BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011866
(476 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2C7B|A Chain A, The Crystal Structure Of Este1, A New Thermophilic And
Thermostable Carboxylesterase Cloned From A Metagenomic
Library
pdb|2C7B|B Chain B, The Crystal Structure Of Este1, A New Thermophilic And
Thermostable Carboxylesterase Cloned From A Metagenomic
Library
Length = 311
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 98/229 (42%), Gaps = 9/229 (3%)
Query: 190 RLDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSE-RDIIVACIDYRNFPQGT 248
R +YFPK + G P V + GG ++ G + ++LS D +V +DYR P+
Sbjct: 61 RARVYFPKKAAG-LPAVLYYHGGGFVFGSIETHDHICRRLSRLSDSVVVSVDYRLAPEYK 119
Query: 249 IKDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTT 308
V+DA + +V + E G DPDRI + G SAG ++AA +I + GE
Sbjct: 120 FPTAVEDAYAALKWVADRADELGVDPDRIAVAGDSAGGNLAAVV----SILDRNSGEKLV 175
Query: 309 WSVSQIRAYFGLSGGYNLFDLVDHFHSRGLYRSIFLSIMDGEESLRQYSPEVLVQDPNTR 368
I + G LV+ + I L + G + L++ +
Sbjct: 176 KKQVLIYPVVNXT-GVPTASLVEFGVAETTSLPIELXVWFGRQYLKRPEEAYDFKASPLL 234
Query: 369 HAVSLLPPIILFHGTADYSIPADASKNFANTLQRVGVRAESILYEGKTH 417
+ LPP ++ TA+Y D + +A + G RA ++ + G H
Sbjct: 235 ADLGGLPPALVV--TAEYDPLRDEGELYAYKXKASGSRAVAVRFAGXVH 281
>pdb|2HM7|A Chain A, Crystal Structure Analysis Of The G84s Est2 Mutant
Length = 310
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 104/245 (42%), Gaps = 40/245 (16%)
Query: 190 RLDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERD-IIVACIDYRNFPQGT 248
++ +Y P+ + P P + + GG+W++G + + L++ +V +DYR P+
Sbjct: 61 KVRMYRPEGVEPPYPALVYYHGGSWVVGDLETHDPVCRVLAKDGRAVVFSVDYRLAPEHK 120
Query: 249 IKDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETG------ 302
V+DA + ++ +++ DP RI + G SAG ++AA T + KE G
Sbjct: 121 FPAAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSI--LAKERGGPALAF 178
Query: 303 ----------EGESTTWSVSQIRAYFGLSGGYNLFDLVDHFHSRGLYRSIFLSIMDGEES 352
+ S+ + + L+GG L+ +R +L+ + EE
Sbjct: 179 QLLIYPSTGYDPAHPPASIEENAEGYLLTGGMMLW-----------FRDQYLNSL--EEL 225
Query: 353 LRQYSPEVLVQDPNTRHAVSLLPPIILFHGTADYSIPADASKNFANTLQRVGVRAESILY 412
+ VL D +S LPP + TA Y D K +A L + GV+ E +
Sbjct: 226 THPWFSPVLYPD------LSGLPPAYI--ATAQYDPLRDVGKLYAEALNKAGVKVEIENF 277
Query: 413 EGKTH 417
E H
Sbjct: 278 EDLIH 282
>pdb|1QZ3|A Chain A, Crystal Structure Of Mutant M211sR215L OF CARBOXYLESTERASE
Est2 Complexed With Hexadecanesulfonate
pdb|1U4N|A Chain A, Crystal Structure Analysis Of The M211sR215L EST2 MUTANT
Length = 310
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 102/245 (41%), Gaps = 40/245 (16%)
Query: 190 RLDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERD-IIVACIDYRNFPQGT 248
++ +Y P+ + P P + + GG W++G + + L++ +V +DYR P+
Sbjct: 61 KVRMYRPEGVEPPYPALVYYHGGGWVVGDLETHDPVCRVLAKDGRAVVFSVDYRLAPEHK 120
Query: 249 IKDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETG------ 302
V+DA + ++ +++ DP RI + G SAG ++AA T + KE G
Sbjct: 121 FPAAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSI--LAKERGGPALAF 178
Query: 303 ----------EGESTTWSVSQIRAYFGLSGGYNLFDLVDHFHSRGLYRSIFLSIMDGEES 352
+ S+ + + L+GG +L+ L + +S EE
Sbjct: 179 QLLIYPSTGYDPAHPPASIEENAEGYLLTGGMSLWFLDQYLNSL-------------EEL 225
Query: 353 LRQYSPEVLVQDPNTRHAVSLLPPIILFHGTADYSIPADASKNFANTLQRVGVRAESILY 412
+ VL D +S LPP + TA Y D K +A L + GV+ E +
Sbjct: 226 THPWFSPVLYPD------LSGLPPAYI--ATAQYDPLRDVGKLYAEALNKAGVKVEIENF 277
Query: 413 EGKTH 417
E H
Sbjct: 278 EDLIH 282
>pdb|1EVQ|A Chain A, The Crystal Structure Of The Thermophilic Carboxylesterase
Est2 From Alicyclobacillus Acidocaldarius
Length = 310
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 102/245 (41%), Gaps = 40/245 (16%)
Query: 190 RLDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERD-IIVACIDYRNFPQGT 248
++ Y P+ + P P + + GG W++G + + L++ +V +DYR P+
Sbjct: 61 KVRXYRPEGVEPPYPALVYYHGGGWVVGDLETHDPVCRVLAKDGRAVVFSVDYRLAPEHK 120
Query: 249 IKDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETG------ 302
V+DA + ++ +++ DP RI + G SAG ++AA T + KE G
Sbjct: 121 FPAAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSI--LAKERGGPALAF 178
Query: 303 ----------EGESTTWSVSQIRAYFGLSGGYNLFDLVDHFHSRGLYRSIFLSIMDGEES 352
+ S+ + + L+GG L+ +R +L+ + EE
Sbjct: 179 QLLIYPSTGYDPAHPPASIEENAEGYLLTGGXXLW-----------FRDQYLNSL--EEL 225
Query: 353 LRQYSPEVLVQDPNTRHAVSLLPPIILFHGTADYSIPADASKNFANTLQRVGVRAESILY 412
+ VL D +S LPP + TA Y D K +A L + GV+ E +
Sbjct: 226 THPWFSPVLYPD------LSGLPPAYI--ATAQYDPLRDVGKLYAEALNKAGVKVEIENF 277
Query: 413 EGKTH 417
E H
Sbjct: 278 EDLIH 282
>pdb|1LZL|A Chain A, Bacterial Heroin Esterase
Length = 323
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
Query: 186 QPRNRLDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLS-ERDIIVACIDYRNF 244
P ++ P ++ GP PV+ +I GG + IG +++ E VA ++YR
Sbjct: 62 DPEVKIRFVTPDNTAGPVPVLLWIHGGGFAIGTAESSDPFCVEVARELGFAVANVEYRLA 121
Query: 245 PQGTIKDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLE 295
P+ T V D + ++ + E G DP RI + GQSAG +AA T+L+
Sbjct: 122 PETTFPGPVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLK 172
>pdb|1LZK|A Chain A, Bacterial Heroin Esterase Complex With Transition State
Analog Dimethylarsenic Acid
Length = 323
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
Query: 186 QPRNRLDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLS-ERDIIVACIDYRNF 244
P ++ P ++ GP PV+ +I GG + IG +++ E VA ++YR
Sbjct: 62 DPEVKIRFVTPDNTAGPVPVLLWIHGGGFAIGTAESSDPFCVEVARELGFAVANVEYRLA 121
Query: 245 PQGTIKDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLE 295
P+ T V D + ++ + E G DP RI + GQSAG +AA T+L+
Sbjct: 122 PETTFPGPVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLK 172
>pdb|2YH2|A Chain A, Pyrobaculum Calidifontis Esterase Monoclinic Form
pdb|2YH2|B Chain B, Pyrobaculum Calidifontis Esterase Monoclinic Form
pdb|2YH2|C Chain C, Pyrobaculum Calidifontis Esterase Monoclinic Form
pdb|2YH2|D Chain D, Pyrobaculum Calidifontis Esterase Monoclinic Form
pdb|3ZWQ|A Chain A, Hyperthermophilic Esterase From The Archeon Pyrobaculum
Calidifontis
pdb|3ZWQ|B Chain B, Hyperthermophilic Esterase From The Archeon Pyrobaculum
Calidifontis
Length = 313
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 105/239 (43%), Gaps = 29/239 (12%)
Query: 190 RLDLYFPKSSDGPK-PVVAFITGGAWIIGYKAWGSLLGQQLSE-RDIIVACIDYRNFPQG 247
R +Y P+ DG + P V + GG +++G + ++L+ +V +DYR P+
Sbjct: 64 RARVYRPR--DGERLPAVVYYHGGGFVLGSVETHDHVCRRLANLSGAVVVSVDYRLAPEH 121
Query: 248 TIKDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGEST 307
V+DA +V +N + G D +I + G SAG ++AA T AI GES
Sbjct: 122 KFPAAVEDAYDAAKWVADNYDKLGVDNGKIAVAGDSAGGNLAAVT----AIMARDRGESF 177
Query: 308 TWSVSQIRAYFGLSGGYNLFDLVDHFHSRGLYRSIFLSIMDGEESL---RQYSPEVLVQD 364
I L+G + SR Y I+ + RQY + QD
Sbjct: 178 VKYQVLIYPAVNLTGSPTV--------SRVEYSGPEYVILTADLMAWFGRQYFSK--PQD 227
Query: 365 PNTRHA------VSLLPPIILFHGTADYSIPADASKNFANTLQRVGVRAESILYEGKTH 417
+ +A +S LPP ++ TA+Y D + +A+ L+ GVRA ++ Y G H
Sbjct: 228 ALSPYASPIFADLSNLPPALVI--TAEYDPLRDEGELYAHLLKTRGVRAVAVRYNGVIH 284
>pdb|1THG|A Chain A, 1.8 Angstroms Refined Structure Of The Lipase From
Geotrichum Candidum
Length = 544
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 72/146 (49%), Gaps = 17/146 (11%)
Query: 177 VRRGIVYGDQPRNRLDLYFPKSS--DGPKPVVAFITGGAWIIGYKA---WGSLLGQQLSE 231
+ +G V ++ L+++ P + D PV+ +I GGA++ G A S + + ++
Sbjct: 94 MAKGTVSMNEDCLYLNVFRPAGTKPDAKLPVMVWIYGGAFVYGSSAAYPGNSYVKESINM 153
Query: 232 -RDIIVACIDYRNFP-----------QGTIKDMVKDASQGISFVCNNISEYGGDPDRIYL 279
+ ++ I+YR P +G + D +G+ +V +NI+ +GGDPD++ +
Sbjct: 154 GQPVVFVSINYRTGPFGFLGGDAITAEGNTNAGLHDQRKGLEWVSDNIANFGGDPDKVMI 213
Query: 280 MGQSAGAHIAACTLLEQAIKETGEGE 305
G+SAGA A L+ T G+
Sbjct: 214 FGESAGAMSVAHQLIAYGGDNTYNGK 239
>pdb|1AQL|A Chain A, Crystal Structure Of Bovine Bile-Salt Activated Lipase
Complexed With Taurocholate
pdb|1AQL|B Chain B, Crystal Structure Of Bovine Bile-Salt Activated Lipase
Complexed With Taurocholate
Length = 532
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 79/159 (49%), Gaps = 28/159 (17%)
Query: 182 VYGDQPRNRLDLYFP---KSSDGPKPVVAFITGGAWIIGYKAWGSLL------GQQLSER 232
YG++ L+++ P K PV+ +I GGA+++G + L G++++ R
Sbjct: 74 TYGNEDCLYLNIWVPQGRKEVSHDLPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATR 133
Query: 233 -DIIVACIDYRNFPQGTIKDM---------VKDASQGISFVCNNISEYGGDPDRIYLMGQ 282
++IV +YR P G + + D I++V NI +GGDPD I L G+
Sbjct: 134 GNVIVVTFNYRVGPLGFLSTGDSNLPGNYGLWDQHMAIAWVKRNIEAFGGDPDNITLFGE 193
Query: 283 SA-GAHIAACT-------LLEQAIKETGEGESTTWSVSQ 313
SA GA ++ T L+++AI ++G G W++ Q
Sbjct: 194 SAGGASVSLQTLSPYNKGLIKRAISQSGVG-LCPWAIQQ 231
>pdb|2BCE|A Chain A, Cholesterol Esterase From Bos Taurus
Length = 579
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 80/159 (50%), Gaps = 28/159 (17%)
Query: 182 VYGDQPRNRLDLYFP---KSSDGPKPVVAFITGGAWIIGYKAWGSLL------GQQLSER 232
YG++ L+++ P K PV+ +I GGA+++G + L G++++ R
Sbjct: 74 TYGNEDCLYLNIWVPQGRKEVSHDLPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATR 133
Query: 233 -DIIVACIDYRNFPQGTIKDM---------VKDASQGISFVCNNISEYGGDPDRIYLMGQ 282
++IV +YR P G + + D I++V NI +GGDPD+I L G+
Sbjct: 134 GNVIVVTFNYRVGPLGFLSTGDSNLPGNYGLWDQHMAIAWVKRNIEAFGGDPDQITLFGE 193
Query: 283 SA-GAHIAACT-------LLEQAIKETGEGESTTWSVSQ 313
SA GA ++ T L+++AI ++G G W++ Q
Sbjct: 194 SAGGASVSLQTLSPYNKGLIKRAISQSGVG-LCPWAIQQ 231
>pdb|1F6W|A Chain A, Structure Of The Catalytic Domain Of Human Bile Salt
Activated Lipase
Length = 533
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 75/148 (50%), Gaps = 27/148 (18%)
Query: 182 VYGDQPRNRLDLYFP---KSSDGPKPVVAFITGGAWIIGYKAWGSLL------GQQLSER 232
YGD+ L+++ P K PV+ +I GGA+++G + L G++++ R
Sbjct: 74 TYGDEDCLYLNIWVPQGRKQVSRDLPVMIWIYGGAFLMGSGHGANFLNNYLYDGEEIATR 133
Query: 233 -DIIVACIDYRNFPQGTIKDM---------VKDASQGISFVCNNISEYGGDPDRIYLMGQ 282
++IV +YR P G + ++D I++V NI+ +GGDPD I L G+
Sbjct: 134 GNVIVVTFNYRVGPLGFLSTGDANLPGNYGLRDQHMAIAWVKRNIAAFGGDPDNITLFGE 193
Query: 283 SA-GAHIAACT-------LLEQAIKETG 302
SA GA ++ T L+ +AI ++G
Sbjct: 194 SAGGASVSLQTLSPYNKGLIRRAISQSG 221
>pdb|1QE3|A Chain A, Pnb Esterase
Length = 489
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 73/153 (47%), Gaps = 25/153 (16%)
Query: 181 IVYGDQPRNRLD-----LYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSER-DI 234
+ Y + PR D ++ P + PV+ +I GGA+ +G + G +L+ + ++
Sbjct: 70 LSYTELPRQSEDCLYVNVFAPDTPSQNLPVMVWIHGGAFYLGAGSEPLYDGSKLAAQGEV 129
Query: 235 IVACIDYRNFPQGTIKDM-----------VKDASQGISFVCNNISEYGGDPDRIYLMGQS 283
IV ++YR P G + + D + + +V NIS +GGDPD + + G+S
Sbjct: 130 IVVTLNYRLGPFGFLHLSSFDEAYSDNLGLLDQAAALKWVRENISAFGGDPDNVTVFGES 189
Query: 284 AG--------AHIAACTLLEQAIKETGEGESTT 308
AG A AA L ++AI E+G + T
Sbjct: 190 AGGMSIAALLAMPAAKGLFQKAIMESGASRTMT 222
>pdb|1C7I|A Chain A, Thermophylic Pnb Esterase
Length = 489
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 73/153 (47%), Gaps = 25/153 (16%)
Query: 181 IVYGDQPRNRLD-----LYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSER-DI 234
+ Y + PR D ++ P + PV+ +I GGA+ +G + G +L+ + ++
Sbjct: 70 LSYKELPRQSEDCLYVNVFAPDTPSQNLPVMVWIHGGAFYLGAGSEPLYDGSKLAAQGEV 129
Query: 235 IVACIDYRNFPQGTIKDM-----------VKDASQGISFVCNNISEYGGDPDRIYLMGQS 283
IV ++YR P G + + D + + +V NIS +GGDPD + + G+S
Sbjct: 130 IVVTLNYRLGPFGFMHLSSFDEAYSDNLGLLDQAAALKWVRENISAFGGDPDNVTVFGES 189
Query: 284 AG--------AHIAACTLLEQAIKETGEGESTT 308
AG A AA L ++AI E+G + T
Sbjct: 190 AGGMSIAALLAMPAAKGLFQKAIMESGASRTMT 222
>pdb|1C7J|A Chain A, Pnb Esterase 56c8
Length = 489
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 73/153 (47%), Gaps = 25/153 (16%)
Query: 181 IVYGDQPRNRLD-----LYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSER-DI 234
+ Y + PR D ++ P + PV+ +I GGA+ +G + G +L+ + ++
Sbjct: 70 LSYTELPRQSEDCLYVNVFAPDTPSQNLPVMVWIHGGAFYLGAGSEPLYDGSKLAAQGEV 129
Query: 235 IVACIDYRNFPQGTIKDM-----------VKDASQGISFVCNNISEYGGDPDRIYLMGQS 283
IV ++YR P G + + D + + +V NIS +GGDPD + + G+S
Sbjct: 130 IVVTLNYRLGPFGFMHLSSFDEAYSDNLGLLDQAAALKWVRENISAFGGDPDNVTVFGES 189
Query: 284 AG--------AHIAACTLLEQAIKETGEGESTT 308
AG A AA L ++AI E+G + T
Sbjct: 190 AGGMSIAALLAMPAAKGLFQKAIMESGASRTMT 222
>pdb|1AKN|A Chain A, Structure Of Bile-salt Activated Lipase
Length = 579
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 79/159 (49%), Gaps = 28/159 (17%)
Query: 182 VYGDQPRNRLDLYFP---KSSDGPKPVVAFITGGAWIIGYKAWGSLL------GQQLSER 232
YG++ L+++ P K PV+ +I GGA+++G + L G++++ R
Sbjct: 74 TYGNEDCLYLNIWVPQGRKEVSHDLPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATR 133
Query: 233 -DIIVACIDYRNFPQGTIKDM---------VKDASQGISFVCNNISEYGGDPDRIYLMGQ 282
++IV +YR P G + + D I++V NI +GGDPD I L G+
Sbjct: 134 GNVIVVTFNYRVGPLGFLSTGDSNLPGNYGLWDQHMAIAWVKRNIEAFGGDPDNITLFGE 193
Query: 283 SA-GAHIAACT-------LLEQAIKETGEGESTTWSVSQ 313
SA GA ++ T L+++AI ++G G W++ Q
Sbjct: 194 SAGGASVSLQTLSPYNKGLIKRAISQSGVG-LCPWAIQQ 231
>pdb|1JMY|A Chain A, Truncated Recombinant Human Bile Salt Stimulated Lipase
Length = 522
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 75/148 (50%), Gaps = 27/148 (18%)
Query: 182 VYGDQPRNRLDLYFP---KSSDGPKPVVAFITGGAWIIGYKAWGSLL------GQQLSER 232
YGD+ L+++ P K PV+ +I GGA+++G + L G++++ R
Sbjct: 74 TYGDEDCLYLNIWVPQGRKQVSRDLPVMIWIYGGAFLMGSGHGANFLNNYLYDGEEIATR 133
Query: 233 -DIIVACIDYRNFPQGTIKDM---------VKDASQGISFVCNNISEYGGDPDRIYLMGQ 282
++IV +YR P G + ++D I++V NI+ +GGDP+ I L G+
Sbjct: 134 GNVIVVTFNYRVGPLGFLSTGDANLPGNYGLRDQHMAIAWVKRNIAAFGGDPNNITLFGE 193
Query: 283 SA-GAHIAACT-------LLEQAIKETG 302
SA GA ++ T L+ +AI ++G
Sbjct: 194 SAGGASVSLQTLSPYNKGLIRRAISQSG 221
>pdb|3BIW|A Chain A, Crystal Structure Of The Neuroligin-1NEUREXIN-1beta
Synaptic Adhesion Complex
pdb|3BIW|B Chain B, Crystal Structure Of The Neuroligin-1NEUREXIN-1beta
Synaptic Adhesion Complex
pdb|3BIW|C Chain C, Crystal Structure Of The Neuroligin-1NEUREXIN-1beta
Synaptic Adhesion Complex
pdb|3BIW|D Chain D, Crystal Structure Of The Neuroligin-1NEUREXIN-1beta
Synaptic Adhesion Complex
pdb|3BIX|A Chain A, Crystal Structure Of The Extracellular Esterase Domain Of
Neuroligin-1
pdb|3BIX|B Chain B, Crystal Structure Of The Extracellular Esterase Domain Of
Neuroligin-1
pdb|3BIX|C Chain C, Crystal Structure Of The Extracellular Esterase Domain Of
Neuroligin-1
pdb|3BIX|D Chain D, Crystal Structure Of The Extracellular Esterase Domain Of
Neuroligin-1
Length = 574
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 70/147 (47%), Gaps = 29/147 (19%)
Query: 191 LDLYFPKSSD-----GPKPVVAFITGGAWIIGYKAW--GSLLGQQLSERDIIVACIDYRN 243
L++Y P D GPKPV+ +I GG+++ G GS+L S ++IV ++YR
Sbjct: 114 LNIYVPTEDDIRDSGGPKPVMVYIHGGSYMEGTGNLYDGSVLA---SYGNVIVITVNYRL 170
Query: 244 FPQGTIKD---------MVKDASQGISFVCNNISEYGGDPDRIYLMGQSAG--------- 285
G + + D Q + + NI +GGDP RI + G AG
Sbjct: 171 GVLGFLSTGDQAAKGNYGLLDLIQALRWTSENIGFFGGDPLRITVFGSGAGGSCVNLLTL 230
Query: 286 AHIAACTLLEQAIKETGEGESTTWSVS 312
+H + L ++AI ++G S +W+VS
Sbjct: 231 SHYSEKGLFQRAIAQSGTALS-SWAVS 256
>pdb|3AIK|A Chain A, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIK|B Chain B, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIK|C Chain C, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIK|D Chain D, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIL|A Chain A, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii Complexed With Paraoxon
pdb|3AIL|B Chain B, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii Complexed With Paraoxon
pdb|3AIL|C Chain C, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii Complexed With Paraoxon
pdb|3AIL|D Chain D, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii Complexed With Paraoxon
Length = 323
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 108/242 (44%), Gaps = 28/242 (11%)
Query: 184 GDQPRNRLDLYFPKSSDGPKPVVAFITGGAWIIG-YKAWGSLLGQQLSERDIIVACIDYR 242
G + + +Y+PK+ GP V+ + GG +++G +++ L + + +DYR
Sbjct: 72 GSETNIKARVYYPKTQ-GPYGVLVYYHGGGFVLGDIESYDPLCRAITNSCQCVTISVDYR 130
Query: 243 NFPQGTIKDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETG 302
P+ V D+ + +V NN ++ G I + G SAG ++AA T AI
Sbjct: 131 LAPENKFPAAVVDSFDALKWVYNNSEKFNGKYG-IAVGGDSAGGNLAAVT----AILSKK 185
Query: 303 EGESTTWSVSQIRAYFGLSGGYNLFDLVDHFHSRGLY---RSIFLSIMD----GEESLRQ 355
E + Q+ Y +S FDL+ ++ LY FL+ G++ LR
Sbjct: 186 ENIKLKY---QVLIYPAVS-----FDLI----TKSLYDNGEGFFLTREHIDWFGQQYLRS 233
Query: 356 YSPEVLVQDPNTRHAVSLLPPIILFHGTADYSIPADASKNFANTLQRVGVRAESILYEGK 415
++ + + ++ LPP ++ TA++ D + +AN L + GV+ S+ +
Sbjct: 234 FADLLDFRFSPILADLNDLPPALII--TAEHDPLRDQGEAYANKLLQSGVQVTSVRFNNV 291
Query: 416 TH 417
H
Sbjct: 292 IH 293
>pdb|3AIO|A Chain A, R267k Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIO|B Chain B, R267k Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIO|C Chain C, R267k Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIO|D Chain D, R267k Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
Length = 323
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 108/242 (44%), Gaps = 28/242 (11%)
Query: 184 GDQPRNRLDLYFPKSSDGPKPVVAFITGGAWIIG-YKAWGSLLGQQLSERDIIVACIDYR 242
G + + +Y+PK+ GP V+ + GG +++G +++ L + + +DYR
Sbjct: 72 GSETNIKARVYYPKTQ-GPYGVLVYYHGGGFVLGDIESYDPLCRAITNSCQCVTISVDYR 130
Query: 243 NFPQGTIKDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETG 302
P+ V D+ + +V NN ++ G I + G SAG ++AA T AI
Sbjct: 131 LAPENKFPAAVVDSFDALKWVYNNSEKFNGKYG-IAVGGDSAGGNLAAVT----AILSKK 185
Query: 303 EGESTTWSVSQIRAYFGLSGGYNLFDLVDHFHSRGLY---RSIFLSIMD----GEESLRQ 355
E + Q+ Y +S FDL+ ++ LY FL+ G++ LR
Sbjct: 186 ENIKLKY---QVLIYPAVS-----FDLI----TKSLYDNGEGFFLTREHIDWFGQQYLRS 233
Query: 356 YSPEVLVQDPNTRHAVSLLPPIILFHGTADYSIPADASKNFANTLQRVGVRAESILYEGK 415
++ + + ++ LPP ++ TA++ D + +AN L + GV+ S+ +
Sbjct: 234 FADLLDFRFSPILADLNDLPPALII--TAEHDPLRDQGEAYANKLLQSGVQVTSVKFNNV 291
Query: 416 TH 417
H
Sbjct: 292 IH 293
>pdb|3AIM|A Chain A, R267e Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIM|B Chain B, R267e Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIM|C Chain C, R267e Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIM|D Chain D, R267e Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
Length = 323
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 108/242 (44%), Gaps = 28/242 (11%)
Query: 184 GDQPRNRLDLYFPKSSDGPKPVVAFITGGAWIIG-YKAWGSLLGQQLSERDIIVACIDYR 242
G + + +Y+PK+ GP V+ + GG +++G +++ L + + +DYR
Sbjct: 72 GSETNIKARVYYPKTQ-GPYGVLVYYHGGGFVLGDIESYDPLCRAITNSCQCVTISVDYR 130
Query: 243 NFPQGTIKDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETG 302
P+ V D+ + +V NN ++ G I + G SAG ++AA T AI
Sbjct: 131 LAPENKFPAAVVDSFDALKWVYNNSEKFNGKYG-IAVGGDSAGGNLAAVT----AILSKK 185
Query: 303 EGESTTWSVSQIRAYFGLSGGYNLFDLVDHFHSRGLY---RSIFLSIMD----GEESLRQ 355
E + Q+ Y +S FDL+ ++ LY FL+ G++ LR
Sbjct: 186 ENIKLKY---QVLIYPAVS-----FDLI----TKSLYDNGEGFFLTREHIDWFGQQYLRS 233
Query: 356 YSPEVLVQDPNTRHAVSLLPPIILFHGTADYSIPADASKNFANTLQRVGVRAESILYEGK 415
++ + + ++ LPP ++ TA++ D + +AN L + GV+ S+ +
Sbjct: 234 FADLLDFRFSPILADLNDLPPALII--TAEHDPLRDQGEAYANKLLQSGVQVTSVEFNNV 291
Query: 416 TH 417
H
Sbjct: 292 IH 293
>pdb|3AIN|A Chain A, R267g Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIN|B Chain B, R267g Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIN|C Chain C, R267g Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIN|D Chain D, R267g Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
Length = 323
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 108/242 (44%), Gaps = 28/242 (11%)
Query: 184 GDQPRNRLDLYFPKSSDGPKPVVAFITGGAWIIG-YKAWGSLLGQQLSERDIIVACIDYR 242
G + + +Y+PK+ GP V+ + GG +++G +++ L + + +DYR
Sbjct: 72 GSETNIKARVYYPKTQ-GPYGVLVYYHGGGFVLGDIESYDPLCRAITNSCQCVTISVDYR 130
Query: 243 NFPQGTIKDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETG 302
P+ V D+ + +V NN ++ G I + G SAG ++AA T AI
Sbjct: 131 LAPENKFPAAVVDSFDALKWVYNNSEKFNGKYG-IAVGGDSAGGNLAAVT----AILSKK 185
Query: 303 EGESTTWSVSQIRAYFGLSGGYNLFDLVDHFHSRGLY---RSIFLSIMD----GEESLRQ 355
E + Q+ Y +S FDL+ ++ LY FL+ G++ LR
Sbjct: 186 ENIKLKY---QVLIYPAVS-----FDLI----TKSLYDNGEGFFLTREHIDWFGQQYLRS 233
Query: 356 YSPEVLVQDPNTRHAVSLLPPIILFHGTADYSIPADASKNFANTLQRVGVRAESILYEGK 415
++ + + ++ LPP ++ TA++ D + +AN L + GV+ S+ +
Sbjct: 234 FADLLDFRFSPILADLNDLPPALII--TAEHDPLRDQGEAYANKLLQSGVQVTSVGFNNV 291
Query: 416 TH 417
H
Sbjct: 292 IH 293
>pdb|3B3Q|A Chain A, Crystal Structure Of A Synaptic Adhesion Complex
pdb|3B3Q|B Chain B, Crystal Structure Of A Synaptic Adhesion Complex
Length = 577
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 67/146 (45%), Gaps = 28/146 (19%)
Query: 191 LDLYFPKSSD-----GPKPVVAFITGGAWIIGYKAW--GSLLGQQLSERDIIVACIDYRN 243
L++Y P D GPKPV+ +I GG+++ G GS+L S ++IV ++YR
Sbjct: 127 LNIYVPTEDDIRDSGGPKPVMVYIHGGSYMEGTGNLYDGSVLA---SYGNVIVITVNYRL 183
Query: 244 FPQGTIKD---------MVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACT-- 292
G + + D Q + + NI +GGDP RI + G AG
Sbjct: 184 GVLGFLSTGDQAAKGNYGLLDLIQALRWTSENIGFFGGDPLRITVFGSGAGGSCVNLLTL 243
Query: 293 ------LLEQAIKETGEGESTTWSVS 312
L ++AI ++G S +W+VS
Sbjct: 244 SHYSEGLFQRAIAQSGTALS-SWAVS 268
>pdb|2OGS|A Chain A, Crystal Structure Of The Geobacillus Stearothermophilus
Carboxylesterase Est55 At Ph 6.2
Length = 498
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 23/137 (16%)
Query: 191 LDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSER-DIIVACIDYR------- 242
L+++ P + +PV+ +I GGA++ G + G ++ D++V I+YR
Sbjct: 87 LNIWSPAADGKKRPVLFWIHGGAFLFGSGSSPWYDGTAFAKHGDVVVVTINYRMNVFGFL 146
Query: 243 ----NFPQGTIKDM---VKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIA------ 289
+F + + + D + +V NI+ +GGDPD I + G+SAGA
Sbjct: 147 HLGDSFGEAYAQAGNLGILDQVAALRWVKENIAAFGGDPDNITIFGESAGAASVGVLLSL 206
Query: 290 --ACTLLEQAIKETGEG 304
A L +A+ ++G G
Sbjct: 207 PEASGLFRRAMLQSGSG 223
>pdb|2OGT|A Chain A, Crystal Structure Of The Geobacillus Stearothermophilus
Carboxylesterase Est55 At Ph 6.8
Length = 498
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 23/137 (16%)
Query: 191 LDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSER-DIIVACIDYR------- 242
L+++ P + +PV+ +I GGA++ G + G ++ D++V I+YR
Sbjct: 87 LNIWSPAADGKKRPVLFWIHGGAFLFGSGSSPWYDGTAFAKHGDVVVVTINYRMNVFGFL 146
Query: 243 ----NFPQGTIKDM---VKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIA------ 289
+F + + + D + +V NI+ +GGDPD I + G+SAGA
Sbjct: 147 HLGDSFGEAYAQAGNLGILDQVAALRWVKENIAAFGGDPDNITIFGESAGAASVGVLLSL 206
Query: 290 --ACTLLEQAIKETGEG 304
A L +A+ ++G G
Sbjct: 207 PEASGLFRRAMLQSGSG 223
>pdb|3BL8|A Chain A, Crystal Structure Of The Extracellular Domain Of
Neuroligin 2a From Mouse
pdb|3BL8|B Chain B, Crystal Structure Of The Extracellular Domain Of
Neuroligin 2a From Mouse
pdb|3BL8|C Chain C, Crystal Structure Of The Extracellular Domain Of
Neuroligin 2a From Mouse
pdb|3BL8|D Chain D, Crystal Structure Of The Extracellular Domain Of
Neuroligin 2a From Mouse
Length = 580
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 65/131 (49%), Gaps = 23/131 (17%)
Query: 201 GPKPVVAFITGGAWIIGYKAW--GSLLGQQLSERDIIVACIDYRNFPQGTIKDM------ 252
G KPV+ F+ GG+++ G GS+L + ++IV ++YR G +
Sbjct: 136 GKKPVMLFLHGGSYMEGTGNMFDGSVLA---AYGNVIVVTLNYRLGVLGFLSTGDQAAKG 192
Query: 253 ---VKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLL--------EQAIKET 301
+ D Q + ++ NI+ +GGDP+RI + G AGA +L ++AI ++
Sbjct: 193 NYGLLDQIQALRWLSENIAHFGGDPERITIFGSGAGASCVNLLILSHHSEGLFQKAIAQS 252
Query: 302 GEGESTTWSVS 312
G S +WSV+
Sbjct: 253 GTAIS-SWSVN 262
>pdb|3VKF|A Chain A, Crystal Structure Of Neurexin 1betaNEUROLIGIN 1 COMPLEX
pdb|3VKF|B Chain B, Crystal Structure Of Neurexin 1betaNEUROLIGIN 1 COMPLEX
Length = 585
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 23/135 (17%)
Query: 197 KSSDGPKPVVAFITGGAWIIGYKAW--GSLLGQQLSERDIIVACIDYRNFPQGTIKD--- 251
+ S GPKPV+ +I GG+++ G GS+L S ++IV ++YR G +
Sbjct: 143 RDSGGPKPVMVYIHGGSYMEGTGNLYDGSVLA---SYGNVIVITVNYRLGVLGFLSTGDQ 199
Query: 252 ------MVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACT--------LLEQA 297
+ D Q + + NI +GGDP RI + G AG L ++A
Sbjct: 200 AAKGNYGLLDLIQALRWTSENIGFFGGDPLRITVFGSGAGGSCVNLLTLSHYSEGLFQRA 259
Query: 298 IKETGEGESTTWSVS 312
I ++G S +W+VS
Sbjct: 260 IAQSGTALS-SWAVS 273
>pdb|3BE8|A Chain A, Crystal Structure Of The Synaptic Protein Neuroligin 4
pdb|3BE8|B Chain B, Crystal Structure Of The Synaptic Protein Neuroligin 4
pdb|2WQZ|A Chain A, Crystal Structure Of Synaptic Protein Neuroligin-4 In
Complex With Neurexin-beta 1: Alternative Refinement
pdb|2WQZ|B Chain B, Crystal Structure Of Synaptic Protein Neuroligin-4 In
Complex With Neurexin-beta 1: Alternative Refinement
pdb|2XB6|A Chain A, Revisited Crystal Structure Of Neurexin1beta-neuroligin4
Complex
pdb|2XB6|B Chain B, Revisited Crystal Structure Of Neurexin1beta-neuroligin4
Complex
Length = 588
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 75/169 (44%), Gaps = 32/169 (18%)
Query: 191 LDLYFPKSSD-----GPKPVVAFITGGAWIIGYKAW--GSLLGQQLSERDIIVACIDYRN 243
L++Y P D KPV+ +I GG+++ G GS+L S ++IV I+YR
Sbjct: 118 LNIYVPTEDDIHDQNSKKPVMVYIHGGSYMEGTGNMIDGSILA---SYGNVIVITINYRL 174
Query: 244 FPQGTIKDM---------VKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACT-- 292
G + + D Q + ++ N+ +GGDP R+ + G AGA +
Sbjct: 175 GILGFLSTGDQAAKGNYGLLDQIQALRWIEENVGAFGGDPKRVTIFGSGAGASCVSLLTL 234
Query: 293 ------LLEQAIKETGEGESTTWSVSQIRAYF----GLSGGYNLFDLVD 331
L ++AI ++G S +W+V+ A + G N+ D D
Sbjct: 235 SHYSEGLFQKAIIQSGTALS-SWAVNYQPAKYTRILADKVGCNMLDTTD 282
>pdb|2PBL|A Chain A, Crystal Structure Of A Putative Thioesterase (Tm1040_2492)
From Silicibacter Sp. Tm1040 At 1.79 A Resolution
pdb|2PBL|B Chain B, Crystal Structure Of A Putative Thioesterase (Tm1040_2492)
From Silicibacter Sp. Tm1040 At 1.79 A Resolution
pdb|2PBL|C Chain C, Crystal Structure Of A Putative Thioesterase (Tm1040_2492)
From Silicibacter Sp. Tm1040 At 1.79 A Resolution
pdb|2PBL|D Chain D, Crystal Structure Of A Putative Thioesterase (Tm1040_2492)
From Silicibacter Sp. Tm1040 At 1.79 A Resolution
Length = 262
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 54/129 (41%), Gaps = 8/129 (6%)
Query: 173 FSSQVRRGIVYGDQPRNRLDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSER 232
+ R + YG+ R++ DL+ P+ + P + F+ GG W K+ S L +
Sbjct: 35 LQDRARLNLSYGEGDRHKFDLFLPEGT--PVGLFVFVHGGYWXAFDKSSWSHLAVGALSK 92
Query: 233 DIIVACIDYRNFPQGTIKDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACT 292
VA Y P+ I ++ + SQ ++ I I L G SAG H+ A
Sbjct: 93 GWAVAXPSYELCPEVRISEITQQISQAVTAAAKEID------GPIVLAGHSAGGHLVARX 146
Query: 293 LLEQAIKET 301
L + + E
Sbjct: 147 LDPEVLPEA 155
>pdb|1JJI|A Chain A, The Crystal Structure Of A Hyper-Thermophilic
Carboxylesterase From The Archaeon Archaeoglobus
Fulgidus
pdb|1JJI|B Chain B, The Crystal Structure Of A Hyper-Thermophilic
Carboxylesterase From The Archaeon Archaeoglobus
Fulgidus
pdb|1JJI|C Chain C, The Crystal Structure Of A Hyper-Thermophilic
Carboxylesterase From The Archaeon Archaeoglobus
Fulgidus
pdb|1JJI|D Chain D, The Crystal Structure Of A Hyper-Thermophilic
Carboxylesterase From The Archaeon Archaeoglobus
Fulgidus
Length = 311
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 102/237 (43%), Gaps = 26/237 (10%)
Query: 204 PVVAFITGGAWIIGYKAWGSLLGQQLSE-RDIIVACIDYRNFPQGTIKDMVKDASQGISF 262
PV+ + GG ++I L ++++ + V +DYR P+ V D +
Sbjct: 80 PVLVYYHGGGFVICSIESHDALCRRIARLSNSTVVSVDYRLAPEHKFPAAVYDCYDATKW 139
Query: 263 VCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSG 322
V N E DP +I++ G SAG ++AA + +++GE + QI Y ++
Sbjct: 140 VAENAEELRIDPSKIFVGGDSAGGNLAAAVSI--MARDSGE----DFIKHQILIYPVVNF 193
Query: 323 GYNLFDLVDHFHSRGLYRSIFLSIMDGEESLRQYSPEVLVQDPNTRHAVSL--------L 374
L++ GL+ I+D ++ + +S + ++ + + ++ L
Sbjct: 194 VAPTPSLLE--FGEGLW------ILD-QKIMSWFSEQYFSREEDKFNPLASVIFADLENL 244
Query: 375 PPIILFHGTADYSIPADASKNFANTLQRVGVRAESILYEGKTHTDLFLQDPMRGGKD 431
PP ++ TA+Y D + F L+R GV A + Y G H + ++ +D
Sbjct: 245 PPALII--TAEYDPLRDEGEVFGQMLRRAGVEASIVRYRGVLHGFINYYPVLKAARD 299
>pdb|2FJ0|A Chain A, Crystal Structure Of Juvenile Hormone Esterase From
Manduca Sexta, With Otfp Covalently Attached
Length = 551
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 59/132 (44%), Gaps = 17/132 (12%)
Query: 204 PVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACIDYRNFPQGTI---------KDMVK 254
PV+ FI GG + G + L +D+IV +YR G + ++
Sbjct: 116 PVLVFIHGGGFAFGSGDSDLHGPEYLVSKDVIVITFNYRLNVYGFLSLNSTSVPGNAGLR 175
Query: 255 DASQGISFVCNNISEYGGDPDRIYLMGQSAGA---HI-----AACTLLEQAIKETGEGES 306
D + +V N +GG PD + LMGQSAGA HI AA L +AI +G S
Sbjct: 176 DMVTLLKWVQRNAHFFGGRPDDVTLMGQSAGAAATHILSLSKAADGLFRRAILMSGTSSS 235
Query: 307 TTWSVSQIRAYF 318
++ + + A +
Sbjct: 236 AFFTTNPVFAQY 247
>pdb|1CLE|A Chain A, Structure Of Uncomplexed And Linoleate-Bound Candida
Cylindracea Cholesterol Esterase
pdb|1CLE|B Chain B, Structure Of Uncomplexed And Linoleate-Bound Candida
Cylindracea Cholesterol Esterase
Length = 534
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 77/184 (41%), Gaps = 26/184 (14%)
Query: 204 PVVAFITGGAWIIG----YKAWGSLLGQQLSERDIIVACIDYR----NF-------PQGT 248
PV+ +I GG + IG + + L + II ++YR F +G+
Sbjct: 115 PVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGDDIKAEGS 174
Query: 249 IKDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTT 308
+KD G+ +V +NI+ +GGDP ++ + G+SAG+ C L+ +G++T
Sbjct: 175 GNAGLKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWN------DGDNTY 228
Query: 309 WSVSQIRAYFGLSGGYNLFDLVDHFHSRGLYRSIFLSIMDGEES-----LRQYSPEVLVQ 363
RA SG D VD + +Y S G S LR S + L+
Sbjct: 229 KGKPLFRAGIMQSGAMVPSDPVDGTYGNEIYDLFVSSAGCGSASDKLACLRSASSDTLLD 288
Query: 364 DPNT 367
N
Sbjct: 289 ATNN 292
>pdb|1LLF|A Chain A, Cholesterol Esterase (Candida Cylindracea) Crystal
Structure At 1.4a Resolution
pdb|1LLF|B Chain B, Cholesterol Esterase (Candida Cylindracea) Crystal
Structure At 1.4a Resolution
Length = 534
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 77/184 (41%), Gaps = 26/184 (14%)
Query: 204 PVVAFITGGAWIIG----YKAWGSLLGQQLSERDIIVACIDYR----NF-------PQGT 248
PV+ +I GG + IG + + L + II ++YR F +G+
Sbjct: 115 PVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGDDIKAEGS 174
Query: 249 IKDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEGESTT 308
+KD G+ +V +NI+ +GGDP ++ + G+SAG+ C L+ +G++T
Sbjct: 175 GNAGLKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWN------DGDNTY 228
Query: 309 WSVSQIRAYFGLSGGYNLFDLVDHFHSRGLYRSIFLSIMDGEES-----LRQYSPEVLVQ 363
RA SG D VD + +Y S G S LR S + L+
Sbjct: 229 KGKPLFRAGIMQSGAMVPSDPVDGTYGNEIYDLFVSSAGCGSASDKLACLRSASSDTLLD 288
Query: 364 DPNT 367
N
Sbjct: 289 ATNN 292
>pdb|1LPM|A Chain A, A Structural Basis For The Chiral Preferences Of Lipases
pdb|1LPN|A Chain A, Analogs Of Reaction Intermediates Identify A Unique
Substrate Binding Site In Candida Rugosa Lipase
pdb|1LPO|A Chain A, Analogs Of Reaction Intermediates Identify A Unique
Substrate Binding Site In Candida Rugosa Lipase
pdb|1LPP|A Chain A, Analogs Of Reaction Intermediates Identify A Unique
Substrate Binding Site In Candida Rugosa Lipase
pdb|1LPS|A Chain A, A Structural Basis For The Chiral Preferences Of Lipases
Length = 549
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 53/121 (43%), Gaps = 20/121 (16%)
Query: 219 KAWGSLLGQQLSERDIIVACIDYRNFPQGTIKDMVKDASQGISFVCNNISEYGGDPDRIY 278
+WG L G ++ +G+ +KD G+ +V +NI+ +GGDP ++
Sbjct: 174 SSWGFLAGDEIKA--------------EGSANAGLKDQRLGMQWVADNIAAFGGDPTKVT 219
Query: 279 LMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGYNLFDLVDHFHSRGL 338
+ G+SAG+ C +L +G++T RA SG D VD + +
Sbjct: 220 IFGESAGSMSVMCHILWN------DGDNTYKGKPLFRAGIMQSGAMVPSDAVDGIYGNEI 273
Query: 339 Y 339
+
Sbjct: 274 F 274
>pdb|1CRL|A Chain A, Insights Into Interfacial Activation From An 'open'
Structure Of Candida Rugosa Lipase
pdb|1TRH|A Chain A, Two Conformational States Of Candida Rugosa Lipase
pdb|3RAR|A Chain A, X-Ray Structure Of A Bound Phosphonate Transition State
Analog And Enantioselectivity Of Candida Rugosa Lipase
Toward Chiral Carboxylic Acids
Length = 534
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 53/121 (43%), Gaps = 20/121 (16%)
Query: 219 KAWGSLLGQQLSERDIIVACIDYRNFPQGTIKDMVKDASQGISFVCNNISEYGGDPDRIY 278
+WG L G ++ +G+ +KD G+ +V +NI+ +GGDP ++
Sbjct: 159 SSWGFLAGDEIKA--------------EGSANAGLKDQRLGMQWVADNIAAFGGDPTKVT 204
Query: 279 LMGQSAGAHIAACTLLEQAIKETGEGESTTWSVSQIRAYFGLSGGYNLFDLVDHFHSRGL 338
+ G+SAG+ C +L +G++T RA SG D VD + +
Sbjct: 205 IFGESAGSMSVMCHILWN------DGDNTYKGKPLFRAGIMQSGAMVPSDAVDGIYGNEI 258
Query: 339 Y 339
+
Sbjct: 259 F 259
>pdb|1K4Y|A Chain A, Crystal Structure Of Rabbit Liver Carboxylesterase In
Complex With 4- Piperidino-Piperidine
Length = 534
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 26/134 (19%)
Query: 191 LDLYFPK--SSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLS-ERDIIVACIDYR----- 242
L++Y P + G PV+ +I GG ++G + + G LS +++V I YR
Sbjct: 97 LNIYTPADLTKRGRLPVMVWIHGGGLMVGGAS--TYDGLALSAHENVVVVTIQYRLGIWG 154
Query: 243 ------NFPQGTIKDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLL-- 294
+G + D + +V +NI+ +GGDP + + G+SAG + LL
Sbjct: 155 FFSTGDEHSRGNWGHL--DQVAALRWVQDNIANFGGDPGSVTIFGESAGGQSVSILLLSP 212
Query: 295 ------EQAIKETG 302
+AI E+G
Sbjct: 213 LTKNLFHRAISESG 226
>pdb|1F8U|A Chain A, Crystal Structure Of Mutant E202q Of Human
Acetylcholinesterase Complexed With Green Mamba Venom
Peptide Fasciculin-ii
Length = 583
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 54/112 (48%), Gaps = 14/112 (12%)
Query: 195 FPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQL--SERDIIVACIDYRNFPQGTI--- 249
+P+ + P PV+ +I GG + G + G+ L +ER ++V+ ++YR G +
Sbjct: 105 YPRPTS-PTPVLVWIYGGGFYSGASSLDVYDGRFLVQAERTVLVS-MNYRVGAFGFLALP 162
Query: 250 -------KDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLL 294
+ D + +V N++ +GGDP + L GQSAGA LL
Sbjct: 163 GSREAPGNVGLLDQRLALQWVQENVAAFGGDPTSVTLFGQSAGAASVGMHLL 214
>pdb|2WSL|A Chain A, Aged Form Of Human Butyrylcholinesterase Inhibited By
Tabun Analogue Ta4
pdb|1XLU|A Chain A, X-Ray Structure Of Di-Isopropyl-Phosphoro-Fluoridate (Dfp)
Inhibited Butyrylcholinesterase After Aging
pdb|1XLV|A Chain A, Ethylphosphorylated Butyrylcholinesterase (Aged) Obtained
By Reaction With Echothiophate
pdb|1XLW|A Chain A, Diethylphosphorylated Butyrylcholinesterase (Nonaged)
Obtained By Reaction With Echothiophate
Length = 529
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 11/115 (9%)
Query: 191 LDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERD-IIVACIDYR------- 242
L+++ P V+ +I GG + G + G+ L+ + +IV ++YR
Sbjct: 95 LNVWIPAPKPKNATVLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFL 154
Query: 243 ---NFPQGTIKDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLL 294
P+ + D + +V NI+ +GG+P + L G+SAGA + LL
Sbjct: 155 ALPGNPEAPGNMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLL 209
>pdb|2J4C|A Chain A, Structure Of Human Butyrylcholinesterase In Complex With
10mm Hgcl2
Length = 529
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 11/115 (9%)
Query: 191 LDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERD-IIVACIDYR------- 242
L+++ P V+ +I GG + G + G+ L+ + +IV ++YR
Sbjct: 95 LNVWIPAPKPKNATVLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFL 154
Query: 243 ---NFPQGTIKDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLL 294
P+ + D + +V NI+ +GG+P + L G+SAGA + LL
Sbjct: 155 ALPGNPEAPGNMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLL 209
>pdb|4AQD|A Chain A, Crystal Structure Of Fully Glycosylated Human
Butyrylcholinesterase
pdb|4AQD|B Chain B, Crystal Structure Of Fully Glycosylated Human
Butyrylcholinesterase
Length = 531
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 11/115 (9%)
Query: 191 LDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERD-IIVACIDYR------- 242
L+++ P V+ +I GG + G + G+ L+ + +IV ++YR
Sbjct: 97 LNVWIPAPKPKNATVLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFL 156
Query: 243 ---NFPQGTIKDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLL 294
P+ + D + +V NI+ +GG+P + L G+SAGA + LL
Sbjct: 157 ALPGNPEAPGNMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLL 211
>pdb|2WID|A Chain A, Nonaged Form Of Human Butyrylcholinesterase Inhibited By
Tabun Analogue Ta1
pdb|2WIG|A Chain A, Nonaged Form Of Human Butyrylcholinesterase Inhibited By
Tabun Analogue Ta4
Length = 529
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 11/115 (9%)
Query: 191 LDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERD-IIVACIDYR------- 242
L+++ P V+ +I GG + G + G+ L+ + +IV ++YR
Sbjct: 95 LNVWIPAPKPKNATVLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFL 154
Query: 243 ---NFPQGTIKDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLL 294
P+ + D + +V NI+ +GG+P + L G+SAGA + LL
Sbjct: 155 ALPGNPEAPGNMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLL 209
>pdb|2WIF|A Chain A, Aged Form Of Human Butyrylcholinesterase Inhibited By
Tabun Analogue Ta1
pdb|2WIJ|A Chain A, Nonaged Form Of Human Butyrylcholinesterase Inhibited By
Tabun Analogue Ta5
pdb|2WIK|A Chain A, Nonaged Form Of Human Butyrylcholinesterase Inhibited By
Tabun Analogue Ta6
pdb|4BBZ|A Chain A, Structure Of Human Butyrylcholinesterase Inhibited By Cbdp
( 2-min Soak): Cresyl-phosphoserine Adduct
Length = 529
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 11/115 (9%)
Query: 191 LDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERD-IIVACIDYR------- 242
L+++ P V+ +I GG + G + G+ L+ + +IV ++YR
Sbjct: 95 LNVWIPAPKPKNATVLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFL 154
Query: 243 ---NFPQGTIKDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLL 294
P+ + D + +V NI+ +GG+P + L G+SAGA + LL
Sbjct: 155 ALPGNPEAPGNMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLL 209
>pdb|1P0I|A Chain A, Crystal Structure Of Human Butyryl Cholinesterase
pdb|1P0M|A Chain A, Crystal Structure Of Human Butyryl Cholinesterase In
Complex With A Choline Molecule
pdb|1P0P|A Chain A, Crystal Structure Of Soman-Aged Human Butyryl
Cholinesterase In Complex With The Substrate Analog
Butyrylthiocholine
pdb|1P0Q|A Chain A, Crystal Structure Of Soman-Aged Human Butyryl
Cholinesterase
Length = 529
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 11/115 (9%)
Query: 191 LDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERD-IIVACIDYR------- 242
L+++ P V+ +I GG + G + G+ L+ + +IV ++YR
Sbjct: 95 LNVWIPAPKPKNATVLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFL 154
Query: 243 ---NFPQGTIKDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLL 294
P+ + D + +V NI+ +GG+P + L G+SAGA + LL
Sbjct: 155 ALPGNPEAPGNMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLL 209
>pdb|2WIL|A Chain A, Aged Form Of Human Butyrylcholinesterase Inhibited By
Tabun Analogue Ta5
pdb|2WIL|B Chain B, Aged Form Of Human Butyrylcholinesterase Inhibited By
Tabun Analogue Ta5
Length = 529
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 11/115 (9%)
Query: 191 LDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERD-IIVACIDYR------- 242
L+++ P V+ +I GG + G + G+ L+ + +IV ++YR
Sbjct: 95 LNVWIPAPKPKNATVLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFL 154
Query: 243 ---NFPQGTIKDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLL 294
P+ + D + +V NI+ +GG+P + L G+SAGA + LL
Sbjct: 155 ALPGNPEAPGNMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLL 209
>pdb|2XQF|A Chain A, X-Ray Structure Of Human Butyrylcholinesterase Inhibited
By Racemic Vx
pdb|2XQG|A Chain A, X-Ray Structure Of Human Butyrylcholinesterase Inhibited
By Racemic Vr
pdb|2XQI|A Chain A, X-Ray Structure Of Human Butyrylcholinesterase Inhibited
By Racemic Cvx
pdb|2XQJ|A Chain A, X-Ray Structure Of Human Butyrylcholinesterase Inhibited
By Pure Enantiomer Vx-(R)
pdb|2XQK|A Chain A, X-Ray Structure Of Human Butyrylcholinesterase Inhibited
By Pure Enantiomer Vx-(S)
Length = 527
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 11/115 (9%)
Query: 191 LDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERD-IIVACIDYR------- 242
L+++ P V+ +I GG + G + G+ L+ + +IV ++YR
Sbjct: 93 LNVWIPAPKPKNATVLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFL 152
Query: 243 ---NFPQGTIKDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLL 294
P+ + D + +V NI+ +GG+P + L G+SAGA + LL
Sbjct: 153 ALPGNPEAPGNMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLL 207
>pdb|2O7R|A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With
Acyl Adduct
pdb|2O7V|A Chain A, Carboxylesterase Aecxe1 From Actinidia Eriantha Covalently
Inhibited By Paraoxon
Length = 338
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 45/92 (48%), Gaps = 6/92 (6%)
Query: 204 PVVAFITGGAWIIGYKA---WGSLLGQQLSERDIIVACIDYRNFPQGTIKDMVKDASQGI 260
P+V + GG +I+ A + + +++A +DYR P+ + DA + +
Sbjct: 84 PLVVYFHGGGFILFSAASTIFHDFCCEMAVHAGVVIASVDYRLAPEHRLPAAYDDAMEAL 143
Query: 261 SFVCNNISEY---GGDPDRIYLMGQSAGAHIA 289
++ ++ E+ D ++MG+SAG +IA
Sbjct: 144 QWIKDSRDEWLTNFADFSNCFIMGESAGGNIA 175
>pdb|1B41|A Chain A, Human Acetylcholinesterase Complexed With Fasciculin-Ii,
Glycosylated Protein
Length = 539
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 14/112 (12%)
Query: 195 FPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQL--SERDIIVACIDYRNFPQGTI--- 249
+P+ + P PV+ +I GG + G + G+ L +ER ++V+ ++YR G +
Sbjct: 101 YPRPTS-PTPVLVWIYGGGFYSGASSLDVYDGRFLVQAERTVLVS-MNYRVGAFGFLALP 158
Query: 250 -------KDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLL 294
+ D + +V N++ +GGDP + L G+SAGA LL
Sbjct: 159 GSREAPGNVGLLDQRLALQWVQENVAAFGGDPTSVTLFGESAGAASVGMHLL 210
>pdb|4EY4|A Chain A, Crystal Structure Of Recombinant Human
Acetylcholinesterase In The Apo State
pdb|4EY4|B Chain B, Crystal Structure Of Recombinant Human
Acetylcholinesterase In The Apo State
pdb|4EY5|A Chain A, Crystal Structure Of Recombinant Human
Acetylcholinesterase In Complex With (-)-Huperzine A
pdb|4EY5|B Chain B, Crystal Structure Of Recombinant Human
Acetylcholinesterase In Complex With (-)-Huperzine A
pdb|4EY6|A Chain A, Crystal Structure Of Recombinant Human
Acetylcholinesterase In Complex With (-)-Galantamine
pdb|4EY6|B Chain B, Crystal Structure Of Recombinant Human
Acetylcholinesterase In Complex With (-)-Galantamine
pdb|4EY7|A Chain A, Crystal Structure Of Recombinant Human
Acetylcholinesterase In Complex With Donepezil
pdb|4EY7|B Chain B, Crystal Structure Of Recombinant Human
Acetylcholinesterase In Complex With Donepezil
pdb|4EY8|A Chain A, Crystal Structure Of Recombinant Human
Acetylcholinesterase In Complex With Fasciculin-2
Length = 542
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 14/112 (12%)
Query: 195 FPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQL--SERDIIVACIDYRNFPQGTI--- 249
+P+ + P PV+ +I GG + G + G+ L +ER ++V+ ++YR G +
Sbjct: 104 YPRPTS-PTPVLVWIYGGGFYSGASSLDVYDGRFLVQAERTVLVS-MNYRVGAFGFLALP 161
Query: 250 -------KDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLL 294
+ D + +V N++ +GGDP + L G+SAGA LL
Sbjct: 162 GSREAPGNVGLLDQRLALQWVQENVAAFGGDPTSVTLFGESAGAASVGMHLL 213
>pdb|3O9M|A Chain A, Co-Crystallization Studies Of Full Length Recombinant Bche
With Cocaine Offers Insights Into Cocaine Detoxification
pdb|3O9M|B Chain B, Co-Crystallization Studies Of Full Length Recombinant Bche
With Cocaine Offers Insights Into Cocaine Detoxification
Length = 574
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 11/115 (9%)
Query: 191 LDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERD-IIVACIDYR------- 242
L+++ P V+ +I GG + G + G+ L+ + +IV ++YR
Sbjct: 95 LNVWIPAPKPKNATVLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFL 154
Query: 243 ---NFPQGTIKDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLL 294
P+ + D + +V NI+ +GG+P + L G+SAGA + LL
Sbjct: 155 ALPGNPEAPGNMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLL 209
>pdb|3LII|A Chain A, Recombinant Human Acetylcholinesterase
pdb|3LII|B Chain B, Recombinant Human Acetylcholinesterase
Length = 540
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 14/112 (12%)
Query: 195 FPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQL--SERDIIVACIDYRNFPQGTI--- 249
+P+ + P PV+ +I GG + G + G+ L +ER ++V+ ++YR G +
Sbjct: 102 YPRPTS-PTPVLVWIYGGGFYSGASSLDVYDGRFLVQAERTVLVS-MNYRVGAFGFLALP 159
Query: 250 -------KDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLL 294
+ D + +V N++ +GGDP + L G+SAGA LL
Sbjct: 160 GSREAPGNVGLLDQRLALQWVQENVAAFGGDPTSVTLFGESAGAASVGMHLL 211
>pdb|2PM8|A Chain A, Crystal Structure Of Recombinant Full Length Human
Butyrylcholinesterase
pdb|2PM8|B Chain B, Crystal Structure Of Recombinant Full Length Human
Butyrylcholinesterase
Length = 574
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 11/115 (9%)
Query: 191 LDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERD-IIVACIDYR------- 242
L+++ P V+ +I GG + G + G+ L+ + +IV ++YR
Sbjct: 95 LNVWIPAPKPKNATVLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFL 154
Query: 243 ---NFPQGTIKDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLL 294
P+ + D + +V NI+ +GG+P + L G+SAGA + LL
Sbjct: 155 ALPGNPEAPGNMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLL 209
>pdb|1Q83|A Chain A, Crystal Structure Of The Mouse Acetylcholinesterase-Tz2pa6
Syn Complex
pdb|1Q83|B Chain B, Crystal Structure Of The Mouse Acetylcholinesterase-Tz2pa6
Syn Complex
pdb|1Q84|A Chain A, Crystal Structure Of The Mouse Acetylcholinesterase-Tz2pa6
Anti Complex
pdb|1Q84|B Chain B, Crystal Structure Of The Mouse Acetylcholinesterase-Tz2pa6
Anti Complex
Length = 580
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 94/219 (42%), Gaps = 56/219 (25%)
Query: 195 FPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERD-IIVACIDYRNFPQGTIKDMV 253
+P+ + P PV+ +I GG + G + G+ L++ + ++ ++YR GT +
Sbjct: 136 YPRPAS-PTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYR---VGTFGFLA 191
Query: 254 KDASQ-------------GISFVCNNISEYGGDPDRIYLMGQSAGA-----HIAAC---T 292
S+ + +V NI+ +GGDP + L G+SAGA HI + +
Sbjct: 192 LPGSREAPGNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRS 251
Query: 293 LLEQAIKETG--EGESTTWSVSQIRAYFGL-----------SGGYNLF-----------D 328
L +A+ ++G G T S + R L +GG + D
Sbjct: 252 LFHRAVLQSGTPNGPWATVSAGEARRRATLLARLVGCPPGGAGGNDTELIACLRTRPAQD 311
Query: 329 LVDH-FH---SRGLYRSIFLSIMDGEESLRQYSPEVLVQ 363
LVDH +H ++R F+ ++DG+ +PE L+
Sbjct: 312 LVDHEWHVLPQESIFRFSFVPVVDGD--FLSDTPEALIN 348
>pdb|4A16|A Chain A, Structure Of Mouse Acetylcholinesterase Complex With
Huprine Derivative
pdb|4A16|B Chain B, Structure Of Mouse Acetylcholinesterase Complex With
Huprine Derivative
pdb|4A16|C Chain C, Structure Of Mouse Acetylcholinesterase Complex With
Huprine Derivative
pdb|4A16|D Chain D, Structure Of Mouse Acetylcholinesterase Complex With
Huprine Derivative
Length = 545
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 94/219 (42%), Gaps = 56/219 (25%)
Query: 195 FPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERD-IIVACIDYRNFPQGTIKDMV 253
+P+ + P PV+ +I GG + G + G+ L++ + ++ ++YR GT +
Sbjct: 102 YPRPAS-PTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYR---VGTFGFLA 157
Query: 254 KDASQ-------------GISFVCNNISEYGGDPDRIYLMGQSAGA-----HIAAC---T 292
S+ + +V NI+ +GGDP + L G+SAGA HI + +
Sbjct: 158 LPGSREAPGNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRS 217
Query: 293 LLEQAIKETG--EGESTTWSVSQIRAYFGL-----------SGGYNLF-----------D 328
L +A+ ++G G T S + R L +GG + D
Sbjct: 218 LFHRAVLQSGTPNGPWATVSAGEARRRATLLARLVGCPPGGAGGNDTELIACLRTRPAQD 277
Query: 329 LVDH-FH---SRGLYRSIFLSIMDGEESLRQYSPEVLVQ 363
LVDH +H ++R F+ ++DG+ +PE L+
Sbjct: 278 LVDHEWHVLPQESIFRFSFVPVVDGD--FLSDTPEALIN 314
>pdb|1C2B|A Chain A, Electrophorus Electricus Acetylcholinesterase
Length = 540
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 94/219 (42%), Gaps = 56/219 (25%)
Query: 195 FPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERD-IIVACIDYRNFPQGTIKDMV 253
+P+ + P PV+ +I GG + G + G+ L++ + ++ ++YR GT +
Sbjct: 102 YPRPAS-PTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYR---VGTFGFLA 157
Query: 254 KDASQ-------------GISFVCNNISEYGGDPDRIYLMGQSAGA-----HIAAC---T 292
S+ + +V NI+ +GGDP + L G+SAGA HI + +
Sbjct: 158 LPGSREAPGNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRS 217
Query: 293 LLEQAIKETG--EGESTTWSVSQIRAYFGL-----------SGGYNLF-----------D 328
L +A+ ++G G T S + R L +GG + D
Sbjct: 218 LFHRAVLQSGTPNGPWATVSAGEARRRATLLARLVGCPPGGAGGNDTELIACLRTRPAQD 277
Query: 329 LVDH-FH---SRGLYRSIFLSIMDGEESLRQYSPEVLVQ 363
LVDH +H ++R F+ ++DG+ +PE L+
Sbjct: 278 LVDHEWHVLPQESIFRFSFVPVVDGD--FLSDTPEALIN 314
>pdb|2XUD|A Chain A, Crystal Structure Of The Y337a Mutant Of Mouse
Acetylcholinesterase
pdb|2XUD|B Chain B, Crystal Structure Of The Y337a Mutant Of Mouse
Acetylcholinesterase
pdb|2XUH|A Chain A, Crystal Structure Of Mache-Y337a-Tz2pa6 Anti Complex (10
Mth)
pdb|2XUH|B Chain B, Crystal Structure Of Mache-Y337a-Tz2pa6 Anti Complex (10
Mth)
pdb|2XUI|A Chain A, Crystal Structure Of Mache-Y337a-Tz2pa6 Syn Complex (1 Wk)
pdb|2XUI|B Chain B, Crystal Structure Of Mache-Y337a-Tz2pa6 Syn Complex (1 Wk)
pdb|2XUJ|A Chain A, Crystal Structure Of Mache-Y337a-Tz2pa6 Syn Complex (1
Mth)
pdb|2XUJ|B Chain B, Crystal Structure Of Mache-Y337a-Tz2pa6 Syn Complex (1
Mth)
pdb|2XUK|A Chain A, Crystal Structure Of Mache-Y337a-Tz2pa6 Syn Complex (10
Mth)
pdb|2XUK|B Chain B, Crystal Structure Of Mache-Y337a-Tz2pa6 Syn Complex (10
Mth)
pdb|2XUO|A Chain A, Crystal Structure Of Mache-Y337a Mutant In Complex With
Soaked Tz2pa6 Anti Inhibitor
pdb|2XUO|B Chain B, Crystal Structure Of Mache-Y337a Mutant In Complex With
Soaked Tz2pa6 Anti Inhibitor
pdb|2XUP|A Chain A, Crystal Structure Of The Mache-Y337a Mutant In Complex
With Soaked Tz2pa6 Syn Inhibitor
pdb|2XUP|B Chain B, Crystal Structure Of The Mache-Y337a Mutant In Complex
With Soaked Tz2pa6 Syn Inhibitor
pdb|2XUQ|A Chain A, Crystal Structure Of The Mache-Y337a Mutant In Complex
With Soaked Tz2pa6 Anti-Syn Inhibitors
pdb|2XUQ|B Chain B, Crystal Structure Of The Mache-Y337a Mutant In Complex
With Soaked Tz2pa6 Anti-Syn Inhibitors
Length = 543
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 94/219 (42%), Gaps = 56/219 (25%)
Query: 195 FPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERD-IIVACIDYRNFPQGTIKDMV 253
+P+ + P PV+ +I GG + G + G+ L++ + ++ ++YR GT +
Sbjct: 105 YPRPAS-PTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYR---VGTFGFLA 160
Query: 254 KDASQ-------------GISFVCNNISEYGGDPDRIYLMGQSAGA-----HIAAC---T 292
S+ + +V NI+ +GGDP + L G+SAGA HI + +
Sbjct: 161 LPGSREAPGNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRS 220
Query: 293 LLEQAIKETG--EGESTTWSVSQIRAYFGL-----------SGGYNLF-----------D 328
L +A+ ++G G T S + R L +GG + D
Sbjct: 221 LFHRAVLQSGTPNGPWATVSAGEARRRATLLARLVGCPPGGAGGNDTELIACLRTRPAQD 280
Query: 329 LVDH-FH---SRGLYRSIFLSIMDGEESLRQYSPEVLVQ 363
LVDH +H ++R F+ ++DG+ +PE L+
Sbjct: 281 LVDHEWHVLPQESIFRFSFVPVVDGD--FLSDTPEALIN 317
>pdb|2XMB|A Chain A, G117h Mutant Of Human Butyrylcholinesterase In Complex
With Sulfate
pdb|2XMC|A Chain A, G117h Mutant Of Human Butyrylcholinesterase In Complex
With Fluoride Anion
pdb|2XMD|A Chain A, G117h Mutant Of Human Butyrylcholinesterase In Complex
With Echothiophate
pdb|2XMG|A Chain A, G117h Mutant Of Human Butyrylcholinesterase In Complex
With Vx
Length = 529
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 11/115 (9%)
Query: 191 LDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERD-IIVACIDYR------- 242
L+++ P V+ +I GG + G + G+ L+ + +IV ++YR
Sbjct: 95 LNVWIPAPKPKNATVLIWIYGGHFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFL 154
Query: 243 ---NFPQGTIKDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLL 294
P+ + D + +V NI+ +GG+P + L G+SAGA + LL
Sbjct: 155 ALPGNPEAPGNMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLL 209
>pdb|1C2O|A Chain A, Electrophorus Electricus Acetylcholinesterase
pdb|1C2O|B Chain B, Electrophorus Electricus Acetylcholinesterase
pdb|1C2O|C Chain C, Electrophorus Electricus Acetylcholinesterase
pdb|1C2O|D Chain D, Electrophorus Electricus Acetylcholinesterase
Length = 539
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 94/219 (42%), Gaps = 56/219 (25%)
Query: 195 FPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERD-IIVACIDYRNFPQGTIKDMV 253
+P+ + P PV+ +I GG + G + G+ L++ + ++ ++YR GT +
Sbjct: 101 YPRPAS-PTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYR---VGTFGFLA 156
Query: 254 KDASQ-------------GISFVCNNISEYGGDPDRIYLMGQSAGA-----HIAAC---T 292
S+ + +V NI+ +GGDP + L G+SAGA HI + +
Sbjct: 157 LPGSREAPGNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRS 216
Query: 293 LLEQAIKETG--EGESTTWSVSQIRAYFGL-----------SGGYNLF-----------D 328
L +A+ ++G G T S + R L +GG + D
Sbjct: 217 LFHRAVLQSGTPNGPWATVSAGEARRRATLLARLVGCPPGGAGGNDTELIACLRTRPAQD 276
Query: 329 LVDH-FH---SRGLYRSIFLSIMDGEESLRQYSPEVLVQ 363
LVDH +H ++R F+ ++DG+ +PE L+
Sbjct: 277 LVDHEWHVLPQESIFRFSFVPVVDGD--FLSDTPEALIN 313
>pdb|2C0P|A Chain A, Aged Form Of Mouse Acetylcholinesterase Inhibited By Tabun
pdb|2C0P|B Chain B, Aged Form Of Mouse Acetylcholinesterase Inhibited By Tabun
pdb|2C0Q|A Chain A, Non-Aged Form Of Mouse Acetylcholinesterase Inhibited By
Tabun
pdb|2C0Q|B Chain B, Non-Aged Form Of Mouse Acetylcholinesterase Inhibited By
Tabun
pdb|2JEY|A Chain A, Mus Musculus Acetylcholinesterase In Complex With Hlo-7
pdb|2JEY|B Chain B, Mus Musculus Acetylcholinesterase In Complex With Hlo-7
pdb|2WHR|A Chain A, Crystal Structure Of Acetylcholinesterase In Complex With
K027
pdb|2WHR|B Chain B, Crystal Structure Of Acetylcholinesterase In Complex With
K027
pdb|4A23|A Chain A, Mus Musculus Acetylcholinesterase In Complex With Racemic
C5685
pdb|4A23|B Chain B, Mus Musculus Acetylcholinesterase In Complex With Racemic
C5685
pdb|4ARA|A Chain A, Mus Musculus Acetylcholinesterase In Complex With
(r)-c5685 At 2.5 A Resolution.
pdb|4ARA|B Chain B, Mus Musculus Acetylcholinesterase In Complex With
(r)-c5685 At 2.5 A Resolution.
pdb|4ARB|A Chain A, Mus Musculus Acetylcholinesterase In Complex With
(s)-c5685 At 2.25 A Resolution.
pdb|4ARB|B Chain B, Mus Musculus Acetylcholinesterase In Complex With
(s)-c5685 At 2.25 A Resolution
Length = 548
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 94/219 (42%), Gaps = 56/219 (25%)
Query: 195 FPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERD-IIVACIDYRNFPQGTIKDMV 253
+P+ + P PV+ +I GG + G + G+ L++ + ++ ++YR GT +
Sbjct: 105 YPRPAS-PTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYR---VGTFGFLA 160
Query: 254 KDASQ-------------GISFVCNNISEYGGDPDRIYLMGQSAGA-----HIAAC---T 292
S+ + +V NI+ +GGDP + L G+SAGA HI + +
Sbjct: 161 LPGSREAPGNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRS 220
Query: 293 LLEQAIKETG--EGESTTWSVSQIRAYFGL-----------SGGYNLF-----------D 328
L +A+ ++G G T S + R L +GG + D
Sbjct: 221 LFHRAVLQSGTPNGPWATVSAGEARRRATLLARLVGCPPGGAGGNDTELIACLRTRPAQD 280
Query: 329 LVDH-FH---SRGLYRSIFLSIMDGEESLRQYSPEVLVQ 363
LVDH +H ++R F+ ++DG+ +PE L+
Sbjct: 281 LVDHEWHVLPQESIFRFSFVPVVDGD--FLSDTPEALIN 317
>pdb|1MAH|A Chain A, Fasciculin2-Mouse Acetylcholinesterase Complex
pdb|1J06|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase In The Apo
Form
pdb|1J06|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase In The Apo
Form
pdb|1J07|A Chain A, Crystal Structure Of The Mouse
Acetylcholinesterase-Decidium Complex
pdb|1J07|B Chain B, Crystal Structure Of The Mouse
Acetylcholinesterase-Decidium Complex
pdb|1N5R|A Chain A, Crystal Structure Of The Mouse
Acetylcholinesterase-Propidium Complex
pdb|1N5R|B Chain B, Crystal Structure Of The Mouse
Acetylcholinesterase-Propidium Complex
pdb|2H9Y|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With M-(N,N, N-Trimethylammonio)trifluoroacetophenone
pdb|2H9Y|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With M-(N,N, N-Trimethylammonio)trifluoroacetophenone
pdb|2HA0|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With 4- Ketoamyltrimethylammonium
pdb|2HA0|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With 4- Ketoamyltrimethylammonium
pdb|2HA2|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With Succinylcholine
pdb|2HA2|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With Succinylcholine
pdb|2HA3|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With Choline
pdb|2HA3|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With Choline
pdb|2GYU|A Chain A, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Hi-6
pdb|2GYU|B Chain B, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Hi-6
pdb|2GYV|A Chain A, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Ortho-7
pdb|2GYV|B Chain B, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Ortho-7
pdb|2GYW|A Chain A, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Obidoxime
pdb|2GYW|B Chain B, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Obidoxime
pdb|2WLS|A Chain A, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Amts13
pdb|2WLS|B Chain B, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Amts13
pdb|4BC0|A Chain A, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 12-h Soak): Cresyl-phosphoserine Adduct
pdb|4BC0|B Chain B, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 12-h Soak): Cresyl-phosphoserine Adduct
pdb|4BC0|C Chain C, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 12-h Soak): Cresyl-phosphoserine Adduct
pdb|4BC0|D Chain D, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 12-h Soak): Cresyl-phosphoserine Adduct
pdb|4BC1|A Chain A, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 30-min Soak): Cresyl-saligenin-phosphoserine Adduct
pdb|4BC1|B Chain B, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 30-min Soak): Cresyl-saligenin-phosphoserine Adduct
pdb|4BC1|C Chain C, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 30-min Soak): Cresyl-saligenin-phosphoserine Adduct
pdb|4BC1|D Chain D, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 30-min Soak): Cresyl-saligenin-phosphoserine Adduct
Length = 543
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 94/219 (42%), Gaps = 56/219 (25%)
Query: 195 FPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERD-IIVACIDYRNFPQGTIKDMV 253
+P+ + P PV+ +I GG + G + G+ L++ + ++ ++YR GT +
Sbjct: 105 YPRPAS-PTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYR---VGTFGFLA 160
Query: 254 KDASQ-------------GISFVCNNISEYGGDPDRIYLMGQSAGA-----HIAAC---T 292
S+ + +V NI+ +GGDP + L G+SAGA HI + +
Sbjct: 161 LPGSREAPGNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRS 220
Query: 293 LLEQAIKETG--EGESTTWSVSQIRAYFGL-----------SGGYNLF-----------D 328
L +A+ ++G G T S + R L +GG + D
Sbjct: 221 LFHRAVLQSGTPNGPWATVSAGEARRRATLLARLVGCPPGGAGGNDTELIACLRTRPAQD 280
Query: 329 LVDH-FH---SRGLYRSIFLSIMDGEESLRQYSPEVLVQ 363
LVDH +H ++R F+ ++DG+ +PE L+
Sbjct: 281 LVDHEWHVLPQESIFRFSFVPVVDGD--FLSDTPEALIN 317
>pdb|1N5M|A Chain A, Crystal Structure Of The Mouse
Acetylcholinesterase-Gallamine Complex
pdb|1N5M|B Chain B, Crystal Structure Of The Mouse
Acetylcholinesterase-Gallamine Complex
Length = 541
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 94/219 (42%), Gaps = 56/219 (25%)
Query: 195 FPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERD-IIVACIDYRNFPQGTIKDMV 253
+P+ + P PV+ +I GG + G + G+ L++ + ++ ++YR GT +
Sbjct: 105 YPRPAS-PTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYR---VGTFGFLA 160
Query: 254 KDASQ-------------GISFVCNNISEYGGDPDRIYLMGQSAGA-----HIAAC---T 292
S+ + +V NI+ +GGDP + L G+SAGA HI + +
Sbjct: 161 LPGSREAPGNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRS 220
Query: 293 LLEQAIKETG--EGESTTWSVSQIRAYFGL-----------SGGYNLF-----------D 328
L +A+ ++G G T S + R L +GG + D
Sbjct: 221 LFHRAVLQSGTPNGPWATVSAGEARRRATLLARLVGCPPGGAGGNDTELIACLRTRPAQD 280
Query: 329 LVDH-FH---SRGLYRSIFLSIMDGEESLRQYSPEVLVQ 363
LVDH +H ++R F+ ++DG+ +PE L+
Sbjct: 281 LVDHEWHVLPQESIFRFSFVPVVDGD--FLSDTPEALIN 317
>pdb|2XUF|A Chain A, Crystal Structure Of Mache-Y337a-Tz2pa6 Anti Complex (1
Mth)
pdb|2XUF|B Chain B, Crystal Structure Of Mache-Y337a-Tz2pa6 Anti Complex (1
Mth)
pdb|2XUG|A Chain A, Crystal Structure Of Mache-Y337a-Tz2pa6 Anti Complex (1
Wk)
pdb|2XUG|B Chain B, Crystal Structure Of Mache-Y337a-Tz2pa6 Anti Complex (1
Wk)
Length = 544
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 94/219 (42%), Gaps = 56/219 (25%)
Query: 195 FPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERD-IIVACIDYRNFPQGTIKDMV 253
+P+ + P PV+ +I GG + G + G+ L++ + ++ ++YR GT +
Sbjct: 105 YPRPAS-PTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYR---VGTFGFLA 160
Query: 254 KDASQ-------------GISFVCNNISEYGGDPDRIYLMGQSAGA-----HIAAC---T 292
S+ + +V NI+ +GGDP + L G+SAGA HI + +
Sbjct: 161 LPGSREAPGNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRS 220
Query: 293 LLEQAIKETG--EGESTTWSVSQIRAYFGL-----------SGGYNLF-----------D 328
L +A+ ++G G T S + R L +GG + D
Sbjct: 221 LFHRAVLQSGTPNGPWATVSAGEARRRATLLARLVGCPPGGAGGNDTELIACLRTRPAQD 280
Query: 329 LVDH-FH---SRGLYRSIFLSIMDGEESLRQYSPEVLVQ 363
LVDH +H ++R F+ ++DG+ +PE L+
Sbjct: 281 LVDHEWHVLPQESIFRFSFVPVVDGD--FLSDTPEALIN 317
>pdb|1MAA|A Chain A, Mouse Acetylcholinesterase Catalytic Domain, Glycosylated
Protein
pdb|1MAA|B Chain B, Mouse Acetylcholinesterase Catalytic Domain, Glycosylated
Protein
pdb|1MAA|C Chain C, Mouse Acetylcholinesterase Catalytic Domain, Glycosylated
Protein
pdb|1MAA|D Chain D, Mouse Acetylcholinesterase Catalytic Domain, Glycosylated
Protein
Length = 547
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 94/219 (42%), Gaps = 56/219 (25%)
Query: 195 FPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERD-IIVACIDYRNFPQGTIKDMV 253
+P+ + P PV+ +I GG + G + G+ L++ + ++ ++YR GT +
Sbjct: 105 YPRPAS-PTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYR---VGTFGFLA 160
Query: 254 KDASQ-------------GISFVCNNISEYGGDPDRIYLMGQSAGA-----HIAAC---T 292
S+ + +V NI+ +GGDP + L G+SAGA HI + +
Sbjct: 161 LPGSREAPGNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRS 220
Query: 293 LLEQAIKETG--EGESTTWSVSQIRAYFGL-----------SGGYNLF-----------D 328
L +A+ ++G G T S + R L +GG + D
Sbjct: 221 LFHRAVLQSGTPNGPWATVSAGEARRRATLLARLVGCPPGGAGGNDTELIACLRTRPAQD 280
Query: 329 LVDH-FH---SRGLYRSIFLSIMDGEESLRQYSPEVLVQ 363
LVDH +H ++R F+ ++DG+ +PE L+
Sbjct: 281 LVDHEWHVLPQESIFRFSFVPVVDGD--FLSDTPEALIN 317
>pdb|1KU6|A Chain A, Fasciculin 2-Mouse Acetylcholinesterase Complex
Length = 549
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 94/219 (42%), Gaps = 56/219 (25%)
Query: 195 FPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERD-IIVACIDYRNFPQGTIKDMV 253
+P+ + P PV+ +I GG + G + G+ L++ + ++ ++YR GT +
Sbjct: 105 YPRPAS-PTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYR---VGTFGFLA 160
Query: 254 KDASQ-------------GISFVCNNISEYGGDPDRIYLMGQSAGA-----HIAAC---T 292
S+ + +V NI+ +GGDP + L G+SAGA HI + +
Sbjct: 161 LPGSREAPGNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRS 220
Query: 293 LLEQAIKETG--EGESTTWSVSQIRAYFGL-----------SGGYNLF-----------D 328
L +A+ ++G G T S + R L +GG + D
Sbjct: 221 LFHRAVLQSGTPNGPWATVSAGEARRRATLLARLVGCPPGGAGGNDTELIACLRTRPAQD 280
Query: 329 LVDH-FH---SRGLYRSIFLSIMDGEESLRQYSPEVLVQ 363
LVDH +H ++R F+ ++DG+ +PE L+
Sbjct: 281 LVDHEWHVLPQESIFRFSFVPVVDGD--FLSDTPEALIN 317
>pdb|1GZ7|A Chain A, Crystal Structure Of The Closed State Of Lipase 2 From
Candida Rugosa
pdb|1GZ7|B Chain B, Crystal Structure Of The Closed State Of Lipase 2 From
Candida Rugosa
pdb|1GZ7|C Chain C, Crystal Structure Of The Closed State Of Lipase 2 From
Candida Rugosa
pdb|1GZ7|D Chain D, Crystal Structure Of The Closed State Of Lipase 2 From
Candida Rugosa
Length = 534
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 82/200 (41%), Gaps = 34/200 (17%)
Query: 204 PVVAFITGGAWIIGYKAWGSLL--GQQLSERDIIVA------CIDYRNFP---------- 245
PV+ +I GG G++ GS L G Q+ + +++ ++YR
Sbjct: 115 PVMLWIFGG----GFELGGSSLFPGDQMVAKSVLMGKPVIHVSMNYRVASWGFLAGPDIQ 170
Query: 246 -QGTIKDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETGEG 304
+G+ + D + +V +NI+ +GGDP ++ + G+SAG+ L+ +G
Sbjct: 171 NEGSGNAGLHDQRLAMQWVADNIAGFGGDPSKVTIYGESAGSMSTFVHLVWN------DG 224
Query: 305 ESTTWSVSQIRAYFGLSGGYNLFDLVDHFHSRGLYRSIFLSIMDGEES-----LRQYSPE 359
++T RA SG D VD + +Y + S G S LR S +
Sbjct: 225 DNTYNGKPLFRAAIMQSGCMVPSDPVDGTYGTEIYNQVVASAGCGSASDKLACLRGLSQD 284
Query: 360 VLVQDPNTRHAVSLLPPIIL 379
L Q + V P + L
Sbjct: 285 TLYQATSDTPGVLAYPSLRL 304
>pdb|4B0O|A Chain A, Crystal Structure Of Soman-Aged Human
Butyrylcholinesterase In Complex With Benzyl
Pyridinium-4-Methyltrichloroacetimidate
pdb|4B0P|A Chain A, Crystal Structure Of Soman-Aged Human
Butyrylcholinesterase In Complex With Methyl
2-(Pentafluorobenzyloxyimino) Pyridinium
Length = 529
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 51/115 (44%), Gaps = 11/115 (9%)
Query: 191 LDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERD-IIVACIDYR------- 242
L+++ P V+ +I GG + G + G+ L+ + +IV ++YR
Sbjct: 95 LNVWIPAPKPKNATVLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFL 154
Query: 243 ---NFPQGTIKDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLL 294
P+ + D + +V NI+ +GG+P + L G+ AGA + LL
Sbjct: 155 ALPGNPEAPGNMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGEXAGAASVSLHLL 209
>pdb|3DJY|A Chain A, Nonaged Form Of Human Butyrylcholinesterase Inhibited By
Tabun
pdb|3DKK|A Chain A, Aged Form Of Human Butyrylcholinesterase Inhibited By
Tabun
Length = 529
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 51/115 (44%), Gaps = 11/115 (9%)
Query: 191 LDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERD-IIVACIDYR------- 242
L+++ P V+ +I GG + G + G+ L+ + +IV ++YR
Sbjct: 95 LNVWIPAPKPKNATVLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFL 154
Query: 243 ---NFPQGTIKDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLL 294
P+ + D + +V NI+ +GG+P + L G+ AGA + LL
Sbjct: 155 ALPGNPEAPGNMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGEXAGAASVSLHLL 209
>pdb|4AXB|A Chain A, Crystal Structure Of Soman-aged Human
Butyrylcholinesterase In Complex With 2-pam
Length = 527
Score = 36.6 bits (83), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 51/115 (44%), Gaps = 11/115 (9%)
Query: 191 LDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERD-IIVACIDYR------- 242
L+++ P V+ +I GG + G + G+ L+ + +IV ++YR
Sbjct: 93 LNVWIPAPKPKNATVLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFL 152
Query: 243 ---NFPQGTIKDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLL 294
P+ + D + +V NI+ +GG+P + L G+ AGA + LL
Sbjct: 153 ALPGNPEAPGNMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGEXAGAASVSLHLL 207
>pdb|2Y1K|A Chain A, Structure Of Human Butyrylcholinesterase Inhibited By Cbdp
( 12h Soak): Phosphoserine Adduct
Length = 529
Score = 36.6 bits (83), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 51/115 (44%), Gaps = 11/115 (9%)
Query: 191 LDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERD-IIVACIDYR------- 242
L+++ P V+ +I GG + G + G+ L+ + +IV ++YR
Sbjct: 95 LNVWIPAPKPKNATVLIWIYGGGFQTGTSSLHVYDGKFLARVERVIVVSMNYRVGALGFL 154
Query: 243 ---NFPQGTIKDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLL 294
P+ + D + +V NI+ +GG+P + L G+ AGA + LL
Sbjct: 155 ALPGNPEAPGNMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGEXAGAASVSLHLL 209
>pdb|2HA4|A Chain A, Crystal Structure Of Mutant S203a Of Mouse
Acetylcholinesterase Complexed With Acetylcholine
pdb|2HA4|B Chain B, Crystal Structure Of Mutant S203a Of Mouse
Acetylcholinesterase Complexed With Acetylcholine
pdb|2HA5|A Chain A, Crystal Structure Of Mutant S203a Of Acetylcholinesterase
Complexed With Acetylthiocholine
pdb|2HA5|B Chain B, Crystal Structure Of Mutant S203a Of Acetylcholinesterase
Complexed With Acetylthiocholine
pdb|2HA6|A Chain A, Crystal Structure Of Mutant S203a Of Mouse
Acetylcholinesterase Complexed With Succinylcholine
pdb|2HA6|B Chain B, Crystal Structure Of Mutant S203a Of Mouse
Acetylcholinesterase Complexed With Succinylcholine
pdb|2HA7|A Chain A, Crystal Structure Of Mutant S203a Of Mouse
Acetylcholinesterase Complexed With Butyrylthiocholine
pdb|2HA7|B Chain B, Crystal Structure Of Mutant S203a Of Mouse
Acetylcholinesterase Complexed With Butyrylthiocholine
Length = 543
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 94/219 (42%), Gaps = 56/219 (25%)
Query: 195 FPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERD-IIVACIDYRNFPQGTIKDMV 253
+P+ + P PV+ +I GG + G + G+ L++ + ++ ++YR GT +
Sbjct: 105 YPRPAS-PTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYR---VGTFGFLA 160
Query: 254 KDASQ-------------GISFVCNNISEYGGDPDRIYLMGQSAGA-----HIAAC---T 292
S+ + +V NI+ +GGDP + L G++AGA HI + +
Sbjct: 161 LPGSREAPGNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGEAAGAASVGMHILSLPSRS 220
Query: 293 LLEQAIKETG--EGESTTWSVSQIRAYFGL-----------SGGYNLF-----------D 328
L +A+ ++G G T S + R L +GG + D
Sbjct: 221 LFHRAVLQSGTPNGPWATVSAGEARRRATLLARLVGCPPGGAGGNDTELIACLRTRPAQD 280
Query: 329 LVDH-FH---SRGLYRSIFLSIMDGEESLRQYSPEVLVQ 363
LVDH +H ++R F+ ++DG+ +PE L+
Sbjct: 281 LVDHEWHVLPQESIFRFSFVPVVDGD--FLSDTPEALIN 317
>pdb|1MX1|A Chain A, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX1|B Chain B, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX1|C Chain C, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX1|D Chain D, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX1|E Chain E, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX1|F Chain F, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX5|A Chain A, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX5|B Chain B, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX5|C Chain C, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX5|D Chain D, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX5|E Chain E, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX5|F Chain F, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX9|A Chain A, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|B Chain B, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|C Chain C, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|D Chain D, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|E Chain E, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|F Chain F, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|G Chain G, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|H Chain H, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|I Chain I, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|J Chain J, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|K Chain K, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|L Chain L, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
Length = 548
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 53/119 (44%), Gaps = 24/119 (20%)
Query: 204 PVVAFITGGAWIIGYKAWGSLLGQQLS-ERDIIVACIDYR-----------NFPQGTIKD 251
PV+ +I GG ++G A + G L+ +++V I YR +G
Sbjct: 116 PVMVWIHGGGLMVG--AASTYDGLALAAHENVVVVTIQYRLGIWGFFSTGDEHSRGNWGH 173
Query: 252 MVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIA--------ACTLLEQAIKETG 302
+ D + +V +NI+ +GG+P + + G+SAG A L +AI E+G
Sbjct: 174 L--DQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESG 230
>pdb|2DQY|A Chain A, Crystal Structure Of Human Carboxylesterase In Complex
With Cholate And Palmitate
pdb|2DQY|B Chain B, Crystal Structure Of Human Carboxylesterase In Complex
With Cholate And Palmitate
pdb|2DQY|C Chain C, Crystal Structure Of Human Carboxylesterase In Complex
With Cholate And Palmitate
pdb|2DQZ|A Chain A, Crystal Structure Of Human Carboxylesterase In Complex
With Homatropine, Coenzyme A, And Palmitate
pdb|2DQZ|B Chain B, Crystal Structure Of Human Carboxylesterase In Complex
With Homatropine, Coenzyme A, And Palmitate
pdb|2DQZ|C Chain C, Crystal Structure Of Human Carboxylesterase In Complex
With Homatropine, Coenzyme A, And Palmitate
pdb|2DR0|A Chain A, Crystal Structure Of Human Carboxylesterase In Complex
With Taurocholate
pdb|2DR0|B Chain B, Crystal Structure Of Human Carboxylesterase In Complex
With Taurocholate
pdb|2DR0|C Chain C, Crystal Structure Of Human Carboxylesterase In Complex
With Taurocholate
pdb|2H7C|A Chain A, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
pdb|2H7C|B Chain B, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
pdb|2H7C|C Chain C, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
pdb|2H7C|D Chain D, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
pdb|2H7C|E Chain E, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
pdb|2H7C|F Chain F, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
Length = 542
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 53/119 (44%), Gaps = 24/119 (20%)
Query: 204 PVVAFITGGAWIIGYKAWGSLLGQQLS-ERDIIVACIDYR-----------NFPQGTIKD 251
PV+ +I GG ++G A + G L+ +++V I YR +G
Sbjct: 116 PVMVWIHGGGLMVG--AASTYDGLALAAHENVVVVTIQYRLGIWGFFSTGDEHSRGNWGH 173
Query: 252 MVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIA--------ACTLLEQAIKETG 302
+ D + +V +NI+ +GG+P + + G+SAG A L +AI E+G
Sbjct: 174 L--DQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESG 230
>pdb|2X8B|A Chain A, Crystal Structure Of Human Acetylcholinesterase Inhibited
By Aged Tabun And Complexed With Fasciculin-Ii
Length = 583
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 14/112 (12%)
Query: 195 FPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQL--SERDIIVACIDYRNFPQGTI--- 249
+P+ + P PV+ +I GG + G + G+ L +ER ++V+ ++YR G +
Sbjct: 105 YPRPTS-PTPVLVWIYGGGFYSGASSLDVYDGRFLVQAERTVLVS-MNYRVGAFGFLALP 162
Query: 250 -------KDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLL 294
+ D + +V N++ +GGDP + L G+ AGA LL
Sbjct: 163 GSREAPGNVGLLDQRLALQWVQENVAAFGGDPTSVTLFGEXAGAASVGMHLL 214
>pdb|3K9B|A Chain A, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Cyclosarin (Gf)
pdb|3K9B|B Chain B, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Cyclosarin (Gf)
pdb|3K9B|C Chain C, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Cyclosarin (Gf)
Length = 529
Score = 36.2 bits (82), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 59/134 (44%), Gaps = 26/134 (19%)
Query: 191 LDLYFPK--SSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLS-ERDIIVACIDYR----- 242
L++Y P + PV+ +I GG ++G A + G L+ +++V I YR
Sbjct: 96 LNIYTPADLTKKNRLPVMVWIHGGGLMVG--AASTYDGLALAAHENVVVVTIQYRLGIWG 153
Query: 243 ------NFPQGTIKDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIA------- 289
+G + D + +V +NI+ +GG+P + + G+SAG
Sbjct: 154 FFSTGDEHSRGNWGHL--DQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSP 211
Query: 290 -ACTLLEQAIKETG 302
A L +AI E+G
Sbjct: 212 LAKNLFHRAISESG 225
>pdb|1YA4|A Chain A, Crystal Structure Of Human Liver Carboxylesterase 1 In
Complex With Tamoxifen
pdb|1YA4|B Chain B, Crystal Structure Of Human Liver Carboxylesterase 1 In
Complex With Tamoxifen
pdb|1YA4|C Chain C, Crystal Structure Of Human Liver Carboxylesterase 1 In
Complex With Tamoxifen
pdb|1YA8|A Chain A, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Cleavage Products Of Mevastatin
pdb|1YA8|B Chain B, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Cleavage Products Of Mevastatin
pdb|1YA8|C Chain C, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Cleavage Products Of Mevastatin
pdb|1YAH|A Chain A, Crystal Structure Of Human Liver Carboxylesterase
Complexed To Etyl Acetate; A Fatty Acid Ethyl Ester
Analogue
pdb|1YAH|B Chain B, Crystal Structure Of Human Liver Carboxylesterase
Complexed To Etyl Acetate; A Fatty Acid Ethyl Ester
Analogue
pdb|1YAH|C Chain C, Crystal Structure Of Human Liver Carboxylesterase
Complexed To Etyl Acetate; A Fatty Acid Ethyl Ester
Analogue
pdb|1YAJ|A Chain A, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|B Chain B, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|C Chain C, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|D Chain D, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|E Chain E, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|F Chain F, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|G Chain G, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|H Chain H, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|I Chain I, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|J Chain J, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|K Chain K, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|L Chain L, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|2HRQ|A Chain A, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRQ|B Chain B, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRQ|C Chain C, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRQ|D Chain D, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRQ|E Chain E, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRQ|F Chain F, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRR|A Chain A, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Tabun (Ga)
pdb|2HRR|B Chain B, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Tabun (Ga)
pdb|2HRR|C Chain C, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Tabun (Ga)
pdb|4AB1|A Chain A, Recombinant Human Carboxylesterase 1 From Whole Cabbage
Loopers
Length = 532
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 59/134 (44%), Gaps = 26/134 (19%)
Query: 191 LDLYFPK--SSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLS-ERDIIVACIDYR----- 242
L++Y P + PV+ +I GG ++G A + G L+ +++V I YR
Sbjct: 99 LNIYTPADLTKKNRLPVMVWIHGGGLMVG--AASTYDGLALAAHENVVVVTIQYRLGIWG 156
Query: 243 ------NFPQGTIKDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIA------- 289
+G + D + +V +NI+ +GG+P + + G+SAG
Sbjct: 157 FFSTGDEHSRGNWGHL--DQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSP 214
Query: 290 -ACTLLEQAIKETG 302
A L +AI E+G
Sbjct: 215 LAKNLFHRAISESG 228
>pdb|2JGF|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Non-Aged Fenamiphos
pdb|2JGF|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Non-Aged Fenamiphos
pdb|2JGI|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Non-Aged Diisopropyl Fluorophosphate (Dfp)
pdb|2JGI|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Non-Aged Diisopropyl Fluorophosphate (Dfp)
pdb|2JGK|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Aged Fenamiphos
pdb|2JGK|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Aged Fenamiphos
pdb|2JGL|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Aged Vx And Sarin
pdb|2JGL|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Aged Vx And Sarin
pdb|2JGM|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Aged Diisopropyl Fluorophosphate (Dfp)
pdb|2JGM|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Aged Diisopropyl Fluorophosphate (Dfp)
pdb|2JEZ|A Chain A, Mus Musculus Acetylcholinesterase In Complex With Tabun
And Hlo-7
pdb|2JEZ|B Chain B, Mus Musculus Acetylcholinesterase In Complex With Tabun
And Hlo-7
pdb|2JF0|A Chain A, Mus Musculus Acetylcholinesterase In Complex With Tabun
And Ortho-7
pdb|2JF0|B Chain B, Mus Musculus Acetylcholinesterase In Complex With Tabun
And Ortho-7
pdb|3DL4|A Chain A, Non-Aged Form Of Mouse Acetylcholinesterase Inhibited By
Tabun- Update
pdb|3DL4|B Chain B, Non-Aged Form Of Mouse Acetylcholinesterase Inhibited By
Tabun- Update
pdb|2WHP|A Chain A, Crystal Structure Of Acetylcholinesterase, Phosphonylated
By Sarin And In Complex With Hi-6
pdb|2WHQ|A Chain A, Crystal Structure Of Acetylcholinesterase, Phosphonylated
By Sarin (Aged) In Complex With Hi-6
pdb|2WHQ|B Chain B, Crystal Structure Of Acetylcholinesterase, Phosphonylated
By Sarin (Aged) In Complex With Hi-6
pdb|2WU3|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase In Complex
With Fenamiphos And Hi-6
pdb|2WU3|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase In Complex
With Fenamiphos And Hi-6
pdb|2WU4|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase In Complex
With Fenamiphos And Ortho-7
pdb|2WU4|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase In Complex
With Fenamiphos And Ortho-7
pdb|2Y2U|A Chain A, Nonaged Form Of Mouse Acetylcholinesterase Inhibited By
Vx-Update
pdb|2Y2U|B Chain B, Nonaged Form Of Mouse Acetylcholinesterase Inhibited By
Vx-Update
pdb|2Y2V|A Chain A, Nonaged Form Of Mouse Acetylcholinesterase Inhibited By
Sarin-Update
pdb|2Y2V|B Chain B, Nonaged Form Of Mouse Acetylcholinesterase Inhibited By
Sarin-Update
Length = 548
Score = 35.8 bits (81), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 56/219 (25%)
Query: 195 FPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERD-IIVACIDYRNFPQGTIKDMV 253
+P+ + P PV+ +I GG + G + G+ L++ + ++ ++YR GT +
Sbjct: 105 YPRPAS-PTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYR---VGTFGFLA 160
Query: 254 KDASQ-------------GISFVCNNISEYGGDPDRIYLMGQSAGA-----HIAAC---T 292
S+ + +V NI+ +GGDP + L G+ AGA HI + +
Sbjct: 161 LPGSREAPGNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGEXAGAASVGMHILSLPSRS 220
Query: 293 LLEQAIKETG--EGESTTWSVSQIRAYFGL-----------SGGYNLF-----------D 328
L +A+ ++G G T S + R L +GG + D
Sbjct: 221 LFHRAVLQSGTPNGPWATVSAGEARRRATLLARLVGCPPGGAGGNDTELIACLRTRPAQD 280
Query: 329 LVDH-FH---SRGLYRSIFLSIMDGEESLRQYSPEVLVQ 363
LVDH +H ++R F+ ++DG+ +PE L+
Sbjct: 281 LVDHEWHVLPQESIFRFSFVPVVDGD--FLSDTPEALIN 317
>pdb|2WHP|B Chain B, Crystal Structure Of Acetylcholinesterase, Phosphonylated
By Sarin And In Complex With Hi-6
Length = 548
Score = 35.8 bits (81), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 56/219 (25%)
Query: 195 FPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERD-IIVACIDYRNFPQGTIKDMV 253
+P+ + P PV+ +I GG + G + G+ L++ + ++ ++YR GT +
Sbjct: 105 YPRPAS-PTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYR---VGTFGFLA 160
Query: 254 KDASQ-------------GISFVCNNISEYGGDPDRIYLMGQSAGA-----HIAAC---T 292
S+ + +V NI+ +GGDP + L G+ AGA HI + +
Sbjct: 161 LPGSREAPGNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGEXAGAASVGMHILSLPSRS 220
Query: 293 LLEQAIKETG--EGESTTWSVSQIRAYFGL-----------SGGYNLF-----------D 328
L +A+ ++G G T S + R L +GG + D
Sbjct: 221 LFHRAVLQSGTPNGPWATVSAGEARRRATLLARLVGCPPGGAGGNDTELIACLRTRPAQD 280
Query: 329 LVDH-FH---SRGLYRSIFLSIMDGEESLRQYSPEVLVQ 363
LVDH +H ++R F+ ++DG+ +PE L+
Sbjct: 281 LVDHEWHVLPQESIFRFSFVPVVDGD--FLSDTPEALIN 317
>pdb|2PPL|A Chain A, Human Pancreatic Lipase-Related Protein 1
Length = 485
Score = 35.4 bits (80), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 208 FITGGAWIIGYKAWGSLLGQQLSE-RDIIVACIDYRNFPQGTIKDMVKD----ASQGISF 262
FI G G ++W + + ++L E ++ C+D++ Q T + +Q
Sbjct: 99 FIIHGFIDKGDESWVTDMCKKLFEVEEVNCICVDWKKGSQATYTQAANNVRVVGAQVAQM 158
Query: 263 VCNNISEYGGDPDRIYLMGQSAGAHIAA 290
+ ++EY P +++L+G S GAH+A
Sbjct: 159 LDILLTEYSYPPSKVHLIGHSLGAHVAG 186
>pdb|1UKC|A Chain A, Crystal Structure Of Aspergillus Niger Esta
pdb|1UKC|B Chain B, Crystal Structure Of Aspergillus Niger Esta
Length = 522
Score = 35.0 bits (79), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 46/111 (41%), Gaps = 12/111 (10%)
Query: 204 PVVAFITGGAWIIGYKA-WGSLLGQQLSERDIIVACIDYR----NF-------PQGTIKD 251
PV FI GG + A + Q S+ I+ +YR F G +
Sbjct: 103 PVWLFIQGGGYAENSNANYNGTQVIQASDDVIVFVTFNYRVGALGFLASEKVRQNGDLNA 162
Query: 252 MVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETG 302
+ D + + +V I ++GGDPD I + G SAGA A L K+ G
Sbjct: 163 GLLDQRKALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEG 213
>pdb|3DL7|A Chain A, Aged Form Of Mouse Acetylcholinesterase Inhibited By
Tabun- Update
Length = 538
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 89/214 (41%), Gaps = 51/214 (23%)
Query: 195 FPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERD-IIVACIDYRNFPQGTIKDMV 253
+P+ + P PV+ +I GG + G + G+ L++ + ++ ++YR GT +
Sbjct: 105 YPRPAS-PTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYR---VGTFGFLA 160
Query: 254 KDASQ-------------GISFVCNNISEYGGDPDRIYLMGQ------SAGAHIAAC--- 291
S+ + +V NI+ +GGDP + L G+ S G HI +
Sbjct: 161 LPGSREAPGNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGEXXAGAASVGMHILSLPSR 220
Query: 292 TLLEQAIKETG--EGESTTWSVSQIR-------AYFGLSGGYNLF---------DLVDH- 332
+L +A+ ++G G T S + R G L DLVDH
Sbjct: 221 SLFHRAVLQSGTPNGPWATVSAGEARRRATLLARLVGCPNDTELIACLRTRPAQDLVDHE 280
Query: 333 FH---SRGLYRSIFLSIMDGEESLRQYSPEVLVQ 363
+H ++R F+ ++DG+ +PE L+
Sbjct: 281 WHVLPQESIFRFSFVPVVDGD--FLSDTPEALIN 312
>pdb|2JGJ|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Aged Methamidophos
Length = 535
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 90/213 (42%), Gaps = 50/213 (23%)
Query: 195 FPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERD-IIVACIDYRNFPQGTIKDMV 253
+P+ + P PV+ +I GG + G + G+ L++ + ++ ++YR GT +
Sbjct: 102 YPRPAS-PTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYR---VGTFGFLA 157
Query: 254 KDASQ-------------GISFVCNNISEYGGDPDRIYLMGQ------SAGAHIAAC--- 291
S+ + +V NI+ +GGDP + L G+ S G HI +
Sbjct: 158 LPGSREAPGNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGEXXAGAASVGMHILSLPSR 217
Query: 292 TLLEQAIKETG--EGESTTWSVSQIRAYFGLSG---GYN------------LFDLVDH-F 333
+L +A+ ++G G T S + R L G N DLVDH +
Sbjct: 218 SLFHRAVLQSGTPNGPWATVSAGEARRRATLLARLVGCNDTELIACLRTRPAQDLVDHEW 277
Query: 334 H---SRGLYRSIFLSIMDGEESLRQYSPEVLVQ 363
H ++R F+ ++DG+ +PE L+
Sbjct: 278 HVLPQESIFRFSFVPVVDGD--FLSDTPEALIN 308
>pdb|2JGE|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Non-Aged Methamidophos
Length = 533
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 90/213 (42%), Gaps = 50/213 (23%)
Query: 195 FPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERD-IIVACIDYRNFPQGTIKDMV 253
+P+ + P PV+ +I GG + G + G+ L++ + ++ ++YR GT +
Sbjct: 102 YPRPAS-PTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYR---VGTFGFLA 157
Query: 254 KDASQ-------------GISFVCNNISEYGGDPDRIYLMGQ------SAGAHIAAC--- 291
S+ + +V NI+ +GGDP + L G+ S G HI +
Sbjct: 158 LPGSREAPGNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGEXXAGAASVGMHILSLPSR 217
Query: 292 TLLEQAIKETG--EGESTTWSVSQIRAYFGLSG---GYN------------LFDLVDH-F 333
+L +A+ ++G G T S + R L G N DLVDH +
Sbjct: 218 SLFHRAVLQSGTPNGPWATVSAGEARRRATLLARLVGCNDTELIACLRTRPAQDLVDHEW 277
Query: 334 H---SRGLYRSIFLSIMDGEESLRQYSPEVLVQ 363
H ++R F+ ++DG+ +PE L+
Sbjct: 278 HVLPQESIFRFSFVPVVDGD--FLSDTPEALIN 308
>pdb|3DL7|B Chain B, Aged Form Of Mouse Acetylcholinesterase Inhibited By
Tabun- Update
Length = 534
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 90/213 (42%), Gaps = 50/213 (23%)
Query: 195 FPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERD-IIVACIDYRNFPQGTIKDMV 253
+P+ + P PV+ +I GG + G + G+ L++ + ++ ++YR GT +
Sbjct: 102 YPRPAS-PTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYR---VGTFGFLA 157
Query: 254 KDASQ-------------GISFVCNNISEYGGDPDRIYLMGQ------SAGAHIAAC--- 291
S+ + +V NI+ +GGDP + L G+ S G HI +
Sbjct: 158 LPGSREAPGNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGEXXAGAASVGMHILSLPSR 217
Query: 292 TLLEQAIKETG--EGESTTWSVSQIRAYFGLSG---GYN------------LFDLVDH-F 333
+L +A+ ++G G T S + R L G N DLVDH +
Sbjct: 218 SLFHRAVLQSGTPNGPWATVSAGEARRRATLLARLVGCNDTELIACLRTRPAQDLVDHEW 277
Query: 334 H---SRGLYRSIFLSIMDGEESLRQYSPEVLVQ 363
H ++R F+ ++DG+ +PE L+
Sbjct: 278 HVLPQESIFRFSFVPVVDGD--FLSDTPEALIN 308
>pdb|2JGE|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Non-Aged Methamidophos
pdb|2JGJ|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Aged Methamidophos
Length = 536
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 90/213 (42%), Gaps = 50/213 (23%)
Query: 195 FPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLSERD-IIVACIDYRNFPQGTIKDMV 253
+P+ + P PV+ +I GG + G + G+ L++ + ++ ++YR GT +
Sbjct: 105 YPRPAS-PTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYR---VGTFGFLA 160
Query: 254 KDASQ-------------GISFVCNNISEYGGDPDRIYLMGQ------SAGAHIAAC--- 291
S+ + +V NI+ +GGDP + L G+ S G HI +
Sbjct: 161 LPGSREAPGNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGEXXAGAASVGMHILSLPSR 220
Query: 292 TLLEQAIKETG--EGESTTWSVSQIRAYFGLSG---GYN------------LFDLVDH-F 333
+L +A+ ++G G T S + R L G N DLVDH +
Sbjct: 221 SLFHRAVLQSGTPNGPWATVSAGEARRRATLLARLVGCNDTELIACLRTRPAQDLVDHEW 280
Query: 334 H---SRGLYRSIFLSIMDGEESLRQYSPEVLVQ 363
H ++R F+ ++DG+ +PE L+
Sbjct: 281 HVLPQESIFRFSFVPVVDGD--FLSDTPEALIN 311
>pdb|1UT6|A Chain A, Structure Of Acetylcholinesterase (E.C. 3.1.1.7) Complexed
With N-9-(1',2',3',4'-Tetrahydroacridinyl)-1,8-
Diaminooctane At 2.4 Angstroms Resolution.
pdb|1ACJ|A Chain A, Quaternary Ligand Binding To Aromatic Residues In The
Active-Site Gorge Of Acetylcholinesterase
pdb|1ACL|A Chain A, Quaternary Ligand Binding To Aromatic Residues In The
Active-Site Gorge Of Acetylcholinesterase
Length = 537
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 19/141 (13%)
Query: 191 LDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLS-ERDIIVACIDYRNFPQGTI 249
L+++ P V+ +I GG + G G+ L+ ++++ + YR G +
Sbjct: 97 LNIWVPSPRPKSTTVMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFL 156
Query: 250 ----------KDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGA-----HI---AAC 291
+ D + +V +NI +GGDP + + G+SAG HI +
Sbjct: 157 ALHGSQEAPGNVGLLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSR 216
Query: 292 TLLEQAIKETGEGESTTWSVS 312
L +AI ++G SVS
Sbjct: 217 DLFRRAILQSGSPNCPWASVS 237
>pdb|3I6M|A Chain A, 3d Structure Of Torpedo Californica Acetylcholinesterase
Complexed With N-Piperidinopropyl-Galanthamine
pdb|3I6Z|A Chain A, 3d Structure Of Torpedo Californica Acetylcholinesterase
Complexed With N-Saccharinohexyl-Galanthamine
Length = 534
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 19/141 (13%)
Query: 191 LDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLS-ERDIIVACIDYRNFPQGTI 249
L+++ P V+ +I GG + G G+ L+ ++++ + YR G +
Sbjct: 96 LNIWVPSPRPKSTTVMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFL 155
Query: 250 ----------KDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGA-----HI---AAC 291
+ D + +V +NI +GGDP + + G+SAG HI +
Sbjct: 156 ALHGSQEAPGNVGLLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSR 215
Query: 292 TLLEQAIKETGEGESTTWSVS 312
L +AI ++G SVS
Sbjct: 216 DLFRRAILQSGSPNCPWASVS 236
>pdb|1GQR|A Chain A, Acetylcholinesterase (E.C. 3.1.1.7) Complexed With
Rivastigmine
pdb|1GQS|A Chain A, Acetylcholinesterase (E.C. 3.1.1.7) Complexed With Nap
pdb|1JJB|A Chain A, A Neutral Molecule In Cation-Binding Site: Specific
Binding Of Peg-Sh To Acetylcholinesterase From Torpedo
Californica
Length = 532
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 19/141 (13%)
Query: 191 LDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLS-ERDIIVACIDYRNFPQGTI 249
L+++ P V+ +I GG + G G+ L+ ++++ + YR G +
Sbjct: 94 LNIWVPSPRPKSTTVMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFL 153
Query: 250 ----------KDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGA-----HI---AAC 291
+ D + +V +NI +GGDP + + G+SAG HI +
Sbjct: 154 ALHGSQEAPGNVGLLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSR 213
Query: 292 TLLEQAIKETGEGESTTWSVS 312
L +AI ++G SVS
Sbjct: 214 DLFRRAILQSGSPNCPWASVS 234
>pdb|1EEA|A Chain A, Acetylcholinesterase
Length = 534
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 19/141 (13%)
Query: 191 LDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLS-ERDIIVACIDYRNFPQGTI 249
L+++ P V+ +I GG + G G+ L+ ++++ + YR G +
Sbjct: 97 LNIWVPSPRPKSTTVMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFL 156
Query: 250 ----------KDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGA-----HI---AAC 291
+ D + +V +NI +GGDP + + G+SAG HI +
Sbjct: 157 ALHGSQEAPGNVGLLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSR 216
Query: 292 TLLEQAIKETGEGESTTWSVS 312
L +AI ++G SVS
Sbjct: 217 DLFRRAILQSGSPNCPWASVS 237
>pdb|2W6C|X Chain X, Ache In Complex With A Bis-(-)-Nor-Meptazinol Derivative
pdb|2W9I|A Chain A, Ache In Complex With Methylene Blue
Length = 586
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 19/141 (13%)
Query: 191 LDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLS-ERDIIVACIDYRNFPQGTI 249
L+++ P V+ +I GG + G G+ L+ ++++ + YR G +
Sbjct: 118 LNIWVPSPRPKSTTVMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFL 177
Query: 250 ----------KDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGA-----HI---AAC 291
+ D + +V +NI +GGDP + + G+SAG HI +
Sbjct: 178 ALHGSQEAPGNVGLLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSR 237
Query: 292 TLLEQAIKETGEGESTTWSVS 312
L +AI ++G SVS
Sbjct: 238 DLFRRAILQSGSPNCPWASVS 258
>pdb|2CEK|A Chain A, Conformational Flexibility In The Peripheral Site Of
Torpedo Californica Acetylcholinesterase Revealed By The
Complex Structure With A Bifunctional Inhibitor
Length = 535
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 19/141 (13%)
Query: 191 LDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLS-ERDIIVACIDYRNFPQGTI 249
L+++ P V+ +I GG + G G+ L+ ++++ + YR G +
Sbjct: 97 LNIWVPSPRPKSTTVMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFL 156
Query: 250 ----------KDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGA-----HI---AAC 291
+ D + +V +NI +GGDP + + G+SAG HI +
Sbjct: 157 ALHGSQEAPGNVGLLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSR 216
Query: 292 TLLEQAIKETGEGESTTWSVS 312
L +AI ++G SVS
Sbjct: 217 DLFRRAILQSGSPNCPWASVS 237
>pdb|1FSS|A Chain A, Acetylcholinesterase (E.C. 3.1.1.7) Complexed With
Fasciculin-Ii
pdb|1CFJ|A Chain A, Methylphosphonylated Acetylcholinesterase (Aged) Obtained
By Reaction With O-Isopropylmethylphosphonofluoridate
(Gb, Sarin)
pdb|1VXO|A Chain A, Methylphosphonylated Acetylcholinesterase (Aged) Obtained
By Reaction With
O-Ethyl-S-[2-[bis(1-Methylethyl)amino]ethyl]
Methylphosphonothioate (Vx)
pdb|1VXR|A Chain A, O-Ethylmethylphosphonylated Acetylcholinesterase Obtained
By Reaction With
O-Ethyl-S-[2-[bis(1-Methylethyl)amino]ethyl]
Methylphosphonothioate (Vx)
pdb|1QTI|A Chain A, Acetylcholinesterase (E.C.3.1.1.7)
pdb|1QID|A Chain A, Specific Chemical And Structural Damage At Nine Time
Points (Point A) Caused By Intense Synchrotron Radiation
To Torpedo Californica Acetylcholinesterase
pdb|1QIE|A Chain A, Specific Chemical And Structural Damage At Nine Time
Points (Point B) Caused By Intense Synchrotron Radiation
To Torpedo Californica Acetylcholinesterase
pdb|1QIF|A Chain A, Specific Chemical And Structural Damage At Nine Time
Points (Point C) Caused By Intense Synchrotron Radiation
To Torpedo Californica Acetylcholinesterase
pdb|1QIG|A Chain A, Specific Chemical And Structural Damage At Nine Time
Points (Point D) Caused By Intense Synchrotron Radiation
To Torpedo Californica Acetylcholinesterase
pdb|1QIH|A Chain A, Specific Chemical And Structural Damage At Nine Time
Points (Point E) Caused By Intense Synchrotron Radiation
To Torpedo Californica Acetylcholinesterase
pdb|1QII|A Chain A, Specific Chemical And Structural Damage At Nine Time
Points (Point F) Caused By Intense Synchrotron Radiation
To Torpedo Californica Acetylcholinesterase
pdb|1QIJ|A Chain A, Specific Chemical And Structural Damage At Nine Time
Points (Point G) Caused By Intense Synchrotron Radiation
To Torpedo Californica Acetylcholinesterase
pdb|1QIK|A Chain A, Specific Chemical And Structural Damage At Nine Time
Points (Point H) Caused By Intense Synchrotron Radiation
To Torpedo Californica Acetylcholinesterase
pdb|1QIM|A Chain A, Specific Chemical And Structural Damage At Nine Time
Points (Point I) Caused By Intense Synchrotron Radiation
To Torpedo Californica Acetylcholinesterase
pdb|1EA5|A Chain A, Native Acetylcholinesterase (E.C. 3.1.1.7) From Torpedo
Californica At 1.8a Resolution
pdb|1GPK|A Chain A, Structure Of Acetylcholinesterase Complex With
(+)-Huperzine A At 2.1a Resolution
pdb|1GPN|A Chain A, Structure Of Acetylcholinesterase Complexed With Huperzine
B At 2.35a Resolution
pdb|2C4H|A Chain A, Torpedo Californica Acetylcholinesterase In Complex With
500mm Acetylthiocholine
pdb|2C5F|A Chain A, Torpedo Californica Acetylcholinesterase In Complex With A
Non Hydrolysable Substrate Analogue, 4-Oxo-N,N,N-
Trimethylpentanaminium
pdb|2C5G|A Chain A, Torpedo Californica Acetylcholinesterase In Complex With
20mm Thiocholine
pdb|1AMN|A Chain A, Transition State Analog: Acetylcholinesterase Complexed
With M-(N,N,N-Trimethylammonio)trifluoroacetophenone
pdb|1AX9|A Chain A, Acetylcholinesterase Complexed With Edrophonium, Laue Data
pdb|1OCE|A Chain A, Acetylcholinesterase (E.C. 3.1.1.7) Complexed With Mf268
pdb|1VOT|A Chain A, Acetylcholinesterase (E.C. 3.1.1.7) Complexed With
Huperzine A
pdb|2ACE|A Chain A, Native Acetylcholinesterase (E.C. 3.1.1.7) From Torpedo
Californica
pdb|2ACK|A Chain A, Acetylcholinesterase Complexed With Edrophonium,
Monochromatic Data
pdb|2V96|A Chain A, Structure Of The Unphotolysed Complex Of Tcache With 1-(2-
Nitrophenyl)-2,2,2-Trifluoroethyl-Arsenocholine At 100k
pdb|2V96|B Chain B, Structure Of The Unphotolysed Complex Of Tcache With 1-(2-
Nitrophenyl)-2,2,2-Trifluoroethyl-Arsenocholine At 100k
pdb|2V97|A Chain A, Structure Of The Unphotolysed Complex Of Tcache With
1-(2- Nitrophenyl)-2,2,2-Trifluoroethyl-Arsenocholine
After A 9 Seconds Annealing To Room Temperature
pdb|2V97|B Chain B, Structure Of The Unphotolysed Complex Of Tcache With
1-(2- Nitrophenyl)-2,2,2-Trifluoroethyl-Arsenocholine
After A 9 Seconds Annealing To Room Temperature
pdb|2V98|A Chain A, Structure Of The Complex Of Tcache With
1-(2-Nitrophenyl)-2, 2,2-Trifluoroethyl-Arsenocholine
After A 9 Seconds Annealing To Room Temperature, During
The First 5 Seconds Of Which Laser Irradiation At 266nm
Took Place
pdb|2V98|B Chain B, Structure Of The Complex Of Tcache With
1-(2-Nitrophenyl)-2, 2,2-Trifluoroethyl-Arsenocholine
After A 9 Seconds Annealing To Room Temperature, During
The First 5 Seconds Of Which Laser Irradiation At 266nm
Took Place
pdb|2VA9|A Chain A, Structure Of Native Tcache After A 9 Seconds Annealing To
Room Temperature During The First 5 Seconds Of Which
Laser Irradiation At 266nm Took Place
pdb|2VA9|B Chain B, Structure Of Native Tcache After A 9 Seconds Annealing To
Room Temperature During The First 5 Seconds Of Which
Laser Irradiation At 266nm Took Place
pdb|2VJA|A Chain A, Torpedo Californica Acetylcholinesterase In Complex With A
Non Hydrolysable Substrate Analogue, 4-Oxo-N,N,N-
Trimethylpentanaminium - Orthorhombic Space Group -
Dataset A At 100k
pdb|2VJA|B Chain B, Torpedo Californica Acetylcholinesterase In Complex With A
Non Hydrolysable Substrate Analogue, 4-Oxo-N,N,N-
Trimethylpentanaminium - Orthorhombic Space Group -
Dataset A At 100k
pdb|2VJB|A Chain A, Torpedo Californica Acetylcholinesterase In Complex With A
Non Hydrolysable Substrate Analogue, 4-Oxo-N,N,N-
Trimethylpentanaminium - Orthorhombic Space Group -
Dataset D At 100k
pdb|2VJB|B Chain B, Torpedo Californica Acetylcholinesterase In Complex With A
Non Hydrolysable Substrate Analogue, 4-Oxo-N,N,N-
Trimethylpentanaminium - Orthorhombic Space Group -
Dataset D At 100k
pdb|2VJC|A Chain A, Torpedo Californica Acetylcholinesterase In Complex With A
Non Hydrolysable Substrate Analogue, 4-oxo-n,n,n-
Trimethylpentanaminium - Orthorhombic Space Group -
Dataset A At 150k
pdb|2VJC|B Chain B, Torpedo Californica Acetylcholinesterase In Complex With A
Non Hydrolysable Substrate Analogue, 4-oxo-n,n,n-
Trimethylpentanaminium - Orthorhombic Space Group -
Dataset A At 150k
pdb|2VJD|A Chain A, Torpedo Californica Acetylcholinesterase In Complex With A
Non Hydrolysable Substrate Analogue, 4-Oxo-N,N,N-
Trimethylpentanaminium - Orthorhombic Space Group -
Dataset C At 150k
pdb|2VJD|B Chain B, Torpedo Californica Acetylcholinesterase In Complex With A
Non Hydrolysable Substrate Analogue, 4-Oxo-N,N,N-
Trimethylpentanaminium - Orthorhombic Space Group -
Dataset C At 150k
pdb|2VT6|A Chain A, Native Torpedo Californica Acetylcholinesterase Collected
With A Cumulated Dose Of 9400000 Gy
pdb|2VT6|B Chain B, Native Torpedo Californica Acetylcholinesterase Collected
With A Cumulated Dose Of 9400000 Gy
pdb|2VT7|A Chain A, Native Torpedo Californica Acetylcholinesterase Collected
With A Cumulated Dose Of 800000 Gy
pdb|2VT7|B Chain B, Native Torpedo Californica Acetylcholinesterase Collected
With A Cumulated Dose Of 800000 Gy
pdb|2WFZ|A Chain A, Non-Aged Conjugate Of Torpedo Californica
Acetylcholinesterase With Soman
pdb|2WG0|A Chain A, Aged Conjugate Of Torpedo Californica Acetylcholinesterase
With Soman (Obtained By In Crystallo Aging)
pdb|2WG1|A Chain A, Ternary Complex Of The Aged Conjugate Of Torpedo
Californica Aceylcholinesterase With Soman And 2-Pam
pdb|2WG2|A Chain A, Non-Aged Conjugate Of Torpedo Californica
Acetylcholinesterase With Soman (Alternative Refinement)
pdb|2XI4|A Chain A, Torpedo Californica Acetylcholinesterase In Complex With
Aflatoxin B1 (Orthorhombic Space Group)
pdb|2XI4|B Chain B, Torpedo Californica Acetylcholinesterase In Complex With
Aflatoxin B1 (Orthorhombic Space Group)
Length = 537
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 19/141 (13%)
Query: 191 LDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLS-ERDIIVACIDYRNFPQGTI 249
L+++ P V+ +I GG + G G+ L+ ++++ + YR G +
Sbjct: 97 LNIWVPSPRPKSTTVMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFL 156
Query: 250 ----------KDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGA-----HI---AAC 291
+ D + +V +NI +GGDP + + G+SAG HI +
Sbjct: 157 ALHGSQEAPGNVGLLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSR 216
Query: 292 TLLEQAIKETGEGESTTWSVS 312
L +AI ++G SVS
Sbjct: 217 DLFRRAILQSGSPNCPWASVS 237
>pdb|1SOM|A Chain A, Torpedo Californica Acetylcholinesterase Inhibited By
Nerve Agent Gd (Soman).
pdb|1DX6|A Chain A, Structure Of Acetylcholinesterase Complexed With
(-)-Galanthamine At 2.3a Resolution
pdb|1E3Q|A Chain A, Torpedo Californica Acetylcholinesterase Complexed With
Bw284c51
pdb|1E66|A Chain A, Structure Of Acetylcholinesterase Complexed With
(-)-Huprine X At 2.1a Resolution
pdb|1HBJ|A Chain A, X-Ray Crystal Structure Of Complex Between Torpedo
Californica Ache And A Reversible Inhibitor, 4-Amino-5-
Fluo Ro-2-Methyl-3-(3-Trifluoroacetylbenzylthiomethyl)
Quinoline
pdb|1H22|A Chain A, Structure Of Acetylcholinesterase (E.C. 3.1.1.7) Complexed
With (S,S)-(-)-Bis(10)-Hupyridone At 2.15a Resolution
pdb|1H23|A Chain A, Structure Of Acetylcholinesterase (E.C. 3.1.1.7) Complexed
With (S,S)-(-)-Bis(12)-Hupyridone At 2.15a Resolution
pdb|1W4L|A Chain A, Complex Of Tcache With Bis-Acting Galanthamine Derivative
pdb|1W6R|A Chain A, Complex Of Tcache With Galanthamine Derivative
pdb|1W75|A Chain A, Native Orthorhombic Form Of Torpedo Californica
Acetylcholinesterase (Ache)
pdb|1W75|B Chain B, Native Orthorhombic Form Of Torpedo Californica
Acetylcholinesterase (Ache)
pdb|1W76|A Chain A, Orthorhombic Form Of Torpedo Californica
Acetylcholinesterase (Ache) Complexed With Bis-Acting
Galanthamine Derivative
pdb|1W76|B Chain B, Orthorhombic Form Of Torpedo Californica
Acetylcholinesterase (Ache) Complexed With Bis-Acting
Galanthamine Derivative
pdb|1ODC|A Chain A, Structure Of Acetylcholinesterase (E.C. 3.1.1.7) Complexed
With N-4'-Quinolyl-N'-9"-(1",2",3",4"
-Tetrahydroacridinyl)-1,8-Diaminooctane At 2.2a
Resolution
pdb|1U65|A Chain A, Ache W. Cpt-11
pdb|1ZGB|A Chain A, Crystal Structure Of Torpedo Californica
Acetylcholinesterase In Complex With An
(R)-Tacrine(10)-Hupyridone Inhibitor.
pdb|1ZGC|A Chain A, Crystal Structure Of Torpedo Californica
Acetylcholinesterase In Complex With An
(Rs)-Tacrine(10)-Hupyridone Inhibitor.
pdb|1ZGC|B Chain B, Crystal Structure Of Torpedo Californica
Acetylcholinesterase In Complex With An
(Rs)-Tacrine(10)-Hupyridone Inhibitor.
pdb|2BAG|A Chain A, 3d Structure Of Torpedo Californica Acetylcholinesterase
Complexed With Ganstigmine
pdb|2CKM|A Chain A, Torpedo Californica Acetylcholinesterase Complexed With
Alkylene-Linked Bis-Tacrine Dimer (7 Carbon Linker)
pdb|2CMF|A Chain A, Torpedo Californica Acetylcholinesterase Complexed With
Alkylene-Linked Bis-Tacrine Dimer (5 Carbon Linker)
pdb|2J4F|A Chain A, Torpedo Acetylcholinesterase - Hg Heavy-Atom Derivative
pdb|1EVE|A Chain A, Three Dimensional Structure Of The Anti-Alzheimer Drug,
E2020 (Aricept), Complexed With Its Target
Acetylcholinesterase
pdb|2J3Q|A Chain A, Torpedo Acetylcholinesterase Complexed With Fluorophore
Thioflavin T
pdb|2VQ6|A Chain A, Torpedo Californica Acetylcholinesterase Complexed With 2-
Pam
pdb|2J3D|A Chain A, Native Monoclinic Form Of Torpedo Acetylcholinesterase
pdb|3M3D|A Chain A, Crystal Structure Of Acetylcholinesterase In Complex With
Xenon
pdb|3ZV7|A Chain A, Torpedo Californica Acetylcholinesterase Inhibition By
Bisnorcymserine
Length = 543
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 19/141 (13%)
Query: 191 LDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLS-ERDIIVACIDYRNFPQGTI 249
L+++ P V+ +I GG + G G+ L+ ++++ + YR G +
Sbjct: 97 LNIWVPSPRPKSTTVMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFL 156
Query: 250 ----------KDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGA-----HI---AAC 291
+ D + +V +NI +GGDP + + G+SAG HI +
Sbjct: 157 ALHGSQEAPGNVGLLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSR 216
Query: 292 TLLEQAIKETGEGESTTWSVS 312
L +AI ++G SVS
Sbjct: 217 DLFRRAILQSGSPNCPWASVS 237
>pdb|3GEL|A Chain A, O-Methylphosphorylated Torpedo Acetylcholinesterase
Obtained By Reaction With Methyl Paraoxon (Aged)
Length = 532
Score = 32.3 bits (72), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 58/141 (41%), Gaps = 19/141 (13%)
Query: 191 LDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLS-ERDIIVACIDYRNFPQGTI 249
L+++ P V+ +I GG + G G+ L+ ++++ + YR G +
Sbjct: 94 LNIWVPSPRPKSTTVMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFL 153
Query: 250 ----------KDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGA-----HI---AAC 291
+ D + +V +NI +GGDP + + G+ AG HI +
Sbjct: 154 ALHGSQEAPGNVGLLDQRMALQWVHDNIQFFGGDPKTVTIFGEXAGGASVGMHILSPGSR 213
Query: 292 TLLEQAIKETGEGESTTWSVS 312
L +AI ++G SVS
Sbjct: 214 DLFRRAILQSGSPNCPWASVS 234
>pdb|2DFP|A Chain A, X-Ray Structure Of Aged Di-Isopropyl-Phosphoro-Fluoridate
(Dfp) Bound To Acetylcholinesterase
Length = 534
Score = 32.3 bits (72), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 58/141 (41%), Gaps = 19/141 (13%)
Query: 191 LDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLS-ERDIIVACIDYRNFPQGTI 249
L+++ P V+ +I GG + G G+ L+ ++++ + YR G +
Sbjct: 96 LNIWVPSPRPKSTTVMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFL 155
Query: 250 ----------KDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGA-----HI---AAC 291
+ D + +V +NI +GGDP + + G+ AG HI +
Sbjct: 156 ALHGSQEAPGNVGLLDQRMALQWVHDNIQFFGGDPKTVTIFGEXAGGASVGMHILSPGSR 215
Query: 292 TLLEQAIKETGEGESTTWSVS 312
L +AI ++G SVS
Sbjct: 216 DLFRRAILQSGSPNCPWASVS 236
>pdb|2C58|A Chain A, Torpedo Californica Acetylcholinesterase In Complex With
20mm Acetylthiocholine
Length = 537
Score = 32.0 bits (71), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 58/141 (41%), Gaps = 19/141 (13%)
Query: 191 LDLYFPKSSDGPKPVVAFITGGAWIIGYKAWGSLLGQQLS-ERDIIVACIDYRNFPQGTI 249
L+++ P V+ +I GG + G G+ L+ ++++ + YR G +
Sbjct: 97 LNIWVPSPRPKSTTVMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFL 156
Query: 250 ----------KDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGA-----HI---AAC 291
+ D + +V +NI +GGDP + + G+ AG HI +
Sbjct: 157 ALHGSQEAPGNVGLLDQRMALQWVHDNIQFFGGDPKTVTIFGEXAGGASVGMHILSPGSR 216
Query: 292 TLLEQAIKETGEGESTTWSVS 312
L +AI ++G SVS
Sbjct: 217 DLFRRAILQSGSPNCPWASVS 237
>pdb|3HXK|A Chain A, Crystal Structure Of A Sugar Hydrolase (Yeeb) From
Lactococcus Lactis, Northeast Structural Genomics
Consortium Target Kr108
pdb|3HXK|B Chain B, Crystal Structure Of A Sugar Hydrolase (Yeeb) From
Lactococcus Lactis, Northeast Structural Genomics
Consortium Target Kr108
pdb|3HXK|C Chain C, Crystal Structure Of A Sugar Hydrolase (Yeeb) From
Lactococcus Lactis, Northeast Structural Genomics
Consortium Target Kr108
pdb|3HXK|D Chain D, Crystal Structure Of A Sugar Hydrolase (Yeeb) From
Lactococcus Lactis, Northeast Structural Genomics
Consortium Target Kr108
Length = 276
Score = 32.0 bits (71), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Query: 236 VACIDYRNFPQGT----IKDMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAHIAA 290
V ++Y +GT + +++ S + N E+ +P++++L+G SAG H+AA
Sbjct: 76 VLLLNYTVXNKGTNYNFLSQNLEEVQAVFSLIHQNHKEWQINPEQVFLLGCSAGGHLAA 134
>pdb|2ECF|A Chain A, Crystal Structure Of Dipeptidyl Aminopeptidase Iv From
Stenotrophomonas Maltophilia
Length = 741
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 24/49 (48%)
Query: 369 HAVSLLPPIILFHGTADYSIPADASKNFANTLQRVGVRAESILYEGKTH 417
H L P++L HG AD ++ S + + LQ+ G E + Y G H
Sbjct: 669 HIEGLRSPLLLIHGMADDNVLFTNSTSLMSALQKRGQPFELMTYPGAKH 717
>pdb|3K6K|A Chain A, Crystal Structure At 2.2 Angstrom Of Hsl-Homolog Este7
From A Metagenome Library
pdb|3K6K|B Chain B, Crystal Structure At 2.2 Angstrom Of Hsl-Homolog Este7
From A Metagenome Library
pdb|3K6K|C Chain C, Crystal Structure At 2.2 Angstrom Of Hsl-Homolog Este7
From A Metagenome Library
pdb|3K6K|D Chain D, Crystal Structure At 2.2 Angstrom Of Hsl-Homolog Este7
From A Metagenome Library
Length = 322
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 42/98 (42%), Gaps = 7/98 (7%)
Query: 206 VAFITGGAWIIGYKAWGSLLGQQLSERD-IIVACIDYRNFPQGTIKDMVKDASQGISFVC 264
+ + GG +I G + +L QL+++ + +DYR P+ V D +
Sbjct: 83 ILYFHGGGYISGSPSTHLVLTTQLAKQSSATLWSLDYRLAPENPFPAAVDDCVAAYRALL 142
Query: 265 NNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETG 302
G DRI + G SAG + ++L+ KE G
Sbjct: 143 KT----AGSADRIIIAGDSAGGGLTTASMLKA--KEDG 174
>pdb|3DNM|A Chain A, Crystal Structure Hormone-Sensitive Lipase From A
Metagenome Library
pdb|3DNM|B Chain B, Crystal Structure Hormone-Sensitive Lipase From A
Metagenome Library
pdb|3DNM|C Chain C, Crystal Structure Hormone-Sensitive Lipase From A
Metagenome Library
pdb|3DNM|D Chain D, Crystal Structure Hormone-Sensitive Lipase From A
Metagenome Library
Length = 336
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 42/98 (42%), Gaps = 7/98 (7%)
Query: 206 VAFITGGAWIIGYKAWGSLLGQQLSERD-IIVACIDYRNFPQGTIKDMVKDASQGISFVC 264
+ + GG +I G + +L QL+++ + +DYR P+ V D +
Sbjct: 97 ILYFHGGGYISGSPSTHLVLTTQLAKQSSATLWSLDYRLAPENPFPAAVDDCVAAYRALL 156
Query: 265 NNISEYGGDPDRIYLMGQSAGAHIAACTLLEQAIKETG 302
G DRI + G SAG + ++L+ KE G
Sbjct: 157 KT----AGSADRIIIAGDSAGGGLTTASMLKA--KEDG 188
>pdb|3F67|A Chain A, Crystal Structure Of Putative Dienelactone Hydrolase From
Klebsiella Pneumoniae Subsp. Pneumoniae Mgh 78578
Length = 241
Score = 29.6 bits (65), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 22/49 (44%)
Query: 370 AVSLLPPIILFHGTADYSIPADASKNFANTLQRVGVRAESILYEGKTHT 418
AV L P++ +G D SIP D + L+ AE ++Y H
Sbjct: 165 AVDLNAPVLGLYGAKDASIPQDTVETXRQALRAANATAEIVVYPEADHA 213
>pdb|3KHK|A Chain A, Crystal Structure Of Type-I Restriction-Modification
System Methylation Subunit (Mm_0429) From
Methanosarchina Mazei.
pdb|3KHK|B Chain B, Crystal Structure Of Type-I Restriction-Modification
System Methylation Subunit (Mm_0429) From
Methanosarchina Mazei
Length = 544
Score = 29.6 bits (65), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 20/30 (66%)
Query: 32 TTSLLISSEYEDVEKAITSIKPVLSRTSSY 61
+ S LI + ++D+EKA +K +L+R S Y
Sbjct: 139 SVSWLIDNAFDDIEKANPKLKGILNRISQY 168
>pdb|3VAY|A Chain A, Crystal Structure Of 2-Haloacid Dehalogenase From
Pseudomonas Syringae Pv. Tomato Dc3000
pdb|3VAY|B Chain B, Crystal Structure Of 2-Haloacid Dehalogenase From
Pseudomonas Syringae Pv. Tomato Dc3000
Length = 230
Score = 29.3 bits (64), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 25/48 (52%)
Query: 351 ESLRQYSPEVLVQDPNTRHAVSLLPPIILFHGTADYSIPADASKNFAN 398
E L + +L +DP+ +H +S L +LFH D +D ++ A+
Sbjct: 44 EHLWEIRSRLLDEDPSFKHRISALRRRVLFHALEDAGYDSDEAQQLAD 91
>pdb|3H04|A Chain A, The Crystal Structure Of The Protein With Unknown Function
From Staphylococcus Aureus Subsp. Aureus Mu50
Length = 275
Score = 29.3 bits (64), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 96/243 (39%), Gaps = 55/243 (22%)
Query: 197 KSSDGP-KPVVAFITGGAWIIGYKAWGSLLGQQLSERDIIVACID-----YRNFPQGTIK 250
K+ + P K V+ +I GG + G KA L Q + DI+ D YR P+ ++
Sbjct: 22 KAKNQPTKGVIVYIHGGGLMFG-KA-NDLSPQYI---DILTEHYDLIQLSYRLLPEVSLD 76
Query: 251 DMVKDASQGISFVCNNISEYGGDPDRIYLMGQSAGAH----IAACTLLEQAIKETGEGES 306
+++D + S+Y P I+ G+S+GA+ IA ++ I G
Sbjct: 77 CIIEDVYASFDAIQ---SQYSNCP--IFTFGRSSGAYLSLLIARDRDIDGVIDFYGYSRI 131
Query: 307 TTWSVSQIRAYFG-LSGGYNLFDLVD------------------HFHSRGLYRSI-FLSI 346
T +Y+ ++ N + + ++RG + I ++I
Sbjct: 132 NTEPFKTTNSYYAKIAQSINETMIAQLTSPTPVVQDQIAQRFLIYVYARGTGKWINMINI 191
Query: 347 MDGEESLRQYSPEVLVQDPNTRHAVSLLPPIILFHGTADYSIPADASKNFAN-----TLQ 401
D +S +P+ L LPP+ + H DY +P + S++ N T +
Sbjct: 192 ADYTDSKYNIAPDEL----------KTLPPVFIAHCNGDYDVPVEESEHIMNHVPHSTFE 241
Query: 402 RVG 404
RV
Sbjct: 242 RVN 244
>pdb|1BU8|A Chain A, Rat Pancreatic Lipase Related Protein 2
Length = 452
Score = 28.9 bits (63), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 38/90 (42%), Gaps = 9/90 (10%)
Query: 208 FITGGAWIIGYKAWG-SLLGQQLSERDIIVACIDYR-----NFPQGTIKDMVKDASQGIS 261
FI G G W + + + C+D+R + Q + V A I+
Sbjct: 74 FIVHGFIDKGEDGWLLDMCKKMFQVEKVNCICVDWRRGSRTEYTQASYNTRVVGAE--IA 131
Query: 262 FVCNNIS-EYGGDPDRIYLMGQSAGAHIAA 290
F+ +S E G P+ ++L+G S GAH+
Sbjct: 132 FLVQVLSTEMGYSPENVHLIGHSLGAHVVG 161
>pdb|3C5V|A Chain A, Pp2a-Specific Methylesterase Apo Form (Pme)
Length = 316
Score = 28.9 bits (63), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 8/93 (8%)
Query: 204 PVVAFITGGAWIIGYKA--WGSLLGQQLSERDIIVACIDYRNFPQGTIKDMVKDASQGIS 261
PV+ + GG G+ A W +S + +D R+ + +K+ +++ ++
Sbjct: 39 PVLLLLHGG----GHSALSWAVFTAAIISRVQCRIVALDLRSHGETKVKNPEDLSAETMA 94
Query: 262 FVCNNISE--YGGDPDRIYLMGQSAGAHIAACT 292
N+ E YG P I L+G S G IA T
Sbjct: 95 KDVGNVVEAMYGDLPPPIMLIGHSMGGAIAVHT 127
>pdb|2JID|A Chain A, Human Dipeptidyl Peptidase Iv In Complex With 1-(3,4-
Dimethoxy-Phenyl)-3-M-Tolyl-Piperidine-4-Ylamine
pdb|2JID|B Chain B, Human Dipeptidyl Peptidase Iv In Complex With 1-(3,4-
Dimethoxy-Phenyl)-3-M-Tolyl-Piperidine-4-Ylamine
Length = 736
Score = 28.5 bits (62), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Query: 338 LYRSIFLSIMDGEESLRQYSPEVLVQDPNTRHAVSLLPPIILFHGTADYSIPADASKNFA 397
+Y ++ + E++L Y ++ V L L HGTAD ++ S +
Sbjct: 635 VYTERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYL----LIHGTADDNVHFQQSAQIS 690
Query: 398 NTLQRVGVRAESILYEGKTH 417
L VGV +++ Y + H
Sbjct: 691 KALVDVGVDFQAMWYTDEDH 710
>pdb|4A5S|A Chain A, Crystal Structure Of Human Dpp4 In Complex With A Noval
Heterocyclic Dpp4 Inhibitor
pdb|4A5S|B Chain B, Crystal Structure Of Human Dpp4 In Complex With A Noval
Heterocyclic Dpp4 Inhibitor
Length = 740
Score = 28.5 bits (62), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 34/81 (41%), Gaps = 4/81 (4%)
Query: 337 GLYRSIFLSIMDGEESLRQYSPEVLVQDPNTRHAVSLLPPIILFHGTADYSIPADASKNF 396
+Y ++ + E++L Y ++ V L L HGTAD ++ S
Sbjct: 626 SVYTERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYL----LIHGTADDNVHFQQSAQI 681
Query: 397 ANTLQRVGVRAESILYEGKTH 417
+ L VGV +++ Y + H
Sbjct: 682 SKALVDVGVDFQAMWYTDEDH 702
>pdb|1J2E|A Chain A, Crystal Structure Of Human Dipeptidyl Peptidase Iv
pdb|1J2E|B Chain B, Crystal Structure Of Human Dipeptidyl Peptidase Iv
pdb|1WCY|A Chain A, Crystal Structure Of Human Dipeptidyl Peptidase Iv (dppiv)
Complex With Diprotin A
pdb|1WCY|B Chain B, Crystal Structure Of Human Dipeptidyl Peptidase Iv (dppiv)
Complex With Diprotin A
pdb|3VJM|A Chain A, Crystal Structure Of Human Depiptidyl Peptidase Iv (Dpp-4)
In Complex With A Prolylthiazolidine Inhibitor #1
pdb|3VJM|B Chain B, Crystal Structure Of Human Depiptidyl Peptidase Iv (Dpp-4)
In Complex With A Prolylthiazolidine Inhibitor #1
pdb|3VJK|A Chain A, Crystal Structure Of Human Depiptidyl Peptidase Iv (Dpp-4)
In Complex With Mp-513
pdb|3VJK|B Chain B, Crystal Structure Of Human Depiptidyl Peptidase Iv (Dpp-4)
In Complex With Mp-513
pdb|3VJL|A Chain A, Crystal Structure Of Human Depiptidyl Peptidase Iv (Dpp-4)
In Complex With A Prolylthiazolidine Inhibitor #2
pdb|3VJL|B Chain B, Crystal Structure Of Human Depiptidyl Peptidase Iv (Dpp-4)
In Complex With A Prolylthiazolidine Inhibitor #2
Length = 740
Score = 28.5 bits (62), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Query: 338 LYRSIFLSIMDGEESLRQYSPEVLVQDPNTRHAVSLLPPIILFHGTADYSIPADASKNFA 397
+Y ++ + E++L Y ++ V L L HGTAD ++ S +
Sbjct: 633 VYTERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYL----LIHGTADDNVHFQQSAQIS 688
Query: 398 NTLQRVGVRAESILYEGKTH 417
L VGV +++ Y + H
Sbjct: 689 KALVDVGVDFQAMWYTDEDH 708
>pdb|3CCB|A Chain A, Crystal Structure Of Human Dpp4 In Complex With A
Benzimidazole Derivative
pdb|3CCB|B Chain B, Crystal Structure Of Human Dpp4 In Complex With A
Benzimidazole Derivative
pdb|3CCB|C Chain C, Crystal Structure Of Human Dpp4 In Complex With A
Benzimidazole Derivative
pdb|3CCB|D Chain D, Crystal Structure Of Human Dpp4 In Complex With A
Benzimidazole Derivative
pdb|3CCC|A Chain A, Crystal Structure Of Human Dpp4 In Complex With A
Benzimidazole Derivative
pdb|3CCC|B Chain B, Crystal Structure Of Human Dpp4 In Complex With A
Benzimidazole Derivative
pdb|3CCC|C Chain C, Crystal Structure Of Human Dpp4 In Complex With A
Benzimidazole Derivative
pdb|3CCC|D Chain D, Crystal Structure Of Human Dpp4 In Complex With A
Benzimidazole Derivative
pdb|3G0B|A Chain A, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With Tak-322
pdb|3G0B|B Chain B, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With Tak-322
pdb|3G0B|C Chain C, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With Tak-322
pdb|3G0B|D Chain D, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With Tak-322
pdb|3G0C|A Chain A, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With A Pyrimidinedione Inhibitor 1
pdb|3G0C|B Chain B, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With A Pyrimidinedione Inhibitor 1
pdb|3G0C|C Chain C, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With A Pyrimidinedione Inhibitor 1
pdb|3G0C|D Chain D, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With A Pyrimidinedione Inhibitor 1
pdb|3G0D|A Chain A, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With A Pyrimidinedione Inhibitor 2
pdb|3G0D|B Chain B, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With A Pyrimidinedione Inhibitor 2
pdb|3G0D|C Chain C, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With A Pyrimidinedione Inhibitor 2
pdb|3G0D|D Chain D, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With A Pyrimidinedione Inhibitor 2
pdb|3G0G|A Chain A, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With A Pyrimidinone Inhibitor 3
pdb|3G0G|B Chain B, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With A Pyrimidinone Inhibitor 3
pdb|3G0G|C Chain C, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With A Pyrimidinone Inhibitor 3
pdb|3G0G|D Chain D, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With A Pyrimidinone Inhibitor 3
pdb|3O95|A Chain A, Crystal Structure Of Human Dpp4 Bound To Tak-100
pdb|3O95|B Chain B, Crystal Structure Of Human Dpp4 Bound To Tak-100
pdb|3O95|C Chain C, Crystal Structure Of Human Dpp4 Bound To Tak-100
pdb|3O95|D Chain D, Crystal Structure Of Human Dpp4 Bound To Tak-100
pdb|3O9V|A Chain A, Crystal Structure Of Human Dpp4 Bound To Tak-986
pdb|3O9V|B Chain B, Crystal Structure Of Human Dpp4 Bound To Tak-986
pdb|3O9V|C Chain C, Crystal Structure Of Human Dpp4 Bound To Tak-986
pdb|3O9V|D Chain D, Crystal Structure Of Human Dpp4 Bound To Tak-986
pdb|3OPM|A Chain A, Crystal Structure Of Human Dpp4 Bound To Tak-294
pdb|3OPM|B Chain B, Crystal Structure Of Human Dpp4 Bound To Tak-294
pdb|3OPM|C Chain C, Crystal Structure Of Human Dpp4 Bound To Tak-294
pdb|3OPM|D Chain D, Crystal Structure Of Human Dpp4 Bound To Tak-294
pdb|4G1F|A Chain A, Crystal Structure Of Human Dipeptidyl Peptidase Iv In
Complex With A Pyridopyrimidinedione Analogue
pdb|4G1F|B Chain B, Crystal Structure Of Human Dipeptidyl Peptidase Iv In
Complex With A Pyridopyrimidinedione Analogue
pdb|4G1F|C Chain C, Crystal Structure Of Human Dipeptidyl Peptidase Iv In
Complex With A Pyridopyrimidinedione Analogue
pdb|4G1F|D Chain D, Crystal Structure Of Human Dipeptidyl Peptidase Iv In
Complex With A Pyridopyrimidinedione Analogue
Length = 740
Score = 28.5 bits (62), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Query: 338 LYRSIFLSIMDGEESLRQYSPEVLVQDPNTRHAVSLLPPIILFHGTADYSIPADASKNFA 397
+Y ++ + E++L Y ++ V L L HGTAD ++ S +
Sbjct: 639 VYTERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYL----LIHGTADDNVHFQQSAQIS 694
Query: 398 NTLQRVGVRAESILYEGKTH 417
L VGV +++ Y + H
Sbjct: 695 KALVDVGVDFQAMWYTDEDH 714
>pdb|1R9N|A Chain A, Crystal Structure Of Human Dipeptidyl Peptidase Iv In
Complex With A Decapeptide (Tnpy) At 2.3 Ang. Resolution
pdb|1R9N|B Chain B, Crystal Structure Of Human Dipeptidyl Peptidase Iv In
Complex With A Decapeptide (Tnpy) At 2.3 Ang. Resolution
pdb|1R9N|C Chain C, Crystal Structure Of Human Dipeptidyl Peptidase Iv In
Complex With A Decapeptide (Tnpy) At 2.3 Ang. Resolution
pdb|1R9N|D Chain D, Crystal Structure Of Human Dipeptidyl Peptidase Iv In
Complex With A Decapeptide (Tnpy) At 2.3 Ang. Resolution
Length = 739
Score = 28.1 bits (61), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Query: 338 LYRSIFLSIMDGEESLRQYSPEVLVQDPNTRHAVSLLPPIILFHGTADYSIPADASKNFA 397
+Y ++ + E++L Y ++ V L L HGTAD ++ S +
Sbjct: 638 VYTERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYL----LIHGTADDNVHFQQSAQIS 693
Query: 398 NTLQRVGVRAESILYEGKTH 417
L VGV +++ Y + H
Sbjct: 694 KALVDVGVDFQAMWYTDEDH 713
>pdb|2QJR|A Chain A, Dipepdyl Peptidase Iv In Complex With Inhibitor Pzf
pdb|2QJR|B Chain B, Dipepdyl Peptidase Iv In Complex With Inhibitor Pzf
pdb|3F8S|A Chain A, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With Inhibitor
pdb|3F8S|B Chain B, Crystal Structure Of Dipeptidyl Peptidase Iv In Complex
With Inhibitor
Length = 748
Score = 28.1 bits (61), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Query: 338 LYRSIFLSIMDGEESLRQYSPEVLVQDPNTRHAVSLLPPIILFHGTADYSIPADASKNFA 397
+Y ++ + E++L Y ++ V L L HGTAD ++ S +
Sbjct: 635 VYTERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYL----LIHGTADDNVHFQQSAQIS 690
Query: 398 NTLQRVGVRAESILYEGKTH 417
L VGV +++ Y + H
Sbjct: 691 KALVDVGVDFQAMWYTDEDH 710
>pdb|1U8E|A Chain A, Human Dipeptidyl Peptidase IvCD26 MUTANT Y547F
pdb|1U8E|B Chain B, Human Dipeptidyl Peptidase IvCD26 MUTANT Y547F
Length = 728
Score = 28.1 bits (61), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Query: 338 LYRSIFLSIMDGEESLRQYSPEVLVQDPNTRHAVSLLPPIILFHGTADYSIPADASKNFA 397
+Y ++ + E++L Y ++ V L L HGTAD ++ S +
Sbjct: 627 VYTERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYL----LIHGTADDNVHFQQSAQIS 682
Query: 398 NTLQRVGVRAESILYEGKTH 417
L VGV +++ Y + H
Sbjct: 683 KALVDVGVDFQAMWYTDEDH 702
>pdb|1PFQ|A Chain A, Crystal Structure Of Human Apo Dipeptidyl Peptidase Iv /
Cd26
pdb|1PFQ|B Chain B, Crystal Structure Of Human Apo Dipeptidyl Peptidase Iv /
Cd26
Length = 731
Score = 28.1 bits (61), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Query: 338 LYRSIFLSIMDGEESLRQYSPEVLVQDPNTRHAVSLLPPIILFHGTADYSIPADASKNFA 397
+Y ++ + E++L Y ++ V L L HGTAD ++ S +
Sbjct: 630 VYTERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYL----LIHGTADDNVHFQQSAQIS 685
Query: 398 NTLQRVGVRAESILYEGKTH 417
L VGV +++ Y + H
Sbjct: 686 KALVDVGVDFQAMWYTDEDH 705
>pdb|2QT9|A Chain A, Human Dipeptidyl Peptidase IvCD26 IN COMPLEX WITH A 4-Aryl
Cyclohexylalanine Inhibitor
pdb|2QT9|B Chain B, Human Dipeptidyl Peptidase IvCD26 IN COMPLEX WITH A 4-Aryl
Cyclohexylalanine Inhibitor
pdb|2QTB|A Chain A, Human Dipeptidyl Peptidase IvCD26 IN COMPLEX WITH A 4-Aryl
Cyclohexylalanine Inhibitor
pdb|2QTB|B Chain B, Human Dipeptidyl Peptidase IvCD26 IN COMPLEX WITH A 4-Aryl
Cyclohexylalanine Inhibitor
Length = 766
Score = 28.1 bits (61), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 34/81 (41%), Gaps = 4/81 (4%)
Query: 337 GLYRSIFLSIMDGEESLRQYSPEVLVQDPNTRHAVSLLPPIILFHGTADYSIPADASKNF 396
+Y ++ + E++L Y ++ V L L HGTAD ++ S
Sbjct: 664 SVYTERYMGLPTPEDNLDHYRNSTVMSRAENFKQVEYL----LIHGTADDNVHFQQSAQI 719
Query: 397 ANTLQRVGVRAESILYEGKTH 417
+ L VGV +++ Y + H
Sbjct: 720 SKALVDVGVDFQAMWYTDEDH 740
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.138 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,690,650
Number of Sequences: 62578
Number of extensions: 557126
Number of successful extensions: 1368
Number of sequences better than 100.0: 139
Number of HSP's better than 100.0 without gapping: 88
Number of HSP's successfully gapped in prelim test: 51
Number of HSP's that attempted gapping in prelim test: 1248
Number of HSP's gapped (non-prelim): 144
length of query: 476
length of database: 14,973,337
effective HSP length: 102
effective length of query: 374
effective length of database: 8,590,381
effective search space: 3212802494
effective search space used: 3212802494
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)