BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 011867
(476 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q54GB2|CTSL2_DICDI CTD small phosphatase-like protein 2 OS=Dictyostelium discoideum
GN=ctdspl2 PE=3 SV=1
Length = 567
Score = 228 bits (581), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 106/204 (51%), Positives = 148/204 (72%), Gaps = 3/204 (1%)
Query: 271 FDPQLFIRNFLDLSDMDPDLLPALVPKETERKRVTLVLDLDETLVHSSTEPCDDADFTFQ 330
F+P LFI+ + + M P + AL PKE +++LVLDLDETLVH STEP + TF
Sbjct: 360 FNPFLFIKQLANATTMPPPV--ALPPKEHSSPKISLVLDLDETLVHCSTEPLEQPHLTFP 417
Query: 331 VFFNMKEHTVYVRQRPFLRTFLERVAEMFEIIVFTASESVYAEKLLDILDPDRMLIARRA 390
VFFN E+ V+ ++RPF FL +V+++FE+I+FTAS+ VYA KLL+++DP+ I R
Sbjct: 418 VFFNNTEYQVFAKKRPFFEEFLHKVSDIFEVIIFTASQEVYANKLLNMIDPNNK-IKYRL 476
Query: 391 YRESCIFSDGSYAKDLTILGVDLARIAIIDNSPQVFRLQLDNGIPIKSWFDDPSDCALIS 450
YR+SC++ DG+Y KDL++LG DL ++ IIDNSPQ F Q+DNGIPI+SWF+D +D L+
Sbjct: 477 YRDSCVYVDGNYLKDLSVLGRDLKQVVIIDNSPQSFGFQVDNGIPIESWFEDENDKELLQ 536
Query: 451 LLPFLETLAAADDVRPIIAEKFSI 474
L+PFLE+L +DVRP I +KF +
Sbjct: 537 LVPFLESLTNVEDVRPHIRDKFKL 560
>sp|Q05D32|CTSL2_HUMAN CTD small phosphatase-like protein 2 OS=Homo sapiens GN=CTDSPL2
PE=1 SV=2
Length = 466
Score = 214 bits (546), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 117/257 (45%), Positives = 159/257 (61%), Gaps = 12/257 (4%)
Query: 219 ALKEKAEMVDMNSAGLCQELTKNSDYSQSFLVSHYDQEVDVNSGNVDLDEVDFDPQLFIR 278
L+E E V+ + L +T +S YS + + Y+++ +V FDP FI+
Sbjct: 214 GLEEAEETVNRDIPPLTAPVTPDSGYSSAHAEATYEEDWEV-----------FDPYYFIK 262
Query: 279 NFLDLSDMDPDLLPALVPKETERKRVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEH 338
+ L++ + PAL K +LVLDLDETLVH S +DA TF V F +
Sbjct: 263 HVPPLTEEQLNRKPALPLKTRSTPEFSLVLDLDETLVHCSLNELEDAALTFPVLFQDVIY 322
Query: 339 TVYVRQRPFLRTFLERVAEMFEIIVFTASESVYAEKLLDILDPDRMLIARRAYRESCIFS 398
VYVR RPF R FLER+++M+EII+FTAS+ VYA+KLL+ILDP + L+ R +RE C+
Sbjct: 323 QVYVRLRPFFREFLERMSQMYEIILFTASKKVYADKLLNILDPKKQLVRHRLFREHCVCV 382
Query: 399 DGSYAKDLTILGVDLARIAIIDNSPQVFRLQLDNGIPIKSWFDDPSDCALISLLPFLETL 458
G+Y KDL ILG DL++ IIDNSPQ F QL NGIPI+SWF D +D L+ L+PFLE L
Sbjct: 383 QGNYIKDLNILGRDLSKTIIIDNSPQAFAYQLSNGIPIESWFMDKNDNELLKLIPFLEKL 442
Query: 459 AA-ADDVRPIIAEKFSI 474
+DVRP I ++F +
Sbjct: 443 VELNEDVRPHIRDRFRL 459
>sp|Q8BG15|CTSL2_MOUSE CTD small phosphatase-like protein 2 OS=Mus musculus GN=Ctdspl2
PE=1 SV=1
Length = 465
Score = 213 bits (543), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 117/257 (45%), Positives = 157/257 (61%), Gaps = 12/257 (4%)
Query: 219 ALKEKAEMVDMNSAGLCQELTKNSDYSQSFLVSHYDQEVDVNSGNVDLDEVDFDPQLFIR 278
L+E E V + L +T S YS + + Y+++ +V FDP FI+
Sbjct: 213 GLEEAEETVTRDIPPLTAPVTPESGYSSAHAEATYEEDWEV-----------FDPYYFIK 261
Query: 279 NFLDLSDMDPDLLPALVPKETERKRVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEH 338
+ L++ + PAL K +LVLDLDETLVH S +DA TF V F +
Sbjct: 262 HVPPLTEEQLNRKPALPLKTRSTPEFSLVLDLDETLVHCSLNELEDAALTFPVLFQDVIY 321
Query: 339 TVYVRQRPFLRTFLERVAEMFEIIVFTASESVYAEKLLDILDPDRMLIARRAYRESCIFS 398
VYVR RPF R FLER+++M+EII+FTAS+ VYA+KLL+ILDP + L+ R +RE C+
Sbjct: 322 QVYVRLRPFFREFLERMSQMYEIILFTASKKVYADKLLNILDPKKQLVRHRLFREHCVCV 381
Query: 399 DGSYAKDLTILGVDLARIAIIDNSPQVFRLQLDNGIPIKSWFDDPSDCALISLLPFLETL 458
G+Y KDL ILG DL++ IIDNSPQ F QL NGIPI+SWF D +D L+ L+PFLE L
Sbjct: 382 QGNYIKDLNILGRDLSKTIIIDNSPQAFAYQLSNGIPIESWFMDKNDNELLKLIPFLEKL 441
Query: 459 AA-ADDVRPIIAEKFSI 474
+DVRP I ++F +
Sbjct: 442 VELNEDVRPHIRDRFRL 458
>sp|Q5XIK8|CTSL2_RAT CTD small phosphatase-like protein 2 OS=Rattus norvegicus
GN=Ctdspl2 PE=2 SV=1
Length = 465
Score = 211 bits (538), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 116/257 (45%), Positives = 156/257 (60%), Gaps = 12/257 (4%)
Query: 219 ALKEKAEMVDMNSAGLCQELTKNSDYSQSFLVSHYDQEVDVNSGNVDLDEVDFDPQLFIR 278
L+E E V + L + S YS + + Y+++ +V FDP FI+
Sbjct: 213 GLEEAEETVTRDIPPLTAPVAPESGYSSAHAEATYEEDWEV-----------FDPYYFIK 261
Query: 279 NFLDLSDMDPDLLPALVPKETERKRVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEH 338
+ L++ + PAL K +LVLDLDETLVH S +DA TF V F +
Sbjct: 262 HVPPLTEEQLNRKPALPLKTRSTPEFSLVLDLDETLVHCSLNELEDAALTFPVLFQDVIY 321
Query: 339 TVYVRQRPFLRTFLERVAEMFEIIVFTASESVYAEKLLDILDPDRMLIARRAYRESCIFS 398
VYVR RPF R FLER+++M+EII+FTAS+ VYA+KLL+ILDP + L+ R +RE C+
Sbjct: 322 QVYVRLRPFFREFLERMSQMYEIILFTASKKVYADKLLNILDPKKQLVRHRLFREHCVCV 381
Query: 399 DGSYAKDLTILGVDLARIAIIDNSPQVFRLQLDNGIPIKSWFDDPSDCALISLLPFLETL 458
G+Y KDL ILG DL++ IIDNSPQ F QL NGIPI+SWF D +D L+ L+PFLE L
Sbjct: 382 QGNYIKDLNILGRDLSKTIIIDNSPQAFAYQLSNGIPIESWFMDKNDNELLKLIPFLEKL 441
Query: 459 AAA-DDVRPIIAEKFSI 474
+DVRP I ++F +
Sbjct: 442 VELNEDVRPHIRDRFRL 458
>sp|Q5F3Z7|CTSL2_CHICK CTD small phosphatase-like protein 2 OS=Gallus gallus GN=CTDSPL2
PE=2 SV=2
Length = 466
Score = 210 bits (535), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 115/257 (44%), Positives = 158/257 (61%), Gaps = 12/257 (4%)
Query: 219 ALKEKAEMVDMNSAGLCQELTKNSDYSQSFLVSHYDQEVDVNSGNVDLDEVDFDPQLFIR 278
L+E E D + L ++ +S YS + + Y+++ +V FDP FI+
Sbjct: 214 GLEEVEETNDRDLPPLTAPVSPDSGYSSAHAEATYEEDWEV-----------FDPYYFIK 262
Query: 279 NFLDLSDMDPDLLPALVPKETERKRVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEH 338
+ L++ + PAL K +LVLDLDETLVH S +DA TF V F +
Sbjct: 263 HVPPLTEEQLNRKPALPLKTRSTPEFSLVLDLDETLVHCSLNELEDAALTFPVLFQDVIY 322
Query: 339 TVYVRQRPFLRTFLERVAEMFEIIVFTASESVYAEKLLDILDPDRMLIARRAYRESCIFS 398
VYVR RPF R FLER+++++EII+FTAS+ VYA+KLL+ILDP + L+ R +RE C+
Sbjct: 323 QVYVRLRPFFREFLERMSQIYEIILFTASKKVYADKLLNILDPKKQLVRHRLFREHCVCV 382
Query: 399 DGSYAKDLTILGVDLARIAIIDNSPQVFRLQLDNGIPIKSWFDDPSDCALISLLPFLETL 458
G+Y KDL ILG DL++ IIDNSPQ F QL NGIPI+SWF D +D L+ L+PFLE L
Sbjct: 383 QGNYIKDLNILGRDLSKTIIIDNSPQAFAYQLSNGIPIESWFMDKNDNELLKLIPFLEKL 442
Query: 459 AA-ADDVRPIIAEKFSI 474
+DVRP I ++F +
Sbjct: 443 VELNEDVRPHIRDRFRL 459
>sp|A4QNX6|CTL2B_DANRE CTD small phosphatase-like protein 2-B OS=Danio rerio GN=ctdspl2b
PE=2 SV=1
Length = 460
Score = 205 bits (522), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 106/205 (51%), Positives = 136/205 (66%), Gaps = 1/205 (0%)
Query: 271 FDPQLFIRNFLDLSDMDPDLLPALVPKETERKRVTLVLDLDETLVHSSTEPCDDADFTFQ 330
FDP FI++ L++ PAL K +LVLDLDETLVH S DDA TF
Sbjct: 249 FDPYFFIKHVPPLTEEQLTRKPALPLKTRSTPEFSLVLDLDETLVHCSLNELDDAALTFP 308
Query: 331 VFFNMKEHTVYVRQRPFLRTFLERVAEMFEIIVFTASESVYAEKLLDILDPDRMLIARRA 390
V F + VYVR RPF R FLER+++++EII+FTAS+ VYA+KLL+ILDP + L+ R
Sbjct: 309 VLFQDVIYQVYVRLRPFFREFLERMSQIYEIILFTASKKVYADKLLNILDPRKQLVRHRL 368
Query: 391 YRESCIFSDGSYAKDLTILGVDLARIAIIDNSPQVFRLQLDNGIPIKSWFDDPSDCALIS 450
+RE C+ G+Y KDL ILG DL++ IIDNSPQ F QL NGIPI+SWF D +D L+
Sbjct: 369 FREHCVCVQGNYIKDLNILGRDLSKTIIIDNSPQAFAYQLSNGIPIESWFMDRNDSELLK 428
Query: 451 LLPFLETLAAA-DDVRPIIAEKFSI 474
L+PFLE L +DVRP + E+F +
Sbjct: 429 LVPFLEKLVELNEDVRPHVRERFRL 453
>sp|Q66KM5|CTSL2_XENTR CTD small phosphatase-like protein 2 OS=Xenopus tropicalis
GN=ctdspl2 PE=2 SV=1
Length = 466
Score = 205 bits (522), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 111/242 (45%), Positives = 151/242 (62%), Gaps = 12/242 (4%)
Query: 234 LCQELTKNSDYSQSFLVSHYDQEVDVNSGNVDLDEVDFDPQLFIRNFLDLSDMDPDLLPA 293
L ++ S YS + + Y+++ +V FDP FI++ L++ + PA
Sbjct: 229 LTAPVSPESGYSSAHAEAAYEEDWEV-----------FDPYYFIKHVPPLTEEQLNRKPA 277
Query: 294 LVPKETERKRVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLE 353
L K +LVLDLDETLVH S +DA TF V F + VYVR RPF R FLE
Sbjct: 278 LPLKTRSTPEFSLVLDLDETLVHCSLNELEDAALTFPVLFQDVIYQVYVRLRPFFREFLE 337
Query: 354 RVAEMFEIIVFTASESVYAEKLLDILDPDRMLIARRAYRESCIFSDGSYAKDLTILGVDL 413
R+++++EII+FTAS+ VYA+KLL+ILDP + L+ R +RE C+ G+Y KDL ILG DL
Sbjct: 338 RMSQIYEIILFTASKKVYADKLLNILDPKKRLVRHRLFREHCVCVQGNYIKDLNILGRDL 397
Query: 414 ARIAIIDNSPQVFRLQLDNGIPIKSWFDDPSDCALISLLPFLETLAAA-DDVRPIIAEKF 472
++ IIDNSPQ F QL NGIPI+SWF D +D L+ L+PFLE L +DVRP I ++F
Sbjct: 398 SKTIIIDNSPQAFAYQLSNGIPIESWFMDKNDKELLKLVPFLENLVELNEDVRPHIRDRF 457
Query: 473 SI 474
+
Sbjct: 458 RL 459
>sp|Q08BB5|CTL2A_DANRE CTD small phosphatase-like protein 2-A OS=Danio rerio GN=ctdspl2a
PE=2 SV=1
Length = 469
Score = 205 bits (521), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 108/214 (50%), Positives = 139/214 (64%), Gaps = 1/214 (0%)
Query: 262 GNVDLDEVDFDPQLFIRNFLDLSDMDPDLLPALVPKETERKRVTLVLDLDETLVHSSTEP 321
G + D FDP FI++ L++ PAL K +LVLDLDETLVH S
Sbjct: 249 GTYEEDWEVFDPYFFIKHVPPLTEEQLTRKPALPLKTRSTPEFSLVLDLDETLVHCSLNE 308
Query: 322 CDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVAEMFEIIVFTASESVYAEKLLDILDP 381
+DA TF V F + VYVR RPF R FLER+++++EII+FTAS+ VYA+KLL+ILDP
Sbjct: 309 LEDAALTFPVLFQDVIYQVYVRLRPFFREFLERMSQIYEIILFTASKKVYADKLLNILDP 368
Query: 382 DRMLIARRAYRESCIFSDGSYAKDLTILGVDLARIAIIDNSPQVFRLQLDNGIPIKSWFD 441
+ L+ R +RE C+ G+Y KDL ILG DL++ IIDNSPQ F QL NGIPI+SWF
Sbjct: 369 KKQLVRHRLFREHCVCVQGNYIKDLNILGRDLSKTVIIDNSPQAFAYQLSNGIPIESWFV 428
Query: 442 DPSDCALISLLPFLETLAAA-DDVRPIIAEKFSI 474
D +D L+ L+PFLE L +DVRP I E+F +
Sbjct: 429 DKNDNELLKLVPFLEKLVELNEDVRPYIRERFRL 462
>sp|Q801R4|CTL2A_XENLA CTD small phosphatase-like protein 2-A OS=Xenopus laevis
GN=ctdspl2-a PE=2 SV=1
Length = 466
Score = 205 bits (521), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 110/242 (45%), Positives = 151/242 (62%), Gaps = 12/242 (4%)
Query: 234 LCQELTKNSDYSQSFLVSHYDQEVDVNSGNVDLDEVDFDPQLFIRNFLDLSDMDPDLLPA 293
L ++ S YS + + Y+++ +V FDP FI++ L++ + PA
Sbjct: 229 LTAPVSPESGYSSAHAEAAYEEDWEV-----------FDPYFFIKHVPPLTEEQLNRKPA 277
Query: 294 LVPKETERKRVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLE 353
L K +LVLDLDETLVH S +DA TF V F + VYVR RPF R FLE
Sbjct: 278 LPLKTRSTPEFSLVLDLDETLVHCSLNELEDAALTFPVLFQDVIYQVYVRLRPFFREFLE 337
Query: 354 RVAEMFEIIVFTASESVYAEKLLDILDPDRMLIARRAYRESCIFSDGSYAKDLTILGVDL 413
R+++++EII+FTAS+ VYA+KLL+ILDP + L+ R +RE C+ G+Y KDL ILG DL
Sbjct: 338 RMSQIYEIILFTASKKVYADKLLNILDPKKRLVRHRLFREHCVCVQGNYIKDLNILGRDL 397
Query: 414 ARIAIIDNSPQVFRLQLDNGIPIKSWFDDPSDCALISLLPFLETLAAA-DDVRPIIAEKF 472
++ IIDNSPQ F QL NGIPI+SWF D +D L+ L+PFLE L +DVRP + ++F
Sbjct: 398 SKTIIIDNSPQAFAYQLSNGIPIESWFMDKNDKELLKLVPFLENLVELNEDVRPHVRDRF 457
Query: 473 SI 474
+
Sbjct: 458 RL 459
>sp|Q3KQB6|CTL2B_XENLA CTD small phosphatase-like protein 2-B OS=Xenopus laevis
GN=ctdspl2-b PE=2 SV=1
Length = 466
Score = 204 bits (520), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 110/242 (45%), Positives = 151/242 (62%), Gaps = 12/242 (4%)
Query: 234 LCQELTKNSDYSQSFLVSHYDQEVDVNSGNVDLDEVDFDPQLFIRNFLDLSDMDPDLLPA 293
L ++ S YS + + Y+++ +V FDP FI++ L++ + PA
Sbjct: 229 LTAPVSPESGYSSAHAEAAYEEDWEV-----------FDPYFFIKHVPPLTEEQLNRKPA 277
Query: 294 LVPKETERKRVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLE 353
L K +LVLDLDETLVH S +DA TF V F + VYVR RPF R FLE
Sbjct: 278 LPLKTRSTPEFSLVLDLDETLVHCSLNELEDAALTFPVLFQDVIYQVYVRLRPFFREFLE 337
Query: 354 RVAEMFEIIVFTASESVYAEKLLDILDPDRMLIARRAYRESCIFSDGSYAKDLTILGVDL 413
R+++++EII+FTAS+ VYA+KLL+ILDP + L+ R +RE C+ G+Y KDL ILG DL
Sbjct: 338 RMSQIYEIILFTASKKVYADKLLNILDPKKRLVRHRLFREHCVCVQGNYIKDLNILGRDL 397
Query: 414 ARIAIIDNSPQVFRLQLDNGIPIKSWFDDPSDCALISLLPFLETLAAA-DDVRPIIAEKF 472
++ IIDNSPQ F QL NGIPI+SWF D +D L+ L+PFL+ L +DVRP I ++F
Sbjct: 398 SKTIIIDNSPQAFAYQLSNGIPIESWFMDKNDKELLKLVPFLQKLVELNEDVRPHIRDRF 457
Query: 473 SI 474
+
Sbjct: 458 RL 459
>sp|Q9N4V4|SCPL3_CAEEL CTD small phosphatase-like protein 3 OS=Caenorhabditis elegans
GN=scpl-3 PE=3 SV=1
Length = 287
Score = 183 bits (464), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 100/209 (47%), Positives = 129/209 (61%), Gaps = 1/209 (0%)
Query: 268 EVDFDPQLFIRNFLDLSDMDPDLLPALVPKETERKRVTLVLDLDETLVHSSTEPCDDADF 327
+++D + + N L++ PAL K TLVLDLDETLVH S P D+A
Sbjct: 29 RLEYDALVMLANLPPLTEEIMSRCPALPVKTRSTPEYTLVLDLDETLVHCSLTPLDNATM 88
Query: 328 TFQVFFNMKEHTVYVRQRPFLRTFLERVAEMFEIIVFTASESVYAEKLLDILDPDRMLIA 387
F V F + VYVR RP LRTFL R+A+ FEII+FTAS+ VYA KL DILDP + I
Sbjct: 89 VFPVVFQNITYQVYVRLRPHLRTFLSRMAKTFEIIIFTASKKVYANKLCDILDPRKNHIR 148
Query: 388 RRAYRESCIFSDGSYAKDLTILGVDLARIAIIDNSPQVFRLQLDNGIPIKSWFDDPSDCA 447
R +RE C+ G+Y KDLTILG D ++ I+DN+ Q F QLDNGIPI+SWF D +D
Sbjct: 149 HRLFREHCVCVFGNYVKDLTILGRDPSKTMILDNAVQSFAYQLDNGIPIESWFHDRNDTE 208
Query: 448 LISLLPFLETLAA-ADDVRPIIAEKFSIK 475
L+ L FLE + DVR I+ K+ ++
Sbjct: 209 LLKLCSFLEAIPTLGRDVREILRHKYRLR 237
>sp|O14595|CTDS2_HUMAN Carboxy-terminal domain RNA polymerase II polypeptide A small
phosphatase 2 OS=Homo sapiens GN=CTDSP2 PE=1 SV=2
Length = 271
Score = 156 bits (395), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 78/173 (45%), Positives = 116/173 (67%), Gaps = 3/173 (1%)
Query: 294 LVPKETE--RKRVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTF 351
L+P+ TE + R+ +V+DLDETLVHSS +P ++ADF + H VYV +RP++ F
Sbjct: 90 LLPEVTEEDQGRICVVIDLDETLVHSSFKPINNADFIVPIEIEGTTHQVYVLKRPYVDEF 149
Query: 352 LERVAEMFEIIVFTASESVYAEKLLDILDPDRMLIARRAYRESCIFSDGSYAKDLTILGV 411
L R+ E+FE ++FTAS + YA+ + D+LD + AR +RESC+F G Y KDL+ LG
Sbjct: 150 LRRMGELFECVLFTASLAKYADPVTDLLDRCGVFRAR-LFRESCVFHQGCYVKDLSRLGR 208
Query: 412 DLARIAIIDNSPQVFRLQLDNGIPIKSWFDDPSDCALISLLPFLETLAAADDV 464
DL + I+DNSP + +N +P++SWFDD +D L++L+P E L+ A+DV
Sbjct: 209 DLRKTLILDNSPASYIFHPENAVPVQSWFDDMADTELLNLIPIFEELSGAEDV 261
>sp|Q8BX07|CTDS2_MOUSE Carboxy-terminal domain RNA polymerase II polypeptide A small
phosphatase 2 OS=Mus musculus GN=Ctdsp2 PE=2 SV=1
Length = 270
Score = 156 bits (394), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 78/173 (45%), Positives = 115/173 (66%), Gaps = 3/173 (1%)
Query: 294 LVPKETER--KRVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTF 351
L+P+ TE+ R+ +V+DLDETLVHSS +P ++ADF V H VYV +RP++ F
Sbjct: 89 LLPEVTEQDQGRICVVIDLDETLVHSSFKPINNADFIVPVEIEGTTHQVYVLKRPYVDEF 148
Query: 352 LERVAEMFEIIVFTASESVYAEKLLDILDPDRMLIARRAYRESCIFSDGSYAKDLTILGV 411
L R+ E+FE ++FTAS + YA+ + D+LD + AR +RE+C+F G Y KDL+ LG
Sbjct: 149 LRRMGELFECVLFTASLAKYADPVTDLLDRCGVFRAR-LFREACVFHQGCYVKDLSRLGR 207
Query: 412 DLARIAIIDNSPQVFRLQLDNGIPIKSWFDDPSDCALISLLPFLETLAAADDV 464
DL + I+DNSP + +N +P++SWFDD +D L++L+P E L+ DDV
Sbjct: 208 DLRKTVILDNSPASYIFHPENAVPVQSWFDDMADTELLNLIPVFEELSGTDDV 260
>sp|Q9GZU7|CTDS1_HUMAN Carboxy-terminal domain RNA polymerase II polypeptide A small
phosphatase 1 OS=Homo sapiens GN=CTDSP1 PE=1 SV=1
Length = 261
Score = 156 bits (394), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 113/174 (64%), Gaps = 1/174 (0%)
Query: 297 KETERKRVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVA 356
K + ++ +V+DLDETLVHSS +P ++ADF V + H VYV +RP + FL+R+
Sbjct: 84 KAQDSDKICVVIDLDETLVHSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMG 143
Query: 357 EMFEIIVFTASESVYAEKLLDILDPDRMLIARRAYRESCIFSDGSYAKDLTILGVDLARI 416
E+FE ++FTAS + YA+ + D+LD AR +RESC+F G+Y KDL+ LG DL R+
Sbjct: 144 ELFECVLFTASLAKYADPVADLLDKWGAFRAR-LFRESCVFHRGNYVKDLSRLGRDLRRV 202
Query: 417 AIIDNSPQVFRLQLDNGIPIKSWFDDPSDCALISLLPFLETLAAADDVRPIIAE 470
I+DNSP + DN +P+ SWFD+ SD L LLPF E L+ DDV ++ +
Sbjct: 203 LILDNSPASYVFHPDNAVPVASWFDNMSDTELHDLLPFFEQLSRVDDVYSVLRQ 256
>sp|P58466|CTDS1_MOUSE Carboxy-terminal domain RNA polymerase II polypeptide A small
phosphatase 1 OS=Mus musculus GN=Ctdsp1 PE=1 SV=1
Length = 261
Score = 155 bits (393), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 113/174 (64%), Gaps = 1/174 (0%)
Query: 297 KETERKRVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVA 356
K + ++ +V+DLDETLVHSS +P ++ADF V + H VYV +RP + FL+R+
Sbjct: 84 KAQDSDKICVVIDLDETLVHSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMG 143
Query: 357 EMFEIIVFTASESVYAEKLLDILDPDRMLIARRAYRESCIFSDGSYAKDLTILGVDLARI 416
E+FE ++FTAS + YA+ + D+LD AR +RESC+F G+Y KDL+ LG DL R+
Sbjct: 144 ELFECVLFTASLAKYADPVADLLDKWGAFRAR-LFRESCVFHRGNYVKDLSRLGRDLRRV 202
Query: 417 AIIDNSPQVFRLQLDNGIPIKSWFDDPSDCALISLLPFLETLAAADDVRPIIAE 470
I+DNSP + DN +P+ SWFD+ SD L LLPF E L+ DDV ++ +
Sbjct: 203 LILDNSPASYVFHPDNAVPVASWFDNMSDTELHDLLPFFEQLSRVDDVYSVLRQ 256
>sp|Q1RMV9|CNEP1_BOVIN CTD nuclear envelope phosphatase 1 OS=Bos taurus GN=CTDNEP1 PE=2
SV=1
Length = 244
Score = 154 bits (390), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/206 (41%), Positives = 118/206 (57%), Gaps = 13/206 (6%)
Query: 277 IRNFLDLSDMDPDLLPALVPKETER----KRVTLVLDLDETLVHS--------STEPCDD 324
IR + + D+LP L P R KR LVLDLDETL+HS + P
Sbjct: 32 IRTVIQYQTVRYDILP-LSPVSRNRLSQVKRKILVLDLDETLIHSHHDGVLRPTVRPGTP 90
Query: 325 ADFTFQVFFNMKEHTVYVRQRPFLRTFLERVAEMFEIIVFTASESVYAEKLLDILDPDRM 384
DF +V + +V +RP + FLE V++ +E++VFTAS +Y + D LD R
Sbjct: 91 PDFILKVVIDKHPVRFFVHKRPHVDFFLEVVSQWYELVVFTASMEIYGSAVADKLDNSRS 150
Query: 385 LIARRAYRESCIFSDGSYAKDLTILGVDLARIAIIDNSPQVFRLQLDNGIPIKSWFDDPS 444
++ RR YR+ C GSY KDL+++ DL+ I I+DNSP +R DN IPIKSWF DPS
Sbjct: 151 ILKRRYYRQHCTLELGSYIKDLSVVHSDLSSIVILDNSPGAYRSHPDNAIPIKSWFSDPS 210
Query: 445 DCALISLLPFLETLAAADDVRPIIAE 470
D AL++LLP L+ L DVR +++
Sbjct: 211 DTALLNLLPMLDALRFTADVRSVLSR 236
>sp|Q5U395|CNEPA_DANRE CTD nuclear envelope phosphatase 1A OS=Danio rerio GN=ctdnep1a PE=2
SV=1
Length = 245
Score = 154 bits (390), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/206 (41%), Positives = 119/206 (57%), Gaps = 13/206 (6%)
Query: 277 IRNFLDLSDMDPDLLPALVPKETER----KRVTLVLDLDETLVHS--------STEPCDD 324
+R + + D+LP L P R KR LVLDLDETL+HS + P
Sbjct: 33 LRTIIQYQTVRYDILP-LSPISRNRLNAVKRKILVLDLDETLIHSHHDGVLRPTVRPGTP 91
Query: 325 ADFTFQVFFNMKEHTVYVRQRPFLRTFLERVAEMFEIIVFTASESVYAEKLLDILDPDRM 384
DF +V + +V +RP + FLE V++ +E++VFTAS +Y + D LD +R
Sbjct: 92 PDFILKVVIDKHPVRFFVHKRPHVDFFLEVVSQWYELVVFTASMEIYGSAVADKLDNNRG 151
Query: 385 LIARRAYRESCIFSDGSYAKDLTILGVDLARIAIIDNSPQVFRLQLDNGIPIKSWFDDPS 444
++ RR YR+ C GSY KDL+++ DL+ I I+DNSP +R DN IPIKSWF DPS
Sbjct: 152 ILKRRYYRQHCTLDLGSYIKDLSVVHSDLSSIVILDNSPGAYRSHPDNAIPIKSWFSDPS 211
Query: 445 DCALISLLPFLETLAAADDVRPIIAE 470
D AL++LLP L+ L DVR +++
Sbjct: 212 DTALLNLLPMLDALRFTSDVRSVLSR 237
>sp|O95476|CNEP1_HUMAN CTD nuclear envelope phosphatase 1 OS=Homo sapiens GN=CTDNEP1 PE=1
SV=2
Length = 244
Score = 154 bits (390), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/206 (41%), Positives = 118/206 (57%), Gaps = 13/206 (6%)
Query: 277 IRNFLDLSDMDPDLLPALVPKETER----KRVTLVLDLDETLVHS--------STEPCDD 324
IR + + D+LP L P R KR LVLDLDETL+HS + P
Sbjct: 32 IRTVIQYQTVRYDILP-LSPVSRNRLAQVKRKILVLDLDETLIHSHHDGVLRPTVRPGTP 90
Query: 325 ADFTFQVFFNMKEHTVYVRQRPFLRTFLERVAEMFEIIVFTASESVYAEKLLDILDPDRM 384
DF +V + +V +RP + FLE V++ +E++VFTAS +Y + D LD R
Sbjct: 91 PDFILKVVIDKHPVRFFVHKRPHVDFFLEVVSQWYELVVFTASMEIYGSAVADKLDNSRS 150
Query: 385 LIARRAYRESCIFSDGSYAKDLTILGVDLARIAIIDNSPQVFRLQLDNGIPIKSWFDDPS 444
++ RR YR+ C GSY KDL+++ DL+ I I+DNSP +R DN IPIKSWF DPS
Sbjct: 151 ILKRRYYRQHCTLELGSYIKDLSVVHSDLSSIVILDNSPGAYRSHPDNAIPIKSWFSDPS 210
Query: 445 DCALISLLPFLETLAAADDVRPIIAE 470
D AL++LLP L+ L DVR +++
Sbjct: 211 DTALLNLLPMLDALRFTADVRSVLSR 236
>sp|Q3B7T6|CNEP1_RAT CTD nuclear envelope phosphatase 1 OS=Rattus norvegicus GN=Ctdnep1
PE=2 SV=2
Length = 244
Score = 154 bits (389), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/206 (41%), Positives = 118/206 (57%), Gaps = 13/206 (6%)
Query: 277 IRNFLDLSDMDPDLLPALVPKETER----KRVTLVLDLDETLVHS--------STEPCDD 324
IR + + D+LP L P R KR LVLDLDETL+HS + P
Sbjct: 32 IRTVIQYQTVRYDILP-LSPLSRNRLAQVKRKILVLDLDETLIHSHHDGVLRPTVRPGTP 90
Query: 325 ADFTFQVFFNMKEHTVYVRQRPFLRTFLERVAEMFEIIVFTASESVYAEKLLDILDPDRM 384
DF +V + +V +RP + FLE V++ +E++VFTAS +Y + D LD R
Sbjct: 91 PDFILKVVIDKHPVRFFVHKRPHVDFFLEVVSQWYELVVFTASMEIYGSAVADKLDNSRS 150
Query: 385 LIARRAYRESCIFSDGSYAKDLTILGVDLARIAIIDNSPQVFRLQLDNGIPIKSWFDDPS 444
++ RR YR+ C GSY KDL+++ DL+ I I+DNSP +R DN IPIKSWF DPS
Sbjct: 151 ILKRRYYRQHCTLELGSYIKDLSVVHSDLSSIVILDNSPGAYRSHPDNAIPIKSWFSDPS 210
Query: 445 DCALISLLPFLETLAAADDVRPIIAE 470
D AL++LLP L+ L DVR +++
Sbjct: 211 DTALLNLLPMLDALRFTADVRSVLSR 236
>sp|Q3TP92|CNEP1_MOUSE CTD nuclear envelope phosphatase 1 OS=Mus musculus GN=Ctdnep1 PE=2
SV=2
Length = 244
Score = 154 bits (389), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/206 (41%), Positives = 118/206 (57%), Gaps = 13/206 (6%)
Query: 277 IRNFLDLSDMDPDLLPALVPKETER----KRVTLVLDLDETLVHS--------STEPCDD 324
IR + + D+LP L P R KR LVLDLDETL+HS + P
Sbjct: 32 IRTVIQYQTVRYDILP-LSPLSRNRLAQVKRKILVLDLDETLIHSHHDGVLRPTVRPGTP 90
Query: 325 ADFTFQVFFNMKEHTVYVRQRPFLRTFLERVAEMFEIIVFTASESVYAEKLLDILDPDRM 384
DF +V + +V +RP + FLE V++ +E++VFTAS +Y + D LD R
Sbjct: 91 PDFILKVVIDKHPVRFFVHKRPHVDFFLEVVSQWYELVVFTASMEIYGSAVADKLDNSRS 150
Query: 385 LIARRAYRESCIFSDGSYAKDLTILGVDLARIAIIDNSPQVFRLQLDNGIPIKSWFDDPS 444
++ RR YR+ C GSY KDL+++ DL+ I I+DNSP +R DN IPIKSWF DPS
Sbjct: 151 ILKRRYYRQHCTLELGSYIKDLSVVHSDLSSIVILDNSPGAYRSHPDNAIPIKSWFSDPS 210
Query: 445 DCALISLLPFLETLAAADDVRPIIAE 470
D AL++LLP L+ L DVR +++
Sbjct: 211 DTALLNLLPMLDALRFTADVRSVLSR 236
>sp|Q28HW9|CNEP1_XENTR CTD nuclear envelope phosphatase 1 OS=Xenopus tropicalis GN=ctdnep1
PE=2 SV=1
Length = 244
Score = 154 bits (389), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/206 (40%), Positives = 119/206 (57%), Gaps = 13/206 (6%)
Query: 277 IRNFLDLSDMDPDLLPALVPKETER----KRVTLVLDLDETLVHS--------STEPCDD 324
+R + + D+LP L P R KR LVLDLDETL+HS + P
Sbjct: 32 VRTIIQYQTVRYDVLP-LSPASRNRLSQVKRKVLVLDLDETLIHSHHDGVLRPTVRPGTP 90
Query: 325 ADFTFQVFFNMKEHTVYVRQRPFLRTFLERVAEMFEIIVFTASESVYAEKLLDILDPDRM 384
DF +V + +V +RP + FLE V++ +E++VFTAS +Y + D LD +R
Sbjct: 91 PDFILKVVIDKHPVRFFVHKRPHVDFFLEVVSQWYELVVFTASMEIYGSAVADKLDNNRG 150
Query: 385 LIARRAYRESCIFSDGSYAKDLTILGVDLARIAIIDNSPQVFRLQLDNGIPIKSWFDDPS 444
++ RR YR+ C GSY KDL+++ DL+ + I+DNSP +R DN IPIKSWF DPS
Sbjct: 151 VLRRRFYRQHCTLELGSYIKDLSVVHSDLSSVVILDNSPGAYRSHPDNAIPIKSWFSDPS 210
Query: 445 DCALISLLPFLETLAAADDVRPIIAE 470
D AL++LLP L+ L DVR +++
Sbjct: 211 DTALLNLLPMLDALRFTADVRSVLSR 236
>sp|Q9PTJ6|CTDSL_CHICK CTD small phosphatase-like protein OS=Gallus gallus GN=NFI1 PE=2
SV=2
Length = 275
Score = 152 bits (383), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 79/176 (44%), Positives = 117/176 (66%), Gaps = 5/176 (2%)
Query: 290 LLPALVPKETERKRVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLR 349
LLP L + +K V V+DLDETLVHSS +P +ADF V + H VYV +RP +
Sbjct: 94 LLPELTASDYGKKCV--VIDLDETLVHSSFKPISNADFIVPVEIDGTIHQVYVLKRPHVD 151
Query: 350 TFLERVAEMFEIIVFTASESVYAEKLLDILDPDRMLIAR-RAYRESCIFSDGSYAKDLTI 408
FL+R+ E+FE ++FTAS + YA+ + D+LD R + R R +RESC+F G+Y KDL+
Sbjct: 152 EFLQRMGELFECVLFTASLAKYADPVADLLD--RWGVFRARLFRESCVFHRGNYVKDLSR 209
Query: 409 LGVDLARIAIIDNSPQVFRLQLDNGIPIKSWFDDPSDCALISLLPFLETLAAADDV 464
LG +L+++ I+DNSP + +N +P++SWFDD +D L+ L+PF E L+ ++V
Sbjct: 210 LGRELSKVIIVDNSPASYIFHPENAVPVQSWFDDMTDTELLDLIPFFEGLSKEEEV 265
>sp|Q5U3T3|CNEPB_DANRE CTD nuclear envelope phosphatase 1B OS=Danio rerio GN=ctdnep1b PE=2
SV=1
Length = 245
Score = 151 bits (382), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 83/206 (40%), Positives = 119/206 (57%), Gaps = 13/206 (6%)
Query: 277 IRNFLDLSDMDPDLLPALVPKETER----KRVTLVLDLDETLVHS--------STEPCDD 324
IR + + D+L +L P R KR LVLDLDETL+HS + P
Sbjct: 33 IRTIIQYQTVRYDIL-SLSPISRNRLNNVKRKILVLDLDETLIHSHHDGVLRPTVRPGTP 91
Query: 325 ADFTFQVFFNMKEHTVYVRQRPFLRTFLERVAEMFEIIVFTASESVYAEKLLDILDPDRM 384
DF +V + +V +RP + FLE V++ +E++VFTAS +Y + D LD ++
Sbjct: 92 PDFILKVVIDKHPVRFFVHKRPHVDFFLEVVSQWYELVVFTASMEIYGSAVADKLDNNKA 151
Query: 385 LIARRAYRESCIFSDGSYAKDLTILGVDLARIAIIDNSPQVFRLQLDNGIPIKSWFDDPS 444
++ RR YR+ C GSY KDL+++ DL+ + I+DNSP +R DN IPIKSWF DPS
Sbjct: 152 ILKRRYYRQHCTLDSGSYIKDLSVVHDDLSSVVILDNSPGAYRSHPDNAIPIKSWFSDPS 211
Query: 445 DCALISLLPFLETLAAADDVRPIIAE 470
D AL++LLP L+ L DVR +++
Sbjct: 212 DTALLNLLPMLDALRFPADVRSVLSR 237
>sp|Q8JIL9|CNEP1_XENLA CTD nuclear envelope phosphatase 1 OS=Xenopus laevis GN=ctdnep1
PE=1 SV=1
Length = 244
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/205 (40%), Positives = 118/205 (57%), Gaps = 13/205 (6%)
Query: 278 RNFLDLSDMDPDLLPALVPKETER----KRVTLVLDLDETLVHS--------STEPCDDA 325
R + + D+LP L P R KR LVLDLDETL+HS + P
Sbjct: 33 RTIIQYQTVRYDVLP-LSPASRNRLSQVKRKVLVLDLDETLIHSHHDGVLRPTVRPGTPP 91
Query: 326 DFTFQVFFNMKEHTVYVRQRPFLRTFLERVAEMFEIIVFTASESVYAEKLLDILDPDRML 385
DF +V + +V +RP + FLE V++ +E++VFTAS +Y + D LD ++ +
Sbjct: 92 DFILKVVIDKHPVRFFVHKRPHVDFFLEVVSQWYELVVFTASMEIYGSAVADKLDNNKGV 151
Query: 386 IARRAYRESCIFSDGSYAKDLTILGVDLARIAIIDNSPQVFRLQLDNGIPIKSWFDDPSD 445
+ RR YR+ C GSY KDL+++ DL+ + I+DNSP +R DN IPIKSWF DPSD
Sbjct: 152 LRRRFYRQHCTLELGSYIKDLSVVHSDLSSVVILDNSPGAYRSHPDNAIPIKSWFSDPSD 211
Query: 446 CALISLLPFLETLAAADDVRPIIAE 470
AL++LLP L+ L DVR +++
Sbjct: 212 TALLNLLPMLDALRFTADVRSVLSR 236
>sp|O15194|CTDSL_HUMAN CTD small phosphatase-like protein OS=Homo sapiens GN=CTDSPL PE=1
SV=2
Length = 276
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 117/176 (66%), Gaps = 5/176 (2%)
Query: 290 LLPALVPKETERKRVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLR 349
LLP + + +K +V+DLDETLVHSS +P +ADF V + H VYV +RP +
Sbjct: 95 LLPEVTVLDYGKK--CVVIDLDETLVHSSFKPISNADFIVPVEIDGTIHQVYVLKRPHVD 152
Query: 350 TFLERVAEMFEIIVFTASESVYAEKLLDILDPDRMLIAR-RAYRESCIFSDGSYAKDLTI 408
FL+R+ ++FE ++FTAS + YA+ + D+LD R + R R +RESC+F G+Y KDL+
Sbjct: 153 EFLQRMGQLFECVLFTASLAKYADPVADLLD--RWGVFRARLFRESCVFHRGNYVKDLSR 210
Query: 409 LGVDLARIAIIDNSPQVFRLQLDNGIPIKSWFDDPSDCALISLLPFLETLAAADDV 464
LG +L+++ I+DNSP + +N +P++SWFDD +D L+ L+PF E L+ DDV
Sbjct: 211 LGRELSKVIIVDNSPASYIFHPENAVPVQSWFDDMTDTELLDLIPFFEGLSREDDV 266
>sp|P58465|CTDSL_MOUSE CTD small phosphatase-like protein OS=Mus musculus GN=Ctdspl PE=2
SV=3
Length = 276
Score = 150 bits (378), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 74/160 (46%), Positives = 110/160 (68%), Gaps = 3/160 (1%)
Query: 306 LVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVAEMFEIIVFT 365
+V+DLDETLVHSS +P +ADF V + H VYV +RP + FL+R+ ++FE ++FT
Sbjct: 109 VVIDLDETLVHSSFKPISNADFIVPVEIDGTIHQVYVLKRPHVDEFLQRMGQLFECVLFT 168
Query: 366 ASESVYAEKLLDILDPDRMLIAR-RAYRESCIFSDGSYAKDLTILGVDLARIAIIDNSPQ 424
AS + YA+ + D+LD R + R R +RESC+F G+Y KDL+ LG +L+++ I+DNSP
Sbjct: 169 ASLAKYADPVADLLD--RWGVFRARLFRESCVFHRGNYVKDLSRLGRELSKVIIVDNSPA 226
Query: 425 VFRLQLDNGIPIKSWFDDPSDCALISLLPFLETLAAADDV 464
+ +N +P++SWFDD +D L+ L+PF E L+ DDV
Sbjct: 227 SYIFHPENAVPVQSWFDDMTDTELLDLIPFFEGLSREDDV 266
>sp|Q29I63|CNEP1_DROPS CTD nuclear envelope phosphatase 1 homolog OS=Drosophila
pseudoobscura pseudoobscura GN=l(1)G0269 PE=3 SV=1
Length = 243
Score = 149 bits (377), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 85/210 (40%), Positives = 121/210 (57%), Gaps = 13/210 (6%)
Query: 277 IRNFLDLSDMDPDLLPALVPKETER----KRVTLVLDLDETLVHS--------STEPCDD 324
+R F+ + +L P L P R +R TLVLDLDETL+HS + +P
Sbjct: 31 VRAFIQYQPVKYELFP-LSPVSRHRLSLVQRKTLVLDLDETLIHSHHNAMPRNTVKPGTP 89
Query: 325 ADFTFQVFFNMKEHTVYVRQRPFLRTFLERVAEMFEIIVFTASESVYAEKLLDILDPDRM 384
DFT +V + +V +RP + FL+ V++ ++++VFTAS +Y + D LD R
Sbjct: 90 HDFTVKVTIDRNPVRFFVHKRPHVDYFLDVVSQWYDLVVFTASMEIYGAAVADKLDNGRN 149
Query: 385 LIARRAYRESCIFSDGSYAKDLTILGVDLARIAIIDNSPQVFRLQLDNGIPIKSWFDDPS 444
++ RR YR+ C GSY KDL+ + DL RI IIDNSP +R +N IPIKSWF DP
Sbjct: 150 ILRRRYYRQHCTPDYGSYTKDLSAICSDLNRIFIIDNSPGAYRCFPNNAIPIKSWFSDPM 209
Query: 445 DCALISLLPFLETLAAADDVRPIIAEKFSI 474
D AL+SLLP L+ L +DVR +++ +
Sbjct: 210 DTALLSLLPMLDALRFTNDVRSVLSRNLHL 239
>sp|Q9VRG7|CNEP1_DROME CTD nuclear envelope phosphatase 1 homolog OS=Drosophila
melanogaster GN=l(1)G0269 PE=2 SV=1
Length = 243
Score = 149 bits (377), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 85/210 (40%), Positives = 121/210 (57%), Gaps = 13/210 (6%)
Query: 277 IRNFLDLSDMDPDLLPALVPKETER----KRVTLVLDLDETLVHS--------STEPCDD 324
+R F+ + +L P L P R +R TLVLDLDETL+HS + +P
Sbjct: 31 VRAFIQYQPVKYELFP-LSPVSRHRLSLVQRKTLVLDLDETLIHSHHNAMPRNTVKPGTP 89
Query: 325 ADFTFQVFFNMKEHTVYVRQRPFLRTFLERVAEMFEIIVFTASESVYAEKLLDILDPDRM 384
DFT +V + +V +RP + FL+ V++ ++++VFTAS +Y + D LD R
Sbjct: 90 HDFTVKVTIDRNPVRFFVHKRPHVDYFLDVVSQWYDLVVFTASMEIYGAAVADKLDNGRN 149
Query: 385 LIARRAYRESCIFSDGSYAKDLTILGVDLARIAIIDNSPQVFRLQLDNGIPIKSWFDDPS 444
++ RR YR+ C GSY KDL+ + DL RI IIDNSP +R +N IPIKSWF DP
Sbjct: 150 ILRRRYYRQHCTPDYGSYTKDLSAICSDLNRIFIIDNSPGAYRCFPNNAIPIKSWFSDPM 209
Query: 445 DCALISLLPFLETLAAADDVRPIIAEKFSI 474
D AL+SLLP L+ L +DVR +++ +
Sbjct: 210 DTALLSLLPMLDALRFTNDVRSVLSRNLHL 239
>sp|Q07800|PSR1_YEAST Phosphatase PSR1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=PSR1 PE=1 SV=1
Length = 427
Score = 145 bits (366), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 74/163 (45%), Positives = 105/163 (64%), Gaps = 1/163 (0%)
Query: 298 ETERKRVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVAE 357
E+ + + L+LDLDETLVHSS + ADF V + + H VYV +RP + FLERV +
Sbjct: 252 ESTKGKKCLILDLDETLVHSSFKYLRSADFVLSVEIDDQVHNVYVIKRPGVEEFLERVGK 311
Query: 358 MFEIIVFTASESVYAEKLLDILDPDRMLIARRAYRESCIFSDGSYAKDLTILGVDLARIA 417
+FE++VFTAS S Y + LLDILD D+ +I R +RE+C +G+Y K+L+ +G L+ I
Sbjct: 312 LFEVVVFTASVSRYGDPLLDILDTDK-VIHHRLFREACYNYEGNYIKNLSQIGRPLSDII 370
Query: 418 IIDNSPQVFRLQLDNGIPIKSWFDDPSDCALISLLPFLETLAA 460
I+DNSP + + IPI SWF D D L+ ++P LE L+
Sbjct: 371 ILDNSPASYIFHPQHAIPISSWFSDTHDNELLDIIPLLEDLSV 413
>sp|Q07949|PSR2_YEAST Probable phosphatase PSR2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PSR2 PE=1 SV=1
Length = 397
Score = 145 bits (365), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 115/190 (60%), Gaps = 8/190 (4%)
Query: 280 FLDLSDMDPDLLPA------LVPKETE-RKRVTLVLDLDETLVHSSTEPCDDADFTFQVF 332
F DL+ + PD A L PK E +++ L+LDLDETLVHSS + ADF V
Sbjct: 197 FSDLTHLQPDQYHAPGYDTLLPPKLQEFQQKKCLILDLDETLVHSSFKYMHSADFVLPVE 256
Query: 333 FNMKEHTVYVRQRPFLRTFLERVAEMFEIIVFTASESVYAEKLLDILDPDRMLIARRAYR 392
+ + H VYV +RP + FL RV++++E++VFTAS S YA LLD LDP+ I R +R
Sbjct: 257 IDDQVHNVYVIKRPGVDEFLNRVSQLYEVVVFTASVSRYANPLLDTLDPNGT-IHHRLFR 315
Query: 393 ESCIFSDGSYAKDLTILGVDLARIAIIDNSPQVFRLQLDNGIPIKSWFDDPSDCALISLL 452
E+C +G+Y K+L+ +G L+ I+DNSP + + +PI SWF D D L+ ++
Sbjct: 316 EACYNYEGNYIKNLSQIGRPLSETIILDNSPASYIFHPQHAVPISSWFSDTHDNELLDII 375
Query: 453 PFLETLAAAD 462
P LE L++ +
Sbjct: 376 PLLEDLSSGN 385
>sp|Q61C05|CNEP1_CAEBR CTD nuclear envelope phosphatase 1 homolog OS=Caenorhabditis
briggsae GN=scpl-2 PE=3 SV=1
Length = 246
Score = 142 bits (359), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 108/191 (56%), Gaps = 12/191 (6%)
Query: 296 PKETER----KRVTLVLDLDETLVHS--------STEPCDDADFTFQVFFNMKEHTVYVR 343
P T R KR LVLDLDETL+HS + +P +DFT +V + V
Sbjct: 46 PLTTHRLLTVKRKILVLDLDETLIHSHHDGVLRQTVKPGTPSDFTIRVVIDRHPVKFSVH 105
Query: 344 QRPFLRTFLERVAEMFEIIVFTASESVYAEKLLDILDPDRMLIARRAYRESCIFSDGSYA 403
+RP + FL V++ +E++VFTAS VY + D LD R ++ RR +R+ C G Y
Sbjct: 106 ERPHVDYFLTVVSQWYELVVFTASMEVYGSSVADKLDRGRGILKRRYFRQHCTMEVGGYT 165
Query: 404 KDLTILGVDLARIAIIDNSPQVFRLQLDNGIPIKSWFDDPSDCALISLLPFLETLAAADD 463
KDL+ + DL+ I I+DNSP +R N IPI SWF DP+D L++LLPFL+ L D
Sbjct: 166 KDLSAIHPDLSSICILDNSPGAYRKFPHNAIPIPSWFSDPNDTCLLNLLPFLDALRFTSD 225
Query: 464 VRPIIAEKFSI 474
VR +++ +
Sbjct: 226 VRSVLSRNMQV 236
>sp|Q09695|YA22_SCHPO Uncharacterized protein C2F7.02c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC2F7.02c PE=1 SV=1
Length = 325
Score = 141 bits (356), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/179 (44%), Positives = 114/179 (63%), Gaps = 3/179 (1%)
Query: 290 LLPALVPKETERKRVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLR 349
LLP + KE E K+ L+LDLDETLVHSS + + ADF + + +H V V +RP +
Sbjct: 146 LLPPIA-KEDEGKKC-LILDLDETLVHSSFKYIEPADFVVSIEIDGLQHDVRVVKRPGVD 203
Query: 350 TFLERVAEMFEIIVFTASESVYAEKLLDILDPDRMLIARRAYRESCIFSDGSYAKDLTIL 409
FL+++ +MFEI+VFTAS + YA+ +LD+LD +I R +RE+C +G++ KDL+ L
Sbjct: 204 EFLKKMGDMFEIVVFTASLAKYADPVLDMLD-HSHVIRHRLFREACCNYEGNFVKDLSQL 262
Query: 410 GVDLARIAIIDNSPQVFRLQLDNGIPIKSWFDDPSDCALISLLPFLETLAAADDVRPII 468
G +L IIDNSP + + +PI SWF+D D LI L+PFLE LA DV ++
Sbjct: 263 GRNLEDSIIIDNSPSSYIFHPSHAVPISSWFNDMHDMELIDLIPFLEHLARVPDVSTVL 321
>sp|Q20432|CNEP1_CAEEL CTD nuclear envelope phosphatase 1 homolog OS=Caenorhabditis
elegans GN=scpl-2 PE=3 SV=1
Length = 246
Score = 141 bits (355), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/187 (41%), Positives = 107/187 (57%), Gaps = 12/187 (6%)
Query: 296 PKETER----KRVTLVLDLDETLVHS--------STEPCDDADFTFQVFFNMKEHTVYVR 343
P T R KR LVLDLDETL+HS + +P +DFT +V + V
Sbjct: 46 PLTTHRLLTVKRKILVLDLDETLIHSHHDGVLRQTVKPGTPSDFTIRVVIDRHPVKFSVH 105
Query: 344 QRPFLRTFLERVAEMFEIIVFTASESVYAEKLLDILDPDRMLIARRAYRESCIFSDGSYA 403
+RP + FL V++ +E++VFTAS VY + D LD R ++ RR +R+ C G Y
Sbjct: 106 ERPHVDYFLSVVSQWYELVVFTASMEVYGTSVADRLDRGRGILKRRYFRQHCTMEVGGYT 165
Query: 404 KDLTILGVDLARIAIIDNSPQVFRLQLDNGIPIKSWFDDPSDCALISLLPFLETLAAADD 463
KDL+ + DL+ I I+DNSP +R N IPI SWF DP+D L++LLPFL+ L D
Sbjct: 166 KDLSAIHPDLSSICILDNSPGAYRKFPHNAIPIPSWFSDPNDTCLLNLLPFLDALRFTSD 225
Query: 464 VRPIIAE 470
VR +++
Sbjct: 226 VRSVLSR 232
>sp|Q9XYL0|CTDS_DICDI Probable C-terminal domain small phosphatase OS=Dictyostelium
discoideum GN=fcpA PE=3 SV=1
Length = 306
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/151 (49%), Positives = 94/151 (62%), Gaps = 3/151 (1%)
Query: 290 LLPALVPKETERKRVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLR 349
L+ ++P+ K TLVLDLDETLVHSS +P + DF V H VYV +RPF+
Sbjct: 125 LMVPMIPRHVGLK--TLVLDLDETLVHSSFKPVHNPDFIVPVEIEGTIHQVYVVKRPFVD 182
Query: 350 TFLERVAEMFEIIVFTASESVYAEKLLDILDPDRMLIARRAYRESCIFSDGSYAKDLTIL 409
FL +AE FEI+VFTAS + YA+ +LD LD R+ I R +RESC G+Y KDL+ L
Sbjct: 183 DFLRAIAEKFEIVVFTASLAKYADPVLDFLDTGRV-IHYRLFRESCHNHKGNYVKDLSRL 241
Query: 410 GVDLARIAIIDNSPQVFRLQLDNGIPIKSWF 440
G DL I+DNSP + +N IPI SWF
Sbjct: 242 GRDLKSTIIVDNSPSSYLFHPENAIPIDSWF 272
>sp|O59718|NEM1_SCHPO Nuclear envelope morphology protein 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=nem1 PE=3 SV=1
Length = 476
Score = 136 bits (342), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 78/203 (38%), Positives = 115/203 (56%), Gaps = 9/203 (4%)
Query: 274 QLFIRNFLDLSDMDPD-LLPALVPKETERKRVTLVLDLDETLVHSSTEPCDDADFTFQVF 332
+L IRN +D P LL + +P++T LVLDLDETL+HS +
Sbjct: 279 RLRIRNITLCADKIPRPLLNSKLPRKT------LVLDLDETLIHSVSRGSRTTSGQPIEV 332
Query: 333 FNMKEHTV--YVRQRPFLRTFLERVAEMFEIIVFTASESVYAEKLLDILDPDRMLIARRA 390
EH + Y+ +RP L FL V++ F +I+FTAS YA+ ++D L+ D+ + A+R
Sbjct: 333 HVPGEHPILYYIHKRPHLDYFLSNVSQWFRLILFTASVQPYADPIIDYLERDKKIFAKRY 392
Query: 391 YRESCIFSDGSYAKDLTILGVDLARIAIIDNSPQVFRLQLDNGIPIKSWFDDPSDCALIS 450
YR+ C D S+ KD++I + L+RI IIDNSP + +N IPI+ W DPSD L++
Sbjct: 393 YRQHCALVDSSFVKDISICNIHLSRIMIIDNSPASYNAHKENAIPIEGWISDPSDVDLLN 452
Query: 451 LLPFLETLAAADDVRPIIAEKFS 473
LL FL L DVR ++ + +
Sbjct: 453 LLSFLHALQYVHDVRDLLGLRLA 475
>sp|P38757|NEM1_YEAST Nuclear envelope morphology protein 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=NEM1 PE=1 SV=1
Length = 446
Score = 117 bits (292), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 117/205 (57%), Gaps = 25/205 (12%)
Query: 290 LLPA-LVPKET--ERKRVTLVLDLDETLVHSSTEPCDDADFT----FQVFFNMKE-HTVY 341
L P L+PK +K+ LV+DLDETL+HS++ ++ + +V F + T+Y
Sbjct: 235 LFPKKLIPKSVLNTQKKKKLVIDLDETLIHSASRSTTHSNSSQGHLVEVKFGLSGIRTLY 294
Query: 342 -VRQRPFLRTFLERVAEMFEIIVFTASESVYAEKLLDILD---PDRMLIARRAYRESCIF 397
+ +RP+ FL +V++ +++I+FTAS YA+ ++D L+ P ++R YR C+
Sbjct: 295 FIHKRPYCDLFLTKVSKWYDLIIFTASMKEYADPVIDWLESSFPSSF--SKRYYRSDCVL 352
Query: 398 SDG-SYAKDLTIL----------GVDLARIAIIDNSPQVFRLQLDNGIPIKSWFDDPSDC 446
DG Y KDL+I+ L + IIDNSP + + +DN I ++ W DP+D
Sbjct: 353 RDGVGYIKDLSIVKDSEENGKGSSSSLDDVIIIDNSPVSYAMNVDNAIQVEGWISDPTDT 412
Query: 447 ALISLLPFLETLAAADDVRPIIAEK 471
L++LLPFLE + + DVR I+A K
Sbjct: 413 DLLNLLPFLEAMRYSTDVRNILALK 437
>sp|Q4WI16|TIM50_ASPFU Mitochondrial import inner membrane translocase subunit tim50
OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 /
CBS 101355 / FGSC A1100) GN=tim50 PE=3 SV=2
Length = 501
Score = 109 bits (273), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 102/182 (56%), Gaps = 20/182 (10%)
Query: 291 LPALVPKETE--RKRVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFL 348
P L+P E R+ TLVL L++ LVHS +EH + +RP +
Sbjct: 208 FPKLLPDEDPNLRQPYTLVLSLEDLLVHSEWS---------------REHGWRIAKRPGV 252
Query: 349 RTFLERVAEMFEIIVFTASESVYAEKLLDILDPDRMLIARRAYRESCIFSDGSYAKDLTI 408
FL + + +E+++FT+ S+ A+++L LDP R +I +RE+ + DG Y KDL+
Sbjct: 253 DYFLRYLNQYYELVLFTSVPSMMADQVLRKLDPYR-IIRWPLFREATRYKDGEYIKDLSY 311
Query: 409 LGVDLARIAIIDNSPQVFRLQLDNGIPIKSWFDDPSDCALISLLPFLETLA--AADDVRP 466
L DL+++ +ID + RLQ +N I + W DP D L++L+PFLE +A +DVRP
Sbjct: 312 LNRDLSKVILIDTKEEHARLQPENAIILDKWLGDPKDKNLVALIPFLEYIAGMGVEDVRP 371
Query: 467 II 468
++
Sbjct: 372 VL 373
>sp|Q6BVY9|TIM50_DEBHA Mitochondrial import inner membrane translocase subunit TIM50
OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 /
JCM 1990 / NBRC 0083 / IGC 2968) GN=TIM50 PE=3 SV=1
Length = 471
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 99/182 (54%), Gaps = 19/182 (10%)
Query: 289 DLLPALVPKETERKRVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFL 348
+LLP P E R+ +TLV+ LD+ L+HS D D +H +RP L
Sbjct: 176 NLLPPPAP-EAYRRPLTLVVTLDDLLIHS------DWD---------TKHGWRTGKRPGL 219
Query: 349 RTFLERVAEMFEIIVFTASESVYAEKLLDILDPDRMLIARRAYRESCIFSDGSYAKDLTI 408
FL +++ +EI++F ++ +Y+E + LDP ++ +RE+C + DG KDL++
Sbjct: 220 DYFLGYLSQYYEIVIFGSNYQMYSENTVGKLDPFHAYVSYALFREACRYKDGKLVKDLSL 279
Query: 409 LGVDLARIAIIDNSPQVFRLQLDNGIPIKSWFDDPSDCALISLLPFLETLAA--ADDVRP 466
L DL + +ID + +Q DN IP+K W D D L+ L+PFLE LA DVRP
Sbjct: 280 LNRDLGKTVLIDVEEDSWSMQPDNAIPMKPW-DGSYDDTLVKLIPFLEYLATQPVKDVRP 338
Query: 467 II 468
I+
Sbjct: 339 IL 340
>sp|Q5B4P0|TIM50_EMENI Mitochondrial import inner membrane translocase subunit tim50
OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 /
CBS 112.46 / NRRL 194 / M139) GN=tim50 PE=3 SV=1
Length = 532
Score = 106 bits (265), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 101/182 (55%), Gaps = 20/182 (10%)
Query: 291 LPALVPKETE--RKRVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFL 348
P L+P E R+ TLVL L++ LVHS +EH V +RP +
Sbjct: 237 FPKLLPDEDPNLRQPYTLVLSLEDLLVHSEWS---------------REHGWRVAKRPGV 281
Query: 349 RTFLERVAEMFEIIVFTASESVYAEKLLDILDPDRMLIARRAYRESCIFSDGSYAKDLTI 408
FL + + +E+++FT+ S+ A+++L LDP R +I +RE+ + DG Y KDL+
Sbjct: 282 DYFLRYLNQYYELVLFTSVPSMMADQVLRKLDPYR-IIRWPLFREATRYKDGEYIKDLSY 340
Query: 409 LGVDLARIAIIDNSPQVFRLQLDNGIPIKSWFDDPSDCALISLLPFLETLA--AADDVRP 466
L DL+++ +ID + RLQ +N I + W +P D L++L+PFLE LA DDVR
Sbjct: 341 LNRDLSKVILIDTKEEHARLQPENAIILDKWNGNPKDKTLVALIPFLEYLAGMGVDDVRT 400
Query: 467 II 468
++
Sbjct: 401 VL 402
>sp|Q6FRX4|TIM50_CANGA Mitochondrial import inner membrane translocase subunit TIM50
OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM
3761 / NBRC 0622 / NRRL Y-65) GN=TIM50 PE=3 SV=1
Length = 485
Score = 105 bits (263), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 96/167 (57%), Gaps = 18/167 (10%)
Query: 304 VTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVAEMFEIIV 363
+TLV+ L++ LVHS + ++H +RP FL +++ +EI++
Sbjct: 198 LTLVITLEDFLVHSEWD---------------QKHGWRTAKRPGADYFLGYLSQYYEIVL 242
Query: 364 FTASESVYAEKLLDILDPDRMLIARRAYRESCIFSDGSYAKDLTILGVDLARIAIIDNSP 423
F+++ +YAEK+ + +DP I+ ++E C++ DG + KDL+ L DL ++ IID
Sbjct: 243 FSSNYMMYAEKIAEKMDPIHAFISYNLFKEHCVYKDGVHIKDLSKLNRDLKKVMIIDTDE 302
Query: 424 QVFRLQLDNGIPIKSWFDDPSDCALISLLPFLETLAA--ADDVRPII 468
++LQ +N IP+ W D +D L+ L+PFLE +A +DVRPI+
Sbjct: 303 NSYKLQPENAIPMDPW-DGKADDKLLRLIPFLEYMATQQVEDVRPIL 348
>sp|Q59W44|TIM50_CANAL Mitochondrial import inner membrane translocase subunit TIM50
OS=Candida albicans (strain SC5314 / ATCC MYA-2876)
GN=TIM50 PE=3 SV=1
Length = 469
Score = 105 bits (262), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 96/173 (55%), Gaps = 18/173 (10%)
Query: 298 ETERKRVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVAE 357
E R+ +TLV+ LD+ L+HS+ + +H +RP L FL +++
Sbjct: 182 EQYRRPLTLVVTLDDFLIHSNWDT---------------QHGWRTGKRPGLDYFLGYLSQ 226
Query: 358 MFEIIVFTASESVYAEKLLDILDPDRMLIARRAYRESCIFSDGSYAKDLTILGVDLARIA 417
+EI+VF+++ +Y++K ++ LDP I+ +RE+C + DG KDL++L DL +
Sbjct: 227 YYEIVVFSSNSQIYSDKTVNKLDPYHAYISYALFREACRYKDGKLIKDLSLLNRDLGKTV 286
Query: 418 IIDNSPQVFRLQLDNGIPIKSWFDDPSDCALISLLPFLETLAA--ADDVRPII 468
+ID LQ +N I +K W P D LISL+PFLE LA DVRPI+
Sbjct: 287 MIDVDEDSAALQPENSIIVKKWEGQP-DEYLISLIPFLEYLATQPVKDVRPIL 338
>sp|Q02776|TIM50_YEAST Mitochondrial import inner membrane translocase subunit TIM50
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=TIM50 PE=1 SV=1
Length = 476
Score = 105 bits (261), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 96/166 (57%), Gaps = 18/166 (10%)
Query: 305 TLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVAEMFEIIVF 364
TLV+ L++ LVHS ++H +RP FL +++ +EI++F
Sbjct: 193 TLVITLEDFLVHSEWS---------------QKHGWRTAKRPGADYFLGYLSQYYEIVLF 237
Query: 365 TASESVYAEKLLDILDPDRMLIARRAYRESCIFSDGSYAKDLTILGVDLARIAIIDNSPQ 424
+++ +Y++K+ + LDP ++ ++E C++ DG + KDL+ L DL+++ IID P
Sbjct: 238 SSNYMMYSDKIAEKLDPIHAFVSYNLFKEHCVYKDGVHIKDLSKLNRDLSKVIIIDTDPN 297
Query: 425 VFRLQLDNGIPIKSWFDDPSDCALISLLPFLETLAA--ADDVRPII 468
++LQ +N IP++ W + +D L+ L+PFLE LA DVRPI+
Sbjct: 298 SYKLQPENAIPMEPW-NGEADDKLVRLIPFLEYLATQQTKDVRPIL 342
>sp|Q4PEW9|TIM50_USTMA Mitochondrial import inner membrane translocase subunit TIM50
OS=Ustilago maydis (strain 521 / FGSC 9021) GN=TIM50
PE=3 SV=1
Length = 493
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 92/181 (50%), Gaps = 18/181 (9%)
Query: 290 LLPALVPKETERKRVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLR 349
LLP +P R T+V+D+D+ LVHS +EH +RP L
Sbjct: 208 LLPDPLPFPYSRP-FTMVIDIDDLLVHSEWS---------------REHGWRTAKRPGLD 251
Query: 350 TFLERVAEMFEIIVFTASESVYAEKLLDILDPDRMLIARRAYRESCIFSDGSYAKDLTIL 409
FL +++ +EI++FT A +++ LDPDR I +RESC DG KDL L
Sbjct: 252 HFLGYLSQFYEIVLFTTQPFFTAGPIIEKLDPDRRFITYTLFRESCRTVDGKLVKDLNHL 311
Query: 410 GVDLARIAIIDNSPQVFRLQLDNGIPIKSWFDDPSDCALISLLPFLETLAA--ADDVRPI 467
DL+++ ++D +P F L +NGI +K W + D LI L+PF E + DDVR
Sbjct: 312 NRDLSKVVVVDTNPDSFHLHPENGILVKPWKGEREDRELIGLIPFFEAIGIYNIDDVRNT 371
Query: 468 I 468
I
Sbjct: 372 I 372
>sp|Q6CM45|TIM50_KLULA Mitochondrial import inner membrane translocase subunit TIM50
OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 /
DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=TIM50
PE=3 SV=1
Length = 480
Score = 102 bits (253), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 95/166 (57%), Gaps = 18/166 (10%)
Query: 305 TLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVAEMFEIIVF 364
TLVL L++ LVHS ++T Q + +RP + FL +++ +EI++F
Sbjct: 196 TLVLSLEDLLVHS--------EWTQQSGWR-------TAKRPGVDYFLGYLSQYYEIVLF 240
Query: 365 TASESVYAEKLLDILDPDRMLIARRAYRESCIFSDGSYAKDLTILGVDLARIAIIDNSPQ 424
+++ +YAEK+ + LDP I ++E C++ DG + KDL+ L DL ++ IID
Sbjct: 241 SSNYMMYAEKIAEKLDPIHAFITYNLFKEHCLYKDGVHIKDLSKLNRDLGKVLIIDTDEN 300
Query: 425 VFRLQLDNGIPIKSWFDDPSDCALISLLPFLETLAAAD--DVRPII 468
F+LQ +N I ++ W D +D L+ L+PFLE LA DVRPI+
Sbjct: 301 SFKLQPENAIYLEPW-DGKADDRLLRLIPFLEYLATQQVSDVRPIL 345
>sp|Q75A73|TIM50_ASHGO Mitochondrial import inner membrane translocase subunit TIM50
OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 /
FGSC 9923 / NRRL Y-1056) GN=TIM50 PE=3 SV=2
Length = 476
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 96/167 (57%), Gaps = 18/167 (10%)
Query: 304 VTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVAEMFEIIV 363
+TLVL L++ VHS ++T ++H +RP FL +++ +EI++
Sbjct: 191 LTLVLPLEDFFVHS--------EWT-------QQHGWRTAKRPGADYFLGYLSQYYEIVL 235
Query: 364 FTASESVYAEKLLDILDPDRMLIARRAYRESCIFSDGSYAKDLTILGVDLARIAIIDNSP 423
F+++ VY+EK+++ LDP R I +++ C++ DG + KDL+ L DL + IID P
Sbjct: 236 FSSNYMVYSEKVVEKLDPIRAFITYNLFKDHCVYKDGIHIKDLSHLNRDLGKTLIIDTDP 295
Query: 424 QVFRLQLDNGIPIKSWFDDPSDCALISLLPFLETLAAA--DDVRPII 468
+LQ++N I + W D +D AL+ +PFLE L +DVRPI+
Sbjct: 296 NSVKLQMENAILAEPW-DGKADDALLRYIPFLEYLVTQPINDVRPIL 341
>sp|O13636|TIM50_SCHPO Mitochondrial import inner membrane translocase subunit tim50
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=tim50 PE=3 SV=1
Length = 452
Score = 98.6 bits (244), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 97/181 (53%), Gaps = 18/181 (9%)
Query: 290 LLPALVPKETERKRVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLR 349
LLP +P+ R TLVL LD+ L+HS ++T ++H +RP L
Sbjct: 164 LLPDPLPEPYNRP-YTLVLSLDDLLIHS--------EWT-------RQHGWRTAKRPGLD 207
Query: 350 TFLERVAEMFEIIVFTASESVYAEKLLDILDPDRMLIARRAYRESCIFSDGSYAKDLTIL 409
FL ++ +E+++FT A+ ++D +DP + I+ RES + G KDL+ L
Sbjct: 208 YFLGYLSMYYEVVIFTRQYLATAKPIIDKIDPYHVSISAVLTRESSKYEKGKVIKDLSYL 267
Query: 410 GVDLARIAIIDNSPQVFRLQLDNGIPIKSWFDDPSDCALISLLPFLETLAAAD--DVRPI 467
DL+R+ +ID +P+ + Q DN I + W +P D L+ L+P LE +A D DVRP+
Sbjct: 268 NRDLSRVIMIDTNPESWSKQPDNAIAMAPWTGNPKDKELVGLIPLLEFIAIMDIKDVRPV 327
Query: 468 I 468
+
Sbjct: 328 L 328
>sp|Q6CDV7|TIM50_YARLI Mitochondrial import inner membrane translocase subunit TIM50
OS=Yarrowia lipolytica (strain CLIB 122 / E 150)
GN=TIM50 PE=3 SV=1
Length = 466
Score = 96.7 bits (239), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 91/183 (49%), Gaps = 18/183 (9%)
Query: 288 PDLLPALVPKETERKRVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPF 347
P LLP P ++ +TLV+ LD+ LVH +EH V +RP
Sbjct: 178 PVLLPD-PPAPPYQRPLTLVIALDDLLVHQEWS---------------REHGWRVAKRPG 221
Query: 348 LRTFLERVAEMFEIIVFTASESVYAEKLLDILDPDRMLIARRAYRESCIFSDGSYAKDLT 407
+ FL + + +EI++F++ EKL+ LDP + RE + DG KDL+
Sbjct: 222 VDYFLGYLGQYYEIVLFSSQYMANCEKLIMKLDPYHAWFSHVLTREHTTYEDGKLVKDLS 281
Query: 408 ILGVDLARIAIIDNSPQVFRLQLDNGIPIKSWFDDPSDCALISLLPFLETLAA--ADDVR 465
++ D+ +I IID Q +N IPI+ W P D L+ L+PFLE L + +DVR
Sbjct: 282 LMNRDMGKIIIIDPDTGCTMKQPENSIPIEPWKGTPGDKELVKLIPFLEWLVSQNVNDVR 341
Query: 466 PII 468
PI+
Sbjct: 342 PIL 344
>sp|Q874C1|TIM50_NEUCR Mitochondrial import inner membrane translocase subunit tim-50
OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A /
CBS 708.71 / DSM 1257 / FGSC 987) GN=tim-50 PE=1 SV=1
Length = 540
Score = 92.4 bits (228), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 91/166 (54%), Gaps = 18/166 (10%)
Query: 305 TLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVAEMFEIIVF 364
TL + L++ LVHS ++T ++H + +RP + FL +++ +EI++F
Sbjct: 250 TLCISLEDMLVHS--------EWT-------RDHGWRLAKRPGVDYFLRYLSQYYEIVLF 294
Query: 365 TASESVYAEKLLDILDPDRMLIARRAYRESCIFSDGSYAKDLTILGVDLARIAIIDNSPQ 424
T+ AE ++ +DP R I +RE+ + DG KDL+ L DL+++ IID P+
Sbjct: 295 TSVPFANAEPIVRKMDPYR-FIMWPLFREATKYKDGEIVKDLSYLNRDLSKVIIIDTDPK 353
Query: 425 VFRLQLDNGIPIKSWFDDPSDCALISLLPFLETLAAAD--DVRPII 468
R Q +N I + W DP D L+SL+PFLE + + DVR ++
Sbjct: 354 HVRAQPENAIVLPKWKGDPKDTELVSLVPFLEFIHTMNFPDVRKVL 399
>sp|Q4I099|TIM50_GIBZE Mitochondrial import inner membrane translocase subunit TIM50
OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC
9075 / NRRL 31084) GN=TIM50 PE=3 SV=1
Length = 525
Score = 92.0 bits (227), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 91/175 (52%), Gaps = 18/175 (10%)
Query: 296 PKETERKRVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERV 355
P T + TL L LD+ L+HS ++T +EH + +RP + F+ +
Sbjct: 230 PDPTFERPYTLCLSLDDLLIHS--------EWT-------REHGWRIAKRPGVDYFIRYL 274
Query: 356 AEMFEIIVFTASESVYAEKLLDILDPDRMLIARRAYRESCIFSDGSYAKDLTILGVDLAR 415
++ +E+++FT + E ++ LDP R LI YRE+ F DG KDL+ L DL++
Sbjct: 275 SQYYELVLFTTTPYATGEPVMRKLDPFR-LILWPLYREATKFEDGEIVKDLSYLNRDLSK 333
Query: 416 IAIIDNSPQVFRLQLDNGIPIKSWFDDPSDCALISLLPFLETLAAAD--DVRPII 468
+ IID + R Q DN I + W D D L++L+PFLE + DVR +I
Sbjct: 334 VIIIDTKAKHVRNQPDNAIILDPWKGDKDDKNLVNLIPFLEYIHTMQYSDVRKVI 388
>sp|Q3ZCQ8|TIM50_HUMAN Mitochondrial import inner membrane translocase subunit TIM50
OS=Homo sapiens GN=TIMM50 PE=1 SV=2
Length = 353
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 112/225 (49%), Gaps = 30/225 (13%)
Query: 257 VDVNSGNVDLDEVDFDPQLF------IRNFLDLSDM-----DPDLLPALVPKETERKRVT 305
VD N + DE D DP L + F D M P LLP + + + T
Sbjct: 91 VDENGAKIP-DEFDNDPILVQQLRRTYKYFKDYRQMIIEPTSPCLLPDPLQEPYYQPPYT 149
Query: 306 LVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVAEMFEIIVFT 365
LVL+L L+H +++ + K +RP + T +++A ++EI++FT
Sbjct: 150 LVLELTGVLLHP--------EWSLATGWRFK-------KRPGIETLFQQLAPLYEIVIFT 194
Query: 366 ASESVYAEKLLDILDPDRMLIARRAYRESCIFSDGSYAKDLTILGVDLARIAIIDNSPQV 425
+ + A L+D +DP I+ R +R++ + DG + KD++ L D AR+ ++D +
Sbjct: 195 SETGMTAFPLIDSVDP-HGFISYRLFRDATRYMDGHHVKDISCLNRDPARVVVVDCKKEA 253
Query: 426 FRLQLDNGIPIKSWFDDPSDCALISLLPFLETLA--AADDVRPII 468
FRLQ NG+ ++ W + D L+ L FL+T+A +DVR ++
Sbjct: 254 FRLQPYNGVALRPWDGNSDDRVLLDLSAFLKTIALNGVEDVRTVL 298
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 177,618,927
Number of Sequences: 539616
Number of extensions: 7760981
Number of successful extensions: 18935
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 18780
Number of HSP's gapped (non-prelim): 94
length of query: 476
length of database: 191,569,459
effective HSP length: 121
effective length of query: 355
effective length of database: 126,275,923
effective search space: 44827952665
effective search space used: 44827952665
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)