEEEecc
Confidence 1 45556666677777777765422110 3445677777766321 11235566777889999876
Q ss_pred ------CCcceEEeCCCcHHHHHHHHHHHHH
Q 011856 445 ------QFEAGFTSLAHSSDDIQHTITAAEK 469 (476)
Q Consensus 445 ------~~~~~~~~~~~t~e~i~~~~~~l~~ 469 (476)
....+|+++...++|+++++++|++
T Consensus 320 ~~~~~~~~~~iRi~~~~~~~~i~~~~~al~~ 350 (350)
T cd00609 320 SAFGEGGEGFVRLSFATPEEELEEALERLAE 350 (350)
T ss_pred cccccCCCCeEEEEeeCCHHHHHHHHHHhhC
Confidence 3346788655559999999998863
No 207
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.90 E-value=7.7e-22 Score=195.52 Aligned_cols=286 Identities=12% Similarity=0.104 Sum_probs=183.1
Q ss_pred HHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHHHhccCC-ceEEEEeCCCCCCchhHHhhcCCCCccCCCC-CCCCC
Q 011856 141 ENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGR-ERIIKFEGCYHGHADPFLVKAGSGVATLGLP-DSPGV 217 (476)
Q Consensus 141 ~~~la~~l~~~~~-~~e~v~~~~sGseA~~~al~~ar~~~~~-~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~-~~~~~ 217 (476)
..+|.+.+++++. ..++|++++|+++++..+++.. ...+ +.|++.++.| +.+.......|..+...+.. ...++
T Consensus 61 ~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~~~--~~~g~~~vlv~~p~y-~~~~~~~~~~g~~~~~v~~~~~~~~~ 137 (364)
T PRK04781 61 PPGLRSALAALYGCAPEQLLIGRGSDEAIDLLVRAL--CVPGRDAVLVTPPVF-GMYAVCARLQNAPLVEVPLVDGADGF 137 (364)
T ss_pred HHHHHHHHHHHhCcChHHEEEeCCHHHHHHHHHHHh--cCCCCCeEEEcCCCh-HHHHHHHHHcCCEEEEEecCCCccCC
Confidence 4677777777775 6789999999999999999832 2233 5566666654 43333334445443332221 01111
Q ss_pred CCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccc
Q 011856 218 PKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAY 296 (476)
Q Consensus 218 ~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~ 296 (476)
. -|++++++.+.. +++++|++...+|++|.+.+.++ +++|.++|+ +++++|+||+|..| ....
T Consensus 138 ~------------~d~~~l~~~~~~--~~~~lv~l~~p~NPTG~~~~~~~-~~~l~~~~~-~~~~iI~Deay~~f~~~~~ 201 (364)
T PRK04781 138 H------------ADVPAIVAAALA--SNAKLVFLCSPSNPAGSAIALDQ-IERALQALQ-GKALVVVDEAYGEFSDVPS 201 (364)
T ss_pred C------------cCHHHHHHHHhc--cCCeEEEEcCCCCCCCCCcCHHH-HHHHHHhCC-CCcEEEEeCcchhhcCCcc
Confidence 0 167777655433 25666666666677888887444 666666664 48999999999888 3211
Q ss_pred cchhhccCCCCchh---hhhhhcC-CCCcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhc--C-CCH
Q 011856 297 GGAQEYFGVTPDLT---TLGKIIG-GGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLK--E-PGT 369 (476)
Q Consensus 297 ~~~~~~~g~~pDi~---t~sK~lg-~G~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~--~-~~~ 369 (476)
. ....+..++++ ||||++| +|+|+||+++++++++.+.+. ...++.+.+++.++.++|+.-. . .+.
T Consensus 202 ~--~~~~~~~~~vi~~~SfSK~~gl~GlRvGy~v~~~~l~~~l~~~-----~~~~~~~~~~~~~a~~~l~~~~~~~~~~~ 274 (364)
T PRK04781 202 A--VGLLARYDNLAVLRTLSKAHALAAARIGSLIANAELIAVLRRC-----QAPYPVPTPCAALAEQALSAPALAVTARR 274 (364)
T ss_pred h--HHHHhhCCCEEEEecChhhcccccceeeeeeCCHHHHHHHHhc-----cCCCCCCHHHHHHHHHHHhcccHHHHHHH
Confidence 1 11122234443 7999999 899999999999999988742 2346678888888877775211 0 122
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCC----
Q 011856 370 YEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ---- 445 (476)
Q Consensus 370 ~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~---- 445 (476)
.++++++.+.+.+.|+++. ++....+..|+++++.+.+ ..++.+.|.++||.+.++.
T Consensus 275 ~~~~~~~r~~l~~~L~~~~---~~~~~~p~~g~f~~~~~~~----------------~~~~~~~l~~~gI~v~~~~~~~~ 335 (364)
T PRK04781 275 VAEVRAERERLHAALAQLP---GVRRVYPSQGNFLLVRFDD----------------AEAAFQALLAAGVVVRDQRAAPR 335 (364)
T ss_pred HHHHHHHHHHHHHHHHhCC---CCCeECCCCCcEEEEEcCC----------------HHHHHHHHHHCCeEEeeCCCCCC
Confidence 3334445555555554421 2222345678888887631 1467888999999998864
Q ss_pred -CcceEEeCCCcHHHHHHHHHHHHHHHH
Q 011856 446 -FEAGFTSLAHSSDDIQHTITAAEKVKM 472 (476)
Q Consensus 446 -~~~~~~~~~~t~e~i~~~~~~l~~~~~ 472 (476)
.+++|+++. +++++++++++|+++..
T Consensus 336 ~~~~~Ris~~-~~~~~~~l~~al~~~~~ 362 (364)
T PRK04781 336 LSDALRITLG-TPEQNDRVLAALQRTQA 362 (364)
T ss_pred CCCeEEEeCC-CHHHHHHHHHHHHHHHh
Confidence 235777766 68899999999988654
No 208
>PRK10534 L-threonine aldolase; Provisional
Probab=99.89 E-value=1.4e-21 Score=191.79 Aligned_cols=320 Identities=17% Similarity=0.123 Sum_probs=195.8
Q ss_pred EEecccChhhccCCCCcHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccC
Q 011856 101 YIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTG 180 (476)
Q Consensus 101 ~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~~~~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~ 180 (476)
+|||.++ .+-| .+|.+.+++.+...... .+++.....+|.+.+++++ +.+.+++++||++++..++... ...
T Consensus 1 ~~~~~~~---~~~~-p~~~~~~a~~~~~~~~~-~Y~~~~~~~~L~~~la~~~-g~~~~~v~~~g~~a~~~~l~~~--~~~ 72 (333)
T PRK10534 1 MIDLRSD---TVTR-PSRAMLEAMMAAPVGDD-VYGDDPTVNALQDYAAELS-GKEAALFLPTGTQANLVALLSH--CER 72 (333)
T ss_pred Ccccccc---cCCC-CCHHHHHHHHhccCCCc-ccCCCHHHHHHHHHHHHHh-CCCeEEEeCchHHHHHHHHHHh--cCC
Confidence 4789988 5555 88999999887554332 2237888889999999988 5667789999999998888742 334
Q ss_pred CceEEEEeCCCCCCchh--HHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCC---CCeEEEEEccc
Q 011856 181 RERIIKFEGCYHGHADP--FLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK---GEIAAIILEPV 255 (476)
Q Consensus 181 ~~~ii~~~~~yhg~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~---~~~a~vi~ep~ 255 (476)
+++|++..++|...+.. .....+..+.. ++.... -..|+++|++.++.+. .++++|+++.+
T Consensus 73 gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~------------~~~d~~~l~~~i~~~~~~~~~~~lv~l~np 138 (333)
T PRK10534 73 GEEYIVGQAAHNYLYEAGGAAVLGSIQPQP--IDAAAD------------GTLPLDKVAAKIKPDDIHFARTRLLSLENT 138 (333)
T ss_pred CCeeEEechhhhhHhcCCchHHhcCceEEe--ecCCCC------------CCCCHHHHHHhhcccCcCcccceEEEEecC
Confidence 56666554444221111 11111111111 110000 0127899988885310 13566666632
Q ss_pred CCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccc-cchhhccCCCCc--hhhhhhhcCCCCcEE-EEEecHH
Q 011856 256 VGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAY-GGAQEYFGVTPD--LTTLGKIIGGGLPVG-AYGGRRD 330 (476)
Q Consensus 256 ~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~-~~~~~~~g~~pD--i~t~sK~lg~G~~iG-~~~~~~~ 330 (476)
+ +|.+.+.++ +++|.++|++||++||+||+|. | .... ..........+| +++|||+++. ++| |++++++
T Consensus 139 ~--~G~v~~~~~-l~~i~~~~~~~~~~lvvDEA~~-~~~~~~~~~~~~~~~~~~~~~~~s~SK~~~~--~~G~~~~~~~~ 212 (333)
T PRK10534 139 H--NGKVLPREY-LKQAWEFTRERNLALHVDGARI-FNAVVAYGCELKEITQYCDSFTICLSKGLGT--PVGSLLVGNRD 212 (333)
T ss_pred C--CCeecCHHH-HHHHHHHHHHcCCeEEeeHHHH-HHHHHHcCCCHHHHHhcCCEEEEEeEcCCCC--cccceEEcCHH
Confidence 2 488777555 8999999999999999999986 3 2110 001111111123 3479998763 578 5778999
Q ss_pred HHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEec
Q 011856 331 IMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTE 410 (476)
Q Consensus 331 i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~ 410 (476)
+++.++..... ....++.+.++++++.++|+.. .+.+++..+.++++.+.|+++ ++. ..++.+.|+++.+..
T Consensus 213 ~i~~~~~~~~~-~~~~~~~~~~~~a~~~~~l~~~--~~~~~~~~~~r~~l~~~L~~~----g~~-~~~~~~nfv~~~~~~ 284 (333)
T PRK10534 213 YIKRARRWRKM-TGGGMRQAGILAAAGLYALKHN--VARLQEDHDNAAWLAEQLREA----GAD-VMRQDTNMLFVRVGE 284 (333)
T ss_pred HHHHHHHHHHH-hCCchhhHHHHHHHHHHHHHhh--HHHHHHHHHHHHHHHHHHHhC----CCc-cCCCCceEEEEECCc
Confidence 98888631111 1112233456677777777532 233444445566777777764 221 123457777766531
Q ss_pred CCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCCcceEE--eCCCcHHHHHHHHHHHHHHHH
Q 011856 411 GPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAEKVKM 472 (476)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~--~~~~t~e~i~~~~~~l~~~~~ 472 (476)
....++.+.|+++||++.++. .+++ ++.+|++++++++++|++++.
T Consensus 285 --------------~~~~~~~~~l~~~gi~v~~~~--~~rl~~~~r~t~e~~~~~~~~l~~~~~ 332 (333)
T PRK10534 285 --------------EQAAALGEYMRERNVLINASP--IVRLVTHLDVSREQLAEVVAHWRAFLA 332 (333)
T ss_pred --------------hhHHHHHHHHHHcCeeecCCc--eEEEEEEeCCCHHHHHHHHHHHHHHhc
Confidence 113567788999999998864 3555 445899999999999997764
No 209
>PLN02231 alanine transaminase
Probab=99.89 E-value=3.6e-21 Score=197.90 Aligned_cols=332 Identities=14% Similarity=0.153 Sum_probs=199.6
Q ss_pred cHHHHHHHHHHHHh--cC-C--CC---CCCHHHHHHHHHHHhhCC---CCCeEEEeCCHHHHHHHHHHHHHhccCCceEE
Q 011856 117 DDQVLAALGETMKK--GT-S--FG---APCLLENVLAEMVISAVP---SIEMVRFVNSGTEACMGVLRLARAFTGRERII 185 (476)
Q Consensus 117 ~p~v~~a~~~~l~~--~~-~--~~---~~~~~~~~la~~l~~~~~---~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii 185 (476)
+.++++++.+.+.. +. . |+ +..++++.+++++.+..+ .+++|++|+|+++|+..++++.. -..++.|+
T Consensus 142 p~~~i~~a~~~l~~~~~~~~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~~ai~~~~~~l~-~~~gd~Vl 220 (534)
T PLN02231 142 SADAIERAWQILDQIPGRATGAYSHSQGIKGLRDAIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLI-RSEKDGIL 220 (534)
T ss_pred CHHHHHHHHHHHHhcCCccccCcCCCCCcHHHHHHHHHHHHhccCCCCCcccEEEeCCHHHHHHHHHHHhc-cCCCCEEE
Confidence 45666666676665 21 1 22 234677777777776543 57899999999999999999421 12468899
Q ss_pred EEeCCCCCCchhHHhhcCCCCccCCCCCC--CCCCCCCCCceeeccCCCHHHHHHHHhcCC---CCeEEEEEcccCCCCC
Q 011856 186 KFEGCYHGHADPFLVKAGSGVATLGLPDS--PGVPKGATYETLTAPFNDVSALENLFENNK---GEIAAIILEPVVGNSG 260 (476)
Q Consensus 186 ~~~~~yhg~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~d~~~le~~l~~~~---~~~a~vi~ep~~~~~G 260 (476)
+..++|.++. ..+...|..+..+++... +++ |+++|++.+++.. .+++++++...+|++|
T Consensus 221 i~~P~Y~~y~-~~~~~~g~~~v~~~l~~~~~~~~--------------d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG 285 (534)
T PLN02231 221 CPIPQYPLYS-ASIALHGGTLVPYYLDEATGWGL--------------EISELKKQLEDARSKGITVRALVVINPGNPTG 285 (534)
T ss_pred EeCCCChhHH-HHHHHcCCEEEEEecCcccCCCC--------------CHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCC
Confidence 9999998754 334444443333222111 111 7899999886421 1455544444456678
Q ss_pred cccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cc-cccc-hhhc----cCC---CCchh---hhhhhc-C-CCCcEEEE
Q 011856 261 FIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RL-AYGG-AQEY----FGV---TPDLT---TLGKII-G-GGLPVGAY 325 (476)
Q Consensus 261 ~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~-g~~~-~~~~----~g~---~pDi~---t~sK~l-g-~G~~iG~~ 325 (476)
.+.+.++ +++|.++|++||++||+||+|..+ .. +..+ .... .|. ...++ +|||.+ + .|+|+||+
T Consensus 286 ~vls~e~-l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy~ 364 (534)
T PLN02231 286 QVLAEEN-QRDIVEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGGYM 364 (534)
T ss_pred cCCCHHH-HHHHHHHHHHcCCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccceEEE
Confidence 7776555 999999999999999999999887 43 2221 1111 111 11233 789987 5 79999999
Q ss_pred Ee---cHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHh-------c----C-CCHHHHHHHHHHHHHHHHHHHhhh
Q 011856 326 GG---RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRL-------K----E-PGTYEYLNKITGELTQGIIDAGKK 390 (476)
Q Consensus 326 ~~---~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~-------~----~-~~~~~~~~~~~~~l~~~L~~~~~~ 390 (476)
++ ++++++.+.+. .. .+.+.+.+++.++..+++-- + + +++++.++++.+.+.+.|+++
T Consensus 365 ~~~~~~~~l~~~l~k~---~~-~~~~s~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~--- 437 (534)
T PLN02231 365 EVTGFTSDVREQIYKV---AS-VNLCSNISGQILASLVMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALNSL--- 437 (534)
T ss_pred EEecCCHHHHHHHHHH---Hh-hhcCCChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---
Confidence 75 68888887632 11 23455667777776666311 0 0 123445566666666666543
Q ss_pred cCCceEeeeeceeEEE-EEecCCCcCchhhcccchHHHHHHHHHHH-HCCeEeccCCC-------cceEEeCCCcHHHHH
Q 011856 391 AGHAICGGYISGMFGF-FFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQF-------EAGFTSLAHSSDDIQ 461 (476)
Q Consensus 391 ~~~~~~v~~~g~~~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~~-------~~~~~~~~~t~e~i~ 461 (476)
+.+...+..|.|+.| .+.-+. ................++..|+ +.||.+.|+.. .++|+++..++++++
T Consensus 438 -~gi~~~~p~Ggfylw~~l~lp~-~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~~g~~~~Rit~~~~~e~l~ 515 (534)
T PLN02231 438 -EGVTCNKAEGAMYLFPRIHLPQ-KAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQVPGTWHFRCTILPQEDKIP 515 (534)
T ss_pred -CCceecCCCeeeEEeccccCcH-HHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCCCCCCCeEEEEeCCCHHHHH
Confidence 222333444555444 332110 0000000000000123455555 67999998741 237888888999999
Q ss_pred HHHHHHHHHHHHh
Q 011856 462 HTITAAEKVKMRF 474 (476)
Q Consensus 462 ~~~~~l~~~~~~~ 474 (476)
+++++|.+++++.
T Consensus 516 eal~RL~~~~~~~ 528 (534)
T PLN02231 516 AIVSRLTEFHKSF 528 (534)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999988764
No 210
>PLN02397 aspartate transaminase
Probab=99.89 E-value=6.2e-21 Score=192.48 Aligned_cols=297 Identities=16% Similarity=0.102 Sum_probs=172.8
Q ss_pred CHHHHHHHHHHHhhCCC---CCeEEE--eCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCC-
Q 011856 138 CLLENVLAEMVISAVPS---IEMVRF--VNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGL- 211 (476)
Q Consensus 138 ~~~~~~la~~l~~~~~~---~e~v~~--~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~- 211 (476)
.++++++++++.+.... .++|.. +.+|+.+....+.+...+.+++.|++.+++|.++. ..+...|..+..++.
T Consensus 94 ~~LR~aia~~~~~~~~~~~~~~~i~~~~i~~g~Ga~~l~~~~~~~~~pGd~Vlv~~P~y~~y~-~~~~~~g~~~~~v~l~ 172 (423)
T PLN02397 94 AEFNKLSAKLAYGADSPAIKENRVATVQCLSGTGSLRLGAEFLARFYPGSTIYIPNPTWGNHH-NIFRDAGVPVRTYRYY 172 (423)
T ss_pred HHHHHHHHHHHcCCCCchhhcCeeEeeecccchHHHHHHHHHHHHhCCCCEEEEeCCCchhHH-HHHHHcCCeEEEeecc
Confidence 35666666666443211 133321 33444443333333223446678999999887754 334444443333221
Q ss_pred C-CCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc
Q 011856 212 P-DSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT 290 (476)
Q Consensus 212 ~-~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~ 290 (476)
+ ...+ .|++.+++.+++..+++.++++...+|++|.+.+.++ +++|.++|++||+++|+||+|.
T Consensus 173 ~~~~~~--------------~d~~~l~~~l~~~~~~~~~i~~~~P~NPTG~v~s~e~-l~~i~~~a~~~~~~vI~De~Y~ 237 (423)
T PLN02397 173 DPKTRG--------------LDFDGLLEDLKAAPDGSFVLLHACAHNPTGVDPTPEQ-WEQISDLIKSKNHLPFFDSAYQ 237 (423)
T ss_pred cCcCCc--------------cCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHH-HHHHHHHHHhCCcEEEEecccC
Confidence 1 0111 1788888888654335566666666777888776554 9999999999999999999999
Q ss_pred Cc-cccc---cchhhcc-CCCCchh---hhhhhcC-CCCcEEEEE--e-cHHHHHhhcCC-CCccccCCCCCcHHHHHHH
Q 011856 291 GF-RLAY---GGAQEYF-GVTPDLT---TLGKIIG-GGLPVGAYG--G-RRDIMEMVAPA-GPMYQAGTLSGNPLAMTAG 357 (476)
Q Consensus 291 g~-r~g~---~~~~~~~-g~~pDi~---t~sK~lg-~G~~iG~~~--~-~~~i~~~l~~~-~~~~~~~t~~~~~~~~aaa 357 (476)
+| ..+. ......+ ....+++ +|||.++ .|||+||++ + ++++++.+... .........+.+.+++.++
T Consensus 238 ~l~~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~G~RvG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~ 317 (423)
T PLN02397 238 GFASGDLDADAQSVRMFVEDGHEILVAQSYAKNMGLYGERVGALSVVCKSADVAVRVKSQLKLIARPMYSNPPIHGASIV 317 (423)
T ss_pred CccCCchhhhhHHHHHHHhcCCcEEEEEECcccCCCccccceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHHH
Confidence 88 4321 1111111 1112233 7999999 899999984 3 56554432210 0111122334566777777
Q ss_pred HHHHHHhc--------CCCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHH
Q 011856 358 IHTLKRLK--------EPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFAR 429 (476)
Q Consensus 358 ~aal~~~~--------~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 429 (476)
.++|+.-. -++.+++++++.+.+.+.|+++....++....+..|.++|+.+. .+
T Consensus 318 ~~~L~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~~~~~~~~~~p~gg~fl~~~l~------------------~~ 379 (423)
T PLN02397 318 ATILGDPELFSEWTKELKGMADRIISMRQKLYDALEARGSPGDWSHITKQIGMFSFTGLN------------------KE 379 (423)
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcccCCceEEEecCCC------------------HH
Confidence 66664210 02344566667777777777652111122122445555555441 24
Q ss_pred HHHHHH-HCCeEeccCCCcceEEeCC-CcHHHHHHHHHHHHHHHH
Q 011856 430 FYRGML-EEGVYFAPSQFEAGFTSLA-HSSDDIQHTITAAEKVKM 472 (476)
Q Consensus 430 ~~~~l~-~~Gv~~~~~~~~~~~~~~~-~t~e~i~~~~~~l~~~~~ 472 (476)
+++.|+ ++||++.+.+ |++++ .+++.+++++++|+++++
T Consensus 380 ~~~~Ll~~~~V~v~~~~----Ri~~~~~~~~~i~~~~~~i~~~~~ 420 (423)
T PLN02397 380 QVDRMTKEYHIYMTRDG----RISMAGLSSKNVPYLADAIHAVVT 420 (423)
T ss_pred HHHHHHHhCCEEECCCC----eEEEeeCCHHHHHHHHHHHHHHHh
Confidence 666775 5699997543 88775 899999999999999975
No 211
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.89 E-value=2.5e-21 Score=179.91 Aligned_cols=379 Identities=18% Similarity=0.217 Sum_probs=260.8
Q ss_pred HHHHHHHHhhhCCCCCCCccccccccCCCCeEEEeecCCEEEEcCCCEEEecccChhhccCCC-CcHHHHHHHHHHHHh-
Q 011856 53 SEEAFNVAKELMPGGVNSPVRAFKSVGGQPIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGH-ADDQVLAALGETMKK- 130 (476)
Q Consensus 53 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~-~~p~v~~a~~~~l~~- 130 (476)
.++..+..++|.|...-.+.-.--+ -..+.+++..-+..++ +||+.+++|.+. |+||. .++++.+.+...+.+
T Consensus 50 ~~eideLiedw~PEPLV~~~~~~~~-~~~~~v~e~~~~~~~~-i~G~~~~N~aS~---NfL~l~~~~~ike~a~~~lrky 124 (467)
T KOG1358|consen 50 EQEIDELIEDWEPEPLVPPVPEDHP-VLNTPVLESVMLPHVT-IDGKDVLNFASA---NFLGLIENEEIKEEASFTLRKY 124 (467)
T ss_pred HHHHHHHHhcCCCCCCCCCCccccc-ccCCcccccccCCceE-ecCceeecccch---hhhhhcccHHHHHHHHHHHHHh
Confidence 4677788888998876544320000 1124567778888877 999999999998 99998 699999999999988
Q ss_pred c--C----CCCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCC
Q 011856 131 G--T----SFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGS 204 (476)
Q Consensus 131 ~--~----~~~~~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~ 204 (476)
| . .|++..+.+.+|.+.+++++ +.+..++.+-|..++..++. ++.++++||..+...+-.....+.
T Consensus 125 GvGsCGPrGFYGt~DvHldlE~~iakF~-G~E~aivYs~gF~ti~S~ip---afsKrGDIi~~de~~nfaIq~Glq---- 196 (467)
T KOG1358|consen 125 GVGSCGPRGFYGTIDVHLDLEKRIAKFM-GTEDAIVYSYGFSTIESAIP---AFSKRGDIIFVDEAVNFAIQKGLQ---- 196 (467)
T ss_pred CCCCcCCCcccccceeecccHHHHHHhh-CCcceeeeccccchhhhcch---hhhccCcEEEEehhhhHHHHHHHh----
Confidence 2 2 23345566667777777777 66666666668999999999 899999999987654432222222
Q ss_pred CCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCC-------C---CeEEEEEcccCCCCCcccCCHHHHHHHHH
Q 011856 205 GVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK-------G---EIAAIILEPVVGNSGFIAPKPDFLNAIRR 274 (476)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~-------~---~~a~vi~ep~~~~~G~i~~~~~~l~~l~~ 274 (476)
..+..+..+.|||+++||+++.+.. . ....+++|..+.|.|.+.| +.+|.+
T Consensus 197 ---------------lSRS~i~~Fkhndm~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~i~p----l~~iv~ 257 (467)
T KOG1358|consen 197 ---------------LSRSTISYFKHNDMEDLERLLPEQEDEDQKNPKKALTRRFIVVEGLYANTGDICP----LPEIVK 257 (467)
T ss_pred ---------------hhhheeEEecCCCHHHHHHhccCcchhhhhccccccceEEEEEEeeccCCCcccc----cHHHHH
Confidence 2233578889999999998886432 1 1467889999999999999 999999
Q ss_pred HHHHhCCEEEEeccc-cCc-cccccchhhccCCCC---chhh--hhhhcCCCCcEEEEEecHHHHHhhcCCCCccccCCC
Q 011856 275 ITKENGALLIFDEVM-TGF-RLAYGGAQEYFGVTP---DLTT--LGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTL 347 (476)
Q Consensus 275 l~~~~g~llI~DEv~-~g~-r~g~~~~~~~~g~~p---Di~t--~sK~lg~G~~iG~~~~~~~i~~~l~~~~~~~~~~t~ 347 (476)
+..||...+|.||.+ .|. ...+.+..+|+++.+ |+++ +.-++++ -.|+.+|+.-+++.-+-.+..+.++ -
T Consensus 258 lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~alas--~GgFc~G~~~i~~hQrLSg~~Y~fS-A 334 (467)
T KOG1358|consen 258 LKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETALAS--GGGFCAGKSFIADHQRLSGSGYCFS-A 334 (467)
T ss_pred HHhhheEEEEEecccccccccccCccccccCCCCccceeeeeecccccccc--cCceeecceeeEeeeeccccceeee-c
Confidence 999999999999999 455 333466789999864 5665 4445553 1455566555544433233444443 3
Q ss_pred CCcHHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHH
Q 011856 348 SGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTK 426 (476)
Q Consensus 348 ~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ 426 (476)
+.+|....||..+++.++. ++..+.++.....+.+.|+.. .++...-.....++.+.+.....+. ..+...
T Consensus 335 slPp~la~aa~~ai~i~~~~p~~~~~L~~k~~~~H~~l~~~---s~~~v~~~~~SPi~hl~l~~~~~s~-----e~e~~l 406 (467)
T KOG1358|consen 335 SLPPYLAGAAIKAILIEEWNPEIVQPLRAKVAKFHAALSSN---SGFIVSGSPESPIIHLQLERSYGSR-----EKEEKL 406 (467)
T ss_pred cCchhhhhhHHHHHHHHhhCcchhhhhhccccccchhhhcC---CceEEecCcCCceeeeeecccccch-----HHHHHH
Confidence 6678888999999998876 777888888888888877762 1122211223445555554321110 112344
Q ss_pred HHHHHHHHHHCCeEeccCC----------CcceEE--eCCCcHHHHHHHHHHHHHHHHHh
Q 011856 427 FARFYRGMLEEGVYFAPSQ----------FEAGFT--SLAHSSDDIQHTITAAEKVKMRF 474 (476)
Q Consensus 427 ~~~~~~~l~~~Gv~~~~~~----------~~~~~~--~~~~t~e~i~~~~~~l~~~~~~~ 474 (476)
.++++..++.+|+++.... .+.+++ +..+++||++++.+.++++..++
T Consensus 407 L~eivd~~i~~~~ll~~a~~~~~~e~~~~~pSiri~~~a~~seeel~ra~~~ik~~~~~~ 466 (467)
T KOG1358|consen 407 LEEIVDKCIAEGVLLTRAKYLEKLERCPIPPSIRICVSAGMSEEELERAAELIKEVASAV 466 (467)
T ss_pred HHHHHHHHHhhcceehhhhhhhhcccCCCCCcEEEEEeCCCCHHHHHHHHHHHHHHHHhh
Confidence 5678888887788876542 123444 68899999999999999987664
No 212
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.88 E-value=2e-20 Score=186.47 Aligned_cols=313 Identities=19% Similarity=0.138 Sum_probs=197.2
Q ss_pred CCCcHHHHHHHHHHHHhc--CCCCCC--CHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHHHhcc--CCceEEE
Q 011856 114 GHADDQVLAALGETMKKG--TSFGAP--CLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFT--GRERIIK 186 (476)
Q Consensus 114 G~~~p~v~~a~~~~l~~~--~~~~~~--~~~~~~la~~l~~~~~-~~e~v~~~~sGseA~~~al~~ar~~~--~~~~ii~ 186 (476)
.+.+|.+++++.+++... ....++ .+...+++++++++++ ..+.+++++||+++++.+++.++... ++++|++
T Consensus 30 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~ggt~a~~~a~~~~~~~~~~~~~~vl~ 109 (371)
T PRK13520 30 TEPHPIARKAHEMFLETNLGDPGLFPGTAKLEEEAVEMLGELLHLPDAYGYITSGGTEANIQAVRAARNLAKAEKPNIVV 109 (371)
T ss_pred cCchHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCCCeEEecCcHHHHHHHHHHHHhhccCCCceEEe
Confidence 347899999999988752 111122 2444788899999886 34578999999999999998765542 3567777
Q ss_pred EeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCH
Q 011856 187 FEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKP 266 (476)
Q Consensus 187 ~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~ 266 (476)
.+..+.. ....+...|..+...+... .+ ..|+++|++.+++ ++++|++...++++|.+.|
T Consensus 110 ~~~~h~s-~~~~~~~~g~~~~~v~~~~-~~-------------~~d~~~l~~~i~~---~~~~vi~~~~~~~tG~~~~-- 169 (371)
T PRK13520 110 PESAHFS-FDKAADMLGVELRRAPLDD-DY-------------RVDVKAVEDLIDD---NTIGIVGIAGTTELGQVDP-- 169 (371)
T ss_pred cCcchHH-HHHHHHHcCceEEEecCCC-CC-------------cCCHHHHHHHHhh---CCEEEEEEcCCcCCcccCC--
Confidence 7665443 2222222333222211110 00 1279999999974 3444554444566899988
Q ss_pred HHHHHHHHHHHHhCCEEEEeccccCc-c-cccc---chhhccCCCCchhh--hhhhcCCCCcEEEEEe-cHHHHHhhcCC
Q 011856 267 DFLNAIRRITKENGALLIFDEVMTGF-R-LAYG---GAQEYFGVTPDLTT--LGKIIGGGLPVGAYGG-RRDIMEMVAPA 338 (476)
Q Consensus 267 ~~l~~l~~l~~~~g~llI~DEv~~g~-r-~g~~---~~~~~~g~~pDi~t--~sK~lg~G~~iG~~~~-~~~i~~~l~~~ 338 (476)
+++|.++|++||+++++||+|+++ - .... +..... ..|.++ ..|...+|+|+|+++. ++++++.+...
T Consensus 170 --l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~--~vd~~~~s~~K~~~a~~~~G~~~~~~~~~~~~l~~~ 245 (371)
T PRK13520 170 --IPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSLP--GVDSITIDPHKMGLAPIPAGGILFRDESYLDALAVD 245 (371)
T ss_pred --HHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCccccCC--CCceEEECCccccCccCCceEEEEcCHHHHHhhccc
Confidence 999999999999999999999765 1 1111 111111 234443 3464446789998865 66677766421
Q ss_pred CCcc-------ccCCCCCcHHHHHHHHHHHHHhcCC---CHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEE
Q 011856 339 GPMY-------QAGTLSGNPLAMTAGIHTLKRLKEP---GTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFF 408 (476)
Q Consensus 339 ~~~~-------~~~t~~~~~~~~aaa~aal~~~~~~---~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~ 408 (476)
.+.. ..+|. ++..++++.++|+.+.++ +..++..++.+++++.|+++ ++.........++.+.+
T Consensus 246 ~~~~~~~~~~~~~gt~--~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~----g~~~~~~~~~~~v~~~~ 319 (371)
T PRK13520 246 TPYLTSKKQATLTGTR--SGAGVAATYAVMKYLGREGYRKVVERCMENTRWLAEELKER----GFEPVIEPVLNIVAFDD 319 (371)
T ss_pred CccccCCCCcceEeec--cChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHHHHHHHHhC----CCEEecCCCceEEEEec
Confidence 1111 11222 334577777888876543 46677778888888887764 22111223344555544
Q ss_pred ecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCC-cceEEe--CCCcHHHHHHHHHHHHHHHH
Q 011856 409 TEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-EAGFTS--LAHSSDDIQHTITAAEKVKM 472 (476)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~-~~~~~~--~~~t~e~i~~~~~~l~~~~~ 472 (476)
. + ..++.+.|.++||.+..... ..+|++ ..+|++|++++++.|+++++
T Consensus 320 ~-------------~---~~~v~~~L~~~gi~v~~~~~~~~iRis~~~~~t~edi~~~~~~l~~~~~ 370 (371)
T PRK13520 320 P-------------N---PDEVREKLRERGWRVSVTRCPEALRIVCMPHVTREHIENFLEDLKEVKK 370 (371)
T ss_pred C-------------C---HHHHHHHHHHCCceeccCCCCCEEEEEEECCCCHHHHHHHHHHHHHHhh
Confidence 2 1 25788889999999987653 346764 45799999999999998765
No 213
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.88 E-value=1.5e-20 Score=187.82 Aligned_cols=332 Identities=12% Similarity=0.072 Sum_probs=202.3
Q ss_pred ccCCCCcHHHHHHHHHHHHh-cCC-C---C---CCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCc
Q 011856 111 AIIGHADDQVLAALGETMKK-GTS-F---G---APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRE 182 (476)
Q Consensus 111 ~~lG~~~p~v~~a~~~~l~~-~~~-~---~---~~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~ 182 (476)
.-+|..++.+++|+.+.... +.. . . ...+...++.+.+++++ +.+.++|++||++++..+++.. ..+++
T Consensus 27 ~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~-g~~~~~~~~g~t~a~~~al~~l--~~~gd 103 (387)
T PRK09331 27 QRGGILTPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFL-GMDEARVTHGAREGKFAVMHSL--CKKGD 103 (387)
T ss_pred hcCCCCCHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHh-CCCcEEEeCCHHHHHHHHHHHh--cCCCC
Confidence 45677889999999987743 110 1 1 12345788888898888 5678999999999999999842 23455
Q ss_pred eEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcC----CCCeEEEEEcccCCC
Q 011856 183 RIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN----KGEIAAIILEPVVGN 258 (476)
Q Consensus 183 ~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~----~~~~a~vi~ep~~~~ 258 (476)
+|++...+ |......+...|..+...+.....+. ..|++++++.++++ .+++++|+++.++++
T Consensus 104 ~Vlv~~~~-h~s~~~~~~~~G~~~~~v~~~~~~~~------------~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~ 170 (387)
T PRK09331 104 YVVLDGLA-HYTSYVAAERAGLNVREVPKTGYPEY------------KITPEAYAEKIEEVKEETGKPPALALLTHVDGN 170 (387)
T ss_pred EEEECCCc-hHHHHHHHHHcCCEEEEEeCccCcCC------------CcCHHHHHHHHHHhhhccCCCCEEEEEECCCCC
Confidence 56665444 43333334444443332221000000 12799999998743 236788888888888
Q ss_pred CCcccCCHHHHHHHHHHHHHhCCEEEEecccc-CccccccchhhccCCCCchhhhhhhcCCCCcEEEEEecHHHHHhhcC
Q 011856 259 SGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GFRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAP 337 (476)
Q Consensus 259 ~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~r~g~~~~~~~~g~~pDi~t~sK~lg~G~~iG~~~~~~~i~~~l~~ 337 (476)
+|.+.+ +++|.++|++||+++|+|++|+ |. . ......+|+.-.+.+++|+++++.++|++++++++++.+..
T Consensus 171 tG~~~~----l~~I~~la~~~g~~livD~a~~~g~-~--~~~~~~~g~D~~~~s~~K~l~~~~~~G~l~~~~~~i~~~~~ 243 (387)
T PRK09331 171 YGNLAD----AKKVAKVAHEYGIPFLLNGAYTVGR-M--PVDGKKLGADFIVGSGHKSMAASAPSGVLATTEEYADKVFR 243 (387)
T ss_pred Cccccc----HHHHHHHHHHcCCEEEEECCcccCC-c--CCCHHHcCCCEEEeeCcccccCCCCEEEEEECHHHHhhccc
Confidence 999988 9999999999999999999995 21 0 11112234433344788999977789999999999888754
Q ss_pred CCCcc-------ccCCCCCcHHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHH-hhhcCCceEeeeeceeEEEEE
Q 011856 338 AGPMY-------QAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDA-GKKAGHAICGGYISGMFGFFF 408 (476)
Q Consensus 338 ~~~~~-------~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~v~~~g~~~~i~~ 408 (476)
..+.+ .+++ .++....+++++++.+.+ .+..++..++.+++++.|.++ +.+. ..+-.....++.++.
T Consensus 244 ~~~~~~~~~~~~~~~~--~~~~~~~~~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~l~g~~~--~~~~~~~~~i~~~~~ 319 (387)
T PRK09331 244 TSRKFGVKEVELLGCT--LRGAPLVTLMASFPHVVERVKRWDEEVKKARWFVDELEKIEGFKQ--LGEKPRNHDLMKFET 319 (387)
T ss_pred ccCCCcccceeeecee--cCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEE--eccCcCcCCeEEEeC
Confidence 32211 1112 223344455556655433 234455566777777777765 2111 100011233333332
Q ss_pred ecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCC-cceEE-eCCCcHHHHHHHHHHHHHHHHHh
Q 011856 409 TEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-EAGFT-SLAHSSDDIQHTITAAEKVKMRF 474 (476)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~-~~~~~-~~~~t~e~i~~~~~~l~~~~~~~ 474 (476)
.. . ............++.+.|.++||...+.+. ..+++ +..+|++|+++++++|++++++.
T Consensus 320 ~~--~---~~~~~~~~~~~~~~~~~L~~~gI~~~~~~~~~i~ri~~~g~t~~di~~l~~aL~~i~~~~ 382 (387)
T PRK09331 320 PS--F---DEIAKKHKRRGFFLYEELKKRGIHGIKPGATKEFKLSTYGLTWEQVEYVADAFKEIAEKY 382 (387)
T ss_pred Cc--h---hHHhhhccccchhHHHHHHHcCceEEccCCceEEEEEeccCCHHHHHHHHHHHHHHHHhc
Confidence 10 0 000000111235688899999998543333 33444 45789999999999999987753
No 214
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.88 E-value=9.5e-20 Score=183.22 Aligned_cols=328 Identities=15% Similarity=0.151 Sum_probs=205.0
Q ss_pred CCEEEecccChhhccCCCCcHHHHHHHHHHHHhc--CC-CCCC------CHHHHHHHHHHHhhCC--CCCeEEEeCCHHH
Q 011856 98 GNEYIDYVGSWGPAIIGHADDQVLAALGETMKKG--TS-FGAP------CLLENVLAEMVISAVP--SIEMVRFVNSGTE 166 (476)
Q Consensus 98 G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~--~~-~~~~------~~~~~~la~~l~~~~~--~~e~v~~~~sGse 166 (476)
+..|+|..+. |..++.+.+++.+.+... .. .+.+ .+...++.+.++++++ ..++|+|++|+++
T Consensus 16 ~~iyld~a~~------~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~t~g~t~ 89 (398)
T TIGR03392 16 GTVYLDSAAT------ALKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNAPDAENIVWTRGTTE 89 (398)
T ss_pred CeEEeeCccc------cCCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChHH
Confidence 3467775543 446789999998887542 11 1111 1334567788888876 2578999999999
Q ss_pred HHHHHHHHHH--hccCCceEEEEeCCCCCCchhH---HhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHh
Q 011856 167 ACMGVLRLAR--AFTGRERIIKFEGCYHGHADPF---LVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFE 241 (476)
Q Consensus 167 A~~~al~~ar--~~~~~~~ii~~~~~yhg~~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~ 241 (476)
++..++.... ...++++|++.++.|++..... ....|..+...+... .+ ..|++++++.++
T Consensus 90 ~l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~-~~-------------~~~~~~l~~~i~ 155 (398)
T TIGR03392 90 SINLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGA-DL-------------LPDIRQLPELLT 155 (398)
T ss_pred HHHHHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecCC-CC-------------CcCHHHHHHHhc
Confidence 9999988431 1245678888888877643222 222343332211110 00 017899999886
Q ss_pred cCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCccccccchhhccCCCCchhhhh--hhcCCC
Q 011856 242 NNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLG--KIIGGG 319 (476)
Q Consensus 242 ~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pDi~t~s--K~lg~G 319 (476)
+ ++++|++..+++++|.+.+ +++|.++|++||+++|+|++|.-... ..+.....+|+.++| |.+|.
T Consensus 156 ~---~t~lv~i~~~~n~tG~~~~----~~~i~~~~~~~~~~~ivD~a~~~~~~----~~~~~~~~~d~~~~s~~K~~gp- 223 (398)
T TIGR03392 156 P---RTRILALGQMSNVTGGCPD----LARAITLAHQYGAVVVVDGAQGVVHG----PPDVQALDIDFYAFSGHKLYGP- 223 (398)
T ss_pred c---CceEEEEECccccccccCC----HHHHHHHHHHcCCEEEEEhhhhcCCC----CCChhhcCCCEEEEecccccCC-
Confidence 4 5778888888888999988 99999999999999999999952211 111112346887777 97763
Q ss_pred CcEEEEEecHHHHHhhcCCC---Cc---------------cccCCCCCcHHHHHHHHHHHHHhcCC---CHHHHHHHHHH
Q 011856 320 LPVGAYGGRRDIMEMVAPAG---PM---------------YQAGTLSGNPLAMTAGIHTLKRLKEP---GTYEYLNKITG 378 (476)
Q Consensus 320 ~~iG~~~~~~~i~~~l~~~~---~~---------------~~~~t~~~~~~~~aaa~aal~~~~~~---~~~~~~~~~~~ 378 (476)
..+|++++++++++.+.+.. .. ..+-.-+.|..+..+..++++.+.+. +..++.+++.+
T Consensus 224 ~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~~~~~~l~~ 303 (398)
T TIGR03392 224 TGIGVLYGKTELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEAWSVSLAD 303 (398)
T ss_pred CceEEEEEcHHHHhhCCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 23899999999887765310 00 00001133555677777778776542 34455555555
Q ss_pred HHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCC------------C
Q 011856 379 ELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ------------F 446 (476)
Q Consensus 379 ~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~------------~ 446 (476)
++++.|.++. ++.........++.+.+... ...++.+.|.++||.++.+. .
T Consensus 304 ~l~~~l~~l~---g~~~~~~~~~~i~~~~~~~~--------------~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~g~~ 366 (398)
T TIGR03392 304 LAEERLAQLP---GFRSFRCPGSSLLAFDFAGV--------------HHSDLAALLAESGIALRAGQHCAQPLMAALGVS 366 (398)
T ss_pred HHHHHHhcCC---CeEEeCCCCCcEEEEEeCCc--------------CHHHHHHHHHhCCEEEecCccchHHHHHHhCCC
Confidence 5555555431 11111112234555544210 12467778889999998653 2
Q ss_pred cceEEe--CCCcHHHHHHHHHHHHHHHHHh
Q 011856 447 EAGFTS--LAHSSDDIQHTITAAEKVKMRF 474 (476)
Q Consensus 447 ~~~~~~--~~~t~e~i~~~~~~l~~~~~~~ 474 (476)
..+|++ ..+|++|+++++++|+++++.+
T Consensus 367 ~~iRvS~~~~~t~~ei~~l~~~l~~~~~~~ 396 (398)
T TIGR03392 367 GTLRASFAPYNTQQDVDALVDAVGAALELL 396 (398)
T ss_pred CEEEEEeeccCCHHHHHHHHHHHHHHHHHh
Confidence 357774 5679999999999999988764
No 215
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.88 E-value=6.2e-21 Score=188.59 Aligned_cols=309 Identities=14% Similarity=0.100 Sum_probs=190.1
Q ss_pred CEEEecccChhhccCCCCcHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHHHh
Q 011856 99 NEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARA 177 (476)
Q Consensus 99 ~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~~~~~~~~~~la~~l~~~~~-~~e~v~~~~sGseA~~~al~~ar~ 177 (476)
...+|+..|. +++|. ++.+ .+... ..|+.....+|.+.++++++ .+++|++++|+++++..+++..
T Consensus 31 ~~~~~l~~ne--~~~~~-~~~~------~~~~~--~~Yp~~~~~~Lr~aia~~~~~~~~~I~it~Gs~~~i~~~~~~~-- 97 (354)
T PRK04635 31 RGDIWINANE--SPFNN-EYKL------DLARL--NRYPECQPPELINAYSAYAGVAPEQILTSRGADEAIELLIRAF-- 97 (354)
T ss_pred CCcEEeeCCC--CCCCC-Chhh------hhHHh--ccCCCCCHHHHHHHHHHHhCcCHHHEEEeCCHHHHHHHHHHHh--
Confidence 4457777775 55553 2322 11121 22344345778888888776 6889999999999999999842
Q ss_pred ccCC-ceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccC
Q 011856 178 FTGR-ERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVV 256 (476)
Q Consensus 178 ~~~~-~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~ 256 (476)
...+ +.|++.+++|..+.. .....|..+...+...... -|++.++. + +++++|+++..+
T Consensus 98 ~~~g~d~vlv~~P~y~~y~~-~~~~~g~~v~~v~~~~~~~--------------~~~~~l~~-~----~~~~li~i~nP~ 157 (354)
T PRK04635 98 CEPGQDSIACFGPTYGMYAI-SAETFNVGVKALPLTADYQ--------------LPLDYIEQ-L----DGAKLVFICNPN 157 (354)
T ss_pred cCCCCCeEEEcCCChHHHHH-HHHHcCCEEEEEecCCCCC--------------CCHHHHHh-c----cCCCEEEEeCCC
Confidence 2233 678888888866432 2333444333322211001 15677753 2 256666666667
Q ss_pred CCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCccccccchhhccCCCCchh---hhhhhcC-CCCcEEEEEecHHHH
Q 011856 257 GNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLT---TLGKIIG-GGLPVGAYGGRRDIM 332 (476)
Q Consensus 257 ~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pDi~---t~sK~lg-~G~~iG~~~~~~~i~ 332 (476)
|++|.+.+.++ +++|.+.|+ +++||+||+|..|..... ........++++ +|||.++ +|+|+||++++++++
T Consensus 158 NPTG~~~~~~~-l~~l~~~~~--~~~vivDeay~~~~~~~s-~~~~~~~~~~~iv~~S~SK~~~l~GlRlG~~i~~~~~~ 233 (354)
T PRK04635 158 NPTGTVIDRAD-IEQLIEMTP--DAIVVVDEAYIEFCPEYS-VADLLASYPNLVVLRTLSKAFALAGARCGFTLANEELI 233 (354)
T ss_pred CCCCccCCHHH-HHHHHHhCC--CcEEEEeCchHhhccCcc-hHHHHhhCCCEEEEechHHHhhhhHHHHhhhhCCHHHH
Confidence 77888887333 555555444 599999999987732111 111111223433 7999999 899999999999999
Q ss_pred HhhcCCCCccccCCCCCcHHHHHHHHHHHHHh--cC-CCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEe
Q 011856 333 EMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRL--KE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFT 409 (476)
Q Consensus 333 ~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~--~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~ 409 (476)
+.+... ...++.+.+.+.++.++|+.. +. .+..++++++++++.+.|+++ +.....++.|.++++.+.
T Consensus 234 ~~l~~~-----~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~----~~~~~~~~~g~f~~~~~~ 304 (354)
T PRK04635 234 EILMRV-----IAPYPVPLPVSEIATQALSEAGLARMKFQVLDLNAQGARLQAALSMY----GGAKVLEGNGNYVLAKFD 304 (354)
T ss_pred HHHHhh-----cCCCCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhC----CCceECCCCCcEEEEECC
Confidence 887631 124566777777777777421 10 222334445555555555543 312223456777777653
Q ss_pred cCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCC----CcceEEeCCCcHHHHHHHHHHHHHH
Q 011856 410 EGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ----FEAGFTSLAHSSDDIQHTITAAEKV 470 (476)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~----~~~~~~~~~~t~e~i~~~~~~l~~~ 470 (476)
+ ..++.+.|.++||.++... .+.+|+++. +++|+++++++|++-
T Consensus 305 ~----------------~~~~~~~l~~~gv~v~~~~~~~~~~~lRis~~-~~e~~~~l~~al~~~ 352 (354)
T PRK04635 305 D----------------VDAVFKALWDAGIVARAYKDPRLANCIRFSFS-NRAETDKLIGLIRNQ 352 (354)
T ss_pred C----------------HHHHHHHHHHCCEEEEECCCCCCCCeEEEEeC-CHHHHHHHHHHHHHh
Confidence 1 1467788889999997653 245788865 789999999998753
No 216
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.88 E-value=1.6e-21 Score=184.31 Aligned_cols=321 Identities=20% Similarity=0.244 Sum_probs=219.7
Q ss_pred EEecccChhhccCCC--CcHHHHHHHHHHHHh-cCCC------CCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHH
Q 011856 101 YIDYVGSWGPAIIGH--ADDQVLAALGETMKK-GTSF------GAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGV 171 (476)
Q Consensus 101 ~iD~~~~~~~~~lG~--~~p~v~~a~~~~l~~-~~~~------~~~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~a 171 (476)
.|++.+- |+||. ++-...+++.+.+++ +... -+..+.+.++.+.++++. +.+..++.+-|..+|...
T Consensus 138 ~lNlgSY---NYLGFa~~~g~ca~~~~~~~~kygl~~css~~e~G~~~~hkelE~l~A~f~-g~e~a~vF~mGf~TNs~~ 213 (519)
T KOG1357|consen 138 CLNLGSY---NYLGFAQSVGPCAEASLKSFDKYGLSRCSSRHEAGTTEEHKELEELVARFL-GVEDAIVFSMGFATNSMN 213 (519)
T ss_pred eeeeccc---ccccccccCCcCChHHHHHHHHhcccccccchhcccHHHHHHHHHHHHHhc-CCcceEEEeccccccccC
Confidence 4565554 88887 344445555555555 2111 135677888999898888 566666666678888777
Q ss_pred HHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhc---------
Q 011856 172 LRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFEN--------- 242 (476)
Q Consensus 172 l~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~--------- 242 (476)
+. .+-++...|+.+.-.|++....+ +..++.+..+.|||+++||++|++
T Consensus 214 ~p---~l~~~gsLIiSDelNHaSi~~Ga-------------------RLSgAtiRVfkHNdm~~LEr~Lrd~I~~gqP~T 271 (519)
T KOG1357|consen 214 IP---SLLGKGSLIISDELNHASLITGA-------------------RLSGATTRVFRHNDMQGLERLLRDAIVYGQPKT 271 (519)
T ss_pred cc---eeecCCcceeeccccchheeccc-------------------cccCceEEEEecCCHHHHHHHHHHHHhcCCCCc
Confidence 77 56678888888888998654333 233446888999999999999975
Q ss_pred C-CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccc-cCc-cccccchhhccCCCC---chh--hhhh
Q 011856 243 N-KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM-TGF-RLAYGGAQEYFGVTP---DLT--TLGK 314 (476)
Q Consensus 243 ~-~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~-~g~-r~g~~~~~~~~g~~p---Di~--t~sK 314 (476)
+ +.+...|++|.++++.|.+.. |.++.++++||.++|+.||+| .|. ..+..+..+++++.| ||+ ||.|
T Consensus 272 hrp~kki~iivegiysmEg~iv~----Lp~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftK 347 (519)
T KOG1357|consen 272 HRPWKKILICVEGIYSMEGTIVD----LPEVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTK 347 (519)
T ss_pred CCcchheeeeeccceeccCeecc----cHHHHHhhccccEEEEeeccccccccCCCCcceeeccCCCchhheeecceehh
Confidence 2 234567888999999999999 888999999999999999999 455 455567888999876 443 7999
Q ss_pred hcCCCCcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC-------CCHHHHHHHHHHHHHHHHHHH
Q 011856 315 IIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-------PGTYEYLNKITGELTQGIIDA 387 (476)
Q Consensus 315 ~lg~G~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-------~~~~~~~~~~~~~l~~~L~~~ 387 (476)
+++++ .|++.+++++++.++.........+ +.+|+.++-.+..++.+.. ....+++.++..+++..|+..
T Consensus 348 Sfga~--GGyiagsk~lid~lrt~s~~~~yat-~~sppvaqq~~ssl~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~~ 424 (519)
T KOG1357|consen 348 SFGAA--GGYIAGSKELIDYLRTPSPSALYAT-SLSPPVAQQILTSVKHIMGEDGTNRGRQKIERLAENSRYFRWELQKM 424 (519)
T ss_pred hcccc--cceecCcHHHHhhhccCCCceeecc-cCChHHHHHHHHHHHhhcCCCcccHHHHHHHHHHhhhHHHHHhhhcC
Confidence 99862 6778899999999875333333334 3455555666777777653 345677888888888887765
Q ss_pred hhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCCcc---------eEEeCCCcHH
Q 011856 388 GKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEA---------GFTSLAHSSD 458 (476)
Q Consensus 388 ~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~---------~~~~~~~t~e 458 (476)
+. +..-......+.+-+. .......+.+.|+++++-+...+++. ++++..||.|
T Consensus 425 gf----ivyG~~dSpVvplll~-------------~~~k~~~f~r~~l~~nigvVvvgfPatpl~e~r~R~c~Sa~ht~e 487 (519)
T KOG1357|consen 425 GF----IVYGNNDSPVVPLLLY-------------GPAKIVAFSREMLERNIGVVVVGFPATPLLESRARFCLSASHTKE 487 (519)
T ss_pred cE----EEecCCCCCcceeeec-------------CcccccHHHHHHHhcCceEEEEeCCCchHHHhHHHhhhcccccHH
Confidence 32 1100011111111111 11122567889999877665555443 3457899999
Q ss_pred HHHHHHHHHHHHH
Q 011856 459 DIQHTITAAEKVK 471 (476)
Q Consensus 459 ~i~~~~~~l~~~~ 471 (476)
++|++++.++++-
T Consensus 488 ~ld~~l~~i~~~g 500 (519)
T KOG1357|consen 488 DLDRALEVIDRVG 500 (519)
T ss_pred HHHHHHHHHhhhc
Confidence 9999999998764
No 217
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=99.88 E-value=7.5e-20 Score=169.72 Aligned_cols=321 Identities=15% Similarity=0.137 Sum_probs=203.4
Q ss_pred CcHHHHHHHHHHHHhcCCCCC-C----CHHHHHHHHHHHhhCC---CCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEE
Q 011856 116 ADDQVLAALGETMKKGTSFGA-P----CLLENVLAEMVISAVP---SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKF 187 (476)
Q Consensus 116 ~~p~v~~a~~~~l~~~~~~~~-~----~~~~~~la~~l~~~~~---~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~ 187 (476)
..++..+|+.+++..+...+| | ...+.+.|+.+.+..+ .+++|++|+|+++|++.++.. ....+.+|++.
T Consensus 79 ts~~a~~Av~~al~Sgk~N~Yaps~G~~~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAIe~~i~~--LA~p~aNILlP 156 (447)
T KOG0259|consen 79 TSQEAEQAVVDALRSGKGNGYAPSVGILPARRAVAEYLNRDLPNKLTADDVVLTSGCSQAIELAISS--LANPGANILLP 156 (447)
T ss_pred CCHHHHHHHHHHHhcCCCCCcCCccccHHHHHHHHHHhhcCCCCccCcCceEEeccchHHHHHHHHH--hcCCCCceecC
Confidence 467899999999988754443 2 3456677777666555 579999999999999999985 23567889998
Q ss_pred eCCCCCCchhHHhhcCCCCccCCC-CCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCH
Q 011856 188 EGCYHGHADPFLVKAGSGVATLGL-PDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKP 266 (476)
Q Consensus 188 ~~~yhg~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~ 266 (476)
.++|.- ++......+..+..+.+ |... ..+ |++.+|.++.++ ..+.||++|.|+.|++ .++
T Consensus 157 rPGfp~-Y~~~a~~~~lEVR~ydlLPe~~----------weI---DL~~veal~DEN--T~AivviNP~NPcGnV--ys~ 218 (447)
T KOG0259|consen 157 RPGFPL-YDTRAIYSGLEVRYYDLLPEKD----------WEI---DLDGVEALADEN--TVAIVVINPNNPCGNV--YSE 218 (447)
T ss_pred CCCCch-HHHhhhhcCceeEeecccCccc----------cee---chHHHHHhhccC--eeEEEEeCCCCCCccc--ccH
Confidence 888754 33333333444433222 2111 111 899999999864 6677777887766543 356
Q ss_pred HHHHHHHHHHHHhCCEEEEeccccCc-cccccc-hhhcc-CCCCchh--hhhhhcC-CCCcEEEEEecHH--------HH
Q 011856 267 DFLNAIRRITKENGALLIFDEVMTGF-RLAYGG-AQEYF-GVTPDLT--TLGKIIG-GGLPVGAYGGRRD--------IM 332 (476)
Q Consensus 267 ~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~-~~~~~-g~~pDi~--t~sK~lg-~G~~iG~~~~~~~--------i~ 332 (476)
+-|++|.++|+|+|+++|.||||..+ ..+..| ....| .+.|-++ .+||.+- .|||+||++.++. ++
T Consensus 219 ~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiVPVitlggisKrW~VPGWRlGWi~~hD~~gvf~~~~~~ 298 (447)
T KOG0259|consen 219 DHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIVPVITLGGISKRWIVPGWRLGWIALHDPRGVFRDTKVV 298 (447)
T ss_pred HHHHHHHHHHHHhCCeEEehhhcceeecCCCCccchhhccccCceEeecccccccccCCceeeeEEEecccccccchHHH
Confidence 66999999999999999999999776 444332 22223 3455443 4789876 8999999976542 12
Q ss_pred HhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHH----HHHHHHHHHHHHHHHHHhhhcCCce-EeeeeceeEEE-
Q 011856 333 EMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTY----EYLNKITGELTQGIIDAGKKAGHAI-CGGYISGMFGF- 406 (476)
Q Consensus 333 ~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~----~~~~~~~~~l~~~L~~~~~~~~~~~-~v~~~g~~~~i- 406 (476)
+.+.+ +.. -+.+.+.+.|+|.-.-|+.-. +++. .-++.+.+...++|++ .|... .++..|.|+.+
T Consensus 299 q~~~~---~~~-~~~~p~TiiQ~AlP~IL~kTp-~efF~k~~~~lk~na~l~y~~Lk~----IP~l~cp~kPeg~mylmv 369 (447)
T KOG0259|consen 299 QGIKN---FLD-IIPGPATIIQGALPDILEKTP-EEFFDKKLSFLKSNADLCYSRLKD----IPCLTCPVKPEGCMYLMV 369 (447)
T ss_pred HHHHH---HHh-ccCCccHhHHHHhHHHHHhCh-HHHHHHHHHHHHhhHHHHHHHHhc----CCCcccCcCCCcceEEEe
Confidence 22221 111 233444555554444443211 3333 3344444545555554 44333 56677776544
Q ss_pred EEecCCCcCchhhcccchHHHHHHHHHHH-HCCeEeccCC----CcceEEeCCCcHHHHHHHHHHHHHHHHH
Q 011856 407 FFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ----FEAGFTSLAHSSDDIQHTITAAEKVKMR 473 (476)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~----~~~~~~~~~~t~e~i~~~~~~l~~~~~~ 473 (476)
.+.-. .+ ++-..-..|++.|. |+.+++-|+. .+.+|+++....+.+++++++|++++.+
T Consensus 370 ~l~~s---~~-----~~~~dD~dFc~kL~~Eesv~~LPG~af~~~nw~Ri~i~~~~~~leea~~Rik~Fc~R 433 (447)
T KOG0259|consen 370 KLNLS---LF-----PDIEDDVDFCQKLAREESVICLPGQAFGLKNWLRIVITVEEEMLEEAFSRIKEFCDR 433 (447)
T ss_pred ccchh---hh-----ccccccHHHHHHHhhhcceEEeccccccCCCeEEEEEccChHHHHHHHHHHHHHHHh
Confidence 33211 11 11122246666665 7789998874 4567899999999999999999998865
No 218
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.88 E-value=3.1e-21 Score=195.75 Aligned_cols=337 Identities=16% Similarity=0.121 Sum_probs=187.7
Q ss_pred cCCCC-cHHHHHHHHHHHHhcCCCCC---CCHHHHHHHHHHHhh-C-C---C--CCeEEEeCCHHHHHHHHHHHHH---h
Q 011856 112 IIGHA-DDQVLAALGETMKKGTSFGA---PCLLENVLAEMVISA-V-P---S--IEMVRFVNSGTEACMGVLRLAR---A 177 (476)
Q Consensus 112 ~lG~~-~p~v~~a~~~~l~~~~~~~~---~~~~~~~la~~l~~~-~-~---~--~e~v~~~~sGseA~~~al~~ar---~ 177 (476)
..+.. ++.|.+ +.+.+. +..|.. ..++++++++.+.+. . . . .++|++|+|+++|+..++.... .
T Consensus 109 ~p~~~~~~~v~e-~~~~~~-~~~Y~~~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I~vT~Ga~~al~~~~~aL~~~~l 186 (527)
T PRK09275 109 QLGFDADEFVYE-LVDGII-GDNYPVPDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFAVEGGTAAMCYIFDSLKENGL 186 (527)
T ss_pred CCCCCCCHHHHH-HHHHHh-cCCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHHhhhhc
Confidence 34554 445556 555553 333332 236667777644432 1 1 1 3489999999999999988421 2
Q ss_pred ccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCC--CCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEccc
Q 011856 178 FTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPD--SPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPV 255 (476)
Q Consensus 178 ~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~ 255 (476)
..+++.|++.+++|..+... ....+.+.....++. ..++ . -|+++|+++++. ++++|+++..
T Consensus 187 l~pGD~Vlv~~P~y~~Y~~~-~~l~g~~~~~v~v~~~~~~~f-----------~-~d~~~l~~~~~~---~tkai~l~nP 250 (527)
T PRK09275 187 LKAGDKIALMTPIFTPYLEI-PELPRYDLEVVHINADEENEW-----------Q-YPDSELEKLRDP---SIKALFLVNP 250 (527)
T ss_pred CCCCCEEEEeCCChHHHHHH-HHHcCCCeEEEEeecCcccCC-----------C-CCHHHHHhhcCC---CCCEEEEeCC
Confidence 45678899999999875433 233332222111111 0111 0 168888887653 5666665444
Q ss_pred CCCCCcccCCHHHHHHHHHHHHH--hCCEEEEeccccCccccccchhhccCCCCc----hhhhhhhcC-CCCcEEEEEec
Q 011856 256 VGNSGFIAPKPDFLNAIRRITKE--NGALLIFDEVMTGFRLAYGGAQEYFGVTPD----LTTLGKIIG-GGLPVGAYGGR 328 (476)
Q Consensus 256 ~~~~G~i~~~~~~l~~l~~l~~~--~g~llI~DEv~~g~r~g~~~~~~~~g~~pD----i~t~sK~lg-~G~~iG~~~~~ 328 (476)
+|++|.+.+.+ .+++|.++|++ +|++||+||+|..|....... ....|+ +.+|||.++ +|||+||++++
T Consensus 251 ~NPTG~v~s~e-~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~s~---~~~~~~~~I~v~SfSK~f~mtG~RlG~i~~~ 326 (527)
T PRK09275 251 SNPPSVAMSDE-SLEKIADIVNEKRPDLMIITDDVYGTFVDDFRSL---FAVLPYNTILVYSFSKYFGATGWRLGVIALH 326 (527)
T ss_pred cCCcCCCCCHH-HHHHHHHHHHhcCCCcEEEECCCChhhcccccCH---HHhCCCCEEEEeehhhhccCcHhHHhhhhcC
Confidence 56677777644 49999999965 499999999998772111111 111232 237999998 89999999998
Q ss_pred HH-----HHHhh-----------------------------cCCCCccccCCCCCcHHHHHH-HHHHH-HHhcC-CCHHH
Q 011856 329 RD-----IMEMV-----------------------------APAGPMYQAGTLSGNPLAMTA-GIHTL-KRLKE-PGTYE 371 (476)
Q Consensus 329 ~~-----i~~~l-----------------------------~~~~~~~~~~t~~~~~~~~aa-a~aal-~~~~~-~~~~~ 371 (476)
++ +++.+ ..........|.+.+.+.|.+ ++.++ ..++. +++.
T Consensus 327 ~~~v~~~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~~t~~~s~p~Q~a~al~~~~all~~~~~~~- 405 (527)
T PRK09275 327 EDNVFDKLIAKLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALLDEEDAYK- 405 (527)
T ss_pred chhHHHHHHHhccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHhCchHHH-
Confidence 76 33322 000122233456667666665 32111 11222 2222
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCce--EeeeeceeEEEEEecCC----CcCchhhcccchHHHHHHHHHHH-HCCeEeccC
Q 011856 372 YLNKITGELTQGIIDAGKKAGHAI--CGGYISGMFGFFFTEGP----VYNFEDAKKSETTKFARFYRGML-EEGVYFAPS 444 (476)
Q Consensus 372 ~~~~~~~~l~~~L~~~~~~~~~~~--~v~~~g~~~~i~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~ 444 (476)
+++.+.++++...+....+... ..+..+.++++++.... ...+...... .....+|+..|+ +.||.+.|+
T Consensus 406 --~~~~~~~~~Rr~~l~~~Lg~~~~~~~p~g~fY~~~di~~~~~~~~g~~f~~~l~~-~~~~~~f~~~Ll~e~gV~v~PG 482 (527)
T PRK09275 406 --KAMKDIIRRRYKALYEGLGLPEPEDPNNAAYYTLIDLEEWAEKNYGKEFADYLKK-NYSPVDLLFRLAEETGVVLLPG 482 (527)
T ss_pred --HHHHHHHHHHHHHHHHHcCCCCcCCCCCeeEEEEEEhHHhhhhccCchhhhhhhc-cCCHHHHHHHHHhcCCEEEeCc
Confidence 2233333333322222223221 22344556666653210 0011110000 011256666666 569999887
Q ss_pred C-----CcceEEeCC-CcHHHHHHHHHHHHHHHHHh
Q 011856 445 Q-----FEAGFTSLA-HSSDDIQHTITAAEKVKMRF 474 (476)
Q Consensus 445 ~-----~~~~~~~~~-~t~e~i~~~~~~l~~~~~~~ 474 (476)
. .+++|++++ .+++++.++.++|.+++++.
T Consensus 483 ~~Fg~~~~~vRis~a~~~~~~~~~~~~rl~~~l~~y 518 (527)
T PRK09275 483 GGFGGPEWSVRVSLANLNEEDYAKIGKAIRKLLDEY 518 (527)
T ss_pred hhhCCCCCeEEEEEecCCHHHHHHHHHHHHHHHHHH
Confidence 3 235899988 58899999999999998764
No 219
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.88 E-value=8.3e-20 Score=183.83 Aligned_cols=328 Identities=15% Similarity=0.156 Sum_probs=206.0
Q ss_pred CCEEEecccChhhccCCCCcHHHHHHHHHHHHhcCCC---CC------CCHHHHHHHHHHHhhCC--CCCeEEEeCCHHH
Q 011856 98 GNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSF---GA------PCLLENVLAEMVISAVP--SIEMVRFVNSGTE 166 (476)
Q Consensus 98 G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~---~~------~~~~~~~la~~l~~~~~--~~e~v~~~~sGse 166 (476)
+..|+|-.+. |..++.+.+++.+.++..... +. ..+...++.+.++++++ ..++|+|++|+++
T Consensus 19 ~~~yld~a~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~~~~~t~ 92 (401)
T PRK10874 19 AGVYLDSAAT------ALKPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNAPDAKNIVWTRGTTE 92 (401)
T ss_pred ceEEEeCCcc------cCCCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCHHH
Confidence 3467775543 446789999998888652111 11 12345677788888886 3678999999999
Q ss_pred HHHHHHHHHH--hccCCceEEEEeCCCCCCchhHH---hhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHh
Q 011856 167 ACMGVLRLAR--AFTGRERIIKFEGCYHGHADPFL---VKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFE 241 (476)
Q Consensus 167 A~~~al~~ar--~~~~~~~ii~~~~~yhg~~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~ 241 (476)
++..+++... ...++++|++.+..|++...... ...|..+...+... .+ ..|++++++.++
T Consensus 93 ~i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~-~~-------------~~d~~~l~~~i~ 158 (401)
T PRK10874 93 SINLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGA-DR-------------LPDVDLLPELIT 158 (401)
T ss_pred HHHHHHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEecCC-CC-------------cCCHHHHHHhcC
Confidence 9999988531 12456788888888776432222 22343332221111 00 117899999886
Q ss_pred cCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-CccccccchhhccCCCCchhh--hhhhcCC
Q 011856 242 NNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GFRLAYGGAQEYFGVTPDLTT--LGKIIGG 318 (476)
Q Consensus 242 ~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~r~g~~~~~~~~g~~pDi~t--~sK~lg~ 318 (476)
. ++++|++..+++.+|.+.| +++|.++|+++|+++|+|++|. |... .+.....+|+++ ++|.+|.
T Consensus 159 ~---~t~lv~i~~~~n~tG~~~~----~~~i~~l~~~~g~~~ivD~a~~~g~~~-----~~~~~~~~d~~~~s~~K~~gp 226 (401)
T PRK10874 159 P---RTRILALGQMSNVTGGCPD----LARAITLAHQAGMVVMVDGAQGAVHFP-----ADVQALDIDFYAFSGHKLYGP 226 (401)
T ss_pred c---CcEEEEEeCCcccccCcCC----HHHHHHHHHHcCCEEEEECCccccccc-----CCchhcCCCEEEEecccccCC
Confidence 3 5778888888888999988 9999999999999999999995 2111 111122467664 5597762
Q ss_pred CCcEEEEEecHHHHHhhcCCC---Cc---------------cccCCCCCcHHHHHHHHHHHHHhcC---CCHHHHHHHHH
Q 011856 319 GLPVGAYGGRRDIMEMVAPAG---PM---------------YQAGTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKIT 377 (476)
Q Consensus 319 G~~iG~~~~~~~i~~~l~~~~---~~---------------~~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~ 377 (476)
-.+|++++++++++.+.+.. .. ..+...+.|..++.+..++++.+.+ ....++.+++.
T Consensus 227 -~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~~~~~~~l~ 305 (401)
T PRK10874 227 -TGIGVLYGKSELLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQAESWSRSLA 305 (401)
T ss_pred -CccEEEEEchHHHhcCCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence 12699999999888765310 00 0000113455667777777776654 23455555666
Q ss_pred HHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCC------------
Q 011856 378 GELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ------------ 445 (476)
Q Consensus 378 ~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~------------ 445 (476)
+++++.|+++. ++.......+.++.+.+... ...++.+.|.++||.++++.
T Consensus 306 ~~l~~~l~~~~---g~~~~~~~~~~i~~~~~~~~--------------~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~g~ 368 (401)
T PRK10874 306 TLAEDALAKLP---GFRSFRCQDSSLLAFDFAGV--------------HHSDLVTLLAEYGIALRAGQHCAQPLLAALGV 368 (401)
T ss_pred HHHHHHHhcCC---CEEEeCCCCCcEEEEEECCc--------------CHHHHHHHHHHCCcEEeccccchHHHHHHhCC
Confidence 66666665431 22111112344555554210 12467788889999988753
Q ss_pred CcceEEe--CCCcHHHHHHHHHHHHHHHHHhh
Q 011856 446 FEAGFTS--LAHSSDDIQHTITAAEKVKMRFL 475 (476)
Q Consensus 446 ~~~~~~~--~~~t~e~i~~~~~~l~~~~~~~~ 475 (476)
...+|++ ..+|++|+|+++++|+++++.+.
T Consensus 369 ~~~iRiS~~~~nt~edid~ll~al~~~~~~~~ 400 (401)
T PRK10874 369 TGTLRASFAPYNTQSDVDALVNAVDRALELLV 400 (401)
T ss_pred CCEEEEEecccCCHHHHHHHHHHHHHHHHHhc
Confidence 2346775 45699999999999999887653
No 220
>PRK08637 hypothetical protein; Provisional
Probab=99.87 E-value=3.6e-20 Score=185.42 Aligned_cols=303 Identities=13% Similarity=0.086 Sum_probs=187.9
Q ss_pred CHHHHHHHHHHHhhCC--C---CCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCC
Q 011856 138 CLLENVLAEMVISAVP--S---IEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLP 212 (476)
Q Consensus 138 ~~~~~~la~~l~~~~~--~---~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~ 212 (476)
.+++..+++.+.+..+ . .+++++|+|+++++..+++.. ...++.|++.+++|...........|..+...+..
T Consensus 47 ~~lr~~ia~~~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l--~~~gd~Vlv~~P~y~~~~~~~~~~~g~~vv~v~~~ 124 (388)
T PRK08637 47 PELRDLWQEKMLRENPSLSGKKMSLPIVTNALTHGLSLVADLF--VDQGDTVLLPDHNWGNYKLTFNTRRGAEIVTYPIF 124 (388)
T ss_pred HHHHHHHHHHHhccCccccccccceeeEccchHHHHHHHHHHh--cCCCCEEEEcCCCCccHHHHHHHhcCCEEEEeccc
Confidence 4556666666654432 2 257899999999999998842 23557788888888775543333455544433321
Q ss_pred -CCCCCCCCCCCceeeccCCCHHHHHHHHhc-CCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHH-----hCCEEEE
Q 011856 213 -DSPGVPKGATYETLTAPFNDVSALENLFEN-NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKE-----NGALLIF 285 (476)
Q Consensus 213 -~~~~~~~~~~~~~~~~~~~d~~~le~~l~~-~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~-----~g~llI~ 285 (476)
...++ |++++++.++. ..+...++++...+|++|.+.+..+ +++|.++|++ |+++||+
T Consensus 125 ~~~~~~--------------d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG~~~s~~~-~~~l~~~~~~~~~~~~~~~iI~ 189 (388)
T PRK08637 125 DEDGGF--------------DTDALKEALQAAYNKGKVIVILNFPNNPTGYTPTEKE-ATAIVEAIKELADAGTKVVAVV 189 (388)
T ss_pred CCCCcC--------------CHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCHHH-HHHHHHHHHHHHhcCCcEEEEe
Confidence 11122 78999988862 1123444555544666787766555 9999998886 9999999
Q ss_pred eccccCc-cccccc-h-h-hccCCCCch--h---hhhhhcC-CCCcEEEEEec------HHHHHhhcCCCC-ccccCCCC
Q 011856 286 DEVMTGF-RLAYGG-A-Q-EYFGVTPDL--T---TLGKIIG-GGLPVGAYGGR------RDIMEMVAPAGP-MYQAGTLS 348 (476)
Q Consensus 286 DEv~~g~-r~g~~~-~-~-~~~g~~pDi--~---t~sK~lg-~G~~iG~~~~~------~~i~~~l~~~~~-~~~~~t~~ 348 (476)
||+|.+| ..+... . . ...+...++ + ++||.++ +|+|+||++.+ +++++.+..... ......++
T Consensus 190 De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 269 (388)
T PRK08637 190 DDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFITFGTKAGSSQTVKEALEKKVKGLIRSNISN 269 (388)
T ss_pred cccchhcccCCccchhhHHHhhcccccceEEEeccccccCCCcccceEEEEEccccCCcHHHHHHHHHHHHHHhhcccCC
Confidence 9999888 544321 1 1 111222342 2 6999877 79999999743 677776642100 01112346
Q ss_pred CcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH---HHHhhhcC----CceEeeeeceeEEEEEecCCCcCchhhcc
Q 011856 349 GNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGI---IDAGKKAG----HAICGGYISGMFGFFFTEGPVYNFEDAKK 421 (476)
Q Consensus 349 ~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L---~~~~~~~~----~~~~v~~~g~~~~i~~~~~~~~~~~~~~~ 421 (476)
.|.+++.++.+.|+ ++.+.++++++...++++. .+....++ +....+..|.++++.+..
T Consensus 270 ~s~~~q~a~~~~l~---~~~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~l~~----------- 335 (388)
T PRK08637 270 GPHPSQSAVLRALN---SPEFDKEKQEKFQILKERYEKTKEVLYDGKYDDAWQAYPFNSGYFMCLKLKG----------- 335 (388)
T ss_pred CCcHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccccccceEEEEecCCh-----------
Confidence 78888888887774 3344445544444443332 22222221 222223456677777631
Q ss_pred cchHHHHHHHHHHH-HCCeEeccCCCcceEEeCC-CcHHHHHHHHHHHHHHHHHh
Q 011856 422 SETTKFARFYRGML-EEGVYFAPSQFEAGFTSLA-HSSDDIQHTITAAEKVKMRF 474 (476)
Q Consensus 422 ~~~~~~~~~~~~l~-~~Gv~~~~~~~~~~~~~~~-~t~e~i~~~~~~l~~~~~~~ 474 (476)
....++.+.|+ ++||.+.+.+...+|+++. .+++++++++++|.++++.+
T Consensus 336 ---~~~~~l~~~l~~~~gv~~~~~~~~~iRi~~~~~~~~~i~~~~~~l~~~~~~~ 387 (388)
T PRK08637 336 ---VDAEELRVHLLEKYGIGTIALNETDLRIAFSCVEEEDIPELFDSIYKAIKDL 387 (388)
T ss_pred ---HHHHHHHHHHhhhcceEEEeccCCceEEEeecCCHHHHHHHHHHHHHHHHhc
Confidence 12357888886 5799887665567888765 58999999999999998754
No 221
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.87 E-value=1.7e-19 Score=178.75 Aligned_cols=318 Identities=17% Similarity=0.193 Sum_probs=198.8
Q ss_pred CcHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCC-CC--CeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCC
Q 011856 116 ADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-SI--EMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYH 192 (476)
Q Consensus 116 ~~p~v~~a~~~~l~~~~~~~~~~~~~~~la~~l~~~~~-~~--e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yh 192 (476)
.+|.+.+++........ ....+...++.+.+++++. .. ..++++.||+++++.++... ..+++++++..++++
T Consensus 10 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~--~~~~~~vi~~~~~~~ 85 (355)
T TIGR03301 10 TSATVRDAMLVDWCHWD--SEFNDVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSL--VPRDGKLLVLINGAY 85 (355)
T ss_pred CCHHHHHHhhhhccCCC--HHHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhc--cCCCCeEEEECCCch
Confidence 35677777665222110 0113667788888888875 22 26788999999999999852 345677888877777
Q ss_pred CCc-hhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHH
Q 011856 193 GHA-DPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNA 271 (476)
Q Consensus 193 g~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~ 271 (476)
+.. .......|..+...+.+... ..|++++++.+++++ +++.+++..+++.+|.+.+ +++
T Consensus 86 ~~~~~~~a~~~g~~~~~i~~~~~~--------------~~d~~~l~~~l~~~~-~~~~v~~~~~~~~~G~~~~----~~~ 146 (355)
T TIGR03301 86 GERLAKICEYLGIPHTDLNFSEYE--------------PPDLNRIEEALAADP-DITHVATVHHETTTGILNP----LEA 146 (355)
T ss_pred hhHHHHHHHHcCCceEEEecCCCC--------------CCCHHHHHHHHHhCC-CceEEEEEecCCcccchhH----HHH
Confidence 753 22233334433222111111 127999999997642 4555555555566788888 899
Q ss_pred HHHHHHHhCCEEEEeccccCccccccchhhccCCCCchhhhhhhcCCCCcEEEEEecHHHHHhhcCCCCcc---------
Q 011856 272 IRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMY--------- 342 (476)
Q Consensus 272 l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pDi~t~sK~lg~G~~iG~~~~~~~i~~~l~~~~~~~--------- 342 (476)
|.++|++||+++|+|++++ +. +..+....+++..-+.+++|+++++..+|++++++++++.+......+
T Consensus 147 i~~l~~~~~~~livD~~~s-~g-~~~~~~~~~~~d~~~~s~~K~l~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (355)
T TIGR03301 147 IAKVARSHGAVLIVDAMSS-FG-AIPIDIEELDVDALIASANKCLEGVPGFGFVIARRDLLEASAGNARSLYLDLYDQWA 224 (355)
T ss_pred HHHHHHHcCCEEEEEeccc-cC-CcccchhhcCccEEEecCCcccccCCceeEEEECHHHHHHhhCCCCCceeeHHHHHH
Confidence 9999999999999999885 31 011222223332223478999875545899999999988875211110
Q ss_pred -----ccCCCCCcHHHHHHHHHHHHHhcC----CCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCC
Q 011856 343 -----QAGTLSGNPLAMTAGIHTLKRLKE----PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPV 413 (476)
Q Consensus 343 -----~~~t~~~~~~~~aaa~aal~~~~~----~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~ 413 (476)
....++.+...+.++.++++.+.+ ++..++++++.+++++.|+++..+.. .......+.++++.+...+
T Consensus 225 ~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~g~~~~-~~~~~~~~~~~~~~~~~~~- 302 (355)
T TIGR03301 225 YMEKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRALGFQPL-LPERWQSPIIVSFLYPDDP- 302 (355)
T ss_pred HhhhcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcCCeee-cCCCCCCCcEEEEECCCCC-
Confidence 012345677777888888887644 33556677777888888776421110 0011123445555553210
Q ss_pred cCchhhcccchHHHHHHHHHHHHCCeEeccCCC---cceEEeC--CCcHHHHHHHHHHHHHH
Q 011856 414 YNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF---EAGFTSL--AHSSDDIQHTITAAEKV 470 (476)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~---~~~~~~~--~~t~e~i~~~~~~l~~~ 470 (476)
.....++.+.|.++||.+.++.. +.+|++. .++++|++++++.|+++
T Consensus 303 ----------~~~~~~~~~~l~~~gi~i~~~~~~~~~~iRis~~~~~~~~~i~~~~~~l~~~ 354 (355)
T TIGR03301 303 ----------DFDFDDFYQELKERGFVIYPGKLTLADTFRIGTIGEIDAADIERLLEAIKDA 354 (355)
T ss_pred ----------cchHHHHHHHHHHCCEEEECCccccccEEEEecCCCCCHHHHHHHHHHHHhh
Confidence 01235788899999999988742 4678854 45999999999999875
No 222
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.87 E-value=1.8e-19 Score=182.25 Aligned_cols=333 Identities=13% Similarity=0.054 Sum_probs=193.5
Q ss_pred HHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhH
Q 011856 119 QVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPF 198 (476)
Q Consensus 119 ~v~~a~~~~l~~~~~~~~~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~ 198 (476)
.+.+++.+++..+...+.+.....+|.+.+++++ +.+.+++++||++|+..+++. +.++++||..++.|.. +...
T Consensus 58 a~~~a~~~a~~~g~~~Y~~~~g~~~Lreaia~~~-~~~~vv~t~ggt~A~~~~~~a---ll~pGDVii~~p~~~~-~~~~ 132 (460)
T PRK13238 58 AMSDRQWAAMMRGDEAYAGSRSYYRLEDAVKDIF-GYPYTIPTHQGRAAEQILFPV---LIKKGDVVPSNYHFDT-TRAH 132 (460)
T ss_pred hhhHHHHHHHHhCCcccCCCCCHHHHHHHHHHHh-CCCcEEECCCHHHHHHHHHHH---hCCCCCEEccCCcccc-hHHH
Confidence 5788888888765433334445567777777777 667899999999999999873 4444447766665554 3344
Q ss_pred HhhcCCCCccCCCCCCCCCCCCCCCceeeccC-CCHHHHHHHHhcCC-CCeEEEEEcccCCCCC-cccCCHHHHHHHHHH
Q 011856 199 LVKAGSGVATLGLPDSPGVPKGATYETLTAPF-NDVSALENLFENNK-GEIAAIILEPVVGNSG-FIAPKPDFLNAIRRI 275 (476)
Q Consensus 199 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~le~~l~~~~-~~~a~vi~ep~~~~~G-~i~~~~~~l~~l~~l 275 (476)
+...|..+...+....... . . ...+.. -|+++|++.+++++ +++++|+++..+|++| .+.+ .+.+++|+++
T Consensus 133 i~~~G~~~v~v~~~~~~~~-~--~--~~~f~g~id~e~Le~~i~~~~~~~tk~Ivl~~p~NptGG~v~s-~~~l~~I~~i 206 (460)
T PRK13238 133 IELNGATAVDLVIDEALDT-G--S--RHPFKGNFDLEKLEALIEEVGAENVPFIVMTITNNSAGGQPVS-MANLRAVYEI 206 (460)
T ss_pred HHHcCCEEEEEeccccccc-c--c--cccccCCcCHHHHHHHHhhcCCCceeEEEEecCCCCCCCcCCC-HHHHHHHHHH
Confidence 4445544332222110000 0 0 000010 28999999997543 4688888887766655 5554 5569999999
Q ss_pred HHHhCCEEEEeccccC--c-cc-----cccchhhccCCCCchhhhhhhcC-CCCc-----EEEE-Eec-HHHHHhhcCCC
Q 011856 276 TKENGALLIFDEVMTG--F-RL-----AYGGAQEYFGVTPDLTTLGKIIG-GGLP-----VGAY-GGR-RDIMEMVAPAG 339 (476)
Q Consensus 276 ~~~~g~llI~DEv~~g--~-r~-----g~~~~~~~~g~~pDi~t~sK~lg-~G~~-----iG~~-~~~-~~i~~~l~~~~ 339 (476)
|++||++||+|++|.. . .. +.... ...++...+.+++|.+. +|++ .|++ +++ +++++.++...
T Consensus 207 a~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~-si~~i~~~~~s~~D~~~~Sg~K~g~~~~GG~i~~~d~~l~~~~~~~~ 285 (460)
T PRK13238 207 AKKYGIPVVIDAARFAENAYFIKQREPGYKDK-SIKEIAREMFSYADGLTMSAKKDAMVNIGGLLCFRDEDLFTECRTLC 285 (460)
T ss_pred HHHcCCEEEEECcchhhhhhhhhhccccccCC-CHHHHhhhhcccCcEEEEecccCCCCcceeEEEcChHHHHHHhhhcc
Confidence 9999999999998842 1 11 10000 00001111123444443 2333 3444 556 57888776432
Q ss_pred Cccc-cCCCCCcHHHH-HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCch
Q 011856 340 PMYQ-AGTLSGNPLAM-TAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFE 417 (476)
Q Consensus 340 ~~~~-~~t~~~~~~~~-aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~ 417 (476)
...+ +.|+++.+..+ +|...+|+...++++.+...++.++|.+.|++. +++...+..|.++.+++..- .
T Consensus 286 ~~~~g~~t~~g~~~~~~~Ala~~l~e~~~~~~~~~~~~~~~~l~~~L~~~----G~~~~~p~Gg~~v~~d~~~~-----~ 356 (460)
T PRK13238 286 ILYEGFPTYGGLAGRDMEALAVGLYEGMDEDYLAYRIGQVEYLGEGLEEA----GVPIQTPAGGHAVFVDAGKF-----L 356 (460)
T ss_pred cccCCcccccCcHHHHHHHHHhhHHHhhChHHHHHHHHHHHHHHHHHHHC----CCCeEccCCceEEEEEchhc-----C
Confidence 2222 34788866664 444445654434566666666678888888774 44433445566666655321 0
Q ss_pred hhcccchHHHHHHHHHHH-HCCeEeccCC-----------------CcceEEeCCC---cHHHHHHHHHHHHHHHH
Q 011856 418 DAKKSETTKFARFYRGML-EEGVYFAPSQ-----------------FEAGFTSLAH---SSDDIQHTITAAEKVKM 472 (476)
Q Consensus 418 ~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~-----------------~~~~~~~~~~---t~e~i~~~~~~l~~~~~ 472 (476)
...........+++..|+ +.||.+.|.+ ...+|+.+.- |++++|.+.++|+++.+
T Consensus 357 ~~~~~~~~~~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~~~~~~~~~Rla~~rr~~~~~~~~~~~~~l~~~~~ 432 (460)
T PRK13238 357 PHIPAEQFPAQALACELYLEAGIRGVEIGSLLLGRDPKTGEQLPAPAELLRLAIPRRVYTQSHMDYVAEALKAVKE 432 (460)
T ss_pred CCCCCCCCchHHHHHHHHHHcCeeeecccceecccCCCCccccCCccceEEEecccccCCHHHHHHHHHHHHHHHH
Confidence 000001111245665555 6799887753 1345776555 99999999999998764
No 223
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.87 E-value=9.4e-21 Score=191.97 Aligned_cols=343 Identities=13% Similarity=0.100 Sum_probs=185.2
Q ss_pred cCCCCcHHHHHHHHHHHHhcCCCCCC---CHHHHHHHH-HHHhhCC----CCC--eEEEeCCHHHHHHHHHHHHH---hc
Q 011856 112 IIGHADDQVLAALGETMKKGTSFGAP---CLLENVLAE-MVISAVP----SIE--MVRFVNSGTEACMGVLRLAR---AF 178 (476)
Q Consensus 112 ~lG~~~p~v~~a~~~~l~~~~~~~~~---~~~~~~la~-~l~~~~~----~~e--~v~~~~sGseA~~~al~~ar---~~ 178 (476)
..+..+|++++++.+.+. +..|..+ .++.+++++ .+.+.+. ..+ +|++++|+++|+..++.... ..
T Consensus 103 ~p~~~~~~~~~~~~~~~~-~~~Y~~p~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat~al~~~~~~l~~~~ll 181 (521)
T TIGR03801 103 QLGFDPDAFLYEMCDGII-GDNYPVPDRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGTAAMCYIFDSLKANELL 181 (521)
T ss_pred CCCCCCCHHHHHHHHHhh-cCCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHHhHhhcC
Confidence 445566677777777653 3233222 244445553 4444321 233 89999999999999887421 23
Q ss_pred cCCceEEEEeCCCCCCchhHHhhc--CCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccC
Q 011856 179 TGRERIIKFEGCYHGHADPFLVKA--GSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVV 256 (476)
Q Consensus 179 ~~~~~ii~~~~~yhg~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~ 256 (476)
.++++|++.+++|..+... .... +..+..++.....+ .....+.+ |.++++++++. ++++|+++..+
T Consensus 182 ~pGD~Vlv~~P~y~~y~~~-~~l~~~g~~vv~i~~~~~~~------~g~~~~~~-d~~~l~~~~~~---~~kai~l~nP~ 250 (521)
T TIGR03801 182 KKGDKIALMTPIFTPYLEI-PELPRYDFEVVRIKADEMTE------DGTHTWQY-PDKELEKLRDP---SIKALFVVNPS 250 (521)
T ss_pred CCCCEEEEeCCCcHHHHHH-HHHhcCCcEEEEeecccccc------cccccCCC-CHHHHHHhcCC---CCcEEEEeCCC
Confidence 4678899999998774433 2233 22222211110000 00000111 67888877642 56666544445
Q ss_pred CCCCcccCCHHHHHHHHHHHHHh--CCEEEEeccccCccccccchhhccCCCCc----hhhhhhhcC-CCCcEEEEEecH
Q 011856 257 GNSGFIAPKPDFLNAIRRITKEN--GALLIFDEVMTGFRLAYGGAQEYFGVTPD----LTTLGKIIG-GGLPVGAYGGRR 329 (476)
Q Consensus 257 ~~~G~i~~~~~~l~~l~~l~~~~--g~llI~DEv~~g~r~g~~~~~~~~g~~pD----i~t~sK~lg-~G~~iG~~~~~~ 329 (476)
|++|.+.+.++ +++|.++|++| |++||+||+|..|...... .....|+ +.+|||.++ +|||+||+++++
T Consensus 251 NPTG~vls~e~-l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~s---l~~~~~~~vI~v~SfSK~fg~~G~RlG~i~~~~ 326 (521)
T TIGR03801 251 NPPSVAMSDES-IEKIVDIVANDRPDLMILTDDVYGTFVDDFRS---LFAELPYNTIGVYSFSKYFGATGWRLGTIALHK 326 (521)
T ss_pred CCCCCCCCHHH-HHHHHHHHHhcCCCeEEEECCCchhhcccccc---hhhhCCCCEEEEEcchhhccCchhhhhhhhcCc
Confidence 66777776555 99999999987 9999999999877211111 1112233 237999998 899999999876
Q ss_pred H-----HH--------HhhcC---------------------CCCccccCCCCCcHHHHH--HHHHHHHHhcC-CCHHHH
Q 011856 330 D-----IM--------EMVAP---------------------AGPMYQAGTLSGNPLAMT--AGIHTLKRLKE-PGTYEY 372 (476)
Q Consensus 330 ~-----i~--------~~l~~---------------------~~~~~~~~t~~~~~~~~a--aa~aal~~~~~-~~~~~~ 372 (476)
+ ++ +.+.+ ........|.+.+.+.+. +..++...++. +.+.+.
T Consensus 327 ~~v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~~~g~s~p~Q~q~al~a~~all~~~~~y~~~ 406 (521)
T TIGR03801 327 DNIFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALMDKENAYKAE 406 (521)
T ss_pred hHHHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHhccchhHHHH
Confidence 4 22 11110 001112234455555544 21122222222 233332
Q ss_pred HHHHHHHHHHHHHHHhhhcCCce--EeeeeceeEEEEEecCCC----cCchhhcccchHHHHHHHHHHH-HCCeEeccCC
Q 011856 373 LNKITGELTQGIIDAGKKAGHAI--CGGYISGMFGFFFTEGPV----YNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ 445 (476)
Q Consensus 373 ~~~~~~~l~~~L~~~~~~~~~~~--~v~~~g~~~~i~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~ 445 (476)
.+ +.++++...+....++.. ..+..|.++++++..... ..|........ ...+++..|+ +.||.+.|+.
T Consensus 407 ~~---~~~~~R~~~l~~~Lg~~~~~~~~~g~~Y~~~di~~~~~~~~~~~f~~~l~~~~-~~~~~~~~L~~e~gV~v~PG~ 482 (521)
T TIGR03801 407 TK---DICRRREKLLFRGLGLPLQEDPNDVAYYTLIDLEEWAEKNYGEEFSSYLKKNY-SPVDVLFRLAEETGIVLLPGG 482 (521)
T ss_pred HH---HHHHHHHHHHHHhcCCCCcCCCCCeEEEEEeehHHHHHHhcchHHHHHHhccC-CHHHHHHHHHHhCCEEEeCch
Confidence 22 333333322222223221 123455666776642100 01111100000 1245666666 5699999873
Q ss_pred -----CcceEEeCC-CcHHHHHHHHHHHHHHHHHh
Q 011856 446 -----FEAGFTSLA-HSSDDIQHTITAAEKVKMRF 474 (476)
Q Consensus 446 -----~~~~~~~~~-~t~e~i~~~~~~l~~~~~~~ 474 (476)
.+.+|++++ .+++++.++.++|.+++++.
T Consensus 483 ~Fg~~~~~vRisla~l~~~~~~~~~~rl~~~~~~~ 517 (521)
T TIGR03801 483 GFGGPEWSVRVSLANLNEYDYAEIGRAIRKILDEY 517 (521)
T ss_pred hcCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHH
Confidence 235889887 69999999999999998764
No 224
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.86 E-value=2.1e-19 Score=178.14 Aligned_cols=312 Identities=16% Similarity=0.157 Sum_probs=195.9
Q ss_pred CcHHHHHHHHHHHHhcCCCCCC--CHHHHHHHHHHHhhCCC-C-CeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCC
Q 011856 116 ADDQVLAALGETMKKGTSFGAP--CLLENVLAEMVISAVPS-I-EMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCY 191 (476)
Q Consensus 116 ~~p~v~~a~~~~l~~~~~~~~~--~~~~~~la~~l~~~~~~-~-e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~y 191 (476)
.++.+.+++.+.+. .+.++ .+...++.+.++++++. . +.+++++||++|+..+++.. ...++.|++.+.++
T Consensus 10 ~~~~v~~a~~~~~~---~~~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~~~~t~al~~~~~~~--~~~g~~vl~~~~~~ 84 (356)
T cd06451 10 VPPRVLKAMNRPML---GHRSPEFLALMDEILEGLRYVFQTENGLTFLLSGSGTGAMEAALSNL--LEPGDKVLVGVNGV 84 (356)
T ss_pred CCHHHHHHhCCCcc---CCCCHHHHHHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHHHHHHh--CCCCCEEEEecCCc
Confidence 36777777754332 12222 34466888889988862 3 45789999999999999842 34567777777666
Q ss_pred CCC-chhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHH
Q 011856 192 HGH-ADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLN 270 (476)
Q Consensus 192 hg~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~ 270 (476)
++. ....+...|..+...+.... ...|++++++.++++ ++++|++..+++++|.+.+ ++
T Consensus 85 ~~~~~~~~~~~~g~~~~~v~~~~~--------------~~~~~~~l~~~i~~~--~~~~v~i~~~~~~~G~~~~----~~ 144 (356)
T cd06451 85 FGDRWADMAERYGADVDVVEKPWG--------------EAVSPEEIAEALEQH--DIKAVTLTHNETSTGVLNP----LE 144 (356)
T ss_pred hhHHHHHHHHHhCCCeEEeecCCC--------------CCCCHHHHHHHHhcc--CCCEEEEeccCCCcccccC----HH
Confidence 653 22233334443322111100 012799999999742 5667777666777899888 99
Q ss_pred HHHHHHHHhCCEEEEeccccCccccccchhhccCCCCchh--hhhhhcCCCCcEEEEEecHHHHHhhcC--CC-Ccc---
Q 011856 271 AIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLT--TLGKIIGGGLPVGAYGGRRDIMEMVAP--AG-PMY--- 342 (476)
Q Consensus 271 ~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pDi~--t~sK~lg~G~~iG~~~~~~~i~~~l~~--~~-~~~--- 342 (476)
+|.++|+++|+++|+|++|. +.. .......++ +|++ +++|.++++.++|+++.++++++.+.. .. ..+
T Consensus 145 ~i~~~a~~~~~~li~D~~~~-~g~-~~~~~~~~~--~d~~~~s~~K~l~~p~g~G~l~~~~~~~~~~~~~~~~~~~~~~~ 220 (356)
T cd06451 145 GIGALAKKHDALLIVDAVSS-LGG-EPFRMDEWG--VDVAYTGSQKALGAPPGLGPIAFSERALERIKKKTKPKGFYFDL 220 (356)
T ss_pred HHHHHHHhcCCEEEEeeehh-ccC-ccccccccC--ccEEEecCchhccCCCCcceeEECHHHHHHHHhcCCCCceeecH
Confidence 99999999999999999984 200 011111223 4655 467999976678999999998877652 10 000
Q ss_pred -------c---cCCCCCcHHHHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHHHHHHhhhcCCceEeee-eceeEEEEE
Q 011856 343 -------Q---AGTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAGHAICGGY-ISGMFGFFF 408 (476)
Q Consensus 343 -------~---~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~-~g~~~~i~~ 408 (476)
. +...+.++..+.++.++++.+.. +.+.++.+++.+++++.|++..... ...... .+.+.++.+
T Consensus 221 ~~~~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~--~~~~~~~~~~~~~~~~ 298 (356)
T cd06451 221 LLLLKYWGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEALGLKL--LAKPELRSPTVTAVLV 298 (356)
T ss_pred HHHHhhhcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCee--ccCcccCCCceEEEEC
Confidence 0 11223456666777788877654 4566777788888888887653211 111111 122223332
Q ss_pred ecCCCcCchhhcccchHHHHHHHHHHHHC-CeEeccCC----CcceEEe--CCCcHHHHHHHHHHHHHHH
Q 011856 409 TEGPVYNFEDAKKSETTKFARFYRGMLEE-GVYFAPSQ----FEAGFTS--LAHSSDDIQHTITAAEKVK 471 (476)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~~----~~~~~~~--~~~t~e~i~~~~~~l~~~~ 471 (476)
.. .....++.+.|.++ ||.+.++. ...+|++ ..+|++|+++++++|++++
T Consensus 299 ~~-------------~~~~~~~~~~L~~~~gI~~~~g~~~~~~~~iRis~~~~~~~e~v~~~~~~l~~~~ 355 (356)
T cd06451 299 PE-------------GVDGDEVVRRLMKRYNIEIAGGLGPTAGKVFRIGHMGEATREDVLGVLSALEEAL 355 (356)
T ss_pred CC-------------CCCHHHHHHHHHHhCCEEEecccccccCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 11 11235788999998 99998753 2356775 4589999999999999876
No 225
>PLN02368 alanine transaminase
Probab=99.85 E-value=3.8e-20 Score=184.73 Aligned_cols=230 Identities=17% Similarity=0.134 Sum_probs=150.6
Q ss_pred CHHHHHHHHHHHhhCC---CCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCC
Q 011856 138 CLLENVLAEMVISAVP---SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDS 214 (476)
Q Consensus 138 ~~~~~~la~~l~~~~~---~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~ 214 (476)
.++++++++++.+..+ .+++|++|+|+++++..+++.. ....++.|++.+++|..+... +...|..+..+++...
T Consensus 110 ~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l-~~~pGd~Vli~~P~Y~~y~~~-~~~~g~~~v~v~~~~~ 187 (407)
T PLN02368 110 PGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAV-IRGEKDGVLVPVPQYPLYSAT-ISLLGGTLVPYYLEES 187 (407)
T ss_pred HHHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHH-cCCCCCEEEEeCCCCccHHHH-HHHcCCEEEEEecccc
Confidence 4677888888876543 5789999999999999998842 113567899999999886443 3444443333222111
Q ss_pred CCCCCCCCCceeeccCCCHHHHHHHHhcC---CCCeEE-EEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc
Q 011856 215 PGVPKGATYETLTAPFNDVSALENLFENN---KGEIAA-IILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT 290 (476)
Q Consensus 215 ~~~~~~~~~~~~~~~~~d~~~le~~l~~~---~~~~a~-vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~ 290 (476)
.++ .-|+++|++.+++. ..++++ ++++| +|++|.+.+.++ +++|.++|++||++||+||+|.
T Consensus 188 ~~~------------~~d~~~le~~i~~~~~~~~~~k~l~l~nP-~NPTG~v~s~e~-l~~l~~~a~~~~~~II~DE~Y~ 253 (407)
T PLN02368 188 ENW------------GLDVNNLRQSVAQARSKGITVRAMVIINP-GNPTGQCLSEAN-LREILKFCYQERLVLLGDEVYQ 253 (407)
T ss_pred cCC------------CCCHHHHHHHHHHHhhcCCCeEEEEEECC-CCCCCccCCHHH-HHHHHHHHHHcCCEEEEEcccc
Confidence 110 01789999988631 114564 45556 667788776555 9999999999999999999998
Q ss_pred Cc-cccc-cc-h-hhcc-CC------CCchh---hhhhhc-C-CCCcEEEEE---ecHHHHHhhcCCCCccccCCCCCcH
Q 011856 291 GF-RLAY-GG-A-QEYF-GV------TPDLT---TLGKII-G-GGLPVGAYG---GRRDIMEMVAPAGPMYQAGTLSGNP 351 (476)
Q Consensus 291 g~-r~g~-~~-~-~~~~-g~------~pDi~---t~sK~l-g-~G~~iG~~~---~~~~i~~~l~~~~~~~~~~t~~~~~ 351 (476)
.+ ..+. .+ . .+.. ++ .+.++ +|||++ + +|||+||++ +++++++.+... ...+++.|.
T Consensus 254 ~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~li~~~~~~----~~~~~~~~~ 329 (407)
T PLN02368 254 QNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVEEIYKV----ASIALSPNV 329 (407)
T ss_pred ccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCHHHHHHHHHH----hcccCCCCc
Confidence 87 4442 11 1 1111 11 12333 789998 5 899999998 488898887632 123567788
Q ss_pred HHHHHHHHHHHHhc-----------C-CCHHHHHHHHHHHHHHHHHHH
Q 011856 352 LAMTAGIHTLKRLK-----------E-PGTYEYLNKITGELTQGIIDA 387 (476)
Q Consensus 352 ~~~aaa~aal~~~~-----------~-~~~~~~~~~~~~~l~~~L~~~ 387 (476)
+++.++.++|+.-+ + .++.+.++++.+.+.+.|+++
T Consensus 330 ~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~ 377 (407)
T PLN02368 330 SGQIFMGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSC 377 (407)
T ss_pred HHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999988885211 0 123455556666666666553
No 226
>PRK02948 cysteine desulfurase; Provisional
Probab=99.85 E-value=5.6e-19 Score=176.61 Aligned_cols=315 Identities=16% Similarity=0.120 Sum_probs=196.1
Q ss_pred CCCcHHHHHHHHHHHHhc-CCCC-CC------CHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHHHh-ccCCce
Q 011856 114 GHADDQVLAALGETMKKG-TSFG-AP------CLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARA-FTGRER 183 (476)
Q Consensus 114 G~~~p~v~~a~~~~l~~~-~~~~-~~------~~~~~~la~~l~~~~~-~~e~v~~~~sGseA~~~al~~ar~-~~~~~~ 183 (476)
|..++.+.+++.+.++.. ...+ .+ ....+++.+.++++++ ..++|+|++|+++++..+++.... +.++++
T Consensus 10 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~~~~~~~~g~ 89 (381)
T PRK02948 10 TPMSKEALQTYQKAASQYFGNESSLHDIGGTASSLLQVCRKTFAEMIGGEEQGIYFTSGGTESNYLAIQSLLNALPQNKK 89 (381)
T ss_pred CCCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHHhccCCCC
Confidence 456899999998888652 1111 11 2445677888888886 578999999999999999875432 223334
Q ss_pred EEEEeCCCCCCchhHH---hhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCC
Q 011856 184 IIKFEGCYHGHADPFL---VKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSG 260 (476)
Q Consensus 184 ii~~~~~yhg~~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G 260 (476)
.|+.....|....... ...|..+...+... .+ ..|+++|++.+++ ++++|+++.+++++|
T Consensus 90 ~vv~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~-~~-------------~~d~~~l~~~l~~---~~~lv~~~~~~n~tG 152 (381)
T PRK02948 90 HIITTPMEHASIHSYFQSLESQGYTVTEIPVDK-SG-------------LIRLVDLERAITP---DTVLASIQHANSEIG 152 (381)
T ss_pred EEEECCcccHHHHHHHHHHHhCCCEEEEEeeCC-CC-------------CCCHHHHHHhcCC---CCEEEEEECCcCCcE
Confidence 4555555555433322 22233222211110 01 1278999988863 567888888888999
Q ss_pred cccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccchhhccCCCCchh--hhhhhcC-CCCcEEEEEecHHH-HHhh
Q 011856 261 FIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLT--TLGKIIG-GGLPVGAYGGRRDI-MEMV 335 (476)
Q Consensus 261 ~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pDi~--t~sK~lg-~G~~iG~~~~~~~i-~~~l 335 (476)
.+.| +++|.++|+++|+++|+|++|. | .. ......++ .|++ +++|.+| .| +|+++.++++ +..+
T Consensus 153 ~~~~----~~~I~~l~~~~~~~vivD~~~~-~g~~--~~~~~~~~--~d~~~~s~~K~~gp~G--~G~l~~~~~~~~~~~ 221 (381)
T PRK02948 153 TIQP----IAEIGALLKKYNVLFHSDCVQT-FGKL--PIDVFEMG--IDSLSVSAHKIYGPKG--VGAVYINPQVRWKPV 221 (381)
T ss_pred eehh----HHHHHHHHHHcCCEEEEEChhh-cccc--ccCcccCC--CCEEEecHHhcCCCCc--EEEEEEcCCCCCCCc
Confidence 9998 9999999999999999998884 3 11 11112223 4655 7889887 34 8888888765 1111
Q ss_pred cCCC-CccccCCCCCcHHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHhhhcCCceEeee-----eceeEEEE
Q 011856 336 APAG-PMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGY-----ISGMFGFF 407 (476)
Q Consensus 336 ~~~~-~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~-----~g~~~~i~ 407 (476)
.... ....+..++.|.++++++.++++.+.+ ++..++++++.+++++.|+++..+ ....+ ...++.+.
T Consensus 222 ~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~----v~~~~~~~~~~~~i~~~~ 297 (381)
T PRK02948 222 FPGTTHEKGFRPGTVNVPGIAAFLTAAENILKNMQEESLRFKELRSYFLEQIQTLPLP----IEVEGHSTSCLPHIIGVT 297 (381)
T ss_pred ccCCCCCCCcCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC----EEEeCCCccCcCCEEEEE
Confidence 1000 000112345688888888899886533 556677777888888777765211 11111 11122222
Q ss_pred EecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCC-----------------------CcceEEe--CCCcHHHHHH
Q 011856 408 FTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ-----------------------FEAGFTS--LAHSSDDIQH 462 (476)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~-----------------------~~~~~~~--~~~t~e~i~~ 462 (476)
+.. ....++...|.++||.++.+. ...+|++ ..+|++|+|+
T Consensus 298 ~~~--------------~~~~~~~~~l~~~gI~v~~g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~ 363 (381)
T PRK02948 298 IKG--------------IEGQYTMLECNRRGIAISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDT 363 (381)
T ss_pred eCC--------------CCHHHHHHhcccCCEEEEchHhcCCCCCCCCHHHHHcCCChHHhCceEEEEcCCCCCHHHHHH
Confidence 211 012456667788999998542 1346775 4579999999
Q ss_pred HHHHHHHHHHHh
Q 011856 463 TITAAEKVKMRF 474 (476)
Q Consensus 463 ~~~~l~~~~~~~ 474 (476)
+++.|+++++.+
T Consensus 364 l~~~l~~~~~~~ 375 (381)
T PRK02948 364 TIHALETIGNQF 375 (381)
T ss_pred HHHHHHHHHHHH
Confidence 999999988764
No 227
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.85 E-value=6.2e-19 Score=176.18 Aligned_cols=314 Identities=18% Similarity=0.140 Sum_probs=190.3
Q ss_pred CCCcHHHHHHHHHHHHhcCCC--CCC------CHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHHHhc-cCCce
Q 011856 114 GHADDQVLAALGETMKKGTSF--GAP------CLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAF-TGRER 183 (476)
Q Consensus 114 G~~~p~v~~a~~~~l~~~~~~--~~~------~~~~~~la~~l~~~~~-~~e~v~~~~sGseA~~~al~~ar~~-~~~~~ 183 (476)
+..++.|.+++.+.+.....+ ... .+...++.+.++++++ ..++++|++||++++..+++..... .+++.
T Consensus 9 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~i~~t~~~t~a~~~al~~~~~~~~~~~~ 88 (379)
T TIGR03402 9 TRVDPEVLEAMLPYFTEYFGNPSSMHSFGGEVGKAVEEAREQVAKLLGAEPDEIIFTSGGTESDNTAIKSALAAQPEKRH 88 (379)
T ss_pred CCCCHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHHhcCCCCe
Confidence 345789999999887642111 111 2334577788888886 5678999999999999999865322 34455
Q ss_pred EEEEeCCCCCCchhHH--hhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCc
Q 011856 184 IIKFEGCYHGHADPFL--VKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGF 261 (476)
Q Consensus 184 ii~~~~~yhg~~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~ 261 (476)
|++....|++...... ...|..+...+... .+ .-|++++++.+++ ++++|+++.+++++|.
T Consensus 89 vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~-~g-------------~~~~~~l~~~i~~---~~~lv~i~~~~n~tG~ 151 (379)
T TIGR03402 89 IITTAVEHPAVLSLCQHLEKQGYKVTYLPVDE-EG-------------RLDLEELRAAITD---DTALVSVMWANNETGT 151 (379)
T ss_pred EEEcccccHHHHHHHHHHHHcCCEEEEEccCC-CC-------------cCCHHHHHHhcCC---CcEEEEEEcccCCeee
Confidence 5555555544322211 11233222211110 11 0278999998864 5778888888888999
Q ss_pred ccCCHHHHHHHHHHHHHhCCEEEEeccccCccccccchhhccCCCCchhhhh--hhcCCCCcEEEEEecHHHHHhhcCCC
Q 011856 262 IAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLG--KIIGGGLPVGAYGGRRDIMEMVAPAG 339 (476)
Q Consensus 262 i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pDi~t~s--K~lg~G~~iG~~~~~~~i~~~l~~~~ 339 (476)
+.| +++|.++|++||+++|+|++|+ + |. ...+......|++++| | +.+...+|++..+++.. +.+..
T Consensus 152 ~~~----~~~I~~l~~~~g~~vivD~~~~-~--g~-~~~~~~~~~~D~~~~s~~K-~~gp~G~g~l~v~~~~~--~~p~~ 220 (379)
T TIGR03402 152 IFP----IEEIGEIAKERGALFHTDAVQA-V--GK-IPIDLKEMNIDMLSLSGHK-LHGPKGVGALYIRKGTR--FRPLL 220 (379)
T ss_pred ccc----HHHHHHHHHHcCCEEEEECccc-c--cc-cccCcccCCCCEEEEcHHH-cCCCCceEEEEECCCCC--CCCcc
Confidence 999 8999999999999999999995 1 11 1112223456888777 9 54333488887776541 22110
Q ss_pred ------CccccCCCCCcHHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHhhhcCCc-eEee---eeceeEEEE
Q 011856 340 ------PMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHA-ICGG---YISGMFGFF 407 (476)
Q Consensus 340 ------~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~v~---~~g~~~~i~ 407 (476)
..... .+.|..+..+..++++.+.+ ++..++.+++.+++++.|.+. .+.. .... .....+.+.
T Consensus 221 ~g~~~~~~~~~--gt~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~---~~~~~~~~~~~~~~~~~~~~~ 295 (379)
T TIGR03402 221 RGGHQERGRRA--GTENVPGIVGLGKAAELATEHLEEENTRVRALRDRLEAGLLAR---IPDARLNGDPTKRLPNTVNIS 295 (379)
T ss_pred cCCccCCCcCC--CCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhh---CCCEEEeCCCccCCCCEEEEE
Confidence 00112 23456666677777877654 334455666666666666541 2211 1000 111223333
Q ss_pred EecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCC-----------------------CcceEEe--CCCcHHHHHH
Q 011856 408 FTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ-----------------------FEAGFTS--LAHSSDDIQH 462 (476)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~-----------------------~~~~~~~--~~~t~e~i~~ 462 (476)
+.. ++ ..++...|.++||.++.+. ...+|++ ..+|++|||+
T Consensus 296 ~~~-----------~~---~~~~~~~l~~~gI~v~~g~~c~~~~~~~~~~~~~lg~~~~~~~~~vR~S~~~~~t~~di~~ 361 (379)
T TIGR03402 296 FEY-----------IE---GEAILLLLDMEGICASSGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDY 361 (379)
T ss_pred ecC-----------CC---HHHHHHhhccCCEEEEchhhcCCCCCCcCHHHHHcCCChhhcCceEEEEcCCCCCHHHHHH
Confidence 321 11 2467778888999987642 1346775 5579999999
Q ss_pred HHHHHHHHHHHh
Q 011856 463 TITAAEKVKMRF 474 (476)
Q Consensus 463 ~~~~l~~~~~~~ 474 (476)
+++.|+++++++
T Consensus 362 ~~~~l~~~~~~~ 373 (379)
T TIGR03402 362 VLEVLPPIIARL 373 (379)
T ss_pred HHHHHHHHHHHH
Confidence 999999988653
No 228
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.85 E-value=3.6e-18 Score=171.80 Aligned_cols=319 Identities=14% Similarity=0.142 Sum_probs=192.8
Q ss_pred CEEEecccChhhccCCCCcHHHHHHHHHHHHhcC-CC--CCC-----CHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHH
Q 011856 99 NEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT-SF--GAP-----CLLENVLAEMVISAVP-SIEMVRFVNSGTEACM 169 (476)
Q Consensus 99 ~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~-~~--~~~-----~~~~~~la~~l~~~~~-~~e~v~~~~sGseA~~ 169 (476)
..|+|..+. |..++.+.+++.+.+.... .. .++ .+...++.+.++++++ ..+.+++++|+++++.
T Consensus 18 ~~yl~~~~~------~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~~~~~~v~~~~~~t~~l~ 91 (397)
T TIGR01976 18 RVFFDNPAG------TQIPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLNADPPEVVFGANATSLTF 91 (397)
T ss_pred eEEecCCcc------CCCCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcCCCCCeEEEeCCHHHHHH
Confidence 367775443 4468999999999886521 11 122 2345688888988886 3457999999999988
Q ss_pred HHHHHHHh-ccCCceEEEEeCCCCCCchhH---HhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCC
Q 011856 170 GVLRLARA-FTGRERIIKFEGCYHGHADPF---LVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKG 245 (476)
Q Consensus 170 ~al~~ar~-~~~~~~ii~~~~~yhg~~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~ 245 (476)
.++..... ..++++|++.+..|++..... ....|..+...+.....+ ..|++++++.+++
T Consensus 92 ~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~-------------~~~~~~l~~~i~~--- 155 (397)
T TIGR01976 92 LLSRAISRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDEATG-------------ELHPDDLASLLSP--- 155 (397)
T ss_pred HHHHHHHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEeccccCC-------------CcCHHHHHHhcCC---
Confidence 77764322 344567777776665543322 222343332211111001 0178999988863
Q ss_pred CeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCccccccchhhccCCCCchh--hhhhhcCCCCcEE
Q 011856 246 EIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLT--TLGKIIGGGLPVG 323 (476)
Q Consensus 246 ~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pDi~--t~sK~lg~G~~iG 323 (476)
++++|+++.+++++|.+.+ +++|.++|++||+++|+||+|.. ... ..... ...+|++ +++|.+| .|+|
T Consensus 156 ~~~lv~i~~~~n~tG~~~~----~~~i~~~~~~~~~~~ivD~a~~~-~~~-~~~~~--~~~~d~~~~s~~K~~g--~~~G 225 (397)
T TIGR01976 156 RTRLVAVTAASNTLGSIVD----LAAITELVHAAGALVVVDAVHYA-PHG-LIDVQ--ATGADFLTCSAYKFFG--PHMG 225 (397)
T ss_pred CceEEEEeCCCCCCCccCC----HHHHHHHHHHcCCEEEEehhhhc-ccc-CCCHH--HcCCCEEEEechhhcC--CceE
Confidence 5788888888888999988 99999999999999999999941 111 11111 2245765 6789884 5799
Q ss_pred EEEecHHHHHhhcCCCCccccC-------CCCCcHHHHHHHHHHHHHhcCCC-----------------HHHHHHHHHHH
Q 011856 324 AYGGRRDIMEMVAPAGPMYQAG-------TLSGNPLAMTAGIHTLKRLKEPG-----------------TYEYLNKITGE 379 (476)
Q Consensus 324 ~~~~~~~i~~~l~~~~~~~~~~-------t~~~~~~~~aaa~aal~~~~~~~-----------------~~~~~~~~~~~ 379 (476)
++++++++++.+.+....+... .-+.+....++..++++.+.+.+ ..++..++.++
T Consensus 226 ~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 305 (397)
T TIGR01976 226 ILWGRPELLMNLPPYKLTFSYDTGPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEY 305 (397)
T ss_pred EEEEcHHHHhhCCCccccCccCCCcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHH
Confidence 9999999988776421111111 11234455555566666654311 12333344445
Q ss_pred HHHHHHHHhhhcC-CceE----eeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCC---------
Q 011856 380 LTQGIIDAGKKAG-HAIC----GGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ--------- 445 (476)
Q Consensus 380 l~~~L~~~~~~~~-~~~~----v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~--------- 445 (476)
+++.|+++ + +... ....+.++.+.+.. ....++.+.|.++||+++.+.
T Consensus 306 l~~~L~~~----~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~ 367 (397)
T TIGR01976 306 LLVGLSDL----PGVTLYGVARLAARVPTVSFTVHG--------------LPPQRVVRRLADQGIDAWAGHFYAVRLLRR 367 (397)
T ss_pred HHHHHhcC----CCEEEeCCCCccCCCceEEEEeCC--------------cCHHHHHHHHHHCCeEEEeCccchHHHHHH
Confidence 55544432 2 1110 01134455444421 112468888999999998641
Q ss_pred ------CcceEEe--CCCcHHHHHHHHHHH
Q 011856 446 ------FEAGFTS--LAHSSDDIQHTITAA 467 (476)
Q Consensus 446 ------~~~~~~~--~~~t~e~i~~~~~~l 467 (476)
...+|++ ..+|++|+++++++|
T Consensus 368 ~~~~~~~~~iRis~~~~~t~~di~~l~~~l 397 (397)
T TIGR01976 368 LGLNDEGGVVRVGLAHYNTAEEVDRLLEAL 397 (397)
T ss_pred hCCCCCCCeEEEEeeccCCHHHHHHHHHhC
Confidence 1246664 578999999999864
No 229
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.85 E-value=3e-18 Score=170.93 Aligned_cols=314 Identities=15% Similarity=0.136 Sum_probs=194.2
Q ss_pred CCCCcHHHHHHHHHHHHhcCC---CCCC------CHHHHHHHHHHHhhCC-C-CCeEEEeCCHHHHHHHHHHHHHhc-cC
Q 011856 113 IGHADDQVLAALGETMKKGTS---FGAP------CLLENVLAEMVISAVP-S-IEMVRFVNSGTEACMGVLRLARAF-TG 180 (476)
Q Consensus 113 lG~~~p~v~~a~~~~l~~~~~---~~~~------~~~~~~la~~l~~~~~-~-~e~v~~~~sGseA~~~al~~ar~~-~~ 180 (476)
.|..++.+.+++.+.++.... .+.. .....++.+.++++++ . .+++++++|+++++..+++..... .+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~~~~ 87 (373)
T cd06453 8 TSQKPQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFINAPSPDEIIFTRNTTEAINLVAYGLGRANKP 87 (373)
T ss_pred ccCCCHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCCHHHHHHHHHHHhhhcCCC
Confidence 455689999999888765211 1111 2334567788888875 3 568999999999999999853211 14
Q ss_pred CceEEEEeCCCCCCchhHH---hhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCC
Q 011856 181 RERIIKFEGCYHGHADPFL---VKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVG 257 (476)
Q Consensus 181 ~~~ii~~~~~yhg~~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~ 257 (476)
+++|++.+..|.+...... ...|..+...+... .+ .-|++++++.+.+ ++++|++..+++
T Consensus 88 g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~-------------~~d~~~l~~~l~~---~~~~v~~~~~~~ 150 (373)
T cd06453 88 GDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVDD-DG-------------QLDLEALEKLLTE---RTKLVAVTHVSN 150 (373)
T ss_pred CCEEEECcchhHHHHHHHHHHHhhcCcEEEEeecCC-CC-------------CcCHHHHHHHhcC---CceEEEEeCccc
Confidence 5677777666655322211 12233222211110 00 0178999998864 577888877777
Q ss_pred CCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCccccccchhhccCCCCchhhhh--hhcCCCCcEEEEEecHHHHHhh
Q 011856 258 NSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLG--KIIGGGLPVGAYGGRRDIMEMV 335 (476)
Q Consensus 258 ~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pDi~t~s--K~lg~G~~iG~~~~~~~i~~~l 335 (476)
++|.+.+ +++|.++|++||++||+|++|+.... ........+|++++| |.+++ .++|++++++++++.+
T Consensus 151 ~tG~~~~----~~~i~~~~~~~~~~li~D~a~~~~~~----~~~~~~~~~d~~~~s~~K~~~~-~g~g~~~~~~~~~~~~ 221 (373)
T cd06453 151 VLGTINP----VKEIGEIAHEAGVPVLVDGAQSAGHM----PVDVQDLGCDFLAFSGHKMLGP-TGIGVLYGKEELLEEM 221 (373)
T ss_pred ccCCcCC----HHHHHHHHHHcCCEEEEEhhhhcCce----eeeccccCCCEEEeccccccCC-CCcEEEEEchHHhhcC
Confidence 8899988 89999999999999999999952111 111112346888777 99986 6689999999988877
Q ss_pred cCCCCc-c-----------------ccCCCCCcHHHHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHHHHHHhhhcCCc
Q 011856 336 APAGPM-Y-----------------QAGTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAGHA 394 (476)
Q Consensus 336 ~~~~~~-~-----------------~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 394 (476)
.+.... . .+...+.+..++.+..++++.+.+ ++..++.+++.+++++.|+++. ...+.
T Consensus 222 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~-~~~~~ 300 (373)
T cd06453 222 PPYGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIP-GVRVY 300 (373)
T ss_pred CCeecCCCccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCC-CeEEe
Confidence 632100 0 011113344555566667777665 3345555666666666665531 01111
Q ss_pred eEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCC------------CcceEEeC--CCcHHHH
Q 011856 395 ICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ------------FEAGFTSL--AHSSDDI 460 (476)
Q Consensus 395 ~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~------------~~~~~~~~--~~t~e~i 460 (476)
......+.++.+.+.+. ...++.+.|.++||.+.++. ...+|+++ .+|++|+
T Consensus 301 ~~~~~~~~~~~~~~~~~--------------~~~~i~~~l~~~gi~i~~g~~~~~~~~~~~~~~~~iRis~~~~~t~~di 366 (373)
T cd06453 301 GDAEDRAGVVSFNLEGI--------------HPHDVATILDQYGIAVRAGHHCAQPLMRRLGVPGTVRASFGLYNTEEEI 366 (373)
T ss_pred CCccccCCeEEEEECCc--------------CHHHHHHHHHHCCEEeccCccchhHHHHHhCCCCeEEEEecCCCCHHHH
Confidence 11122455666665321 12578888999999987543 23567754 4699999
Q ss_pred HHHHHHH
Q 011856 461 QHTITAA 467 (476)
Q Consensus 461 ~~~~~~l 467 (476)
|++++.|
T Consensus 367 ~~~~~~l 373 (373)
T cd06453 367 DALVEAL 373 (373)
T ss_pred HHHHhhC
Confidence 9999864
No 230
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.84 E-value=9.3e-19 Score=167.12 Aligned_cols=324 Identities=19% Similarity=0.179 Sum_probs=205.2
Q ss_pred EEEecccChhhccCCCCcHHHHHHHHHHHHhcCCCCCC----------CHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHH
Q 011856 100 EYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAP----------CLLENVLAEMVISAVP-SIEMVRFVNSGTEAC 168 (476)
Q Consensus 100 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~~~~----------~~~~~~la~~l~~~~~-~~e~v~~~~sGseA~ 168 (476)
.|+|..+. .+ -+|++++++...++.. |+.| ....++-++.+++.++ .+++|+||++|||++
T Consensus 3 iYlD~~AT---Tp---~~~~v~~~m~~~~~~~--fgNPsS~H~~G~~A~~~ve~AR~~iA~llga~~~eIiFTSG~TEsn 74 (386)
T COG1104 3 IYLDNAAT---TP---VDPEVLEAMLPYLTEV--FGNPSSLHSFGREARKAVEEAREQIAKLLGADPEEIIFTSGATESN 74 (386)
T ss_pred cccccccc---CC---CCHHHHHHHHHHHHhh--cCCccchhHhHHHHHHHHHHHHHHHHHHhCCCCCeEEEecCCcHHH
Confidence 47777665 22 3799999999998873 2222 2344566677777776 578999999999999
Q ss_pred HHHHHHH-Hhcc---CCceEEEEeCCCCCCchhHHhhc---CCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHh
Q 011856 169 MGVLRLA-RAFT---GRERIIKFEGCYHGHADPFLVKA---GSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFE 241 (476)
Q Consensus 169 ~~al~~a-r~~~---~~~~ii~~~~~yhg~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~ 241 (476)
..||+-+ .++. ++++||+ ...=|-.....+... |..+..++ ++..|.. |+++|+++|+
T Consensus 75 NlaI~g~~~a~~~~~~~~HIIt-s~iEH~aVl~~~~~Le~~g~~Vtyl~-V~~~G~v-------------~~e~L~~al~ 139 (386)
T COG1104 75 NLAIKGAALAYRNAQKGKHIIT-SAIEHPAVLNTCRYLERQGFEVTYLP-VDSNGLV-------------DLEQLEEALR 139 (386)
T ss_pred HHHHHhhHHhhhcccCCCeEEE-cccccHHHHHHHHHHHhcCCeEEEeC-CCCCCeE-------------cHHHHHHhcC
Confidence 9999953 2222 2445554 445555444333322 43333222 1122321 7999999998
Q ss_pred cCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCccccccchhhccCCCCchhhhh--hhcCCC
Q 011856 242 NNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLG--KIIGGG 319 (476)
Q Consensus 242 ~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pDi~t~s--K~lg~G 319 (476)
. ++.+|.+..+||+.|.+.| +++|.++|+++|+++++|-||. .|+ ...+......|+++|| |-.| .
T Consensus 140 ~---~T~LVSim~aNnE~G~IQp----I~ei~~i~k~~~i~fHvDAvQa---~Gk-ipi~~~~~~vD~ls~SaHK~~G-p 207 (386)
T COG1104 140 P---DTILVSIMHANNETGTIQP----IAEIGEICKERGILFHVDAVQA---VGK-IPIDLEELGVDLLSFSAHKFGG-P 207 (386)
T ss_pred C---CceEEEEEecccCeeeccc----HHHHHHHHHHcCCeEEEehhhh---cCc-eeccccccCcceEEeehhhccC-C
Confidence 4 7999999999999999999 9999999999999999999995 222 1122222236899887 5444 2
Q ss_pred CcEEEEEecHHHH-HhhcCC---CCccccCCCCCcHHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHhhhcCC
Q 011856 320 LPVGAYGGRRDIM-EMVAPA---GPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGH 393 (476)
Q Consensus 320 ~~iG~~~~~~~i~-~~l~~~---~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~ 393 (476)
-.+|++..++.+. +.+... .+....+|- |..+.++.-++++...+ +....++.+++++|.+.|.+......+
T Consensus 208 kGiGaLyv~~~~~~~p~i~GGgQE~g~RsGTe--nv~~Ivg~~~A~~~a~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~ 285 (386)
T COG1104 208 KGIGALYVRPGVRLEPLIHGGGQERGLRSGTE--NVPGIVGFGKAAEIAVEELEEENARLRKLRDRLEDGLLEIIPDVYL 285 (386)
T ss_pred CceEEEEECCCCccCceeccCcCCCCCCCCCc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEE
Confidence 2499998766542 212111 112233343 45555555556665433 567778888888888888875322211
Q ss_pred ceE-eeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCC-----------------------cce
Q 011856 394 AIC-GGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-----------------------EAG 449 (476)
Q Consensus 394 ~~~-v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~-----------------------~~~ 449 (476)
... .......+.+.|..- ..+.+...|-.+||.+..+.. ..+
T Consensus 286 ~g~~~~rlP~~~~~~f~gv--------------~gE~ll~~L~~~gI~vStGSACsS~~~~pShVL~AmG~~~e~a~~si 351 (386)
T COG1104 286 NGDDEPRLPNILNFSFPGV--------------EGESLLLALDLAGIAVSTGSACSSGSLEPSHVLRAMGISEELAHGSI 351 (386)
T ss_pred cCCcccCCCCeEEEEeCCC--------------cHHHHHHhccccCeEEeccccccCCCCCccHHHHHcCCChHHhCccE
Confidence 111 122334444554321 124555666677999876531 124
Q ss_pred EEe--CCCcHHHHHHHHHHHHHHHHHh
Q 011856 450 FTS--LAHSSDDIQHTITAAEKVKMRF 474 (476)
Q Consensus 450 ~~~--~~~t~e~i~~~~~~l~~~~~~~ 474 (476)
|++ -..|++|+|.+++.|+++++.+
T Consensus 352 R~S~g~~tt~eei~~~~~~l~~~i~~l 378 (386)
T COG1104 352 RFSLGRFTTEEEIDAAAEALKEIIKRL 378 (386)
T ss_pred EEEcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 665 5669999999999999998764
No 231
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.84 E-value=2.8e-18 Score=172.97 Aligned_cols=325 Identities=18% Similarity=0.191 Sum_probs=201.6
Q ss_pred EEEecccChhhccCCCCcHHHHHHHHHHHHhc--CCC-CCC------CHHHHHHHHHHHhhCC-C-CCeEEEeCCHHHHH
Q 011856 100 EYIDYVGSWGPAIIGHADDQVLAALGETMKKG--TSF-GAP------CLLENVLAEMVISAVP-S-IEMVRFVNSGTEAC 168 (476)
Q Consensus 100 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~--~~~-~~~------~~~~~~la~~l~~~~~-~-~e~v~~~~sGseA~ 168 (476)
.|+|..+. |..++.+.+++.+.++.. ... +.+ .+...++.+.+++++. . .++++|++|+++++
T Consensus 20 ~yld~~~~------~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~~~~~~v~~~~g~t~~l 93 (403)
T TIGR01979 20 VYLDSAAT------SQKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFINAASDEEIVFTRGTTESI 93 (403)
T ss_pred EEEeCccc------cCCCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHH
Confidence 46664433 446788999998877652 111 111 1234577788888886 3 57899999999999
Q ss_pred HHHHHHHH--hccCCceEEEEeCCCCCCchhH---HhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcC
Q 011856 169 MGVLRLAR--AFTGRERIIKFEGCYHGHADPF---LVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN 243 (476)
Q Consensus 169 ~~al~~ar--~~~~~~~ii~~~~~yhg~~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~ 243 (476)
..++.... ....++.|++.+..|++..... ....|..+...+.. ..+ .-|++++++.+.+
T Consensus 94 ~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~-~~~-------------~~~~~~l~~~i~~- 158 (403)
T TIGR01979 94 NLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLD-DDG-------------TLDLDDLEKLLTE- 158 (403)
T ss_pred HHHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEecC-CCC-------------CCCHHHHHHHhcc-
Confidence 98887431 1344667777766666533222 11233322221111 001 0168999988864
Q ss_pred CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-CccccccchhhccCCCCchh--hhhhhcCCCC
Q 011856 244 KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GFRLAYGGAQEYFGVTPDLT--TLGKIIGGGL 320 (476)
Q Consensus 244 ~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~r~g~~~~~~~~g~~pDi~--t~sK~lg~G~ 320 (476)
++++|++..+++.+|.+.+ +++|.++|++||+++|+|++|. |... .... ...+|++ +++|.+|. .
T Consensus 159 --~~~lv~~~~~~~~tG~~~~----~~~i~~~~~~~~~~~ivD~a~~~g~~~---~~~~--~~~~d~~~~s~~K~~gp-~ 226 (403)
T TIGR01979 159 --KTKLVAITHVSNVLGTVNP----VEEIAKLAHQVGAKVLVDGAQAVPHMP---VDVQ--ALDCDFYVFSGHKMYGP-T 226 (403)
T ss_pred --CCeEEEEEcccccccccCC----HHHHHHHHHHcCCEEEEEchhhcCccc---cCcc--ccCCCEEEEecccccCC-C
Confidence 5778888878888999999 9999999999999999999995 2111 1111 2245765 57798762 2
Q ss_pred cEEEEEecHHHHHhhcCCCCc------------------cccCCCCCcHHHHHHHHHHHHHhcC---CCHHHHHHHHHHH
Q 011856 321 PVGAYGGRRDIMEMVAPAGPM------------------YQAGTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGE 379 (476)
Q Consensus 321 ~iG~~~~~~~i~~~l~~~~~~------------------~~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~ 379 (476)
.+|++++++++++.+.+.... ..+..-+.+...+++..++++.+.+ +...++..++.++
T Consensus 227 G~g~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~l~~~ 306 (403)
T TIGR01979 227 GIGVLYGKEELLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHELTAY 306 (403)
T ss_pred CceEEEEchHHHhcCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 389999999887766421000 0000113455666777777877654 3456667777777
Q ss_pred HHHHHHHHhhhcCCceEee----eeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCC----------
Q 011856 380 LTQGIIDAGKKAGHAICGG----YISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ---------- 445 (476)
Q Consensus 380 l~~~L~~~~~~~~~~~~v~----~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~---------- 445 (476)
+++.|+++. ++....+ ..+.++.+.+... ...++.+.|.++||.++.+.
T Consensus 307 l~~~l~~~~---g~~~~~~~~~~~~~~~v~~~~~~~--------------~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~ 369 (403)
T TIGR01979 307 ALERLGEIP---GLRIYGPRDAEDRGGIISFNVEGV--------------HPHDVGTILDEEGIAVRSGHHCAQPLMRRF 369 (403)
T ss_pred HHHHHhcCC---CEEEeCCCCccccCceEEEEeCCc--------------CHHHHHHHHhhCCEEEcchhhhhHHHHHHh
Confidence 777666531 1111111 1255666665321 12456778889999987542
Q ss_pred --CcceEEe--CCCcHHHHHHHHHHHHHHHHHh
Q 011856 446 --FEAGFTS--LAHSSDDIQHTITAAEKVKMRF 474 (476)
Q Consensus 446 --~~~~~~~--~~~t~e~i~~~~~~l~~~~~~~ 474 (476)
...+|++ ..+|++|+++++++|+++++.+
T Consensus 370 ~~~~~iRiS~~~~~t~~di~~l~~~l~~~~~~~ 402 (403)
T TIGR01979 370 GVPATCRASFYIYNTEEDIDALVEALKKVRKFF 402 (403)
T ss_pred CCCCEEEEEeccCCCHHHHHHHHHHHHHHHHHh
Confidence 2346775 4469999999999999887653
No 232
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.84 E-value=2.6e-18 Score=171.40 Aligned_cols=312 Identities=16% Similarity=0.148 Sum_probs=191.7
Q ss_pred CcHHHHHHHHHHHHhc--CCCCCC--CHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHHHhc----cCCceEEE
Q 011856 116 ADDQVLAALGETMKKG--TSFGAP--CLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAF----TGRERIIK 186 (476)
Q Consensus 116 ~~p~v~~a~~~~l~~~--~~~~~~--~~~~~~la~~l~~~~~-~~e~v~~~~sGseA~~~al~~ar~~----~~~~~ii~ 186 (476)
.+|.+.+++.+.+... ....++ .+.+.++.+.++++++ ..+++++++||++++..++..++.. .+++.|++
T Consensus 32 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~vl~ 111 (373)
T TIGR03812 32 PHPIAVKAYDMFIETNLGDPGLFPGTKKIEEEVVGSLGNLLHLPDAYGYIVSGGTEANIQAVRAAKNLAREEKRTPNIIV 111 (373)
T ss_pred chHHHHHHHHHHhhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCCCeEEeccHHHHHHHHHHHHHHHHhccCCCcEEEE
Confidence 5677788877765542 111122 3555788899999886 3567889999999999988765432 23356777
Q ss_pred EeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCH
Q 011856 187 FEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKP 266 (476)
Q Consensus 187 ~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~ 266 (476)
.+.+|+. ....+...|..+...+.... + ..|++++++.+++. ..+++++.| ++++|.+.+
T Consensus 112 ~~~~h~~-~~~~~~~~G~~~~~v~~~~~-~-------------~~d~~~l~~~l~~~--~~~vv~~~~-~~~tG~~~~-- 171 (373)
T TIGR03812 112 PESAHFS-FEKAAEMLGLELRYAPLDED-Y-------------TVDVKDVEDLIDDN--TIGIVGIAG-TTELGQIDD-- 171 (373)
T ss_pred CCcchHH-HHHHHHHcCCeEEEEeeCCC-C-------------CcCHHHHHHHHhhC--cEEEEEECC-CCCCCccCC--
Confidence 6665544 22233333433222111100 0 12799999998753 345566665 466888888
Q ss_pred HHHHHHHHHHHHhCCEEEEeccccCc-c-ccccc-hhhccCC---CCchhhh--hhhcCCCCcEEEEE-ecHHHHHhhcC
Q 011856 267 DFLNAIRRITKENGALLIFDEVMTGF-R-LAYGG-AQEYFGV---TPDLTTL--GKIIGGGLPVGAYG-GRRDIMEMVAP 337 (476)
Q Consensus 267 ~~l~~l~~l~~~~g~llI~DEv~~g~-r-~g~~~-~~~~~g~---~pDi~t~--sK~lg~G~~iG~~~-~~~~i~~~l~~ 337 (476)
+++|.++|++||+++|+|++|.++ . ...++ ......+ ..|.+++ .|...+++|.|+++ .++++++.+..
T Consensus 172 --~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K~~~~~~~~G~~~~~~~~~~~~l~~ 249 (373)
T TIGR03812 172 --IEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGVQSITIDPHKMGLSPIPAGGILFRSKSYLKYLSV 249 (373)
T ss_pred --HHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCccccCCCCCEEEECccccCCCcCCceEEEEeCHHHHhhhcc
Confidence 999999999999999999999754 1 11000 0001111 2244433 37333567888764 67888877642
Q ss_pred CCCccccC-----CCCCcHHHHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEe
Q 011856 338 AGPMYQAG-----TLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFT 409 (476)
Q Consensus 338 ~~~~~~~~-----t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~ 409 (476)
..+..... ..+.++..++++.++|+.+.+ ++..++..++.++++++|+++. ......+...++.+.+.
T Consensus 250 ~~~~~~~~~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~g----~~~~~~~~~~~v~~~~~ 325 (373)
T TIGR03812 250 DAPYLTVKKQATITGTRSGASAAATYAVIKYLGREGYRKIVAECMENTRYLVEELKKIG----FEPVIEPVLNIVAFEVD 325 (373)
T ss_pred cCcccCCCCCcceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCC----CeEEcCCCceEEEEEeC
Confidence 22211111 012345667778888887654 3567888888888888887752 21111223334333331
Q ss_pred cCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCC-CcceEE--eCCCcHHHHHHHHHHHHH
Q 011856 410 EGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ-FEAGFT--SLAHSSDDIQHTITAAEK 469 (476)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~-~~~~~~--~~~~t~e~i~~~~~~l~~ 469 (476)
+ ..++.+.|.++||++.... ...+|+ +..+|++|+++++++|++
T Consensus 326 -------------~---~~~v~~~L~~~gi~v~~~~~~~~iRis~~~~~t~edid~l~~~L~~ 372 (373)
T TIGR03812 326 -------------D---PEEVRKKLRDRGWYVSVTRCPKALRIVVMPHVTREHIEEFLEDLKE 372 (373)
T ss_pred -------------C---HHHHHHHHHHCCceeccCCCCCEEEEEEECCCCHHHHHHHHHHHhh
Confidence 1 1467888999999998763 345777 455899999999999975
No 233
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.84 E-value=8.1e-19 Score=174.08 Aligned_cols=327 Identities=13% Similarity=0.079 Sum_probs=188.9
Q ss_pred CCCCcHHHHHHHHHHHHhc-C-C--CCC----CCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceE
Q 011856 113 IGHADDQVLAALGETMKKG-T-S--FGA----PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERI 184 (476)
Q Consensus 113 lG~~~p~v~~a~~~~l~~~-~-~--~~~----~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~i 184 (476)
-|+..|.+.+++.+.-... . + .+. ..+...++.+.+++++ +.+++++++|+++++..+++.. ..+++.|
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~-g~~~i~~~~g~t~al~~~l~~~--~~~gd~V 86 (361)
T cd06452 10 GGRLTPEARKALIEWGDGYSVCDFCRGRLDEIEKPPIKDFHHDLAEFL-GMDEARVTPGAREGKFAVMHSL--CEKGDWV 86 (361)
T ss_pred CCCCCHHHHHHHHHHhcccCCccccccccccccCchHHHHHHHHHHHc-CCceEEEeCCHHHHHHHHHHHh--cCCCCEE
Confidence 3556788888887766331 1 1 111 2345678888898888 5589999999999999999842 2345566
Q ss_pred EEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCC----CCeEEEEEcccCCCCC
Q 011856 185 IKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK----GEIAAIILEPVVGNSG 260 (476)
Q Consensus 185 i~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~----~~~a~vi~ep~~~~~G 260 (476)
++...+|++.. ..+...|..+...+....... .-|++++++.+++.. .++++|+++.+++++|
T Consensus 87 l~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~~------------~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG 153 (361)
T cd06452 87 VVDGLAHYTSY-VAAERAGLNVREVPNTGHPEY------------HITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYG 153 (361)
T ss_pred EEcCCcchHHH-HHHHhcCCEEEEEecCCCCCc------------ccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCe
Confidence 66655554432 333444443332221110000 117899998886421 2567777777777788
Q ss_pred cccCCHHHHHHHHHHHHHhCCEEEEeccccCccccccchhhccCCCCchhhhhhhcCCCCcEEEEEecHHHHHhhcCCCC
Q 011856 261 FIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGP 340 (476)
Q Consensus 261 ~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pDi~t~sK~lg~G~~iG~~~~~~~i~~~l~~~~~ 340 (476)
.+.+ +++|.++|+++|+++|+||+|..-.. .+....++....+.+++|+++++.|+|++++++++++.+.....
T Consensus 154 ~~~~----~~~i~~~~~~~~~~vivD~a~~~g~~--~~~~~~~~~d~~~~s~~K~l~~~~~~G~l~~~~~~~~~l~~~~~ 227 (361)
T cd06452 154 NLHD----AKKIAKVCHEYGVPLLLNGAYTVGRM--PVSGKELGADFIVGSGHKSMAASAPIGVLATTEEWADIVFRTSQ 227 (361)
T ss_pred eecc----HHHHHHHHHHcCCeEEEECCcccCCc--CCCHHHcCCCEEEecCCccccCCCCeEEEEECHHHHHHHhcccc
Confidence 8877 99999999999999999999951110 11222234322344789999877799999999999988864322
Q ss_pred c-------cccCCCCCcHHHHHHHHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHhhhcCCceE--eeeeceeEEEEEec
Q 011856 341 M-------YQAGTLSGNPLAMTAGIHTLKRLKE-PGTYEYLNKITGELTQGIIDAGKKAGHAIC--GGYISGMFGFFFTE 410 (476)
Q Consensus 341 ~-------~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~--v~~~g~~~~i~~~~ 410 (476)
. ..+++ .++..+.++.++++.+.+ -+...+..++.+++++.|+++. ++... ..+...++.+...
T Consensus 228 ~~~~~~~~~~~~~--~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~l~---g~~v~~~~~~~~n~~~~~~~- 301 (361)
T cd06452 228 MFKIKEVELLGCT--LRGAPLVTLMASFPHVKERVKRWDEEVEKARWFVAELEKIE---GIKQLGEKPKNHDLMFFETP- 301 (361)
T ss_pred ccccceeeeeccc--cCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CeEEECCCCCCCceEEEEcC-
Confidence 1 11112 112234444555554322 1122222334466666666541 11110 0123334433321
Q ss_pred CCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCC-cceEEe-CCCcHHHHHHHHHHHHHHH
Q 011856 411 GPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-EAGFTS-LAHSSDDIQHTITAAEKVK 471 (476)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~-~~~~~~-~~~t~e~i~~~~~~l~~~~ 471 (476)
.+............++.+.|+++||++...+. ..+|+. ..+++++++.++++|+++.
T Consensus 302 ----~~~~~~~~~~~~~~~~~~~L~~~gI~~~~~~~~~~~ri~~~g~~~e~~~~l~~al~~~~ 360 (361)
T cd06452 302 ----SFDEIAKKHKRRGYFLYSELKKRGIHGIKPGLTRYFKLSTYGLTWEQVEYVVDAFKEIA 360 (361)
T ss_pred ----CcchhhhhccccchhHHHHHHHcCceEEcCCCceEEEEEecCCCHHHHHHHHHHHHHHh
Confidence 00000000011123688999999999654333 234553 3579999999999998764
No 234
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.84 E-value=3.5e-18 Score=169.76 Aligned_cols=297 Identities=16% Similarity=0.173 Sum_probs=188.6
Q ss_pred HHHHHHHHHHHhhCCC-C--CeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCc-hhHHhhcCCCCccCCCCCC
Q 011856 139 LLENVLAEMVISAVPS-I--EMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHA-DPFLVKAGSGVATLGLPDS 214 (476)
Q Consensus 139 ~~~~~la~~l~~~~~~-~--e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~-~~~~~~~g~~~~~~~~~~~ 214 (476)
+...++.+.++++++. . +.+++++||+++++.++... ...++++++...++|+.. .......|..+...+.+..
T Consensus 35 ~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l--~~~~~~vlv~~~~~~~~~~~~~a~~~g~~~~~v~~~~~ 112 (363)
T TIGR02326 35 IVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSA--VPKDGKLLVVINGAYGARIVQIAEYLGIPHHVVDTGEV 112 (363)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhc--CCCCCeEEEEeCChhhHHHHHHHHHcCCceEEEeCCCC
Confidence 3445677788888762 2 36999999999999999842 345667777777777753 2222333443332221111
Q ss_pred CCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCccc
Q 011856 215 PGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRL 294 (476)
Q Consensus 215 ~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~ 294 (476)
.. -|++++++++++++ +++.+.+..+.+.+|.+.| +++|.++|++||+++|+|++|+ +.
T Consensus 113 ~~--------------~d~~~l~~~l~~~~-~~~~v~~~~~~~~tG~~~~----i~~I~~l~~~~g~~livD~~~~-~g- 171 (363)
T TIGR02326 113 EP--------------PDVVEVEAILAADP-AITHIALVHCETTTGILNP----IEAVAKLAHRHGKVTIVDAMSS-FG- 171 (363)
T ss_pred CC--------------CCHHHHHHHHhhCC-CccEEEEEeecCCccccCc----HHHHHHHHHHcCCEEEEEcccc-cc-
Confidence 11 17999999997642 4555666666677899998 9999999999999999999885 31
Q ss_pred cccchhhccCCCCchh--hhhhhcCCCCcEEEEEecHHHHHhhcCCCCc-c--------------ccCCCCCcHHHHHHH
Q 011856 295 AYGGAQEYFGVTPDLT--TLGKIIGGGLPVGAYGGRRDIMEMVAPAGPM-Y--------------QAGTLSGNPLAMTAG 357 (476)
Q Consensus 295 g~~~~~~~~g~~pDi~--t~sK~lg~G~~iG~~~~~~~i~~~l~~~~~~-~--------------~~~t~~~~~~~~aaa 357 (476)
+.......+ .+|++ +++|+++++..+|+++++++.++.+...... . ....|..++..+.+.
T Consensus 172 ~~~~~~~~~--~~D~~~~s~~K~l~~p~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~~~~~~~al 249 (363)
T TIGR02326 172 GIPIDIAEL--HIDYLISSANKCIQGVPGFGFVIARQAELAACKGNARSLSLDLYDQWRCMEDNHGKWRFTSPTHVVHAF 249 (363)
T ss_pred Ccccchhhc--CccEEEecCccccccCCcceEEEECHHHHHHhhcCCCceeecHHHHHHHHhccCCCCCCCCcHHHHHHH
Confidence 011112222 35655 6789997655589999999887765421110 0 012345577777777
Q ss_pred HHHHHHhcC----CCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHH
Q 011856 358 IHTLKRLKE----PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRG 433 (476)
Q Consensus 358 ~aal~~~~~----~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (476)
.++++.+.+ ++..++++++.+++++.|+++.......... ..+.+.++.+...+ ......+.+.
T Consensus 250 ~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~-~~~~~~~~~~~~~~-----------~~~~~~v~~~ 317 (363)
T TIGR02326 250 AQALLELEKEGGVAARHQRYQQNQKTLVAGMRALGFEPLLDDEI-QSPIITSFYSPEDP-----------DYRFADFYQR 317 (363)
T ss_pred HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcCCeeccCccc-CCceEEEEECCCCC-----------CCCHHHHHHH
Confidence 778876543 2455677777888888877652211101011 12333444442210 0113567888
Q ss_pred HHHCCeEeccCC---CcceEEe--CCCcHHHHHHHHHHHHHHHH
Q 011856 434 MLEEGVYFAPSQ---FEAGFTS--LAHSSDDIQHTITAAEKVKM 472 (476)
Q Consensus 434 l~~~Gv~~~~~~---~~~~~~~--~~~t~e~i~~~~~~l~~~~~ 472 (476)
|.++||.+.++. ...+|++ ..++.+|+++++++|++++.
T Consensus 318 L~~~gi~v~~g~~~~~~~iRi~~~~~~~~edv~~~l~~l~~~l~ 361 (363)
T TIGR02326 318 LKEQGFVIYPGKVSQVDCFRIGNIGEVDAADITRLLTAIGKAMY 361 (363)
T ss_pred HHHCCEEEECCcCCCCCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 999999998874 2457885 34699999999999998763
No 235
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.83 E-value=1.5e-18 Score=162.22 Aligned_cols=323 Identities=21% Similarity=0.217 Sum_probs=197.2
Q ss_pred EecccChhhccCCCCcHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCC
Q 011856 102 IDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGR 181 (476)
Q Consensus 102 iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~~~~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~ 181 (476)
+||.|. +.-| .+|++.+++.++-.-+..-++.++.-.++.+++++.+ +.+.++|++|||.||..+|. ..+.+
T Consensus 2 ~~f~SD---n~~g-~~~~m~eam~~a~~~~~~~YG~D~~~~~~e~~~ae~~-g~~a~~Fv~sGT~aN~lal~---~~~~~ 73 (342)
T COG2008 2 IDFRSD---NVAG-PTPEMREALAAANAVGDDVYGEDPTTNALEQRIAELF-GKEAALFVPSGTQANQLALA---AHCQP 73 (342)
T ss_pred CccccC---ccCC-CCHHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHHh-CCceEEEecCccHHHHHHHH---HhcCC
Confidence 466665 3333 7999999998765444444557788889999999998 55999999999999999999 55666
Q ss_pred ceEEEEeCCCCCCchhH--HhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhc---CCCCeEEEEEcccC
Q 011856 182 ERIIKFEGCYHGHADPF--LVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFEN---NKGEIAAIILEPVV 256 (476)
Q Consensus 182 ~~ii~~~~~yhg~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~---~~~~~a~vi~ep~~ 256 (476)
...++....-|-..+.+ ....+........+...|.. ++++++..+.. +...+..++.|...
T Consensus 74 ~~~vi~~~~aHi~~~E~Ga~~~~~~~~~~~~~~g~~Gkl-------------t~e~v~~~i~~~d~~~~~~~~~~~e~~~ 140 (342)
T COG2008 74 GESVICHETAHIYTDECGAPEFFGGGQKLPIVPGADGKL-------------TPEDVEAAIRPDDIHHAPTPLAVLENTA 140 (342)
T ss_pred CCeEEEeccccceecccCcHHHHcCCceeccCCCCCCCc-------------CHHHHHHhhcCCCcccCCCceEEEeecc
Confidence 66666666666544322 21112111111112122211 78999998864 22345666666666
Q ss_pred CCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc--Cc-cccccchhhccCCCCchh--hhhhhcCCCCcEEEE-EecHH
Q 011856 257 GNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT--GF-RLAYGGAQEYFGVTPDLT--TLGKIIGGGLPVGAY-GGRRD 330 (476)
Q Consensus 257 ~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~--g~-r~g~~~~~~~~g~~pDi~--t~sK~lg~G~~iG~~-~~~~~ 330 (476)
+++|.+.|.++ |++|.++|++||+.|.+|-+.- .. ..+ -....+.-..|++ ++||.+ |+|+|++ +++++
T Consensus 141 te~GtVy~l~e-l~~i~~~~k~~~l~LHmDGAR~~nA~valg--~~~~~~~~~~D~v~~~~tK~g--~~~~gAiv~gn~~ 215 (342)
T COG2008 141 TEGGTVYPLDE-LEAISAVCKEHGLPLHMDGARLANALVALG--VALKTIKSYVDSVSFCLTKGG--GAPVGAIVFGNRD 215 (342)
T ss_pred CCCceecCHHH-HHHHHHHHHHhCCceeechHHHHHHHHHcC--CCHHHHHhhCCEEEEecccCC--cceeeeEEEcCHH
Confidence 68888877555 9999999999999999996652 11 111 1111122234665 466754 5689988 77899
Q ss_pred HHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHH----HHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEE
Q 011856 331 IMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTY----EYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGF 406 (476)
Q Consensus 331 i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~----~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i 406 (476)
+++.++...+. .++-++-.-+..++++..|+ +++. .+..++..+|.++|++. .+.....+...+++.+
T Consensus 216 ~~~~a~~~rK~-~Ggl~~k~r~laA~~~~~l~----~~~~~~~~~Han~mA~~La~~~~~~---~G~~~~~~~~tN~vf~ 287 (342)
T COG2008 216 FAKRARRWRKR-AGGLMRKARFLAAQGLYALE----DDVWRLAADHANAMAARLAEGLEAK---PGVKLAFPVETNMVFV 287 (342)
T ss_pred HHHHHHHHHHH-hcccHhhhhHHHHHHHHHHh----ccHHHHHHHHHHHHHHHHHHhhhhc---CCceeccCCcccEEEE
Confidence 88877532222 23333444455555555554 3322 22333355565555532 2333333345566666
Q ss_pred EEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCCcceEE--eCCCcHHHHHHHHHHHHHHH
Q 011856 407 FFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAEKVK 471 (476)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~--~~~~t~e~i~~~~~~l~~~~ 471 (476)
.+.+. ..........+..+|+++.+.+ ..+|+ +...+++|++++++.+++++
T Consensus 288 ~l~~~------------~i~~l~~~~~~~~~~~~~~~~~-~~vRfvts~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 288 RLPES------------AIEALRLAGALFYRGVLIGAHG-EIVRFVTSWATSEEDVDELVAAIKALL 341 (342)
T ss_pred ECChH------------HHHHHHhhchhheeeeeccCCC-ceEEEEeeccCCHHHHHHHHHHHHHhh
Confidence 55321 1122334455667788877765 34554 78899999999999988764
No 236
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.83 E-value=2e-17 Score=166.80 Aligned_cols=326 Identities=15% Similarity=0.163 Sum_probs=204.6
Q ss_pred CCEEEecccChhhccCCCCcHHHHHHHHHHHHhcC--C-CCCC------CHHHHHHHHHHHhhCC--CCCeEEEeCCHHH
Q 011856 98 GNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT--S-FGAP------CLLENVLAEMVISAVP--SIEMVRFVNSGTE 166 (476)
Q Consensus 98 G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~--~-~~~~------~~~~~~la~~l~~~~~--~~e~v~~~~sGse 166 (476)
+..|+|..+. +..++.+.+++.+.+.... . .+.. .+...++.+.+++++. ..++|+|++|+++
T Consensus 23 ~~iYld~a~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~ 96 (406)
T PRK09295 23 PLAYLDSAAS------AQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINARSAEELVFVRGTTE 96 (406)
T ss_pred ceEEEeCccc------ccCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHH
Confidence 3467886654 3357899999988886521 1 1111 2335577788888885 3579999999999
Q ss_pred HHHHHHHHHH--hccCCceEEEEeCCCCCCchhHHh---hcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHh
Q 011856 167 ACMGVLRLAR--AFTGRERIIKFEGCYHGHADPFLV---KAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFE 241 (476)
Q Consensus 167 A~~~al~~ar--~~~~~~~ii~~~~~yhg~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~ 241 (476)
++..+++... ...++++|++.+..||+....... ..|..+...+... .+ .-|+++|++.++
T Consensus 97 ~l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~-~~-------------~~d~~~l~~~i~ 162 (406)
T PRK09295 97 GINLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNP-DG-------------TLQLETLPALFD 162 (406)
T ss_pred HHHHHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCC-CC-------------CCCHHHHHHhcC
Confidence 9998887421 224567788887777765433222 2233222211110 01 017899998886
Q ss_pred cCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCccccccchhhccCCCCchhh--hhhhcCCC
Q 011856 242 NNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTT--LGKIIGGG 319 (476)
Q Consensus 242 ~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pDi~t--~sK~lg~G 319 (476)
+ ++++|++..+++++|.+.| +++|.++|+++|+++|+|++|.-... ..... ...+|+++ ++|.+|.
T Consensus 163 ~---~t~lv~l~~~~n~tG~~~~----~~~i~~~~~~~~~~vivD~a~~~g~~--~~~~~--~~~~D~~~~s~~K~~gp- 230 (406)
T PRK09295 163 E---RTRLLAITHVSNVLGTENP----LAEMIALAHQHGAKVLVDGAQAVMHH--PVDVQ--ALDCDFYVFSGHKLYGP- 230 (406)
T ss_pred C---CcEEEEEecchhcccccCC----HHHHHHHHHHcCCEEEEEcccccCcc--ccCch--hcCCCEEEeehhhccCC-
Confidence 3 5778888888888999999 99999999999999999999952111 11111 23457765 5596662
Q ss_pred CcEEEEEecHHHHHhhcCC--C-Cc----------------cccCCCCCcHHHHHHHHHHHHHhcC---CCHHHHHHHHH
Q 011856 320 LPVGAYGGRRDIMEMVAPA--G-PM----------------YQAGTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKIT 377 (476)
Q Consensus 320 ~~iG~~~~~~~i~~~l~~~--~-~~----------------~~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~ 377 (476)
-.+|++++++++++.+.+. + .. ..+-+-+.|..+..+..++++.+.+ +...++.+++.
T Consensus 231 ~G~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~ 310 (406)
T PRK09295 231 TGIGILYVKEALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQNLM 310 (406)
T ss_pred CCcEEEEEchHhHhhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence 2389999999987765421 0 00 0011114567778888888887765 34556666677
Q ss_pred HHHHHHHHHHhhhcCCceEe-eeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCC-----------
Q 011856 378 GELTQGIIDAGKKAGHAICG-GYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ----------- 445 (476)
Q Consensus 378 ~~l~~~L~~~~~~~~~~~~v-~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~----------- 445 (476)
++++++|.++. ++.... .....++.+.+... ...++.+.|.++||.++.+.
T Consensus 311 ~~l~~~l~~~~---~~~~~~~~~~~~iv~~~~~~~--------------~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~ 373 (406)
T PRK09295 311 HYALSQLESVP---DLTLYGPQNRLGVIAFNLGKH--------------HAYDVGSFLDNYGIAVRTGHHCAMPLMAYYN 373 (406)
T ss_pred HHHHHHHhcCC---CEEEeCCCCCceEEEEEECCc--------------CHHHHHHHHHhCCeEEeccccchHHHHHHHC
Confidence 77777666531 111110 11234555544211 12456677888999987542
Q ss_pred -CcceEEe--CCCcHHHHHHHHHHHHHHHH
Q 011856 446 -FEAGFTS--LAHSSDDIQHTITAAEKVKM 472 (476)
Q Consensus 446 -~~~~~~~--~~~t~e~i~~~~~~l~~~~~ 472 (476)
...+|++ ...|++|||.++++|+++..
T Consensus 374 ~~~~iRiS~~~ynt~~did~l~~~l~~i~~ 403 (406)
T PRK09295 374 VPAMCRASLAMYNTHEEVDRLVAGLQRIHR 403 (406)
T ss_pred CCCEEEEEccCCCCHHHHHHHHHHHHHHHH
Confidence 1236765 56799999999999998754
No 237
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.82 E-value=1.2e-17 Score=166.17 Aligned_cols=319 Identities=16% Similarity=0.161 Sum_probs=194.9
Q ss_pred CcHHHHHHHHHHHHhcCCCC-CCCHHHHHHHHHHHhhCCC---CCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCC
Q 011856 116 ADDQVLAALGETMKKGTSFG-APCLLENVLAEMVISAVPS---IEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCY 191 (476)
Q Consensus 116 ~~p~v~~a~~~~l~~~~~~~-~~~~~~~~la~~l~~~~~~---~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~y 191 (476)
..+.+.+++.+... +.. ...+...++.+.++++++. .+.+++++||+++++.++... ...++++++...++
T Consensus 16 ~~~~~~~a~~~~~~---~~~~~~~~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l--~~~~~~vlv~~~~~ 90 (368)
T PRK13479 16 TSRTVREAMLRDWG---SWDDDFNALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSL--VPRDGKVLVPDNGA 90 (368)
T ss_pred CCHHHHHHhCCCCC---CCChHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhc--cCCCCeEEEEeCCc
Confidence 35666666654431 111 0124567788888888753 245889999999999999843 34567788887777
Q ss_pred CCCch-hHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHH
Q 011856 192 HGHAD-PFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLN 270 (476)
Q Consensus 192 hg~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~ 270 (476)
++... ..+...|..+...+.+... ..|++++++.++++ +++++|.+..+++.+|.+.| ++
T Consensus 91 ~~~~~~~~~~~~g~~~~~i~~~~~~--------------~~d~~~l~~~l~~~-~~~~~v~~~~~~~~tG~~~~----~~ 151 (368)
T PRK13479 91 YGARIAQIAEYLGIAHVVLDTGEDE--------------PPDAAEVEAALAAD-PRITHVALVHCETTTGILNP----LD 151 (368)
T ss_pred hHHHHHHHHHHcCCcEEEEECCCCC--------------CCCHHHHHHHHHhC-CCCcEEEEEcccCccccccC----HH
Confidence 76431 2223334433322211101 12799999998754 24556666666667888888 89
Q ss_pred HHHHHHHHhCCEEEEeccccCccccccchhhccCCCCchh--hhhhhcCCCCcEEEEEecHHHHHhhcCCCCcc------
Q 011856 271 AIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLT--TLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMY------ 342 (476)
Q Consensus 271 ~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pDi~--t~sK~lg~G~~iG~~~~~~~i~~~l~~~~~~~------ 342 (476)
+|.++|+++|+++|+|++| +|.. ... +.....+|++ +++|.+.+...+|++++++++++.+......+
T Consensus 152 ~i~~l~~~~~~~livDa~~-~~g~-~~~--~~~~~~~d~~v~s~~K~l~g~~G~G~l~~~~~~~~~~~~~~~~~~~~~~~ 227 (368)
T PRK13479 152 EIAAVAKRHGKRLIVDAMS-SFGA-IPI--DIAELGIDALISSANKCIEGVPGFGFVIARRSELEACKGNSRSLSLDLYD 227 (368)
T ss_pred HHHHHHHHcCCEEEEEccc-ccCC-ccc--cccccCceEEEecCccccccCCCceEEEECHHHHHHhhcCCCCeeecHHH
Confidence 9999999999999999777 3411 011 1112235655 67898865444799999999988775421110
Q ss_pred --------ccCCCCCcHHHHHHHHHHHHHhcC----CCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEec
Q 011856 343 --------QAGTLSGNPLAMTAGIHTLKRLKE----PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTE 410 (476)
Q Consensus 343 --------~~~t~~~~~~~~aaa~aal~~~~~----~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~ 410 (476)
....|+.+...+.+..++++.+.+ ++..+++.++.+++++.|+++..........+ ......+.+..
T Consensus 228 ~~~~~~~~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~-~~~~~~~~~~~ 306 (368)
T PRK13479 228 QWAYMEKTGQWRFTPPTHVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRALGFEPLLDAEIQ-SPIIVTFHAPA 306 (368)
T ss_pred HHhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcCCcccCCchhc-CceEEEEECCC
Confidence 011135566666777777776543 34455666677777777766422111000011 11222232221
Q ss_pred CCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCC---cceEEeC--CCcHHHHHHHHHHHHHHHHHh
Q 011856 411 GPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF---EAGFTSL--AHSSDDIQHTITAAEKVKMRF 474 (476)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~---~~~~~~~--~~t~e~i~~~~~~l~~~~~~~ 474 (476)
.+ .....++.+.|.++||.+.++.. ..+|++. .++++|+++++++|+++++++
T Consensus 307 ~~-----------~~~~~~l~~~L~~~gi~v~~g~~~~~~~iRis~~~~~t~edi~~~l~~L~~~l~~~ 364 (368)
T PRK13479 307 DP-----------AYDFKEFYERLKEQGFVIYPGKLTQVDTFRIGCIGDVDAADIRRLVAAIAEALYWM 364 (368)
T ss_pred CC-----------CcCHHHHHHHHHHCCEEEecCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHHHc
Confidence 10 01125788899999999987632 3578853 459999999999999998764
No 238
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.82 E-value=1.9e-17 Score=163.60 Aligned_cols=322 Identities=14% Similarity=0.108 Sum_probs=191.4
Q ss_pred EEEecccChhhccCCC--CcHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHh
Q 011856 100 EYIDYVGSWGPAIIGH--ADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARA 177 (476)
Q Consensus 100 ~~iD~~~~~~~~~lG~--~~p~v~~a~~~~l~~~~~~~~~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~ 177 (476)
.+|+-.+.+ .+||- .++++.+++.+.++. +....++..++++++++++ +.+++++++|+++|+..+++..
T Consensus 9 ~~ina~g~~--t~~g~s~~~~~v~~a~~~~~~~---~~~~~~~~~~~~~~~a~~~-g~~~~~~~~g~t~al~~al~al-- 80 (363)
T TIGR01437 9 KVINASGKM--TILGVSTVSDEVADAQKRGAQN---YFEIKELVNKTGEYIANLL-GVEDAVIVSSASAGIAQSVAAV-- 80 (363)
T ss_pred eEEECCcEe--ecCCCCCCCHHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHhh-CCCeEEEEcCHHHHHHHHHHHH--
Confidence 445544333 45666 489999999998764 3345677888999999988 6678999999999999999854
Q ss_pred ccCCc---------------eEEEEeCCCCCCc---hhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHH
Q 011856 178 FTGRE---------------RIIKFEGCYHGHA---DPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENL 239 (476)
Q Consensus 178 ~~~~~---------------~ii~~~~~yhg~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~ 239 (476)
..+++ .||+..+.|..+. ...+...|..+...+. . ..-|+++++++
T Consensus 81 ~~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~---~-------------~~~d~~~le~a 144 (363)
T TIGR01437 81 ITRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGY---A-------------NECSAEQLEAA 144 (363)
T ss_pred hcCCCcchhhcccccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcC---C-------------CCCCHHHHHHh
Confidence 22333 6777665554321 2333334432221111 0 01289999999
Q ss_pred HhcCCCCeEEEE-EcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCccccccchhhccCCCCchhh--hhhhc
Q 011856 240 FENNKGEIAAII-LEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTT--LGKII 316 (476)
Q Consensus 240 l~~~~~~~a~vi-~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pDi~t--~sK~l 316 (476)
+.. ++++++ ++..++.+|.+.+ +++|.++|++||+++|+|++|. ... . ....+| .|+++ .+|.+
T Consensus 145 i~~---~t~ai~~v~~~~~~~g~~~~----~~~i~~~a~~~gi~vivD~a~~-~~~--~-~~~~~g--~D~~~~S~~K~l 211 (363)
T TIGR01437 145 ITE---KTAAILYIKSHHCVQKSMLS----VEDAAQVAQEHNLPLIVDAAAE-EDL--Q-KYYRLG--ADLVIYSGAKAI 211 (363)
T ss_pred cCh---hceEEEEEecCCCCcCCcCC----HHHHHHHHHHcCCeEEEECCCC-Cch--H-HHHHcC--CCEEEEeCCccc
Confidence 974 445544 4554456777878 8999999999999999999996 200 0 011123 47664 56988
Q ss_pred CCCCcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHhhhcCCc
Q 011856 317 GGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHA 394 (476)
Q Consensus 317 g~G~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 394 (476)
+ |+++|++++++++++.+...... ....+......+++..++++.+.+ .+..+...++.++++++|.++. .....
T Consensus 212 ~-gp~~G~l~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~gl~aAl~~~~~~~~~~~~~~~~~~~~l~~~L~~i~-g~~~~ 288 (363)
T TIGR01437 212 E-GPTSGLVLGKKKYIEWVKLQSKG-IGRAMKVGKENILGLTAALEQYLSTGKESGAEMVAKLTPFIEALNTLK-GVSAS 288 (363)
T ss_pred C-CCceEEEEEcHHHHHHHHhccCC-CcceeccCHHHHHHHHHHHHHHHccCcccHHHHHHHHHHHHHHHhcCC-CeEEE
Confidence 5 56799999998888776421100 000111112334455556665543 4555555566667777777641 11111
Q ss_pred eEeeeece---eEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCC--eEeccC--CCcceEE-eCCCcHHHHHHHHHH
Q 011856 395 ICGGYISG---MFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEG--VYFAPS--QFEAGFT-SLAHSSDDIQHTITA 466 (476)
Q Consensus 395 ~~v~~~g~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G--v~~~~~--~~~~~~~-~~~~t~e~i~~~~~~ 466 (476)
......+. ...+.|.... ......++.+.|.++| |+.++. ....+++ ....+++|++.++++
T Consensus 289 ~~~~~~~~~~~~~~v~~~~~~----------~g~~~~~l~~~L~~~~~~I~~r~~~~~~~~~~l~~~~~~~~e~~~~~~~ 358 (363)
T TIGR01437 289 IVQDEAGRDIARAEIRFDESE----------LGMTAADVVQALRQGEPAIYTRGYKANEGIIEIDPRSVTGGQLDIIVER 358 (363)
T ss_pred EecCCCCCcCceEEEEEeccC----------CCCCHHHHHHHHhcCCCCEEEeeeeecCCeEEEEeecCCHHHHHHHHHH
Confidence 00011111 1222232100 0112367888888777 777642 2234555 235679999999999
Q ss_pred HHHHH
Q 011856 467 AEKVK 471 (476)
Q Consensus 467 l~~~~ 471 (476)
|++++
T Consensus 359 l~~~~ 363 (363)
T TIGR01437 359 IREIV 363 (363)
T ss_pred HHHhC
Confidence 98763
No 239
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.82 E-value=1.8e-17 Score=167.01 Aligned_cols=321 Identities=15% Similarity=0.044 Sum_probs=186.7
Q ss_pred CCCCcHHHHHHHHHHHHhc---C--CC-C---CCCHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHHHhccCCc
Q 011856 113 IGHADDQVLAALGETMKKG---T--SF-G---APCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRE 182 (476)
Q Consensus 113 lG~~~p~v~~a~~~~l~~~---~--~~-~---~~~~~~~~la~~l~~~~~-~~e~v~~~~sGseA~~~al~~ar~~~~~~ 182 (476)
.|..++.+.+++.+.++.. . .. . .......++ +.+ ++++ .+++|+|++|+|+++..+++......+++
T Consensus 36 ~g~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~l~g~~~~~v~~~~~~t~~l~~~~~~~~~~~~~~ 113 (406)
T TIGR01814 36 LGLMPKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESL-LKL-RLVGAKEDEVVVMNTLTINLHLLLASFYKPTPKR 113 (406)
T ss_pred cCcCcHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhh-ccc-cccCCCCCcEEEeCCchHHHHHHHHHhcCCcCCc
Confidence 3445788999988776541 1 11 1 111222333 334 5565 56799999999999999988431111123
Q ss_pred eEEEEeCCCCCCchhHH----hhcCCCCcc--CCCCC-CCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEccc
Q 011856 183 RIIKFEGCYHGHADPFL----VKAGSGVAT--LGLPD-SPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPV 255 (476)
Q Consensus 183 ~ii~~~~~yhg~~~~~~----~~~g~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~ 255 (476)
.+|+....-|......+ ...|..+.. ...+. ..+ .-|++++++.++...+++++|+++.+
T Consensus 114 ~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~g-------------~~~~~~l~~~~~~~~~~t~lv~~~~v 180 (406)
T TIGR01814 114 YKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEPREEE-------------TLRLEDILDTIEKNGDDIAVILLSGV 180 (406)
T ss_pred cEEEecCCCCChHHHHHHHHHHhcCCCcccceEEeccCCCC-------------ccCHHHHHHHHHhcCCCeEEEEEecc
Confidence 34445444444322222 122322100 00000 000 01688898888654457899999999
Q ss_pred CCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCccccc-cchhhccCCCCchhhhhhhcCCCCcEEEEEecHHHHHh
Q 011856 256 VGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY-GGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEM 334 (476)
Q Consensus 256 ~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~-~~~~~~~g~~pDi~t~sK~lg~G~~iG~~~~~~~i~~~ 334 (476)
++++|.+.| +++|.++|++||+++++|++|+. |. ....+.+|++..+.+..|.+.+|.. |++...++..+.
T Consensus 181 ~~~tG~~~~----~~~i~~~~~~~g~~~~vD~aq~~---G~~~id~~~~gvD~~~~s~hK~l~g~pG-~~l~v~~~~~~~ 252 (406)
T TIGR01814 181 QYYTGQLFD----MAAITRAAHAKGALVGFDLAHAV---GNVPLDLHDWGVDFACWCTYKYLNAGPG-AGAFVHEKHAHT 252 (406)
T ss_pred ccccceecC----HHHHHHHHHHcCCEEEEEccccc---CCcccccccCCCCEEEEcCccccCCCCC-eEEEEehhhhhh
Confidence 999999999 99999999999999999999951 11 1112223433333456799876543 444443333333
Q ss_pred hcCCCCcccc----------C----------CCCCcHHHHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHHHHHHhhhc
Q 011856 335 VAPAGPMYQA----------G----------TLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKA 391 (476)
Q Consensus 335 l~~~~~~~~~----------~----------t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~ 391 (476)
+.+......+ . ..+.|..++++..++|+.+.+ +...++.+++.+++++.|+++....
T Consensus 253 ~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~ 332 (406)
T TIGR01814 253 ERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQAGMEALRKKSLLLTDYLEELIKARCGGP 332 (406)
T ss_pred cCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 3321000000 0 112456777778888988755 4556677777777777776541100
Q ss_pred C-Cce----EeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCCcceEEeC---CCcHHHHHHH
Q 011856 392 G-HAI----CGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFTSL---AHSSDDIQHT 463 (476)
Q Consensus 392 ~-~~~----~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~~~---~~t~e~i~~~ 463 (476)
+ +.. +....+.++.+.+. . ...++.+.|.++||++.......+|+++ .+|++|||++
T Consensus 333 ~~~~i~~~~~~~~r~~~v~~~~~-~--------------~~~~~~~~L~~~gi~v~~~~~~~iRiS~~~~~nt~~did~l 397 (406)
T TIGR01814 333 PVLTIITPRDHAQRGCQLSLTHP-V--------------PGKAVFQALIKRGVIGDKREPSVIRVAPVPLYNTFVDVYDA 397 (406)
T ss_pred CceEEeCCCChhhcCCeEEEEec-C--------------CHHHHHHHHHHCCEEEeccCCCeEEEechhccCCHHHHHHH
Confidence 1 110 11123445555542 0 1256788888999998755445678764 5599999999
Q ss_pred HHHHHHHH
Q 011856 464 ITAAEKVK 471 (476)
Q Consensus 464 ~~~l~~~~ 471 (476)
+++|++++
T Consensus 398 ~~~l~~~~ 405 (406)
T TIGR01814 398 VNVLEEIL 405 (406)
T ss_pred HHHHHHHh
Confidence 99998865
No 240
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.82 E-value=3.7e-17 Score=162.05 Aligned_cols=325 Identities=22% Similarity=0.241 Sum_probs=216.6
Q ss_pred EEEecccChhhccCCCCcHHHHHHHHHHHHhc---CCCCC------CCHHHHHHHHHHHhhCC-C-CCeEEEeCCHHHHH
Q 011856 100 EYIDYVGSWGPAIIGHADDQVLAALGETMKKG---TSFGA------PCLLENVLAEMVISAVP-S-IEMVRFVNSGTEAC 168 (476)
Q Consensus 100 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~---~~~~~------~~~~~~~la~~l~~~~~-~-~e~v~~~~sGseA~ 168 (476)
.|+|..++ +..+..|.+++.+...+. .+.+. ..+..++.++.+++++. + .+.|+||.+.|+++
T Consensus 24 vylD~aa~------~~~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~~eIvft~~tT~al 97 (405)
T COG0520 24 VYLDNAAT------SQKPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADSSDEIVFTRGTTEAL 97 (405)
T ss_pred EEecCccc------ccCCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChhHHH
Confidence 57776554 336889999999887652 12221 13456677888888886 4 48899999999999
Q ss_pred HHHHHHH-HhccCCceEEEEeCCCCCCchhHHhhc---CCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCC
Q 011856 169 MGVLRLA-RAFTGRERIIKFEGCYHGHADPFLVKA---GSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK 244 (476)
Q Consensus 169 ~~al~~a-r~~~~~~~ii~~~~~yhg~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~ 244 (476)
..+.... +....++.||+.+--+|.......... |..+...+.. ..+. -++++++..+.
T Consensus 98 n~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~-~~g~-------------~~~~~~~~~i~--- 160 (405)
T COG0520 98 NLVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLD-DDGL-------------LDLDALEKLIT--- 160 (405)
T ss_pred HHHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecC-CCCC-------------cCHHHHHHhcC---
Confidence 9988843 224556889998888888776665544 3322222211 1121 16888888776
Q ss_pred CCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCccccccchhhccCCCCchhhhh--hhcCCCCcE
Q 011856 245 GEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLG--KIIGGGLPV 322 (476)
Q Consensus 245 ~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pDi~t~s--K~lg~G~~i 322 (476)
+++++|.+..+.+.+|.+.| +++|.++|+++|+++++|-+|+- + ....+.-.+..|++.|| |.+.|.-.+
T Consensus 161 ~~Tklvais~vSn~tG~~~p----v~~I~~la~~~ga~v~VDaaq~~---~-h~~idv~~l~~Df~afsgHKwl~gP~Gi 232 (405)
T COG0520 161 PKTKLVALSHVSNVTGTVNP----VKEIAELAHEHGALVLVDAAQAA---G-HLPIDVQELGCDFLAFSGHKWLLGPTGI 232 (405)
T ss_pred CCceEEEEECccccccccch----HHHHHHHHHHcCCEEEEECcccc---C-ccCCCchhcCCCEEEEcccccccCCCce
Confidence 37999999999999999999 99999999999999999999951 1 11122223356888776 866643459
Q ss_pred EEEEecHHHHHhhcCC---CCccc------cCCC----------CCcHHHHHHHHHHHHHhcC---CCHHHHHHHHHHHH
Q 011856 323 GAYGGRRDIMEMVAPA---GPMYQ------AGTL----------SGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGEL 380 (476)
Q Consensus 323 G~~~~~~~i~~~l~~~---~~~~~------~~t~----------~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l 380 (476)
|.+.+++++++.+.+. +.+.. ..++ ..|.....+..++++.+++ ++..++.+++.+++
T Consensus 233 GvLy~r~~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~~L~~~~ 312 (405)
T COG0520 233 GVLYVRKELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHERELTEYL 312 (405)
T ss_pred EEEEEchHHHhhcCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 9999999999987541 11000 0011 1244444455567776655 45666677777777
Q ss_pred HHHHHHHhhhcCCceEee---eeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCCcc---------
Q 011856 381 TQGIIDAGKKAGHAICGG---YISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEA--------- 448 (476)
Q Consensus 381 ~~~L~~~~~~~~~~~~v~---~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~--------- 448 (476)
.++|.++.. +....+ ..+.++.+.+... ...++...|.++||.++.+....
T Consensus 313 ~~~L~~~~~---v~i~g~~~~~r~~~vsF~v~~~--------------~~~dv~~~L~~~gI~vr~g~~ca~p~~~~~~~ 375 (405)
T COG0520 313 LEGLSELPG---VEIYGPPDADRGGIVSFNVKGI--------------HPHDVATLLDEKGIAVRAGHHCAQPLHRLLGV 375 (405)
T ss_pred HHHHhcCCC---eEEecCCcccCceEEEEEeCCC--------------CHHHHHHHHHhCCeEEEeccccccHHHHhcCC
Confidence 777766421 111111 3566666666432 12678889999998888764322
Q ss_pred ---eEE--eCCCcHHHHHHHHHHHHHHHH
Q 011856 449 ---GFT--SLAHSSDDIQHTITAAEKVKM 472 (476)
Q Consensus 449 ---~~~--~~~~t~e~i~~~~~~l~~~~~ 472 (476)
+|+ .+.+|+||||+++++|+++.+
T Consensus 376 ~~~iR~S~~~YNt~edid~l~~aL~~~~~ 404 (405)
T COG0520 376 DATIRASLHLYNTEEDVDRLLEALKKALA 404 (405)
T ss_pred CCceEEEEeecCCHHHHHHHHHHHHHHhh
Confidence 565 467899999999999998764
No 241
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.81 E-value=9.7e-18 Score=168.29 Aligned_cols=318 Identities=14% Similarity=0.065 Sum_probs=199.5
Q ss_pred cHHHHHHHHHHHHhcCCCC--CCCHHHHHHHHHHHhhCC-C-CCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCC
Q 011856 117 DDQVLAALGETMKKGTSFG--APCLLENVLAEMVISAVP-S-IEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYH 192 (476)
Q Consensus 117 ~p~v~~a~~~~l~~~~~~~--~~~~~~~~la~~l~~~~~-~-~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yh 192 (476)
+++|++++.+... .+. ...+...++++.+++++. . .+.+++++||+++++.++.. ...++++|++.+.+|+
T Consensus 21 ~~~V~~a~~~~~~---~~~~~~~~~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a~~~--~~~~Gd~Vlv~~~~~~ 95 (401)
T PLN02409 21 PERVLRAMNRPNE---DHRSPAFPALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESALTN--TLSPGDKVVSFRIGQF 95 (401)
T ss_pred CHHHHHHhcCCCC---CCCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHh--cCCCCCEEEEeCCCch
Confidence 5666666543221 111 123566778888888876 2 35689999999999999874 3456788999887776
Q ss_pred CCch-hHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCC-CCeEEEEEcccCCCCCcccCCHHHHH
Q 011856 193 GHAD-PFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK-GEIAAIILEPVVGNSGFIAPKPDFLN 270 (476)
Q Consensus 193 g~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~-~~~a~vi~ep~~~~~G~i~~~~~~l~ 270 (476)
+... ..+...|..+...+.+...+ -|++++++.+++.. +++++|++..+.+.+|.+.| ++
T Consensus 96 ~~~~~~~~~~~g~~v~~v~~~~~~~--------------~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~----~~ 157 (401)
T PLN02409 96 SLLWIDQMQRLNFDVDVVESPWGQG--------------ADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTND----LA 157 (401)
T ss_pred hHHHHHHHHHcCCceEEEECCCCCC--------------CCHHHHHHHHhhCcCCCccEEEEEeecccccccCC----HH
Confidence 6432 12222343332221111111 17899999998521 25788888888778999998 88
Q ss_pred HHHHH--HHHhCCEEEEeccccCccccccchhhccCCCCchh--hhhhhcCCCCcEEEEEecHHHHHhhcCCC--Cccc-
Q 011856 271 AIRRI--TKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLT--TLGKIIGGGLPVGAYGGRRDIMEMVAPAG--PMYQ- 343 (476)
Q Consensus 271 ~l~~l--~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pDi~--t~sK~lg~G~~iG~~~~~~~i~~~l~~~~--~~~~- 343 (476)
+|.++ |+++|+++|+|++|+ + |. ...+......|++ +.+|++++..++|+++.++++++.+.+.. +.+.
T Consensus 158 ~i~~l~~~~~~g~~~vvD~v~s-~--g~-~~id~~~~~~D~~~~s~~K~l~~P~G~G~l~~~~~~~~~~~~~~~~~~~~~ 233 (401)
T PLN02409 158 GVRKLLDCAQHPALLLVDGVSS-I--GA-LDFRMDEWGVDVALTGSQKALSLPTGLGIVCASPKALEASKTAKSPRVFFD 233 (401)
T ss_pred HHHHHHhhhccCcEEEEEcccc-c--CC-ccccccccCccEEEEcCccccCcCCCcceeEECHHHHHHHhcCCCCCeecC
Confidence 88888 999999999999995 2 11 0111112234655 56799986567999999999988875421 1110
Q ss_pred ---------cC---CCCCcHHHHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEE
Q 011856 344 ---------AG---TLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFF 408 (476)
Q Consensus 344 ---------~~---t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~ 408 (476)
.+ .++.|...+.+..++++.+.+ ++..++.+++.+++++.|+++..+...+..-...+.+.++.+
T Consensus 234 ~~~~~~~~~~g~~~~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~g~~~~~~~~~~~s~~v~~~~~ 313 (401)
T PLN02409 234 WADYLKFYKLGTYWPYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAWGLKLCTKKPEWRSDTVTAVVV 313 (401)
T ss_pred HHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCeeccCChhhcccceEEEeC
Confidence 11 234556677778888887654 566677778888888887765221111100011223334433
Q ss_pred ecCCCcCchhhcccchHHHHHHHHHHH-HCCeEeccCC----CcceEEe--CCCcHHHHHHHHHHHHHHHHHh
Q 011856 409 TEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQ----FEAGFTS--LAHSSDDIQHTITAAEKVKMRF 474 (476)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~----~~~~~~~--~~~t~e~i~~~~~~l~~~~~~~ 474 (476)
.. .....++.+.|. ++|+.+..+. ...+|++ ..++++|+..++++|++++.++
T Consensus 314 p~-------------~~~~~~l~~~l~~~~~i~i~~G~~~~~~~~~Rig~~g~~~~~~~~~~~~~~~~~l~~~ 373 (401)
T PLN02409 314 PE-------------GIDSAEIVKNAWKKYNLSLGLGLNKVAGKVFRIGHLGNVNELQLLGALAGVEMVLKDV 373 (401)
T ss_pred CC-------------CCCHHHHHHHHHHhCCEEEEcCCCcccCCEEEEcCCCCCCHHHHHHHHHHHHHHHHHc
Confidence 21 111245666665 6699998763 2346773 4569999999999999998763
No 242
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.81 E-value=2.5e-17 Score=166.92 Aligned_cols=327 Identities=16% Similarity=0.127 Sum_probs=201.9
Q ss_pred CEEEecccChhhccCCCCcHHHHHHHHHHHHhcC-C-CCCC-------CHHHHHHHHHHHhhCCC--CCeEEEeCCHHHH
Q 011856 99 NEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT-S-FGAP-------CLLENVLAEMVISAVPS--IEMVRFVNSGTEA 167 (476)
Q Consensus 99 ~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~-~-~~~~-------~~~~~~la~~l~~~~~~--~e~v~~~~sGseA 167 (476)
..|+|..+. |..++.|.+++.+.+.... . .... .+...++.+.+++++.. .++|+|++|++++
T Consensus 33 ~iyLd~a~~------~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~a 106 (424)
T PLN02855 33 LVYLDNAAT------SQKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFINASTSREIVFTRNATEA 106 (424)
T ss_pred eEEeeCccc------cCCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCHHHH
Confidence 356775332 4467889999988776521 1 1111 12245777888888862 4799999999999
Q ss_pred HHHHHHHH-H-hccCCceEEEEeCCCCCCchhHH---hhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhc
Q 011856 168 CMGVLRLA-R-AFTGRERIIKFEGCYHGHADPFL---VKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFEN 242 (476)
Q Consensus 168 ~~~al~~a-r-~~~~~~~ii~~~~~yhg~~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~ 242 (476)
+..+++.. . ...+++.|++.+..|++...... ...|..+...+...... .|++++++.++.
T Consensus 107 l~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~~~~~--------------~~~~~l~~~i~~ 172 (424)
T PLN02855 107 INLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLTPDEV--------------LDVEQLKELLSE 172 (424)
T ss_pred HHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEecCCCCC--------------cCHHHHHHHhcc
Confidence 99988742 1 23456778877776665433222 22233222211110001 178999998863
Q ss_pred CCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-CccccccchhhccCCCCchh--hhhhhcCCC
Q 011856 243 NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GFRLAYGGAQEYFGVTPDLT--TLGKIIGGG 319 (476)
Q Consensus 243 ~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~r~g~~~~~~~~g~~pDi~--t~sK~lg~G 319 (476)
++++|++..+++.+|.+.| +++|.++|+++|+++|+|++|. |.. ..... ...+|++ ++.|.+| .
T Consensus 173 ---~t~lv~i~~~~n~tG~~~~----~~~I~~l~~~~g~~vivD~a~~~g~~---~~~~~--~~~~d~~~~s~~K~~g-p 239 (424)
T PLN02855 173 ---KTKLVATHHVSNVLGSILP----VEDIVHWAHAVGAKVLVDACQSVPHM---PVDVQ--TLGADFLVASSHKMCG-P 239 (424)
T ss_pred ---CceEEEEeCccccccccCC----HHHHHHHHHHcCCEEEEEhhhhcCCc---CCCch--hcCCCEEEeecccccC-C
Confidence 6788888888888999999 8999999999999999999994 211 11111 2235766 5789554 2
Q ss_pred CcEEEEEecHHHHHhhcCCC---Cc----------c-----ccCCCCCcHHHHHHHHHHHHHhcC---CCHHHHHHHHHH
Q 011856 320 LPVGAYGGRRDIMEMVAPAG---PM----------Y-----QAGTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITG 378 (476)
Q Consensus 320 ~~iG~~~~~~~i~~~l~~~~---~~----------~-----~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~ 378 (476)
-.+|++++++++++.+.+.. .. + .+...+.+..+.++..++++.+.+ +...++..++.+
T Consensus 240 ~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~ 319 (424)
T PLN02855 240 TGIGFLWGKSDLLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEVELGT 319 (424)
T ss_pred CccEEEEEchhhhhcCCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 24899999999887765310 00 0 001112455566666677876654 455566666777
Q ss_pred HHHHHHHHHhhhcCCceE----eeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHC-CeEeccCC--------
Q 011856 379 ELTQGIIDAGKKAGHAIC----GGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEE-GVYFAPSQ-------- 445 (476)
Q Consensus 379 ~l~~~L~~~~~~~~~~~~----v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~~-------- 445 (476)
++++.|+++. ...+... ....+.++.+.+... ...++.+.|.++ ||.++.+.
T Consensus 320 ~l~~~L~~~~-g~~i~~~~~~~~~~r~~~v~~~~~~~--------------~~~~v~~~L~~~~gI~v~~g~~c~~~~~~ 384 (424)
T PLN02855 320 YLYEKLSSVP-GVRIYGPKPSEGVGRAALCAFNVEGI--------------HPTDLSTFLDQQHGVAIRSGHHCAQPLHR 384 (424)
T ss_pred HHHHHHhcCC-CEEEeCCCcccccCcccEEEEEECCc--------------CHHHHHHHhcccCCEEEechhhhhHHHHH
Confidence 7777665531 1111100 112244555555211 124677888777 99987543
Q ss_pred ----CcceEEe--CCCcHHHHHHHHHHHHHHHHH
Q 011856 446 ----FEAGFTS--LAHSSDDIQHTITAAEKVKMR 473 (476)
Q Consensus 446 ----~~~~~~~--~~~t~e~i~~~~~~l~~~~~~ 473 (476)
...+|++ ...|++|++++++.|++++..
T Consensus 385 ~~g~~~~iRiS~~~ynt~~di~~l~~~l~~~~~~ 418 (424)
T PLN02855 385 YLGVNASARASLYFYNTKEEVDAFIHALKDTIAF 418 (424)
T ss_pred HhCCCCeEEEEeccCCCHHHHHHHHHHHHHHHHH
Confidence 1246665 567999999999999998865
No 243
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.81 E-value=1.2e-17 Score=166.62 Aligned_cols=351 Identities=15% Similarity=0.053 Sum_probs=193.1
Q ss_pred cCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHH
Q 011856 96 IDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLA 175 (476)
Q Consensus 96 ~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~~~~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~a 175 (476)
.-|..||||.+-.++ ..+.++..+++..+...+.......+|.+.+++++ +.+.+++++||++|+..+++
T Consensus 17 ~~~~v~iDlltds~t-------~ams~~~~~a~~~gd~~Y~~~~g~~~Leeaia~~~-g~~~vv~t~~Gt~Al~la~~-- 86 (431)
T cd00617 17 RSEDVYIDLLTDSGT-------GAMSDYQWAAMMLGDEAYAGSKSFYDLEDAVQDLF-GFKHIIPTHQGRGAENILFS-- 86 (431)
T ss_pred CCCCcCCCCCCCCCc-------HHHHHHHHHHHHhCCCccCCCCCHHHHHHHHHHHH-CCCeEEEcCCHHHHHHHHHH--
Confidence 346678898876433 45666666666654333334444567777777777 77899999999999999998
Q ss_pred HhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCC-CHHHHHHHHhcC-CCCeEEEEEc
Q 011856 176 RAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFN-DVSALENLFENN-KGEIAAIILE 253 (476)
Q Consensus 176 r~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~~~le~~l~~~-~~~~a~vi~e 253 (476)
++.+++++|..++.|..+ .......|..+...+....... .....+.+| |+++|++.+++. .+.+++|+++
T Consensus 87 -al~~pGD~V~~~~~f~~~-~~~i~~~Ga~pv~v~i~~~~~~-----~~~~pf~gniD~e~Le~~I~~~~~~~~~~I~v~ 159 (431)
T cd00617 87 -ILLKPGRTVPSNMHFDTT-RGHIEANGAVPVDLVIDEAHDA-----QELIPFKGNIDVAKLEKLIDEVGAENIPYIVLT 159 (431)
T ss_pred -HhCCCCCEEccCCcccch-HHHHHhCCCEeEEEeccccccc-----ccccCCCCCcCHHHHHHHhCcccCCCccEEEEE
Confidence 444555555544445443 3344444543332221100000 000001111 899999999854 2347777776
Q ss_pred ccCC-CCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-C---c---cccccchhhccCCCCchhhhhhhcC-CCCc---
Q 011856 254 PVVG-NSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-G---F---RLAYGGAQEYFGVTPDLTTLGKIIG-GGLP--- 321 (476)
Q Consensus 254 p~~~-~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~-g---~---r~g~~~~~~~~g~~pDi~t~sK~lg-~G~~--- 321 (476)
..+| .+|...+ .+.+++|.++|++||++||.|+++. + | |.+.........+...+.++||++. +|++
T Consensus 160 ~p~N~~gG~~~s-~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~ei~~e~~s~sd~~~mS~~K~~~ 238 (431)
T cd00617 160 ITNNTAGGQPVS-MANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIAEIAREMFSYADGCTMSAKKDGL 238 (431)
T ss_pred CCcCCCCCccCC-HHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHHHHHHHhhccCCEEEEEeecCCC
Confidence 4444 4576654 5559999999999999999999974 1 1 1110000000001112234666665 4554
Q ss_pred ---EEEEEecH-HHHHhhcCCCC-ccccCCCCCcHHHHHHHHH-HHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCce
Q 011856 322 ---VGAYGGRR-DIMEMVAPAGP-MYQAGTLSGNPLAMTAGIH-TLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAI 395 (476)
Q Consensus 322 ---iG~~~~~~-~i~~~l~~~~~-~~~~~t~~~~~~~~aaa~a-al~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 395 (476)
.|++++++ ++++.++.... .....++++....+.++++ +|+...+.+..++..++.+++.+.|.+. +++.
T Consensus 239 ~~~GG~i~~~d~~l~~~~~~~~~~~~~~~~~gG~~~r~~~A~A~gL~e~~~~~~l~~~~~~r~~l~~~L~~~----G~~v 314 (431)
T cd00617 239 VNIGGFLALRDDELYEEARQRVVLYEGFVTYGGMAGRDMEALAQGLREAVEEDYLRHRVEQVRYLGDRLDEA----GVPI 314 (431)
T ss_pred CccceEEEeCcHHHHHHHHHhccccCCccccccccHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHC----CCCc
Confidence 55778876 58887763211 1112233332222333333 5654322333444444557777777765 4444
Q ss_pred EeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHH-HHCCeEeccCC-----------------CcceEEe---CC
Q 011856 396 CGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGM-LEEGVYFAPSQ-----------------FEAGFTS---LA 454 (476)
Q Consensus 396 ~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~~~~~~-----------------~~~~~~~---~~ 454 (476)
..+..|.+++++...- .+...++.....+|+..| .+.||.+...+ .+.+|+. -.
T Consensus 315 ~~P~Ggh~v~~d~~~~-----~~~~~~~~~~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~~~~~~~~~~~rl~~prr~ 389 (431)
T cd00617 315 VEPAGGHAVFIDAREF-----LPHIPQEQFPAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYPELELVRLAIPRRV 389 (431)
T ss_pred cCCCcceEEEEEhHHh-----cCCCCcccCcHHHHHHHHHHHcCeeEEeecceecccCCCCCcccCCccceeEEeccccc
Confidence 4455666677665421 000000111235666444 46678754311 1234552 36
Q ss_pred CcHHHHHHHHHHHHHHHHH
Q 011856 455 HSSDDIQHTITAAEKVKMR 473 (476)
Q Consensus 455 ~t~e~i~~~~~~l~~~~~~ 473 (476)
.|.+++|.+.+++.++++.
T Consensus 390 ~t~~~~~~~~~~~~~~~~~ 408 (431)
T cd00617 390 YTQDHMDYVAAAVIALYER 408 (431)
T ss_pred cCHHHHHHHHHHHHHHHhh
Confidence 6999999999999988764
No 244
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.80 E-value=4.9e-17 Score=163.85 Aligned_cols=326 Identities=15% Similarity=0.135 Sum_probs=184.2
Q ss_pred CEEEecccChhhccCCCCcHHHHHHHHHHHH-h-c--C---CCCCCCH----HHHHHHHHHHhhCCCCCeEEEeCCHHHH
Q 011856 99 NEYIDYVGSWGPAIIGHADDQVLAALGETMK-K-G--T---SFGAPCL----LENVLAEMVISAVPSIEMVRFVNSGTEA 167 (476)
Q Consensus 99 ~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~-~-~--~---~~~~~~~----~~~~la~~l~~~~~~~e~v~~~~sGseA 167 (476)
++.|++..+- ++ -+|.|++++.+.+. + + . .+....+ ++...++.++++++.....++.+||++|
T Consensus 19 ~~~~~~~~~~--~~---~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~v~~~sgt~a 93 (402)
T cd00378 19 RETLELIASE--NF---TSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAEYANVQPHSGSQA 93 (402)
T ss_pred HhCeeeeccC--Cc---CCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCCceeeecCCcHHH
Confidence 3456665442 33 38999999987653 2 1 0 1111122 2222444566777522222444579999
Q ss_pred HHHHHHHHHhccCCceEEEEeCCCCCCchhH----HhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcC
Q 011856 168 CMGVLRLARAFTGRERIIKFEGCYHGHADPF----LVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN 243 (476)
Q Consensus 168 ~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~ 243 (476)
+..+++.. ...+++|++.++.|.+..... +...|..+....++.... . ..-|++++++.+.+.
T Consensus 94 ~~~~l~~l--~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--------~---~~id~~~l~~~i~~~ 160 (402)
T cd00378 94 NLAVYFAL--LEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPE--------T---GLIDYDALEKMALEF 160 (402)
T ss_pred HHHHHHHh--cCCCCEEEEecCccCccccccccccccccceeEEEecCCcCcc--------c---CCcCHHHHHHHHHhC
Confidence 99999853 345677888887776543211 111222111111110000 0 001899999998643
Q ss_pred CCCeEEEEE-cccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccc-cCc-cccccchhhccCCCCchh--hhhhhcCC
Q 011856 244 KGEIAAIIL-EPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM-TGF-RLAYGGAQEYFGVTPDLT--TLGKIIGG 318 (476)
Q Consensus 244 ~~~~a~vi~-ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~-~g~-r~g~~~~~~~~g~~pDi~--t~sK~lg~ 318 (476)
+++++++ +|.+ |...+ +++|.++|++||+++|+||+| .|+ ..|... ..+. ..|++ +++|++ +
T Consensus 161 --~~~~v~~~~~~~---~~~~~----~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~--~~~~-~~dv~~~s~sK~l-~ 227 (402)
T cd00378 161 --KPKLIVAGASAY---PRPID----FKRFREIADEVGAYLLVDMAHVAGLVAGGVFP--NPLP-GADVVTTTTHKTL-R 227 (402)
T ss_pred --CCCEEEecCccc---CCCcC----HHHHHHHHHhcCCEEEEEccchhhhhhcccCC--Cccc-CCcEEEeccccCC-C
Confidence 3455555 4433 34445 899999999999999999997 665 333211 1112 34654 689999 6
Q ss_pred CCcEEEEEecH-HHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHh-c-C-CCHHHHHHHHHHHHHHHHHHHhhhcCCc
Q 011856 319 GLPVGAYGGRR-DIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRL-K-E-PGTYEYLNKITGELTQGIIDAGKKAGHA 394 (476)
Q Consensus 319 G~~iG~~~~~~-~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~-~-~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 394 (476)
|+|+|++++++ ++++.+.........++ .++..++++..++... . . ++..++++++.+++.+.|.+. ++.
T Consensus 228 G~~gg~i~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----g~~ 301 (402)
T cd00378 228 GPRGGLILTRKGELAKKINSAVFPGLQGG--PHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEALKER----GFK 301 (402)
T ss_pred CCCceEEEeccHHHHHHHHHHhCccccCC--chHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhC----CCe
Confidence 78999998877 88887753211111111 1222333333334333 2 1 456677788888888888764 222
Q ss_pred eE-eeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCC----------CcceEEeC------CCcH
Q 011856 395 IC-GGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ----------FEAGFTSL------AHSS 457 (476)
Q Consensus 395 ~~-v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~----------~~~~~~~~------~~t~ 457 (476)
.. ....+.++++.+..... ....+.+.|.++||.+.+.. ...+|++. .+++
T Consensus 302 ~~~~~~~~~~v~v~~~~~~~------------~~~~~~~~l~~~gI~v~~~~~p~~~~~~~~~~~lRi~~~~~~~~~~~~ 369 (402)
T cd00378 302 VVSGGTDNHLVLVDLRPKGI------------TGKAAEDALEEAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMGE 369 (402)
T ss_pred EeecCCCCeEEEEeCCccCC------------CHHHHHHHHHHcCcEEcCCcCCCCCCCCCCCCeeEecCHHHHHhCCCH
Confidence 11 12346677777642110 11355667788899997431 23466632 4579
Q ss_pred HHHHHHHHHHHHHHHH
Q 011856 458 DDIQHTITAAEKVKMR 473 (476)
Q Consensus 458 e~i~~~~~~l~~~~~~ 473 (476)
+|++++++.|++++.+
T Consensus 370 ~di~~~~~~l~~~~~~ 385 (402)
T cd00378 370 EEMEEIADFIARALKD 385 (402)
T ss_pred HHHHHHHHHHHHHHhc
Confidence 9999999999997753
No 245
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.80 E-value=3e-18 Score=170.07 Aligned_cols=238 Identities=19% Similarity=0.155 Sum_probs=163.1
Q ss_pred CCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCC
Q 011856 136 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 215 (476)
Q Consensus 136 ~~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~ 215 (476)
+.++...+|.++++++. +.+.+++++||++|+..+++.. ...++.|++....|++..........
T Consensus 37 ~~~p~~~~le~~la~l~-g~~~a~~~~sG~~Ai~~~l~~l--~~~gd~Vl~~~~~y~~~~~~~~~~~~------------ 101 (369)
T cd00614 37 IGNPTVDALEKKLAALE-GGEAALAFSSGMAAISTVLLAL--LKAGDHVVASDDLYGGTYRLFERLLP------------ 101 (369)
T ss_pred CCChhHHHHHHHHHHHH-CCCCEEEEcCHHHHHHHHHHHH--cCCCCEEEECCCCcchHHHHHHHHHh------------
Confidence 35677788889998888 5578889999999999999842 34566777777777774322211100
Q ss_pred CCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccc
Q 011856 216 GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLA 295 (476)
Q Consensus 216 ~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g 295 (476)
..+..+..++.+|++++++.+++ ++++|++|+++|+.|.+.+ +++|.++|++||++||+|++|.....
T Consensus 102 ----~~g~~~~~v~~~d~~~l~~~i~~---~~~~v~~e~~~np~g~~~d----l~~i~~la~~~g~~livD~t~~~~~~- 169 (369)
T cd00614 102 ----KLGIEVTFVDPDDPEALEAAIKP---ETKLVYVESPTNPTLKVVD----IEAIAELAHEHGALLVVDNTFATPYL- 169 (369)
T ss_pred ----hcCeEEEEeCCCCHHHHHHhcCC---CCeEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEECCCcchhc-
Confidence 01123556677789999998863 6789999999999999998 99999999999999999999952211
Q ss_pred ccchhhccCCCCchh--hhhhhcCC-C-CcEEEEEecH-HHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHH
Q 011856 296 YGGAQEYFGVTPDLT--TLGKIIGG-G-LPVGAYGGRR-DIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTY 370 (476)
Q Consensus 296 ~~~~~~~~g~~pDi~--t~sK~lg~-G-~~iG~~~~~~-~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~ 370 (476)
...+....|++ +++|.+++ | .++|++++++ ++++.++... .......+|..+.+++..|+.+ +...
T Consensus 170 ----~~~~~~g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~~~l~~~~---~~~g~~~~p~~a~~~l~~l~tl--~~r~ 240 (369)
T cd00614 170 ----QRPLELGADIVVHSATKYIGGHSDVIAGVVVGSGEALIQRLRFLR---LALGTILSPFDAWLLLRGLKTL--PLRM 240 (369)
T ss_pred ----CChhhhCCcEEEeccceeccCCCCceEEEEEeCcHHHHHHHHHHH---HhhCCCCCHHHHHHHHcCCCCH--HHHH
Confidence 11122345766 78999985 4 7899999987 8887776321 1123356777777665555422 3456
Q ss_pred HHHHHHHHHHHHHHHHHhhh----cCC-ce---------EeeeeceeEEEEEe
Q 011856 371 EYLNKITGELTQGIIDAGKK----AGH-AI---------CGGYISGMFGFFFT 409 (476)
Q Consensus 371 ~~~~~~~~~l~~~L~~~~~~----~~~-~~---------~v~~~g~~~~i~~~ 409 (476)
++..++..++.+.|++...- +|. .. ...+.|.++.+++.
T Consensus 241 ~~~~~na~~la~~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~ 293 (369)
T cd00614 241 ERHSENALKVAEFLEKHPKVERVYYPGLPSHPQHELAKKQMSGYGGVFSFELK 293 (369)
T ss_pred HHHHHHHHHHHHHHHcCCCccEEECCCCCCCchHHHHHHhcCCCceEEEEEeC
Confidence 77788888888888764210 110 00 12356889999885
No 246
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.80 E-value=6.4e-18 Score=151.95 Aligned_cols=327 Identities=17% Similarity=0.167 Sum_probs=204.4
Q ss_pred EEecccChhhccCCCCcHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccC
Q 011856 101 YIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTG 180 (476)
Q Consensus 101 ~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~~~~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~ 180 (476)
.+|+-+- .+--+..++++++.++.-...-|+ .++...+|.+..++.+ +.|..+|++|||.+|..+++. ....
T Consensus 23 ~vDLRSD----TvT~PTdeMr~am~eA~vgDdVyG-eD~tt~rLE~~vA~l~-GKEAgLFv~SGTmgNllaIm~--Hc~~ 94 (384)
T KOG1368|consen 23 SVDLRSD----TVTVPTDEMRRAMAEASVGDDVYG-EDPTTNRLEQRVAELF-GKEAGLFVPSGTMGNLLAIMV--HCHQ 94 (384)
T ss_pred ccccccc----cccCChHHHHHHHhhcccCccccc-CCccHHHHHHHHHHHh-CccceeeecccccccHHHHHH--HhcC
Confidence 3455553 333456788888888754433343 4455567777777777 889999999999999999995 3333
Q ss_pred C-ceEEEEeC-CCCCCchhHHhh-cCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhc-----CCCCeEEEEE
Q 011856 181 R-ERIIKFEG-CYHGHADPFLVK-AGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFEN-----NKGEIAAIIL 252 (476)
Q Consensus 181 ~-~~ii~~~~-~yhg~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~-----~~~~~a~vi~ 252 (476)
+ ..||+-+. ..|-|-.+.+.. +|..+..+ .+...+ +-|++++|+.+.. |.+.+++|.+
T Consensus 95 rg~eii~gd~~HI~~~E~gg~s~l~gv~~~tv-~~e~dg-------------tm~ledIe~~ir~~~GD~H~p~T~LIcl 160 (384)
T KOG1368|consen 95 RGSEIIVGDRAHIHRYEQGGISQLAGVHVRTV-KNENDG-------------TMDLEDIEAAIRVPKGDCHMPPTKLICL 160 (384)
T ss_pred CCceEEeccchheeehhccChhhhccceeEee-eeCCCC-------------eeeHHHHHHhhcCCCCCccCCCceEEEe
Confidence 3 34444322 233332222221 11111100 011111 1169999999973 2346789999
Q ss_pred cccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc--cccccchhhccCCCCch--hhhhhhcCCCCcEEEE-Ee
Q 011856 253 EPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF--RLAYGGAQEYFGVTPDL--TTLGKIIGGGLPVGAY-GG 327 (476)
Q Consensus 253 ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~--r~g~~~~~~~~g~~pDi--~t~sK~lg~G~~iG~~-~~ 327 (476)
|..+++.|....|-+|+.++.+||++||+.|.+|-+.. | -....-....+.-..|- +||||++|+ |+|-+ ++
T Consensus 161 ENT~~~~Gg~vlPle~~~~v~~lak~~glkLH~DGARi-~NAavasgV~vk~i~~~fDSVsiCLSKglgA--PVGSViVG 237 (384)
T KOG1368|consen 161 ENTHNNCGGKVLPLEELDRVKALAKRHGLKLHMDGARI-FNAAVASGVPVKKICSAFDSVSICLSKGLGA--PVGSVIVG 237 (384)
T ss_pred eccccccCceEeeHHHHHHHHHHHhccCCeeecchhhh-hhHHHHcCCCHHHHHHhhhhhhhhhhccCCC--CcccEEEc
Confidence 99988866566677889999999999999999997653 1 00011111222222343 489999987 88877 88
Q ss_pred cHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCceEee-eeceeEEE
Q 011856 328 RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGG-YISGMFGF 406 (476)
Q Consensus 328 ~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~-~~g~~~~i 406 (476)
++++++..+..++. .++.+-.+-+.++||+.+|+. .-..+.+-.++...+.+.++... .+..+++ -...|..+
T Consensus 238 ~k~FI~kA~~~RKa-lGGGmRQsGvLaaaaLval~~--~~~~L~~dHk~A~~lAe~~~~~~---~i~v~v~a~etNiv~~ 311 (384)
T KOG1368|consen 238 SKDFIDKARHFRKA-LGGGMRQSGVLAAAALVALDE--NVPLLRADHKRAKELAEYINTPE---EIRVEVPAVETNIVNM 311 (384)
T ss_pred cHHHHHHHHHHHHH-hcCchhHHHHHHHHHHHHhhc--chHHHHHHHHHHHHHHHHhcccc---ceeeecchhhcceeee
Confidence 99998765422122 334445566777788877762 22355555666666666666321 1444454 45667777
Q ss_pred EEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCCcceEE--eCCCcHHHHHHHHHHHHHH
Q 011856 407 FFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAEKV 470 (476)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~--~~~~t~e~i~~~~~~l~~~ 470 (476)
.+..... ..+++.+.+.++||++.++.....|+ ....|+++++.++..|.+.
T Consensus 312 ~l~q~~~------------~~~~l~~~~~k~gi~lm~~~s~r~Rivlh~Qvt~~~ve~~~~~~~k~ 365 (384)
T KOG1368|consen 312 VLCQARL------------TAEELCKFLEKNGILLMGGASRRIRIVLHHQVTDEDVEYVKSVLSKK 365 (384)
T ss_pred ecccccC------------CHHHHHHHHHHCCeEEeeccccceEEEEEEecCHHHHHHHHHHHHHH
Confidence 7654322 23688899999999988775444555 5677999999999999543
No 247
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.80 E-value=5e-17 Score=164.43 Aligned_cols=325 Identities=15% Similarity=0.101 Sum_probs=183.7
Q ss_pred CEEEecccChhhccCCCCcHHHHHHHHHHHHhc--CCCC---C--CCHHHHHH----HHHHHhhCCC-CCeEEEeCCHHH
Q 011856 99 NEYIDYVGSWGPAIIGHADDQVLAALGETMKKG--TSFG---A--PCLLENVL----AEMVISAVPS-IEMVRFVNSGTE 166 (476)
Q Consensus 99 ~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~--~~~~---~--~~~~~~~l----a~~l~~~~~~-~e~v~~~~sGse 166 (476)
+.+|++.++- ++ -+|+|.+++.+.+... .... + ..+...++ .+.++++++. ...+ +++||++
T Consensus 25 ~~~~~l~~~~--n~---~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~~i-~~~sgt~ 98 (416)
T PRK00011 25 EEHIELIASE--NF---VSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGAEYANV-QPHSGSQ 98 (416)
T ss_pred hcCeeeeccc--Cc---CCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCCCceee-ecCCchH
Confidence 4557777663 22 4899999987765321 1111 0 11222233 3367777752 3334 4457899
Q ss_pred HHHHHHHHHHhccCCceEEEEeCCCCCCchhH--HhhcC--CCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhc
Q 011856 167 ACMGVLRLARAFTGRERIIKFEGCYHGHADPF--LVKAG--SGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFEN 242 (476)
Q Consensus 167 A~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~--~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~ 242 (476)
|+..+++.. ..+++.|++....|.+..... ....+ ..+... +.... . -..|++++++.+++
T Consensus 99 al~~~l~~l--~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~--~~~~~--------~---~~~d~~~l~~~i~~ 163 (416)
T PRK00011 99 ANAAVYFAL--LKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSY--GVDEE--------T---GLIDYDEVEKLALE 163 (416)
T ss_pred HHHHHHHHh--cCCCCEEEEeccccCCccccccccccccceeeEeec--CcCcc--------c---CCcCHHHHHHHHHh
Confidence 999988842 345667887777765432111 11111 111110 10000 0 01279999999975
Q ss_pred CCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccc-cCc-cccccchhhccCCCCchh--hhhhhcCC
Q 011856 243 NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM-TGF-RLAYGGAQEYFGVTPDLT--TLGKIIGG 318 (476)
Q Consensus 243 ~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~-~g~-r~g~~~~~~~~g~~pDi~--t~sK~lg~ 318 (476)
+ ++++|++.. ++.|...+ +++|.++|++||+++|+||+| .|+ ..|.. ....+ ..|++ +++|++ +
T Consensus 164 ~--~~k~v~~~~--~~~~~~~~----~~~I~~la~~~~~~livD~a~~~g~~~~g~~--~~~~~-~~di~~~S~~K~l-~ 231 (416)
T PRK00011 164 H--KPKLIIAGA--SAYSRPID----FKRFREIADEVGAYLMVDMAHIAGLVAAGVH--PSPVP-HADVVTTTTHKTL-R 231 (416)
T ss_pred c--CCCEEEECC--CcCCCccC----HHHHHHHHHHcCCEEEEECcchhcccccCcc--CCCCC-CCcEEEecCCcCC-C
Confidence 3 455666642 22344455 899999999999999999998 454 32211 11122 34655 689998 4
Q ss_pred CCcEEEEEec-HHHHHhhcCCCCccccCCCCCcHHHHHHH-HHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHhhhcCCc
Q 011856 319 GLPVGAYGGR-RDIMEMVAPAGPMYQAGTLSGNPLAMTAG-IHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHA 394 (476)
Q Consensus 319 G~~iG~~~~~-~~i~~~l~~~~~~~~~~t~~~~~~~~aaa-~aal~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 394 (476)
|+++|+++++ +++++.++........++ .....+++. .+.++.+++ ++..++++++.+++++.|++++ ..+.
T Consensus 232 g~~gg~i~~~~~~~~~~l~~~~~~~~~~~--~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g--~~~~ 307 (416)
T PRK00011 232 GPRGGLILTNDEELAKKINSAVFPGIQGG--PLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAERG--FRVV 307 (416)
T ss_pred CCCceEEEeCCHHHHHHHHHHhCccccCC--ccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCC--Ceee
Confidence 6889999885 688887753211111111 122233333 333343332 5567888888899998888742 1111
Q ss_pred eEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCC----------CcceEEe------CCCcHH
Q 011856 395 ICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ----------FEAGFTS------LAHSSD 458 (476)
Q Consensus 395 ~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~----------~~~~~~~------~~~t~e 458 (476)
. -.....++++.+.+.. ....++.+.|.++||.+.... ...+|+. ..+|++
T Consensus 308 ~-~~~~~~~~~i~~~~~~------------~~~~~~~~~L~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~~ 374 (416)
T PRK00011 308 S-GGTDNHLVLVDLRSKG------------LTGKEAEAALEEANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKEA 374 (416)
T ss_pred e-cCCCCeEEEEeCcccC------------CCHHHHHHHHHHcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCHH
Confidence 0 0123356666653210 012467788889999987321 1235653 256899
Q ss_pred HHHHHHHHHHHHHHH
Q 011856 459 DIQHTITAAEKVKMR 473 (476)
Q Consensus 459 ~i~~~~~~l~~~~~~ 473 (476)
|++++++.|++++..
T Consensus 375 di~~l~~~l~~~~~~ 389 (416)
T PRK00011 375 EMKEIAELIADVLDN 389 (416)
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999987653
No 248
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.80 E-value=3.9e-17 Score=153.15 Aligned_cols=306 Identities=14% Similarity=0.104 Sum_probs=191.6
Q ss_pred CCHHHHHHHHHHHhhCC-----CCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCC
Q 011856 137 PCLLENVLAEMVISAVP-----SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGL 211 (476)
Q Consensus 137 ~~~~~~~la~~l~~~~~-----~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~ 211 (476)
....++++|+.+.+.-. +++++.++++++.|+++.+-. ...+++..++..+-|-|+....---+|..+.++..
T Consensus 123 l~~frqa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fc--LadpgdafLvPtPyY~gfdrdl~~rTgveivpv~c 200 (471)
T KOG0256|consen 123 LPSFRQAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFC--LADPGDAFLVPTPYYPGFDRDLRWRTGVEIVPVHC 200 (471)
T ss_pred chHHHHHHHHHHHHHhCCCCccCccceEEecccchhhHHHHHH--hcCCCceeeecCCCCCcccccceeccCceEEEEEe
Confidence 45666677777665542 588999999999999988763 23456677777777777543333333333222211
Q ss_pred CCCCCCCCCCCCceeeccCCCHHHHHHHHhc---CCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEecc
Q 011856 212 PDSPGVPKGATYETLTAPFNDVSALENLFEN---NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEV 288 (476)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~---~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv 288 (476)
....++ . -+.++||+++.+ .+.+++.||+...+|+-|.+.++++ |..+.+++.++++.||+||+
T Consensus 201 ~Ss~~f---------~---itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~-L~~ll~Fa~~kniHvI~DEI 267 (471)
T KOG0256|consen 201 SSSNGF---------Q---ITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEE-LISLLNFASRKNIHVISDEI 267 (471)
T ss_pred ecCCCc---------c---ccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHH-HHHHHHHHhhcceEEEeehh
Confidence 111111 0 058888888754 2346776666555566677776666 99999999999999999999
Q ss_pred ccCc-cccccc--hhhc---cCCCCchh----hhhhhcC-CCCcEEEEEe-cHHHHHhhcCCCCccccCCCCCcHHHHHH
Q 011856 289 MTGF-RLAYGG--AQEY---FGVTPDLT----TLGKIIG-GGLPVGAYGG-RRDIMEMVAPAGPMYQAGTLSGNPLAMTA 356 (476)
Q Consensus 289 ~~g~-r~g~~~--~~~~---~g~~pDi~----t~sK~lg-~G~~iG~~~~-~~~i~~~l~~~~~~~~~~t~~~~~~~~aa 356 (476)
|+|- .....| ..+. ....||-+ ++||-|| .|+|+|.+.. ++++.....+ +..++ ..++..+.-
T Consensus 268 ya~sVF~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~ne~VvsaA~k---mssf~--~vSs~tQ~~ 342 (471)
T KOG0256|consen 268 YAGSVFDKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNEDVVSAATK---MSSFG--LVSSQTQYL 342 (471)
T ss_pred hcccccCccCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecChHHHHHHHH---Hhhcc--CCcHHHHHH
Confidence 9754 222111 1121 11245533 7999999 8999999955 6677776653 22222 345566655
Q ss_pred HHHHHHH---hcC--CCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHH
Q 011856 357 GIHTLKR---LKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFY 431 (476)
Q Consensus 357 a~aal~~---~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (476)
....|.. .+. ++..++++.+.+++.++|+++ +++.--.+.|+|+|+++..--. .. ..+.-.+++
T Consensus 343 la~LLSD~~f~~~yl~en~~Rl~~rh~~~~~gLk~l----gI~cl~s~AGlF~wvDlr~lL~-----s~--tfe~El~Lw 411 (471)
T KOG0256|consen 343 LASLLSDEEFTREYLRENNKRLRIRHRYIVEGLKAL----GIPCLKSNAGLFCWVDLRKLLT-----SL--TFEGELELW 411 (471)
T ss_pred HHHHhchHHHHHHHHHHHHHHHHHHHHHHHhhHHhc----CCceeecCCeeEEEEEhHHhcC-----cC--ChHHHHHHH
Confidence 5444431 111 344566666667777777765 5555567889999999854110 00 112224567
Q ss_pred HHHHHC-CeEeccCC------CcceEEeCCCcHHH-HHHHHHHHHHHHHH
Q 011856 432 RGMLEE-GVYFAPSQ------FEAGFTSLAHSSDD-IQHTITAAEKVKMR 473 (476)
Q Consensus 432 ~~l~~~-Gv~~~~~~------~~~~~~~~~~t~e~-i~~~~~~l~~~~~~ 473 (476)
+.++++ ++.+.|+. ++.+|++++...++ ++-++++|+..+..
T Consensus 412 ~~i~~~vklnlSpG~s~~C~EpGWFRvcFAn~~~~t~~~am~Ri~~~~~~ 461 (471)
T KOG0256|consen 412 ERILDNVKLNLSPGSSCHCHEPGWFRVCFANMSEETLEVAMRRLKQFLDS 461 (471)
T ss_pred HHHHHhhccccCCCCcceecCCCeEEEEeccCCHHHHHHHHHHHHHHHHh
Confidence 777777 99999985 33567776665555 45499999988764
No 249
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.79 E-value=9e-17 Score=161.55 Aligned_cols=308 Identities=13% Similarity=0.087 Sum_probs=180.0
Q ss_pred cHHHHHHHHHHH-Hh-cCCCCC-----CCHHHHHHHH----HHHhhCCCCCeE-EEeCCHHHHHHHHHHHHHhccC-Cce
Q 011856 117 DDQVLAALGETM-KK-GTSFGA-----PCLLENVLAE----MVISAVPSIEMV-RFVNSGTEACMGVLRLARAFTG-RER 183 (476)
Q Consensus 117 ~p~v~~a~~~~l-~~-~~~~~~-----~~~~~~~la~----~l~~~~~~~e~v-~~~~sGseA~~~al~~ar~~~~-~~~ 183 (476)
||.+++|+...+ .+ +..+++ -++...+|.+ .+++++ +.+.+ ++++||+.|+.+++.. +.+ ++.
T Consensus 41 ~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~la~l~-g~~~alv~~~SG~~A~~~~l~a---l~~~GD~ 116 (416)
T PRK13034 41 SPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIERAKQLF-GCDYANVQPHSGSQANGAVYLA---LLKPGDT 116 (416)
T ss_pred CHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHHHHHHh-CCCceEEecCCcHHHHHHHHHH---hcCCCCE
Confidence 899999999985 44 221111 1466677777 888888 55667 4579999999999984 444 455
Q ss_pred EEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccC------CCHHHHHHHHhcCCCCeEEEEE-cccC
Q 011856 184 IIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPF------NDVSALENLFENNKGEIAAIIL-EPVV 256 (476)
Q Consensus 184 ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~------~d~~~le~~l~~~~~~~a~vi~-ep~~ 256 (476)
|++...++.+......... ..+. ..+...+++ .|++++++.++.. ++++|++ ++++
T Consensus 117 Vl~~~~~~~~~~~~g~~~~-----------~~~~----~~~~~~~~~~~~~~~~d~~~le~~l~~~--~~klVi~~~~~~ 179 (416)
T PRK13034 117 ILGMSLSHGGHLTHGAKVS-----------LSGK----WYNAVQYGVDRLTGLIDYDEVEELAKEH--KPKLIIAGFSAY 179 (416)
T ss_pred EEEcCccceeeeecCCcce-----------eccc----eeeeEEcccccccCCcCHHHHHHHHhhc--CCeEEEECCCcc
Confidence 5554444433111000000 0000 000012222 5899999998653 4567777 4554
Q ss_pred CCCCcccCCHHHHHHHHHHHHHhCCEEEEeccc-cCc-cccccchhhccCCCCchh--hhhhhcCCCCcEEEEEecHH-H
Q 011856 257 GNSGFIAPKPDFLNAIRRITKENGALLIFDEVM-TGF-RLAYGGAQEYFGVTPDLT--TLGKIIGGGLPVGAYGGRRD-I 331 (476)
Q Consensus 257 ~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~-~g~-r~g~~~~~~~~g~~pDi~--t~sK~lg~G~~iG~~~~~~~-i 331 (476)
+ ...+ +++|.++|++||++||+|++| .|. ..|... ..++ ..|++ +++|+++|+ ..|+++++++ +
T Consensus 180 g---~~~d----l~~l~~la~~~g~~livD~Aha~G~~~~g~~~--~~~~-~~Di~~~s~~K~l~g~-~GG~v~~~~~~~ 248 (416)
T PRK13034 180 P---RELD----FARFREIADEVGALLMVDMAHIAGLVAAGEHP--NPFP-HAHVVTTTTHKTLRGP-RGGMILTNDEEI 248 (416)
T ss_pred c---cccC----HHHHHHHHHHcCCEEEEeCcccccCcccCCCC--CCCC-CceEEEEeCcccCCCC-CCeEEEECcHHH
Confidence 3 4445 889999999999999999999 454 333211 1111 25665 688999653 2566666654 4
Q ss_pred HHhhcCCCCccccCCCCCcHHHHH-HHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEE
Q 011856 332 MEMVAPAGPMYQAGTLSGNPLAMT-AGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFF 408 (476)
Q Consensus 332 ~~~l~~~~~~~~~~t~~~~~~~~a-aa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~ 408 (476)
.+.++.. .+.+.+-+..+...+ ++.+.++.++. +++.+++.++.++|+++|++++.+ +... .....++.+.+
T Consensus 249 ~~~~~~~--~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~~G~~--~~~~-~~~t~i~~v~~ 323 (416)
T PRK13034 249 AKKINSA--VFPGLQGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVLKERGYD--LVSG-GTDNHLLLVDL 323 (416)
T ss_pred HHHHHhh--cCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHcCCE--eccC-CCCCcEEEEEc
Confidence 4444421 111111112233333 33444554432 345789999999999999876322 1100 12345556665
Q ss_pred ecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccC------CC----cceEEe--C----CCcHHHHHHHHHHHHHHHH
Q 011856 409 TEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPS------QF----EAGFTS--L----AHSSDDIQHTITAAEKVKM 472 (476)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~------~~----~~~~~~--~----~~t~e~i~~~~~~l~~~~~ 472 (476)
.+... ....+.+.|.++||++.+. .+ ..+|++ . .++++|++++++.|++++.
T Consensus 324 ~~~~~------------~~~~~~~~L~~~GI~v~~~~~p~~~~~p~~~~~lR~~~~~~t~~~~~~~di~~l~~~l~~~~~ 391 (416)
T PRK13034 324 RPKGL------------SGKDAEQALERAGITVNKNTVPGDTESPFVTSGIRIGTPAGTTRGFGEAEFREIANWILDVLD 391 (416)
T ss_pred CCCCC------------CHHHHHHHHHhCCcEEeccCCCCCCcCCCCCCeeEeCcHHHHhCCCCHHHHHHHHHHHHHHHh
Confidence 43211 1234557788889999752 11 235653 3 7789999999999998875
Q ss_pred H
Q 011856 473 R 473 (476)
Q Consensus 473 ~ 473 (476)
.
T Consensus 392 ~ 392 (416)
T PRK13034 392 D 392 (416)
T ss_pred c
Confidence 3
No 250
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.79 E-value=7.7e-17 Score=162.14 Aligned_cols=255 Identities=16% Similarity=0.125 Sum_probs=155.7
Q ss_pred CEEEecccChhhccCCCCcHHHHHHHHHHHHhcC--CCC-CC------CHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHH
Q 011856 99 NEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT--SFG-AP------CLLENVLAEMVISAVP-SIEMVRFVNSGTEAC 168 (476)
Q Consensus 99 ~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~--~~~-~~------~~~~~~la~~l~~~~~-~~e~v~~~~sGseA~ 168 (476)
+.|+|..+. +..++.|.+++.+.+.... ... .+ .+...++.+.++++++ +.++++|++|+++++
T Consensus 4 ~~yld~aa~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~ 77 (402)
T TIGR02006 4 PIYLDYAAT------TPVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELIGADSREIVFTSGATESN 77 (402)
T ss_pred cEEeeCCcC------CCCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHH
Confidence 468887654 2358999999988875421 111 11 1334567788888886 567999999999999
Q ss_pred HHHHHHHHh-c-cCCceEEEEeCCCCCCchhHHh---hcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcC
Q 011856 169 MGVLRLARA-F-TGRERIIKFEGCYHGHADPFLV---KAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN 243 (476)
Q Consensus 169 ~~al~~ar~-~-~~~~~ii~~~~~yhg~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~ 243 (476)
..+++.... . .+++.|++... .|........ ..|..+..++... .+ ..|++++++.+++
T Consensus 78 ~~~l~~l~~~~~~~g~~Vi~~~~-~h~s~~~~~~~~~~~g~~v~~v~~~~-~~-------------~~d~~~l~~~l~~- 141 (402)
T TIGR02006 78 NLAIKGIAHFYKSKGNHIITSKT-EHKAVLDTCRYLEREGFEVTYLPPKS-NG-------------LIDLEELKAAIRD- 141 (402)
T ss_pred HHHHHHHHHhhcCCCCEEEECCC-ccHHHHHHHHHHHhcCCEEEEEccCC-CC-------------cCCHHHHHHhcCC-
Confidence 999875432 2 23455555544 4544332221 1233222211110 01 0178999988864
Q ss_pred CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCccccccchhhccCCCCchhhhh--hhcCCCCc
Q 011856 244 KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLG--KIIGGGLP 321 (476)
Q Consensus 244 ~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pDi~t~s--K~lg~G~~ 321 (476)
++++|++..+++++|.+.| +++|.++|++||+++|+|++|+ + |.. ..+..+..+|++++| |.+| ...
T Consensus 142 --~~~lv~v~~~~n~tG~~~~----~~~I~~l~~~~g~~livD~a~a-~--g~~-~~~~~~~~~D~~~~s~~K~~g-p~G 210 (402)
T TIGR02006 142 --DTILVSIMHVNNEIGVIQD----IAAIGEICRERKVFFHVDAAQS-V--GKI-PINVNELKVDLMSISGHKIYG-PKG 210 (402)
T ss_pred --CCEEEEEECCCcCceeccc----HHHHHHHHHHcCCEEEEEcchh-c--CCc-ccCccccCCCEEEEehhhhcC-CCc
Confidence 5778888888888999998 9999999999999999999995 1 111 112223457888877 9765 223
Q ss_pred EEEEEecHHHHHhhcCCCC---c-cccCCCCCcHHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHH
Q 011856 322 VGAYGGRRDIMEMVAPAGP---M-YQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIID 386 (476)
Q Consensus 322 iG~~~~~~~i~~~l~~~~~---~-~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~ 386 (476)
+|+++.+++....+.+... . ......+.+.....+..++++.+.+ +...++.+++.+++++.|++
T Consensus 211 ~G~l~~~~~~~~~~~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~ 281 (402)
T TIGR02006 211 IGALYVRRKPRVRLEALIHGGGHERGMRSGTLPTHQIVGMGEAFRIAKEEMAQDTAHVLALRDRLLNGIKS 281 (402)
T ss_pred eEEEEEccCCCCCCCceecCCCccCCccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhc
Confidence 8998888765443332100 0 0011123455556666677877654 33445555666666666554
No 251
>PLN02242 methionine gamma-lyase
Probab=99.79 E-value=9.7e-18 Score=167.94 Aligned_cols=241 Identities=15% Similarity=0.139 Sum_probs=158.8
Q ss_pred CCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCC
Q 011856 137 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPG 216 (476)
Q Consensus 137 ~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~ 216 (476)
.++...+|.+++++++ +.+.+++++||++|+..++... ...++.|++.++.|.+. ...+.... .
T Consensus 74 ~~Pt~~~LE~~lA~l~-g~~~~l~~~sG~~Ai~~al~al--~~~GD~Vl~~~~~Y~~~-~~~~~~~~--------~---- 137 (418)
T PLN02242 74 FNPTVLNLGRQMAALE-GTEAAYCTASGMSAISSVLLQL--CSSGGHVVASNTLYGGT-HALLAHFL--------P---- 137 (418)
T ss_pred CChhHHHHHHHHHHHh-CCCeEEEEccHHHHHHHHHHHH--hCCCCEEEEcCCcHHHH-HHHHHHhh--------h----
Confidence 5777889999999988 6788899999999999999842 34567777777666443 22221100 0
Q ss_pred CCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCccccc
Q 011856 217 VPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY 296 (476)
Q Consensus 217 ~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~ 296 (476)
+..+..+..++..|+++++++++.. ++++|++|.++|++|.+.+ +++|.++|++||++||+||+|+.+...
T Consensus 138 --~~~G~~~~~~d~~d~e~l~~~i~~~--~tklV~lesp~NPtG~v~d----l~~I~~la~~~gi~livDea~~~~~~~- 208 (418)
T PLN02242 138 --RKCNITTTFVDITDLEAVKKAVVPG--KTKVLYFESISNPTLTVAD----IPELARIAHEKGVTVVVDNTFAPMVLS- 208 (418)
T ss_pred --hccCceEEEcCCCCHHHHHHhcCcC--CCEEEEEecCCCCCCcccC----HHHHHHHHHHhCCEEEEECCCCccCCC-
Confidence 0011124445556899999988642 4789999988888999887 999999999999999999999644211
Q ss_pred cchhhccCCCCchh--hhhhhcCC-CCc-EEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC-CCHHH
Q 011856 297 GGAQEYFGVTPDLT--TLGKIIGG-GLP-VGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE-PGTYE 371 (476)
Q Consensus 297 ~~~~~~~g~~pDi~--t~sK~lg~-G~~-iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~-~~~~~ 371 (476)
...+| .|++ ++||.+++ |++ +|++++++++++.+....... ....+.++..+.|++..+. +.. +..++
T Consensus 209 ---~~~~g--~divv~S~SK~l~g~g~~~gG~iv~~~~li~~l~~~~~~~-~~~~g~~~~~~~A~l~~~~-l~tl~~r~~ 281 (418)
T PLN02242 209 ---PARLG--ADVVVHSISKFISGGADIIAGAVCGPAELVNSMMDLHHGA-LMLLGPTMNPKVAFELSER-LPHLSLRMK 281 (418)
T ss_pred ---HHHcC--CcEEEEeCccccCCCCCceEEEEEcCHHHHHHHHHHhhhh-hhccCCCCCHHHHHHHHcC-CCcHHHHHH
Confidence 11223 4554 79999984 676 588899999888876321110 0122333334445444432 222 44567
Q ss_pred HHHHHHHHHHHHHHHHhhh--cCC-ce---------Ee---eeeceeEEEEEe
Q 011856 372 YLNKITGELTQGIIDAGKK--AGH-AI---------CG---GYISGMFGFFFT 409 (476)
Q Consensus 372 ~~~~~~~~l~~~L~~~~~~--~~~-~~---------~v---~~~g~~~~i~~~ 409 (476)
+.+++.+++.+.|++...+ +|. .. .. .+.|.|+.|++.
T Consensus 282 ~~~~~a~~la~~L~~~~~~V~yP~l~~~p~~~~~~~~~~~~~g~g~~~sf~l~ 334 (418)
T PLN02242 282 EHCRRAMEYAKRMKELGLKVIYPGLEDHPQHALLKSMANKGYGFGGLLCLDMD 334 (418)
T ss_pred HHHHHHHHHHHHHHhCCCEEECCCCCCCccHHHHHHhcccCCCceeEEEEEEC
Confidence 7888889999998876321 111 00 11 367889999984
No 252
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.78 E-value=5.7e-17 Score=159.99 Aligned_cols=280 Identities=16% Similarity=0.094 Sum_probs=168.3
Q ss_pred CHHHHHHHHHHHhhCCC---CCeEEEeCCHHHHHHHHHHHHHhc-----------cCCceEEEEeCCCCCCchhHHhhcC
Q 011856 138 CLLENVLAEMVISAVPS---IEMVRFVNSGTEACMGVLRLARAF-----------TGRERIIKFEGCYHGHADPFLVKAG 203 (476)
Q Consensus 138 ~~~~~~la~~l~~~~~~---~e~v~~~~sGseA~~~al~~ar~~-----------~~~~~ii~~~~~yhg~~~~~~~~~g 203 (476)
.+++++++++++++++. .+.++|++||++|+..+++.++.. .+.+.+|+.....|......+...|
T Consensus 37 ~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~~~~~~~g 116 (345)
T cd06450 37 TEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVEKAAAYLD 116 (345)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhHHHHHHHHHh
Confidence 57778888888888752 347999999999999999977542 1234466666667766555544444
Q ss_pred CCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhc---CCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhC
Q 011856 204 SGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFEN---NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENG 280 (476)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~---~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g 280 (476)
..+...+.... + .-|+++|++.+++ .+.++++|++...++++|.+.+ +++|.++|++||
T Consensus 117 ~~~~~v~~~~~-~-------------~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~----~~~i~~~~~~~~ 178 (345)
T cd06450 117 VKVRLVPVDED-G-------------RMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDP----LEEIADLAEKYD 178 (345)
T ss_pred cCeEEeeeCCC-C-------------CcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCC----HHHHHHHHHHhC
Confidence 43333221111 1 1289999999874 1224556665555566888877 999999999999
Q ss_pred CEEEEeccccCc-cccccchhhccCC-CCchh--hhhhhcCCCCcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHH
Q 011856 281 ALLIFDEVMTGF-RLAYGGAQEYFGV-TPDLT--TLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTA 356 (476)
Q Consensus 281 ~llI~DEv~~g~-r~g~~~~~~~~g~-~pDi~--t~sK~lg~G~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aa 356 (476)
++|++|++|.++ ...........+. ..|.+ +++|.+++++++|+++.+ .+++.+
T Consensus 179 ~~l~vD~a~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~p~g~g~~~~~----------------------~~~~~~ 236 (345)
T cd06450 179 LWLHVDAAYGGFLLPFPEPRHLDFGIERVDSISVDPHKYGLVPLGCSAVLVR----------------------ALKLWA 236 (345)
T ss_pred CeEEEechhhHHHhhChhhHHHhcCccccCEEEEchhHhhCCCcchHHHHHH----------------------HHHHHH
Confidence 999999999654 2111100001111 24543 688988777777776544 233333
Q ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHH
Q 011856 357 GIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLE 436 (476)
Q Consensus 357 a~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 436 (476)
++..+....-++..++..++.+++.+.|.++. ++.......+.++.+.+.... + ......++.+.|.+
T Consensus 237 ~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~---~~~~~~~~~~~iv~f~~~~~~--~-------~~~~~~~i~~~L~~ 304 (345)
T cd06450 237 TLRRFGRDGYGEHIDRIVDLAKYLAELIRADP---GFELLGEPNLSLVCFRLKPSV--K-------LDELNYDLSDRLNE 304 (345)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCC---CeEEecCCceeEEEEEECCcc--h-------hhHHHHHHHHHHHh
Confidence 33333211114566677777777777776541 111111123455555553210 0 01223578888999
Q ss_pred CCeEeccCC----CcceEEeC--CC-cHHHHHHHHHHHHH
Q 011856 437 EGVYFAPSQ----FEAGFTSL--AH-SSDDIQHTITAAEK 469 (476)
Q Consensus 437 ~Gv~~~~~~----~~~~~~~~--~~-t~e~i~~~~~~l~~ 469 (476)
+|+++.+.. ...+|+++ .+ |++|+|++++.|++
T Consensus 305 ~g~~~~~~~~~~~~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 305 RGGWHVPATTLGGPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred cCCEEEEeeEECCeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 965544321 23567653 33 99999999999876
No 253
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.77 E-value=6.8e-16 Score=154.42 Aligned_cols=322 Identities=16% Similarity=0.140 Sum_probs=184.5
Q ss_pred EEecccChhhccCCCCcHHHHHHHHHHHHhc--CCCC---CCCHHHHHHHHHHH---hhCC--CCCeEEEeCCHHHHHHH
Q 011856 101 YIDYVGSWGPAIIGHADDQVLAALGETMKKG--TSFG---APCLLENVLAEMVI---SAVP--SIEMVRFVNSGTEACMG 170 (476)
Q Consensus 101 ~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~--~~~~---~~~~~~~~la~~l~---~~~~--~~e~v~~~~sGseA~~~ 170 (476)
|+|..++ ...++.|.+++.+.+... ...+ ++......+.+.+. +.++ .+++|+|++|++|++..
T Consensus 2 yld~aa~------~~~~~~v~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~t~g~teal~~ 75 (382)
T TIGR03403 2 YLDNNAT------TMLDPKVKELMDPFFCDIYGNPNSLHQFGTATHPAIAEALDKLYKGINARDLDDIIITSCATESNNW 75 (382)
T ss_pred cccCcCC------CCCCHHHHHHHHHHHHhcCcCCccccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHH
Confidence 5565544 235789999999888752 1111 11122223333333 2332 36899999999999999
Q ss_pred HHHHHHh--c-cC-CceEEEEeCCCCCCchhH--HhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCC
Q 011856 171 VLRLARA--F-TG-RERIIKFEGCYHGHADPF--LVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK 244 (476)
Q Consensus 171 al~~ar~--~-~~-~~~ii~~~~~yhg~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~ 244 (476)
+++.... + .+ ++.|++....+....... +...|..+..++.... +. -|++++++.++.
T Consensus 76 ~~~~~~~~~~~~~~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~~~~-g~-------------~d~~~l~~~i~~-- 139 (382)
T TIGR03403 76 VLKGVYFDEILKGGKNHIITTEVEHPAVRATCAFLESLGVEVTYLPINEQ-GT-------------ITAEQVREAITE-- 139 (382)
T ss_pred HHHHHHHhhcccCCCCEEEEcCCccHHHHHHHHHHHHCCCEEEEEecCCC-CC-------------CCHHHHHHhccc--
Confidence 9985321 1 23 345666554333322221 1222332222111100 10 178899988864
Q ss_pred CCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCccccccchhhccCCCCchhhhh--hhcCCCCcE
Q 011856 245 GEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLG--KIIGGGLPV 322 (476)
Q Consensus 245 ~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pDi~t~s--K~lg~G~~i 322 (476)
++++|++..+++++|.+.| +++|.++|++||+++|+|++|. + |.. ..+......|++++| |.+|. -.+
T Consensus 140 -~t~lv~~~~~~n~tG~~~~----~~~I~~la~~~g~~~ivD~a~~-~--g~~-~~~~~~~~~D~~~~s~~K~~gp-~G~ 209 (382)
T TIGR03403 140 -KTALVSVMWANNETGMIFP----IKEIGEICKERGVLFHTDAVQA-I--GKI-PVDVQKAGVDFLSFSAHKFHGP-KGV 209 (382)
T ss_pred -CCeEEEEEcccCCCccccC----HHHHHHHHHHcCCEEEEechhh-c--CCC-ccCccccCCCEEEEcchhhCCC-Cce
Confidence 4677888878888999999 8999999999999999999985 1 110 111112346777655 96552 126
Q ss_pred EEEEecHHHHHhhcCC----CCccccCCCCCcHHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHhhhcCCceE
Q 011856 323 GAYGGRRDIMEMVAPA----GPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIIDAGKKAGHAIC 396 (476)
Q Consensus 323 G~~~~~~~i~~~l~~~----~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 396 (476)
|++..+++. .+.+. .........+.|.+++.++.++++.+.+ +...++.+++.+++.++|.++ +.+..
T Consensus 210 g~l~vr~~~--~~~p~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~----~~~~~ 283 (382)
T TIGR03403 210 GGLYIRKGV--ELTPLFHGGEHMGGRRSGTLNVPYIVAMGEAMRLANEYLDFEKSHVRRLRDRLEDALLEL----PDVFV 283 (382)
T ss_pred EEEEECCCC--CCCCcccCCCCCCCcccCCcChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcC----CCEEE
Confidence 888766653 11110 0000011344677777777778876543 333455555666666665542 21111
Q ss_pred eee----eceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCC-----------------------Ccce
Q 011856 397 GGY----ISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ-----------------------FEAG 449 (476)
Q Consensus 397 v~~----~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~-----------------------~~~~ 449 (476)
+.. .+.++.+.+... ....+...|.++||.++.+. ...+
T Consensus 284 ~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~i 349 (382)
T TIGR03403 284 VGDREHRVPNTILISIKGV--------------EGEAMLWDLNKAGIAASTGSACASEDLEANPVMVAIGADKELAHTAI 349 (382)
T ss_pred ECCCCCCcCCEEEEEeCCC--------------CHHHHHHhhccCCEEEEchhccCCCCCCcCHHHHHcCCChHHhCeeE
Confidence 111 123444444210 12456667888999998531 1236
Q ss_pred EEe--CCCcHHHHHHHHHHHHHHHHHh
Q 011856 450 FTS--LAHSSDDIQHTITAAEKVKMRF 474 (476)
Q Consensus 450 ~~~--~~~t~e~i~~~~~~l~~~~~~~ 474 (476)
|++ ..+|++|||+++++|+++++++
T Consensus 350 R~s~~~~~t~~did~~~~~l~~~~~~~ 376 (382)
T TIGR03403 350 RLSLSRFTTEEEIDYTIEVFKKAVQRL 376 (382)
T ss_pred EEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 764 5679999999999999988754
No 254
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.76 E-value=6.8e-17 Score=161.03 Aligned_cols=285 Identities=16% Similarity=0.110 Sum_probs=178.0
Q ss_pred CCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCC
Q 011856 136 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 215 (476)
Q Consensus 136 ~~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~ 215 (476)
++++...+|.+.+++++ +.+..++++||+.|+..++... ...++.|++..+.| +.+...+..... ..
T Consensus 58 ~~~pt~~~Le~~lA~l~-G~~~al~~~sG~~Ai~~~l~al--~~~Gd~Vv~~~~~y-~~~~~~~~~~~~---------~~ 124 (386)
T PRK06767 58 LGNPTVKLFEERMAVLE-GGEEALAFGSGMAAISATLIGF--LKAGDHIICSNGLY-GCTYGFLEVLEE---------KF 124 (386)
T ss_pred CCCcchHHHHHHHHHHh-CCCcEEEECCHHHHHHHHHHHH--hCCCCEEEEcCCcH-HHHHHHHHHHHh---------hc
Confidence 35666788999999888 4567888899999998888632 33456666665544 434333322111 00
Q ss_pred CCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccc
Q 011856 216 GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLA 295 (476)
Q Consensus 216 ~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g 295 (476)
++ ++..++..|++++++.++. ++++|++|.++|++|.+.+ +++|.++|+++|+++|+||+|......
T Consensus 125 gi------~~~~~~~~d~~~l~~~i~~---~tklV~lesp~NptG~v~d----l~~I~~la~~~g~~vivD~a~a~~~~~ 191 (386)
T PRK06767 125 MI------THSFCDMETEADIENKIRP---NTKLIFVETPINPTMKLID----LKQVIRVAKRNGLLVIVDNTFCSPYLQ 191 (386)
T ss_pred Ce------EEEEeCCCCHHHHHHhhCc---CceEEEEeCCCCCCceecC----HHHHHHHHHHcCCEEEEECCCcccccC
Confidence 11 1223344578999988863 5788999888888999988 999999999999999999999421111
Q ss_pred ccchhhccCCCCchh--hhhhhcCC-CCcE-EEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHHH
Q 011856 296 YGGAQEYFGVTPDLT--TLGKIIGG-GLPV-GAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYE 371 (476)
Q Consensus 296 ~~~~~~~~g~~pDi~--t~sK~lg~-G~~i-G~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~ 371 (476)
... ..| .|++ +++|.+++ |.++ |+++++++.++.+........++ ..+|+.+.+++..|+.+ +..++
T Consensus 192 ~pl---~~g--~Div~~S~sK~l~g~g~~~gG~v~~~~~~i~~~~~~~~~~~g~--~~~~~~a~l~~~~L~tl--~~r~~ 262 (386)
T PRK06767 192 RPL---ELG--CDAVVHSATKYIGGHGDVVAGVTICKTRALAEKIRPMRKDIGG--IMAPFDAWLLLRGLKTL--AVRMD 262 (386)
T ss_pred Cch---hcC--CcEEEecCcceecCCCCceeEEEEeChHHHHHHHHHHHHHhCC--CCCHHHHHHHHcCCCcH--HHHHH
Confidence 111 123 3655 68899986 7775 77888988776653110111122 23566655555554432 34556
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCce------------EeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCe
Q 011856 372 YLNKITGELTQGIIDAGKKAGHAI------------CGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGV 439 (476)
Q Consensus 372 ~~~~~~~~l~~~L~~~~~~~~~~~------------~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv 439 (476)
+.+++..++.+.|++. +.+. ..++.|.|+.|++.+. .+...+|.+.|...++
T Consensus 263 ~~~~~a~~la~~L~~~----p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~~------------~~~~~~f~~~l~~~~~ 326 (386)
T PRK06767 263 RHCDNAEKIVSFLKNH----DAVEGVWYPEGELASRQMKRGGGVISFSIKGG------------KEETQAFINDLHFITI 326 (386)
T ss_pred HHHHHHHHHHHHHHcC----CCccEEECCCcHHHHHhCCCCCceEEEEEcCC------------HHHHHHHHHhCCccEE
Confidence 7778888888887764 2111 1235688888888521 2234577777776665
Q ss_pred EeccCCCcc---------------------------eEEeCCCcHHHHHHHHHHHHHHHHH
Q 011856 440 YFAPSQFEA---------------------------GFTSLAHSSDDIQHTITAAEKVKMR 473 (476)
Q Consensus 440 ~~~~~~~~~---------------------------~~~~~~~t~e~i~~~~~~l~~~~~~ 473 (476)
.+.-++... +|++... ||.+.+++-|+++++.
T Consensus 327 ~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGl--E~~~dl~~dl~~al~~ 385 (386)
T PRK06767 327 AVSLGDTETLIQHPATMTHAAIPAELRQEMGIYDNLIRLSVGL--ESWEDIVSDLEQALKK 385 (386)
T ss_pred ecCCCCcCccccCCCccccccCCHHHHHhcCCCCCeEEEEecc--CCHHHHHHHHHHHHhh
Confidence 554443221 3444333 5677778888877764
No 255
>PLN02651 cysteine desulfurase
Probab=99.76 E-value=1.9e-16 Score=157.22 Aligned_cols=247 Identities=16% Similarity=0.103 Sum_probs=154.0
Q ss_pred CCCcHHHHHHHHHHHHhcC--CCC-CC------CHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHHHh-c-cCC
Q 011856 114 GHADDQVLAALGETMKKGT--SFG-AP------CLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARA-F-TGR 181 (476)
Q Consensus 114 G~~~p~v~~a~~~~l~~~~--~~~-~~------~~~~~~la~~l~~~~~-~~e~v~~~~sGseA~~~al~~ar~-~-~~~ 181 (476)
+..++.+.+++.+.+.... ... .+ .+...++.+.++++++ ..+.++|++|+++++..++..+.. + .++
T Consensus 9 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~t~~~t~a~~~~l~~~~~~~~~~g 88 (364)
T PLN02651 9 TPIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIGADPKEIIFTSGATESNNLAIKGVMHFYKDKK 88 (364)
T ss_pred CCCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhccCCC
Confidence 3468899999988875421 111 11 2335677888888886 467899999999999999876532 2 345
Q ss_pred ceEEEEeCCCCCCchhHHh--hcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCC
Q 011856 182 ERIIKFEGCYHGHADPFLV--KAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNS 259 (476)
Q Consensus 182 ~~ii~~~~~yhg~~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~ 259 (476)
++|++.+..|+........ ..|..+...+... .+ .-|++++++.+++ ++++|++..+++.+
T Consensus 89 ~~vl~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~-~~-------------~~d~~~l~~~i~~---~t~lv~v~~~~n~t 151 (364)
T PLN02651 89 KHVITTQTEHKCVLDSCRHLQQEGFEVTYLPVKS-DG-------------LVDLDELAAAIRP---DTALVSVMAVNNEI 151 (364)
T ss_pred CEEEEcccccHHHHHHHHHHHhcCCEEEEEccCC-CC-------------cCCHHHHHHhcCC---CcEEEEEECCCCCc
Confidence 5666655444442222221 1222221111110 01 0178999999864 57888888888889
Q ss_pred CcccCCHHHHHHHHHHHHHhCCEEEEeccccCccccccchhhccCCCCchhhh--hhhcCCCCcEEEEEecHHHHHhhcC
Q 011856 260 GFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTL--GKIIGGGLPVGAYGGRRDIMEMVAP 337 (476)
Q Consensus 260 G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pDi~t~--sK~lg~G~~iG~~~~~~~i~~~l~~ 337 (476)
|.+.| +++|.++|++||+++++|.+|+. |. ...+.-....|++++ -| +++...+|++..+++..+.+.+
T Consensus 152 G~~~~----l~~I~~~~~~~g~~~~vD~a~~~---g~-~~~~~~~~~~D~~~~s~hK-~~gp~G~g~l~v~~~~~~~l~p 222 (364)
T PLN02651 152 GVIQP----VEEIGELCREKKVLFHTDAAQAV---GK-IPVDVDDLGVDLMSISGHK-IYGPKGVGALYVRRRPRVRLEP 222 (364)
T ss_pred eeccc----HHHHHHHHHHcCCEEEEEcchhh---CC-cccCcccCCCCEEEechhh-hCCCCceEEEEEcCCCCCCCCc
Confidence 99999 99999999999999999999951 11 111112234587754 48 4443458999888876665543
Q ss_pred CCCc----cccCCCCCcHHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHH
Q 011856 338 AGPM----YQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIID 386 (476)
Q Consensus 338 ~~~~----~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~ 386 (476)
.... ...-..+.|..++.+..++|+.+.+ ++..++.+++.+++++.|.+
T Consensus 223 ~~~g~~~~~~~~~GT~~~~~~~~l~~al~~~~~~~~~i~~~~~~l~~~l~~~l~~ 277 (364)
T PLN02651 223 LMSGGGQERGRRSGTENTPLVVGLGAACELAMKEMDYDEKHMKALRERLLNGLRA 277 (364)
T ss_pred cccCCCccCCccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh
Confidence 1100 0011223466677777788887764 44556666666666666654
No 256
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.76 E-value=3e-16 Score=155.53 Aligned_cols=310 Identities=13% Similarity=0.065 Sum_probs=192.1
Q ss_pred cHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCch
Q 011856 117 DDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHAD 196 (476)
Q Consensus 117 ~p~v~~a~~~~l~~~~~~~~~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~ 196 (476)
.++..+++.+.+..+..++ ..+...++++.+++++ +.+++++++||++|+..+++.. ...+++.||+...+|.+...
T Consensus 10 ~~~e~~a~~~~~~~~~~~~-~g~~~~~~e~~la~~~-g~~~~v~~~sgt~aL~~~l~al-~~~pGd~Viv~~~t~~~~~~ 86 (376)
T TIGR02379 10 TGQELEYIAEAISEGKLSG-DGPFSRRCETWLENRT-GTKKALLTPSCTAALEMAALLL-DIQPGDEVIMPSYTFVSTAN 86 (376)
T ss_pred CHHHHHHHHHHHHcCCccC-CcHHHHHHHHHHHHHh-CCCeEEEeCCHHHHHHHHHHHc-CCCCcCEEEECCCCcHHHHH
Confidence 3556888888887754332 3556788888888887 6789999999999999988742 24566788888888776433
Q ss_pred hHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHH
Q 011856 197 PFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRIT 276 (476)
Q Consensus 197 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~ 276 (476)
. +...|..+...+.... +. --|++++++.++. ++++|+ |++ ..|...+ +++|.++|
T Consensus 87 ~-~~~~G~~~v~vd~d~~-~~------------~~d~~~le~~i~~---~tk~Ii--p~~-~~G~~~d----~~~I~~la 142 (376)
T TIGR02379 87 A-FVLRGAKIVFVDIRPD-TM------------NIDETLIESAITH---RTKAIV--PVH-YAGVACD----MDTIMALA 142 (376)
T ss_pred H-HHHcCCEEEEEecCCC-cC------------CCCHHHHHHhcCc---CceEEE--EeC-CCCCccC----HHHHHHHH
Confidence 3 3334443332222111 00 0178899998864 566665 333 3566676 89999999
Q ss_pred HHhCCEEEEeccccCccccccchhhccCCCCchhhhh----hhcCCCCcEEEEEec-HHHHHhhcCC---CCc-------
Q 011856 277 KENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLG----KIIGGGLPVGAYGGR-RDIMEMVAPA---GPM------- 341 (476)
Q Consensus 277 ~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pDi~t~s----K~lg~G~~iG~~~~~-~~i~~~l~~~---~~~------- 341 (476)
++||++||.|++|+-... +.....|..-|+.+|| |.+..|.+.|+++.+ +++.+.++.. +..
T Consensus 143 ~~~~i~vIeDaa~~~g~~---~~~~~~g~~~~~~~fSf~~~K~l~~g~~gG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~ 219 (376)
T TIGR02379 143 NKHQLFVIEDAAQGVMST---YKGRALGSIGHLGTFSFHETKNYTSGGEGGALLINDQAFIERAEIIREKGTNRSQFFRG 219 (376)
T ss_pred HHCCCEEEEECccccCCc---cCCcccCCCCCEEEEeCCCCCcCcccCCceEEEECCHHHHHHHHHHHHhCCCCcccccc
Confidence 999999999999962210 0011223334777888 999988889998665 7777766521 100
Q ss_pred --------cccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhh----hcC-CceEeeeeceeEEEEE
Q 011856 342 --------YQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGK----KAG-HAICGGYISGMFGFFF 408 (476)
Q Consensus 342 --------~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~----~~~-~~~~v~~~g~~~~i~~ 408 (476)
..+..+-.+.+.++.+++.|+.+ ++..++-+++.+++.+.|..+.. ..+ .+......-.++.+.+
T Consensus 220 ~~~~~~~~~~g~n~~~~~~~Aa~g~~qL~~l--~~~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 297 (376)
T TIGR02379 220 EVDKYTWRDIGSSYLPSELQAAYLWAQLEQA--DRINQDRLATWQLYQDALKPLEEKGIIELPSIPNGCQHNAHMFYIKL 297 (376)
T ss_pred CCCcceeeeecccCCccHHHHHHHHHHHHHh--HHHHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCCCeeeeEEEEEEE
Confidence 01223344566667777777765 44666666777777777765421 111 0101111112333443
Q ss_pred ecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCC-----------C---------------cceEEe--CCCcHHHH
Q 011856 409 TEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ-----------F---------------EAGFTS--LAHSSDDI 460 (476)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~-----------~---------------~~~~~~--~~~t~e~i 460 (476)
... ...+++.+.|.++||..+... . ..++++ ...|++|+
T Consensus 298 ~~~-------------~~r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~~~~~~~~~l~LP~~~~l~~~~~ 364 (376)
T TIGR02379 298 KDE-------------DDRNELIKYLKEQEIMAVFHYVPLHSSPAGRYFGRFHGEDIYTTKESERLVRLPLYYGLSKEDQ 364 (376)
T ss_pred CCc-------------CCHHHHHHHHHHCCCCccccCcCCCcchhHHhhCCCCCCChHHHHHHhceEEccCCCCCCHHHH
Confidence 210 113688899999999765211 0 013443 45799999
Q ss_pred HHHHHHHHHHH
Q 011856 461 QHTITAAEKVK 471 (476)
Q Consensus 461 ~~~~~~l~~~~ 471 (476)
+..++.+++++
T Consensus 365 ~~i~~~i~~~~ 375 (376)
T TIGR02379 365 ARVIQTICDYL 375 (376)
T ss_pred HHHHHHHHHHh
Confidence 99999998865
No 257
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.76 E-value=6.6e-16 Score=154.23 Aligned_cols=311 Identities=15% Similarity=0.114 Sum_probs=188.1
Q ss_pred CcHHHHHHHHHHHHhcC---CC-CCC-----CHHHHHHHHHHHhhCC--CCCeEEEeCCHHHHHHHHHHHHHhccCCceE
Q 011856 116 ADDQVLAALGETMKKGT---SF-GAP-----CLLENVLAEMVISAVP--SIEMVRFVNSGTEACMGVLRLARAFTGRERI 184 (476)
Q Consensus 116 ~~p~v~~a~~~~l~~~~---~~-~~~-----~~~~~~la~~l~~~~~--~~e~v~~~~sGseA~~~al~~ar~~~~~~~i 184 (476)
.++.+.+++.+.+++.. .+ .++ .....++.+.+++++. ..++|+|++|+++++..++.. ....++.|
T Consensus 12 ~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~--~~~~gd~v 89 (376)
T TIGR01977 12 KPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNAPSSAHVVFTNNATTALNIALKG--LLKEGDHV 89 (376)
T ss_pred CCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHh--ccCCCCEE
Confidence 46789999988887631 11 122 1445678888888875 235899999999999998874 23455677
Q ss_pred EEEeCCCCCCchhHH---hhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCc
Q 011856 185 IKFEGCYHGHADPFL---VKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGF 261 (476)
Q Consensus 185 i~~~~~yhg~~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~ 261 (476)
++....|........ ...|..+...+... .+ ..|++++++.+++ ++++|++..+++++|.
T Consensus 90 l~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~-------------~~d~~~l~~~~~~---~~~~v~~~~~~n~tG~ 152 (376)
T TIGR01977 90 ITTPMEHNSVARPLECLKEQIGVEITIVKCDN-EG-------------LISPERIKRAIKT---NTKLIVVSHASNVTGT 152 (376)
T ss_pred EECcchhhHHHHHHHHHHHHcCcEEEEEecCC-CC-------------CcCHHHHHHhcCC---CCeEEEEECCCCCccc
Confidence 776655444322211 11233222211110 00 1278999998853 5777888888888999
Q ss_pred ccCCHHHHHHHHHHHHHhCCEEEEecccc-CccccccchhhccCCCCchh--hhhhhcCCCCcEEEEEecHHH-HHhhcC
Q 011856 262 IAPKPDFLNAIRRITKENGALLIFDEVMT-GFRLAYGGAQEYFGVTPDLT--TLGKIIGGGLPVGAYGGRRDI-MEMVAP 337 (476)
Q Consensus 262 i~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~r~g~~~~~~~~g~~pDi~--t~sK~lg~G~~iG~~~~~~~i-~~~l~~ 337 (476)
+.+ +++|.++|+++|+++|+|++|+ |.. .+..+. ..+|++ ++.|.+++.-..|+++.+++. +..+..
T Consensus 153 ~~~----~~~i~~l~~~~~~~livD~a~~~g~~---~~~~~~--~~~D~~~~s~~K~l~~p~g~g~l~~~~~~~~~~~~~ 223 (376)
T TIGR01977 153 ILP----IEEIGELAQENGIFFILDAAQTAGVI---PIDMTE--LAIDMLAFTGHKGLLGPQGTGGLYIREGIKLKPLKS 223 (376)
T ss_pred cCC----HHHHHHHHHHcCCEEEEEhhhccCcc---CCCchh--cCCCEEEecccccccCCCCceEEEEcCCcCcCceec
Confidence 998 8999999999999999999995 221 011111 245766 456988753346777555543 222111
Q ss_pred CCCcc-------------ccCCCCCcHHHHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHHHHHHhhhcCCce--Eeee
Q 011856 338 AGPMY-------------QAGTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAGHAI--CGGY 399 (476)
Q Consensus 338 ~~~~~-------------~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~--~v~~ 399 (476)
.+... .+...+.+...+.+..++++.+.+ +...++.+++.+++++.|.+... ..+.. +...
T Consensus 224 ~~~~~~~~~~~~~~~~~~r~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~-~~~~~~~~~~~ 302 (376)
T TIGR01977 224 GGTGSHSALIDQPSELPDRFESGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLREINK-VKIYGPADPAN 302 (376)
T ss_pred CCCccccccccccccchhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCC-eEEeCCCCccc
Confidence 10000 001113456666777778887765 34567777777777777765321 10100 0011
Q ss_pred eceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHC-CeEeccCC--------------CcceEEe--CCCcHHHHHH
Q 011856 400 ISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEE-GVYFAPSQ--------------FEAGFTS--LAHSSDDIQH 462 (476)
Q Consensus 400 ~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~~--------------~~~~~~~--~~~t~e~i~~ 462 (476)
.+.++.+.+... ...++.+.|.++ ||.+..+. ...+|++ ..+|++|+++
T Consensus 303 ~~~~v~~~~~~~--------------~~~~~~~~L~~~~gi~v~~g~~~~~~~~~~~g~~~~~~iRis~~~~~t~~dv~~ 368 (376)
T TIGR01977 303 RVGVVSFTVEGI--------------DSEEVADILDEKFDIATRTGLHCAPLAHKTIGTFATGTIRLSLGYFNTEEEIEK 368 (376)
T ss_pred cCCeEEEEECCC--------------CHHHHHHHHhccCCEEEEcccccchHHHHHhCCCCCCeEEEecCCCCCHHHHHH
Confidence 244555554211 125678888887 98886542 2346764 6779999999
Q ss_pred HHHHHHH
Q 011856 463 TITAAEK 469 (476)
Q Consensus 463 ~~~~l~~ 469 (476)
++++|++
T Consensus 369 ~~~~l~~ 375 (376)
T TIGR01977 369 LLEALSE 375 (376)
T ss_pred HHHHHhh
Confidence 9999975
No 258
>PRK14012 cysteine desulfurase; Provisional
Probab=99.75 E-value=5.7e-16 Score=156.03 Aligned_cols=254 Identities=19% Similarity=0.188 Sum_probs=151.3
Q ss_pred CEEEecccChhhccCCCCcHHHHHHHHHHHH--hc--CCCC-CC------CHHHHHHHHHHHhhCC-CCCeEEEeCCHHH
Q 011856 99 NEYIDYVGSWGPAIIGHADDQVLAALGETMK--KG--TSFG-AP------CLLENVLAEMVISAVP-SIEMVRFVNSGTE 166 (476)
Q Consensus 99 ~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~--~~--~~~~-~~------~~~~~~la~~l~~~~~-~~e~v~~~~sGse 166 (476)
+.|+|..+. +..++.+.+++.+.+. .. .... .. .+...++.+.++++++ +.++++|++||++
T Consensus 4 ~iyld~a~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g~~~~~v~~~~g~t~ 77 (404)
T PRK14012 4 PIYLDYSAT------TPVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLIGADPREIVFTSGATE 77 (404)
T ss_pred eEEecCcCC------CCCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHcCcCcCeEEEeCCHHH
Confidence 356775543 3468899999988875 21 1110 00 1334567788888886 4578999999999
Q ss_pred HHHHHHHHHHh--ccCCceEEEEeCCCCCCchhHHhh--cCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhc
Q 011856 167 ACMGVLRLARA--FTGRERIIKFEGCYHGHADPFLVK--AGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFEN 242 (476)
Q Consensus 167 A~~~al~~ar~--~~~~~~ii~~~~~yhg~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~ 242 (476)
++..+++.... ...++.|++....|+......... .|..+...+... .+. -|+++|++.+++
T Consensus 78 al~~~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~~~-~g~-------------~d~~~l~~~i~~ 143 (404)
T PRK14012 78 SDNLAIKGAAHFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLDPQS-NGI-------------IDLEKLEAAMRD 143 (404)
T ss_pred HHHHHHHHHHHhhcCCCCEEEEecCccHHHHHHHHHHHhCCCEEEEEccCC-CCc-------------CCHHHHHHhcCC
Confidence 99999875432 234566666655554432222211 233222211110 110 178999999864
Q ss_pred CCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCccccccchhhccCCCCchhhhh--hhcCCCC
Q 011856 243 NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLG--KIIGGGL 320 (476)
Q Consensus 243 ~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pDi~t~s--K~lg~G~ 320 (476)
++++|++..+++++|.+.+ +++|.++|+++|+++|+|++|+ + |.. ..+.....+|++++| |.+|++
T Consensus 144 ---~t~lv~~~~~~n~tG~~~~----~~~I~~la~~~g~~vivD~a~~-~--g~~-~~~~~~~~~D~~~~s~~K~~gp~- 211 (404)
T PRK14012 144 ---DTILVSIMHVNNEIGVIQD----IAAIGEICRERGIIFHVDAAQS-V--GKV-PIDLSKLKVDLMSFSAHKIYGPK- 211 (404)
T ss_pred ---CCEEEEEECcCCCccchhh----HHHHHHHHHHcCCEEEEEcchh-c--CCc-ccCcccCCCCEEEEehhhccCCC-
Confidence 5778888888888999998 9999999999999999999995 1 111 011112347877655 977643
Q ss_pred cEEEEEecHHHHHhhcCC--C----CccccCCCCCcHHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHH
Q 011856 321 PVGAYGGRRDIMEMVAPA--G----PMYQAGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIID 386 (476)
Q Consensus 321 ~iG~~~~~~~i~~~l~~~--~----~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~ 386 (476)
.+|+++.+++....+.+. + ..+..+| .+.....+..++++.++. ++..++.+++.+++.+.|++
T Consensus 212 g~G~l~~~~~~~~~~~~~~~g~~~~~~~~~gt--~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~ 283 (404)
T PRK14012 212 GIGALYVRRKPRVRLEAQMHGGGHERGMRSGT--LPTHQIVGMGEAARIAKEEMATENERIRALRDRLWNGIKD 283 (404)
T ss_pred ceEEEEEecCCCCCCCceecCCCccCCccCCC--cCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhc
Confidence 589988776643333210 0 0011122 233333344455554432 34556666666666666654
No 259
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.75 E-value=3.4e-16 Score=154.88 Aligned_cols=299 Identities=15% Similarity=0.095 Sum_probs=182.3
Q ss_pred HHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhh
Q 011856 122 AALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVK 201 (476)
Q Consensus 122 ~a~~~~l~~~~~~~~~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~ 201 (476)
+++.+.+.++.. +..+...++.+.+++++ +.+++++++||++|++.+++..+ ...++.|++...+||+.... +..
T Consensus 3 ~~~~~~~~~~~~--~~~~~~~~~~~~la~~~-~~~~~~~~~sgt~al~~~l~~l~-~~~gd~vl~~~~~~~~~~~~-~~~ 77 (352)
T cd00616 3 EAVEEVLDSGWL--TLGPKVREFEKAFAEYL-GVKYAVAVSSGTAALHLALRALG-IGPGDEVIVPSFTFVATANA-ILL 77 (352)
T ss_pred HHHHHHHHcCCc--cCCHHHHHHHHHHHHHh-CCCeEEEECCHHHHHHHHHHHcC-CCCCCEEEeCCcchHHHHHH-HHH
Confidence 566677766432 34556778888888888 45789999999999999998532 24567888888888775433 333
Q ss_pred cCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCC
Q 011856 202 AGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGA 281 (476)
Q Consensus 202 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~ 281 (476)
.|..+...+..... ...|++++++.++. ++++|++.+ ..|...+ +++|+++|+++|+
T Consensus 78 ~g~~~~~~~~~~~~-------------~~~d~~~l~~~i~~---~~~~v~~~~---~~G~~~~----~~~i~~l~~~~~i 134 (352)
T cd00616 78 LGATPVFVDIDPDT-------------YNIDPELIEAAITP---RTKAIIPVH---LYGNPAD----MDAIMAIAKRHGL 134 (352)
T ss_pred cCCeEEEEecCCCc-------------CCcCHHHHHHhcCc---CCeEEEEEC---CCCCcCC----HHHHHHHHHHcCC
Confidence 34332221111000 01278999988853 567777654 3566666 8999999999999
Q ss_pred EEEEecccc-Cc-cccccchhhccCCCCchhhhh----hhcCCCCcEEEEEec-HHHHHhhcC---CCCc---------c
Q 011856 282 LLIFDEVMT-GF-RLAYGGAQEYFGVTPDLTTLG----KIIGGGLPVGAYGGR-RDIMEMVAP---AGPM---------Y 342 (476)
Q Consensus 282 llI~DEv~~-g~-r~g~~~~~~~~g~~pDi~t~s----K~lg~G~~iG~~~~~-~~i~~~l~~---~~~~---------~ 342 (476)
+||+|++|+ |. ..+ ...+...|+.++| |.+++| +.|+++.+ +++.+.+.. .+.. .
T Consensus 135 ~li~D~a~~~g~~~~~-----~~~~~~~d~~~~S~~~~K~~~~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (352)
T cd00616 135 PVIEDAAQALGATYKG-----RKVGTFGDAGAFSFHPTKNLTTG-EGGAVVTNDEELAERARLLRNHGRDRDRFKYEHEI 208 (352)
T ss_pred eEEEECCCCCCCeECC-----EEcccCcceeEEcCCCCCCCccc-CceEEEECCHHHHHHHHHHHHcCCCCCCCccccce
Confidence 999999995 32 111 1123234655544 999643 56777665 577665432 1110 0
Q ss_pred ccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCceEee---eeceeEEEEEecCCCcCchhh
Q 011856 343 QAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGG---YISGMFGFFFTEGPVYNFEDA 419 (476)
Q Consensus 343 ~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~---~~g~~~~i~~~~~~~~~~~~~ 419 (476)
...++..+++.++.++..++.+ +...++.+++.+++++.|.++. ...+..... ....++.+.+.+..
T Consensus 209 ~~~~~~~~~~~aa~~~~~l~~~--~~~~~~~~~~~~~~~~~L~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~------- 278 (352)
T cd00616 209 LGYNYRLSEIQAAIGLAQLEKL--DEIIARRREIAERYKELLADLP-GIRLPDVPPGVKHSYHLYVIRLDPEA------- 278 (352)
T ss_pred eeeccCcCHHHHHHHHHHHHhh--HHHHHHHHHHHHHHHHHhcCCC-CccCCCCCCCCceeeEEEEEEECCcC-------
Confidence 1123345677777776665544 4567778888888888887641 111111111 12334444443100
Q ss_pred cccchHHHHHHHHHHHHCCeEeccCCC---------------------------cceEEe--CCCcHHHHHHHHHHHH
Q 011856 420 KKSETTKFARFYRGMLEEGVYFAPSQF---------------------------EAGFTS--LAHSSDDIQHTITAAE 468 (476)
Q Consensus 420 ~~~~~~~~~~~~~~l~~~Gv~~~~~~~---------------------------~~~~~~--~~~t~e~i~~~~~~l~ 468 (476)
.....++.+.|.++||.+..... ..++++ ...|++|++.++++|+
T Consensus 279 ----~~~~~~v~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 279 ----GESRDELIEALKEAGIETRVHYPPLHHQPPYKKLLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred ----CCCHHHHHHHHHHCCCCeeeecCccccCHhhhhccCCCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence 11235788899999996642211 134554 4579999999998874
No 260
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.75 E-value=2.5e-15 Score=149.84 Aligned_cols=214 Identities=15% Similarity=0.145 Sum_probs=137.9
Q ss_pred CHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccc-cCccccccchhhccC--CCCc
Q 011856 232 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM-TGFRLAYGGAQEYFG--VTPD 308 (476)
Q Consensus 232 d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~-~g~r~g~~~~~~~~g--~~pD 308 (476)
|.+++++++++ .+..|++....+.++ ..| +++|+++|++||++|++|++| .|+..+..+. +.++ -..|
T Consensus 208 D~d~l~~~~~~---~~plvii~g~S~~~~-~~d----l~~i~eia~~~gA~L~VD~AH~~Gligg~~~~-~~~~~~~~~D 278 (493)
T PRK13580 208 DYDEIAALARE---FKPLILVAGYSAYPR-RVN----FAKLREIADEVGAVLMVDMAHFAGLVAGKVFT-GDEDPVPHAD 278 (493)
T ss_pred CHHHHHHHHhh---cCCEEEEeCccccCC-CcC----HHHHHHHHHHcCCEEEEECchhhceeccccch-hhcCCCCCCc
Confidence 78999999975 344555555544444 667 999999999999999999999 5662222221 1111 1357
Q ss_pred hh--hhhhhcCCCCcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCC---CHHHHHHHHHHHHHHH
Q 011856 309 LT--TLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEP---GTYEYLNKITGELTQG 383 (476)
Q Consensus 309 i~--t~sK~lg~G~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~---~~~~~~~~~~~~l~~~ 383 (476)
++ |++|+|.| -+.|++++++++.+.+....+ +.+++ ..+|..++++. ++..+.++ ++.+++.++.++|++.
T Consensus 279 ~vtgT~hKaL~G-P~GG~I~~~~~l~~~L~~a~P-~i~gg-~l~p~iAA~av-Al~e~~~~ef~~y~~~l~~Na~~La~~ 354 (493)
T PRK13580 279 IVTTTTHKTLRG-PRGGLVLAKKEYADAVDKGCP-LVLGG-PLPHVMAAKAV-ALAEARTPEFQKYAQQVVDNARALAEG 354 (493)
T ss_pred EEEeCChhhccC-CCeEEEEecHHHHHHHhhCCC-cccCC-CccHHHHHHHH-HHHHHhCccHHHHHHHHHHHHHHHHHH
Confidence 65 68899954 246788889999988854333 33333 33343333344 45555433 3789999999999999
Q ss_pred HHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCC----------cceEEe-
Q 011856 384 IIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF----------EAGFTS- 452 (476)
Q Consensus 384 L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~----------~~~~~~- 452 (476)
|.+.+.+. .. -.....++.+.+.+. ......+.+.|.+.||++.+... ..+|++
T Consensus 355 L~~~G~~v--v~-ggTdshIV~V~lg~~------------~~~g~~a~~~L~e~GI~vn~i~~Ptvp~g~~~~srLRIg~ 419 (493)
T PRK13580 355 FLKRGARL--VT-GGTDNHLVLIDVTSF------------GLTGRQAESALLDAGIVTNRNSIPSDPNGAWYTSGIRLGT 419 (493)
T ss_pred HHhcCCCc--cC-CCCCCCEEEEEeCCH------------HHHHHHHHHHHHHCCeEEccccCCCCCCCCCCCceEEecc
Confidence 98864322 10 012345666666421 11223566788999999875432 235663
Q ss_pred -C----CCcHHHHHHHHHHHHHHHHH
Q 011856 453 -L----AHSSDDIQHTITAAEKVKMR 473 (476)
Q Consensus 453 -~----~~t~e~i~~~~~~l~~~~~~ 473 (476)
. .++++|++++++.|.++++.
T Consensus 420 ~A~ttrg~teedi~~iad~l~~~l~~ 445 (493)
T PRK13580 420 PALTTLGMGSDEMDEVAELIVKVLSN 445 (493)
T ss_pred chhhhcCCCHHHHHHHHHHHHHHHHh
Confidence 2 56799999999999988763
No 261
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.74 E-value=5.8e-16 Score=154.26 Aligned_cols=310 Identities=18% Similarity=0.176 Sum_probs=200.2
Q ss_pred CCCcHHHHHHHHHHHHhcCCC---CC------CCHHHHHHHHHHHhhCC-CC-CeEEEeCCHHHHHHHHHHHHHh-ccCC
Q 011856 114 GHADDQVLAALGETMKKGTSF---GA------PCLLENVLAEMVISAVP-SI-EMVRFVNSGTEACMGVLRLARA-FTGR 181 (476)
Q Consensus 114 G~~~p~v~~a~~~~l~~~~~~---~~------~~~~~~~la~~l~~~~~-~~-e~v~~~~sGseA~~~al~~ar~-~~~~ 181 (476)
|..++.|.+++.+.+...... +. ..+...+..+.++++++ .. +.|+|++|++++++.++..... ..++
T Consensus 9 ~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~~~~v~~~~~~t~a~~~~~~~l~~~~~~g 88 (371)
T PF00266_consen 9 GPMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLGAPPDEEVVFTSNGTEALNAVASSLLNPLKPG 88 (371)
T ss_dssp -B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSSTTEEEEEESSHHHHHHHHHHHHHHHGTTT
T ss_pred cCCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcCCccccccccccccchhhhhhhhccccccccc
Confidence 557899999999988752111 11 12445677788888886 44 6899999999999999996532 4677
Q ss_pred ceEEEEeCCCCCCchhHHhh---cCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCC
Q 011856 182 ERIIKFEGCYHGHADPFLVK---AGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGN 258 (476)
Q Consensus 182 ~~ii~~~~~yhg~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~ 258 (476)
++|++....|++........ .|..+...+.+.. + .-|++++++.+. +++++|.+..+.+.
T Consensus 89 ~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~~-~-------------~~~~~~~~~~l~---~~~~lv~~~~~~~~ 151 (371)
T PF00266_consen 89 DEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPADPG-G-------------SLDLEDLEEALN---PDTRLVSISHVENS 151 (371)
T ss_dssp CEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEGTT-S-------------SCSHHHHHHHHH---TTESEEEEESBETT
T ss_pred cccccccccccccccccccccccchhhhcccccccc-c-------------hhhhhhhhhhhc---cccceEEeeccccc
Confidence 88988888887765333222 2333222111111 1 117899999997 37899999999999
Q ss_pred CCcccCCHHHHHHHHHHHHHhCCEEEEeccccCccccccchhhccCCCCchhhh--hhhcCCCCcEEEEEecHHHHHhhc
Q 011856 259 SGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTL--GKIIGGGLPVGAYGGRRDIMEMVA 336 (476)
Q Consensus 259 ~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pDi~t~--sK~lg~G~~iG~~~~~~~i~~~l~ 336 (476)
+|.+.| +++|.++|+++|+++++|-+|+ + |.. ..+.-...+|++++ -| |+|+-.+|++..+++.++.+.
T Consensus 152 tG~~~p----i~~I~~~~~~~~~~~~vD~~~~-~--g~~-~id~~~~~~D~~~~s~~K-l~gp~G~g~l~v~~~~~~~~~ 222 (371)
T PF00266_consen 152 TGVRNP----IEEIAKLAHEYGALLVVDAAQS-A--GCV-PIDLDELGADFLVFSSHK-LGGPPGLGFLYVRPEAIERLR 222 (371)
T ss_dssp TTBBSS----HHHHHHHHHHTTSEEEEE-TTT-T--TTS-S--TTTTTESEEEEESTS-TTSSSTEEEEEEEHHHHHHHH
T ss_pred ccEEee----eceehhhhhccCCceeEechhc-c--ccc-cccccccccceeeecccc-cCCCCchhhheehhhhhhccc
Confidence 999999 9999999999999999999995 1 110 11112234687754 49 887666899999999988885
Q ss_pred CCCCccc------------------cCCCCCcHHHHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHHHHHHhhhcC-Cc
Q 011856 337 PAGPMYQ------------------AGTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAG-HA 394 (476)
Q Consensus 337 ~~~~~~~------------------~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~-~~ 394 (476)
+...... +..-+.|.+...+...+++.+.+ ++..++..++.+++++.|.++..-.. .+
T Consensus 223 p~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~~~ 302 (371)
T PF00266_consen 223 PAKPGGGYLDFPSLQEYGLADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIRERIRELAEYLREALEELPGIEVLGP 302 (371)
T ss_dssp TSSSSSSTTTHHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTEEESSS
T ss_pred cccccccccccccchhcccccccccccccceeeehhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhcCCceeEeee
Confidence 4211000 00002456666677778887743 55667777777777777776421100 01
Q ss_pred eEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCC------------cceEEe--CCCcHHHH
Q 011856 395 ICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF------------EAGFTS--LAHSSDDI 460 (476)
Q Consensus 395 ~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~------------~~~~~~--~~~t~e~i 460 (476)
..-...+.++.+.+... ....+.+.|.++||.+..+.. ..+|++ ...|++||
T Consensus 303 ~~~~~~~~i~~~~~~~~--------------~~~~~~~~L~~~~I~~~~G~~~~~~~~~~~~~~~~iRvS~~~~nt~~dv 368 (371)
T PF00266_consen 303 DDEPRRPSIVSFNLPGS--------------DADDVVKYLEERGIAVSTGSACAGPSLDILGMGGVIRVSLHYYNTEEDV 368 (371)
T ss_dssp SCGGBGTTEEEEEETTS--------------SHHHHHHHHHHHTEEEEESTTTCHHHHHHHHTTTEEEEE-GTTSSHHHH
T ss_pred cccccccceEEEeecCC--------------CHHHHHHHHhhcCEEEeccCcccHHHHHHhCCCCEEEEeccCCCCHHHH
Confidence 11233566667766321 125778888888999887421 356764 66799999
Q ss_pred HHH
Q 011856 461 QHT 463 (476)
Q Consensus 461 ~~~ 463 (476)
|++
T Consensus 369 ~~l 371 (371)
T PF00266_consen 369 DRL 371 (371)
T ss_dssp HHH
T ss_pred hhC
Confidence 875
No 262
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.74 E-value=1.7e-16 Score=157.83 Aligned_cols=238 Identities=16% Similarity=0.142 Sum_probs=154.7
Q ss_pred CCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCC
Q 011856 136 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 215 (476)
Q Consensus 136 ~~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~ 215 (476)
+.++...+|.+.++++. +.+.+++++||++|+..+++.. ...+++|++.. ..|+.+...+...-. ..
T Consensus 51 ~~~p~~~~le~~la~l~-g~~~~~~~~sG~~Ai~~al~al--~~~Gd~Vl~~~-~~~~~t~~~~~~~~~---------~~ 117 (380)
T TIGR01325 51 YANPTVAAFEERIAALE-GAERAVATATGMSAIQAALMTL--LQAGDHVVASR-SLFGSTVGFISEILP---------RF 117 (380)
T ss_pred CCCchHHHHHHHHHHHh-CCCcEEEECCHHHHHHHHHHHH--hCCCCEEEEec-CCcchHHHHHHHHHH---------Hh
Confidence 45666788889898887 5578899999999999999742 33456676654 445544332211000 00
Q ss_pred CCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccc
Q 011856 216 GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLA 295 (476)
Q Consensus 216 ~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g 295 (476)
+ .++..++.+|++++++.++. ++++|++|.++++.|.+.+ +++|.++|+++|++||+||+|..+..
T Consensus 118 g------~~v~~v~~~d~~~l~~~i~~---~tklV~le~p~np~g~~~d----l~~I~~la~~~gi~livD~a~~~~~~- 183 (380)
T TIGR01325 118 G------IEVSFVDPTDLNAWEAAVKP---NTKLVFVETPSNPLGELVD----IAALAELAHAIGALLVVDNVFATPVL- 183 (380)
T ss_pred C------CEEEEECCCCHHHHHHhcCC---CceEEEEECCCCCCCeeeC----HHHHHHHHHHcCCEEEEECCCccccc-
Confidence 1 13455666789999888863 5789999988888898888 99999999999999999999953210
Q ss_pred ccchhhccCCCCchh--hhhhhcCC-CCcE-EEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHHH
Q 011856 296 YGGAQEYFGVTPDLT--TLGKIIGG-GLPV-GAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYE 371 (476)
Q Consensus 296 ~~~~~~~~g~~pDi~--t~sK~lg~-G~~i-G~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~ 371 (476)
.......+|++ +++|.+++ |.++ |++++++++++.++... ... ....+|..+..++..++.+ +...+
T Consensus 184 ----~~pl~~g~Divv~S~sK~l~g~g~~~gG~vv~~~~~~~~l~~~~--~~~-g~~~~p~~a~~~l~~l~tl--~~r~~ 254 (380)
T TIGR01325 184 ----QQPLKLGADVVVYSATKHIDGQGRVMGGVIAGSEELMAEVAVYL--RHT-GPAMSPFNAWVLLKGLETL--SLRMQ 254 (380)
T ss_pred ----CCchhhCCCEEEeeccceecCCCCeEEEEEEeCHHHHHHHHHHH--Hhh-CCCCCHHHHHHHHhccCcH--HHHHH
Confidence 11122346776 58999996 6665 66788888877765311 111 1234556655555555443 33556
Q ss_pred HHHHHHHHHHHHHHHHhh--h--cCC-c---------eEeeeeceeEEEEEe
Q 011856 372 YLNKITGELTQGIIDAGK--K--AGH-A---------ICGGYISGMFGFFFT 409 (476)
Q Consensus 372 ~~~~~~~~l~~~L~~~~~--~--~~~-~---------~~v~~~g~~~~i~~~ 409 (476)
+..++...+.+.|++... . +|. . ....+.|.|+.|++.
T Consensus 255 ~~~~~a~~la~~L~~~p~v~~V~yp~l~s~~~~~~~~~~~~g~g~~~s~~l~ 306 (380)
T TIGR01325 255 KQFDSALAIAEWLQAQPQVQAVYYPGLPDHPQHELARRQQSGGGTVIGFDVA 306 (380)
T ss_pred HHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEC
Confidence 667777777777765320 0 111 1 012467889999985
No 263
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.74 E-value=5.2e-16 Score=155.26 Aligned_cols=291 Identities=13% Similarity=0.069 Sum_probs=182.3
Q ss_pred CCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCC
Q 011856 136 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 215 (476)
Q Consensus 136 ~~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~ 215 (476)
++++...+|.+.++++.+ .+.+++++||++|+..++.. ....++.|++..+.|.. +.......-
T Consensus 61 ~~~p~~~~Le~~iA~~~g-~~~~l~~~sG~~Ai~~al~~--ll~~Gd~Vl~~~~~y~~-~~~~~~~~~------------ 124 (400)
T PRK06234 61 LGNPTSTEVENKLALLEG-GEAAVVAASGMGAISSSLWS--ALKAGDHVVASDTLYGC-TFALLNHGL------------ 124 (400)
T ss_pred CCCccHHHHHHHHHHHhC-CCcEEEEcCHHHHHHHHHHH--HhCCCCEEEEecCccch-HHHHHHHHH------------
Confidence 356667889999998884 56789999999999988873 23455677776655543 333221100
Q ss_pred CCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHh--CCEEEEeccccCcc
Q 011856 216 GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKEN--GALLIFDEVMTGFR 293 (476)
Q Consensus 216 ~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~--g~llI~DEv~~g~r 293 (476)
...+.++..++.+|++++++.++. ++++|++|.++|++|.+.+ +++|.++|+++ |+++|+||+|....
T Consensus 125 ---~~~G~~v~~vd~~d~e~l~~~i~~---~tklI~iesP~NPtG~v~d----l~~I~~la~~~~~~i~livDea~~~~~ 194 (400)
T PRK06234 125 ---TRYGVEVTFVDTSNLEEVRNALKA---NTKVVYLETPANPTLKVTD----IKAISNIAHENNKECLVFVDNTFCTPY 194 (400)
T ss_pred ---hhCCeEEEEECCCCHHHHHHHhcc---CCeEEEEECCCCCCCCcCC----HHHHHHHHHhcCCCCEEEEECCCCchh
Confidence 001123555566689999999864 5788999988888999888 99999999997 99999999995321
Q ss_pred ccccchhhccCCCCchh--hhhhhcCC-CCcE-EEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCH
Q 011856 294 LAYGGAQEYFGVTPDLT--TLGKIIGG-GLPV-GAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGT 369 (476)
Q Consensus 294 ~g~~~~~~~~g~~pDi~--t~sK~lg~-G~~i-G~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~ 369 (476)
.+. ..+...|++ +++|.+++ |+++ |++++++++++.++....... .+...+|..+..++..|+.+ +..
T Consensus 195 ~~~-----~l~~g~Divv~S~sK~l~g~g~~~gG~v~~~~~~~~~l~~~~~~~~-~g~~l~p~~a~l~~~~l~tl--~~r 266 (400)
T PRK06234 195 IQR-----PLQLGADVVVHSATKYLNGHGDVIAGFVVGKEEFINQVKLFGIKDM-TGSVIGPFEAFLIIRGMKTL--QIR 266 (400)
T ss_pred cCC-----chhhCCcEEEeeccccccCCCCceeEEEEecHHHHHHHHHHHHHHh-cCCCCCHHHHHHHHhccCcH--HHH
Confidence 111 112234655 68899985 7765 888999998887753111111 23456777777766665433 445
Q ss_pred HHHHHHHHHHHHHHHHHHhh----hcCC-c---------eEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHH
Q 011856 370 YEYLNKITGELTQGIIDAGK----KAGH-A---------ICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML 435 (476)
Q Consensus 370 ~~~~~~~~~~l~~~L~~~~~----~~~~-~---------~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 435 (476)
.++..++..++.+.|++... .+|. . ....+.|.|+.|++... .+...+|.+.|.
T Consensus 267 ~~~~~~na~~~a~~L~~~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l~~~------------~~~~~~f~~~l~ 334 (400)
T PRK06234 267 MEKHCKNAMKVAKFLESHPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKGG------------VEEGKVVMNNVK 334 (400)
T ss_pred HHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEecCc------------HHHHHHHHHhCC
Confidence 66667777777777764310 0110 0 01235678888888531 122355666655
Q ss_pred HCCeEeccCCC---------------------------cceEEeCCCcHHHHHHHHHHHHHHHHHh
Q 011856 436 EEGVYFAPSQF---------------------------EAGFTSLAHSSDDIQHTITAAEKVKMRF 474 (476)
Q Consensus 436 ~~Gv~~~~~~~---------------------------~~~~~~~~~t~e~i~~~~~~l~~~~~~~ 474 (476)
--++-..-++. +.+|++... |+.+.+++-|+++++.+
T Consensus 335 ~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGl--E~~~dl~~dl~~al~~~ 398 (400)
T PRK06234 335 LATLAVSLGDAETLIQHPASMTHSPYTAEERKEAGISDGLVRLSVGL--EDVDDIIADLKQALDLI 398 (400)
T ss_pred cceEeccCCCCCceecCCccCCCCCCCHHHHHhcCCCCCeEEEEeCC--CCHHHHHHHHHHHHHHH
Confidence 43332222211 123555444 46777788888877764
No 264
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.73 E-value=6.7e-16 Score=153.97 Aligned_cols=238 Identities=16% Similarity=0.150 Sum_probs=158.9
Q ss_pred CCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCC
Q 011856 136 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 215 (476)
Q Consensus 136 ~~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~ 215 (476)
+.++...+|.++++++. +.+.+++++||++|+..++.. ....++.||+..+.|++.......... ..
T Consensus 61 ~~~p~~~~le~~lA~l~-g~~~~i~~ssG~~Ai~~~l~a--ll~~GD~Vi~~~~~y~~~~~~~~~~~~----------~~ 127 (398)
T PRK08249 61 NTNPTVQAFEEKVRILE-GAEAATAFSTGMAAISNTLYT--FLKPGDRVVSIKDTYGGTNKIFTEFLP----------RM 127 (398)
T ss_pred CCChHHHHHHHHHHHHh-CCCeEEEeCChHHHHHHHHHH--hcCCCCEEEEcCCchHHHHHHHHHHHh----------hC
Confidence 45677788899998888 567788999999999999874 234567888888888763221111000 00
Q ss_pred CCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccc
Q 011856 216 GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLA 295 (476)
Q Consensus 216 ~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g 295 (476)
| .++..++..|++++++.++. ++++|++|.++|++|.+.+ +++|.++|++||+++|+|++|..+...
T Consensus 128 G------i~v~~vd~~d~e~l~~~i~~---~tklV~ie~p~NPtg~v~d----l~~I~~la~~~gi~livD~t~a~~~~~ 194 (398)
T PRK08249 128 G------VDVTLCETGDHEQIEAEIAK---GCDLLYLETPTNPTLKIVD----IERLAAAAKKVGALVVVDNTFATPINQ 194 (398)
T ss_pred C------eEEEEcCCCCHHHHHHhcCC---CCeEEEEECCCCCCCccCC----HHHHHHHHHHcCCEEEEECCcCccccC
Confidence 1 12334455589999999864 5788988888888999998 999999999999999999999633111
Q ss_pred ccchhhccCCCCchh--hhhhhcCC-CCcE-EEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHHH
Q 011856 296 YGGAQEYFGVTPDLT--TLGKIIGG-GLPV-GAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYE 371 (476)
Q Consensus 296 ~~~~~~~~g~~pDi~--t~sK~lg~-G~~i-G~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~ 371 (476)
. ......|++ +++|.+++ |.++ |++++++++++.+... ........++..+..++..++.+ +...+
T Consensus 195 ~-----~l~~~~Divv~S~sK~l~g~~~~~gG~vv~~~~l~~~l~~~---~~~~g~~~s~~~a~l~l~~l~tL--~~R~~ 264 (398)
T PRK08249 195 N-----PLALGADLVIHSATKFLSGHADALGGVVCGSKELMEQVYHY---REINGATMDPMSAYLILRGMKTL--KLRVR 264 (398)
T ss_pred C-----chhhCCCEEeccCceecCCCCCceEEEEECCHHHHHHHHHH---HHhcCCCCCHHHHHHHHhCcchH--HHHHH
Confidence 1 112234554 68899985 5565 6667888888877531 12223456788777777777655 34456
Q ss_pred HHHHHHHHHHHHHHHHhh----hcC-Cc---------eEeeeeceeEEEEEe
Q 011856 372 YLNKITGELTQGIIDAGK----KAG-HA---------ICGGYISGMFGFFFT 409 (476)
Q Consensus 372 ~~~~~~~~l~~~L~~~~~----~~~-~~---------~~v~~~g~~~~i~~~ 409 (476)
+..++...+.+.|++... .|| +. ....+.|.|+.|++.
T Consensus 265 ~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~sf~~~ 316 (398)
T PRK08249 265 QQQESAMALAKYLQTHPKVEAVYYPGLETHPNHEIAKAQMRGFGGILSFVLK 316 (398)
T ss_pred HHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEEc
Confidence 666777777777765310 011 10 012467889999985
No 265
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.73 E-value=1.7e-15 Score=150.82 Aligned_cols=308 Identities=11% Similarity=0.019 Sum_probs=186.1
Q ss_pred HHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchh
Q 011856 118 DQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADP 197 (476)
Q Consensus 118 p~v~~a~~~~l~~~~~~~~~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~ 197 (476)
++-.+++.+.+..+..++ ..+...++++++++++ +.+++++++||++|+..+++.+ ....++.||+...+|.+.. .
T Consensus 11 ~~~~~~~~~~l~~~~~~g-~~~~~~~~e~~la~~~-g~~~~v~~~sgt~al~~~l~~~-~~~~Gd~Viv~~~t~~~~~-~ 86 (375)
T PRK11706 11 GTELDYIQQAMSSGKLCG-DGGFTRRCQQWLEQRF-GSAKVLLTPSCTAALEMAALLL-DIQPGDEVIMPSYTFVSTA-N 86 (375)
T ss_pred HHHHHHHHHHHHcCCccC-CCHHHHHHHHHHHHHh-CCCeEEEECCHHHHHHHHHHHh-CCCCCCEEEECCCCcHHHH-H
Confidence 444677888777764332 3566788888888887 6789999999999999988742 2345677888777777643 3
Q ss_pred HHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHH
Q 011856 198 FLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITK 277 (476)
Q Consensus 198 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~ 277 (476)
.+...|..+...+... .+. ..|++++++.++. ++++|++.. ..|...+ +++|.++|+
T Consensus 87 ~~~~~G~~~v~~d~d~-~~~------------~~d~~~le~~i~~---~tk~i~~~~---~~G~~~~----~~~i~~la~ 143 (375)
T PRK11706 87 AFVLRGAKIVFVDIRP-DTM------------NIDETLIEAAITP---KTRAIVPVH---YAGVACE----MDTIMALAK 143 (375)
T ss_pred HHHHcCCEEEEEecCC-CcC------------CcCHHHHHHhcCC---CCeEEEEeC---CCCCccC----HHHHHHHHH
Confidence 3444444332221110 000 1278999998864 456666432 3566666 899999999
Q ss_pred HhCCEEEEeccccCc-cccccchhhccCCCCchhhhh----hhcCCCCcEEEEEecHHHHHhhcC---CCC----c----
Q 011856 278 ENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLG----KIIGGGLPVGAYGGRRDIMEMVAP---AGP----M---- 341 (476)
Q Consensus 278 ~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pDi~t~s----K~lg~G~~iG~~~~~~~i~~~l~~---~~~----~---- 341 (476)
+||++||+|++|+-. ..+.. ..|-.-|+.+|| |.++.|.+.+++..++++.+.++. .+. .
T Consensus 144 ~~~i~vIeD~a~a~g~~~~~~----~~g~~~~~~~~Sf~~~K~l~~g~gG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 219 (375)
T PRK11706 144 KHNLFVVEDAAQGVMSTYKGR----ALGTIGHIGCFSFHETKNYTAGEGGALLINDPALIERAEIIREKGTNRSQFFRGQ 219 (375)
T ss_pred HcCCEEEEECccccccccCCe----eeecCcCEEEEeCCCCccccccCCeEEEECCHHHHHHHHHHHHcCCCcchhhccC
Confidence 999999999999522 21111 112223677777 999877777777777888765431 110 0
Q ss_pred -------cccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhh----hcC-CceEeeeeceeEEEEEe
Q 011856 342 -------YQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGK----KAG-HAICGGYISGMFGFFFT 409 (476)
Q Consensus 342 -------~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~----~~~-~~~~v~~~g~~~~i~~~ 409 (476)
..+.++-.+.+.++.+++.|+.+ ++..++.+++.+++.+.|..+.. ..+ .+........++++.+.
T Consensus 220 ~~~~~~~~~g~~~~~~~~~aa~~~~ql~~l--~~~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (375)
T PRK11706 220 VDKYTWVDIGSSYLPSELQAAYLWAQLEAA--DRINQRRLALWQRYYDALAPLAEAGRIELPSIPDDCKHNAHMFYIKLR 297 (375)
T ss_pred CCcceeeecccccCcCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhcCCCcCCeeecCCCCCCCceeeEEEEEEEC
Confidence 01122233456666666666654 44556666677777777765421 001 01011112223444442
Q ss_pred cCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCC------------------C--------cceEEe--CCCcHHHHH
Q 011856 410 EGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ------------------F--------EAGFTS--LAHSSDDIQ 461 (476)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~------------------~--------~~~~~~--~~~t~e~i~ 461 (476)
. .....++.+.|.++||.+.... . ..+.++ ...+++|++
T Consensus 298 ~-------------~~~r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~~~~ 364 (375)
T PRK11706 298 D-------------LEDRSALINFLKEAGIMAVFHYIPLHSSPAGERFGRFHGEDRYTTKESERLLRLPLFYNLTDVEQR 364 (375)
T ss_pred C-------------cCCHHHHHHHHHHCCCCccccCCccCcchhhHhcCCCCCCChHHHHHHhCcEeccCCCCCCHHHHH
Confidence 1 1123688899999999754211 0 012333 346899999
Q ss_pred HHHHHHHHHH
Q 011856 462 HTITAAEKVK 471 (476)
Q Consensus 462 ~~~~~l~~~~ 471 (476)
..++.|++++
T Consensus 365 ~i~~~i~~~~ 374 (375)
T PRK11706 365 TVIDTILEFF 374 (375)
T ss_pred HHHHHHHHHh
Confidence 9999998864
No 266
>PRK06460 hypothetical protein; Provisional
Probab=99.73 E-value=6.9e-16 Score=153.06 Aligned_cols=234 Identities=14% Similarity=0.138 Sum_probs=147.9
Q ss_pred CCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhH---HhhcCCCCccCCCCC
Q 011856 137 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPF---LVKAGSGVATLGLPD 213 (476)
Q Consensus 137 ~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~---~~~~g~~~~~~~~~~ 213 (476)
.++...+|.++++++.+. +..++++||++|+..++... ...+++|++..+.|.+.+... +...|.
T Consensus 43 ~~p~~~~L~~~lA~l~g~-~~~v~~~sG~~ai~~~l~al--~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~--------- 110 (376)
T PRK06460 43 ANPTVLELTKKIVELENA-EMGVAFSSGMGAISTTALAL--LKPGNSVLVHRDMFGRSYRFFTDYLKNWGV--------- 110 (376)
T ss_pred CCccHHHHHHHHHHHhCC-CcEEEeCCHHHHHHHHHHHH--hCCCCEEEEecCCcCcHHHHHHHHHHhhCc---------
Confidence 455667888888888743 44556688999999888732 334567777665554432211 111121
Q ss_pred CCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcc
Q 011856 214 SPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFR 293 (476)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r 293 (476)
.+..++.++.+.++++++ +++++|+++.++|++|.+.+ +++|.++|++||+++|+||+|....
T Consensus 111 ----------~v~~~~~~~~~~l~~~~~---~~tklV~l~sp~NPtG~v~d----~~~I~~la~~~g~~vivDea~~~~~ 173 (376)
T PRK06460 111 ----------NVDASNPGSDNIIEKAKS---KRYDVVFVENITNPLLRVVD----ITELSKVCKENGSILIVDATFSTPI 173 (376)
T ss_pred ----------EEEEECCCCHHHHHHhcC---CCceEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEEEECCcCccc
Confidence 244445555555655543 36788999998889999999 8899999999999999999995321
Q ss_pred ccccchhhccCCCCchh--hhhhhcCC--CCcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCH
Q 011856 294 LAYGGAQEYFGVTPDLT--TLGKIIGG--GLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGT 369 (476)
Q Consensus 294 ~g~~~~~~~~g~~pDi~--t~sK~lg~--G~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~ 369 (476)
.. .......|++ ++||.++| +.++|++++++++++.+.... ...+.+.+|..+..++..++.+ +..
T Consensus 174 ~~-----~~l~~~~divv~S~sK~l~G~~~~~~G~~~~~~~l~~~l~~~~---~~~g~~~~~~~a~~~l~~~~~l--~~r 243 (376)
T PRK06460 174 NQ-----KPLELGADIVVHSASKFLAGHNDVIAGLAAGYGKLLNVIDQMR---RTLGTSLDPHAAYLTLRGIKTL--KIR 243 (376)
T ss_pred cC-----ChhhcCCCEEEeecceeccCCCCceEEEEecCHHHHHHHHHHH---HhcCCCCCHHHHHHHHhchhhH--HHH
Confidence 11 1111124655 79999974 367999999999988776311 1112234555444444444433 355
Q ss_pred HHHHHHHHHHHHHHHHHHhh----hcC-Cc---------eEeeeeceeEEEEEe
Q 011856 370 YEYLNKITGELTQGIIDAGK----KAG-HA---------ICGGYISGMFGFFFT 409 (476)
Q Consensus 370 ~~~~~~~~~~l~~~L~~~~~----~~~-~~---------~~v~~~g~~~~i~~~ 409 (476)
.+++.++.+++.+.|++... .+| +. ....+.|.|+.|++.
T Consensus 244 ~~~~~~n~~~l~~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~s~~~~ 297 (376)
T PRK06460 244 MDVINRNAEQIAEFLEGHPKVVKVYYPGLKSHVDYEIARRVLKGFGGVLSFEVN 297 (376)
T ss_pred HHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEc
Confidence 67788888888888876410 011 00 012467899999985
No 267
>PRK07049 methionine gamma-lyase; Validated
Probab=99.73 E-value=1.1e-15 Score=153.82 Aligned_cols=237 Identities=19% Similarity=0.175 Sum_probs=156.7
Q ss_pred CCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHH---hhcCCCCccCCCC
Q 011856 136 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFL---VKAGSGVATLGLP 212 (476)
Q Consensus 136 ~~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~---~~~g~~~~~~~~~ 212 (476)
++++....|.+.++++. +.+.+++++||++|+..++.. ....++.|++.++.|.+....+. ...|..
T Consensus 80 ~~~Pt~~~Le~~lA~le-g~~~~iv~~sG~~Ai~~~l~a--l~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi~------- 149 (427)
T PRK07049 80 FNHPNSEIVEDRLAVYE-GAESAALFSSGMSAIATTLLA--FVRPGDVILHSQPLYGGTETLLAKTFRNFGVG------- 149 (427)
T ss_pred CCCcCHHHHHHHHHHHh-CCCcEEEEccHHHHHHHHHHH--HhCCCCEEEEcCCCcccHHHHHHHHHHhcCcE-------
Confidence 45555678888888888 567899999999999988874 23456778888888888543321 111221
Q ss_pred CCCCCCCCCCCceeecc-CCCHHHHHHHHhcC--CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHH------hCCEE
Q 011856 213 DSPGVPKGATYETLTAP-FNDVSALENLFENN--KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKE------NGALL 283 (476)
Q Consensus 213 ~~~~~~~~~~~~~~~~~-~~d~~~le~~l~~~--~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~------~g~ll 283 (476)
++.++ ..|.+++++.+.+. .+++++|++|.++|++|.+.+ +++|.+++++ +++++
T Consensus 150 ------------~v~~~~~~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d----~~~l~~la~~~~~~~~~~~~v 213 (427)
T PRK07049 150 ------------AVGFADGLSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVD----VAAVRRVADAIEARQGHRPII 213 (427)
T ss_pred ------------EEEEeCCCCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccC----HHHHHHHHHHhhhcccCCCEE
Confidence 12222 23678888777531 136789999988888999988 6666666666 89999
Q ss_pred EEeccccCc-cccccchhhccCCCCchh--hhhhhcC--CCCcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHH
Q 011856 284 IFDEVMTGF-RLAYGGAQEYFGVTPDLT--TLGKIIG--GGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGI 358 (476)
Q Consensus 284 I~DEv~~g~-r~g~~~~~~~~g~~pDi~--t~sK~lg--~G~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~ 358 (476)
|+||+|.++ .... .+ ++ .|++ ++||.++ +|+|+||+++++++++.+... ......+.+|+.+.+++
T Consensus 214 vvDety~~~~~~~p---l~-~g--~divv~S~SK~~gG~~glr~G~vv~~~~l~~~l~~~---~~~~g~~ls~~~a~l~~ 284 (427)
T PRK07049 214 ACDNTLLGPVFQKP---LE-HG--ADLSVYSLTKYVGGHSDLVAGAVLGRKALIRQVRAL---RSAIGTQLDPHSCWMLG 284 (427)
T ss_pred EEECCccccccCCc---cc-cC--CCEEEEcCceeecCCCCcEEEEEECCHHHHHHHHHH---HHhcCCCCCHHHHHHHH
Confidence 999998654 2111 11 12 4655 7999999 479999999999988877631 11122356788888777
Q ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHhh----hcC-C--ce---------EeeeeceeEEEEEe
Q 011856 359 HTLKRLKEPGTYEYLNKITGELTQGIIDAGK----KAG-H--AI---------CGGYISGMFGFFFT 409 (476)
Q Consensus 359 aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~----~~~-~--~~---------~v~~~g~~~~i~~~ 409 (476)
..|+.+ ...+++..++...+.+.|++... .+| . .. ...+.|.|+.|++.
T Consensus 285 r~L~tl--~~R~~~~~~~a~~la~~L~~~p~V~~v~yp~~l~~~~~~~~~~~~~~~g~g~~~s~~~~ 349 (427)
T PRK07049 285 RSLETL--VLRMERANRNARAVAEFLRDHPKVEKLHYLPFLDPDSAYGAVYKRQCTGAGSTFSFDIK 349 (427)
T ss_pred cCCChH--HHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCCCccHHHHHhhCCCCccEEEEEEc
Confidence 766543 33445566777777777775411 112 1 10 12356889999985
No 268
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.73 E-value=7.6e-16 Score=152.89 Aligned_cols=237 Identities=14% Similarity=0.119 Sum_probs=157.6
Q ss_pred CCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCC
Q 011856 136 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 215 (476)
Q Consensus 136 ~~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~ 215 (476)
++++...+|.+.++++. +.+++++++||++|+..++... ..+++.|++..++|.+.........+....
T Consensus 48 ~~~p~~~~le~~lA~l~-g~~~v~~~~gg~~Ai~~~l~al--l~~GD~Vl~~~p~y~~~~~~~~~~~~~~~~-------- 116 (382)
T TIGR02080 48 SGNPTRDLLQQALAELE-GGAGAVVTNTGMSAIHLVTTAL--LGPDDLLVAPHDCYGGTYRLLNALAKKGCF-------- 116 (382)
T ss_pred CCCchHHHHHHHHHHHh-CCCcEEEEcCHHHHHHHHHHHH--cCCCCEEEEcCCCcHHHHHHHHHHHhhcCe--------
Confidence 46777788999999888 4678999999999999999842 345677888888887644322221111100
Q ss_pred CCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cc
Q 011856 216 GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RL 294 (476)
Q Consensus 216 ~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~ 294 (476)
.+..++..|++++++.++. ++++|+++.++|++|.+.+ +++|.++|+++|+++|+||+|..+ ..
T Consensus 117 --------~v~~~d~~d~~~l~~ai~~---~tklV~l~~p~NPtG~~~d----l~~I~~la~~~g~~vvvD~a~~~~~~~ 181 (382)
T TIGR02080 117 --------RVLFVDQGDEQALRAALAQ---KPKLVLIETPSNPLLRVVD----IAKICHLAKAVGAVVVVDNTFLSPALQ 181 (382)
T ss_pred --------EEEEECCCCHHHHHHhcCc---CceEEEEECCCCCCCEecC----HHHHHHHHHHcCCEEEEECCCcccccC
Confidence 1222233478999998864 5788888888888899888 899999999999999999999532 21
Q ss_pred cccchhhccCCCCchh--hhhhhcCC--CCcEEEEEe-cHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCH
Q 011856 295 AYGGAQEYFGVTPDLT--TLGKIIGG--GLPVGAYGG-RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGT 369 (476)
Q Consensus 295 g~~~~~~~~g~~pDi~--t~sK~lg~--G~~iG~~~~-~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~ 369 (476)
. .+....|++ +++|.++| +++.|++++ ++++.+.+.. .......+.+|+.+..++..++.+. ..
T Consensus 182 ~------pl~~gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~l~~---~~~~~g~~~sp~~a~l~lr~l~tl~--~R 250 (382)
T TIGR02080 182 N------PLALGADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEELAW---WANNLGVTGGAFDSYLTLRGLRTLV--AR 250 (382)
T ss_pred C------chhhCCCEEEeecceeccCCCCceeEEEEeCCHHHHHHHHH---HHHccCCCCCHHHHHHHHcccchHH--HH
Confidence 1 111224655 68999974 578998866 5777776652 1122244678888777766665442 33
Q ss_pred HHHHHHHHHHHHHHHHHHhh----hcCC-c---------eEeeeeceeEEEEEe
Q 011856 370 YEYLNKITGELTQGIIDAGK----KAGH-A---------ICGGYISGMFGFFFT 409 (476)
Q Consensus 370 ~~~~~~~~~~l~~~L~~~~~----~~~~-~---------~~v~~~g~~~~i~~~ 409 (476)
+++..++...+.+.|++... .||. . ....|.|.|+.|++.
T Consensus 251 ~~~~~~na~~~a~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~ 304 (382)
T TIGR02080 251 MRLQQRNAQAIVEYLQTQPLVKKIYYPGLPDHPGHEIAARQQKGFGAMLSFELK 304 (382)
T ss_pred HHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEec
Confidence 55666777777777664310 0110 0 012467889999985
No 269
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.73 E-value=1.1e-15 Score=151.94 Aligned_cols=237 Identities=14% Similarity=0.122 Sum_probs=157.0
Q ss_pred CCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCC
Q 011856 136 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 215 (476)
Q Consensus 136 ~~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~ 215 (476)
++++...+|.++++++.+ .+.+++++||++|+..++.. ....++.|++.++.|++............
T Consensus 49 ~~~pt~~~L~~~lA~l~g-~~~~i~~~sg~~Ai~~~l~~--l~~~GD~Vl~~~~~y~~~~~~~~~~~~~~---------- 115 (386)
T PRK08045 49 RGNPTRDVVQRALAELEG-GAGAVLTNTGMSAIHLVTTV--FLKPGDLLVAPHDCYGGSYRLFDSLAKRG---------- 115 (386)
T ss_pred CCCccHHHHHHHHHHHhC-CCeEEEECCHHHHHHHHHHH--HcCCCCEEEEcCCCcHHHHHHHHHHHhhC----------
Confidence 466777889999998884 56799999999999999884 23456788888888876443322221110
Q ss_pred CCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cc
Q 011856 216 GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RL 294 (476)
Q Consensus 216 ~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~ 294 (476)
++ .+..++..|++++++.+++ ++++|+++.++|++|.+.+ +++|.++|+++|+++|+||+|... ..
T Consensus 116 gi------~v~~vd~~d~e~l~~~l~~---~tklV~l~sP~NPtG~v~d----i~~I~~ia~~~g~~vivDeay~~~~~~ 182 (386)
T PRK08045 116 CY------RVLFVDQGDEQALRAALAE---KPKLVLVESPSNPLLRVVD----IAKICHLAREAGAVSVVDNTFLSPALQ 182 (386)
T ss_pred Ce------EEEEeCCCCHHHHHHhccc---CCeEEEEECCCCCCCEecC----HHHHHHHHHHcCCEEEEECCCCccccC
Confidence 00 1122233478999988864 5788888888888899988 899999999999999999999533 21
Q ss_pred cccchhhccCCCCchh--hhhhhcCC--CCcEEEEEe-cHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCH
Q 011856 295 AYGGAQEYFGVTPDLT--TLGKIIGG--GLPVGAYGG-RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGT 369 (476)
Q Consensus 295 g~~~~~~~~g~~pDi~--t~sK~lg~--G~~iG~~~~-~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~ 369 (476)
.......|++ +++|.++| ++..|++++ ++++.+.+.. .....+.+.+|+.+..++..|+.+ +..
T Consensus 183 ------~pl~~gaDivv~S~tK~l~G~~d~~~G~vi~~~~~~~~~l~~---~~~~~g~~~~p~~~~l~~rgl~tl--~~R 251 (386)
T PRK08045 183 ------NPLALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAW---WANNIGVTGGAFDSYLLLRGLRTL--VPR 251 (386)
T ss_pred ------CchhhCCCEEEeecceeccCCCCceeEEEEeCcHHHHHHHHH---HHHhcCCCCCHHHHHHHHhhhccH--HHH
Confidence 1122234665 68999984 477888866 5777666642 112223457788887777776543 344
Q ss_pred HHHHHHHHHHHHHHHHHHhh----hcC-Cc---------eEeeeeceeEEEEEe
Q 011856 370 YEYLNKITGELTQGIIDAGK----KAG-HA---------ICGGYISGMFGFFFT 409 (476)
Q Consensus 370 ~~~~~~~~~~l~~~L~~~~~----~~~-~~---------~~v~~~g~~~~i~~~ 409 (476)
+++..++...+.+.|++... .|| +. ....+.|.|+.|++.
T Consensus 252 ~~~~~~na~~la~~L~~~p~v~~V~yp~l~~~p~~~~~~~~~~g~g~~~s~~~~ 305 (386)
T PRK08045 252 MELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELD 305 (386)
T ss_pred HHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEec
Confidence 56666677777776665310 011 00 012467889999985
No 270
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.72 E-value=5.4e-16 Score=154.93 Aligned_cols=234 Identities=15% Similarity=0.102 Sum_probs=155.3
Q ss_pred CCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCC
Q 011856 136 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 215 (476)
Q Consensus 136 ~~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~ 215 (476)
++++...+|.+.++++. +.+.+++++||+.|+..++... ...+++|++....|.+ +.......-
T Consensus 67 ~~~p~~~~le~~lA~l~-g~~~al~~~sG~~Ai~~~l~al--l~~Gd~Vl~~~~~~~~-t~~~~~~~~------------ 130 (403)
T PRK07810 67 YGNPTVSMFEERLRLIE-GAEACFATASGMSAVFTALGAL--LGAGDRLVAARSLFGS-CFVVCNEIL------------ 130 (403)
T ss_pred CCCchHHHHHHHHHHHh-CCCcEEEECChHHHHHHHHHHH--hCCCCEEEEccCCcch-HHHHHHHHH------------
Confidence 45666788999999888 5678999999999999988742 3456677766544433 332221100
Q ss_pred CCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-Cccc
Q 011856 216 GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GFRL 294 (476)
Q Consensus 216 ~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~r~ 294 (476)
...+.++..++.+|++++++.+++ ++++|++|.+.|+.|.+.+ +++|.++|+++|++||+||+|. ++..
T Consensus 131 ---~~~G~~v~~vd~~d~~~l~~ai~~---~tklV~~esp~Nptg~v~d----l~~I~~la~~~g~~vivD~a~a~~~~~ 200 (403)
T PRK07810 131 ---PRWGVETVFVDGEDLSQWEEALSV---PTQAVFFETPSNPMQSLVD----IAAVSELAHAAGAKVVLDNVFATPLLQ 200 (403)
T ss_pred ---HHcCcEEEEECCCCHHHHHHhcCc---CceEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEECCCCccccC
Confidence 001113555566789999999874 5789999988888998888 9999999999999999999994 3211
Q ss_pred cccchhhccCCCCchh--hhhhhcCC-CCcE-EEEEecHHHHH-hhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCH
Q 011856 295 AYGGAQEYFGVTPDLT--TLGKIIGG-GLPV-GAYGGRRDIME-MVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGT 369 (476)
Q Consensus 295 g~~~~~~~~g~~pDi~--t~sK~lg~-G~~i-G~~~~~~~i~~-~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~ 369 (476)
. . . ..| .|++ +++|.+++ |.++ |+++++++.+. .++. .........+|..++.++..|+.+ +..
T Consensus 201 ~-~--~-~~g--aDivv~S~tK~l~g~g~~~gG~v~~~~~~~~~~l~~---~~~~~g~~~s~~~a~l~l~~L~tl--~~R 269 (403)
T PRK07810 201 R-G--L-PLG--ADVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQK---LMRHTGPALSAFNAWVLLKGLETL--ALR 269 (403)
T ss_pred C-h--h-hcC--CcEEEccCCceecCCcCceeEEEEeChHHHHHHHHH---HHHHhCCCCCHHHHHHHHhccCcH--HHH
Confidence 1 1 1 123 4665 67899985 7776 66777877554 2331 111112356788888777776644 455
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCceE------------------eeeeceeEEEEEec
Q 011856 370 YEYLNKITGELTQGIIDAGKKAGHAIC------------------GGYISGMFGFFFTE 410 (476)
Q Consensus 370 ~~~~~~~~~~l~~~L~~~~~~~~~~~~------------------v~~~g~~~~i~~~~ 410 (476)
.++..++...+.+.|++. +.+.. ..+.|.|+.+++..
T Consensus 270 ~~~~~~~a~~~a~~L~~~----p~v~~V~yP~l~~~p~~~~~~~~~~g~g~~~s~~l~~ 324 (403)
T PRK07810 270 VRHSNASALRIAEFLEGH----PAVRWVRYPFLPSHPQYDLAKRQMSGGGTVVTFELDA 324 (403)
T ss_pred HHHHHHHHHHHHHHHhcC----CCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcC
Confidence 666667777777766643 22211 23678899999853
No 271
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.72 E-value=3.1e-15 Score=141.72 Aligned_cols=292 Identities=16% Similarity=0.174 Sum_probs=177.3
Q ss_pred eEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHH
Q 011856 157 MVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSAL 236 (476)
Q Consensus 157 ~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l 236 (476)
+++.+++-+.+++.++++ ....++.|++-+.+|-+. ...+...|..+..+. .+..|+ ++|.|
T Consensus 126 diiit~G~t~~l~~~l~~--~~N~gd~vlie~~ty~~A-L~s~~a~gv~~ipv~-md~~Gi--------------~pE~l 187 (472)
T KOG0634|consen 126 DIIITNGNTDGLFKVLRT--LINRGDHVLIEEYTYPSA-LQSMEALGVKIIPVK-MDQDGI--------------DPESL 187 (472)
T ss_pred eEEEecCCchHHHHHHHH--hhcCCCceEEecccchHH-HHhccccCceEEecc-ccCCCC--------------CHHHH
Confidence 799999999999999995 233445555555566442 222222222111111 112232 79999
Q ss_pred HHHHhcCC------CCeEEEEEcccC-CCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cc---cc------cch
Q 011856 237 ENLFENNK------GEIAAIILEPVV-GNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RL---AY------GGA 299 (476)
Q Consensus 237 e~~l~~~~------~~~a~vi~ep~~-~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~---g~------~~~ 299 (476)
++.+..+. +....+.+-|.. |++|...+ .+-.++|.+|++|||+++|.||+|-=+ .. +. ...
T Consensus 188 ~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls-~errk~iy~LArKyDfLIVeDdpYy~Lq~~~y~~~~~~~~p~~s 266 (472)
T KOG0634|consen 188 EEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLS-LERRKKIYQLARKYDFLIVEDDPYYFLQMNTYNPSLELESPAHS 266 (472)
T ss_pred HHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccC-HHHHHHHHHHHHHcCEEEEecCccceeeccccCCCccccCcccc
Confidence 99998642 235667777765 44676655 444999999999999999999999422 22 10 011
Q ss_pred hhcc--CCCCc---------hh---hhhhhcCCCCcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhc
Q 011856 300 QEYF--GVTPD---------LT---TLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLK 365 (476)
Q Consensus 300 ~~~~--g~~pD---------i~---t~sK~lg~G~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~ 365 (476)
.+.+ .+.|+ ++ +|||.++.|+|+||+.+++-+++.+-. .....|-+.+.+.+....+.|+...
T Consensus 267 ~~~f~k~l~~sflslDtdGrVIr~dSFSKiiaPGlRlG~it~~~~~l~ril~---~ae~~t~~pSg~sq~iv~a~l~~wg 343 (472)
T KOG0634|consen 267 SSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIAPGLRLGWITGNSLFLKRILD---LAEVATSGPSGFSQGIVYAMLKRWG 343 (472)
T ss_pred HHHHHHhhcCCcccccccccEEeccchhhhhcCcceeEEeecCHHHHHHHhh---hcceeecCcccccHHHHHHHHHHHH
Confidence 0011 11121 22 799999999999999999988777652 2234455667777888778887766
Q ss_pred CCCHHHHHHHHHHHHHHH---HHHHhhh-cC---CceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCC
Q 011856 366 EPGTYEYLNKITGELTQG---IIDAGKK-AG---HAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEG 438 (476)
Q Consensus 366 ~~~~~~~~~~~~~~l~~~---L~~~~~~-~~---~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G 438 (476)
++.+++.+.+.......+ +...+.+ .+ +....+..|.|+|+++.-. ++.. ...-.+..+.+...+.++|
T Consensus 344 qeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~P~aGmFiwv~i~~~---~~~~-~~~i~q~~e~i~~~~vk~g 419 (472)
T KOG0634|consen 344 QEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHPPKAGMFIWVEIPYI---NFDT-KKSINQIEEIIFIKAVKNG 419 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEecCCcceEEEEEeccc---cccc-ccchHHHHHHHHHHHHHCC
Confidence 655555544444433332 2222222 22 3344567789999998511 1000 0001122345566788999
Q ss_pred eEeccCCC----------c-ceEEeC-CCcHHHHHHHHHHHHHHHHHh
Q 011856 439 VYFAPSQF----------E-AGFTSL-AHSSDDIQHTITAAEKVKMRF 474 (476)
Q Consensus 439 v~~~~~~~----------~-~~~~~~-~~t~e~i~~~~~~l~~~~~~~ 474 (476)
|.+.++.. . .+|++. ....|++++++++|..++++-
T Consensus 420 V~~v~G~~F~v~p~~s~~kiffRls~a~a~~e~l~~g~~rf~~~ike~ 467 (472)
T KOG0634|consen 420 VKLVCGSWFMVDPESSWSKIFFRLSIAFAEPEKLDEGIERFGSVIKEH 467 (472)
T ss_pred eEEecCceeEEcCccCCCcceEEEEeecCCHHHHHHHHHHHHHHHHHH
Confidence 99887631 1 345553 347889999999999988763
No 272
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.72 E-value=8.4e-16 Score=153.51 Aligned_cols=238 Identities=14% Similarity=0.104 Sum_probs=155.4
Q ss_pred CCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCC
Q 011856 136 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 215 (476)
Q Consensus 136 ~~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~ 215 (476)
++++...+|.++++++. +.+..++++||+.|+..++.. ....+++|++.+..|.+.......... ..
T Consensus 62 ~~~p~~~~Le~~lA~l~-G~~~~~~~~sG~~Ai~~~l~~--~l~~Gd~Vl~~~~~y~~~~~~~~~~~~----------~~ 128 (398)
T PRK07504 62 YSNPTVDMFEKRMCALE-GAEDARATASGMAAVTAAILC--QVKAGDHVVAARALFGSCRYVVETLLP----------RY 128 (398)
T ss_pred CCCchHHHHHHHHHHHh-CCCeeeEecCHHHHHHHHHHH--HhCCCCEEEEcCCchhHHHHHHHHHHh----------hc
Confidence 45667788999999888 556667789999999887763 234567888887777664322211100 00
Q ss_pred CCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccc
Q 011856 216 GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLA 295 (476)
Q Consensus 216 ~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g 295 (476)
+ .++..++..|++++++.++. ++++|++|.+++++|.+.+ +++|.++|+++|+++|+||+|......
T Consensus 129 G------~~v~~vd~~d~e~l~~ai~~---~tklV~lesp~NptG~v~d----l~~I~~la~~~gi~lvvD~a~a~~~~~ 195 (398)
T PRK07504 129 G------IESTLVDGLDLDNWEKAVRP---NTKVFFLESPTNPTLEVID----IAAVAKIANQAGAKLVVDNVFATPLFQ 195 (398)
T ss_pred C------eEEEEECCCCHHHHHHhcCc---CceEEEEECCCCCCcEecC----HHHHHHHHHHcCCEEEEECCccccccC
Confidence 1 12344445589999998863 6789999988888999998 999999999999999999999522111
Q ss_pred ccchhhccCCCCchh--hhhhhcCC-CCcEE-EEEecHHHHHh-hcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHH
Q 011856 296 YGGAQEYFGVTPDLT--TLGKIIGG-GLPVG-AYGGRRDIMEM-VAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTY 370 (476)
Q Consensus 296 ~~~~~~~~g~~pDi~--t~sK~lg~-G~~iG-~~~~~~~i~~~-l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~ 370 (476)
. ......|++ +++|.+++ |+++| +++++++.++. ++. .........+|..++.++..|+.+ +...
T Consensus 196 ~-----~~~~gaDivv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~~---~~~~~g~~~s~~~A~~~l~~L~tl--~~R~ 265 (398)
T PRK07504 196 K-----PLELGAHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQD---YFRHTGPSLSPFNAWTLLKGLETL--PVRV 265 (398)
T ss_pred C-----chhhCCCEEEeeccccccCCccceEEEEEeCcHHHHHHHHH---HHHHhCCCCCHHHHHHHHhccchH--HHHH
Confidence 1 112234665 67899985 88886 45677776542 321 111112356788888877777655 3455
Q ss_pred HHHHHHHHHHHHHHHHHhh----hcC-Cc---------eEeeeeceeEEEEEe
Q 011856 371 EYLNKITGELTQGIIDAGK----KAG-HA---------ICGGYISGMFGFFFT 409 (476)
Q Consensus 371 ~~~~~~~~~l~~~L~~~~~----~~~-~~---------~~v~~~g~~~~i~~~ 409 (476)
++..++...+.+.|++... .|| +. ...++.|.|+.|++.
T Consensus 266 ~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~g~g~~~s~~~~ 318 (398)
T PRK07504 266 RQQTESAAAIADFLAGHPKVARVIYPGRADHPQADIIAKQMTGGSTLVAFELK 318 (398)
T ss_pred HHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHHhCCCCccEEEEEeC
Confidence 6666777777777765311 011 11 113456889999985
No 273
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.72 E-value=6.2e-16 Score=136.67 Aligned_cols=286 Identities=16% Similarity=0.179 Sum_probs=180.7
Q ss_pred CCHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCC
Q 011856 137 PCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 215 (476)
Q Consensus 137 ~~~~~~~la~~l~~~~~-~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~ 215 (476)
+..-..++...+.+.-| ..|.+++..|..|.++..+|.. ..+|+++|+...++|.-+...+ ...+.
T Consensus 67 ~d~rnk~ls~a~~~dkpLt~dnic~GvGsDE~ID~iiR~~-c~PGkeKIl~cPPtysMY~v~A-~iNd~----------- 133 (375)
T KOG0633|consen 67 PDPRNKRLSDALAQDKPLTSDNICVGVGSDELIDLIIRCV-CDPGKEKILDCPPTYSMYVVDA-AINDA----------- 133 (375)
T ss_pred CCcccchhhhhcccCCCCCccceEEecCcHHHHHHHHhhe-ecCCccceeecCCcceeEEEEe-ecCCc-----------
Confidence 33333455555655555 6899999999999999999953 3467899999999886543222 11222
Q ss_pred CCCCCCCCceeeccCC-----CHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc
Q 011856 216 GVPKGATYETLTAPFN-----DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT 290 (476)
Q Consensus 216 ~~~~~~~~~~~~~~~~-----d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~ 290 (476)
+++.+|.+ |.+++.+.++.. ..++++++.+..+++|.+...++ +.+|.+.-+ +.++++||+|.
T Consensus 134 --------eVvkvpl~pdF~lnvdai~evl~~d-s~iK~~F~tSPgNPtg~~ik~~d-i~KiLe~p~--nglVVvDEAYi 201 (375)
T KOG0633|consen 134 --------EVVKVPLNPDFSLNVDAIAEVLELD-SKIKCIFLTSPGNPTGSIIKEDD-ILKILEMPD--NGLVVVDEAYI 201 (375)
T ss_pred --------eEEEecCCCCccccHHHHHHHHhcc-ccceEEEEcCCCCCCcccccHHH-HHHHHhCCC--CcEEEEeeeeE
Confidence 23444332 688888888753 36777777776677788776444 555555444 68999999998
Q ss_pred Cc-cccccchhhccCCCCchh---hhhhhcC-CCCcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHH--
Q 011856 291 GF-RLAYGGAQEYFGVTPDLT---TLGKIIG-GGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKR-- 363 (476)
Q Consensus 291 g~-r~g~~~~~~~~g~~pDi~---t~sK~lg-~G~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~-- 363 (476)
.| ..+. ...+..-.|+++ ||||++| +|+|+|+...+.++++.+...+ ..|+.+.++..+|+++|.-
T Consensus 202 dFsg~~S--~~~lV~kYpNLivlqTlSKsfGLAGiRvG~~~~~~~ia~iln~~K-----aPYNiS~~~s~~AL~Als~~n 274 (375)
T KOG0633|consen 202 DFSGVES--RMKLVKKYPNLIVLQTLSKSFGLAGIRVGYGAFPLSIAEILNRAK-----APYNISVAGSVAALAALSDSN 274 (375)
T ss_pred eeccccc--cchHhHhCCceeehhhhhhhcCcceeEeecccccHHHHHHHHhcc-----CCccccchhHHHHHHhcCccc
Confidence 88 5332 222223357765 7999999 8999999999999988876422 3566667777777777751
Q ss_pred hcC-CCHHHHHHHHHHHHHHHHHHHhhhcCCceEee--eeceeEEEEEecCCCcCchhhcccchHHHHHHH-HHHHHCCe
Q 011856 364 LKE-PGTYEYLNKITGELTQGIIDAGKKAGHAICGG--YISGMFGFFFTEGPVYNFEDAKKSETTKFARFY-RGMLEEGV 439 (476)
Q Consensus 364 ~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~--~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~Gv 439 (476)
++. ++.++-+.+.+.+|.+.|.+ .+...+.. ....|+.+++.+. +...+..++ +.+-+.||
T Consensus 275 ~kkme~~rdaiv~er~RL~keLt~----v~~~~~~~gg~daNFiLi~v~~~-----------~n~~akkly~q~at~~gV 339 (375)
T KOG0633|consen 275 GKKMEDVRDAIVRERERLFKELTE----VPFLNDYPGGSDANFILIEVTGG-----------DNGMAKKLYKQDATKMGV 339 (375)
T ss_pred chHHHHHHHHHHHHHHHHHHHhhc----CccccCCCCcccccEEEEEEcCC-----------CcHHHHHHHHHHHHhcce
Confidence 111 23333333333334344433 33322222 2466777777543 223334444 44457899
Q ss_pred EeccCCC-----cceEEeCCCcHHHHHHHHHHHHHH
Q 011856 440 YFAPSQF-----EAGFTSLAHSSDDIQHTITAAEKV 470 (476)
Q Consensus 440 ~~~~~~~-----~~~~~~~~~t~e~i~~~~~~l~~~ 470 (476)
.++..+. +.+|++ ..|+|+.+.+++.|+++
T Consensus 340 vVRfrgse~~c~G~lRit-vGt~EentvL~k~~K~~ 374 (375)
T KOG0633|consen 340 VVRFRGSEEGCKGYLRIT-VGTPEENTVLMKCLKQF 374 (375)
T ss_pred EEEEcCCccccceeEEEE-cCCcccchHHHHHHHhh
Confidence 9986542 235555 45788888888888865
No 274
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.72 E-value=1.1e-15 Score=152.24 Aligned_cols=240 Identities=14% Similarity=0.082 Sum_probs=156.0
Q ss_pred CCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCC
Q 011856 136 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 215 (476)
Q Consensus 136 ~~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~ 215 (476)
++++...+|.+.++++. +.+.+++++||+.|+..++... ...++.|++..+.|.+. ...+..... ..
T Consensus 56 ~~~p~~~~le~~lA~l~-g~~~av~~~sG~~Ai~~~l~al--~~~Gd~Vi~~~~~y~~t-~~~~~~~~~---------~~ 122 (391)
T TIGR01328 56 LGNPTVSNLEGRIAFLE-GTEAAVATSSGMGAIAATLLTI--LKAGDHLISDECLYGCT-FALLEHALT---------KF 122 (391)
T ss_pred CCCchHHHHHHHHHHHh-CCCcEEEECCHHHHHHHHHHHH--hCCCCEEEEecCcchHH-HHHHHHHHh---------cC
Confidence 35666778888888888 5567899999999999888742 34566777766655443 222211000 01
Q ss_pred CCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccc
Q 011856 216 GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLA 295 (476)
Q Consensus 216 ~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g 295 (476)
| ..+..++.+|++++++.++. ++++|++|.++++.|.+.+ +++|.++|+++|+++|+||+|.....+
T Consensus 123 G------~~~~~vd~~d~e~l~~~i~~---~tklV~le~p~Np~G~v~d----l~~I~~la~~~gi~livD~a~a~~~~~ 189 (391)
T TIGR01328 123 G------IQVDFINMAIPEEVKAHIKD---NTKIVYFETPANPTMKLID----MERVCRDAHSQGVKVIVDNTFATPMLT 189 (391)
T ss_pred C------eEEEEECCCCHHHHHHhhcc---CCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEEEECCCchhccC
Confidence 1 23455566689999988863 6788999988888898888 999999999999999999999521111
Q ss_pred ccchhhccCCCCchh--hhhhhcCC-CCc-EEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHHH
Q 011856 296 YGGAQEYFGVTPDLT--TLGKIIGG-GLP-VGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYE 371 (476)
Q Consensus 296 ~~~~~~~~g~~pDi~--t~sK~lg~-G~~-iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~ 371 (476)
. ..+...|++ +++|.+++ |.+ .|++++++++++.++........ ....+|..++.++..|+.+ +..++
T Consensus 190 ~-----~~~~g~Divv~S~sK~lgg~g~~~gG~v~~~~~li~~l~~~~~~~~~-g~~l~~~~a~l~l~~L~tl--~~r~~ 261 (391)
T TIGR01328 190 N-----PVALGVDVVVHSATKYIGGHGDVVAGLICGKAELLQQIRMVGIKDMT-GSVISPFDAWLILRGLKTL--NIRMK 261 (391)
T ss_pred C-----chhcCCCEEEccccccccCCCCceEEEEEcCHHHHHHHHHHHHHhCC-CCCCCcHHHHHHHhCcCcH--HHHHH
Confidence 1 122335655 68899985 666 56678889988877631111111 2345676666666555433 34567
Q ss_pred HHHHHHHHHHHHHHHHhh----hcC-Cc---------eEeeeeceeEEEEEe
Q 011856 372 YLNKITGELTQGIIDAGK----KAG-HA---------ICGGYISGMFGFFFT 409 (476)
Q Consensus 372 ~~~~~~~~l~~~L~~~~~----~~~-~~---------~~v~~~g~~~~i~~~ 409 (476)
+..++..++.+.|++... .+| +. ...++.|.|+.|++.
T Consensus 262 ~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~~~g~~~s~~~~ 313 (391)
T TIGR01328 262 RHSENAMKVAEYLKSHPAVEKVYYPGFEDHPGHDIAAKQMRMGGGMITFELK 313 (391)
T ss_pred HHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEeC
Confidence 777788888888776321 011 11 013466889999985
No 275
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.71 E-value=4.8e-15 Score=133.72 Aligned_cols=307 Identities=15% Similarity=0.154 Sum_probs=184.8
Q ss_pred CHHHHHHHHHHHhhCC---CCCeEEEeCCHHHHHHHHHHHHHhc--cCCc-eEEEE-eCCCCCCchhHHhhcCCCCccCC
Q 011856 138 CLLENVLAEMVISAVP---SIEMVRFVNSGTEACMGVLRLARAF--TGRE-RIIKF-EGCYHGHADPFLVKAGSGVATLG 210 (476)
Q Consensus 138 ~~~~~~la~~l~~~~~---~~e~v~~~~sGseA~~~al~~ar~~--~~~~-~ii~~-~~~yhg~~~~~~~~~g~~~~~~~ 210 (476)
..+...|++.+.+.++ ..+++.+||+...+...+..+.-.. .+.. +|+.. .+-|-|+.+..+.....-..+
T Consensus 77 ~~li~ala~~l~~~ygwnit~~NIalTnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~~d~fVs~k-- 154 (417)
T COG3977 77 AVLIDALAKMLRREYGWNITAQNIALTNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGLEEDLFVSAK-- 154 (417)
T ss_pred hHHHHHHHHHHHHHhCCCCccceeeecCCccchHHHHHHHhcCccCCCcceeEeeccChhhccccccccCccceeecc--
Confidence 4677888888888886 4679999999999988888753222 2322 33332 566877665544221110000
Q ss_pred CCCCCCCCCCCCCceeeccC-CCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccc
Q 011856 211 LPDSPGVPKGATYETLTAPF-NDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM 289 (476)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~-~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~ 289 (476)
|..+..+ --.++| -|.++|+-. +.+.+|++.-..+++|.+...+| +.+|.+|+++||+.||+|.+|
T Consensus 155 -P~iel~~------~g~FKY~vDF~~l~i~-----e~~g~ic~SRPtNPTGNVlTdeE-~~kldalA~~~giPliIDnAY 221 (417)
T COG3977 155 -PNIELLP------AGQFKYHVDFEHLHIG-----ESTGAICVSRPTNPTGNVLTDEE-LAKLDALARQHGIPLIIDNAY 221 (417)
T ss_pred -CCccccc------ccceeeccCHHHcccc-----cccceEEecCCCCCCCCcccHHH-HHHHHHHhhhcCCcEEEeccc
Confidence 1111111 111222 267766422 47888888877777787776555 999999999999999999999
Q ss_pred cCc-cccccchhhccCCCCchh---hhhhhcCCCCcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHH---
Q 011856 290 TGF-RLAYGGAQEYFGVTPDLT---TLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLK--- 362 (476)
Q Consensus 290 ~g~-r~g~~~~~~~~g~~pDi~---t~sK~lg~G~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~--- 362 (476)
. . ..+--|.-...-..++++ ++||.=-.|.|+|.+++++++++.+.+..... +......+.+.+...++
T Consensus 222 g-~PFP~iifsd~~~~w~~NiilC~SLSK~GLPG~R~GIiIane~viqaitnmn~ii---sLap~~~G~Aia~~mie~gd 297 (417)
T COG3977 222 G-VPFPGIIFSDATPLWNENIILCMSLSKLGLPGSRCGIIIANEKVIQAITNMNGII---SLAPGRMGPAIAAEMIESGD 297 (417)
T ss_pred C-CCCCceecccccccCCCCEEEEeehhhcCCCCcceeEEEccHHHHHHHHhcccee---eecCCCccHHHHHHHhhcch
Confidence 3 3 333222111111234554 57784337899999999999999987432111 11112222233332332
Q ss_pred --HhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeE
Q 011856 363 --RLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVY 440 (476)
Q Consensus 363 --~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~ 440 (476)
.+.++-.+--++++.+.....|++...+.++..+-+....|+|+.|.+-+++. .++++.|.++||+
T Consensus 298 l~rlseqVIrPFY~~~~q~~~~~l~~~lp~~~~~iHkpEGAIFlWLWf~dLPItt------------~~LYq~LKa~Gvl 365 (417)
T COG3977 298 LLRLSEQVIRPFYRNRVQTTIAILRRYLPEYRCLIHKPEGAIFLWLWFKDLPITT------------EELYQRLKARGVL 365 (417)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHHhcCccceeeecCCcceeehhhhccCCCCH------------HHHHHHHHhCeEE
Confidence 11111122222333333344444444444544443444456677776655443 6899999999999
Q ss_pred eccCCC-------------cceEEeCCCcHHHHHHHHHHHHHHHHHhh
Q 011856 441 FAPSQF-------------EAGFTSLAHSSDDIQHTITAAEKVKMRFL 475 (476)
Q Consensus 441 ~~~~~~-------------~~~~~~~~~t~e~i~~~~~~l~~~~~~~~ 475 (476)
+.|+.+ .++|+++.-+++.|+..+.+|.+.+++..
T Consensus 366 ~VPG~~FFpGl~~ewpH~hqC~Rmn~~~~~~~ie~Gva~lae~ve~~y 413 (417)
T COG3977 366 MVPGHYFFPGLDKEWPHTHQCMRMNYVPEPEKIEKGVAILAEEVERAY 413 (417)
T ss_pred EecccccCCCCCCCCCCccceEEEecCCCHHHHHHHHHHHHHHHHHHH
Confidence 999842 13588999999999999999999887653
No 276
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.71 E-value=1.3e-15 Score=150.75 Aligned_cols=232 Identities=18% Similarity=0.139 Sum_probs=153.0
Q ss_pred CCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCC
Q 011856 136 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 215 (476)
Q Consensus 136 ~~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~ 215 (476)
++++...+|.+.++++. +.+..++++||++|+..++. .+..+++||+.++.|++..........
T Consensus 49 ~~~pt~~~le~~la~l~-g~~~~~~~~sG~~ai~~~~~---ll~~Gd~Vl~~~~~y~~t~~~~~~~~~------------ 112 (366)
T PRK08247 49 TGNPTRGVLEQAIADLE-GGDQGFACSSGMAAIQLVMS---LFRSGDELIVSSDLYGGTYRLFEEHWK------------ 112 (366)
T ss_pred CCCchHHHHHHHHHHHh-CCCcEEEEcCHHHHHHHHHH---HhCCCCEEEEecCCcCcHHHHHHHHhh------------
Confidence 46667788999999888 44567889999999988764 345668899999999874332211100
Q ss_pred CCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccc-cCccc
Q 011856 216 GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM-TGFRL 294 (476)
Q Consensus 216 ~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~-~g~r~ 294 (476)
..+.++..++..|++++++.+++ ++++|++|.++|+.|.+.+ +++|.++|++||+++|+||+| +++..
T Consensus 113 ----~~G~~v~~vd~~d~~~l~~~i~~---~tklv~le~P~NP~~~~~d----l~~I~~la~~~g~~lIvD~t~~~~~~~ 181 (366)
T PRK08247 113 ----KWNVRFVYVNTASLKAIEQAITP---NTKAIFIETPTNPLMQETD----IAAIAKIAKKHGLLLIVDNTFYTPVLQ 181 (366)
T ss_pred ----ccCceEEEECCCCHHHHHHhccc---CceEEEEECCCCCCCcHHH----HHHHHHHHHHcCCEEEEECCCcccccc
Confidence 01113455566689999998864 5778888776666665555 999999999999999999999 43311
Q ss_pred cccchhhccCCCCchh--hhhhhcCC--CCcEEEEEec-HHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCH
Q 011856 295 AYGGAQEYFGVTPDLT--TLGKIIGG--GLPVGAYGGR-RDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGT 369 (476)
Q Consensus 295 g~~~~~~~~g~~pDi~--t~sK~lg~--G~~iG~~~~~-~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~ 369 (476)
. . .....|++ ++||.++| ++..|+++++ +++++.+.. .........+|..+..++..|+.+ +..
T Consensus 182 ~-p-----~~~g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~~~~~~---~~~~~g~~~s~~~a~l~~~~l~tl--~~r 250 (366)
T PRK08247 182 R-P-----LEEGADIVIHSATKYLGGHNDVLAGLVVAKGQELCERLAY---YQNAAGAVLSPFDSWLLIRGMKTL--ALR 250 (366)
T ss_pred C-c-----hhcCCcEEEeecceeccCCCceeeeEEecChHHHHHHHHH---HHHhcCCCCChHHHHHHHhccCcH--HHH
Confidence 1 1 11123554 79999985 4788999886 667766642 112223455777776666665433 234
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCceE--eeeeceeEEEEEe
Q 011856 370 YEYLNKITGELTQGIIDAGKKAGHAIC--GGYISGMFGFFFT 409 (476)
Q Consensus 370 ~~~~~~~~~~l~~~L~~~~~~~~~~~~--v~~~g~~~~i~~~ 409 (476)
+++.+++.+.+.+.|++ ++.+.. .++.|.|+.+++.
T Consensus 251 ~~~~~~~a~~l~~~L~~----~p~v~~v~~P~~gg~~sf~~~ 288 (366)
T PRK08247 251 MRQHEENAKAIAAFLNE----QPGVTDVLYPGRGGMLSFRLQ 288 (366)
T ss_pred HHHHHHHHHHHHHHHHh----CCCeeEEecCCcCcEEEEEEC
Confidence 45556666666666665 333322 3457888888874
No 277
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.71 E-value=2.4e-15 Score=149.89 Aligned_cols=237 Identities=16% Similarity=0.135 Sum_probs=149.6
Q ss_pred CCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCC
Q 011856 137 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPG 216 (476)
Q Consensus 137 ~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~ 216 (476)
.++...+|.+.+++++ +.+.+++++||++|+..++... ...++.||+....|.+..........
T Consensus 59 ~~p~~~~le~~la~l~-g~~~~v~~ssG~~Ai~~al~al--~~~Gd~Vi~~~~~y~~t~~~~~~~~~------------- 122 (390)
T PRK08133 59 TNPTVTMFQERLAALE-GAEACVATASGMAAILAVVMAL--LQAGDHVVSSRSLFGSTVSLFEKIFA------------- 122 (390)
T ss_pred CChHHHHHHHHHHHHh-CCCcEEEECCHHHHHHHHHHHH--hCCCCEEEEccCcchhHHHHHHHHHH-------------
Confidence 4566778888888888 5678999999999999998742 34566777766555443221111000
Q ss_pred CCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCccccc
Q 011856 217 VPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY 296 (476)
Q Consensus 217 ~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~ 296 (476)
..+.++..++.+|++++++.++. ++++|++|.++|+.|.+.+ +++|.++|++||+++|+|+++.......
T Consensus 123 ---~~G~~v~~vd~~d~~~l~~~i~~---~tklV~ie~p~NptG~v~d----l~~I~~la~~~gi~livD~t~~~~~~~~ 192 (390)
T PRK08133 123 ---RFGIETTFVDLTDLDAWRAAVRP---NTKLFFLETPSNPLTELAD----IAALAEIAHAAGALLVVDNCFCTPALQQ 192 (390)
T ss_pred ---HcCcEEEEECCCCHHHHHHhcCc---CCeEEEEECCCCCCCCcCC----HHHHHHHHHHcCCEEEEECCCcccccCC
Confidence 00113555666789999998863 6788999888888899988 9999999999999999999984221101
Q ss_pred cchhhccCCCCchh--hhhhhcCC-CCcE-EEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHHHH
Q 011856 297 GGAQEYFGVTPDLT--TLGKIIGG-GLPV-GAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEY 372 (476)
Q Consensus 297 ~~~~~~~g~~pDi~--t~sK~lg~-G~~i-G~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~ 372 (476)
. . ..| .|++ +++|.+++ |.++ |++++++++++.+.. .........++..+..++..++.+ ....++
T Consensus 193 p--l-~~g--~Divv~S~sK~~~g~g~~~GG~vv~~~~~~~~~~~---~~~~~g~~~~~~~a~~~l~gl~tl--~~R~~~ 262 (390)
T PRK08133 193 P--L-KLG--ADVVIHSATKYLDGQGRVLGGAVVGSKELMEEVFG---FLRTAGPTLSPFNAWVFLKGLETL--SLRMEA 262 (390)
T ss_pred c--h-hhC--CcEEEeecceeecCCcceEeEEEEcCHHHHHHHHH---HHHHhCCCCCHHHHHHHHcccchH--HHHHHH
Confidence 1 1 122 4655 68899985 7777 556778877665542 111112244566655554444322 334455
Q ss_pred HHHHHHHHHHHHHHHhh----hcC-Cce---------EeeeeceeEEEEEe
Q 011856 373 LNKITGELTQGIIDAGK----KAG-HAI---------CGGYISGMFGFFFT 409 (476)
Q Consensus 373 ~~~~~~~l~~~L~~~~~----~~~-~~~---------~v~~~g~~~~i~~~ 409 (476)
..++...+.+.|++... .+| +.. ...+.|.|+.|++.
T Consensus 263 ~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~g~~~s~~l~ 313 (390)
T PRK08133 263 HSANALALAEWLEAHPGVERVFYPGLPSHPQHELAKRQQKGGGAIVSFEVK 313 (390)
T ss_pred HHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEEc
Confidence 55666666666665310 011 000 13467889999985
No 278
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.71 E-value=2.1e-15 Score=149.17 Aligned_cols=246 Identities=16% Similarity=0.076 Sum_probs=151.6
Q ss_pred CCCCcHHHHHHHHHHHHhc--CCCCC-C------CHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHHHhc--cC
Q 011856 113 IGHADDQVLAALGETMKKG--TSFGA-P------CLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAF--TG 180 (476)
Q Consensus 113 lG~~~p~v~~a~~~~l~~~--~~~~~-~------~~~~~~la~~l~~~~~-~~e~v~~~~sGseA~~~al~~ar~~--~~ 180 (476)
.+..++.+.+++.+.+... ..... + .+...++.+++++++. +.++++|++|++++++.+++..... ..
T Consensus 7 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~~~~ 86 (353)
T TIGR03235 7 TTPIDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEALGADTEEVIFTSGATESNNLAILGLARAGEQK 86 (353)
T ss_pred CCCCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhcccC
Confidence 3456899999999888542 11111 1 1335678888888886 5678999999999999998854322 12
Q ss_pred CceEEEEeCCCCCCchhHHh---hcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCC
Q 011856 181 RERIIKFEGCYHGHADPFLV---KAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVG 257 (476)
Q Consensus 181 ~~~ii~~~~~yhg~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~ 257 (476)
+++.|+.....|........ ..|..+...+.... + ..|+++|++.+++ ++++|+++.+++
T Consensus 87 g~~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~-~-------------~~d~~~l~~~l~~---~~~lv~~~~~~n 149 (353)
T TIGR03235 87 GKKHIITSAIEHPAVLEPIRALERNGFTVTYLPVDES-G-------------RIDVDELADAIRP---DTLLVSIMHVNN 149 (353)
T ss_pred CCCeeeEcccccHHHHHHHHHHHhcCCEEEEEccCCC-C-------------cCCHHHHHHhCCC---CCEEEEEEcccC
Confidence 22444444444544332221 12322222111100 0 1278999998863 578888888888
Q ss_pred CCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-CccccccchhhccCCCCchhhhh--hhcCCCCcEEEEEecHHHHHh
Q 011856 258 NSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GFRLAYGGAQEYFGVTPDLTTLG--KIIGGGLPVGAYGGRRDIMEM 334 (476)
Q Consensus 258 ~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~r~g~~~~~~~~g~~pDi~t~s--K~lg~G~~iG~~~~~~~i~~~ 334 (476)
++|.+.| +++|.++|++||+++|+|++|. |.. ....+ ....|++++| |.++. ..+|+++.+++..+.
T Consensus 150 ~tG~~~~----~~~I~~l~~~~~~~~ivD~a~~~g~~---~~~~~--~~~~D~~~~s~~K~~gp-~g~g~l~~~~~~~~~ 219 (353)
T TIGR03235 150 ETGSIQP----IREIAEVLEAHEAFFHVDAAQVVGKI---TVDLS--ADRIDLISCSGHKIYGP-KGIGALVIRKRGKPK 219 (353)
T ss_pred CceeccC----HHHHHHHHHHcCCEEEEEchhhcCCc---ccccc--ccCCCEEEeehhhcCCC-CceEEEEEccCcccc
Confidence 9999998 9999999999999999999995 211 11111 1236777555 97641 238999888875332
Q ss_pred hcCCCCccc-------cCCCCCcHHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHH
Q 011856 335 VAPAGPMYQ-------AGTLSGNPLAMTAGIHTLKRLKE--PGTYEYLNKITGELTQGIID 386 (476)
Q Consensus 335 l~~~~~~~~-------~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~ 386 (476)
.. ..+... ......|+....+..++++.+.+ ++..++++++.++++++|++
T Consensus 220 ~~-~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~ 279 (353)
T TIGR03235 220 AP-LKPIMFGGGQERGLRPGTLPVHLIVGMGEAAEIARRNAQAWEVKLRAMRNQLRDALQT 279 (353)
T ss_pred cc-cCceeeCCCCcCccccCCCChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc
Confidence 11 001111 11223456666677777877653 45667777777777777765
No 279
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.70 E-value=2.1e-14 Score=145.77 Aligned_cols=315 Identities=15% Similarity=0.087 Sum_probs=179.7
Q ss_pred CcHHHHHHHHHHHHh--cCC-----CCCCCHHHHHHH----HHHHhhCCCCCeEE-E---eCCHHHHHHHHHHHHHhccC
Q 011856 116 ADDQVLAALGETMKK--GTS-----FGAPCLLENVLA----EMVISAVPSIEMVR-F---VNSGTEACMGVLRLARAFTG 180 (476)
Q Consensus 116 ~~p~v~~a~~~~l~~--~~~-----~~~~~~~~~~la----~~l~~~~~~~e~v~-~---~~sGseA~~~al~~ar~~~~ 180 (476)
..|.+.+++...+.+ +.. +..-++...++. ++..+.+...+..+ + .+||+.||.+++. ++.+
T Consensus 46 ~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~~~~~~~f~~~~~~~~~nv~~~SG~~AN~av~~---aL~~ 122 (475)
T PLN03226 46 TSRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFAVYT---ALLQ 122 (475)
T ss_pred CCHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHHHHHHHHhCCCcceeEEecCcCchHHHHHHHHH---HhCC
Confidence 468999999988843 111 111122333333 23445564333333 2 3899999999998 4444
Q ss_pred -CceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCC------CHHHHHHHHhcCCCCeEEEEE-
Q 011856 181 -RERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFN------DVSALENLFENNKGEIAAIIL- 252 (476)
Q Consensus 181 -~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~------d~~~le~~l~~~~~~~a~vi~- 252 (476)
++.|+..+-...|+........+..+. ..+ ...+.+.+++| |+++|++++++. +.+.|++
T Consensus 123 pgD~Il~~d~~~gGhl~H~~~~~g~~~s------~~~----~~~~~~~y~~~~~~g~iD~d~Le~~l~~~--~pklIv~~ 190 (475)
T PLN03226 123 PHDRIMGLDLPHGGHLSHGYQTDGKKIS------ATS----IYFESMPYRLDESTGLIDYDKLEKKAMLF--RPKLIIAG 190 (475)
T ss_pred CCCEEEECCCCcCcchhhhhhhcccccc------cce----EEEEeeeeeecCCCCCcCHHHHHHHHhhc--CCeEEEEe
Confidence 455655443222221111111111000 000 00011233445 899999999754 3445555
Q ss_pred cccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccc-cCc-cccccchhhccCCCCchh--hhhhhcCCCCcEEEEEec
Q 011856 253 EPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM-TGF-RLAYGGAQEYFGVTPDLT--TLGKIIGGGLPVGAYGGR 328 (476)
Q Consensus 253 ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~-~g~-r~g~~~~~~~~g~~pDi~--t~sK~lg~G~~iG~~~~~ 328 (476)
+++++ ...+ +++|+++|++||++|++|++| .|+ ..+... ..++ ..|++ |++|+|.| -+.|+++++
T Consensus 191 ~S~~s---~~~D----~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~--~p~~-~~Div~~t~hK~L~G-P~Gg~I~~~ 259 (475)
T PLN03226 191 ASAYP---RDWD----YARMRKIADKVGALLMCDMAHISGLVAAQEAA--SPFE-YCDVVTTTTHKSLRG-PRGGMIFFR 259 (475)
T ss_pred cCcCC---CccC----HHHHHHHHHHcCCEEEEEchhhhCcccCCCCC--CCCC-CCeEEEecCcccccC-CCceEEEEc
Confidence 55543 4445 889999999999999999999 566 332211 1122 35766 68899964 234666777
Q ss_pred HHHH-----------Hh--hcCCCCccccCCCCCcHHHHHHHHHHHHHhcCC---CHHHHHHHHHHHHHHHHHHHhhhcC
Q 011856 329 RDIM-----------EM--VAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEP---GTYEYLNKITGELTQGIIDAGKKAG 392 (476)
Q Consensus 329 ~~i~-----------~~--l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~---~~~~~~~~~~~~l~~~L~~~~~~~~ 392 (476)
+++. +. ..+......+. .+.++...++..++|+.+.+. ++.+++.++.++|++.|.+.+.+
T Consensus 260 ~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~-g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~~na~~L~~~L~~~G~~-- 336 (475)
T PLN03226 260 KGPKPPKGQGEGAVYDYEDKINFAVFPGLQ-GGPHNHTIAALAVALKQAMTPEFKAYQKQVKANAAALANRLMSKGYK-- 336 (475)
T ss_pred hhhcccccCCCccHHHHHHHhccccCCccC-CCchHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHhCCCE--
Confidence 7544 22 11111111222 235566777777889988653 46888889999999988874321
Q ss_pred CceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCC---------CcceEE------eCCCcH
Q 011856 393 HAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ---------FEAGFT------SLAHSS 457 (476)
Q Consensus 393 ~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~---------~~~~~~------~~~~t~ 457 (476)
+... .....++.+.+.... ....++.+.|.+.||++..+. .+.+|+ +..+++
T Consensus 337 l~~~-~t~~hi~lv~~~~~g------------i~~~~~~~~L~~~~I~~nk~~~p~~~~~~~~~giRiGt~~lt~~g~~~ 403 (475)
T PLN03226 337 LVTG-GTDNHLVLWDLRPLG------------LTGSRVEKVLDLAHITLNKNAVPGDSSALVPGGVRIGTPAMTSRGLVE 403 (475)
T ss_pred EEcC-CCCCCEEEEEccCCC------------CCHHHHHHHHHHCCCEECCCCCCCCcccCCCCCcccCcHHHHHCCCCH
Confidence 1110 011345555553211 112456677778899887542 234554 467899
Q ss_pred HHHHHHHHHHHHHHH
Q 011856 458 DDIQHTITAAEKVKM 472 (476)
Q Consensus 458 e~i~~~~~~l~~~~~ 472 (476)
+|++++.+.|.++++
T Consensus 404 ~d~~~ia~~i~~~~~ 418 (475)
T PLN03226 404 KDFEKVAEFLHRAVT 418 (475)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999999886
No 280
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.70 E-value=7.2e-15 Score=146.50 Aligned_cols=288 Identities=14% Similarity=0.034 Sum_probs=172.6
Q ss_pred CCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhH---HhhcCCCCccCCCC
Q 011856 136 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPF---LVKAGSGVATLGLP 212 (476)
Q Consensus 136 ~~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~---~~~~g~~~~~~~~~ 212 (476)
++++...+|.+.++++. +.+.+++++||++|+..++... ...++.||+.++.|.+..... +...|.
T Consensus 62 ~~~pt~~~Le~~lA~l~-g~~~~l~~~sgt~Ai~~~l~al--~~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi-------- 130 (394)
T PRK07050 62 HATPTSLALAQRLAEIE-GGRHALLQPSGLAAISLVYFGL--VKAGDDVLIPDNAYGPNRDHGEWLARDFGI-------- 130 (394)
T ss_pred CCCHHHHHHHHHHHHHh-CCCeEEEeccHHHHHHHHHHHH--hCCCCEEEEecCCcccHHHHHHHHHHhcCe--------
Confidence 46667788999998887 5789999999999999999843 346678888888887643211 111121
Q ss_pred CCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-C
Q 011856 213 DSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-G 291 (476)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~-g 291 (476)
++..++..+.+++++.++. ++++|++|.+.|+.|.+.+ +++|.++|+++|++||+|++|. +
T Consensus 131 -----------~v~~vd~~~~~~l~~~i~~---~tklV~le~p~Np~~~~~d----i~~I~~ia~~~gi~livD~a~a~~ 192 (394)
T PRK07050 131 -----------TVRFYDPLIGAGIADLIQP---NTRLIWLEAPGSVTMEVPD----VPAITAAARARGVVTAIDNTYSAG 192 (394)
T ss_pred -----------EEEEECCCCHHHHHHhcCC---CCeEEEEECCCCCCccHhh----HHHHHHHHHHcCCEEEEECCcccc
Confidence 2333443456788888863 5788888877777666555 9999999999999999999994 3
Q ss_pred ccccccchhhccCCCCchh--hhhhhcCCC--CcEEEEEe-cHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC
Q 011856 292 FRLAYGGAQEYFGVTPDLT--TLGKIIGGG--LPVGAYGG-RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE 366 (476)
Q Consensus 292 ~r~g~~~~~~~~g~~pDi~--t~sK~lg~G--~~iG~~~~-~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~ 366 (476)
.. ......| .|++ +++|.+++| .+.|++++ ++++++.++.. ......+.+|..+..++..|+.+
T Consensus 193 ~~----~~~l~~G--aDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~~---~~~~G~~~~~~~a~l~lr~l~tl-- 261 (394)
T PRK07050 193 LA----FKPFEHG--VDISVQALTKYQSGGSDVLMGATITADAELHAKLKLA---RMRLGIGVSADDCSLVLRGLPSL-- 261 (394)
T ss_pred cc----cCHHHcC--CeEEEEECCceecCCCCeeEEEEEECCHHHHHHHHHH---HHhcCCCCCHHHHHHHHcCCCcH--
Confidence 21 1111123 3655 689999854 57888865 67777766521 11112244555544333322211
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhh----hcC-Cc---------eEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHH
Q 011856 367 PGTYEYLNKITGELTQGIIDAGK----KAG-HA---------ICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYR 432 (476)
Q Consensus 367 ~~~~~~~~~~~~~l~~~L~~~~~----~~~-~~---------~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (476)
...+++..++...+.+.|++... .+| +. ....+.|.++.+.+..+. ..+...+|.+
T Consensus 262 ~~Rl~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~----------~~~~~~~~~~ 331 (394)
T PRK07050 262 QVRLAAHDRSALEVAEWLKARPEIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDERY----------SPAQVDAFVE 331 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCCC----------CHHHHHHHHH
Confidence 22344555555556666554310 001 00 012345777777774210 1233456777
Q ss_pred HHHHCCeEeccCCCc---------------------ceEEeCCCcHHHHHHHHHHHHHHHHHhh
Q 011856 433 GMLEEGVYFAPSQFE---------------------AGFTSLAHSSDDIQHTITAAEKVKMRFL 475 (476)
Q Consensus 433 ~l~~~Gv~~~~~~~~---------------------~~~~~~~~t~e~i~~~~~~l~~~~~~~~ 475 (476)
.|...++-+.-++.. .+|++... |+.+.+++-|+++++..+
T Consensus 332 ~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~iR~svGl--E~~~dl~~dl~~al~~~~ 393 (394)
T PRK07050 332 ALELFAIGWSWGGACSLAMPYDVASMRTAKWPHRGTLVRLYIGL--EDEADLIADLEQALEAAL 393 (394)
T ss_pred cCCCCeeccccCCccceEeeCcccccchhhcCCCCCEEEEEeCc--CCHHHHHHHHHHHHHHhh
Confidence 666555433322211 23454443 567777888888877654
No 281
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.69 E-value=4.2e-15 Score=147.06 Aligned_cols=286 Identities=11% Similarity=0.070 Sum_probs=176.3
Q ss_pred CHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCC
Q 011856 138 CLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGV 217 (476)
Q Consensus 138 ~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~ 217 (476)
++...+|+++++++. +.+.+++++||++|+..++... ...+++||+.++.|++.....-.... ..++
T Consensus 49 nPt~~~lE~~lA~l~-g~~~~~~~~sG~~Ai~~al~al--l~~GD~Vl~~~~~y~~t~~~~~~~~~----------~~gi 115 (377)
T TIGR01324 49 TLTHFALQDAMCELE-GGAGCYLYPSGLAAVTNSILAF--VKAGDHVLMVDSAYEPTRYFCDIVLK----------RMGV 115 (377)
T ss_pred CccHHHHHHHHHHHh-CCCcEEEECcHHHHHHHHHHHh--cCCCCEEEEcCCCcHHHHHHHHHHHH----------hcCc
Confidence 445567777787777 5678999999999999999842 44567888888888874322110000 0111
Q ss_pred CCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-Cccccc
Q 011856 218 PKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GFRLAY 296 (476)
Q Consensus 218 ~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~r~g~ 296 (476)
++..++.++.+++++.++. ++++|++|.+.++.|.+.+ +++|.++|++||+++|+|++|. |+.
T Consensus 116 ------~v~~~d~~~~e~l~~~i~~---~tklV~lesp~Np~g~~~d----l~~I~~la~~~g~~livD~t~a~g~~--- 179 (377)
T TIGR01324 116 ------DITYYDPLIGEDIATLIQP---NTKVLFLEAPSSITFEIQD----IPAIAKAARNPGIVIMIDNTWAAGLL--- 179 (377)
T ss_pred ------EEEEECCCCHHHHHHhcCC---CceEEEEECCCCCCCcHHH----HHHHHHHHHHcCCEEEEECCCccccc---
Confidence 2333334445788888763 6889999988888888887 9999999999999999999994 331
Q ss_pred cchhhccCCCCchh--hhhhhcCC--CCcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHHHH
Q 011856 297 GGAQEYFGVTPDLT--TLGKIIGG--GLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEY 372 (476)
Q Consensus 297 ~~~~~~~g~~pDi~--t~sK~lg~--G~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~ 372 (476)
+ .......|++ +++|.++| +.-.|+++++++.++.+.. .....+ ...+|..+...+..++.+ .-..++
T Consensus 180 -~--~pl~~gaDivv~S~tK~l~G~~d~~gG~v~~~~~~~~~l~~--~~~~~G-~~l~p~~a~~~~rgl~tl--~~R~~~ 251 (377)
T TIGR01324 180 -F--KPLEHGVDISIQAGTKYLVGHSDIMIGTVVANARTWDQLRE--HSYLMG-QMVDADDAYTTLRGLRTL--GVRLKQ 251 (377)
T ss_pred -c--CccccCceEEEecCceeccCCCCceEEEEEeCHHHHHHHHH--HHHHhC-CCCCHHHHHHHHhhhhhH--HHHHHH
Confidence 1 1122345766 57899985 3668888888887776652 111222 245666666655555533 334566
Q ss_pred HHHHHHHHHHHHHHHhh----hcCC-c---------eEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCC
Q 011856 373 LNKITGELTQGIIDAGK----KAGH-A---------ICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEG 438 (476)
Q Consensus 373 ~~~~~~~l~~~L~~~~~----~~~~-~---------~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G 438 (476)
..++...+.+.|++... .+|. . ....+.|.|+.|++.+. ..+...+|.+.|.-.+
T Consensus 252 ~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~~-----------~~~~~~~~~~~l~~~~ 320 (377)
T TIGR01324 252 HQESSLAIAKWLSEQPEVARVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQRL-----------TQKQVHAFLDHLQLFG 320 (377)
T ss_pred HHHHHHHHHHHHHhCCCcCEEECCCCCCCccHHHHHHhccCCCceEEEEECCC-----------CHHHHHHHHHhCCcce
Confidence 66666667666665311 0110 0 01236688999998531 1223345666555433
Q ss_pred eEeccCCC-----------------------cceEEeCCCcHHHHHHHHHHHHHHHHH
Q 011856 439 VYFAPSQF-----------------------EAGFTSLAHSSDDIQHTITAAEKVKMR 473 (476)
Q Consensus 439 v~~~~~~~-----------------------~~~~~~~~~t~e~i~~~~~~l~~~~~~ 473 (476)
+-+.-++. ..+|++... ||.+.+++-|+++++.
T Consensus 321 ~~~slG~~~sl~~~~~~~~~~~~~~~~~~~~~liR~svGl--E~~~dl~~dl~~al~~ 376 (377)
T TIGR01324 321 LGYSWGGYESLALCNQPELGHRPNIKRNLEGPLIRVHIGL--ENVDDLKADLKAGFEA 376 (377)
T ss_pred EeccCCCccceeecCCCCCCHHHHHhccCCCCEEEEEeCC--CCHHHHHHHHHHHHhc
Confidence 32222221 124555444 4677777777777764
No 282
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.69 E-value=1.8e-14 Score=139.28 Aligned_cols=307 Identities=19% Similarity=0.179 Sum_probs=191.7
Q ss_pred HHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchh
Q 011856 118 DQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADP 197 (476)
Q Consensus 118 p~v~~a~~~~l~~~~~~~~~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~ 197 (476)
.+..+++.+.++.+.... -+...++.+.+++++ +...++.++|||.|++.+++.. ...+++.||+..-+|-.....
T Consensus 15 ~~e~~~v~~vl~sg~i~~--G~~v~~FE~~~ae~~-G~k~ava~~sgT~AL~laL~al-~ig~GDeVI~ps~TfvATan~ 90 (374)
T COG0399 15 EEELAAVQEVLKSGWLTG--GPFVRRFEQAFAEYL-GVKYAVAVSSGTAALHLALLAL-AIGPGDEVIVPSFTFVATANA 90 (374)
T ss_pred hHHHHHHHHHHHcCCeec--ChHHHHHHHHHHHHh-CCCeEEEecChHHHHHHHHHhc-CCCCCCEEEecCCchHHHHHH
Confidence 567778888888764333 334455666666666 8899999999999999999943 356778888887777664444
Q ss_pred HHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHH
Q 011856 198 FLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITK 277 (476)
Q Consensus 198 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~ 277 (476)
.+..+..++...--|....+ |++.+|+.|+. ++++||.-...|. .+. ++.|.+||+
T Consensus 91 i~~~Ga~PVFvDid~~T~ni--------------d~~~ie~aIt~---~tKAIipVhl~G~---~~d----m~~i~~la~ 146 (374)
T COG0399 91 VLLVGAKPVFVDIDPDTLNI--------------DPDLIEAAITP---RTKAIIPVHLAGQ---PCD----MDAIMALAK 146 (374)
T ss_pred HHHcCCeEEEEecCCcccCC--------------CHHHHHHHccc---CCeEEEEehhccC---CCC----HHHHHHHHH
Confidence 43333333322111222222 89999999985 4888888877654 455 999999999
Q ss_pred HhCCEEEEecccc-Cc-cccccchhhccCCCCchhhhh----hhcCCCCcEEEEEec-HHHHHhhc---CCCCc------
Q 011856 278 ENGALLIFDEVMT-GF-RLAYGGAQEYFGVTPDLTTLG----KIIGGGLPVGAYGGR-RDIMEMVA---PAGPM------ 341 (476)
Q Consensus 278 ~~g~llI~DEv~~-g~-r~g~~~~~~~~g~~pDi~t~s----K~lg~G~~iG~~~~~-~~i~~~l~---~~~~~------ 341 (476)
+||++||.|-+|+ |- +.|+ ..|-.-|+.+|| |.++.| -.|+++.+ +++.+.++ ..+..
T Consensus 147 ~~~l~vIEDaAqa~Ga~y~gk-----~vGt~Gd~~~fSF~~~K~ittg-EGGav~tnd~ela~k~~~lr~hG~~~~~~~~ 220 (374)
T COG0399 147 RHGLPVIEDAAQAHGATYKGK-----KVGSFGDIGAFSFHATKNLTTG-EGGAVVTNDEELAEKARSLRNHGLSRDAVFK 220 (374)
T ss_pred HcCCeEEEEcchhccCeecCc-----ccccccceEEEEecCCCCcccc-CceEEEeCCHHHHHHHHHHHHhCcCCCcccc
Confidence 9999999999994 33 3332 122233566554 999976 67777775 55665554 21111
Q ss_pred -c---ccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCceEeee---eceeEEEEEecCCCc
Q 011856 342 -Y---QAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGY---ISGMFGFFFTEGPVY 414 (476)
Q Consensus 342 -~---~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~---~g~~~~i~~~~~~~~ 414 (476)
. .+..+..+-+.++.+++.|+.+ +++.++-+++.+++.+.|+++.. ...+....+ .-.++.+.+...
T Consensus 221 y~~~~~G~N~rm~~iqAAigl~QL~~l--~~~~~~R~~~a~~Y~~~l~~~~~-~~~p~~~~~~~~~~~~~~i~~~~~--- 294 (374)
T COG0399 221 YLHEELGYNYRLTEIQAAIGLAQLERL--DEINERRREIAQIYAEALKGLPG-ITLPPEPDGAVHAWHLYTILVDEE--- 294 (374)
T ss_pred ceeeecccccCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhhcCCC-ccccCCCCCceeeeeeeEEEecCC---
Confidence 1 1233445566777777777655 56777777888888888876531 111111111 111222222211
Q ss_pred CchhhcccchHHHHHHHHHHHHCCe----EeccCCC-----------------------cceEEe--CCCcHHHHHHHHH
Q 011856 415 NFEDAKKSETTKFARFYRGMLEEGV----YFAPSQF-----------------------EAGFTS--LAHSSDDIQHTIT 465 (476)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~l~~~Gv----~~~~~~~-----------------------~~~~~~--~~~t~e~i~~~~~ 465 (476)
....+.+.+.|.++|| +..|... ..++++ ...+++|+++.++
T Consensus 295 ---------~~~R~~l~~~L~~~gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP~~p~l~~~~~~~V~~ 365 (374)
T COG0399 295 ---------GISRDALMESLKEAGVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSERILSLPLHPNLSEEDVDRVIE 365 (374)
T ss_pred ---------CCCHHHHHHHHHhCCCCceEEeeccccchhhhcccccccCCCchHHHHhhCeEEccCCCCCCHHHHHHHHH
Confidence 1123577888888854 4444210 012343 5679999999999
Q ss_pred HHHHHHHH
Q 011856 466 AAEKVKMR 473 (476)
Q Consensus 466 ~l~~~~~~ 473 (476)
+|++++..
T Consensus 366 ~l~~~~~~ 373 (374)
T COG0399 366 ALKEVLGS 373 (374)
T ss_pred HHHHHhcc
Confidence 99998764
No 283
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.69 E-value=9.7e-15 Score=145.88 Aligned_cols=236 Identities=15% Similarity=0.136 Sum_probs=154.8
Q ss_pred CCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhh-cCCCCccCCCCCC
Q 011856 136 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVK-AGSGVATLGLPDS 214 (476)
Q Consensus 136 ~~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~-~g~~~~~~~~~~~ 214 (476)
++++...+|+++++++.+. +..++++||++|+..++... ...++.|++..+.|++........ ...
T Consensus 57 ~~~p~~~~Le~~lA~l~g~-~~~v~~~sG~~Ai~~~l~al--l~pGD~Vvv~~p~Y~~t~~~~~~~~~~~---------- 123 (405)
T PRK08776 57 SGNPTRDLLGEALAELEGG-AGGVITATGMGAINLVLNAL--LQPGDTLVVPHDAYGGSWRLFNALAKKG---------- 123 (405)
T ss_pred CCChHHHHHHHHHHHHhCC-CceEEEcCHHHHHHHHHHHH--hCCCCEEEEccCCchHHHHHHHHHHHhc----------
Confidence 4556667888888888744 55677888999999888742 345677888888887633211111 011
Q ss_pred CCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccC-cc
Q 011856 215 PGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTG-FR 293 (476)
Q Consensus 215 ~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g-~r 293 (476)
+ ..+..++..|+++|++.++. ++++|+++..+|++|.+.+ +++|.++|++||+++|+||+|.. ..
T Consensus 124 -g------~~v~~v~~~d~~~l~~~i~~---~tklV~l~~P~NPtG~v~d----l~~I~~la~~~gi~vIvD~a~a~~~~ 189 (405)
T PRK08776 124 -H------FALITADLTDPRSLADALAQ---SPKLVLIETPSNPLLRITD----LRFVIEAAHKVGALTVVDNTFLSPAL 189 (405)
T ss_pred -C------cEEEEECCCCHHHHHHhcCc---CCeEEEEECCCCCCCccCC----HHHHHHHHHHcCCEEEEECCCccccc
Confidence 1 12444555689999998863 5778888777778888877 99999999999999999999952 11
Q ss_pred ccccchhhccCCCCchh--hhhhhcCC--CCcEEEEEe-cHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCC
Q 011856 294 LAYGGAQEYFGVTPDLT--TLGKIIGG--GLPVGAYGG-RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPG 368 (476)
Q Consensus 294 ~g~~~~~~~~g~~pDi~--t~sK~lg~--G~~iG~~~~-~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~ 368 (476)
. ..+....|++ +.+|.+++ ++..|++++ ++++.+.+.. ......+..+|+.+.+.+..++.+ +.
T Consensus 190 ~------~pl~~gaDivv~S~tK~l~g~~~~~~G~vv~~~~~l~~~l~~---~~~~~g~~~s~~~a~l~~~gl~tl--~~ 258 (405)
T PRK08776 190 Q------KPLEFGADLVLHSTTKYINGHSDVVGGAVVARDAELHQQLVW---WANALGLTGSPFDAFLTLRGLRTL--DA 258 (405)
T ss_pred C------CcccccCCEEEecCceeecCCCCceEEEEEeCCHHHHHHHHH---HHHhcCCCCCHHHHHHHHhhhCcH--HH
Confidence 1 1111234665 57899984 467888866 5677776642 111123356888888777666544 45
Q ss_pred HHHHHHHHHHHHHHHHHHHhh--h--cCC-c---------eEeeeeceeEEEEEe
Q 011856 369 TYEYLNKITGELTQGIIDAGK--K--AGH-A---------ICGGYISGMFGFFFT 409 (476)
Q Consensus 369 ~~~~~~~~~~~l~~~L~~~~~--~--~~~-~---------~~v~~~g~~~~i~~~ 409 (476)
..++..++...+.+.|++.-. + +|. . ....+.|.|+.|++.
T Consensus 259 r~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~ 313 (405)
T PRK08776 259 RLRVHQENADAIAALLDGHAAVNQVYYPGLASHPGHALAARQQKGFGAMLSFELE 313 (405)
T ss_pred HHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCcCHHHHHhcCCCCceEEEEEEc
Confidence 667777788887777775310 0 110 0 012467889999985
No 284
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.68 E-value=2.9e-14 Score=137.61 Aligned_cols=319 Identities=17% Similarity=0.144 Sum_probs=201.2
Q ss_pred cHHHHHHHHHHHHhcCCCC-CCCHHHHHHHHHHHhhCCC--CCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCC
Q 011856 117 DDQVLAALGETMKKGTSFG-APCLLENVLAEMVISAVPS--IEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHG 193 (476)
Q Consensus 117 ~p~v~~a~~~~l~~~~~~~-~~~~~~~~la~~l~~~~~~--~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg 193 (476)
+|+|++|+.+..-. +.. -......++.+.|...+.. .+-+++..||+-++|+++.. ...++++|++...+.+|
T Consensus 17 ~~~V~~am~~~~~~--h~s~~F~~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~s--l~~pgdkVLv~~nG~FG 92 (383)
T COG0075 17 PPRVLLAMARPMVG--HRSPDFVGIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVAS--LVEPGDKVLVVVNGKFG 92 (383)
T ss_pred CHHHHHHhcCCCCC--CCCHHHHHHHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHHh--ccCCCCeEEEEeCChHH
Confidence 67777777654322 111 1234556777777777763 35677789999999999984 33467899999888888
Q ss_pred CchhHHh-hcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHH
Q 011856 194 HADPFLV-KAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAI 272 (476)
Q Consensus 194 ~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l 272 (476)
....-+. ..|..+..+..+....+ |++++++.|+++ +++++|.+-.+-..+|...| +++|
T Consensus 93 ~R~~~ia~~~g~~v~~~~~~wg~~v--------------~p~~v~~~L~~~-~~~~~V~~vH~ETSTGvlnp----l~~I 153 (383)
T COG0075 93 ERFAEIAERYGAEVVVLEVEWGEAV--------------DPEEVEEALDKD-PDIKAVAVVHNETSTGVLNP----LKEI 153 (383)
T ss_pred HHHHHHHHHhCCceEEEeCCCCCCC--------------CHHHHHHHHhcC-CCccEEEEEeccCcccccCc----HHHH
Confidence 6554433 33444433222211111 899999999964 35667777776677899999 9999
Q ss_pred HHHHHHhCCEEEEeccccCccccccchhhccCCCCchhhhhhhcCCCCcEEEEEecHHHHHhhcCCCCc--c--------
Q 011856 273 RRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPM--Y-------- 342 (476)
Q Consensus 273 ~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pDi~t~sK~lg~G~~iG~~~~~~~i~~~l~~~~~~--~-------- 342 (476)
.++|++||+++|+|-|-+ | -|...-.+.+|++.-+..--|++++---+|.+..+++..+.+...... +
T Consensus 154 ~~~~k~~g~l~iVDaVsS-~-Gg~~~~vd~wgiDv~itgSQK~l~~PPGla~v~~S~~a~e~~~~~~~~~~ylDL~~~~~ 231 (383)
T COG0075 154 AKAAKEHGALLIVDAVSS-L-GGEPLKVDEWGIDVAITGSQKALGAPPGLAFVAVSERALEAIEERKHPSFYLDLKKWLK 231 (383)
T ss_pred HHHHHHcCCEEEEEeccc-C-CCcccchhhcCccEEEecCchhccCCCccceeEECHHHHHHHhcCCCCceeecHHHHHH
Confidence 999999999999998775 2 122344455666333334569998422378888899888877643211 1
Q ss_pred -----ccCCCCCcHHHHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCc
Q 011856 343 -----QAGTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVY 414 (476)
Q Consensus 343 -----~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~ 414 (476)
....++.+.....+..++|+.+.+ ++..++.+++.+.+++++++++.+.-. .+-.....+..+..
T Consensus 232 ~~~~~~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~alGl~~~~-~~~~~s~tvta~~~------ 304 (383)
T COG0075 232 YMEKKGSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEALGLELFA-DPERRSPTVTAIKV------ 304 (383)
T ss_pred HHhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcCCcccc-CcccCCCceEEEEC------
Confidence 122334444555666688888776 556777778888888888876433211 00011111222222
Q ss_pred CchhhcccchHHHHHHHHHHH-HCCeEeccCCC----cceEE--eCCCcHHHHHHHHHHHHHHHHHh
Q 011856 415 NFEDAKKSETTKFARFYRGML-EEGVYFAPSQF----EAGFT--SLAHSSDDIQHTITAAEKVKMRF 474 (476)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~~----~~~~~--~~~~t~e~i~~~~~~l~~~~~~~ 474 (476)
|+......+...++ +.|+.+.++.. ..+|+ .-..+.+++..++.+|+.++.++
T Consensus 305 -------P~g~~~~~~~~~~~~~~g~~i~gg~~~l~gkifRIGhMG~~~~~dv~~~l~ale~~L~~~ 364 (383)
T COG0075 305 -------PEGVDDKKVRRALLKEYGVEIAGGQGPLKGKIFRIGHMGNVRPEDVLAALAALEAALREL 364 (383)
T ss_pred -------CCCCCcHHHHHHHHHhCCEEecccccccCccEEEEecCccCCHHHHHHHHHHHHHHHHHc
Confidence 22211123333455 45898887743 24677 23678999999999999998764
No 285
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.68 E-value=1e-14 Score=145.98 Aligned_cols=217 Identities=16% Similarity=0.163 Sum_probs=145.4
Q ss_pred CCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCC
Q 011856 136 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 215 (476)
Q Consensus 136 ~~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~ 215 (476)
++.+...+|.+.++++. +.+..++++||+.|+..+++. ....+++||+..+.| +.+.......-
T Consensus 62 ~~~p~~~~le~~lA~l~-g~~~~i~~~sG~~Al~~~l~~--ll~~Gd~Viv~~~~y-~~t~~~~~~~~------------ 125 (403)
T PRK07503 62 ISNPTLALLEQRMASLE-GGEAAVALASGMGAITATLWT--LLRPGDEVIVDQTLY-GCTFAFLHHGL------------ 125 (403)
T ss_pred CCCchHHHHHHHHHHHh-CCCcEEEEcCHHHHHHHHHHH--HcCCCCEEEEccCcc-chHHHHHHHHH------------
Confidence 35666788888888887 445678888999999999874 244567777766655 43332221100
Q ss_pred CCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccc
Q 011856 216 GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLA 295 (476)
Q Consensus 216 ~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g 295 (476)
...+.++..++.+|++++++.++. ++++|++|.++|++|.+.+ +++|.++|++||++||+|++|.....+
T Consensus 126 ---~~~G~~v~~vd~~d~~~l~~~i~~---~tklV~le~p~NPtG~~~d----i~~I~~la~~~gi~lIvD~a~a~~~~~ 195 (403)
T PRK07503 126 ---GEFGVTVRHVDLTDPAALKAAISD---KTRMVYFETPANPNMRLVD----IAAVAEIAHGAGAKVVVDNTYCTPYLQ 195 (403)
T ss_pred ---hhCCEEEEEeCCCCHHHHHHhcCc---cCcEEEEeCCCCCCCeeeC----HHHHHHHHHHcCCEEEEECCCcccccC
Confidence 001113455556689999998864 5788888888888898888 999999999999999999999532111
Q ss_pred ccchhhccCCCCchh--hhhhhcCC-C-CcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHHH
Q 011856 296 YGGAQEYFGVTPDLT--TLGKIIGG-G-LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYE 371 (476)
Q Consensus 296 ~~~~~~~~g~~pDi~--t~sK~lg~-G-~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~ 371 (476)
. ..+...|++ +++|.+++ | +++|++++++++++.++... .........+++.++.++..|+.+ +...+
T Consensus 196 ~-----~l~~g~Di~v~S~tK~l~g~gd~~gG~v~~~~~l~~~l~~~~-~~~~~g~~~s~~~a~l~l~~L~tl--~~r~~ 267 (403)
T PRK07503 196 R-----PLELGADLVVHSATKYLGGHGDITAGLVVGGKALADRIRLEG-LKDMTGAVMSPFDAFLLMRGLKTL--ALRMD 267 (403)
T ss_pred C-----chhhCCCEEEccccccccCCCceeEEEEEcCHHHHHHHHhhh-HHhCcCCCCCHHHHHHHHcCcchH--HHHHH
Confidence 1 112334655 68899995 5 78898998999888775210 011123466788877777666544 33445
Q ss_pred HHHHHHHHHHHHHHH
Q 011856 372 YLNKITGELTQGIID 386 (476)
Q Consensus 372 ~~~~~~~~l~~~L~~ 386 (476)
+..++...+.+.|++
T Consensus 268 ~~~~na~~~a~~L~~ 282 (403)
T PRK07503 268 RHCASAQAVAEWLAR 282 (403)
T ss_pred HHHHHHHHHHHHHHh
Confidence 555667777777665
No 286
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.68 E-value=3e-14 Score=145.49 Aligned_cols=279 Identities=18% Similarity=0.198 Sum_probs=163.0
Q ss_pred HHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhh----cCCCCccCCCCCCCCC
Q 011856 143 VLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVK----AGSGVATLGLPDSPGV 217 (476)
Q Consensus 143 ~la~~l~~~~~-~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~----~g~~~~~~~~~~~~~~ 217 (476)
++.++++++++ ..+++.+++||+++++.++.. +...++++|++.++ .|.++...+.. .|..+...+.... .
T Consensus 116 e~~~~la~l~g~~~~~v~~~~g~t~~~~~~~~a-~~~~~g~~Vlv~~~-~~~~~~~~~~~~~~~~G~~~~~v~~~~~-~- 191 (447)
T PRK00451 116 EYQTMICELTGMDVANASMYDGATALAEAALMA-VRITKRKKVLVSGA-VHPEYREVLKTYLKGQGIEVVEVPYEDG-V- 191 (447)
T ss_pred HHHHHHHHHhCCCcceEEecCcHHHHHHHHHHH-HHhcCCCEEEEeCc-cCHHHHHHHHHHHHhCCcEEEEecCCCC-C-
Confidence 44466688876 456899999999988877763 23345677777654 55545444332 2332222211100 1
Q ss_pred CCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEE--eccccCcccc
Q 011856 218 PKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF--DEVMTGFRLA 295 (476)
Q Consensus 218 ~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~--DEv~~g~r~g 295 (476)
-|+++|++.++. ++++|++... +++|.+.+ +++|.++|+++|+++|+ |.+..|+.
T Consensus 192 -------------~d~~~l~~~i~~---~t~~v~l~~p-n~tG~v~~----l~~I~~~a~~~~~~~iv~~d~~~~g~~-- 248 (447)
T PRK00451 192 -------------TDLEALEAAVDD---DTAAVVVQYP-NFFGVIED----LEEIAEIAHAGGALFIVGVDPVSLGLL-- 248 (447)
T ss_pred -------------CCHHHHHHhcCC---CeEEEEEECC-CCCCeeCC----HHHHHHHHHHCCCEEEEEcChHHhccC--
Confidence 178999998863 5777777665 56899888 99999999999999998 65543321
Q ss_pred ccchhhccCCCCchh-----hhhhhcC-CCCcEEEEEecHHHHHhhcCC------------------------CCccc-c
Q 011856 296 YGGAQEYFGVTPDLT-----TLGKIIG-GGLPVGAYGGRRDIMEMVAPA------------------------GPMYQ-A 344 (476)
Q Consensus 296 ~~~~~~~~g~~pDi~-----t~sK~lg-~G~~iG~~~~~~~i~~~l~~~------------------------~~~~~-~ 344 (476)
.... ....|++ .+||.+. +|+++|++.+++++++.+.+. .+..+ .
T Consensus 249 --~~~~--~~~~D~~~~s~~k~~~~~~~~Gpg~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (447)
T PRK00451 249 --KPPG--EYGADIVVGEGQPLGIPLSFGGPYLGFFATRKKLVRQMPGRLVGETVDADGKRGFVLTLQAREQHIRREKAT 324 (447)
T ss_pred --CCcc--cCCCCEEEECCCcCCCCCCCCCCCchHHHhhHHHHhhCCCCEeeeecccCCCeeeEeecccccccccccccc
Confidence 0011 1234665 3667766 678899999999988875210 00011 1
Q ss_pred CCCCCcHHHH-HHHHHHHHHhcC---CCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEE-EEecCCCcCchhh
Q 011856 345 GTLSGNPLAM-TAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGF-FFTEGPVYNFEDA 419 (476)
Q Consensus 345 ~t~~~~~~~~-aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i-~~~~~~~~~~~~~ 419 (476)
.+++.+...+ .++..+++.+.+ ++..+++.++.+++.++|+++. ++ .+. .+.++.+ .+.-+
T Consensus 325 ~~~~~~~~~~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~---g~--~~~-~~~~~~~~~v~~~-------- 390 (447)
T PRK00451 325 SNICTNQALNALAAAIYMSLLGPEGLRELAEQNHQKAHYLAERLAEIG---GV--ELF-DGPFFNEFVVRLP-------- 390 (447)
T ss_pred ccccccHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhhcC---CE--Eec-CCCeEEEEEEecC--------
Confidence 1222222122 233334443332 4556677777777777777642 11 111 1222221 11100
Q ss_pred cccchHHHHHHHHHHHHCCeEec----cCC---CcceEEeC--CCcHHHHHHHHHHHHHHH
Q 011856 420 KKSETTKFARFYRGMLEEGVYFA----PSQ---FEAGFTSL--AHSSDDIQHTITAAEKVK 471 (476)
Q Consensus 420 ~~~~~~~~~~~~~~l~~~Gv~~~----~~~---~~~~~~~~--~~t~e~i~~~~~~l~~~~ 471 (476)
. ...++.+.|+++|+... +.. ...+|++. .+|+++++++++.|++++
T Consensus 391 ---~--~~~~~~~~L~~~gi~~~~~~~~~~~~~~~~~rvs~~~~~t~e~i~~l~~~L~~~~ 446 (447)
T PRK00451 391 ---K--PAEEVNEALLEKGILGGYDLGRYYPELGNHLLVCVTEKRTKEDIDALVAALGEVL 446 (447)
T ss_pred ---C--CHHHHHHHHHhcCCCCCcccccccCCcCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 0 12578899999987642 111 13456654 589999999999998764
No 287
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.67 E-value=9.5e-15 Score=144.73 Aligned_cols=237 Identities=15% Similarity=0.128 Sum_probs=152.4
Q ss_pred CCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCC
Q 011856 136 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 215 (476)
Q Consensus 136 ~~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~ 215 (476)
++++...+|.++++++. +.+.+++++||++|+..++... ...++.|++.++.|.+........... .
T Consensus 50 ~~npt~~~Le~~lA~le-g~e~ivvt~gg~~Ai~~~l~al--l~~Gd~Il~~~~~y~~~~~~~~~~~~~----------~ 116 (388)
T PRK08861 50 SGNPNRGLLEQTLSELE-SGKGAVVTNCGTSALNLWVSAL--LGPDDLIVAPHDCYGGTYRLFNTRANK----------G 116 (388)
T ss_pred CCCchHHHHHHHHHHHh-CCCeEEEECCHHHHHHHHHHHH--cCCCCEEEEcCCchHHHHHHHHHHHhc----------C
Confidence 45666788888888888 5799999999999999999842 345677877777776533222111100 0
Q ss_pred CCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-Cccc
Q 011856 216 GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GFRL 294 (476)
Q Consensus 216 ~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~r~ 294 (476)
++ .+..++..|++++++.++. ++++|++|.++|++|.+.+ +++|.++|+++|+++|+||+|. ++..
T Consensus 117 gi------~v~~vd~~d~e~l~~~i~~---~tklV~lesP~NPtG~v~d----l~~I~~la~~~gi~vIvDea~~~~~~~ 183 (388)
T PRK08861 117 DF------KVQFVDQSDAAALDAALAK---KPKLILLETPSNPLVRVVD----IAELCQKAKAVGALVAVDNTFLTPVLQ 183 (388)
T ss_pred Ce------EEEEECCCCHHHHHHhcCc---CCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEEEECCccccccC
Confidence 11 2333444588999988863 5788888888888899998 8999999999999999999995 3211
Q ss_pred cccchhhccCCCCchh--hhhhhcCC--CCcEEEEEec-HHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCH
Q 011856 295 AYGGAQEYFGVTPDLT--TLGKIIGG--GLPVGAYGGR-RDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGT 369 (476)
Q Consensus 295 g~~~~~~~~g~~pDi~--t~sK~lg~--G~~iG~~~~~-~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~ 369 (476)
..+....|++ +++|.++| ++..|+++++ +++.+.++.. ........+|..+...+..|+-+ .-.
T Consensus 184 ------~pl~~GaDivv~S~tK~l~G~~d~~gG~i~~~~~~~~~~~~~~---~~~~G~~~~p~~a~l~~rgl~Tl--~lR 252 (388)
T PRK08861 184 ------KPLELGADFVIHSTTKYINGHSDVIGGVLITKTKEHAEELAWW---GNCIGATGTPFDSYMTLRGIRTL--GAR 252 (388)
T ss_pred ------CCcccCCCEEEeecceeccCCCcceeEEEEecHHHHHHHHHHH---HhccCCCCChHHHHHHHhcCCCH--HHH
Confidence 1122335766 57899985 3668888774 5566655421 11112345677666554444322 334
Q ss_pred HHHHHHHHHHHHHHHHHHhh----hcC-Cc---------eEeeeeceeEEEEEe
Q 011856 370 YEYLNKITGELTQGIIDAGK----KAG-HA---------ICGGYISGMFGFFFT 409 (476)
Q Consensus 370 ~~~~~~~~~~l~~~L~~~~~----~~~-~~---------~~v~~~g~~~~i~~~ 409 (476)
.++..++...+.+.|++.-. .|| ++ ....+.|.|+.|++.
T Consensus 253 ~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~gg~~sf~~~ 306 (388)
T PRK08861 253 MRVHEESAQQILAYLQTQSLVGTIYHPSLPEHPGHEIAKKQQSGFGSMLSFEFA 306 (388)
T ss_pred HHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhCCCCCceEEEEeC
Confidence 45566666666666665310 011 00 023467889999985
No 288
>PRK05968 hypothetical protein; Provisional
Probab=99.67 E-value=1.3e-14 Score=144.70 Aligned_cols=249 Identities=17% Similarity=0.162 Sum_probs=157.1
Q ss_pred CCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhH---HhhcCCCCccCCCC
Q 011856 136 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPF---LVKAGSGVATLGLP 212 (476)
Q Consensus 136 ~~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~---~~~~g~~~~~~~~~ 212 (476)
+..+...+|.++++++. +.+..++++||+.|+..++.. ....+++|++....|++..... +...|.
T Consensus 60 ~~~p~~~~le~~lA~l~-g~~~av~~~sG~~Ai~~al~a--l~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~-------- 128 (389)
T PRK05968 60 GDNPTVRAFEEMLAKLE-GAEDARGFASGMAAISSTVLS--FVEPGDRIVAVRHVYPDAFRLFETILKRMGV-------- 128 (389)
T ss_pred CCChhHHHHHHHHHHHh-CCCcEEEECCHHHHHHHHHHH--HhCCCCEEEEeCCCchHHHHHHHHHHHHcCc--------
Confidence 34566788999998888 555677779999999998874 2345677888887777643221 111121
Q ss_pred CCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc
Q 011856 213 DSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF 292 (476)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~ 292 (476)
++..++.+|++++++.+. ++++|++|.+.+..+.+.+ +++|.++|++||+++|+|++|...
T Consensus 129 -----------~v~~vd~~d~~~l~~~i~----~tklV~ie~pt~~~~~~~d----l~~i~~la~~~gi~vivD~a~a~~ 189 (389)
T PRK05968 129 -----------EVDYVDGRDEEAVAKALP----GAKLLYLESPTSWVFELQD----VAALAALAKRHGVVTMIDNSWASP 189 (389)
T ss_pred -----------eEEEeCCCCHHHHHHhcc----cCCEEEEECCCCCCCcHHH----HHHHHHHHHHcCCEEEEECCCcch
Confidence 234445558899988873 4677888866555555544 999999999999999999999532
Q ss_pred -cccccchhhccCCCCchh--hhhhhcCC-C-CcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCC
Q 011856 293 -RLAYGGAQEYFGVTPDLT--TLGKIIGG-G-LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEP 367 (476)
Q Consensus 293 -r~g~~~~~~~~g~~pDi~--t~sK~lg~-G-~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~ 367 (476)
... . . ..| .|++ +++|.+++ | ++.|++++++++++.++.......+ ...++..++.++..|+.+ +
T Consensus 190 ~~~~-p--~-~~g--~Divv~S~tK~l~g~~~~~gG~i~~~~~~~~~l~~~~~~~~g--~~~~~~~A~~~l~~L~tl--~ 259 (389)
T PRK05968 190 VFQR-P--I-TLG--VDLVIHSASKYLGGHSDTVAGVVAGSKEHIARINAEAYPYLG--AKLSPFEAWLLLRGLRTL--P 259 (389)
T ss_pred hccC-c--h-hcC--CcEEEeeccccccCCCCeEEEEEEECHHHHHHHHHHHHHhCC--CCCChHHHHHHHcccCcH--H
Confidence 111 1 1 123 3655 68899985 4 5788888899988776531111112 245676666665555433 3
Q ss_pred CHHHHHHHHHHHHHHHHHHHhhhcCCceEe-------------eeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHH
Q 011856 368 GTYEYLNKITGELTQGIIDAGKKAGHAICG-------------GYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGM 434 (476)
Q Consensus 368 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v-------------~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l 434 (476)
...++..++..++.+.|++. +.+..+ .+.|.++.|++.+ .....+|.+.|
T Consensus 260 ~r~~~~~~~a~~la~~L~~~----p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~-------------~~~~~~f~~~L 322 (389)
T PRK05968 260 LRMKAHEASALEIARRLKAH----PVVERVCHPALANHPPAGLSGTSGLFSFIFRE-------------GIDVRAFADAL 322 (389)
T ss_pred HHHHHHHHHHHHHHHHHHhC----CCccEEECCCCCCChHHhCCCCceEEEEEECC-------------HHHHHHHHHhC
Confidence 44455555666666666543 322222 2457788888742 12235677777
Q ss_pred HHCCeEe
Q 011856 435 LEEGVYF 441 (476)
Q Consensus 435 ~~~Gv~~ 441 (476)
...++.+
T Consensus 323 ~~~~~~~ 329 (389)
T PRK05968 323 KLFRLGV 329 (389)
T ss_pred CccEEec
Confidence 6555433
No 289
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.67 E-value=1.1e-14 Score=144.04 Aligned_cols=232 Identities=15% Similarity=0.097 Sum_probs=149.1
Q ss_pred CCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhh-cCCCCccCCCCCC
Q 011856 136 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVK-AGSGVATLGLPDS 214 (476)
Q Consensus 136 ~~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~-~g~~~~~~~~~~~ 214 (476)
++++...+|.++++++. + +.+++++||++|+..++.. ....+++|++.++.|++....+... ...
T Consensus 48 y~~p~~~~Le~~lA~l~-~-~~~v~~~sG~~Ai~~~l~a--ll~~Gd~Vl~~~~~y~~~~~~~~~~l~~~---------- 113 (366)
T PRK07582 48 ASNPTWRALEAALGELE-G-AEALVFPSGMAAITAVLRA--LLRPGDTVVVPADGYYQVRALAREYLAPL---------- 113 (366)
T ss_pred CCCccHHHHHHHHHHHc-C-CCEEEECCHHHHHHHHHHH--hcCCCCEEEEeCCCcHhHHHHHHHHHhcC----------
Confidence 46666788888898888 4 5677778899999988874 2445678888888887754332111 101
Q ss_pred CCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-Ccc
Q 011856 215 PGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GFR 293 (476)
Q Consensus 215 ~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~r 293 (476)
| .++..++.++... ... +++++|++|..+|++|.+.+ +++|.++|+++|+++|+||+|. .+.
T Consensus 114 -G------~~v~~v~~~~~~~--~~~----~~t~lV~le~p~NPtg~v~d----i~~I~~~a~~~g~~lvVD~t~~~~~~ 176 (366)
T PRK07582 114 -G------VTVREAPTAGMAE--AAL----AGADLVLAETPSNPGLDVCD----LAALAAAAHAAGALLVVDNTTATPLG 176 (366)
T ss_pred -e------EEEEEECCCChHH--Hhc----cCceEEEEECCCCCCCCccC----HHHHHHHHHHcCCEEEEECCCCCccc
Confidence 1 1244444444321 222 26788888887778887877 9999999999999999999984 221
Q ss_pred ccccchhhccCCCCchh--hhhhhcCC--CCcEEEEEe-cHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCC
Q 011856 294 LAYGGAQEYFGVTPDLT--TLGKIIGG--GLPVGAYGG-RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPG 368 (476)
Q Consensus 294 ~g~~~~~~~~g~~pDi~--t~sK~lg~--G~~iG~~~~-~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~ 368 (476)
. ..+....|++ +++|.++| |+++||+++ ++++++.+.. .........+|+.+..++..|+.+ +.
T Consensus 177 ~------~p~~~g~Divv~S~sK~l~G~~g~~~G~v~~~~~~l~~~l~~---~~~~~g~~~~~~~a~l~~r~l~tl--~~ 245 (366)
T PRK07582 177 Q------RPLELGADLVVASDTKALTGHSDLLLGYVAGRDPELMAAVER---WRLLAGAIPGPFEAWLAHRSLGTL--GL 245 (366)
T ss_pred c------CchhcCCcEEEecccccccCCCCeeEEEEEcCcHHHHHHHHH---HHHHhCCCCCHHHHHHHHhccccH--HH
Confidence 1 1112334665 68899974 689999987 4777776652 111222345677776666555433 34
Q ss_pred HHHHHHHHHHHHHHHHHHHhh----hcCC-ce---------EeeeeceeEEEEEe
Q 011856 369 TYEYLNKITGELTQGIIDAGK----KAGH-AI---------CGGYISGMFGFFFT 409 (476)
Q Consensus 369 ~~~~~~~~~~~l~~~L~~~~~----~~~~-~~---------~v~~~g~~~~i~~~ 409 (476)
..++..++...+.+.|++... .+|. .. ...+.|.++.|++.
T Consensus 246 R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~ 300 (366)
T PRK07582 246 RFARQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELA 300 (366)
T ss_pred HHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeC
Confidence 457777888888888876421 0111 11 11257889999984
No 290
>PLN03032 serine decarboxylase; Provisional
Probab=99.67 E-value=4.7e-14 Score=138.38 Aligned_cols=284 Identities=14% Similarity=0.078 Sum_probs=175.4
Q ss_pred CHHHHHHHHHHHhhCC-CCCeE--EEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCC
Q 011856 138 CLLENVLAEMVISAVP-SIEMV--RFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDS 214 (476)
Q Consensus 138 ~~~~~~la~~l~~~~~-~~e~v--~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~ 214 (476)
.+.+.++.+++++.++ +++.+ +||+||||||..++..+|....++ +++....-|-+...++...+.++..++.. .
T Consensus 65 ~~~e~~v~~~ia~llg~~~~~~~G~fTsGGTEaNl~al~~ar~~~~~~-~vi~s~~~H~Sv~kaa~~lg~~~~~V~~d-~ 142 (374)
T PLN03032 65 RQFEVGVLDWFARLWELEKDEYWGYITTCGTEGNLHGILVGREVFPDG-ILYASRESHYSVFKAARMYRMEAVKVPTL-P 142 (374)
T ss_pred HHHHHHHHHHHHHHhCCCCccCCEEEeCchHHHHHHHHHHHHHhCCCc-EEEeCCCceeHHHHHHHHcCCCCeEeeeC-C
Confidence 4677788888888886 34555 999999999999999888654433 56666677776666665555443222111 1
Q ss_pred CCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhC-----CEEEEeccc
Q 011856 215 PGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENG-----ALLIFDEVM 289 (476)
Q Consensus 215 ~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g-----~llI~DEv~ 289 (476)
.+. -|+++|++.+++....+.+|++.-.+++.|.+.| +++|.++|++|| +++++|-+|
T Consensus 143 ~g~-------------id~~~L~~~i~~~~~~~~lvv~tagtt~tG~idp----i~eI~~i~~~~g~~~~~~~lHvDaA~ 205 (374)
T PLN03032 143 SGE-------------IDYDDLERALAKNRDKPAILNVNIGTTVKGAVDD----LDRILRILKELGYTEDRFYIHCDGAL 205 (374)
T ss_pred CCc-------------CcHHHHHHHHHHcCCCCEEEEEEecCcCCccCCC----HHHHHHHHHHhCCCCCCeeEEEEccc
Confidence 111 1899999999864335667777777788999999 999999999997 589999999
Q ss_pred cCc-cc--c--ccchhhccCCCCchhhhh--hhcCCCCcEEEEEecHHHHHhhcCCCCccc--cCCCCCc--HHHHHHHH
Q 011856 290 TGF-RL--A--YGGAQEYFGVTPDLTTLG--KIIGGGLPVGAYGGRRDIMEMVAPAGPMYQ--AGTLSGN--PLAMTAGI 358 (476)
Q Consensus 290 ~g~-r~--g--~~~~~~~~g~~pDi~t~s--K~lg~G~~iG~~~~~~~i~~~l~~~~~~~~--~~t~~~~--~~~~aaa~ 358 (476)
.|+ -. . ..+. +....|.++++ |.++...++|.++.+++.++.+.....+.. ..|..++ ....++..
T Consensus 206 gg~~~p~~~~~~~~~---~~~~vDSis~s~HK~~g~P~g~G~ll~r~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~~l~~w 282 (374)
T PLN03032 206 FGLMMPFVSRAPEVT---FRKPIGSVSVSGHKFLGCPMPCGVALTRKKHVKALSQNVEYLNSRDATIMGSRNGHAPLYLW 282 (374)
T ss_pred hhhhhhccCCCcccC---CCcCCcEEEECcccccCCCcCeEEEEEEchhhHhhccCCcccCCCCCcccCCCchHHHHHHH
Confidence 765 21 0 0111 11235766655 866656779999998887766543211111 1123333 23444555
Q ss_pred HHHHHhcC---CCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHH
Q 011856 359 HTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML 435 (476)
Q Consensus 359 aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 435 (476)
++|+.+.. .+..++..++.+++.++|++. +......... ..+.|..+ .. . . +
T Consensus 283 ~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~----~~~~~~~p~~--~~V~f~~~-----------~~---~----~-~ 337 (374)
T PLN03032 283 YTLRRKGYRGIKRDVQHCMRNAHYLKDRLTEA----GLTCRLNELS--STVVFERP-----------MD---E----A-F 337 (374)
T ss_pred HHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC----CCcEEECCCc--eEEEEcCC-----------Cc---H----h-H
Confidence 66666554 456677777888888888764 2221111122 22333321 11 1 1 2
Q ss_pred HCCeEeccCCCcce--EEeCCCcHHHHHHHHHHHHH
Q 011856 436 EEGVYFAPSQFEAG--FTSLAHSSDDIQHTITAAEK 469 (476)
Q Consensus 436 ~~Gv~~~~~~~~~~--~~~~~~t~e~i~~~~~~l~~ 469 (476)
.+|-.+.+.. ..+ .+...++++.+|++++-|++
T Consensus 338 ~~~w~l~~~~-~~~hi~vm~~~~~~~id~fi~dl~~ 372 (374)
T PLN03032 338 IKKWQLACEG-DIAHVVVMPNVTVEKLDEFVEELVE 372 (374)
T ss_pred hheeeecccC-CEEEEEECCCCCHHHHHHHHHHHhc
Confidence 2455454432 233 33455788999999998875
No 291
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.67 E-value=8.8e-15 Score=144.81 Aligned_cols=235 Identities=13% Similarity=0.136 Sum_probs=151.8
Q ss_pred CHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCC
Q 011856 138 CLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGV 217 (476)
Q Consensus 138 ~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~ 217 (476)
++...+|++.++++. +.+.+++++||++|+..++... ...+++||+.++.|.+......... ...|
T Consensus 60 npt~~~Le~~iA~le-~~~~~~~~~sG~~Ai~~~l~al--l~~GD~Vvv~~~~Y~~t~~l~~~~l----------~~~G- 125 (394)
T PRK09028 60 TPTHFAFQAAIVELE-GGAGTALYPSGAAAISNALLSF--LKAGDHLLMVDSCYEPTRDLCDKIL----------KGFG- 125 (394)
T ss_pred CchHHHHHHHHHHHh-CCCcEEEECCHHHHHHHHHHHH--hCCCCEEEEECCCcHHHHHHHHHhh----------hhcc-
Confidence 344567888888776 4567899999999999998742 4567889988888866433211000 0011
Q ss_pred CCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-Cccccc
Q 011856 218 PKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GFRLAY 296 (476)
Q Consensus 218 ~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~r~g~ 296 (476)
.++..++.++.+.+++.++. ++++|++|.+.|++|.+.+ +++|.++|++||+++|+|++|. ++
T Consensus 126 -----i~v~~v~~~~~e~l~~~l~~---~TklV~lespsNPtg~v~d----l~~I~~la~~~g~~lvvD~t~a~p~---- 189 (394)
T PRK09028 126 -----IETTYYDPMIGEGIRELIRP---NTKVLFLESPGSITMEVQD----VPTLSRIAHEHDIVVMLDNTWASPI---- 189 (394)
T ss_pred -----eEEEEECCCCHHHHHHhcCc---CceEEEEECCCCCCCcHHH----HHHHHHHHHHcCCEEEEECCccccc----
Confidence 12334445567888888853 6889999998888888877 9999999999999999999994 32
Q ss_pred cchhhccCCCCchh--hhhhhcCC-C-CcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHHHH
Q 011856 297 GGAQEYFGVTPDLT--TLGKIIGG-G-LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEY 372 (476)
Q Consensus 297 ~~~~~~~g~~pDi~--t~sK~lg~-G-~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~ 372 (476)
.+..+....|++ +..|.++| | .-.|+++.++++.+.+.... ... + ...+|..+...+..|+-+ .-.+++
T Consensus 190 --~~~Pl~~GaDivv~S~tK~l~Gh~d~~~G~~~~~~~~~~~l~~~~-~~~-G-~~~~p~~a~l~~rgl~TL--~lR~~~ 262 (394)
T PRK09028 190 --NSRPFEMGVDISIQAATKYIVGHSDVMLGTATANEKHWDQLREHS-YLM-G-QCTSPDDVYLAMRGLRTL--GVRLAQ 262 (394)
T ss_pred --cCCccccCceEEEEeCCeEecCCCCEEEEEEECCHHHHHHHHHHH-Hhc-C-CCCCHHHHHHHHcccCcH--HHHHHH
Confidence 122223345766 68899985 3 66787777887766554210 111 2 245666666555444322 334566
Q ss_pred HHHHHHHHHHHHHHHhh----hcC-Cc---------eEeeeeceeEEEEEe
Q 011856 373 LNKITGELTQGIIDAGK----KAG-HA---------ICGGYISGMFGFFFT 409 (476)
Q Consensus 373 ~~~~~~~l~~~L~~~~~----~~~-~~---------~~v~~~g~~~~i~~~ 409 (476)
..++...+.+.|++... .|| +. ....+.|.|+.|++.
T Consensus 263 ~~~na~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~ 313 (394)
T PRK09028 263 HEKNALKVANWLATRPEVDHVRHPAFETCPGHEFFKRDFSGSNGLFSFVLK 313 (394)
T ss_pred HHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhccCCCceEEEEEC
Confidence 66677777777765321 011 00 012467889999985
No 292
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.67 E-value=4.1e-14 Score=144.12 Aligned_cols=317 Identities=15% Similarity=0.062 Sum_probs=177.8
Q ss_pred CcHHHHHHHHHHHHhcCCCCCC-------CHHHH----HHHHHHHhhCC-CCCeEEEe---CCHHHHHHHHHHHHHhccC
Q 011856 116 ADDQVLAALGETMKKGTSFGAP-------CLLEN----VLAEMVISAVP-SIEMVRFV---NSGTEACMGVLRLARAFTG 180 (476)
Q Consensus 116 ~~p~v~~a~~~~l~~~~~~~~~-------~~~~~----~la~~l~~~~~-~~e~v~~~---~sGseA~~~al~~ar~~~~ 180 (476)
.+|.+++++...+.+-...+.| .+... ...+.+++.+. ..+.+.++ +||++||..+++.. ...
T Consensus 46 ~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~lf~a~~~~~~~~~~~~sgt~an~~v~~al--~~~ 123 (452)
T PTZ00094 46 TSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALEAFGLDPEEWGVNVQPYSGSPANFAVYTAL--LQP 123 (452)
T ss_pred CCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHHHhCCCcccceeecCCCchHHHHHHHHHHh--cCC
Confidence 4688999988887652111111 11122 23456777775 34556566 79999999998842 233
Q ss_pred CceEEEEeCCCCCCchhHHhhcC-CCCccCCCCCCCCCCCCCCCceeeccCC-----CHHHHHHHHhcCCCCeEEEEEcc
Q 011856 181 RERIIKFEGCYHGHADPFLVKAG-SGVATLGLPDSPGVPKGATYETLTAPFN-----DVSALENLFENNKGEIAAIILEP 254 (476)
Q Consensus 181 ~~~ii~~~~~yhg~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~le~~l~~~~~~~a~vi~ep 254 (476)
++.|++ ...-||.......... ..+ ...+ ..-++..++++ |+++|++++++. +.+.|++.
T Consensus 124 gd~Ii~-~~~ehg~~l~~~~~l~~~~~------~~~~----~~~~~~~~~~~~~g~id~~~L~~~l~~~--~~~lvi~~- 189 (452)
T PTZ00094 124 HDRIMG-LDLPSGGHLTHGFYTAKKKV------SATS----IYFESLPYQVNEKGLIDYDKLEELAKAF--RPKLIIAG- 189 (452)
T ss_pred CCEEEe-cccccCCccccccccccccc------ccce----eeeeeeecccCCCCCcCHHHHHHHHHHh--CCCEEEEe-
Confidence 455555 4445654332211000 000 0000 00011222222 899999999753 23345542
Q ss_pred cCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccc-cCc-cccccchhhccCCCCchhh--hhhhcCCCCcEEEEEecHH
Q 011856 255 VVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM-TGF-RLAYGGAQEYFGVTPDLTT--LGKIIGGGLPVGAYGGRRD 330 (476)
Q Consensus 255 ~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~-~g~-r~g~~~~~~~~g~~pDi~t--~sK~lg~G~~iG~~~~~~~ 330 (476)
.++.|.+.| +++|.++|+++|+++++|++| .|. ..+ ..... .. ..|+++ ..|+|.|. ..|++.++++
T Consensus 190 -~s~~g~~~d----i~~I~~i~~~~ga~l~vDaaq~~G~i~~~-~~~~~-~~-~~D~l~~S~hK~l~GP-~Gg~l~~~~~ 260 (452)
T PTZ00094 190 -ASAYPRDID----YKRFREICDSVGAYLMADIAHTSGLVAAG-VLPSP-FP-YADVVTTTTHKSLRGP-RSGLIFYRKK 260 (452)
T ss_pred -CCCCCCccC----HHHHHHHHHHcCCEEEEeccchhccccCC-CCCCC-CC-CCcEEEcCCccCCCCC-CceEEEEecc
Confidence 345677888 999999999999999999999 444 221 11111 11 357775 55988753 2466666765
Q ss_pred HHHhhcCCCCccccCC--CCCcHHHHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHHHHHHhhhcCCceEeee-eceeE
Q 011856 331 IMEMVAPAGPMYQAGT--LSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAGHAICGGY-ISGMF 404 (476)
Q Consensus 331 i~~~l~~~~~~~~~~t--~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~-~g~~~ 404 (476)
+.+.+.+.-....+.. -+.++...++..++++.+.. +++.+++.++.++|.+.|.+.+. .+. ..+ .....
T Consensus 261 ~~~~l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~~g~--~v~--~~~~~~~~~ 336 (452)
T PTZ00094 261 VKPDIENKINEAVFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALEKRGY--DLV--TGGTDNHLV 336 (452)
T ss_pred cchHHHHhhccccCCCCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhCCc--EEe--cCCCCCceE
Confidence 5443321100001111 13466777778888988854 35778888899999988876421 111 111 11222
Q ss_pred EEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccC---------CCcceEEe------CCCcHHHHHHHHHHHHH
Q 011856 405 GFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPS---------QFEAGFTS------LAHSSDDIQHTITAAEK 469 (476)
Q Consensus 405 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~---------~~~~~~~~------~~~t~e~i~~~~~~l~~ 469 (476)
.+.+.... .....+...|.++||++... ..+.+|++ ..++++|++++++.|.+
T Consensus 337 ~v~~~~~~------------~~~~~~~~~L~~~gI~vs~~~~p~~~~~~~~~~vRis~~~~tt~g~~~~di~~l~~~l~~ 404 (452)
T PTZ00094 337 LVDLRPFG------------ITGSKMEKLLDAVNISVNKNTIPGDKSALNPSGVRLGTPALTTRGAKEKDFKFVADFLDR 404 (452)
T ss_pred eecCCcCC------------CCHHHHHHHHHHCCcEEecccCCCCCcCCCCCeEEECCHHHHhCCCCHHHHHHHHHHHHH
Confidence 33332111 11245666676789999532 12356774 23459999999999999
Q ss_pred HHHH
Q 011856 470 VKMR 473 (476)
Q Consensus 470 ~~~~ 473 (476)
++..
T Consensus 405 ~~~~ 408 (452)
T PTZ00094 405 AVKL 408 (452)
T ss_pred HHHH
Confidence 8863
No 293
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.67 E-value=1.1e-14 Score=146.35 Aligned_cols=239 Identities=20% Similarity=0.208 Sum_probs=152.4
Q ss_pred CCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCC
Q 011856 137 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPG 216 (476)
Q Consensus 137 ~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~ 216 (476)
+++...+|.+.++++. +.+..++++||++|+..+++.. ...+++|++....|++... .+... . + ..+
T Consensus 56 ~~pt~~~Le~~lA~l~-g~~~~l~~ssG~~Ai~~al~al--~~~Gd~Vl~~~~~Y~~t~~-~~~~~-l-------~-~~g 122 (425)
T PRK06084 56 MNPTNDVLEQRVAALE-GGVGALAVASGMAAITYAIQTI--AEAGDNIVSVAKLYGGTYN-LLAHT-L-------P-RIG 122 (425)
T ss_pred CCchHHHHHHHHHHHh-CCCceeEehhHHHHHHHHHHHH--hCCCCEEEEeCCCcchHHH-HHHHh-c-------c-cce
Confidence 4555678888888887 4567788999999999999842 2346788888888887432 22210 0 0 001
Q ss_pred CCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-Ccccc
Q 011856 217 VPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GFRLA 295 (476)
Q Consensus 217 ~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~r~g 295 (476)
..+..++.+|++++++.+++ ++++|++|++++++|.+.+ +++|.++|++||++||+||+|. ++.
T Consensus 123 ------i~v~~~d~~d~e~le~ai~~---~tklV~lesp~NPtG~v~d----l~~I~~la~~~~i~vVvD~a~a~~~~-- 187 (425)
T PRK06084 123 ------IETRFAAHDDIAALEALIDE---RTKAVFCESIGNPAGNIID----IQALADAAHRHGVPLIVDNTVATPVL-- 187 (425)
T ss_pred ------eEEEEECCCCHHHHHHHhcc---CCcEEEEeCCCCCCCeecC----HHHHHHHHHHcCCEEEEECCCccccc--
Confidence 12444566689999999974 5788999988888999998 9999999999999999999995 221
Q ss_pred ccchhhccCCCCchh--hhhhhcCC-CCcEEEEEec-HHH-HHhh-------cCCCCc----------------------
Q 011856 296 YGGAQEYFGVTPDLT--TLGKIIGG-GLPVGAYGGR-RDI-MEMV-------APAGPM---------------------- 341 (476)
Q Consensus 296 ~~~~~~~~g~~pDi~--t~sK~lg~-G~~iG~~~~~-~~i-~~~l-------~~~~~~---------------------- 341 (476)
........|++ +++|.+++ |.++|++++. +.+ .... ....+.
T Consensus 188 ----~~p~~~gaDivv~S~tK~l~G~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 263 (425)
T PRK06084 188 ----CRPFEHGADIVVHSLTKYIGGHGTSIGGIVVDSGKFPWAEHKERFALLNTPDPSYHGVTYTEAFGPAAFIGRCRVV 263 (425)
T ss_pred ----CChhhcCCCEEEECchhcccccccceeEEEEeCCccchhhccccccccccCCcccccchhhhhcchHHHHHHHHHH
Confidence 11122345765 78999985 6788877553 321 0110 000000
Q ss_pred -cccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhh----hcC-Cce---------Eeee-eceeEE
Q 011856 342 -YQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGK----KAG-HAI---------CGGY-ISGMFG 405 (476)
Q Consensus 342 -~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~----~~~-~~~---------~v~~-~g~~~~ 405 (476)
........+|..+..++..|+.+ +...++..++...+.+.|++... .+| ... ...+ .|.|+.
T Consensus 264 ~~~~~g~~l~~~~a~l~lrgl~tl--~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~~gg~~s 341 (425)
T PRK06084 264 PLRNMGAALSPFNAFLILQGLETL--ALRMERHTENALKVARYLQQHPQVAWVKYAGLPDHPEHELARRYMGGKPASILS 341 (425)
T ss_pred HHHhcCCCCCHHHHHHHHcCcCcH--HHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCcccHHHHHHhCCCCcceEEE
Confidence 00112245666666555554433 45667777778888888776421 111 100 1234 588999
Q ss_pred EEEe
Q 011856 406 FFFT 409 (476)
Q Consensus 406 i~~~ 409 (476)
|++.
T Consensus 342 ~~~~ 345 (425)
T PRK06084 342 FGIK 345 (425)
T ss_pred EEec
Confidence 9985
No 294
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.66 E-value=1.3e-14 Score=144.25 Aligned_cols=212 Identities=15% Similarity=0.113 Sum_probs=138.6
Q ss_pred CCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCC
Q 011856 137 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPG 216 (476)
Q Consensus 137 ~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~ 216 (476)
.++...+|.+.++++. +.+++++++||++|+..++.. ....++.|++....|++........... +
T Consensus 51 ~np~~~~lE~~lA~l~-g~~~~l~~~sG~~Ai~~~l~~--ll~~GD~Vlv~~~~y~~~~~~~~~~~~~-----------g 116 (385)
T PRK08574 51 ENPTLRPLEEALAKLE-GGVDALAFNSGMAAISTLFFS--LLKAGDRVVLPMEAYGTTLRLLKSLEKF-----------G 116 (385)
T ss_pred CCccHHHHHHHHHHHh-CCCcEEEeCCHHHHHHHHHHH--HhCCCCEEEEcCCCchhHHHHHHHhhcc-----------C
Confidence 4555677888888887 567888899999999999874 2445677888877776643322111111 1
Q ss_pred CCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccc-cCcccc
Q 011856 217 VPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM-TGFRLA 295 (476)
Q Consensus 217 ~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~-~g~r~g 295 (476)
+ ++..+. .|++++++.++++ ++++|++|.++|++|.+.+ +++|.++|+++|++||+|++| +++...
T Consensus 117 ~------~v~~~~-~d~~~l~~~i~~~--~tklV~ie~p~NPtG~v~d----l~~I~~la~~~gi~livD~t~a~~~~~~ 183 (385)
T PRK08574 117 V------KVVLAY-PSTEDIIEAIKEG--RTKLVFIETMTNPTLKVID----VPEVAKAAKELGAILVVDNTFATPLLYR 183 (385)
T ss_pred c------EEEEEC-CCHHHHHHhcCcc--CceEEEEECCCCCCCEecC----HHHHHHHHHHcCCEEEEECCCCccccCC
Confidence 1 122222 2688899888642 5788889988888999998 999999999999999999999 443110
Q ss_pred ccchhhccCCCCchh--hhhhhcCC-CCc-EEEEEe-cHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHH
Q 011856 296 YGGAQEYFGVTPDLT--TLGKIIGG-GLP-VGAYGG-RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTY 370 (476)
Q Consensus 296 ~~~~~~~~g~~pDi~--t~sK~lg~-G~~-iG~~~~-~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~ 370 (476)
. . ..| .|++ +++|.++| |-. .|++++ ++++.+.++... .......+|+.++.++..|+.+ +...
T Consensus 184 -~--l-~~G--aDivv~S~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~~---~~~g~~~~p~~a~l~l~~l~tL--~~R~ 252 (385)
T PRK08574 184 -P--L-RHG--ADFVVHSLTKYIAGHNDVVGGVAVAWSGEFLEELWEWR---RRLGTIMQPFEAYLVLRGLKTL--EVRF 252 (385)
T ss_pred -h--h-hhC--CcEEEeeCceeecCCCCceeEEEEECcHHHHHHHHHHH---HhcCCCCCHHHHHHHHcccCcH--HHHH
Confidence 0 1 123 3655 68899985 544 454544 677777665211 1112345677666666665543 3455
Q ss_pred HHHHHHHHHHHHHHHH
Q 011856 371 EYLNKITGELTQGIID 386 (476)
Q Consensus 371 ~~~~~~~~~l~~~L~~ 386 (476)
++..++..++.+.|++
T Consensus 253 ~~~~~na~~la~~L~~ 268 (385)
T PRK08574 253 ERQCRNAMAIAEFLSE 268 (385)
T ss_pred HHHHHHHHHHHHHHHc
Confidence 5666677777777664
No 295
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.66 E-value=1.7e-14 Score=143.69 Aligned_cols=238 Identities=16% Similarity=0.128 Sum_probs=151.1
Q ss_pred CCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCC
Q 011856 136 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 215 (476)
Q Consensus 136 ~~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~ 215 (476)
++++...+|.++++++. +.+..+.++||++|+..+++.. ...+++|++.++.|.+.......... ..
T Consensus 58 ~~~p~~~~Le~~lA~~~-g~~~~i~~~sG~~Ai~~~l~al--l~~Gd~Vl~~~~~y~~t~~~~~~~~~----------~~ 124 (388)
T PRK07811 58 TGNPTRTALEEQLAALE-GGAYGRAFSSGMAATDCLLRAV--LRPGDHIVIPNDAYGGTFRLIDKVFT----------RW 124 (388)
T ss_pred CCCccHHHHHHHHHHHh-CCCceEEeCCHHHHHHHHHHHH--hCCCCEEEEcCCCchHHHHHHHHhCc----------CC
Confidence 34556678888888887 4456677788999999999853 34567888888888654322211110 01
Q ss_pred CCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccc
Q 011856 216 GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLA 295 (476)
Q Consensus 216 ~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g 295 (476)
+ .++..++..|++++++.+++ ++++|++|.++|+.|.+.+ +++|.++|++||++||+||+|......
T Consensus 125 g------i~~~~~d~~d~e~l~~~i~~---~tklV~ie~p~NPtg~~~d----l~~I~~la~~~gi~lIvD~a~a~~~~~ 191 (388)
T PRK07811 125 G------VEYTPVDLSDLDAVRAAITP---RTKLIWVETPTNPLLSITD----IAALAELAHDAGAKVVVDNTFASPYLQ 191 (388)
T ss_pred C------eEEEEeCCCCHHHHHHhcCc---CCeEEEEECCCCCcceecC----HHHHHHHHHHcCCEEEEECCCCccccC
Confidence 1 12444555689999998864 5788888877777888877 999999999999999999999532111
Q ss_pred ccchhhccCCCCchh--hhhhhcCC-C-CcEEEEEec-HHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHH
Q 011856 296 YGGAQEYFGVTPDLT--TLGKIIGG-G-LPVGAYGGR-RDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTY 370 (476)
Q Consensus 296 ~~~~~~~~g~~pDi~--t~sK~lg~-G-~~iG~~~~~-~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~ 370 (476)
. ..+...|++ +++|.+++ | .+.|+++++ +++.+.+.. .........++..+..++..|+.+ +...
T Consensus 192 ~-----p~~~gaDivv~S~sK~l~g~~~~~gG~vv~~~~~l~~~~~~---~~~~~g~~~s~~~a~l~~~~L~tl--~~R~ 261 (388)
T PRK07811 192 Q-----PLALGADVVVHSTTKYIGGHSDVVGGALVTNDEELDEAFAF---LQNGAGAVPGPFDAYLTLRGLKTL--AVRM 261 (388)
T ss_pred C-----chhhCCcEEEecCceeecCCCCcEEEEEEECCHHHHHHHHH---HHHhcCCCCCHHHHHHHHhccCcH--HHHH
Confidence 1 112234655 68899985 3 567888764 666665541 111112234566555444444322 4455
Q ss_pred HHHHHHHHHHHHHHHHHhh----hcC-Cc---------eEeeeeceeEEEEEe
Q 011856 371 EYLNKITGELTQGIIDAGK----KAG-HA---------ICGGYISGMFGFFFT 409 (476)
Q Consensus 371 ~~~~~~~~~l~~~L~~~~~----~~~-~~---------~~v~~~g~~~~i~~~ 409 (476)
++..++...+.+.|++... .+| .. ....|.|.|+.|++.
T Consensus 262 ~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~ 314 (388)
T PRK07811 262 DRHSENAEAVAEFLAGHPEVSTVLYPGLPSHPGHEVAARQMRGFGGMVSVRLA 314 (388)
T ss_pred HHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhcCCCCceEEEEeC
Confidence 6666777777777765321 011 10 012467889999985
No 296
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.66 E-value=8.4e-15 Score=144.35 Aligned_cols=230 Identities=15% Similarity=0.125 Sum_probs=153.2
Q ss_pred CCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCC
Q 011856 136 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 215 (476)
Q Consensus 136 ~~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~ 215 (476)
+.++...+|.++++++. +.++++.++||++|+..++. .+..+++||+....|.+........... .
T Consensus 51 ~~~p~~~~le~~lA~le-g~~~~v~~~sG~aAi~~~l~---~l~~GD~VI~~~~~yg~~~~~~~~~~~~----------~ 116 (364)
T PRK07269 51 TKNPTRAKLEETLAAIE-SADYALATSSGMSAIVLAFS---VFPVGSKVVAVRDLYGGSFRWFNQQEKE----------G 116 (364)
T ss_pred CCCccHHHHHHHHHHHh-CCCeEEEeCCHHHHHHHHHH---HhCCCCEEEEecCCcCchHHHHHHHHhc----------C
Confidence 34556678888888887 67899999999999999986 3456788998888887654322111000 0
Q ss_pred CCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-Cccc
Q 011856 216 GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GFRL 294 (476)
Q Consensus 216 ~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~r~ 294 (476)
++ ...+ ..|++++++.++. ++++|++|.++|++|.+.+ +++|.++|+++|+++|+||++. ++.
T Consensus 117 ~~-------~~~~-~~d~~~l~~~i~~---~TklV~lesP~NPtg~~~d----i~~I~~la~~~gi~vvvD~t~~~~~~- 180 (364)
T PRK07269 117 RF-------HFTY-ANTEEELIAAIEE---DTDIVYIETPTNPLMVEFD----IEKVAKLAHAKGAKVIVDNTFYSPIY- 180 (364)
T ss_pred cE-------EEEe-cCCHHHHHHhcCc---CceEEEEECCCCCCCeeeC----HHHHHHHHHHcCCEEEEECCCccccc-
Confidence 10 0111 1278999998863 5788888888888888887 9999999999999999999973 221
Q ss_pred cccchhhccCCCCchh--hhhhhcCC-C-CcEEEEEe-cHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCH
Q 011856 295 AYGGAQEYFGVTPDLT--TLGKIIGG-G-LPVGAYGG-RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGT 369 (476)
Q Consensus 295 g~~~~~~~~g~~pDi~--t~sK~lg~-G-~~iG~~~~-~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~ 369 (476)
+...+...|++ +++|.++| | .-.|++++ ++++.+.++. .........+|+.+..++..|+.+ +..
T Consensus 181 -----~~pl~~gaDivv~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~---~~~~~G~~~s~~~a~l~~~~L~tL--~~r 250 (364)
T PRK07269 181 -----QRPIELGADIVLHSATKYLSGHNDVLAGVVVTNDLELYEKLFY---NLNTTGAVLSPFDSYLLMRGLKTL--SLR 250 (364)
T ss_pred -----CCchhhCCcEEEecCceeccCCCcccceEEEeCcHHHHHHHHH---HHHHhCCCCCHHHHHHHHcCCCcH--HHH
Confidence 12234446776 56799985 4 34667676 4667776642 111112356788877777666543 445
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCc--eEeeeeceeEEEEEe
Q 011856 370 YEYLNKITGELTQGIIDAGKKAGHA--ICGGYISGMFGFFFT 409 (476)
Q Consensus 370 ~~~~~~~~~~l~~~L~~~~~~~~~~--~~v~~~g~~~~i~~~ 409 (476)
+++.+++...+.+.|++ ++.+ ...++.|.++.|++.
T Consensus 251 ~~~~~~na~~~a~~L~~----~p~v~~v~ypg~gg~~sf~~~ 288 (364)
T PRK07269 251 MERSTANAQEVVAFLKK----SPAVKEVLYTGKGGMISFKVA 288 (364)
T ss_pred HHHHHHHHHHHHHHHHh----CCCccEEeCCCcCcEEEEEEC
Confidence 56666666666666654 4422 233678999999984
No 297
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.66 E-value=2.2e-14 Score=144.37 Aligned_cols=163 Identities=18% Similarity=0.153 Sum_probs=119.0
Q ss_pred CCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCC
Q 011856 136 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 215 (476)
Q Consensus 136 ~~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~ 215 (476)
++++...+|+++++++. +.+.+++++||++|+..++... ...+++||+.+..|++.......... ..
T Consensus 54 ~~~p~~~~le~~lA~l~-g~~~~v~~~sG~~Ai~~al~~l--~~~Gd~Vl~~~~~y~~t~~~~~~~~~----------~~ 120 (418)
T TIGR01326 54 LMNPTTDVLEQRIAALE-GGVAALAVASGQAAITYAILNL--AQAGDNIVSSSYLYGGTYNLFKHTLK----------RL 120 (418)
T ss_pred CCChhHHHHHHHHHHHh-CCCeEEEEccHHHHHHHHHHHH--hCCCCEEEEECCCcHHHHHHHHHHHH----------Hc
Confidence 45666788999999988 4578999999999999999843 34567888888888764332211100 00
Q ss_pred CCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccc
Q 011856 216 GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLA 295 (476)
Q Consensus 216 ~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g 295 (476)
+ .++..++.+|++++++.+++ ++++|++|.++|++|.+.+ +++|.++|++||+++|+||+|...
T Consensus 121 G------~~v~~v~~~d~~~l~~~l~~---~t~~V~le~p~NPtg~v~d----l~~I~~la~~~~i~livD~t~~~~--- 184 (418)
T TIGR01326 121 G------IEVRFVDPDDPEEFEKAIDE---NTKAVFAETIGNPAINVPD----IEAIAEVAHAHGVPLIVDNTFATP--- 184 (418)
T ss_pred C------cEEEEECCCCHHHHHHhcCc---CCeEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEECCCchh---
Confidence 1 12445556689999999864 5788889988888898888 999999999999999999999521
Q ss_pred ccchhhccCCCCchh--hhhhhcCC-CCcEEEEEecH
Q 011856 296 YGGAQEYFGVTPDLT--TLGKIIGG-GLPVGAYGGRR 329 (476)
Q Consensus 296 ~~~~~~~~g~~pDi~--t~sK~lg~-G~~iG~~~~~~ 329 (476)
.....+...+|++ +++|.+++ |+++|++++++
T Consensus 185 --~~~~~l~~g~Divv~S~sK~l~g~G~~lGg~v~~~ 219 (418)
T TIGR01326 185 --YLCRPIDHGADIVVHSATKYIGGHGTAIGGVIVDG 219 (418)
T ss_pred --hcCCchhcCCeEEEECccccccCCccceEEEEEec
Confidence 1111223346766 78999996 89999997754
No 298
>PRK02769 histidine decarboxylase; Provisional
Probab=99.66 E-value=1.4e-13 Score=135.97 Aligned_cols=289 Identities=16% Similarity=0.090 Sum_probs=178.4
Q ss_pred CHHHHHHHHHHHhhCC-CCCe--EEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCC
Q 011856 138 CLLENVLAEMVISAVP-SIEM--VRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDS 214 (476)
Q Consensus 138 ~~~~~~la~~l~~~~~-~~e~--v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~ 214 (476)
.+.+.+..+++++++. ..++ .+||+||||+|..++..+|.+.+++. |+....-|.+...++...+.+...++...
T Consensus 64 ~~~e~~~~~~~a~l~g~~~~~~~G~~TsGgTean~~a~~~ar~~~~~~~-ii~s~~~H~Sv~ka~~~lg~~~~~V~~~~- 141 (380)
T PRK02769 64 FDFERDVMNFFAELFKIPFNESWGYITNGGTEGNLYGCYLARELFPDGT-LYYSKDTHYSVSKIARLLRIKSRVITSLP- 141 (380)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCEEEecChHHHHHHHHHHHHHhCCCcE-EEeCCCceehHHHHHHHcCCCCceeccCC-
Confidence 3567788888888885 2233 58999999999999998876544444 44445556656555554454332211110
Q ss_pred CCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhC---CEEEEeccccC
Q 011856 215 PGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENG---ALLIFDEVMTG 291 (476)
Q Consensus 215 ~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g---~llI~DEv~~g 291 (476)
.+ .-|+++|++.+++.+..+.+|++...+++.|.+.| +++|.++|++|| +++++|-+|.|
T Consensus 142 ~g-------------~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~idp----i~~I~~i~~~~g~~~~~lHVDaA~gg 204 (380)
T PRK02769 142 NG-------------EIDYDDLISKIKENKNQPPIIFANIGTTMTGAIDN----IKEIQEILKKIGIDDYYIHADAALSG 204 (380)
T ss_pred CC-------------cCcHHHHHHHHHhCCCCcEEEEEEeCCCCCcccCC----HHHHHHHHHHhCCCceEEEEEecccc
Confidence 11 01899999999865445788888888888999999 999999999998 69999999987
Q ss_pred c-cccccchhhccCC--CCchhhhh--hhcCCCCcEEEEEecHHHHHhhcCCCCccc--cCCCCC--cHHHHHHHHHHHH
Q 011856 292 F-RLAYGGAQEYFGV--TPDLTTLG--KIIGGGLPVGAYGGRRDIMEMVAPAGPMYQ--AGTLSG--NPLAMTAGIHTLK 362 (476)
Q Consensus 292 ~-r~g~~~~~~~~g~--~pDi~t~s--K~lg~G~~iG~~~~~~~i~~~l~~~~~~~~--~~t~~~--~~~~~aaa~aal~ 362 (476)
+ -.-.... ..+++ ..|.+++| |.+++-.++|.++.+++..+.+.....+.. ..|+.+ |....++..++|+
T Consensus 205 ~~~p~~~~~-~~~d~~~~vDsis~s~HK~~~~P~g~G~l~~r~~~~~~~~~~~~yl~~~d~t~~GSR~g~~~l~lw~aL~ 283 (380)
T PRK02769 205 MILPFVNNP-PPFSFADGIDSIAISGHKFIGSPMPCGIVLAKKKYVERISVDVDYIGSRDQTISGSRNGHTALLLWAAIR 283 (380)
T ss_pred eeecccCcc-ccCCccCCCCEEEECCcccCCCCCCcEEEEEehhhhhhcccCccccCCCCCCccCCCCcHHHHHHHHHHH
Confidence 5 2100000 01111 45777665 877656789999998887766542111100 012222 3345556666777
Q ss_pred HhcC---CCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCe
Q 011856 363 RLKE---PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGV 439 (476)
Q Consensus 363 ~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv 439 (476)
.+.. .+..++..++.+++.++|++. ++..-.... ...+.|.. |+ ..+ .+|.
T Consensus 284 ~lg~~G~~~~~~~~~~la~~l~~~L~~~----g~~~~~~p~--~~~v~f~~-----------~~----~~~-----~~~w 337 (380)
T PRK02769 284 SLGSKGLRQRVQHCLDMAQYAVDRLQAN----GIPAWRNPN--SITVVFPC-----------PS----ERI-----WKKW 337 (380)
T ss_pred HHCHHHHHHHHHHHHHHHHHHHHHHHhC----CCEEEcCCC--ceEEEEcC-----------CC----HHH-----HhCe
Confidence 6654 556677788888888888663 222111111 22233322 11 111 1555
Q ss_pred EeccCCC-cceEEeCCCcHHHHHHHHHHHHHHHH
Q 011856 440 YFAPSQF-EAGFTSLAHSSDDIQHTITAAEKVKM 472 (476)
Q Consensus 440 ~~~~~~~-~~~~~~~~~t~e~i~~~~~~l~~~~~ 472 (476)
.+.+... -++.+...++++.+|++++-|.+.+.
T Consensus 338 ~l~~~~~~~hi~~~~~~~~~~~~~f~~dl~~~~~ 371 (380)
T PRK02769 338 HLATSGNQAHIITMPHHNKQQIDSLIDELIFDLK 371 (380)
T ss_pred eEcccCCEEEEEECCCCCHHHHHHHHHHHHHHHh
Confidence 5554432 12344567799999999999987764
No 299
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.65 E-value=7.6e-14 Score=139.03 Aligned_cols=310 Identities=16% Similarity=0.102 Sum_probs=183.0
Q ss_pred HHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchh
Q 011856 118 DQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADP 197 (476)
Q Consensus 118 p~v~~a~~~~l~~~~~~~~~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~ 197 (476)
++-.+++.+.+..+..+ +.+...+|.+.+++++ +.+.+++++||++|+..+++.. ....+++||+...+|.+.. .
T Consensus 14 ~~e~~~~~~~l~~~~~~--~g~~~~~le~~la~~~-g~~~~v~~~sgt~al~lal~al-~~~~Gd~Viv~~~~~~~~~-~ 88 (379)
T PRK11658 14 DEELAAVKEVLRSGWIT--TGPKNQALEQAFCQLT-GNQHAIAVSSATAGMHITLMAL-GIGPGDEVITPSLTWVSTL-N 88 (379)
T ss_pred HHHHHHHHHHHHcCCcc--CCHhHHHHHHHHHHHh-CCCeEEEECCHHHHHHHHHHHc-CCCCCCEEEECCCcHHHHH-H
Confidence 55677888888765432 3445678888888877 5678999999999999999842 1345678888888877653 3
Q ss_pred HHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHH
Q 011856 198 FLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITK 277 (476)
Q Consensus 198 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~ 277 (476)
.+...|..+...+...... .-|++++++.++. ++++|+ |++ ..|...+ +++|.++|+
T Consensus 89 ~~~~~G~~~v~vd~~~~~~-------------~~d~~~l~~~i~~---~tkav~--~~~-~~G~~~d----~~~i~~~a~ 145 (379)
T PRK11658 89 MIVLLGATPVMVDVDRDTL-------------MVTPEAIEAAITP---RTKAII--PVH-YAGAPAD----LDAIRAIGE 145 (379)
T ss_pred HHHHcCCEEEEEecCCCcC-------------CcCHHHHHHhccc---CCeEEE--EeC-CCCCcCC----HHHHHHHHH
Confidence 3334444332221110000 0178999998863 466666 332 2566666 899999999
Q ss_pred HhCCEEEEecccc-Cc-cccccchhhccCCCCchhhhh--hhcCCCCcEEEEEec-HHHHHhhcC---CCCc--------
Q 011856 278 ENGALLIFDEVMT-GF-RLAYGGAQEYFGVTPDLTTLG--KIIGGGLPVGAYGGR-RDIMEMVAP---AGPM-------- 341 (476)
Q Consensus 278 ~~g~llI~DEv~~-g~-r~g~~~~~~~~g~~pDi~t~s--K~lg~G~~iG~~~~~-~~i~~~l~~---~~~~-------- 341 (476)
+||++||+|++|+ |. ..|.. ...+|. ++.+|+ |.+.+| +.|+++.+ +++.+.++. .+..
T Consensus 146 ~~gi~vi~D~a~a~g~~~~~~~--~g~~g~--~~~Sf~~~K~l~~g-~GG~v~~~~~~~~~~~~~~~~~G~~~~~~~~~~ 220 (379)
T PRK11658 146 RYGIPVIEDAAHAVGTYYKGRH--IGARGT--AIFSFHAIKNITCA-EGGLVVTDDDELADRLRSLKFHGLGVDAFDRQT 220 (379)
T ss_pred HcCCeEEEECCCccCCeECCee--cCCCCC--EEEeCCCCCcCccc-CceEEEECCHHHHHHHHHHHHcCCCcchhhhhc
Confidence 9999999999995 54 33321 112333 566665 667543 67777764 777665542 1100
Q ss_pred ----------cccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhh-cCCceEe-eeeceeEEEEEe
Q 011856 342 ----------YQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKK-AGHAICG-GYISGMFGFFFT 409 (476)
Q Consensus 342 ----------~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~-~~~~~~v-~~~g~~~~i~~~ 409 (476)
..+..+..+.+.++.++..++.+ ++..++.+++.+++.+.|.++... ...+... .....++.+.+.
T Consensus 221 ~~~~~~~~~~~~G~n~~~~~l~AAl~~~ql~~l--~~~~~~r~~~a~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (379)
T PRK11658 221 QGRAPQAEVLTPGYKYNLADINAAIALVQLAKL--EALNARRREIAARYLQALADLPFQPLSLPAWPHQHAWHLFIIRVD 298 (379)
T ss_pred ccCCCcceeeccccccCcCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhcCCCCccCcCCCCCCceeEEEEEEEEC
Confidence 00112334455556666655544 456677777777787877654211 1011000 011122233332
Q ss_pred cCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCC-----------------C--------cceEEe--CCCcHHHHHH
Q 011856 410 EGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ-----------------F--------EAGFTS--LAHSSDDIQH 462 (476)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~-----------------~--------~~~~~~--~~~t~e~i~~ 462 (476)
... ......++.+.|.++||.+.... . ..+.++ ...|++|++.
T Consensus 299 ~~~----------~~~~r~~~~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lP~~~~l~~~~~~~ 368 (379)
T PRK11658 299 EER----------CGISRDALMEALKERGIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICSLPLFPDMTDADVDR 368 (379)
T ss_pred Ccc----------ccCCHHHHHHHHHHCCCCCcccCcCcccChhhhccCCCCCChHHHHHHhCeEEccCCCCCCHHHHHH
Confidence 110 01123678888999998654211 0 012333 4578999999
Q ss_pred HHHHHHHHHH
Q 011856 463 TITAAEKVKM 472 (476)
Q Consensus 463 ~~~~l~~~~~ 472 (476)
+++.|++++.
T Consensus 369 i~~~i~~~~~ 378 (379)
T PRK11658 369 VITALQQIAG 378 (379)
T ss_pred HHHHHHHHHh
Confidence 9999998753
No 300
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.65 E-value=8.6e-14 Score=140.42 Aligned_cols=305 Identities=16% Similarity=0.122 Sum_probs=180.1
Q ss_pred HHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHH-------hccCCceEEEEeCCCCC
Q 011856 121 LAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLAR-------AFTGRERIIKFEGCYHG 193 (476)
Q Consensus 121 ~~a~~~~l~~~~~~~~~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar-------~~~~~~~ii~~~~~yhg 193 (476)
.+++.+.+..+.... .....+|.+.+++++ +.+++++++||++|+..++..+. ....++.||+...+|.+
T Consensus 47 ~~a~~~~~~~~~~~~--G~~~~~fe~~lA~~~-g~~~~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a 123 (438)
T PRK15407 47 LQNLVDASLDFWLTT--GRFNDAFEKKLAEFL-GVRYALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPT 123 (438)
T ss_pred HHHHHHHHHhCcccC--ChhHHHHHHHHHHHh-CCCeEEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHH
Confidence 344555555543222 233556777777776 56789999999999999998542 23456788888888876
Q ss_pred CchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCC-CHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHH
Q 011856 194 HADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFN-DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAI 272 (476)
Q Consensus 194 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l 272 (476)
..... ...|..+...+... -.++ |++++++.+.. ++++|++++..++ ..+ +++|
T Consensus 124 ~~~~v-~~~G~~pv~vdvd~--------------~~~~id~~~le~~i~~---~tkaVi~~~~~G~---p~d----l~~I 178 (438)
T PRK15407 124 TVNPI-IQNGLVPVFVDVEL--------------PTYNIDASLLEAAVSP---KTKAIMIAHTLGN---PFD----LAAV 178 (438)
T ss_pred HHHHH-HHcCCEEEEEecCC--------------CcCCcCHHHHHHHcCc---CCeEEEEeCCCCC---hhh----HHHH
Confidence 54333 33343222111100 0111 78999998863 6788888876443 333 8999
Q ss_pred HHHHHHhCCEEEEecccc-Cc-cccccchhhccCCCCchhhhh----hhcCCCCcEEEEEecHH-HHHhhc---CCCCc-
Q 011856 273 RRITKENGALLIFDEVMT-GF-RLAYGGAQEYFGVTPDLTTLG----KIIGGGLPVGAYGGRRD-IMEMVA---PAGPM- 341 (476)
Q Consensus 273 ~~l~~~~g~llI~DEv~~-g~-r~g~~~~~~~~g~~pDi~t~s----K~lg~G~~iG~~~~~~~-i~~~l~---~~~~~- 341 (476)
+++|++||++||+|++|+ |- ..|. ..|-.-|+.+|| |.+..| ..|+++.+++ +.+.++ ..+..
T Consensus 179 ~~la~~~gi~vIeDaa~a~G~~~~g~-----~~G~~gd~~~fSf~~~k~~~~g-eGG~l~t~d~~l~~~~~~~~~~G~~~ 252 (438)
T PRK15407 179 KAFCDKHNLWLIEDNCDALGSTYDGR-----MTGTFGDIATLSFYPAHHITMG-EGGAVFTNDPLLKKIIESFRDWGRDC 252 (438)
T ss_pred HHHHHHCCCEEEEECccchhhhcCCe-----eeeccCceEEEeCCCCCCcccc-CceEEEECCHHHHHHHHHHHHhCccc
Confidence 999999999999999995 32 2221 112223666554 777744 3588877644 443322 11100
Q ss_pred --------------------------------cccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhh
Q 011856 342 --------------------------------YQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGK 389 (476)
Q Consensus 342 --------------------------------~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 389 (476)
..+..+..+.+.++.++..|+.+ ++..++-+++.+++.+.|.++..
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~rmsel~AAig~~qL~~l--~~~~~~R~~~a~~y~~~L~~~~~ 330 (438)
T PRK15407 253 WCAPGCDNTCGKRFGWQLGELPFGYDHKYTYSHLGYNLKITDMQAAIGLAQLEKL--PGFIEARKANFAYLKEGLASLED 330 (438)
T ss_pred ccccccccccccccccccccccccccccccccccccccCccHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhccCCC
Confidence 01233456778888888888766 45777777888888888865321
Q ss_pred hcCCce---EeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCC--------------c-----
Q 011856 390 KAGHAI---CGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF--------------E----- 447 (476)
Q Consensus 390 ~~~~~~---~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~--------------~----- 447 (476)
....+. .....-.++.+.+.... .....++.+.|.++||-.+.... .
T Consensus 331 ~~~~~~~~~~~~~~~~~~~i~~~~~~-----------~~~Rd~l~~~L~~~GI~~~~~~~~~~~~~p~~~~~~~~~~~~~ 399 (438)
T PRK15407 331 FLILPEATPNSDPSWFGFPITVKEDA-----------GFTRVELVKYLEENKIGTRLLFAGNLTRQPYFKGVKYRVVGEL 399 (438)
T ss_pred ccccCcCCCCCeeEEEEEEEEECCcC-----------CCCHHHHHHHHHHCCCCccccCCCccccChhhhhcCCCCCCCC
Confidence 011111 11111112333332110 01136788999999986542110 0
Q ss_pred ---------ceEEe--CCCcHHHHHHHHHHHHHHHH
Q 011856 448 ---------AGFTS--LAHSSDDIQHTITAAEKVKM 472 (476)
Q Consensus 448 ---------~~~~~--~~~t~e~i~~~~~~l~~~~~ 472 (476)
.+.++ ...|++|++.++++|++++.
T Consensus 400 P~ae~~~~~~l~LP~~~~l~~~~v~~i~~~i~~~~~ 435 (438)
T PRK15407 400 TNTDRIMNDTFWIGVYPGLTEEMLDYVIEKIEEFFG 435 (438)
T ss_pred hHHHHHHhCeEEecCCCCCCHHHHHHHHHHHHHHHh
Confidence 02333 34589999999999999875
No 301
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.63 E-value=1.2e-13 Score=137.74 Aligned_cols=298 Identities=11% Similarity=-0.000 Sum_probs=177.9
Q ss_pred CHHHHHHHHHHHhhCCC--CCeEEEeCCHH-HHHHHHHHHHHhcc-CCceEEEEeCCCCCCchhHHhhcCCCCccCCC-C
Q 011856 138 CLLENVLAEMVISAVPS--IEMVRFVNSGT-EACMGVLRLARAFT-GRERIIKFEGCYHGHADPFLVKAGSGVATLGL-P 212 (476)
Q Consensus 138 ~~~~~~la~~l~~~~~~--~e~v~~~~sGs-eA~~~al~~ar~~~-~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~-~ 212 (476)
..+..++.+.++++++- .+.++++++|| .++..++..++... +.+.||+.... |-....++...|..+...+. .
T Consensus 104 ~~l~~~~e~~~~~~~G~~~~~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~t-h~S~~kAi~~~G~~pv~Vd~~~ 182 (444)
T TIGR03531 104 YKLTNKLVKDFLKLLGLRSIKSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRID-QKSCIKAISTAGFEPRVIETVL 182 (444)
T ss_pred HHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcC-hHHHHHHHHHcCCeEEEeeeee
Confidence 34556777777777742 24799999999 68888888655332 34566666555 66677777777765443221 0
Q ss_pred CCCCCCCCCCCceeeccCC-CHHHHHHHHhcCC-CCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc
Q 011856 213 DSPGVPKGATYETLTAPFN-DVSALENLFENNK-GEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT 290 (476)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~-d~~~le~~l~~~~-~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~ 290 (476)
.... ++ |+++|++.|++.. +.+.+|+..|.....|...+ +++|.++|++||+++|+|++|.
T Consensus 183 d~~~-------------~~iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~dd----L~eIa~la~k~gI~lIvDaAyg 245 (444)
T TIGR03531 183 DGDE-------------LTTDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPDD----IEEIAKICANYDIPHIVNNAYG 245 (444)
T ss_pred cCcC-------------CCcCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchhC----HHHHHHHHHHcCCEEEEECcCc
Confidence 0000 11 8999999998543 45666666666444445555 9999999999999999999996
Q ss_pred Cc--cccccchhhccCC-CCchhh--hhhhcCC-CCcEEEEEe-cHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHH
Q 011856 291 GF--RLAYGGAQEYFGV-TPDLTT--LGKIIGG-GLPVGAYGG-RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKR 363 (476)
Q Consensus 291 g~--r~g~~~~~~~~g~-~pDi~t--~sK~lg~-G~~iG~~~~-~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~ 363 (476)
.. ..... ....+.. ..|+++ ++|.+.. |. .|.++. ++++++.+.. .+.+ .. .+..++.+....+..
T Consensus 246 ~~~~~~~~~-~~~g~~~Grad~vv~s~hK~l~~pg~-Gg~I~~~d~el~~~i~~---~y~g-~~-~~s~~~~~~~~ll~~ 318 (444)
T TIGR03531 246 LQSNKYMEL-INKAIKVGRVDAVVSSTDKNFMVPVG-GAIIYSFDENFIQEISK---SYPG-RA-SASPSLDVLITLLSL 318 (444)
T ss_pred CcChhhhhh-hhccccccCCCeEEEeCccCCCCCCC-EEEEEECCHHHHHHHHH---hccC-CC-CChHHHHHHHHHHHh
Confidence 32 11110 0011111 246554 6798874 44 455556 6778887763 2222 21 223455555555543
Q ss_pred hcC--CCHHHHHHHHHHHHHHHHHHHhhhcCCc-eEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeE
Q 011856 364 LKE--PGTYEYLNKITGELTQGIIDAGKKAGHA-ICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVY 440 (476)
Q Consensus 364 ~~~--~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~ 440 (476)
-.+ +++.++..++.+++.+.|+++..+++.. .+++....-+++.+..-. ......+...|..++|-
T Consensus 319 G~~g~~~li~~~~~~a~~l~~~L~~l~~~~~~~~~~~~~n~is~~~~~~~~~-----------~~~~~~~g~~l~~~~v~ 387 (444)
T TIGR03531 319 GSKGYLELLKERKEMYKYLKELLQKLAERHGERLLDTPENPISSAMTLSTLK-----------GKDPTMLGSMLYSRRVT 387 (444)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcEeecCCCCceeEEEeccccc-----------ccCHHHHHHHHHhCCCC
Confidence 322 6778888899999999999988777632 223233333344442110 11124566666666551
Q ss_pred ----eccCC-----------C--c-------ceEE--eCCCcHHHHHHHHHHHHHHH
Q 011856 441 ----FAPSQ-----------F--E-------AGFT--SLAHSSDDIQHTITAAEKVK 471 (476)
Q Consensus 441 ----~~~~~-----------~--~-------~~~~--~~~~t~e~i~~~~~~l~~~~ 471 (476)
+.++. + + ++.. .+.++++|+|.++++|++++
T Consensus 388 g~r~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~g~~~~~~~~~~~~l~~~~ 444 (444)
T TIGR03531 388 GPRVVTNGDSKTVGGCEFKGYGSHTSNYPCPYITAAAAIGMTKEDVDTFVSRLEKSL 444 (444)
T ss_pred CceeecCCCceEECCEEeecccccccCCCchhHHHHHHhCCcHHHHHHHHHHHhhcC
Confidence 22221 0 0 1111 35779999999999999863
No 302
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.63 E-value=6.1e-14 Score=138.98 Aligned_cols=304 Identities=18% Similarity=0.187 Sum_probs=181.2
Q ss_pred HHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchh
Q 011856 118 DQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADP 197 (476)
Q Consensus 118 p~v~~a~~~~l~~~~~~~~~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~ 197 (476)
.+..+++.+.++.+. ++.......++.+.+++++ +.++++.++||+.|++.|++.. ...++++||+..-+|.+.. .
T Consensus 5 ~e~~~~v~~~l~s~~-~~~~g~~~~~fE~~~a~~~-g~~~~~~~~sgt~Al~~al~~l-~~~~gdeVi~p~~t~~~~~-~ 80 (363)
T PF01041_consen 5 EEEIDAVLEVLRSGW-LSTYGPYVEEFEKEFAEYF-GVKYAVAVSSGTSALHLALRAL-GLGPGDEVIVPAYTFPATA-S 80 (363)
T ss_dssp HHHHHHHHHHHHHTC-CSSSSHHHHHHHHHHHHHH-TSSEEEEESSHHHHHHHHHHHT-TGGTTSEEEEESSS-THHH-H
T ss_pred HHHHHHHHHHHHhCC-ccCCCHHHHHHHHHHHHHh-CCCeEEEeCChhHHHHHHHHhc-CCCcCceEecCCCcchHHH-H
Confidence 466778888888763 3222566677777777777 7899999999999999999953 4557788998877776643 3
Q ss_pred HHhhcCCCCccCCC-CCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHH
Q 011856 198 FLVKAGSGVATLGL-PDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRIT 276 (476)
Q Consensus 198 ~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~ 276 (476)
++...|..+...++ |....+ |++++++.++. ++++|++-+..|. ..+ +++|.++|
T Consensus 81 ai~~~G~~pv~~Di~~~~~~i--------------d~~~~~~~i~~---~t~ai~~~h~~G~---~~d----~~~i~~~~ 136 (363)
T PF01041_consen 81 AILWAGAEPVFVDIDPETLNI--------------DPEALEKAITP---KTKAILVVHLFGN---PAD----MDAIRAIA 136 (363)
T ss_dssp HHHHTT-EEEEE-BETTTSSB---------------HHHHHHHHHT---TEEEEEEE-GGGB----------HHHHHHHH
T ss_pred HHHHhccEEEEEeccCCcCCc--------------CHHHHHHHhcc---CccEEEEecCCCC---ccc----HHHHHHHH
Confidence 33444443322222 222222 89999999985 6788888887753 344 99999999
Q ss_pred HHhCCEEEEecccc-Cc-cccccchhhccCCCCchhhhh----hhcCCCCcEEEEEec-HHHHHhhc---CCCC------
Q 011856 277 KENGALLIFDEVMT-GF-RLAYGGAQEYFGVTPDLTTLG----KIIGGGLPVGAYGGR-RDIMEMVA---PAGP------ 340 (476)
Q Consensus 277 ~~~g~llI~DEv~~-g~-r~g~~~~~~~~g~~pDi~t~s----K~lg~G~~iG~~~~~-~~i~~~l~---~~~~------ 340 (476)
++||++||.|-+|+ |- ..| ...|-.-|+.+|| |.+.+| -.|+++.+ +++.+.++ ..+.
T Consensus 137 ~~~~i~lIeD~a~a~g~~~~g-----~~~G~~gd~~~fSf~~~K~i~~g-eGG~v~~~~~~~~~~~~~~~~~g~~~~~~~ 210 (363)
T PF01041_consen 137 RKHGIPLIEDAAQAFGARYKG-----RPVGSFGDIAIFSFHPTKIITTG-EGGAVVTNDPELAERARALRNHGRSRDAFR 210 (363)
T ss_dssp HHTT-EEEEE-TTTTT-EETT-----EETTSSSSEEEEESSTTSSS-SS-S-EEEEESTHHHHHHHHHHTBTTEETSECS
T ss_pred HHcCCcEEEccccccCceeCC-----EeccCCCCceEecCCCCCCCcCC-CCeeEEecHHHHHHHhhhhhccCcCccccc
Confidence 99999999999995 22 222 1223333776655 988744 35777775 45554443 2211
Q ss_pred cc-----ccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhh--cCCceEee-eeceeEEEEEecCC
Q 011856 341 MY-----QAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKK--AGHAICGG-YISGMFGFFFTEGP 412 (476)
Q Consensus 341 ~~-----~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~--~~~~~~v~-~~g~~~~i~~~~~~ 412 (476)
.+ .+..+..+.+.++.+++.|+.+ ++..++-+++.+++.+.|.....- .+.+.... .....+.+.+.+..
T Consensus 211 ~~~~~~~~g~n~rm~~~~AAigl~QL~~L--~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~ 288 (363)
T PF01041_consen 211 RYRHELPPGYNFRMSELQAAIGLAQLKRL--DEIIARRRENAQRYREALAGIPGIKPPPIPDGAERSSYYRFPIRLPDEA 288 (363)
T ss_dssp TTEESSSS--B-B-BHHHHHHHHHHHHTH--HHHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTEEBCESSEEEEETCCG
T ss_pred cccccccCCcccccHHHHHHHHHHHHHHh--hhhHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccccccccc
Confidence 11 1234566788888888877755 456666667777777777665211 01111111 11222333332210
Q ss_pred CcCchhhcccchHHHHHHHHHHHHCCeEeccCCC-c-----c----------------------eEEe--CCCcHHHHHH
Q 011856 413 VYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-E-----A----------------------GFTS--LAHSSDDIQH 462 (476)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~-~-----~----------------------~~~~--~~~t~e~i~~ 462 (476)
....+++.+.|.++||.+.+... + . +.++ ...+++|++.
T Consensus 289 -----------~~~rd~l~~~L~~~GI~~~~~~~~pl~~~~~~~~~~~~~~~~~P~ae~l~~r~l~LP~~~~lt~edv~~ 357 (363)
T PF01041_consen 289 -----------LADRDELVEALRARGIETRPHYPKPLHRQPVYRSYPYYAPGDLPNAERLSQRLLSLPIHPRLTEEDVDY 357 (363)
T ss_dssp -----------CSTHHHHHHHHHHTTBEEBCSTSSCGGGSGGGTTGEEEETSSSHHHHHHHHHEEEEEHSTTSCHHHHHH
T ss_pred -----------cchHHHHHHHHHHCCCcccccccCchhhhHHHHhcCccccCCCHHHHHHHhCeEECcCCCCCCHHHHHH
Confidence 01246889999999998876531 0 0 1332 5678999999
Q ss_pred HHHHHH
Q 011856 463 TITAAE 468 (476)
Q Consensus 463 ~~~~l~ 468 (476)
++++|+
T Consensus 358 I~~~ir 363 (363)
T PF01041_consen 358 IAEAIR 363 (363)
T ss_dssp HHHHHH
T ss_pred HhhccC
Confidence 998874
No 303
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.63 E-value=3e-14 Score=143.47 Aligned_cols=238 Identities=18% Similarity=0.187 Sum_probs=152.3
Q ss_pred CCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCC
Q 011856 137 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPG 216 (476)
Q Consensus 137 ~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~ 216 (476)
.++...+|.+.++++. +.+..++++||+.|+..+++.. ...+++||+....|++.......... ..+
T Consensus 61 ~~p~~~~le~~lA~l~-g~~~al~~~SG~~Ai~~al~al--l~pGd~VIv~~~~y~~t~~~~~~~~~----------~~G 127 (427)
T PRK05994 61 TNPTNAVLEERVAALE-GGTAALAVASGHAAQFLVFHTL--LQPGDEFIAARKLYGGSINQFGHAFK----------SFG 127 (427)
T ss_pred CCccHHHHHHHHHHHh-CCCcEEEEcCHHHHHHHHHHHH--hCCCCEEEEecCcchhHHHHHHHHHH----------hcC
Confidence 3455678888888888 4566899999999999999853 44668888888888875322111000 001
Q ss_pred CCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-Ccccc
Q 011856 217 VPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GFRLA 295 (476)
Q Consensus 217 ~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~r~g 295 (476)
..+..++.+|++++++.++. ++++|++|.++|++|.+.+ +++|.++|++||+++|+|++|. ++
T Consensus 128 ------~~v~~vd~~d~~~l~~ai~~---~tklV~vesp~NptG~v~d----l~~I~~la~~~gi~livD~a~a~~~--- 191 (427)
T PRK05994 128 ------WQVRWADADDPASFERAITP---RTKAIFIESIANPGGTVTD----IAAIAEVAHRAGLPLIVDNTLASPY--- 191 (427)
T ss_pred ------cEEEEECCCCHHHHHHhcCc---CCeEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEECCccccc---
Confidence 12445555689999998863 6889999998888999998 9999999999999999999995 22
Q ss_pred ccchhhccCCCCchh--hhhhhcCC-CCcEEEEEec-HH-----------------------HHHhhc-------CC-CC
Q 011856 296 YGGAQEYFGVTPDLT--TLGKIIGG-GLPVGAYGGR-RD-----------------------IMEMVA-------PA-GP 340 (476)
Q Consensus 296 ~~~~~~~~g~~pDi~--t~sK~lg~-G~~iG~~~~~-~~-----------------------i~~~l~-------~~-~~ 340 (476)
....+...+|++ +++|.+++ |-.+|+++.. .. +.+.+. .. ..
T Consensus 192 ---~~~pl~~gaDivv~S~tK~lgg~~~~~gG~v~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (427)
T PRK05994 192 ---LIRPIEHGADIVVHSLTKFLGGHGNSMGGIIVDGGTFDWSKSGKYPMLSEPRPEYHGLVLHETFGNFAFAIAARVLG 268 (427)
T ss_pred ---cCCccccCCcEEEEcCccccCCCCCcEEEEEEeCCccccccccccccccCCcchhhhhhHHHHhhhhhhHHHHHHHH
Confidence 122334557876 58899985 4456666442 21 111100 00 00
Q ss_pred ccccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhh----hcC-Cce---------E-eeeeceeEE
Q 011856 341 MYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGK----KAG-HAI---------C-GGYISGMFG 405 (476)
Q Consensus 341 ~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~----~~~-~~~---------~-v~~~g~~~~ 405 (476)
....+ ...+|..++.++..|+.+ +...++..++...+.+.|++... .+| ... . ..+.|.|+.
T Consensus 269 ~~~~G-~~~~~~~A~l~~~~l~tL--~~r~~~~~~~a~~la~~L~~~p~v~~v~yP~l~~~~~~~~~~~~~~~g~g~~~s 345 (427)
T PRK05994 269 LRDLG-PAISPFNAFLILTGIETL--PLRMQRHSDNALAVAEWLKGHPKVSWVNYAGLPDDPYHALAQKYSPKGAGAVFT 345 (427)
T ss_pred HHhcC-CCCCHHHHHHHHcCcccH--HHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhcCCCceEEEE
Confidence 00111 135666666665555433 45667777778888887765421 111 000 1 246788999
Q ss_pred EEEe
Q 011856 406 FFFT 409 (476)
Q Consensus 406 i~~~ 409 (476)
|++.
T Consensus 346 f~l~ 349 (427)
T PRK05994 346 FGLK 349 (427)
T ss_pred EEec
Confidence 9985
No 304
>PLN02509 cystathionine beta-lyase
Probab=99.63 E-value=6.1e-14 Score=141.34 Aligned_cols=230 Identities=13% Similarity=0.158 Sum_probs=151.9
Q ss_pred CHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhH---HhhcCCCCccCCCCCC
Q 011856 138 CLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPF---LVKAGSGVATLGLPDS 214 (476)
Q Consensus 138 ~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~---~~~~g~~~~~~~~~~~ 214 (476)
++...+|+++++++. +.+.+++++||+.|+..++. ....+++||+.+..|.+..... +...|.
T Consensus 132 npt~~aLE~~lA~le-g~e~ai~~~SG~aAi~~il~---ll~~GD~VI~~~~~y~~t~~ll~~~l~~~G~---------- 197 (464)
T PLN02509 132 NPTRDALESLLAKLD-KADRAFCFTSGMAALSAVTH---LIKNGEEIVAGDDVYGGSDRLLSQVVPRSGV---------- 197 (464)
T ss_pred CHHHHHHHHHHHHHh-CCCEEEEeCcHHHHHHHHHH---HhCCCCEEEEcCCchhhHHHHHHHHHHHCCe----------
Confidence 467888999999887 56788888999998865554 3456788888888876643221 111121
Q ss_pred CCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-Ccc
Q 011856 215 PGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GFR 293 (476)
Q Consensus 215 ~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~r 293 (476)
.+..++.+|++++++.++. ++++|++|.++|+.|.+.+ +++|.++|++||+++|+||+|. ++.
T Consensus 198 ---------~v~~vd~~d~e~l~~ai~~---~TklV~lesPsNPtG~i~D----l~~I~~lAk~~g~~lIVD~A~a~~~~ 261 (464)
T PLN02509 198 ---------VVKRVNTTNLDEVAAAIGP---QTKLVWLESPTNPRQQISD----IRKIAEMAHAQGALVLVDNSIMSPVL 261 (464)
T ss_pred ---------EEEEeCCCCHHHHHHhCCc---CCeEEEEECCCCCCCCHHH----HHHHHHHHHHcCCEEEEECCcccccc
Confidence 2444556688999988853 6789999999888898877 9999999999999999999994 221
Q ss_pred ccccchhhccCCCCchh--hhhhhcCC-C-CcEEEEEec-HHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCC
Q 011856 294 LAYGGAQEYFGVTPDLT--TLGKIIGG-G-LPVGAYGGR-RDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPG 368 (476)
Q Consensus 294 ~g~~~~~~~~g~~pDi~--t~sK~lg~-G-~~iG~~~~~-~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~ 368 (476)
+ ...+...|++ +++|.++| | .-.|+++++ +++.+.+.... ...+ ...+|..++.++..|+.+ +.
T Consensus 262 -~-----~pl~~gaDivv~S~tK~l~G~gdv~gG~v~~~~~~l~~~~~~~~--~~~g-~~l~p~~A~l~lr~L~tL--~~ 330 (464)
T PLN02509 262 -S-----RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQ--NSEG-SGLAPFDCWLCLRGIKTM--AL 330 (464)
T ss_pred -C-----ChhhcCCcEEEecCcccccCCCccceeEEEeccHHHHHHHHHHH--HhcC-CCcCHHHHHHHHhhhhhH--HH
Confidence 1 1122345766 68899985 3 335666654 44444332100 0111 234777888777777765 44
Q ss_pred HHHHHHHHHHHHHHHHHHHhh----hcC-Cc---------eEeeeeceeEEEEE
Q 011856 369 TYEYLNKITGELTQGIIDAGK----KAG-HA---------ICGGYISGMFGFFF 408 (476)
Q Consensus 369 ~~~~~~~~~~~l~~~L~~~~~----~~~-~~---------~~v~~~g~~~~i~~ 408 (476)
.+++..++..++.+.|++... .|| ++ ....+.|.|+.|++
T Consensus 331 R~~r~~~nA~~la~~L~~~p~V~~V~yPgL~~~p~~~l~~~~~~g~gg~~sf~~ 384 (464)
T PLN02509 331 RIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFIT 384 (464)
T ss_pred HHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEe
Confidence 667777888888888875321 011 10 12346688989987
No 305
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.63 E-value=7.3e-14 Score=138.74 Aligned_cols=280 Identities=12% Similarity=0.113 Sum_probs=173.1
Q ss_pred CHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHH---hhcCCCCccCCCCCC
Q 011856 138 CLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFL---VKAGSGVATLGLPDS 214 (476)
Q Consensus 138 ~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~---~~~g~~~~~~~~~~~ 214 (476)
.+...+|++++++++ +.+.+++++||+.|+..++. ....++.|++.+..|.+...... ...|.
T Consensus 46 ~p~~~~le~~la~l~-g~~~~l~~~sG~~al~~~l~---ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~---------- 111 (378)
T TIGR01329 46 NPTRTALESLLAKLD-KADRAFAFSSGMAALDVITR---LLNNGDEIIAGDDLYGGTDRLLTQVVPRSGV---------- 111 (378)
T ss_pred ChHHHHHHHHHHHHh-CCCcEEEECCHHHHHHHHHH---HhCCCCEEEEcCCCchHHHHHHHHHHHHcCc----------
Confidence 445678888888877 45788889999999887765 34566778887777765322111 11121
Q ss_pred CCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-Ccc
Q 011856 215 PGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GFR 293 (476)
Q Consensus 215 ~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~r 293 (476)
++..++..|++++++.++. ++++|++|.+.|+.|.+.+ +++|.++|++||+++|+|++|. ++.
T Consensus 112 ---------~v~~vd~~d~~~le~~i~~---~tklv~le~psnptg~v~d----l~~I~~la~~~g~~vivD~a~~~~~~ 175 (378)
T TIGR01329 112 ---------VVVHVDTTDLDKVKAALGP---KTKLVLLESPTNPLQKIVD----IRKISEMAHAQNALVVVDNTMMSPLL 175 (378)
T ss_pred ---------EEEEeCCCCHHHHHHhcCc---CceEEEEECCCCCCCeeec----HHHHHHHHHHcCCEEEEECCCccccc
Confidence 3445555689999998863 6889999988888999988 9999999999999999999983 321
Q ss_pred ccccchhhccCCCCchh--hhhhhcCC--CCcEEEEEec-HHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCC
Q 011856 294 LAYGGAQEYFGVTPDLT--TLGKIIGG--GLPVGAYGGR-RDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPG 368 (476)
Q Consensus 294 ~g~~~~~~~~g~~pDi~--t~sK~lg~--G~~iG~~~~~-~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~ 368 (476)
. ...+...|++ +++|.++| ++..|+++++ +++.+.+.. .........+|..+..++..++.+ +.
T Consensus 176 ~------~~l~~g~Di~v~S~tK~l~G~~~~~~G~v~~~~~~~~~~~~~---~~~~~G~~~~~~~a~l~~~~l~tl--~~ 244 (378)
T TIGR01329 176 C------NPLELGADIVYHSATKFLAGHSDVMAGVLAVKGEEIAKKVYF---LQNSTGSGLAPFDCWLLLRGIKTL--AI 244 (378)
T ss_pred C------ChhhcCCcEEEEecceeccCCccceeEEEEeCcHHHHHHHHH---HHHhcCCcCCHHHHHHHHccCCCH--HH
Confidence 1 1112234765 67899985 3678888774 555555542 111112244566554433333211 44
Q ss_pred HHHHHHHHHHHHHHHHHHHhhh----cC-Cce---------EeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHH
Q 011856 369 TYEYLNKITGELTQGIIDAGKK----AG-HAI---------CGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGM 434 (476)
Q Consensus 369 ~~~~~~~~~~~l~~~L~~~~~~----~~-~~~---------~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l 434 (476)
..++..++...+.+.|++.-.. ++ +.. ...+.|.++.|++.+ .....+|...|
T Consensus 245 R~e~~~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~~-------------~~~~~~~~~~L 311 (378)
T TIGR01329 245 RIEKQQENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETGS-------------VALSKRLVEAT 311 (378)
T ss_pred HHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEECC-------------HHHHHHHHHhC
Confidence 5566667777777766643110 11 000 123567888888831 12245677777
Q ss_pred HHCCeEeccCCCcc---------------------------eEEeCCCcHHHHHHHHHHHHHHHHH
Q 011856 435 LEEGVYFAPSQFEA---------------------------GFTSLAHSSDDIQHTITAAEKVKMR 473 (476)
Q Consensus 435 ~~~Gv~~~~~~~~~---------------------------~~~~~~~t~e~i~~~~~~l~~~~~~ 473 (476)
...++.++.++... +|++... ||.+.+++-|++++++
T Consensus 312 ~~~~i~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGl--E~~~dl~~dl~~al~~ 375 (378)
T TIGR01329 312 KLFSITVSFGSVNSLISMPCFMSHASIPAEVREERGLPEDLVRLSVGI--EDVDDLISDLDIAFVT 375 (378)
T ss_pred cCcccccCCCCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEecc--CCHHHHHHHHHHHHHh
Confidence 55455554443222 3444333 5677778888887764
No 306
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.62 E-value=1.8e-15 Score=145.45 Aligned_cols=228 Identities=16% Similarity=0.074 Sum_probs=135.6
Q ss_pred CCCHHHHHHHHHHHhhCCCCCeEEE-eCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCC
Q 011856 136 APCLLENVLAEMVISAVPSIEMVRF-VNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDS 214 (476)
Q Consensus 136 ~~~~~~~~la~~l~~~~~~~e~v~~-~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~ 214 (476)
.|.....++.+.+++++ +.++++| ++|+++++..++... ..++++|++..+ .|......+...|..+........
T Consensus 56 ~~~g~i~~~~~~~A~~~-ga~~~~~~~~Gst~a~~~~l~al--~~~gd~Vlv~~~-~h~s~~~~~~~~g~~~~~v~~~~~ 131 (294)
T cd00615 56 DPTGPIKEAQELAARAF-GAKHTFFLVNGTSSSNKAVILAV--CGPGDKILIDRN-CHKSVINGLVLSGAVPVYLKPERN 131 (294)
T ss_pred CCChHHHHHHHHHHHHh-CCCCEEEEcCcHHHHHHHHHHHc--CCCCCEEEEeCC-chHHHHHHHHHCCCEEEEecCccC
Confidence 45666677777777777 4455655 898999999998842 334455655554 455455555555543322211111
Q ss_pred CCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEE-EEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-
Q 011856 215 PGVPKGATYETLTAPFNDVSALENLFENNKGEIAA-IILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF- 292 (476)
Q Consensus 215 ~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~-vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~- 292 (476)
... -..-..|++++++.+++++ ++++ ++++| +..|.+.+ +++|.++|++||+++|+||+|...
T Consensus 132 ~~~--------~~~~~i~~~~l~~~l~~~~-~~k~v~l~~p--~~~G~~~d----l~~I~~~~~~~g~~livDeA~~~~~ 196 (294)
T cd00615 132 PYY--------GIAGGIPPETFKKALIEHP-DAKAAVITNP--TYYGICYN----LRKIVEEAHHRGLPVLVDEAHGAHF 196 (294)
T ss_pred ccc--------CcCCCCCHHHHHHHHHhCC-CceEEEEECC--CCCCEecC----HHHHHHHHHhcCCeEEEECcchhhh
Confidence 100 0000127999999997643 3444 44455 34788888 999999999999999999999542
Q ss_pred cccccchhhccCCCCchh--hhhhhcCCCCcEEEE-EecHHH--HHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC-
Q 011856 293 RLAYGGAQEYFGVTPDLT--TLGKIIGGGLPVGAY-GGRRDI--MEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE- 366 (476)
Q Consensus 293 r~g~~~~~~~~g~~pDi~--t~sK~lg~G~~iG~~-~~~~~i--~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~- 366 (476)
..+............|++ +++|+++ |++.|++ ..+.+. .+.+.. ......|.+.+.+.+++..++++.+..
T Consensus 197 ~~~~~~~~~~~~~~~div~~S~hK~l~-g~~~~~~l~~~~~~~~~~~~~~--~~~~~~ttsps~~~~asl~~a~~~~~~~ 273 (294)
T cd00615 197 RFHPILPSSAAMAGADIVVQSTHKTLP-ALTQGSMIHVKGDLVNPDRVNE--ALNLHQSTSPSYLILASLDVARAMMALE 273 (294)
T ss_pred ccCcccCcchhhcCCcEEEEchhcccc-hHhHHHHHHhCCCcCCHHHHHH--HHHHHCCCCcHHHHHHHHHHHHHHHHHH
Confidence 222111111112234665 6889874 5655444 344332 122221 112233556777778887788876643
Q ss_pred -CCHHHHHHHHHHHHHHHHH
Q 011856 367 -PGTYEYLNKITGELTQGII 385 (476)
Q Consensus 367 -~~~~~~~~~~~~~l~~~L~ 385 (476)
+++.+++.++.+++++.|+
T Consensus 274 g~~~~~~~~~~~~~~r~~l~ 293 (294)
T cd00615 274 GKELVEELIELALYARQEIN 293 (294)
T ss_pred hHHHHHHHHHHHHHHHHHHh
Confidence 5667777888888877765
No 307
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.62 E-value=3.4e-13 Score=138.06 Aligned_cols=320 Identities=17% Similarity=0.198 Sum_probs=180.1
Q ss_pred CCcHHHHHHHHHHHH--hcCCCCC------CCHHHHHHHHHHHhhCCCCCe-EEEeCCHHHHHHHHHHHHHhc--c----
Q 011856 115 HADDQVLAALGETMK--KGTSFGA------PCLLENVLAEMVISAVPSIEM-VRFVNSGTEACMGVLRLARAF--T---- 179 (476)
Q Consensus 115 ~~~p~v~~a~~~~l~--~~~~~~~------~~~~~~~la~~l~~~~~~~e~-v~~~~sGseA~~~al~~ar~~--~---- 179 (476)
|-+|.+.+++.+... ..+.|.. ..+...++.++++++++ .+. .++.++|+.+...++.+++.+ .
T Consensus 81 ~~~p~i~~~~~~~~~~~~~tpYq~e~~sqG~lel~~~~~~~la~l~G-~~~~~l~~~~GA~a~~~~l~~~r~~~~~~Gd~ 159 (481)
T PRK04366 81 KYNPKINEKVARLPGFAELHPLQPEETVQGALELMYELQEWLKEITG-MDAVTLQPAAGAHGELTGLLMIRAYHEARGDT 159 (481)
T ss_pred CCCHHHHHHHHhCcchhcCCCCCChhhhhHHHHHHHHHHHHHHHHhC-CCceEEEeCcHHHHHHHHHHHHHHHhhccCcC
Confidence 457888888876521 1222311 12556788888888884 334 444567777766655444332 1
Q ss_pred CCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCC
Q 011856 180 GRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNS 259 (476)
Q Consensus 180 ~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~ 259 (476)
++++|++.++ .|..+...+...|..+...+... .+ ..|+++|++.++. ++++|++...+ .+
T Consensus 160 ~~~~Vlv~~~-~hp~~~~~~~~~G~~vv~v~~~~-~~-------------~~D~e~L~~~i~~---~t~~V~v~~Pn-~t 220 (481)
T PRK04366 160 KRTEVIVPDS-AHGTNPASAAMAGFKVVEIPSNE-DG-------------LVDLEALKAAVGE---DTAALMLTNPN-TL 220 (481)
T ss_pred CCCEEEEcCC-ccHhHHHHHHHcCCEEEEeecCC-CC-------------CcCHHHHHhhccc---CCeEEEEeCCC-Cc
Confidence 2346777665 45555555555554433322210 01 1278999988863 46666554433 56
Q ss_pred CcccCCHHHHHHHHHHHHHhCCEEEEecccc-CccccccchhhccCCCCchhh--hhhhcC-----CCCcEEEEEecHHH
Q 011856 260 GFIAPKPDFLNAIRRITKENGALLIFDEVMT-GFRLAYGGAQEYFGVTPDLTT--LGKIIG-----GGLPVGAYGGRRDI 331 (476)
Q Consensus 260 G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~r~g~~~~~~~~g~~pDi~t--~sK~lg-----~G~~iG~~~~~~~i 331 (476)
|.+ ..+ +++|.++|+++|+++|+|+++. +. .+.. ....+| .|+++ .-|.|+ ||--+|++.+++++
T Consensus 221 G~~--~~d-l~eI~~~a~~~gal~iVD~a~~~~~-~g~~-~~~~~G--aD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~~ 293 (481)
T PRK04366 221 GLF--ERN-ILEIAEIVHEAGGLLYYDGANLNAI-LGKA-RPGDMG--FDVVHLNLHKTFSTPHGGGGPGSGPVGVKEEL 293 (481)
T ss_pred ccc--chH-HHHHHHHHHHcCCEEEEEecChhhh-cccC-CccccC--CCEEEEechhhcCCCCCCCCCCeeeeeehhhh
Confidence 655 112 9999999999999999999983 21 1111 112233 47764 349886 23347788888888
Q ss_pred HHhhcCC-----CCcc-----------ccCCCCCcHHHHHHHHHHHHHhcCC---CHHHHHHHHHHHHHHHHHHHhhhcC
Q 011856 332 MEMVAPA-----GPMY-----------QAGTLSGNPLAMTAGIHTLKRLKEP---GTYEYLNKITGELTQGIIDAGKKAG 392 (476)
Q Consensus 332 ~~~l~~~-----~~~~-----------~~~t~~~~~~~~aaa~aal~~~~~~---~~~~~~~~~~~~l~~~L~~~~~~~~ 392 (476)
.+.+... +..+ ..-.++++.+.+.++...+..+..+ +..++...+.++++++|.++ . .
T Consensus 294 ~~~lp~~~v~~~g~~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~~-~--~ 370 (481)
T PRK04366 294 APFLPVPVVEKDGDRYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKARLKDI-Y--D 370 (481)
T ss_pred HhhCCCCeeeccCCceeecccccccCCCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhh-C--c
Confidence 7766310 0000 0111223445555555555554434 33455677788999999886 2 2
Q ss_pred CceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCC-----CcceEEe--CCCcHHHHHHHHH
Q 011856 393 HAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ-----FEAGFTS--LAHSSDDIQHTIT 465 (476)
Q Consensus 393 ~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~-----~~~~~~~--~~~t~e~i~~~~~ 465 (476)
+.. .+ ..+-.+.+...... .+.....++.+.|.++|+.+.... ...++++ ..+|++|||++++
T Consensus 371 ~~~--~~-~~~~~~~~~~~~~~-------~~g~~~~~v~~~L~~~Gi~~~~~~~p~~~~~~l~is~~e~~t~edid~l~~ 440 (481)
T PRK04366 371 LPY--DR-PCMHEFVLSGKKLK-------ETGVRTLDIAKRLLDYGFHPPTIYFPLIVPEALMIEPTETESKETLDAFIA 440 (481)
T ss_pred ccC--CC-CeeEEEEEECcccc-------ccCCCHHHHHHHHHHCCccCCccccccccCCeEEEcccCCCCHHHHHHHHH
Confidence 221 11 11111111110000 000123678899999999876322 2234554 5779999999999
Q ss_pred HHHHHHHHh
Q 011856 466 AAEKVKMRF 474 (476)
Q Consensus 466 ~l~~~~~~~ 474 (476)
.|+++.+++
T Consensus 441 ~l~~i~~~~ 449 (481)
T PRK04366 441 AMKQIAEEA 449 (481)
T ss_pred HHHHHHHHH
Confidence 999987764
No 308
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.60 E-value=2.3e-13 Score=136.84 Aligned_cols=159 Identities=18% Similarity=0.177 Sum_probs=114.5
Q ss_pred CCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCC
Q 011856 137 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPG 216 (476)
Q Consensus 137 ~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~ 216 (476)
.++....|.+.++++. +.+..++++||+.|+..++... ...+++|++.++.|++..........
T Consensus 62 ~~p~~~~Le~~lA~le-g~~~al~~~sG~~Ai~~al~~l--l~~GD~Vlv~~~~y~~t~~~~~~~~~------------- 125 (431)
T PRK08248 62 MNPTTDVFEKRIAALE-GGIGALAVSSGQAAITYSILNI--ASAGDEIVSSSSLYGGTYNLFAHTLP------------- 125 (431)
T ss_pred CCchHHHHHHHHHHHh-CCCcEEEECCHHHHHHHHHHHH--hCCCCEEEEccCchhhHHHHHHHHHH-------------
Confidence 4556678888888888 5678899999999999999742 44567888888777764432211100
Q ss_pred CCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-Ccccc
Q 011856 217 VPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GFRLA 295 (476)
Q Consensus 217 ~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~r~g 295 (476)
..+.++..++..|++++++.+++ ++++|+++.+.|++|.+.+ +++|.++|+++|+++|+|+++. ++.
T Consensus 126 ---~~Gv~v~~vd~~d~e~l~~ai~~---~tklV~l~sp~NPtG~v~d----i~~I~~la~~~gi~vIvD~t~a~~~~-- 193 (431)
T PRK08248 126 ---KLGITVKFVDPSDPENFEAAITD---KTKALFAETIGNPKGDVLD----IEAVAAIAHEHGIPLIVDNTFASPYL-- 193 (431)
T ss_pred ---hCCEEEEEECCCCHHHHHHhcCC---CCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEEEeCCCCcccc--
Confidence 01113555566689999998864 5788888887788899998 8999999999999999999984 221
Q ss_pred ccchhhccCCCCchh--hhhhhcCC-CCcEEEEEe
Q 011856 296 YGGAQEYFGVTPDLT--TLGKIIGG-GLPVGAYGG 327 (476)
Q Consensus 296 ~~~~~~~~g~~pDi~--t~sK~lg~-G~~iG~~~~ 327 (476)
+.......|++ +++|.+++ |.++|+++.
T Consensus 194 ----~~pl~~gaDivv~S~tK~lgg~g~~~Gg~v~ 224 (431)
T PRK08248 194 ----LRPIEHGADIVVHSATKFIGGHGTSIGGVIV 224 (431)
T ss_pred ----CChhHcCCCEEEEcCccccCCCCCceEEEEE
Confidence 11112235665 67899995 778888755
No 309
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.60 E-value=1.8e-13 Score=135.25 Aligned_cols=237 Identities=13% Similarity=0.050 Sum_probs=148.7
Q ss_pred CCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCC
Q 011856 137 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPG 216 (476)
Q Consensus 137 ~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~ 216 (476)
.++....|++.++.... .+..++++||++|+..++.. ....+++||+.++.|.++....-.... ..|
T Consensus 62 gnPt~~~Le~~la~le~-~~~~v~~sSG~aAi~~~l~a--ll~~GD~Vlv~~~~Y~~~~~l~~~~l~----------~~G 128 (395)
T PRK05967 62 GTPTTDALCKAIDALEG-SAGTILVPSGLAAVTVPFLG--FLSPGDHALIVDSVYYPTRHFCDTMLK----------RLG 128 (395)
T ss_pred CChHHHHHHHHHHHHhC-CCCEEEECcHHHHHHHHHHH--hcCCCCEEEEccCCcHHHHHHHHHHHH----------hcC
Confidence 46777888888887763 44556777799999999874 245678899988888875432211100 001
Q ss_pred CCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCccccc
Q 011856 217 VPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY 296 (476)
Q Consensus 217 ~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~ 296 (476)
.++..++.++.+.+++.+++ ++++|++|.+.|+.+.+.+ +++|.++|+++|+++|+|+++...
T Consensus 129 ------i~v~~vd~~~~e~l~~al~~---~TklV~lesPsNP~l~v~d----l~~I~~la~~~g~~vvVD~t~a~p---- 191 (395)
T PRK05967 129 ------VEVEYYDPEIGAGIAKLMRP---NTKVVHTEAPGSNTFEMQD----IPAIAEAAHRHGAIVMMDNTWATP---- 191 (395)
T ss_pred ------eEEEEeCCCCHHHHHHhcCc---CceEEEEECCCCCCCcHHH----HHHHHHHHHHhCCEEEEECCccCc----
Confidence 12334444466788888864 5889999977777777776 999999999999999999999532
Q ss_pred cchhhccCCCCchh--hhhhhcCC--CCcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHHHH
Q 011856 297 GGAQEYFGVTPDLT--TLGKIIGG--GLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEY 372 (476)
Q Consensus 297 ~~~~~~~g~~pDi~--t~sK~lg~--G~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~ 372 (476)
..+..+....|++ +++|.++| ..-+|++++++++.+.+... ....+. ..+|..+...+..|+-+ +-..++
T Consensus 192 -~~~~pl~~GaDivv~S~tKy~~Gh~d~~~G~v~~~~~~~~~l~~~--~~~~G~-~~~p~da~l~~rgl~Tl--~lR~~~ 265 (395)
T PRK05967 192 -LYFRPLDFGVDISIHAATKYPSGHSDILLGTVSANEKCWPQLLEA--HGTLGL-CAGPDDTYQILRGLRTM--GIRLEH 265 (395)
T ss_pred -eecChhHcCCCEEEEecccccCCCCCeeEEEEEcCHHHHHHHHHH--HHHcCC-CCCHHHHHHHHcCcccH--HHHHHH
Confidence 1112222335665 68899985 36788778888766655421 111122 35666655544444322 233455
Q ss_pred HHHHHHHHHHHHHHHhh----hcC-Cc---------eEeeeeceeEEEEEe
Q 011856 373 LNKITGELTQGIIDAGK----KAG-HA---------ICGGYISGMFGFFFT 409 (476)
Q Consensus 373 ~~~~~~~l~~~L~~~~~----~~~-~~---------~~v~~~g~~~~i~~~ 409 (476)
..++...+.+.|++... .|| +. ....+.|.|+.|++.
T Consensus 266 ~~~na~~lA~~L~~hp~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~ 316 (395)
T PRK05967 266 HRKSALEIARWLEGRPDVARVLHPALPSFPGHEIWKRDFSGASGIFSFVLA 316 (395)
T ss_pred HHHHHHHHHHHHHhCCCCcEEECCCCCCCccHHHHHHhCCCCceEEEEEEc
Confidence 55666666666665310 011 00 012467889999985
No 310
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.60 E-value=3.1e-13 Score=130.01 Aligned_cols=197 Identities=23% Similarity=0.281 Sum_probs=130.3
Q ss_pred EEEecccChhhccCCCCcHHHHHHHHHHHHhcC---C---CCCCCHH-HHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHH
Q 011856 100 EYIDYVGSWGPAIIGHADDQVLAALGETMKKGT---S---FGAPCLL-ENVLAEMVISAVP-SIEMVRFVNSGTEACMGV 171 (476)
Q Consensus 100 ~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~---~---~~~~~~~-~~~la~~l~~~~~-~~e~v~~~~sGseA~~~a 171 (476)
-|+|..+. |-.+|.|.+|+.+.+.... + ++.-.+. .++-++.++++.. +..+|+||+++||++..+
T Consensus 45 vyld~~at------~p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklInAd~~dIiFts~ATEs~Nlv 118 (428)
T KOG1549|consen 45 VYLDNQAT------GPMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLINADPSDIVFTSGATESNNLV 118 (428)
T ss_pred EEEecCcC------CCCCHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHhCCCCCcEEEeCCchHHHHHH
Confidence 46665443 4468999999999887631 1 1111222 3445556666666 555699999999999999
Q ss_pred HHH-HHhccC-Cc-eEEEEeCCCCCCchhHHhhc--CCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCC
Q 011856 172 LRL-ARAFTG-RE-RIIKFEGCYHGHADPFLVKA--GSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGE 246 (476)
Q Consensus 172 l~~-ar~~~~-~~-~ii~~~~~yhg~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~ 246 (476)
++- ++.+.. .+ .||.++..|-...+++..+. |..+..++++ ..+. -|++.+++.++. +
T Consensus 119 l~~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~-~~~~-------------~d~~~~~~~i~~---~ 181 (428)
T KOG1549|consen 119 LKGVARFFGDKTKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVE-DSGL-------------VDISKLREAIRS---K 181 (428)
T ss_pred HHHhhccccccccceEEEecccCcchhHHHHHHHhcCeEEEEeccC-cccc-------------ccHHHHHHhcCC---C
Confidence 984 333332 33 55555444433344443332 3322222222 1111 178889999874 8
Q ss_pred eEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCccccccchhhccCCCCchhhhh--hhcCC-CCcEE
Q 011856 247 IAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLG--KIIGG-GLPVG 323 (476)
Q Consensus 247 ~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pDi~t~s--K~lg~-G~~iG 323 (476)
+++|.+..++++.|.+.| +++|.++|+++|+.+++|-+|. .|. ...+--.+.+|+++++ |.+|. | +|
T Consensus 182 T~lv~I~~Vnn~~gv~~P----v~EI~~icr~~~v~v~~DaAQa---vG~-i~vDV~eln~D~~s~s~HK~ygp~~--iG 251 (428)
T KOG1549|consen 182 TRLVSIMHVNNEIGVLQP----VKEIVKICREEGVQVHVDAAQA---VGK-IPVDVQELNADFLSISAHKIYGPPG--IG 251 (428)
T ss_pred ceEEEEEecccCcccccc----HHHHHHHhCcCCcEEEeehhhh---cCC-ccccHHHcCchheeeecccccCCCc--ce
Confidence 999999999999999999 9999999999999999999994 221 1122234467877654 99984 4 99
Q ss_pred EEEecH
Q 011856 324 AYGGRR 329 (476)
Q Consensus 324 ~~~~~~ 329 (476)
++.+++
T Consensus 252 aLYvr~ 257 (428)
T KOG1549|consen 252 ALYVRR 257 (428)
T ss_pred EEEEcc
Confidence 998876
No 311
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.60 E-value=5.8e-13 Score=133.46 Aligned_cols=326 Identities=12% Similarity=-0.003 Sum_probs=190.5
Q ss_pred CcHHHHHHHHHHHHhc--C--CCCCCCHHHHHHHHHHHhhCCCC---CeEEE--eCCHHHHHHHHHHHHHhcc-------
Q 011856 116 ADDQVLAALGETMKKG--T--SFGAPCLLENVLAEMVISAVPSI---EMVRF--VNSGTEACMGVLRLARAFT------- 179 (476)
Q Consensus 116 ~~p~v~~a~~~~l~~~--~--~~~~~~~~~~~la~~l~~~~~~~---e~v~~--~~sGseA~~~al~~ar~~~------- 179 (476)
.+|++.+++.+.+... . ..+...+.+++..+++++.++.. +++.| |+||||||..|++.+|...
T Consensus 53 ~~p~~~~~~~~~l~~~~~np~s~~~~~~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~ 132 (431)
T TIGR01788 53 MEPEARKLMDETINKNMIDKDEYPQTAEIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAA 132 (431)
T ss_pred CCHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHHhc
Confidence 5788999998888642 1 12223477888899999988622 45666 7999999999998775320
Q ss_pred C---CceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccC
Q 011856 180 G---RERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVV 256 (476)
Q Consensus 180 ~---~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~ 256 (476)
+ ....|+....-|-+...+....|..+..++.....+. -|+++|++.+++ ++.+|++...+
T Consensus 133 g~~~~~~~ii~s~~~H~sv~ka~~~lg~~v~~i~~d~~~~~-------------vd~~~L~~~i~~---~t~lV~~t~g~ 196 (431)
T TIGR01788 133 GKPTDKPNLVMGSNVQVCWEKFARYFDVELREVPMDPGRYV-------------IDPEQVVEAVDE---NTIGVVCILGT 196 (431)
T ss_pred CCCCCCcEEEEcCcchHHHHHHHHHcCceeEEEecCCCcee-------------eCHHHHHHHHhh---CCeEEEEEeCC
Confidence 1 1234555555565554444444433222111110000 189999999974 57788888888
Q ss_pred CCCCcccCCHHHHHHHHHHHHHh------CCEEEEeccccCc-c---ccccchhhccCCCCchhhhh--hhcCCCCcEEE
Q 011856 257 GNSGFIAPKPDFLNAIRRITKEN------GALLIFDEVMTGF-R---LAYGGAQEYFGVTPDLTTLG--KIIGGGLPVGA 324 (476)
Q Consensus 257 ~~~G~i~~~~~~l~~l~~l~~~~------g~llI~DEv~~g~-r---~g~~~~~~~~g~~pDi~t~s--K~lg~G~~iG~ 324 (476)
++.|.+.| +++|.++|+++ |+++++|-+|.|+ . .+.. ....-....|.++++ |.+.+...+|+
T Consensus 197 t~tG~idp----i~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~-~~~~~~~~~DSis~s~HK~~~~P~g~G~ 271 (431)
T TIGR01788 197 TYTGEYED----VKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDL-EWDFRLPRVKSINVSGHKYGLVYPGVGW 271 (431)
T ss_pred CCCcccCC----HHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCc-hhhcCCCCceEEEECchhccCCCCCcEE
Confidence 99999999 99999999999 9999999999875 2 1211 111001134667665 86544456899
Q ss_pred EEecHH--HHHhhcCCCCcccc----CCCCCcHH--HHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHHHHHHhhhcCC
Q 011856 325 YGGRRD--IMEMVAPAGPMYQA----GTLSGNPL--AMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAGH 393 (476)
Q Consensus 325 ~~~~~~--i~~~l~~~~~~~~~----~t~~~~~~--~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~ 393 (476)
++.+++ +.+.+.....+... .+..++.. ...+....|..+.. ++..++..++.+++.++|++.. . +
T Consensus 272 l~~r~~~~l~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~-~--~ 348 (431)
T TIGR01788 272 VIWRDEEALPEELIFHVNYLGGDEPTFTLNFSRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLG-P--F 348 (431)
T ss_pred EEEeChHHcchhheecccccCCCCCCcceecCchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCC-C--E
Confidence 877654 33333211001100 12222211 22223333433332 5566677777888888777641 1 1
Q ss_pred ceEee-eeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCC-------cceEE--eCCCcHHHHHHH
Q 011856 394 AICGG-YISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-------EAGFT--SLAHSSDDIQHT 463 (476)
Q Consensus 394 ~~~v~-~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~-------~~~~~--~~~~t~e~i~~~ 463 (476)
....+ ....++.|.+..... ......++.+.|.++|+.+..... ..+|+ ...++++.++++
T Consensus 349 el~~~~~~~~iV~Fr~~~~~~---------~~~~~~~l~~~L~~~G~~~~~~~~p~~~~~~~~lR~~~~~~~~~~~~~~~ 419 (431)
T TIGR01788 349 EIISDGSGIPLVAFKLKDDAD---------PGYTLYDLSHRLRERGWIVPAYTLPKNAEDIVVMRIVVREGFSRDLAELL 419 (431)
T ss_pred EEeeCCCCceEEEEEeCCCCC---------CCcCHHHHHHHHHHCCCcccCCCCCCccCCeEEEEEEecCCCCHHHHHHH
Confidence 11111 233444555432110 011235688889999986432221 12344 346689999999
Q ss_pred HHHHHHHHHHh
Q 011856 464 ITAAEKVKMRF 474 (476)
Q Consensus 464 ~~~l~~~~~~~ 474 (476)
++.|++++..+
T Consensus 420 ~~~~~~~~~~~ 430 (431)
T TIGR01788 420 IEDIEAALAYL 430 (431)
T ss_pred HHHHHHHHHhh
Confidence 99999988754
No 312
>PRK04311 selenocysteine synthase; Provisional
Probab=99.60 E-value=8e-13 Score=133.25 Aligned_cols=316 Identities=16% Similarity=0.124 Sum_probs=181.3
Q ss_pred CcHHHHHHHHHHHHhcCC--CCC----CCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeC
Q 011856 116 ADDQVLAALGETMKKGTS--FGA----PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEG 189 (476)
Q Consensus 116 ~~p~v~~a~~~~l~~~~~--~~~----~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~ 189 (476)
-++++.+++.+.+..... +.. ..+....+.+.+++++ +.+.++++|||+.|+..++. .+..+++||+.++
T Consensus 98 l~~~v~eav~~~~~~~~~le~~l~~g~~g~r~~~~e~~lA~l~-Gae~a~vv~sgtaAl~l~l~---~l~~GdeVIvs~~ 173 (464)
T PRK04311 98 LSEAAIEAVTEAARGYSNLEYDLATGKRGSRDRALAALLCALT-GAEDALVVNNNAAAVLLALN---ALAAGKEVIVSRG 173 (464)
T ss_pred CCHHHHHHHHHHHhcccccccchhhcccchHHHHHHHHHHHHh-CCCeEEEECCHHHHHHHHHH---HhCCCCEEEEcch
Confidence 468999999988876421 111 1233457778888777 66789999999999999886 4567788888765
Q ss_pred C-CC-CCch---hHHhhcCCCCccCCCCCCCCCCCCCCCceeeccC---CCHHHHHHHHhcCCCCeEEEEEcccCCC--C
Q 011856 190 C-YH-GHAD---PFLVKAGSGVATLGLPDSPGVPKGATYETLTAPF---NDVSALENLFENNKGEIAAIILEPVVGN--S 259 (476)
Q Consensus 190 ~-yh-g~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~d~~~le~~l~~~~~~~a~vi~ep~~~~--~ 259 (476)
. |+ |... ..+...|.. +..++. .+++++++.+++ ++++|+++...+. .
T Consensus 174 e~~~~ggs~~i~~~~~~~G~~-------------------l~~v~~~~~t~~~dle~aI~~---~TklV~~vh~sN~~i~ 231 (464)
T PRK04311 174 ELVEIGGAFRIPDVMRQAGAR-------------------LVEVGTTNRTHLRDYEQAINE---NTALLLKVHTSNYRIE 231 (464)
T ss_pred hhhhcCcchhhHHHHHHCCcE-------------------EEEECCCCCCCHHHHHHhcCc---cCeEEEEEcCCCcccc
Confidence 3 32 2111 122222321 222222 268889998864 5777777765442 3
Q ss_pred C--cccCCHHHHHHHHHHHHHhCCEEEEeccccCcc-cc------ccchhhccCCCCchhhhh--hhcCCCCcEEEEEec
Q 011856 260 G--FIAPKPDFLNAIRRITKENGALLIFDEVMTGFR-LA------YGGAQEYFGVTPDLTTLG--KIIGGGLPVGAYGGR 328 (476)
Q Consensus 260 G--~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r-~g------~~~~~~~~g~~pDi~t~s--K~lg~G~~iG~~~~~ 328 (476)
| ...+ +++|.++|++||+++|+|....-+. .+ ....++......|++++| |.++|. ..|+++++
T Consensus 232 G~~~~~d----l~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~LgGp-~~G~i~g~ 306 (464)
T PRK04311 232 GFTKEVS----LAELAALGKEHGLPVVYDLGSGSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLGGP-QAGIIVGK 306 (464)
T ss_pred ccCCcCC----HHHHHHHHHHcCCeEEEECCCcccccchhccCCCCCchhhHHhcCCcEEEecCcccccCC-ceEEEEEc
Confidence 4 3456 9999999999999999999531111 11 111122223456888777 999864 37888999
Q ss_pred HHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC--CCH------------HHHHHHHHHHHHHHHHHHhhhcCCc
Q 011856 329 RDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--PGT------------YEYLNKITGELTQGIIDAGKKAGHA 394 (476)
Q Consensus 329 ~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~------------~~~~~~~~~~l~~~L~~~~~~~~~~ 394 (476)
+++++.++.. + ..-.+..+-...++-.++|..+.+ +.+ .+++.++...+.+.|++.... +..
T Consensus 307 ~~li~~l~~~-~--~~r~lr~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~~~-~~~ 382 (464)
T PRK04311 307 KELIARLKKH-P--LKRALRVDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKAALGA-AFA 382 (464)
T ss_pred HHHHHHHhhc-h--hHHHHhcchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhccCC-Cee
Confidence 9999877631 1 111122233444455555553321 112 266667777777777664211 111
Q ss_pred eEe------eeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHH--CCeEeccCCCcceEE-eCCCcHHHHHHHHH
Q 011856 395 ICG------GYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLE--EGVYFAPSQFEAGFT-SLAHSSDDIQHTIT 465 (476)
Q Consensus 395 ~~v------~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~Gv~~~~~~~~~~~~-~~~~t~e~i~~~~~ 465 (476)
..+ -|.|.+-...+.. +.-...+......++.+.|++ ..|+.+. ....+.+ .-+..++|++.+++
T Consensus 383 ~~~~~~~~~~gggs~p~~~~~~-----~~v~~~~~~~~~~~l~~~lr~~~~~i~~r~-~~~~~~ld~r~~~~~~~~~~~~ 456 (464)
T PRK04311 383 VEVVPSFSQVGGGSLPVDRLPS-----AAVTLTPKDRSLEALAARLRLLPPPVIGRI-EDGRLLLDLRTLEEEDEERLAA 456 (464)
T ss_pred EEEEEccCccCCCCCcCCCCCe-----EEEEEeCCCCCHHHHHHHHhcCCCCEEEEE-ECCEEEEEeCcCCHHHHHHHHH
Confidence 111 1223332211100 000001111123566677765 3566653 2344555 45668899999999
Q ss_pred HHHHHHH
Q 011856 466 AAEKVKM 472 (476)
Q Consensus 466 ~l~~~~~ 472 (476)
+|.+++.
T Consensus 457 ~~~~~~~ 463 (464)
T PRK04311 457 ALLEALN 463 (464)
T ss_pred HHHHHhh
Confidence 9998764
No 313
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.60 E-value=7.4e-13 Score=132.32 Aligned_cols=310 Identities=17% Similarity=0.111 Sum_probs=180.5
Q ss_pred HHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchh
Q 011856 118 DQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADP 197 (476)
Q Consensus 118 p~v~~a~~~~l~~~~~~~~~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~ 197 (476)
++-.+++.+.+..+... ......+|.+.+++++ +.++.++++||++|+..+++.. ....++.||+....|++.. .
T Consensus 10 ~~~~~~v~~~~~~~~~~--~g~~~~~le~~la~~~-g~~~~v~~~sgt~al~~~l~al-~~~~Gd~Viv~~~~~~~~~-~ 84 (380)
T TIGR03588 10 QDDIDAVVEVLKSDFLT--QGPTVPAFEEALAEYV-GAKYAVAFNSATSALHIACLAL-GVGPGDRVWTTPITFVATA-N 84 (380)
T ss_pred HHHHHHHHHHHhcCCcc--CChhHHHHHHHHHHHH-CCCeEEEEcCHHHHHHHHHHHc-CCCCCCEEEeCCcchHHHH-H
Confidence 45577888888765322 2344567777788777 5567778889999999999842 1345677888887776643 3
Q ss_pred HHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCC-CCeEEEEEcccCCCCCcccCCHHHHHHHHHHH
Q 011856 198 FLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK-GEIAAIILEPVVGNSGFIAPKPDFLNAIRRIT 276 (476)
Q Consensus 198 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~-~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~ 276 (476)
.+...|..+...+.....+ ..|++++++.+++.+ +++++|++.. ..|...+ +++|.++|
T Consensus 85 ~~~~~G~~~~~~~~~~~~~-------------~~d~~~l~~~i~~~~~~~t~~v~~~~---~~G~~~~----~~~i~~l~ 144 (380)
T TIGR03588 85 CALYCGAKVDFVDIDPDTG-------------NIDEDALEKKLAAAKGKLPKAIVPVD---FAGKSVD----MQAIAALA 144 (380)
T ss_pred HHHHcCCEEEEEecCCCcC-------------CcCHHHHHHHhhcccCCCceEEEEeC---CCCccCC----HHHHHHHH
Confidence 3333444332221100000 127899999997421 2456666432 2566666 99999999
Q ss_pred HHhCCEEEEecccc-Cc-cccccchhhccCC--CCchhhhh----hhcCCCCcEEEEEe-cHHHHHhhcC---CCCc---
Q 011856 277 KENGALLIFDEVMT-GF-RLAYGGAQEYFGV--TPDLTTLG----KIIGGGLPVGAYGG-RRDIMEMVAP---AGPM--- 341 (476)
Q Consensus 277 ~~~g~llI~DEv~~-g~-r~g~~~~~~~~g~--~pDi~t~s----K~lg~G~~iG~~~~-~~~i~~~l~~---~~~~--- 341 (476)
++||++||+|++|+ |. ..+ ...|. .-|++++| |.++.| ..|+++. ++++.+.++. .+..
T Consensus 145 ~~~~~~lI~D~a~a~g~~~~~-----~~~g~~~~~d~~~~S~~~~K~~~~~-~GG~v~~~~~~~~~~~~~~~~~g~~~~~ 218 (380)
T TIGR03588 145 KKHGLKIIEDASHALGAEYGG-----KPVGNCRYADATVFSFHPVKIITTA-EGGAVTTNDEELAERMRLLRSHGITKDP 218 (380)
T ss_pred HHcCCEEEEECCCcccCccCC-----EeCCCccccceEEEecCCCCccccc-CceEEEECCHHHHHHHHHHHHCCCCCCc
Confidence 99999999999995 22 111 12232 23777654 888754 4666655 4666665431 0000
Q ss_pred -----------c-----ccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCce--Eeeeecee
Q 011856 342 -----------Y-----QAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAI--CGGYISGM 403 (476)
Q Consensus 342 -----------~-----~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~--~v~~~g~~ 403 (476)
. .+..+..+.+.++.+++.|+.+ ++..++-+++.+++.+.|..+..-..... .......+
T Consensus 219 ~~~~~~~~~~~~~~~~~~g~n~~m~~l~aa~g~~qL~~l--~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~ 296 (380)
T TIGR03588 219 LLFEKQDEGPWYYEQQELGFNYRMTDIQAALGLSQLKKL--DRFVAKRREIAARYDRLLKDLPYFTPLTIPLGSKSAWHL 296 (380)
T ss_pred ccccccccCcceeeeeccccccCccHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCEeEEEE
Confidence 0 0112334566666666666654 56677778888888888876421011100 00011122
Q ss_pred EEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCC-------------------------cceEEe--CCCc
Q 011856 404 FGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF-------------------------EAGFTS--LAHS 456 (476)
Q Consensus 404 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~-------------------------~~~~~~--~~~t 456 (476)
+.+.+... +....+++.+.|.++||.++.... ..+.++ ...|
T Consensus 297 ~~i~~~~~-----------~~~~r~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~ 365 (380)
T TIGR03588 297 YPILLDQE-----------FGCTRKEVFEALRAAGIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHPALT 365 (380)
T ss_pred EEEEECCc-----------CCCCHHHHHHHHHHCCCCcccCCcccccChhhhccCCcCCCcHHHHHHhceEEcCCCCCCC
Confidence 23333210 001236788889999987653210 112343 3468
Q ss_pred HHHHHHHHHHHHHHH
Q 011856 457 SDDIQHTITAAEKVK 471 (476)
Q Consensus 457 ~e~i~~~~~~l~~~~ 471 (476)
++|++.++++|++++
T Consensus 366 ~~dv~~i~~~l~~~~ 380 (380)
T TIGR03588 366 LEQQQRVVETLRKVL 380 (380)
T ss_pred HHHHHHHHHHHHHhC
Confidence 999999999998764
No 314
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.59 E-value=1.7e-13 Score=136.83 Aligned_cols=256 Identities=14% Similarity=0.076 Sum_probs=159.7
Q ss_pred CcHHHHHHHHHHHHhcCCCC-CCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCC
Q 011856 116 ADDQVLAALGETMKKGTSFG-APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGH 194 (476)
Q Consensus 116 ~~p~v~~a~~~~l~~~~~~~-~~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~ 194 (476)
.+.+-.+++.+.+..+..|+ ..++...+|++.++++. +.+.++.++||+.|+.+++... ...+++||+....|.+.
T Consensus 37 ~~~~~~~~~~~~~~~g~~ysR~~nPtv~~lE~~la~le-g~~~av~~~SG~aAi~~al~al--l~~GD~VI~~~~~Y~~T 113 (432)
T PRK06702 37 DTSDDLAALFNLEAEGYIYTRIGNPTLAAFEQKLAELE-GGVGAVATASGQAAIMLAVLNI--CSSGDHLLCSSTVYGGT 113 (432)
T ss_pred CCHHHHHHHHhccccCceeECCCCcHHHHHHHHHHHHh-CCCcEEEECCHHHHHHHHHHHh--cCCCCEEEECCCchHHH
Confidence 33444444444343332222 12566788999998888 5567899999999999999842 45678898888888774
Q ss_pred chhH---HhhcCCCCccCCCCCCCCCCCCCCCceeeccCC-CHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHH
Q 011856 195 ADPF---LVKAGSGVATLGLPDSPGVPKGATYETLTAPFN-DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLN 270 (476)
Q Consensus 195 ~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~ 270 (476)
.... +...|. ++..+..+ |+++++++++. ++++|++|...++.+.+.+ ++
T Consensus 114 ~~~~~~~l~~~Gi-------------------~v~~vd~~~d~~~l~~~I~~---~Tk~I~~e~pgnP~~~v~D----i~ 167 (432)
T PRK06702 114 FNLFGVSLRKLGI-------------------DVTFFNPNLTADEIVALAND---KTKLVYAESLGNPAMNVLN----FK 167 (432)
T ss_pred HHHHHHHHHHCCC-------------------EEEEECCCCCHHHHHHhCCc---CCeEEEEEcCCCccccccC----HH
Confidence 4332 111222 23344443 88999999974 6788999987777888888 99
Q ss_pred HHHHHHHHhCCEEEEeccccCccccccchhhccCCCCchh--hhhhhcCC-CCcEEEE-EecH----------HHHH---
Q 011856 271 AIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLT--TLGKIIGG-GLPVGAY-GGRR----------DIME--- 333 (476)
Q Consensus 271 ~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pDi~--t~sK~lg~-G~~iG~~-~~~~----------~i~~--- 333 (476)
+|.++|++||+++|+|+++. ....+..+..-.||+ +++|.++| +--+|++ +... ++.+
T Consensus 168 ~I~~iA~~~gi~livD~T~~-----tP~~~~pl~~GADIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~ 242 (432)
T PRK06702 168 EFSDAAKELEVPFIVDNTLA-----TPYLCQAFEHGANIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDP 242 (432)
T ss_pred HHHHHHHHcCCEEEEECCCC-----chhhCChhhcCCCEEEEccccccCCCcceeceEEEeCCCcccccccccccccccc
Confidence 99999999999999999984 122233333345665 79998885 3334433 3221 1110
Q ss_pred ------------------hhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhh----hc
Q 011856 334 ------------------MVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGK----KA 391 (476)
Q Consensus 334 ------------------~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~----~~ 391 (476)
.... ......+ .+.+|+.+..++..|+.+ +...++..++...+.+.|++... .+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g-~~~sp~~a~l~~rgL~Tl--~lR~~r~~~Na~~la~~L~~~p~V~~V~y 318 (432)
T PRK06702 243 SYHGVSYVQNFGAAAYIVKARV-QLLRDYG-NCMSPFNAYISNIGLETL--HLRMERHSENALAVAKWLADHERIEWVNY 318 (432)
T ss_pred cccccchhhccchhhHHHHHHH-HHHHHcc-CCCCHHHHHHHHhccCcH--HHHHHHHHHHHHHHHHHHHhCCCcceEEC
Confidence 0000 0011222 377888877777666533 45566667788888887776421 11
Q ss_pred C-Cce---------Ee-eeeceeEEEEEe
Q 011856 392 G-HAI---------CG-GYISGMFGFFFT 409 (476)
Q Consensus 392 ~-~~~---------~v-~~~g~~~~i~~~ 409 (476)
| +.. .. .|.|.|+.|++.
T Consensus 319 Pgl~~~p~~~l~~~~~~~g~gg~~sf~l~ 347 (432)
T PRK06702 319 PGLDSNENYSLAQKYLKKGASGVLTFGIK 347 (432)
T ss_pred CCCCCCccHHHHHHhCcCCCceEEEEEec
Confidence 1 111 12 357889999985
No 315
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.57 E-value=3.4e-13 Score=134.56 Aligned_cols=235 Identities=11% Similarity=0.063 Sum_probs=145.0
Q ss_pred CHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCC
Q 011856 138 CLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGV 217 (476)
Q Consensus 138 ~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~ 217 (476)
++...+|.++++++.+ .+..++++||+.|+..++. .+..+++|++.++.|++........... .|
T Consensus 53 ~p~~~~le~~lA~l~g-~~~~v~~~sG~~ai~~~l~---~l~~Gd~Vlv~~~~y~~~~~~~~~~~~~----------~G- 117 (390)
T PRK08064 53 NPTREALEDIIAELEG-GTKGFAFASGMAAISTAFL---LLSKGDHVLISEDVYGGTYRMITEVLSR----------FG- 117 (390)
T ss_pred ChhHHHHHHHHHHHhC-CCCeEEECCHHHHHHHHHH---HhCCCCEEEEccCccchHHHHHHHHHHH----------cC-
Confidence 4556778888888874 4456777889999988885 3456788999888887754322211000 01
Q ss_pred CCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccccc
Q 011856 218 PKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYG 297 (476)
Q Consensus 218 ~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~ 297 (476)
.++..++..|++++++.+++ ++++|++|.++|++|.+.+ +++|.++|+++|+++|+|++|..+.....
T Consensus 118 -----~~v~~v~~~d~~~l~~~l~~---~tklV~l~~p~NptG~~~d----l~~I~~la~~~g~~vvvD~a~~~~~~~~~ 185 (390)
T PRK08064 118 -----IEHTFVDMTNLEEVAQNIKP---NTKLFYVETPSNPLLKVTD----IRGVVKLAKAIGCLTFVDNTFLTPLLQKP 185 (390)
T ss_pred -----CEEEEECCCCHHHHHHhcCC---CceEEEEECCCCCCcEecc----HHHHHHHHHHcCCEEEEECCCCcccccCc
Confidence 13445555688999888864 5788999988888899988 99999999999999999999953311001
Q ss_pred chhhccCCCCchh--hhhhhcCC--CCcEEEEEe-cHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHHHH
Q 011856 298 GAQEYFGVTPDLT--TLGKIIGG--GLPVGAYGG-RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEY 372 (476)
Q Consensus 298 ~~~~~~g~~pDi~--t~sK~lg~--G~~iG~~~~-~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~ 372 (476)
. .+| .|++ +++|.++| |.-.|++++ ++++++.++. .........+|..+...+..++.+ +...++
T Consensus 186 --~-~~g--~Divv~S~tK~~~G~~~~laG~~v~~~~~~~~~l~~---~~~~~g~~~~~~~a~l~~~gl~tl--~~R~~~ 255 (390)
T PRK08064 186 --L-DLG--ADVVLHSATKFLAGHSDVLAGLAVVKDEELAQKLYF---LQNSFGAVLGVQDCWLVLRGLKTL--HVRLEH 255 (390)
T ss_pred --h-hhC--CcEEEeecceeccCCccceeEEEEeCCHHHHHHHHH---HHHhcCCCCCHHHHHHHHcccCcH--HHHHHH
Confidence 1 123 4665 67899974 344676655 4677777652 111112233444444332222211 334455
Q ss_pred HHHHHHHHHHHHHHHhh--h--cCC-c---------eEeeeeceeEEEEEe
Q 011856 373 LNKITGELTQGIIDAGK--K--AGH-A---------ICGGYISGMFGFFFT 409 (476)
Q Consensus 373 ~~~~~~~l~~~L~~~~~--~--~~~-~---------~~v~~~g~~~~i~~~ 409 (476)
..++...+.+.|++... + ++. . ....+.|.++.|++.
T Consensus 256 ~~~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~ 306 (390)
T PRK08064 256 SSETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQ 306 (390)
T ss_pred HHHHHHHHHHHHhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEEC
Confidence 56666666666665321 0 110 0 123467889999884
No 316
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.57 E-value=1.2e-12 Score=141.16 Aligned_cols=304 Identities=13% Similarity=0.153 Sum_probs=188.1
Q ss_pred HHHHHHHHHHHhhCCCCCeEEEeCCHH----HHHHHHHHHHHhccC--CceEEEEeCCCCCCchhHHhhcCCCCccCCCC
Q 011856 139 LLENVLAEMVISAVPSIEMVRFVNSGT----EACMGVLRLARAFTG--RERIIKFEGCYHGHADPFLVKAGSGVATLGLP 212 (476)
Q Consensus 139 ~~~~~la~~l~~~~~~~e~v~~~~sGs----eA~~~al~~ar~~~~--~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~ 212 (476)
+...++.+++++++ +.+.|.|+++++ +|+..+++......| ++++|+....-||.....+...|..+..++..
T Consensus 568 ~~~~~~r~~la~i~-g~~~v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~a~~~G~~vv~v~~d 646 (993)
T PLN02414 568 EMFEDLGDLLCEIT-GFDSFSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPASAAMCGMKIVVVGTD 646 (993)
T ss_pred HHHHHHHHHHHHHh-CCCeEEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHHHHHHCCCEEEEeccC
Confidence 44568888888888 679999998888 888888885422211 23467777788998776666655544332221
Q ss_pred CCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-C
Q 011856 213 DSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-G 291 (476)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~-g 291 (476)
..|. -|+++|+++++.+.+++++|++...++.+|...+ +++|.++|+++|+++++|-++. +
T Consensus 647 -~~G~-------------vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~----I~eI~~iah~~Galv~vDgAq~~a 708 (993)
T PLN02414 647 -AKGN-------------INIEELRKAAEAHKDNLAALMVTYPSTHGVYEEG----IDEICDIIHDNGGQVYMDGANMNA 708 (993)
T ss_pred -CCCC-------------cCHHHHHHHHhccCCCeEEEEEECCCccccccch----HHHHHHHHHHcCCEEEEEecCHHh
Confidence 1121 1899999999876567898888887778898888 9999999999999999999993 1
Q ss_pred ccccccchhhccCCCCchhhh--hhhcC-----CCCcEEEEEecHHHHHhhcCCC--C----c---c--ccCCCC----C
Q 011856 292 FRLAYGGAQEYFGVTPDLTTL--GKIIG-----GGLPVGAYGGRRDIMEMVAPAG--P----M---Y--QAGTLS----G 349 (476)
Q Consensus 292 ~r~g~~~~~~~~g~~pDi~t~--sK~lg-----~G~~iG~~~~~~~i~~~l~~~~--~----~---~--~~~t~~----~ 349 (476)
. .+.........|++++ .|.|+ ||-.+|.+.++++++..+-... . . . ..+|.. +
T Consensus 709 ~----~~l~~p~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~L~p~lPg~~v~~~~~~~~r~~~s~iGt~~~a~~g 784 (993)
T PLN02414 709 Q----VGLTSPGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVPTGGIPRPEKTQPLGTISAAPWG 784 (993)
T ss_pred c----cCcCCccccCCCEEEecCCccCCcCcccCCCCeeeEEEchhhcccCCCCccccCCCcccccCCCCcCCccchhhh
Confidence 1 0111111233577755 58776 2345899999988776553110 0 0 0 012322 3
Q ss_pred cHHHHHHHHHHHHHhcCCCH---HHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHH
Q 011856 350 NPLAMTAGIHTLKRLKEPGT---YEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTK 426 (476)
Q Consensus 350 ~~~~~aaa~aal~~~~~~~~---~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ 426 (476)
+.+.+.++...+..+..+.+ .++...+..|++++|.+. +++... ...|. +.-+|.-+- ..+. ......
T Consensus 785 ~al~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~~---~~~~~~-~~~~~-~~hEfv~~~-~~l~---~~~g~~ 855 (993)
T PLN02414 785 SALILPISYTYIAMMGSEGLTDASKIAILNANYMAKRLEGH---YPVLFR-GKNGT-CAHEFIIDL-RPFK---NTAGIE 855 (993)
T ss_pred hHHHHHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHhh---CCcccc-CCCCC-eeeeEEEec-cccc---cccCCC
Confidence 33455555555665554555 677778888999998763 222211 11121 111221100 0000 000011
Q ss_pred HHHHHHHHHHCCeEeccCC---CcceEE--eCCCcHHHHHHHHHHHHHHHHHh
Q 011856 427 FARFYRGMLEEGVYFAPSQ---FEAGFT--SLAHSSDDIQHTITAAEKVKMRF 474 (476)
Q Consensus 427 ~~~~~~~l~~~Gv~~~~~~---~~~~~~--~~~~t~e~i~~~~~~l~~~~~~~ 474 (476)
...+.+.|++.|+...... .+.+++ .-..+++|||+++++|..+..+.
T Consensus 856 ~~di~krL~d~Gihapt~~~pv~~~lmiepTE~~skeelDrf~~al~~i~~e~ 908 (993)
T PLN02414 856 PEDVAKRLMDYGFHAPTMSWPVPGTLMIEPTESESKAELDRFCDALISIREEI 908 (993)
T ss_pred HHHHHHHHHHcCcEEeeeccccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHH
Confidence 2568888999998754322 234455 45679999999999998887654
No 317
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.57 E-value=5e-13 Score=132.63 Aligned_cols=236 Identities=17% Similarity=0.112 Sum_probs=146.9
Q ss_pred CCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCC
Q 011856 136 APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSP 215 (476)
Q Consensus 136 ~~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~ 215 (476)
+.++...+|.+.++++. +.+..++++||+.|+..++. ....+++||+.++.|.+.+........ ..
T Consensus 47 ~~~p~~~~Le~~lA~l~-g~~~~~~~~sG~aai~~~~~---~l~~Gd~Viv~~~~y~~~~~~~~~~~~----------~~ 112 (377)
T PRK07671 47 TGNPTRAALEELIAVLE-GGHAGFAFGSGMAAITAVMM---LFSSGDHVILTDDVYGGTYRVMTKVLN----------RF 112 (377)
T ss_pred CCChHHHHHHHHHHHHh-CCCceEEeCCHHHHHHHHHH---HhCCCCEEEECCCccchHHHHHHHHHh----------cC
Confidence 35666788888888887 45667788889998877654 345578899888888765432221110 00
Q ss_pred CCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccc
Q 011856 216 GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLA 295 (476)
Q Consensus 216 ~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g 295 (476)
| .++..++..|++++++.++. ++++|++|..+|+.|.+.+ +++|.++|+++|+++|+||+|......
T Consensus 113 G------~~v~~v~~~d~~~l~~ai~~---~tklV~le~P~NPtg~~~d----l~~I~~la~~~g~~lvvD~a~~~~~~~ 179 (377)
T PRK07671 113 G------IEHTFVDTSNLEEVEEAIRP---NTKAIYVETPTNPLLKITD----IKKISTIAKEKGLLTIVDNTFMTPYWQ 179 (377)
T ss_pred C------eEEEEECCCCHHHHHHhcCC---CCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEEEECCCCccccC
Confidence 1 12444555689999998863 5788888877777888877 999999999999999999999532111
Q ss_pred ccchhhccCCCCchh--hhhhhcCC-C-CcEEEEEe-cHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHH
Q 011856 296 YGGAQEYFGVTPDLT--TLGKIIGG-G-LPVGAYGG-RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTY 370 (476)
Q Consensus 296 ~~~~~~~~g~~pDi~--t~sK~lg~-G-~~iG~~~~-~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~ 370 (476)
. ......|++ +++|.++| + .-.|++++ ++++++.+.. .........+|..+..++..++.+ ...+
T Consensus 180 ~-----p~~~g~Divv~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~~---~~~~~g~~~~~~~a~l~~~~l~tl--~~R~ 249 (377)
T PRK07671 180 S-----PISLGADIVLHSATKYLGGHSDVVAGLVVVNSPELAEDLHF---VQNSTGGILGPQDSWLLLRGLKTL--GIRM 249 (377)
T ss_pred C-----hhhhCCeEEEecCcccccCCccceeEEEEeCcHHHHHHHHH---HHHhhcCCCCHHHHHHHHcCcChH--HHHH
Confidence 1 112234665 68899984 2 33555555 5667776652 111112234565555544444332 3345
Q ss_pred HHHHHHHHHHHHHHHHHhh----hcCC-c---------eEeeeeceeEEEEE
Q 011856 371 EYLNKITGELTQGIIDAGK----KAGH-A---------ICGGYISGMFGFFF 408 (476)
Q Consensus 371 ~~~~~~~~~l~~~L~~~~~----~~~~-~---------~~v~~~g~~~~i~~ 408 (476)
++..++...+.+.|++... .+|. . ....+.|.++.|++
T Consensus 250 ~~~~~na~~la~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~ 301 (377)
T PRK07671 250 EEHETNSRAIAEFLNNHPAVNKVYYPGLPSHPNHELAKEQANGFGGMISFDV 301 (377)
T ss_pred HHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEe
Confidence 5666677777776665310 0110 0 01346788999988
No 318
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.56 E-value=2.9e-13 Score=134.36 Aligned_cols=168 Identities=17% Similarity=0.155 Sum_probs=114.5
Q ss_pred CCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCC
Q 011856 137 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPG 216 (476)
Q Consensus 137 ~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~ 216 (476)
.++...+|.++++++. +.+..++++||+.|+.+++. .+..+++||+.++.|++.......... ..+
T Consensus 48 ~~p~~~~Le~~la~l~-g~~~al~~~SG~~Al~~~l~---~l~pGd~Vi~~~~~y~~t~~~~~~~~~----------~~g 113 (380)
T PRK06176 48 GNPTRFALEELIADLE-GGVKGFAFASGLAGIHAVFS---LFQSGDHVLLGDDVYGGTFRLFDKVLV----------KNG 113 (380)
T ss_pred CChhHHHHHHHHHHHh-CCCCEEEECCHHHHHHHHHH---HcCCCCEEEEcCCChhHHHHHHHHHHH----------hcC
Confidence 4556678888888887 45677888999999987665 345678888888888664322211100 011
Q ss_pred CCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCccccc
Q 011856 217 VPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY 296 (476)
Q Consensus 217 ~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~ 296 (476)
.++..++..|++++++.++. ++++|++|.+.|+.|.+.+ +++|.++|++||+++|+|++|.......
T Consensus 114 ------i~v~~vd~~d~e~l~~ai~~---~t~lV~lesP~Nptg~~~d----i~~I~~la~~~gi~vivD~t~a~~~~~~ 180 (380)
T PRK06176 114 ------LSCTIIDTSDLSQIKKAIKP---NTKALYLETPSNPLLKITD----LAQCASVAKDHGLLTIVDNTFATPYYQN 180 (380)
T ss_pred ------eEEEEcCCCCHHHHHHhcCc---CceEEEEECCCCCCceecC----HHHHHHHHHHcCCEEEEECCccccccCC
Confidence 12344455589999988863 6788898888888888888 9999999999999999999995321111
Q ss_pred cchhhccCCCCchh--hhhhhcCC-C-CcEEEEEec-HHHHHhhc
Q 011856 297 GGAQEYFGVTPDLT--TLGKIIGG-G-LPVGAYGGR-RDIMEMVA 336 (476)
Q Consensus 297 ~~~~~~~g~~pDi~--t~sK~lg~-G-~~iG~~~~~-~~i~~~l~ 336 (476)
..+...|++ +++|.+++ | .-.|+++++ +++.+.++
T Consensus 181 -----p~~~gaDivv~S~tK~l~g~~d~~gG~vv~~~~~~~~~~~ 220 (380)
T PRK06176 181 -----PLLLGADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQEIA 220 (380)
T ss_pred -----ccccCCCEEEecCceeccCCccceeeEEEecHHHHHHHHH
Confidence 123345766 57799985 4 345556664 55656554
No 319
>PRK05939 hypothetical protein; Provisional
Probab=99.56 E-value=1e-12 Score=130.98 Aligned_cols=159 Identities=18% Similarity=0.197 Sum_probs=112.4
Q ss_pred CCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCC
Q 011856 137 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPG 216 (476)
Q Consensus 137 ~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~ 216 (476)
.++...+|.+.++++. +.+..+.++||+.|+..++... ...+++||+.+..|.+........... |
T Consensus 45 g~p~~~~lE~~la~le-g~~~~v~~ssG~~Ai~~~l~al--l~~Gd~Vv~~~~~y~~t~~~~~~l~~~-----------G 110 (397)
T PRK05939 45 GTPTTAALEAKITKME-GGVGTVCFATGMAAIAAVFLTL--LRAGDHLVSSQFLFGNTNSLFGTLRGL-----------G 110 (397)
T ss_pred CCHHHHHHHHHHHHHh-CCCeEEEeCCHHHHHHHHHHHH--cCCCCEEEECCCccccHHHHHHHHHhc-----------C
Confidence 3566778888888887 5556778888999999998742 345677888776665532211111111 1
Q ss_pred CCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-Ccccc
Q 011856 217 VPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GFRLA 295 (476)
Q Consensus 217 ~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~r~g 295 (476)
.++..++..|++++++.++. ++++|++|.++|++|.+.+ +++|.++|+++|+++|+|++|. +..
T Consensus 111 ------~~v~~v~~~d~e~l~~~l~~---~tklV~vesp~NptG~v~d----l~~I~~la~~~gi~livD~t~a~~~~-- 175 (397)
T PRK05939 111 ------VEVTMVDATDVQNVAAAIRP---NTRMVFVETIANPGTQVAD----LAGIGALCRERGLLYVVDNTMTSPWL-- 175 (397)
T ss_pred ------CEEEEECCCCHHHHHHhCCC---CCeEEEEECCCCCCCCHHh----HHHHHHHHHHcCCEEEEECCcccccc--
Confidence 13455555689999999863 6889999998888998877 9999999999999999999984 321
Q ss_pred ccchhhccCCCCchh--hhhhhcCC-CCcEEEEEec
Q 011856 296 YGGAQEYFGVTPDLT--TLGKIIGG-GLPVGAYGGR 328 (476)
Q Consensus 296 ~~~~~~~~g~~pDi~--t~sK~lg~-G~~iG~~~~~ 328 (476)
+.......|++ +++|.+++ |..+|+++..
T Consensus 176 ----~~~~~~gaDivv~S~sK~~~g~g~~igg~v~~ 207 (397)
T PRK05939 176 ----FRPKDVGASLVINSLSKYIAGHGNALGGAVTD 207 (397)
T ss_pred ----cCccccCCEEEEecCeecccCCCCeEEEEEec
Confidence 11112234655 78999996 7888888664
No 320
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.55 E-value=9.8e-13 Score=129.91 Aligned_cols=237 Identities=13% Similarity=0.051 Sum_probs=155.3
Q ss_pred CCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCC
Q 011856 137 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPG 216 (476)
Q Consensus 137 ~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~ 216 (476)
.++....|+++++++- +.+.+++++||+.|+.+++.. .+..+++|++....|.+....+-.... ..|
T Consensus 60 ~nPt~~~le~~la~LE-g~~~a~~~~SGmaAi~~~~~~--ll~~GD~Vv~~~~~Yg~t~~l~~~~l~----------~~G 126 (395)
T PRK08114 60 GTLTHFSLQEAMCELE-GGAGCALYPCGAAAVANAILA--FVEQGDHVLMTGTAYEPTQDFCSKILS----------KLG 126 (395)
T ss_pred CChhHHHHHHHHHHHh-CCCeEEEEhHHHHHHHHHHHH--HcCCCCEEEEeCCCcHHHHHHHHHHHH----------hcC
Confidence 3566678888888876 667889999999999998873 245567787777677665433211000 011
Q ss_pred CCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhC--CEEEEeccccCccc
Q 011856 217 VPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENG--ALLIFDEVMTGFRL 294 (476)
Q Consensus 217 ~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g--~llI~DEv~~g~r~ 294 (476)
+ ++..++..|.+++++.++. ++++|++|.+.|+.|.+.+ +++|.++|+++| +++|+|.+++ +
T Consensus 127 i------~v~~vd~~d~~~l~~~l~~---~TrlV~~EtpsNp~~~v~D----I~~Ia~ia~~~g~g~~lvVDnT~a---~ 190 (395)
T PRK08114 127 V------TTTWFDPLIGADIAKLIQP---NTKVVFLESPGSITMEVHD----VPAIVAAVRSVNPDAVIMIDNTWA---A 190 (395)
T ss_pred c------EEEEECCCCHHHHHHhcCC---CceEEEEECCCCCCCEeec----HHHHHHHHHHhCCCCEEEEECCCc---c
Confidence 1 3555666689999999964 6899999999999999999 999999999985 9999999994 1
Q ss_pred cccchhhccCCCCchh--hhhhhcCC-C-CcEEEEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHH
Q 011856 295 AYGGAQEYFGVTPDLT--TLGKIIGG-G-LPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTY 370 (476)
Q Consensus 295 g~~~~~~~~g~~pDi~--t~sK~lg~-G-~~iG~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~ 370 (476)
+.. +.......|++ +..|.++| | .-.|.++.++++.+.+... ....+. ..+|..+...+..|+-+ +-.+
T Consensus 191 p~~--~~pl~~GaDivv~S~tKyl~Ghsdv~~G~v~~~~~~~~~l~~~--~~~~G~-~~~p~~a~l~~rgl~TL--~lR~ 263 (395)
T PRK08114 191 GVL--FKALDFGIDISIQAGTKYLVGHSDAMIGTAVANARCWEQLREN--SYLMGQ-MVDADTAYMTSRGLRTL--GVRL 263 (395)
T ss_pred ccc--cCHHHcCCcEEEEcCcccccCCCcceeEEEEcCHHHHHHHHHH--HHhccC-CCCHHHHHHHHcCCCcH--HHHH
Confidence 111 33333346776 57799986 3 6677777788776655421 111122 44666655544444322 3345
Q ss_pred HHHHHHHHHHHHHHHHHhh----hcC-Cc---------eEeeeeceeEEEEEe
Q 011856 371 EYLNKITGELTQGIIDAGK----KAG-HA---------ICGGYISGMFGFFFT 409 (476)
Q Consensus 371 ~~~~~~~~~l~~~L~~~~~----~~~-~~---------~~v~~~g~~~~i~~~ 409 (476)
++..++...+.+.|++... .|| ++ ....+.|.|+.|++.
T Consensus 264 ~~~~~na~~va~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~g~gg~~sf~l~ 316 (395)
T PRK08114 264 RQHEESSLKVAEWLAEHPEVARVNHPALPGCKGHEFWKRDFTGSSGLFSFVLK 316 (395)
T ss_pred HHHHHHHHHHHHHHHcCCCEeEEECCCCCCCccHHHHHhhCCCCceEEEEEec
Confidence 6666777777777765321 011 00 113467889999985
No 321
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.54 E-value=4e-12 Score=127.87 Aligned_cols=310 Identities=15% Similarity=0.146 Sum_probs=175.1
Q ss_pred CcHHHHHHHHHHHHhcCC--C----CCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeC
Q 011856 116 ADDQVLAALGETMKKGTS--F----GAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEG 189 (476)
Q Consensus 116 ~~p~v~~a~~~~l~~~~~--~----~~~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~ 189 (476)
-++++.+++.+.+..... + +........+.+.+++++ +.+..++++||+.|+..++. .+..+++||+.++
T Consensus 93 l~~~vieAv~~~~~~y~~l~~~l~~g~~g~r~~~le~~lA~l~-gae~alvv~sg~aAi~l~l~---~l~~GdeVIvs~~ 168 (454)
T TIGR00474 93 LAEEAIEAVTDAARGYSNLEYDLETGKRGSRYSHVEGLLCELT-GAEDALVVNNNAAAVLLALN---TLAKGKEVIVSRG 168 (454)
T ss_pred CCHHHHHHHHHHHhcccchhccccccccchHHHHHHHHHHHHh-CCCcEEEECCHHHHHHHHHH---HhCCcCEEEECCC
Confidence 479999999998876321 1 112234467788888887 56677889999999998886 4567788888766
Q ss_pred CC---CCCch--hHHhhcCCCCccCCCCCCCCCCCCCCCceeeccC---CCHHHHHHHHhcCCCCeEEEEEcccCCC--C
Q 011856 190 CY---HGHAD--PFLVKAGSGVATLGLPDSPGVPKGATYETLTAPF---NDVSALENLFENNKGEIAAIILEPVVGN--S 259 (476)
Q Consensus 190 ~y---hg~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~d~~~le~~l~~~~~~~a~vi~ep~~~~--~ 259 (476)
.+ .|... ..+...|. .+..+++ .+++++++.++. ++++|+++...+. .
T Consensus 169 e~v~~ggs~~i~~~~~~~G~-------------------~~~~v~~~~~~~l~dle~aI~~---~T~lv~~~h~sN~~~~ 226 (454)
T TIGR00474 169 ELVEIGGSFRIPDVMEQSGA-------------------KLVEVGTTNRTHLKDYEDAITE---NTALLLKVHTSNYRIV 226 (454)
T ss_pred hhhhhcchhhHHHHHHHcCC-------------------EEEEeCCCCCCCHHHHHHhcCc---CCEEEEEEccCccccc
Confidence 53 23211 11222222 2333333 368889988863 5777777665432 4
Q ss_pred C--cccCCHHHHHHHHHHHHHhCCEEEEeccccCc--cccc------cchhhccCCCCchhhhh--hhcCCCCcEEEEEe
Q 011856 260 G--FIAPKPDFLNAIRRITKENGALLIFDEVMTGF--RLAY------GGAQEYFGVTPDLTTLG--KIIGGGLPVGAYGG 327 (476)
Q Consensus 260 G--~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~--r~g~------~~~~~~~g~~pDi~t~s--K~lg~G~~iG~~~~ 327 (476)
| .+.+ +++|.++|++||+++|+|... |. ..+. ...++......|++++| |.++|. ..|++++
T Consensus 227 G~~~~~d----l~~I~~la~~~g~~vivD~~s-G~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp-~~G~i~g 300 (454)
T TIGR00474 227 GFTEEVS----IAELVALGREHGLPVMEDLGS-GSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGGP-QAGIIVG 300 (454)
T ss_pred CCCCCCC----HHHHHHHHHHcCCeEEEECCC-cccccchhccCCCCcccccHhHcCCCEEEecCccccCCC-eEEEEEE
Confidence 5 3667 999999999999999999642 22 1111 11112223356899888 999763 3788899
Q ss_pred cHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC--C------------CHHHHHHHHHHHHHHHHHHHhhhcCC
Q 011856 328 RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--P------------GTYEYLNKITGELTQGIIDAGKKAGH 393 (476)
Q Consensus 328 ~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~------------~~~~~~~~~~~~l~~~L~~~~~~~~~ 393 (476)
++++++.+.+. ++ .-.+-..-+..++..+++..+-+ + --.++..++...+.+.|++... .++
T Consensus 301 ~~~~i~~l~~~-~l--~r~lr~~k~~la~l~~~l~~~~~~~~a~~~~~~l~~l~~~~~~~~~~A~~la~~L~~~~~-~~~ 376 (454)
T TIGR00474 301 KKELIERLKKN-PL--TRALRVDKLTLAALEATLRLYLDPEKALEKIPTLRMLTQSPEELRARAERLAKRLKAALG-PGF 376 (454)
T ss_pred CHHHHHhhhhc-hh--HHHHhhChHHHHHHHHHHHHHhCchhhhhhchHHHHhccCHHHHHHHHHHHHHHHHhhcc-CCc
Confidence 99988876531 11 11112223334444455543322 1 1123666677777777776421 111
Q ss_pred ceEe------eeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCC--eEeccCCCcceEE-eCCCcHHHHHHHH
Q 011856 394 AICG------GYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEG--VYFAPSQFEAGFT-SLAHSSDDIQHTI 464 (476)
Q Consensus 394 ~~~v------~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G--v~~~~~~~~~~~~-~~~~t~e~i~~~~ 464 (476)
...+ -|.|.|-...+.. +.-...+......++.+.|++.. |+.+. ....+.+ .-+..++|++.++
T Consensus 377 ~~~~~~~~~~~ggg~~p~~~l~~-----~~v~~~~~~~~~~~l~~~lr~~~~~ii~r~-~~~~~~ld~r~~~~~~~~~~~ 450 (454)
T TIGR00474 377 ELEIVPGLSQVGGGSLPDERLPS-----YAVTLTPDGLSAEKLEARLRELPPPIIGRI-EDDRFLLDLRTLLEDEEELLI 450 (454)
T ss_pred eEEEEEcCCcccCCCCcCCCCCe-----EEEEEecCCCCHHHHHHHHhcCCCCEEEEE-ECCEEEEEeCcCCHHHHHHHH
Confidence 1111 1233332221110 00000111112356667776543 55542 2334555 4566788888888
Q ss_pred HHH
Q 011856 465 TAA 467 (476)
Q Consensus 465 ~~l 467 (476)
++|
T Consensus 451 ~~~ 453 (454)
T TIGR00474 451 EAL 453 (454)
T ss_pred HHh
Confidence 765
No 322
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.54 E-value=4.3e-13 Score=132.18 Aligned_cols=233 Identities=18% Similarity=0.163 Sum_probs=148.2
Q ss_pred CCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhh-cCCCCccCCCCCCC
Q 011856 137 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVK-AGSGVATLGLPDSP 215 (476)
Q Consensus 137 ~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~-~g~~~~~~~~~~~~ 215 (476)
.++....|.+.|+++. +.+.++.++||..|+..++.. ....+++|+.....|++....+-.. ...
T Consensus 53 gnPt~~~le~~la~Le-~g~~a~~~~SGmaAi~~~l~~--ll~~Gd~iv~~~~~Y~~t~~~~~~~l~~~----------- 118 (386)
T PF01053_consen 53 GNPTVRALEQRLAALE-GGEDALLFSSGMAAISAALLA--LLKPGDHIVASDDLYGGTYRLLEELLPRF----------- 118 (386)
T ss_dssp C-HHHHHHHHHHHHHH-T-SEEEEESSHHHHHHHHHHH--HS-TTBEEEEESSSSHHHHHHHHHCHHHT-----------
T ss_pred ccccHHHHHHHHHHhh-cccceeeccchHHHHHHHHHh--hcccCCceEecCCccCcchhhhhhhhccc-----------
Confidence 4677788888888877 568899999999999998874 2345788888888888743322211 111
Q ss_pred CCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhC-CEEEEeccccCccc
Q 011856 216 GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENG-ALLIFDEVMTGFRL 294 (476)
Q Consensus 216 ~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g-~llI~DEv~~g~r~ 294 (476)
+ .++..++..|++++++.++. ++++|++|++.|+...+.+ +++|+++|+++| +++|+|.+...
T Consensus 119 g------v~v~~~d~~d~~~l~~~l~~---~t~~v~~EspsNP~l~v~D----l~~i~~~a~~~g~~~~vVDnT~at--- 182 (386)
T PF01053_consen 119 G------VEVTFVDPTDLEALEAALRP---NTKLVFLESPSNPTLEVPD----LEAIAKLAKEHGDILVVVDNTFAT--- 182 (386)
T ss_dssp T------SEEEEESTTSHHHHHHHHCT---TEEEEEEESSBTTTTB-------HHHHHHHHHHTTT-EEEEECTTTH---
T ss_pred C------cEEEEeCchhHHHHHhhccc---cceEEEEEcCCCccccccc----HHHHHHHHHHhCCceEEeeccccc---
Confidence 1 13556666789999999985 7999999999888888888 999999999998 99999999841
Q ss_pred cccchhhccCCCCchh--hhhhhcCC-C-CcEEEEEecH--HHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCC
Q 011856 295 AYGGAQEYFGVTPDLT--TLGKIIGG-G-LPVGAYGGRR--DIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPG 368 (476)
Q Consensus 295 g~~~~~~~~g~~pDi~--t~sK~lg~-G-~~iG~~~~~~--~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~ 368 (476)
...+..+....|++ +++|.++| | .-.|.++++. ++++.++.. ....+. ..+|..+...+..|+-+ +-
T Consensus 183 --p~~~~pL~~GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~--~~~~G~-~~~p~da~ll~rgl~Tl--~~ 255 (386)
T PF01053_consen 183 --PYNQNPLELGADIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLREF--RRLLGA-TLSPFDAWLLLRGLRTL--PL 255 (386)
T ss_dssp --TTTC-GGGGT-SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHH--HHHHT--B--HHHHHHHHHHHTTH--HH
T ss_pred --eeeeccCcCCceEEEeeccccccCCcceeeEEEEECchhhhhhhhcch--hhhcCc-cchHHHHHHHhcCCCcH--HH
Confidence 11222223335766 68899985 3 4577777654 677665421 111111 33455544444443322 34
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCceE------------------eeeeceeEEEEEec
Q 011856 369 TYEYLNKITGELTQGIIDAGKKAGHAIC------------------GGYISGMFGFFFTE 410 (476)
Q Consensus 369 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~------------------v~~~g~~~~i~~~~ 410 (476)
..++..++...+.+.|++. +.+.. ..+.|.++.|++.+
T Consensus 256 R~~~~~~nA~~lA~~L~~h----p~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~ 311 (386)
T PF01053_consen 256 RMERQNENAEALAEFLEEH----PKVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKG 311 (386)
T ss_dssp HHHHHHHHHHHHHHHHHTS----TTEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESS
T ss_pred HHHHHHHHHHHHHHHHHhC----CCCCeEEEcccccccceeeeeecccccCceeEEEecc
Confidence 4566667777777776653 33222 23667799999964
No 323
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.54 E-value=1.1e-12 Score=131.87 Aligned_cols=157 Identities=15% Similarity=0.160 Sum_probs=107.8
Q ss_pred CHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHh-hcCCCCccCCCCCCCC
Q 011856 138 CLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLV-KAGSGVATLGLPDSPG 216 (476)
Q Consensus 138 ~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~-~~g~~~~~~~~~~~~~ 216 (476)
++...+|.+.++++. +.+..++++||+.|+..++... ...++.||+....|.+....... .... +
T Consensus 68 ~p~~~~Le~~lA~l~-g~~~av~~sSG~aAi~~al~al--l~~Gd~Vv~~~~~y~~t~~~~~~~l~~~-----------G 133 (436)
T PRK07812 68 NPTQDVVEQRIAALE-GGVAALLLASGQAAETFAILNL--AGAGDHIVSSPRLYGGTYNLFHYTLPKL-----------G 133 (436)
T ss_pred CchHHHHHHHHHHHh-CCCeEEEEccHHHHHHHHHHHH--hCCCCEEEEeCCcchHHHHHHHHHhhcC-----------e
Confidence 455678888888887 5677899999999999999732 34567777776666553322111 0111 1
Q ss_pred CCCCCCCceeecc-CCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-Cccc
Q 011856 217 VPKGATYETLTAP-FNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GFRL 294 (476)
Q Consensus 217 ~~~~~~~~~~~~~-~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~r~ 294 (476)
..+..++ ..|++++++.++. ++++|++|.+.|+.|.+.+ +++|.++|++||+++|+|+++. +..
T Consensus 134 ------i~v~~vdd~~d~e~l~~ai~~---~tklV~ie~~sNp~G~v~D----l~~I~~la~~~gi~liVD~t~a~~~~- 199 (436)
T PRK07812 134 ------IEVSFVEDPDDLDAWRAAVRP---NTKAFFAETISNPQIDVLD----IPGVAEVAHEAGVPLIVDNTIATPYL- 199 (436)
T ss_pred ------EEEEEECCCCCHHHHHHhCCC---CCeEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEECCCccccc-
Confidence 1233332 3478888888863 6789999999999999999 9999999999999999999984 221
Q ss_pred cccchhhccCCCCchh--hhhhhcCC-CCcEEEEEe
Q 011856 295 AYGGAQEYFGVTPDLT--TLGKIIGG-GLPVGAYGG 327 (476)
Q Consensus 295 g~~~~~~~~g~~pDi~--t~sK~lg~-G~~iG~~~~ 327 (476)
........|++ +++|.++| |--+|+++.
T Consensus 200 -----~~pl~~GaDivv~S~tK~lgg~G~~i~G~vv 230 (436)
T PRK07812 200 -----IRPLEHGADIVVHSATKYLGGHGTAIAGVIV 230 (436)
T ss_pred -----CCchhcCCCEEEEecccccCCCCCeEEEEEE
Confidence 11122235765 68899984 433555544
No 324
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.53 E-value=2e-12 Score=128.86 Aligned_cols=309 Identities=13% Similarity=-0.021 Sum_probs=173.0
Q ss_pred cHH-HHHHHHHHHHhcCCCC-CCCHHHHHHHHHHHhhCCC--CCeEEEeC-CHHHHHHHHHHHHHhccCCceEEEEeCCC
Q 011856 117 DDQ-VLAALGETMKKGTSFG-APCLLENVLAEMVISAVPS--IEMVRFVN-SGTEACMGVLRLARAFTGRERIIKFEGCY 191 (476)
Q Consensus 117 ~p~-v~~a~~~~l~~~~~~~-~~~~~~~~la~~l~~~~~~--~e~v~~~~-sGseA~~~al~~ar~~~~~~~ii~~~~~y 191 (476)
+|+ |.+|+.+.+....+.+ ...+...+..+.+++++.. .++|+|+. |||++++.++... ..+++.+++.. +.
T Consensus 24 ~~~~v~~a~~~~~~~~~hr~~~f~~~~~~~r~~l~~l~~~~~~~~v~~~~gs~T~~~~~~~~~l--~~~~~~~vi~~-g~ 100 (378)
T PRK03080 24 RPGWQLEALADALLGRSHRQKPVKALLKRVIEGTRELLSLPEGYEVGIVPGSDTGAWEMALWSL--LGARRVDHLAW-ES 100 (378)
T ss_pred ChHHHHHHHHhhhcccCcCCHHHHHHHHHHHHHHHHHhCCCCCceEEEECCchHHHHHHHHHhc--CCCCcceEEEe-CH
Confidence 566 8888875543211211 1234556777778777752 34788885 9999999999842 22223344433 56
Q ss_pred CCCchhH-H-hhcCC-CCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHH
Q 011856 192 HGHADPF-L-VKAGS-GVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDF 268 (476)
Q Consensus 192 hg~~~~~-~-~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~ 268 (476)
|+..... + ...|. .+..+..+ ++. .-|++++ +. ++.|.+..+.+.+|.+.|
T Consensus 101 f~~~~~~~~~~~~g~~~v~~~~~~--~g~------------~~d~~~i----~~----~~~V~~~h~~t~tG~~~p---- 154 (378)
T PRK03080 101 FGSKWATDVVKQLKLEDPRVLEAD--YGS------------LPDLSAV----DF----DRDVVFTWNGTTTGVRVP---- 154 (378)
T ss_pred HHHHHHHHHHhhcCCCCceEeccC--CCC------------CCCHhhc----CC----CCCEEEEecCCccceecc----
Confidence 6653222 1 11232 22221111 110 0144442 21 334677777778899999
Q ss_pred HHHHHHHHHHhCCEEEEecccc-CccccccchhhccCCCCchhhh--hhhcCCCCcEEEEEecHHHHHhhcCCCC-----
Q 011856 269 LNAIRRITKENGALLIFDEVMT-GFRLAYGGAQEYFGVTPDLTTL--GKIIGGGLPVGAYGGRRDIMEMVAPAGP----- 340 (476)
Q Consensus 269 l~~l~~l~~~~g~llI~DEv~~-g~r~g~~~~~~~~g~~pDi~t~--sK~lg~G~~iG~~~~~~~i~~~l~~~~~----- 340 (476)
+++|.+ ++||+++|+|-+|+ |.. ..-.+ + .|++++ -|.|++...+|++..+++.++.+.+...
T Consensus 155 i~~I~~--~~~g~~~vVDa~qs~G~~---pidv~--~--iD~~~~s~~K~l~~P~G~g~l~v~~~~~~~~~p~~~~~~~~ 225 (378)
T PRK03080 155 VARWIG--ADREGLTICDATSAAFAL---PLDWS--K--LDVYTFSWQKVLGGEGGHGMAILSPRAVERLESYTPARPIP 225 (378)
T ss_pred chhhcc--ccCCCeEEEecccccccC---CCCHH--H--CcEEEEehhhhCCCCCceEEEEECHHHHHhhhcccCCCCCc
Confidence 888888 78999999999995 210 11111 1 377654 4998754459999999999887654210
Q ss_pred --------------ccccCCCCC-cHHHHHHHHHHHHHhcCC----CHHHHHHHHHHHHHHHHHHHhhhcCCceEeee-e
Q 011856 341 --------------MYQAGTLSG-NPLAMTAGIHTLKRLKEP----GTYEYLNKITGELTQGIIDAGKKAGHAICGGY-I 400 (476)
Q Consensus 341 --------------~~~~~t~~~-~~~~~aaa~aal~~~~~~----~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~-~ 400 (476)
.+..+|.+. +..+..+..++|+.+.+. ...++.+++.+++++.|+++..-......-.. .
T Consensus 226 ~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s 305 (378)
T PRK03080 226 KFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAANASVLYDWAEKTPWATPLVADPATRS 305 (378)
T ss_pred hhheeccchHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccC
Confidence 011223332 334445556778877653 33455566666676666654210011000011 1
Q ss_pred ceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCC----CcceEEe--CCCcHHHHHHHHHHHHHHHHHh
Q 011856 401 SGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ----FEAGFTS--LAHSSDDIQHTITAAEKVKMRF 474 (476)
Q Consensus 401 g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~----~~~~~~~--~~~t~e~i~~~~~~l~~~~~~~ 474 (476)
+.++.+.+.+ .+.....++...++++|+++..++ ...+|++ ..+|++|++.++++|+++++++
T Consensus 306 ~~i~~~~~~~-----------~~~~~~~~~~~~l~~~~i~v~~g~~~~~~~~vRis~~~~~t~~di~~l~~al~~~~~~~ 374 (378)
T PRK03080 306 NTSVTLDFVD-----------AQAAVDAAAVAKLLRENGAVDIEPYRDAPNGLRIWCGPTVEPADVEALTPWLDWAFERL 374 (378)
T ss_pred ccEEEEEcCC-----------chHHHHHHHHHHHHHcCCeeccccccCCCCcEEEecCCCCCHHHHHHHHHHHHHHHHHH
Confidence 2344444321 000111345666777888876543 2457775 5679999999999999988754
No 325
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.52 E-value=3.5e-12 Score=125.58 Aligned_cols=343 Identities=14% Similarity=0.068 Sum_probs=182.1
Q ss_pred CCEEEecccChhhccCCCCcHHHHHH-HHHHHHhcCCCCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHH
Q 011856 98 GNEYIDYVGSWGPAIIGHADDQVLAA-LGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLAR 176 (476)
Q Consensus 98 G~~~iD~~~~~~~~~lG~~~p~v~~a-~~~~l~~~~~~~~~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar 176 (476)
...|||+.+-.++ +.+.++ +...+.-...|+ -++...+|.+.+++++ +.+.+++++||+.|...+..
T Consensus 37 ~~v~iDLltDsgT-------~aMs~~q~a~~~~GDe~ya-g~~s~~~lE~~va~~~-G~~~av~v~sGT~Al~ll~~--- 104 (450)
T TIGR02618 37 EDVYIDLLTDSGT-------NAMSDKQWAGLMMGDEAYA-GSRNFYHLERTVRELY-GFKYVVPTHQGRGAENLLSQ--- 104 (450)
T ss_pred CceEEEcccCCCc-------HHHHHHHHHHhhhcchhhc-CCCcHHHHHHHHHHHH-CCCeEEEcCCHHHHHHHHHH---
Confidence 3468999877543 566666 443332222232 2333456666676666 78899999999999887543
Q ss_pred hccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccC--C-CHHHHHHHHhcC-CCCeEEEEE
Q 011856 177 AFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPF--N-DVSALENLFENN-KGEIAAIIL 252 (476)
Q Consensus 177 ~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-d~~~le~~l~~~-~~~~a~vi~ 252 (476)
...++++.+ ..+.|...+...+...|............+. ....|+ | |+++|++.++.. .+.++.|.+
T Consensus 105 l~l~pGDeV-psn~~f~Tt~ahIe~~Gav~vDi~~dea~~~-------~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~ 176 (450)
T TIGR02618 105 IAIKPGDYV-PGNMYFTTTRYHQEKNGATFVDIIIDEAHDA-------QLNIPFKGNVDLKKLQKLIDEVGADKIPYICL 176 (450)
T ss_pred hCCCCcCEE-CCceeHHHHHHHHHhCCeEEEeeeccccccc-------ccCCCCCCCcCHHHHHHHhccccCcccCceEE
Confidence 344555544 3333334333334444442111100000000 000111 1 899999999853 224555555
Q ss_pred cccCC-CCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCccccccch----hhccCCC-----------Cchhhhhhhc
Q 011856 253 EPVVG-NSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGA----QEYFGVT-----------PDLTTLGKII 316 (476)
Q Consensus 253 ep~~~-~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~~----~~~~g~~-----------pDi~t~sK~l 316 (476)
+-.++ .||..++.. .+++|+++|++||+.||.|-++.- ..+ .+. ..+.+.. .|. +++|+.
T Consensus 177 e~t~N~~GG~pvs~~-~l~~I~elA~~~Gl~vi~DaAR~~-gNA-~~I~~re~g~~~~~i~ei~~e~~~~aD~-~~~S~~ 252 (450)
T TIGR02618 177 AVTVNLAGGQPVSMA-NMREVRELCEAHGIKVFYDATRCV-ENA-YFIKEREQGYEDKSIAEILKEMMSYADG-CTMSGK 252 (450)
T ss_pred EEecccCCCeeCCHH-HHHHHHHHHHHcCCEEEEEccchh-hCh-hhhhcccccccCCCHHHHHHHHhccCcE-EEEeec
Confidence 44444 456655444 499999999999999999998841 000 000 0011211 233 455555
Q ss_pred C-CCCcEEEEEe--cHHHHHhhcCCCCcc-ccCCCCC-cHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhc
Q 011856 317 G-GGLPVGAYGG--RRDIMEMVAPAGPMY-QAGTLSG-NPLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKA 391 (476)
Q Consensus 317 g-~G~~iG~~~~--~~~i~~~l~~~~~~~-~~~t~~~-~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 391 (476)
- +|.|+|.+++ ++++++.++.....+ .+-|+++ ..-.+.|...+|+...+..+.++.....++|.+.|.+.
T Consensus 253 Kd~~~~~GG~l~~~d~~l~~k~r~~~~~~eG~~tyGgla~r~~~ala~gL~e~~~~~y~~~r~~~a~~La~~L~~~---- 328 (450)
T TIGR02618 253 KDCLVNIGGFLCMNDDEMFQSAKELVVVFEGMPSYGGLAGRDMEAMAIGIREAVDYEYIEHRVKQVRYLGDKLKAA---- 328 (450)
T ss_pred cCCCCCCceEEEeCCHHHHHHHHHHhhhcCCccccCchhhhhHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHC----
Confidence 4 3457777755 778888776432222 1224433 11123333334554444566677777788999998876
Q ss_pred CCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHH-HHCCeEec---cC---C-----------CcceEEe-
Q 011856 392 GHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGM-LEEGVYFA---PS---Q-----------FEAGFTS- 452 (476)
Q Consensus 392 ~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~~~---~~---~-----------~~~~~~~- 452 (476)
+++...+..|..+.++...- .+...++.--...+.-.| ++.||--. .. . ...+|+.
T Consensus 329 Gvpv~~p~ggh~V~vda~~~-----lph~~~~~~p~~al~~~ly~~~gir~~e~g~~~~~~~~~~~~~~~~~~el~rlai 403 (450)
T TIGR02618 329 GVPIVEPVGGHAVFLDARRF-----LPHIPQDQFPAQSLAASIYVETGVRSMERGIVSAGRNNVTGEHHRPKLELVRLTI 403 (450)
T ss_pred CCcccCCCCcceEEEEhHHh-----CCCCChhhChHHHHHHHHHHHhCccEEeecceecccCCCCCcccCCccceeeecc
Confidence 33332345667777765431 111111111123344333 34454221 11 0 0123442
Q ss_pred --CCCcHHHHHHHHHHHHHHHHH
Q 011856 453 --LAHSSDDIQHTITAAEKVKMR 473 (476)
Q Consensus 453 --~~~t~e~i~~~~~~l~~~~~~ 473 (476)
-.-|.+++|...+++..+.+.
T Consensus 404 prr~yt~~h~~~v~~~~~~~~~~ 426 (450)
T TIGR02618 404 PRRVYTYAHMDVVADGIIKLYKH 426 (450)
T ss_pred ccccccHhHHHHHHHHHHHHHhh
Confidence 355899999999999988754
No 326
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.52 E-value=2.6e-12 Score=129.31 Aligned_cols=159 Identities=18% Similarity=0.158 Sum_probs=111.6
Q ss_pred CCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCC
Q 011856 137 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPG 216 (476)
Q Consensus 137 ~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~ 216 (476)
.++...+|++.++++. +.+.+++++||++|+..++... ...+++||+....|++.......... ..|
T Consensus 62 ~~p~~~~le~~lA~l~-g~~~av~~sSGt~Al~~al~~l--l~~Gd~Vi~~~~~y~~t~~~~~~~l~----------~~G 128 (433)
T PRK08134 62 SNPTVAVLEERVAALE-GGVGAIATASGQAALHLAIATL--MGAGSHIVASSALYGGSHNLLHYTLR----------RFG 128 (433)
T ss_pred cChHHHHHHHHHHHHh-CCCcEEEeCCHHHHHHHHHHHH--hCCCCEEEEeCCccHHHHHHHHHHHh----------hCC
Confidence 4566778888888888 4556899999999999998743 44567788887777764322211000 011
Q ss_pred CCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-Ccccc
Q 011856 217 VPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GFRLA 295 (476)
Q Consensus 217 ~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~r~g 295 (476)
..+..++.+|++++++.++. ++++|+++.+.++.|.+.+ +++|.++|++||+++|+|.+|. ++.
T Consensus 129 ------i~v~~vd~~d~~~l~~~i~~---~TklV~~e~~~np~g~v~D----i~~I~~la~~~gi~livD~t~a~~~~-- 193 (433)
T PRK08134 129 ------IETTFVKPGDIDGWRAAIRP---NTRLLFGETLGNPGLEVLD----IPTVAAIAHEAGVPLLVDSTFTTPYL-- 193 (433)
T ss_pred ------eEEEEECCCCHHHHHHhcCC---CCeEEEEECCCcccCcccC----HHHHHHHHHHcCCEEEEECCCccccc--
Confidence 13445555689999999974 6889999988888999999 9999999999999999999994 331
Q ss_pred ccchhhccCCCCchh--hhhhhcCC-CCcEEEEEe
Q 011856 296 YGGAQEYFGVTPDLT--TLGKIIGG-GLPVGAYGG 327 (476)
Q Consensus 296 ~~~~~~~~g~~pDi~--t~sK~lg~-G~~iG~~~~ 327 (476)
+.......|++ +..|.++| |-.+|+++.
T Consensus 194 ----~~pl~~GaD~vv~S~tK~l~g~g~~~gG~v~ 224 (433)
T PRK08134 194 ----LRPFEHGADLVYHSATKFLGGHGTAIGGVLV 224 (433)
T ss_pred ----CCchhcCCCEEEeccccccCCCCCceEEEEE
Confidence 11123345766 46698885 545666543
No 327
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.52 E-value=3.8e-13 Score=118.09 Aligned_cols=164 Identities=26% Similarity=0.230 Sum_probs=110.2
Q ss_pred HHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCC
Q 011856 142 NVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKG 220 (476)
Q Consensus 142 ~~la~~l~~~~~-~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~ 220 (476)
.++.+.+++.+. +.+++++++||++|+..+++.++ ..+++|++.++.|++.........|..+...+.......
T Consensus 3 ~~~~~~l~~~~~~~~~~~~~~~~~t~a~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~--- 77 (170)
T cd01494 3 EELEEKLARLLQPGNDKAVFVPSGTGANEAALLALL--GPGDEVIVDANGHGSRYWVAAELAGAKPVPVPVDDAGYG--- 77 (170)
T ss_pred HHHHHHHHHHcCCCCCcEEEeCCcHHHHHHHHHHhC--CCCCEEEEeecccceehhhHHHhcCCEEEEeccCCCCcc---
Confidence 466677777773 57789999999999999999542 236778888888888653333333433322111110000
Q ss_pred CCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccch
Q 011856 221 ATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGA 299 (476)
Q Consensus 221 ~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~ 299 (476)
..+.+.+++... .++++++++++.++++|...+ +++|.++|+++|+++|+|++|.++ .....
T Consensus 78 ---------~~~~~~~~~~~~--~~~~~~v~~~~~~~~~g~~~~----~~~l~~~~~~~~~~li~D~a~~~~~~~~~~-- 140 (170)
T cd01494 78 ---------GLDVAILEELKA--KPNVALIVITPNTTSGGVLVP----LKEIRKIAKEYGILLLVDAASAGGASPAPG-- 140 (170)
T ss_pred ---------chhhhhhhhccc--cCceEEEEEecCcCCCCeEcC----HHHHHHHHHHcCCEEEEecccccccccccc--
Confidence 002224444332 347899999999999998888 799999999999999999999876 33221
Q ss_pred hhccCCCCchhhhh--hhcCCCCcEEEEEec
Q 011856 300 QEYFGVTPDLTTLG--KIIGGGLPVGAYGGR 328 (476)
Q Consensus 300 ~~~~g~~pDi~t~s--K~lg~G~~iG~~~~~ 328 (476)
.......+|+++.| |.+++ .++|+++++
T Consensus 141 ~~~~~~~~d~~~~s~~K~~~~-~~~G~l~~~ 170 (170)
T cd01494 141 VLIPEGGADVVTFSLHKNLGG-EGGGVVIVK 170 (170)
T ss_pred cccccccCCEEEEEcccccCC-CceEEEEeC
Confidence 11223357888655 99987 778988764
No 328
>PLN02263 serine decarboxylase
Probab=99.51 E-value=5.3e-11 Score=118.75 Aligned_cols=290 Identities=13% Similarity=0.035 Sum_probs=176.2
Q ss_pred CCHHHHHHHHHHHhhCCC-CC--eEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCC
Q 011856 137 PCLLENVLAEMVISAVPS-IE--MVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPD 213 (476)
Q Consensus 137 ~~~~~~~la~~l~~~~~~-~e--~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~ 213 (476)
..+.+.++-+++++++.. .+ .-.+++||||+|..|+..||.+..+ .+++....-|-+..-++...|.++..++...
T Consensus 131 s~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~-~vvy~S~~aH~Sv~KAa~llgi~~~~Vp~d~ 209 (470)
T PLN02263 131 SRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFPD-GILYASRESHYSVFKAARMYRMECVKVDTLV 209 (470)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhcCC-cEEEEcCCccHHHHHHHHhcCCcceEeccCC
Confidence 357788899999998862 22 4689999999999999999986443 4666666777777777776666544433211
Q ss_pred CCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCC-----EEEEecc
Q 011856 214 SPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGA-----LLIFDEV 288 (476)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~-----llI~DEv 288 (476)
...+ |+++|++.|.+....+.+|+..--..+.|.+.| +++|.++|++||+ +|.+|-+
T Consensus 210 ~g~m--------------D~~aL~~aI~~d~~~P~iVvataGTT~~GAiDp----i~eIa~i~~~~g~~~~~iwlHVDAA 271 (470)
T PLN02263 210 SGEI--------------DCADFKAKLLANKDKPAIINVNIGTTVKGAVDD----LDLVIKTLEECGFSQDRFYIHCDGA 271 (470)
T ss_pred CCcC--------------cHHHHHHHHHhCCCCcEEEEEEecCCCCcCCCC----HHHHHHHHHHcCCccCCeeEEEecc
Confidence 1111 899999988764333455555554456889999 9999999999997 9999999
Q ss_pred ccCc-cc-cccchhhccC--CCCchhhh--hhhcCCCCcEEEEEecHHHHHhhcCCCCccc--cCCCCCc--HHHHHHHH
Q 011856 289 MTGF-RL-AYGGAQEYFG--VTPDLTTL--GKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQ--AGTLSGN--PLAMTAGI 358 (476)
Q Consensus 289 ~~g~-r~-g~~~~~~~~g--~~pDi~t~--sK~lg~G~~iG~~~~~~~i~~~l~~~~~~~~--~~t~~~~--~~~~aaa~ 358 (476)
+.|+ -. -.. . ..++ ...|-+++ -|.++..++.|.++.+++.++.+.....+.. -.|..++ -......-
T Consensus 272 ~GG~~lPf~~~-~-~~~df~~~vDSIsvD~HK~l~~P~~cgvll~R~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~al~lW 349 (470)
T PLN02263 272 LFGLMMPFVKR-A-PKVTFKKPIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLW 349 (470)
T ss_pred chhhHhhhccc-c-cccCCCcCccEEEECCccccCCCcCEEEEEEehhhHhhhccChHhhCCCCCCcCCCCCcHHHHHHH
Confidence 9887 31 101 0 1111 12454443 4988877899999998776655532111100 0122221 12233444
Q ss_pred HHHHHhcC---CCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHH
Q 011856 359 HTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML 435 (476)
Q Consensus 359 aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 435 (476)
.+|+.+.. .+..++..++.+++.++|++. ++..-.....+. +.|..+ . ..+.
T Consensus 350 ~~L~~~G~~G~~~~i~~~~~~A~~l~~~l~~~----g~~~~~~p~s~~--V~f~~p-----------~--------~~~~ 404 (470)
T PLN02263 350 YTLNRKGYRGFQKEVQKCLRNAHYLKDRLREA----GISAMLNELSST--VVFERP-----------K--------DEEF 404 (470)
T ss_pred HHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC----CCeEEeCCCceE--EEEecC-----------c--------hHHh
Confidence 55555444 445555566677777777764 322222222222 223211 1 1123
Q ss_pred HCCeEeccCCCc-ceEEeCCCcHHHHHHHHHHHHHHHH
Q 011856 436 EEGVYFAPSQFE-AGFTSLAHSSDDIQHTITAAEKVKM 472 (476)
Q Consensus 436 ~~Gv~~~~~~~~-~~~~~~~~t~e~i~~~~~~l~~~~~ 472 (476)
.+|-.+...+.. ++.+...++.+.+|++++-|++...
T Consensus 405 ~~gW~L~~~~~~~Hivvmphv~~~~id~fi~DL~~~~~ 442 (470)
T PLN02263 405 VRRWQLACQGNIAHVVVMPSVTIEKLDYFLKELVEKRS 442 (470)
T ss_pred hcceEEccCCCcEEEEEcCCCCHHHHHHHHHHHHHHHh
Confidence 466666554321 2333455688999999999988765
No 329
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.50 E-value=8e-12 Score=135.58 Aligned_cols=301 Identities=16% Similarity=0.172 Sum_probs=172.1
Q ss_pred HHHHHHHHHHHhhCCCCCeEEE-eCCHHHHHHHHHHHHHhcc---C--CceEEEEeCCCCCCchhHHhhcCCCCccCCCC
Q 011856 139 LLENVLAEMVISAVPSIEMVRF-VNSGTEACMGVLRLARAFT---G--RERIIKFEGCYHGHADPFLVKAGSGVATLGLP 212 (476)
Q Consensus 139 ~~~~~la~~l~~~~~~~e~v~~-~~sGseA~~~al~~ar~~~---~--~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~ 212 (476)
+...++.+++++++ +.+.+.+ .++|+.++.+++..+|.+. + ++++++...+-|++....+...|..+...+..
T Consensus 542 ~~i~e~q~~l~elt-G~d~~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~~~G~~vv~v~~d 620 (954)
T PRK05367 542 ELIDQLEAWLAEIT-GYDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPASAVMAGMKVVVVACD 620 (954)
T ss_pred HHHHHHHHHHHHHH-CCCCEEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHHHHHCCCEEEEECCC
Confidence 45678888999988 5555555 4577888877776666541 1 23456666777877766666656544332221
Q ss_pred CCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-C
Q 011856 213 DSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-G 291 (476)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~-g 291 (476)
. .+. -|+++|++.++++++++++|++......|+...+ +++|.++|+++|+++++|.++. +
T Consensus 621 ~-~G~-------------iD~~~L~~~i~~~~~~la~V~it~pst~G~~e~~----I~eI~~i~h~~G~~v~VDgA~~~a 682 (954)
T PRK05367 621 E-NGN-------------IDLDDLRAKAEEHADNLAAIMITYPSTHGVFEET----IREICEIVHEHGGQVYLDGANMNA 682 (954)
T ss_pred C-CCC-------------cCHHHHHHHHhccCCCeEEEEEEcCCCCeeecCC----HHHHHHHHHHcCCEEEEECcChhh
Confidence 1 111 1799999999865456776655443333444467 9999999999999999999994 2
Q ss_pred c-cccccchhhccCCCCchhhhh--hhcC-----CCCcEEEEEecHHHHHhhcCCC--C-ccc--cCCCCCcHH----HH
Q 011856 292 F-RLAYGGAQEYFGVTPDLTTLG--KIIG-----GGLPVGAYGGRRDIMEMVAPAG--P-MYQ--AGTLSGNPL----AM 354 (476)
Q Consensus 292 ~-r~g~~~~~~~~g~~pDi~t~s--K~lg-----~G~~iG~~~~~~~i~~~l~~~~--~-~~~--~~t~~~~~~----~~ 354 (476)
+ .... ...+ ..|+++++ |.|+ ||--+|.+.+++.+...+-... . ... .++....+. .+
T Consensus 683 l~~l~~---pg~~--GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~~l~p~lpg~~v~~~~~~~~~g~v~ta~~g~al~~ 757 (954)
T PRK05367 683 QVGLAR---PGDI--GADVSHLNLHKTFCIPHGGGGPGVGPIGVKAHLAPFLPGHPVQIAGGETGIGAVSAAPFGSASIL 757 (954)
T ss_pred ccCCCC---hhhc--CCCEEEecCcccCCCCcCCCCCceEEEeecccccccCCCCccCcCCCCCCcCcchhHHHHHHHHH
Confidence 2 1110 1122 35777655 9875 2344788887876655443110 0 000 122222222 22
Q ss_pred HHHHHHHHHhcCCCHHHHHH---HHHHHHHHHHHHHhhhcCCceEeeeecee--EEEEEecCCCcCchhhcccchHHHHH
Q 011856 355 TAGIHTLKRLKEPGTYEYLN---KITGELTQGIIDAGKKAGHAICGGYISGM--FGFFFTEGPVYNFEDAKKSETTKFAR 429 (476)
Q Consensus 355 aaa~aal~~~~~~~~~~~~~---~~~~~l~~~L~~~~~~~~~~~~v~~~g~~--~~i~~~~~~~~~~~~~~~~~~~~~~~ 429 (476)
..+...+..+..+.+.+..+ .+..|+.++|.+. +++...-++...+ +.+.+..-+ ........+
T Consensus 758 ~~a~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~L~~~---~~~~~~~~~~~~~~e~i~~~~~~~--------~~~g~~~~d 826 (954)
T PRK05367 758 PISWMYIRMMGAEGLRQATEVAILNANYIAKRLKDH---YPVLYTGANGRVAHECILDLRPLK--------ESTGITVDD 826 (954)
T ss_pred HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhh---cCccccCCCCCcccceEEEeeccc--------ccCCCCHHH
Confidence 22333334343355555555 7888999988764 2221110000001 111221000 000112367
Q ss_pred HHHHHHHCCeEeccCC---CcceEE--eCCCcHHHHHHHHHHHHHHHHHh
Q 011856 430 FYRGMLEEGVYFAPSQ---FEAGFT--SLAHSSDDIQHTITAAEKVKMRF 474 (476)
Q Consensus 430 ~~~~l~~~Gv~~~~~~---~~~~~~--~~~~t~e~i~~~~~~l~~~~~~~ 474 (476)
+.+.|.+.|+...... .+.+++ .-..+++|||+++++++.+..++
T Consensus 827 i~krL~d~G~~~~t~~~pv~~~l~i~ptE~~s~~elDr~~~al~~i~~e~ 876 (954)
T PRK05367 827 IAKRLIDYGFHAPTMSFPVAGTLMVEPTESESKAELDRFCDAMIAIRAEI 876 (954)
T ss_pred HHHHHHHCCCeEeecCCccCCEEEEEeeecCCHHHHHHHHHHHHHHHHHH
Confidence 8899999999865432 233444 46679999999999998887654
No 330
>PLN02880 tyrosine decarboxylase
Probab=99.49 E-value=8.9e-12 Score=127.28 Aligned_cols=314 Identities=12% Similarity=0.047 Sum_probs=179.7
Q ss_pred CCHHHHHHHHHHHhhCCCCC--------eEEEeCCHHHHHHHHHHHHHhcc-------C-CceEEEEeCCCCCCchhHHh
Q 011856 137 PCLLENVLAEMVISAVPSIE--------MVRFVNSGTEACMGVLRLARAFT-------G-RERIIKFEGCYHGHADPFLV 200 (476)
Q Consensus 137 ~~~~~~~la~~l~~~~~~~e--------~v~~~~sGseA~~~al~~ar~~~-------~-~~~ii~~~~~yhg~~~~~~~ 200 (476)
..+.+.++.+++++.++-++ .-++++|||+||..|+.+||... + ++-++.....-|-+..-++.
T Consensus 120 ~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~Sv~Kaa~ 199 (490)
T PLN02880 120 ATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSALQKACQ 199 (490)
T ss_pred cHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHHHHHHHH
Confidence 35788899999999885222 36889999999999999998632 1 23345455556877777777
Q ss_pred hcCCCC---ccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcC---CCCeEEEEEcccCCCCCcccCCHHHHHHHHH
Q 011856 201 KAGSGV---ATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN---KGEIAAIILEPVVGNSGFIAPKPDFLNAIRR 274 (476)
Q Consensus 201 ~~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~---~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~ 274 (476)
..|.+. ..++...... .. -|+++|++.|++. +..+.+|+..--..+.|.+.| +++|.+
T Consensus 200 ~lGlg~~~v~~Vp~d~~~~---------~~---md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDp----l~eI~~ 263 (490)
T PLN02880 200 IAGIHPENCRLLKTDSSTN---------YA---LAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDP----LLELGK 263 (490)
T ss_pred HcCCCHHHEEEeecCCCcC---------Cc---CCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCc----HHHHHH
Confidence 666542 2211110000 00 1799999998642 223455555555566899999 999999
Q ss_pred HHHHhCCEEEEeccccCc-cccccchhhccCC-CCchhh--hhhhcCCCCcEEEEEecHH--HHHhhcCCCCccc-----
Q 011856 275 ITKENGALLIFDEVMTGF-RLAYGGAQEYFGV-TPDLTT--LGKIIGGGLPVGAYGGRRD--IMEMVAPAGPMYQ----- 343 (476)
Q Consensus 275 l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~-~pDi~t--~sK~lg~G~~iG~~~~~~~--i~~~l~~~~~~~~----- 343 (476)
+|++||+++++|-+|.|+ .....+-....|+ ..|-++ +-|.+...+..|.++.++. +.+.+.....+..
T Consensus 264 i~~~~~iwlHVDaA~gg~~~~~~~~~~~l~gie~aDSit~d~HKwl~~P~~~g~llvr~~~~l~~~~~~~~~Yl~~~~~~ 343 (490)
T PLN02880 264 IAKSNGMWFHVDAAYAGSACICPEYRHYIDGVEEADSFNMNAHKWFLTNFDCSLLWVKDRNALIQSLSTNPEFLKNKASQ 343 (490)
T ss_pred HHHHcCCEEEEehhhHHHHHhCHHHHHHhcCchhcCEEEECchhhcCCCccEEEEEEeCHHHHHHHHccCHHHhcCcccc
Confidence 999999999999999775 3221111112343 467665 5699987788999977642 2333321110000
Q ss_pred ------cCCC---CCcHHHHHHHHHHHHHhcCCCHHHHHH---HHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecC
Q 011856 344 ------AGTL---SGNPLAMTAGIHTLKRLKEPGTYEYLN---KITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEG 411 (476)
Q Consensus 344 ------~~t~---~~~~~~~aaa~aal~~~~~~~~~~~~~---~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~ 411 (476)
...+ .+..........+|+.+..+.+.++++ ++.+++.+.|++.. ++....+....++.|.+...
T Consensus 344 ~~~~~~~~~~~i~~~rr~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~---~~el~~~~~~~iv~Fr~~~~ 420 (490)
T PLN02880 344 ANSVVDYKDWQIPLGRRFRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDS---RFEVVTPRIFSLVCFRLVPP 420 (490)
T ss_pred ccCCCChhccCcCCCCcccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCC---CEEEecCCceEEEEEEEeCC
Confidence 0000 011111222223455554456666666 77777777665431 11111122333445544321
Q ss_pred CCcCchhhcccchHHHHHHHHHHHHCCe-EeccC---CCcceEE---eCCCcHHHHHHHHHHHHHHHHHh
Q 011856 412 PVYNFEDAKKSETTKFARFYRGMLEEGV-YFAPS---QFEAGFT---SLAHSSDDIQHTITAAEKVKMRF 474 (476)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~l~~~Gv-~~~~~---~~~~~~~---~~~~t~e~i~~~~~~l~~~~~~~ 474 (476)
... .........++.+.|.+.|- ++... +...+|+ +...+++|++.+++.|.+..+++
T Consensus 421 ~~~-----~~~~~~~n~~l~~~l~~~g~~~v~~t~~~g~~~lR~~~~n~~tt~~di~~~~~~i~~~~~~~ 485 (490)
T PLN02880 421 KNN-----EDNGNKLNHDLLDAVNSSGKIFISHTVLSGKYVLRFAVGAPLTEERHVTAAWKVLQDEASKL 485 (490)
T ss_pred CCC-----hhhHHHHHHHHHHHHHhCCCEEEEEEEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Confidence 000 00001223456667776654 44432 2234565 35667899999999999887765
No 331
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.48 E-value=2.7e-11 Score=129.35 Aligned_cols=300 Identities=16% Similarity=0.148 Sum_probs=180.7
Q ss_pred HHHHHHHHHHHhhCCCCC-eEEEeCCHHHHHHHHHHHHHhcc-----CCceEEEEeCCCCCCchhHHhhcCCCCccCCCC
Q 011856 139 LLENVLAEMVISAVPSIE-MVRFVNSGTEACMGVLRLARAFT-----GRERIIKFEGCYHGHADPFLVKAGSGVATLGLP 212 (476)
Q Consensus 139 ~~~~~la~~l~~~~~~~e-~v~~~~sGseA~~~al~~ar~~~-----~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~ 212 (476)
+...++.+++++++ +.+ --++.++|+.|..+++..+|.+. +++++++...+-||+........|..+..++..
T Consensus 530 q~i~elq~~l~elt-Gmd~~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnPasa~~~G~~Vv~V~~d 608 (939)
T TIGR00461 530 ELIAQLEKWLCSIT-GFDAISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNPASAAMAGMQVVPVNCD 608 (939)
T ss_pred HHHHHHHHHHHHHH-CCCCcccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCHHHHHHCCCEEEEeccC
Confidence 45678899999998 444 44567788888877777776642 234566677788988776666666544332221
Q ss_pred CCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccC-
Q 011856 213 DSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTG- 291 (476)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g- 291 (476)
..|. -|+++|++.++++++++++|++...++. |.+.++ +++|.++|+++|.++++|-++..
T Consensus 609 -~~G~-------------iDle~L~~~i~~~~~~taaV~iT~pst~-G~~e~~---I~eI~~iah~~G~~v~VDgAq~~a 670 (939)
T TIGR00461 609 -QDGN-------------IDLVDLKNKAEQHGDELAAVMVTYPSTH-GVFEPT---IQHACDIVHSFGGQVYLDGANMNA 670 (939)
T ss_pred -CCCC-------------cCHHHHHHHHhhcCCceEEEEEEeCCcC-ceeccc---HHHHHHHHHHcCCEEEEEecChhh
Confidence 1121 1899999999876567888877555444 555332 89999999999999999999942
Q ss_pred c-cccccchhhccCCCCchhhhh--hhcC-----CCCcEEEEEecHHHHHhhcCCCCc--------------cccCCCCC
Q 011856 292 F-RLAYGGAQEYFGVTPDLTTLG--KIIG-----GGLPVGAYGGRRDIMEMVAPAGPM--------------YQAGTLSG 349 (476)
Q Consensus 292 ~-r~g~~~~~~~~g~~pDi~t~s--K~lg-----~G~~iG~~~~~~~i~~~l~~~~~~--------------~~~~t~~~ 349 (476)
. ..- ..-....|+++++ |.|+ ||--+|.+.+++++...+- .+.. ...+...+
T Consensus 671 l~~l~-----~Pg~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~L~~~lP-g~~v~~t~d~~greq~Iga~s~~~~g 744 (939)
T TIGR00461 671 QVGLT-----SPGDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSHLIPFLP-KHDVVSMITGIGGSKSIGSVSAAPYG 744 (939)
T ss_pred CCCCC-----CccccCCCEEEecCCccCCCCCCCCCCCeEEEEEhhhchhhcC-CCcccccccCCCCccccccccccccC
Confidence 2 111 1112335887664 9887 4556899999987655442 1111 01111234
Q ss_pred cHHHHHHHHHHHHHhcCCC---HHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEe--cCCCcCchhhcccch
Q 011856 350 NPLAMTAGIHTLKRLKEPG---TYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFT--EGPVYNFEDAKKSET 424 (476)
Q Consensus 350 ~~~~~aaa~aal~~~~~~~---~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~--~~~~~~~~~~~~~~~ 424 (476)
+.+.+..+...|..+..+. ..+..-.+..|+.++|.+. +++.. .+....+.-+|. ..+. .....
T Consensus 745 ~a~~~l~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~~---~~~l~--~~~~~~~~hEfv~~~~~~------~~~~g 813 (939)
T TIGR00461 745 SASILPISWMYIKMMGNEGLPKASVVAILNANYMATRLKDH---YPILF--VGTLKHVAHECILDLRPL------KAKTG 813 (939)
T ss_pred cHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhcc---Ccccc--cCCCCceeEEEEEeccch------hhhcC
Confidence 4444455555666555443 3444556778888888762 22221 111111112221 1100 00001
Q ss_pred HHHHHHHHHHHHCCeEeccCCCc---ce--EEeCCCcHHHHHHHHHHHHHHHHHh
Q 011856 425 TKFARFYRGMLEEGVYFAPSQFE---AG--FTSLAHSSDDIQHTITAAEKVKMRF 474 (476)
Q Consensus 425 ~~~~~~~~~l~~~Gv~~~~~~~~---~~--~~~~~~t~e~i~~~~~~l~~~~~~~ 474 (476)
....++.+.|++.|++.....++ .+ +++-..+++|||++++++.++-+++
T Consensus 814 ~~~~dIakrL~d~G~hapt~~~pv~g~lmiepTE~eskeelD~f~~al~~I~~e~ 868 (939)
T TIGR00461 814 IEAIDVAKRLQDYGFHAPTLSFPVPGTLMVEPTESESLEELDRFCDAMIAIKEEI 868 (939)
T ss_pred CCHHHHHHHHHhCCeeccccCCccCCeEEEEeeccCCHHHHHHHHHHHHHHHHHH
Confidence 22468999999999975433211 22 3355679999999999998776553
No 332
>PLN02590 probable tyrosine decarboxylase
Probab=99.47 E-value=4.9e-11 Score=122.01 Aligned_cols=314 Identities=10% Similarity=0.009 Sum_probs=176.3
Q ss_pred CCHHHHHHHHHHHhhCCCCC--------eEEEeCCHHHHHHHHHHHHHhcc-------C-CceEEEEeCCCCCCchhHHh
Q 011856 137 PCLLENVLAEMVISAVPSIE--------MVRFVNSGTEACMGVLRLARAFT-------G-RERIIKFEGCYHGHADPFLV 200 (476)
Q Consensus 137 ~~~~~~~la~~l~~~~~~~e--------~v~~~~sGseA~~~al~~ar~~~-------~-~~~ii~~~~~yhg~~~~~~~ 200 (476)
..+++.++.+++++.++-++ .-+|++|||+||..|+..||... + ++-++.....-|-+..-++.
T Consensus 168 ~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv~KAa~ 247 (539)
T PLN02590 168 ATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHSSFRKACL 247 (539)
T ss_pred hHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchHHHHHHHH
Confidence 35788889999999885232 36789999999999999998641 1 22344445555666666666
Q ss_pred hcCCC---CccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcC---CCCeEEEEEcccCCCCCcccCCHHHHHHHHH
Q 011856 201 KAGSG---VATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN---KGEIAAIILEPVVGNSGFIAPKPDFLNAIRR 274 (476)
Q Consensus 201 ~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~---~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~ 274 (476)
..|.+ +..++...... .. -|+++|++.|++. +..+.+|+..--..+.|.+.| |++|.+
T Consensus 248 ilGlg~~~vr~Vp~d~~~~---------~~---md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDp----l~~Ia~ 311 (539)
T PLN02590 248 IGGIHEENIRLLKTDSSTN---------YG---MPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDP----LVPLGN 311 (539)
T ss_pred HcCCCcccEEEEeCCCCCC---------Cc---CCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCC----HHHHHH
Confidence 65543 21111110000 00 1899999999642 122344555555556899999 999999
Q ss_pred HHHHhCCEEEEeccccCc-cccccchhhccCC-CCchhh--hhhhcCCCCcEEEEEecHH--HHHhhcCCCCcc------
Q 011856 275 ITKENGALLIFDEVMTGF-RLAYGGAQEYFGV-TPDLTT--LGKIIGGGLPVGAYGGRRD--IMEMVAPAGPMY------ 342 (476)
Q Consensus 275 l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~-~pDi~t--~sK~lg~G~~iG~~~~~~~--i~~~l~~~~~~~------ 342 (476)
+|++||++|++|-+|.|+ ........-..|+ ..|-++ .-|.+...+..|.++.+.. +.+.+.....+.
T Consensus 312 i~~~~g~WlHVDaA~GG~al~~~~~r~~~~Gie~ADSit~D~HK~l~~p~~cg~llvr~~~~l~~a~~~~~~YL~~~~~~ 391 (539)
T PLN02590 312 IAKKYGIWLHVDAAYAGNACICPEYRKFIDGIENADSFNMNAHKWLFANQTCSPLWVKDRYSLIDALKTNPEYLEFKVSK 391 (539)
T ss_pred HHHHhCCeEEEecchhhhhhcChhhHHHhcCCccCCEEEECchhhcCcCcCEEEEEecCHHHHHHHhhcCHHHhCCcccc
Confidence 999999999999999887 3221111112343 246554 4599888888999877653 333332110000
Q ss_pred -----ccCCC---CCcHHHHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecC
Q 011856 343 -----QAGTL---SGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEG 411 (476)
Q Consensus 343 -----~~~t~---~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~ 411 (476)
....+ ..-.........+|+.+-. .+.+++.-++.+++.+.|++.. .+....+..-.++.|.+...
T Consensus 392 ~~~~~d~~d~~i~lsRr~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~---~fel~~~~~l~iVcFr~~~~ 468 (539)
T PLN02590 392 KDTVVNYKDWQISLSRRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDP---SFEVVTTRYFSLVCFRLAPV 468 (539)
T ss_pred cccCCCccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CeEEecCCceEEEEEEecCC
Confidence 00000 1112333334455555443 3445555566666666665431 11111111112222322211
Q ss_pred CCcCchhhcccchHHHHHHHHHHHHCCeE-eccC---CCcceEE---eCCCcHHHHHHHHHHHHHHHHHh
Q 011856 412 PVYNFEDAKKSETTKFARFYRGMLEEGVY-FAPS---QFEAGFT---SLAHSSDDIQHTITAAEKVKMRF 474 (476)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~-~~~~---~~~~~~~---~~~~t~e~i~~~~~~l~~~~~~~ 474 (476)
.... ........++.+.+.+.|.. +.+. +...+|+ +...+++|++.+++.|.+...++
T Consensus 469 ~~~~-----~~~~~ln~~l~~~l~~~G~~~vs~t~~~g~~~lR~~i~n~~T~~~dv~~~~~~i~~~a~~~ 533 (539)
T PLN02590 469 DGDE-----DQCNERNRELLAAVNSTGKIFISHTALSGKFVLRFAVGAPLTEEKHVTEAWQIIQKHASKF 533 (539)
T ss_pred CCCH-----HHHHHHHHHHHHHHHhCCCEEEEeeEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHh
Confidence 0000 00122345677777777754 3332 2234455 46678999999999999887665
No 333
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.46 E-value=4.7e-11 Score=108.82 Aligned_cols=310 Identities=11% Similarity=0.078 Sum_probs=187.4
Q ss_pred ccCCCCcHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCC--CCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEe
Q 011856 111 AIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP--SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFE 188 (476)
Q Consensus 111 ~~lG~~~p~v~~a~~~~l~~~~~~~~~~~~~~~la~~l~~~~~--~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~ 188 (476)
+.+||.+|++.+-+.+.++. +...|. ...-.++..||+.++++|+-- ...++++|+++.
T Consensus 39 ~~lgh~sPe~~qIm~~v~eg-----------------ikyVFkT~n~~tf~isgsGh~g~E~al~N--~lePgd~vLv~~ 99 (385)
T KOG2862|consen 39 PSLGHMSPEFVQIMDEVLEG-----------------IKYVFKTANAQTFVISGSGHSGWEAALVN--LLEPGDNVLVVS 99 (385)
T ss_pred CccccCCHHHHHHHHHHHHH-----------------HHHHhccCCCceEEEecCCcchHHHHHHh--hcCCCCeEEEEE
Confidence 67888888877766554432 222222 234567788899999999974 344778888887
Q ss_pred CCCCCCchhH-HhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHH
Q 011856 189 GCYHGHADPF-LVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPD 267 (476)
Q Consensus 189 ~~yhg~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~ 267 (476)
.+-+|....- ....|..+...+.+....+ .++.+++.|.+| ...+|.+...-+.+|+..+.
T Consensus 100 ~G~wg~ra~D~~~r~ga~V~~v~~~~G~~~--------------~le~i~~~lsqh--~p~~vfv~hgdsSTgV~q~~-- 161 (385)
T KOG2862|consen 100 TGTWGQRAADCARRYGAEVDVVEADIGQAV--------------PLEEITEKLSQH--KPKAVFVTHGDSSTGVLQDL-- 161 (385)
T ss_pred echHHHHHHHHHHhhCceeeEEecCcccCc--------------cHHHHHHHHHhc--CCceEEEEecCccccccchH--
Confidence 6665543222 2223444433222222222 589999999987 67788888887888887762
Q ss_pred HHHHHHHHHHHhCCEEEEeccccCccccccchhhccCCCCchhhhhhhcCCCCcEEEEEecHHHHHhhcCCCC--c--cc
Q 011856 268 FLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGP--M--YQ 343 (476)
Q Consensus 268 ~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pDi~t~sK~lg~G~~iG~~~~~~~i~~~l~~~~~--~--~~ 343 (476)
++.+.++|++|+++|++|-|-+ + .|..|..+.+|++.-...--|++++--.++-+..++..++.++.++. . +.
T Consensus 162 -~~~~g~lc~k~~~lllVD~VaS-l-ggt~F~mDewgVDvaytgSQKaL~aP~GLsiisfS~ka~~~~~~rK~~~~~~yF 238 (385)
T KOG2862|consen 162 -LAISGELCHKHEALLLVDTVAS-L-GGTEFEMDEWGVDVAYTGSQKALGAPAGLSIISFSDKALEAIRDRKTKPVSFYF 238 (385)
T ss_pred -HHHHHHHhhcCCeEEEEechhh-c-CCccceehhhcccEEEecchhhcCCCCCcceeecCHHHHHHHhhccCCceEEEE
Confidence 5667789999999999998875 1 23456677777744333456999842123447778888888875322 0 00
Q ss_pred ----cC------------CCCCcHHHHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeE
Q 011856 344 ----AG------------TLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMF 404 (476)
Q Consensus 344 ----~~------------t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~ 404 (476)
.. .+..+.....+..++|+.+.+ ++..++-++++++++..|++++-+.-...+-......-
T Consensus 239 d~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~GLq~fv~~e~~rlptvt 318 (385)
T KOG2862|consen 239 DILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALALIAEEGLENSWRRHREMSKWLKLSLEALGLQLFVVDEELRLPTVT 318 (385)
T ss_pred eHHhhcchhccCCcccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccceecChhhccCcce
Confidence 00 112233344555567776654 56667778888888888888643221111000000111
Q ss_pred EEEEecCCCcCchhhcccchHHHHHHHHHHHHCCe-EeccC----CCcceEE---eCCCcHHHHHHHHHHHHHHHHH
Q 011856 405 GFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGV-YFAPS----QFEAGFT---SLAHSSDDIQHTITAAEKVKMR 473 (476)
Q Consensus 405 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv-~~~~~----~~~~~~~---~~~~t~e~i~~~~~~l~~~~~~ 473 (476)
. ...|...+..+++..+..++. .+..+ ....+|+ ....+.|.++..++.|+.++.+
T Consensus 319 t-------------v~vp~gvDw~dVv~~~~~~~~vei~gglg~~~gKv~RIGl~gcna~~e~i~~v~~ll~~alq~ 382 (385)
T KOG2862|consen 319 T-------------VKVPYGVDWKDVVAYAMSHYVVEIGGGLGPTVGKVFRIGLLGCNANVEYIDNVVELLKLALQR 382 (385)
T ss_pred e-------------eecCCCCCHHHHHHHHHHhcCEEeccccCCCcccEEEEEEeeccCCcHHHHHHHHHHHHHHhh
Confidence 1 122333344678888888844 44332 2234566 3455889999999999988865
No 334
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.46 E-value=6.9e-11 Score=116.87 Aligned_cols=346 Identities=15% Similarity=0.053 Sum_probs=176.6
Q ss_pred CCEEEecccChhhccCCCCcHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHh
Q 011856 98 GNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARA 177 (476)
Q Consensus 98 G~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~~~~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~ 177 (476)
...|||+.+-.++ ..+.++....+..|.-.+.-++...+|.+.+++++ +.+.+++++||+.|+..+.. .
T Consensus 44 ~~v~IDLlSDS~T-------~aMs~~q~a~~~vGDd~Yagd~s~~~LE~~vAe~l-G~e~aV~v~sGTaAl~ll~~---l 112 (460)
T PRK13237 44 EDVYIDLLTDSGT-------NAMSDRQWAGMMIGDEAYAGSRNFYHLEETVQEYY-GFKHVVPTHQGRGAENLLSR---I 112 (460)
T ss_pred CcEEEECcccCCc-------hhccHHHHHHHhhcchhhcCCCcHHHHHHHHHHHH-CCCeEEEeCCHHHHHHHHHH---h
Confidence 4468999887544 34444433333333222222333345666666666 78899999999999998654 2
Q ss_pred ccCCceEEEEeCCCCCCchhH-HhhcCCCCccCCCCCCCCCCCCCCCceeeccCC-CHHHHHHHHhcC-CCCeEEEEE-c
Q 011856 178 FTGRERIIKFEGCYHGHADPF-LVKAGSGVATLGLPDSPGVPKGATYETLTAPFN-DVSALENLFENN-KGEIAAIIL-E 253 (476)
Q Consensus 178 ~~~~~~ii~~~~~yhg~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~~~le~~l~~~-~~~~a~vi~-e 253 (476)
..++++++ .+.+|-.+... +...|............. +. ....+..| |+++|++.|++. .++++.+.+ .
T Consensus 113 ~v~pGd~V--p~n~~f~Tt~ahI~~~Ga~fvDi~~d~a~~-~~----~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~i 185 (460)
T PRK13237 113 AIKPGQYV--PGNMYFTTTRYHQELNGGIFVDIIIDEAHD-AQ----SDHPFKGNVDLDKLQALIDEVGAENIAYICLAV 185 (460)
T ss_pred CCCCcCEE--CCccchHhhHHHHHhCCcEEEeeecccccc-cc----cCCCCCCCcCHHHHHHHhccccCCccCceEEEE
Confidence 34444444 33334333322 444443111100000000 00 00011122 899999999853 234444443 3
Q ss_pred ccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccc-cC---c---cccccchhh------ccCCCCchhhh--hhhcCC
Q 011856 254 PVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM-TG---F---RLAYGGAQE------YFGVTPDLTTL--GKIIGG 318 (476)
Q Consensus 254 p~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~-~g---~---r~g~~~~~~------~~g~~pDi~t~--sK~lg~ 318 (476)
+++..||...+.. .+++|+++|++||+.||.|-++ .| | |........ ...-.-|++|| .|.++.
T Consensus 186 tvn~~GGqpvs~~-~m~~I~elA~~~Gl~Vi~DaAra~gna~fI~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~ 264 (460)
T PRK13237 186 TVNLAGGQPVSMA-NMRAVRELCDKHGIKVFFDATRCVENAYFIKEREEGYQDKSIKEIVHEMFSYADGCTMSGKKDCLV 264 (460)
T ss_pred ecccCCCeeCCHH-hHHHHHHHHHHcCCEEEEECcchhcChhhhcccccccCCCcHhHHhhhccCcCcEEEEeCCCCCCC
Confidence 4444456555444 4999999999999999999998 34 3 111110000 01112466654 476664
Q ss_pred CCcE-EEEEe-cHHHHHhhcCCCCcc-ccCCCCCcHH-HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCc
Q 011856 319 GLPV-GAYGG-RRDIMEMVAPAGPMY-QAGTLSGNPL-AMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHA 394 (476)
Q Consensus 319 G~~i-G~~~~-~~~i~~~l~~~~~~~-~~~t~~~~~~-~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 394 (476)
++ |+++. ++++.+.++.....+ .+.|+++-.- -+.|....|+...++++.++.-+..++|.+.|.+. +++
T Consensus 265 --~~GG~i~t~D~eL~~~~r~~~~~~eG~~tygg~~grd~~alAvgl~E~~~~~y~~~ri~~~~~l~~~L~~~----Gvp 338 (460)
T PRK13237 265 --NIGGFLAMNDEELFDEAKELVVVYEGMPSYGGMAGRDMEAMAIGIEESVQYEYIEHRVGQVRYLGEKLLAA----GVP 338 (460)
T ss_pred --CCceEEEECCHHHHHHHHHhccccCCCcCCCChhhhHHHHHHhHHHhhchHHHHHHHHHHHHHHHHHHHHC----CCc
Confidence 44 55544 567777776422222 3345554222 12222223443334567777777788888888764 444
Q ss_pred eEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHH-HHCCeEec---c---CC-----------CcceEEe---C
Q 011856 395 ICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGM-LEEGVYFA---P---SQ-----------FEAGFTS---L 453 (476)
Q Consensus 395 ~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~~~---~---~~-----------~~~~~~~---~ 453 (476)
...+..|.-+.++... +.+...++.--...+...| ++-||-.. . +. ...+|+. -
T Consensus 339 v~~p~ggH~v~vda~~-----~lph~~~~~~p~~al~~~ly~~~GiR~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr 413 (460)
T PRK13237 339 IVEPVGGHAVFLDARR-----FLPHLPQDQFPAQALAAELYIESGVRSMERGIVSAGRDPKTGENHYPKLELVRLTIPRR 413 (460)
T ss_pred eecCCCceEEEEEhHH-----hCCCCCcccChHHHHHHHHHHHhCcCeEeecceecccCCCCCccCCCccceeeeccccc
Confidence 4344455444444322 1111111111123343333 34454321 1 00 1123442 3
Q ss_pred CCcHHHHHHHHHHHHHHHHH
Q 011856 454 AHSSDDIQHTITAAEKVKMR 473 (476)
Q Consensus 454 ~~t~e~i~~~~~~l~~~~~~ 473 (476)
.-|.+++|...++|..+.+.
T Consensus 414 ~yt~~h~~~v~~~~~~~~~~ 433 (460)
T PRK13237 414 VYTYAHMDVVADSVIKLYKH 433 (460)
T ss_pred cccHHHHHHHHHHHHHHHHh
Confidence 55899999999999987754
No 335
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.46 E-value=5e-11 Score=122.11 Aligned_cols=231 Identities=18% Similarity=0.101 Sum_probs=137.5
Q ss_pred CCHHHHHHHHHHHhhCCC--------------CCeEEEeCCHHHHHHHHHHHHHhccC----------------------
Q 011856 137 PCLLENVLAEMVISAVPS--------------IEMVRFVNSGTEACMGVLRLARAFTG---------------------- 180 (476)
Q Consensus 137 ~~~~~~~la~~l~~~~~~--------------~e~v~~~~sGseA~~~al~~ar~~~~---------------------- 180 (476)
.++++.++.+++++.+.+ ...-.|++|||+||..|+..||...-
T Consensus 127 ~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~~~~ 206 (522)
T TIGR03799 127 FTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAALKHYG 206 (522)
T ss_pred hHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhhhhcc
Confidence 357888888888887621 12357899999999999999986420
Q ss_pred -CceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCC-----CHHHHHHHHhc---CCCCeEEEE
Q 011856 181 -RERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFN-----DVSALENLFEN---NKGEIAAII 251 (476)
Q Consensus 181 -~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~le~~l~~---~~~~~a~vi 251 (476)
++.+|+....-|-+...+....|.+.. ++..+|.+ |+++|++.+++ .+..+.+|+
T Consensus 207 ~~~~~v~~S~~~H~S~~kaa~~lglg~~----------------~v~~vp~d~~g~~d~~~L~~~i~~~~~~g~~~~~vv 270 (522)
T TIGR03799 207 YDGLAILVSERGHYSLGKAADVLGIGRD----------------NLIAIKTDANNRIDVDALRDKCAELAEQNIKPLAIV 270 (522)
T ss_pred CCceEEEECCCchHHHHHHHHHcCCCcc----------------cEEEEEeCCCCcCCHHHHHHHHHHHHHCCCCcEEEE
Confidence 123455555556655544444443210 11222211 79999998863 222233444
Q ss_pred EcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccchhhccCC-CCchhhhh--hhcCCCCcEEEEEe
Q 011856 252 LEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGV-TPDLTTLG--KIIGGGLPVGAYGG 327 (476)
Q Consensus 252 ~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~-~pDi~t~s--K~lg~G~~iG~~~~ 327 (476)
......+.|.+.| +++|.++|++||+++++|-+|.|. ..........-|+ ..|.++++ |.+.+.+.+|+++.
T Consensus 271 ataGtt~tGaiDp----l~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gle~aDSit~d~HK~l~~P~g~G~llv 346 (522)
T TIGR03799 271 GVAGTTETGNIDP----LDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGIERADSVTIDAHKQLYVPMGAGMVLF 346 (522)
T ss_pred EEecCcCCCCcCC----HHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCchhCCEEEEChhhcCCcCcccEEEEE
Confidence 4444556899999 999999999999999999999765 2111111112344 56888765 87776677898877
Q ss_pred c-HHHHHhhcCCCCcc------c--cCCCCCcHHH-HHHHHHHHHHhcC---CCHHHHHHHHHHHHHHHHHHH
Q 011856 328 R-RDIMEMVAPAGPMY------Q--AGTLSGNPLA-MTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDA 387 (476)
Q Consensus 328 ~-~~i~~~l~~~~~~~------~--~~t~~~~~~~-~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~ 387 (476)
+ +++.+.+.....+. . ..++.++... .....++|+.+.. +.+.++..++.+++.+.|++.
T Consensus 347 r~~~~~~~~~~~~~Yl~~~~~~d~~~~~legsR~~~al~lw~aL~~lG~~G~~~ii~~~~~la~~l~~~L~~~ 419 (522)
T TIGR03799 347 KDPALMSAIEHHAEYILRKGSKDLGSHTLEGSRPGMAMLVYAGLHIIGRKGYELLIDQSIEKAKYFADLIQQQ 419 (522)
T ss_pred eCHHHHHHhccCcchhcCCCCCccccceeecCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 5 45655554311110 0 0011111111 1234456666544 556666777777777777653
No 336
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.46 E-value=1.5e-11 Score=121.36 Aligned_cols=307 Identities=12% Similarity=0.021 Sum_probs=178.4
Q ss_pred CcHHHHHHHHHHHHhc--CCCC------CCC---HHHHHHHHHHHhhCCC--CCeEEE-eCCHHHHHHHHHHHHHhccCC
Q 011856 116 ADDQVLAALGETMKKG--TSFG------APC---LLENVLAEMVISAVPS--IEMVRF-VNSGTEACMGVLRLARAFTGR 181 (476)
Q Consensus 116 ~~p~v~~a~~~~l~~~--~~~~------~~~---~~~~~la~~l~~~~~~--~e~v~~-~~sGseA~~~al~~ar~~~~~ 181 (476)
-+++|++|+...+.+. .+.+ ... +...+..+.+++++.. ..+++| .+||+.|+++++.. ....+
T Consensus 14 ~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea~~~n--l~~~g 91 (360)
T PRK05355 14 LPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAMVPMN--LLGGG 91 (360)
T ss_pred CCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHHHHHh--cCCCC
Confidence 4789999998887431 0011 112 5667788888888852 234554 58899999999884 23344
Q ss_pred ceEEEEeCCCCCCchhHHhh-cCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHH-HHhcCCCCeEEEEEcccCCCC
Q 011856 182 ERIIKFEGCYHGHADPFLVK-AGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALEN-LFENNKGEIAAIILEPVVGNS 259 (476)
Q Consensus 182 ~~ii~~~~~yhg~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~-~l~~~~~~~a~vi~ep~~~~~ 259 (476)
+++.....+.+|+...-+.. .|.. .....+...+. .+..++++ .+++ ++++|.+..+-+.+
T Consensus 92 ~~~l~i~~G~fg~r~~~~a~~~g~~-~~~~~~~~~g~-------------~~~~~~~~~~l~~---~~~~V~~th~eTst 154 (360)
T PRK05355 92 KKADYVDTGSWSKKAIKEAKKYGEV-NVAASSEDDGF-------------TYIPPLDEWQLSD---DAAYVHYTSNETID 154 (360)
T ss_pred CeEEEEECCHHHHHHHHHHHHhCCc-eEEecccccCC-------------CCCCChhhccCCC---CCCEEEEccCCCcc
Confidence 66777777776755433322 2321 11111110111 12233333 4543 56778888877778
Q ss_pred CcccCCHHHHHHHHHHHHHhCCEEEEecccc-CccccccchhhccCCCCchhhhh--hhcCCCCcEEEEEecHHHHHhhc
Q 011856 260 GFIAPKPDFLNAIRRITKENGALLIFDEVMT-GFRLAYGGAQEYFGVTPDLTTLG--KIIGGGLPVGAYGGRRDIMEMVA 336 (476)
Q Consensus 260 G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~r~g~~~~~~~~g~~pDi~t~s--K~lg~G~~iG~~~~~~~i~~~l~ 336 (476)
|.+.++ +++| ||+++|+|-+++ |- ...-.+.+ |++++| |++|. -.+|.+.+++++++.+.
T Consensus 155 Gv~~~~---i~~i------~g~l~vVDavss~g~---~~idv~~~----d~~~~ssqK~lgP-~Glg~l~~s~~~l~~~~ 217 (360)
T PRK05355 155 GTEFHE---LPDT------GDVPLVADMSSDILS---RPIDVSKF----GLIYAGAQKNIGP-AGLTIVIVREDLLGRAL 217 (360)
T ss_pred eEecCc---cccc------CCCcEEEEcCccccC---ccCCHHHc----cEEEEeccccccC-CceEEEEECHHHHhhcc
Confidence 888731 5544 899999999995 11 11111222 455544 99862 22899999999988776
Q ss_pred CC-CCc-------ccc-CCCCCcHHHHHHHHHHHHHhcCC----CHHHHHHHHHHHHHHHHHHHhhhcCCceEe-eeece
Q 011856 337 PA-GPM-------YQA-GTLSGNPLAMTAGIHTLKRLKEP----GTYEYLNKITGELTQGIIDAGKKAGHAICG-GYISG 402 (476)
Q Consensus 337 ~~-~~~-------~~~-~t~~~~~~~~aaa~aal~~~~~~----~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v-~~~g~ 402 (476)
+. ..+ ... ..++.|.....+..++|+.+.+. ...++.+++.+++++.|+++.. +...... ...+.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~~-~~~~~~~~~rs~~ 296 (360)
T PRK05355 218 PSIPSMLDYKTHADNDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDSSDF-YRNPVAPEDRSRM 296 (360)
T ss_pred cCCChHHHHHHHHhcCCccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCC-cccCCChhhcCCc
Confidence 41 100 001 12345566667777888887654 4455666666666666666431 0000000 01123
Q ss_pred eEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCC--CcceEEe--CCCcHHHHHHHHHHHHHHHH
Q 011856 403 MFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ--FEAGFTS--LAHSSDDIQHTITAAEKVKM 472 (476)
Q Consensus 403 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~--~~~~~~~--~~~t~e~i~~~~~~l~~~~~ 472 (476)
.+.+.+. +.....++...+.++|+.+..+. ...+|++ ..+|.+|||.+++.|++++.
T Consensus 297 v~sf~~~-------------~~~~~~~~~~~~~~~Gi~~~~~~~~~g~vRiS~~~~nt~eei~~l~~~l~~~~~ 357 (360)
T PRK05355 297 NVPFTLA-------------DEELDKKFLAEAKAAGLVGLKGHRSVGGMRASIYNAMPLEGVQALVDFMKEFER 357 (360)
T ss_pred EEEEEcC-------------ChHHHHHHHHHHHHCCCcccCCCCccCcEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 3444432 22223566678889999985543 2457876 45579999999999999765
No 337
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.45 E-value=3.7e-11 Score=127.54 Aligned_cols=300 Identities=12% Similarity=0.130 Sum_probs=172.0
Q ss_pred HHHHHHHHHHHhhCCCCCeEEEeC-CHHHHHHHHHHHHHhc------cCCceEEEEeCCCCCCchhHHhhcCCCCccCCC
Q 011856 139 LLENVLAEMVISAVPSIEMVRFVN-SGTEACMGVLRLARAF------TGRERIIKFEGCYHGHADPFLVKAGSGVATLGL 211 (476)
Q Consensus 139 ~~~~~la~~l~~~~~~~e~v~~~~-sGseA~~~al~~ar~~------~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~ 211 (476)
+...+|.+++++++ +.+.+-+-+ ||+.+..+++...|.| ++|+ +++...+-|+.....+...|..+..++.
T Consensus 543 q~i~elq~~l~eLt-Gmd~~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~-~vLIp~saHgtNpasa~~~GieVv~Vp~ 620 (954)
T PRK12566 543 AMIDELEAWLCAIT-GFDAICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRD-ICLIPSSAHGTNPASAQMAGMRVVIVEC 620 (954)
T ss_pred HHHHHHHHHHHHHH-CCCeEeecCCchHHHHHHHHHHHHHHHHhcCCCCCC-EEEecccccccCHHHHHHCCCEEEEecc
Confidence 34457888888888 777766655 8898888888776664 3344 4555557777665555545554433222
Q ss_pred CCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-
Q 011856 212 PDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT- 290 (476)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~- 290 (476)
. ..|. -|+++|++.++++.+++++|.+..++..++...+ +++|.++|+++|+++++|-++.
T Consensus 621 D-~~G~-------------iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e~~----V~eI~~iah~~Galv~vDgA~~~ 682 (954)
T PRK12566 621 D-PDGN-------------VDLDDLKAKAAAAGDRLSCLMITYPSTHGVYEEG----IREICEVVHQHGGQVYMDGANLN 682 (954)
T ss_pred C-CCCC-------------cCHHHHHHHhhccCCCEEEEEEEecCcCceecch----HHHHHHHHHHcCCEEEEEeeChh
Confidence 1 1121 1899999999866668888777665554544444 9999999999999999999884
Q ss_pred CccccccchhhccCCCCchhhhh--hhcC----CC-CcEEEEEecHHHHHhhcCCC------C-cccc---CCCCCcHHH
Q 011856 291 GFRLAYGGAQEYFGVTPDLTTLG--KIIG----GG-LPVGAYGGRRDIMEMVAPAG------P-MYQA---GTLSGNPLA 353 (476)
Q Consensus 291 g~r~g~~~~~~~~g~~pDi~t~s--K~lg----~G-~~iG~~~~~~~i~~~l~~~~------~-~~~~---~t~~~~~~~ 353 (476)
+. ...-... .+..|+++++ |.|+ +| .-+|.+.+++++...+.... + .... ....++.+.
T Consensus 683 a~--~~l~~Pg--~~GADi~~~s~HKtf~~P~G~GGP~vG~iav~~~L~pfLp~~P~~d~~G~~~r~ga~S~~~~gsa~~ 758 (954)
T PRK12566 683 AQ--VGLARPA--DIGADVSHMNLHKTFCIPHGGGGPGMGPIGVRAHLAPFVANHPVVPVEGPDPNNGAVSAAPWGSASI 758 (954)
T ss_pred hc--cCCCChh--hcCCCEEEecCCcccCcCccCCCCccchhhhhhhhhhhccCCCCcCCCCCCCCCCceeecccchHHH
Confidence 22 1010011 2335887655 9875 23 44777777776665554210 0 1111 112233333
Q ss_pred HHHHHHHHHHhcCCCHHHHHH----HHHHHHHHHHHHHhhhcCCceEeeeece-eEEEEEecCCCcCchhhcccchHHHH
Q 011856 354 MTAGIHTLKRLKEPGTYEYLN----KITGELTQGIIDAGKKAGHAICGGYISG-MFGFFFTEGPVYNFEDAKKSETTKFA 428 (476)
Q Consensus 354 ~aaa~aal~~~~~~~~~~~~~----~~~~~l~~~L~~~~~~~~~~~~v~~~g~-~~~i~~~~~~~~~~~~~~~~~~~~~~ 428 (476)
..++...+..+..+ +.+.. .+..|+.++|.+. ++.... ...+. +--+.+...+... .......
T Consensus 759 l~~A~~Yi~~lG~e--Lk~aa~~ailnAnYla~rL~~~---~~v~~~-~~~~~~~hEfii~~~~l~~------~~g~~~~ 826 (954)
T PRK12566 759 LPISWMYIAMMGPQ--LADASEVAILSANYLANQLGGA---FPVLYR-GRNERVAHECILDLRPLKA------QTGISEE 826 (954)
T ss_pred HHHHHHHHHHHCHH--HHHHHHHHHHHHHHHHHHhHhh---CCCCcC-CCCCCeeeEEEEEcccccc------ccCCCHH
Confidence 44444444444333 33333 4777888888762 333221 11111 1111111110000 0001125
Q ss_pred HHHHHHHHCCeEeccCC---CcceEE--eCCCcHHHHHHHHHHHHHHHHHh
Q 011856 429 RFYRGMLEEGVYFAPSQ---FEAGFT--SLAHSSDDIQHTITAAEKVKMRF 474 (476)
Q Consensus 429 ~~~~~l~~~Gv~~~~~~---~~~~~~--~~~~t~e~i~~~~~~l~~~~~~~ 474 (476)
++.+.|++.||...... .+.+++ .-..+++|||+++++|+.+.+++
T Consensus 827 dvakRL~d~Gihapt~~fPv~~~LmIepTE~eskeEIDrf~eAL~~I~~e~ 877 (954)
T PRK12566 827 DVAKRLMDYGFHAPTMSFPVPGTLMVEPTESESKAELDRFVEAMLSIRAEI 877 (954)
T ss_pred HHHHHHHHCCcEEeEEeeccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHH
Confidence 68888889898754321 234555 45679999999999999887764
No 338
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.45 E-value=4.8e-11 Score=106.64 Aligned_cols=299 Identities=17% Similarity=0.199 Sum_probs=182.2
Q ss_pred HHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCC
Q 011856 143 VLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGAT 222 (476)
Q Consensus 143 ~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 222 (476)
.+-+.|++++ +.|.+.+|++.-||-.+++. ++.++++.++.|+..|=.+..+....|..+...+ ..+.|
T Consensus 65 ~F~~dlaeFl-g~D~~R~t~GARe~KfavMh---al~~~gd~vV~D~~aHYttyvAAEragl~v~eVp---~tg~P---- 133 (382)
T COG1103 65 DFLEDLAEFL-GMDEVRVTAGAREAKFAVMH---ALCKEGDWVVVDSLAHYTTYVAAERAGLNVAEVP---NTGYP---- 133 (382)
T ss_pred HHHHHHHHHh-CCceeeecccchhhHHHHHH---HhccCCCEEEEcCcchHHHHHHHHhcCCeEEecC---CCCCC----
Confidence 3444444444 89999999999999999998 7788999999999998888777777777665432 22222
Q ss_pred Cceeecc-CCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCccccccchhh
Q 011856 223 YETLTAP-FNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQE 301 (476)
Q Consensus 223 ~~~~~~~-~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~ 301 (476)
.+.+. -+-.+.+|+..++.++.+++.++..+-++-|.+.. -+++.++|++||++++..-+|+ .|.+ ...
T Consensus 134 --ey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~D----akkva~ic~e~gvPlllN~AYt---~Grm-pvs 203 (382)
T COG1103 134 --EYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLAD----AKKVAKICREYGVPLLLNCAYT---VGRM-PVS 203 (382)
T ss_pred --ceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCchh----hHHHHHHHHHcCCceEeeccee---eccc-ccc
Confidence 12221 11133445555555566888888888888888877 8899999999999999999996 2221 122
Q ss_pred ccCCCCchhhhh--hhcCCCCcEEEEEecHHHHHhhcC-CCC-------ccccCCCCCcHHHHHHHHHHHHHhc-C-CCH
Q 011856 302 YFGVTPDLTTLG--KIIGGGLPVGAYGGRRDIMEMVAP-AGP-------MYQAGTLSGNPLAMTAGIHTLKRLK-E-PGT 369 (476)
Q Consensus 302 ~~g~~pDi~t~s--K~lg~G~~iG~~~~~~~i~~~l~~-~~~-------~~~~~t~~~~~~~~aaa~aal~~~~-~-~~~ 369 (476)
.-.+.+|.++-| |++++.-|+|.+..+++..+.+-. .++ -..+-|..+-|+... +|.+-... + ..|
T Consensus 204 ~ke~g~DFiVgSGHKsmAAs~PiGvl~~~eE~ae~V~r~Sg~~~~~KEvellGCT~rGapivTl--mASfP~V~eRVkrW 281 (382)
T COG1103 204 GKEIGADFIVGSGHKSMAASAPIGVLAMSEEWAEIVLRRSGRAFPKKEVELLGCTVRGAPIVTL--MASFPHVVERVKRW 281 (382)
T ss_pred ccccCCCEEEecCccchhccCCeeEEeehhHHHHHHHhhcccccccceeeeecccccCchHHHH--HhcCHHHHHHHHHH
Confidence 334567877654 899866699999999998776532 212 012333334443322 22222111 1 233
Q ss_pred HHHHHHHHHHHHHHHHHHh--hhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeE-eccCCC
Q 011856 370 YEYLNKITGELTQGIIDAG--KKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVY-FAPSQF 446 (476)
Q Consensus 370 ~~~~~~~~~~l~~~L~~~~--~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~-~~~~~~ 446 (476)
-+.+ +..+++.+.|+++. .+.+.. +...-++-++- +. |...........--+++.|.++||. +.|+..
T Consensus 282 deEv-~kaR~fv~elEkigg~~qlG~r---Pk~HdLm~Fet--p~---f~eIakk~~r~gyFlY~ELK~RgI~GI~~G~T 352 (382)
T COG1103 282 DEEV-EKARWFVAELEKIGGVKQLGER---PKNHDLMKFET--PV---FHEIAKKHKRKGYFLYEELKKRGIHGIQPGQT 352 (382)
T ss_pred HHHH-HHHHHHHHHHHHhhhHHHhCCC---CcccceeeecC--ch---HHHHHHhCcCCceeeHHHHHhcCccccccCce
Confidence 3333 45667777787764 122211 11111112221 10 0000000000112357888999986 556555
Q ss_pred cceEEe-CCCcHHHHHHHHHHHHHHHHH
Q 011856 447 EAGFTS-LAHSSDDIQHTITAAEKVKMR 473 (476)
Q Consensus 447 ~~~~~~-~~~t~e~i~~~~~~l~~~~~~ 473 (476)
..+-++ +..+.|+++..++++++++++
T Consensus 353 k~~K~svyGl~~Eqve~V~~afkeI~ek 380 (382)
T COG1103 353 KYFKLSVYGLSWEQVEYVVDAFKEIAEK 380 (382)
T ss_pred eEEEEEeecCCHHHHHHHHHHHHHHHHh
Confidence 555554 788999999999999999875
No 339
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.42 E-value=7.4e-11 Score=115.83 Aligned_cols=310 Identities=13% Similarity=0.028 Sum_probs=177.1
Q ss_pred CcHHHHHHHHHHHHhcC--CCCC------CC---HHHHHHHHHHHhhCCC--CCeEEEeC-CHHHHHHHHHHHHHhccCC
Q 011856 116 ADDQVLAALGETMKKGT--SFGA------PC---LLENVLAEMVISAVPS--IEMVRFVN-SGTEACMGVLRLARAFTGR 181 (476)
Q Consensus 116 ~~p~v~~a~~~~l~~~~--~~~~------~~---~~~~~la~~l~~~~~~--~e~v~~~~-sGseA~~~al~~ar~~~~~ 181 (476)
.+..|++++.+.+.+.. +.+. .. +...++.+.+.+++.. ..+|+|++ |||+|+++++... ..+.
T Consensus 3 ~p~~v~~~~~~~~~~~~~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl--~~~~ 80 (349)
T TIGR01364 3 LPEEVLEQAQKELLNFNGTGMSVMEISHRSKEFEAVANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNL--LAEG 80 (349)
T ss_pred CCHHHHHHHHHHHhCccCCCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhc--CCCC
Confidence 35688888888887421 1111 12 5566777888888752 34677765 5999999999842 2245
Q ss_pred ceEEEEeCCCCCCchhHHhhc-CCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCC
Q 011856 182 ERIIKFEGCYHGHADPFLVKA-GSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSG 260 (476)
Q Consensus 182 ~~ii~~~~~yhg~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G 260 (476)
+++++...+.+|....-+... |. +.....+. ..++.+..++++.... +++++|.+..+-+.+|
T Consensus 81 ~~~l~i~~G~fg~r~~~~a~~~g~-~~~~~~~~-------------~~~~~~~~~~~~~~~~--~~~~~v~~th~ETstG 144 (349)
T TIGR01364 81 KVADYIVTGAWSKKAAKEAKKYGV-VNVVASGK-------------EGNYTKIPDPSTWEIS--EDAAYVHYCANETIHG 144 (349)
T ss_pred CeEEEEECCHHHHHHHHHHHHhCC-cEEEeccc-------------cCCCCCCCCHHhcCCC--CCCCEEEEcCCCCccc
Confidence 677777777777554333222 33 22111110 0112222233322222 2577777777777788
Q ss_pred cccCCHHHHHHHHHHHHHhCCEEEEeccccCccccccchhhccCCCCchhhh--hhhcCCCCcEEEEEecHHHHHhhcCC
Q 011856 261 FIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTL--GKIIGGGLPVGAYGGRRDIMEMVAPA 338 (476)
Q Consensus 261 ~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pDi~t~--sK~lg~G~~iG~~~~~~~i~~~l~~~ 338 (476)
...+ ++++.+++++++|-+++ + .+...-.+.+ |++++ -|++|. -.+|.+..++++++.+.+.
T Consensus 145 v~~~---------~l~~~~~~l~iVDavss-~-g~~~id~~~~----d~~~~ssqK~lgP-~Glg~l~~s~~~~~~~~~~ 208 (349)
T TIGR01364 145 VEFR---------ELPDVKNAPLVADMSSN-I-LSRPIDVSKF----GLIYAGAQKNIGP-AGLTVVIVRKDLLGRASRI 208 (349)
T ss_pred Eecc---------eecccCCCeEEEEcccc-c-cCccCCHHHc----cEEEEecccccCC-CceEEEEECHHHHhhcccC
Confidence 7654 66777899999999995 1 0011111222 35544 499962 2289999999998876542
Q ss_pred CC-cc-------ccCCC-CCcHHHHHHHHHHHHHhcCC----CHHHHHHHHHHHHHHHHHHHhhhcCCceEeeee-ceeE
Q 011856 339 GP-MY-------QAGTL-SGNPLAMTAGIHTLKRLKEP----GTYEYLNKITGELTQGIIDAGKKAGHAICGGYI-SGMF 404 (476)
Q Consensus 339 ~~-~~-------~~~t~-~~~~~~~aaa~aal~~~~~~----~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~-g~~~ 404 (476)
.+ +. ...++ +.|.....+..++|+.+.+. ...++.+++.+++++.|+++..-.....+.... ...+
T Consensus 209 ~~~~~~~~~~~~~~~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~ 288 (349)
T TIGR01364 209 TPSMLNYKIHAENDSMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNV 288 (349)
T ss_pred CCCcchHHHHHhcCCCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEE
Confidence 11 00 01222 44566666777888887643 345555666666666666652100010000011 2334
Q ss_pred EEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCC--CcceEEe--CCCcHHHHHHHHHHHHHHHH
Q 011856 405 GFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ--FEAGFTS--LAHSSDDIQHTITAAEKVKM 472 (476)
Q Consensus 405 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~--~~~~~~~--~~~t~e~i~~~~~~l~~~~~ 472 (476)
.+.+.+ .....++...+.++|+.+.++. ...+|++ ..+|+||||.++++|+++.+
T Consensus 289 sf~~~~-------------~~~~~~~~~~~~~~Gi~~~~~~~~~g~vRvS~~~~nt~edid~l~~al~~~~~ 347 (349)
T TIGR01364 289 VFTLGN-------------EELEKRFLKEAEERGLVSLKGHRSVGGMRASIYNAMPLEGVQALVDFMKEFQK 347 (349)
T ss_pred EEecCC-------------hhHhHHHHHHHHHCCCcccCCccccCeeEEECcCCCCHHHHHHHHHHHHHHHH
Confidence 444321 1122566678889999665553 2467776 45589999999999998765
No 340
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.42 E-value=2.6e-11 Score=114.26 Aligned_cols=275 Identities=16% Similarity=0.132 Sum_probs=163.0
Q ss_pred EEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHH
Q 011856 159 RFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALEN 238 (476)
Q Consensus 159 ~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~ 238 (476)
+-+.|||-|+..+......+.++..|.+.++++-. +.......|..+..+++-+...- . -|.+.+-+
T Consensus 98 ~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~N-H~~If~~aGl~v~~Y~Yyd~~~~---------~---~df~~mla 164 (396)
T COG1448 98 VQTLGGTGALRVAADFLARFFPDATVWISDPTWPN-HKAIFEAAGLEVETYPYYDAETK---------G---LDFDGMLA 164 (396)
T ss_pred eecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHh-HHHHHHhcCCceeeeeccccccc---------c---ccHHHHHH
Confidence 45789999999999977677778888888888754 44555555665544332211110 0 17788877
Q ss_pred HHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCccccccchhhcc------CCCCchh--
Q 011856 239 LFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYF------GVTPDLT-- 310 (476)
Q Consensus 239 ~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~------g~~pDi~-- 310 (476)
.|++.+.....++-.+-+|++|.- ++.+.|++|.++.++.+.+-++|=+|-||..| ...+.+ ...+.++
T Consensus 165 ~L~~a~~~~vvLLH~CcHNPTG~D-~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~G--leeDa~~lR~~a~~~~~~lva 241 (396)
T COG1448 165 DLKTAPEGSVVLLHGCCHNPTGID-PTEEQWQELADLIKERGLIPFFDIAYQGFADG--LEEDAYALRLFAEVGPELLVA 241 (396)
T ss_pred HHHhCCCCCEEEEecCCCCCCCCC-CCHHHHHHHHHHHHHcCCeeeeehhhhhhccc--hHHHHHHHHHHHHhCCcEEEE
Confidence 787665555555556666667754 55566999999999999999999999999333 111222 1223333
Q ss_pred -hhhhhcC-CCCcEEEE--Ee-cHHHHHhhcCCCCccccCCCCCcHHHHHHHHH-HHH--Hh-----cC-CCHHHHHHHH
Q 011856 311 -TLGKIIG-GGLPVGAY--GG-RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIH-TLK--RL-----KE-PGTYEYLNKI 376 (476)
Q Consensus 311 -t~sK~lg-~G~~iG~~--~~-~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~a-al~--~~-----~~-~~~~~~~~~~ 376 (476)
+|||.|| =|-|+|++ ++ +.+..+.+...-+...-++|+.+|--=+...+ .|+ .+ .+ +++++++.++
T Consensus 242 ~S~SKnfgLYgERVGa~~vva~~~~~a~~v~sqlk~~iR~~ySnPP~~Ga~vva~IL~~p~Lra~W~~El~~Mr~Ri~~m 321 (396)
T COG1448 242 SSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKAIIRTNYSNPPAHGAAVVATILNNPELRAEWEQELEEMRQRILEM 321 (396)
T ss_pred ehhhhhhhhhhhccceeEEEeCCHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 6999999 58899988 22 33444433311112234456544432222222 221 01 11 4556677777
Q ss_pred HHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCCcceEEe-CCC
Q 011856 377 TGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFTS-LAH 455 (476)
Q Consensus 377 ~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~~-~~~ 455 (476)
+..|.+.|++......+..-....|+|...-+. .+++.+.--+.||++..++ |++ ...
T Consensus 322 R~~lv~~L~~~~~~~~f~~i~~Q~GMFsy~Gls-----------------~~QV~rLree~~IY~v~sG----Ri~vaGl 380 (396)
T COG1448 322 RQALVDALKALGAPRNFDFIISQRGMFSYTGLS-----------------PEQVDRLREEFGIYLVASG----RINVAGL 380 (396)
T ss_pred HHHHHHHHHhhCCCcccchHhhcCceeecCCCC-----------------HHHHHHHHHhccEEEecCC----eeeeccC
Confidence 777777777654332222222334433211111 1334334446799988775 664 466
Q ss_pred cHHHHHHHHHHHHHH
Q 011856 456 SSDDIQHTITAAEKV 470 (476)
Q Consensus 456 t~e~i~~~~~~l~~~ 470 (476)
++..++.+.++|.++
T Consensus 381 ~~~ni~~va~ai~~v 395 (396)
T COG1448 381 NTSNIDYVAKAIAAV 395 (396)
T ss_pred ChhhHHHHHHHHHhh
Confidence 889999999888765
No 341
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.41 E-value=3.9e-10 Score=122.51 Aligned_cols=344 Identities=14% Similarity=0.094 Sum_probs=189.1
Q ss_pred CEEEecccChhhccCCCCcH-HHHHHHHHHHHhc--CCCC-C-----CCHHHHHHHHHHHhhCC-CC-C-eEEEeCCHHH
Q 011856 99 NEYIDYVGSWGPAIIGHADD-QVLAALGETMKKG--TSFG-A-----PCLLENVLAEMVISAVP-SI-E-MVRFVNSGTE 166 (476)
Q Consensus 99 ~~~iD~~~~~~~~~lG~~~p-~v~~a~~~~l~~~--~~~~-~-----~~~~~~~la~~l~~~~~-~~-e-~v~~~~sGse 166 (476)
..|+|..+. +..+| .|.+++.+.+... ...+ + ..+..++..+.+++++. .. + .|+||+|+|+
T Consensus 35 ~iYLD~Aat------t~~~~~~V~~~~~~~~~~~~~np~s~~~~s~~~~~~~e~aR~~ia~~lga~~~~~~VvFtsnaT~ 108 (805)
T PLN02724 35 VVYLDHAGA------TLYSESQLEAALADFSSNVYGNPHSQSDSSMRSSDTIESARQQVLEYFNAPPSDYACVFTSGATA 108 (805)
T ss_pred CEeEeCCCC------CCCCHHHHHHHHHHHHhhccCCCCcCcchhhhHHHHHHHHHHHHHHHhCCCccceEEEEeCChHH
Confidence 578887655 12234 4555554544431 1111 1 13455677788888886 33 3 5899999999
Q ss_pred HHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhh---cCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHh--
Q 011856 167 ACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVK---AGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFE-- 241 (476)
Q Consensus 167 A~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~-- 241 (476)
|+..+.... .+.+++.||+. ..-|......... .|..+...+.+...+.+..... .+.. +.++|++.++
T Consensus 109 alnlva~~l-~~~~gd~Iv~t-~~eH~svl~~~~~a~~~G~~v~~v~~~~~~~~~~~~~g-~~~~---~~~~l~~~~~~~ 182 (805)
T PLN02724 109 ALKLVGETF-PWSSESHFCYT-LENHNSVLGIREYALEKGAAAIAVDIEEAANQPTNSQG-SVVV---KSRGLQRRNTSK 182 (805)
T ss_pred HHHHHHHHC-CCCCCCeEEEe-eccccchHHHHHHHHHcCCeEEeccchhcccccccccc-cccc---chhhhhhhhhhh
Confidence 999887632 23455666664 4555544443322 1322222211100000000000 0000 1244555431
Q ss_pred --c---CCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHh--------CCEEEEeccccCccccccchhhccCCCCc
Q 011856 242 --N---NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKEN--------GALLIFDEVMTGFRLAYGGAQEYFGVTPD 308 (476)
Q Consensus 242 --~---~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~--------g~llI~DEv~~g~r~g~~~~~~~~g~~pD 308 (476)
. ..+.+++|.+..+.+.+|.+.| ++.+..+++.. ++++++|-+|+ .|. ...+.-.+.+|
T Consensus 183 l~~~~~~~~~t~LVa~~~vsN~tG~i~p----i~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~---~g~-~piDv~~~~~D 254 (805)
T PLN02724 183 LQKREDDGEAYNLFAFPSECNFSGAKFP----LDLVKLIKDNQHSNFSKSGRWMVLLDAAKG---CGT-SPPDLSRYPAD 254 (805)
T ss_pred hccccccCCCcceEEEEccccCCCCcCC----HHHHHHHHHhcccccccCcceEEEeehhhh---cCC-CCCChhhcCCC
Confidence 1 1235678888888888999999 77665555432 36899999994 111 11122234579
Q ss_pred hhhhh--hhcCCCCcEEEEEecHHHHHhhcCC---C-Cc--------cc---------cCCCCCcHHHHHHHHHHHHHhc
Q 011856 309 LTTLG--KIIGGGLPVGAYGGRRDIMEMVAPA---G-PM--------YQ---------AGTLSGNPLAMTAGIHTLKRLK 365 (476)
Q Consensus 309 i~t~s--K~lg~G~~iG~~~~~~~i~~~l~~~---~-~~--------~~---------~~t~~~~~~~~aaa~aal~~~~ 365 (476)
++++| |.+|+-..+|++++++++.+.+.+. + .. ++ +-.-+.|.++.++..++|+.+.
T Consensus 255 fl~~S~HK~~GgP~G~G~L~vr~~~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~aal~~l~ 334 (805)
T PLN02724 255 FVVVSFYKIFGYPTGLGALLVRRDAAKLLKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALRHGFKLLN 334 (805)
T ss_pred EEEEecceeccCCCCceEEEEehhhhhhhcCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHHHHHHHHH
Confidence 88766 9877423489999999888776631 0 00 00 0011345666677777888776
Q ss_pred C---CCHHHHHHHHHHHHHHHHHHHhhhcC--CceE---------eeeeceeEEEEEecCCCcCchhhcccchHHHHHHH
Q 011856 366 E---PGTYEYLNKITGELTQGIIDAGKKAG--HAIC---------GGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFY 431 (476)
Q Consensus 366 ~---~~~~~~~~~~~~~l~~~L~~~~~~~~--~~~~---------v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (476)
+ +...++.+++.+++.+.|.++....+ .+.- ....+.++.|.+.+.....+ ....+.
T Consensus 335 ~ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~~~~v---------~~~~v~ 405 (805)
T PLN02724 335 RLTISAIAMHTWALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRADGSWV---------GHREVE 405 (805)
T ss_pred HhChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCcccccCEEEEEEEcCCCCEe---------CHHHHH
Confidence 5 56778888888888888887631111 1100 11245677777654221111 012233
Q ss_pred HHHHHCCeEeccCCC---------------------------------------cceEEe--CCCcHHHHHHHHHHHHHH
Q 011856 432 RGMLEEGVYFAPSQF---------------------------------------EAGFTS--LAHSSDDIQHTITAAEKV 470 (476)
Q Consensus 432 ~~l~~~Gv~~~~~~~---------------------------------------~~~~~~--~~~t~e~i~~~~~~l~~~ 470 (476)
..+-++||.++.+.. ..+|++ ...|.+|||++++.|++.
T Consensus 406 ~l~~~~gI~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~~ 485 (805)
T PLN02724 406 KLASLSGIQLRTGCFCNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFIISS 485 (805)
T ss_pred HHHHhcCcEEeeccccCchHHHHHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcCccCCHHHHHHHHHHHHHH
Confidence 333455776644311 235665 567999999999999987
Q ss_pred H
Q 011856 471 K 471 (476)
Q Consensus 471 ~ 471 (476)
+
T Consensus 486 ~ 486 (805)
T PLN02724 486 F 486 (805)
T ss_pred h
Confidence 5
No 342
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.40 E-value=4.5e-11 Score=120.25 Aligned_cols=157 Identities=18% Similarity=0.142 Sum_probs=105.9
Q ss_pred CCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhH---HhhcCCCCccCCCCC
Q 011856 137 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPF---LVKAGSGVATLGLPD 213 (476)
Q Consensus 137 ~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~---~~~~g~~~~~~~~~~ 213 (476)
..+...++++.++++. +.+..++++||+.|+.+++... ...+++||+....|.+..... +...|.
T Consensus 67 ~~pt~~~le~~la~l~-g~~~~v~fsSG~~Ai~~al~~l--l~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi--------- 134 (437)
T PRK05613 67 TNPTVEALENRIASLE-GGVHAVAFASGQAAETAAILNL--AGAGDHIVTSPRLYGGTETLFLVTLNRLGI--------- 134 (437)
T ss_pred cChHHHHHHHHHHHHh-CCCeEEEeCCHHHHHHHHHHHh--cCCCCEEEECCCccHHHHHHHHHHHHhcCe---------
Confidence 4566778888888887 4578888888999999888732 345677887766676642211 111121
Q ss_pred CCCCCCCCCCceeecc-CCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc
Q 011856 214 SPGVPKGATYETLTAP-FNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF 292 (476)
Q Consensus 214 ~~~~~~~~~~~~~~~~-~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~ 292 (476)
++..++ .+|++++++.++. ++++|++|...++.|.+.+ +++|.++|+++|+++|+|.++..
T Consensus 135 ----------~v~~vd~~~d~e~l~~~l~~---~tk~V~~e~~~Np~~~v~d----i~~I~~la~~~gi~livD~t~a~- 196 (437)
T PRK05613 135 ----------EVTFVENPDDPESWQAAVQP---NTKAFFGETFANPQADVLD----IPAVAEVAHRNQVPLIVDNTIAT- 196 (437)
T ss_pred ----------EEEEECCCCCHHHHHHhCCc---cCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCeEEEECCCcc-
Confidence 233332 3478999998874 5778888887777788888 99999999999999999999942
Q ss_pred cccccchhhccCCCCchh--hhhhhcCC-CCcEEEEEe
Q 011856 293 RLAYGGAQEYFGVTPDLT--TLGKIIGG-GLPVGAYGG 327 (476)
Q Consensus 293 r~g~~~~~~~~g~~pDi~--t~sK~lg~-G~~iG~~~~ 327 (476)
+.......+| .|++ ++.|.++| |--+|+++.
T Consensus 197 --g~~~~p~~~G--aDivv~S~~K~l~G~gd~~gG~vv 230 (437)
T PRK05613 197 --AALVRPLELG--ADVVVASLTKFYTGNGSGLGGVLI 230 (437)
T ss_pred --ccccChHHhC--CCEEEeeccceecCCCcceeEEEE
Confidence 1111111234 4776 46699886 544555533
No 343
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.39 E-value=4e-11 Score=116.82 Aligned_cols=235 Identities=19% Similarity=0.167 Sum_probs=149.6
Q ss_pred CHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCC
Q 011856 138 CLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGV 217 (476)
Q Consensus 138 ~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~ 217 (476)
++....|.+.++++- +.+..+.++||..|+..++.. ....+++|+..+..|.+....+...... .++
T Consensus 62 nPT~~~lE~~~a~LE-g~~~~~afsSGmaAI~~~~l~--ll~~GD~vl~~~~~YG~t~~~~~~~l~~----------~gi 128 (396)
T COG0626 62 NPTRDALEEALAELE-GGEDAFAFSSGMAAISTALLA--LLKAGDHVLLPDDLYGGTYRLFEKILQK----------FGV 128 (396)
T ss_pred CccHHHHHHHHHHhh-CCCcEEEecCcHHHHHHHHHH--hcCCCCEEEecCCccchHHHHHHHHHHh----------cCe
Confidence 555677888887776 678899999999999998773 2344788888888887754433322111 111
Q ss_pred CCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccccc
Q 011856 218 PKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYG 297 (476)
Q Consensus 218 ~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~ 297 (476)
++..++..+.+.+++.+.+ +++++|++|++-|+...+.. +++|.++|+++|+++|+|.++.. .
T Consensus 129 ------~~~~~d~~~~~~~~~~~~~--~~tk~v~lEtPsNP~l~v~D----I~~i~~~A~~~g~~vvVDNTfat-----P 191 (396)
T COG0626 129 ------EVTFVDPGDDEALEAAIKE--PNTKLVFLETPSNPLLEVPD----IPAIARLAKAYGALVVVDNTFAT-----P 191 (396)
T ss_pred ------EEEEECCCChHHHHHHhcc--cCceEEEEeCCCCccccccc----HHHHHHHHHhcCCEEEEECCccc-----c
Confidence 3444444456666666653 37999999999888888888 99999999999999999999952 1
Q ss_pred chhhccCCCCchh--hhhhhcCCC--CcEEEEEecH-HHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHHHH
Q 011856 298 GAQEYFGVTPDLT--TLGKIIGGG--LPVGAYGGRR-DIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYEY 372 (476)
Q Consensus 298 ~~~~~~g~~pDi~--t~sK~lg~G--~~iG~~~~~~-~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~ 372 (476)
..+..+..-.||+ +.+|.++|. .-.|.++++. ++.+.+... .....++ ..+|.-+-..+..|+-+ .-..++
T Consensus 192 ~~q~PL~~GaDIVvhSaTKyl~GHsDvl~G~v~~~~~~~~~~~~~~-~~~~~G~-~l~p~dA~l~lRGlkTL--~~Rm~~ 267 (396)
T COG0626 192 VLQRPLELGADIVVHSATKYLGGHSDVLGGVVLTPNEELYELLFFA-QRANTGA-VLSPFDAWLLLRGLRTL--ALRMER 267 (396)
T ss_pred cccChhhcCCCEEEEeccccccCCcceeeeEEecChHHHHHHHHHH-HHhhcCC-CCCHHHHHHHHhccchH--HHHHHH
Confidence 1223333345777 688999974 4466566554 455544210 0001122 34555555444444322 334456
Q ss_pred HHHHHHHHHHHHHHHhhhcCCceE------------------eeeeceeEEEEEec
Q 011856 373 LNKITGELTQGIIDAGKKAGHAIC------------------GGYISGMFGFFFTE 410 (476)
Q Consensus 373 ~~~~~~~l~~~L~~~~~~~~~~~~------------------v~~~g~~~~i~~~~ 410 (476)
..++...+.+.|++ ++.+.. ..+.|.|+.|++.+
T Consensus 268 ~~~nA~~IA~~L~~----~p~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~ 319 (396)
T COG0626 268 HNENALKIAEFLAD----HPKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKN 319 (396)
T ss_pred HHHHHHHHHHHHhc----CCCeEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCC
Confidence 66666666666665 222211 22588999999964
No 344
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.39 E-value=3.8e-13 Score=127.61 Aligned_cols=194 Identities=23% Similarity=0.209 Sum_probs=119.5
Q ss_pred CcHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCC--
Q 011856 116 ADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHG-- 193 (476)
Q Consensus 116 ~~p~v~~a~~~~l~~~~~~~~~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg-- 193 (476)
.+|++.+++.+. ..+...+..++...+|.+++++.+ +.+.++|++||+.||..+++... .+.+.||.-+ ..|-
T Consensus 7 ~~~~m~~a~~~a-~~gd~~Yg~D~~~~~l~~~i~~l~-g~e~a~f~~sGT~An~~al~~~~--~~~~~vi~~~-~aHi~~ 81 (290)
T PF01212_consen 7 PTPAMLEAMAAA-NVGDDAYGEDPTTARLEERIAELF-GKEAALFVPSGTMANQLALRAHL--RPGESVICAD-TAHIHF 81 (290)
T ss_dssp S-HHEEHHHHHT-TSB-CCTTSSHHHHHHHHHHHHHH-TSSEEEEESSHHHHHHHHHHHHH--HTTEEEEEET-TEHHHH
T ss_pred CCHHHHHHHHcc-ccCCcccCCChhHHHHHHHHHHHc-CCCEEEEeCCCChHHHHHHHHHH--hcCCceeccc-cceeee
Confidence 689999999443 344333456788889999999988 77888999999999999999532 2344444443 3332
Q ss_pred CchhHH-hhcCCCCccCCCCCCC-CCCCCCCCceeeccCCCHHHHHHHHhc---CCCCeEEEEEcccCCC-CCcccCCHH
Q 011856 194 HADPFL-VKAGSGVATLGLPDSP-GVPKGATYETLTAPFNDVSALENLFEN---NKGEIAAIILEPVVGN-SGFIAPKPD 267 (476)
Q Consensus 194 ~~~~~~-~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~le~~l~~---~~~~~a~vi~ep~~~~-~G~i~~~~~ 267 (476)
+...+. ..+|..+.. ++... |.. |+++|++.++. |..++++|.+|...+. ||.+.+ .+
T Consensus 82 ~E~ga~~~~~G~~~~~--l~~~~~G~l-------------~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s-~~ 145 (290)
T PF01212_consen 82 DETGAIEELSGAKLIP--LPSDDDGKL-------------TPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYS-LE 145 (290)
T ss_dssp SSTTHHHHHTTCEEEE--EBECTGTBB--------------HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB----HH
T ss_pred eccchhhHhcCcEEEE--CCCcccCCC-------------CHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCC-HH
Confidence 222333 334443332 12222 211 79999999986 4457888888877665 565554 55
Q ss_pred HHHHHHHHHHHhCCEEEEeccccCc---cccccchhhccCCCCchh--hhhhhcCCCCcEEEE-EecHHHHHh
Q 011856 268 FLNAIRRITKENGALLIFDEVMTGF---RLAYGGAQEYFGVTPDLT--TLGKIIGGGLPVGAY-GGRRDIMEM 334 (476)
Q Consensus 268 ~l~~l~~l~~~~g~llI~DEv~~g~---r~g~~~~~~~~g~~pDi~--t~sK~lg~G~~iG~~-~~~~~i~~~ 334 (476)
.|++|.++|++||+.|++|-+...- ..+. ...+.. -..|++ +++|.++ .+.|++ ++++++++.
T Consensus 146 el~ai~~~a~~~gl~lhmDGARl~~a~~~~~~-~~~e~~-~~~D~v~~~~tK~~g--~~~Gavl~~~~~~i~~ 214 (290)
T PF01212_consen 146 ELRAISELAREHGLPLHMDGARLANAAAALGV-SLAEIA-AGADSVSFGGTKNGG--APGGAVLAGNKEFIAK 214 (290)
T ss_dssp HHHHHHHHHHHHT-EEEEEETTHHHHHCHHHH-HHHHHH-TTSSEEEEETTSTT---SSSEEEEEESHHHHHH
T ss_pred HHHHHHHHHHhCceEEEEehhhHHHhhhcccc-cHHHHh-hhCCEEEEEEEcccc--cccceEEEechHHHHH
Confidence 5999999999999999999665210 0010 111222 235766 4667654 467766 778886554
No 345
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.38 E-value=3.5e-11 Score=118.92 Aligned_cols=305 Identities=12% Similarity=-0.023 Sum_probs=169.7
Q ss_pred cHHHHHHHHHHHHhcC---CCC-CCCHHHHHHHHHHHhhCCC--CCeEEEe-CCHHHHHHHHHHHHHhccCCceEEEEeC
Q 011856 117 DDQVLAALGETMKKGT---SFG-APCLLENVLAEMVISAVPS--IEMVRFV-NSGTEACMGVLRLARAFTGRERIIKFEG 189 (476)
Q Consensus 117 ~p~v~~a~~~~l~~~~---~~~-~~~~~~~~la~~l~~~~~~--~e~v~~~-~sGseA~~~al~~ar~~~~~~~ii~~~~ 189 (476)
+|+|.+|+..+..... +.+ ...+...+..+.+++++.. ..+|+|+ +|||.+++.++.. +..+ +.+....
T Consensus 15 ~~~v~~a~~~~~~~~~~~~hr~~~f~~~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~~~---l~~~-~~l~i~~ 90 (361)
T TIGR01366 15 RLEQLQALTTTAASLFGTSHRQAPVKNLVGRVREGLAELFSLPDGYEVILGNGGATAFWDAATFG---LIEK-KSLHLSF 90 (361)
T ss_pred CHHHHHHHHhcCccccccCcCChHHHHHHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHHHh---cccc-cccEEec
Confidence 6888888764421111 111 1235556777778777752 3378885 7799999999983 3322 2333333
Q ss_pred CCCCCchhHHhhc---CCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCH
Q 011856 190 CYHGHADPFLVKA---GSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKP 266 (476)
Q Consensus 190 ~yhg~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~ 266 (476)
+.||....-.... ...+ ..+.++.+ +.++..+ .+++++|.+..+.+.+|.+.|
T Consensus 91 G~~~~~~~~~a~~~~~~~~~-----------------~~~~~~~~--~~~~~~~---~~~~~lV~~~h~et~tG~~~p-- 146 (361)
T TIGR01366 91 GEFSSKFAKAVKLAPWLGEP-----------------IIVTADPG--SAPEPQA---DPGVDVIAWAHNETSTGVAVP-- 146 (361)
T ss_pred CHHHHHHHHHHHhhhccCCc-----------------eEEecCCC--CCCCCcc---CCCCCEEEEcccCCccceecc--
Confidence 4444322222211 0111 11222211 1122112 236888999998888999999
Q ss_pred HHHHHHHHHHHHhCCEEEEeccccCccccccchhhccCC-CCchhhhh--hhcCCCCcEEEEEecHHHHHhhcCC---CC
Q 011856 267 DFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGV-TPDLTTLG--KIIGGGLPVGAYGGRRDIMEMVAPA---GP 340 (476)
Q Consensus 267 ~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~-~pDi~t~s--K~lg~G~~iG~~~~~~~i~~~l~~~---~~ 340 (476)
+++| ++++|+++|+|-+++ + |. ...++ ..|++++| |.+++---++.++.++++++.+.+. +.
T Consensus 147 --i~~I---~~~~g~~~iVDavqs-~--g~----~~idv~~~D~~~~s~~K~lg~~~Gl~~~~~s~~~~~~~~~~~~~~~ 214 (361)
T TIGR01366 147 --VRRP---EGSDDALVVIDATSG-A--GG----LPVDIAETDVYYFAPQKNFASDGGLWLAIMSPAALERIEAIAASGR 214 (361)
T ss_pred --cccc---cccCCCeEEEEcCcc-c--cC----CCCCHHHCCEEEEEchhhcCCCCceEEEEECHHHHhhhhcccCCCC
Confidence 5555 689999999999995 1 11 11111 14777655 9988310155557799888776521 00
Q ss_pred ---cc-----------ccCCCCCcHHH-HHHHHHHHHHhcCC----CHHHHHHHHHHHHHHHHHHHhhhcCCceEee-ee
Q 011856 341 ---MY-----------QAGTLSGNPLA-MTAGIHTLKRLKEP----GTYEYLNKITGELTQGIIDAGKKAGHAICGG-YI 400 (476)
Q Consensus 341 ---~~-----------~~~t~~~~~~~-~aaa~aal~~~~~~----~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~-~~ 400 (476)
.+ ..+|.+.+++. ..+..++++.+.+. ...++.+++.+++++.|.+...-......-. ..
T Consensus 215 ~~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s 294 (361)
T TIGR01366 215 WVPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKRS 294 (361)
T ss_pred CCchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcc
Confidence 01 02334443333 33566778877653 3345666677777777776642111110000 01
Q ss_pred ceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCC----CcceEEe--CCCcHHHHHHHHHHHHHHHHHh
Q 011856 401 SGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ----FEAGFTS--LAHSSDDIQHTITAAEKVKMRF 474 (476)
Q Consensus 401 g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~----~~~~~~~--~~~t~e~i~~~~~~l~~~~~~~ 474 (476)
.....+.|.+ .....++...|.++||.+.++. ...+|++ ..+|++|+++++++|+++++++
T Consensus 295 ~~v~~v~~~~-------------g~~~~~v~~~L~~~gI~i~~~~~~l~~~~vRis~~~~~t~~di~~l~~al~~~~~~~ 361 (361)
T TIGR01366 295 QVVGTIDFVD-------------DIDAATVAKILRANGIVDTEPYRKLGRNQLRVAMFPAIDPDDVEALTECVDWVVERL 361 (361)
T ss_pred cceEEEECCC-------------ccCHHHHHHHHHHCCCeeccCccccCCCcEEEEcCCCCCHHHHHHHHHHHHHHHhhC
Confidence 1112222321 1123567788888999987652 2346774 5679999999999999988763
No 346
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.38 E-value=8.2e-11 Score=116.24 Aligned_cols=309 Identities=14% Similarity=0.047 Sum_probs=168.1
Q ss_pred CcHHHHHHHHHHHHhcCCCC-----CC------CHHHHHHHHHHHhhCC--CCCeEEEeCC-HHHHHHHHHHHHHhccCC
Q 011856 116 ADDQVLAALGETMKKGTSFG-----AP------CLLENVLAEMVISAVP--SIEMVRFVNS-GTEACMGVLRLARAFTGR 181 (476)
Q Consensus 116 ~~p~v~~a~~~~l~~~~~~~-----~~------~~~~~~la~~l~~~~~--~~e~v~~~~s-GseA~~~al~~ar~~~~~ 181 (476)
-++.|++|+.+.+.+..+.+ .. .+...+..+.+++++. ..+.|+|++| ||++++.++.....-.++
T Consensus 10 ~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~~~~~~l~~~~~~ 89 (355)
T cd00611 10 LPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAVPLNLLGDKGT 89 (355)
T ss_pred CCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCCCCCe
Confidence 47899999999875421111 11 1556677888888886 3567888866 999999999842110113
Q ss_pred ceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCC-HHHHHHHHhcCCCCeEEEEEcccCCCCC
Q 011856 182 ERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFND-VSALENLFENNKGEIAAIILEPVVGNSG 260 (476)
Q Consensus 182 ~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-~~~le~~l~~~~~~~a~vi~ep~~~~~G 260 (476)
..+|+. +.|.-+........|..+.....+. .+ .+.+ .+..+..+. +++++|.+..+.+.+|
T Consensus 90 ~~~i~~-g~~~~~~~~~a~~~g~~~~~~~~~~-~g------------~~~~~~~~~~~~~~---~~~~lV~~~h~~t~tG 152 (355)
T cd00611 90 ADYVVT-GAWSAKAAKEAKRYGGVVVIVAAKE-EG------------KYTKIPDVETWDLA---PDAAYVHYCSNETIHG 152 (355)
T ss_pred EEEEEC-CHHHHHHHHHHHhcCCCcEEEeccc-cc------------CCCCCCCHhhcCCC---CCCCEEEEeCCccccc
Confidence 333332 2221111111122232222111110 00 0112 121222222 3677787777777778
Q ss_pred cccCCHHHHHHHHHHHHHhCCEEEEecccc-CccccccchhhccCCCCchhhhhhhcCCCCcEEEEEecHHHHHhhcCCC
Q 011856 261 FIAPKPDFLNAIRRITKENGALLIFDEVMT-GFRLAYGGAQEYFGVTPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAG 339 (476)
Q Consensus 261 ~i~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~r~g~~~~~~~~g~~pDi~t~sK~lg~G~~iG~~~~~~~i~~~l~~~~ 339 (476)
.+.+ ++++.||+++++|-+++ |- ...-.+.+++ ++.+--|.+|. ..+|.+++++++.+.+.+..
T Consensus 153 ~~~~---------~i~~~~g~~~~VDa~qs~g~---~~idv~~~~~--~~ss~~K~lGP-~G~g~l~~~~~~~~~~~~~~ 217 (355)
T cd00611 153 VEFD---------EVPDTGGVPLVADMSSNILS---RPIDVSKFGV--IYAGAQKNLGP-AGVTVVIVRKDLLGKARKIT 217 (355)
T ss_pred EEcc---------eecccCCCeEEEEccccccC---CCCCHHHhCE--EEeecccccCC-CceEEEEECHHHHhhcccCC
Confidence 7633 45566999999999995 11 1111122221 23234588862 23899999999987765321
Q ss_pred C-cc-------ccC-CCCCcHHHHHHHHHHHHHhcCC----CHHHHHHHHHHHHHHHHHHH-hhhcCCceEeeee-ceeE
Q 011856 340 P-MY-------QAG-TLSGNPLAMTAGIHTLKRLKEP----GTYEYLNKITGELTQGIIDA-GKKAGHAICGGYI-SGMF 404 (476)
Q Consensus 340 ~-~~-------~~~-t~~~~~~~~aaa~aal~~~~~~----~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~v~~~-g~~~ 404 (476)
+ .. ... .++.|.....+..++|+.+.+. ...++.+++.+++++.|+++ +. +....+.... +..+
T Consensus 218 ~~~~~~~~~~~~~~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl-~~~~~~~~~rs~~vv 296 (355)
T cd00611 218 PSMLNYKTHADNNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGF-YRGPVDKRARSRMNV 296 (355)
T ss_pred CCcccHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCccc-cccCCCHHHcCceEE
Confidence 1 11 011 1234555667777888887643 44566667777777777765 21 1011110111 2334
Q ss_pred EEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCC--CcceEEeCCC--cHHHHHHHHHHHHHH
Q 011856 405 GFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ--FEAGFTSLAH--SSDDIQHTITAAEKV 470 (476)
Q Consensus 405 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~--~~~~~~~~~~--t~e~i~~~~~~l~~~ 470 (476)
.+.+.+. ....++...+.++|+.+.++. .+.+|+++.+ |++|||+++++|+++
T Consensus 297 sf~~~~~-------------~l~~~~~~~~~r~G~~~~~~~~~~g~vR~S~~~~nt~edi~~l~~al~~~ 353 (355)
T cd00611 297 PFRLGKE-------------ELEKEFLKEAEAAGMIGLKGHRSVGGIRASIYNALSLEGVQALADFMKEF 353 (355)
T ss_pred EEEcCCh-------------hhhHHHHHHHHHCCCcccCCCcccCeEEEEccCCCCHHHHHHHHHHHHHH
Confidence 4443220 111455567888999854442 2457886544 999999999999874
No 347
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.36 E-value=7e-10 Score=102.00 Aligned_cols=330 Identities=17% Similarity=0.116 Sum_probs=196.4
Q ss_pred EcCCCEEEecccChhhccCCCCcHHHHHHHHHHH-Hh-c-----CCC-C--CCCHHHHHHHHHHHhhCC-CCCeEEEeCC
Q 011856 95 DIDGNEYIDYVGSWGPAIIGHADDQVLAALGETM-KK-G-----TSF-G--APCLLENVLAEMVISAVP-SIEMVRFVNS 163 (476)
Q Consensus 95 d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l-~~-~-----~~~-~--~~~~~~~~la~~l~~~~~-~~e~v~~~~s 163 (476)
+.+|-.||| + |.||..++.+.+...+.. +. + ..+ + ..-.+-+.|..+|+-+.+ ...+|.+++|
T Consensus 28 lp~~viyLd---g---nSLGa~p~~~~a~~~q~a~deW~~~lirsw~~a~~~W~~lp~~lgdklApLiGA~~~Evvv~dt 101 (407)
T COG3844 28 LPGGVIYLD---G---NSLGARPRAVTARLQQVATDEWGEGLIRSWNKAKADWFDLPERLGDKLAPLIGARAGEVVVTDT 101 (407)
T ss_pred CCCCeEEee---c---cccccCchHHHHHHHHHHHHHHHhhhhhhhcccCCchhhchhHHHHHhhhhhcCCCCceEEeCC
Confidence 455666766 4 678876655555444433 22 1 111 0 112334556666666665 4678888887
Q ss_pred HHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcC
Q 011856 164 GTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN 243 (476)
Q Consensus 164 GseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~ 243 (476)
-+--+.-.+..+...+.++.||++++..+..-... ...-..+. .... ++.. -..++++++.++
T Consensus 102 ts~nl~k~L~aalr~~~~r~vIv~E~~~fpTdly~-a~g~~~~~----~~~~--------~~~~--~~~P~~~~~~~~-- 164 (407)
T COG3844 102 TSINLFKVLAAALRPQEGRRVIVSEGDNFPTDLYI-AEGLADLL----GIGY--------DLEG--VIAPRALEEAIT-- 164 (407)
T ss_pred cchHHHHHHHHHhccCCCceEEeecCCCCCcchhh-hcchhhhh----cccc--------ccee--eeChHHHHHhhc--
Confidence 77766667766555666788888887654422111 10000000 0000 0000 014678888887
Q ss_pred CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc-Cccccccchhhc--cCCCCchhhhhhhcCCC-
Q 011856 244 KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT-GFRLAYGGAQEY--FGVTPDLTTLGKIIGGG- 319 (476)
Q Consensus 244 ~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~-g~r~g~~~~~~~--~g~~pDi~t~sK~lg~G- 319 (476)
++++.|++..++.-+|.... +.+|-+++++||++++.|=+|+ |- ...+. .|..--|-|-=|.+++|
T Consensus 165 -dd~AvV~L~~V~y~TGql~d----m~aiT~~AH~~galv~wDLAHsaGa-----vp~~Lh~~gaDfaigcsyKYLNgGP 234 (407)
T COG3844 165 -DDVAVVLLSHVNYKTGQLLD----MRAITALAHQHGALVGWDLAHSAGA-----VPVDLHAAGADFAIGCSYKYLNGGP 234 (407)
T ss_pred -cceEEEEeccccccccceee----HHHHHHHHHhcCceEEeehhcccCC-----cceeecccCCCeeeeeeceeccCCC
Confidence 48999999999999999998 9999999999999999999995 22 11121 23322244566988865
Q ss_pred -CcEEEEEecHHHHHhhcC--------CCCccc------------cCCCCCcHHHHHHHHHHHHHhcC---CCHHHHHHH
Q 011856 320 -LPVGAYGGRRDIMEMVAP--------AGPMYQ------------AGTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNK 375 (476)
Q Consensus 320 -~~iG~~~~~~~i~~~l~~--------~~~~~~------------~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~ 375 (476)
-|.|.++.+ +..+...+ ..++.. +-.-..+.+++++...+|++..+ .+++++.-.
T Consensus 235 Gapa~l~v~~-~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aLDifa~~~i~~lR~kSla 313 (407)
T COG3844 235 GAPAGLFVAP-RHRERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGALDIFADVDITELRKKSLA 313 (407)
T ss_pred CCceeEEecc-ccccccccccccccCCCCcchhhhccCcCccccceeeCCcchhhhHHHhhhhhhhhhcCHHHHHHhhhH
Confidence 444444443 33222211 011100 00112345677777788887665 556667777
Q ss_pred HHHHHHHHHHHHhhhcCCceEee----eeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCCcceEE
Q 011856 376 ITGELTQGIIDAGKKAGHAICGG----YISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT 451 (476)
Q Consensus 376 ~~~~l~~~L~~~~~~~~~~~~v~----~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~ 451 (476)
+.+++.+.++.....+++....+ ..|.-+.+... ...++.+.|.++||+..-.....+|+
T Consensus 314 LTd~fieLvEa~~~~~~l~l~tPr~~~~rGsqvS~~hp----------------~~~~V~qaLi~rGVigD~R~P~vlRf 377 (407)
T COG3844 314 LTDYFIELVEARCEYYGLTLVTPRAHEERGSQVSLYHP----------------HGYQVMQALIDRGVIGDFREPDVLRF 377 (407)
T ss_pred HHHHHHHHHHhccccCCcEEeccchhhhccceeeEecC----------------cHHHHHHHHHHcCccccccCCCeeee
Confidence 77888777776654444322111 12333333321 23678899999999865554556666
Q ss_pred ---eCCCcHHHHHHHHHHHHHHHHHh
Q 011856 452 ---SLAHSSDDIQHTITAAEKVKMRF 474 (476)
Q Consensus 452 ---~~~~t~e~i~~~~~~l~~~~~~~ 474 (476)
++..+.+|+=.+++.|+++++..
T Consensus 378 gftPlY~~~~DVw~AV~~L~evL~t~ 403 (407)
T COG3844 378 GFTPLYVSFVDVWDAVDALEEVLDTL 403 (407)
T ss_pred cCccceechhHHHHHHHHHHHHHHhh
Confidence 68889999999999999998764
No 348
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.36 E-value=1.6e-10 Score=108.26 Aligned_cols=166 Identities=19% Similarity=0.159 Sum_probs=121.6
Q ss_pred CCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCC
Q 011856 137 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPG 216 (476)
Q Consensus 137 ~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~ 216 (476)
.++....|.++++.+-++ --.+.+.||..|+..|+.. ....+++|+....-|-|.+..+....
T Consensus 60 ~NPT~~vlE~RiAaLEGG-~aa~a~aSG~AA~~~ai~~--la~aGD~iVss~~LYGGT~~lf~~tl-------------- 122 (426)
T COG2873 60 MNPTTDVLEERIAALEGG-VAALAVASGQAAITYAILN--LAGAGDNIVSSSKLYGGTYNLFSHTL-------------- 122 (426)
T ss_pred cCchHHHHHHHHHHhhcc-hhhhhhccchHHHHHHHHH--hccCCCeeEeeccccCchHHHHHHHH--------------
Confidence 355567888888877643 3456788899999999984 23457788887777877554332211
Q ss_pred CCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCccccc
Q 011856 217 VPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY 296 (476)
Q Consensus 217 ~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~ 296 (476)
+..+-++..+..+|++.+++.+++ ++++|++|.+-|+.+.+.. +++|.++|+++|++||+|...+.
T Consensus 123 --~~~Gi~v~fvd~~d~~~~~~aI~~---nTkavf~EtigNP~~~v~D----ie~ia~iAh~~gvpliVDNT~at----- 188 (426)
T COG2873 123 --KRLGIEVRFVDPDDPENFEAAIDE---NTKAVFAETIGNPGLDVLD----IEAIAEIAHRHGVPLIVDNTFAT----- 188 (426)
T ss_pred --HhcCcEEEEeCCCCHHHHHHHhCc---ccceEEEEeccCCCccccC----HHHHHHHHHHcCCcEEEecCCCc-----
Confidence 111224667777789999999985 7999999999999999998 99999999999999999998852
Q ss_pred cchhhccCCCCchh--hhhhhcCC-CCcEEEEEecHHHHH
Q 011856 297 GGAQEYFGVTPDLT--TLGKIIGG-GLPVGAYGGRRDIME 333 (476)
Q Consensus 297 ~~~~~~~g~~pDi~--t~sK~lg~-G~~iG~~~~~~~i~~ 333 (476)
.+.+..+....||+ +++|.+|| |--+|.++...--.+
T Consensus 189 pyl~rP~~hGADIVvHS~TK~igGhGt~iGG~iVD~G~FD 228 (426)
T COG2873 189 PYLCRPIEHGADIVVHSATKYIGGHGTAIGGVIVDGGKFD 228 (426)
T ss_pred ceecchhhcCCCEEEEeecccccCCccccceEEEeCCccc
Confidence 12233344456887 68999996 778888866544333
No 349
>PRK15029 arginine decarboxylase; Provisional
Probab=99.34 E-value=7.4e-11 Score=124.22 Aligned_cols=232 Identities=10% Similarity=0.036 Sum_probs=143.0
Q ss_pred HHHHHHHHHHHhhCCCCCe-EEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCC-CCCCCC
Q 011856 139 LLENVLAEMVISAVPSIEM-VRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLG-LPDSPG 216 (476)
Q Consensus 139 ~~~~~la~~l~~~~~~~e~-v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~-~~~~~~ 216 (476)
..-.+..+..++.+ +.++ .+.+||.|.+|.+++. +..++++.|+++...|-+...++.++|..+..+. .-...|
T Consensus 205 G~I~eAq~~aA~~f-gA~~t~FlvNGST~gn~a~i~---a~~~~gd~Vlv~RN~HKSv~~al~L~ga~Pvyl~P~~~~~G 280 (755)
T PRK15029 205 GAFGESEKYAARVF-GADRSWSVVVGTSGSNRTIMQ---ACMTDNDVVVVDRNCHKSIEQGLILTGAKPVYMVPSRNRYG 280 (755)
T ss_pred cHHHHHHHHHHHHh-CCCcEEEEeCChhHHHHHHHH---HhcCCCCEEEeecccHHHHHHHHHHcCCeEEEecccccccC
Confidence 33344444555556 5554 5557777778887777 4556666777888889999999999887554321 111122
Q ss_pred CCCCCCCceeeccCCCHHHHHHHHhcCCCCe--------EEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEecc
Q 011856 217 VPKGATYETLTAPFNDVSALENLFENNKGEI--------AAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEV 288 (476)
Q Consensus 217 ~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~--------a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv 288 (476)
++... ...+-+.+.+++.++++++.. ++|++.|.+ .|.+.. ++.|.++|+++|++|++||+
T Consensus 281 i~~~i-----~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY--~Gv~~d----i~~I~~~~h~~~~~llvDEA 349 (755)
T PRK15029 281 IIGPI-----YPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTY--DGVCYN----AKEAQDLLEKTSDRLHFDEA 349 (755)
T ss_pred CccCC-----CccccCHHHHHHHHHhCchhhhccccCceEEEEECCCC--cceeeC----HHHHHHHHHhcCCeEEEECc
Confidence 21100 000114899999998776544 677778876 577887 99999999999999999999
Q ss_pred ccCc-cccccchh-hcc-----C-CCCc-hhh--hhhhcCCCCc-EEEEEecHH--HH--HhhcCCCCccccCCCCCcHH
Q 011856 289 MTGF-RLAYGGAQ-EYF-----G-VTPD-LTT--LGKIIGGGLP-VGAYGGRRD--IM--EMVAPAGPMYQAGTLSGNPL 352 (476)
Q Consensus 289 ~~g~-r~g~~~~~-~~~-----g-~~pD-i~t--~sK~lg~G~~-iG~~~~~~~--i~--~~l~~~~~~~~~~t~~~~~~ 352 (476)
|.+. +....+.. ... . ..+| +++ .=|.+++ +. .+++..+.. .+ +.++. .+....|.|.+-+
T Consensus 350 hGah~~F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~a-lTQaS~LHv~~~~~~id~~r~~~--~l~~~qSTSPSY~ 426 (755)
T PRK15029 350 WYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNA-LSQASYIHVREGRGAINFSRFNQ--AYMMHATTSPLYA 426 (755)
T ss_pred cccccccCccccccccccccccccCCCceEEEEchhhcccc-hhhhhhheeCCCccccCHHHHHH--HHHHHcCCCcHHH
Confidence 9544 44433321 111 1 3467 554 4487763 43 333433222 11 22221 1223345577888
Q ss_pred HHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHHHHHHh
Q 011856 353 AMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAG 388 (476)
Q Consensus 353 ~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~ 388 (476)
.++..-.+...++. .++.++..+....+++.++++.
T Consensus 427 LmASLD~ar~~m~~~~G~~l~~~~i~~~~~~r~~l~~~~ 465 (755)
T PRK15029 427 ICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLY 465 (755)
T ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhcc
Confidence 88877777776653 4567778888888888887653
No 350
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.34 E-value=1.3e-10 Score=114.89 Aligned_cols=230 Identities=17% Similarity=0.166 Sum_probs=140.4
Q ss_pred CCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCC
Q 011856 137 PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPG 216 (476)
Q Consensus 137 ~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~ 216 (476)
.++...+|.+.++++. +.+.++.++||+.|+.+++... ...+++||+....|.+.......... ..|
T Consensus 62 ~~P~~~~lE~~la~le-g~~~av~~sSG~aAi~~al~al--l~~GD~Vl~~~~~yg~t~~~~~~~~~----------~~G 128 (384)
T PRK06434 62 GNPTVQAFEEKYAVLE-NAEHALSFSSGMGAITSAILSL--IKKGKRILSISDLYGQTFYFFNKVLK----------TLG 128 (384)
T ss_pred CChhHHHHHHHHHHHh-CCCcEEEeCCHHHHHHHHHHHH--hCCCCEEEEecCccchHHHHHHHHHH----------hcC
Confidence 3556677888888887 5678899999999999999842 44567788766666554332211100 011
Q ss_pred CCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCccccc
Q 011856 217 VPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY 296 (476)
Q Consensus 217 ~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~ 296 (476)
+ ++..++.++.+.++ +. ++++++|++|.+.++.+.+.+ +++|.++|++++ +++|.++..
T Consensus 129 i------~v~fvd~~~~~~~~--l~--~~~tklv~~e~~snpt~~v~D----i~~I~~la~~~~--lvVD~t~~s----- 187 (384)
T PRK06434 129 I------HVDYIDTDRLNSLD--FD--PSNYDLIYAESITNPTLKVPD----IKNVSSFCHEND--VIVDATFAS----- 187 (384)
T ss_pred c------EEEEECCCChhhee--ec--CCCeeEEEEEcCCCCCceeec----HHHHHHHHHHcC--eEEECCCCC-----
Confidence 1 23333333333333 22 236889999998888888877 999999999998 456999831
Q ss_pred cchhhccCCCCchhh--hhhhcCC-C-CcEEEEEe-cHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHHH
Q 011856 297 GGAQEYFGVTPDLTT--LGKIIGG-G-LPVGAYGG-RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTYE 371 (476)
Q Consensus 297 ~~~~~~~g~~pDi~t--~sK~lg~-G-~~iG~~~~-~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~ 371 (476)
.......+...|+++ ..|.++| | .-.|.++. ++++.+.++. .........+|+.++.++..|+.+ +..++
T Consensus 188 ~~~~~pl~~gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~~~~~~~---~~~~~G~~~~~~~A~l~~~gL~tL--~~R~~ 262 (384)
T PRK06434 188 PYNQNPLDLGADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVE---RRKTLGSNPDPIQAYLALRGLKTL--GLRME 262 (384)
T ss_pred cccCCchhcCCCEEEeecccccCCCCCceEEEEecCcHHHHHHHHH---HHHhcCCCCCHHHHHHHHhCCCcH--HHHHH
Confidence 111122344567775 5599985 3 43565656 4556565541 110112244676666555555433 45666
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCce------------EeeeeceeEEEEEe
Q 011856 372 YLNKITGELTQGIIDAGKKAGHAI------------CGGYISGMFGFFFT 409 (476)
Q Consensus 372 ~~~~~~~~l~~~L~~~~~~~~~~~------------~v~~~g~~~~i~~~ 409 (476)
+..++...+.+.|++. |.+. ...+.|.|+.|++.
T Consensus 263 r~~~~a~~~a~~L~~~----p~v~~V~yPgl~~~~~~~~g~g~~~sf~l~ 308 (384)
T PRK06434 263 KHNKNGMELARFLRDS----KKISNVYYPDTEIGKKVLRGFGGMLSFELR 308 (384)
T ss_pred HHHHHHHHHHHHHHcC----CCccEEECCChHHHHHhcCCCCceEEEEEC
Confidence 7777777777777653 3221 12367889999985
No 351
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.26 E-value=6.9e-10 Score=111.75 Aligned_cols=251 Identities=21% Similarity=0.177 Sum_probs=157.4
Q ss_pred CcHHHHHHHHHHHHhcC----CCCCCCHHHHHHHHHHHhhCCCCC--eEEEeCCHHHHHHHHHHHHHhccC----C----
Q 011856 116 ADDQVLAALGETMKKGT----SFGAPCLLENVLAEMVISAVPSIE--MVRFVNSGTEACMGVLRLARAFTG----R---- 181 (476)
Q Consensus 116 ~~p~v~~a~~~~l~~~~----~~~~~~~~~~~la~~l~~~~~~~e--~v~~~~sGseA~~~al~~ar~~~~----~---- 181 (476)
.++...+++...+.+.. .+....+.+.++..++.+.+...+ .-.||+||||||+.++.++|.... .
T Consensus 74 ~~~~a~~~~~~~~~~nl~d~~~~p~a~~~E~~~v~~l~~l~~~~~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~ 153 (460)
T COG0076 74 VPPVAAELLVSALNKNLGDPDESPAAAELEERVVNMLSDLLGAPEEASGTFTSGGTEANLLALLAARERWRKRALAESGK 153 (460)
T ss_pred CHHHHHHHHHHHHhhcCCCcccChhHHHHHHHHHHHHHHHhCCCCCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcccc
Confidence 46777777777777632 122345778888899998885323 468999999999999999875431 0
Q ss_pred ---ceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeE-EEEEcccCC
Q 011856 182 ---ERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIA-AIILEPVVG 257 (476)
Q Consensus 182 ---~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a-~vi~ep~~~ 257 (476)
...|++....|-+..-++...|.+....+..... +. -|+++|++++.+. .+. +|+..-...
T Consensus 154 ~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v~~~~~~----------~~---id~~~l~~~i~~~--t~~g~vV~~aGtT 218 (460)
T COG0076 154 PGGKPNIVCSETAHFSFEKAARYLGLGLRRVPTVPTD----------YR---IDVDALEEAIDEN--TIGGVVVGTAGTT 218 (460)
T ss_pred cCCCCeEEecCcchhHHHHHHHHhCCCceeEEeccCc----------cc---cCHHHHHHHHHhh--ccCceEEEEecCC
Confidence 1146666678888888877777654432211100 01 1899999999864 222 255555556
Q ss_pred CCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-c-c-cccchhhccCC-CCchhhh--hhhcCCCCcEEEEEecHH-
Q 011856 258 NSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-R-L-AYGGAQEYFGV-TPDLTTL--GKIIGGGLPVGAYGGRRD- 330 (476)
Q Consensus 258 ~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r-~-g~~~~~~~~g~-~pDi~t~--sK~lg~G~~iG~~~~~~~- 330 (476)
+.|.+.| +++|.++|++||+++++|-++.|| - . ...+.+ .+++ ..|-+++ =|....-++.|+++.+++
T Consensus 219 ~~G~iDd----i~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~~-~f~l~~vdSIt~d~HK~g~aP~~~G~il~rd~e 293 (460)
T COG0076 219 DTGSIDD----IEELADIAEEYGIWLHVDAAFGGFLLPFLEPDGRW-DFGLEGVDSITVDGHKYGLAPIGCGVVLFRDEE 293 (460)
T ss_pred CCCccCC----HHHHHHHHHHcCCcEEEEccccceeecccCccchh-hcCCCCceEEEECcccccCCCCCceEEEEECHH
Confidence 6888988 999999999999999999999988 3 2 111110 1344 2355554 476656677999987655
Q ss_pred -HHHhhcCCCCcccc------CCCCCc--HHHHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHHHHHH
Q 011856 331 -IMEMVAPAGPMYQA------GTLSGN--PLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDA 387 (476)
Q Consensus 331 -i~~~l~~~~~~~~~------~t~~~~--~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~ 387 (476)
+.+.+... ..+.. .|..++ .-..++..+.+..+.. .++.++..++.+++.+.|++.
T Consensus 294 ~l~~~~~~~-~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~ 361 (460)
T COG0076 294 ALRRILIFA-DYYLPGGGIPNFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEELEKL 361 (460)
T ss_pred Hhhhhhhcc-cccCCCCCcCceeEeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhC
Confidence 44443311 11111 011111 2234455566666644 445555557788888877765
No 352
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.24 E-value=8.3e-09 Score=101.07 Aligned_cols=344 Identities=15% Similarity=0.043 Sum_probs=179.4
Q ss_pred CEEEecccChhhccCCCCcHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhc
Q 011856 99 NEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAF 178 (476)
Q Consensus 99 ~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~~~~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~ 178 (476)
..|||+.+-.++ +...++..+||.. |.-.+.-++...+|.+.+++.+ +.+.++++.+|..+...++++ +
T Consensus 41 dV~IDLrSDTgT---~apS~~m~aAM~~----GDD~Y~gdpSv~~Lee~vael~-G~E~alpthqGRgaE~Il~~~---~ 109 (467)
T TIGR02617 41 DVFIDLLTDSGT---GAVTQSMQAAMMR----GDEAYSGSRSYYALAESVKNIF-GYQYTIPTHQGRGAEQIYIPV---L 109 (467)
T ss_pred CeEEECccCCCC---CCCCHHHHHHHHc----CCcccccCchHHHHHHHHHHHh-CCceEEECCCCchHHHHHHHh---h
Confidence 347899887432 3346777777764 4322233444567777777777 889999999999999999884 3
Q ss_pred cC--CceEE------EEeCCCCCCc-hhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccC---CCHHHHHHHHhcCC-C
Q 011856 179 TG--RERII------KFEGCYHGHA-DPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPF---NDVSALENLFENNK-G 245 (476)
Q Consensus 179 ~~--~~~ii------~~~~~yhg~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~d~~~le~~l~~~~-~ 245 (476)
.+ ++.++ ++...+|-.+ -+....+|..+.....+.... .....++ -|+++|++.|++++ +
T Consensus 110 ~~~~g~e~g~~~~~~~v~hn~~fett~g~a~l~G~~~~~l~~~ea~~-------~~~~~~fkG~~dl~~le~~I~~~g~~ 182 (467)
T TIGR02617 110 IKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTARNVYTKEAFD-------TGVRYDFKGNFDLEGLERGIEEVGPN 182 (467)
T ss_pred cccccccccccccccccceEEEEecchHHHHHcCceeecccchhhcc-------cccCCCCCCCcCHHHHHHHHhhcCCC
Confidence 33 12222 1122333332 233444554322211110000 0001111 18999999998643 4
Q ss_pred CeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc----Cc---cc-ccc-c-----hhhccCCCCchh-
Q 011856 246 EIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT----GF---RL-AYG-G-----AQEYFGVTPDLT- 310 (476)
Q Consensus 246 ~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~----g~---r~-g~~-~-----~~~~~g~~pDi~- 310 (476)
++..+.+.-.+|..|..+.+.+.+++++++|++||+.++.|-+-. -| |. +.. . +.+.+. ..|.+
T Consensus 183 ~i~~v~~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~-~aDsvt 261 (467)
T TIGR02617 183 NVPYIVATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYK-YADMLA 261 (467)
T ss_pred CceeeeeeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhc-cCCEEE
Confidence 566555555555434444456669999999999999999996551 11 00 100 0 001111 23544
Q ss_pred -hhhhhcCCCCcEEEE-EecHH----HHHhhcCCCC-ccccCCCCCcHHH-HHHHHHHHHHhcCCCHHHHHHHHHHHHHH
Q 011856 311 -TLGKIIGGGLPVGAY-GGRRD----IMEMVAPAGP-MYQAGTLSGNPLA-MTAGIHTLKRLKEPGTYEYLNKITGELTQ 382 (476)
Q Consensus 311 -t~sK~lg~G~~iG~~-~~~~~----i~~~l~~~~~-~~~~~t~~~~~~~-~aaa~aal~~~~~~~~~~~~~~~~~~l~~ 382 (476)
|+||.++. |+|.+ +++++ +.+..+.... ...+.||++=.-- +.|....|+..-+++++.+--+..+||.+
T Consensus 262 ~slsKglgA--pvGg~Lag~d~~~~~l~~~~~~~~i~~EGf~tYGGlagrd~ea~a~Gl~e~~~~~yl~~ri~qv~yl~~ 339 (467)
T TIGR02617 262 MSAKKDAMV--PMGGLLCFKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMNLDWLAYRINQVQYLVN 339 (467)
T ss_pred EEcCCCCCC--cccceEEecchhHHHHHHHHHhhcccccCCcCcCchhHHHHHHHHhhhhhcccHHHHHHHHHHHHHHHH
Confidence 68898865 77776 55544 3344332111 2234566642221 22222235444446677776777888888
Q ss_pred HHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHH-HHCCeEe---ccC---C----------
Q 011856 383 GIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGM-LEEGVYF---APS---Q---------- 445 (476)
Q Consensus 383 ~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~~---~~~---~---------- 445 (476)
+|.+. +++... ..|.-+.++-.. +.+...++.--+..++-.| ++-||-. ... .
T Consensus 340 ~L~~~----Gvpi~~-~Gghav~iDa~~-----~lphip~~~fpa~al~~~ly~~~GiR~~e~G~~~~~rd~~~~~~~~~ 409 (467)
T TIGR02617 340 GLEEI----GVVCQQ-AGGHAAFVDAGK-----LLPHIPADQFPAHALACELYKVAGIRAVEIGSLLLGRDPKTGKQLPC 409 (467)
T ss_pred HHHhC----CCcEEe-cCccEEEEehhh-----hCCCCChhhCcHHHHHHHHHHHcCcceEeecceecccCCCCCccCCC
Confidence 88774 444322 333333333211 1111111111123343333 3445431 111 0
Q ss_pred -CcceEEe---CCCcHHHHHHHHHHHHHHHHH
Q 011856 446 -FEAGFTS---LAHSSDDIQHTITAAEKVKMR 473 (476)
Q Consensus 446 -~~~~~~~---~~~t~e~i~~~~~~l~~~~~~ 473 (476)
...+|+. -.-|.+++|...+++..+.+.
T Consensus 410 ~~el~RlaipRrvyt~~h~d~v~~~~~~~~~~ 441 (467)
T TIGR02617 410 PAELLRLTIPRATYTQTHMDFIIEAFKHVKEN 441 (467)
T ss_pred ccceeeeccccccccHhHHHHHHHHHHHHHhh
Confidence 1123442 356899999999999987653
No 353
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.23 E-value=2.2e-10 Score=110.27 Aligned_cols=190 Identities=16% Similarity=0.167 Sum_probs=127.6
Q ss_pred HHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCC
Q 011856 139 LLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVP 218 (476)
Q Consensus 139 ~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~ 218 (476)
+....+.+.+++.. +...++.++||..|...+++. .....++|+.++..|.|.. ..+..... ..|
T Consensus 77 Pt~~~le~~iaal~-ga~~~l~fsSGmaA~~~al~~--L~~~g~~iV~~~~~Y~gT~-~~l~~~~~---------~~g-- 141 (409)
T KOG0053|consen 77 PTRDVLESGIAALE-GAAHALLFSSGMAAITVALLH--LLPAGDHIVATGDVYGGTL-RILRKFLP---------KFG-- 141 (409)
T ss_pred CchHHHHHHHHHHh-CCceEEEecccHHHHHHHHHH--hcCCCCcEEEeCCCcccHH-HHHHHHHH---------HhC--
Confidence 33455566666555 667799999999999999985 3356788999999998843 33221111 011
Q ss_pred CCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCccccccc
Q 011856 219 KGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGG 298 (476)
Q Consensus 219 ~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~ 298 (476)
.....+..+|++.+++.+++ ++.+|++|.+-|+...+.. +++|+++|+++|+++|+|++..+. .
T Consensus 142 ----ie~~~vd~~~~~~~~~~i~~---~t~~V~~ESPsNPll~v~D----I~~l~~la~~~g~~vvVDnTf~~p-----~ 205 (409)
T KOG0053|consen 142 ----GEGDFVDVDDLKKILKAIKE---NTKAVFLESPSNPLLKVPD----IEKLARLAHKYGFLVVVDNTFGSP-----Y 205 (409)
T ss_pred ----ceeeeechhhHHHHHHhhcc---CceEEEEECCCCCcccccc----HHHHHHHHhhCCCEEEEeCCcCcc-----c
Confidence 12333333456666666664 7999999999888888888 999999999999999999999643 1
Q ss_pred hhhccCCCCchh--hhhhhcCCC--CcEEEEEec-HHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHH
Q 011856 299 AQEYFGVTPDLT--TLGKIIGGG--LPVGAYGGR-RDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLK 362 (476)
Q Consensus 299 ~~~~~g~~pDi~--t~sK~lg~G--~~iG~~~~~-~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~ 362 (476)
.++.+.+-.||+ +.+|.|+|. +-.|.++.+ +++...+.. ....--++.+|..+.-....++
T Consensus 206 ~~~pL~lGADIV~hSaTKyi~Ghsdvi~G~iv~n~~~~~~~l~~---~~~~lg~~~~p~~~~ll~Rglk 271 (409)
T KOG0053|consen 206 NQDPLPLGADIVVHSATKYIGGHSDVIGGSVVLNSEELASRLKF---LQEDLGWCEDPFDLFLLSRGLK 271 (409)
T ss_pred ccChhhcCCCEEEEeeeeeecCCcceeeeEEecCcHHHHHHHHH---HHHHhcCCCCHHHHHHHhcCcc
Confidence 223333446888 578999974 556666775 777776652 1122234567776665544443
No 354
>PLN02271 serine hydroxymethyltransferase
Probab=99.23 E-value=5.7e-09 Score=105.16 Aligned_cols=269 Identities=17% Similarity=0.101 Sum_probs=147.2
Q ss_pred CCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhh-cCCCCccCCCCCCCCCCCCCCCceeeccCC------CHH
Q 011856 162 NSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVK-AGSGVATLGLPDSPGVPKGATYETLTAPFN------DVS 234 (476)
Q Consensus 162 ~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~------d~~ 234 (476)
-||+.||.+++.. ...++++|+..+..+-|+....... .+..+ ...++ .-+++.++.+ |.+
T Consensus 221 ~SGs~AN~aV~~A--Ll~PGD~IL~ldl~~GGHlshg~~~~~g~~v------s~sG~----~~~~vpY~~d~~~g~IDyd 288 (586)
T PLN02271 221 YSCTSANFAVYTG--LLLPGDRIMGLDSPSGGHMSHGYYTPGGKKV------SGASI----FFESLPYKVNPQTGYIDYD 288 (586)
T ss_pred ccHHHHHHHHHHH--hcCCCCEEEEecCCCCCchhccccccccccc------ccccc----eEEEEEcccccccCccCHH
Confidence 3899999999973 2445677777766544432211100 00000 00010 0112222222 789
Q ss_pred HHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccc-cCc-cccccchhhccCCCCchhh-
Q 011856 235 ALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM-TGF-RLAYGGAQEYFGVTPDLTT- 311 (476)
Q Consensus 235 ~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~-~g~-r~g~~~~~~~~g~~pDi~t- 311 (476)
++++..... ++++|++...... ...+ +++++++|+++|++|++|-+| .|+ -.+.. . ..+. ..|++|
T Consensus 289 ~lek~a~~~--rPKLII~g~Sayp--r~~D----~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~-~-sP~~-~aDvvt~ 357 (586)
T PLN02271 289 KLEEKALDF--RPKILICGGSSYP--REWD----YARFRQIADKCGAVLMCDMAHISGLVAAKEC-V-NPFD-YCDIVTS 357 (586)
T ss_pred HHHHHhhhc--CCeEEEECchhcc--CcCC----HHHHHHHHHHcCCEEEEECcccccccccCcC-C-CCCc-CCcEEEe
Confidence 999865543 6788888664332 3455 899999999999999999999 566 32211 0 1111 358775
Q ss_pred -hhhhcCCCCcEEEEEecHH--------------------HHHhhcCC-CCccccCCCCCcHHHHHHHHHHHHHhcC---
Q 011856 312 -LGKIIGGGLPVGAYGGRRD--------------------IMEMVAPA-GPMYQAGTLSGNPLAMTAGIHTLKRLKE--- 366 (476)
Q Consensus 312 -~sK~lg~G~~iG~~~~~~~--------------------i~~~l~~~-~~~~~~~t~~~~~~~~aaa~aal~~~~~--- 366 (476)
.-|+|.| -+.|.+..+++ +.+.+... -+.+++++... ..++-..+++....
T Consensus 358 TTHKtLrG-PrGG~I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~---~IAalAvalkea~~~ef 433 (586)
T PLN02271 358 TTHKSLRG-PRGGIIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNN---HIAALAIALKQVATPEY 433 (586)
T ss_pred CCcccCCC-CCceEEEecccccccccCCccccccccccHHHHHHhhcccCCccccChhHH---HHHHHHHHHHHHhChHH
Confidence 5699974 23466666653 33333321 12333333221 23333344555544
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCC-
Q 011856 367 PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ- 445 (476)
Q Consensus 367 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~- 445 (476)
.++.+++.++.+.|.+.|.+.+.+ +... .-...++.+++....+ ....+.+.|-+.||.+....
T Consensus 434 k~Ya~QVv~NAkaLA~~L~~~G~~--vv~g-gTdnHlvLvDl~~~g~------------~G~~ae~~Le~~~I~~Nkn~i 498 (586)
T PLN02271 434 KAYMQQVKKNAQALASALLRRKCR--LVTG-GTDNHLLLWDLTTLGL------------TGKNYEKVCEMCHITLNKTAI 498 (586)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCe--EeeC-CCCcceeeecCcccCC------------CHHHHHHHHHHcCeEeccccC
Confidence 457777888888888888775322 1110 0123355555532100 11344455556688875431
Q ss_pred --------CcceEE------eCCCcHHHHHHHHHHHHHHHH
Q 011856 446 --------FEAGFT------SLAHSSDDIQHTITAAEKVKM 472 (476)
Q Consensus 446 --------~~~~~~------~~~~t~e~i~~~~~~l~~~~~ 472 (476)
...+|+ .....++|++++.+.|.++++
T Consensus 499 P~d~~~~~psGiRiGT~alT~rG~~e~d~~~iA~~i~~~~~ 539 (586)
T PLN02271 499 FGDNGTISPGGVRIGTPAMTSRGCLESDFETIADFLLRAAQ 539 (586)
T ss_pred CCCCCCCCCCcccccCHHHHhcCCCcHHHHHHHHHHHHHHh
Confidence 123555 245678888888888887765
No 355
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.21 E-value=1.7e-11 Score=120.47 Aligned_cols=231 Identities=15% Similarity=0.111 Sum_probs=143.2
Q ss_pred CCHHHHHHHHHHHhhCCCCCeEEE-eCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCC-CCCC
Q 011856 137 PCLLENVLAEMVISAVPSIEMVRF-VNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLG-LPDS 214 (476)
Q Consensus 137 ~~~~~~~la~~l~~~~~~~e~v~~-~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~-~~~~ 214 (476)
|.....+..+..++.+ +.++.+| +||.|.+|.+++. +..++++.|.++...|-+...++.+.|..+..+. ....
T Consensus 64 p~G~I~eAe~~aA~~f-GAd~t~flvnGsT~g~~a~i~---a~~~~gd~VLv~RN~HkSv~~alil~ga~Pvyi~p~~~~ 139 (417)
T PF01276_consen 64 PEGIIKEAEELAARAF-GADKTFFLVNGSTSGNQAMIM---ALCRPGDKVLVDRNCHKSVYNALILSGAIPVYIPPEDNE 139 (417)
T ss_dssp TBTHHHHHHHHHHHHH-TESEEEEESSHHHHHHHHHHH---HHTTTTCEEEEETT--HHHHHHHHHHTEEEEEEEEEE-T
T ss_pred CccHHHHHHHHHHHhc-CCCeEEEEecCchHHHHHHHH---HhcCCCCEEEEcCCcHHHHHHHHHHcCCeEEEecCCccc
Confidence 4444455555566666 6666655 5666777877777 4556777788888899998889988887543211 1111
Q ss_pred CCCCCCCCCceeeccC--CCHHHHHHHHhcCCCCeE---EEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccc
Q 011856 215 PGVPKGATYETLTAPF--NDVSALENLFENNKGEIA---AIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM 289 (476)
Q Consensus 215 ~~~~~~~~~~~~~~~~--~d~~~le~~l~~~~~~~a---~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~ 289 (476)
.|+. ..++. -+.+.+++.++++++..+ +||+.|.+ .|.+.. +++|.++|++++++|++||+|
T Consensus 140 ~gi~-------~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY--~Gv~~d----i~~I~~~~h~~~~~llvDEAh 206 (417)
T PF01276_consen 140 YGII-------GGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTY--YGVCYD----IKEIAEICHKHGIPLLVDEAH 206 (417)
T ss_dssp TS-B-------EEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-T--TSEEE-----HHHHHHHHCCTECEEEEE-TT
T ss_pred cCCc-------cCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCC--CeEEEC----HHHHHHHhcccCCEEEEEccc
Confidence 1221 11111 135899999998876666 78888876 588888 999999999999999999999
Q ss_pred cCc-cccccchhhccCCCCc-------hhh--hhhhcCCCCcEEEEEecHHH---HHhhcCCCCccccCCCCCcHHHHHH
Q 011856 290 TGF-RLAYGGAQEYFGVTPD-------LTT--LGKIIGGGLPVGAYGGRRDI---MEMVAPAGPMYQAGTLSGNPLAMTA 356 (476)
Q Consensus 290 ~g~-r~g~~~~~~~~g~~pD-------i~t--~sK~lg~G~~iG~~~~~~~i---~~~l~~~~~~~~~~t~~~~~~~~aa 356 (476)
.+. +.. .+.........| +++ .=|.+++=-..+++..+.+. .+.++. .+....|.+.+-+.++.
T Consensus 207 Gah~~F~-~lp~~a~~~gad~~~~~~~~vvqS~HKtL~altQts~lh~~~~~~v~~~~~~~--~l~~~~TTSPSY~lmAS 283 (417)
T PF01276_consen 207 GAHFGFH-PLPRSALALGADRPNDPGIIVVQSTHKTLPALTQTSMLHVKGDRIVDHERVNE--ALSMHQTTSPSYPLMAS 283 (417)
T ss_dssp -TTGGCS-GGGTTCSSTTSS-CTSBEEEEEEEHHHHSSS-TT-EEEEEETCCCTTHHHHHH--HHHHHS-SS--HHHHHH
T ss_pred cccccCC-CCccchhhccCccccccceeeeechhhcccccccceEEEecCCCcccHHHHHH--HHHHHcCCChHHHHHHH
Confidence 544 433 222233445556 665 44888732245666554431 233331 12234455888888888
Q ss_pred HHHHHHHhc-C--CCHHHHHHHHHHHHHHHHHHH
Q 011856 357 GIHTLKRLK-E--PGTYEYLNKITGELTQGIIDA 387 (476)
Q Consensus 357 a~aal~~~~-~--~~~~~~~~~~~~~l~~~L~~~ 387 (476)
.-.+.+.++ . .++.++..++.+.+|+.|++.
T Consensus 284 lD~a~~~m~~~~G~~l~~~~i~~a~~~R~~i~~~ 317 (417)
T PF01276_consen 284 LDVARAQMEEEEGRELLEEAIELAEEFRKKINRL 317 (417)
T ss_dssp HHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhc
Confidence 888877772 2 678888899999999999663
No 356
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=99.17 E-value=5.6e-09 Score=98.22 Aligned_cols=301 Identities=15% Similarity=0.138 Sum_probs=167.5
Q ss_pred cHHHHHHHHHHHHh-cCCCC------CCCHHHHHHHHHHHhhCC---CCCeEEEeCCHHHHHHHHHHHHHhccCCceEEE
Q 011856 117 DDQVLAALGETMKK-GTSFG------APCLLENVLAEMVISAVP---SIEMVRFVNSGTEACMGVLRLARAFTGRERIIK 186 (476)
Q Consensus 117 ~p~v~~a~~~~l~~-~~~~~------~~~~~~~~la~~l~~~~~---~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~ 186 (476)
+..+++.....++. +.+.| +..-.+..+|+.+.++-+ ++++|++|.|.+.|+...+++..+ ..++.|++
T Consensus 88 p~Dai~RA~~~L~~~gGs~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~-~~~~Gvli 166 (475)
T KOG0258|consen 88 PTDAIKRAKRILNDCGGSLGAYSDSQGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIA-GKKTGVLI 166 (475)
T ss_pred CHHHHHHHHHHHHhcCCcccccccccCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhc-CCCCceEe
Confidence 44555555566655 21222 234567788888877643 578999999999999999997533 35677888
Q ss_pred EeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCC---CCeEEEEEcccCCCCCccc
Q 011856 187 FEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK---GEIAAIILEPVVGNSGFIA 263 (476)
Q Consensus 187 ~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~---~~~a~vi~ep~~~~~G~i~ 263 (476)
.-+-|.-++.. +.+.|.....+-+....++. -|.+.|++.+++.. +..++|+++|-|++ |.+.
T Consensus 167 PiPQYPLYsAt-i~l~~~~~v~YyLdEe~~W~------------ld~~el~~~~~eA~k~i~~r~lvvINPGNPT-Gqvl 232 (475)
T KOG0258|consen 167 PIPQYPLYSAT-ISLLGGTQVPYYLDEESNWS------------LDVAELERSVDEARKGINPRALVVINPGNPT-GQVL 232 (475)
T ss_pred ecCCCchhHHH-HHHhCCcccceeeccccCCC------------CCHHHHHHHHHHHhccCCceEEEEECCCCcc-chhh
Confidence 87777664433 33333322221111111110 17888888886532 24578888987664 5554
Q ss_pred CCHHHHHHHHHHHHHhCCEEEEeccccC-c-ccc-ccchhh----ccC-CCCch---h---hhhhhcC--CCCcEEEE-E
Q 011856 264 PKPDFLNAIRRITKENGALLIFDEVMTG-F-RLA-YGGAQE----YFG-VTPDL---T---TLGKIIG--GGLPVGAY-G 326 (476)
Q Consensus 264 ~~~~~l~~l~~l~~~~g~llI~DEv~~g-~-r~g-~~~~~~----~~g-~~pDi---~---t~sK~lg--~G~~iG~~-~ 326 (476)
+++-+++|..+|.+++++|+.||||-. + -.+ .+..+. +.| ..||- . +.||++. .|.|.|++ +
T Consensus 233 -s~e~ie~i~~fa~~~~l~llaDEVYQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv 311 (475)
T KOG0258|consen 233 -SEENIEGIICFAAEEGLVLLADEVYQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMES 311 (475)
T ss_pred -cHHHHHHHHHHHHHcCeEEechHHHHhhccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeec
Confidence 445599999999999999999999943 3 333 222221 122 23432 2 5789887 48999998 4
Q ss_pred e--cHHHHHhhcCCCCccccCCCCCcHHHHHHH----------HHHHH--HhcCCCHHHHHHHHHHHHHHHHHHHhhhcC
Q 011856 327 G--RRDIMEMVAPAGPMYQAGTLSGNPLAMTAG----------IHTLK--RLKEPGTYEYLNKITGELTQGIIDAGKKAG 392 (476)
Q Consensus 327 ~--~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa----------~aal~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 392 (476)
. .+++.+.+.+....... .+..+++.. ....+ .-+.+...+.++++.+.+.+.++.+ .
T Consensus 312 ~n~~prv~~qi~Kl~si~lc----~~V~GQ~~vdl~VnPP~Pgd~Sy~~~~~Ekd~il~~l~~ra~l~~~~~ns~----~ 383 (475)
T KOG0258|consen 312 LNRDPRVKQQIKKLASIKLC----PQVSGQKLVDLVVNPPKPGDPSYDLFSSEKDGILSSLRSRAKLTEDAFNSL----E 383 (475)
T ss_pred ccCChhHHHHHHHHHhhhhc----CCccchhhhceecCCCCCCCcchhhhhhhhHhHHHHHHHHhHHHHHHHhhc----C
Confidence 3 34454444321110011 111111110 00111 1122566677777777777766654 3
Q ss_pred CceEeeeeceeEEEEEecCCCcCchhhc----ccchHHHHHHHHHHH-HCCeEeccCC
Q 011856 393 HAICGGYISGMFGFFFTEGPVYNFEDAK----KSETTKFARFYRGML-EEGVYFAPSQ 445 (476)
Q Consensus 393 ~~~~v~~~g~~~~i~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~-~~Gv~~~~~~ 445 (476)
.+.+-+..|.|+.+--..-+......+. .||. -.+..|+ .-||.+.|+.
T Consensus 384 gi~cn~~qGAMY~fP~i~lP~kaie~A~~~~~~PD~----FYc~~LLe~tGIcvVPGS 437 (475)
T KOG0258|consen 384 GISCNPVQGAMYLFPQISLPPKAIEAAKALGIAPDE----FYCLKLLEATGICVVPGS 437 (475)
T ss_pred ceeeccCccceeecccccCCHHHHHHHHHhCCCCcH----HHHHHHHHhcCeEEecCC
Confidence 4555566788876643221111111111 1221 1234555 4599999874
No 357
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.17 E-value=1.9e-09 Score=112.62 Aligned_cols=311 Identities=12% Similarity=0.040 Sum_probs=171.8
Q ss_pred CHHHHHHHHHHHhhCCCCCeE-EEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhH-HhhcCCCCccCC-CCCC
Q 011856 138 CLLENVLAEMVISAVPSIEMV-RFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPF-LVKAGSGVATLG-LPDS 214 (476)
Q Consensus 138 ~~~~~~la~~l~~~~~~~e~v-~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~-~~~~g~~~~~~~-~~~~ 214 (476)
.....+-.+..++.+ +.++. +++||.|.+|.+++. +..++++.|+++...|-+.... +.++|..+..+. .-..
T Consensus 173 eG~i~eAq~~AA~~f-gAd~tyFlvNGTS~gn~a~i~---a~~~~Gd~VLvdRN~HKSv~hgaLiLsGa~PVYl~P~~n~ 248 (720)
T PRK13578 173 EGAAKDAQKHAAKVF-NADKTYFVLNGTSASNKVVTN---ALLTPGDLVLFDRNNHKSNHHGALIQAGATPVYLETARNP 248 (720)
T ss_pred ChHHHHHHHHHHHHh-CCCceEEEeCChhHHHHHHHH---HhcCCCCEEEeecccHHHHHHHHHHHcCCeEEEeeccccc
Confidence 333344444555556 55554 557777788888887 5567777888888999887764 788777543221 1111
Q ss_pred CCCCCCCCCceeeccCC--CHHHHHHHHhcCC-C-------CeEEEEEcccCCCCCcccCCHHHHHHHHHH-HHHhCCEE
Q 011856 215 PGVPKGATYETLTAPFN--DVSALENLFENNK-G-------EIAAIILEPVVGNSGFIAPKPDFLNAIRRI-TKENGALL 283 (476)
Q Consensus 215 ~~~~~~~~~~~~~~~~~--d~~~le~~l~~~~-~-------~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l-~~~~g~ll 283 (476)
.|+.. .++.. +.+.+++.|++++ + -.++||+.|.+ .|.+.. ++.|.++ |++++ .|
T Consensus 249 ~Gi~g-------~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTY--dG~~yd----i~~I~~~~~h~~~-~l 314 (720)
T PRK13578 249 FGFIG-------GIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTY--DGTIYN----ARQVVDKIGHLCD-YI 314 (720)
T ss_pred cCCcC-------CCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCC--cceeec----HHHHHHHhhccCC-cE
Confidence 22211 11111 3577999998762 2 24567777766 588888 8999998 78888 99
Q ss_pred EEeccccCc-ccccc---chhhccCCCCc----hhh--hhhhcCCCCc-EEEEEecHHHH---------HhhcCCCCccc
Q 011856 284 IFDEVMTGF-RLAYG---GAQEYFGVTPD----LTT--LGKIIGGGLP-VGAYGGRRDIM---------EMVAPAGPMYQ 343 (476)
Q Consensus 284 I~DEv~~g~-r~g~~---~~~~~~g~~pD----i~t--~sK~lg~G~~-iG~~~~~~~i~---------~~l~~~~~~~~ 343 (476)
++||+|.+. +.... +........+| ++| .=|.+++ +- .+++..+...+ +.++. .+..
T Consensus 315 lvDEAhgah~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~a-lTQaS~LHvk~~~i~g~~~~v~~~r~~~--al~m 391 (720)
T PRK13578 315 LFDSAWVGYEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQAG-FSQTSQIHKKDNHIKGQARYCPHKRLNN--AFML 391 (720)
T ss_pred EEeCcchhhhccCcccccCChhhhhcCCCCCCeEEEEChhhcchh-hhhHhhhhcCCcccccccccCCHHHHHH--HHHH
Confidence 999999655 44332 11111234456 554 4487763 32 34443333211 12221 1112
Q ss_pred cCCCCCcHHHHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHHHHHHhhhcCCc--eEeee-------------------
Q 011856 344 AGTLSGNPLAMTAGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAGHA--ICGGY------------------- 399 (476)
Q Consensus 344 ~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~--~~v~~------------------- 399 (476)
..|.|.+-+.++..-.+-..++. .++.++..+....+|+.|.+....+... ..+.+
T Consensus 392 ~qSTSPsY~LmASLDva~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~w~ 471 (720)
T PRK13578 392 HASTSPFYPLFAALDVNAKMHEGESGRRLWMECVKLGIEARKLILARCKLIRPFIPPVVDGKPWQDYPTEQIASDLRFFS 471 (720)
T ss_pred HcCCChHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHhCCCeeecccccccccccccCchhhhcccccccc
Confidence 33446666666665554444442 5677788888888888883332211111 00100
Q ss_pred ---eceeEEEE-E-----ecCCCcCchhhcccchH-----------HHHHHHHHHHHCCeEeccCCCcceE--EeCCCcH
Q 011856 400 ---ISGMFGFF-F-----TEGPVYNFEDAKKSETT-----------KFARFYRGMLEEGVYFAPSQFEAGF--TSLAHSS 457 (476)
Q Consensus 400 ---~g~~~~i~-~-----~~~~~~~~~~~~~~~~~-----------~~~~~~~~l~~~Gv~~~~~~~~~~~--~~~~~t~ 457 (476)
.-.+.++. + .-++..-.. ..+.-. -...+.+.|.++||.+.-.+...+. ++...|+
T Consensus 472 ~~p~~~whgf~~~~~~~~~lDP~KltI--~t~G~~~~~G~~~~~Gipg~~l~~~L~e~gI~~E~~d~~~vL~l~s~g~t~ 549 (720)
T PRK13578 472 FEPGEKWHGFEGYAEDQYFVDPCKLLL--TTPGIDAETGEYEDFGIPATILANYLRENGIVPEKCDLNSILFLLTPAEDM 549 (720)
T ss_pred cccCccccccccccccccccCCceEEE--EcCCcCcccccccccCccHHHHHHHHHHcCCEEEecCCCeEEEEeCCCCCH
Confidence 00000000 0 000000000 001000 0356778888899998877655543 3788899
Q ss_pred HHHHHHHHHHHHHH
Q 011856 458 DDIQHTITAAEKVK 471 (476)
Q Consensus 458 e~i~~~~~~l~~~~ 471 (476)
++++.++++|.++-
T Consensus 550 ~~~~~Lv~aL~~f~ 563 (720)
T PRK13578 550 AKLQQLVAMLARFE 563 (720)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998763
No 358
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.16 E-value=1.1e-08 Score=106.91 Aligned_cols=310 Identities=10% Similarity=-0.017 Sum_probs=177.6
Q ss_pred CHHHHHHHHHHHhhCCCCCeEE-EeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCC-CCCCC
Q 011856 138 CLLENVLAEMVISAVPSIEMVR-FVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLG-LPDSP 215 (476)
Q Consensus 138 ~~~~~~la~~l~~~~~~~e~v~-~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~-~~~~~ 215 (476)
.....+..+..++.+ +.++.+ ++||.|.+|.+++. +..++++.|+++...|-+...++.++|..+..+. .-...
T Consensus 194 ~G~i~eAe~~aA~~f-gAd~tyfvvNGTS~~n~av~~---a~~~~Gd~VLvdRN~HKSv~~aLilsga~PVYl~P~~n~~ 269 (713)
T PRK15399 194 TGPHLEAEEYIARTF-GAEQSYIVTNGTSTSNKIVGM---YAAPAGSTLLIDRNCHKSLAHLLMMSDVVPIWLKPTRNAL 269 (713)
T ss_pred ChHHHHHHHHHHHHh-CCCcEEEEeCChHHHHHHHHH---HhcCCCCEEEeecccHHHHHHHHHHcCCeeEEeccccccc
Confidence 333444445555556 666555 46666788888887 4567777888899999988888888887544321 11112
Q ss_pred CCCCCCCCceeeccCCCHHHHHHHHhcCCCC---eEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEE-EEeccccC
Q 011856 216 GVPKGATYETLTAPFNDVSALENLFENNKGE---IAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALL-IFDEVMTG 291 (476)
Q Consensus 216 ~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~---~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~ll-I~DEv~~g 291 (476)
|++..... ..-+.+.+++.++++++. .++||+.|.+ .|.+.. ++.|.++| |+.+ ++||+|.+
T Consensus 270 Gi~g~I~~-----~~~~~e~I~~~i~~~p~~~~p~~vvit~pTY--dGi~yd----~~~I~~~~---g~~~ilvDEAhga 335 (713)
T PRK15399 270 GILGGIPR-----REFTRDSIEEKVAATTQAQWPVHAVITNSTY--DGLLYN----TDWIKQTL---DVPSIHFDSAWVP 335 (713)
T ss_pred CCcCCCCh-----hhccHHHHHHHHHhCCCcCCceEEEEECCCC--CceeeC----HHHHHHHh---CCCEEEEeccchh
Confidence 22110000 001458999999887643 4778888865 688887 88888888 6766 59999965
Q ss_pred c-cccccc----hhhccCCCCchh---h--hhhhcCCCC-cEEEEEecHHHH-HhhcCCCCccccCCCCCcHHHHHHHHH
Q 011856 292 F-RLAYGG----AQEYFGVTPDLT---T--LGKIIGGGL-PVGAYGGRRDIM-EMVAPAGPMYQAGTLSGNPLAMTAGIH 359 (476)
Q Consensus 292 ~-r~g~~~----~~~~~g~~pDi~---t--~sK~lg~G~-~iG~~~~~~~i~-~~l~~~~~~~~~~t~~~~~~~~aaa~a 359 (476)
. +....+ +.. .+-.+|.+ | .=|.+++ + ..+++..+..+- +.++. .+....|.|.+-+.++..-.
T Consensus 336 h~~F~p~~~~~sam~-~~~~aD~~i~~tQStHKtL~a-lTQaS~iHvk~~vd~~~~n~--a~~m~~STSPsY~LmASLD~ 411 (713)
T PRK15399 336 YTHFHPIYQGKSGMS-GERVPGKVIFETQSTHKMLAA-FSQASLIHIKGEYDEETFNE--AFMMHTSTSPSYPIVASVET 411 (713)
T ss_pred hhhcCcccCCcChhh-CCCCCCeeeeeeeehhccccc-cchheeeeecCCCCHHHHHH--HHHHHcCCCcHHHHHHHHHH
Confidence 5 433221 111 11145765 3 4487763 3 344554433221 12221 11233444777777777777
Q ss_pred HHHHhcC---CCHHHHHHHHHHHHHHHHHHHhhhcC-CceEeee------ecee------EEEEEec--------CCCcC
Q 011856 360 TLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAG-HAICGGY------ISGM------FGFFFTE--------GPVYN 415 (476)
Q Consensus 360 al~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~v~~------~g~~------~~i~~~~--------~~~~~ 415 (476)
+...++. .++.++..+....+|+.|.++..... +...+.+ ...+ -|.-|.. ++..-
T Consensus 412 a~~~m~~~~G~~l~~~~i~~a~~fR~~l~~~~~~~~~w~f~~~~~~~~~~~~~w~l~p~~~whgf~~~~~~~~~lDP~Kl 491 (713)
T PRK15399 412 AAAMLRGNPGKRLINRSVERALHFRKEVQRLREESDGWFFDIWQPENVDEAECWPVAPGEQWHGFKDADADHMFLDPVKV 491 (713)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHHhccccccCceeeecCccccCCccceecCCCcccccccccccccccCCCceE
Confidence 7666652 56778888888889988887632110 0011110 0000 0000000 00000
Q ss_pred chhhccc----------chHHHHHHHHHHHHCCeEeccCCCcceE--EeCCCcHHHHHHHHHHHHHHH
Q 011856 416 FEDAKKS----------ETTKFARFYRGMLEEGVYFAPSQFEAGF--TSLAHSSDDIQHTITAAEKVK 471 (476)
Q Consensus 416 ~~~~~~~----------~~~~~~~~~~~l~~~Gv~~~~~~~~~~~--~~~~~t~e~i~~~~~~l~~~~ 471 (476)
. ...| ...-...+.+.|.++||.+.-.+...+. ++...|+++++.++++|.++-
T Consensus 492 t--I~t~g~~~~g~~~~~Gi~g~~l~~~L~e~gI~~E~~d~~~vL~l~s~g~t~~~~~~L~~aL~~f~ 557 (713)
T PRK15399 492 T--ILTPGMDEQGNMSEEGIPAALVAKFLDERGIVVEKTGPYNLLFLFSIGIDKTKAMGLLRGLTEFK 557 (713)
T ss_pred E--EEecCcccccccccCCCCHHHHHHHHHHcCCEEEecCCCeEEEEeCCCCCHHHHHHHHHHHHHHH
Confidence 0 0001 0112356778888999998877655543 378889999999999998763
No 359
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.13 E-value=8.3e-08 Score=91.22 Aligned_cols=309 Identities=16% Similarity=0.144 Sum_probs=171.3
Q ss_pred CcHHHHHHHHHHHHh----c---CCCCC----CCHHHHHHHHHHHhhCCCCCeEEE-eCCHHHHHHHHHHHHHhccCCce
Q 011856 116 ADDQVLAALGETMKK----G---TSFGA----PCLLENVLAEMVISAVPSIEMVRF-VNSGTEACMGVLRLARAFTGRER 183 (476)
Q Consensus 116 ~~p~v~~a~~~~l~~----~---~~~~~----~~~~~~~la~~l~~~~~~~e~v~~-~~sGseA~~~al~~ar~~~~~~~ 183 (476)
..+.|.+|.-..+.+ | -.|+. .++.+.-..++..++| +.+.+-+ -.||+.||.+++.. ...+++.
T Consensus 38 ~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LF-ga~~anVQPhSGs~AN~av~~A--ll~pGDt 114 (413)
T COG0112 38 TSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLF-GAEYANVQPHSGSQANQAVYLA--LLQPGDT 114 (413)
T ss_pred CCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHHh-CCCccccCCCCchHHHHHHHHH--HcCCCCe
Confidence 579999999888876 1 11221 2334444445555566 5554433 35899999999983 2345566
Q ss_pred EEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCC------CHHHHHHHHhcCCCCeEEEEEcccCC
Q 011856 184 IIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFN------DVSALENLFENNKGEIAAIILEPVVG 257 (476)
Q Consensus 184 ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~------d~~~le~~l~~~~~~~a~vi~ep~~~ 257 (476)
|+..+-+.-|+.... .++ ...|. .-+++.++.+ |.|+++++.+++ +.++||+--.
T Consensus 115 imgm~l~~GGHltHg-----~~v------~~sG~----~~~~v~Y~vd~et~~IDyD~~~k~a~e~--kPK~ii~G~S-- 175 (413)
T COG0112 115 IMGLDLSHGGHLTHG-----SPV------NFSGK----LFNVVSYGVDPETGLIDYDEVEKLAKEV--KPKLIIAGGS-- 175 (413)
T ss_pred EecccCCCCCcccCC-----CCC------Cccce----eEEeEecccccccCccCHHHHHHHHHHh--CCCEEEECcc--
Confidence 666543332321110 000 00010 0122333322 789999999876 4555665321
Q ss_pred CCCcccCCHHHHHHHHHHHHHhCCEEEEeccc-cCc-cccccchhhccCCCCchhh--hhhhcCCCCcEEEEEecH-HHH
Q 011856 258 NSGFIAPKPDFLNAIRRITKENGALLIFDEVM-TGF-RLAYGGAQEYFGVTPDLTT--LGKIIGGGLPVGAYGGRR-DIM 332 (476)
Q Consensus 258 ~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~-~g~-r~g~~~~~~~~g~~pDi~t--~sK~lg~G~~iG~~~~~~-~i~ 332 (476)
.--...+ +++++++|++.|++|++|=+| .|+ -.|.+ . ..+.. .|++| .-|+|-| -|.|.+++++ ++.
T Consensus 176 aY~r~id----~~~~reIad~VGA~L~~DmAHiaGLVA~G~~-p-~P~~~-AdvVTtTTHKTlrG-PrGG~Il~~~eel~ 247 (413)
T COG0112 176 AYSRPID----FKRFREIADEVGAYLMVDMAHVAGLIAGGVH-P-NPLPH-ADVVTTTTHKTLRG-PRGGIILTNDEELA 247 (413)
T ss_pred ccccccC----HHHHHHHHHHhCceEEehHHHHHHHHhcccC-C-CCCCc-cceEeCCcccCCCC-CCceEEEeccHHHH
Confidence 1112344 999999999999999999999 777 33322 1 11221 57774 5599874 4677778874 888
Q ss_pred HhhcCCCCccccCCCCCcHHHHHHHH-HHHHHhcC---CCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEE
Q 011856 333 EMVAPAGPMYQAGTLSGNPLAMTAGI-HTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFF 408 (476)
Q Consensus 333 ~~l~~~~~~~~~~t~~~~~~~~aaa~-aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~ 408 (476)
+.+.. ...-+..+++-+-..||. -++....+ .++.+++.++.+.|.+.|.+.+.+. .. -.-...++.+++
T Consensus 248 kkin~---aVFPg~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~G~~v--vs-GgTdnHl~lVDl 321 (413)
T COG0112 248 KKINS---AVFPGLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKERGFKV--VS-GGTDNHLVLVDL 321 (413)
T ss_pred HHhhh---hcCCccCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHcCCeE--ec-CCccceEEEEEc
Confidence 88873 112223233222222222 22333333 4567778888888888888754321 11 011233555665
Q ss_pred ecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCC----------cceEE------eCCCcHHHHHHHHHHHHHHHH
Q 011856 409 TEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQF----------EAGFT------SLAHSSDDIQHTITAAEKVKM 472 (476)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~----------~~~~~------~~~~t~e~i~~~~~~l~~~~~ 472 (476)
..... ........|-+.||.+....- ..+|+ .....++|.+++.+.+.+++.
T Consensus 322 ~~~~~------------~Gk~ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl~ 389 (413)
T COG0112 322 RSKGL------------TGKKAEAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIADLIADVLD 389 (413)
T ss_pred ccCCC------------CHHHHHHHHHHcCEeeccCCCCCCCCCCCCCccceeccHHHhhcCCCHHHHHHHHHHHHHHHh
Confidence 42110 113334455566888764421 12465 245678888888888887765
No 360
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.10 E-value=3.8e-09 Score=110.31 Aligned_cols=307 Identities=9% Similarity=0.004 Sum_probs=175.3
Q ss_pred CCHHHHHHHHHHHhhCCCCCeEEE-eCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCC-CCCC
Q 011856 137 PCLLENVLAEMVISAVPSIEMVRF-VNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLG-LPDS 214 (476)
Q Consensus 137 ~~~~~~~la~~l~~~~~~~e~v~~-~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~-~~~~ 214 (476)
+.....+..+..++.+ +.++.+| +||.|.+|.+++. +..++++.|+++...|-+...++.++|..+..+. .-..
T Consensus 193 ~~G~i~eAe~~AA~~f-gAd~tyfvvNGTS~~n~av~~---a~~~~Gd~VLvdRN~HKSv~haLilsga~PVYl~P~rn~ 268 (714)
T PRK15400 193 HSGPHKEAEEYIARVF-NADRSYMVTNGTSTANKIVGM---YSAPAGSTVLIDRNCHKSLTHLMMMSDVTPIYFRPTRNA 268 (714)
T ss_pred CChHHHHHHHHHHHHh-CCCcEEEEeCchHHHHHHHHH---HhcCCCCEEEeecccHHHHHHHHHHcCCeEEEecccccc
Confidence 3334445555555556 6666555 6666778887777 4557777888899999998888888887544321 1111
Q ss_pred CCCCCCCCCceeeccCCCHHHHHHHHhcCCCCe---EEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccC
Q 011856 215 PGVPKGATYETLTAPFNDVSALENLFENNKGEI---AAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTG 291 (476)
Q Consensus 215 ~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~---a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g 291 (476)
.|+..... .. .-+.+.+++.++++++.. .+||+.|.+ .|.+.. ++.|.++|+.++ |++||+|.+
T Consensus 269 ~Gi~g~I~--~~---~~~~e~i~~~i~~~p~ak~p~~~vit~pTY--dG~~yd----~~~I~~~~~~~~--ilvDEAwga 335 (714)
T PRK15400 269 YGILGGIP--QS---EFQHATIAKRVKETPNATWPVHAVITNSTY--DGLLYN----TDFIKKTLDVKS--IHFDSAWVP 335 (714)
T ss_pred cCCccCCC--cc---ccCHHHHHHHHHhCccccCccEEEEECCCC--ccEecC----HHHHHHHhCCCC--EEEEccchh
Confidence 22211000 00 014799999998876433 578888866 688888 899999999887 689999965
Q ss_pred c-cccccc----hhhccCCCC-c--hhh--hhhhcCCCCc-EEEEEe----c-HHHHHhhcCCCCccccCCCCCcHHHHH
Q 011856 292 F-RLAYGG----AQEYFGVTP-D--LTT--LGKIIGGGLP-VGAYGG----R-RDIMEMVAPAGPMYQAGTLSGNPLAMT 355 (476)
Q Consensus 292 ~-r~g~~~----~~~~~g~~p-D--i~t--~sK~lg~G~~-iG~~~~----~-~~i~~~l~~~~~~~~~~t~~~~~~~~a 355 (476)
. +....+ +.. .|-.+ | ++| .=|.+++ +. .+++.. . +.+-+.+. ...|.|.+-+.++
T Consensus 336 h~~F~p~~~~~sam~-~ga~~~~~i~vtQStHKtL~a-lTQaS~LHvkg~vd~~~~n~a~~------m~~STSPsY~l~A 407 (714)
T PRK15400 336 YTNFSPIYEGKCGMS-GGRVEGKVIYETQSTHKLLAA-FSQASMIHVKGDVNEETFNEAYM------MHTTTSPHYGIVA 407 (714)
T ss_pred hhccCcccCCcChhh-cCCCCCCceEEEEchhhcccc-hhHHhHHHHcCCCCHHHHHHHHH------HHcCCCcHHHHHH
Confidence 5 433222 111 22221 3 444 4477763 22 222211 1 22222222 3334477777777
Q ss_pred HHHHHHHHhcC---CCHHHHHHHHHHHHHHHHHHHhhhc-CCceEeeeece--------------eEEEE-E-----ecC
Q 011856 356 AGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKA-GHAICGGYISG--------------MFGFF-F-----TEG 411 (476)
Q Consensus 356 aa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~v~~~g~--------------~~~i~-~-----~~~ 411 (476)
..-.+...++. .++.++..+....+|+.|.++.... ++...+.+.-. +.++. + .-+
T Consensus 408 SLD~a~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~~~~~~~~~~~w~~~p~~~whgf~~~~~~~~~lD 487 (714)
T PRK15400 408 STETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLD 487 (714)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhCCCcccCceEEecChhhcccchhcccCccccccCcccccccccccC
Confidence 77777666653 5677888888888998887753210 00011110000 00000 0 000
Q ss_pred CCcCchhhcccc----------hHHHHHHHHHHHHCCeEeccCCCcceE--EeCCCcHHHHHHHHHHHHHH
Q 011856 412 PVYNFEDAKKSE----------TTKFARFYRGMLEEGVYFAPSQFEAGF--TSLAHSSDDIQHTITAAEKV 470 (476)
Q Consensus 412 ~~~~~~~~~~~~----------~~~~~~~~~~l~~~Gv~~~~~~~~~~~--~~~~~t~e~i~~~~~~l~~~ 470 (476)
+..-. ...|. ..-...+.+.|.++||.+.-.+...+. ++...|+++++.++++|.++
T Consensus 488 P~Klt--i~tpgi~~~g~~~~~Gipg~~v~~~L~e~gI~~E~~d~~~iLfl~s~g~t~~~~~~L~~aL~~f 556 (714)
T PRK15400 488 PIKVT--LLTPGMKKDGTMSDFGIPASIVAKYLDEHGIVVEKTGPYNLLFLFSIGIDKTKALSLLRALTDF 556 (714)
T ss_pred CceEE--EEeCCCCCCccccccCCCHHHHHHHHHHcCCEEEecCCCeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 00000 00000 111346777888999999877655543 37889999999999999876
No 361
>PLN02452 phosphoserine transaminase
Probab=99.09 E-value=3.7e-08 Score=96.94 Aligned_cols=311 Identities=10% Similarity=-0.021 Sum_probs=177.5
Q ss_pred CcHHHHHHHHHHHHh--cCC-------CCC--CCHHHHHHHHHHHhhCCCCC--eE-EEeCCHHHHHHHHHHHHHhccCC
Q 011856 116 ADDQVLAALGETMKK--GTS-------FGA--PCLLENVLAEMVISAVPSIE--MV-RFVNSGTEACMGVLRLARAFTGR 181 (476)
Q Consensus 116 ~~p~v~~a~~~~l~~--~~~-------~~~--~~~~~~~la~~l~~~~~~~e--~v-~~~~sGseA~~~al~~ar~~~~~ 181 (476)
-+++|++++.+.+.+ +.. ... ..+...+..+.|.+++.-++ +| ++..|||.++++++.. ...++
T Consensus 18 lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~f~~i~~~~~~~L~~l~~~p~~y~v~~l~Gsgt~~~ea~~~n--l~~~~ 95 (365)
T PLN02452 18 LPANVLAKAQAELYNWEGSGMSVMEMSHRGKEFLSIIQKAEADLRELLDIPDNYEVLFLQGGASTQFAAIPLN--LCKPG 95 (365)
T ss_pred CCHHHHHHHHHHHhcccccCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEeCccHHHHHHHHHh--cCCCC
Confidence 378999988877643 111 111 12455667777777764222 44 5558899999999984 22345
Q ss_pred ceEEEEeCCCCCCchhHHhh-cCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCC
Q 011856 182 ERIIKFEGCYHGHADPFLVK-AGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSG 260 (476)
Q Consensus 182 ~~ii~~~~~yhg~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G 260 (476)
+++++...+++|....-... .|...... ...... ... ..+++++ +. .++...|.+.++...+|
T Consensus 96 ~~~l~~~~G~fg~r~~~~a~~~g~~~~~~-~~~~~~--------~~~--~~~~~~~----~~-~~~~~~v~~~hnETstG 159 (365)
T PLN02452 96 DKADFVVTGSWSKKAAKEAKKYCKTNVIA-SGKDEK--------YTK--IPSVSEW----EL-TPDAKFVHICANETIHG 159 (365)
T ss_pred CeEEEEECCHHHHHHHHHHHHhCCCcEEE-ecCCCC--------CCC--CCChHHc----CC-CCCCcEEEECCCCCCCc
Confidence 67777777776644332222 22211100 000000 000 0134443 22 23567777777777778
Q ss_pred cc-cCCHHHHHHHHHHHHHhCCEEEEeccccCccccccchhhccCCCCchhhhhhhcC-CCCcEEEEEecHHHHHhhcCC
Q 011856 261 FI-APKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVAPA 338 (476)
Q Consensus 261 ~i-~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pDi~t~sK~lg-~G~~iG~~~~~~~i~~~l~~~ 338 (476)
.. .+ ++++. ++++|+|-+++=. +...-.+.+++ |+.+--|.+| .| +|.+++++++++.+...
T Consensus 160 v~~~~----~~~i~------~~~lvVDa~Ss~g--~~pidv~~~~v--~~~saqK~lGP~G--l~~v~vr~~~l~~~~~~ 223 (365)
T PLN02452 160 VEFKD----YPDVG------NVPLVADMSSNFL--SKPVDVSKYGV--IYAGAQKNVGPSG--VTIVIIRKDLIGNARPI 223 (365)
T ss_pred EecCc----ccccC------CCeEEEECCcccc--CcccCHHHcCE--EEEecccccCCCC--eEEEEEcHHHHhhcccC
Confidence 84 55 44443 3899999888511 11223344554 5667779997 34 88999999998776532
Q ss_pred CCcc--------ccCCC-CCcHHHHHHHHHHHHHhcC----CCHHHHHHHHHHHHHHHHHHHhhhcCCceEee-eeceeE
Q 011856 339 GPMY--------QAGTL-SGNPLAMTAGIHTLKRLKE----PGTYEYLNKITGELTQGIIDAGKKAGHAICGG-YISGMF 404 (476)
Q Consensus 339 ~~~~--------~~~t~-~~~~~~~aaa~aal~~~~~----~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~-~~g~~~ 404 (476)
.+.+ ..+++ +.|.....+..++|+.+.+ +...++.+++.+++++.|++...-+....+.. .....+
T Consensus 224 ~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~~G~y~~~~~~~~rs~~~v 303 (365)
T PLN02452 224 TPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAIDESNGFYVCPVEKSVRSLMNV 303 (365)
T ss_pred CCchhhHHHHHhcCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChHHhCCeEE
Confidence 1111 11233 4456666777788888765 34566667777777777776310011111101 112223
Q ss_pred EEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCC--CcceEEe--CCCcHHHHHHHHHHHHHHHHH
Q 011856 405 GFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ--FEAGFTS--LAHSSDDIQHTITAAEKVKMR 473 (476)
Q Consensus 405 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~--~~~~~~~--~~~t~e~i~~~~~~l~~~~~~ 473 (476)
.+.+. +.....+|.+.+.++|+...++. ...+|++ -.++.++++.+++.+++.-++
T Consensus 304 sF~~~-------------~~~~~~~f~~~~~~~g~~~~~G~r~~gg~R~s~yna~~~~~v~~L~~~m~~f~~~ 363 (365)
T PLN02452 304 PFTLG-------------GSELEAEFVKEAAKAGMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQAK 363 (365)
T ss_pred EEEcC-------------CchhHHHHHHHHHHCCCcccCCccccCceEEECcCCCCHHHHHHHHHHHHHHHHh
Confidence 33332 22355789999999999987763 2246775 467999999999999987654
No 362
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.07 E-value=1.6e-08 Score=99.18 Aligned_cols=308 Identities=17% Similarity=0.138 Sum_probs=152.0
Q ss_pred CcHHHHHHHHHHHHhcCC-------CCCCC----HHHHHHHHHHHhhCCCCC----eEEE-eCCHHHHHHHHHHHHHhcc
Q 011856 116 ADDQVLAALGETMKKGTS-------FGAPC----LLENVLAEMVISAVPSIE----MVRF-VNSGTEACMGVLRLARAFT 179 (476)
Q Consensus 116 ~~p~v~~a~~~~l~~~~~-------~~~~~----~~~~~la~~l~~~~~~~e----~v~~-~~sGseA~~~al~~ar~~~ 179 (476)
..|.+.+++...+.+-.. +..-. +.+.-..++..+++ +.+ .+-+ ..||+.||.+++.. ...
T Consensus 32 ~Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF-~~~~~~w~anvqp~SGs~An~av~~a--Ll~ 108 (399)
T PF00464_consen 32 MSPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELF-GAEPKEWYANVQPHSGSQANLAVYMA--LLK 108 (399)
T ss_dssp --HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHH-T-STTTEEEE---SSHHHHHHHHHHH--HT-
T ss_pred cCHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHh-CCCcccceEEeecCCchHHHHHHHHH--HHh
Confidence 357777766655544211 11112 33333344455555 434 3322 45899999999983 234
Q ss_pred CCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCC------CHHHHHHHHhcCCCCeEEEEEc
Q 011856 180 GRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFN------DVSALENLFENNKGEIAAIILE 253 (476)
Q Consensus 180 ~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~------d~~~le~~l~~~~~~~a~vi~e 253 (476)
++++|+.++...-|+..........++-. ....-+.+.++.+ |.+.++++++++ +.++||+.
T Consensus 109 pGD~Im~l~l~~GGHlshg~~~~~~~~~~----------~~~~~~~~~y~~d~~~~~ID~d~l~~~a~~~--kPklIi~G 176 (399)
T PF00464_consen 109 PGDTIMGLSLPHGGHLSHGSSVNFKKISA----------SGLYFESVPYPVDPDTGLIDYDELEKLAKEH--KPKLIICG 176 (399)
T ss_dssp TT-EEEEEEGGGT--GGGT-TTSHSBSSH----------HHHHSEEEEEEB-TTTSSB-HHHHHHHHHHH----SEEEEE
T ss_pred hcCcEEecChhhccccccccccccccccc----------ccceEEEEeeeeecCCCeECHHHHHHHHhhc--CCCEEEEC
Confidence 56778877654323211000000000000 0000011111111 799999999876 66778887
Q ss_pred ccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccc-cCc-cccccchhhccCCCCchhhh--hhhcCCCCcEEEEEec-
Q 011856 254 PVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM-TGF-RLAYGGAQEYFGVTPDLTTL--GKIIGGGLPVGAYGGR- 328 (476)
Q Consensus 254 p~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~-~g~-r~g~~~~~~~~g~~pDi~t~--sK~lg~G~~iG~~~~~- 328 (476)
...-. ...+ +++++++|++.|++|++|-.| .|+ -.| .+ ...+.. .|++|. -|+|.| -+.|.++.+
T Consensus 177 ~S~y~--~~~d----~~~~reIad~vga~l~~D~sH~~GLIa~g-~~-~~P~~~-ADvvt~sThKtl~G-PrggiI~~~~ 246 (399)
T PF00464_consen 177 ASSYP--RPID----FKRFREIADEVGAYLMADISHIAGLIAGG-LF-PNPFPY-ADVVTGSTHKTLRG-PRGGIILTNK 246 (399)
T ss_dssp -SSTS--S-------HHHHHHHHHHTT-EEEEE-TTTHHHHHTT-SS---GCCT-SSEEEEESSGGG-S-SS-EEEEES-
T ss_pred chhcc--CccC----HHHHHHHHHhcCcEEEecccccccceehh-ee-cCcccc-ceEEEeeccccccc-cCceEEEEcC
Confidence 64321 1233 899999999999999999999 676 333 22 123333 688865 499974 467777888
Q ss_pred -------------HHHHHhhcCCCCccccCCCCCcHHHHHHHH-HHHHHhcC---CCHHHHHHHHHHHHHHHHHHHhhhc
Q 011856 329 -------------RDIMEMVAPAGPMYQAGTLSGNPLAMTAGI-HTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKA 391 (476)
Q Consensus 329 -------------~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~-aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~ 391 (476)
+++.+.+.. ...-+..+++.....|++ .++....+ .++.+++.++.+.|.+.|.+.+.+.
T Consensus 247 ~~~~~~~~~~~~~~~l~~~I~~---avfP~~qg~~h~~~iaalAval~ea~~~~fk~Ya~qVv~NAk~La~~L~~~G~~v 323 (399)
T PF00464_consen 247 GSKNVDKKGKEIDEELAEKIDS---AVFPGLQGGPHMHRIAALAVALKEALSPEFKEYAKQVVKNAKALAEALQERGFKV 323 (399)
T ss_dssp SEEEE-TTS-EEEHHHHHHHHH---HHTTTT-SS--HHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTT-EE
T ss_pred CccccCCcccccHHHHHHHhcc---ccCCCcccCcchhHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHhhCCcEE
Confidence 778887763 111112222222222222 33444333 5677888899999999988864332
Q ss_pred CCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCC---------CcceEEe------CCCc
Q 011856 392 GHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ---------FEAGFTS------LAHS 456 (476)
Q Consensus 392 ~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~---------~~~~~~~------~~~t 456 (476)
... .-...++++++.... ....++.+.|.+.||.+.... ...+|+. -...
T Consensus 324 --~~g-gTd~H~vlvd~~~~~------------~~g~~a~~~Le~~gI~vnkn~iP~d~~~~~~sGlRlGT~~lT~rG~~ 388 (399)
T PF00464_consen 324 --VTG-GTDNHQVLVDLRSFG------------IDGKEAEKALEEAGIIVNKNTIPGDRSPFVPSGLRLGTPALTRRGMK 388 (399)
T ss_dssp --GGG-S-SSSEEEEEGGGGT------------S-HHHHHHHHHHTTEE-EEE--TTTSTTTT-SEEEEESHHHHHTT--
T ss_pred --EEC-CCCCCeEEEEecccc------------cchHHHHHHHHhcCeeecccccCCCCCCCCCCEEEECCHHHHhCCCC
Confidence 110 113345566653211 112456677778899886431 1246773 4557
Q ss_pred HHHHHHHHHH
Q 011856 457 SDDIQHTITA 466 (476)
Q Consensus 457 ~e~i~~~~~~ 466 (476)
++|++++.+.
T Consensus 389 e~dm~~iA~~ 398 (399)
T PF00464_consen 389 EEDMKEIAEL 398 (399)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhh
Confidence 7777776553
No 363
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.07 E-value=8.8e-08 Score=104.14 Aligned_cols=310 Identities=11% Similarity=0.139 Sum_probs=169.3
Q ss_pred EEecccChhhccCCC-CcHHHHHHHHHHHHhcCCCC-CCC-------HHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHH
Q 011856 101 YIDYVGSWGPAIIGH-ADDQVLAALGETMKKGTSFG-APC-------LLENVLAEMVISAVP-SIEMVRFVNSGTEACMG 170 (476)
Q Consensus 101 ~iD~~~~~~~~~lG~-~~p~v~~a~~~~l~~~~~~~-~~~-------~~~~~la~~l~~~~~-~~e~v~~~~sGseA~~~ 170 (476)
|.+|.+. .+.+| -++.|.+++.+...-.+.|+ |.. +...++...++++++ +.+++-++.++|.+.++
T Consensus 104 ~~~fiG~---G~y~~~~P~~v~~~i~~~~~~~TaytPYqaEisQG~lqal~~~Qt~ia~LtG~~~anaSL~d~aTAaaea 180 (993)
T PLN02414 104 FKSYIGM---GYYNTHVPPVILRNILENPGWYTQYTPYQAEIAQGRLESLLNYQTMITDLTGLPMSNASLLDEGTAAAEA 180 (993)
T ss_pred cccccCC---CCCCccCCHHHHHHHHhChHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHhCCChhhEeecCChHHHHHH
Confidence 4454443 55566 56677688877655433333 221 223466777888876 56789999999999997
Q ss_pred HHHHHHhcc--CCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeE
Q 011856 171 VLRLARAFT--GRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIA 248 (476)
Q Consensus 171 al~~ar~~~--~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a 248 (476)
++... ..+ ++++|++.+..| ..+...+..... ..|+ ++..++..+.+ ...+.++
T Consensus 181 ~~~a~-~~~~g~~~~VlVs~~~h-P~~~~v~~t~a~---------~~Gi------eV~~v~~~~~~-------~~~~~v~ 236 (993)
T PLN02414 181 MAMCN-NILKGKKKKFLIASNCH-PQTIDVCQTRAD---------GLGL------EVVVADEKDFD-------YSSGDVC 236 (993)
T ss_pred HHHHH-hcccCCCCEEEEcCccC-HhHHHHHHHhhh---------hcCC------EEEEecchhhc-------cccCceE
Confidence 77633 333 335666655544 444333322100 0111 24444432211 1122455
Q ss_pred EEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEE--eccccCccccccchhhccCCCCchhhh-hhhcC-----CCC
Q 011856 249 AIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF--DEVMTGFRLAYGGAQEYFGVTPDLTTL-GKIIG-----GGL 320 (476)
Q Consensus 249 ~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~--DEv~~g~r~g~~~~~~~~g~~pDi~t~-sK~lg-----~G~ 320 (476)
+++ ..+.+..|.+.+ +++|.++|+++|+++++ |-+..+. . -....+ ..|+++. ++.++ ||-
T Consensus 237 ~vl-vq~P~~~G~v~d----v~~I~~~ah~~GaL~iVaad~lal~~-l---~~pge~--GADi~vgsgqKwg~P~G~GGP 305 (993)
T PLN02414 237 GVL-VQYPATDGEVLD----YAEFVKNAHANGVKVVMATDLLALTM-L---KPPGEW--GADIVVGSAQRFGVPMGYGGP 305 (993)
T ss_pred EEE-EecCCCCeEEcC----HHHHHHHHHHcCCEEEEEECHHHhcC-C---CCHhhc--cCcEEEECCCccccCCCCCCC
Confidence 554 334456899988 99999999999999999 4332111 0 011122 3466642 22223 454
Q ss_pred cEEEEEecHHHHHhhcCC----------CCcc---------c--cCCCCCcHH---HHHHHHHHH--HHhcC---CCHHH
Q 011856 321 PVGAYGGRRDIMEMVAPA----------GPMY---------Q--AGTLSGNPL---AMTAGIHTL--KRLKE---PGTYE 371 (476)
Q Consensus 321 ~iG~~~~~~~i~~~l~~~----------~~~~---------~--~~t~~~~~~---~~aaa~aal--~~~~~---~~~~~ 371 (476)
..|++.+++++.+.+-.. .+.+ | .-....|.- +..+++++. ..+.. ++..+
T Consensus 306 ~aGflavr~~~~r~~PgriVG~s~d~~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ 385 (993)
T PLN02414 306 HAAFLATSQEYKRLMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQ 385 (993)
T ss_pred CeeEEEECHHHHhhCCCcccCcccCCCCCcccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhccccHHHHHH
Confidence 589999999886644210 0110 0 001112332 222333222 11121 44567
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCCcceEE
Q 011856 372 YLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT 451 (476)
Q Consensus 372 ~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~ 451 (476)
++.++..+++++|.+.+. .+... .....+.+.+ ++ ..++.+.|.++||.++....+.+++
T Consensus 386 ri~~la~~l~~~L~~~G~--~~~~~--~~f~~vt~~~-------------~~---~~~v~~~L~~~gI~l~~~~~~~lrv 445 (993)
T PLN02414 386 RVHGLAGVFAAGLKKLGF--QVQSL--PFFDTVKVKC-------------SD---ADAIADAAAKVGINLRVVDANTVTV 445 (993)
T ss_pred HHHHHHHHHHHHHhhcCC--ccCCC--CCcCeEEEec-------------CC---HHHHHHHHHHCCCeeEEecCCeEEE
Confidence 788888888888866431 11111 1111122221 11 1578899999999887665445555
Q ss_pred --eCCCcHHHHHHHHHHHH
Q 011856 452 --SLAHSSDDIQHTITAAE 468 (476)
Q Consensus 452 --~~~~t~e~i~~~~~~l~ 468 (476)
...+|++|||.++++|.
T Consensus 446 s~~e~~T~edId~L~~~l~ 464 (993)
T PLN02414 446 SFDETTTLEDVDKLFKVFA 464 (993)
T ss_pred EeeccCCHHHHHHHHHHHc
Confidence 46789999999999996
No 364
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.04 E-value=7.6e-08 Score=94.75 Aligned_cols=289 Identities=11% Similarity=0.026 Sum_probs=155.6
Q ss_pred HHHHHHHHHHHhhCCC---CCeEEEeCCHHHHHHHHHHHHHhcc--CCceEEEEeCCCCCCchh--HHhhcCCC-CccCC
Q 011856 139 LLENVLAEMVISAVPS---IEMVRFVNSGTEACMGVLRLARAFT--GRERIIKFEGCYHGHADP--FLVKAGSG-VATLG 210 (476)
Q Consensus 139 ~~~~~la~~l~~~~~~---~e~v~~~~sGseA~~~al~~ar~~~--~~~~ii~~~~~yhg~~~~--~~~~~g~~-~~~~~ 210 (476)
+...+..+.|.+.+.. .+-++++.|||.++++++.. +. +++++++. + ++|.... .+...|.+ +..
T Consensus 39 ~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~n---l~~~~g~~vLv~-g-~FG~r~~~eia~~~g~~~v~~-- 111 (374)
T TIGR01365 39 EKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWS---MLGCRGVDVLAW-E-SFGKGWVTDVTKQLKLPDVRV-- 111 (374)
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHH---cCCCCCCeEEEE-C-HHHHHHHHHHHHhcCCCCcEE--
Confidence 4455666677777642 22356799999999999994 33 34466653 3 5554322 22223331 222
Q ss_pred CCCCCCCCCCCCCceeeccCC---CHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHH-hCCEEEEe
Q 011856 211 LPDSPGVPKGATYETLTAPFN---DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKE-NGALLIFD 286 (476)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~---d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~-~g~llI~D 286 (476)
+.+++. |+++++. + .. |.+..+-..+|...| ++ +++++ +++++|+|
T Consensus 112 ---------------l~~~~g~~~~~~~ve~--~---~~---v~~vhnETSTGv~np----v~---~i~~~~~~~lliVD 161 (374)
T TIGR01365 112 ---------------LEAEYGKLPDLKKVDF--K---ND---VVFTWNGTTSGVRVP----NG---DFIPADREGLTICD 161 (374)
T ss_pred ---------------EcCCCCCCCCHHHcCC--C---CC---EEEecCCCchheecc----cc---ccccccCCCcEEEE
Confidence 222332 5676652 1 12 344444455788887 44 33333 58999999
Q ss_pred ccccCccccccchhhccCCCCchh--hhhhhcCCCCcEEEEEecHHHHHhhcCCCC-----c--------------cccC
Q 011856 287 EVMTGFRLAYGGAQEYFGVTPDLT--TLGKIIGGGLPVGAYGGRRDIMEMVAPAGP-----M--------------YQAG 345 (476)
Q Consensus 287 Ev~~g~r~g~~~~~~~~g~~pDi~--t~sK~lg~G~~iG~~~~~~~i~~~l~~~~~-----~--------------~~~~ 345 (476)
-+-+ |. +..+-.+ + .|++ +-.|+|++---++.++.+++.++......+ . ....
T Consensus 162 avSs-~g-~~~l~~d--~--iDv~~tgsQK~L~~ppGls~v~vs~~Al~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~ 235 (374)
T TIGR01365 162 ATSA-AF-AQDLDYH--K--LDVVTFSWQKVLGGEGAHGMLILSPRAVARLESYTPAWPLPKIFRLTKGGKLNKKIFEGS 235 (374)
T ss_pred ccch-hc-CCCCChh--H--CcEEEEechhccCCCCceEEEEECHHHHHHHhhcCCCCCChhhhccccccchhhhhhcCC
Confidence 7664 20 1112222 2 5665 355999841127888889988776542111 0 0112
Q ss_pred CC-CCcHHHHHHHHHHHHHhcC----CCHHHHHHHHHHHHHHHHHHHhhhcCCce--EeeeeceeEEEEEecCCCcCchh
Q 011856 346 TL-SGNPLAMTAGIHTLKRLKE----PGTYEYLNKITGELTQGIIDAGKKAGHAI--CGGYISGMFGFFFTEGPVYNFED 418 (476)
Q Consensus 346 t~-~~~~~~~aaa~aal~~~~~----~~~~~~~~~~~~~l~~~L~~~~~~~~~~~--~v~~~g~~~~i~~~~~~~~~~~~ 418 (476)
|. ..+..+..+...+|+.+.+ ++..++.+++.+.+++.++++..-..... ..+ .-....+.+..+.+....
T Consensus 236 t~~TP~v~~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l~~~~~~~~~r-S~tvt~v~~~~~~~~~~~- 313 (374)
T TIGR01365 236 TINTPSMLCVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAKNNWIHFLAETPEIR-SNTSVCLKVVDPAIDALD- 313 (374)
T ss_pred CCCChHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCChhhc-CCCeEEEEeCCccccccc-
Confidence 32 2333444555566665544 34566666777777777776641111111 111 111223333211110000
Q ss_pred hcccchHHHHHHHHHHHHCCeEeccCCC----cceEE--eCCCcHHHHHHHHHHHHHHHHH
Q 011856 419 AKKSETTKFARFYRGMLEEGVYFAPSQF----EAGFT--SLAHSSDDIQHTITAAEKVKMR 473 (476)
Q Consensus 419 ~~~~~~~~~~~~~~~l~~~Gv~~~~~~~----~~~~~--~~~~t~e~i~~~~~~l~~~~~~ 473 (476)
..+..+...++.+.|.++||.+.++.. ..+|+ .-.++.+|++.+++.|+=+.++
T Consensus 314 -~~~~~~~~~~~~~~l~~~gi~i~~G~~~~~~~~fRIg~~G~i~~~di~~l~~~l~~~~~~ 373 (374)
T TIGR01365 314 -EDAQADFAKELISTLEKEGVAYDIGSYRDAPSGLRIWCGATVEKSDLECLCPWLDWAFAL 373 (374)
T ss_pred -cchhhHHHHHHHHHHHHCCEEEeccccccCCCceEEecCCcCCHHHHHHHHHHHHHHHhc
Confidence 001111136788999999998887643 45677 3567999999999999877654
No 365
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.01 E-value=8.1e-08 Score=91.23 Aligned_cols=290 Identities=14% Similarity=0.111 Sum_probs=157.3
Q ss_pred HHHHHHHHHhhCC-CCCeEEEeCCHHHH-HHHHHHHHHhc--c---------CCceEEEEeCCCCCCchhHHhhcCCCCc
Q 011856 141 ENVLAEMVISAVP-SIEMVRFVNSGTEA-CMGVLRLARAF--T---------GRERIIKFEGCYHGHADPFLVKAGSGVA 207 (476)
Q Consensus 141 ~~~la~~l~~~~~-~~e~v~~~~sGseA-~~~al~~ar~~--~---------~~~~ii~~~~~yhg~~~~~~~~~g~~~~ 207 (476)
..++.+.+++.++ ..++++...+.|-. +.-++..+..+ . ++-+++...++|-.+ ...+..-|-
T Consensus 71 ipe~r~l~a~llgv~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRH-Fai~E~~Gi--- 146 (425)
T PF12897_consen 71 IPEARELFAELLGVPPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRH-FAITEHFGI--- 146 (425)
T ss_dssp -HHHHHHHHHHHTS-GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHH-HHHHHHCT----
T ss_pred hHHHHHHHHHHhCCCHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHH-HHHHHhhCc---
Confidence 3455555555554 56777765544444 44444433222 1 245788888888653 233322222
Q ss_pred cCCCCCCCCCCCCCCCceeeccCC----CHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHH-HHHhCCE
Q 011856 208 TLGLPDSPGVPKGATYETLTAPFN----DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRI-TKENGAL 282 (476)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~----d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l-~~~~g~l 282 (476)
+.+.+|.+ |++.+|+++.+. +.++.++|-|.++|...+..+++-.++|.++ +...++.
T Consensus 147 ----------------emi~VpM~~dGPDmD~Ve~LV~~D-~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFR 209 (425)
T PF12897_consen 147 ----------------EMIPVPMTEDGPDMDMVEELVAED-PSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFR 209 (425)
T ss_dssp ----------------EEEEEEEETTEE-HHHHHHHTHTS-TTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-E
T ss_pred ----------------EEEecCCCCCCCCHHHHHHHHhcC-CccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeE
Confidence 34445543 899999999754 4799999999998855556677778888888 4468999
Q ss_pred EEEecccc--Ccc-ccccc-------hhhccCCCCchh----hhhhhcCCCCcEEEEEecHHHHHhhcCCCCccccCCCC
Q 011856 283 LIFDEVMT--GFR-LAYGG-------AQEYFGVTPDLT----TLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLS 348 (476)
Q Consensus 283 lI~DEv~~--g~r-~g~~~-------~~~~~g~~pDi~----t~sK~lg~G~~iG~~~~~~~i~~~l~~~~~~~~~~t~~ 348 (476)
++.|.+|+ .+. ....- ..+..| .||.+ +.||.--+|-.++++.++++-++.+.+ .....|.+
T Consensus 210 I~WDNAY~vHhL~~~~~~~~~~nil~~~~~AG-npdrv~~F~STSKITf~GaGva~~aaS~~Nl~~~~~---~~~~~tIg 285 (425)
T PF12897_consen 210 IFWDNAYAVHHLYDEEPRDALLNILDACAKAG-NPDRVYVFASTSKITFPGAGVAFFAASEANLAWIKK---HLSVQTIG 285 (425)
T ss_dssp EEEE-TTTT-BSSSSSS------HHHHHHHTT--TTSEEEEEESTTTS-TTSS-EEEEE-HHHHHHHHH---HHHHH-S-
T ss_pred EEeecCceEeeccccccchhhhHHHHHHHHcC-CCCeEEEEecccccccCCcceeeeecCHHHHHHHHH---HhcCceeC
Confidence 99999995 111 11000 001111 35533 689976667779999999988877762 23344566
Q ss_pred CcHHHHHHHHHHHHHhcC-C-CHHHHHHHHHHHHHHHHHH-------Hhh-hcCC-ceEeeeeceeEEEEEecCCCcCch
Q 011856 349 GNPLAMTAGIHTLKRLKE-P-GTYEYLNKITGELTQGIID-------AGK-KAGH-AICGGYISGMFGFFFTEGPVYNFE 417 (476)
Q Consensus 349 ~~~~~~aaa~aal~~~~~-~-~~~~~~~~~~~~l~~~L~~-------~~~-~~~~-~~~v~~~g~~~~i~~~~~~~~~~~ 417 (476)
.+-+.|..-.. ++.+ + .+.++.++..+.++-+++. .+. ..++ .+..+..|.|+.++..+.
T Consensus 286 pdKvNQLRHvr---ff~d~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~GGYFIsld~~~G------ 356 (425)
T PF12897_consen 286 PDKVNQLRHVR---FFKDAEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTKPKGGYFISLDVLDG------ 356 (425)
T ss_dssp --HHHHHHHHH---HHHSHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE---SBSS-EEEEESTT------
T ss_pred ccHHHHHHHHH---HhcChhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCCCceEEEEecCCC------
Confidence 66666554333 3444 4 6778888877777655432 222 3333 344556677778776442
Q ss_pred hhcccchHHHHHHHHHHHHCCeEeccCC--Cc--------ceEE-eCCCcHHHHHHHHHHHHHHHH
Q 011856 418 DAKKSETTKFARFYRGMLEEGVYFAPSQ--FE--------AGFT-SLAHSSDDIQHTITAAEKVKM 472 (476)
Q Consensus 418 ~~~~~~~~~~~~~~~~l~~~Gv~~~~~~--~~--------~~~~-~~~~t~e~i~~~~~~l~~~~~ 472 (476)
.+.++++.+.+.||.+.+.+ ++ .+|+ +..-+.+|++.+++.+.-++.
T Consensus 357 --------~AkrvV~lakeAGV~LT~AGAtfPyg~DP~D~nIRiAPS~P~leel~~Am~~~~~cv~ 414 (425)
T PF12897_consen 357 --------TAKRVVELAKEAGVALTPAGATFPYGKDPRDSNIRIAPSYPSLEELETAMDVFATCVK 414 (425)
T ss_dssp ---------HHHHHHHHHHTTEE---TTTTSGGG--TTS-EEEE--SSS-HHHHHHHHHHHHHHHH
T ss_pred --------hHHHHHHHHHHhCceeCCCCCCCCCCCCCCCCcEEecCCCCCHHHHHHHHHHHHHHHH
Confidence 24788999999999998854 11 3577 556689999999998876653
No 366
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.01 E-value=1.3e-07 Score=90.60 Aligned_cols=301 Identities=17% Similarity=0.183 Sum_probs=177.7
Q ss_pred HHHHHHHHHHHhhCCCCCeEEE-eCCHHHHHHHHHHHHHhcc-----CCceEEEEeCCCCCCchhHHhhcCCCCccCCCC
Q 011856 139 LLENVLAEMVISAVPSIEMVRF-VNSGTEACMGVLRLARAFT-----GRERIIKFEGCYHGHADPFLVKAGSGVATLGLP 212 (476)
Q Consensus 139 ~~~~~la~~l~~~~~~~e~v~~-~~sGseA~~~al~~ar~~~-----~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~ 212 (476)
++..+|.++|++.. +.|.|.+ -|+|+++=.+.+.+.|+|- +.+++++...+-||.-.......|..+..+...
T Consensus 109 ~li~~Lq~~L~~IT-G~DavsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNPASAam~G~~VV~V~~~ 187 (496)
T COG1003 109 ELIYELQEWLKEIT-GMDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNPASAAMAGFKVVVVKCD 187 (496)
T ss_pred HHHHHHHHHHHHhc-CCceeeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCChhhHhhcCceEEEEecC
Confidence 44568888998888 7777766 4688888888777777762 245667777789998777777777765543322
Q ss_pred CCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccc---
Q 011856 213 DSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM--- 289 (476)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~--- 289 (476)
....+ |+++|++.+.+ +++++.+... ++-|.. +++ +.+|+++.+++|..|..|-+-
T Consensus 188 ~~G~V--------------DlddLk~k~~~---~~AalMiTnP-sT~GvF--E~~-I~ei~~ivH~~Gg~vY~DGANlNA 246 (496)
T COG1003 188 ENGNV--------------DLDDLRAKAED---NLAALMITNP-STLGVF--EED-IREICEIVHEAGGQVYYDGANLNA 246 (496)
T ss_pred CCCCc--------------cHHHHHHHhcc---ceeEEEeccC-cccccc--hhh-HHHHHHHHHHcCCEEEecCcchhh
Confidence 22222 89999999873 6776655432 334543 334 999999999999999999765
Q ss_pred -cCc-cccccch-hhccCCCCchhhhhhhcCC-CCcEEEEEecHHHHHhhcC------CCC----------ccccCCCCC
Q 011856 290 -TGF-RLAYGGA-QEYFGVTPDLTTLGKIIGG-GLPVGAYGGRRDIMEMVAP------AGP----------MYQAGTLSG 349 (476)
Q Consensus 290 -~g~-r~g~~~~-~~~~g~~pDi~t~sK~lg~-G~~iG~~~~~~~i~~~l~~------~~~----------~~~~~t~~~ 349 (476)
.|. |.|.++. ..|+++. -||+=--|| |-..|-+.++.++...+-. ... ......+-+
T Consensus 247 ~vG~~rPGd~G~DV~HlNLH---KTF~iPHGGGGPG~GPvgVk~~L~pfLP~p~~~~~~~~y~~~~~~~~s~g~~~a~~G 323 (496)
T COG1003 247 IVGLARPGDMGFDVVHLNLH---KTFCIPHGGGGPGAGPVGVKAHLAPFLPGPVVYHDVGEYRLDYDGKKSIGVSAAPYG 323 (496)
T ss_pred hhccccccccccceEEeecc---cccccCCCCCCCCCCceehHhhccccCCCCcccCCCccccccCCCCccceeeccccC
Confidence 466 6665432 1222211 034433343 3456777777777665431 000 001223444
Q ss_pred cHHHHHHHHHHHHHhcCCCH---HHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHH
Q 011856 350 NPLAMTAGIHTLKRLKEPGT---YEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTK 426 (476)
Q Consensus 350 ~~~~~aaa~aal~~~~~~~~---~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ 426 (476)
|......+.+.+..+..+.+ -+..--+..|+.++|+.. ++++. .+.. ...-++.-+ ...........
T Consensus 324 s~~il~~a~~YI~~mG~~GL~~ase~AvLNANYia~rL~~~---y~~~y--~~~~-~~~HE~ild----~r~l~~~~Gv~ 393 (496)
T COG1003 324 SASILPIAWAYIRMMGADGLKQASEVAVLNANYIARRLKGY---YPVPY--TGEN-RVAHECILD----ARPLKKETGVR 393 (496)
T ss_pred cchHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhhc---Ccccc--CCCC-cceeEEEee----chHhHhhcCCc
Confidence 55555555566655544333 344445677888888763 33221 1111 122222110 00011111233
Q ss_pred HHHHHHHHHHCCeEeccCCCc-----ceEE-e-CCCcHHHHHHHHHHHHHHHHHh
Q 011856 427 FARFYRGMLEEGVYFAPSQFE-----AGFT-S-LAHSSDDIQHTITAAEKVKMRF 474 (476)
Q Consensus 427 ~~~~~~~l~~~Gv~~~~~~~~-----~~~~-~-~~~t~e~i~~~~~~l~~~~~~~ 474 (476)
...+++.|++.|++.-...++ .+.+ + =.-+.+++|++++++.++.++.
T Consensus 394 ~~DvAKrLlD~GfHaPT~~FPliV~~tLMIEPTEsEsk~eLDrf~dami~I~~Ea 448 (496)
T COG1003 394 ALDVAKRLLDYGFHAPTMYFPLIVAGTLMIEPTESESKEELDRFIDAMIAIREEA 448 (496)
T ss_pred HHHHHHHHHhcCCCCCcccCccccccceeecCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 568899999999976555444 2233 2 3447899999999999887653
No 367
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=98.98 E-value=6.4e-08 Score=95.75 Aligned_cols=175 Identities=23% Similarity=0.242 Sum_probs=110.1
Q ss_pred CHHHHHHHHHHHhhCCCC--------CeEEEeCCHHHHHHHHHHHHHhcc-------C----CceEEEEeCCCCCCchhH
Q 011856 138 CLLENVLAEMVISAVPSI--------EMVRFVNSGTEACMGVLRLARAFT-------G----RERIIKFEGCYHGHADPF 198 (476)
Q Consensus 138 ~~~~~~la~~l~~~~~~~--------e~v~~~~sGseA~~~al~~ar~~~-------~----~~~ii~~~~~yhg~~~~~ 198 (476)
.+.+.++.+++++.++-+ -.-+||+|||++|..|+..||... + .+.+++....-|-+..-+
T Consensus 78 ~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~~Ka 157 (373)
T PF00282_consen 78 TEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYSIEKA 157 (373)
T ss_dssp HHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THHHHH
T ss_pred ccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccHHHHh
Confidence 467788889999988522 257899999999999999887541 1 234666666667777777
Q ss_pred HhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcC--CCCeE-EEEEcccCCCCCcccCCHHHHHHHHHH
Q 011856 199 LVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENN--KGEIA-AIILEPVVGNSGFIAPKPDFLNAIRRI 275 (476)
Q Consensus 199 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~--~~~~a-~vi~ep~~~~~G~i~~~~~~l~~l~~l 275 (476)
+...|.++..++......+ |+++|++.+++. .+.+. +|+..--..+.|.+.| +++|.++
T Consensus 158 a~~lGlg~~~I~~~~~~~m--------------d~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~----l~~i~~i 219 (373)
T PF00282_consen 158 ARILGLGVRKIPTDEDGRM--------------DIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDP----LEEIADI 219 (373)
T ss_dssp HHHTTSEEEEE-BBTTSSB---------------HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-S----HHHHHHH
T ss_pred cceeeeEEEEecCCcchhh--------------hHHHhhhhhcccccccccceeeeccCCCcccccccC----HHHHhhh
Confidence 7777765443322111111 789999888642 11233 4444544456888988 9999999
Q ss_pred HHHhCCEEEEeccccCc-cccccchhhccCC-CCchhh--hhhhcCCCCcEEEEEecHH
Q 011856 276 TKENGALLIFDEVMTGF-RLAYGGAQEYFGV-TPDLTT--LGKIIGGGLPVGAYGGRRD 330 (476)
Q Consensus 276 ~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~-~pDi~t--~sK~lg~G~~iG~~~~~~~ 330 (476)
|++|+++|.+|-++.|. ......-.-..++ ..|-++ .-|.++..++.|+++.+.+
T Consensus 220 ~~~~~~wlHVDaA~gg~~~~~~~~~~~~~gi~~adSit~d~HK~l~~P~~~~~~l~r~~ 278 (373)
T PF00282_consen 220 CEKYNIWLHVDAAYGGSALLSPEYRHLLFGIERADSITIDPHKWLGVPYGCGVLLVRDK 278 (373)
T ss_dssp HHHCT-EEEEEETTGGGGGGHCTTGGGGTTGGGESEEEEETTTTTS-SSS-EEEEESSG
T ss_pred ccccceeeeecccccccccccccccccccccccccccccchhhhhcCCccceeEEeecc
Confidence 99999999999999873 1111111112232 235454 5699887788999977654
No 368
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=98.93 E-value=1.4e-07 Score=90.76 Aligned_cols=226 Identities=17% Similarity=0.238 Sum_probs=143.3
Q ss_pred cCCC--CcHHHHHHHHHHHHhcCC--CC-CCC---HHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCce
Q 011856 112 IIGH--ADDQVLAALGETMKKGTS--FG-APC---LLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRER 183 (476)
Q Consensus 112 ~lG~--~~p~v~~a~~~~l~~~~~--~~-~~~---~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ 183 (476)
++|- -+|++.+++.+.+..... +. ... .-...+++.++... +.+.+..+|.-+.|+..++- ++..+..
T Consensus 33 ~lG~s~~~~e~iea~~~~~~~~v~Le~~l~~g~~~~R~~~~~~~~~~~~-~aea~~ivnnn~aAVll~~~---al~~~~E 108 (395)
T COG1921 33 NLGRSLYSPEAIEAMKEAMRAPVELETDLKTGKRGARLTELAELLCGLT-GAEAAAIVNNNAAAVLLTLN---ALAEGKE 108 (395)
T ss_pred cCCCccCCHHHHHHHHHHhcccceeeeecccchhhHHHHHHHHHHhccc-chhheeeECCcHHHHHHHHh---hhccCCe
Confidence 4554 379999999988876321 11 111 11224455554444 67889999989999888887 4554545
Q ss_pred EEEEeC----CCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCC
Q 011856 184 IIKFEG----CYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNS 259 (476)
Q Consensus 184 ii~~~~----~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~ 259 (476)
+|+..+ ++|......+...|.+....... + .....+++.++.++. ....-+..++++..
T Consensus 109 vVis~g~lV~gg~~~v~d~~~~aG~~l~EvG~t---n-------------~t~~~d~~~AIne~t-a~llkV~s~~~~f~ 171 (395)
T COG1921 109 VVVSRGELVEGGAFRVPDIIRLAGAKLVEVGTT---N-------------RTHLKDYELAINENT-ALLLKVHSSNYGFT 171 (395)
T ss_pred EEEEccccccCCCCChhHHHHHcCCEEEEeccc---C-------------cCCHHHHHHHhccCC-eeEEEEeecccccc
Confidence 554322 46666667777776654332111 0 115788999998641 22233445555545
Q ss_pred CcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccchhhccCCCCchhhhh--hhcCCCCcEEEEEecHHHHHhhc
Q 011856 260 GFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLTTLG--KIIGGGLPVGAYGGRRDIMEMVA 336 (476)
Q Consensus 260 G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pDi~t~s--K~lg~G~~iG~~~~~~~i~~~l~ 336 (476)
+.+. ++++.++|++||+++|+|..-... + -.....+.+...+|++++| |.|+ |.+.|.++|++++++.++
T Consensus 172 ~~l~-----~~~l~~ia~~~~lpvivD~aSg~~v~-~e~~l~~~la~GaDLV~~SgdKllg-GPqaGii~GkKelI~~lq 244 (395)
T COG1921 172 GMLS-----EEELVEIAHEKGLPVIVDLASGALVD-KEPDLREALALGADLVSFSGDKLLG-GPQAGIIVGKKELIEKLQ 244 (395)
T ss_pred cccc-----HHHHHHHHHHcCCCEEEecCCccccc-cccchhHHHhcCCCEEEEecchhcC-CCccceEechHHHHHHHH
Confidence 5443 788999999999999999876322 2 1122234455568999887 8777 456888899999999987
Q ss_pred CCCCccccCCCCCcHHHHHHHHHHHHHhcCCC
Q 011856 337 PAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPG 368 (476)
Q Consensus 337 ~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~ 368 (476)
... ..-.+-......++..++|+....++
T Consensus 245 ~~~---l~Ralrv~K~tla~l~~aLe~y~~~~ 273 (395)
T COG1921 245 SHP---LKRALRVDKETLAALEAALELYLQPE 273 (395)
T ss_pred hhh---hhhhhhcCcHhHHHHHHHHHHHcCch
Confidence 421 12234456778888889999877643
No 369
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=98.88 E-value=2.7e-06 Score=81.81 Aligned_cols=283 Identities=14% Similarity=0.176 Sum_probs=159.9
Q ss_pred HHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCC
Q 011856 143 VLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGA 221 (476)
Q Consensus 143 ~la~~l~~~~~-~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 221 (476)
++-..++++++ +.-+.-....+|.+-|+++..-|...++.+-++.+...|-.+...+..... ..
T Consensus 124 efQtlv~dLTGm~VANASm~DeaTAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~---------------~~ 188 (450)
T COG0403 124 EFQTLVADLTGLDVANASMLDEATAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLRTRAE---------------GL 188 (450)
T ss_pred HHHHHHHHHhCCCcccchhhhhHHHHHHHHHHHHHhhcCcCceEEecCCCCHHHHHHHHhhcc---------------cC
Confidence 45556666664 333445556666666666654334333445555566677766666543211 11
Q ss_pred CCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEE--eccccCc--ccccc
Q 011856 222 TYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF--DEVMTGF--RLAYG 297 (476)
Q Consensus 222 ~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~--DEv~~g~--r~g~~ 297 (476)
+-.+..++++|+++|++. .. +++.+++++-++.-|..+.. ++.|.+.++++|+++++ |=.-.++ .+|.+
T Consensus 189 g~~i~~~~~~d~~~l~~~-~~--~~~~gv~vQyP~~~G~~~~d----~~~l~~~~h~~~al~~v~aDplaL~LL~pPGe~ 261 (450)
T COG0403 189 GIEIEVVDADDLDDLESA-DD--GDVFGVLVQYPNTFGIVEED----LRALIEAAHSAGALVIVAADPLALGLLKPPGEF 261 (450)
T ss_pred ceEEEEeccchhhhhhhc-cc--cCeEEEEEecCCCCCccchh----HHHHHHHHhhcCCEEEEEechhHhhccCCcccc
Confidence 124667777788888888 43 37888988866544435554 99999999999998774 5444444 33433
Q ss_pred chhhccCCCCchhh-----hhhhcC-CCCcEEEEEecHHHHHhhcC----------CCCc---------------cccCC
Q 011856 298 GAQEYFGVTPDLTT-----LGKIIG-GGLPVGAYGGRRDIMEMVAP----------AGPM---------------YQAGT 346 (476)
Q Consensus 298 ~~~~~~g~~pDi~t-----~sK~lg-~G~~iG~~~~~~~i~~~l~~----------~~~~---------------~~~~t 346 (476)
+ .||++ ||=-++ ||--.|++.++++++..+-- ..+. .-.+.
T Consensus 262 G--------ADIvvG~~QrfGvPmgfGGPhag~fA~~~~~~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSN 333 (450)
T COG0403 262 G--------ADIVVGSAQRFGVPMGFGGPHAGYFAVKDEFKRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSN 333 (450)
T ss_pred C--------CceEEecCcccCCCcCCCCcceeeeeEhHhHhhcCCCceeeeeecCCCCchhhhhHHHHHHHHhhhccchh
Confidence 3 25552 565566 66678999999988765420 0000 01222
Q ss_pred CCCcHHHHHHHHHHHH-HhcC---CCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhccc
Q 011856 347 LSGNPLAMTAGIHTLK-RLKE---PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKS 422 (476)
Q Consensus 347 ~~~~~~~~aaa~aal~-~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~ 422 (476)
.+.|..-++-+.+..- .+.. .++-++..++..++.++|++....+ .+.....|--+.+.- +
T Consensus 334 ICTnQaLlA~~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~----~~~~~~fFdt~~v~~-----------~ 398 (450)
T COG0403 334 ICTNQALLALAASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIGAGV----ELVFDHFFDTFTVRV-----------P 398 (450)
T ss_pred hhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhcCCce----EeccccceeeEEEec-----------c
Confidence 2333322222211111 1221 3455667777778888887653211 111112222222211 1
Q ss_pred chHHHHHHHHHHHHCCeEeccCCCcceEEe--CCCcHHHHHHHHHHHHHHH
Q 011856 423 ETTKFARFYRGMLEEGVYFAPSQFEAGFTS--LAHSSDDIQHTITAAEKVK 471 (476)
Q Consensus 423 ~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~~--~~~t~e~i~~~~~~l~~~~ 471 (476)
. .....+..+....|+-++......+.++ =.+|+++|+.+++.|....
T Consensus 399 ~-~~~~~l~~~~~~~G~~L~~~~~~~~~ia~tEt~t~~~i~~l~~~~~~~~ 448 (450)
T COG0403 399 E-EVAEALLAAAIAGGINLRRVDADTVLIALTETTTKEDIDALVAAFGGVN 448 (450)
T ss_pred h-hHHHHHHHHHHhcCCceeeecCCceEEEeecccCHHHHHHHHHHHhhhc
Confidence 1 3345666777778888877655555554 4668999999999887653
No 370
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=98.85 E-value=8.3e-07 Score=89.43 Aligned_cols=128 Identities=18% Similarity=0.214 Sum_probs=91.9
Q ss_pred HHHHHHHHhhCCCCC-eEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCC-CCCC-CCCC
Q 011856 142 NVLAEMVISAVPSIE-MVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLG-LPDS-PGVP 218 (476)
Q Consensus 142 ~~la~~l~~~~~~~e-~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~-~~~~-~~~~ 218 (476)
.+..+..++.+ +.+ ..+++||-|.||..++. +..++++.|.++...|-+....+.++|..+..+. ..+. .|+.
T Consensus 73 ~eAqe~aA~~f-gAd~tyFvvNGTS~ank~vi~---a~~~~GD~VLvdRN~HKSi~~glilaGa~Pvyl~p~~np~~gi~ 148 (557)
T COG1982 73 KEAQELAARVF-GADHTYFVVNGTSTANKAVIN---AVLTPGDKVLVDRNCHKSIHHGLILAGATPVYLEPSRNPLYGII 148 (557)
T ss_pred HHHHHHHHHHh-CCCceEEEECCccHHHHHHHH---hhcCCCCEEEecCCccHHHHHHHHHcCCceEEecCCCCcccccc
Confidence 34444444555 566 45567777888888888 6677788888889999988888888887443221 1111 1211
Q ss_pred CCCCCceeeccCCCHHHHHHHHhcCCCC-eEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccc
Q 011856 219 KGATYETLTAPFNDVSALENLFENNKGE-IAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM 289 (476)
Q Consensus 219 ~~~~~~~~~~~~~d~~~le~~l~~~~~~-~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~ 289 (476)
.. -+.+.+++.+.++++. ..+||++|.+ .|.+.. +++|.+++.++++++.+||+|
T Consensus 149 gg----------I~~~~~~~~l~~~~~~~k~~vitnpTY--dGv~~n----~~~i~~~~~~~~a~v~~deah 204 (557)
T COG1982 149 GG----------IPLETFKEALLAHPDAEKLAVITNPTY--DGVCYN----LRKIVELLHHYGAWVLYDEAH 204 (557)
T ss_pred CC----------CCHHHHHHHHHhChhhheeEEEecCcc--ceEeec----HHHHHHHHhhcCceEEhhhcC
Confidence 10 1688999888877666 7788888876 578888 999999999999999999999
No 371
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=98.80 E-value=4.9e-06 Score=86.55 Aligned_cols=231 Identities=14% Similarity=0.083 Sum_probs=133.9
Q ss_pred CCHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHHHhccC--------Cc-------------------------
Q 011856 137 PCLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTG--------RE------------------------- 182 (476)
Q Consensus 137 ~~~~~~~la~~l~~~~~-~~e~v~~~~sGseA~~~al~~ar~~~~--------~~------------------------- 182 (476)
....+.++.+++++.++ +...-.||+|||+||..+|.+||.... +.
T Consensus 121 ~t~lE~~vi~~la~l~G~~~~~G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~~~l~~~ 200 (608)
T TIGR03811 121 TSQMEEEVGKEFATLMGYKNGWGHIVADGSLANLEGLWYARNIKSLPFAMKEVKPELVAGKSDWELLNMPTKEIMDLLES 200 (608)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCeEEeCChHHHHHHHHHHHHHhhhccchhhhccccccccccchhhcccccccccccccc
Confidence 45788899999999986 334567999999999999999986420 00
Q ss_pred ----------------------eEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCC-----CHHH
Q 011856 183 ----------------------RIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFN-----DVSA 235 (476)
Q Consensus 183 ----------------------~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~ 235 (476)
.++.....-|-+..-++...|.+. ..++.+|.+ |+++
T Consensus 201 ~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~ilGlG~----------------~~vv~VpvD~~~rmd~~~ 264 (608)
T TIGR03811 201 AGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAADIIGIGL----------------DQVIPVPVDSNYRMDINE 264 (608)
T ss_pred cccchhhhhhhccccccccccceEEEECCCccHHHHHHHHHcCCCc----------------ccEEEeecCCCCcCCHHH
Confidence 022222233444443433333321 123333322 7999
Q ss_pred HHHHHhc---CCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHH---HHhCC--EEEEeccccCc-cc---c-c----c-
Q 011856 236 LENLFEN---NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRIT---KENGA--LLIFDEVMTGF-RL---A-Y----G- 297 (476)
Q Consensus 236 le~~l~~---~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~---~~~g~--llI~DEv~~g~-r~---g-~----~- 297 (476)
|++.|++ .+..+.+|+..--..+.|.+-| +++|.++| +++|+ +|++|-+|.|+ +. . . .
T Consensus 265 L~~~I~~~~~~g~p~~~VVataGTT~~GaiDp----l~eI~~l~~~~~~~gl~~~lHVDAAyGG~~~~l~~~~~~~~~p~ 340 (608)
T TIGR03811 265 LEKIIRKLAAEKTPILGVVGVVGSTEEGAVDG----IDKIVALRNKLMKEGIYFYLHVDAAYGGYGRAIFLDEDDNFIPY 340 (608)
T ss_pred HHHHHHHHHhcCCCeEEEEEEcCCcCCcccCC----HHHHHHHHHHHHHcCCceeEeeeccccchhhhhhcccccccccc
Confidence 9988863 2223445555544455888999 88888888 77898 69999999885 21 0 0 0
Q ss_pred ------------c-----------hhhccCC-CCchhh--hhhhcCCCCcEEEEEecH-HHHHhhcCCCCccc-------
Q 011856 298 ------------G-----------AQEYFGV-TPDLTT--LGKIIGGGLPVGAYGGRR-DIMEMVAPAGPMYQ------- 343 (476)
Q Consensus 298 ------------~-----------~~~~~g~-~pDi~t--~sK~lg~G~~iG~~~~~~-~i~~~l~~~~~~~~------- 343 (476)
| ....-++ ..|-+| .-|.+..-++.|+++.+. ++.+.+....++..
T Consensus 341 ~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK~g~~Py~~G~ll~Rd~~~~~~~~~~a~Yl~~~~~~~p 420 (608)
T TIGR03811 341 DDLQEVHAEYGVFTEKKEYISREVYNAYKAISEAESVTIDPHKMGYIPYSAGGIVIQDIRMRDVISYFATYVFEKGADIP 420 (608)
T ss_pred chhhcccccccccccccccccHhHHHHHhcCcCceEEEeCcccccccCCCeEEEEEeCHHHHHHHhcCcchhccccccCc
Confidence 0 0000122 234444 348776667899887764 44444432111110
Q ss_pred ----cCCCCCcHH--HHHHHHHHHHHh--cC---CCHHHHHHHHHHHHHHHHHHH
Q 011856 344 ----AGTLSGNPL--AMTAGIHTLKRL--KE---PGTYEYLNKITGELTQGIIDA 387 (476)
Q Consensus 344 ----~~t~~~~~~--~~aaa~aal~~~--~~---~~~~~~~~~~~~~l~~~L~~~ 387 (476)
..+..++.. .+++.-.+++.+ .. .++.++..+..+++.+.|++.
T Consensus 421 ~~~g~~~legSR~ga~AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~ 475 (608)
T TIGR03811 421 ALLGAYILEGSKAGATAASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNNL 475 (608)
T ss_pred ccccccceecCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 012223322 234444566655 22 567777778888888888774
No 372
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=98.76 E-value=7.5e-06 Score=79.98 Aligned_cols=309 Identities=13% Similarity=0.043 Sum_probs=167.5
Q ss_pred cHHHHHHHHHHHHh--cCC-------CCC--CCHHHHHHHHHHHhhCC--CCCeEEEeC-CHHHHHHHHHHHHHhcc-CC
Q 011856 117 DDQVLAALGETMKK--GTS-------FGA--PCLLENVLAEMVISAVP--SIEMVRFVN-SGTEACMGVLRLARAFT-GR 181 (476)
Q Consensus 117 ~p~v~~a~~~~l~~--~~~-------~~~--~~~~~~~la~~l~~~~~--~~e~v~~~~-sGseA~~~al~~ar~~~-~~ 181 (476)
+++|.+++.+.+.+ +.. +.. ..+...+..+.|.+++. ...+|+|.. |||.++++++. .+. ++
T Consensus 16 p~~Vl~~~~~~~~~~~~~g~si~eisHRs~~F~~i~~~~~~~Lr~Ll~~P~~y~Vlfl~GggT~~~ea~~~---Nll~~g 92 (364)
T PRK12462 16 PDTVLEQVRQAVVELPETGLSVLGMSHRSSWFSSLLAQAEADLRDLLGIPDEYGVVFLQGGSSLQFSMIPM---NFSRPG 92 (364)
T ss_pred CHHHHHHHHHHHhcccccCccccccccccHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeccHHHHHHHHHH---HcCCCC
Confidence 78888888877755 211 111 12445566666777664 223566554 58999999888 343 44
Q ss_pred ceEE-EEeCCCCCCchhHHhh-cCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCC
Q 011856 182 ERII-KFEGCYHGHADPFLVK-AGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNS 259 (476)
Q Consensus 182 ~~ii-~~~~~yhg~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~ 259 (476)
++++ +...+++|....-... .| .+...... ... +.-.+| +++.+ +. .++.+.|.+.++...+
T Consensus 93 ~~~~~~~~tG~fg~r~~~ea~~~g-~v~~~~~~--~~~------~~~~~p--~~~~~----~~-~~d~~~v~~t~NETst 156 (364)
T PRK12462 93 AAAPEYVTTGYWSRKAIGEASRVA-AMRVVWDG--AAS------GYRTLP--SLAEL----DW-DARAPFRHYVSNETVE 156 (364)
T ss_pred CcEEEEEeCCHHHHHHHHHHHhcC-CceEecCc--CCC------CCCcCC--CHHHh----cc-CCCCcEEEEccCCCCc
Confidence 4455 5566666543322221 12 22111000 000 000011 33433 22 1245667777777667
Q ss_pred CcccCCHHHHHHHHHHHHHhCCEEEEeccccCccccccchhhccCCCCchh--hhhhhcC-CCCcEEEEEecHHHHHhhc
Q 011856 260 GFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLT--TLGKIIG-GGLPVGAYGGRRDIMEMVA 336 (476)
Q Consensus 260 G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pDi~--t~sK~lg-~G~~iG~~~~~~~i~~~l~ 336 (476)
|+..+ ++.+.+++++|+|-+-+ + .+...-.+.+ |++ ..-|+|| +| ++.++.+++.++...
T Consensus 157 Gv~~~---------~~~~~~~~llvvD~sS~-~-~s~pid~~~~----dvi~agsQKnlgP~G--ltvvivs~~al~~~~ 219 (364)
T PRK12462 157 GLQFP---------DAAGLPDSPLIADMSSD-F-MSRPFDVEAY----GMVYAHAQKNLGPAG--VTVAIIRRALLERVP 219 (364)
T ss_pred eEecC---------cccccCCCeEEEEcCch-h-hCCCCChHHc----cEEEeeccccCCCCc--eEEEEECHHHHhhcc
Confidence 87765 23334799999996653 2 1112222333 665 3559998 34 677888999887765
Q ss_pred CCCCcc--------ccCCCC-CcHHHHHHHHHHHHHhcCC-----CHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeece
Q 011856 337 PAGPMY--------QAGTLS-GNPLAMTAGIHTLKRLKEP-----GTYEYLNKITGELTQGIIDAGKKAGHAICGGYISG 402 (476)
Q Consensus 337 ~~~~~~--------~~~t~~-~~~~~~aaa~aal~~~~~~-----~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~ 402 (476)
+.-+.+ ..++++ .+.....+...+|+.+.++ ...++.+++.+.+++.+.+...-+....+...+..
T Consensus 220 ~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~id~~~~~~~~~~~~~~RS~ 299 (364)
T PRK12462 220 DTLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATLDALNEVIDCHAHRAARST 299 (364)
T ss_pred ccCCchhhHHHHHhcCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcCc
Confidence 321111 123443 3455566667788877554 34445555555556555554211111111122222
Q ss_pred eEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCC--CcceEEe--CCCcHHHHHHHHHHHHHHHHH
Q 011856 403 MFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ--FEAGFTS--LAHSSDDIQHTITAAEKVKMR 473 (476)
Q Consensus 403 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~--~~~~~~~--~~~t~e~i~~~~~~l~~~~~~ 473 (476)
| -+.|. .++.+...+|.+.+.++|+.-..+. .+.+|.+ -+++.|+++.+++-+++.-++
T Consensus 300 m-nv~f~-----------~~~~~l~~~f~~~a~~~gl~~lkGhr~vgg~Ras~yna~~~e~v~~L~~fm~~f~~~ 362 (364)
T PRK12462 300 M-NVAFR-----------FRQPRLDTLFKEQSTEAGFCGLSGHRSIGGIRASLYNAVSEQAVSRLCAFLKDFAIR 362 (364)
T ss_pred c-eEEEE-----------cCCHHHHHHHHHHHHHCCCccccCCcccCceEEEcCCCCCHHHHHHHHHHHHHHHHh
Confidence 2 22222 1244556789999999999865442 2346765 467999999999998877543
No 373
>PRK05367 glycine dehydrogenase; Provisional
Probab=98.76 E-value=3.1e-06 Score=92.65 Aligned_cols=269 Identities=14% Similarity=0.140 Sum_probs=150.5
Q ss_pred HHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHHHhccC--CceEEEEeCCCCCCchhHHhh--cCCCCccCCCCCCC
Q 011856 141 ENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTG--RERIIKFEGCYHGHADPFLVK--AGSGVATLGLPDSP 215 (476)
Q Consensus 141 ~~~la~~l~~~~~-~~e~v~~~~sGseA~~~al~~ar~~~~--~~~ii~~~~~yhg~~~~~~~~--~g~~~~~~~~~~~~ 215 (476)
..++.+.++++++ +..++-+..++|.+.++++... .+.+ +++|++.+..| ..+...+.. ...+
T Consensus 123 l~~~Qt~la~LtG~~~anaSl~d~aTAa~ea~~~a~-~~~~~~~~~vlv~~~~h-P~~~~v~~t~a~~~G---------- 190 (954)
T PRK05367 123 LLNFQTMVADLTGLEIANASLLDEATAAAEAMALAK-RVSKSKSNRFFVDDDVH-PQTLDVLRTRAEPLG---------- 190 (954)
T ss_pred HHHHHHHHHHHHCCChhhccccccHHHHHHHHHHhh-hhccCCCCEEEEcCccC-HHHHHHHHHHHHhCC----------
Confidence 3466677888875 4568889999999999766533 3433 36676666555 433333221 1111
Q ss_pred CCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccc---cCc
Q 011856 216 GVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM---TGF 292 (476)
Q Consensus 216 ~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~---~g~ 292 (476)
+ +++.++.++ +++ .++++++++ .+.+..|.+.+ +++|.++|+++|+++++|-.+ +.+
T Consensus 191 -~------ev~~~~~~~--d~~------~~~~~~vlv-q~p~~~G~i~d----~~~i~~~ah~~Gal~~vda~~~Al~~l 250 (954)
T PRK05367 191 -I------EVVVGDAAK--ALD------HDDVFGVLL-QYPGTSGEVRD----YTALIAAAHARGALVAVAADLLALTLL 250 (954)
T ss_pred -C------EEEEecCcc--CCC------cccEEEEEE-ecCCCCeeecc----HHHHHHHHHHcCCEEEEEehhhhccCC
Confidence 1 233444322 111 125655543 34466889988 999999999999999999855 222
Q ss_pred -cccccchhhccCCCCchhhh--hhh---cC-CCCcEEEEEecHHHHHhhcCC---------C-Ccc-------------
Q 011856 293 -RLAYGGAQEYFGVTPDLTTL--GKI---IG-GGLPVGAYGGRRDIMEMVAPA---------G-PMY------------- 342 (476)
Q Consensus 293 -r~g~~~~~~~~g~~pDi~t~--sK~---lg-~G~~iG~~~~~~~i~~~l~~~---------~-~~~------------- 342 (476)
..+ .+| .|+++. -|- +| ||--.|++.+++++.+.+... + +.+
T Consensus 251 ~~pg------e~G--aDi~vgs~qkfg~P~g~GGP~aGflavr~~~~r~lpgrivG~s~d~~g~~~~~lalqtReqhiRr 322 (954)
T PRK05367 251 TPPG------EMG--ADIAVGSAQRFGVPMGFGGPHAAYFAVRDAYKRSMPGRIVGVSVDAAGNPALRLALQTREQHIRR 322 (954)
T ss_pred CChh------hcC--CCEEEeeCcccCCCCCCCCCCEEEEEECHHHHhhCCCCeeeeecccCCCcccccccccccccccc
Confidence 222 222 366532 242 23 333488889999887776421 0 000
Q ss_pred ccCCCCCc-HHHHHHHHHH--HHHhcC---CCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCc
Q 011856 343 QAGTLSGN-PLAMTAGIHT--LKRLKE---PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNF 416 (476)
Q Consensus 343 ~~~t~~~~-~~~~aaa~aa--l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~ 416 (476)
..+|.+.. ..+..+..+. +..+.. +++.+++..+..++.++|.+.+.+ +... .....+.+.+
T Consensus 323 ekaTsNict~qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~~G~~--~~~~--~~f~~~~~~~-------- 390 (954)
T PRK05367 323 EKATSNICTAQVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRALGLE--VVHD--SFFDTLTVEV-------- 390 (954)
T ss_pred cccccccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcCcc--cCCC--CCCCeEEEeC--------
Confidence 01121111 1111222222 232332 455677777888888888663222 1111 1011111221
Q ss_pred hhhcccchHHHHHHHHHHHHCCeEeccCCCcceEE--eCCCcHHHHHHHHHHHH
Q 011856 417 EDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAE 468 (476)
Q Consensus 417 ~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~--~~~~t~e~i~~~~~~l~ 468 (476)
+ ....++.+.|+++||.+.......+++ .-..|++|||.+++.|.
T Consensus 391 -----~--~~~~~i~~~l~~~gi~~~~~~~~~l~is~~e~~t~~did~l~~~l~ 437 (954)
T PRK05367 391 -----G--GDAAAVLARALAAGINLRRVDDDHVGISLDETTTREDLAALLAVFG 437 (954)
T ss_pred -----C--CCHHHHHHHHHHCCceeccccCCEEEEEecccCCHHHHHHHHHHHc
Confidence 0 013678899999999986554445666 46779999999999996
No 374
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=98.60 E-value=3.8e-05 Score=72.94 Aligned_cols=201 Identities=22% Similarity=0.265 Sum_probs=113.3
Q ss_pred CcHHHHHHHHHH-HHh-----cCCCCCCCHHHHHHHHHHHhhCCCCCeEEEe---CCHHHHHHHHHHHHHhccCCceEEE
Q 011856 116 ADDQVLAALGET-MKK-----GTSFGAPCLLENVLAEMVISAVPSIEMVRFV---NSGTEACMGVLRLARAFTGRERIIK 186 (476)
Q Consensus 116 ~~p~v~~a~~~~-l~~-----~~~~~~~~~~~~~la~~l~~~~~~~e~v~~~---~sGseA~~~al~~ar~~~~~~~ii~ 186 (476)
|..+|.+|+++. +.. -+.|||.+..++.|.+-+++.+ +.|..++= .|||.|+..+|.- .+.+++.++.
T Consensus 25 Nq~KVL~Af~~~~vs~~hf~~tTGYGY~D~GRd~le~iyA~vf-gaE~ALVRpq~vSGTHAi~~~Lfg--~LrpGD~ll~ 101 (403)
T PF06838_consen 25 NQLKVLKAFQENRVSDSHFAGTTGYGYDDIGRDKLERIYADVF-GAEDALVRPQFVSGTHAIALALFG--VLRPGDELLS 101 (403)
T ss_dssp HHHHHHHHHHHTT--GGGCS---TT-TT-HHHHHHHHHHHHHC-T-SEEEEETTS-SHHHHHHHHHHH--H--TT-EEEE
T ss_pred HHHHHHHHHHHcCCChhhcCCCCcCCCCCccHHHHHHHHHHHh-CchhhhhcccccchHHHHHHHHHh--cCCCCCeEEE
Confidence 456777777653 211 1457778888999999999999 67777764 4899999999984 3446667776
Q ss_pred EeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCC-----CHHHHHHHHhcCCCCeEEEEEcccCCCCCc
Q 011856 187 FEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFN-----DVSALENLFENNKGEIAAIILEPVVGNSGF 261 (476)
Q Consensus 187 ~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~~~le~~l~~~~~~~a~vi~ep~~~~~G~ 261 (476)
..+.=.-.....+-..+. ..|.....+.....++.. |.+.+++.++. ++++|.+--.-+-.-.
T Consensus 102 ~tG~PYDTL~~VIG~~g~---------~~GSL~e~Gi~Y~~v~L~~dg~~D~~~i~~~~~~---~tk~v~IQRSrGYs~R 169 (403)
T PF06838_consen 102 ITGKPYDTLEEVIGIRGN---------GPGSLKEFGIKYREVPLTEDGTIDWEAIKKALKP---NTKMVLIQRSRGYSWR 169 (403)
T ss_dssp SSSS--CCHHHHHTSSSS---------SSSSTGGGT-EEEE--B-TTSSB-HHHHHHHHHT---TEEEEEEE-S-TTSSS
T ss_pred cCCCchhhHHHHhCCCCC---------CCCChHHhCceeEEEeecCCCCcCHHHHHHhhcc---CceEEEEecCCCCCCC
Confidence 655322222222222222 111111111122222221 79999999983 6888888654433222
Q ss_pred ccCCHHHHHHHHHHHHHh--CCEEEEeccccCc-cccccchhhccCCCCchh--hhhhhcCCCC-c-EEEEEecHHHHHh
Q 011856 262 IAPKPDFLNAIRRITKEN--GALLIFDEVMTGF-RLAYGGAQEYFGVTPDLT--TLGKIIGGGL-P-VGAYGGRRDIMEM 334 (476)
Q Consensus 262 i~~~~~~l~~l~~l~~~~--g~llI~DEv~~g~-r~g~~~~~~~~g~~pDi~--t~sK~lg~G~-~-iG~~~~~~~i~~~ 334 (476)
-..+-+.++++.++.++. ++++++|..|..| -.- |...+-.|++ +|=|-.|||+ | .||+++++++++.
T Consensus 170 ~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEFvE~~-----EP~~vGADl~aGSLIKNpGGgiAptGGYIaGr~~lVe~ 244 (403)
T PF06838_consen 170 PSLTIEEIKEIIKFVKEINPDVIIFVDNCYGEFVETQ-----EPTEVGADLMAGSLIKNPGGGIAPTGGYIAGRKDLVER 244 (403)
T ss_dssp ----HHHHHHHHHHHHHH-TTSEEEEE-TTTTTTSSS------GGGGT-SEEEEETTSGGGTTT-SS-EEEEESHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhhCCCeEEEEeCCcceecccc-----CccccchhheeccceeCCCCCccCcCCEEechHHHHHH
Confidence 222333356666666654 7899999999887 322 3334456877 6889999996 5 6677999999987
Q ss_pred hc
Q 011856 335 VA 336 (476)
Q Consensus 335 l~ 336 (476)
..
T Consensus 245 ~a 246 (403)
T PF06838_consen 245 AA 246 (403)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 375
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=98.56 E-value=5.4e-06 Score=81.96 Aligned_cols=275 Identities=16% Similarity=0.224 Sum_probs=130.6
Q ss_pred HHHHHHHHHHhhCCCCCeE--EEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCC
Q 011856 140 LENVLAEMVISAVPSIEMV--RFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGV 217 (476)
Q Consensus 140 ~~~~la~~l~~~~~~~e~v--~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~ 217 (476)
...++-..+++++ +.|-+ -+..+++.+-++++...|...++++.++...+-|..+...+...... .+
T Consensus 111 ~lfe~Qs~i~eLT-GmdvaNaSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~t~a~~---------~g- 179 (429)
T PF02347_consen 111 ALFEYQSMICELT-GMDVANASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVLRTYAAP---------LG- 179 (429)
T ss_dssp HHHHHHHHHHHHH-TSSEE-SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHHHHHCCH---------CC-
T ss_pred HHHHHHHHHHHhh-CCCccCCCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHHHHhhhh---------CC-
Confidence 3457778888887 56543 45566776666655444444343345555667777666554432210 01
Q ss_pred CCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccc----cCc-
Q 011856 218 PKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM----TGF- 292 (476)
Q Consensus 218 ~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~----~g~- 292 (476)
.+++.++.++-.... .+++++|++..++ .-|.+.. +++|.++++++|+++|+ -+- .++
T Consensus 180 -----~~iv~~~~~~~~~~d------~~~~a~v~vq~Pn-~~G~~ed----~~~i~~~~h~~gal~~~-~ad~~aL~~l~ 242 (429)
T PF02347_consen 180 -----IEIVEVPLDEDGTTD------DDDTAAVMVQNPN-TFGVFED----IKEIADIAHAAGALVIV-GADPNALGGLK 242 (429)
T ss_dssp -----EEEEEE-BBTTCSB-------STTEEEEEEESS--TTSB--T----HHHHHHHHHHTT-EEEE-CGGCCGCCTC-
T ss_pred -----eEEEEecccccCCcc------ccCeEEEEeecCC-CCceEee----HHHHHHHHHHcCCEEEE-ecCHHHHhCcC
Confidence 124444432210000 3578888886554 3577776 99999999999999886 322 222
Q ss_pred cccccchhhccCCCCchhh-hhhhc----C-CCCcEEEEEecHHHHHhhcC----------CCCcc--------------
Q 011856 293 RLAYGGAQEYFGVTPDLTT-LGKII----G-GGLPVGAYGGRRDIMEMVAP----------AGPMY-------------- 342 (476)
Q Consensus 293 r~g~~~~~~~~g~~pDi~t-~sK~l----g-~G~~iG~~~~~~~i~~~l~~----------~~~~~-------------- 342 (476)
++|. +| .||++ .+|.| + ||--.|++.++++++..+-- ..+.+
T Consensus 243 ~Pge------~G--ADI~vg~~Q~fg~p~~~GGP~~G~~a~~~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrRe 314 (429)
T PF02347_consen 243 SPGE------YG--ADIVVGEHQTFGIPMGFGGPGAGFFAVREDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRRE 314 (429)
T ss_dssp -GGG------GT---SEEEECCTTTT---CCC-S--EEEEE-GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGC
T ss_pred Chhh------cC--ccEEeeCCCCCcccCCCCCCCeeeEEEhhhhhhhCCCceecccccccccceeeecccccccccccc
Confidence 3333 23 36652 34544 4 34458888889887766521 11110
Q ss_pred -ccCCCCCcHHHHH-HHHHHHHHhcC---CCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCch
Q 011856 343 -QAGTLSGNPLAMT-AGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFE 417 (476)
Q Consensus 343 -~~~t~~~~~~~~a-aa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~ 417 (476)
-.+..+.|...++ ++...+..+.. .++-++...+..|+.++|.+. ...++. + ..|+-+.+..
T Consensus 315 KAtSNIctnqaL~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~-~~~~~~----~-~~f~e~v~~~------- 381 (429)
T PF02347_consen 315 KATSNICTNQALLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKI-YGLPFD----N-PFFFEFVVVF------- 381 (429)
T ss_dssp CSTT---SS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCT-TBECSS----S-SSBSSEEEEE-------
T ss_pred chhhhhhhhHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHh-cCcccC----C-CCceeeeeec-------
Confidence 1233444544433 22222333322 456677778888888888775 222211 1 1111111111
Q ss_pred hhcccchHHHHHHHHHHHHCCeEeccCCCcceEEe--CCCcHHHHHHHHHHH
Q 011856 418 DAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFTS--LAHSSDDIQHTITAA 467 (476)
Q Consensus 418 ~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~~--~~~t~e~i~~~~~~l 467 (476)
..+ ....++.+.+...|+.........+.++ =.+|++|||.++++|
T Consensus 382 ---~~~-~~~~~l~~~~~~~gl~~~~~~~~~~li~~TE~~t~edid~lv~~f 429 (429)
T PF02347_consen 382 ---SKD-KEVEELLKRGIEGGLNLRYPDDGALLICVTETRTKEDIDRLVEAF 429 (429)
T ss_dssp ---SS--HHHHHHHHTT----EEEGGG-SSEEEEE--TT--HHHHHHHHH--
T ss_pred ---CCc-HHHHHHHHHHHhcCCCccccCCCeEEEEccCCCCHHHHHHHHhcC
Confidence 111 2333466666666766554444444443 467899999999875
No 376
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=98.53 E-value=1.2e-07 Score=90.62 Aligned_cols=223 Identities=19% Similarity=0.270 Sum_probs=53.9
Q ss_pred ccCCCC--cHHHHHHHHHHHHhcCCCCC------CCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCc
Q 011856 111 AIIGHA--DDQVLAALGETMKKGTSFGA------PCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRE 182 (476)
Q Consensus 111 ~~lG~~--~p~v~~a~~~~l~~~~~~~~------~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~ 182 (476)
.+||-+ ++++.+++.+.+......-+ -..-...+.+.++..+ +.|..+++|+...|+..++. .+..++
T Consensus 11 TnLGRs~l~~~a~~a~~~~a~~Y~nLE~dl~~G~Rg~R~~~v~~ll~~lt-gAeaA~VvNnnaAAv~L~l~---~la~~~ 86 (367)
T PF03841_consen 11 TNLGRSPLSEEAIEAVAEVASGYSNLEYDLETGKRGSRYAHVEELLCELT-GAEAALVVNNNAAAVLLALN---TLAKGK 86 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccc-cccccccccccccccccccc---cccccc
Confidence 356763 67888888776654221111 0111233445555555 88999999999999988887 444455
Q ss_pred eEEEEeCC---CCCC--chhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccC---CCHHHHHHHHhcCCCCeEEEE-Ec
Q 011856 183 RIIKFEGC---YHGH--ADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPF---NDVSALENLFENNKGEIAAII-LE 253 (476)
Q Consensus 183 ~ii~~~~~---yhg~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~d~~~le~~l~~~~~~~a~vi-~e 253 (476)
+||+..+- +-|. ....+..+|... +.+-. ..+++.+++|.+ ++++++ +-
T Consensus 87 EvIvsRGelVeiGgsFRip~vm~~sGa~l-------------------vEVGttN~t~~~Dye~AI~e---~Ta~ll~Vh 144 (367)
T PF03841_consen 87 EVIVSRGELVEIGGSFRIPDVMRQSGARL-------------------VEVGTTNRTHLSDYEKAITE---NTAALLKVH 144 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccccccccccccccccccc-------------------cccccccccccccccccccc---ccccccccc
Confidence 56654332 1111 112222222211 11111 136778888874 566654 33
Q ss_pred c-cCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cc---c---ccchhhccCCCCchhhhh--hhcCCCCcEE
Q 011856 254 P-VVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RL---A---YGGAQEYFGVTPDLTTLG--KIIGGGLPVG 323 (476)
Q Consensus 254 p-~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~---g---~~~~~~~~g~~pDi~t~s--K~lg~G~~iG 323 (476)
+ ++...|....+ . ++++.+++++|++++|+|-.-..+ .. | ..-..+....-.|++||| |.+|| -..|
T Consensus 145 ~Sn~~i~GFt~~~-~-~~el~~la~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~~~GaDlV~fSGdKlLGG-PQaG 221 (367)
T PF03841_consen 145 TSNFRIQGFTGEV-S-LEELAELAKEHGLPVIVDLGSGLLVDLSPYGLPDEPTVQEYLAAGADLVTFSGDKLLGG-PQAG 221 (367)
T ss_dssp ------------------HHHHHHHHHT--EEEE-TTHHHHHHHTT----------CCCCT-SEEEEETTSSSSS--S-E
T ss_pred ccccccccccccc-c-HHHHHHHHhhcCCcEEEECCCCCCcCcccccCccccHHHHHhhcCCCEEEEECCCcCCC-CCeE
Confidence 2 33333333222 1 899999999999999999655222 11 1 111223344457999998 88875 3478
Q ss_pred EEEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhc
Q 011856 324 AYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLK 365 (476)
Q Consensus 324 ~~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~ 365 (476)
.++|++++++.+++. -..-.+-.+-+..++..++|+.+.
T Consensus 222 iI~Gkk~lI~~lk~~---pl~RalrvdK~tla~L~atL~~Y~ 260 (367)
T PF03841_consen 222 IIVGKKELIEKLKKH---PLGRALRVDKLTLAALEATLRLYL 260 (367)
T ss_dssp EEEEEHHHHHHHHHH---HHTTT-B--HHHHHHHHHHHHH--
T ss_pred EEEeCHHHHHHHhhC---CCcceEeeCHHHHHHHHHHHHHHH
Confidence 889999999998731 122234557788888888888654
No 377
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=98.44 E-value=4.9e-05 Score=76.47 Aligned_cols=304 Identities=17% Similarity=0.227 Sum_probs=178.9
Q ss_pred HHHHHHHHHHHhhCCCCCeEEE-eCCHHHHHHHHHHHHHhcc-----CCceEEEEeCCCCCCchhHHhhcCCCCccCCCC
Q 011856 139 LLENVLAEMVISAVPSIEMVRF-VNSGTEACMGVLRLARAFT-----GRERIIKFEGCYHGHADPFLVKAGSGVATLGLP 212 (476)
Q Consensus 139 ~~~~~la~~l~~~~~~~e~v~~-~~sGseA~~~al~~ar~~~-----~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~ 212 (476)
++-.+|.+.|++.. +.|.+.| -|||.++-.+-++..|+|. +.+.|....-+-||.........|..+......
T Consensus 582 ~lf~~Le~~Lc~iT-G~D~~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNPASA~MagmkvvpV~~~ 660 (1001)
T KOG2040|consen 582 QLFTELEKDLCEIT-GFDSFSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNPASAAMAGMKVVPVGCD 660 (1001)
T ss_pred HHHHHHHHHhheee-cccceeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCChhhHHhcCCEEEEeecc
Confidence 44457788888877 7787766 5788888888888777772 456777778899998877777777766543322
Q ss_pred CCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEecc----
Q 011856 213 DSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEV---- 288 (476)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv---- 288 (476)
....+ |+.+|++.-+++.++.+++.+.-. ++-|...+ + +++++++.++||--+..|-+
T Consensus 661 ~~G~i--------------d~~dLk~kaekh~~~Laa~MvTYP-ST~GvfE~--~-i~d~cd~iHehGGQVYlDGANMNA 722 (1001)
T KOG2040|consen 661 ANGNI--------------DMVDLKAKAEKHKDNLAALMVTYP-STHGVFEE--G-IDDICDIIHEHGGQVYLDGANMNA 722 (1001)
T ss_pred CCCCc--------------cHHHHHHHHHHhhhhhheeEEecc-cccccccc--c-HHHHHHHHHhcCCEEEecCCCccc
Confidence 22222 899999999888888888776543 33454433 3 89999999999999999965
Q ss_pred ccCc-cccccch-hhccCCCCchhhhhhhcCC-CCcEEEEEecHHHHHhhcCCCCcc---------ccCCCC----CcHH
Q 011856 289 MTGF-RLAYGGA-QEYFGVTPDLTTLGKIIGG-GLPVGAYGGRRDIMEMVAPAGPMY---------QAGTLS----GNPL 352 (476)
Q Consensus 289 ~~g~-r~g~~~~-~~~~g~~pDi~t~sK~lg~-G~~iG~~~~~~~i~~~l~~~~~~~---------~~~t~~----~~~~ 352 (476)
|.|+ |.|..++ ..|+++. -||.=--|| |-.+|-+.+++.+...+- ..+.. -.++.+ ++..
T Consensus 723 qVGlc~pGd~GaDV~HLNLH---KTFcIPHGGGGPg~gPIgVK~HLapfLP-~HpVvs~~~~~~~~~~gsVsaaP~Gsa~ 798 (1001)
T KOG2040|consen 723 QVGLCRPGDIGADVCHLNLH---KTFCIPHGGGGPGMGPIGVKKHLAPFLP-SHPVVSPGRPEDTSPVGSVSAAPWGSAL 798 (1001)
T ss_pred eecccCCccccccceeeccc---ceeeecCCCCCCCCCccchhhhccccCC-CCCccCCCCCCCCCCccceeccCCCcce
Confidence 4677 7665432 1122211 022222343 344666666666655442 11111 011222 2333
Q ss_pred HHHHHHHHHHHhcCCCH---HHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHH
Q 011856 353 AMTAGIHTLKRLKEPGT---YEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFAR 429 (476)
Q Consensus 353 ~~aaa~aal~~~~~~~~---~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 429 (476)
......+.++.+....+ -+-.--+..|+.++|+.. +.+. .++.-..+.-+|-- +.++.+.....++..
T Consensus 799 ILpISwaYikmMG~~GL~~as~~AiLNaNYMakRLe~h---Ykil--~~~~~~~vaHEFIl----D~r~fK~~agieavD 869 (1001)
T KOG2040|consen 799 ILPISWAYIKMMGSGGLKDASKIAILNANYMAKRLESH---YKIL--FRGENGLVAHEFIL----DLRPFKKTAGIEAVD 869 (1001)
T ss_pred eehhHHHHHHHhcccccchhhHHHhhhhHHHHHHHhhc---ccee--EecCCcceeeeeee----echhhccccCCcHHH
Confidence 33444566666654333 333445677888888764 3322 12222244444421 111222222234567
Q ss_pred HHHHHHHCCeEeccCCCc---ceEE-e-CCCcHHHHHHHHHHHHHHHHHh
Q 011856 430 FYRGMLEEGVYFAPSQFE---AGFT-S-LAHSSDDIQHTITAAEKVKMRF 474 (476)
Q Consensus 430 ~~~~l~~~Gv~~~~~~~~---~~~~-~-~~~t~e~i~~~~~~l~~~~~~~ 474 (476)
+++.|.+-|+..-....+ .+.+ + -.-+.+++|++++++-.+-+++
T Consensus 870 vAKRL~DYgFHaPTmswPV~gtLMIEPTESE~k~ElDRfcdAliSIreEI 919 (1001)
T KOG2040|consen 870 VAKRLMDYGFHAPTMSWPVAGTLMIEPTESEDKAELDRFCDALISIREEI 919 (1001)
T ss_pred HHHHHHhccCCCCccccccCCceEeccCccccHHHHHHHHHHHHHHHHHH
Confidence 889999999875443322 2333 2 2336689999999987665443
No 378
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=98.43 E-value=1.8e-05 Score=75.98 Aligned_cols=305 Identities=14% Similarity=0.133 Sum_probs=156.5
Q ss_pred HHHHHHHHhhCCC-C-CeEEEeCCHHHHHHHHHHHHHhc--cC--------CceEEEE-eCCCCCCchhHHhhcCCCCcc
Q 011856 142 NVLAEMVISAVPS-I-EMVRFVNSGTEACMGVLRLARAF--TG--------RERIIKF-EGCYHGHADPFLVKAGSGVAT 208 (476)
Q Consensus 142 ~~la~~l~~~~~~-~-e~v~~~~sGseA~~~al~~ar~~--~~--------~~~ii~~-~~~yhg~~~~~~~~~g~~~~~ 208 (476)
.++-.++.+..+. . .+-+|++||+-+|+.++..||.- .+ =...|.| ..--|=+...+....|.+.
T Consensus 144 ~~vl~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~kaAa~lg~gt-- 221 (510)
T KOG0629|consen 144 EEVLAKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIKKAAAFLGLGT-- 221 (510)
T ss_pred HHHHHHHHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHHHHHHHhccCC--
Confidence 4444455555542 2 37789999999999999998742 11 1234444 3334444433333333221
Q ss_pred CCCCCCCCCCCCCCCceeeccCC-----CHHHHHHHHhcCCCC--eEEEEEcccCCC--CCcccCCHHHHHHHHHHHHHh
Q 011856 209 LGLPDSPGVPKGATYETLTAPFN-----DVSALENLFENNKGE--IAAIILEPVVGN--SGFIAPKPDFLNAIRRITKEN 279 (476)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~-----d~~~le~~l~~~~~~--~a~vi~ep~~~~--~G~i~~~~~~l~~l~~l~~~~ 279 (476)
.+++.++-+ ++++||+.|.+...+ +.. +++..-++ -|...| |+.|.++|++|
T Consensus 222 --------------d~c~~v~t~e~Gkm~~~dLe~kile~k~kg~~Pf-~vnaTaGTTV~GAFDd----L~~iadiC~k~ 282 (510)
T KOG0629|consen 222 --------------DHCIKVKTDERGKMIPDDLEKKILEAKAKGGVPF-FVNATAGTTVLGAFDD----LNGIADICEKH 282 (510)
T ss_pred --------------ceeEEecccccCccchHHHHHHHHHHHhcCCCCe-EEEecCCceeeeccCc----HHHHHHHHHhc
Confidence 123333332 589999888643222 223 33333332 566777 99999999999
Q ss_pred CCEEEEeccccC-c-cccccchhhccCCC-Cchhhh--hhhcCCCCcEEEEEecHH-HHHhhcC--------CCCccccC
Q 011856 280 GALLIFDEVMTG-F-RLAYGGAQEYFGVT-PDLTTL--GKIIGGGLPVGAYGGRRD-IMEMVAP--------AGPMYQAG 345 (476)
Q Consensus 280 g~llI~DEv~~g-~-r~g~~~~~~~~g~~-pDi~t~--sK~lg~G~~iG~~~~~~~-i~~~l~~--------~~~~~~~~ 345 (476)
++++.+|-+..| + -.-.. -+...|+. .|-++. -|-+|..++.++.+.+.+ +++.-.+ ..+.+..+
T Consensus 283 ~lWmHvDAAwGGglLmS~k~-R~kl~Giera~SvtwnpHK~~gaplqCsa~l~r~~gll~~Cn~~~A~YLFq~dK~YdvS 361 (510)
T KOG0629|consen 283 KLWMHVDAAWGGGLLMSRKH-RHKLTGIERANSVTWNPHKLMGAPLQCSAFLTREEGLLQRCNQMSAIYLFQQDKFYDVS 361 (510)
T ss_pred CEEEEeecccccccccChhh-HhhccCccccCceeecHHHhhcCcchhhHHHHHHHHHHHhhcccchhhhhccCceeecc
Confidence 999999999965 3 11111 11223443 355554 488988889998887765 3333221 11111111
Q ss_pred CCCCcHHHHHHHH------HH--HHHhcC---CCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEec--CC
Q 011856 346 TLSGNPLAMTAGI------HT--LKRLKE---PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTE--GP 412 (476)
Q Consensus 346 t~~~~~~~~aaa~------aa--l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~--~~ 412 (476)
--.++- +..-+. -. ++.-.. +..++++-++.+||.++|++..... ...+ ...-..-+.|.. +.
T Consensus 362 ~DTgdK-~iQCGRh~D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~-~l~~--~~pe~~nv~fw~vp~~ 437 (510)
T KOG0629|consen 362 YDTGDK-AIQCGRHVDVFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFE-MLFE--LEPEHVNVCFWYVPPS 437 (510)
T ss_pred cccccc-hhhcCccccHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhcccce-ehhc--CCCceEEEeeccCchH
Confidence 101111 111110 01 111111 4556777888999999998753211 1111 111122222211 11
Q ss_pred CcCchhhcccch---HHHHHHHHHHHHCCeEe---ccCCC--cceEE---eCCCcHHHHHHHHHHHHHHHH
Q 011856 413 VYNFEDAKKSET---TKFARFYRGMLEEGVYF---APSQF--EAGFT---SLAHSSDDIQHTITAAEKVKM 472 (476)
Q Consensus 413 ~~~~~~~~~~~~---~~~~~~~~~l~~~Gv~~---~~~~~--~~~~~---~~~~t~e~i~~~~~~l~~~~~ 472 (476)
.+........+. ..+-.+-..|.++|... .|.+. +.+|+ +.+.+++|+|.+++.|++.-+
T Consensus 438 lR~~~~~~e~~~rL~kVaPkIK~~Mm~~Gt~Mi~YqPl~~~~nffr~v~sn~a~~~ad~dflldEIerlgq 508 (510)
T KOG0629|consen 438 LRGWQENPERDSRLVKVAPKIKERMMKKGTTMIGYQPLGDKPNFFRMVISNPALTEADLDFLLDEIERLGQ 508 (510)
T ss_pred hccCcccchhhhHHHhhCcHHHHHHHhccceeeEecccccccchhheecccchhhhhhHHHHHHHHHHhcc
Confidence 111111000000 11223456778888543 23321 22333 467799999999999887643
No 379
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=98.42 E-value=0.00018 Score=78.02 Aligned_cols=272 Identities=10% Similarity=0.103 Sum_probs=146.1
Q ss_pred HHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHHHhccC-CceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCC
Q 011856 141 ENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTG-RERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVP 218 (476)
Q Consensus 141 ~~~la~~l~~~~~-~~e~v~~~~sGseA~~~al~~ar~~~~-~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~ 218 (476)
..++-..++++++ +..++-+..+++.+.++++...|.-.+ +++|++. ..-|..+...+..... ..|+
T Consensus 111 l~e~Qt~i~eLtGm~~aNaSl~d~atA~aEa~~~a~~~~~~~~~~vlv~-~~~hP~~~~v~~t~a~---------~~g~- 179 (939)
T TIGR00461 111 LLNFQTVVSDLTGLPVANASLLDEGTAAAEAMALSFNVSKKKANKFFVA-KDLHPQTKSVLHTRAK---------PFGI- 179 (939)
T ss_pred HHHHHHHHHHHHCCChhhhhccchhhHHHHHHHHHHHhhcCCCCEEEEC-CCCCcchHHHHHHHHH---------hcCc-
Confidence 3467777888874 333667778888887765553322222 3555554 4555554433321110 0111
Q ss_pred CCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEE-cccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEecccc---Cc-c
Q 011856 219 KGATYETLTAPFNDVSALENLFENNKGEIAAIIL-EPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMT---GF-R 293 (476)
Q Consensus 219 ~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~-ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~---g~-r 293 (476)
+++.+ |+++|++.+ +++++++ .| +..|.+.. +++|.++++++|++++++--.. .+ +
T Consensus 180 -----~v~~~---~~~~l~~~~-----~~~~v~~q~P--n~~G~ied----~~~i~~~~h~~gal~~~~ad~~al~ll~~ 240 (939)
T TIGR00461 180 -----EVIVV---DCSDIKKAV-----DVFGCLLQYP--ATDGSILD----YKQLIDALHSHKSLVSVAADLMALTLLTP 240 (939)
T ss_pred -----EEEEE---cHHHHhhcC-----CEEEEEEECC--CCCeEEec----HHHHHHHHHHcCCEEEEEechHHhCCcCC
Confidence 23333 455555444 3565555 44 34677776 9999999999999999865442 22 3
Q ss_pred ccccchhhccCCCCchhh-hhhhc----C-CCCcEEEEEecHHHHHhhcCC----------CCccc--------------
Q 011856 294 LAYGGAQEYFGVTPDLTT-LGKII----G-GGLPVGAYGGRRDIMEMVAPA----------GPMYQ-------------- 343 (476)
Q Consensus 294 ~g~~~~~~~~g~~pDi~t-~sK~l----g-~G~~iG~~~~~~~i~~~l~~~----------~~~~~-------------- 343 (476)
.|.++ .||++ .+|.| + ||--.|++.+++++.+.+-.. .+.+.
T Consensus 241 Pge~G--------aDi~vg~~q~fg~p~g~GGP~aG~~a~~~~l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrRek 312 (939)
T TIGR00461 241 PGHYG--------ADIVLGSSQRFGVPMGYGGPHAAFFAVKDEYNRKMPGRIVGVSKDALGNTALRLALQTREQHIRRDK 312 (939)
T ss_pred HHHcC--------CcEEeeCCCccCCCCCCCCCceeeeeecHhhHhhCCCCceeEEecCCCCccceeecccccccccccc
Confidence 33332 36652 33444 3 344488888888877665310 00000
Q ss_pred -cCCCCCcHHHHH-HHHHHHHHhcC---CCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchh
Q 011856 344 -AGTLSGNPLAMT-AGIHTLKRLKE---PGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFED 418 (476)
Q Consensus 344 -~~t~~~~~~~~a-aa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~ 418 (476)
.+..+.+...++ .+...+..+.. .++-+++..+..++.++|.+.+.+. .. ...|--+.+..+
T Consensus 313 AtSNICt~qaL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~~G~~~--~~----~~fF~~~~v~~~------- 379 (939)
T TIGR00461 313 ATSNICTAQVLLANVASSYCVYHGPKGLKNIARRIHSLTSILANGLENDPHEL--IN----KTWFDTLTVKVG------- 379 (939)
T ss_pred cCcchhHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhCCCcc--cC----CCccceEEEEeC-------
Confidence 111122222222 11111233332 2345566677778888887743221 11 111111222110
Q ss_pred hcccchHHHHHHHHHHHHCCeEeccCCCcceEE--eCCCcHHHHHHHHHHHH
Q 011856 419 AKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT--SLAHSSDDIQHTITAAE 468 (476)
Q Consensus 419 ~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~--~~~~t~e~i~~~~~~l~ 468 (476)
.....++.+.++++||.++....+.+.+ .-.+|++||+.+++.|.
T Consensus 380 -----~~~~~~i~~~~~~~gi~l~~~~~~~i~~s~~E~~t~~di~~l~~~~~ 426 (939)
T TIGR00461 380 -----NGISSELLKAAEEFNINLRAVDTTTVGIALDETTTKADVENLLKVFD 426 (939)
T ss_pred -----CCCHHHHHHHHHHCCCeeeecCCCEEEEEeecCCCHHHHHHHHHHhc
Confidence 0113678899999999988654444554 46789999999999984
No 380
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=98.40 E-value=1.6e-05 Score=73.29 Aligned_cols=277 Identities=18% Similarity=0.181 Sum_probs=142.2
Q ss_pred EeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcC-CCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHH
Q 011856 160 FVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAG-SGVATLGLPDSPGVPKGATYETLTAPFNDVSALEN 238 (476)
Q Consensus 160 ~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~ 238 (476)
-+-|||.|+..+......+-.+..|.+..+.+-.+. ......| ..+...++-+.. ...+ |++.+-.
T Consensus 104 QslsGTGAl~~~A~Fl~~~~~~~~VY~SnPTW~nH~-~if~~aGf~tv~~Y~yWd~~---------~k~~---d~e~~Ls 170 (410)
T KOG1412|consen 104 QSLSGTGALRIAADFLATFYNKNTVYVSNPTWENHH-AIFEKAGFTTVATYPYWDAE---------NKCV---DLEGFLS 170 (410)
T ss_pred eeccccchhhhhHHHHHHhcccceeEecCCchhHHH-HHHHHcCCceeeeeeeecCC---------Ccee---cHHHHHH
Confidence 456899999888875444445555666566554433 3333333 112111111110 0111 6777777
Q ss_pred HHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccc----ccchhhcc---CCCCchh-
Q 011856 239 LFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLA----YGGAQEYF---GVTPDLT- 310 (476)
Q Consensus 239 ~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g----~~~~~~~~---g~~pDi~- 310 (476)
.|+..++....++.-.-++++| +.|+.|-+..|.++-++.+.+-++|-+|-||-.| ..|+..+| |. +=++
T Consensus 171 dl~~APe~si~iLhaCAhNPTG-mDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g~-e~fv~ 248 (410)
T KOG1412|consen 171 DLESAPEGSIIILHACAHNPTG-MDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQGF-ELFVC 248 (410)
T ss_pred HHhhCCCCcEEeeeccccCCCC-CCCCHHHHHHHHHHHHhcCceeeeehhhcccccCCccccHHHHHHHHhcCC-eEEEE
Confidence 7776543332333333355555 5677777999999999999999999999999333 23444332 21 1123
Q ss_pred -hhhhhcC-CCCcEEEE--Ee-cHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcCCCHH-----------HHHH
Q 011856 311 -TLGKIIG-GGLPVGAY--GG-RRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKEPGTY-----------EYLN 374 (476)
Q Consensus 311 -t~sK~lg-~G~~iG~~--~~-~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~-----------~~~~ 374 (476)
+|+|-+| -|=|+|.+ ++ ++..+..+...-.....++++ ||++.-|-+ +-+.+..++++ .++.
T Consensus 249 QSFaKNfGlYneRvGnltvv~~n~a~i~~v~SQl~lviR~~~S-NPPAyGArI-V~kvL~tP~lre~W~~sik~MssRI~ 326 (410)
T KOG1412|consen 249 QSFAKNFGLYNERVGNLTVVVNNPAVIAGVKSQLTLVIRSNWS-NPPAYGARI-VHKVLSTPELREQWIQSIKTMSSRIK 326 (410)
T ss_pred hhhhhhcccccccccceEEEecChhHHHHHHHHHHHHHhhccC-CCcchhhHH-HHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 6999998 46788876 33 455554443211122344555 333333222 22334333332 3344
Q ss_pred HHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHH-HCCeEeccCCCcceEEeC
Q 011856 375 KITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGML-EEGVYFAPSQFEAGFTSL 453 (476)
Q Consensus 375 ~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~~~~~~~~~~ 453 (476)
+++..|++.|..+.. .+-...+...-+|+.+. .- ...-++.|. .+.|++.+.| .+.+ .
T Consensus 327 ~MR~aLrd~L~aL~T-PGtWDHI~~QiGMFSyT--GL---------------tp~qV~~li~~h~vyLl~~G--RIni-s 385 (410)
T KOG1412|consen 327 KMRTALRDHLVALKT-PGTWDHITQQIGMFSYT--GL---------------TPAQVDHLIENHKVYLLSDG--RINI-S 385 (410)
T ss_pred HHHHHHHHHHHhcCC-CCcHHHHHhhccceeec--CC---------------CHHHHHHHHHhceEEEecCC--cEee-e
Confidence 444444555544421 12222222222233322 10 012344555 5578877764 2333 2
Q ss_pred CCcHHHHHHHHHHHHHHHHHh
Q 011856 454 AHSSDDIQHTITAAEKVKMRF 474 (476)
Q Consensus 454 ~~t~e~i~~~~~~l~~~~~~~ 474 (476)
..+...+|....+++++++.+
T Consensus 386 GLN~~NveyVAkAIde~Vr~~ 406 (410)
T KOG1412|consen 386 GLNMKNVEYVAKAIDETVRAI 406 (410)
T ss_pred ccccccHHHHHHHHHHHHHhh
Confidence 345566777777777777654
No 381
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=98.38 E-value=0.00024 Score=67.00 Aligned_cols=315 Identities=16% Similarity=0.104 Sum_probs=159.8
Q ss_pred CHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHh---ccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCC
Q 011856 138 CLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARA---FTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDS 214 (476)
Q Consensus 138 ~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~---~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~ 214 (476)
+.....|++.+.+.+ +.+.++.+.-|-.|=...+...+. .-++.+.+++.+.|+-.+.+-....|.-+.....+..
T Consensus 78 srs~~~L~~avkdif-Gfq~~iPthQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~FdTTr~h~~~ng~~~~n~~~~ea 156 (471)
T COG3033 78 SRSYYALADAVKDIF-GFQYTIPTHQGRGAENILIPILIKKGEQEPGSKMVAFSNYHFDTTRGHIQINGATPRNVYVDEA 156 (471)
T ss_pred cccHHHHHHHHHHhc-CceeeeeccCCccHHHHHHHHHhhhccccCCccccccccceecchhHHHHhcCCcccccccccc
Confidence 444567888888888 678888888766554443333222 2233566666665555555555555543322211111
Q ss_pred CCCCCCCCCceeeccCC---CHHHHHHHHhcCC-CCeEEEEEc-ccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccc
Q 011856 215 PGVPKGATYETLTAPFN---DVSALENLFENNK-GEIAAIILE-PVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM 289 (476)
Q Consensus 215 ~~~~~~~~~~~~~~~~~---d~~~le~~l~~~~-~~~a~vi~e-p~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~ 289 (476)
....+..|+. |++.|+++|++-+ +++..|++. .+|+.+|.-..-+. ++++++||++||+.++.|-+.
T Consensus 157 -------~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n-~r~v~~ia~ky~ipvv~Da~R 228 (471)
T COG3033 157 -------FDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMAN-MKAVYEIAKKYDIPVVMDAAR 228 (471)
T ss_pred -------ccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHh-HHHHHHHHHHcCCcEEeehhh
Confidence 1112233332 8999999998744 345554443 33444665544444 999999999999999999766
Q ss_pred c----Cc---cc-cc-cchhhc-----cCCCCchhhhh-hhcCCC-CcEEEE-EecHH----HHHhhcCCCC-ccccCCC
Q 011856 290 T----GF---RL-AY-GGAQEY-----FGVTPDLTTLG-KIIGGG-LPVGAY-GGRRD----IMEMVAPAGP-MYQAGTL 347 (476)
Q Consensus 290 ~----g~---r~-g~-~~~~~~-----~g~~pDi~t~s-K~lg~G-~~iG~~-~~~~~----i~~~l~~~~~-~~~~~t~ 347 (476)
. -| |. |+ .+..+. +. ..|-.++| |- -| ..+|.+ +.+++ +.+.++...- ..-+.||
T Consensus 229 faENaYFIk~rE~gYrd~sI~~IarEm~s-YaD~~~mS~KK--D~lvnmGGfl~~~D~~~fDvy~~~~~~~V~~eG~~tY 305 (471)
T COG3033 229 FAENAYFIKQREPGYRDWSIEEIAREMYS-YADGCTMSAKK--DGLVNMGGFLCFKDDSFFDVYEECRTLVVVQEGFPTY 305 (471)
T ss_pred hhhhhhhhhhcCcccccccHHHHHHHHHh-hhhhheeeccc--cceeccccEEEecCccHHHHHHHHHhheEeecccccc
Confidence 2 12 11 11 111110 00 11222333 21 13 256666 44554 4444432111 1112333
Q ss_pred CCc-HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHH
Q 011856 348 SGN-PLAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTK 426 (476)
Q Consensus 348 ~~~-~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~ 426 (476)
++- --.+.+....|...-+.+++++--+..+||.++|.+. +++..-+..|.-..++... +.+....+.--
T Consensus 306 Ggl~GrdmealAvGL~e~~~~~yl~~Rv~Qv~YL~~~l~~~----GVpi~~paGGHavfvda~~-----~lphip~eqFp 376 (471)
T COG3033 306 GGLAGRDMEALAVGLREGVNFDYLAHRVAQVQYLADGLEEA----GVPIVQPAGGHAVFVDAGK-----FLPHIPAEQFP 376 (471)
T ss_pred CcccchhHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhc----CCeeEecCCCceEEeehhh-----hcCCCChhhCc
Confidence 321 1122222223433334677777777888999998875 3433333334333333211 11111111111
Q ss_pred HHHHHHHH-HHCCeEeccCC-----------------CcceEE---eCCCcHHHHHHHHHHHHHHHHH
Q 011856 427 FARFYRGM-LEEGVYFAPSQ-----------------FEAGFT---SLAHSSDDIQHTITAAEKVKMR 473 (476)
Q Consensus 427 ~~~~~~~l-~~~Gv~~~~~~-----------------~~~~~~---~~~~t~e~i~~~~~~l~~~~~~ 473 (476)
++.++-.| ++.||-....+ ...+|+ ...-|.+++|..++.++++.+.
T Consensus 377 aqala~ely~e~GiRavElG~~~~~rd~ktg~q~~~~~elvRltipRrtYt~~HmD~V~~a~~~l~e~ 444 (471)
T COG3033 377 AQALACELYKEAGIRAVELGSFSLGRDPKTGKQHPPPAELVRLTIPRRTYTQTHMDFVIEAFKALKEN 444 (471)
T ss_pred HHHHHHHHHHHhCeeeeeeeceecccCCCccccCCCchheeeEeccccccchhHHHHHHHHHHHHHhc
Confidence 23444333 35566433211 012344 2466899999999999988753
No 382
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=98.32 E-value=8e-05 Score=68.56 Aligned_cols=328 Identities=16% Similarity=0.112 Sum_probs=184.8
Q ss_pred ccCCCCcHHHHHHHHHHHHhcC---CCC---C--C-CHHHHHHHHHHHhhCC-CCCeEEEeCCHHHHHHHHHHHHHhccC
Q 011856 111 AIIGHADDQVLAALGETMKKGT---SFG---A--P-CLLENVLAEMVISAVP-SIEMVRFVNSGTEACMGVLRLARAFTG 180 (476)
Q Consensus 111 ~~lG~~~p~v~~a~~~~l~~~~---~~~---~--~-~~~~~~la~~l~~~~~-~~e~v~~~~sGseA~~~al~~ar~~~~ 180 (476)
|.||.-+....+.+.+.+++.. .++ + | ...-+-+-..++...+ ..+.|-++||=|--+...+.....-|.
T Consensus 74 NSLGLmPK~t~~~~~~eLDkWak~av~gH~~GkvPW~~~De~il~l~~~iVGA~e~EvavmNsLTvNlh~Ll~sFyKPTe 153 (465)
T KOG3846|consen 74 NSLGLMPKSTRNSINAELDKWAKCAVEGHFKGKVPWVSIDEPILPLLAPIVGAQENEVAVMNSLTVNLHSLLISFYKPTE 153 (465)
T ss_pred cccccCchhhHhHHHHHHHHHHhhhhhcccccccceeecchhhhhhhhhhccCCchhhhhHhhhhhHHHHHHHHhcCCcc
Confidence 7899999999998888888731 111 1 1 0111223334444444 356788888766555554443222243
Q ss_pred -CceEEEEeCCCCCCchhHHhh---cCCCCccCC--CCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcc
Q 011856 181 -RERIIKFEGCYHGHADPFLVK---AGSGVATLG--LPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEP 254 (476)
Q Consensus 181 -~~~ii~~~~~yhg~~~~~~~~---~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep 254 (476)
|-+|+.-..+|...+...-.. .|..+.... +....| .+. -..+++-+.|++++++++.|+...
T Consensus 154 kR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~~iePREG------Eet-----lRteDILd~IEkngDeiA~v~fSG 222 (465)
T KOG3846|consen 154 KRFKILLEKKAFPSDHYAIESQCKLHGISPENSMIQIEPREG------EET-----LRTEDILDTIEKNGDEIALVCFSG 222 (465)
T ss_pred hhhhhhhccCCCCchHHHHHhhhhhcCCChHHheEEeccccc------ccc-----hhHHHHHHHHHhcCCeEEEEEeec
Confidence 445555555666554443322 232111000 000001 001 135777778888889999999999
Q ss_pred cCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCccccc-cchhhccCCCCchhh--hhhhcCCCC-cEEEEEecHH
Q 011856 255 VVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY-GGAQEYFGVTPDLTT--LGKIIGGGL-PVGAYGGRRD 330 (476)
Q Consensus 255 ~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~-~~~~~~~g~~pDi~t--~sK~lg~G~-~iG~~~~~~~ 330 (476)
++--+|.... +.+|-.--+..|+++-+|=+|. + |. ..-...+|+ |..| -=|.+.+|- .||.+...+.
T Consensus 223 vqyYTGQ~Fd----i~aIT~Agq~kgc~VGfDLAHA-v--gNVpL~LHdWgV--DFACWCSYKYlnaGaGgIgGlFvHek 293 (465)
T KOG3846|consen 223 VQYYTGQYFD----IGAITFAGQFKGCLVGFDLAHA-V--GNVPLQLHDWGV--DFACWCSYKYLNAGAGGIGGLFVHEK 293 (465)
T ss_pred ceeecccccc----hhhhhhcccCCCcEechhhhhh-h--cCCceEEeecCC--ceEEEeeecccccCCCccceeeeehh
Confidence 9988998888 7777766677799999998884 2 11 111123454 5554 447766442 4666655443
Q ss_pred HHHhhcCC----------CC-----------ccccCCCCCcH-HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHh
Q 011856 331 IMEMVAPA----------GP-----------MYQAGTLSGNP-LAMTAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAG 388 (476)
Q Consensus 331 i~~~l~~~----------~~-----------~~~~~t~~~~~-~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~ 388 (476)
......++ .+ ...+.-.+.+| +..+|....|+...+-. .+.++++.-+|..-|+.+.
T Consensus 294 h~~~~~prl~GWwgh~~s~RF~Mdnvl~lipGa~GfRiSNPpi~~v~al~~SLe~F~q~~-~~~lRkrS~lLTgYleyL~ 372 (465)
T KOG3846|consen 294 HTKESLPRLAGWWGHDPSKRFQMDNVLELIPGALGFRISNPPIIDVVALRSSLELFAQFN-INELRKRSLLLTGYLEYLL 372 (465)
T ss_pred hhcchhhHHhhhccCCcchhhhhccccccCccccccccCCCcHhHHHHHHhhHHHHHHhh-HHHHhhhhhhHHhHHHHHH
Confidence 32221110 00 11111223333 34445556677665422 4556665555544444432
Q ss_pred h-----hcCC-----------ceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCCcceEE-
Q 011856 389 K-----KAGH-----------AICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFT- 451 (476)
Q Consensus 389 ~-----~~~~-----------~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~- 451 (476)
+ +++. +..+...|.-+.+.|..+. ..+.+.|.++|+.+.....+.+|+
T Consensus 373 k~~~g~~~~~rt~Kl~~~IiTP~~~~erGcQLsl~Fssp~---------------~~vfqeL~krGv~~DkR~PNvIRvA 437 (465)
T KOG3846|consen 373 KASKGYKHPLRTEKLFFTIITPTSTDERGCQLSLYFSSPT---------------PKVFQELHKRGVIGDKRRPNVIRVA 437 (465)
T ss_pred HHhcccCchhhhcceeEEEeCCcccccccceEEEEeCCCc---------------hHHHHHHHHcCeeccccCCCceEee
Confidence 2 1111 1223345666666654321 467899999999988777777776
Q ss_pred --eCCCcHHHHHHHHHHHHHHHHHh
Q 011856 452 --SLAHSSDDIQHTITAAEKVKMRF 474 (476)
Q Consensus 452 --~~~~t~e~i~~~~~~l~~~~~~~ 474 (476)
++..+-.|+-.++..|.+++..+
T Consensus 438 PvpLYN~f~Dvy~f~n~L~e~~d~~ 462 (465)
T KOG3846|consen 438 PVPLYNTFSDVYIFVNALNEAMDKL 462 (465)
T ss_pred cchhhccHHHHHHHHHHHHHHHHHh
Confidence 57889999999999999988653
No 383
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=98.25 E-value=8.1e-05 Score=72.03 Aligned_cols=301 Identities=13% Similarity=0.054 Sum_probs=149.1
Q ss_pred HHHHHHHHhhCC--CCCeEEEeCCHHHHHHH-HHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCC
Q 011856 142 NVLAEMVISAVP--SIEMVRFVNSGTEACMG-VLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVP 218 (476)
Q Consensus 142 ~~la~~l~~~~~--~~e~v~~~~sGseA~~~-al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~ 218 (476)
..|..-+.+..+ +...++..+-.|--... .+...| ...+.+.+++..--|-+..-++...|..+..++...
T Consensus 59 n~l~~d~~~~~G~~~~~~~~~vP~atgm~l~l~l~~l~-~r~~a~~Viw~ridqkSc~kai~~AGl~~~vV~~~~----- 132 (389)
T PF05889_consen 59 NSLVLDALRLAGLRSVKSCFVVPMATGMSLTLCLLALR-MRPKAKYVIWPRIDQKSCFKAIERAGLEPVVVENVL----- 132 (389)
T ss_dssp HHHHHHHHHHTTHTTHCEEEEESS-HHHHHHHHHHHHH-HHCT--EEEEEEEETHHHHHHHHHTT-EEEEE-EEE-----
T ss_pred HHHHHHHHHHcCCccccceEEEecccccHHHHHHHHHh-cccCCceEEEeeccccchHHHHHhcCCeEEEeeccC-----
Confidence 344444445554 35667777654433222 222222 234455555555555555555555565433221100
Q ss_pred CCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-ccccc
Q 011856 219 KGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYG 297 (476)
Q Consensus 219 ~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~ 297 (476)
..+.+.. |.+.+|+.+++.+++..+.++.......+..+ +-+++|.++|++||++.|+.-+|+ + ..-..
T Consensus 133 ---~~d~l~t---d~~~ie~~i~~~G~~~iLcvltttscfapr~~---D~i~~IakiC~~~~IPhlvNnAYg-vQ~~~~~ 202 (389)
T PF05889_consen 133 ---EGDELIT---DLEAIEAKIEELGADNILCVLTTTSCFAPRLP---DDIEEIAKICKEYDIPHLVNNAYG-VQSSKCM 202 (389)
T ss_dssp ---ETTEEEE---HHHHHHHHHHHHCGGGEEEEEEESSTTTTB-------HHHHHHHHHHHT--EEEEGTTT-TT-HHHH
T ss_pred ---CCCeeec---cHHHHHHHHHHhCCCCeEEEEEecCccCCCCC---ccHHHHHHHHHHcCCceEEccchh-hhHHHHH
Confidence 0111111 68889999976554544444444433333332 238999999999999999999994 3 11000
Q ss_pred c-hh--hccCCCCc-hhhhhhhcCCCCcEEEEE-ecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC---CCH
Q 011856 298 G-AQ--EYFGVTPD-LTTLGKIIGGGLPVGAYG-GRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE---PGT 369 (476)
Q Consensus 298 ~-~~--~~~g~~pD-i~t~sK~lg~G~~iG~~~-~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~---~~~ 369 (476)
- .. ...|..|- +-++.|-|--+...+-+. ..+..++.+.+. +-+-. +.+|. .- ...+|..+.. ..+
T Consensus 203 ~~i~~a~~~GRvda~vqS~dkNF~VPvGgai~As~~~~~i~~vs~~---YpGRa-s~sp~-ld-~~itLl~LG~~g~~~l 276 (389)
T PF05889_consen 203 HLIQQAWRVGRVDAFVQSTDKNFMVPVGGAIMASFDPSGILAVSKE---YPGRA-SASPS-LD-LFITLLSLGCTGYGAL 276 (389)
T ss_dssp HHHHHHHHHSTCSEEEEEHHHHHCEESSHEEEEESSHHHHHHHHHT---SHSHB-TSHHH-HH-HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCcceeeeecCCCEEecCCCcEEEecCHHHHHHHHHH---hhhhh-hcccc-hH-HHHHHHHHhhhHHHHH
Confidence 0 00 12344433 236778775221122232 345677766531 11111 11221 12 2223333322 556
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCC-ceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeE----eccC
Q 011856 370 YEYLNKITGELTQGIIDAGKKAGH-AICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVY----FAPS 444 (476)
Q Consensus 370 ~~~~~~~~~~l~~~L~~~~~~~~~-~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~----~~~~ 444 (476)
+....+.-.+++++|+++..+++. ..+.+.....+.+++..-. . . .. .....|...|..+||. +.+.
T Consensus 277 l~~r~~~f~~l~erl~~~aee~~e~ll~~p~N~is~a~tl~~l~--~---~--~~-k~~~~lgs~Lf~R~VsG~RvV~~~ 348 (389)
T PF05889_consen 277 LKERKASFPYLKERLKKWAEEVGERLLETPRNHISMAFTLDTLY--E---I--SQ-KDGTFLGSMLFKRGVSGIRVVTPG 348 (389)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTEEBSSSTT-SSEEEEE-TTCC--T---C--CS-SHHHHHHHHHHHTTEESSEEEETS
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCeeEEEECccch--h---h--cc-chhhhHHHHHHhCCcccceeeccC
Confidence 777788888999999998877762 2233344445566553211 0 0 01 2235677888899764 2222
Q ss_pred C---------C--cceEE--eCCCcHHHHHHHHHHHHHHHH
Q 011856 445 Q---------F--EAGFT--SLAHSSDDIQHTITAAEKVKM 472 (476)
Q Consensus 445 ~---------~--~~~~~--~~~~t~e~i~~~~~~l~~~~~ 472 (476)
+ + +++.+ .+..++||+|.++++|+++++
T Consensus 349 ~~~~tsh~~~yp~~Ylt~AsaiG~~~eevd~~v~rL~k~i~ 389 (389)
T PF05889_consen 349 GKKQTSHSSNYPCPYLTAASAIGMTREEVDYFVKRLDKIIK 389 (389)
T ss_dssp SCEEETTSS--SSSEEEEEE-TT--HHHHHHHHHHHHHHHH
T ss_pred CCcccccCCCCchHHHHHHHHhCCCHHHHHHHHHHHHHHhC
Confidence 1 1 22333 367899999999999999874
No 384
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=98.05 E-value=0.00045 Score=67.48 Aligned_cols=335 Identities=16% Similarity=0.139 Sum_probs=173.0
Q ss_pred cCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhc-----CCCCCCCHHHHHHHHHHHhhCCCCCe--EEEeCCHHHHH
Q 011856 96 IDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKG-----TSFGAPCLLENVLAEMVISAVPSIEM--VRFVNSGTEAC 168 (476)
Q Consensus 96 ~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~-----~~~~~~~~~~~~la~~l~~~~~~~e~--v~~~~sGseA~ 168 (476)
.||+.-+..+++. .+.+ +++..+-+.+.+.+. .-|......+.+.-..++..+.+.+. =.-|.||||+.
T Consensus 76 ld~~~~~~~vS~~--v~~~--~~~~~~l~~~~~~k~N~l~~d~fp~~~~~e~~~Vnm~~~L~~~~~~~~g~~t~G~Ses~ 151 (491)
T KOG1383|consen 76 LDGNPRLGLASGV--VYWG--EPELDKLIMEAYNKFNPLHPDEFPVVRKLEAECVNMIANLFNAPSDSCGCGTVGGSESG 151 (491)
T ss_pred cCCCcccCeeeEE--EecC--CcchhhHHHHHHhhcCccCccccchhHHHHHHHHHHHHHHhcCCccccCccccccchHH
Confidence 4555333333332 4444 455555455555442 12344567788888888888864332 24577899998
Q ss_pred HHHHHHHHhccC------CceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhc
Q 011856 169 MGVLRLARAFTG------RERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFEN 242 (476)
Q Consensus 169 ~~al~~ar~~~~------~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~ 242 (476)
.++.+.-|.... +..++.. ...|...+.+...-+..... +|..++ .+.+ |+..+.+.+.+
T Consensus 152 l~~~k~~~~~r~~~k~I~~p~iv~~-~~v~~a~eK~a~yf~v~l~~--V~~~~~--------~~~~---D~~k~~~~i~e 217 (491)
T KOG1383|consen 152 LAAKKSYRNRRKAQKGIDKPNIVTP-QNVHAAFEKAARYFEVELRE--VPLDEG--------DYRV---DPGKVVRMIDE 217 (491)
T ss_pred HHHHHHHHHHHHhccCCCCccccch-HHHHHHHHHHHhhEEEEEEe--eecccc--------ceEe---cHHHHHHHhcc
Confidence 887774432211 2223332 12222222111111110001 111111 1111 78888888875
Q ss_pred CCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHH-hCCEEEEeccccCc-cccccchhhccCCC-C---chhhhh-h-
Q 011856 243 NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKE-NGALLIFDEVMTGF-RLAYGGAQEYFGVT-P---DLTTLG-K- 314 (476)
Q Consensus 243 ~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~-~g~llI~DEv~~g~-r~g~~~~~~~~g~~-p---Di~t~s-K- 314 (476)
++.+++.+-.+-+.|.+.+ .++|.++.-+ +++.+.+|-.-.|| -.........||+. | .+.+-+ |
T Consensus 218 ---Nti~lv~~~~~~p~G~~e~----ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~~~~fdFr~p~V~Sisa~~HKY 290 (491)
T KOG1383|consen 218 ---NTIMLVGSLPNFPTGEIED----VEKLADLLLEIWDIPIHVDACLGGFINPAGYLNEEEFDFRVPGVTSISADGHKY 290 (491)
T ss_pred ---ceEEEEEEcCCCCccchhh----HHHHHHHHHHHhCCceeecccCccccccccccCccccccCCCCceeEeecccee
Confidence 6788887777767788888 9999999988 99999999999998 54111122234442 2 222333 2
Q ss_pred hcC-CCCcEEEEEec-HHH-HHhhcC----CCCccccCCCCCcH--HHHHHHHHHHHHhcCC---CHHHHHHHHHHHHHH
Q 011856 315 IIG-GGLPVGAYGGR-RDI-MEMVAP----AGPMYQAGTLSGNP--LAMTAGIHTLKRLKEP---GTYEYLNKITGELTQ 382 (476)
Q Consensus 315 ~lg-~G~~iG~~~~~-~~i-~~~l~~----~~~~~~~~t~~~~~--~~~aaa~aal~~~~~~---~~~~~~~~~~~~l~~ 382 (476)
+|. .| +||++-+ +++ .+++.- .+..+-..|.+++- ...+++.+++-.+..+ +..+++.+....+++
T Consensus 291 Gl~~~G--~~~vl~r~k~~~~~q~~~~~~w~Gg~y~s~TlngSR~g~~va~~wa~~~~lG~eGY~~~~~~ive~~~~l~e 368 (491)
T KOG1383|consen 291 GLAPAG--SSWVLYRNKELLPHQLFFHTDWLGGIYASPTLNGSRPGSQVAAQWAALMSLGEEGYRENTQNIVETARKLRE 368 (491)
T ss_pred eeeecC--cEEEEEcccccccceEEEeccccCccccCcccccCCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 222 22 6777443 332 222221 01122222333321 2233344444334333 344566677778888
Q ss_pred HHHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCCc---ceEEeCCCcHHH
Q 011856 383 GIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFE---AGFTSLAHSSDD 459 (476)
Q Consensus 383 ~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~---~~~~~~~~t~e~ 459 (476)
+++++. ... +-+...+ .+...+.. ...--++...|.+.|-.+..-..+ ++++...+.+++
T Consensus 369 gie~i~-~i~----i~gkp~v-s~~~~~s~-----------~~~i~elsd~l~~~GW~lnalq~P~a~Hi~vt~~~~~~~ 431 (491)
T KOG1383|consen 369 GIENIK-GIK----IVGKPLV-SFILFGSN-----------DVNIFELSDLLRKKGWILNALQFPAAIHICVTRVHARED 431 (491)
T ss_pred hhhccc-cce----ecCCCcE-EEEEccCC-----------ccchhhhhHHHHhcCcCccccCCCCceEEEEEeeeccHH
Confidence 887742 111 1122222 22222211 011246778899999877654433 234444555555
Q ss_pred -HHHHHHHHHHHHHHh
Q 011856 460 -IQHTITAAEKVKMRF 474 (476)
Q Consensus 460 -i~~~~~~l~~~~~~~ 474 (476)
.|+++.-+++++.++
T Consensus 432 ~A~~~v~Di~~~~~el 447 (491)
T KOG1383|consen 432 VADRFVADIRKVVEEL 447 (491)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 688888888888765
No 385
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=97.93 E-value=0.0003 Score=66.50 Aligned_cols=193 Identities=11% Similarity=0.048 Sum_probs=102.7
Q ss_pred CeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccccchhhccCCCCchh--hhhhhcC-CCCc
Q 011856 246 EIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAYGGAQEYFGVTPDLT--TLGKIIG-GGLP 321 (476)
Q Consensus 246 ~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~~~~~~~~g~~pDi~--t~sK~lg-~G~~ 321 (476)
...=+++.|+|+.|.... .+++.-+..+|.|=+|--= .+.-.. -..-||+ |+||.-| +|.|
T Consensus 138 ~~IElVTSPNNPDG~lr~----------~V~~g~~~k~I~D~AYYWPhyTpI~~-----~aD~DiMLFT~SK~TGHAGSR 202 (363)
T PF04864_consen 138 PYIELVTSPNNPDGQLRE----------AVLNGSSGKVIHDLAYYWPHYTPITA-----PADHDIMLFTLSKLTGHAGSR 202 (363)
T ss_dssp GEEEEEESS-TTT----------------SSTTTEEEEEEE-TT-STTTS---S------B--SEEEEEHHHHCS-GGG-
T ss_pred CeEEEEeCCCCCcccccc----------hhcCCCCcceeeeeeeecccccccCC-----CCCCceEEEEEecccCccccc
Confidence 455577788766543221 2234455667999888410 111111 1123655 8999999 8999
Q ss_pred EEEEEecH-HHHHhhcCCCCccccCCCCCcHHHHHHHHHHHHHhcC--------CCHHHHHHHHHHHHHHHHHHHhhhcC
Q 011856 322 VGAYGGRR-DIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLKE--------PGTYEYLNKITGELTQGIIDAGKKAG 392 (476)
Q Consensus 322 iG~~~~~~-~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--------~~~~~~~~~~~~~l~~~L~~~~~~~~ 392 (476)
+||.+.++ ++.+.+. .+...+|.+.+-=+|.-++..|+.+.+ .++.+.-.+..+.--++|+++.....
T Consensus 203 ~GWAlVKD~~Va~kM~---~y~~lnTiGvS~dsQLRa~kiLk~v~~~~~~~~~~~~~F~f~~~~M~~RW~~L~~~~~~S~ 279 (363)
T PF04864_consen 203 FGWALVKDEEVAKKMT---KYMELNTIGVSRDSQLRALKILKVVLDGYGTEKGTEDIFHFGYSTMRERWEKLRAAVSASK 279 (363)
T ss_dssp EEEEEES-HHHHHHHH---HHHHHHCSS--HHHHHHHHHHHHHHHHHCCHHTTTTSHHHHHHHHHHHHHHHHHHHHCCSS
T ss_pred cceeeecCHHHHHHHH---HHHHHhcccCcHHHHHHHHHHHHHHHhcccCCCCccchHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99997765 4555554 344566778777777777766665432 13444333333333334444433221
Q ss_pred C-------------ceEe-eeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCC-----CcceEEeC
Q 011856 393 H-------------AICG-GYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ-----FEAGFTSL 453 (476)
Q Consensus 393 ~-------------~~~v-~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~-----~~~~~~~~ 453 (476)
. ...+ .....+.|+....+.. ......|++.||+.+.+. ...+|+++
T Consensus 280 rFSLq~~~~~yC~ff~~~~~psPafAWlkCe~eed--------------~DC~~~l~~~~I~tr~G~~fga~~ryVRlSm 345 (363)
T PF04864_consen 280 RFSLQKFSPQYCNFFKRVREPSPAFAWLKCEREED--------------EDCYAVLREAKIITRSGVLFGADSRYVRLSM 345 (363)
T ss_dssp SEEE---SCEEETTTTCEEE---SEEEEEESSCGG--------------SSHHHHHHCTTEEEEEGGGGTS-TTEEEEES
T ss_pred ceecCcCCchhccccccccCCCCCeEEEecCCccc--------------ccHHHHHHhCCcccCCCCccCCCCCeEEEec
Confidence 1 1112 2234555665532211 234567778899887662 34689999
Q ss_pred CCcHHHHHHHHHHHHHH
Q 011856 454 AHSSDDIQHTITAAEKV 470 (476)
Q Consensus 454 ~~t~e~i~~~~~~l~~~ 470 (476)
..++++.|.++++|...
T Consensus 346 l~~~d~Fd~l~~rL~~l 362 (363)
T PF04864_consen 346 LKRDDDFDQLLERLSKL 362 (363)
T ss_dssp SS-HHHHHHHHHHHHCC
T ss_pred cCCHHHHHHHHHHHHhh
Confidence 99999999999999753
No 386
>PRK12566 glycine dehydrogenase; Provisional
Probab=97.77 E-value=0.0072 Score=65.58 Aligned_cols=268 Identities=15% Similarity=0.115 Sum_probs=140.9
Q ss_pred HHHHHHHHHhhCCCCC--eEEEeCCHHHHHHHHHHHHHhccC--CceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCC
Q 011856 141 ENVLAEMVISAVPSIE--MVRFVNSGTEACMGVLRLARAFTG--RERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPG 216 (476)
Q Consensus 141 ~~~la~~l~~~~~~~e--~v~~~~sGseA~~~al~~ar~~~~--~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~ 216 (476)
..++-..+++++ +.| +.-+...+|.+-|+++ +++.+++ ++++ +.+...|..+...+..... ..|
T Consensus 126 l~e~Qtmi~~Lt-Gm~vaNASl~D~atA~aEA~~-ma~~~~~~k~~~~-~v~~~~hP~~~~v~~t~~~---------~~g 193 (954)
T PRK12566 126 LLNFQQMTIDLT-GLDLANASLLDEATAAAEAMA-LAKRVAKSKSNRF-FVDEHCHPQTLSVLRTRAE---------GFG 193 (954)
T ss_pred HHHHHHHHHHHh-CchhhhhhhccchhHHHHHHH-HHHHHhhcCCCEE-EECCCCCHHHHHHHHHhhh---------cCC
Confidence 346667777777 444 4455556666666333 3434443 4454 4455666655544432111 111
Q ss_pred CCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEE-cccCCCCCcccCCHHHHHHHHHHHHHhCCEEEE--eccc-cCc
Q 011856 217 VPKGATYETLTAPFNDVSALENLFENNKGEIAAIIL-EPVVGNSGFIAPKPDFLNAIRRITKENGALLIF--DEVM-TGF 292 (476)
Q Consensus 217 ~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~-ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~--DEv~-~g~ 292 (476)
+ +++ .+++++.+. +++++|++ .|+ .-|.+.. +++|.++++++|+++|+ |=.- +.+
T Consensus 194 ~------~i~------~~~~~~~~~---~~~~~v~vq~P~--~~G~i~d----~~~i~~~~h~~gal~~~~~d~laL~ll 252 (954)
T PRK12566 194 F------ELV------VDAVDNLAA---HAVFGALLQYPD--THGEIRD----LRPLIDQLHGQQALACVAADLLSLLVL 252 (954)
T ss_pred c------EEE------EcchhhcCC---CCEEEEEEECCC--CceEEcc----HHHHHHHHHHcCCEEEEEeCHHHHhCC
Confidence 1 111 133444443 26888877 443 3577765 89999999999998773 2222 222
Q ss_pred -cccccchhhccCCCCchh-----hhhhhcC-CCCcEEEEEecHHHHHhhcC----------CCCc--------------
Q 011856 293 -RLAYGGAQEYFGVTPDLT-----TLGKIIG-GGLPVGAYGGRRDIMEMVAP----------AGPM-------------- 341 (476)
Q Consensus 293 -r~g~~~~~~~~g~~pDi~-----t~sK~lg-~G~~iG~~~~~~~i~~~l~~----------~~~~-------------- 341 (476)
..|.++ .||+ .||=-++ ||--.|++.++++++..+-- ..+.
T Consensus 253 ~~Pge~G--------ADI~vG~~Q~fGvp~~~GGP~ag~~a~~~~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQHIRR 324 (954)
T PRK12566 253 TPPGELG--------ADVVLGSTQRFGVPMGYGGPHAAYFACRDDYKRAMPGRIIGVSRDARGNTALRMALQTREQHIRR 324 (954)
T ss_pred CChhhcC--------CcEEeeCCCcCCCCCCCCCCCeeeeeehHHHHhhCCCCccceeecCCCCeeeehhhhHHHHHhhh
Confidence 333332 3665 2444445 44458888888887766521 0000
Q ss_pred -cccCCCCCcHHHHHHHHHHHHHh-cCC---CHHHHHHHHHHHHHHHHHHHhhhcCCceEeeeeceeEEEEEecCCCcCc
Q 011856 342 -YQAGTLSGNPLAMTAGIHTLKRL-KEP---GTYEYLNKITGELTQGIIDAGKKAGHAICGGYISGMFGFFFTEGPVYNF 416 (476)
Q Consensus 342 -~~~~t~~~~~~~~aaa~aal~~~-~~~---~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~ 416 (476)
.-.+..+.|...++...+..-.+ ..+ ++-+++..+..++.++|.+.+.+. . ....|--+.+...
T Consensus 325 eKAtSNICT~qaL~A~~a~~Y~~~~Gp~Gl~~ia~~~~~~a~~l~~~l~~~g~~~--~----~~~fF~~~~v~~~----- 393 (954)
T PRK12566 325 EKANSNICTAQVLLANIAGFYAVYHGPEGLKRIAQRVHRLTAILAAGLEAKGIKR--L----NRHFFDTLTLEVG----- 393 (954)
T ss_pred ccccchhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCcc--c----cCCccceEEEEcc-----
Confidence 00122233333222222222122 212 334456667778888887743221 1 1111212222110
Q ss_pred hhhcccchHHHHHHHHHHHHCCeEeccCCCcceEEe--CCCcHHHHHHHHHHHH
Q 011856 417 EDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFTS--LAHSSDDIQHTITAAE 468 (476)
Q Consensus 417 ~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~~--~~~t~e~i~~~~~~l~ 468 (476)
. ...++.+..+++|+.++-.....+.++ =.+|++|++.++..|.
T Consensus 394 ------~--~~~~~~~~a~~~~~n~r~~~~~~~~~s~de~~~~~~~~~~~~~f~ 439 (954)
T PRK12566 394 ------G--AQAAIIESAEAARINLRILGRGRLGVSLDETCDEATVARLFDIFL 439 (954)
T ss_pred ------C--CHHHHHHHHHHCCCeeEEeCCCeEEEEeCCCCCHHHHHHHHHHhc
Confidence 0 135677888899998887655556555 4678999999999883
No 387
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=97.74 E-value=0.01 Score=56.46 Aligned_cols=322 Identities=17% Similarity=0.121 Sum_probs=154.9
Q ss_pred CcHHHHHHHHHHHHhcC-------CCCCCCHHHHHHHHHHH-----hhCC-CCCe--EE-EeCCHHHHHHHHHHHHHhcc
Q 011856 116 ADDQVLAALGETMKKGT-------SFGAPCLLENVLAEMVI-----SAVP-SIEM--VR-FVNSGTEACMGVLRLARAFT 179 (476)
Q Consensus 116 ~~p~v~~a~~~~l~~~~-------~~~~~~~~~~~la~~l~-----~~~~-~~e~--v~-~~~sGseA~~~al~~ar~~~ 179 (476)
.+..|.+|+-..+.+-. .|++-++...++ |.|+ +.+. +++. |- -.-||+-||.++-.. ...
T Consensus 52 ts~aVmeAlGS~ltNKYSEGyPG~RYYGGne~ID~i-E~LCq~RALeaF~ldp~kWGVNVQp~SGSPANfavYta--ll~ 128 (477)
T KOG2467|consen 52 TSRAVMEALGSCLTNKYSEGYPGARYYGGNEYIDQI-ELLCQKRALEAFGLDPEKWGVNVQPYSGSPANFAVYTA--LLK 128 (477)
T ss_pred hHHHHHHHHhHHhhcccccCCCcccccCcchHHHHH-HHHHHHHHHHHhCCCHHHCceeeccCCCCchhhHHHhh--hcC
Confidence 46788888888887622 222233333222 2222 3343 3322 22 234799999888773 234
Q ss_pred CCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCC
Q 011856 180 GRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNS 259 (476)
Q Consensus 180 ~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~ 259 (476)
+.++|.-.+-.--|+........+..+-. ..-.+..+|......+=. -|.|.||+..... +.+++|+-..- -
T Consensus 129 Ph~RiMGLDLP~GGHLsHGy~T~~kkISa-~SiyFeSmPYkv~~~TG~---IDYD~Le~~A~~f--rPk~iiaG~Sa--Y 200 (477)
T KOG2467|consen 129 PHERIMGLDLPSGGHLSHGYQTPTKKISA-TSIYFESMPYKVDPSTGY---IDYDKLEKTATLF--RPKLIIAGTSA--Y 200 (477)
T ss_pred CCCeeeeccCCCCCccccccccCCceeee-eeeecccCceeeCCCCCc---eehHHHHHHHHhc--CCcEEEecccc--c
Confidence 66777776543323211111111111000 000111111111111111 1677887766544 44555553211 1
Q ss_pred CcccCCHHHHHHHHHHHHHhCCEEEEeccc-cCc-cccc-cchhhccCCCCchh--hhhhhcCCCCcEEEEEecHHH---
Q 011856 260 GFIAPKPDFLNAIRRITKENGALLIFDEVM-TGF-RLAY-GGAQEYFGVTPDLT--TLGKIIGGGLPVGAYGGRRDI--- 331 (476)
Q Consensus 260 G~i~~~~~~l~~l~~l~~~~g~llI~DEv~-~g~-r~g~-~~~~~~~g~~pDi~--t~sK~lg~G~~iG~~~~~~~i--- 331 (476)
-..+. ..+++++|++.|++|++|=+| +|+ -.+. ...+++ .||+ |.-|++-| -|.|-+.-++-+
T Consensus 201 ~R~~D----YaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFey----~DiVTTTTHKsLRG-PRg~mIFyRkGvk~~ 271 (477)
T KOG2467|consen 201 SRLID----YARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFEY----CDIVTTTTHKSLRG-PRGAMIFYRKGVKSI 271 (477)
T ss_pred hhhcc----HHHHHHHHHhcCceeehhhhhHHHHHhcccCCCcccc----cceeeccccccccC-CcceeEEEeccCCcC
Confidence 11223 789999999999999999999 777 4332 223343 3666 45688874 344444434321
Q ss_pred ------------HHhhcC-CCCccccCCCCCcHHHHHHHHHHHHHhcCC---CHHHHHHHHHHHHHHHHHHHhhhcCCce
Q 011856 332 ------------MEMVAP-AGPMYQAGTLSGNPLAMTAGIHTLKRLKEP---GTYEYLNKITGELTQGIIDAGKKAGHAI 395 (476)
Q Consensus 332 ------------~~~l~~-~~~~~~~~t~~~~~~~~aaa~aal~~~~~~---~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 395 (476)
-+.+.. .-+..+++..+-...+.| .+|+....+ .+.+++.++.+.|.+.|.+.+.+. ..
T Consensus 272 ~~k~g~~i~ydlE~kINfaVFP~lQGGPHNhtIaalA---vALkQa~tpefk~Yq~qV~~Nakala~~l~~~Gy~l--vt 346 (477)
T KOG2467|consen 272 KPKQGKEILYDLEDKINFAVFPGLQGGPHNHTIAALA---VALKQAMTPEFKEYQKQVLKNAKALASALISRGYKL--VT 346 (477)
T ss_pred CCCCCCcceechhhhhhhhccccccCCCCcchHHHHH---HHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHcCceE--ec
Confidence 111111 123445555443222222 345444443 456777788888888888764332 10
Q ss_pred EeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHH---HHCCeEeccC---CCcceEE------eCCCcHHHHHHH
Q 011856 396 CGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGM---LEEGVYFAPS---QFEAGFT------SLAHSSDDIQHT 463 (476)
Q Consensus 396 ~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~Gv~~~~~---~~~~~~~------~~~~t~e~i~~~ 463 (476)
. ...-.++.+++....+ +....+.+.+.+ +.+.-..... .+..+|+ +-...++|.++.
T Consensus 347 g-GTDnHlvLvDLr~~G~---------dGarvE~vle~~~I~~NKNtvpGD~Sal~PgGiRiGtPAmTsRG~~e~df~~v 416 (477)
T KOG2467|consen 347 G-GTDNHLVLVDLRPKGV---------DGARVEKVLELCHIALNKNTVPGDKSALSPGGIRIGTPAMTSRGFGEEDFEKV 416 (477)
T ss_pred C-CccceEEEEeccccCC---------chHHHHHHHHHhhhhhcCCcCCCCccccCCCceeccchhhcccCccHHHHHHH
Confidence 0 1123355666643211 223333333332 2222111100 1223565 224468888888
Q ss_pred HHHHHHHHH
Q 011856 464 ITAAEKVKM 472 (476)
Q Consensus 464 ~~~l~~~~~ 472 (476)
.+-|.++++
T Consensus 417 ~~fi~~av~ 425 (477)
T KOG2467|consen 417 ADFIDRAVK 425 (477)
T ss_pred HHHHHHHHH
Confidence 888877654
No 388
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=97.67 E-value=0.0005 Score=64.53 Aligned_cols=207 Identities=19% Similarity=0.166 Sum_probs=110.7
Q ss_pred CeEEEeecCCEEEEcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcC-CCCCCCHHHHHHHHHHHhhC-----C--
Q 011856 82 PIVFDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGT-SFGAPCLLENVLAEMVISAV-----P-- 153 (476)
Q Consensus 82 p~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~-~~~~~~~~~~~la~~l~~~~-----~-- 153 (476)
|.-+.=|-|.|- |.+|+.|+ -|.|++|=.+.+.... --+.|-....++.+.-+++. |
T Consensus 52 ~~KiNLgvGaYR-dd~gKp~v--------------L~~VrkAE~ql~~~~ldKEYlpI~Gl~eF~k~sakLa~G~~s~~i 116 (427)
T KOG1411|consen 52 PKKINLGVGAYR-DDNGKPYV--------------LPSVRKAEQQLASLSLDKEYLPITGLAEFNKLSAKLALGDNSPVI 116 (427)
T ss_pred cceeeeccccee-cCCCCeee--------------eHHHHHHHHHHhhhcccchhccccchHHHHHHHHHHhhcCCchhh
Confidence 556667788864 45666653 2556665443333211 11122222233333333322 1
Q ss_pred CCCeEEE--eCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCC
Q 011856 154 SIEMVRF--VNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFN 231 (476)
Q Consensus 154 ~~e~v~~--~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (476)
..+++.. +-|||-|+..+-.....+-...+|.+.++++-.+. ......|. .+..+.|-
T Consensus 117 k~~Ri~tvQ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh~-~if~~ag~-------------------~~~~yrYy 176 (427)
T KOG1411|consen 117 KEKRIVTVQTLSGTGALRVGAEFLARFYPSRDIYIPDPTWGNHK-NIFKDAGL-------------------PVKFYRYY 176 (427)
T ss_pred hccceeEEEeccCcchhhHHHHHHHhhccccceeecCCcccccC-ccccccCc-------------------ceeeeeec
Confidence 1234443 56888888877765444555666777777653321 11111111 12122211
Q ss_pred -------CHHHHHHHHhcCCCCeEEEEE-cccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCcccccc----ch
Q 011856 232 -------DVSALENLFENNKGEIAAIIL-EPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYG----GA 299 (476)
Q Consensus 232 -------d~~~le~~l~~~~~~~a~vi~-ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~----~~ 299 (476)
|.+.+-+-+.+.++.- .|++ ..-++++| +.|..+-+++|+++.++.+.+-++|-+|-||-.|.. ++
T Consensus 177 d~~t~gld~~g~ledl~~~p~gs-~ilLhaCaHNPTG-vDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~a 254 (427)
T KOG1411|consen 177 DPKTRGLDFKGMLEDLGEAPEGS-IILLHACAHNPTG-VDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQA 254 (427)
T ss_pred cccccccchHHHHHHHhcCCCCc-EEEeehhhcCCCC-CCccHHHHHHHHHHhhhccccchhhhhhcccccCCchhhHHH
Confidence 5555555555544332 3444 33344444 677888899999999999999999999999943321 12
Q ss_pred hhcc-CCCCchh---hhhhhcC-CCCcEEEE
Q 011856 300 QEYF-GVTPDLT---TLGKIIG-GGLPVGAY 325 (476)
Q Consensus 300 ~~~~-g~~pDi~---t~sK~lg-~G~~iG~~ 325 (476)
..+| ...-++. +++|-+| =|=|+|++
T Consensus 255 vR~F~~~g~~~~laQSyAKNMGLYgERvGa~ 285 (427)
T KOG1411|consen 255 VRLFVEDGHEILLAQSYAKNMGLYGERVGAL 285 (427)
T ss_pred HHHHHHcCCceEeehhhhhhcchhhhcccee
Confidence 2122 1111222 6889998 47788887
No 389
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=97.60 E-value=0.011 Score=54.75 Aligned_cols=201 Identities=20% Similarity=0.240 Sum_probs=114.3
Q ss_pred CcHHHHHHHHHHHHh------cCCCCCCCHHHHHHHHHHHhhCCCCCeEEE---eCCHHHHHHHHHHHHHhccCCceEEE
Q 011856 116 ADDQVLAALGETMKK------GTSFGAPCLLENVLAEMVISAVPSIEMVRF---VNSGTEACMGVLRLARAFTGRERIIK 186 (476)
Q Consensus 116 ~~p~v~~a~~~~l~~------~~~~~~~~~~~~~la~~l~~~~~~~e~v~~---~~sGseA~~~al~~ar~~~~~~~ii~ 186 (476)
|..+|.+|.++.--. .+.||+.+..+..|.+-+++.+. .|..++ .-|||.|+..|+.- .+.+++..+.
T Consensus 36 Nq~kVL~AF~~~rvs~~hf~~stGYGydD~GRdtLe~vyA~vf~-aE~a~VRpq~isGTHAI~~aLfg--~LRpgDell~ 112 (416)
T COG4100 36 NQKKVLEAFRHHRVSESHFTGSTGYGYDDLGRDTLERVYAQVFG-AEAALVRPQIISGTHAIACALFG--ILRPGDELLY 112 (416)
T ss_pred HHHHHHHHHHhcccchhccCCCCCCCccccchhHHHHHHHHHhc-cccceeeeeeecchhHHHHHHHh--ccCCCCeEEE
Confidence 445677776653211 13456666677888888888884 443332 24699999999973 3456677776
Q ss_pred EeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccC-----CCHHHHHHHHhcCCCCeEEEEEcccCCCCCc
Q 011856 187 FEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPF-----NDVSALENLFENNKGEIAAIILEPVVGNSGF 261 (476)
Q Consensus 187 ~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~ 261 (476)
..+.-.-.....+-..|.+.-. +. ..++ ....+|. -|.+.++..++. ++++|.+--.-+-.-.
T Consensus 113 i~G~PYDTLeevIG~rg~~~gS--L~-dfgi------~Y~~v~Lt~~gkiD~~~v~~~i~~---~tkli~IQRS~GY~~R 180 (416)
T COG4100 113 ITGSPYDTLEEVIGLRGEGQGS--LK-DFGI------KYKAVPLTADGKIDIQAVKTAISD---RTKLIGIQRSKGYAWR 180 (416)
T ss_pred ecCCcchhHHHHhccCCCCccc--HH-HhCc------ceeecccccCCcccHHHHHHhcCc---cceEEEEEeccCcCCC
Confidence 6553222122222222211100 00 0010 0111111 178888888873 6888877554332211
Q ss_pred ccCCHHHHHHHHHHHHHh--CCEEEEeccccCc-cccccchhhccCCCCchh--hhhhhcCCCC--cEEEEEecHHHHHh
Q 011856 262 IAPKPDFLNAIRRITKEN--GALLIFDEVMTGF-RLAYGGAQEYFGVTPDLT--TLGKIIGGGL--PVGAYGGRRDIMEM 334 (476)
Q Consensus 262 i~~~~~~l~~l~~l~~~~--g~llI~DEv~~g~-r~g~~~~~~~~g~~pDi~--t~sK~lg~G~--~iG~~~~~~~i~~~ 334 (476)
-..+-..++++.++.++- ++++.+|..|..| -. .+...+-.|++ +|=|--|||+ -.||+.+++++++.
T Consensus 181 pS~~I~eI~~~i~~vk~inpn~ivFVDNCYGEFvE~-----~EPt~vGaDliAGSLIKNpGGgiaktGGYiaGk~~~ve~ 255 (416)
T COG4100 181 PSLSIAEIEEMITFVKEINPNVIVFVDNCYGEFVEE-----KEPTHVGADLIAGSLIKNPGGGIAKTGGYIAGKAELVEA 255 (416)
T ss_pred CcccHHHHHHHHHHHHhcCCCEEEEEeccchhhhhc-----cCccccchhhhccceeeCCCCceeeccceeechHHHHHh
Confidence 111222366666666664 6889999999877 22 13334556877 6779999886 46777999999887
Q ss_pred hc
Q 011856 335 VA 336 (476)
Q Consensus 335 l~ 336 (476)
..
T Consensus 256 ~~ 257 (416)
T COG4100 256 AA 257 (416)
T ss_pred hc
Confidence 54
No 390
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=97.03 E-value=0.34 Score=46.59 Aligned_cols=198 Identities=19% Similarity=0.098 Sum_probs=107.8
Q ss_pred eEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCccccccchhhccCC-CCchhhhh--hhcC-CCCcE
Q 011856 247 IAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGV-TPDLTTLG--KIIG-GGLPV 322 (476)
Q Consensus 247 ~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~-~pDi~t~s--K~lg-~G~~i 322 (476)
.+-|...++....|+-.++.. .+... .++|+|-.-. + ++ ...++ .-|++.+| |.+| .| +
T Consensus 145 ~ayv~~~~NeTi~Gv~v~~~p------~~~~~--~~~v~D~SS~-i-----ls-r~iDvsk~dviyagaQKnlGpaG--l 207 (365)
T COG1932 145 DAYVHFCWNETISGVEVPELP------DIGSD--GLLVADASSA-I-----LS-RPIDVSKYDVIYAGAQKNLGPAG--L 207 (365)
T ss_pred ccEEEEecCCcccceEccCCC------CCCCC--ceEEEecccH-H-----hc-CCCChhHcceEEEehhhccCccc--e
Confidence 444666776666777665322 11112 7888884332 1 11 11122 12566554 9999 47 8
Q ss_pred EEEEecHHHHHhhcCC-CC--------ccccCCCCCcHHHH-HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhcC
Q 011856 323 GAYGGRRDIMEMVAPA-GP--------MYQAGTLSGNPLAM-TAGIHTLKRLKEPGTYEYLNKITGELTQGIIDAGKKAG 392 (476)
Q Consensus 323 G~~~~~~~i~~~l~~~-~~--------~~~~~t~~~~~~~~-aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 392 (476)
+.++.++++++.+... -+ ....++|+.+|..+ ....-+++.+....-++.+.++.+.-.+.|-+..++.+
T Consensus 208 tvvIvr~~~l~r~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s~ 287 (365)
T COG1932 208 TVVIVRPDLLERAESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKSD 287 (365)
T ss_pred EEEEEcHHHHhcccccCCchHhhchhhhccCCccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 8899999998887542 11 22356666555433 34445667676643333333333333333433333333
Q ss_pred Cce---EeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCC--CcceEEe--CCCcHHHHHHHHH
Q 011856 393 HAI---CGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQ--FEAGFTS--LAHSSDDIQHTIT 465 (476)
Q Consensus 393 ~~~---~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~--~~~~~~~--~~~t~e~i~~~~~ 465 (476)
+.. .-..+..| -+.|. ..+.+....|...+.++|+..-.+. .+.+|.+ -+...|+++.+++
T Consensus 288 fy~~~v~~~~RS~m-nV~f~-----------~~~~~ld~~fv~eae~~gl~~lkGhr~vgGmRasiynA~~~e~veaL~~ 355 (365)
T COG1932 288 FYRNLVAKANRSRM-NVTFT-----------LVDAELDKGFVAEAEAAGLIYLKGHRSVGGLRASIYNAVPLEDVEALTD 355 (365)
T ss_pred ccccccchhhccce-eEEEE-----------cCcHHHHHHHHHHHHHcCCceeccccCCCceeeeeecCCCHHHHHHHHH
Confidence 211 11222333 22221 1234455778888888888765442 2235654 5678999999999
Q ss_pred HHHHHHHH
Q 011856 466 AAEKVKMR 473 (476)
Q Consensus 466 ~l~~~~~~ 473 (476)
-++++.++
T Consensus 356 fm~~f~~~ 363 (365)
T COG1932 356 FMDWFEET 363 (365)
T ss_pred HHHHHHHh
Confidence 99887654
No 391
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=96.89 E-value=0.15 Score=50.29 Aligned_cols=117 Identities=20% Similarity=0.247 Sum_probs=66.5
Q ss_pred EEEeCCHHHHHHHHHHHHHhc-----cCC-----------ceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCC
Q 011856 158 VRFVNSGTEACMGVLRLARAF-----TGR-----------ERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGA 221 (476)
Q Consensus 158 v~~~~sGseA~~~al~~ar~~-----~~~-----------~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 221 (476)
-++-.|++|++..++..||.- ..+ +-|+.+..--|.+..-+....+.+...++.....++
T Consensus 142 GviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~Y~SDqahssveka~~i~~VklR~l~td~n~~m---- 217 (511)
T KOG0628|consen 142 GVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLARLVAYCSDQAHSSVEKACLIAGVKLRALPTDENFGM---- 217 (511)
T ss_pred ceEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhheEEecCcccchHHHhHhhcceeEEEeecccCcCC----
Confidence 345567899999999887643 111 224444444454444333333332111111111111
Q ss_pred CCceeeccCCCHHHHHHHHhcC--CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccC
Q 011856 222 TYETLTAPFNDVSALENLFENN--KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTG 291 (476)
Q Consensus 222 ~~~~~~~~~~d~~~le~~l~~~--~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g 291 (476)
+.+.|++++++. .+-+..++ ..+.|++|...- +.|.+|..+|+++|++|.+|-+|.|
T Consensus 218 ----------r~~~L~~AIe~D~arGlIPf~v-~at~GTT~~ca~--D~l~elg~Vc~~~glWLHVDAAYAG 276 (511)
T KOG0628|consen 218 ----------RGDTLRKAIEEDIARGLIPFFV-CATLGTTSSCAF--DELEELGPVCREEGLWLHVDAAYAG 276 (511)
T ss_pred ----------CHHHHHHHHHHHHhCCCccEEE-EEeecCcccccc--ccHHHhcchhhhcCEEEEeehhhcc
Confidence 578888888752 12234444 444455554332 2299999999999999999999975
No 392
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=96.24 E-value=0.03 Score=47.90 Aligned_cols=73 Identities=8% Similarity=0.087 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCC-----CCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCC
Q 011856 118 DQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVP-----SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYH 192 (476)
Q Consensus 118 p~v~~a~~~~l~~~~~~~~~~~~~~~la~~l~~~~~-----~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yh 192 (476)
+.+++++.+. .....+.+..++++++++++.+.++ .+++|++++|+++|++.+++. ....++.|++.++.|.
T Consensus 76 ~~i~~~~~~~-a~Y~~~~G~~~lR~AiA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l~~~--l~dpGD~VlVp~P~Y~ 152 (153)
T PLN02994 76 EGTIDSFKDI-ALFQDYHGLANFRKAIANFMAEARGGRVKFDADMIVLSAGATAANEIIMFC--IADPGDAFLVPTPYYA 152 (153)
T ss_pred HHHHHHHHHH-hcCCCCCCcHHHHHHHHHHHHHHhCCCCccchhheEEcCCHHHHHHHHHHH--HcCCCCEEEEeCCCCC
Confidence 4445555552 2222334567889999999988643 468999999999999999984 2345677888888886
Q ss_pred C
Q 011856 193 G 193 (476)
Q Consensus 193 g 193 (476)
|
T Consensus 153 ~ 153 (153)
T PLN02994 153 A 153 (153)
T ss_pred C
Confidence 5
No 393
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=95.25 E-value=1.4 Score=40.45 Aligned_cols=99 Identities=24% Similarity=0.246 Sum_probs=57.4
Q ss_pred CHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc-cccc--cchhh-ccCCCC
Q 011856 232 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF-RLAY--GGAQE-YFGVTP 307 (476)
Q Consensus 232 d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~-r~g~--~~~~~-~~g~~p 307 (476)
|++++++.+++.+++-...|.... .-..+-.++-+++|..+|..|+++-|+..+| |+ .... ..+.. ..| ..
T Consensus 142 dleav~~~iee~g~dcilci~stt---scfapr~pd~leaiaaica~~diphivnnay-glqsee~i~~iaa~~~~g-ri 216 (432)
T KOG3843|consen 142 DLEAVEAIIEELGEDCILCIHSTT---SCFAPRSPDNLEAIAAICAAHDIPHIVNNAY-GLQSEECIHKIAAAAECG-RI 216 (432)
T ss_pred hHHHHHHHHHHhCCceEEEEeecc---cccCCCCCchHHHHHHHHHccCchhhhcccc-ccchHHHHHHHHHHhhhc-cH
Confidence 789999999876555222222111 1222344556999999999999999999998 44 2111 11111 122 23
Q ss_pred chh--hhhhhcCCCCcEEEE-E--ecHHHHHhhcC
Q 011856 308 DLT--TLGKIIGGGLPVGAY-G--GRRDIMEMVAP 337 (476)
Q Consensus 308 Di~--t~sK~lg~G~~iG~~-~--~~~~i~~~l~~ 337 (476)
|.+ ++-|.|-- |+|.. + .+...++.+.+
T Consensus 217 da~vqsldknf~v--pvggaiia~fk~n~iq~iak 249 (432)
T KOG3843|consen 217 DAFVQSLDKNFMV--PVGGAIIAAFKDNFIQEIAK 249 (432)
T ss_pred HHHHHHhhhccee--ecchhHhhHhHHHHHHHHHH
Confidence 433 67787752 45443 2 25566666653
No 394
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=86.21 E-value=48 Score=34.92 Aligned_cols=109 Identities=11% Similarity=0.284 Sum_probs=60.0
Q ss_pred HHhhCC-CCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCcee
Q 011856 148 VISAVP-SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETL 226 (476)
Q Consensus 148 l~~~~~-~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 226 (476)
++++.+ +..+.-+..-||.|-++..... ...++++ ++.+...|..+...+.....+ .++ .
T Consensus 172 i~dlTGL~~aNASLLDEgTAaaEAm~l~~-~~~krkk-~vvd~~~hpqtlsV~~TRa~~---------~~i------~-- 232 (1001)
T KOG2040|consen 172 ITDLTGLPMANASLLDEGTAAAEAMALCN-RINKRKK-FVVDSNCHPQTLSVVKTRAKG---------FGI------K-- 232 (1001)
T ss_pred hhhccCCcccchhhhccchhHHHHHHHHH-hhcccce-EEecCCCCcchhhhhhccccc---------cce------e--
Confidence 344443 3344555556777776655543 3345555 556677777666554332210 111 1
Q ss_pred eccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 011856 227 TAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 285 (476)
Q Consensus 227 ~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~ 285 (476)
+...|++..... .+++..+++--. ...|.+.+ ..++.++++++|.++++
T Consensus 233 -v~~~~~~~~~~s----~~~v~gvlvQYP-~t~G~i~d----~~el~~~a~~~~s~vv~ 281 (1001)
T KOG2040|consen 233 -VVVSDIKEADYS----SKDVSGVLVQYP-DTEGSVLD----FDELVELAHANGSLVVM 281 (1001)
T ss_pred -EEecCHHHhhcc----ccceeEEEEEcC-CCCCcccC----HHHHHHHhhccCceEEE
Confidence 111133332221 236777777543 34677888 88899999999988764
No 395
>PF12138 Spherulin4: Spherulation-specific family 4; InterPro: IPR021986 This protein is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 250 and 398 amino acids in length. There is a conserved NPG sequence motif and there are two completely conserved G residues that may be functionally important. Starvation will often induce spherulation - the production of spores - and this process may involve DNA-methylation. Changes in the methylation of spherulin4 are associated with the formation of spherules, but these changes are probably transient. Methylation of the gene accompanies its transcriptional activation, and spherulin4 mRNA is only detectable in late spherulating cultures and mature spherules. It is a spherulation-specific protein.
Probab=69.02 E-value=20 Score=33.49 Aligned_cols=52 Identities=15% Similarity=0.238 Sum_probs=42.3
Q ss_pred HHHHHHHHhcCCCCeEEEEEcccCCCCCc--ccCCHHHHHHHHHHHHHhCCEEE
Q 011856 233 VSALENLFENNKGEIAAIILEPVVGNSGF--IAPKPDFLNAIRRITKENGALLI 284 (476)
Q Consensus 233 ~~~le~~l~~~~~~~a~vi~ep~~~~~G~--i~~~~~~l~~l~~l~~~~g~llI 284 (476)
.+.|.+++..++...-.+|++|.+|+|.. -.|...|...|.+|-+.-|+.+|
T Consensus 18 W~~l~~a~~~~p~~~f~vIiNP~sGPG~~~~~~pd~~Y~~~i~~L~~~~nv~vl 71 (253)
T PF12138_consen 18 WDPLYDAIAAHPSVPFTVIINPNSGPGSAPDPWPDANYAAAIPRLNSYANVRVL 71 (253)
T ss_pred hHHHHHHHhcCCCCcEEEEEcCCCCCCCCCCCCCCHHHHHHHHHHHhcCCCcEE
Confidence 67788888888777788999999998743 45899999999999777777666
No 396
>PLN02672 methionine S-methyltransferase
Probab=65.29 E-value=85 Score=35.84 Aligned_cols=132 Identities=16% Similarity=0.106 Sum_probs=69.9
Q ss_pred HHHHHHHHHHHhhCC---CCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhH--HhhcCCCCccCCCCC
Q 011856 139 LLENVLAEMVISAVP---SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPF--LVKAGSGVATLGLPD 213 (476)
Q Consensus 139 ~~~~~la~~l~~~~~---~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~--~~~~g~~~~~~~~~~ 213 (476)
..+.-++..+..++. ..++|++.+|-..|++.++++ +..+--++--.-+-|-.-.+. +...+.... .
T Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~- 501 (1082)
T PLN02672 430 RFRNLIAGFMRIYHHIPLTPDNVVVFPSRAVAIENALRL---FSPRLAIVDEHLTRWLPKKWLTSLAIENATSD----S- 501 (1082)
T ss_pred HHHHHHHHHHHHhcCCcCCccceEEeccHHHHHHHHHHh---hChHHHhhhhhhhccCCHHHHhHhhhhccccc----C-
Confidence 344455555555543 689999999999999999994 433311111000111111111 111121100 0
Q ss_pred CCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccc
Q 011856 214 SPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM 289 (476)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~ 289 (476)
+......++..|.. -+.+.+++++- +...|++---+.+ ...+.. ++.|.+.+++-|+.|+.|+.-
T Consensus 502 ----~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 566 (1082)
T PLN02672 502 ----KSDDVITVIEAPRQ-SDLVIELIKKL--KPQVVVTGMADFE---MRTSTA-FEHLLNVTAEIGARLFLDISD 566 (1082)
T ss_pred ----ccCCeEEEEeCCCc-chHHHHHHHhC--CCeEEEEeccchh---hhhHHH-HHHHHHHHHhhCcEEEEehhh
Confidence 01112235555554 34566777754 3444554333322 222223 888999999999999999754
No 397
>COG2515 Acd 1-aminocyclopropane-1-carboxylate deaminase [Amino acid transport and metabolism]
Probab=62.85 E-value=1.2e+02 Score=29.09 Aligned_cols=34 Identities=29% Similarity=0.541 Sum_probs=26.8
Q ss_pred CCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccC
Q 011856 256 VGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTG 291 (476)
Q Consensus 256 ~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g 291 (476)
+.-+|.=.|.+|.++.+..+++..|++ .|=||+|
T Consensus 251 y~~~~Yg~p~~e~~e~i~~~~~~eGil--lDpVYtg 284 (323)
T COG2515 251 YHHPGYGKPNEEDIEAIKLLARLEGIL--LDPVYTG 284 (323)
T ss_pred ccCCccCCcCHHHHHHHHHHHHhhCcc--cccccch
Confidence 333455567888899999999999975 6999986
No 398
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=57.41 E-value=28 Score=33.42 Aligned_cols=53 Identities=17% Similarity=0.223 Sum_probs=34.3
Q ss_pred HHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccc
Q 011856 233 VSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM 289 (476)
Q Consensus 233 ~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~ 289 (476)
++.+.+.+++.-....+|++....+.+ -+++|+.+|.++|+++|+.+++|-.-
T Consensus 116 ~~~~l~~~~~~l~~~d~VvlsGSlP~g----~~~d~y~~li~~~~~~g~~vilD~Sg 168 (310)
T COG1105 116 LEQFLEQLKALLESDDIVVLSGSLPPG----VPPDAYAELIRILRQQGAKVILDTSG 168 (310)
T ss_pred HHHHHHHHHHhcccCCEEEEeCCCCCC----CCHHHHHHHHHHHHhcCCeEEEECCh
Confidence 444444444311233346666554443 35678999999999999999999544
No 399
>cd01393 recA_like RecA is a bacterial enzyme which has roles in homologous recombination, DNA repair, and the induction of the SOS response. RecA couples ATP hydrolysis to DNA strand exchange. While prokaryotes have a single RecA protein, eukaryotes have multiple RecA homologs such as Rad51, DMC1 and Rad55/57. Archaea have the RecA-like homologs radA and radB.
Probab=56.52 E-value=77 Score=28.60 Aligned_cols=61 Identities=11% Similarity=0.147 Sum_probs=34.6
Q ss_pred eeeccCCCHHHHHHHHhcC-----CCCeEEEEEcccCCCCC-cccC----------CHHHHHHHHHHHHHhCCEEEE
Q 011856 225 TLTAPFNDVSALENLFENN-----KGEIAAIILEPVVGNSG-FIAP----------KPDFLNAIRRITKENGALLIF 285 (476)
Q Consensus 225 ~~~~~~~d~~~le~~l~~~-----~~~~a~vi~ep~~~~~G-~i~~----------~~~~l~~l~~l~~~~g~llI~ 285 (476)
+..+...+.+++...+.+. ...+..|+++++..--. .... -.+++..|..+|+++++.+|+
T Consensus 88 i~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvVIDsis~l~~~~~~~~~~~~~~~~~l~~~~~~L~~~a~~~~~~vi~ 164 (226)
T cd01393 88 IYVARPYNGEQQLEIVEELERIMSSGRVDLVVVDSVAALFRKEFIGRGMLAERARLLSQALRKLLRLADKFNVAVVF 164 (226)
T ss_pred EEEEeCCCHHHHHHHHHHHHHHhhcCCeeEEEEcCcchhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHHhCcEEEE
Confidence 3444444555555444321 23678999999764210 0011 123456789999999987664
No 400
>PF13481 AAA_25: AAA domain; PDB: 1G8Y_J 1OLO_A 1NLF_C.
Probab=54.17 E-value=27 Score=30.72 Aligned_cols=53 Identities=19% Similarity=0.397 Sum_probs=31.6
Q ss_pred CHHHHHHHHhcCCCCeEEEEEcccCCCC-CcccCC---HHHHHHHHHHHHHhCCEEEE
Q 011856 232 DVSALENLFENNKGEIAAIILEPVVGNS-GFIAPK---PDFLNAIRRITKENGALLIF 285 (476)
Q Consensus 232 d~~~le~~l~~~~~~~a~vi~ep~~~~~-G~i~~~---~~~l~~l~~l~~~~g~llI~ 285 (476)
+++.+++.+.+.. +..+||+++...-. +..... ..+++.|.++|+++|+.+|+
T Consensus 128 ~~~~l~~~~~~~~-~~~lvviD~l~~~~~~~~~~~~~~~~~~~~l~~la~~~~~~vi~ 184 (193)
T PF13481_consen 128 DLEELEAALKELY-GPDLVVIDPLQSLHDGDENSNSAVAQLMQELKRLAKEYGVAVIL 184 (193)
T ss_dssp HHHHHHHHHTT-----SEEEEE-GGGG--S-TT-HHHHHHHHHHHHHHHHHH--EEEE
T ss_pred HHHHHHHHHhhcC-CCcEEEEcCHHHHhcCCCCCHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 3667778777621 47899999987642 222211 35899999999999987664
No 401
>PF03652 UPF0081: Uncharacterised protein family (UPF0081); InterPro: IPR005227 Holliday junction resolvases (HJRs) are key enzymes of DNA recombination. The principal HJRs are now known or confidently predicted for all bacteria and archaea whose genomes have been completely sequenced, with many species encoding multiple potential HJRs. Structural and evolutionary relationships of HJRs and related nucleases suggests that the HJR function has evolved independently from at least four distinct structural folds, namely RNase H, endonuclease, endonuclease VII-colicin E and RusA (IPR008822 from INTERPRO): The endonuclease fold, whose structural prototypes are the phage exonuclease, the very short patch repair nuclease (Vsr) and type II restriction enzymes, is shown to encompass by far a greater diversity of nucleases than previously suspected. This fold unifies archaeal HJRs (IPR002732 from INTERPRO), repair nucleases such as RecB (IPR004586 from INTERPRO) and Vsr (IPR004603 from INTERPRO), restriction enzymes and a variety of predicted nucleases whose specific activities remain to be determined. The RNase H fold characterises the RuvC family (IPR002176 from INTERPRO), which is nearly ubiquitous in bacteria, and in addition the YqgF family (IPR005227 from INTERPRO). The proteins of this family, typified by Escherichia coli YqgF, are likely to function as an alternative to RuvC in most bacteria, but could be the principal HJRs in low-GC Gram-positive bacteria and Aquifex. Endonuclease VII of phage T4 (IPR004211 from INTERPRO) is shown to serve as a structural template for many nucleases, including McrA and other type II restriction enzymes. Together with colicin E7, endonuclease VII defines a distinct metal-dependent nuclease fold. Horizontal gene transfer, lineage-specific gene loss and gene family expansion, and non-orthologous gene displacement seem to have been major forces in the evolution of HJRs and related nucleases. A remarkable case of displacement is seen in the Lyme disease spirochete Borrelia burgdorferi, which does not possess any of the typical HJRs, but instead encodes, in its chromosome and each of the linear plasmids, members of the exonuclease family predicted to function as HJRs. The diversity of HJRs and related nucleases in bacteria and archaea contrasts with their near absence in eukaryotes. The few detected eukaryotic representatives of the endonuclease fold and the RNase H fold have probably been acquired from bacteria via horizontal gene transfer. The identity of the principal HJR(s) involved in recombination in eukaryotes remains uncertain; this function could be performed by topoisomerase IB or by a novel, so far undetected, class of enzymes. Likely HJRs and related nucleases were identified in the genomes of numerous bacterial and eukaryotic DNA viruses. Gene flow between viral and cellular genomes has probably played a major role in the evolution of this class of enzymes. This family represents the YqgF family of putative Holliday junction resolvases. With the exception of the spirochetes, the YqgF family is represented in all bacterial lineages, including the mycoplasmas with their highly degenerate genomes. The RuvC resolvases are conspicuously absent in the low-GC Gram-positive bacterial lineage, with the exception of Ureaplasma parvum (Ureaplasma urealyticum biotype 1) (Q9PQY7 from SWISSPROT, []). Furthermore, loss of function ruvC mutants of E. coli show a residual HJR activity that cannot be ascribed to the prophage-encoded RusA resolvase []. This suggests that the YqgF family proteins could be alternative HJRs whose function partially overlaps with that of RuvC [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006281 DNA repair, 0006310 DNA recombination, 0006974 response to DNA damage stimulus, 0005737 cytoplasm; PDB: 1NU0_A 1OVQ_A 1NMN_B 1VHX_B 1IV0_A.
Probab=53.45 E-value=65 Score=26.77 Aligned_cols=56 Identities=25% Similarity=0.412 Sum_probs=36.3
Q ss_pred CHHHHHHHHhcCCCCeEEEEE-cccCCCCCcccCCHHHHHHHHH-HHHHh-CCEEE-Eecccc
Q 011856 232 DVSALENLFENNKGEIAAIIL-EPVVGNSGFIAPKPDFLNAIRR-ITKEN-GALLI-FDEVMT 290 (476)
Q Consensus 232 d~~~le~~l~~~~~~~a~vi~-ep~~~~~G~i~~~~~~l~~l~~-l~~~~-g~llI-~DEv~~ 290 (476)
+++.|.++++++ .+..+++ .|. ++.|...+.....++..+ |.+++ ++.++ +||-+|
T Consensus 39 ~~~~l~~li~~~--~i~~iVvGlP~-~~~G~~~~~~~~v~~f~~~L~~~~~~ipV~~~DEr~T 98 (135)
T PF03652_consen 39 DIEELKKLIEEY--QIDGIVVGLPL-NMDGSESEQARRVRKFAEELKKRFPGIPVILVDERLT 98 (135)
T ss_dssp CHHHHHHHHHHC--CECEEEEEEEB-BCTSSC-CCHHHHHHHHHHHHHHH-TSEEEEEECSCS
T ss_pred HHHHHHHHHHHh--CCCEEEEeCCc-ccCCCccHHHHHHHHHHHHHHHhcCCCcEEEECCChh
Confidence 799999999986 5666666 554 445665555554555444 44444 88654 899886
No 402
>PRK03892 ribonuclease P protein component 3; Provisional
Probab=50.05 E-value=1.9e+02 Score=25.95 Aligned_cols=74 Identities=19% Similarity=0.225 Sum_probs=47.2
Q ss_pred HHHHHHHHhcCCCCeEE-EEEcccC-CCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCccccccchhhccCCCC--c
Q 011856 233 VSALENLFENNKGEIAA-IILEPVV-GNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTP--D 308 (476)
Q Consensus 233 ~~~le~~l~~~~~~~a~-vi~ep~~-~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~p--D 308 (476)
++++...+... .+++. +-+-|.. ..++...-.-.+++++.+|+++|++++++= -++.+++++.. |
T Consensus 118 ~dHVLAKlAa~-n~VAIe~~L~plL~~~G~~Rar~L~~~r~~l~L~rKYd~P~VIS----------S~A~s~~~lRsPRd 186 (216)
T PRK03892 118 IDHVLARMAAK-RGVAIGFSLSPLLRANPYERANILRFMMKAWQLVNKYKVPRFIT----------SSAESKWEVRGPRD 186 (216)
T ss_pred ccHHHHHHHHH-cCeEEEEecHHHHhhCchhHHHHHHHHHHHHHHHHHcCCCEEEe----------cCcchhccCCCHHH
Confidence 45544444321 14553 4445544 457776666677999999999999998863 23445666642 6
Q ss_pred hhhhhhhcC
Q 011856 309 LTTLGKIIG 317 (476)
Q Consensus 309 i~t~sK~lg 317 (476)
++.|+..+|
T Consensus 187 l~aL~~~iG 195 (216)
T PRK03892 187 LMSLGINIG 195 (216)
T ss_pred HHHHHHHhC
Confidence 777877776
No 403
>KOG2433 consensus Uncharacterized conserved protein [Function unknown]
Probab=48.65 E-value=73 Score=31.34 Aligned_cols=58 Identities=29% Similarity=0.339 Sum_probs=40.1
Q ss_pred CcHHHHHHHHHHHHhcCCCC------CCCHHHHHHHHHHHhhCCC-CCeEEEeCCHHHHHHHHHHHHHhc
Q 011856 116 ADDQVLAALGETMKKGTSFG------APCLLENVLAEMVISAVPS-IEMVRFVNSGTEACMGVLRLARAF 178 (476)
Q Consensus 116 ~~p~v~~a~~~~l~~~~~~~------~~~~~~~~la~~l~~~~~~-~e~v~~~~sGseA~~~al~~ar~~ 178 (476)
.|-+|.+|+.+.-++...|- +..+...-|-+.| + ..++++++||+|-.+.+-.+|+.+
T Consensus 434 tHrEiQqaLvdi~DKpA~FVGSrQWIGStEis~vLn~ll-----~~~skil~v~sGaEva~~~rELA~HF 498 (577)
T KOG2433|consen 434 THREIQQALVDIQDKPAKFVGSRQWIGSTEISFVLNELL-----KLESKILAVNSGAEVAERVRELARHF 498 (577)
T ss_pred cHHHHHHHHHhccCcccceecccceecchhHHHHHHHHh-----ccceEEEEeccccHHHHHHHHHHHHh
Confidence 36688888887766643221 2344444444444 4 358999999999999999999877
No 404
>smart00642 Aamy Alpha-amylase domain.
Probab=47.17 E-value=66 Score=27.80 Aligned_cols=58 Identities=17% Similarity=0.317 Sum_probs=38.6
Q ss_pred CHHHHHHHH---hcCCCCeEEEEEcccCCCCC-------c-------c---cCCHHHHHHHHHHHHHhCCEEEEeccccC
Q 011856 232 DVSALENLF---ENNKGEIAAIILEPVVGNSG-------F-------I---APKPDFLNAIRRITKENGALLIFDEVMTG 291 (476)
Q Consensus 232 d~~~le~~l---~~~~~~~a~vi~ep~~~~~G-------~-------i---~~~~~~l~~l~~l~~~~g~llI~DEv~~g 291 (476)
|++.+.+.| ++. .+.+|.+.|++.... . + .-+.+-++++.+-|+++|+-+|+|=|...
T Consensus 17 ~~~gi~~~l~yl~~l--G~~~I~l~Pi~~~~~~~~~~~gY~~~d~~~i~~~~Gt~~d~~~lv~~~h~~Gi~vilD~V~NH 94 (166)
T smart00642 17 DLQGIIEKLDYLKDL--GVTAIWLSPIFESPQGYPSYHGYDISDYKQIDPRFGTMEDFKELVDAAHARGIKVILDVVINH 94 (166)
T ss_pred CHHHHHHHHHHHHHC--CCCEEEECcceeCCCCCCCCCCcCccccCCCCcccCCHHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 555555443 432 477888888764331 0 0 11224499999999999999999988853
No 405
>KOG3974 consensus Predicted sugar kinase [Carbohydrate transport and metabolism]
Probab=46.46 E-value=30 Score=32.01 Aligned_cols=62 Identities=19% Similarity=0.336 Sum_probs=41.3
Q ss_pred CCCCCceeeccCC----CHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEec
Q 011856 219 KGATYETLTAPFN----DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDE 287 (476)
Q Consensus 219 ~~~~~~~~~~~~~----d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DE 287 (476)
+...++.+..|+- +.+.+++.+. +.-++++-|-.+..-.+ -..+++|.+++++.++++++|-
T Consensus 74 KsYsPdLIVHP~l~~~~av~~i~k~L~----RlhavVIGPGLGRdp~~---~k~i~~iley~~~~dvP~VIDa 139 (306)
T KOG3974|consen 74 KSYSPDLIVHPVLDQENAVDIIEKLLQ----RLHAVVIGPGLGRDPAI---LKEIAKILEYLRGKDVPLVIDA 139 (306)
T ss_pred hhcCCceeecccccCCchHhHHHHHHh----heeEEEECCCCCCCHHH---HHHHHHHHHHHhcCCCcEEEcC
Confidence 3334445555542 4566677676 67889998877642212 1227889999999999999993
No 406
>COG0352 ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
Probab=43.30 E-value=55 Score=29.58 Aligned_cols=96 Identities=15% Similarity=0.208 Sum_probs=55.2
Q ss_pred HHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccc-cCccccccchhhccCCC-Cchh
Q 011856 233 VSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVM-TGFRLAYGGAQEYFGVT-PDLT 310 (476)
Q Consensus 233 ~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~-~g~r~g~~~~~~~~g~~-pDi~ 310 (476)
++.+|++++.. -+...+-+-..+.- .. .+..++++++|++||+.||+++=. .-...+..+. |.|.. -++.
T Consensus 24 ~~~ve~al~~G--v~~vQlR~K~~~~~--~~--~~~a~~~~~lc~~~~v~liINd~~dlA~~~~AdGV--HlGq~D~~~~ 95 (211)
T COG0352 24 LEWVEAALKGG--VTAVQLREKDLSDE--EY--LALAEKLRALCQKYGVPLIINDRVDLALAVGADGV--HLGQDDMPLA 95 (211)
T ss_pred HHHHHHHHhCC--CeEEEEecCCCChH--HH--HHHHHHHHHHHHHhCCeEEecCcHHHHHhCCCCEE--EcCCcccchH
Confidence 78889999842 33333444432211 01 344789999999999988876533 1111222221 33333 1233
Q ss_pred hhhhhcCCCCcEEEEEecHHHHHhhc
Q 011856 311 TLGKIIGGGLPVGAYGGRRDIMEMVA 336 (476)
Q Consensus 311 t~sK~lg~G~~iG~~~~~~~i~~~l~ 336 (476)
...|.++.++.+|+-+.+.+-.....
T Consensus 96 ~ar~~~~~~~iIG~S~h~~eea~~A~ 121 (211)
T COG0352 96 EARELLGPGLIIGLSTHDLEEALEAE 121 (211)
T ss_pred HHHHhcCCCCEEEeecCCHHHHHHHH
Confidence 56677888888998877665544443
No 407
>KOG1465 consensus Translation initiation factor 2B, beta subunit (eIF-2Bbeta/GCD7) [Translation, ribosomal structure and biogenesis]
Probab=42.60 E-value=3.1e+02 Score=26.20 Aligned_cols=107 Identities=22% Similarity=0.261 Sum_probs=60.7
Q ss_pred CCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCC--CCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCC
Q 011856 154 SIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGC--YHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFN 231 (476)
Q Consensus 154 ~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~--yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (476)
....|++|.|.+..++.-++.|+.-..+-.||+.++. +-|+.. +-.+... |+ ++..++
T Consensus 161 hsnEviLT~g~SrTV~~FL~~A~kk~Rkf~viVaE~~p~~qgH~~-Ak~la~~-----------gi------ettVI~-- 220 (353)
T KOG1465|consen 161 HSNEVILTLGSSRTVENFLKHAAKKGRKFRVIVAEGAPNNQGHEL-AKPLAQA-----------GI------ETTVIP-- 220 (353)
T ss_pred ccCceEEecCccHHHHHHHHHHHhccCceEEEEeecCCcccchHh-hHHHHHc-----------CC------eeEEec--
Confidence 4578999999999999999987554344456666542 333211 1111111 11 122221
Q ss_pred CHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 011856 232 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 285 (476)
Q Consensus 232 d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~ 285 (476)
| .++-..+.+- ....+-.-.+..|||...+.- ...++..+++|-+++|+
T Consensus 221 d-aaVfA~MsrV--nKVIigt~avl~NGgl~~~~G--~~~vAlaAk~h~vPv~V 269 (353)
T KOG1465|consen 221 D-AAVFAMMSRV--NKVIIGTHAVLANGGLRAPSG--VHTVALAAKHHSVPVIV 269 (353)
T ss_pred c-HHHHHHhhhc--ceEEEEeeeEecCCCeeccch--HHHHHHHHHhcCCcEEE
Confidence 3 3344445421 122222345778888766654 57788888999998885
No 408
>PF05621 TniB: Bacterial TniB protein; InterPro: IPR008868 This family consists of several bacterial TniB NTP-binding proteins. TniB is a probable ATP-binding protein [] which is involved in Tn5053 mercury resistance transposition [].
Probab=42.51 E-value=22 Score=33.95 Aligned_cols=120 Identities=13% Similarity=0.153 Sum_probs=69.2
Q ss_pred HHHhcCCCCeEEEEEcccCCC-CCcccCCHHHHHHHHHHHHHhCCEEE---EeccccCccccc----c---chhhccCCC
Q 011856 238 NLFENNKGEIAAIILEPVVGN-SGFIAPKPDFLNAIRRITKENGALLI---FDEVMTGFRLAY----G---GAQEYFGVT 306 (476)
Q Consensus 238 ~~l~~~~~~~a~vi~ep~~~~-~G~i~~~~~~l~~l~~l~~~~g~llI---~DEv~~g~r~g~----~---~~~~~~g~~ 306 (476)
.+++.. .++++|++-+++- .|...-..+|+..|+.|+.+..+.+| .+|++.-+++.. . .....|...
T Consensus 139 ~llr~~--~vrmLIIDE~H~lLaGs~~~qr~~Ln~LK~L~NeL~ipiV~vGt~~A~~al~~D~QLa~RF~~~~Lp~W~~d 216 (302)
T PF05621_consen 139 RLLRRL--GVRMLIIDEFHNLLAGSYRKQREFLNALKFLGNELQIPIVGVGTREAYRALRTDPQLASRFEPFELPRWELD 216 (302)
T ss_pred HHHHHc--CCcEEEeechHHHhcccHHHHHHHHHHHHHHhhccCCCeEEeccHHHHHHhccCHHHHhccCCccCCCCCCC
Confidence 455554 6889999988884 78888889999999999999999887 455554333221 1 111233334
Q ss_pred CchhhhhhhcCCCCcEEE--EEecHHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHH
Q 011856 307 PDLTTLGKIIGGGLPVGA--YGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLK 362 (476)
Q Consensus 307 pDi~t~sK~lg~G~~iG~--~~~~~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~ 362 (476)
.|...|=++|-..+|+.- -+..+++.+.+-... .+.+-...-+...||.+|++
T Consensus 217 ~ef~~LL~s~e~~LPLr~~S~l~~~~la~~i~~~s---~G~iG~l~~ll~~aA~~AI~ 271 (302)
T PF05621_consen 217 EEFRRLLASFERALPLRKPSNLASPELARRIHERS---EGLIGELSRLLNAAAIAAIR 271 (302)
T ss_pred cHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHc---CCchHHHHHHHHHHHHHHHh
Confidence 444444444443344322 145667766664211 11122223455556666654
No 409
>cd01121 Sms Sms (bacterial radA) DNA repair protein. This protein is not related to archael radA any more than is to other RecA-like NTPases. Sms has a role in recombination and recombinational repair and is responsible for the stabilization or processing of branched DNA molecules.
Probab=41.34 E-value=50 Score=32.80 Aligned_cols=57 Identities=11% Similarity=0.160 Sum_probs=37.8
Q ss_pred eccCCCHHHHHHHHhcCCCCeEEEEEcccCCCC--------CcccCCHHHHHHHHHHHHHhCCEEEE
Q 011856 227 TAPFNDVSALENLFENNKGEIAAIILEPVVGNS--------GFIAPKPDFLNAIRRITKENGALLIF 285 (476)
Q Consensus 227 ~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~--------G~i~~~~~~l~~l~~l~~~~g~llI~ 285 (476)
.+...+++.+.+.+++. +...|++++++... |...--.+++..|.++++++|+.+|+
T Consensus 141 l~~e~~le~I~~~i~~~--~~~lVVIDSIq~l~~~~~~~~~g~~~qvr~~~~~L~~lak~~~itvil 205 (372)
T cd01121 141 LLAETNLEDILASIEEL--KPDLVIIDSIQTVYSSELTSAPGSVSQVRECTAELMRFAKERNIPIFI 205 (372)
T ss_pred EEccCcHHHHHHHHHhc--CCcEEEEcchHHhhccccccCCCCHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 33445788888888754 57789999986431 11111234567789999999987654
No 410
>cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases. The best characterized member in this family is TesA, an E. coli periplasmic protein with thioesterase, esterase, arylesterase, protease and lysophospholipase activity.
Probab=40.97 E-value=2.2e+02 Score=24.12 Aligned_cols=38 Identities=16% Similarity=0.192 Sum_probs=22.7
Q ss_pred CeEEEEEcccC-CCCCcccCCHHHHHHHHHHHHHhCCEEE
Q 011856 246 EIAAIILEPVV-GNSGFIAPKPDFLNAIRRITKENGALLI 284 (476)
Q Consensus 246 ~~a~vi~ep~~-~~~G~i~~~~~~l~~l~~l~~~~g~llI 284 (476)
....+++.+.. .+.+. .....+-+.++++|+++++.++
T Consensus 101 ~~~vil~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~~~~~ 139 (177)
T cd01822 101 GAPVLLVGMQAPPNYGP-RYTRRFAAIYPELAEEYGVPLV 139 (177)
T ss_pred CCeEEEEecCCCCccch-HHHHHHHHHHHHHHHHcCCcEe
Confidence 34556665432 22221 1235667888899999998666
No 411
>PF02677 DUF208: Uncharacterized BCR, COG1636; InterPro: IPR003828 This entry describes proteins of unknown function.
Probab=39.74 E-value=70 Score=27.92 Aligned_cols=49 Identities=22% Similarity=0.362 Sum_probs=35.8
Q ss_pred HHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHH---HHHHHHHhCCEEEEeccc
Q 011856 233 VSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNA---IRRITKENGALLIFDEVM 289 (476)
Q Consensus 233 ~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~---l~~l~~~~g~llI~DEv~ 289 (476)
..-++.+.++ +-++.++.-+|+ |.|..||.++ +.++|++.|+.||.++ |
T Consensus 12 ~~~~~~L~~~-g~~vt~~fyNPN------IhP~~Ey~~R~~~~~~~~~~~~i~~i~~~-Y 63 (176)
T PF02677_consen 12 TYPLERLREE-GFDVTGYFYNPN------IHPYEEYERRLEELKRFAEKLGIPLIEGD-Y 63 (176)
T ss_pred HHHHHHHHHC-CCCeEEEEeCCC------CCcHHHHHHHHHHHHHHHHHcCCCEEecC-C
Confidence 3445555544 347888888886 6788887655 5667999999999998 5
No 412
>COG0108 RibB 3,4-dihydroxy-2-butanone 4-phosphate synthase [Coenzyme metabolism]
Probab=38.61 E-value=75 Score=28.26 Aligned_cols=35 Identities=29% Similarity=0.377 Sum_probs=28.7
Q ss_pred CeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 011856 246 EIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 285 (476)
Q Consensus 246 ~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~ 285 (476)
..++||||=.+. .|.... .+++.+++++||+.+|.
T Consensus 156 ~Pa~VicEi~~~-dG~mar----~~~~~~fa~~h~l~~it 190 (203)
T COG0108 156 KPAGVICEIMND-DGTMAR----LPELEEFAKEHGLPVIT 190 (203)
T ss_pred CCcEEEEEEeCC-CccccC----hHHHHHHHHHcCCcEEE
Confidence 568899987765 666777 78899999999999884
No 413
>PF13167 GTP-bdg_N: GTP-binding GTPase N-terminal
Probab=38.53 E-value=1.6e+02 Score=22.84 Aligned_cols=58 Identities=19% Similarity=0.295 Sum_probs=34.2
Q ss_pred CHHHHHHHHhcCCCCeEEEEEccc-CCCCCcccCCHHHHHHHHHHHHHhCC-EEEEecccc
Q 011856 232 DVSALENLFENNKGEIAAIILEPV-VGNSGFIAPKPDFLNAIRRITKENGA-LLIFDEVMT 290 (476)
Q Consensus 232 d~~~le~~l~~~~~~~a~vi~ep~-~~~~G~i~~~~~~l~~l~~l~~~~g~-llI~DEv~~ 290 (476)
+++.++.+.+..+-++..-++-.. ..+.... --.+-+++|.++++++++ ++|+|+--+
T Consensus 9 ~l~El~~L~~t~g~~vv~~~~q~~~~~~p~~~-iG~GK~eei~~~~~~~~~d~vvfd~~Ls 68 (95)
T PF13167_consen 9 SLEELEELAETAGYEVVGTVVQKRRKPDPKTY-IGSGKVEEIKELIEELDADLVVFDNELS 68 (95)
T ss_pred HHHHHHHHHHHCCCeEEEEEEecCCCCCccee-echhHHHHHHHHHhhcCCCEEEECCCCC
Confidence 466777777654445544333322 2233333 345569999999999887 566775443
No 414
>cd03315 MLE_like Muconate lactonizing enzyme (MLE) like subgroup of the enolase superfamily. Enzymes of this subgroup share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and residues that can function as general acid/base catalysts, a Lys-X-Lys motif and another conserved lysine. Despite these conserved residues, the members of the MLE subgroup, like muconate lactonizing enzyme, o-succinylbenzoate synthase (OSBS) and N-acylamino acid racemase (NAAAR), catalyze different reactions.
Probab=37.78 E-value=3.4e+02 Score=25.25 Aligned_cols=144 Identities=12% Similarity=0.039 Sum_probs=75.7
Q ss_pred HHHHHHHHHHHHhcCC-----CCCCCHHHHHHHHHHHhhCCCCCeEEE-eCCHHHHHHHHHHHHHhccCCceEEEEeCCC
Q 011856 118 DQVLAALGETMKKGTS-----FGAPCLLENVLAEMVISAVPSIEMVRF-VNSGTEACMGVLRLARAFTGRERIIKFEGCY 191 (476)
Q Consensus 118 p~v~~a~~~~l~~~~~-----~~~~~~~~~~la~~l~~~~~~~e~v~~-~~sGseA~~~al~~ar~~~~~~~ii~~~~~y 191 (476)
.++.+.+.+..++|.. .+...+...+.-+.+.+.+++.-.+.+ .|.+.. .+.|+++++.+.. -.+..++..+
T Consensus 87 ~~~~~~~~~~~~~G~~~~KiKvg~~~~~d~~~v~~vr~~~g~~~~l~vDan~~~~-~~~a~~~~~~l~~-~~i~~iEeP~ 164 (265)
T cd03315 87 AEVAEEARRALEAGFRTFKLKVGRDPARDVAVVAALREAVGDDAELRVDANRGWT-PKQAIRALRALED-LGLDYVEQPL 164 (265)
T ss_pred HHHHHHHHHHHHCCCCEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEEeCCCCcC-HHHHHHHHHHHHh-cCCCEEECCC
Confidence 4555556555555421 121223344566667776643224555 454444 5677777666543 2354555555
Q ss_pred CCCchhHH-hhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHH
Q 011856 192 HGHADPFL-VKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLN 270 (476)
Q Consensus 192 hg~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~ 270 (476)
+......+ ...... ..|...+ -...+..+++++++.. ....|.+.+.. .|.+.. ..
T Consensus 165 ~~~d~~~~~~l~~~~----~ipia~d-----------E~~~~~~~~~~~i~~~--~~d~v~~k~~~--~GGi~~----~~ 221 (265)
T cd03315 165 PADDLEGRAALARAT----DTPIMAD-----------ESAFTPHDAFRELALG--AADAVNIKTAK--TGGLTK----AQ 221 (265)
T ss_pred CcccHHHHHHHHhhC----CCCEEEC-----------CCCCCHHHHHHHHHhC--CCCEEEEeccc--ccCHHH----HH
Confidence 44322211 111110 0110000 0123678888888753 45567777654 344555 78
Q ss_pred HHHHHHHHhCCEEEEe
Q 011856 271 AIRRITKENGALLIFD 286 (476)
Q Consensus 271 ~l~~l~~~~g~llI~D 286 (476)
++.++|+++|+.++.=
T Consensus 222 ~~~~~A~~~gi~~~~~ 237 (265)
T cd03315 222 RVLAVAEALGLPVMVG 237 (265)
T ss_pred HHHHHHHHcCCcEEec
Confidence 8999999999988764
No 415
>COG1066 Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=37.12 E-value=75 Score=31.79 Aligned_cols=58 Identities=7% Similarity=0.175 Sum_probs=40.8
Q ss_pred eeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCC--------CCcccCCHHHHHHHHHHHHHhCCEEE
Q 011856 225 TLTAPFNDVSALENLFENNKGEIAAIILEPVVGN--------SGFIAPKPDFLNAIRRITKENGALLI 284 (476)
Q Consensus 225 ~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~--------~G~i~~~~~~l~~l~~l~~~~g~llI 284 (476)
++.++..|++++.+.+++. +...+|++++|.. .|.+.--.+--.+|.++++++|+.++
T Consensus 149 l~l~aEt~~e~I~~~l~~~--~p~lvVIDSIQT~~s~~~~SapGsVsQVRe~t~~L~~~AK~~~i~~f 214 (456)
T COG1066 149 LYLLAETNLEDIIAELEQE--KPDLVVIDSIQTLYSEEITSAPGSVSQVREVAAELMRLAKTKNIAIF 214 (456)
T ss_pred eEEehhcCHHHHHHHHHhc--CCCEEEEeccceeecccccCCCCcHHHHHHHHHHHHHHHHHcCCeEE
Confidence 4555666899999999864 6778888887743 24333334556678889999998654
No 416
>cd04920 ACT_AKiii-DAPDC_2 ACT domains of a bifunctional AKIII (LysC)-like aspartokinase/meso-diaminopimelate decarboxylase (DAPDC). This CD includes the second of two ACT domains of a bifunctional AKIII (LysC)-like aspartokinase/meso-diaminopimelate decarboxylase (DAPDC) bacterial protein. Aspartokinase (AK) is the first enzyme in the aspartate metabolic pathway and catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. The lysA gene encodes the enzyme DAPDC, a pyridoxal-5'-phosphate (PLP)-dependent enzyme which catalyzes the final step in the lysine biosynthetic pathway converting meso-diaminopimelic acid (DAP) to l-lysine. Tandem ACT domains are positioned centrally with the AK catalytic domain N-terminal and the DAPDC domains C-terminal. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=36.67 E-value=84 Score=21.93 Aligned_cols=45 Identities=4% Similarity=-0.115 Sum_probs=34.6
Q ss_pred HHHHHHHHHHCCeEeccCCCcceEEeCCCcHHHHHHHHHHHHHHH
Q 011856 427 FARFYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHTITAAEKVK 471 (476)
Q Consensus 427 ~~~~~~~l~~~Gv~~~~~~~~~~~~~~~~t~e~i~~~~~~l~~~~ 471 (476)
..++.+.|.+.++.+...+.....+++...++|.++++.+|-+.+
T Consensus 17 ~~~~~~~L~~~~i~~i~~~~s~~~is~vv~~~d~~~av~~LH~~f 61 (63)
T cd04920 17 LGPALEVFGKKPVHLVSQAANDLNLTFVVDEDQADGLCARLHFQL 61 (63)
T ss_pred HHHHHHHHhcCCceEEEEeCCCCeEEEEEeHHHHHHHHHHHHHHH
Confidence 456777777788877655555678888889999999999987765
No 417
>TIGR00250 RNAse_H_YqgF RNAse H-fold protein YqgF. This protein family, which exhibits an RNAse H fold in crystal structure, has been proposed as a putative Holliday junction resolvase, an alternate to RuvC.
Probab=36.30 E-value=77 Score=26.15 Aligned_cols=56 Identities=21% Similarity=0.343 Sum_probs=32.3
Q ss_pred CHHHHHHHHhcCCCCeEEEEE-cccCCCCCcccCCHHHHHHHH-HHHHHhCCE-EEEecccc
Q 011856 232 DVSALENLFENNKGEIAAIIL-EPVVGNSGFIAPKPDFLNAIR-RITKENGAL-LIFDEVMT 290 (476)
Q Consensus 232 d~~~le~~l~~~~~~~a~vi~-ep~~~~~G~i~~~~~~l~~l~-~l~~~~g~l-lI~DEv~~ 290 (476)
+++.|+++++++ .+..|++ -|.+ +.|...+.....++.. +|.+++++. ..+||-+|
T Consensus 36 ~~~~l~~~i~~~--~~~~iVvGlP~~-~dG~~~~~a~~v~~f~~~L~~~~~~~v~~~DEr~T 94 (130)
T TIGR00250 36 DWSRIEELLKEW--TPDKIVVGLPLN-MDGTEGPLTERAQKFANRLEGRFGVPVVLWDERLS 94 (130)
T ss_pred HHHHHHHHHHHc--CCCEEEEeccCC-CCcCcCHHHHHHHHHHHHHHHHhCCCEEEEcCCcC
Confidence 578899999876 4555555 5654 4455544332222222 233445664 55899886
No 418
>cd07571 ALP_N-acyl_transferase Apolipoprotein N-acyl transferase (class 9 nitrilases). ALP N-acyl transferase (Lnt), is an essential membrane-bound enzyme in gram-negative bacteria, which catalyzes the N-acylation of apolipoproteins, the final step in lipoprotein maturation. This is a reverse amidase (i.e. condensation) reaction. This subgroup belongs to a larger nitrilase superfamily comprised of nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes, which depend on a Glu-Lys-Cys catalytic triad. This superfamily has been classified in the literature based on global and structure based sequence analysis into thirteen different enzyme classes (referred to as 1-13), this subgroup corresponds to class 9.
Probab=35.64 E-value=76 Score=29.80 Aligned_cols=38 Identities=21% Similarity=0.274 Sum_probs=26.7
Q ss_pred EEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 011856 248 AAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 285 (476)
Q Consensus 248 a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~ 285 (476)
+-+++-|-...+|.......++++|.++|+++++.+|+
T Consensus 40 a~lvvfPE~~l~g~~~~~~~~~~~l~~~ak~~~i~ii~ 77 (270)
T cd07571 40 PDLVVWPETALPFDLQRDPDALARLARAARAVGAPLLT 77 (270)
T ss_pred CCEEEecCCcCCcccccCHHHHHHHHHHHHhcCCeEEE
Confidence 34555555555555444566799999999999998774
No 419
>cd03319 L-Ala-DL-Glu_epimerase L-Ala-D/L-Glu epimerase catalyzes the epimerization of L-Ala-D/L-Glu and other dipeptides. The genomic context and the substrate specificity of characterized members of this family from E.coli and B.subtilis indicates a possible role in the metabolism of the murein peptide of peptidoglycan, of which L-Ala-D-Glu is a component. L-Ala-D/L-Glu epimerase is a member of the enolase-superfamily, which is characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion.
Probab=35.45 E-value=4.1e+02 Score=25.49 Aligned_cols=145 Identities=16% Similarity=0.139 Sum_probs=77.5
Q ss_pred CcHHHHHHHHHHHHhcCC-----CCCCCHHHHHHHHHHHhhCCCCCeEEE-eCCHHHHHHHHHHHHHhccCCceEEEEeC
Q 011856 116 ADDQVLAALGETMKKGTS-----FGAPCLLENVLAEMVISAVPSIEMVRF-VNSGTEACMGVLRLARAFTGRERIIKFEG 189 (476)
Q Consensus 116 ~~p~v~~a~~~~l~~~~~-----~~~~~~~~~~la~~l~~~~~~~e~v~~-~~sGseA~~~al~~ar~~~~~~~ii~~~~ 189 (476)
.++++.+.+.+..+.|.. .+...+...+.-+.+.+.++ .-.+.+ +|++... ..|++.++.+..- .+..++.
T Consensus 134 ~~~~~~~~~~~~~~~Gf~~iKik~g~~~~~d~~~v~~lr~~~g-~~~l~vD~n~~~~~-~~A~~~~~~l~~~-~l~~iEe 210 (316)
T cd03319 134 TPEAMAAAAKKAAKRGFPLLKIKLGGDLEDDIERIRAIREAAP-DARLRVDANQGWTP-EEAVELLRELAEL-GVELIEQ 210 (316)
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEeCCChhhHHHHHHHHHHhCC-CCeEEEeCCCCcCH-HHHHHHHHHHHhc-CCCEEEC
Confidence 345566666666665421 12222334556666666664 224444 5555543 5577766655433 4555566
Q ss_pred CCCCCchhHH-hhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHH
Q 011856 190 CYHGHADPFL-VKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDF 268 (476)
Q Consensus 190 ~yhg~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~ 268 (476)
.+.......+ .+.... ..|...+ + ...+.++++++++.. ....|.+.+.. .|.+..
T Consensus 211 P~~~~d~~~~~~L~~~~----~ipIa~~-------E----~~~~~~~~~~~~~~~--~~d~v~~~~~~--~GGi~~---- 267 (316)
T cd03319 211 PVPAGDDDGLAYLRDKS----PLPIMAD-------E----SCFSAADAARLAGGG--AYDGINIKLMK--TGGLTE---- 267 (316)
T ss_pred CCCCCCHHHHHHHHhcC----CCCEEEe-------C----CCCCHHHHHHHHhcC--CCCEEEEeccc--cCCHHH----
Confidence 5544221122 111110 0110000 0 112678888888753 46677777654 234544
Q ss_pred HHHHHHHHHHhCCEEEEe
Q 011856 269 LNAIRRITKENGALLIFD 286 (476)
Q Consensus 269 l~~l~~l~~~~g~llI~D 286 (476)
..++.++|++||+.++.=
T Consensus 268 ~~~~~~~a~~~gi~~~~~ 285 (316)
T cd03319 268 ALRIADLARAAGLKVMVG 285 (316)
T ss_pred HHHHHHHHHHcCCCEEEE
Confidence 788999999999987753
No 420
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=34.48 E-value=2.7e+02 Score=23.15 Aligned_cols=49 Identities=18% Similarity=0.235 Sum_probs=30.0
Q ss_pred HHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHh-CCEEEEe
Q 011856 233 VSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKEN-GALLIFD 286 (476)
Q Consensus 233 ~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~-g~llI~D 286 (476)
.+.|+++++.-+++...+++.|..+ ....+++-+.+.++|++| ++. ++|
T Consensus 66 ~~nl~~ii~~~~~~~~ivlv~~~~~----~~~~~~~n~~~~~~a~~~~~v~-~id 115 (150)
T cd01840 66 KDQLDELLDALGPDRQVYLVNPHVP----RPWEPDVNAYLLDAAKKYKNVT-IID 115 (150)
T ss_pred HHHHHHHHHHcCCCCEEEEEECCCC----cchHHHHHHHHHHHHHHCCCcE-Eec
Confidence 4566666665444466677776521 122456677889999999 654 444
No 421
>PF06153 DUF970: Protein of unknown function (DUF970); InterPro: IPR010375 This is a family of uncharacterised bacterial proteins.; PDB: 3M05_A.
Probab=33.61 E-value=56 Score=26.03 Aligned_cols=49 Identities=6% Similarity=0.088 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHCCeEeccC----CC---cceEEeCCCcHHHHHHHHHHHHHHHHH
Q 011856 425 TKFARFYRGMLEEGVYFAPS----QF---EAGFTSLAHSSDDIQHTITAAEKVKMR 473 (476)
Q Consensus 425 ~~~~~~~~~l~~~Gv~~~~~----~~---~~~~~~~~~t~e~i~~~~~~l~~~~~~ 473 (476)
+++..+.+.|.++|+.+... ++ +...+.....++++|+.++.+++.+.+
T Consensus 11 ~Da~~l~~~L~~~g~~~TkLsstGGFLr~GNtTlliGvede~v~~vl~iIk~~c~~ 66 (109)
T PF06153_consen 11 EDADDLSDALNENGFRVTKLSSTGGFLREGNTTLLIGVEDEKVDEVLEIIKENCKK 66 (109)
T ss_dssp HHHHHHHHHHHHTT--EEEEEEEETTTTEEEEEEEEEEEGGGHHHHHHHHHHHH--
T ss_pred hhHHHHHHHHHHCCceEEEEecccceeccCCEEEEEEecHHHHHHHHHHHHHhhcC
Confidence 45578889999999976532 21 122456677899999999999998764
No 422
>cd03328 MR_like_3 Mandelate racemase (MR)-like subfamily of the enolase superfamily, subgroup 3. Enzymes of this subgroup share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and conserved catalytic residues, a Lys-X-Lys motif and a conserved histidine-aspartate dyad. This subgroup's function is unknown.
Probab=32.65 E-value=4.2e+02 Score=26.01 Aligned_cols=145 Identities=17% Similarity=0.155 Sum_probs=69.0
Q ss_pred HHHHHHHHHHHHhcCC-----CCCCCHHHHHHHHHHHhhCCCCCeEEE-eCCHHHHHHHHHHHHHhccCCceEEEEeCCC
Q 011856 118 DQVLAALGETMKKGTS-----FGAPCLLENVLAEMVISAVPSIEMVRF-VNSGTEACMGVLRLARAFTGRERIIKFEGCY 191 (476)
Q Consensus 118 p~v~~a~~~~l~~~~~-----~~~~~~~~~~la~~l~~~~~~~e~v~~-~~sGseA~~~al~~ar~~~~~~~ii~~~~~y 191 (476)
.++.+.+.+..++|.. .+...+...+..+.+.+.+++.-.+++ .|.+. ....|+++++.+.+ -++..++...
T Consensus 140 e~~~~~a~~~~~~Gf~~~Kikvg~~~~~d~~~v~~vRe~~G~~~~l~vDaN~~~-~~~~A~~~~~~l~~-~~~~~~EeP~ 217 (352)
T cd03328 140 DRLREQLSGWVAQGIPRVKMKIGRDPRRDPDRVAAARRAIGPDAELFVDANGAY-SRKQALALARAFAD-EGVTWFEEPV 217 (352)
T ss_pred HHHHHHHHHHHHCCCCEEEeecCCCHHHHHHHHHHHHHHcCCCCeEEEECCCCC-CHHHHHHHHHHHHH-hCcchhhCCC
Confidence 4455555555555421 121123334555666666643224555 55444 34567777766533 3444454444
Q ss_pred CCC-chhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHH
Q 011856 192 HGH-ADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLN 270 (476)
Q Consensus 192 hg~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~ 270 (476)
+.. ......+....... +|...+ +. ..+..++.++++.. ... ++.+-....|.+.. ..
T Consensus 218 ~~~d~~~~~~l~~~~~~~--iPIa~g-------E~----~~~~~~~~~li~~~--a~d--iv~~d~~~~GGit~----~~ 276 (352)
T cd03328 218 SSDDLAGLRLVRERGPAG--MDIAAG-------EY----AYTLAYFRRLLEAH--AVD--VLQADVTRCGGVTG----FL 276 (352)
T ss_pred ChhhHHHHHHHHhhCCCC--CCEEec-------cc----ccCHHHHHHHHHcC--CCC--EEecCccccCCHHH----HH
Confidence 332 22222221110000 111000 00 11577888888742 222 33443344344555 78
Q ss_pred HHHHHHHHhCCEEEE
Q 011856 271 AIRRITKENGALLIF 285 (476)
Q Consensus 271 ~l~~l~~~~g~llI~ 285 (476)
++.++|+.+|+.+..
T Consensus 277 ~ia~~A~a~gi~~~~ 291 (352)
T cd03328 277 QAAALAAAHHVDLSA 291 (352)
T ss_pred HHHHHHHHcCCeecc
Confidence 899999999987653
No 423
>cd04937 ACT_AKi-DapG-BS_2 ACT domains of the diaminopimelate-sensitive aspartokinase (AK) isoenzyme AKI. This CD includes the C-terminal of the two ACT domains of the diaminopimelate-sensitive aspartokinase (AK) isoenzyme AKI, a monofunctional class enzyme found in Bacilli (Bacillus subtilis (BS) strain 168), Clostridia, and Actinobacteria bacterial species. In B. subtilis, the regulation of the diaminopimelate-lysine biosynthetic pathway involves dual control by diaminopimelate and lysine, effected through separate diaminopimelate- and lysine-sensitive AK isoenzymes. AKI activity is invariant during the exponential and stationary phases of growth and is not altered by addition of amino acids to the growth medium. The role of this isoenzyme is most likely to provide a constant level of aspartyl-beta-phosphate for the biosynthesis of diaminopimelate for peptidoglycan synthesis and dipicolinate during sporulation. The BS AKI is tetrameric consisting of two alpha and two beta subunits; th
Probab=32.15 E-value=99 Score=21.51 Aligned_cols=46 Identities=17% Similarity=0.197 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHCCeEeccCCCcceEEeCCCcHHHHHHHHHHHHHHH
Q 011856 426 KFARFYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHTITAAEKVK 471 (476)
Q Consensus 426 ~~~~~~~~l~~~Gv~~~~~~~~~~~~~~~~t~e~i~~~~~~l~~~~ 471 (476)
...++...|.+.||-+.........+++...+++.++++.+|.+.+
T Consensus 17 i~~~if~aL~~~~I~v~~~~~Se~~is~~v~~~~~~~av~~Lh~~f 62 (64)
T cd04937 17 VMAKIVGALSKEGIEILQTADSHTTISCLVSEDDVKEAVNALHEAF 62 (64)
T ss_pred HHHHHHHHHHHCCCCEEEEEcCccEEEEEEcHHHHHHHHHHHHHHh
Confidence 3467788888999877544334567788889999999999988765
No 424
>cd04915 ACT_AK-Ectoine_2 ACT domains located C-terminal to the catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway. This CD includes the second of two ACT domains located C-terminal to the catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway found in Methylomicrobium alcaliphilum, Vibrio cholerae, and various other halotolerant or halophilic bacteria. Bacteria exposed to hyperosmotic stress accumulate organic solutes called 'compatible solutes' of which ectoine, a heterocyclic amino acid, is one. Apart from its osmotic function, ectoine also exhibits a protective effect on proteins, nucleic acids and membranes against a variety of stress factors. de novo synthesis of ectoine starts with the phosphorylation of L-aspartate and shares its first two enzymatic steps with the biosynthesis of amino acids of the aspartate family: aspartokinas
Probab=31.76 E-value=1.2e+02 Score=21.41 Aligned_cols=46 Identities=17% Similarity=0.134 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHCCeEec--cCCCcceEEeCCCcHHHHHHHHHHHHHHH
Q 011856 426 KFARFYRGMLEEGVYFA--PSQFEAGFTSLAHSSDDIQHTITAAEKVK 471 (476)
Q Consensus 426 ~~~~~~~~l~~~Gv~~~--~~~~~~~~~~~~~t~e~i~~~~~~l~~~~ 471 (476)
...++.+.|.+.||-+. ..+.....+++...+++.++++.+|.+.+
T Consensus 17 v~~ki~~~L~~~~I~v~~i~~~~s~~~is~~V~~~~~~~av~~Lh~~f 64 (66)
T cd04915 17 VLARGLAALAEAGIEPIAAHQSMRNVDVQFVVDRDDYDNAIKALHAAL 64 (66)
T ss_pred HHHHHHHHHHHCCCCEEEEEecCCeeEEEEEEEHHHHHHHHHHHHHHH
Confidence 34677888889988763 22333467888889999999999998765
No 425
>PRK08535 translation initiation factor IF-2B subunit delta; Provisional
Probab=31.75 E-value=4.8e+02 Score=25.16 Aligned_cols=139 Identities=14% Similarity=0.143 Sum_probs=71.2
Q ss_pred cHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCC--CCCC
Q 011856 117 DDQVLAALGETMKKGTSFGAPCLLENVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGC--YHGH 194 (476)
Q Consensus 117 ~p~v~~a~~~~l~~~~~~~~~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~--yhg~ 194 (476)
..++++.+.+.++.... .-......+++.-.++..+ ..+++|.+-+..+...|+.|.....+-+|++.+.. +.|.
T Consensus 85 ~~~~k~~l~e~~~~~~~--e~~~~~~~I~~~a~~~i~~-g~~ILT~~~S~tv~~~l~~A~~~~k~~~V~v~EsrP~~~G~ 161 (310)
T PRK08535 85 VEEARESVIERAEEFIE--SSENAVEKIGEIGAKRIRD-GDVIMTHCNSSAALSVIKTAHEQGKDIEVIATETRPRNQGH 161 (310)
T ss_pred HHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHcCC-CCEEEEeCCcHHHHHHHHHHHHCCCeEEEEEecCCchhhHH
Confidence 35555555555444110 0122234555555555543 44777777777788888765443344566665442 2331
Q ss_pred chhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEE--EcccCCCCCcccCCHHHHHHH
Q 011856 195 ADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAII--LEPVVGNSGFIAPKPDFLNAI 272 (476)
Q Consensus 195 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi--~ep~~~~~G~i~~~~~~l~~l 272 (476)
..+-.+... |+ ++..++ | .++-..+.+ +-.|+ .+.+..+||.+.. -+ --.+
T Consensus 162 -~~a~~L~~~-----------GI------~vtlI~--D-sav~~~m~~----vd~VivGAd~v~~nG~v~nk-iG-T~~~ 214 (310)
T PRK08535 162 -ITAKELAEY-----------GI------PVTLIV--D-SAVRYFMKD----VDKVVVGADAITANGAVINK-IG-TSQI 214 (310)
T ss_pred -HHHHHHHHC-----------CC------CEEEEe--h-hHHHHHHHh----CCEEEECccEEecCCCEEeH-Hh-HHHH
Confidence 111111111 21 122222 2 333444542 33444 4777777776644 33 3457
Q ss_pred HHHHHHhCCEEEE
Q 011856 273 RRITKENGALLIF 285 (476)
Q Consensus 273 ~~l~~~~g~llI~ 285 (476)
.-+|+.|++++++
T Consensus 215 A~~Ak~~~vPv~V 227 (310)
T PRK08535 215 ALAAHEARVPFMV 227 (310)
T ss_pred HHHHHHhCCCEEE
Confidence 7789999998775
No 426
>KOG0352 consensus ATP-dependent DNA helicase [Replication, recombination and repair]
Probab=31.51 E-value=2.2e+02 Score=28.67 Aligned_cols=59 Identities=20% Similarity=0.356 Sum_probs=35.4
Q ss_pred CCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhC-CEEEEeccccCccccccchhhccCCCCchhhhhh
Q 011856 243 NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENG-ALLIFDEVMTGFRLAYGGAQEYFGVTPDLTTLGK 314 (476)
Q Consensus 243 ~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g-~llI~DEv~~g~r~g~~~~~~~~g~~pDi~t~sK 314 (476)
..++++.+.+.|-+.. +..|-.-|..|..++- .++++||+|+ ...|+ .++.||.++++-
T Consensus 110 ekp~~K~LYITPE~AA------t~~FQ~lLn~L~~r~~L~Y~vVDEAHC---VSQWG----HDFRPDYL~LG~ 169 (641)
T KOG0352|consen 110 EKPTIKMLYITPEGAA------TDGFQKLLNGLANRDVLRYIVVDEAHC---VSQWG----HDFRPDYLTLGS 169 (641)
T ss_pred cCCceeEEEEchhhhh------hhhHHHHHHHHhhhceeeeEEechhhh---Hhhhc----cccCcchhhhhh
Confidence 3457889999887532 3343344444444433 2589999996 11111 246899988763
No 427
>PF00154 RecA: recA bacterial DNA recombination protein; InterPro: IPR013765 The recA gene product is a multifunctional enzyme that plays a role in homologous recombination, DNA repair and induction of the SOS response []. In homologous recombination, the protein functions as a DNA-dependent ATPase, promoting synapsis, heteroduplex formation and strand exchange between homologous DNAs []. RecA also acts as a protease cofactor that promotes autodigestion of the lexA product and phage repressors. The proteolytic inactivation of the lexA repressor by an activated form of recA may cause a derepression of the 20 or so genes involved in the SOS response, which regulates DNA repair, induced mutagenesis, delayed cell division and prophage induction in response to DNA damage []. RecA is a protein of about 350 amino-acid residues. Its sequence is very well conserved [, , ] among eubacterial species. It is also found in the chloroplast of plants []. RecA-like proteins are found in archaea and diverse eukaryotic organisms, like fission yeast, mouse or human. In the filament visualised by X-ray crystallography, beta-strand 3, the loop C-terminal to beta-strand 2, and alpha-helix D of the core domain form one surface that packs against alpha-helix A and beta-strand 0 (the N-terminal domain) of an adjacent monomer during polymerisation []. The core ATP-binding site domain is well conserved, with 14 invariant residues. It contains the nucleotide binding loop between beta-strand 1 and alpha-helix C. The Escherichia coli sequence GPESSGKT matches the consensus sequence of amino acids (G/A)XXXXGK(T/S) for the Walker A box (also referred to as the P-loop) found in a number of nucleoside triphosphate (NTP)-binding proteins. Another nucleotide binding motif, the Walker B box is found at beta-strand 4 in the RecA structure. The Walker B box is characterised by four hydrophobic amino acids followed by an acidic residue (usually aspartate). Nucleotide specificity and additional ATP binding interactions are contributed by the amino acid residues at beta-strand 2 and the loop C-terminal to that strand, all of which are greater than 90% conserved among bacterial RecA proteins.; GO: 0003697 single-stranded DNA binding, 0005524 ATP binding, 0006281 DNA repair; PDB: 2IN0_A 1MO3_A 3IFJ_A 2IN8_A 2IMZ_B 1G18_A 1MO4_A 3IGD_A 2L8L_A 2IN9_A ....
Probab=31.37 E-value=3.2e+02 Score=26.53 Aligned_cols=109 Identities=14% Similarity=0.174 Sum_probs=48.9
Q ss_pred EEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCC----HH
Q 011856 159 RFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFND----VS 234 (476)
Q Consensus 159 ~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d----~~ 234 (476)
++.+.++--...++.....+...+..++|-.+-|+.....+...|.... .++.+..+. ++
T Consensus 58 i~G~~ssGKttLaL~~ia~~q~~g~~~a~ID~e~~ld~~~a~~lGvdl~----------------rllv~~P~~~E~al~ 121 (322)
T PF00154_consen 58 IYGPESSGKTTLALHAIAEAQKQGGICAFIDAEHALDPEYAESLGVDLD----------------RLLVVQPDTGEQALW 121 (322)
T ss_dssp EEESTTSSHHHHHHHHHHHHHHTT-EEEEEESSS---HHHHHHTT--GG----------------GEEEEE-SSHHHHHH
T ss_pred EeCCCCCchhhhHHHHHHhhhcccceeEEecCcccchhhHHHhcCcccc----------------ceEEecCCcHHHHHH
Confidence 4555555555555554444433344444433444443333333333211 123332222 44
Q ss_pred HHHHHHhcCCCCeEEEEEcccCCCC------Cccc---------CCHHHHHHHHHHHHHhCCEEEE
Q 011856 235 ALENLFENNKGEIAAIILEPVVGNS------GFIA---------PKPDFLNAIRRITKENGALLIF 285 (476)
Q Consensus 235 ~le~~l~~~~~~~a~vi~ep~~~~~------G~i~---------~~~~~l~~l~~l~~~~g~llI~ 285 (476)
.++.+++.. ...+|+++++-... |.+- .-..+++.|...+.++++.+|+
T Consensus 122 ~~e~lirsg--~~~lVVvDSv~al~p~~E~e~~~~~~~~g~~Ar~ms~~lr~lt~~l~~~~~~~i~ 185 (322)
T PF00154_consen 122 IAEQLIRSG--AVDLVVVDSVAALVPKAELEGEIGDQQVGLQARLMSQALRKLTPLLSKSNTTLIF 185 (322)
T ss_dssp HHHHHHHTT--SESEEEEE-CTT-B-HHHHTTSTSSTSSSHHHHHHHHHHHHHHHHHHTTT-EEEE
T ss_pred HHHHHhhcc--cccEEEEecCcccCCHHHHhhccccccCcchHHHHHHHHHHHHHHHHhhceEEEE
Confidence 556666643 56688888754320 1110 0125577777778888887764
No 428
>PHA00008 J DNA packaging protein
Probab=31.02 E-value=32 Score=18.97 Aligned_cols=15 Identities=27% Similarity=0.902 Sum_probs=12.5
Q ss_pred eecCCEEEEcCCCEE
Q 011856 87 SVKGSHMWDIDGNEY 101 (476)
Q Consensus 87 ~~~G~~~~d~dG~~~ 101 (476)
+.+|+++|.+.|..|
T Consensus 11 r~KGARLWYVGGtQf 25 (26)
T PHA00008 11 RRKGARLWYVGGTQF 25 (26)
T ss_pred ccCceEEEEeccEEc
Confidence 689999998888665
No 429
>PF07894 DUF1669: Protein of unknown function (DUF1669); InterPro: IPR012461 This family is composed of sequences derived from hypothetical eukaryotic proteins of unknown function. Some members of this family are annotated as being potential phospholipases but no literature was found to support this.
Probab=30.88 E-value=3.8e+02 Score=25.46 Aligned_cols=49 Identities=12% Similarity=0.327 Sum_probs=33.8
Q ss_pred HHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCC--EEEEecccc
Q 011856 233 VSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGA--LLIFDEVMT 290 (476)
Q Consensus 233 ~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~--llI~DEv~~ 290 (476)
-|.+++.|++. .++.||+++-. ...+.+..|.+.|.+.++ +++.|+...
T Consensus 136 KE~vR~~I~~A-~kVIAIVMD~F--------TD~dIf~DLleAa~kR~VpVYiLLD~~~~ 186 (284)
T PF07894_consen 136 KEVVRRMIQQA-QKVIAIVMDVF--------TDVDIFCDLLEAANKRGVPVYILLDEQNL 186 (284)
T ss_pred HHHHHHHHHHh-cceeEEEeecc--------ccHHHHHHHHHHHHhcCCcEEEEechhcC
Confidence 35566777653 36777777742 344558899999977775 688998774
No 430
>TIGR00789 flhB_rel flhB C-terminus-related protein. This model describes a short protein (80-93 residues) homologous to the C-terminus of the flagellar biosynthetic protein FlhB. It is found so far only in species that also have FlhB. In a phylogenetic tree based on alignment of both this family and the homologous region of FlhB and its homologs, the members of this family form a monophyletic set.
Probab=30.26 E-value=43 Score=25.17 Aligned_cols=22 Identities=23% Similarity=0.318 Sum_probs=19.6
Q ss_pred HHHHHHHHHHhCCEEEEecccc
Q 011856 269 LNAIRRITKENGALLIFDEVMT 290 (476)
Q Consensus 269 l~~l~~l~~~~g~llI~DEv~~ 290 (476)
-++|+++++++|++++.|..-.
T Consensus 29 A~~I~~~A~e~~VPi~~~~~LA 50 (82)
T TIGR00789 29 AERIIEIAKKHGIPIVEDPDLV 50 (82)
T ss_pred HHHHHHHHHHcCCCEEeCHHHH
Confidence 5789999999999999998664
No 431
>cd01821 Rhamnogalacturan_acetylesterase_like Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria.
Probab=30.12 E-value=1.3e+02 Score=26.38 Aligned_cols=50 Identities=22% Similarity=0.331 Sum_probs=29.5
Q ss_pred HHHHHHHHhcCCCCeEEEEEcccCCC----CC-cccCCHHHHHHHHHHHHHhCCEEE
Q 011856 233 VSALENLFENNKGEIAAIILEPVVGN----SG-FIAPKPDFLNAIRRITKENGALLI 284 (476)
Q Consensus 233 ~~~le~~l~~~~~~~a~vi~ep~~~~----~G-~i~~~~~~l~~l~~l~~~~g~llI 284 (476)
++.+-+.+++. ....|++.|.... .+ ....-+.|-+.++++|+++|+.++
T Consensus 96 l~~ii~~~~~~--~~~~il~tp~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~v 150 (198)
T cd01821 96 LRRYIAEARAK--GATPILVTPVTRRTFDEGGKVEDTLGDYPAAMRELAAEEGVPLI 150 (198)
T ss_pred HHHHHHHHHHC--CCeEEEECCccccccCCCCcccccchhHHHHHHHHHHHhCCCEE
Confidence 33333334433 3556677665321 11 122345778899999999998875
No 432
>TIGR00511 ribulose_e2b2 ribose-1,5-bisphosphate isomerase, e2b2 family. The delineation of this family was based originally, in part, on a discussion and neighbor-joining phylogenetic study by Kyrpides and Woese of archaeal and other proteins homologous to the alpha, beta, and delta subunits of eukaryotic initiation factor 2B (eIF-2B), a five-subunit molecule that catalyzes GTP recycling for eIF-2. Recently, Sato, et al. assigned the function ribulose-1,5 bisphosphate isomerase.
Probab=30.04 E-value=5e+02 Score=24.89 Aligned_cols=122 Identities=15% Similarity=0.164 Sum_probs=63.5
Q ss_pred HHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCC--CCCCchhHHhhcCCCCccCCCCCCCCCCC
Q 011856 142 NVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGC--YHGHADPFLVKAGSGVATLGLPDSPGVPK 219 (476)
Q Consensus 142 ~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~--yhg~~~~~~~~~g~~~~~~~~~~~~~~~~ 219 (476)
..+++.-.++..+ ..+++|.|-+..+...++.|.....+-+|++.+.. +.|. ..+-.+... |+
T Consensus 103 ~~I~~~a~~~i~~-g~~ILT~~~S~tv~~~l~~a~~~~~~f~V~v~EsrP~~~G~-~~a~~L~~~-----------gI-- 167 (301)
T TIGR00511 103 ERIGEIGAKRIRD-GDVVMTHCNSEAALSVIKTAFEQGKDIEVIATETRPRKQGH-ITAKELRDY-----------GI-- 167 (301)
T ss_pred HHHHHHHHHHcCC-CCEEEEECCcHHHHHHHHHHHHcCCcEEEEEecCCCcchHH-HHHHHHHHC-----------CC--
Confidence 4555555555543 34677776677777777766444445667766542 3331 111111111 22
Q ss_pred CCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEE-eccc
Q 011856 220 GATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF-DEVM 289 (476)
Q Consensus 220 ~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~-DEv~ 289 (476)
++..++ | .++-..+.+- +...+=.+.+..|||.+.. -+ --.+.-+|+.|++++++ =|.+
T Consensus 168 ----~vtlI~--D-sa~~~~m~~v--d~VivGad~v~~nG~v~nk-iG-T~~lA~~Ak~~~vPv~V~a~~~ 227 (301)
T TIGR00511 168 ----PVTLIV--D-SAVRYFMKEV--DHVVVGADAITANGALINK-IG-TSQLALAAREARVPFMVAAETY 227 (301)
T ss_pred ----CEEEEe--h-hHHHHHHHhC--CEEEECccEEecCCCEEEH-Hh-HHHHHHHHHHhCCCEEEEcccc
Confidence 122222 2 2334445431 2222334778777776644 33 44577789999998775 3444
No 433
>PRK05782 bifunctional sirohydrochlorin cobalt chelatase/precorrin-8X methylmutase; Validated
Probab=29.65 E-value=5.4e+02 Score=25.15 Aligned_cols=43 Identities=16% Similarity=0.229 Sum_probs=23.9
Q ss_pred CCcEEEEEec--HHHHHhhcCCCCccccCCCCCcHHHHHHHHHHHH
Q 011856 319 GLPVGAYGGR--RDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLK 362 (476)
Q Consensus 319 G~~iG~~~~~--~~i~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~ 362 (476)
|+|+|++-+. ++...... ......-++-++++++.++..+.++
T Consensus 287 g~PVGFV~a~esKe~L~~~~-vP~I~~~G~kGGs~vAaa~vNal~~ 331 (335)
T PRK05782 287 ATPPGFTNAKEVKEALIESG-IPSVVLRGTYGGSGIAVAIINELIK 331 (335)
T ss_pred EeCCcccCHHHHHHHHHhCC-CCEEEEecCCCcHHHHHHHHHHHHH
Confidence 6688888442 23222111 1112345677888888777666554
No 434
>cd01422 MGS Methylglyoxal synthase catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The first part of the catalytic mechanism is believed to be similar to TIM (triosephosphate isomerase) in that both enzymes utilize DHAP to form an ene-diolate phosphate intermediate. In MGS, the second catalytic step is characterized by the elimination of phosphate and collapse of the enediolate to form methylglyoxal instead of reprotonation to form the isomer glyceraldehyde 3-phosphate, as in TIM. This is the first reaction in the methylglyoxal bypass of the Embden-Myerhoff glycolytic pathway and is believed to provide physiological benefits under non-ideal growth conditions in bacteria.
Probab=29.02 E-value=2.4e+02 Score=22.56 Aligned_cols=46 Identities=17% Similarity=0.136 Sum_probs=30.8
Q ss_pred HHHHHHHhcCCCCeEEEEEcccC-CCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 011856 234 SALENLFENNKGEIAAIILEPVV-GNSGFIAPKPDFLNAIRRITKENGALLIF 285 (476)
Q Consensus 234 ~~le~~l~~~~~~~a~vi~ep~~-~~~G~i~~~~~~l~~l~~l~~~~g~llI~ 285 (476)
..+.+.+.+. ++.+||..|.. +..+.. .+ -..|++.|-+|+++++.
T Consensus 60 ~~i~~~i~~g--~i~~VInt~~~~~~~~~~--~d--g~~iRr~a~~~~Ip~~T 106 (115)
T cd01422 60 QQIGALIAEG--EIDAVIFFRDPLTAQPHE--PD--VKALLRLCDVYNIPLAT 106 (115)
T ss_pred hHHHHHHHcC--ceeEEEEcCCCCCCCccc--cc--HHHHHHHHHHcCCCEEE
Confidence 4456666653 78888887754 332211 22 56899999999999874
No 435
>KOG1564 consensus DNA repair protein RHP57 [Replication, recombination and repair]
Probab=28.90 E-value=3.4e+02 Score=25.84 Aligned_cols=65 Identities=14% Similarity=0.273 Sum_probs=41.2
Q ss_pred CCCceeeccCCCHHHHHHHHhc------CCCCeEEEEEcccCCC--------CCcccCCHHHH----HHHHHHHHHhCCE
Q 011856 221 ATYETLTAPFNDVSALENLFEN------NKGEIAAIILEPVVGN--------SGFIAPKPDFL----NAIRRITKENGAL 282 (476)
Q Consensus 221 ~~~~~~~~~~~d~~~le~~l~~------~~~~~a~vi~ep~~~~--------~G~i~~~~~~l----~~l~~l~~~~g~l 282 (476)
....++..-.+|++.++..+.. +.+.++.||++++-.. .....+...++ ..|+.++++|+..
T Consensus 176 pgd~IFv~~~~d~d~l~~iv~~qlPiL~~r~~i~LVIiDSVAa~fR~E~d~~~Sdl~~r~~~l~rla~~Lr~LA~~~~~a 255 (351)
T KOG1564|consen 176 PGDHIFVENVHDVDHLLHIVNRQLPILLNRKKIKLVIIDSVAALFRSEFDYNPSDLKKRARHLFRLAGKLRQLASKFDLA 255 (351)
T ss_pred CCceEEEEeccchhhHHHHHhhhccceeccCcceEEEEehhhHHHHHHhccChhhhhhHHHHHHHHHHHHHHHHHhcCcc
Confidence 3445666667799999988864 2346889999986432 11122223333 3567899999987
Q ss_pred EEE
Q 011856 283 LIF 285 (476)
Q Consensus 283 lI~ 285 (476)
+++
T Consensus 256 VV~ 258 (351)
T KOG1564|consen 256 VVC 258 (351)
T ss_pred EEE
Confidence 664
No 436
>PF07905 PucR: Purine catabolism regulatory protein-like family; InterPro: IPR012914 This domain is found in the purine catabolism regulatory protein expressed by Bacillus subtilis (PucR, O32138 from SWISSPROT). PucR is thought to be a transcriptional regulator of genes involved in the purine degradation pathway, and may contain a LysR-like DNA-binding domain. It is similar to LysR-type regulators in that it represses its own expression []. The other members of this family are also putative regulatory proteins.
Probab=28.80 E-value=1.4e+02 Score=24.09 Aligned_cols=47 Identities=19% Similarity=0.165 Sum_probs=28.7
Q ss_pred CHHHHHHHHhc-CCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 011856 232 DVSALENLFEN-NKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 285 (476)
Q Consensus 232 d~~~le~~l~~-~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~ 285 (476)
+.+.+.+.+++ .....+++.+....... -.| +++.++|++++++||.
T Consensus 57 ~~~~~~~~i~~L~~~~~agL~i~~~~~~~--~iP-----~~~i~~A~~~~lPli~ 104 (123)
T PF07905_consen 57 DEEELREFIRELAEKGAAGLGIKTGRYLD--EIP-----EEIIELADELGLPLIE 104 (123)
T ss_pred CHHHHHHHHHHHHHCCCeEEEEeccCccc--cCC-----HHHHHHHHHcCCCEEE
Confidence 44555555543 11257777776532211 233 6689999999999884
No 437
>cd03320 OSBS o-Succinylbenzoate synthase (OSBS) catalyzes the conversion of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC) to 4-(2'-carboxyphenyl)-4-oxobutyrate (o-succinylbenzoate or OSB), a reaction in the menaquinone biosynthetic pathway. Menaquinone is an essential cofactor for anaerobic growth in eubacteria and some archaea. OSBS belongs to the enolase superfamily of enzymes, characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion.
Probab=28.69 E-value=4.8e+02 Score=24.23 Aligned_cols=147 Identities=17% Similarity=0.185 Sum_probs=73.2
Q ss_pred CCCCcHHHHHHHHHHHHhcCC-----CCCCC-HHHHHHHHHHHhhCCCCCeEEE-eCCHHHHHHHHHHHHHhccCCceEE
Q 011856 113 IGHADDQVLAALGETMKKGTS-----FGAPC-LLENVLAEMVISAVPSIEMVRF-VNSGTEACMGVLRLARAFTGRERII 185 (476)
Q Consensus 113 lG~~~p~v~~a~~~~l~~~~~-----~~~~~-~~~~~la~~l~~~~~~~e~v~~-~~sGseA~~~al~~ar~~~~~~~ii 185 (476)
++...++..+.+.+..+.|.. .+... +...+.-+.+.+.+++.-.+.+ .|.+. ....|++.++.+.. .++.
T Consensus 79 ~~~~~~~~~~~~~~~~~~Gf~~~KiKvg~~~~~~d~~~v~~vr~~~g~~~~l~vDaN~~w-~~~~A~~~~~~l~~-~~i~ 156 (263)
T cd03320 79 LPAGDAAALGEAKAAYGGGYRTVKLKVGATSFEEDLARLRALREALPADAKLRLDANGGW-SLEEALAFLEALAA-GRIE 156 (263)
T ss_pred ecCCCHHHHHHHHHHHhCCCCEEEEEECCCChHHHHHHHHHHHHHcCCCCeEEEeCCCCC-CHHHHHHHHHhhcc-cCCc
Confidence 344444555555555554421 11111 3334555666666643334444 55554 34567776666543 3455
Q ss_pred EEeCCCCCC-chhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccC
Q 011856 186 KFEGCYHGH-ADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAP 264 (476)
Q Consensus 186 ~~~~~yhg~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~ 264 (476)
.++...... ........ . . .|...+ +. ..++.++.++++.. ....+.+.+.. .|.+..
T Consensus 157 ~iEqP~~~~d~~~~~~l~-~---~--~PIa~d-------Es----~~~~~~~~~~~~~~--~~d~v~~k~~~--~GGit~ 215 (263)
T cd03320 157 YIEQPLPPDDLAELRRLA-A---G--VPIALD-------ES----LRRLDDPLALAAAG--ALGALVLKPAL--LGGPRA 215 (263)
T ss_pred eEECCCChHHHHHHHHhh-c---C--CCeeeC-------Cc----cccccCHHHHHhcC--CCCEEEECchh--cCCHHH
Confidence 555544422 12221111 0 0 111111 00 01345566677642 35566667653 344555
Q ss_pred CHHHHHHHHHHHHHhCCEEEEe
Q 011856 265 KPDFLNAIRRITKENGALLIFD 286 (476)
Q Consensus 265 ~~~~l~~l~~l~~~~g~llI~D 286 (476)
..++.++|+++|+.+++-
T Consensus 216 ----~~~i~~~a~~~gi~~~~~ 233 (263)
T cd03320 216 ----LLELAEEARARGIPAVVS 233 (263)
T ss_pred ----HHHHHHHHHHcCCCEEEE
Confidence 789999999999988764
No 438
>TIGR00416 sms DNA repair protein RadA. The gene protuct codes for a probable ATP-dependent protease involved in both DNA repair and degradation of proteins, peptides, glycopeptides. Also known as sms. Residues 11-28 of the SEED alignment contain a putative Zn binding domain. Residues 110-117 of the seed contain a putative ATP binding site both documented in Haemophilus and in Listeria monocytogenes. for E.coli see ( J. BACTERIOL. 178:5045-5048(1996)).
Probab=28.24 E-value=1.2e+02 Score=30.99 Aligned_cols=56 Identities=11% Similarity=0.173 Sum_probs=36.6
Q ss_pred eccCCCHHHHHHHHhcCCCCeEEEEEcccCCCC--------CcccCCHHHHHHHHHHHHHhCCEEE
Q 011856 227 TAPFNDVSALENLFENNKGEIAAIILEPVVGNS--------GFIAPKPDFLNAIRRITKENGALLI 284 (476)
Q Consensus 227 ~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~--------G~i~~~~~~l~~l~~l~~~~g~llI 284 (476)
.+...+++.+.+.+++. +...|++++++... |...--.+++..|.++++++|+.++
T Consensus 153 ~~~e~~~~~I~~~i~~~--~~~~vVIDSIq~l~~~~~~~~~g~~~q~r~~~~~L~~~ak~~giTvl 216 (454)
T TIGR00416 153 VLSETNWEQICANIEEE--NPQACVIDSIQTLYSPDISSAPGSVSQVRECTAELMRLAKTRGIAIF 216 (454)
T ss_pred EcCCCCHHHHHHHHHhc--CCcEEEEecchhhcccccccCCCCHHHHHHHHHHHHHHHHHhCCEEE
Confidence 33445788888888764 56789999987531 1111123456678899999997544
No 439
>PF13872 AAA_34: P-loop containing NTP hydrolase pore-1
Probab=27.71 E-value=39 Score=32.28 Aligned_cols=22 Identities=18% Similarity=0.416 Sum_probs=19.0
Q ss_pred HHHHHHHH-HHhCCEEEEecccc
Q 011856 269 LNAIRRIT-KENGALLIFDEVMT 290 (476)
Q Consensus 269 l~~l~~l~-~~~g~llI~DEv~~ 290 (476)
|+.|.++| +.++.++|+||.|-
T Consensus 161 l~ql~~W~g~dfdgvivfDEcH~ 183 (303)
T PF13872_consen 161 LDQLVDWCGEDFDGVIVFDECHK 183 (303)
T ss_pred HHHHHHHHhcCCCceEEeccchh
Confidence 89999999 45788999999993
No 440
>TIGR00140 hupD hydrogenase expression/formation protein. C at 64 and 67 are believed to be metal binding. Postulated to be involved in processing or hydrogenase. Superfamily suggests that it is a peptidase/protease.
Probab=27.62 E-value=3.4e+02 Score=22.14 Aligned_cols=47 Identities=17% Similarity=0.231 Sum_probs=32.7
Q ss_pred HHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCC
Q 011856 143 VLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHG 193 (476)
Q Consensus 143 ~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg 193 (476)
+++++|.+.++.++.|.+-.+|+...+.+-.+ .+.+.+|+.|...-|
T Consensus 2 ~v~~~L~~~~~~~~~v~vid~gt~~~~l~~~l----~~~d~viiVDA~~~g 48 (134)
T TIGR00140 2 RLVEALQQRYAFPDNVTLLDGGTQGLYLLPLI----ESADRLIILDAVDYG 48 (134)
T ss_pred HHHHHHHHhCCCCCCeEEEecCccHHHHHHHH----hcCCeEEEEecccCC
Confidence 45677776664456787888888887777664 366788888876544
No 441
>cd03324 rTSbeta_L-fuconate_dehydratase Human rTS beta is encoded by the rTS gene which, through alternative RNA splicing, also encodes rTS alpha whose mRNA is complementary to thymidylate synthase mRNA. rTS beta expression is associated with the production of small molecules that appear to mediate the down-regulation of thymidylate synthase protein by a novel intercellular signaling mechanism. A member of this family, from Xanthomonas, has been characterized to be a L-fuconate dehydratase. rTS beta belongs to the enolase superfamily of enzymes, characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion.
Probab=27.58 E-value=6.5e+02 Score=25.40 Aligned_cols=150 Identities=11% Similarity=0.080 Sum_probs=74.4
Q ss_pred CCCcHHHHHHHHHHHHhcCC-----CCCCCHHHHHHHHHHHhhCCCCCeEEE-eCCHHHHHHHHHHHHHhccCCceEEEE
Q 011856 114 GHADDQVLAALGETMKKGTS-----FGAPCLLENVLAEMVISAVPSIEMVRF-VNSGTEACMGVLRLARAFTGRERIIKF 187 (476)
Q Consensus 114 G~~~p~v~~a~~~~l~~~~~-----~~~~~~~~~~la~~l~~~~~~~e~v~~-~~sGseA~~~al~~ar~~~~~~~ii~~ 187 (476)
|..++++.+.+.+..++|.. .+...+...+..+.+.+.++..-.+++ .|.+.. ...|+++++.+.. -++..+
T Consensus 194 ~~~~~~~~~~a~~~~~~Gf~~~KiKvg~~~~~d~~~v~avRe~vG~~~~L~vDaN~~w~-~~~A~~~~~~L~~-~~l~~i 271 (415)
T cd03324 194 GYSDEKLRRLCKEALAQGFTHFKLKVGADLEDDIRRCRLAREVIGPDNKLMIDANQRWD-VPEAIEWVKQLAE-FKPWWI 271 (415)
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHHHHhcCCCCeEEEECCCCCC-HHHHHHHHHHhhc-cCCCEE
Confidence 45566777777666665431 111222334555666666643224444 555544 3567777766643 345555
Q ss_pred eCCCCCCchhHH-hhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCH
Q 011856 188 EGCYHGHADPFL-VKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKP 266 (476)
Q Consensus 188 ~~~yhg~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~ 266 (476)
+...+......+ .+... ......|...+ +. ..+..+++++++.. ....+-+++. ..|.+..
T Consensus 272 EEP~~~~d~~~~~~L~~~-~~~~~iPIa~g-------Es----~~~~~~~~~ll~~~--a~dil~~d~~--~~GGit~-- 333 (415)
T cd03324 272 EEPTSPDDILGHAAIRKA-LAPLPIGVATG-------EH----CQNRVVFKQLLQAG--AIDVVQIDSC--RLGGVNE-- 333 (415)
T ss_pred ECCCCCCcHHHHHHHHHh-cccCCCceecC-------Cc----cCCHHHHHHHHHcC--CCCEEEeCcc--ccCCHHH--
Confidence 555544322222 11111 00000111111 00 01567778888643 3344444443 3344555
Q ss_pred HHHHHHHHHHHHhCCEEEE
Q 011856 267 DFLNAIRRITKENGALLIF 285 (476)
Q Consensus 267 ~~l~~l~~l~~~~g~llI~ 285 (476)
..++.++|+++|+.+..
T Consensus 334 --~~kia~lA~a~gi~~~p 350 (415)
T cd03324 334 --NLAVLLMAAKFGVPVCP 350 (415)
T ss_pred --HHHHHHHHHHcCCeEEE
Confidence 78899999999987643
No 442
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=27.39 E-value=1.1e+02 Score=26.45 Aligned_cols=19 Identities=26% Similarity=0.307 Sum_probs=15.3
Q ss_pred HHHHHHHHHHHHHhCCEEE
Q 011856 266 PDFLNAIRRITKENGALLI 284 (476)
Q Consensus 266 ~~~l~~l~~l~~~~g~llI 284 (476)
..+-+.++++|+++|+.+|
T Consensus 134 ~~~~~~~~~~a~~~~~~~v 152 (188)
T cd01827 134 KEIQPMIDKIAKKLNLKLI 152 (188)
T ss_pred HHHHHHHHHHHHHcCCcEE
Confidence 3466788999999998776
No 443
>smart00545 JmjN Small domain found in the jumonji family of transcription factors. To date, this domain always co-occurs with the JmjC domain (although the reverse is not true).
Probab=27.12 E-value=78 Score=20.35 Aligned_cols=22 Identities=14% Similarity=0.265 Sum_probs=17.8
Q ss_pred CCHHHHHHHHHHHHHhCCEEEE
Q 011856 264 PKPDFLNAIRRITKENGALLIF 285 (476)
Q Consensus 264 ~~~~~l~~l~~l~~~~g~llI~ 285 (476)
.+-+|++.|.+++++||+.=|+
T Consensus 14 Dp~~yi~~i~~~~~~yGi~KIv 35 (42)
T smart00545 14 DPLAYISKIRPQAEKYGICKVV 35 (42)
T ss_pred CHHHHHHHHHHHHhhCCEEEEE
Confidence 4567899999999999987654
No 444
>cd04923 ACT_AK-LysC-DapG-like_2 ACT domains of the lysine-sensitive aspartokinase isoenzyme AKII of Bacillus subtilis (BS) strain 168 and related domains. This CD includes the C-terminal of the two ACT domains of the lysine-sensitive aspartokinase isoenzyme AKII of Bacillus subtilis (BS) strain 168, and the lysine plus threonine-sensitive aspartokinase of Corynebacterium glutamicum, as well as, the second and fourth, of four, ACT domains present in cyanobacteria AK. Also included are the C-terminal of the two ACT domains of the diaminopimelate-sensitive aspartokinase isoenzyme AKI found in Bacilli (B. subtilis strain 168), Clostridia, and Actinobacteria bacterial species. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=26.99 E-value=1.3e+02 Score=20.27 Aligned_cols=45 Identities=16% Similarity=0.187 Sum_probs=31.6
Q ss_pred HHHHHHHHHHCCeEeccCCCcceEEeCCCcHHHHHHHHHHHHHHH
Q 011856 427 FARFYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHTITAAEKVK 471 (476)
Q Consensus 427 ~~~~~~~l~~~Gv~~~~~~~~~~~~~~~~t~e~i~~~~~~l~~~~ 471 (476)
..++...|.+.|+-+.........+++...+++.++++.+|.+.+
T Consensus 17 ~~~i~~~L~~~~i~v~~i~~s~~~is~~v~~~~~~~~~~~l~~~l 61 (63)
T cd04923 17 AAKMFKALAEAGINIEMISTSEIKISCLVDEDDAEKAVRALHEAF 61 (63)
T ss_pred HHHHHHHHHHCCCCEEEEEccCCeEEEEEeHHHHHHHHHHHHHHh
Confidence 456778888888755433222356777888899999988888765
No 445
>COG1307 DegV Uncharacterized protein conserved in bacteria [Function unknown]
Probab=26.85 E-value=5.5e+02 Score=24.34 Aligned_cols=53 Identities=11% Similarity=0.113 Sum_probs=29.6
Q ss_pred HHHHHHHHhhCC-CCCeEEE--eCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCC
Q 011856 142 NVLAEMVISAVP-SIEMVRF--VNSGTEACMGVLRLARAFTGRERIIKFEGCYHGH 194 (476)
Q Consensus 142 ~~la~~l~~~~~-~~e~v~~--~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~ 194 (476)
.++.+.+.+... +.++|++ .+|+-.+...+.++|+.+..+.+|.++|...-+.
T Consensus 67 ~~~~~~~~~l~~~g~~~vi~i~iSs~LSgty~~a~~a~~~~~~~~v~viDS~~~s~ 122 (282)
T COG1307 67 GEFEELFEKLLQKGYDEVISIHISSGLSGTYQSAQLAAELVEGAKVHVIDSKSVSM 122 (282)
T ss_pred HHHHHHHHHHHhCCCcEEEEEEcCCCccHHHHHHHHHHHhccCceEEEEcCcchhh
Confidence 444444444443 3445543 3555555555566665666666788887665443
No 446
>PF00926 DHBP_synthase: 3,4-dihydroxy-2-butanone 4-phosphate synthase; InterPro: IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase (4.1.99.12 from EC) (DHBP synthase) (RibB) catalyses the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate, the latter serving as the biosynthetic precursor for the xylene ring of riboflavin []. In Photobacterium leiognathi, the riboflavin synthesis genes ribB (DHBP synthase), ribE (riboflavin synthase), ribH (lumazone synthase) and ribA (GTP cyclohydrolase II) all reside in the lux operon []. RibB is sometimes found as a bifunctional enzyme with GTP cyclohydrolase II that catalyses the first committed step in the biosynthesis of riboflavin (IPR000926 from INTERPRO). No sequences with significant homology to DHBP synthase are found in the metazoa.; GO: 0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity, 0009231 riboflavin biosynthetic process; PDB: 1K4O_A 1K4L_A 1K4P_A 1K49_A 1K4I_A 1TKU_A 1TKS_B 2RIS_A 2RIU_A 3MIO_A ....
Probab=26.79 E-value=1.6e+02 Score=26.28 Aligned_cols=35 Identities=20% Similarity=0.281 Sum_probs=27.6
Q ss_pred CeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 011856 246 EIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 285 (476)
Q Consensus 246 ~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~ 285 (476)
..+++++|=+.. .|.... ++++.+++++||+.+|.
T Consensus 152 ~p~avi~eil~~-dG~~~~----~~~~~~fA~~~~l~~vs 186 (194)
T PF00926_consen 152 SPVAVICEILDD-DGDMAR----RDELEEFAKKHGLPIVS 186 (194)
T ss_dssp -SBEEEEEBBET-TSSBHC----HHHHHHHHHHTT-EEEE
T ss_pred CCcEEEEEEeCC-CCCcCC----HHHHHHHHHHcCCcEEE
Confidence 567888887755 677887 88999999999999884
No 447
>PF04726 Microvir_J: Microvirus J protein; InterPro: IPR006815 This small protein is involved in DNA packaging, interacting with DNA via its hydrophobic C terminus. In bacteriophage phi-X174, J is present in 60 copies, and forms an S-shaped polypeptide chain without any secondary structure. It is thought to interact with DNA through simple charge interactions [].; GO: 0003677 DNA binding, 0019073 viral DNA genome packaging, 0019028 viral capsid; PDB: 1M06_J 1GFF_3 1RB8_J 2BPA_3.
Probab=26.56 E-value=27 Score=18.78 Aligned_cols=16 Identities=25% Similarity=0.854 Sum_probs=6.6
Q ss_pred EeecCCEEEEcCCCEE
Q 011856 86 DSVKGSHMWDIDGNEY 101 (476)
Q Consensus 86 ~~~~G~~~~d~dG~~~ 101 (476)
.+.+|+++|.+.|..|
T Consensus 9 ~~~kgarlwyvgg~qf 24 (24)
T PF04726_consen 9 GKRKGARLWYVGGTQF 24 (24)
T ss_dssp -SSSSS----SSS---
T ss_pred CccCceEEEEecceeC
Confidence 3688999998877653
No 448
>TIGR02012 tigrfam_recA protein RecA. This model describes orthologs of the recA protein. RecA promotes hybridization of homolgous regions of DNA. A segment of ssDNA can be hybridized to another ssDNA region, or to a dsDNA region. ATP is hydrolyzed in the process. Part of the SOS respones, it is regulated by LexA via autocatalytic cleavage.
Probab=26.47 E-value=4e+02 Score=25.90 Aligned_cols=23 Identities=13% Similarity=0.277 Sum_probs=15.8
Q ss_pred HHHHHHHHHHHHhCCEEEE-eccc
Q 011856 267 DFLNAIRRITKENGALLIF-DEVM 289 (476)
Q Consensus 267 ~~l~~l~~l~~~~g~llI~-DEv~ 289 (476)
.+|..|..+++++|+.+|+ .+++
T Consensus 169 ~~lr~L~~~l~~~~~tvi~tNQvr 192 (321)
T TIGR02012 169 QALRKLTGALSKSNTTAIFINQIR 192 (321)
T ss_pred HHHHHHHHHHHhCCCEEEEEecce
Confidence 3577788888889987654 4444
No 449
>cd00984 DnaB_C DnaB helicase C terminal domain. The hexameric helicase DnaB unwinds the DNA duplex at the chromosome replication fork. Although the mechanism by which DnaB both couples ATP hydrolysis to translocation along DNA and denatures the duplex is unknown, a change in the quaternary structure of the protein involving dimerization of the N-terminal domain has been observed and may occur during the enzymatic cycle. This C-terminal domain contains an ATP-binding site and is therefore probably the site of ATP hydrolysis.
Probab=26.40 E-value=1.7e+02 Score=26.65 Aligned_cols=54 Identities=11% Similarity=0.126 Sum_probs=33.6
Q ss_pred CHHHHHHHHhcC--CCCeEEEEEcccCCC-CCc-ccCC----HHHHHHHHHHHHHhCCEEEE
Q 011856 232 DVSALENLFENN--KGEIAAIILEPVVGN-SGF-IAPK----PDFLNAIRRITKENGALLIF 285 (476)
Q Consensus 232 d~~~le~~l~~~--~~~~a~vi~ep~~~~-~G~-i~~~----~~~l~~l~~l~~~~g~llI~ 285 (476)
+++.+++.++.. ...+..|++++.+.. .+. .... ..+++.|+++|+++|+.+|+
T Consensus 107 ~~~~l~~~i~~~~~~~~~~~vvID~l~~l~~~~~~~~~~~~~~~~~~~L~~la~~~~~~ii~ 168 (242)
T cd00984 107 TVSDIRSRARRLKKEHGLGLIVIDYLQLMSGSKKKGNRQQEVAEISRSLKLLAKELNVPVIA 168 (242)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCchhcCCCCCCCCHHHHHHHHHHHHHHHHHHhCCeEEE
Confidence 466665555321 116788999998743 111 0111 24578899999999998775
No 450
>COG0742 N6-adenine-specific methylase [DNA replication, recombination, and repair]
Probab=26.00 E-value=2.5e+02 Score=24.87 Aligned_cols=79 Identities=19% Similarity=0.238 Sum_probs=42.0
Q ss_pred EcCCCEEEecccChhhccCCCCcHHHHHHHHHHHHhcCCCC----CCCHHHHHHHHHHHhhCCCCCeEEEeCCHHHHHHH
Q 011856 95 DIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFG----APCLLENVLAEMVISAVPSIEMVRFVNSGTEACMG 170 (476)
Q Consensus 95 d~dG~~~iD~~~~~~~~~lG~~~p~v~~a~~~~l~~~~~~~----~~~~~~~~la~~l~~~~~~~e~v~~~~sGseA~~~ 170 (476)
+.+|..+||+.+|.|+. | . |++.+|.... ........+.+-+...-...+..++-+... .
T Consensus 41 ~i~g~~~LDlFAGSGaL--G------l----EAlSRGA~~~~~vE~~~~a~~~l~~N~~~l~~~~~~~~~~~da~----~ 104 (187)
T COG0742 41 EIEGARVLDLFAGSGAL--G------L----EALSRGAARVVFVEKDRKAVKILKENLKALGLEGEARVLRNDAL----R 104 (187)
T ss_pred ccCCCEEEEecCCccHh--H------H----HHHhCCCceEEEEecCHHHHHHHHHHHHHhCCccceEEEeecHH----H
Confidence 47899999999986543 3 2 4455543221 123333444444433321233444444333 3
Q ss_pred HHHHHHhccCC--ceEEEEeCCCC
Q 011856 171 VLRLARAFTGR--ERIIKFEGCYH 192 (476)
Q Consensus 171 al~~ar~~~~~--~~ii~~~~~yh 192 (476)
+++ ....+ -++|..|+.|+
T Consensus 105 ~L~---~~~~~~~FDlVflDPPy~ 125 (187)
T COG0742 105 ALK---QLGTREPFDLVFLDPPYA 125 (187)
T ss_pred HHH---hcCCCCcccEEEeCCCCc
Confidence 333 33344 68899999997
No 451
>cd07576 R-amidase_like Pseudomonas sp. MCI3434 R-amidase and related proteins (putative class 13 nitrilases). Pseudomonas sp. MCI3434 R-amidase hydrolyzes (R,S)-piperazine-2-tert-butylcarboxamide to form (R)-piperazine-2-carboxylic acid. It does so with strict R-stereoselectively. Its preferred substrates are carboxamide compounds which have the amino or imino group connected to their beta- or gamma-carbon. This subgroup belongs to a larger nitrilase superfamily comprised of nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes, which depend on a Glu-Lys-Cys catalytic triad. This superfamily has been classified in the literature based on global and structure based sequence analysis into thirteen different enzyme classes (referred to as 1-13), class 13 represents proteins that at the time were difficult to place in a distinct similarity group. It has been suggested that this subgroup represents a new class. Members of the nitrilase superfamily generally form homomeric compl
Probab=25.97 E-value=92 Score=28.67 Aligned_cols=53 Identities=17% Similarity=0.292 Sum_probs=31.0
Q ss_pred HHHHHHHHhcCCCCeEEEEEcccCCCCCccc----------CCHHHHHHHHHHHHHhCCEEEE
Q 011856 233 VSALENLFENNKGEIAAIILEPVVGNSGFIA----------PKPDFLNAIRRITKENGALLIF 285 (476)
Q Consensus 233 ~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~----------~~~~~l~~l~~l~~~~g~llI~ 285 (476)
++.+++.+++....-+-+++-|-...+|... ...++++.|+++++++++.+|+
T Consensus 18 ~~~i~~~i~~a~~~ga~lvv~PE~~l~g~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~ii~ 80 (254)
T cd07576 18 LARLDEAAARAAAAGADLLVFPELFLTGYNIGDAVARLAEPADGPALQALRAIARRHGIAIVV 80 (254)
T ss_pred HHHHHHHHHHHHHcCCCEEEccCccccCCCCcchhhhhhcccCChHHHHHHHHHHHcCCEEEE
Confidence 4555555543211223355555444444322 2345799999999999998875
No 452
>cd04917 ACT_AKiii-LysC-EC_2 ACT domains located C-terminal to the catalytic domain of the lysine-sensitive aspartokinase isoenzyme AKIII. This CD includes the second of two ACT domains located C-terminal to the catalytic domain of the lysine-sensitive aspartokinase isoenzyme AKIII, a monofunctional class enzyme found in bacteria (Escherichia coli (EC) LysC). Aspartokinase is the first enzyme in the aspartate metabolic pathway and catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. The E. coli AKIII (LysC) binds two feedback allosteric inhibitor lysine molecules at the dimer interface located between the ACT1 domain of two subunits. The second ACT domain (ACT2), this CD, is not involved in the binding of heterotrophic effectors. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=25.96 E-value=1.7e+02 Score=20.12 Aligned_cols=45 Identities=7% Similarity=-0.006 Sum_probs=32.0
Q ss_pred HHHHHHHHHHCCeEeccCCCcceEEeCCCcHHHHHHHHHHHHHHH
Q 011856 427 FARFYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHTITAAEKVK 471 (476)
Q Consensus 427 ~~~~~~~l~~~Gv~~~~~~~~~~~~~~~~t~e~i~~~~~~l~~~~ 471 (476)
..++...|.+.++.+...+.....+++...+++.++++.+|.+.+
T Consensus 18 ~~~i~~~L~~i~i~~i~~~~s~~~is~~V~~~~~~~a~~~Lh~~f 62 (64)
T cd04917 18 EKRIFDALEDINVRMICYGASNHNLCFLVKEEDKDEVVQRLHSRL 62 (64)
T ss_pred HHHHHHHHHhCCeEEEEEecCccEEEEEEeHHHHHHHHHHHHHHH
Confidence 356666676667765444444567788889999999999987754
No 453
>TIGR00506 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase. Several members of the family are bifunctional, involving both ribA and ribB function. In these cases, ribA tends to be on the C-terminal end of the protein and ribB tends to be on the N-terminal.
Probab=25.88 E-value=1.8e+02 Score=25.98 Aligned_cols=35 Identities=23% Similarity=0.221 Sum_probs=28.3
Q ss_pred CeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 011856 246 EIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 285 (476)
Q Consensus 246 ~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~ 285 (476)
..+++|||=+.. .|.... .+++.+++++||+.+|.
T Consensus 157 ~p~~vicEil~~-dG~m~~----~~~~~~fA~~~~l~~is 191 (199)
T TIGR00506 157 KPAGVICEMMND-DGTMAR----KPELMEYAKKHNLKLIS 191 (199)
T ss_pred CceEEEEEEeCC-CCCccC----HHHHHHHHHHcCCcEEE
Confidence 457888887654 677777 88899999999999873
No 454
>PRK13602 putative ribosomal protein L7Ae-like; Provisional
Probab=25.80 E-value=2.8e+02 Score=20.64 Aligned_cols=45 Identities=7% Similarity=0.218 Sum_probs=30.0
Q ss_pred HHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEec
Q 011856 233 VSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDE 287 (476)
Q Consensus 233 ~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DE 287 (476)
.+...+.+++. +..+|++-..- ++...+.+.++|+++++.++.-+
T Consensus 16 ~~~v~kai~~g--kaklViiA~D~--------~~~~~~~i~~~c~~~~Vp~~~~~ 60 (82)
T PRK13602 16 TKQTVKALKRG--SVKEVVVAEDA--------DPRLTEKVEALANEKGVPVSKVD 60 (82)
T ss_pred HHHHHHHHHcC--CeeEEEEECCC--------CHHHHHHHHHHHHHcCCCEEEEC
Confidence 45566666643 56666664432 22458999999999999987543
No 455
>cd04936 ACT_AKii-LysC-BS-like_2 ACT domains of the lysine-sensitive, aspartokinase (AK) isoenzyme AKII of Bacillus subtilis (BS) strain 168 and related domains. This CD includes the C-terminal of the two ACT domains of the lysine-sensitive, aspartokinase (AK) isoenzyme AKII of Bacillus subtilis (BS) strain 168, and the lysine plus threonine-sensitive aspartokinase of Corynebacterium glutamicum, and related sequences. In B. subtilis strain 168, the regulation of the diaminopimelate (Dap)-lysine biosynthetic pathway involves dual control by Dap and lysine, effected through separate Dap- and lysine-sensitive AK isoenzymes. The B. subtilis strain 168 AKII is induced by methionine and repressed and inhibited by lysine. Although C. glutamicum is known to contain a single AK, both the succinylase and dehydrogenase variant pathways of DAP-lysine synthesis operate simultaneously in this organism. In corynebacteria and other various Gram-positive bacteria, the DAP-lysine pathway is feedback regu
Probab=25.75 E-value=1.4e+02 Score=20.05 Aligned_cols=45 Identities=16% Similarity=0.169 Sum_probs=31.4
Q ss_pred HHHHHHHHHHCCeEeccCCCcceEEeCCCcHHHHHHHHHHHHHHH
Q 011856 427 FARFYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHTITAAEKVK 471 (476)
Q Consensus 427 ~~~~~~~l~~~Gv~~~~~~~~~~~~~~~~t~e~i~~~~~~l~~~~ 471 (476)
..++...|.+.|+-+.-.......+++...+++.+.+++.|.+.+
T Consensus 17 ~~~i~~~L~~~~i~v~~i~~s~~~is~~v~~~d~~~~~~~l~~~~ 61 (63)
T cd04936 17 AAKMFEALAEAGINIEMISTSEIKISCLIDEDDAEKAVRALHEAF 61 (63)
T ss_pred HHHHHHHHHHCCCcEEEEEccCceEEEEEeHHHHHHHHHHHHHHh
Confidence 456778888888654333222356677888899999888887765
No 456
>cd01123 Rad51_DMC1_radA Rad51_DMC1_radA,B. This group of recombinases includes the eukaryotic proteins RAD51, RAD55/57 and the meiosis-specific protein DMC1, and the archaeal proteins radA and radB. They are closely related to the bacterial RecA group. Rad51 proteins catalyze a similiar recombination reaction as RecA, using ATP-dependent DNA binding activity and a DNA-dependent ATPase. However, this reaction is less efficient and requires accessory proteins such as RAD55/57 .
Probab=25.49 E-value=1.1e+02 Score=27.74 Aligned_cols=53 Identities=17% Similarity=0.340 Sum_probs=31.3
Q ss_pred HHHHHhcCCCCeEEEEEcccCCCC-CcccCC----------HHHHHHHHHHHHHhCCEEE-Eeccc
Q 011856 236 LENLFENNKGEIAAIILEPVVGNS-GFIAPK----------PDFLNAIRRITKENGALLI-FDEVM 289 (476)
Q Consensus 236 le~~l~~~~~~~a~vi~ep~~~~~-G~i~~~----------~~~l~~l~~l~~~~g~llI-~DEv~ 289 (476)
+++.+.+. +.+..|+++++..-- ...... .+++..|..+|+++++.+| ..++.
T Consensus 106 l~~~l~~~-~~~~liVIDSis~~~~~~~~~~~~~~~r~~~l~~~~~~L~~la~~~~~avl~tn~~~ 170 (235)
T cd01123 106 LEAILIES-SRIKLVIVDSVTALFRAEFDGRGELAERQQHLAKLLRTLKRLADEFNVAVVITNQVT 170 (235)
T ss_pred HHHHHhhc-CCeeEEEEeCcHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHhCCEEEEeccEe
Confidence 34444443 268899999986421 001111 2456778889999998765 44443
No 457
>cd03316 MR_like Mandelate racemase (MR)-like subfamily of the enolase superfamily. Enzymes of this subgroup share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and conserved catalytic residues, a Lys-X-Lys motif and a conserved histidine-aspartate dyad. Members of the MR subgroup are mandelate racemase, D-glucarate/L-idarate dehydratase (GlucD), D-altronate/D-mannonate dehydratase , D-galactonate dehydratase (GalD) , D-gluconate dehydratase (GlcD), and L-rhamnonate dehydratase (RhamD).
Probab=25.11 E-value=6.5e+02 Score=24.53 Aligned_cols=144 Identities=17% Similarity=0.165 Sum_probs=72.6
Q ss_pred cHHHHHHHHHHHHhcCC-----CCCCC------HHHHHHHHHHHhhCCCCCeEEE-eCCHHHHHHHHHHHHHhccCCceE
Q 011856 117 DDQVLAALGETMKKGTS-----FGAPC------LLENVLAEMVISAVPSIEMVRF-VNSGTEACMGVLRLARAFTGRERI 184 (476)
Q Consensus 117 ~p~v~~a~~~~l~~~~~-----~~~~~------~~~~~la~~l~~~~~~~e~v~~-~~sGseA~~~al~~ar~~~~~~~i 184 (476)
..++.+++.+..+.|.. .+... +...+.-+.+.+.++..-.+.+ .|++. ..+.|+++++.+..- .+
T Consensus 140 ~~~~~~~a~~~~~~Gf~~~Kik~g~~~~~~~~~~~d~~~v~~ir~~~g~~~~l~vDaN~~~-~~~~a~~~~~~l~~~-~i 217 (357)
T cd03316 140 PEELAEEAKRAVAEGFTAVKLKVGGPDSGGEDLREDLARVRAVREAVGPDVDLMVDANGRW-DLAEAIRLARALEEY-DL 217 (357)
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCCCcchHHHHHHHHHHHHHHHhhCCCCEEEEECCCCC-CHHHHHHHHHHhCcc-CC
Confidence 45677777766665521 12111 3334555666666642224444 45554 356677776665432 34
Q ss_pred EEEeCCCCCC-chhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCccc
Q 011856 185 IKFEGCYHGH-ADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIA 263 (476)
Q Consensus 185 i~~~~~yhg~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~ 263 (476)
..++...+.. ........... . .|...+ + ...++++++++++.. ....|-+.+.. .|.+.
T Consensus 218 ~~iEqP~~~~~~~~~~~l~~~~--~--ipi~~d-------E----~~~~~~~~~~~i~~~--~~d~v~~k~~~--~GGi~ 278 (357)
T cd03316 218 FWFEEPVPPDDLEGLARLRQAT--S--VPIAAG-------E----NLYTRWEFRDLLEAG--AVDIIQPDVTK--VGGIT 278 (357)
T ss_pred CeEcCCCCccCHHHHHHHHHhC--C--CCEEec-------c----ccccHHHHHHHHHhC--CCCEEecCccc--cCCHH
Confidence 4454444322 22221111110 0 110000 0 012688899998753 33444445433 34455
Q ss_pred CCHHHHHHHHHHHHHhCCEEEE
Q 011856 264 PKPDFLNAIRRITKENGALLIF 285 (476)
Q Consensus 264 ~~~~~l~~l~~l~~~~g~llI~ 285 (476)
. ..++.++|+++|+.++.
T Consensus 279 ~----~~~i~~~a~~~g~~~~~ 296 (357)
T cd03316 279 E----AKKIAALAEAHGVRVAP 296 (357)
T ss_pred H----HHHHHHHHHHcCCeEec
Confidence 5 78899999999987654
No 458
>PRK11823 DNA repair protein RadA; Provisional
Probab=24.91 E-value=1.5e+02 Score=30.30 Aligned_cols=55 Identities=11% Similarity=0.264 Sum_probs=35.7
Q ss_pred cCCCHHHHHHHHhcCCCCeEEEEEcccCCCC--------CcccCCHHHHHHHHHHHHHhCCEEEE
Q 011856 229 PFNDVSALENLFENNKGEIAAIILEPVVGNS--------GFIAPKPDFLNAIRRITKENGALLIF 285 (476)
Q Consensus 229 ~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~--------G~i~~~~~~l~~l~~l~~~~g~llI~ 285 (476)
...+++.+.+.+++. +...|++++++... |...--.+++..|.++++++|+.+++
T Consensus 141 ~e~~l~~i~~~i~~~--~~~lVVIDSIq~l~~~~~~~~~g~~~qvr~~~~~L~~~ak~~~itvil 203 (446)
T PRK11823 141 AETNLEAILATIEEE--KPDLVVIDSIQTMYSPELESAPGSVSQVRECAAELMRLAKQRGIAVFL 203 (446)
T ss_pred CCCCHHHHHHHHHhh--CCCEEEEechhhhccccccCCCCCHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 334688888877654 56789999987431 11111124456789999999986553
No 459
>cd04918 ACT_AK1-AT_2 ACT domains located C-terminal to the catalytic domain of a monofunctional, lysine-sensitive, plant aspartate kinase 1 (AK1). This CD includes the second of two ACT domains located C-terminal to the catalytic domain of a monofunctional, lysine-sensitive, plant aspartate kinase 1 (AK1), which can be synergistically inhibited by S-adenosylmethionine (SAM). This isoenzyme is found in higher plants, Arabidopsis thaliana (AT) and Zea mays, and also in Chlorophyta. In its inactive state, Arabidopsis AK1 binds the effectors lysine and SAM (two molecules each) at the interface of two ACT1 domain subunits. The second ACT domain (ACT2), this CD, does not interact with an effector. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=24.84 E-value=1.8e+02 Score=20.30 Aligned_cols=46 Identities=15% Similarity=0.131 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHCCeEec--cCCCcceEEeCCCcHHHHHHHHHHHHHHH
Q 011856 426 KFARFYRGMLEEGVYFA--PSQFEAGFTSLAHSSDDIQHTITAAEKVK 471 (476)
Q Consensus 426 ~~~~~~~~l~~~Gv~~~--~~~~~~~~~~~~~t~e~i~~~~~~l~~~~ 471 (476)
...++...|.+.||-+. ..+.....+++...+++.+.++..|.+.+
T Consensus 16 ~~~~i~~aL~~~~I~v~~i~~g~s~~sis~~v~~~~~~~av~~Lh~~f 63 (65)
T cd04918 16 ILERAFHVLYTKGVNVQMISQGASKVNISLIVNDSEAEGCVQALHKSF 63 (65)
T ss_pred HHHHHHHHHHHCCCCEEEEEecCccceEEEEEeHHHHHHHHHHHHHHH
Confidence 34677888888887652 22233467778889999999999988765
No 460
>PRK10076 pyruvate formate lyase II activase; Provisional
Probab=24.76 E-value=42 Score=30.40 Aligned_cols=145 Identities=16% Similarity=0.131 Sum_probs=0.0
Q ss_pred hhhhhhcCCCCcEEEEEecHHHHHhhcCCCCccc----cCCCCCcHHHHHH--HHHHHHHhcCCCHHHHHHHHHHHHHHH
Q 011856 310 TTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQ----AGTLSGNPLAMTA--GIHTLKRLKEPGTYEYLNKITGELTQG 383 (476)
Q Consensus 310 ~t~sK~lg~G~~iG~~~~~~~i~~~l~~~~~~~~----~~t~~~~~~~~aa--a~aal~~~~~~~~~~~~~~~~~~l~~~ 383 (476)
.|.++++.- .|-.+..+++++.+.+...++. +-|++++-+.+.. ..+.++.+++..+.-.+..++-.-.+.
T Consensus 6 ~C~~~a~~~---~g~~~t~eel~~~~~~~~~f~~~sggGVt~SGGEPllq~~fl~~l~~~~k~~gi~~~leTnG~~~~~~ 82 (213)
T PRK10076 6 ECPSGAFER---IGRDITLDALEREVMKDDIFFRTSGGGVTLSGGEVLMQAEFATRFLQRLRLWGVSCAIETAGDAPASK 82 (213)
T ss_pred hchhhHHHh---cCcccCHHHHHHHHHhhhHhhcCCCCEEEEeCchHHcCHHHHHHHHHHHHHcCCCEEEECCCCCCHHH
Q ss_pred HHHHhhhcCCceEeeeeceeEEEEEecCCCcCchhhcccchHHHHHHHHHHHHCCeEeccCCCcceEEeCCCcHHHHHHH
Q 011856 384 IIDAGKKAGHAICGGYISGMFGFFFTEGPVYNFEDAKKSETTKFARFYRGMLEEGVYFAPSQFEAGFTSLAHSSDDIQHT 463 (476)
Q Consensus 384 L~~~~~~~~~~~~v~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~~~~~t~e~i~~~ 463 (476)
+.++..-.. .+.++++..+...+......+.+...+..+.+.+.|+.+.-.. .+...+..++++++.+
T Consensus 83 ~~~l~~~~D----------~~l~DiK~~d~~~~~~~tG~~~~~il~nl~~l~~~g~~v~iR~--~vIPg~nd~~e~i~~i 150 (213)
T PRK10076 83 LLPLAKLCD----------EVLFDLKIMDATQARDVVKMNLPRVLENLRLLVSEGVNVIPRL--PLIPGFTLSRENMQQA 150 (213)
T ss_pred HHHHHHhcC----------EEEEeeccCCHHHHHHHHCCCHHHHHHHHHHHHhCCCcEEEEE--EEECCCCCCHHHHHHH
Q ss_pred HHHHHH
Q 011856 464 ITAAEK 469 (476)
Q Consensus 464 ~~~l~~ 469 (476)
.+-+++
T Consensus 151 a~~l~~ 156 (213)
T PRK10076 151 LDVLIP 156 (213)
T ss_pred HHHHHH
No 461
>cd03325 D-galactonate_dehydratase D-galactonate dehydratase catalyses the dehydration of galactonate to 2-keto-3-deoxygalactnate (KDGal), as part of the D-galactonate nonphosphorolytic catabolic Entner-Doudoroff pathway. D-galactonate dehydratase belongs to the enolase superfamily of enzymes, characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion.
Probab=24.39 E-value=6.2e+02 Score=24.78 Aligned_cols=119 Identities=15% Similarity=0.116 Sum_probs=62.1
Q ss_pred HHHHHHHHhhCCCCCeEEE-eCCHHHHHHHHHHHHHhccCCceEEEEeCCCC-CCchhHHhhcCCCCccCCCCCCCCCCC
Q 011856 142 NVLAEMVISAVPSIEMVRF-VNSGTEACMGVLRLARAFTGRERIIKFEGCYH-GHADPFLVKAGSGVATLGLPDSPGVPK 219 (476)
Q Consensus 142 ~~la~~l~~~~~~~e~v~~-~~sGseA~~~al~~ar~~~~~~~ii~~~~~yh-g~~~~~~~~~g~~~~~~~~~~~~~~~~ 219 (476)
.+..+.+.+.+++.-.+.+ .|.+. ....|++.++.+.. -.+..++...+ ........+..... .|...+
T Consensus 163 ~~~i~avr~~~g~~~~l~vDaN~~~-~~~~A~~~~~~l~~-~~i~~iEeP~~~~d~~~~~~L~~~~~----~pia~d--- 233 (352)
T cd03325 163 VERVAALREAVGPDIDIGVDFHGRV-SKPMAKDLAKELEP-YRLLFIEEPVLPENVEALAEIAARTT----IPIATG--- 233 (352)
T ss_pred HHHHHHHHHhhCCCCEEEEECCCCC-CHHHHHHHHHhccc-cCCcEEECCCCccCHHHHHHHHHhCC----CCEEec---
Confidence 4555566666633224555 45444 46678887777644 34555555544 33333222221100 111100
Q ss_pred CCCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 011856 220 GATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 285 (476)
Q Consensus 220 ~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~ 285 (476)
+. ..+++++.++++.. ....+-+.+ ...|.+.. ..++.++|+++|+.++.
T Consensus 234 ----Es----~~~~~~~~~~~~~~--~~d~v~~d~--~~~GGit~----~~~~~~lA~~~gi~~~~ 283 (352)
T cd03325 234 ----ER----LFSRWDFKELLEDG--AVDIIQPDI--SHAGGITE----LKKIAAMAEAYDVALAP 283 (352)
T ss_pred ----cc----ccCHHHHHHHHHhC--CCCEEecCc--cccCCHHH----HHHHHHHHHHcCCcEec
Confidence 00 01577888887642 333444443 33344555 78899999999998763
No 462
>PRK00910 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=24.29 E-value=1.2e+02 Score=27.51 Aligned_cols=34 Identities=18% Similarity=0.153 Sum_probs=27.9
Q ss_pred CeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEE
Q 011856 246 EIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLI 284 (476)
Q Consensus 246 ~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI 284 (476)
..+++|||=++. .|.+.. ++++.+++++||+.+|
T Consensus 168 ~p~~vicEil~~-dG~ma~----~~~l~~fA~~h~l~~i 201 (218)
T PRK00910 168 QPAGVLCELTNP-DGTMAK----TPEIIAFGKLHNMPVL 201 (218)
T ss_pred CceEEEEEEecC-CCCcCC----HHHHHHHHHHcCCcEE
Confidence 357888887654 577777 8889999999999987
No 463
>KOG2792 consensus Putative cytochrome C oxidase assembly protein [Energy production and conversion]
Probab=24.23 E-value=2e+02 Score=26.83 Aligned_cols=82 Identities=23% Similarity=0.303 Sum_probs=49.0
Q ss_pred EEEEcCCCEEE--ecccChhhccCCCCc-----HHHHHHHHHHHHhcC-CCCC----------C-CHHHHHHHHHHHhhC
Q 011856 92 HMWDIDGNEYI--DYVGSWGPAIIGHAD-----DQVLAALGETMKKGT-SFGA----------P-CLLENVLAEMVISAV 152 (476)
Q Consensus 92 ~~~d~dG~~~i--D~~~~~~~~~lG~~~-----p~v~~a~~~~l~~~~-~~~~----------~-~~~~~~la~~l~~~~ 152 (476)
.+.|.+|+... ||.+.|.-.|+|+.| |+=++.|...++... ..+. | -+.-..+++.+.++.
T Consensus 123 ~L~d~~Gk~~te~df~Gkw~LiYFGFThCPDICPdELeKm~~~Vd~i~~~~~~~~~PlFIsvDPeRD~~~~~~eY~~eF~ 202 (280)
T KOG2792|consen 123 SLVDHDGKRVTEKDFLGKWSLIYFGFTHCPDICPDELEKMSAVVDEIEAKPGLPPVPLFISVDPERDSVEVVAEYVSEFH 202 (280)
T ss_pred EEEecCCCeecccccccceEEEEecccCCCCcChHHHHHHHHHHHHHhccCCCCccceEEEeCcccCCHHHHHHHHHhcC
Confidence 35677777765 788889889999833 444555555555311 1111 1 124567888888776
Q ss_pred CCCCeEEEeCCHHHHHHHHHHHHH
Q 011856 153 PSIEMVRFVNSGTEACMGVLRLAR 176 (476)
Q Consensus 153 ~~~e~v~~~~sGseA~~~al~~ar 176 (476)
| +++=..|.+|.+..+.+.-|
T Consensus 203 p---kllGLTGT~eqvk~vak~yR 223 (280)
T KOG2792|consen 203 P---KLLGLTGTTEQVKQVAKKYR 223 (280)
T ss_pred h---hhhcccCCHHHHHHHHHHhE
Confidence 5 33333456777777777443
No 464
>COG3155 ElbB Uncharacterized protein involved in an early stage of isoprenoid biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=24.14 E-value=85 Score=26.74 Aligned_cols=34 Identities=24% Similarity=0.400 Sum_probs=28.9
Q ss_pred cCCCCchhhhhhhcC-CCCcEEEEEecHHHHHhhc
Q 011856 303 FGVTPDLTTLGKIIG-GGLPVGAYGGRRDIMEMVA 336 (476)
Q Consensus 303 ~g~~pDi~t~sK~lg-~G~~iG~~~~~~~i~~~l~ 336 (476)
..+.||+..+.|+|. +|-|+|+++..+.++-.+.
T Consensus 111 C~v~pDv~al~~a~~~agKP~G~iCIaP~m~pki~ 145 (217)
T COG3155 111 CSVDPDLKALAQAMHQAGKPLGFMCIAPAMLPKIF 145 (217)
T ss_pred ceeCHHHHHHHHHHHHhCCCceEEEecHHHHHHHc
Confidence 457899999999999 8999999988888776654
No 465
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=24.08 E-value=6.6e+02 Score=24.25 Aligned_cols=96 Identities=15% Similarity=0.275 Sum_probs=53.8
Q ss_pred cCCceEEEEeC-CCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCCHHHHHHHHhcCC-CCeEEEEEcccC
Q 011856 179 TGRERIIKFEG-CYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFNDVSALENLFENNK-GEIAAIILEPVV 256 (476)
Q Consensus 179 ~~~~~ii~~~~-~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~-~~~a~vi~ep~~ 256 (476)
.+..+|+..+. .|-|.........+.+ .-..+...-.|.+.+.++++++. +-+.=+-.|+..
T Consensus 24 ~~d~~v~~~DkLTYAgn~~~l~~~~~~~----------------~~~fv~~DI~D~~~v~~~~~~~~~D~VvhfAAESHV 87 (340)
T COG1088 24 HPDDHVVNLDKLTYAGNLENLADVEDSP----------------RYRFVQGDICDRELVDRLFKEYQPDAVVHFAAESHV 87 (340)
T ss_pred CCCceEEEEecccccCCHHHHHhhhcCC----------------CceEEeccccCHHHHHHHHHhcCCCeEEEechhccc
Confidence 34466888877 6777554433222211 11234444558899999998742 222222334432
Q ss_pred CCCCcccCCHHHHH-------HHHHHHHHhCC---E--EEEeccccCc
Q 011856 257 GNSGFIAPKPDFLN-------AIRRITKENGA---L--LIFDEVMTGF 292 (476)
Q Consensus 257 ~~~G~i~~~~~~l~-------~l~~l~~~~g~---l--lI~DEv~~g~ 292 (476)
.-.+..|..|++ .|.+.+++|.. + +=.||||..+
T Consensus 88 --DRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l 133 (340)
T COG1088 88 --DRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDL 133 (340)
T ss_pred --cccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccc
Confidence 333555565554 57788888873 2 2279999766
No 466
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=23.88 E-value=1.3e+02 Score=30.07 Aligned_cols=41 Identities=17% Similarity=0.372 Sum_probs=28.8
Q ss_pred CeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc
Q 011856 246 EIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF 292 (476)
Q Consensus 246 ~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~ 292 (476)
+..++|+. -++- |.+.+ .+.+.++|+++|+++++|-==..|
T Consensus 143 ~~~~vVLS-DY~K-G~L~~----~q~~I~~ar~~~~pVLvDPKg~Df 183 (467)
T COG2870 143 SFDALVLS-DYAK-GVLTN----VQKMIDLAREAGIPVLVDPKGKDF 183 (467)
T ss_pred cCCEEEEe-cccc-ccchh----HHHHHHHHHHcCCcEEECCCCcch
Confidence 44455554 3343 45555 899999999999999999655555
No 467
>PRK06371 translation initiation factor IF-2B subunit alpha; Provisional
Probab=23.88 E-value=5.2e+02 Score=25.21 Aligned_cols=37 Identities=19% Similarity=0.271 Sum_probs=24.8
Q ss_pred eEEEEE--cccCCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 011856 247 IAAIIL--EPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 285 (476)
Q Consensus 247 ~a~vi~--ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~ 285 (476)
+-.|++ +.+..||+.+.. -+ --.|.-+|++||+++++
T Consensus 216 Vd~VivGAd~I~aNG~v~NK-iG-T~~lAl~Ak~~~VPfyV 254 (329)
T PRK06371 216 IDLVIVGADRIASNGDFANK-IG-TYEKAVLAKVNGIPFYV 254 (329)
T ss_pred CCEEEECccEEecCCCEeeh-hh-HHHHHHHHHHcCCCEEE
Confidence 444444 777777766543 33 44577789999998875
No 468
>cd04922 ACT_AKi-HSDH-ThrA_2 ACT domains of the bifunctional enzyme aspartokinase (AK) - homoserine dehydrogenase (HSDH). This CD includes the second of two ACT domains of the bifunctional enzyme aspartokinase (AK) - homoserine dehydrogenase (HSDH). The ACT domains are positioned between the N-terminal catalytic domain of AK and the C-terminal HSDH domain found in bacteria (Escherichia coli (EC) ThrA) and higher plants (Zea mays AK-HSDH). AK and HSDH are the first and third enzymes in the biosynthetic pathway of the aspartate family of amino acids. AK catalyzes the phosphorylation of Asp to P-aspartyl phosphate. HSDH catalyzes the NADPH-dependent conversion of Asp 3-semialdehyde to homoserine. HSDH is the first committed reaction in the branch of the pathway that leads to Thr and Met. In E. coli, ThrA is subject to allosteric regulation by the end product L-threonine and the native enzyme is reported to be tetrameric. As with bacteria, plant AK and HSDH are feedback inhibited by pathwa
Probab=23.43 E-value=2e+02 Score=19.61 Aligned_cols=46 Identities=15% Similarity=0.127 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHCCeEeccC--CCcceEEeCCCcHHHHHHHHHHHHHHH
Q 011856 426 KFARFYRGMLEEGVYFAPS--QFEAGFTSLAHSSDDIQHTITAAEKVK 471 (476)
Q Consensus 426 ~~~~~~~~l~~~Gv~~~~~--~~~~~~~~~~~t~e~i~~~~~~l~~~~ 471 (476)
...++.+.|.+.||-+.-. +.....+++...+++.++++++|.+.+
T Consensus 17 ~~~~i~~~l~~~~I~v~~i~~~~s~~~is~~v~~~~~~~~~~~lh~~~ 64 (66)
T cd04922 17 VAATFFSALAKANVNIRAIAQGSSERNISAVIDEDDATKALRAVHERF 64 (66)
T ss_pred HHHHHHHHHHHCCCCEEEEEecCcccEEEEEEeHHHHHHHHHHHHHHH
Confidence 3467888888998755211 113367788888899999998887765
No 469
>cd07581 nitrilase_3 Uncharacterized subgroup of the nitrilase superfamily (putative class 13 nitrilases). The nitrilase superfamily is comprised of nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes, which depend on a Glu-Lys-Cys catalytic triad. This superfamily has been classified in the literature based on global and structure based sequence analysis into thirteen different enzyme classes (referred to as 1-13). Class 13 represents proteins that at the time were difficult to place in a distinct similarity group; this subgroup represents either a new class or one that was included previously in class 13. Members of this superfamily generally form homomeric complexes, the basic building block of which is a homodimer.
Probab=23.26 E-value=93 Score=28.69 Aligned_cols=19 Identities=26% Similarity=0.564 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHHhCCEEEE
Q 011856 267 DFLNAIRRITKENGALLIF 285 (476)
Q Consensus 267 ~~l~~l~~l~~~~g~llI~ 285 (476)
.+++.++++|+++++.+++
T Consensus 61 ~~~~~l~~~a~~~~i~iv~ 79 (255)
T cd07581 61 PFVSALARLARELGITVVA 79 (255)
T ss_pred HHHHHHHHHHHHcCeEEEE
Confidence 5689999999999998884
No 470
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=23.14 E-value=92 Score=33.16 Aligned_cols=26 Identities=23% Similarity=0.289 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHhCCEEEEeccccCc
Q 011856 267 DFLNAIRRITKENGALLIFDEVMTGF 292 (476)
Q Consensus 267 ~~l~~l~~l~~~~g~llI~DEv~~g~ 292 (476)
+-++++.+-|+++||-||+|=|+..|
T Consensus 214 edfk~fVD~aH~~GIgViLD~V~~HF 239 (628)
T COG0296 214 EDFKALVDAAHQAGIGVILDWVPNHF 239 (628)
T ss_pred HHHHHHHHHHHHcCCEEEEEecCCcC
Confidence 44999999999999999999999888
No 471
>PF13401 AAA_22: AAA domain; PDB: 2QBY_B 1FNN_B 1W5T_A 1W5S_B.
Probab=23.08 E-value=85 Score=25.19 Aligned_cols=27 Identities=15% Similarity=0.214 Sum_probs=21.3
Q ss_pred CCHHHHHHHHHHHHHhCC-EEEEecccc
Q 011856 264 PKPDFLNAIRRITKENGA-LLIFDEVMT 290 (476)
Q Consensus 264 ~~~~~l~~l~~l~~~~g~-llI~DEv~~ 290 (476)
...+.++.+.+..++++. +||+||++.
T Consensus 71 ~~~~l~~~~~~~l~~~~~~~lviDe~~~ 98 (131)
T PF13401_consen 71 TSDELRSLLIDALDRRRVVLLVIDEADH 98 (131)
T ss_dssp -HHHHHHHHHHHHHHCTEEEEEEETTHH
T ss_pred CHHHHHHHHHHHHHhcCCeEEEEeChHh
Confidence 345557888888888887 999999995
No 472
>cd00308 enolase_like Enolase-superfamily, characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion. Enolase superfamily contains different enzymes, like enolases, glutarate-, fucanate- and galactonate dehydratases, o-succinylbenzoate synthase, N-acylamino acid racemase, L-alanine-DL-glutamate epimerase, mandelate racemase, muconate lactonizing enzyme and 3-methylaspartase.
Probab=23.06 E-value=5.6e+02 Score=23.10 Aligned_cols=46 Identities=11% Similarity=0.156 Sum_probs=31.0
Q ss_pred CHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 011856 232 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 285 (476)
Q Consensus 232 d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~ 285 (476)
+.+++.+.++.. ....+.+.+... |.+.. ..++.++|+++|+.++.
T Consensus 156 ~~~~~~~~~~~~--~~d~~~~k~~~~--GGi~~----~~~i~~~a~~~gi~~~~ 201 (229)
T cd00308 156 TVDDALEALELG--AVDILQIKPTRV--GGLTE----SRRAADLAEAFGIRVMV 201 (229)
T ss_pred CHHHHHHHHHcC--CCCEEecCcccc--CCHHH----HHHHHHHHHHcCCEEee
Confidence 567776677642 355566666542 33544 78899999999997765
No 473
>cd00983 recA RecA is a bacterial enzyme which has roles in homologous recombination, DNA repair, and the induction of the SOS response. RecA couples ATP hydrolysis to DNA strand exchange.
Probab=22.87 E-value=5e+02 Score=25.24 Aligned_cols=44 Identities=11% Similarity=0.222 Sum_probs=26.2
Q ss_pred CeEEEEEcccCCCCC------cc---cC---C---HHHHHHHHHHHHHhCCEEEE-eccc
Q 011856 246 EIAAIILEPVVGNSG------FI---AP---K---PDFLNAIRRITKENGALLIF-DEVM 289 (476)
Q Consensus 246 ~~a~vi~ep~~~~~G------~i---~~---~---~~~l~~l~~l~~~~g~llI~-DEv~ 289 (476)
.+..|+++++..--. .. .. . ..+|..|..+++++++.+|+ -+++
T Consensus 133 ~~~lIVIDSvaal~~~~E~~~~~~~~~~~~qaR~l~~~Lr~L~~~~~k~~~~vI~tNQvr 192 (325)
T cd00983 133 AVDLIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGSINKSNTTVIFINQLR 192 (325)
T ss_pred CCCEEEEcchHhhcccccccccccccchHHHHHHHHHHHHHHHHHHHhCCCEEEEEEccc
Confidence 577889888653211 00 00 0 13567788888999987664 4444
No 474
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=22.75 E-value=7.2e+02 Score=24.26 Aligned_cols=38 Identities=8% Similarity=0.149 Sum_probs=23.9
Q ss_pred CCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCC
Q 011856 155 IEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYH 192 (476)
Q Consensus 155 ~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yh 192 (476)
.|-++-.+||-++...+..+...+.-+...+.++..+.
T Consensus 60 yD~iV~lSGGkDSs~la~ll~~~~gl~~l~vt~~~~~~ 97 (343)
T TIGR03573 60 YDCIIGVSGGKDSTYQAHVLKKKLGLNPLLVTVDPGWN 97 (343)
T ss_pred CCEEEECCCCHHHHHHHHHHHHHhCCceEEEEECCCCC
Confidence 56788889998888877554444433333356665553
No 475
>PF01008 IF-2B: Initiation factor 2 subunit family; InterPro: IPR000649 Initiation factor 2 binds to Met-tRNA, GTP and the small ribosomal subunit. The eukaryotic translation initiation factor EIF-2B is a complex made up of five different subunits, alpha, beta, gamma, delta and epsilon, and catalyses the exchange of EIF-2-bound GDP for GTP. This family includes initiation factor 2B alpha, beta and delta subunits from eukaryotes; related proteins from archaebacteria and IF-2 from prokaryotes and also contains a subfamily of proteins in eukaryotes, archaeae (e.g. Pyrococcus furiosus), or eubacteria such as Bacillus subtilis and Thermotoga maritima. Many of these proteins were initially annotated as putative translation initiation factors despite the fact that there is no evidence for the requirement of an IF2 recycling factor in prokaryotic translation initiation. Recently, one of these proteins from B. subtilis has been functionally characterised as a 5-methylthioribose-1-phosphate isomerase (MTNA) []. This enzyme participates in the methionine salvage pathway catalysing the isomerisation of 5-methylthioribose-1-phosphate to 5-methylthioribulose-1-phosphate []. The methionine salvage pathway leads to the synthesis of methionine from methylthioadenosine, the end product of the spermidine and spermine anabolism in many species.; GO: 0044237 cellular metabolic process; PDB: 1VB5_A 1T5O_D 3A11_E 3VM6_C 1W2W_A 1T9K_A 3ECS_B 2YRF_A 2YVK_B 2A0U_A ....
Probab=22.70 E-value=3.2e+02 Score=25.66 Aligned_cols=121 Identities=15% Similarity=0.097 Sum_probs=61.0
Q ss_pred HHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCchhH-HhhcCCCCccCCCCCCCCCCCC
Q 011856 142 NVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHADPF-LVKAGSGVATLGLPDSPGVPKG 220 (476)
Q Consensus 142 ~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~~~-~~~~g~~~~~~~~~~~~~~~~~ 220 (476)
..+++...+++ ....+++|.|-+..+..+++.|+....+-+|++.+..-++..... -.+... |+
T Consensus 95 ~~I~~~~~~~I-~~~~~ILT~~~S~~v~~~l~~a~~~~~~~~V~v~es~P~~eG~~~a~~L~~~-----------gi--- 159 (282)
T PF01008_consen 95 EKIADHASELI-NDGDTILTHGYSSTVERFLLSAKKKGKKFRVIVLESRPYNEGRLMAKELAEA-----------GI--- 159 (282)
T ss_dssp HHHHHHHHCCC--TTEEEEEES--SHHHHHHHHHHHTTEEEEEEEE--TTTTHHHTHHHHHHHT-----------T----
T ss_pred HHHHHHHHHhc-cCCeEEEEeCCchHHHHHHHHHHHcCCeEEEEEccCCcchhhhhHHHHhhhc-----------ce---
Confidence 44555554555 456788888888888888887654444556777765433221111 111111 11
Q ss_pred CCCceeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEe
Q 011856 221 ATYETLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFD 286 (476)
Q Consensus 221 ~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~D 286 (476)
++..++ | .++-..+++ .-+...+=.+.+..+||.+... + -..+.-+|+++++++++=
T Consensus 160 ---~v~~i~--d-~~~~~~m~~-~vd~VliGad~v~~nG~v~nk~-G-t~~~a~~Ak~~~vPv~v~ 216 (282)
T PF01008_consen 160 ---PVTLIP--D-SAVGYVMPR-DVDKVLIGADAVLANGGVVNKV-G-TLQLALAAKEFNVPVYVL 216 (282)
T ss_dssp ---EEEEE---G-GGHHHHHHC-TESEEEEE-SEEETTS-EEEET-T-HHHHHHHHHHTT-EEEEE
T ss_pred ---eEEEEe--c-hHHHHHHHH-hCCeeEEeeeEEecCCCEeehh-h-HHHHHHHHHhhCCCEEEE
Confidence 122222 2 344555653 0133344447788887766543 3 455777899999987753
No 476
>PRK00014 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=22.53 E-value=1.3e+02 Score=27.46 Aligned_cols=39 Identities=18% Similarity=0.319 Sum_probs=29.7
Q ss_pred CeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEE-Eeccc
Q 011856 246 EIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLI-FDEVM 289 (476)
Q Consensus 246 ~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI-~DEv~ 289 (476)
...+++||=.+. .|.... ++++.+++++||+.+| ++|..
T Consensus 172 ~P~~vicEil~~-dG~ma~----~~~l~~fA~~~~l~iisi~dli 211 (230)
T PRK00014 172 RPAGVLCELMNA-DGTMMR----GASLERYAAKEGLVALAIDELA 211 (230)
T ss_pred CceEEEEEEeCC-CCCccC----HHHHHHHHHHcCCcEEEHHHHH
Confidence 357888887544 577777 8899999999999987 34444
No 477
>PRK05234 mgsA methylglyoxal synthase; Validated
Probab=22.51 E-value=2.3e+02 Score=23.78 Aligned_cols=47 Identities=15% Similarity=0.203 Sum_probs=30.6
Q ss_pred HHHHHHHhcCCCCeEEEEEcccC-CCCCcccCCHHHHHHHHHHHHHhCCEEEEe
Q 011856 234 SALENLFENNKGEIAAIILEPVV-GNSGFIAPKPDFLNAIRRITKENGALLIFD 286 (476)
Q Consensus 234 ~~le~~l~~~~~~~a~vi~ep~~-~~~G~i~~~~~~l~~l~~l~~~~g~llI~D 286 (476)
..+.+.+.+. ++.+||.-|-. +..+. ..+ -..|++.|-+|+++++..
T Consensus 65 ~~i~~~I~~g--~i~lVInt~dp~~~~~~---~~D-~~~IRR~Av~~~IP~~T~ 112 (142)
T PRK05234 65 QQIGALIAEG--KIDMLIFFRDPLTAQPH---DPD-VKALLRLADVWNIPVATN 112 (142)
T ss_pred hhHHHHHHcC--ceeEEEEecCCCCCCcc---cch-HHHHHHHHHHcCCCEEcC
Confidence 3455666653 78888876521 32221 222 568999999999999865
No 478
>TIGR00524 eIF-2B_rel eIF-2B alpha/beta/delta-related uncharacterized proteins. This model, eIF-2B_rel, describes half of a superfamily, where the other half consists of eukaryotic translation initiation factor 2B (eIF-2B) subunits alpha, beta, and delta. It is unclear whether the eIF-2B_rel set is monophyletic, or whether they are all more closely related to each other than to any eIF-2B subunit because the eIF-2B clade is highly derived. Members of this branch of the family are all uncharacterized with respect to function and are found in the Archaea, Bacteria, and Eukarya, although a number are described as putative translation intiation factor components. Proteins found by eIF-2B_rel include at least three clades, including a set of uncharacterized eukaryotic proteins, a set found in some but not all Archaea, and a set universal so far among the Archaea and closely related to several uncharacterized bacterial proteins.
Probab=22.10 E-value=7.1e+02 Score=23.91 Aligned_cols=51 Identities=14% Similarity=0.172 Sum_probs=30.6
Q ss_pred HHHHHHhcCCCCeEEEE--EcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEe-ccc
Q 011856 235 ALENLFENNKGEIAAII--LEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFD-EVM 289 (476)
Q Consensus 235 ~le~~l~~~~~~~a~vi--~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~D-Ev~ 289 (476)
++-..++.. ++-.|+ .+.+..|||.+.. -+ --.+.-+|+.|++++++= |.|
T Consensus 188 a~~~~m~~~--~vd~VlvGAd~v~~nG~v~nk-~G-T~~lA~~Ak~~~vPv~V~a~s~ 241 (303)
T TIGR00524 188 MAAYFMQKG--EIDAVIVGADRIARNGDVANK-IG-TYQLAVLAKEFRIPFFVAAPLS 241 (303)
T ss_pred HHHHHcccc--CCCEEEEcccEEecCCCEeEh-hh-HHHHHHHHHHhCCCEEEecccc
Confidence 344455422 343444 4778888776654 33 445777889999987753 444
No 479
>PRK00881 purH bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Provisional
Probab=22.09 E-value=8.8e+02 Score=25.27 Aligned_cols=40 Identities=25% Similarity=0.341 Sum_probs=28.3
Q ss_pred HHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 011856 233 VSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 285 (476)
Q Consensus 233 ~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~ 285 (476)
.+.++.+.+. .+.+|+.+ +|.+- -+++.+.|++||+.+++
T Consensus 466 ~Dtie~aa~~---Gv~aIiqP-----gGSir-----D~evI~aAne~gIamvf 505 (513)
T PRK00881 466 RDGVEAAAKA---GITAIIQP-----GGSIR-----DEEVIAAADEHGIAMVF 505 (513)
T ss_pred hhHHHHHHHc---CCeEEEeC-----CCCCC-----hHHHHHHHHHcCCEEEE
Confidence 5677777664 46666665 34443 36799999999998875
No 480
>COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]
Probab=22.01 E-value=2.2e+02 Score=27.17 Aligned_cols=52 Identities=23% Similarity=0.298 Sum_probs=37.9
Q ss_pred HHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCc
Q 011856 233 VSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGF 292 (476)
Q Consensus 233 ~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~ 292 (476)
.+++|+.+.+. ....+.+.|.... ..+.+..+..+.+.|.++|+++++ |+|.
T Consensus 115 ~~E~er~v~~~--gf~g~~l~p~~~~---~~~~~~~~~pi~~~a~~~gvpv~i---htG~ 166 (293)
T COG2159 115 AEELERRVREL--GFVGVKLHPVAQG---FYPDDPRLYPIYEAAEELGVPVVI---HTGA 166 (293)
T ss_pred HHHHHHHHHhc--CceEEEecccccC---CCCCChHHHHHHHHHHHcCCCEEE---EeCC
Confidence 45677777654 6788888886543 234444489999999999999998 7664
No 481
>PF05213 Corona_NS2A: Coronavirus NS2A protein; InterPro: IPR007878 This entry is represented by Coronavirus non-structural protein 2A (32kDa); it is a family of uncharacterised viral proteins. Members have a phosphoesterase module (2H) [] and are predicted to be involved in RNA modification. The viral group of 2H phosphoesterases contains proteins from two unrelated virus types: the type C rotaviruses (VP3 protein, IPR011181 from INTERPRO) that are double stranded multipartite RNA viruses and the coronaviruses (NS2 protein, this group) that are positive strand RNA viruses. Given that these viruses have vertebrate hosts, it is likely that the 2H phosphoesterase domain was derived from the host by one of virus groups followed by rapid sequence divergence []. Subsequently, it may have been exchanged between the viral families. Although the direction of the exchange is not clear, it is possible that a double stranded replicative form of a subgenomic RNA transcript of the coronavirus NS2 was stabilised by a rotavirus and incorporated into its multiple double stranded RNA genome []. These proteins can be utilised as novel drug targets because of their predicted RNA modification role.
Probab=21.79 E-value=2.2e+02 Score=25.58 Aligned_cols=48 Identities=29% Similarity=0.210 Sum_probs=37.3
Q ss_pred HHHHHHHHHHCCeEeccCCCcceEE-eCCCcHHHHHHHHHHHHHHHHHh
Q 011856 427 FARFYRGMLEEGVYFAPSQFEAGFT-SLAHSSDDIQHTITAAEKVKMRF 474 (476)
Q Consensus 427 ~~~~~~~l~~~Gv~~~~~~~~~~~~-~~~~t~e~i~~~~~~l~~~~~~~ 474 (476)
...+...+++.|+-+.---.|++.+ .+-++++++......|.++++++
T Consensus 24 ~~~LQ~~~~~eG~d~k~QkaPHlSl~mL~Isd~~i~~V~~~iq~ViddM 72 (248)
T PF05213_consen 24 FKDLQFQLLEEGVDCKLQKAPHLSLGMLDISDEDIPDVETAIQKVIDDM 72 (248)
T ss_pred HHHHHHHHHHcCCCccccccCeeEEEEEEcChhhhhhHHHHHHHHHHHh
Confidence 4556678889998765444567777 58889999999998999888875
No 482
>cd01535 4RHOD_Repeat_4 Member of the Rhodanese Homology Domain superfamily, repeat 4. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. This CD aligns the 4th repeat which, in general, contains the putative catalytic Cys residue.
Probab=21.78 E-value=4.8e+02 Score=21.78 Aligned_cols=53 Identities=17% Similarity=0.053 Sum_probs=31.9
Q ss_pred HHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeCCCCCCch
Q 011856 142 NVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEGCYHGHAD 196 (476)
Q Consensus 142 ~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~~yhg~~~ 196 (476)
.+|.+.+.+.-++..-|++|.+|..|...+-.+. ..+..+|.+.++++.+|..
T Consensus 37 ~~l~~~l~~l~~~~~vVv~c~~g~~a~~aa~~L~--~~G~~~v~~L~GG~~aW~~ 89 (145)
T cd01535 37 AQLAQALEKLPAAERYVLTCGSSLLARFAAADLA--ALTVKPVFVLEGGTAAWIA 89 (145)
T ss_pred HHHHHHHHhcCCCCCEEEEeCCChHHHHHHHHHH--HcCCcCeEEecCcHHHHHH
Confidence 4455555543224456677777776666655542 2355678888888877643
No 483
>PF07085 DRTGG: DRTGG domain; InterPro: IPR010766 This presumed domain is about 120 amino acids in length. It is found associated with CBS domains IPR000644 from INTERPRO, as well as the CbiA domain IPR002586 from INTERPRO. The function of this domain is unknown. It is named the DRTGG domain after some of the most conserved residues. This domain may be very distantly related to a pair of CBS domains. There are no significant sequence similarities, but its length and association with CBS domains supports this idea. ; PDB: 3L31_B 3L2B_A 2IOJ_A.
Probab=21.48 E-value=2.5e+02 Score=21.74 Aligned_cols=48 Identities=25% Similarity=0.254 Sum_probs=29.7
Q ss_pred eeeccCCCHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 011856 225 TLTAPFNDVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 285 (476)
Q Consensus 225 ~~~~~~~d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~ 285 (476)
.+..+-+..+.+..++.. .++++|+.. ...| =+.+.++|+++++.++.
T Consensus 43 lvIt~gdR~di~~~a~~~---~i~~iIltg------~~~~----~~~v~~la~~~~i~vi~ 90 (105)
T PF07085_consen 43 LVITPGDREDIQLAAIEA---GIACIILTG------GLEP----SEEVLELAKELGIPVIS 90 (105)
T ss_dssp EEEEETT-HHHHHHHCCT---TECEEEEET------T--------HHHHHHHHHHT-EEEE
T ss_pred EEEEeCCcHHHHHHHHHh---CCCEEEEeC------CCCC----CHHHHHHHHHCCCEEEE
Confidence 455555566777777764 477777763 2344 36689999999998885
No 484
>COG0036 Rpe Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism]
Probab=21.39 E-value=6.3e+02 Score=23.01 Aligned_cols=44 Identities=23% Similarity=0.372 Sum_probs=29.1
Q ss_pred CHHHHHHHHhcCCCCeEEEEEcccCCC-CCcccCCHHHHHHHHHHHHHhC
Q 011856 232 DVSALENLFENNKGEIAAIILEPVVGN-SGFIAPKPDFLNAIRRITKENG 280 (476)
Q Consensus 232 d~~~le~~l~~~~~~~a~vi~ep~~~~-~G~i~~~~~~l~~l~~l~~~~g 280 (476)
.++.++..+. ++-.|++.++++- ||.-. -++-+++|+++-+..+
T Consensus 121 p~~~i~~~l~----~vD~VllMsVnPGfgGQ~F-i~~~l~Ki~~lr~~~~ 165 (220)
T COG0036 121 PLEALEPVLD----DVDLVLLMSVNPGFGGQKF-IPEVLEKIRELRAMID 165 (220)
T ss_pred CHHHHHHHHh----hCCEEEEEeECCCCccccc-CHHHHHHHHHHHHHhc
Confidence 4788888887 4666777776654 55544 4455888877766544
No 485
>cd07578 nitrilase_1_R1 First nitrilase domain of an uncharacterized subgroup of the nitrilase superfamily (putative class 13 nitrilases). Members of this subgroup have two nitrilase domains. This is the first of those two domains. The nitrilase superfamily is comprised of nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes, which depend on a Glu-Lys-Cys catalytic triad. This superfamily has been classified in the literature based on global and structure based sequence analysis into thirteen different enzyme classes (referred to as 1-13). Class 13 represents proteins that at the time were difficult to place in a distinct similarity group; this subgroup represents either a new class or one that was included previously in class 13. Members of this superfamily generally form homomeric complexes, the basic building block of which is a homodimer.
Probab=21.38 E-value=1.5e+02 Score=27.50 Aligned_cols=53 Identities=15% Similarity=0.254 Sum_probs=30.2
Q ss_pred HHHHHHHHhcCCCCeEEEEEcccCCCCCcccC------------CHHHHHHHHHHHHHhCCEEEE
Q 011856 233 VSALENLFENNKGEIAAIILEPVVGNSGFIAP------------KPDFLNAIRRITKENGALLIF 285 (476)
Q Consensus 233 ~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~------------~~~~l~~l~~l~~~~g~llI~ 285 (476)
++.+.+.+++....-+-+|+-|-...+|.... +..+++.|.++++++++.+++
T Consensus 19 ~~~~~~~i~~A~~~gadlivfPE~~l~gy~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~i~ii~ 83 (258)
T cd07578 19 IERLLALCEEAARAGARLIVTPEMATTGYCWYDRAEIAPFVEPIPGPTTARFAELAREHDCYIVV 83 (258)
T ss_pred HHHHHHHHHHHHhCCCCEEEcccccccCCCcCCHHHhhhhcccCCCHHHHHHHHHHHHcCcEEEE
Confidence 44444445432112234666665554454221 123588999999999998774
No 486
>COG3392 Adenine-specific DNA methylase [DNA replication, recombination, and repair]
Probab=21.15 E-value=7e+02 Score=23.50 Aligned_cols=105 Identities=19% Similarity=0.245 Sum_probs=55.9
Q ss_pred eEEEEeCCCCCCchhHHhhcCCCCccCCCCCCCCCCCCCCCceeeccCCC----HHHHHHHHhcCCCCeEEEEEcccCCC
Q 011856 183 RIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKGATYETLTAPFND----VSALENLFENNKGEIAAIILEPVVGN 258 (476)
Q Consensus 183 ~ii~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d----~~~le~~l~~~~~~~a~vi~ep~~~~ 258 (476)
+|+..|+.|..+-.+.-...-..+....-|...|...........-.++. .+++++++.. ..+-+|+-+-+++
T Consensus 205 DilYLDpPYN~rqYs~nYhLLe~IA~y~kP~~~gk~~~~d~~~~KSsfcs~~~a~~af~eLI~d---~k~kyIlLSYNne 281 (330)
T COG3392 205 DILYLDPPYNARQYSANYHLLETIARYEKPEPKGKTGLIDYSWQKSSFCSRKQATQAFEELISD---AKFKYILLSYNNE 281 (330)
T ss_pred CEEEeCCCccccccchHHHHHHHHHhcCCcccccccCCCChhhhhhhhhHHHHHHHHHHHHHhh---cCccEEEEecCcc
Confidence 89999999987654332110000001111222222111111111222332 4567788874 2334555555555
Q ss_pred CCcccCCHHHHHHHHHHHHHhCCEEEEeccccCccccc
Q 011856 259 SGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAY 296 (476)
Q Consensus 259 ~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~ 296 (476)
|.+. .+.|.++..++|..=|+.+-|.-||++.
T Consensus 282 -g~~s-----~e~i~eiL~k~G~~~ife~~Y~~Fra~k 313 (330)
T COG3392 282 -GLMS-----EEEILEILEKYGKYSIFETTYKRFRADK 313 (330)
T ss_pred -cccc-----HHHHHHHHHhcCcEEEehhHHHHHhccc
Confidence 5544 5778899999999999988886666553
No 487
>cd07579 nitrilase_1_R2 Second nitrilase domain of an uncharacterized subgroup of the nitrilase superfamily (putative class 13 nitrilases). Members of this subgroup have two nitrilase domains. This is the second of those two domains. The nitrilase superfamily is comprised of nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes, which depend on a Glu-Lys-Cys catalytic triad. This superfamily has been classified in the literature based on global and structure based sequence analysis into thirteen different enzyme classes (referred to as 1-13). Class 13 represents proteins that at the time were difficult to place in a distinct similarity group; this subgroup represents either a new class or one that was included previously in class 13. Members of this superfamily generally form homomeric complexes, the basic building block of which is a homodimer.
Probab=20.93 E-value=1.1e+02 Score=28.89 Aligned_cols=54 Identities=17% Similarity=0.300 Sum_probs=31.1
Q ss_pred CHHHHHHHHhcCCCCeEEEEEcccCCCCCccc-------CCHHHHHHHHHHHHHhCCEEEE
Q 011856 232 DVSALENLFENNKGEIAAIILEPVVGNSGFIA-------PKPDFLNAIRRITKENGALLIF 285 (476)
Q Consensus 232 d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~-------~~~~~l~~l~~l~~~~g~llI~ 285 (476)
+++.+++++++...+-+-+|+-|-...+|... ....+++.|.++++++++.+|+
T Consensus 16 Nl~~~~~~i~~A~~~gadlvvfPE~~ltG~~~~~~~~~~~~~~~~~~l~~lA~~~~i~iv~ 76 (279)
T cd07579 16 NLATIDRLAAEAKATGAELVVFPELALTGLDDPASEAESDTGPAVSALRRLARRLRLYLVA 76 (279)
T ss_pred HHHHHHHHHHHHHHCCCCEEEeCCccccCCCChHHhcccCCCHHHHHHHHHHHHcCeEEEE
Confidence 35555666653211223355555444444321 1235689999999999998774
No 488
>cd01018 ZntC Metal binding protein ZntC. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and bind their specific ligands in the cleft between these domains. In addition, many of these proteins possess a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=20.83 E-value=6e+02 Score=23.65 Aligned_cols=40 Identities=20% Similarity=0.429 Sum_probs=23.8
Q ss_pred CHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEE
Q 011856 232 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLI 284 (476)
Q Consensus 232 d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI 284 (476)
++..+.+.++++ .+.+|++|+..+. +.+..++++.|+-++
T Consensus 205 ~l~~l~~~ik~~--~v~~if~e~~~~~-----------~~~~~la~~~g~~v~ 244 (266)
T cd01018 205 DLKRLIDLAKEK--GVRVVFVQPQFST-----------KSAEAIAREIGAKVV 244 (266)
T ss_pred HHHHHHHHHHHc--CCCEEEEcCCCCc-----------HHHHHHHHHcCCeEE
Confidence 455555566544 6777888875432 234466777777654
No 489
>COG1625 Fe-S oxidoreductase, related to NifB/MoaA family [Energy production and conversion]
Probab=20.72 E-value=3.1e+02 Score=27.43 Aligned_cols=55 Identities=27% Similarity=0.463 Sum_probs=34.3
Q ss_pred eeecc-CCCHHHHHHHHhc----CCCCeEEEEEccc----CCCCCcccCCHHHHHHHHHHHHHh
Q 011856 225 TLTAP-FNDVSALENLFEN----NKGEIAAIILEPV----VGNSGFIAPKPDFLNAIRRITKEN 279 (476)
Q Consensus 225 ~~~~~-~~d~~~le~~l~~----~~~~~a~vi~ep~----~~~~G~i~~~~~~l~~l~~l~~~~ 279 (476)
++.+| +||.+.|++.++. +...+.++.++|+ ++..+.-.+.++.++.+.+++++.
T Consensus 181 iVl~PGvNdge~L~kT~~dL~~~g~~~~~~~~~~pvGlt~~n~~~i~~~t~~~l~~~k~i~re~ 244 (414)
T COG1625 181 IVLCPGVNDGEELEKTLEDLEEWGAHEVILMRVVPVGLTRYNRPGIRPPTPHELEEFKEIVREF 244 (414)
T ss_pred EEEcCCcCcHHHHHHHHHHHHHhCcCceeEEEeecceeeecCCCCCCCCCHHHHHHHHHHHHHH
Confidence 44444 6788888887753 2333444435664 233466677777788888888763
No 490
>PF05913 DUF871: Bacterial protein of unknown function (DUF871); InterPro: IPR008589 This family consists of several conserved hypothetical proteins from bacteria and archaea. The function of this family is unknown though a number are annotated as outer surface proteins.; PDB: 2P0O_A 1X7F_A.
Probab=20.63 E-value=1.6e+02 Score=29.01 Aligned_cols=92 Identities=17% Similarity=0.126 Sum_probs=41.8
Q ss_pred HHHHHHHHhcC-CCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCccccccchhhccCCCCchhh
Q 011856 233 VSALENLFENN-KGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIFDEVMTGFRLAYGGAQEYFGVTPDLTT 311 (476)
Q Consensus 233 ~~~le~~l~~~-~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~DEv~~g~r~g~~~~~~~~g~~pDi~t 311 (476)
.+..++.|+.. .-...-|++.-..++ .....-.+.+++|.++|+++|.-+++|=.-. ..+++|..++-+.
T Consensus 13 ~~~~~~yi~~a~~~Gf~~iFTSL~ipe-~~~~~~~~~~~~l~~~a~~~~~~v~~Disp~--------~l~~lg~~~~dl~ 83 (357)
T PF05913_consen 13 FEENKAYIEKAAKYGFKRIFTSLHIPE-DDPEDYLERLKELLKLAKELGMEVIADISPK--------VLKKLGISYDDLS 83 (357)
T ss_dssp HHHHHHHHHHHHCTTEEEEEEEE----------HHHHHHHHHHHHHHCT-EEEEEE-CC--------HHHTTT-BTTBTH
T ss_pred HHHHHHHHHHHHHCCCCEEECCCCcCC-CCHHHHHHHHHHHHHHHHHCCCEEEEECCHH--------HHHHcCCCHHHHH
Confidence 56666666431 113444444322222 1112223448888999999999999994433 2334444442222
Q ss_pred hhhhcC-CCCcEEEEEecHHHHH
Q 011856 312 LGKIIG-GGLPVGAYGGRRDIME 333 (476)
Q Consensus 312 ~sK~lg-~G~~iG~~~~~~~i~~ 333 (476)
.=|-+| .|+|+=+-...+++.+
T Consensus 84 ~~~~lGi~~lRlD~Gf~~~~ia~ 106 (357)
T PF05913_consen 84 FFKELGIDGLRLDYGFSGEEIAK 106 (357)
T ss_dssp HHHHHT-SEEEESSS-SCHHHHH
T ss_pred HHHHcCCCEEEECCCCCHHHHHH
Confidence 223355 3555544444444433
No 491
>cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=20.51 E-value=2.2e+02 Score=24.35 Aligned_cols=40 Identities=18% Similarity=0.359 Sum_probs=23.3
Q ss_pred CCeEEEEEcccCCCCCcc---------cCCHHHHHHHHHHHHHhCCEEE
Q 011856 245 GEIAAIILEPVVGNSGFI---------APKPDFLNAIRRITKENGALLI 284 (476)
Q Consensus 245 ~~~a~vi~ep~~~~~G~i---------~~~~~~l~~l~~l~~~~g~llI 284 (476)
+....|++.|........ .....|-+.++++|+++++.+|
T Consensus 103 ~~~~ii~~~p~~~~~~~~~~~~~~~~~~~~~~~n~~l~~~a~~~~~~~i 151 (191)
T cd01834 103 SAPRIVLVSPIAYEANEDPLPDGAEYNANLAAYADAVRELAAENGVAFV 151 (191)
T ss_pred CCCcEEEECCcccCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEE
Confidence 345667777654332211 1123445667888999997766
No 492
>PRK08335 translation initiation factor IF-2B subunit alpha; Validated
Probab=20.44 E-value=7.4e+02 Score=23.46 Aligned_cols=116 Identities=15% Similarity=0.094 Sum_probs=58.8
Q ss_pred HHHHHHHHhhCCCCCeEEEeCCHHHHHHHHHHHHHhccCCceEEEEeC--CCCCCchhHHhhcCCCCccCCCCCCCCCCC
Q 011856 142 NVLAEMVISAVPSIEMVRFVNSGTEACMGVLRLARAFTGRERIIKFEG--CYHGHADPFLVKAGSGVATLGLPDSPGVPK 219 (476)
Q Consensus 142 ~~la~~l~~~~~~~e~v~~~~sGseA~~~al~~ar~~~~~~~ii~~~~--~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~ 219 (476)
.++++.-.++.++ ..+++|.+-+..+...++.|....++-+|++.+. .+.|... +..+... |+
T Consensus 97 ~~I~~~a~~~I~~-g~~ILTh~~S~tv~~~l~~A~~~gk~~~V~v~EsrP~~qG~~l-a~eL~~~-----------GI-- 161 (275)
T PRK08335 97 REIGNIGSELIDD-GDVIITHSFSSAVLEILKTAKRKGKRFKVILTESAPDYEGLAL-ANELEFL-----------GI-- 161 (275)
T ss_pred HHHHHHHHHHcCC-CCEEEEECCcHHHHHHHHHHHHcCCceEEEEecCCCchhHHHH-HHHHHHC-----------CC--
Confidence 4555555555543 3466666656667777776544334456666642 3344332 2222221 22
Q ss_pred CCCCceeeccCCCHHHHHHHHhcCCCCeEEEE--EcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 011856 220 GATYETLTAPFNDVSALENLFENNKGEIAAII--LEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 285 (476)
Q Consensus 220 ~~~~~~~~~~~~d~~~le~~l~~~~~~~a~vi--~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~ 285 (476)
++..++-+. +-.++++ +-.|+ .+.+..||+.+.. -+ --.+.-+|+.||+++++
T Consensus 162 ----~vtlI~Dsa---~~~~m~~----vd~VivGAD~I~~nG~v~NK-iG-T~~lA~~Ak~~~vPfyV 216 (275)
T PRK08335 162 ----EFEVITDAQ---LGLFAKE----ATLALVGADNVTRDGYVVNK-AG-TYLLALACHDNGVPFYV 216 (275)
T ss_pred ----CEEEEeccH---HHHHHHh----CCEEEECccEEecCCCEeeh-hh-HHHHHHHHHHcCCCEEE
Confidence 122222122 2223432 33333 4677777665543 33 34467788999998775
No 493
>PRK04148 hypothetical protein; Provisional
Probab=20.41 E-value=5e+02 Score=21.54 Aligned_cols=24 Identities=29% Similarity=0.360 Sum_probs=20.5
Q ss_pred ccCCHHHHHHHHHHHHHhCCEEEE
Q 011856 262 IAPKPDFLNAIRRITKENGALLIF 285 (476)
Q Consensus 262 i~~~~~~l~~l~~l~~~~g~llI~ 285 (476)
+-|++|...-|.+++++.|+-|++
T Consensus 84 irpp~el~~~~~~la~~~~~~~~i 107 (134)
T PRK04148 84 IRPPRDLQPFILELAKKINVPLII 107 (134)
T ss_pred eCCCHHHHHHHHHHHHHcCCCEEE
Confidence 457888899999999999997775
No 494
>cd03318 MLE Muconate Lactonizing Enzyme (MLE), an homooctameric enzyme, catalyses the conversion of cis,cis-muconate (CCM) to muconolactone (ML) in the catechol branch of the beta-ketoadipate pathway. This pathway is used in soil microbes to breakdown lignin-derived aromatics, catechol and protocatechuate, to citric acid cycle intermediates. Some bacterial species are also capable of dehalogenating chloroaromatic compounds by the action of chloromuconate lactonizing enzymes (Cl-MLEs). MLEs are members of the enolase superfamily characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and that is stabilized by coordination to the essential Mg2+ ion.
Probab=20.38 E-value=8.2e+02 Score=23.98 Aligned_cols=46 Identities=13% Similarity=0.069 Sum_probs=32.0
Q ss_pred CHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 011856 232 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 285 (476)
Q Consensus 232 d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~ 285 (476)
+++++.++++.. .+..+.+.+... |.+.. ..++.++|+++|+.++.
T Consensus 250 ~~~~~~~~i~~~--~~d~~~~d~~~~--GGit~----~~~~~~~a~~~gi~~~~ 295 (365)
T cd03318 250 GPADAFELARRG--AADVFSLKIAKS--GGLRR----AQKVAAIAEAAGIALYG 295 (365)
T ss_pred CHHHHHHHHHhC--CCCeEEEeeccc--CCHHH----HHHHHHHHHHcCCceee
Confidence 678888888743 355666666543 44555 78899999999987653
No 495
>PF02603 Hpr_kinase_N: HPr Serine kinase N terminus; InterPro: IPR011126 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents the N-terminal region of Hpr Serine/threonine kinase PtsK. This kinase is the sensor in a multicomponent phosphorelay system in control of carbon catabolic repression in bacteria []. This kinase in unusual in that it recognises the tertiary structure of its target and is a member of a novel family unrelated to any previously described protein phosphorylating enzymes []. X-ray analysis of the full-length crystalline enzyme from Staphylococcus xylosus at a resolution of 1.95 A shows the enzyme to consist of two clearly separated domains that are assembled in a hexameric structure resembling a three-bladed propeller. The blades are formed by two N-terminal domains each, and the compact central hub assembles the C-terminal kinase domains []. ; GO: 0000155 two-component sensor activity, 0004672 protein kinase activity, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay), 0006109 regulation of carbohydrate metabolic process; PDB: 1KNX_B 1KO7_A.
Probab=20.38 E-value=97 Score=25.36 Aligned_cols=38 Identities=21% Similarity=0.304 Sum_probs=20.6
Q ss_pred HHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 011856 235 ALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 285 (476)
Q Consensus 235 ~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~ 285 (476)
.++++++. ++.++|+.-.+ .+ -+.+.++|+++++.|+.
T Consensus 73 ~l~~l~~~---~~P~iIvt~~~------~~----p~~l~e~a~~~~ipll~ 110 (127)
T PF02603_consen 73 RLEKLFSY---NPPCIIVTRGL------EP----PPELIELAEKYNIPLLR 110 (127)
T ss_dssp HHHHHCTT---T-S-EEEETTT-------------HHHHHHHHHCT--EEE
T ss_pred HHHHHhCC---CCCEEEEECcC------CC----CHHHHHHHHHhCCcEEE
Confidence 35555553 56666665432 34 36688999999998774
No 496
>PRK14017 galactonate dehydratase; Provisional
Probab=20.28 E-value=7e+02 Score=24.74 Aligned_cols=46 Identities=13% Similarity=0.132 Sum_probs=31.0
Q ss_pred CHHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 011856 232 DVSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 285 (476)
Q Consensus 232 d~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~ 285 (476)
++.+++++++.. ....+-+.+ +..|.+.. ..++.++|+++|+.++.
T Consensus 239 ~~~~~~~li~~~--a~d~v~~d~--~~~GGit~----~~~ia~~A~~~gi~~~~ 284 (382)
T PRK14017 239 SRWDFKRVLEAG--GVDIIQPDL--SHAGGITE----CRKIAAMAEAYDVALAP 284 (382)
T ss_pred CHHHHHHHHHcC--CCCeEecCc--cccCCHHH----HHHHHHHHHHcCCeEee
Confidence 578888888753 233444443 33344555 78899999999987664
No 497
>PF13407 Peripla_BP_4: Periplasmic binding protein domain; PDB: 3BRS_B 3GBP_A 3GA5_A 1GCG_A 1GCA_A 3H75_A 3D02_A 3L49_B 3EJW_B 3T95_A ....
Probab=20.09 E-value=2.2e+02 Score=25.88 Aligned_cols=41 Identities=22% Similarity=0.368 Sum_probs=29.4
Q ss_pred HHHHHHHHhcCCCCeEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCEEEE
Q 011856 233 VSALENLFENNKGEIAAIILEPVVGNSGFIAPKPDFLNAIRRITKENGALLIF 285 (476)
Q Consensus 233 ~~~le~~l~~~~~~~a~vi~ep~~~~~G~i~~~~~~l~~l~~l~~~~g~llI~ 285 (476)
.+.+++++.+ .+.+||+.|..+.. +..+.+-|++.|+.+|.
T Consensus 45 ~~~i~~~i~~---~~d~Iiv~~~~~~~---------~~~~l~~~~~~gIpvv~ 85 (257)
T PF13407_consen 45 IEQIEQAISQ---GVDGIIVSPVDPDS---------LAPFLEKAKAAGIPVVT 85 (257)
T ss_dssp HHHHHHHHHT---TESEEEEESSSTTT---------THHHHHHHHHTTSEEEE
T ss_pred HHHHHHHHHh---cCCEEEecCCCHHH---------HHHHHHHHhhcCceEEE
Confidence 5667777775 47789999876533 34456668889998886
Done!