Query 011867
Match_columns 476
No_of_seqs 224 out of 1209
Neff 5.3
Searched_HMMs 46136
Date Fri Mar 29 06:06:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/011867.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/011867hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1605 TFIIF-interacting CTD 100.0 2.2E-46 4.7E-51 370.2 14.0 199 276-474 62-262 (262)
2 TIGR02251 HIF-SF_euk Dullard-l 100.0 5.9E-39 1.3E-43 296.9 17.5 161 303-463 1-162 (162)
3 PF03031 NIF: NLI interacting 100.0 6.9E-37 1.5E-41 278.8 15.7 158 304-465 1-159 (159)
4 TIGR02245 HAD_IIID1 HAD-superf 100.0 9.8E-37 2.1E-41 290.8 14.1 157 301-473 19-193 (195)
5 KOG2832 TFIIF-interacting CTD 100.0 3.6E-31 7.9E-36 268.2 11.3 156 301-472 187-344 (393)
6 TIGR02250 FCP1_euk FCP1-like p 100.0 1.2E-29 2.7E-34 234.1 13.5 137 301-440 4-154 (156)
7 smart00577 CPDc catalytic doma 99.9 4.7E-26 1E-30 207.1 15.2 145 302-446 1-148 (148)
8 COG5190 FCP1 TFIIF-interacting 99.9 9.6E-27 2.1E-31 241.0 8.6 173 301-474 210-384 (390)
9 KOG0323 TFIIF-interacting CTD 99.7 3.5E-18 7.6E-23 186.1 11.2 136 302-440 145-297 (635)
10 TIGR01685 MDP-1 magnesium-depe 98.7 7.1E-08 1.5E-12 91.2 8.7 136 304-441 3-158 (174)
11 PLN03243 haloacid dehalogenase 98.6 1.5E-08 3.3E-13 100.9 3.2 99 342-441 108-210 (260)
12 TIGR01681 HAD-SF-IIIC HAD-supe 98.6 3.3E-08 7.1E-13 88.1 4.2 108 304-426 1-121 (128)
13 PLN02770 haloacid dehalogenase 98.6 3.6E-08 7.8E-13 96.8 3.9 98 341-439 106-207 (248)
14 COG0637 Predicted phosphatase/ 98.6 2.1E-08 4.6E-13 97.3 2.1 99 342-441 85-187 (221)
15 PRK13288 pyrophosphatase PpaX; 98.6 4.6E-08 1E-12 93.0 4.1 97 341-438 80-180 (214)
16 PRK14988 GMP/IMP nucleotidase; 98.5 6.3E-08 1.4E-12 93.9 4.5 93 342-435 92-188 (224)
17 PRK10725 fructose-1-P/6-phosph 98.5 4.8E-08 1E-12 90.4 2.3 95 342-438 87-184 (188)
18 PLN02575 haloacid dehalogenase 98.5 8.9E-08 1.9E-12 100.6 4.5 98 342-440 215-316 (381)
19 PRK11587 putative phosphatase; 98.5 1.2E-07 2.5E-12 90.9 5.0 98 341-440 81-182 (218)
20 PRK13225 phosphoglycolate phos 98.5 1.6E-07 3.4E-12 94.3 6.1 96 342-438 141-237 (273)
21 TIGR01449 PGP_bact 2-phosphogl 98.5 7.3E-08 1.6E-12 90.8 2.8 98 341-439 83-184 (213)
22 TIGR01454 AHBA_synth_RP 3-amin 98.4 8E-08 1.7E-12 90.7 2.4 98 341-439 73-174 (205)
23 PRK13226 phosphoglycolate phos 98.4 1.3E-07 2.9E-12 91.5 3.5 96 341-437 93-192 (229)
24 TIGR01993 Pyr-5-nucltdase pyri 98.4 1.6E-07 3.5E-12 87.2 2.2 92 342-436 83-181 (184)
25 TIGR01422 phosphonatase phosph 98.4 4.1E-07 8.8E-12 88.9 4.9 98 342-440 98-201 (253)
26 TIGR02009 PGMB-YQAB-SF beta-ph 98.3 1.9E-07 4.2E-12 85.9 1.7 92 342-436 87-182 (185)
27 PRK10826 2-deoxyglucose-6-phos 98.3 3.9E-07 8.4E-12 87.3 3.9 101 342-443 91-195 (222)
28 TIGR03351 PhnX-like phosphonat 98.3 5.4E-07 1.2E-11 85.8 4.6 95 342-436 86-186 (220)
29 cd01427 HAD_like Haloacid deha 98.3 1.4E-06 3.1E-11 73.8 5.8 107 305-427 1-127 (139)
30 TIGR01662 HAD-SF-IIIA HAD-supe 98.3 1E-06 2.2E-11 77.7 4.7 114 304-435 1-126 (132)
31 PRK13223 phosphoglycolate phos 98.2 7.6E-07 1.7E-11 88.9 3.6 94 342-436 100-197 (272)
32 TIGR01656 Histidinol-ppas hist 98.2 1.1E-06 2.3E-11 79.7 4.2 117 304-436 1-141 (147)
33 PRK13478 phosphonoacetaldehyde 98.2 1.7E-06 3.7E-11 85.5 5.4 98 342-439 100-202 (267)
34 TIGR00338 serB phosphoserine p 98.2 5.1E-07 1.1E-11 85.8 1.6 97 342-440 84-194 (219)
35 TIGR00213 GmhB_yaeD D,D-heptos 98.2 3.2E-06 7E-11 78.7 6.9 115 304-436 2-146 (176)
36 PLN02940 riboflavin kinase 98.2 6.6E-07 1.4E-11 93.9 2.1 97 342-439 92-193 (382)
37 COG4996 Predicted phosphatase 98.2 1.2E-05 2.5E-10 73.2 9.5 145 305-451 2-157 (164)
38 PRK13222 phosphoglycolate phos 98.2 1.5E-06 3.3E-11 82.4 3.9 95 341-436 91-189 (226)
39 TIGR01684 viral_ppase viral ph 98.2 6E-06 1.3E-10 84.1 8.3 122 301-445 124-281 (301)
40 COG5190 FCP1 TFIIF-interacting 98.1 1.3E-06 2.8E-11 91.8 3.5 135 301-438 24-172 (390)
41 PRK10563 6-phosphogluconate ph 98.1 8.7E-07 1.9E-11 84.5 1.6 96 341-439 86-185 (221)
42 TIGR01261 hisB_Nterm histidino 98.1 9.1E-06 2E-10 75.7 7.6 123 304-441 2-148 (161)
43 TIGR01549 HAD-SF-IA-v1 haloaci 98.1 2.1E-06 4.5E-11 77.1 2.8 82 341-426 62-147 (154)
44 PRK08942 D,D-heptose 1,7-bisph 98.1 8.8E-06 1.9E-10 76.0 6.9 117 303-436 3-143 (181)
45 PHA03398 viral phosphatase sup 98.1 1.8E-05 3.9E-10 80.7 9.5 122 301-445 126-283 (303)
46 PHA02597 30.2 hypothetical pro 98.1 6.8E-07 1.5E-11 83.9 -0.7 98 341-440 72-174 (197)
47 PF12689 Acid_PPase: Acid Phos 98.0 2.2E-05 4.8E-10 74.1 8.2 118 303-426 3-137 (169)
48 PHA02530 pseT polynucleotide k 98.0 8.2E-06 1.8E-10 81.6 5.2 128 301-439 156-295 (300)
49 TIGR01686 FkbH FkbH-like domai 97.9 2.3E-05 4.9E-10 80.2 6.9 110 302-427 2-117 (320)
50 PLN02919 haloacid dehalogenase 97.9 1.5E-05 3.2E-10 93.6 6.0 105 344-448 162-270 (1057)
51 TIGR01672 AphA HAD superfamily 97.8 2.7E-05 5.9E-10 77.1 6.2 132 301-437 61-208 (237)
52 PRK06698 bifunctional 5'-methy 97.8 9.4E-06 2E-10 86.8 2.9 93 342-437 329-424 (459)
53 TIGR01664 DNA-3'-Pase DNA 3'-p 97.8 4.3E-05 9.4E-10 71.3 6.9 108 302-423 12-137 (166)
54 PRK06769 hypothetical protein; 97.8 3.2E-05 6.8E-10 72.4 4.9 120 302-439 3-136 (173)
55 PF13419 HAD_2: Haloacid dehal 97.7 3.2E-05 6.9E-10 68.9 4.3 95 340-435 74-172 (176)
56 PRK09552 mtnX 2-hydroxy-3-keto 97.7 0.00011 2.3E-09 70.7 7.3 97 341-437 72-184 (219)
57 COG0546 Gph Predicted phosphat 97.7 4E-05 8.8E-10 74.0 4.4 97 342-439 88-188 (220)
58 TIGR02253 CTE7 HAD superfamily 97.6 4.9E-05 1.1E-09 72.1 4.5 96 341-437 92-192 (221)
59 TIGR01509 HAD-SF-IA-v3 haloaci 97.6 7E-05 1.5E-09 68.3 5.0 92 342-435 84-179 (183)
60 TIGR01668 YqeG_hyp_ppase HAD s 97.5 0.0002 4.4E-09 66.8 6.4 110 301-439 23-135 (170)
61 PRK05446 imidazole glycerol-ph 97.5 0.00032 7E-09 73.4 8.4 121 302-437 1-145 (354)
62 TIGR01428 HAD_type_II 2-haloal 97.5 0.00011 2.4E-09 68.9 4.5 94 342-436 91-188 (198)
63 PF05152 DUF705: Protein of un 97.5 0.00061 1.3E-08 69.1 9.9 72 301-394 120-193 (297)
64 PRK09456 ?-D-glucose-1-phospha 97.5 0.00012 2.5E-09 69.2 4.6 101 342-442 83-187 (199)
65 PRK13582 thrH phosphoserine ph 97.5 3.1E-05 6.7E-10 72.8 0.5 95 341-436 66-167 (205)
66 TIGR01670 YrbI-phosphatas 3-de 97.4 0.00021 4.5E-09 65.6 5.5 111 304-435 2-114 (154)
67 TIGR01489 DKMTPPase-SF 2,3-dik 97.4 0.00013 2.8E-09 67.0 4.1 86 342-428 71-177 (188)
68 TIGR02254 YjjG/YfnB HAD superf 97.4 0.00016 3.5E-09 68.3 4.9 95 342-437 96-195 (224)
69 KOG2914 Predicted haloacid-hal 97.3 0.0001 2.3E-09 72.4 2.5 100 339-439 88-195 (222)
70 PLN02954 phosphoserine phospha 97.3 0.00016 3.4E-09 69.0 3.4 92 342-435 83-191 (224)
71 PRK09449 dUMP phosphatase; Pro 97.3 0.00023 5E-09 67.9 4.4 94 342-436 94-192 (224)
72 PRK11009 aphA acid phosphatase 97.3 0.00084 1.8E-08 66.6 8.1 131 301-437 61-208 (237)
73 KOG3109 Haloacid dehalogenase- 97.2 0.00025 5.3E-09 69.6 3.4 88 342-431 99-196 (244)
74 TIGR01663 PNK-3'Pase polynucle 97.1 0.0013 2.9E-08 72.1 8.4 109 301-423 166-294 (526)
75 TIGR02247 HAD-1A3-hyp Epoxide 97.0 0.00044 9.5E-09 65.5 2.9 99 341-440 92-196 (211)
76 TIGR01990 bPGM beta-phosphoglu 97.0 0.00063 1.4E-08 62.5 3.7 91 343-436 87-181 (185)
77 TIGR01548 HAD-SF-IA-hyp1 haloa 97.0 0.0017 3.7E-08 61.1 6.4 81 344-426 107-191 (197)
78 PLN02779 haloacid dehalogenase 97.0 0.001 2.3E-08 67.1 5.2 98 342-440 143-246 (286)
79 TIGR01689 EcbF-BcbF capsule bi 97.0 0.0021 4.6E-08 58.0 6.7 73 304-393 2-87 (126)
80 TIGR02137 HSK-PSP phosphoserin 96.9 0.00048 1E-08 66.4 2.1 82 342-427 67-158 (203)
81 PLN02811 hydrolase 96.9 0.0012 2.7E-08 63.3 4.8 97 342-439 77-183 (220)
82 PRK11133 serB phosphoserine ph 96.9 0.00052 1.1E-08 70.9 2.3 96 341-437 179-288 (322)
83 TIGR01491 HAD-SF-IB-PSPlk HAD- 96.8 0.0025 5.4E-08 59.2 6.1 94 342-436 79-186 (201)
84 TIGR02252 DREG-2 REG-2-like, H 96.8 0.0013 2.9E-08 61.7 4.2 90 343-434 105-199 (203)
85 TIGR01459 HAD-SF-IIA-hyp4 HAD- 96.8 0.0029 6.2E-08 61.9 6.5 96 302-424 7-106 (242)
86 PRK09484 3-deoxy-D-manno-octul 96.8 0.0026 5.6E-08 60.0 5.9 115 301-436 19-135 (183)
87 COG1011 Predicted hydrolase (H 96.7 0.0023 5E-08 60.7 5.5 84 342-426 98-184 (229)
88 PRK08238 hypothetical protein; 96.7 0.0036 7.9E-08 68.0 7.7 76 342-424 71-150 (479)
89 TIGR01691 enolase-ppase 2,3-di 96.5 0.003 6.5E-08 61.9 4.4 96 341-437 93-193 (220)
90 TIGR01493 HAD-SF-IA-v2 Haloaci 96.2 0.0015 3.2E-08 59.9 0.5 77 342-425 89-168 (175)
91 COG0560 SerB Phosphoserine pho 96.2 0.0041 9E-08 60.5 3.4 84 342-426 76-173 (212)
92 COG0561 Cof Predicted hydrolas 96.0 0.022 4.7E-07 56.0 7.7 59 302-383 2-61 (264)
93 TIGR01533 lipo_e_P4 5'-nucleot 96.0 0.007 1.5E-07 61.1 4.1 117 301-426 73-201 (266)
94 TIGR02726 phenyl_P_delta pheny 95.8 0.018 3.9E-07 54.3 5.9 114 302-437 6-122 (169)
95 PRK00192 mannosyl-3-phosphogly 95.7 0.036 7.8E-07 55.1 7.7 57 303-382 4-61 (273)
96 PF08282 Hydrolase_3: haloacid 95.5 0.032 7E-07 52.5 6.6 54 306-382 1-55 (254)
97 PF08645 PNK3P: Polynucleotide 95.5 0.027 5.9E-07 52.4 5.9 104 304-424 1-129 (159)
98 PRK03669 mannosyl-3-phosphogly 95.5 0.044 9.5E-07 54.5 7.6 59 301-382 5-64 (271)
99 PTZ00445 p36-lilke protein; Pr 95.4 0.025 5.5E-07 55.5 5.4 132 301-440 41-205 (219)
100 TIGR01487 SPP-like sucrose-pho 95.3 0.049 1.1E-06 52.0 7.1 57 304-383 2-59 (215)
101 PRK10513 sugar phosphate phosp 95.3 0.045 9.9E-07 53.7 7.1 57 303-382 3-60 (270)
102 PRK10530 pyridoxal phosphate ( 95.3 0.053 1.2E-06 53.0 7.5 58 303-383 3-61 (272)
103 COG2179 Predicted hydrolase of 95.3 0.034 7.5E-07 52.7 5.6 111 301-440 26-141 (175)
104 PRK01158 phosphoglycolate phos 95.2 0.07 1.5E-06 51.0 7.7 58 303-383 3-61 (230)
105 TIGR02461 osmo_MPG_phos mannos 95.0 0.062 1.3E-06 52.5 6.8 53 306-382 2-55 (225)
106 PF13344 Hydrolase_6: Haloacid 95.0 0.048 1E-06 46.9 5.3 50 306-379 1-51 (101)
107 PRK10976 putative hydrolase; P 94.9 0.073 1.6E-06 52.3 7.1 58 303-383 2-60 (266)
108 PRK15126 thiamin pyrimidine py 94.9 0.075 1.6E-06 52.5 7.2 58 303-383 2-60 (272)
109 PRK10748 flavin mononucleotide 94.9 0.02 4.2E-07 56.0 3.0 90 342-437 112-205 (238)
110 TIGR03333 salvage_mtnX 2-hydro 94.9 0.059 1.3E-06 51.7 6.2 94 341-434 68-177 (214)
111 TIGR00099 Cof-subfamily Cof su 94.8 0.072 1.6E-06 52.1 6.7 55 305-382 1-56 (256)
112 TIGR01544 HAD-SF-IE haloacid d 94.7 0.096 2.1E-06 53.4 7.4 105 341-446 119-248 (277)
113 smart00775 LNS2 LNS2 domain. T 94.3 0.1 2.2E-06 48.4 6.1 62 306-379 2-67 (157)
114 TIGR02463 MPGP_rel mannosyl-3- 94.3 0.1 2.2E-06 49.8 6.3 54 306-382 2-56 (221)
115 PTZ00174 phosphomannomutase; P 94.1 0.13 2.8E-06 50.6 6.8 53 302-377 4-57 (247)
116 TIGR01482 SPP-subfamily Sucros 93.9 0.15 3.2E-06 48.4 6.7 53 306-381 1-54 (225)
117 TIGR01488 HAD-SF-IB Haloacid D 93.6 0.11 2.5E-06 47.1 5.0 84 341-425 71-170 (177)
118 TIGR01486 HAD-SF-IIB-MPGP mann 93.5 0.19 4.2E-06 49.3 6.8 55 305-382 1-56 (256)
119 PRK10444 UMP phosphatase; Prov 93.4 0.13 2.8E-06 51.2 5.4 53 304-380 2-55 (248)
120 TIGR01484 HAD-SF-IIB HAD-super 93.4 0.17 3.7E-06 47.6 5.9 54 305-380 1-55 (204)
121 COG0241 HisB Histidinol phosph 93.2 0.14 2.9E-06 49.2 5.0 126 303-442 5-154 (181)
122 PRK12702 mannosyl-3-phosphogly 93.1 0.26 5.6E-06 50.9 7.1 57 304-383 2-59 (302)
123 PF09419 PGP_phosphatase: Mito 92.5 0.33 7.3E-06 46.0 6.5 94 301-424 39-147 (168)
124 PRK14502 bifunctional mannosyl 92.5 0.49 1.1E-05 53.8 8.9 59 301-382 414-473 (694)
125 PLN02645 phosphoglycolate phos 92.4 0.21 4.5E-06 51.1 5.4 55 301-379 26-81 (311)
126 TIGR01456 CECR5 HAD-superfamil 92.3 0.25 5.4E-06 50.8 5.9 53 304-380 1-62 (321)
127 COG4502 5'(3')-deoxyribonucleo 92.2 0.27 5.9E-06 45.8 5.3 85 342-441 67-155 (180)
128 TIGR01452 PGP_euk phosphoglyco 92.2 0.22 4.8E-06 49.9 5.3 42 304-369 3-45 (279)
129 PF11019 DUF2608: Protein of u 91.8 0.23 5E-06 49.8 4.8 139 302-441 19-210 (252)
130 COG3882 FkbH Predicted enzyme 91.8 0.24 5.3E-06 53.9 5.2 133 295-440 214-355 (574)
131 PLN02887 hydrolase family prot 91.7 0.37 8.1E-06 53.9 6.8 59 301-382 306-365 (580)
132 TIGR01490 HAD-SF-IB-hyp1 HAD-s 91.4 0.3 6.5E-06 45.7 4.8 84 343-427 87-185 (202)
133 PLN02423 phosphomannomutase 90.9 0.56 1.2E-05 46.4 6.4 54 302-381 6-59 (245)
134 TIGR01458 HAD-SF-IIA-hyp3 HAD- 90.8 0.35 7.5E-06 48.1 4.9 48 304-371 2-50 (257)
135 PRK10187 trehalose-6-phosphate 90.5 0.58 1.3E-05 46.9 6.3 62 301-380 12-75 (266)
136 TIGR01457 HAD-SF-IIA-hyp2 HAD- 90.1 0.52 1.1E-05 46.6 5.4 54 304-381 2-59 (249)
137 TIGR01485 SPP_plant-cyano sucr 89.8 0.66 1.4E-05 45.4 5.8 60 303-382 1-61 (249)
138 TIGR01675 plant-AP plant acid 88.4 0.42 9.1E-06 47.5 3.4 92 301-393 75-172 (229)
139 TIGR01511 ATPase-IB1_Cu copper 88.1 1.1 2.4E-05 49.7 6.8 87 340-436 402-489 (562)
140 COG0647 NagD Predicted sugar p 87.9 0.84 1.8E-05 46.4 5.2 54 301-378 6-60 (269)
141 TIGR01460 HAD-SF-IIA Haloacid 87.4 0.83 1.8E-05 44.7 4.8 51 306-380 1-56 (236)
142 PF00702 Hydrolase: haloacid d 86.7 1 2.2E-05 41.8 4.7 79 340-424 124-206 (215)
143 COG4359 Uncharacterized conser 86.2 2 4.4E-05 41.8 6.5 41 342-382 72-113 (220)
144 TIGR02244 HAD-IG-Ncltidse HAD 84.5 3.2 7E-05 43.7 7.6 55 338-392 179-241 (343)
145 COG2503 Predicted secreted aci 83.3 0.75 1.6E-05 46.3 2.2 90 301-392 77-176 (274)
146 PLN02151 trehalose-phosphatase 83.2 2.2 4.7E-05 45.1 5.7 59 301-377 96-154 (354)
147 PLN03017 trehalose-phosphatase 82.7 2.2 4.9E-05 45.2 5.6 60 301-378 109-168 (366)
148 PF06941 NT5C: 5' nucleotidase 81.9 1.2 2.7E-05 42.0 3.0 83 342-439 72-161 (191)
149 TIGR01548 HAD-SF-IA-hyp1 haloa 80.2 0.77 1.7E-05 43.1 1.0 15 305-319 2-16 (197)
150 PLN02580 trehalose-phosphatase 79.9 3.6 7.9E-05 43.9 6.0 60 301-378 117-176 (384)
151 TIGR01525 ATPase-IB_hvy heavy 79.3 3.6 7.7E-05 45.5 6.0 88 340-436 381-470 (556)
152 COG1877 OtsB Trehalose-6-phosp 79.3 3.2 6.9E-05 42.2 5.1 59 301-377 16-76 (266)
153 TIGR00685 T6PP trehalose-phosp 77.4 2.4 5.1E-05 41.6 3.5 49 302-368 2-52 (244)
154 KOG3120 Predicted haloacid deh 77.2 0.86 1.9E-05 45.4 0.4 41 342-382 83-125 (256)
155 PRK14501 putative bifunctional 77.2 3.7 8.1E-05 46.9 5.5 61 301-379 490-552 (726)
156 TIGR02471 sucr_syn_bact_C sucr 76.9 3.2 7E-05 40.1 4.3 54 305-382 1-54 (236)
157 TIGR02253 CTE7 HAD superfamily 76.8 1.4 3.1E-05 41.6 1.7 16 304-319 3-18 (221)
158 KOG3085 Predicted hydrolase (H 76.8 1.9 4E-05 43.2 2.6 96 341-439 112-212 (237)
159 TIGR02252 DREG-2 REG-2-like, H 75.1 1.4 3.1E-05 41.2 1.3 16 304-319 1-16 (203)
160 PRK11590 hypothetical protein; 75.1 1.7 3.6E-05 41.7 1.7 39 342-380 94-134 (211)
161 COG3769 Predicted hydrolase (H 74.5 8.1 0.00017 38.8 6.3 57 303-383 7-64 (274)
162 PRK10748 flavin mononucleotide 74.2 1.8 3.8E-05 42.3 1.7 17 302-318 9-25 (238)
163 TIGR01680 Veg_Stor_Prot vegeta 72.5 4.5 9.8E-05 41.4 4.2 91 302-393 100-197 (275)
164 PF03767 Acid_phosphat_B: HAD 72.3 3.7 8E-05 40.5 3.4 65 301-371 70-144 (229)
165 PF12710 HAD: haloacid dehalog 71.2 5.2 0.00011 36.6 4.0 47 344-390 86-138 (192)
166 PRK11590 hypothetical protein; 71.0 6.2 0.00013 37.8 4.6 17 302-318 5-21 (211)
167 PLN02779 haloacid dehalogenase 71.0 2.2 4.7E-05 43.2 1.5 18 301-318 38-55 (286)
168 TIGR01990 bPGM beta-phosphoglu 70.9 1.8 3.8E-05 39.6 0.8 15 305-319 1-15 (185)
169 PF06888 Put_Phosphatase: Puta 70.5 9.6 0.00021 38.1 5.9 50 341-391 69-121 (234)
170 TIGR02254 YjjG/YfnB HAD superf 70.4 2.2 4.8E-05 40.2 1.3 16 304-319 2-17 (224)
171 PF05116 S6PP: Sucrose-6F-phos 69.5 6.2 0.00013 39.1 4.3 55 302-380 1-57 (247)
172 TIGR01428 HAD_type_II 2-haloal 69.3 2.4 5.1E-05 39.6 1.3 15 304-318 2-16 (198)
173 TIGR01512 ATPase-IB2_Cd heavy 69.2 5.8 0.00013 43.7 4.5 86 340-434 359-446 (536)
174 TIGR01493 HAD-SF-IA-v2 Haloaci 68.8 2.3 5.1E-05 38.7 1.1 13 306-318 2-14 (175)
175 TIGR02247 HAD-1A3-hyp Epoxide 68.2 2.9 6.2E-05 39.5 1.6 15 304-318 3-17 (211)
176 PF08235 LNS2: LNS2 (Lipin/Ned 67.6 14 0.0003 34.9 5.9 61 306-378 2-63 (157)
177 TIGR01545 YfhB_g-proteo haloac 67.1 13 0.00028 36.0 5.9 38 342-379 93-132 (210)
178 PRK09449 dUMP phosphatase; Pro 67.1 2.9 6.3E-05 39.7 1.4 15 303-317 3-17 (224)
179 TIGR01491 HAD-SF-IB-PSPlk HAD- 66.8 3.3 7.2E-05 38.3 1.7 16 303-318 4-19 (201)
180 PF05822 UMPH-1: Pyrimidine 5' 66.2 23 0.0005 35.7 7.6 102 341-443 88-213 (246)
181 PLN02382 probable sucrose-phos 66.1 14 0.00031 39.6 6.5 17 301-317 7-23 (413)
182 PF13419 HAD_2: Haloacid dehal 58.5 4.6 0.0001 35.5 1.0 13 306-318 1-13 (176)
183 TIGR01509 HAD-SF-IA-v3 haloaci 58.4 4.4 9.6E-05 36.6 0.9 15 305-319 1-15 (183)
184 PLN02205 alpha,alpha-trehalose 53.7 21 0.00046 42.0 5.6 59 301-379 594-654 (854)
185 KOG4549 Magnesium-dependent ph 52.6 48 0.001 30.6 6.5 121 302-424 4-133 (144)
186 PF02358 Trehalose_PPase: Treh 48.4 21 0.00045 34.7 3.9 52 307-376 1-54 (235)
187 PF08484 Methyltransf_14: C-me 45.7 63 0.0014 30.3 6.4 66 344-440 53-120 (160)
188 PRK09456 ?-D-glucose-1-phospha 44.9 12 0.00026 35.2 1.5 14 305-318 2-15 (199)
189 TIGR01545 YfhB_g-proteo haloac 43.0 13 0.00029 35.9 1.5 17 302-318 4-20 (210)
190 COG1011 Predicted hydrolase (H 42.5 15 0.00032 34.6 1.8 17 302-318 3-19 (229)
191 PLN03063 alpha,alpha-trehalose 42.5 56 0.0012 38.2 6.7 63 301-378 505-569 (797)
192 PRK10671 copA copper exporting 42.5 42 0.00092 39.2 5.7 84 342-434 649-733 (834)
193 COG1778 Low specificity phosph 40.5 1.4E+02 0.0029 28.7 7.6 116 301-437 6-123 (170)
194 PLN03064 alpha,alpha-trehalose 36.8 72 0.0016 38.1 6.4 70 301-379 589-660 (934)
195 KOG2134 Polynucleotide kinase 33.3 50 0.0011 35.6 4.0 57 301-368 73-130 (422)
196 TIGR01488 HAD-SF-IB Haloacid D 33.0 18 0.0004 32.6 0.7 13 306-318 2-14 (177)
197 PF12710 HAD: haloacid dehalog 32.6 24 0.00053 32.1 1.5 13 306-318 1-13 (192)
198 KOG1615 Phosphoserine phosphat 32.2 68 0.0015 31.8 4.4 85 342-427 87-187 (227)
199 KOG3040 Predicted sugar phosph 30.2 1.6E+02 0.0035 29.6 6.6 104 301-429 5-125 (262)
200 TIGR01490 HAD-SF-IB-hyp1 HAD-s 29.9 26 0.00056 32.6 1.2 13 306-318 2-14 (202)
201 TIGR01459 HAD-SF-IIA-hyp4 HAD- 27.4 8.1 0.00017 37.7 -2.8 89 345-435 140-236 (242)
202 PF05761 5_nucleotid: 5' nucle 26.9 1.1E+02 0.0023 33.6 5.4 53 339-391 179-240 (448)
203 TIGR02826 RNR_activ_nrdG3 anae 25.7 1.4E+02 0.003 27.5 5.2 63 343-420 72-136 (147)
204 PF00702 Hydrolase: haloacid d 24.9 41 0.00088 31.0 1.5 15 304-318 2-16 (215)
205 cd06537 CIDE_N_B CIDE_N domain 24.6 1.2E+02 0.0026 25.8 4.1 15 303-317 39-53 (81)
206 cd06539 CIDE_N_A CIDE_N domain 22.9 1.2E+02 0.0025 25.6 3.7 15 303-317 40-54 (78)
207 PF06941 NT5C: 5' nucleotidase 22.1 54 0.0012 30.8 1.8 16 303-318 2-17 (191)
208 PRK11033 zntA zinc/cadmium/mer 21.8 2.4E+02 0.0051 32.8 7.2 76 339-425 564-640 (741)
209 smart00266 CAD Domains present 21.3 1.2E+02 0.0027 25.2 3.4 15 303-317 38-52 (74)
210 TIGR01458 HAD-SF-IIA-hyp3 HAD- 21.2 10 0.00022 37.8 -3.6 92 346-438 123-222 (257)
211 cd06538 CIDE_N_FSP27 CIDE_N do 20.5 1.4E+02 0.003 25.3 3.6 15 303-317 39-53 (79)
212 COG4229 Predicted enolase-phos 20.3 1.2E+02 0.0026 29.9 3.6 90 343-434 103-198 (229)
No 1
>KOG1605 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=100.00 E-value=2.2e-46 Score=370.21 Aligned_cols=199 Identities=54% Similarity=0.877 Sum_probs=180.1
Q ss_pred HhhcCCCCCCCCCCCCCCCCCCcccCCceEEEEeccccccccc--CCCCCCCCceeEEEecceeeeEEEeeCchHHHHHH
Q 011867 276 FIRNFLDLSDMDPDLLPALVPKETERKRVTLVLDLDETLVHSS--TEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLE 353 (476)
Q Consensus 276 ~i~~lp~ls~~~~~~~p~llpk~~~~kKktLVLDLDgTLVhS~--~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~ 353 (476)
+++..+..........+.++++....+|++|||||||||+||+ .++...+++..++.+.+..+.+||.+|||+++||+
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~kk~lVLDLDeTLvHss~~~~~~~~~d~~~~v~~~~~~~~~yV~kRP~vdeFL~ 141 (262)
T KOG1605|consen 62 FEKYQPVKYASQTPLSPVLPLRLATVGRKTLVLDLDETLVHSSLNLKPIVNADFTVPVEIDGHIHQVYVRKRPHVDEFLS 141 (262)
T ss_pred hhhcccccccccccccccCCcccccCCCceEEEeCCCcccccccccCCCCCcceeeeeeeCCcceEEEEEcCCCHHHHHH
Confidence 3344444433333444544444444899999999999999999 67777899999999998999999999999999999
Q ss_pred HhhcCceEEEEcCCchHHHHHHHHHhCCCCceeeEEEecccceecCCcccccccccCCCCCcEEEEECChhhhccCCCce
Q 011867 354 RVAEMFEIIVFTASESVYAEKLLDILDPDRMLIARRAYRESCIFSDGSYAKDLTILGVDLARIAIIDNSPQVFRLQLDNG 433 (476)
Q Consensus 354 ~Ls~~yEIvIfTas~~~YA~~ILd~LDP~~k~F~~rL~Re~c~~~~g~yvKDLs~Lgrdl~~vIIIDDsp~~~~~qp~Ng 433 (476)
+++++||++||||+...||.++++.|||.+++|++|+||++|+...|.|+|||+++|+++++||||||+|.+|++||+||
T Consensus 142 ~~s~~~e~v~FTAs~~~Ya~~v~D~LD~~~~i~~~RlyR~~C~~~~g~yvKdls~~~~dL~~viIiDNsP~sy~~~p~Ng 221 (262)
T KOG1605|consen 142 RVSKWYELVLFTASLEVYADPLLDILDPDRKIISHRLYRDSCTLKDGNYVKDLSVLGRDLSKVIIVDNSPQSYRLQPENG 221 (262)
T ss_pred HhHHHHHHHHHHhhhHHHHHHHHHHccCCCCeeeeeecccceEeECCcEEEEcceeccCcccEEEEcCChHHhccCccCC
Confidence 99999999999999999999999999998889999999999999999999999999999999999999999999999999
Q ss_pred eeeeeecCCCChhHHHHHHHHHHhccCCCCchHHHHhhhCC
Q 011867 434 IPIKSWFDDPSDCALISLLPFLETLAAADDVRPIIAEKFSI 474 (476)
Q Consensus 434 I~I~~f~~d~~D~eLl~Ll~fLe~La~~~DVR~~l~k~f~~ 474 (476)
|||++|++++.|.||++|+||||.|+.++|||++++++|+.
T Consensus 222 IpI~sw~~d~~D~eLL~LlpfLe~L~~~~Dvr~~l~~~~~~ 262 (262)
T KOG1605|consen 222 IPIKSWFDDPTDTELLKLLPFLEALAFVDDVRPILARRFGN 262 (262)
T ss_pred CcccccccCCChHHHHHHHHHHHHhcccccHHHHHHHhhcC
Confidence 99999999999999999999999999999999999999984
No 2
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=100.00 E-value=5.9e-39 Score=296.86 Aligned_cols=161 Identities=54% Similarity=0.903 Sum_probs=153.0
Q ss_pred ceEEEEecccccccccCCCCC-CCCceeEEEecceeeeEEEeeCchHHHHHHHhhcCceEEEEcCCchHHHHHHHHHhCC
Q 011867 303 RVTLVLDLDETLVHSSTEPCD-DADFTFQVFFNMKEHTVYVRQRPFLRTFLERVAEMFEIIVFTASESVYAEKLLDILDP 381 (476)
Q Consensus 303 KktLVLDLDgTLVhS~~~~~~-~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls~~yEIvIfTas~~~YA~~ILd~LDP 381 (476)
|++|||||||||||+...+.. ..++.+.+...+....+||++|||+.+||++|+++|||+|||++.+.||+++++.|||
T Consensus 1 k~~lvlDLDeTLi~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l~~~yei~I~Ts~~~~yA~~il~~ldp 80 (162)
T TIGR02251 1 KKTLVLDLDETLVHSTFKMPKVDADFKVPVLIDGKIIPVYVFKRPHVDEFLERVSKWYELVIFTASLEEYADPVLDILDR 80 (162)
T ss_pred CcEEEEcCCCCcCCCCCCCCCCCCceEEEEEecCcEEEEEEEECCCHHHHHHHHHhcCEEEEEcCCcHHHHHHHHHHHCc
Confidence 689999999999999887755 6778788877777889999999999999999999999999999999999999999999
Q ss_pred CCceeeEEEecccceecCCcccccccccCCCCCcEEEEECChhhhccCCCceeeeeeecCCCChhHHHHHHHHHHhccCC
Q 011867 382 DRMLIARRAYRESCIFSDGSYAKDLTILGVDLARIAIIDNSPQVFRLQLDNGIPIKSWFDDPSDCALISLLPFLETLAAA 461 (476)
Q Consensus 382 ~~k~F~~rL~Re~c~~~~g~yvKDLs~Lgrdl~~vIIIDDsp~~~~~qp~NgI~I~~f~~d~~D~eLl~Ll~fLe~La~~ 461 (476)
.+.+|.++++|++|...++.|.|+|+.+|+++++||+|||+|..|..||+|||+|.+|.|+.+|++|.+|++||+.|+.+
T Consensus 81 ~~~~f~~~l~r~~~~~~~~~~~K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i~~f~~~~~D~~L~~l~~~L~~l~~~ 160 (162)
T TIGR02251 81 GGKVISRRLYRESCVFTNGKYVKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPIKSWFGDPNDTELLNLIPFLEGLRFE 160 (162)
T ss_pred CCCEEeEEEEccccEEeCCCEEeEchhcCCChhhEEEEeCChhhhccCccCEeecCCCCCCCCHHHHHHHHHHHHHHhcc
Confidence 98899999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CC
Q 011867 462 DD 463 (476)
Q Consensus 462 ~D 463 (476)
+|
T Consensus 161 ~~ 162 (162)
T TIGR02251 161 DD 162 (162)
T ss_pred CC
Confidence 76
No 3
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=100.00 E-value=6.9e-37 Score=278.78 Aligned_cols=158 Identities=49% Similarity=0.839 Sum_probs=129.9
Q ss_pred eEEEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhhcCceEEEEcCCchHHHHHHHHHhCCCC
Q 011867 304 VTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVAEMFEIIVFTASESVYAEKLLDILDPDR 383 (476)
Q Consensus 304 ktLVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls~~yEIvIfTas~~~YA~~ILd~LDP~~ 383 (476)
|+|||||||||+|+........++... . ....++|++|||+++||++++++|||+|||++.+.||+++++.|+|.+
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~~~~~~~---~-~~~~~~v~~RP~l~~FL~~l~~~~ev~i~T~~~~~ya~~v~~~ldp~~ 76 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLPYDFKII---D-QRGGYYVKLRPGLDEFLEELSKHYEVVIWTSASEEYAEPVLDALDPNG 76 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT-SEEEE---T-EEEEEEEEE-TTHHHHHHHHHHHCEEEEE-SS-HHHHHHHHHHHTTTT
T ss_pred CEEEEeCCCcEEEEeecCCCCccccee---c-cccceeEeeCchHHHHHHHHHHhceEEEEEeehhhhhhHHHHhhhhhc
Confidence 689999999999998765443333221 2 566789999999999999999999999999999999999999999988
Q ss_pred ceeeEEEecccceecCCcccccccccCCCCCcEEEEECChhhhccCCCceeeeeeecCC-CChhHHHHHHHHHHhccCCC
Q 011867 384 MLIARRAYRESCIFSDGSYAKDLTILGVDLARIAIIDNSPQVFRLQLDNGIPIKSWFDD-PSDCALISLLPFLETLAAAD 462 (476)
Q Consensus 384 k~F~~rL~Re~c~~~~g~yvKDLs~Lgrdl~~vIIIDDsp~~~~~qp~NgI~I~~f~~d-~~D~eLl~Ll~fLe~La~~~ 462 (476)
.+|.++++|++|...++.++|||+++|+++++||+|||+|.+|..||+|+|+|++|.++ .+|.+|.+|++||+.|+.++
T Consensus 77 ~~~~~~~~r~~~~~~~~~~~KdL~~l~~~~~~vvivDD~~~~~~~~~~N~i~v~~f~~~~~~D~~L~~l~~~L~~l~~~~ 156 (159)
T PF03031_consen 77 KLFSRRLYRDDCTFDKGSYIKDLSKLGRDLDNVVIVDDSPRKWALQPDNGIPVPPFFGDTPNDRELLRLLPFLEELAKED 156 (159)
T ss_dssp SSEEEEEEGGGSEEETTEEE--GGGSSS-GGGEEEEES-GGGGTTSGGGEEE----SSCHTT--HHHHHHHHHHHHHTHS
T ss_pred cccccccccccccccccccccchHHHhhccccEEEEeCCHHHeeccCCceEEeccccCCCcchhHHHHHHHHHHHhCccc
Confidence 89999999999998888889999999999999999999999999999999999999999 99999999999999999999
Q ss_pred Cch
Q 011867 463 DVR 465 (476)
Q Consensus 463 DVR 465 (476)
|||
T Consensus 157 Dvr 159 (159)
T PF03031_consen 157 DVR 159 (159)
T ss_dssp -CH
T ss_pred CCC
Confidence 998
No 4
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=100.00 E-value=9.8e-37 Score=290.82 Aligned_cols=157 Identities=22% Similarity=0.312 Sum_probs=135.4
Q ss_pred CCceEEEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhhcCceEEEEcCCchHHHHHHHHHhC
Q 011867 301 RKRVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVAEMFEIIVFTASESVYAEKLLDILD 380 (476)
Q Consensus 301 ~kKktLVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls~~yEIvIfTas~~~YA~~ILd~LD 380 (476)
.+|++|||||||||||+... ..+.++.+|||+++||++++++|||+||||+.+.||+++++.|+
T Consensus 19 ~~kklLVLDLDeTLvh~~~~----------------~~~~~~~kRP~l~eFL~~~~~~feIvVwTAa~~~ya~~~l~~l~ 82 (195)
T TIGR02245 19 EGKKLLVLDIDYTLFDHRSP----------------AETGEELMRPYLHEFLTSAYEDYDIVIWSATSMKWIEIKMTELG 82 (195)
T ss_pred CCCcEEEEeCCCceEccccc----------------CCCceEEeCCCHHHHHHHHHhCCEEEEEecCCHHHHHHHHHHhc
Confidence 67899999999999997431 11457889999999999999999999999999999999999997
Q ss_pred CCC-ceeeEEEecccce------ecCCc-cccccccc------CCCCCcEEEEECChhhhccCCCceeeeeeecC----C
Q 011867 381 PDR-MLIARRAYRESCI------FSDGS-YAKDLTIL------GVDLARIAIIDNSPQVFRLQLDNGIPIKSWFD----D 442 (476)
Q Consensus 381 P~~-k~F~~rL~Re~c~------~~~g~-yvKDLs~L------grdl~~vIIIDDsp~~~~~qp~NgI~I~~f~~----d 442 (476)
+.. .-+..++++++|. ...|. ++|||+.+ +++++|||||||+|.+|.+||+|||+|++|++ +
T Consensus 83 ~~~~~~~~i~~~ld~~~~~~~~~~~~g~~~vKdL~~lw~~l~~~~~~~ntiiVDd~p~~~~~~P~N~i~I~~f~~~~~~~ 162 (195)
T TIGR02245 83 VLTNPNYKITFLLDSTAMITVHTPRRGKFDVKPLGVIWALLPEFYSMKNTIMFDDLRRNFLMNPQNGLKIRPFKKAHANR 162 (195)
T ss_pred ccCCccceEEEEeccccceeeEeeccCcEEEeecHHhhhhcccCCCcccEEEEeCCHHHHhcCCCCccccCCccccCCCC
Confidence 643 2345666778873 23444 59999987 34889999999999999999999999999985 5
Q ss_pred CChhHHHHHHHHHHhccCCCCchHHHHhhhC
Q 011867 443 PSDCALISLLPFLETLAAADDVRPIIAEKFS 473 (476)
Q Consensus 443 ~~D~eLl~Ll~fLe~La~~~DVR~~l~k~f~ 473 (476)
.+|.||++|++||+.|+.++|||++++++|.
T Consensus 163 ~~D~eL~~L~~yL~~la~~~Dvr~~~~~~w~ 193 (195)
T TIGR02245 163 GTDQELLKLTQYLKTIAELEDFSSLDHKEWE 193 (195)
T ss_pred cccHHHHHHHHHHHHHhcCcccchhhhcccc
Confidence 7999999999999999999999999999885
No 5
>KOG2832 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=99.97 E-value=3.6e-31 Score=268.22 Aligned_cols=156 Identities=31% Similarity=0.582 Sum_probs=147.8
Q ss_pred CCceEEEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhhcCceEEEEcCCchHHHHHHHHHhC
Q 011867 301 RKRVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVAEMFEIIVFTASESVYAEKLLDILD 380 (476)
Q Consensus 301 ~kKktLVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls~~yEIvIfTas~~~YA~~ILd~LD 380 (476)
++++||||+|.++|||..|.. ..++.+++|||++.||.+++++|||||||+....+|.++++.||
T Consensus 187 Qp~yTLVleledvLVhpdws~---------------~tGwRf~kRPgvD~FL~~~a~~yEIVi~sse~gmt~~pl~d~lD 251 (393)
T KOG2832|consen 187 QPPYTLVLELEDVLVHPDWSY---------------KTGWRFKKRPGVDYFLGHLAKYYEIVVYSSEQGMTVFPLLDALD 251 (393)
T ss_pred CCCceEEEEeeeeEeccchhh---------------hcCceeccCchHHHHHHhhcccceEEEEecCCccchhhhHhhcC
Confidence 899999999999999997742 25678899999999999999999999999999999999999999
Q ss_pred CCCceeeEEEecccceecCCcccccccccCCCCCcEEEEECChhhhccCCCceeeeeeecCCCChhHHHHHHHHHHhccC
Q 011867 381 PDRMLIARRAYRESCIFSDGSYAKDLTILGVDLARIAIIDNSPQVFRLQLDNGIPIKSWFDDPSDCALISLLPFLETLAA 460 (476)
Q Consensus 381 P~~k~F~~rL~Re~c~~~~g~yvKDLs~Lgrdl~~vIIIDDsp~~~~~qp~NgI~I~~f~~d~~D~eLl~Ll~fLe~La~ 460 (476)
|++ +++++|||++|.+.+|.++|||+.|+||+++||+||-.+..+.+||+|.|++++|.|+.+|..|.+|++||+.|+.
T Consensus 252 P~g-~IsYkLfr~~t~y~~G~HvKdls~LNRdl~kVivVd~d~~~~~l~P~N~l~l~~W~Gn~dDt~L~dL~~FL~~ia~ 330 (393)
T KOG2832|consen 252 PKG-YISYKLFRGATKYEEGHHVKDLSKLNRDLQKVIVVDFDANSYKLQPENMLPLEPWSGNDDDTSLFDLLAFLEYIAQ 330 (393)
T ss_pred Ccc-eEEEEEecCcccccCccchhhhhhhccccceeEEEEccccccccCcccccccCcCCCCcccchhhhHHHHHHHHHH
Confidence 996 8999999999999999999999999999999999999999999999999999999999999999999999999995
Q ss_pred --CCCchHHHHhhh
Q 011867 461 --ADDVRPIIAEKF 472 (476)
Q Consensus 461 --~~DVR~~l~k~f 472 (476)
++|||++|+.+-
T Consensus 331 ~~~eDvR~vL~~y~ 344 (393)
T KOG2832|consen 331 QQVEDVRPVLQSYS 344 (393)
T ss_pred ccHHHHHHHHHHhc
Confidence 699999997553
No 6
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=99.96 E-value=1.2e-29 Score=234.12 Aligned_cols=137 Identities=28% Similarity=0.464 Sum_probs=117.6
Q ss_pred CCceEEEEecccccccccCCCCCCCCce------------eEEEecceeeeEEEeeCchHHHHHHHhhcCceEEEEcCCc
Q 011867 301 RKRVTLVLDLDETLVHSSTEPCDDADFT------------FQVFFNMKEHTVYVRQRPFLRTFLERVAEMFEIIVFTASE 368 (476)
Q Consensus 301 ~kKktLVLDLDgTLVhS~~~~~~~~D~~------------~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls~~yEIvIfTas~ 368 (476)
++|++||||||+|||||...+....... -...|.......++++|||+++||+++++.|+++|||++.
T Consensus 4 ~~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~efL~~l~~~yel~I~T~~~ 83 (156)
T TIGR02250 4 EKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFLKEASKLYEMHVYTMGT 83 (156)
T ss_pred CCceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHHHHHHHhhcEEEEEeCCc
Confidence 6899999999999999988654332211 0123333467789999999999999999999999999999
Q ss_pred hHHHHHHHHHhCCCCceeeEEE-ecccceecCCccccccc-ccCCCCCcEEEEECChhhhccCCCceeeeeeec
Q 011867 369 SVYAEKLLDILDPDRMLIARRA-YRESCIFSDGSYAKDLT-ILGVDLARIAIIDNSPQVFRLQLDNGIPIKSWF 440 (476)
Q Consensus 369 ~~YA~~ILd~LDP~~k~F~~rL-~Re~c~~~~g~yvKDLs-~Lgrdl~~vIIIDDsp~~~~~qp~NgI~I~~f~ 440 (476)
+.||+++++.|||.+.+|.+|+ +|++|. +.++|||+ ++|+++++||||||+|.+|..||+|+|+|++|.
T Consensus 84 ~~yA~~vl~~ldp~~~~F~~ri~~rd~~~---~~~~KdL~~i~~~d~~~vvivDd~~~~~~~~~~N~i~i~~~~ 154 (156)
T TIGR02250 84 RAYAQAIAKLIDPDGKYFGDRIISRDESG---SPHTKSLLRLFPADESMVVIIDDREDVWPWHKRNLIQIEPYN 154 (156)
T ss_pred HHHHHHHHHHhCcCCCeeccEEEEeccCC---CCccccHHHHcCCCcccEEEEeCCHHHhhcCccCEEEeCCcc
Confidence 9999999999999988997765 599985 78999995 569999999999999999999999999999995
No 7
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=99.94 E-value=4.7e-26 Score=207.08 Aligned_cols=145 Identities=48% Similarity=0.876 Sum_probs=130.1
Q ss_pred CceEEEEecccccccccCCC---CCCCCceeEEEecceeeeEEEeeCchHHHHHHHhhcCceEEEEcCCchHHHHHHHHH
Q 011867 302 KRVTLVLDLDETLVHSSTEP---CDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVAEMFEIIVFTASESVYAEKLLDI 378 (476)
Q Consensus 302 kKktLVLDLDgTLVhS~~~~---~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls~~yEIvIfTas~~~YA~~ILd~ 378 (476)
+|++|||||||||+|+.... ....++...+.+......+++++|||+++||++|.+.|+++|||++.+.||+.+++.
T Consensus 1 ~k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~~~~~l~I~Ts~~~~~~~~il~~ 80 (148)
T smart00577 1 KKKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRASELFELVVFTAGLRMYADPVLDL 80 (148)
T ss_pred CCcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHHhccEEEEEeCCcHHHHHHHHHH
Confidence 58999999999999996422 222445566667778889999999999999999999999999999999999999999
Q ss_pred hCCCCceeeEEEecccceecCCcccccccccCCCCCcEEEEECChhhhccCCCceeeeeeecCCCChh
Q 011867 379 LDPDRMLIARRAYRESCIFSDGSYAKDLTILGVDLARIAIIDNSPQVFRLQLDNGIPIKSWFDDPSDC 446 (476)
Q Consensus 379 LDP~~k~F~~rL~Re~c~~~~g~yvKDLs~Lgrdl~~vIIIDDsp~~~~~qp~NgI~I~~f~~d~~D~ 446 (476)
+++.+.+|...+++++|...++.|.|+|+++|+++++||+|||++..|..++.|||+|++|.++++|+
T Consensus 81 l~~~~~~f~~i~~~~d~~~~KP~~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~~f~~~~~d~ 148 (148)
T smart00577 81 LDPKKYFGYRRLFRDECVFVKGKYVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIKPWFGDPDDT 148 (148)
T ss_pred hCcCCCEeeeEEECccccccCCeEeecHHHcCCChhcEEEEECCHHHhhcCccCEEEecCcCCCCCCC
Confidence 99976567999999999999888999999999999999999999999999999999999999998874
No 8
>COG5190 FCP1 TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=99.93 E-value=9.6e-27 Score=240.95 Aligned_cols=173 Identities=43% Similarity=0.718 Sum_probs=163.3
Q ss_pred CCceEEEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhhcCceEEEEcCCchHHHHHHHHHhC
Q 011867 301 RKRVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVAEMFEIIVFTASESVYAEKLLDILD 380 (476)
Q Consensus 301 ~kKktLVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls~~yEIvIfTas~~~YA~~ILd~LD 380 (476)
.++++|++|||+||+|+........+|...+......+.+||..||++++||..++++|++++||++.+.||+++++.|+
T Consensus 210 ~~~k~L~l~lde~l~~S~~~~~~~~df~~~~e~~~~~~~~~v~kRp~l~~fl~~ls~~~~l~~ft~s~~~y~~~v~d~l~ 289 (390)
T COG5190 210 SPKKTLVLDLDETLVHSSFRYITLLDFLVKVEISLLQHLVYVSKRPELDYFLGKLSKIHELVYFTASVKRYADPVLDILD 289 (390)
T ss_pred CCccccccCCCccceeeccccccccchhhccccccceeEEEEcCChHHHHHHhhhhhhEEEEEEecchhhhcchHHHhcc
Confidence 78899999999999999998887888877777777778999999999999999999999999999999999999999999
Q ss_pred CCCceeeEEEecccceecCCcccccccccCCCCCcEEEEECChhhhccCCCceeeeeeecCCCChhHHHHHHHHHHhccC
Q 011867 381 PDRMLIARRAYRESCIFSDGSYAKDLTILGVDLARIAIIDNSPQVFRLQLDNGIPIKSWFDDPSDCALISLLPFLETLAA 460 (476)
Q Consensus 381 P~~k~F~~rL~Re~c~~~~g~yvKDLs~Lgrdl~~vIIIDDsp~~~~~qp~NgI~I~~f~~d~~D~eLl~Ll~fLe~La~ 460 (476)
+.+ .|.+++||++|....|.|+|||.++++++.+|||||++|..|.++|+|+|+|++|.+++.|.+|++|++||+.|..
T Consensus 290 ~~k-~~~~~lfr~sc~~~~G~~ikDis~i~r~l~~viiId~~p~SY~~~p~~~i~i~~W~~d~~d~el~~ll~~le~L~~ 368 (390)
T COG5190 290 SDK-VFSHRLFRESCVSYLGVYIKDISKIGRSLDKVIIIDNSPASYEFHPENAIPIEKWISDEHDDELLNLLPFLEDLPD 368 (390)
T ss_pred ccc-eeehhhhcccceeccCchhhhHHhhccCCCceEEeeCChhhhhhCccceeccCcccccccchhhhhhccccccccc
Confidence 998 8999999999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred --CCCchHHHHhhhCC
Q 011867 461 --ADDVRPIIAEKFSI 474 (476)
Q Consensus 461 --~~DVR~~l~k~f~~ 474 (476)
..||+..+..+-+.
T Consensus 369 ~~~~d~~~~l~~~~~~ 384 (390)
T COG5190 369 RDLKDVSSILQSRLEK 384 (390)
T ss_pred ccchhhhhhhhhhhHh
Confidence 79999998766543
No 9
>KOG0323 consensus TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=99.75 E-value=3.5e-18 Score=186.05 Aligned_cols=136 Identities=29% Similarity=0.414 Sum_probs=108.1
Q ss_pred CceEEEEecccccccccCCCCCC---------CC--ce----eEEEecceeeeEEEeeCchHHHHHHHhhcCceEEEEcC
Q 011867 302 KRVTLVLDLDETLVHSSTEPCDD---------AD--FT----FQVFFNMKEHTVYVRQRPFLRTFLERVAEMFEIIVFTA 366 (476)
Q Consensus 302 kKktLVLDLDgTLVhS~~~~~~~---------~D--~~----~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls~~yEIvIfTa 366 (476)
+++.||+|||.||+|+....... .. .. +.+..-.....+||++|||+++||+++++.|||+|||.
T Consensus 145 ~~L~lv~Dld~tllh~~~~~~l~e~~~~l~~~~~~~~sn~dl~~~~~~~~~~~~~vKlRP~~~efL~~~sklfemhVyTm 224 (635)
T KOG0323|consen 145 KKLHLVLDLDHTLLHTILKSDLSETEKYLKEEAESVESNKDLFRFNPLGHDTEYLVKLRPFVHEFLKEANKLFEMHVYTM 224 (635)
T ss_pred hcceeehhhhhHHHHhhccchhhhhhhhcccccccccccccceeecccCCCceEEEEeCccHHHHHHHHHhhceeEEEec
Confidence 34699999999999997632110 00 00 11111134457999999999999999999999999999
Q ss_pred CchHHHHHHHHHhCCCCceeeEEEe-cccceecCCccccccccc-CCCCCcEEEEECChhhhccCCCceeeeeeec
Q 011867 367 SESVYAEKLLDILDPDRMLIARRAY-RESCIFSDGSYAKDLTIL-GVDLARIAIIDNSPQVFRLQLDNGIPIKSWF 440 (476)
Q Consensus 367 s~~~YA~~ILd~LDP~~k~F~~rL~-Re~c~~~~g~yvKDLs~L-grdl~~vIIIDDsp~~~~~qp~NgI~I~~f~ 440 (476)
|.+.||..|++.|||.++||++|++ |+. ....-++||..+ .++.++||||||++.+|..++.|.|.|.+|.
T Consensus 225 g~R~YA~~i~~liDP~~~lF~dRIisrde---~~~~kt~dL~~~~p~g~smvvIIDDr~dVW~~~~~nLI~i~~y~ 297 (635)
T KOG0323|consen 225 GTRDYALEIAKLIDPEGKYFGDRIISRDE---SPFFKTLDLVLLFPCGDSMVVIIDDRSDVWPDHKRNLIQIAPYP 297 (635)
T ss_pred cchHHHHHHHHHhCCCCccccceEEEecC---CCcccccccccCCCCCCccEEEEeCccccccCCCcceEEeeeee
Confidence 9999999999999999999999997 655 233445666665 5778889999999999999999999999994
No 10
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=98.67 E-value=7.1e-08 Score=91.17 Aligned_cols=136 Identities=13% Similarity=0.050 Sum_probs=93.7
Q ss_pred eEEEEecccccccccCCCCCC-----CCceeEEEecceeeeEEEeeCchHHHHHHHhh-cCceEEEEcCC-chHHHHHHH
Q 011867 304 VTLVLDLDETLVHSSTEPCDD-----ADFTFQVFFNMKEHTVYVRQRPFLRTFLERVA-EMFEIIVFTAS-ESVYAEKLL 376 (476)
Q Consensus 304 ktLVLDLDgTLVhS~~~~~~~-----~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls-~~yEIvIfTas-~~~YA~~IL 376 (476)
+++|||||+||.....-.... .+-...+. .......+.++||+.++|+.|. +++.+.|.|++ ...+++.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L 80 (174)
T TIGR01685 3 RVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSII--IDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEIL 80 (174)
T ss_pred cEEEEeCCCCCcCcccccccCCCceeccCCCCeE--EeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHH
Confidence 579999999997664321111 11100000 1223446778999999999998 78999999988 999999999
Q ss_pred HHhCCC--C------ceeeEEEecccceecCC--ccccccccc---CCCCCcEEEEECChhhhccCCCceeeeeeecC
Q 011867 377 DILDPD--R------MLIARRAYRESCIFSDG--SYAKDLTIL---GVDLARIAIIDNSPQVFRLQLDNGIPIKSWFD 441 (476)
Q Consensus 377 d~LDP~--~------k~F~~rL~Re~c~~~~g--~yvKDLs~L---grdl~~vIIIDDsp~~~~~qp~NgI~I~~f~~ 441 (476)
+.++.. + .+|..++..+.....+. ...+.+... |.+++++++|||++........+|+.+--...
T Consensus 81 ~~~~l~~~~~~~~~~~~Fd~iv~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~v~~ 158 (174)
T TIGR01685 81 GTFEITYAGKTVPMHSLFDDRIEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCYCPS 158 (174)
T ss_pred HhCCcCCCCCcccHHHhceeeeeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEEcCC
Confidence 999865 1 47888887554321111 112333222 58899999999999988877788998876643
No 11
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=98.64 E-value=1.5e-08 Score=100.89 Aligned_cols=99 Identities=16% Similarity=0.160 Sum_probs=85.4
Q ss_pred EeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHhCCCCceeeEEEecccceecCC---cccccccccCCCCCcEE
Q 011867 342 VRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDILDPDRMLIARRAYRESCIFSDG---SYAKDLTILGVDLARIA 417 (476)
Q Consensus 342 Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~LDP~~k~F~~rL~Re~c~~~~g---~yvKDLs~Lgrdl~~vI 417 (476)
+.++||+.++|+.|. +++.++|.|++...++..+++.++... +|...+..+.+...|+ .|.+.+.++|.+++++|
T Consensus 108 ~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~-~Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~~~p~~~l 186 (260)
T PLN03243 108 YRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEG-FFSVVLAAEDVYRGKPDPEMFMYAAERLGFIPERCI 186 (260)
T ss_pred cccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHh-hCcEEEecccCCCCCCCHHHHHHHHHHhCCChHHeE
Confidence 567899999999999 679999999999999999999998765 8999999888766665 67899999999999999
Q ss_pred EEECChhhhccCCCceeeeeeecC
Q 011867 418 IIDNSPQVFRLQLDNGIPIKSWFD 441 (476)
Q Consensus 418 IIDDsp~~~~~qp~NgI~I~~f~~ 441 (476)
+|+|++.........|+......+
T Consensus 187 ~IgDs~~Di~aA~~aG~~~i~v~g 210 (260)
T PLN03243 187 VFGNSNSSVEAAHDGCMKCVAVAG 210 (260)
T ss_pred EEcCCHHHHHHHHHcCCEEEEEec
Confidence 999999988777677887665443
No 12
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=98.61 E-value=3.3e-08 Score=88.15 Aligned_cols=108 Identities=17% Similarity=0.121 Sum_probs=78.0
Q ss_pred eEEEEecccccccccC---CCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cCceEEEEcCC-chHHHHHHHHH
Q 011867 304 VTLVLDLDETLVHSST---EPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVA-EMFEIIVFTAS-ESVYAEKLLDI 378 (476)
Q Consensus 304 ktLVLDLDgTLVhS~~---~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls-~~yEIvIfTas-~~~YA~~ILd~ 378 (476)
+.+|+||||||..... ......+. . .+.||+.++|++++ +++.++|.|++ .+.++..+++.
T Consensus 1 kli~~DlD~Tl~~~~~~~~~~~~~~~~--------~------~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~ 66 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVVGEDPIIDL--------E------VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKI 66 (128)
T ss_pred CEEEEeCCCCCCCCCcccccCCcchhh--------H------HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHh
Confidence 4789999999997621 11000000 0 47899999999998 68999999999 89999999998
Q ss_pred hCC------CCceeeEEEecccceecCCcccccccccC--CCCCcEEEEECChhhh
Q 011867 379 LDP------DRMLIARRAYRESCIFSDGSYAKDLTILG--VDLARIAIIDNSPQVF 426 (476)
Q Consensus 379 LDP------~~k~F~~rL~Re~c~~~~g~yvKDLs~Lg--rdl~~vIIIDDsp~~~ 426 (476)
+++ -.++|...+..++.. ....|.+-+.++| ..++++++|||++...
T Consensus 67 ~~~~~~i~~l~~~f~~~~~~~~~p-kp~~~~~a~~~lg~~~~p~~~l~igDs~~n~ 121 (128)
T TIGR01681 67 FEDFGIIFPLAEYFDPLTIGYWLP-KSPRLVEIALKLNGVLKPKSILFVDDRPDNN 121 (128)
T ss_pred ccccccchhhHhhhhhhhhcCCCc-HHHHHHHHHHHhcCCCCcceEEEECCCHhHH
Confidence 772 123566555543321 1125777888889 9999999999999764
No 13
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=98.58 E-value=3.6e-08 Score=96.78 Aligned_cols=98 Identities=14% Similarity=0.216 Sum_probs=84.6
Q ss_pred EEeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHhCCCCceeeEEEecccceecCC---cccccccccCCCCCcE
Q 011867 341 YVRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDILDPDRMLIARRAYRESCIFSDG---SYAKDLTILGVDLARI 416 (476)
Q Consensus 341 ~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~LDP~~k~F~~rL~Re~c~~~~g---~yvKDLs~Lgrdl~~v 416 (476)
.+.+.||+.++|++|. +.+.++|.|++.+.+++.+++.++..+ +|...+..+.+...++ .|.+-+.++|.+++++
T Consensus 106 ~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~-~Fd~iv~~~~~~~~KP~p~~~~~a~~~~~~~~~~~ 184 (248)
T PLN02770 106 QLKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSD-FFQAVIIGSECEHAKPHPDPYLKALEVLKVSKDHT 184 (248)
T ss_pred cCCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChh-hCcEEEecCcCCCCCCChHHHHHHHHHhCCChhHE
Confidence 3567899999999997 679999999999999999999999875 8999998888766665 6788899999999999
Q ss_pred EEEECChhhhccCCCceeeeeee
Q 011867 417 AIIDNSPQVFRLQLDNGIPIKSW 439 (476)
Q Consensus 417 IIIDDsp~~~~~qp~NgI~I~~f 439 (476)
++|+|++.-......+|++.-..
T Consensus 185 l~vgDs~~Di~aA~~aGi~~i~v 207 (248)
T PLN02770 185 FVFEDSVSGIKAGVAAGMPVVGL 207 (248)
T ss_pred EEEcCCHHHHHHHHHCCCEEEEE
Confidence 99999998776666778877644
No 14
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=98.57 E-value=2.1e-08 Score=97.28 Aligned_cols=99 Identities=17% Similarity=0.182 Sum_probs=89.3
Q ss_pred EeeCchHHHHHHHhhcC-ceEEEEcCCchHHHHHHHHHhCCCCceeeEEEecccceecCC---cccccccccCCCCCcEE
Q 011867 342 VRQRPFLRTFLERVAEM-FEIIVFTASESVYAEKLLDILDPDRMLIARRAYRESCIFSDG---SYAKDLTILGVDLARIA 417 (476)
Q Consensus 342 Vk~RPgl~eFL~~Ls~~-yEIvIfTas~~~YA~~ILd~LDP~~k~F~~rL~Re~c~~~~g---~yvKDLs~Lgrdl~~vI 417 (476)
++..||+.+||+.|.+. ..+++.|++.+..+..+++.++... +|..++++++....|+ .|.+.+++||.++++||
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~-~f~~~v~~~dv~~~KP~Pd~yL~Aa~~Lgv~P~~Cv 163 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLD-YFDVIVTADDVARGKPAPDIYLLAAERLGVDPEECV 163 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChh-hcchhccHHHHhcCCCCCHHHHHHHHHcCCChHHeE
Confidence 67899999999999955 9999999999999999999999886 8999999999888876 79999999999999999
Q ss_pred EEECChhhhccCCCceeeeeeecC
Q 011867 418 IIDNSPQVFRLQLDNGIPIKSWFD 441 (476)
Q Consensus 418 IIDDsp~~~~~qp~NgI~I~~f~~ 441 (476)
+|||++.....-..-|+.+-.+.+
T Consensus 164 viEDs~~Gi~Aa~aAGm~vv~v~~ 187 (221)
T COG0637 164 VVEDSPAGIQAAKAAGMRVVGVPA 187 (221)
T ss_pred EEecchhHHHHHHHCCCEEEEecC
Confidence 999999988776667888877765
No 15
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=98.56 E-value=4.6e-08 Score=92.96 Aligned_cols=97 Identities=11% Similarity=0.105 Sum_probs=82.0
Q ss_pred EEeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHhCCCCceeeEEEecccceecCC---cccccccccCCCCCcE
Q 011867 341 YVRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDILDPDRMLIARRAYRESCIFSDG---SYAKDLTILGVDLARI 416 (476)
Q Consensus 341 ~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~LDP~~k~F~~rL~Re~c~~~~g---~yvKDLs~Lgrdl~~v 416 (476)
.+...||+.++|+.+. +.+.++|.|++.+.++..+++.++-.. +|...+..+.+...++ .|.+-+..++.+++++
T Consensus 80 ~~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~-~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~ 158 (214)
T PRK13288 80 LVTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDE-FFDVVITLDDVEHAKPDPEPVLKALELLGAKPEEA 158 (214)
T ss_pred hcccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChh-ceeEEEecCcCCCCCCCcHHHHHHHHHcCCCHHHE
Confidence 4567899999999998 679999999999999999999998875 8999888777765543 5677788889999999
Q ss_pred EEEECChhhhccCCCceeeeee
Q 011867 417 AIIDNSPQVFRLQLDNGIPIKS 438 (476)
Q Consensus 417 IIIDDsp~~~~~qp~NgI~I~~ 438 (476)
++|+|++.-+.....+|++...
T Consensus 159 ~~iGDs~~Di~aa~~aG~~~i~ 180 (214)
T PRK13288 159 LMVGDNHHDILAGKNAGTKTAG 180 (214)
T ss_pred EEECCCHHHHHHHHHCCCeEEE
Confidence 9999999877766677887554
No 16
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=98.54 E-value=6.3e-08 Score=93.86 Aligned_cols=93 Identities=16% Similarity=0.111 Sum_probs=80.0
Q ss_pred EeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHhCCCCceeeEEEecccceecCC---cccccccccCCCCCcEE
Q 011867 342 VRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDILDPDRMLIARRAYRESCIFSDG---SYAKDLTILGVDLARIA 417 (476)
Q Consensus 342 Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~LDP~~k~F~~rL~Re~c~~~~g---~yvKDLs~Lgrdl~~vI 417 (476)
+...||+.++|+.+. +++.++|.|++.+.++...++.++-.. +|...+..++....|+ .|.+-++++|.++++++
T Consensus 92 ~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~-~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l 170 (224)
T PRK14988 92 AVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDA-HLDLLLSTHTFGYPKEDQRLWQAVAEHTGLKAERTL 170 (224)
T ss_pred CCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHH-HCCEEEEeeeCCCCCCCHHHHHHHHHHcCCChHHEE
Confidence 567899999999999 579999999999999999999987654 8998888776655554 57888899999999999
Q ss_pred EEECChhhhccCCCceee
Q 011867 418 IIDNSPQVFRLQLDNGIP 435 (476)
Q Consensus 418 IIDDsp~~~~~qp~NgI~ 435 (476)
+|+|++........+|+.
T Consensus 171 ~igDs~~di~aA~~aG~~ 188 (224)
T PRK14988 171 FIDDSEPILDAAAQFGIR 188 (224)
T ss_pred EEcCCHHHHHHHHHcCCe
Confidence 999999988776678886
No 17
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=98.50 E-value=4.8e-08 Score=90.44 Aligned_cols=95 Identities=17% Similarity=0.183 Sum_probs=79.0
Q ss_pred EeeCchHHHHHHHhhcCceEEEEcCCchHHHHHHHHHhCCCCceeeEEEecccceecCC---cccccccccCCCCCcEEE
Q 011867 342 VRQRPFLRTFLERVAEMFEIIVFTASESVYAEKLLDILDPDRMLIARRAYRESCIFSDG---SYAKDLTILGVDLARIAI 418 (476)
Q Consensus 342 Vk~RPgl~eFL~~Ls~~yEIvIfTas~~~YA~~ILd~LDP~~k~F~~rL~Re~c~~~~g---~yvKDLs~Lgrdl~~vII 418 (476)
+..-|+ .+.|+.+.+.+.++|.|++.+.+++.+++.++-.+ +|...+..+++...++ .|.+.++++|.++++||+
T Consensus 87 ~~~~~~-~e~L~~L~~~~~l~I~T~~~~~~~~~~l~~~~l~~-~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~ 164 (188)
T PRK10725 87 VEPLPL-IEVVKAWHGRRPMAVGTGSESAIAEALLAHLGLRR-YFDAVVAADDVQHHKPAPDTFLRCAQLMGVQPTQCVV 164 (188)
T ss_pred CCCccH-HHHHHHHHhCCCEEEEcCCchHHHHHHHHhCCcHh-HceEEEehhhccCCCCChHHHHHHHHHcCCCHHHeEE
Confidence 345676 48899998779999999999999999999998765 8999888888766665 577888899999999999
Q ss_pred EECChhhhccCCCceeeeee
Q 011867 419 IDNSPQVFRLQLDNGIPIKS 438 (476)
Q Consensus 419 IDDsp~~~~~qp~NgI~I~~ 438 (476)
|+|++.-+.....+|++.-.
T Consensus 165 igDs~~di~aA~~aG~~~i~ 184 (188)
T PRK10725 165 FEDADFGIQAARAAGMDAVD 184 (188)
T ss_pred EeccHhhHHHHHHCCCEEEe
Confidence 99999888776667776543
No 18
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=98.50 E-value=8.9e-08 Score=100.56 Aligned_cols=98 Identities=11% Similarity=0.061 Sum_probs=84.8
Q ss_pred EeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHhCCCCceeeEEEecccceecCC---cccccccccCCCCCcEE
Q 011867 342 VRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDILDPDRMLIARRAYRESCIFSDG---SYAKDLTILGVDLARIA 417 (476)
Q Consensus 342 Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~LDP~~k~F~~rL~Re~c~~~~g---~yvKDLs~Lgrdl~~vI 417 (476)
+...||+.+||+.|. +++.++|.|++.+.+++.+++.++..+ ||...+..+++...++ .|.+.+..+|.++++||
T Consensus 215 ~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~-yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~Peecl 293 (381)
T PLN02575 215 YRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRG-FFSVIVAAEDVYRGKPDPEMFIYAAQLLNFIPERCI 293 (381)
T ss_pred CCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHH-HceEEEecCcCCCCCCCHHHHHHHHHHcCCCcccEE
Confidence 457899999999998 679999999999999999999998775 8999999888766665 67889999999999999
Q ss_pred EEECChhhhccCCCceeeeeeec
Q 011867 418 IIDNSPQVFRLQLDNGIPIKSWF 440 (476)
Q Consensus 418 IIDDsp~~~~~qp~NgI~I~~f~ 440 (476)
+|+|++..+......|+......
T Consensus 294 ~IGDS~~DIeAAk~AGm~~IgV~ 316 (381)
T PLN02575 294 VFGNSNQTVEAAHDARMKCVAVA 316 (381)
T ss_pred EEcCCHHHHHHHHHcCCEEEEEC
Confidence 99999998876666777666554
No 19
>PRK11587 putative phosphatase; Provisional
Probab=98.50 E-value=1.2e-07 Score=90.90 Aligned_cols=98 Identities=11% Similarity=0.041 Sum_probs=78.9
Q ss_pred EEeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHhCCCCceeeEEEecccceecCC---cccccccccCCCCCcE
Q 011867 341 YVRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDILDPDRMLIARRAYRESCIFSDG---SYAKDLTILGVDLARI 416 (476)
Q Consensus 341 ~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~LDP~~k~F~~rL~Re~c~~~~g---~yvKDLs~Lgrdl~~v 416 (476)
.+...||+.++|+.|. +.+.++|.|++...++..+++..+.. +|...+..++....++ .|.+.+..+|..++++
T Consensus 81 ~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~--~~~~i~~~~~~~~~KP~p~~~~~~~~~~g~~p~~~ 158 (218)
T PRK11587 81 GITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLP--APEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQEC 158 (218)
T ss_pred CceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCC--CccEEEEHHHhcCCCCCcHHHHHHHHHcCCCcccE
Confidence 3567999999999998 77999999999999888888877653 4666666766655554 6788889999999999
Q ss_pred EEEECChhhhccCCCceeeeeeec
Q 011867 417 AIIDNSPQVFRLQLDNGIPIKSWF 440 (476)
Q Consensus 417 IIIDDsp~~~~~qp~NgI~I~~f~ 440 (476)
|+|+|++.........|++...+.
T Consensus 159 l~igDs~~di~aA~~aG~~~i~v~ 182 (218)
T PRK11587 159 VVVEDAPAGVLSGLAAGCHVIAVN 182 (218)
T ss_pred EEEecchhhhHHHHHCCCEEEEEC
Confidence 999999987776666787755554
No 20
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=98.50 E-value=1.6e-07 Score=94.32 Aligned_cols=96 Identities=8% Similarity=0.073 Sum_probs=74.3
Q ss_pred EeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHhCCCCceeeEEEecccceecCCcccccccccCCCCCcEEEEE
Q 011867 342 VRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDILDPDRMLIARRAYRESCIFSDGSYAKDLTILGVDLARIAIID 420 (476)
Q Consensus 342 Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~LDP~~k~F~~rL~Re~c~~~~g~yvKDLs~Lgrdl~~vIIID 420 (476)
+...||+.++|+.|. +.+.++|.|++...+++.+++.++... +|...+..+........+.+-+.+++.+++++++|+
T Consensus 141 ~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~-~F~~vi~~~~~~~k~~~~~~~l~~~~~~p~~~l~IG 219 (273)
T PRK13225 141 LQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRS-LFSVVQAGTPILSKRRALSQLVAREGWQPAAVMYVG 219 (273)
T ss_pred CCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChh-heEEEEecCCCCCCHHHHHHHHHHhCcChhHEEEEC
Confidence 456899999999998 679999999999999999999998765 788766544322112245555667788999999999
Q ss_pred CChhhhccCCCceeeeee
Q 011867 421 NSPQVFRLQLDNGIPIKS 438 (476)
Q Consensus 421 Dsp~~~~~qp~NgI~I~~ 438 (476)
|++.-...-...|+....
T Consensus 220 Ds~~Di~aA~~AG~~~I~ 237 (273)
T PRK13225 220 DETRDVEAARQVGLIAVA 237 (273)
T ss_pred CCHHHHHHHHHCCCeEEE
Confidence 999877655556776543
No 21
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=98.47 E-value=7.3e-08 Score=90.77 Aligned_cols=98 Identities=14% Similarity=0.103 Sum_probs=81.0
Q ss_pred EEeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHhCCCCceeeEEEecccceecCC---cccccccccCCCCCcE
Q 011867 341 YVRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDILDPDRMLIARRAYRESCIFSDG---SYAKDLTILGVDLARI 416 (476)
Q Consensus 341 ~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~LDP~~k~F~~rL~Re~c~~~~g---~yvKDLs~Lgrdl~~v 416 (476)
.+.++||+.++|+.+. +.+.++|.|++...+++.+++.++-.+ +|...+..+.....++ .|.+-++.+|.+++++
T Consensus 83 ~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~-~f~~~~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~ 161 (213)
T TIGR01449 83 LTSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAK-YFSVLIGGDSLAQRKPHPDPLLLAAERLGVAPQQM 161 (213)
T ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHh-hCcEEEecCCCCCCCCChHHHHHHHHHcCCChhHe
Confidence 3578999999999998 679999999999999999999998765 7887777665544443 5778888999999999
Q ss_pred EEEECChhhhccCCCceeeeeee
Q 011867 417 AIIDNSPQVFRLQLDNGIPIKSW 439 (476)
Q Consensus 417 IIIDDsp~~~~~qp~NgI~I~~f 439 (476)
++|+|++.-+..-...|++.-..
T Consensus 162 ~~igDs~~d~~aa~~aG~~~i~v 184 (213)
T TIGR01449 162 VYVGDSRVDIQAARAAGCPSVLL 184 (213)
T ss_pred EEeCCCHHHHHHHHHCCCeEEEE
Confidence 99999998776665677776544
No 22
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=98.45 E-value=8e-08 Score=90.73 Aligned_cols=98 Identities=13% Similarity=0.068 Sum_probs=81.3
Q ss_pred EEeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHhCCCCceeeEEEecccceecCC---cccccccccCCCCCcE
Q 011867 341 YVRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDILDPDRMLIARRAYRESCIFSDG---SYAKDLTILGVDLARI 416 (476)
Q Consensus 341 ~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~LDP~~k~F~~rL~Re~c~~~~g---~yvKDLs~Lgrdl~~v 416 (476)
.+...||+.++|+++. +.+.++|.|.+...++..+++.++..+ +|...+..+++...++ .|.+-++++|.+++++
T Consensus 73 ~~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~-~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~ 151 (205)
T TIGR01454 73 EVEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLP-LFDHVIGSDEVPRPKPAPDIVREALRLLDVPPEDA 151 (205)
T ss_pred ccccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChh-heeeEEecCcCCCCCCChHHHHHHHHHcCCChhhe
Confidence 4677999999999998 679999999999999999999998876 8888887776654443 5667778889999999
Q ss_pred EEEECChhhhccCCCceeeeeee
Q 011867 417 AIIDNSPQVFRLQLDNGIPIKSW 439 (476)
Q Consensus 417 IIIDDsp~~~~~qp~NgI~I~~f 439 (476)
++|+|++.-+.....+|++....
T Consensus 152 l~igD~~~Di~aA~~~Gi~~i~~ 174 (205)
T TIGR01454 152 VMVGDAVTDLASARAAGTATVAA 174 (205)
T ss_pred EEEcCCHHHHHHHHHcCCeEEEE
Confidence 99999998776666778876543
No 23
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=98.43 E-value=1.3e-07 Score=91.47 Aligned_cols=96 Identities=11% Similarity=0.012 Sum_probs=78.9
Q ss_pred EEeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHhCCCCceeeEEEecccceecCC---cccccccccCCCCCcE
Q 011867 341 YVRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDILDPDRMLIARRAYRESCIFSDG---SYAKDLTILGVDLARI 416 (476)
Q Consensus 341 ~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~LDP~~k~F~~rL~Re~c~~~~g---~yvKDLs~Lgrdl~~v 416 (476)
.+...||+.++|+.|. +.+.++|.|++...++..+++.++... +|...+..+++...|+ .|.+-++++|.+++++
T Consensus 93 ~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~-~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~ 171 (229)
T PRK13226 93 QSQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQ-RCAVLIGGDTLAERKPHPLPLLVAAERIGVAPTDC 171 (229)
T ss_pred cCeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchh-cccEEEecCcCCCCCCCHHHHHHHHHHhCCChhhE
Confidence 4678999999999998 569999999999999999999998765 7877777666655554 4778888999999999
Q ss_pred EEEECChhhhccCCCceeeee
Q 011867 417 AIIDNSPQVFRLQLDNGIPIK 437 (476)
Q Consensus 417 IIIDDsp~~~~~qp~NgI~I~ 437 (476)
++|+|++.-...-...|+...
T Consensus 172 l~IGDs~~Di~aA~~aG~~~i 192 (229)
T PRK13226 172 VYVGDDERDILAARAAGMPSV 192 (229)
T ss_pred EEeCCCHHHHHHHHHCCCcEE
Confidence 999999987766556677654
No 24
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=98.36 E-value=1.6e-07 Score=87.19 Aligned_cols=92 Identities=23% Similarity=0.276 Sum_probs=74.7
Q ss_pred EeeCchHHHHHHHhhcCceEEEEcCCchHHHHHHHHHhCCCCceeeEEEeccccee----cCC---cccccccccCCCCC
Q 011867 342 VRQRPFLRTFLERVAEMFEIIVFTASESVYAEKLLDILDPDRMLIARRAYRESCIF----SDG---SYAKDLTILGVDLA 414 (476)
Q Consensus 342 Vk~RPgl~eFL~~Ls~~yEIvIfTas~~~YA~~ILd~LDP~~k~F~~rL~Re~c~~----~~g---~yvKDLs~Lgrdl~ 414 (476)
++..||+.++|+.|. +.++|+|++...++..+++.++... +|...+..+.... .|+ .|.+-++++|.+++
T Consensus 83 ~~~~~g~~~~L~~L~--~~~~i~Tn~~~~~~~~~l~~~gl~~-~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~ 159 (184)
T TIGR01993 83 LKPDPELRNLLLRLP--GRKIIFTNGDRAHARRALNRLGIED-CFDGIFCFDTANPDYLLPKPSPQAYEKALREAGVDPE 159 (184)
T ss_pred CCCCHHHHHHHHhCC--CCEEEEeCCCHHHHHHHHHHcCcHh-hhCeEEEeecccCccCCCCCCHHHHHHHHHHhCCCcc
Confidence 456799999999998 6899999999999999999998764 8998888766543 233 67788888999999
Q ss_pred cEEEEECChhhhccCCCceeee
Q 011867 415 RIAIIDNSPQVFRLQLDNGIPI 436 (476)
Q Consensus 415 ~vIIIDDsp~~~~~qp~NgI~I 436 (476)
++++|+|++.........|++.
T Consensus 160 ~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 160 RAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred ceEEEeCCHHHHHHHHHcCCEE
Confidence 9999999998765555566653
No 25
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=98.35 E-value=4.1e-07 Score=88.94 Aligned_cols=98 Identities=10% Similarity=-0.012 Sum_probs=81.3
Q ss_pred EeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHhCCCCcee-eEEEecccceecCC---cccccccccCC-CCCc
Q 011867 342 VRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDILDPDRMLI-ARRAYRESCIFSDG---SYAKDLTILGV-DLAR 415 (476)
Q Consensus 342 Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~LDP~~k~F-~~rL~Re~c~~~~g---~yvKDLs~Lgr-dl~~ 415 (476)
+.+.||+.++|++|. +.+.++|.|++...+++.+++.++..+ +| ...+..+.....++ .|.+.++++|. ++++
T Consensus 98 ~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~-~f~d~ii~~~~~~~~KP~p~~~~~a~~~l~~~~~~~ 176 (253)
T TIGR01422 98 SSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQG-YRPDYNVTTDDVPAGRPAPWMALKNAIELGVYDVAA 176 (253)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcC-CCCceEEccccCCCCCCCHHHHHHHHHHcCCCCchh
Confidence 567899999999998 679999999999999999999998776 54 77777776655554 67888889998 4999
Q ss_pred EEEEECChhhhccCCCceeeeeeec
Q 011867 416 IAIIDNSPQVFRLQLDNGIPIKSWF 440 (476)
Q Consensus 416 vIIIDDsp~~~~~qp~NgI~I~~f~ 440 (476)
+|+|.|++.-+......|+......
T Consensus 177 ~l~IGDs~~Di~aA~~aGi~~i~v~ 201 (253)
T TIGR01422 177 CVKVGDTVPDIEEGRNAGMWTVGLI 201 (253)
T ss_pred eEEECCcHHHHHHHHHCCCeEEEEe
Confidence 9999999998877767788776653
No 26
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=98.32 E-value=1.9e-07 Score=85.86 Aligned_cols=92 Identities=13% Similarity=0.158 Sum_probs=74.8
Q ss_pred EeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHhCCCCceeeEEEecccceecCC---cccccccccCCCCCcEE
Q 011867 342 VRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDILDPDRMLIARRAYRESCIFSDG---SYAKDLTILGVDLARIA 417 (476)
Q Consensus 342 Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~LDP~~k~F~~rL~Re~c~~~~g---~yvKDLs~Lgrdl~~vI 417 (476)
+...||+.++|+.+. ..+.++|.|++ .+++.+++.++-.+ +|..++..+.....++ .|.+-++.++..++++|
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~-~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v 163 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTD-YFDAIVDADEVKEGKPHPETFLLAAELLGVSPNECV 163 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHH-HCCEeeehhhCCCCCCChHHHHHHHHHcCCCHHHeE
Confidence 578999999999998 56999999988 78999999888765 7888887766654444 46777888899999999
Q ss_pred EEECChhhhccCCCceeee
Q 011867 418 IIDNSPQVFRLQLDNGIPI 436 (476)
Q Consensus 418 IIDDsp~~~~~qp~NgI~I 436 (476)
+|+|++.-......+|++.
T Consensus 164 ~IgD~~~di~aA~~~G~~~ 182 (185)
T TIGR02009 164 VFEDALAGVQAARAAGMFA 182 (185)
T ss_pred EEeCcHhhHHHHHHCCCeE
Confidence 9999998776655667654
No 27
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=98.32 E-value=3.9e-07 Score=87.27 Aligned_cols=101 Identities=18% Similarity=0.071 Sum_probs=84.5
Q ss_pred EeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHhCCCCceeeEEEecccceecCC---cccccccccCCCCCcEE
Q 011867 342 VRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDILDPDRMLIARRAYRESCIFSDG---SYAKDLTILGVDLARIA 417 (476)
Q Consensus 342 Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~LDP~~k~F~~rL~Re~c~~~~g---~yvKDLs~Lgrdl~~vI 417 (476)
..+.||+.++|+.+. +.+.++|.|++....++.+++.++..+ +|...+.++.....++ .|..-+..+|.++++++
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~-~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~ 169 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRD-YFDALASAEKLPYSKPHPEVYLNCAAKLGVDPLTCV 169 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchh-cccEEEEcccCCCCCCCHHHHHHHHHHcCCCHHHeE
Confidence 467899999999998 679999999999999999999998765 8988888776655544 67788888999999999
Q ss_pred EEECChhhhccCCCceeeeeeecCCC
Q 011867 418 IIDNSPQVFRLQLDNGIPIKSWFDDP 443 (476)
Q Consensus 418 IIDDsp~~~~~qp~NgI~I~~f~~d~ 443 (476)
+|+|++.-...-...|++..-+....
T Consensus 170 ~igDs~~Di~aA~~aG~~~i~v~~~~ 195 (222)
T PRK10826 170 ALEDSFNGMIAAKAARMRSIVVPAPE 195 (222)
T ss_pred EEcCChhhHHHHHHcCCEEEEecCCc
Confidence 99999998877767888876665443
No 28
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=98.31 E-value=5.4e-07 Score=85.76 Aligned_cols=95 Identities=13% Similarity=0.134 Sum_probs=78.1
Q ss_pred EeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHhCCCC-ceeeEEEecccceecCC---cccccccccCCC-CCc
Q 011867 342 VRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDILDPDR-MLIARRAYRESCIFSDG---SYAKDLTILGVD-LAR 415 (476)
Q Consensus 342 Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~LDP~~-k~F~~rL~Re~c~~~~g---~yvKDLs~Lgrd-l~~ 415 (476)
..+.||+.+||+.+. +.+.++|.|++...++..+++.++... .+|...+..++-...++ .|.+-+.++|.. +++
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~ 165 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTGVQDVQS 165 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCCCCCCCHHHHHHHHHHcCCCChhH
Confidence 468999999999997 789999999999999999999998652 58888887766444443 567778888886 799
Q ss_pred EEEEECChhhhccCCCceeee
Q 011867 416 IAIIDNSPQVFRLQLDNGIPI 436 (476)
Q Consensus 416 vIIIDDsp~~~~~qp~NgI~I 436 (476)
+++|+|++.-...-...|++.
T Consensus 166 ~~~igD~~~Di~aa~~aG~~~ 186 (220)
T TIGR03351 166 VAVAGDTPNDLEAGINAGAGA 186 (220)
T ss_pred eEEeCCCHHHHHHHHHCCCCe
Confidence 999999998776665677775
No 29
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=98.27 E-value=1.4e-06 Score=73.79 Aligned_cols=107 Identities=19% Similarity=0.231 Sum_probs=74.7
Q ss_pred EEEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhhc-CceEEEEcCCchHHHHHHHHHhCCCC
Q 011867 305 TLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVAE-MFEIIVFTASESVYAEKLLDILDPDR 383 (476)
Q Consensus 305 tLVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls~-~yEIvIfTas~~~YA~~ILd~LDP~~ 383 (476)
++|||+||||+........ ...+..+|++.++|+++.+ .+.++|.|++.+.++..+++.++...
T Consensus 1 ~~vfD~D~tl~~~~~~~~~---------------~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~ 65 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIAE---------------IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDD 65 (139)
T ss_pred CeEEccCCceEccCccccc---------------cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCch
Confidence 4799999999887431110 2235689999999999995 59999999999999999999987643
Q ss_pred ceeeEEEecccceec----------------CC---cccccccccCCCCCcEEEEECChhhhc
Q 011867 384 MLIARRAYRESCIFS----------------DG---SYAKDLTILGVDLARIAIIDNSPQVFR 427 (476)
Q Consensus 384 k~F~~rL~Re~c~~~----------------~g---~yvKDLs~Lgrdl~~vIIIDDsp~~~~ 427 (476)
++..++........ ++ .+.+-+..++..++.+++|+|++.-..
T Consensus 66 -~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~ 127 (139)
T cd01427 66 -YFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPDKLLAALKLLGVDPEEVLMVGDSLNDIE 127 (139)
T ss_pred -hhhheeccchhhhhcccccccccccccccCCCCHHHHHHHHHHcCCChhhEEEeCCCHHHHH
Confidence 34444543322211 11 222334455667899999999997543
No 30
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=98.26 E-value=1e-06 Score=77.70 Aligned_cols=114 Identities=17% Similarity=0.183 Sum_probs=78.9
Q ss_pred eEEEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cCceEEEEcCCc--------hHHHHH
Q 011867 304 VTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVA-EMFEIIVFTASE--------SVYAEK 374 (476)
Q Consensus 304 ktLVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~--------~~YA~~ 374 (476)
+.|+||+||||++..... .........|++.++|++|. +.+.++|.|.+. ..++..
T Consensus 1 k~~~~D~dgtL~~~~~~~---------------~~~~~~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~ 65 (132)
T TIGR01662 1 KGVVLDLDGTLTDDVPYV---------------DDEDERILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVAR 65 (132)
T ss_pred CEEEEeCCCceecCCCCC---------------CCHHHheeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHH
Confidence 479999999999641100 01112457899999999998 679999999999 888999
Q ss_pred HHHHhCCCCceeeEEEecccceecC-Cccccccccc-CCCCCcEEEEEC-ChhhhccCCCceee
Q 011867 375 LLDILDPDRMLIARRAYRESCIFSD-GSYAKDLTIL-GVDLARIAIIDN-SPQVFRLQLDNGIP 435 (476)
Q Consensus 375 ILd~LDP~~k~F~~rL~Re~c~~~~-g~yvKDLs~L-grdl~~vIIIDD-sp~~~~~qp~NgI~ 435 (476)
+++.++.. +...++......-+ ..|.+-++.+ +.+++++++|+| ...-+.....+|+.
T Consensus 66 ~l~~~~l~---~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~ 126 (132)
T TIGR01662 66 RLEELGVP---IDVLYACPHCRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLA 126 (132)
T ss_pred HHHHCCCC---EEEEEECCCCCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCe
Confidence 99998764 22223332211111 2566777888 599999999999 56655544455554
No 31
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=98.22 E-value=7.6e-07 Score=88.94 Aligned_cols=94 Identities=14% Similarity=0.117 Sum_probs=76.1
Q ss_pred EeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHhCCCCceeeEEEecccceecCC---cccccccccCCCCCcEE
Q 011867 342 VRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDILDPDRMLIARRAYRESCIFSDG---SYAKDLTILGVDLARIA 417 (476)
Q Consensus 342 Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~LDP~~k~F~~rL~Re~c~~~~g---~yvKDLs~Lgrdl~~vI 417 (476)
+..+||+.++|+.+. +++.++|.|.+...++..+++.++..+ +|...+..+.+...++ .|.+-+.++|.+++++|
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~-~f~~i~~~d~~~~~Kp~p~~~~~~~~~~g~~~~~~l 178 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGR-YFRWIIGGDTLPQKKPDPAALLFVMKMAGVPPSQSL 178 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHh-hCeEEEecCCCCCCCCCcHHHHHHHHHhCCChhHEE
Confidence 457899999999998 679999999999999999999988765 7887776665544443 35666778899999999
Q ss_pred EEECChhhhccCCCceeee
Q 011867 418 IIDNSPQVFRLQLDNGIPI 436 (476)
Q Consensus 418 IIDDsp~~~~~qp~NgI~I 436 (476)
+|+|++.-...-..+|+..
T Consensus 179 ~IGD~~~Di~aA~~aGi~~ 197 (272)
T PRK13223 179 FVGDSRSDVLAAKAAGVQC 197 (272)
T ss_pred EECCCHHHHHHHHHCCCeE
Confidence 9999998776665677754
No 32
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=98.22 E-value=1.1e-06 Score=79.74 Aligned_cols=117 Identities=17% Similarity=0.205 Sum_probs=79.6
Q ss_pred eEEEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cCceEEEEcCCch-------------
Q 011867 304 VTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVA-EMFEIIVFTASES------------- 369 (476)
Q Consensus 304 ktLVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~------------- 369 (476)
++|+||+||||+........ .....+...||+.++|+.|. +.|.++|.|+..+
T Consensus 1 ~~~~~d~dgtl~~~~~~~~~-------------~~~~~~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~ 67 (147)
T TIGR01656 1 PALFLDRDGVINEDTVSDYP-------------RSLDDWQLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRA 67 (147)
T ss_pred CeEEEeCCCceeccCCcccC-------------CCHHHeEEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHH
Confidence 47899999999987532110 01112357899999999998 7899999999874
Q ss_pred --HHHHHHHHHhCCCCceeeEEEec-----ccceecCC---cccccccccCCCCCcEEEEECChhhhccCCCceeee
Q 011867 370 --VYAEKLLDILDPDRMLIARRAYR-----ESCIFSDG---SYAKDLTILGVDLARIAIIDNSPQVFRLQLDNGIPI 436 (476)
Q Consensus 370 --~YA~~ILd~LDP~~k~F~~rL~R-----e~c~~~~g---~yvKDLs~Lgrdl~~vIIIDDsp~~~~~qp~NgI~I 436 (476)
.++..+++.++.. +...++. +.....++ .|.+-+..+|.+++++++|.|++.-.......||..
T Consensus 68 ~~~~~~~~l~~~~l~---~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~ 141 (147)
T TIGR01656 68 PNGRVLELLRQLGVA---VDGVLFCPHHPADNCSCRKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAA 141 (147)
T ss_pred HHHHHHHHHHhCCCc---eeEEEECCCCCCCCCCCCCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCE
Confidence 5677777777654 1122222 22211232 566777788999999999999988766555556654
No 33
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=98.20 E-value=1.7e-06 Score=85.53 Aligned_cols=98 Identities=11% Similarity=0.025 Sum_probs=79.1
Q ss_pred EeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHhCCCCceeeEEEecccceecCC---cccccccccCCC-CCcE
Q 011867 342 VRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDILDPDRMLIARRAYRESCIFSDG---SYAKDLTILGVD-LARI 416 (476)
Q Consensus 342 Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~LDP~~k~F~~rL~Re~c~~~~g---~yvKDLs~Lgrd-l~~v 416 (476)
+...||+.++|+.|. +.+.++|.|++.+..++.+++.+...+-+|...+..++....++ .|.+.++++|.. ++++
T Consensus 100 ~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~~~~~~~~~KP~p~~~~~a~~~l~~~~~~e~ 179 (267)
T PRK13478 100 ATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVVTTDDVPAGRPYPWMALKNAIELGVYDVAAC 179 (267)
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEEcCCcCCCCCCChHHHHHHHHHcCCCCCcce
Confidence 467899999999998 67999999999999999999988766523477777777655554 677888899975 6999
Q ss_pred EEEECChhhhccCCCceeeeeee
Q 011867 417 AIIDNSPQVFRLQLDNGIPIKSW 439 (476)
Q Consensus 417 IIIDDsp~~~~~qp~NgI~I~~f 439 (476)
|+|+|++.-+......|++....
T Consensus 180 l~IGDs~~Di~aA~~aG~~~i~v 202 (267)
T PRK13478 180 VKVDDTVPGIEEGLNAGMWTVGV 202 (267)
T ss_pred EEEcCcHHHHHHHHHCCCEEEEE
Confidence 99999998877666778766544
No 34
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.20 E-value=5.1e-07 Score=85.85 Aligned_cols=97 Identities=14% Similarity=0.180 Sum_probs=71.0
Q ss_pred EeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHhCCCCceeeEEEeccc-----------cee-cCC-ccccccc
Q 011867 342 VRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDILDPDRMLIARRAYRES-----------CIF-SDG-SYAKDLT 407 (476)
Q Consensus 342 Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~LDP~~k~F~~rL~Re~-----------c~~-~~g-~yvKDLs 407 (476)
+..+||+.+||+.+. +.+.++|.|++...++..+++.++... +|...+..++ +.. .++ .+.+-++
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 162 (219)
T TIGR00338 84 LPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDA-AFANRLEVEDGKLTGLVEGPIVDASYKGKTLLILLR 162 (219)
T ss_pred CCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCc-eEeeEEEEECCEEEEEecCcccCCcccHHHHHHHHH
Confidence 568999999999999 579999999999999999999988765 6665443211 110 012 3444556
Q ss_pred ccCCCCCcEEEEECChhhhccCCCceeeeeeec
Q 011867 408 ILGVDLARIAIIDNSPQVFRLQLDNGIPIKSWF 440 (476)
Q Consensus 408 ~Lgrdl~~vIIIDDsp~~~~~qp~NgI~I~~f~ 440 (476)
+++.++++|++|+|++.-+..-...|+.+ .|.
T Consensus 163 ~~~~~~~~~i~iGDs~~Di~aa~~ag~~i-~~~ 194 (219)
T TIGR00338 163 KEGISPENTVAVGDGANDLSMIKAAGLGI-AFN 194 (219)
T ss_pred HcCCCHHHEEEEECCHHHHHHHHhCCCeE-EeC
Confidence 67889999999999988775544556766 454
No 35
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=98.19 E-value=3.2e-06 Score=78.74 Aligned_cols=115 Identities=12% Similarity=0.129 Sum_probs=79.0
Q ss_pred eEEEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cCceEEEEcCCch-------------
Q 011867 304 VTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVA-EMFEIIVFTASES------------- 369 (476)
Q Consensus 304 ktLVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~------------- 369 (476)
+.|.||+||||+... ++. ...-.+.+.||+.++|++|. +.|.++|.|++..
T Consensus 2 ~~~~~D~Dgtl~~~~-------~~~--------~~~~~~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~ 66 (176)
T TIGR00213 2 KAIFLDRDGTINIDH-------GYV--------HEIDNFEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQ 66 (176)
T ss_pred CEEEEeCCCCEeCCC-------CCC--------CCHHHeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHH
Confidence 678999999998421 110 01112446799999999999 6799999999884
Q ss_pred --HHHHHHHHHhCCCCceeeEEEecc-----------cceecCC---cccccccccCCCCCcEEEEECChhhhccCCCce
Q 011867 370 --VYAEKLLDILDPDRMLIARRAYRE-----------SCIFSDG---SYAKDLTILGVDLARIAIIDNSPQVFRLQLDNG 433 (476)
Q Consensus 370 --~YA~~ILd~LDP~~k~F~~rL~Re-----------~c~~~~g---~yvKDLs~Lgrdl~~vIIIDDsp~~~~~qp~Ng 433 (476)
.+...++..+... |...++.. .|...++ .|.+-++++|.+++++++|+|++.-......+|
T Consensus 67 ~~~~~~~~l~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG 143 (176)
T TIGR00213 67 LTEWMDWSLAERDVD---LDGIYYCPHHPEGVEEFRQVCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAK 143 (176)
T ss_pred HHHHHHHHHHHcCCC---ccEEEECCCCCcccccccCCCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCC
Confidence 3444455544332 44444432 3333343 677888889999999999999998776666677
Q ss_pred eee
Q 011867 434 IPI 436 (476)
Q Consensus 434 I~I 436 (476)
++.
T Consensus 144 ~~~ 146 (176)
T TIGR00213 144 VKT 146 (176)
T ss_pred CcE
Confidence 754
No 36
>PLN02940 riboflavin kinase
Probab=98.18 E-value=6.6e-07 Score=93.86 Aligned_cols=97 Identities=8% Similarity=0.041 Sum_probs=80.6
Q ss_pred EeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHH-HhCCCCceeeEEEecccceecCC---cccccccccCCCCCcE
Q 011867 342 VRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLD-ILDPDRMLIARRAYRESCIFSDG---SYAKDLTILGVDLARI 416 (476)
Q Consensus 342 Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd-~LDP~~k~F~~rL~Re~c~~~~g---~yvKDLs~Lgrdl~~v 416 (476)
+...||+.++|++|. +.+.++|.|++.+.+++.+++ .++-.+ +|+.++..+++...++ .|.+.++.+|..++++
T Consensus 92 ~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~-~Fd~ii~~d~v~~~KP~p~~~~~a~~~lgv~p~~~ 170 (382)
T PLN02940 92 IKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKE-SFSVIVGGDEVEKGKPSPDIFLEAAKRLNVEPSNC 170 (382)
T ss_pred CCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHh-hCCEEEehhhcCCCCCCHHHHHHHHHHcCCChhHE
Confidence 457899999999998 679999999999999999887 566544 8999999888776664 6788888999999999
Q ss_pred EEEECChhhhccCCCceeeeeee
Q 011867 417 AIIDNSPQVFRLQLDNGIPIKSW 439 (476)
Q Consensus 417 IIIDDsp~~~~~qp~NgI~I~~f 439 (476)
|+|+|++.........|+..-..
T Consensus 171 l~VGDs~~Di~aA~~aGi~~I~v 193 (382)
T PLN02940 171 LVIEDSLPGVMAGKAAGMEVIAV 193 (382)
T ss_pred EEEeCCHHHHHHHHHcCCEEEEE
Confidence 99999998776665667765444
No 37
>COG4996 Predicted phosphatase [General function prediction only]
Probab=98.17 E-value=1.2e-05 Score=73.18 Aligned_cols=145 Identities=17% Similarity=0.054 Sum_probs=101.4
Q ss_pred EEEEecccccccccCCCCCCCCceeEEEe-cceeeeEEEeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHhCCC
Q 011867 305 TLVLDLDETLVHSSTEPCDDADFTFQVFF-NMKEHTVYVRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDILDPD 382 (476)
Q Consensus 305 tLVLDLDgTLVhS~~~~~~~~D~~~~v~~-~~~~~~~~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~LDP~ 382 (476)
.++||+|+||.+.-.-....+.|+.--.. -....+..|.+||++.+||+.+. .+|-+..+|-....-|-++|..||..
T Consensus 2 ~i~~d~d~t~wdhh~iSsl~pPf~rVs~n~i~Ds~G~ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLral~~~ 81 (164)
T COG4996 2 AIVFDADKTLWDHHNISSLEPPFRRVSSNTIEDSKGREVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRALDLL 81 (164)
T ss_pred cEEEeCCCcccccccchhcCCcceecCccceecCCCeEEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHHhchh
Confidence 58999999998763321122222110000 01334678899999999999999 78999999999999999999999998
Q ss_pred CceeeEEEecccceecCCccccccccc------CCCCCcEEEEECChhhh---ccCCCceeeeeeecCCCChhHHHHH
Q 011867 383 RMLIARRAYRESCIFSDGSYAKDLTIL------GVDLARIAIIDNSPQVF---RLQLDNGIPIKSWFDDPSDCALISL 451 (476)
Q Consensus 383 ~k~F~~rL~Re~c~~~~g~yvKDLs~L------grdl~~vIIIDDsp~~~---~~qp~NgI~I~~f~~d~~D~eLl~L 451 (476)
+ ||.+.+...|-.... ...+=|+.+ ...+.++|.+||+...+ +....|.=.++.|.+-+.=.+...|
T Consensus 82 ~-yFhy~ViePhP~K~~-ML~~llr~i~~er~~~ikP~~Ivy~DDR~iH~~~Iwe~~G~V~~~~~~~Di~c~~ei~sl 157 (164)
T COG4996 82 Q-YFHYIVIEPHPYKFL-MLSQLLREINTERNQKIKPSEIVYLDDRRIHFGNIWEYLGNVKCLEMWKDISCYSEIFSL 157 (164)
T ss_pred h-hEEEEEecCCChhHH-HHHHHHHHHHHhhccccCcceEEEEecccccHHHHHHhcCCeeeeEeecchHHHHHHHHH
Confidence 6 999988876643211 112222222 34688999999999866 4577888899999887544444333
No 38
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=98.15 E-value=1.5e-06 Score=82.42 Aligned_cols=95 Identities=16% Similarity=0.153 Sum_probs=75.1
Q ss_pred EEeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHhCCCCceeeEEEecccceecCC---cccccccccCCCCCcE
Q 011867 341 YVRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDILDPDRMLIARRAYRESCIFSDG---SYAKDLTILGVDLARI 416 (476)
Q Consensus 341 ~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~LDP~~k~F~~rL~Re~c~~~~g---~yvKDLs~Lgrdl~~v 416 (476)
....+||+.+||+.+. +.+.++|.|.+...++..+++.++... +|...+..+.....++ .+.+-+++++.+++++
T Consensus 91 ~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~-~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~ 169 (226)
T PRK13222 91 GSRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIAD-YFSVVIGGDSLPNKKPDPAPLLLACEKLGLDPEEM 169 (226)
T ss_pred cCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCcc-CccEEEcCCCCCCCCcChHHHHHHHHHcCCChhhe
Confidence 3668999999999999 679999999999999999999998764 6776665555433332 4567777889999999
Q ss_pred EEEECChhhhccCCCceeee
Q 011867 417 AIIDNSPQVFRLQLDNGIPI 436 (476)
Q Consensus 417 IIIDDsp~~~~~qp~NgI~I 436 (476)
|+|+|++.-+..-...|++.
T Consensus 170 i~igD~~~Di~~a~~~g~~~ 189 (226)
T PRK13222 170 LFVGDSRNDIQAARAAGCPS 189 (226)
T ss_pred EEECCCHHHHHHHHHCCCcE
Confidence 99999998776554556643
No 39
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=98.15 E-value=6e-06 Score=84.06 Aligned_cols=122 Identities=17% Similarity=0.178 Sum_probs=86.7
Q ss_pred CCceEEEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeC-chHHHHHHHhh-cCceEEEEcCCchHHHHHHHHH
Q 011867 301 RKRVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQR-PFLRTFLERVA-EMFEIIVFTASESVYAEKLLDI 378 (476)
Q Consensus 301 ~kKktLVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~R-Pgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~ 378 (476)
+.++.+||||||||+.... .|.+| |++.++|++|. +++.++|||++.+.++..+++.
T Consensus 124 ~~~kvIvFDLDgTLi~~~~---------------------~v~irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~ 182 (301)
T TIGR01684 124 EPPHVVVFDLDSTLITDEE---------------------PVRIRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRK 182 (301)
T ss_pred ccceEEEEecCCCCcCCCC---------------------ccccCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHH
Confidence 6678999999999997632 35588 99999999999 4699999999999999999999
Q ss_pred hCCCCceeeEEEecccceecCC----------------ccccccc---cc--------------CCCC-CcEEEEECChh
Q 011867 379 LDPDRMLIARRAYRESCIFSDG----------------SYAKDLT---IL--------------GVDL-ARIAIIDNSPQ 424 (476)
Q Consensus 379 LDP~~k~F~~rL~Re~c~~~~g----------------~yvKDLs---~L--------------grdl-~~vIIIDDsp~ 424 (476)
++..+ +|...+...+....++ .+..|.. .| |.+- +-+-+|||-+.
T Consensus 183 lGLd~-YFdvIIs~Gdv~~~kp~~e~~d~~~~~~~~~~~f~~d~~~~~~lPKSprvvl~yL~~~gvn~~KtitLVDDl~~ 261 (301)
T TIGR01684 183 VKLDR-YFDIIISGGHKAEEYSTMSTEDRQYRYVFTKTPFYLNTTDGKRLPKSPRVVLWYLYDLGVNYFKSITLVDDLAD 261 (301)
T ss_pred cCCCc-ccCEEEECCccccCCCCccccccccceEEecCCeEEeCCCCCcCCCCCeehHHHHHHcCCceeeeEEEeccCcc
Confidence 99986 8877777555544331 1223331 22 2222 45668898886
Q ss_pred hhccCCCceeeeeeecCCCCh
Q 011867 425 VFRLQLDNGIPIKSWFDDPSD 445 (476)
Q Consensus 425 ~~~~qp~NgI~I~~f~~d~~D 445 (476)
+= .+=+|-+.++..-.-.+|
T Consensus 262 Nn-~~YD~fv~v~rcp~P~~D 281 (301)
T TIGR01684 262 NN-FNYDYFVNVSRCPVPVND 281 (301)
T ss_pred cC-ccceeEEEeeeCCCCchH
Confidence 43 233677777766544444
No 40
>COG5190 FCP1 TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription]
Probab=98.15 E-value=1.3e-06 Score=91.79 Aligned_cols=135 Identities=27% Similarity=0.464 Sum_probs=104.2
Q ss_pred CCceEEEEecccccccccCCCCCCCCc----e------eEEEecceeeeEEEeeCchHHHHHHHhhcCceEEEEcCCchH
Q 011867 301 RKRVTLVLDLDETLVHSSTEPCDDADF----T------FQVFFNMKEHTVYVRQRPFLRTFLERVAEMFEIIVFTASESV 370 (476)
Q Consensus 301 ~kKktLVLDLDgTLVhS~~~~~~~~D~----~------~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls~~yEIvIfTas~~~ 370 (476)
+++..||.|+|.|.+|+...+..+... . ....+......++++.||++..|+...++.|++.+||.+...
T Consensus 24 ~~~~~l~~~~~~~~~h~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~l~~~~~~i~~~~e~~~~~~~~~~ 103 (390)
T COG5190 24 DKKLILVVDLDQTIIHTTVDPNDPNNVNQSLERTLKSVNDRDPVQEKCAYYVKARPKLFPFLTKISPLYELHIYTMGTRA 103 (390)
T ss_pred CcccccccccccceecccccCCCCCchhhhhhccccchhccccccccccceeeecccccchhhhhchhcceeeEeecccc
Confidence 567789999999999998765211100 0 011122235678999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCceeeEEEecccceecCCccccccccc-CCCCCcEEEEECChhhh---ccCCCceeeeee
Q 011867 371 YAEKLLDILDPDRMLIARRAYRESCIFSDGSYAKDLTIL-GVDLARIAIIDNSPQVF---RLQLDNGIPIKS 438 (476)
Q Consensus 371 YA~~ILd~LDP~~k~F~~rL~Re~c~~~~g~yvKDLs~L-grdl~~vIIIDDsp~~~---~~qp~NgI~I~~ 438 (476)
||+.+.+++||.+++|..|....+. ....-.|-++++ ..+...++++||++..| ..+ .|.+...+
T Consensus 104 ~~~~~~~i~d~~g~~~~d~~~~~~~--~~~~~~~s~~~l~p~~~n~~vi~~d~~~~~~~~d~~-~~~v~~~~ 172 (390)
T COG5190 104 YAERIAKIIDPTGKLFNDRILSRDE--SGSLSQKSLSRLFPKDQNMVVIIDDRGDVWGVGDMN-SNFVAKSP 172 (390)
T ss_pred chhhhhhcccccccccccccccccc--cccchhhhhhhcCccccccccccccccccCCccchh-hhhhcccc
Confidence 9999999999999999888874332 233556777766 67889999999999999 444 56676666
No 41
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=98.12 E-value=8.7e-07 Score=84.52 Aligned_cols=96 Identities=8% Similarity=0.028 Sum_probs=78.1
Q ss_pred EEeeCchHHHHHHHhhcCceEEEEcCCchHHHHHHHHHhCCCCceee-EEEecccceecCC---cccccccccCCCCCcE
Q 011867 341 YVRQRPFLRTFLERVAEMFEIIVFTASESVYAEKLLDILDPDRMLIA-RRAYRESCIFSDG---SYAKDLTILGVDLARI 416 (476)
Q Consensus 341 ~Vk~RPgl~eFL~~Ls~~yEIvIfTas~~~YA~~ILd~LDP~~k~F~-~rL~Re~c~~~~g---~yvKDLs~Lgrdl~~v 416 (476)
.+...||+.++|+.+. +.++|.|++.+.+++.+++.++... +|. ..+..++....|+ .|.+-+.++|..+++|
T Consensus 86 ~~~~~~gv~~~L~~L~--~~~~ivTn~~~~~~~~~l~~~~l~~-~F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~p~~~ 162 (221)
T PRK10563 86 ELEPIAGANALLESIT--VPMCVVSNGPVSKMQHSLGKTGMLH-YFPDKLFSGYDIQRWKPDPALMFHAAEAMNVNVENC 162 (221)
T ss_pred cCCcCCCHHHHHHHcC--CCEEEEeCCcHHHHHHHHHhcChHH-hCcceEeeHHhcCCCCCChHHHHHHHHHcCCCHHHe
Confidence 3567899999999994 8999999999999999999988765 775 4556655554454 6788888999999999
Q ss_pred EEEECChhhhccCCCceeeeeee
Q 011867 417 AIIDNSPQVFRLQLDNGIPIKSW 439 (476)
Q Consensus 417 IIIDDsp~~~~~qp~NgI~I~~f 439 (476)
|+|+|++.........|+++.-+
T Consensus 163 l~igDs~~di~aA~~aG~~~i~~ 185 (221)
T PRK10563 163 ILVDDSSAGAQSGIAAGMEVFYF 185 (221)
T ss_pred EEEeCcHhhHHHHHHCCCEEEEE
Confidence 99999999877666778777644
No 42
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=98.09 E-value=9.1e-06 Score=75.65 Aligned_cols=123 Identities=16% Similarity=0.135 Sum_probs=88.9
Q ss_pred eEEEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cCceEEEEcCC---------------
Q 011867 304 VTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVA-EMFEIIVFTAS--------------- 367 (476)
Q Consensus 304 ktLVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls-~~yEIvIfTas--------------- 367 (476)
+.+.||.||||++.... .| . ....-.++.-||+.++|++|. +.|.++|.|+.
T Consensus 2 ~~~~~d~dg~l~~~~~~-----~~--~-----~~~~~~~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~ 69 (161)
T TIGR01261 2 KILFIDRDGTLIEEPPS-----DF--Q-----VDALEKLRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDG 69 (161)
T ss_pred CEEEEeCCCCccccCCC-----cc--c-----cCCHHHeeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHH
Confidence 57999999999985321 00 0 011124567899999999999 57999999996
Q ss_pred chHHHHHHHHHhCCCCceeeEEEec-----ccceecCC---cccccccccCCCCCcEEEEECChhhhccCCCceeeeeee
Q 011867 368 ESVYAEKLLDILDPDRMLIARRAYR-----ESCIFSDG---SYAKDLTILGVDLARIAIIDNSPQVFRLQLDNGIPIKSW 439 (476)
Q Consensus 368 ~~~YA~~ILd~LDP~~k~F~~rL~R-----e~c~~~~g---~yvKDLs~Lgrdl~~vIIIDDsp~~~~~qp~NgI~I~~f 439 (476)
...++..+++.++.. |...++. +.+...++ .+..-++.++.+++++++|.|+..-......+|+..-.+
T Consensus 70 ~~~~~~~~l~~~gl~---fd~ii~~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~~ 146 (161)
T TIGR01261 70 PHNLMLQIFRSQGII---FDDVLICPHFPDDNCDCRKPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQY 146 (161)
T ss_pred HHHHHHHHHHHCCCc---eeEEEECCCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEEE
Confidence 356888888888875 7666653 55555554 345556677889999999999987666666778877665
Q ss_pred cC
Q 011867 440 FD 441 (476)
Q Consensus 440 ~~ 441 (476)
..
T Consensus 147 ~~ 148 (161)
T TIGR01261 147 DE 148 (161)
T ss_pred Ch
Confidence 43
No 43
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=98.07 E-value=2.1e-06 Score=77.14 Aligned_cols=82 Identities=9% Similarity=-0.025 Sum_probs=66.4
Q ss_pred EEeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHhCCCCceeeEEEecccceecCC---cccccccccCCCCCcE
Q 011867 341 YVRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDILDPDRMLIARRAYRESCIFSDG---SYAKDLTILGVDLARI 416 (476)
Q Consensus 341 ~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~LDP~~k~F~~rL~Re~c~~~~g---~yvKDLs~Lgrdl~~v 416 (476)
.....||+.++|+.+. +.+.++|.|++.+..+..+++.+ . ..+|...+..++.. .++ .|.+-+.++|.++ ++
T Consensus 62 ~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l-~~~f~~i~~~~~~~-~Kp~~~~~~~~~~~~~~~~-~~ 137 (154)
T TIGR01549 62 EEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-L-GDYFDLILGSDEFG-AKPEPEIFLAALESLGLPP-EV 137 (154)
T ss_pred hheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-H-HhcCcEEEecCCCC-CCcCHHHHHHHHHHcCCCC-CE
Confidence 4455799999999997 77999999999999999999986 3 34788777777665 443 5677778889888 99
Q ss_pred EEEECChhhh
Q 011867 417 AIIDNSPQVF 426 (476)
Q Consensus 417 IIIDDsp~~~ 426 (476)
++|.|++.-.
T Consensus 138 l~iGDs~~Di 147 (154)
T TIGR01549 138 LHVGDNLNDI 147 (154)
T ss_pred EEEeCCHHHH
Confidence 9999997543
No 44
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=98.06 E-value=8.8e-06 Score=75.97 Aligned_cols=117 Identities=15% Similarity=0.093 Sum_probs=79.5
Q ss_pred ceEEEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cCceEEEEcCCch------------
Q 011867 303 RVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVA-EMFEIIVFTASES------------ 369 (476)
Q Consensus 303 KktLVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~------------ 369 (476)
.|.|+||+||||+.... . + ....-.+...||+.++|++|. +.|.++|.|++..
T Consensus 3 ~~~~~~d~~~t~~~~~~-~-----~--------~~~~~~~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~ 68 (181)
T PRK08942 3 MKAIFLDRDGVINVDSD-G-----Y--------VKSPDEWIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLN 68 (181)
T ss_pred ccEEEEECCCCcccCCc-c-----c--------cCCHHHeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHH
Confidence 47899999999865421 0 0 011112457899999999999 5699999998863
Q ss_pred ---HHHHHHHHHhCCCCceeeEEEeccc-----ceecCC---cccccccccCCCCCcEEEEECChhhhccCCCceeee
Q 011867 370 ---VYAEKLLDILDPDRMLIARRAYRES-----CIFSDG---SYAKDLTILGVDLARIAIIDNSPQVFRLQLDNGIPI 436 (476)
Q Consensus 370 ---~YA~~ILd~LDP~~k~F~~rL~Re~-----c~~~~g---~yvKDLs~Lgrdl~~vIIIDDsp~~~~~qp~NgI~I 436 (476)
.+...+++.++. .|...++..+ +...++ .|.+.+..+|.+++++++|+|++.-...-...|+..
T Consensus 69 ~~~~~~~~~l~~~g~---~f~~i~~~~~~~~~~~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~ 143 (181)
T PRK08942 69 ALHEKMDWSLADRGG---RLDGIYYCPHHPEDGCDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTP 143 (181)
T ss_pred HHHHHHHHHHHHcCC---ccceEEECCCCCCCCCcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeE
Confidence 334445555543 3666665432 223333 567888889999999999999998765555566643
No 45
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=98.05 E-value=1.8e-05 Score=80.67 Aligned_cols=122 Identities=19% Similarity=0.205 Sum_probs=86.8
Q ss_pred CCceEEEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeC-chHHHHHHHhh-cCceEEEEcCCchHHHHHHHHH
Q 011867 301 RKRVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQR-PFLRTFLERVA-EMFEIIVFTASESVYAEKLLDI 378 (476)
Q Consensus 301 ~kKktLVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~R-Pgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~ 378 (476)
+.++.+||||||||+.... -|.+| |++.++|++|. +++.++|||++.++++..+++.
T Consensus 126 ~~~~~i~~D~D~TL~~~~~---------------------~v~irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~ 184 (303)
T PHA03398 126 EIPHVIVFDLDSTLITDEE---------------------PVRIRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKE 184 (303)
T ss_pred eeccEEEEecCCCccCCCC---------------------ccccCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHH
Confidence 6778999999999998732 24578 99999999999 5799999999999999999999
Q ss_pred hCCCCceeeEEEecccceecC----------------Cccccccc---cc--------------CCCC-CcEEEEECChh
Q 011867 379 LDPDRMLIARRAYRESCIFSD----------------GSYAKDLT---IL--------------GVDL-ARIAIIDNSPQ 424 (476)
Q Consensus 379 LDP~~k~F~~rL~Re~c~~~~----------------g~yvKDLs---~L--------------grdl-~~vIIIDDsp~ 424 (476)
++..+ +|...+..++..... ..+..|.. .| |.+- +-+-+|||-+.
T Consensus 185 lgL~~-yFDvII~~g~i~~k~~~~~~~d~~~~~~~~~~~f~~d~~~~~~lPKSprvVl~yL~~~gvn~~KtiTLVDDl~~ 263 (303)
T PHA03398 185 TKLEG-YFDIIICGGRKAGEYSRRVIVDNKYKMVFVKKPFYLDVTDVKNLPKSPRVVLWYLRKKGVNYFKTITLVDDLKS 263 (303)
T ss_pred cCCCc-cccEEEECCCcccccccceeecccceeEEecCceeEeCCcccCCCCCCeehHHHHHHcCcceeccEEEeccCcc
Confidence 99875 787666655443221 12223333 22 2222 45667888775
Q ss_pred hhccCCCceeeeeeecCCCCh
Q 011867 425 VFRLQLDNGIPIKSWFDDPSD 445 (476)
Q Consensus 425 ~~~~qp~NgI~I~~f~~d~~D 445 (476)
+= .+=+|-+.++..-.-.+|
T Consensus 264 Nn-~~YD~fv~v~rcp~P~~D 283 (303)
T PHA03398 264 NN-YSYDYFVNVKRCPEPVND 283 (303)
T ss_pred cC-ccceeEEEeeeCCCCcHH
Confidence 54 344777777777655554
No 46
>PHA02597 30.2 hypothetical protein; Provisional
Probab=98.05 E-value=6.8e-07 Score=83.88 Aligned_cols=98 Identities=9% Similarity=0.100 Sum_probs=69.6
Q ss_pred EEeeCchHHHHHHHhhcCceEEEEcCCchHHHHHHHHHhCCCC---ceeeEEEecccceecCCcccccccccCCCCCcEE
Q 011867 341 YVRQRPFLRTFLERVAEMFEIIVFTASESVYAEKLLDILDPDR---MLIARRAYRESCIFSDGSYAKDLTILGVDLARIA 417 (476)
Q Consensus 341 ~Vk~RPgl~eFL~~Ls~~yEIvIfTas~~~YA~~ILd~LDP~~---k~F~~rL~Re~c~~~~g~yvKDLs~Lgrdl~~vI 417 (476)
.+...||+.++|+.|.+.+.+++.|++.......++..+...+ .+|+..+..+........|.+.++++| ++.+|
T Consensus 72 ~~~~~pG~~e~L~~L~~~~~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~~~~kp~~~~~a~~~~~--~~~~v 149 (197)
T PHA02597 72 YLSAYDDALDVINKLKEDYDFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCGHDESKEKLFIKAKEKYG--DRVVC 149 (197)
T ss_pred hccCCCCHHHHHHHHHhcCCEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEeccCcccHHHHHHHHHHhC--CCcEE
Confidence 3568999999999999778887777766655555666654332 256666665554322225666777788 78899
Q ss_pred EEECChhhhccCCCc--eeeeeeec
Q 011867 418 IIDNSPQVFRLQLDN--GIPIKSWF 440 (476)
Q Consensus 418 IIDDsp~~~~~qp~N--gI~I~~f~ 440 (476)
+|||++........+ ||+.--+.
T Consensus 150 ~vgDs~~di~aA~~a~~Gi~~i~~~ 174 (197)
T PHA02597 150 FVDDLAHNLDAAHEALSQLPVIHML 174 (197)
T ss_pred EeCCCHHHHHHHHHHHcCCcEEEec
Confidence 999999998777678 88877653
No 47
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=97.99 E-value=2.2e-05 Score=74.10 Aligned_cols=118 Identities=18% Similarity=0.208 Sum_probs=66.6
Q ss_pred ceEEEEecccccccccCCCCCCCCceeE----EEecceeeeEEEeeCchHHHHHHHhh-cCceEEEEcCC-chHHHHHHH
Q 011867 303 RVTLVLDLDETLVHSSTEPCDDADFTFQ----VFFNMKEHTVYVRQRPFLRTFLERVA-EMFEIIVFTAS-ESVYAEKLL 376 (476)
Q Consensus 303 KktLVLDLDgTLVhS~~~~~~~~D~~~~----v~~~~~~~~~~Vk~RPgl~eFL~~Ls-~~yEIvIfTas-~~~YA~~IL 376 (476)
++++|||||+||-.........+.|... ... ...+.-|.+-|++.+.|+.|. +..+|++.|.+ .+++|.++|
T Consensus 3 PklvvFDLD~TlW~~~~~~~~~~Pf~~~~~~~~v~--D~~g~~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L 80 (169)
T PF12689_consen 3 PKLVVFDLDYTLWPPWMDTHVGPPFKKISNGNVVV--DSRGEEVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELL 80 (169)
T ss_dssp -SEEEE-STTTSSSS-TTTSS-S-EEE-TTS--EE--ETT--EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHH
T ss_pred CcEEEEcCcCCCCchhHhhccCCCceecCCCCEEE--eCCCCEEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHH
Confidence 5789999999997764422222222110 000 234567889999999999999 68999999964 688999999
Q ss_pred HHhCCC----------CceeeEEEecccceecCCccccccc-ccCCCCCcEEEEECChhhh
Q 011867 377 DILDPD----------RMLIARRAYRESCIFSDGSYAKDLT-ILGVDLARIAIIDNSPQVF 426 (476)
Q Consensus 377 d~LDP~----------~k~F~~rL~Re~c~~~~g~yvKDLs-~Lgrdl~~vIIIDDsp~~~ 426 (476)
+.|+.. . +|.+.-.-.. .+..+.+.|. ..|.+.+.++++||...+.
T Consensus 81 ~~l~i~~~~~~~~~~~~-~F~~~eI~~g---sK~~Hf~~i~~~tgI~y~eMlFFDDe~~N~ 137 (169)
T PF12689_consen 81 KLLEIDDADGDGVPLIE-YFDYLEIYPG---SKTTHFRRIHRKTGIPYEEMLFFDDESRNI 137 (169)
T ss_dssp HHTT-C----------C-CECEEEESSS----HHHHHHHHHHHH---GGGEEEEES-HHHH
T ss_pred HhcCCCccccccccchh-hcchhheecC---chHHHHHHHHHhcCCChhHEEEecCchhcc
Confidence 999876 3 5554332222 2223444444 4588999999999998765
No 48
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=97.97 E-value=8.2e-06 Score=81.61 Aligned_cols=128 Identities=15% Similarity=0.127 Sum_probs=94.6
Q ss_pred CCceEEEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHh
Q 011867 301 RKRVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDIL 379 (476)
Q Consensus 301 ~kKktLVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~L 379 (476)
.+++.+++|+||||....... ..++. ...-....|++.++|+++. +++.++|.|+.....++.+++.|
T Consensus 156 ~~~~~~~~D~dgtl~~~~~~~--~~~~~---------~~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l 224 (300)
T PHA02530 156 GLPKAVIFDIDGTLAKMGGRS--PYDWT---------KVKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWL 224 (300)
T ss_pred CCCCEEEEECCCcCcCCCCCC--ccchh---------hcccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHH
Confidence 356789999999999764321 11221 0112347999999999998 67999999999999999999999
Q ss_pred CCCCceeeEEEeccc-------ceecCC---cccccccccCC-CCCcEEEEECChhhhccCCCceeeeeee
Q 011867 380 DPDRMLIARRAYRES-------CIFSDG---SYAKDLTILGV-DLARIAIIDNSPQVFRLQLDNGIPIKSW 439 (476)
Q Consensus 380 DP~~k~F~~rL~Re~-------c~~~~g---~yvKDLs~Lgr-dl~~vIIIDDsp~~~~~qp~NgI~I~~f 439 (476)
+..+.+|...+..+. +...++ .+.+.|..++. +++.+++|+|++........+||++-..
T Consensus 225 ~~~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i~v 295 (300)
T PHA02530 225 RQTDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLECWQV 295 (300)
T ss_pred HHcCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeEEEe
Confidence 988767876666552 222232 34566666777 6799999999999888877889887654
No 49
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=97.89 E-value=2.3e-05 Score=80.17 Aligned_cols=110 Identities=17% Similarity=0.115 Sum_probs=78.3
Q ss_pred CceEEEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHH--
Q 011867 302 KRVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDI-- 378 (476)
Q Consensus 302 kKktLVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~-- 378 (476)
.+|+||+|||+||..-..... - ...-......|++.++|+.++ +++.++|.|......|..+++.
T Consensus 2 ~~k~~v~DlDnTlw~gv~~e~----g--------~~~i~~~~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~ 69 (320)
T TIGR01686 2 ALKVLVLDLDNTLWGGVLGED----G--------IDNLNLSPLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRK 69 (320)
T ss_pred CeEEEEEcCCCCCCCCEEccC----C--------ccccccCccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCc
Confidence 478999999999986532110 0 000011224789999999999 7899999999999999999998
Q ss_pred --hCCCCceeeEEEecccceecCC-cccccccccCCCCCcEEEEECChhhhc
Q 011867 379 --LDPDRMLIARRAYRESCIFSDG-SYAKDLTILGVDLARIAIIDNSPQVFR 427 (476)
Q Consensus 379 --LDP~~k~F~~rL~Re~c~~~~g-~yvKDLs~Lgrdl~~vIIIDDsp~~~~ 427 (476)
+.... +|...... ...++ .+.+-++.+|.+++.+|+|||++....
T Consensus 70 ~~~~~~~-~f~~~~~~---~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~ 117 (320)
T TIGR01686 70 DFILQAE-DFDARSIN---WGPKSESLRKIAKKLNLGTDSFLFIDDNPAERA 117 (320)
T ss_pred cccCcHH-HeeEEEEe---cCchHHHHHHHHHHhCCCcCcEEEECCCHHHHH
Confidence 66554 56554332 11222 445566778999999999999998553
No 50
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=97.88 E-value=1.5e-05 Score=93.63 Aligned_cols=105 Identities=10% Similarity=0.079 Sum_probs=86.0
Q ss_pred eCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHhCCCCceeeEEEecccceecCC---cccccccccCCCCCcEEEE
Q 011867 344 QRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDILDPDRMLIARRAYRESCIFSDG---SYAKDLTILGVDLARIAII 419 (476)
Q Consensus 344 ~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~LDP~~k~F~~rL~Re~c~~~~g---~yvKDLs~Lgrdl~~vIII 419 (476)
..||+.+||++|. +.+.++|.|++...+++.+++.++....+|...+..+++...|+ .|.+.++++|.+++++|+|
T Consensus 162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~lgv~p~e~v~I 241 (1057)
T PLN02919 162 GFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDIFLAAAKILGVPTSECVVI 241 (1057)
T ss_pred cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECcccccCCCCHHHHHHHHHHcCcCcccEEEE
Confidence 5799999999998 77999999999999999999999875447999998888776664 6788899999999999999
Q ss_pred ECChhhhccCCCceeeeeeecCCCChhHH
Q 011867 420 DNSPQVFRLQLDNGIPIKSWFDDPSDCAL 448 (476)
Q Consensus 420 DDsp~~~~~qp~NgI~I~~f~~d~~D~eL 448 (476)
+|++..+......|++.-.........+|
T Consensus 242 gDs~~Di~AA~~aGm~~I~v~~~~~~~~L 270 (1057)
T PLN02919 242 EDALAGVQAARAAGMRCIAVTTTLSEEIL 270 (1057)
T ss_pred cCCHHHHHHHHHcCCEEEEECCCCCHHHH
Confidence 99999887666777776655433333344
No 51
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=97.83 E-value=2.7e-05 Score=77.07 Aligned_cols=132 Identities=11% Similarity=0.035 Sum_probs=80.0
Q ss_pred CCceEEEEecccccccccCC--CC---CCC-CceeEE--Eecc---eeeeEEEeeCchHHHHHHHhh-cCceEEEEcCC-
Q 011867 301 RKRVTLVLDLDETLVHSSTE--PC---DDA-DFTFQV--FFNM---KEHTVYVRQRPFLRTFLERVA-EMFEIIVFTAS- 367 (476)
Q Consensus 301 ~kKktLVLDLDgTLVhS~~~--~~---~~~-D~~~~v--~~~~---~~~~~~Vk~RPgl~eFL~~Ls-~~yEIvIfTas- 367 (476)
+++..++|||||||+++..- .. ... ++.+-. .+.. ....-.....|++.+||+++. +.+.++|.|+.
T Consensus 61 ~~p~aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~l~~~G~~i~iVTnr~ 140 (237)
T TIGR01672 61 RPPIAVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRGDAIFFVTGRT 140 (237)
T ss_pred CCCeEEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHHHHHCCCEEEEEeCCC
Confidence 44569999999999999752 10 010 011000 0000 001122234455999999998 67999999998
Q ss_pred ---chHHHHHHHHHhCCCCceeeEEEecccceecCCcccccccccCCCCCcEEEEECChhhhccCCCceeeee
Q 011867 368 ---ESVYAEKLLDILDPDRMLIARRAYRESCIFSDGSYAKDLTILGVDLARIAIIDNSPQVFRLQLDNGIPIK 437 (476)
Q Consensus 368 ---~~~YA~~ILd~LDP~~k~F~~rL~Re~c~~~~g~yvKDLs~Lgrdl~~vIIIDDsp~~~~~qp~NgI~I~ 437 (476)
...+++.+++.++..+ +|...+..+.....+.. |. ..+. ...-+|+|-|+..-+.....+|+...
T Consensus 141 ~~k~~~~a~~ll~~lGi~~-~f~~i~~~d~~~~~Kp~--~~-~~l~-~~~i~i~vGDs~~DI~aAk~AGi~~I 208 (237)
T TIGR01672 141 PGKTDTVSKTLAKNFHIPA-MNPVIFAGDKPGQYQYT--KT-QWIQ-DKNIRIHYGDSDNDITAAKEAGARGI 208 (237)
T ss_pred CCcCHHHHHHHHHHhCCch-heeEEECCCCCCCCCCC--HH-HHHH-hCCCeEEEeCCHHHHHHHHHCCCCEE
Confidence 6679999999998865 77666555543322221 11 1111 22337999999987765555666644
No 52
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=97.82 E-value=9.4e-06 Score=86.82 Aligned_cols=93 Identities=13% Similarity=0.141 Sum_probs=73.2
Q ss_pred EeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHhCCCCceeeEEEeccccee-cCC-cccccccccCCCCCcEEE
Q 011867 342 VRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDILDPDRMLIARRAYRESCIF-SDG-SYAKDLTILGVDLARIAI 418 (476)
Q Consensus 342 Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~LDP~~k~F~~rL~Re~c~~-~~g-~yvKDLs~Lgrdl~~vII 418 (476)
+.++||+.++|+++. +.+.++|.|++...++..+++.++-.. +|...+..+.... .++ .|.+.++.+ +++++|+
T Consensus 329 ~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~-~f~~i~~~d~v~~~~kP~~~~~al~~l--~~~~~v~ 405 (459)
T PRK06698 329 GALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQ-WVTETFSIEQINSLNKSDLVKSILNKY--DIKEAAV 405 (459)
T ss_pred CCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHh-hcceeEecCCCCCCCCcHHHHHHHHhc--CcceEEE
Confidence 567899999999998 679999999999999999999998865 8888888766431 222 445555555 4689999
Q ss_pred EECChhhhccCCCceeeee
Q 011867 419 IDNSPQVFRLQLDNGIPIK 437 (476)
Q Consensus 419 IDDsp~~~~~qp~NgI~I~ 437 (476)
|.|++.-+..-...|+..-
T Consensus 406 VGDs~~Di~aAk~AG~~~I 424 (459)
T PRK06698 406 VGDRLSDINAAKDNGLIAI 424 (459)
T ss_pred EeCCHHHHHHHHHCCCeEE
Confidence 9999987766666776653
No 53
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=97.82 E-value=4.3e-05 Score=71.35 Aligned_cols=108 Identities=17% Similarity=0.274 Sum_probs=71.3
Q ss_pred CceEEEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cCceEEEEcCCchH----------
Q 011867 302 KRVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVA-EMFEIIVFTASESV---------- 370 (476)
Q Consensus 302 kKktLVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~---------- 370 (476)
.+++++||+||||+....... + ...... +..+-||+.+.|+.|. ++|.++|.|+....
T Consensus 12 ~~k~~~~D~Dgtl~~~~~~~~----~------~~~~~~-~~~~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~ 80 (166)
T TIGR01664 12 QSKVAAFDLDGTLITTRSGKV----F------PTSASD-WRFLYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESF 80 (166)
T ss_pred cCcEEEEeCCCceEecCCCCc----c------cCChHH-eEEecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHH
Confidence 357899999999997532110 0 000001 1124599999999997 78999999997763
Q ss_pred --HHHHHHHHhCCCCceeeEEEecccceecCC---cccccccccC--CCCCcEEEEECCh
Q 011867 371 --YAEKLLDILDPDRMLIARRAYRESCIFSDG---SYAKDLTILG--VDLARIAIIDNSP 423 (476)
Q Consensus 371 --YA~~ILd~LDP~~k~F~~rL~Re~c~~~~g---~yvKDLs~Lg--rdl~~vIIIDDsp 423 (476)
+++.+++.++.. +...+..+.....++ .+..-+..+| .+++++++|.|++
T Consensus 81 ~~~i~~~l~~~gl~---~~~ii~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~ 137 (166)
T TIGR01664 81 KNKIEAFLEKLKVP---IQVLAATHAGLYRKPMTGMWEYLQSQYNSPIKMTRSFYVGDAA 137 (166)
T ss_pred HHHHHHHHHHcCCC---EEEEEecCCCCCCCCccHHHHHHHHHcCCCCCchhcEEEECCC
Confidence 577788888864 223333333222232 4455566777 8999999999996
No 54
>PRK06769 hypothetical protein; Validated
Probab=97.75 E-value=3.2e-05 Score=72.36 Aligned_cols=120 Identities=14% Similarity=0.139 Sum_probs=76.3
Q ss_pred CceEEEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cCceEEEEcCCchHH-----HHHH
Q 011867 302 KRVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVA-EMFEIIVFTASESVY-----AEKL 375 (476)
Q Consensus 302 kKktLVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~Y-----A~~I 375 (476)
+-+.|+||+||||.-... + .+.-.+...|++.++|++|. +.|.++|.|++.... ...+
T Consensus 3 ~~~~~~~d~d~~~~~~~~-------~---------~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~ 66 (173)
T PRK06769 3 NIQAIFIDRDGTIGGDTT-------I---------HYPGSFTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADF 66 (173)
T ss_pred CCcEEEEeCCCcccCCCC-------C---------CCHHHeEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHH
Confidence 346899999999952210 0 01112346899999999998 679999999876421 1123
Q ss_pred HHHhCCCCceeeEEEe-----cccceecCC---cccccccccCCCCCcEEEEECChhhhccCCCceeeeeee
Q 011867 376 LDILDPDRMLIARRAY-----RESCIFSDG---SYAKDLTILGVDLARIAIIDNSPQVFRLQLDNGIPIKSW 439 (476)
Q Consensus 376 Ld~LDP~~k~F~~rL~-----Re~c~~~~g---~yvKDLs~Lgrdl~~vIIIDDsp~~~~~qp~NgI~I~~f 439 (476)
...+...+ |...+. .+.....++ .|.+-+++++.+++++++|+|++.-.......|+...-.
T Consensus 67 ~~~l~~~g--~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v 136 (173)
T PRK06769 67 VQELKGFG--FDDIYLCPHKHGDGCECRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTILV 136 (173)
T ss_pred HHHHHhCC--cCEEEECcCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEE
Confidence 33333222 222222 222233343 677888889999999999999998776555666665544
No 55
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=97.73 E-value=3.2e-05 Score=68.90 Aligned_cols=95 Identities=19% Similarity=0.301 Sum_probs=79.9
Q ss_pred EEEeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHhCCCCceeeEEEecccceecCC---cccccccccCCCCCc
Q 011867 340 VYVRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDILDPDRMLIARRAYRESCIFSDG---SYAKDLTILGVDLAR 415 (476)
Q Consensus 340 ~~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~LDP~~k~F~~rL~Re~c~~~~g---~yvKDLs~Lgrdl~~ 415 (476)
......|++.++|+.++ +++.++|.|.+...++..+++.++... +|...++.++....++ .|.+-++.+|.++++
T Consensus 74 ~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~-~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p~~ 152 (176)
T PF13419_consen 74 SKLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDD-YFDEIISSDDVGSRKPDPDAYRRALEKLGIPPEE 152 (176)
T ss_dssp GGEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGG-GCSEEEEGGGSSSSTTSHHHHHHHHHHHTSSGGG
T ss_pred hccchhhhhhhhhhhcccccceeEEeecCCccccccccccccccc-ccccccccchhhhhhhHHHHHHHHHHHcCCCcce
Confidence 46789999999999999 899999999999999999999998774 8998888877766555 567777888999999
Q ss_pred EEEEECChhhhccCCCceee
Q 011867 416 IAIIDNSPQVFRLQLDNGIP 435 (476)
Q Consensus 416 vIIIDDsp~~~~~qp~NgI~ 435 (476)
+++|||++.........|++
T Consensus 153 ~~~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 153 ILFVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp EEEEESSHHHHHHHHHTTSE
T ss_pred EEEEeCCHHHHHHHHHcCCe
Confidence 99999999766544444544
No 56
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=97.67 E-value=0.00011 Score=70.72 Aligned_cols=97 Identities=12% Similarity=0.031 Sum_probs=66.4
Q ss_pred EEeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHhCCCCceeeEE--EecccceecCC-------------cccc
Q 011867 341 YVRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDILDPDRMLIARR--AYRESCIFSDG-------------SYAK 404 (476)
Q Consensus 341 ~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~LDP~~k~F~~r--L~Re~c~~~~g-------------~yvK 404 (476)
.+.++||+.+||+.+. +.+.++|.|++...+++++++.+-+...++... +..+.....++ ...+
T Consensus 72 ~~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~~K~~ 151 (219)
T PRK09552 72 TAEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGLIPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCGCCKPS 151 (219)
T ss_pred CCCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHhCCcCcEEEeEEEecCCeeEEeccCCccccccccCCCchHH
Confidence 3678999999999998 679999999999999999999872122244322 22222111111 1234
Q ss_pred cccccCCCCCcEEEEECChhhhccCCCceeeee
Q 011867 405 DLTILGVDLARIAIIDNSPQVFRLQLDNGIPIK 437 (476)
Q Consensus 405 DLs~Lgrdl~~vIIIDDsp~~~~~qp~NgI~I~ 437 (476)
-++.++....+||+|.|+..-...-...|+.+.
T Consensus 152 ~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a 184 (219)
T PRK09552 152 LIRKLSDTNDFHIVIGDSITDLEAAKQADKVFA 184 (219)
T ss_pred HHHHhccCCCCEEEEeCCHHHHHHHHHCCccee
Confidence 555667788899999999987765545666444
No 57
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=97.67 E-value=4e-05 Score=73.97 Aligned_cols=97 Identities=14% Similarity=0.108 Sum_probs=78.3
Q ss_pred EeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHhCCCCceeeEEEecccceecCC---cccccccccCCCCCcEE
Q 011867 342 VRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDILDPDRMLIARRAYRESCIFSDG---SYAKDLTILGVDLARIA 417 (476)
Q Consensus 342 Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~LDP~~k~F~~rL~Re~c~~~~g---~yvKDLs~Lgrdl~~vI 417 (476)
...-||+.+.|..++ ++|.++|.|+.....++.+++.++... +|..++..+.....|+ ....-+..+|.+++++|
T Consensus 88 ~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~-~F~~i~g~~~~~~~KP~P~~l~~~~~~~~~~~~~~l 166 (220)
T COG0546 88 SRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLAD-YFDVIVGGDDVPPPKPDPEPLLLLLEKLGLDPEEAL 166 (220)
T ss_pred CccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCcc-ccceEEcCCCCCCCCcCHHHHHHHHHHhCCChhheE
Confidence 467899999999999 789999999999999999999999886 8888887454444444 34566677888878999
Q ss_pred EEECChhhhccCCCceeeeeee
Q 011867 418 IIDNSPQVFRLQLDNGIPIKSW 439 (476)
Q Consensus 418 IIDDsp~~~~~qp~NgI~I~~f 439 (476)
+|=|+..-...-...|++...+
T Consensus 167 ~VGDs~~Di~aA~~Ag~~~v~v 188 (220)
T COG0546 167 MVGDSLNDILAAKAAGVPAVGV 188 (220)
T ss_pred EECCCHHHHHHHHHcCCCEEEE
Confidence 9999999777666667664433
No 58
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=97.65 E-value=4.9e-05 Score=72.13 Aligned_cols=96 Identities=16% Similarity=0.145 Sum_probs=79.2
Q ss_pred EEeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHhCCCCceeeEEEecccceecCC---cccccccccCCCCCcE
Q 011867 341 YVRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDILDPDRMLIARRAYRESCIFSDG---SYAKDLTILGVDLARI 416 (476)
Q Consensus 341 ~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~LDP~~k~F~~rL~Re~c~~~~g---~yvKDLs~Lgrdl~~v 416 (476)
++.+.||+.+||++|. +++.++|.|++...++...++.++... +|...+..+.....++ .|.+-++++|.+++++
T Consensus 92 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~-~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~ 170 (221)
T TIGR02253 92 YLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRD-FFDAVITSEEEGVEKPHPKIFYAALKRLGVKPEEA 170 (221)
T ss_pred hCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHH-hccEEEEeccCCCCCCCHHHHHHHHHHcCCChhhE
Confidence 3578999999999998 569999999999999999999998865 8998888877765554 6788889999999999
Q ss_pred EEEECCh-hhhccCCCceeeee
Q 011867 417 AIIDNSP-QVFRLQLDNGIPIK 437 (476)
Q Consensus 417 IIIDDsp-~~~~~qp~NgI~I~ 437 (476)
|+|+|++ .-+......|+...
T Consensus 171 ~~igDs~~~di~~A~~aG~~~i 192 (221)
T TIGR02253 171 VMVGDRLDKDIKGAKNLGMKTV 192 (221)
T ss_pred EEECCChHHHHHHHHHCCCEEE
Confidence 9999998 45544445566554
No 59
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=97.62 E-value=7e-05 Score=68.31 Aligned_cols=92 Identities=17% Similarity=0.188 Sum_probs=74.1
Q ss_pred EeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHhCCCCceeeEEEecccceecCC---cccccccccCCCCCcEE
Q 011867 342 VRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDILDPDRMLIARRAYRESCIFSDG---SYAKDLTILGVDLARIA 417 (476)
Q Consensus 342 Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~LDP~~k~F~~rL~Re~c~~~~g---~yvKDLs~Lgrdl~~vI 417 (476)
+..+||+.+||+.+. +.+.++|.|++...+ ..++..++..+ +|...++.+.....++ .|.+-++++|.++++++
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~-~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~ 161 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRD-LFDVVIFSGDVGRGKPDPDIYLLALKKLGLKPEECL 161 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHH-HCCEEEEcCCCCCCCCCHHHHHHHHHHcCCCcceEE
Confidence 578899999999998 579999999999998 77766677765 7888888776665553 56777888899999999
Q ss_pred EEECChhhhccCCCceee
Q 011867 418 IIDNSPQVFRLQLDNGIP 435 (476)
Q Consensus 418 IIDDsp~~~~~qp~NgI~ 435 (476)
+|+|++.....-...|+.
T Consensus 162 ~vgD~~~di~aA~~~G~~ 179 (183)
T TIGR01509 162 FVDDSPAGIEAAKAAGMH 179 (183)
T ss_pred EEcCCHHHHHHHHHcCCE
Confidence 999999866554455554
No 60
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=97.50 E-value=0.0002 Score=66.77 Aligned_cols=110 Identities=16% Similarity=0.139 Sum_probs=77.9
Q ss_pred CCceEEEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cCceEEEEcCCc-hHHHHHHHHH
Q 011867 301 RKRVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVA-EMFEIIVFTASE-SVYAEKLLDI 378 (476)
Q Consensus 301 ~kKktLVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~-~~YA~~ILd~ 378 (476)
.+-+.||+|+||||..... ....|++.++|++|. +.+.++|.|.+. ...+..+++.
T Consensus 23 ~~v~~vv~D~Dgtl~~~~~----------------------~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~ 80 (170)
T TIGR01668 23 VGIKGVVLDKDNTLVYPDH----------------------NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKA 80 (170)
T ss_pred CCCCEEEEecCCccccCCC----------------------CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHH
Confidence 4567899999999986521 125799999999998 569999999998 6788888877
Q ss_pred hCCCCceeeEEEecccceecCCcccccccccCCCCCcEEEEECChh-hhccCCCceeeeeee
Q 011867 379 LDPDRMLIARRAYRESCIFSDGSYAKDLTILGVDLARIAIIDNSPQ-VFRLQLDNGIPIKSW 439 (476)
Q Consensus 379 LDP~~k~F~~rL~Re~c~~~~g~yvKDLs~Lgrdl~~vIIIDDsp~-~~~~qp~NgI~I~~f 439 (476)
++... + + .........|.+-++.++.+++++++|+|+.. -......+|+..--+
T Consensus 81 ~gl~~-~-----~-~~~KP~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~i~v 135 (170)
T TIGR01668 81 LGIPV-L-----P-HAVKPPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSYTILV 135 (170)
T ss_pred cCCEE-E-----c-CCCCCChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCeEEEE
Confidence 76431 1 1 11111122566777888999999999999983 454444566655544
No 61
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=97.49 E-value=0.00032 Score=73.40 Aligned_cols=121 Identities=15% Similarity=0.155 Sum_probs=82.9
Q ss_pred CceEEEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cCceEEEEcCC-------------
Q 011867 302 KRVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVA-EMFEIIVFTAS------------- 367 (476)
Q Consensus 302 kKktLVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls-~~yEIvIfTas------------- 367 (476)
+++.|+||-||||+...... + .......+.+.|++.++|++|. +.|.++|.|..
T Consensus 1 ~~k~l~lDrDgtl~~~~~~~-----y-------~~~~~~~~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l 68 (354)
T PRK05446 1 MQKILFIDRDGTLIEEPPTD-----F-------QVDSLDKLAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDF 68 (354)
T ss_pred CCcEEEEeCCCCccCCCCcc-----c-------cccCcccceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHH
Confidence 47899999999999864211 0 0112234678999999999998 57999999994
Q ss_pred --chHHHHHHHHHhCCCCceeeEEEec-----ccceecCC---cccccccccCCCCCcEEEEECChhhhccCCCceeeee
Q 011867 368 --ESVYAEKLLDILDPDRMLIARRAYR-----ESCIFSDG---SYAKDLTILGVDLARIAIIDNSPQVFRLQLDNGIPIK 437 (476)
Q Consensus 368 --~~~YA~~ILd~LDP~~k~F~~rL~R-----e~c~~~~g---~yvKDLs~Lgrdl~~vIIIDDsp~~~~~qp~NgI~I~ 437 (476)
...++..+++.++. +|...+++ +.|...++ .+..-+..++.+++++++|-|++.-+.....+|+..-
T Consensus 69 ~~~~~~i~~iL~~~gl---~fd~i~i~~~~~sd~~~~rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I 145 (354)
T PRK05446 69 DPPHNLMMQIFESQGI---KFDEVLICPHFPEDNCSCRKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGI 145 (354)
T ss_pred hhHHHHHHHHHHHcCC---ceeeEEEeCCcCcccCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEE
Confidence 24456666666654 35555554 45544443 2334445678899999999999876655556677654
No 62
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=97.49 E-value=0.00011 Score=68.91 Aligned_cols=94 Identities=13% Similarity=0.144 Sum_probs=78.2
Q ss_pred EeeCchHHHHHHHhhc-CceEEEEcCCchHHHHHHHHHhCCCCceeeEEEecccceecCC---cccccccccCCCCCcEE
Q 011867 342 VRQRPFLRTFLERVAE-MFEIIVFTASESVYAEKLLDILDPDRMLIARRAYRESCIFSDG---SYAKDLTILGVDLARIA 417 (476)
Q Consensus 342 Vk~RPgl~eFL~~Ls~-~yEIvIfTas~~~YA~~ILd~LDP~~k~F~~rL~Re~c~~~~g---~yvKDLs~Lgrdl~~vI 417 (476)
+...|++.++|+++.+ +|.++|.|.+...++..+++.++... +|...+..++....|+ .|.+-++.+|.++++++
T Consensus 91 ~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~-~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~~~~ 169 (198)
T TIGR01428 91 LPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDD-PFDAVLSADAVRAYKPAPQVYQLALEALGVPPDEVL 169 (198)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChh-hhheeEehhhcCCCCCCHHHHHHHHHHhCCChhhEE
Confidence 4578999999999996 59999999999999999999988654 8998888877665554 56788888999999999
Q ss_pred EEECChhhhccCCCceeee
Q 011867 418 IIDNSPQVFRLQLDNGIPI 436 (476)
Q Consensus 418 IIDDsp~~~~~qp~NgI~I 436 (476)
+|+|++.-+......|+..
T Consensus 170 ~vgD~~~Di~~A~~~G~~~ 188 (198)
T TIGR01428 170 FVASNPWDLGGAKKFGFKT 188 (198)
T ss_pred EEeCCHHHHHHHHHCCCcE
Confidence 9999997665555566654
No 63
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=97.48 E-value=0.00061 Score=69.10 Aligned_cols=72 Identities=18% Similarity=0.241 Sum_probs=59.3
Q ss_pred CCceEEEEecccccccccCCCCCCCCceeEEEecceeeeEEEe-eCchHHHHHHHhhc-CceEEEEcCCchHHHHHHHHH
Q 011867 301 RKRVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVR-QRPFLRTFLERVAE-MFEIIVFTASESVYAEKLLDI 378 (476)
Q Consensus 301 ~kKktLVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk-~RPgl~eFL~~Ls~-~yEIvIfTas~~~YA~~ILd~ 378 (476)
+++-.+|||||.|||..... +. .-|.+.+.|.++.+ +.-+++||.|.+++|...++.
T Consensus 120 ~~phVIVfDlD~TLItd~~~---------------------v~Ir~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~~ 178 (297)
T PF05152_consen 120 EPPHVIVFDLDSTLITDEGD---------------------VRIRDPAVYDSLRELKEQGCVLVLWSYGNREHVRHSLKE 178 (297)
T ss_pred CCCcEEEEECCCcccccCCc---------------------cccCChHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHH
Confidence 56679999999999976431 11 24889999999995 568999999999999999999
Q ss_pred hCCCCceeeEEEeccc
Q 011867 379 LDPDRMLIARRAYRES 394 (476)
Q Consensus 379 LDP~~k~F~~rL~Re~ 394 (476)
++..+ +|...|.+..
T Consensus 179 ~~L~~-~Fd~ii~~G~ 193 (297)
T PF05152_consen 179 LKLEG-YFDIIICGGN 193 (297)
T ss_pred hCCcc-ccEEEEeCCc
Confidence 99875 8999888543
No 64
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=97.48 E-value=0.00012 Score=69.24 Aligned_cols=101 Identities=13% Similarity=0.114 Sum_probs=80.3
Q ss_pred EeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHhCCCCceeeEEEecccceecCC---cccccccccCCCCCcEE
Q 011867 342 VRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDILDPDRMLIARRAYRESCIFSDG---SYAKDLTILGVDLARIA 417 (476)
Q Consensus 342 Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~LDP~~k~F~~rL~Re~c~~~~g---~yvKDLs~Lgrdl~~vI 417 (476)
...+||+.++|+.+. +++.++|.|++....+..++.....-..+|...++.+++...|+ .|.+-++.+|.++++++
T Consensus 83 ~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l 162 (199)
T PRK09456 83 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVLQAEGFSAADAV 162 (199)
T ss_pred hccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCCCCCCHHHHHHHHHHcCCChhHeE
Confidence 457999999999998 67999999999988777665442222347888888887776665 67888899999999999
Q ss_pred EEECChhhhccCCCceeeeeeecCC
Q 011867 418 IIDNSPQVFRLQLDNGIPIKSWFDD 442 (476)
Q Consensus 418 IIDDsp~~~~~qp~NgI~I~~f~~d 442 (476)
+|||++.........|+...-+.+.
T Consensus 163 ~vgD~~~di~aA~~aG~~~i~~~~~ 187 (199)
T PRK09456 163 FFDDNADNIEAANALGITSILVTDK 187 (199)
T ss_pred EeCCCHHHHHHHHHcCCEEEEecCC
Confidence 9999998877666788887666543
No 65
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=97.47 E-value=3.1e-05 Score=72.77 Aligned_cols=95 Identities=15% Similarity=0.123 Sum_probs=63.6
Q ss_pred EEeeCchHHHHHHHhhcCceEEEEcCCchHHHHHHHHHhCCCCceeeEEEec-cccee-----cCC-cccccccccCCCC
Q 011867 341 YVRQRPFLRTFLERVAEMFEIIVFTASESVYAEKLLDILDPDRMLIARRAYR-ESCIF-----SDG-SYAKDLTILGVDL 413 (476)
Q Consensus 341 ~Vk~RPgl~eFL~~Ls~~yEIvIfTas~~~YA~~ILd~LDP~~k~F~~rL~R-e~c~~-----~~g-~yvKDLs~Lgrdl 413 (476)
.+..+||+.+||+.+.+.+.++|.|++...+++.+++.++... +|..++.- +.... ..+ ....-+..++...
T Consensus 66 ~~~~~pg~~e~L~~L~~~~~~~IvS~~~~~~~~~~l~~~gl~~-~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~~~~~ 144 (205)
T PRK13582 66 TLDPLPGAVEFLDWLRERFQVVILSDTFYEFAGPLMRQLGWPT-LFCHSLEVDEDGMITGYDLRQPDGKRQAVKALKSLG 144 (205)
T ss_pred hCCCCCCHHHHHHHHHhcCCEEEEeCCcHHHHHHHHHHcCCch-hhcceEEECCCCeEECccccccchHHHHHHHHHHhC
Confidence 4567899999999999669999999999999999999998754 66554432 11100 011 1111222334455
Q ss_pred CcEEEEECChhhhccCCCceeee
Q 011867 414 ARIAIIDNSPQVFRLQLDNGIPI 436 (476)
Q Consensus 414 ~~vIIIDDsp~~~~~qp~NgI~I 436 (476)
.++++|.|+..-+.....+|+.+
T Consensus 145 ~~~v~iGDs~~D~~~~~aa~~~v 167 (205)
T PRK13582 145 YRVIAAGDSYNDTTMLGEADAGI 167 (205)
T ss_pred CeEEEEeCCHHHHHHHHhCCCCE
Confidence 78999999998664444445444
No 66
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=97.43 E-value=0.00021 Score=65.65 Aligned_cols=111 Identities=16% Similarity=0.132 Sum_probs=76.1
Q ss_pred eEEEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHhCCC
Q 011867 304 VTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDILDPD 382 (476)
Q Consensus 304 ktLVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~LDP~ 382 (476)
+.++||+||||+....... ......-++.++|+. -|++|. +++.++|.|+.....+..+++.++..
T Consensus 2 ~~~~~D~Dgtl~~~~~~~~-----------~~~~~~~~~~~~~~~--~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~ 68 (154)
T TIGR01670 2 RLLILDVDGVLTDGKIYYT-----------NNGEEIKAFNVRDGY--GIRCALKSGIEVAIITGRKAKLVEDRCKTLGIT 68 (154)
T ss_pred eEEEEeCceeEEcCeEEEC-----------CCCcEEEEEechhHH--HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCC
Confidence 5789999999996421100 111122234567776 688888 68999999999999999999999876
Q ss_pred CceeeEEEecccceecCC-cccccccccCCCCCcEEEEECChhhhccCCCceee
Q 011867 383 RMLIARRAYRESCIFSDG-SYAKDLTILGVDLARIAIIDNSPQVFRLQLDNGIP 435 (476)
Q Consensus 383 ~k~F~~rL~Re~c~~~~g-~yvKDLs~Lgrdl~~vIIIDDsp~~~~~qp~NgI~ 435 (476)
. +|... ..+. .+.+-+..+|.++++++.|-|++.-...-...|+.
T Consensus 69 ~-~~~~~-------~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~ 114 (154)
T TIGR01670 69 H-LYQGQ-------SNKLIAFSDILEKLALAPENVAYIGDDLIDWPVMEKVGLS 114 (154)
T ss_pred E-EEecc-------cchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCe
Confidence 4 55421 1222 23344466788999999999999866554455554
No 67
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=97.43 E-value=0.00013 Score=66.98 Aligned_cols=86 Identities=13% Similarity=0.189 Sum_probs=60.4
Q ss_pred EeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHhCCCCceeeEEEecccceecCC-----------------ccc
Q 011867 342 VRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDILDPDRMLIARRAYRESCIFSDG-----------------SYA 403 (476)
Q Consensus 342 Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~LDP~~k~F~~rL~Re~c~~~~g-----------------~yv 403 (476)
+.++|++.++|+.+. +.+.++|.|++...+++.+++.++... +|...+..+......| ...
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~-~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~ 149 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKD-VFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGCC 149 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChh-heeEEeccCceECCCCcEEEecCCCCccCcCCCCCC
Confidence 678999999999998 569999999999999999999987654 6776665332211111 111
Q ss_pred c--cccccCCC-CCcEEEEECChhhhcc
Q 011867 404 K--DLTILGVD-LARIAIIDNSPQVFRL 428 (476)
Q Consensus 404 K--DLs~Lgrd-l~~vIIIDDsp~~~~~ 428 (476)
| -+..+... ++++|+|+|+..-+..
T Consensus 150 K~~~~~~~~~~~~~~~i~iGD~~~D~~a 177 (188)
T TIGR01489 150 KGKVIHKLSEPKYQHIIYIGDGVTDVCP 177 (188)
T ss_pred HHHHHHHHHhhcCceEEEECCCcchhch
Confidence 2 12222233 7889999999876644
No 68
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=97.43 E-value=0.00016 Score=68.32 Aligned_cols=95 Identities=12% Similarity=0.052 Sum_probs=78.8
Q ss_pred EeeCchHHHHHHHhhcCceEEEEcCCchHHHHHHHHHhCCCCceeeEEEecccceecCC---ccccccccc-CCCCCcEE
Q 011867 342 VRQRPFLRTFLERVAEMFEIIVFTASESVYAEKLLDILDPDRMLIARRAYRESCIFSDG---SYAKDLTIL-GVDLARIA 417 (476)
Q Consensus 342 Vk~RPgl~eFL~~Ls~~yEIvIfTas~~~YA~~ILd~LDP~~k~F~~rL~Re~c~~~~g---~yvKDLs~L-grdl~~vI 417 (476)
+.++||+.++|+++.+.+.++|.|++....++.+++.++-.. +|...+..+.....++ .|.+-++++ |.+++++|
T Consensus 96 ~~~~~g~~~~L~~l~~~~~~~i~Sn~~~~~~~~~l~~~~l~~-~fd~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~v 174 (224)
T TIGR02254 96 HQLLPGAFELMENLQQKFRLYIVTNGVRETQYKRLRKSGLFP-FFDDIFVSEDAGIQKPDKEIFNYALERMPKFSKEEVL 174 (224)
T ss_pred CeeCccHHHHHHHHHhcCcEEEEeCCchHHHHHHHHHCCcHh-hcCEEEEcCccCCCCCCHHHHHHHHHHhcCCCchheE
Confidence 578999999999999669999999999999999999988776 8998888777665554 577888999 99999999
Q ss_pred EEECCh-hhhccCCCceeeee
Q 011867 418 IIDNSP-QVFRLQLDNGIPIK 437 (476)
Q Consensus 418 IIDDsp-~~~~~qp~NgI~I~ 437 (476)
+|+|++ .-+.....+|++..
T Consensus 175 ~igD~~~~di~~A~~~G~~~i 195 (224)
T TIGR02254 175 MIGDSLTADIKGGQNAGLDTC 195 (224)
T ss_pred EECCCcHHHHHHHHHCCCcEE
Confidence 999997 45554445666544
No 69
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=97.34 E-value=0.0001 Score=72.42 Aligned_cols=100 Identities=13% Similarity=0.094 Sum_probs=78.5
Q ss_pred eEEEeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHhC-CCCceeeEEEe--cccceecCC---cccccccccCC
Q 011867 339 TVYVRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDILD-PDRMLIARRAY--RESCIFSDG---SYAKDLTILGV 411 (476)
Q Consensus 339 ~~~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~LD-P~~k~F~~rL~--Re~c~~~~g---~yvKDLs~Lgr 411 (476)
...++.-||+.++++.|. ..-.+.+||++.+..++..+..+. +-. .|++.+. -..+...++ .|.+.++++|.
T Consensus 88 ~~~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~-~f~~~v~~d~~~v~~gKP~Pdi~l~A~~~l~~ 166 (222)
T KOG2914|consen 88 FMNSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFK-NFSHVVLGDDPEVKNGKPDPDIYLKAAKRLGV 166 (222)
T ss_pred ccccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHH-hcCCCeecCCccccCCCCCchHHHHHHHhcCC
Confidence 445678899999999999 679999999999999999998876 443 6777777 444444443 78999999999
Q ss_pred CC-CcEEEEECChhhhccCCCceeeeeee
Q 011867 412 DL-ARIAIIDNSPQVFRLQLDNGIPIKSW 439 (476)
Q Consensus 412 dl-~~vIIIDDsp~~~~~qp~NgI~I~~f 439 (476)
.+ +++++++|+|.....-..-|.++.-.
T Consensus 167 ~~~~k~lVfeds~~Gv~aa~aagm~vi~v 195 (222)
T KOG2914|consen 167 PPPSKCLVFEDSPVGVQAAKAAGMQVVGV 195 (222)
T ss_pred CCccceEEECCCHHHHHHHHhcCCeEEEe
Confidence 88 99999999999876554444444433
No 70
>PLN02954 phosphoserine phosphatase
Probab=97.32 E-value=0.00016 Score=69.02 Aligned_cols=92 Identities=10% Similarity=0.113 Sum_probs=61.8
Q ss_pred EeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHhCCCC-ceeeEEEec-cc------------ce-ecCCccccc
Q 011867 342 VRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDILDPDR-MLIARRAYR-ES------------CI-FSDGSYAKD 405 (476)
Q Consensus 342 Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~LDP~~-k~F~~rL~R-e~------------c~-~~~g~yvKD 405 (476)
..++||+.++|+++. +++.++|.|++.+.+++.+++.++... .+|..++.- ++ |. ..+...++.
T Consensus 83 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i~~ 162 (224)
T PLN02954 83 PRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKAEAVQH 162 (224)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCCcEECccCCCcccCCccHHHHHHH
Confidence 457899999999998 679999999999999999999988652 366554431 11 10 011111111
Q ss_pred -ccccCCCCCcEEEEECChhhhccCCCceee
Q 011867 406 -LTILGVDLARIAIIDNSPQVFRLQLDNGIP 435 (476)
Q Consensus 406 -Ls~Lgrdl~~vIIIDDsp~~~~~qp~NgI~ 435 (476)
+..+| .+++|+|-|++.-......+|+.
T Consensus 163 ~~~~~~--~~~~i~iGDs~~Di~aa~~~~~~ 191 (224)
T PLN02954 163 IKKKHG--YKTMVMIGDGATDLEARKPGGAD 191 (224)
T ss_pred HHHHcC--CCceEEEeCCHHHHHhhhcCCCC
Confidence 12233 46899999999977664444444
No 71
>PRK09449 dUMP phosphatase; Provisional
Probab=97.31 E-value=0.00023 Score=67.89 Aligned_cols=94 Identities=12% Similarity=0.103 Sum_probs=76.6
Q ss_pred EeeCchHHHHHHHhhcCceEEEEcCCchHHHHHHHHHhCCCCceeeEEEecccceecCC---cccccccccCC-CCCcEE
Q 011867 342 VRQRPFLRTFLERVAEMFEIIVFTASESVYAEKLLDILDPDRMLIARRAYRESCIFSDG---SYAKDLTILGV-DLARIA 417 (476)
Q Consensus 342 Vk~RPgl~eFL~~Ls~~yEIvIfTas~~~YA~~ILd~LDP~~k~F~~rL~Re~c~~~~g---~yvKDLs~Lgr-dl~~vI 417 (476)
+...||+.++|++|.+.|.++|.|++...+++.+++.++..+ +|...++.+++...|+ .|.+-++.+|. ++++++
T Consensus 94 ~~~~~g~~~~L~~L~~~~~~~i~Tn~~~~~~~~~l~~~~l~~-~fd~v~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~ 172 (224)
T PRK09449 94 CTPLPGAVELLNALRGKVKMGIITNGFTELQQVRLERTGLRD-YFDLLVISEQVGVAKPDVAIFDYALEQMGNPDRSRVL 172 (224)
T ss_pred CccCccHHHHHHHHHhCCeEEEEeCCcHHHHHHHHHhCChHH-HcCEEEEECccCCCCCCHHHHHHHHHHcCCCCcccEE
Confidence 567899999999999889999999999999999999988765 8999988888766664 67788888986 457899
Q ss_pred EEECChh-hhccCCCceeee
Q 011867 418 IIDNSPQ-VFRLQLDNGIPI 436 (476)
Q Consensus 418 IIDDsp~-~~~~qp~NgI~I 436 (476)
+|+|++. -.......|+..
T Consensus 173 ~vgD~~~~Di~~A~~aG~~~ 192 (224)
T PRK09449 173 MVGDNLHSDILGGINAGIDT 192 (224)
T ss_pred EEcCCcHHHHHHHHHCCCcE
Confidence 9999974 554444455543
No 72
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=97.28 E-value=0.00084 Score=66.62 Aligned_cols=131 Identities=11% Similarity=0.063 Sum_probs=76.8
Q ss_pred CCceEEEEecccccccccCCCC-CCCCce--eEEEecc--------eeeeEEEeeCchHHHHHHHhh-cCceEEEEcCC-
Q 011867 301 RKRVTLVLDLDETLVHSSTEPC-DDADFT--FQVFFNM--------KEHTVYVRQRPFLRTFLERVA-EMFEIIVFTAS- 367 (476)
Q Consensus 301 ~kKktLVLDLDgTLVhS~~~~~-~~~D~~--~~v~~~~--------~~~~~~Vk~RPgl~eFL~~Ls-~~yEIvIfTas- 367 (476)
+++..++||+|||+++++.-.. ....|. ..-++.. .....+....||+.+||+++. +.++|++.|+.
T Consensus 61 ~~p~av~~DIDeTvldnsp~~~~~~~~f~~~~~~y~~~~~fw~~y~~~~~~~a~p~~Ga~elL~~L~~~G~~I~iVTnR~ 140 (237)
T PRK11009 61 RPPMAVGFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQKFWEKMNNGWDEFSIPKEVARQLIDMHVKRGDSIYFITGRT 140 (237)
T ss_pred CCCcEEEEECcCccccCCchheeeeeccCCCcccccChHHHHHHHHhcccccCcchHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 4567999999999999643110 000000 0000000 112334556667999999995 88999999994
Q ss_pred ---chHHHHHHHHHhCC-CCceeeEEEecccceecCCcccccccccCCCCCcEEEEECChhhhccCCCceeeee
Q 011867 368 ---ESVYAEKLLDILDP-DRMLIARRAYRESCIFSDGSYAKDLTILGVDLARIAIIDNSPQVFRLQLDNGIPIK 437 (476)
Q Consensus 368 ---~~~YA~~ILd~LDP-~~k~F~~rL~Re~c~~~~g~yvKDLs~Lgrdl~~vIIIDDsp~~~~~qp~NgI~I~ 437 (476)
...+++.+++.++. ...+|...+..+.. .+..-..-+.. ..-+|+|.|+..-+......|+...
T Consensus 141 ~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~--~K~~K~~~l~~----~~i~I~IGDs~~Di~aA~~AGi~~I 208 (237)
T PRK11009 141 ATKTETVSKTLADDFHIPADNMNPVIFAGDKP--GQYTKTQWLKK----KNIRIFYGDSDNDITAAREAGARGI 208 (237)
T ss_pred CcccHHHHHHHHHHcCCCcccceeEEEcCCCC--CCCCHHHHHHh----cCCeEEEcCCHHHHHHHHHcCCcEE
Confidence 46789999987775 23477655554432 11111111222 2238999999887755545565543
No 73
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=97.21 E-value=0.00025 Score=69.57 Aligned_cols=88 Identities=20% Similarity=0.312 Sum_probs=70.6
Q ss_pred EeeCchHHHHHHHhhcCceEEEEcCCchHHHHHHHHHhCCCCceeeEEEeccc---------ceecCCcccccccccCCC
Q 011867 342 VRQRPFLRTFLERVAEMFEIIVFTASESVYAEKLLDILDPDRMLIARRAYRES---------CIFSDGSYAKDLTILGVD 412 (476)
Q Consensus 342 Vk~RPgl~eFL~~Ls~~yEIvIfTas~~~YA~~ILd~LDP~~k~F~~rL~Re~---------c~~~~g~yvKDLs~Lgrd 412 (476)
++.-|-|++||-.|.+.+ .++||.+.+..|..+|++|+... +|...++.+- |......|-|..+..|.+
T Consensus 99 LkPD~~LRnlLL~l~~r~-k~~FTNa~k~HA~r~Lk~LGieD-cFegii~~e~~np~~~~~vcKP~~~afE~a~k~agi~ 176 (244)
T KOG3109|consen 99 LKPDPVLRNLLLSLKKRR-KWIFTNAYKVHAIRILKKLGIED-CFEGIICFETLNPIEKTVVCKPSEEAFEKAMKVAGID 176 (244)
T ss_pred cCCCHHHHHHHHhCcccc-EEEecCCcHHHHHHHHHHhChHH-hccceeEeeccCCCCCceeecCCHHHHHHHHHHhCCC
Confidence 667788999999998777 89999999999999999999987 8888887432 112223566777778887
Q ss_pred -CCcEEEEECChhhhccCCC
Q 011867 413 -LARIAIIDNSPQVFRLQLD 431 (476)
Q Consensus 413 -l~~vIIIDDsp~~~~~qp~ 431 (476)
++||+++||+..+.+....
T Consensus 177 ~p~~t~FfDDS~~NI~~ak~ 196 (244)
T KOG3109|consen 177 SPRNTYFFDDSERNIQTAKE 196 (244)
T ss_pred CcCceEEEcCchhhHHHHHh
Confidence 9999999999998865443
No 74
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=97.13 E-value=0.0013 Score=72.12 Aligned_cols=109 Identities=11% Similarity=0.107 Sum_probs=74.9
Q ss_pred CCceEEEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cCceEEEEcCCch----------
Q 011867 301 RKRVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVA-EMFEIIVFTASES---------- 369 (476)
Q Consensus 301 ~kKktLVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~---------- 369 (476)
...+++.||+||||+.......-.. .... +..+-|++.+.|+.|. +.|.|+|+|....
T Consensus 166 ~~~Kia~fD~DGTLi~t~sg~~~~~----------~~~d-~~~l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~ 234 (526)
T TIGR01663 166 GQEKIAGFDLDGTIIKTKSGKVFPK----------GPDD-WQIIFPEIPEKLKELEADGFKICIFTNQGGIARGKINADD 234 (526)
T ss_pred ccCcEEEEECCCCccccCCCccCCC----------CHHH-eeecccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHH
Confidence 4568999999999997632110000 0001 2225699999999999 7899999999766
Q ss_pred --HHHHHHHHHhCCCCceeeEEEecccceecCC---ccccccccc----CCCCCcEEEEECCh
Q 011867 370 --VYAEKLLDILDPDRMLIARRAYRESCIFSDG---SYAKDLTIL----GVDLARIAIIDNSP 423 (476)
Q Consensus 370 --~YA~~ILd~LDP~~k~F~~rL~Re~c~~~~g---~yvKDLs~L----grdl~~vIIIDDsp 423 (476)
..+..+++.++.. |...+..+.|.+.++ .+..-+..+ +.+++++++|-|+.
T Consensus 235 ~~~ki~~iL~~lgip---fdviia~~~~~~RKP~pGm~~~a~~~~~~~~~Id~~~S~~VGDaa 294 (526)
T TIGR01663 235 FKAKIEAIVAKLGVP---FQVFIAIGAGFYRKPLTGMWDHLKEEANDGTEIQEDDCFFVGDAA 294 (526)
T ss_pred HHHHHHHHHHHcCCc---eEEEEeCCCCCCCCCCHHHHHHHHHhcCcccCCCHHHeEEeCCcc
Confidence 4688888888753 665555666665553 343333334 57899999999997
No 75
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=97.01 E-value=0.00044 Score=65.51 Aligned_cols=99 Identities=17% Similarity=0.067 Sum_probs=73.6
Q ss_pred EEeeCchHHHHHHHhh-cCceEEEEcCCchHH--HHHHHHHhCCCCceeeEEEecccceecCC---cccccccccCCCCC
Q 011867 341 YVRQRPFLRTFLERVA-EMFEIIVFTASESVY--AEKLLDILDPDRMLIARRAYRESCIFSDG---SYAKDLTILGVDLA 414 (476)
Q Consensus 341 ~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~Y--A~~ILd~LDP~~k~F~~rL~Re~c~~~~g---~yvKDLs~Lgrdl~ 414 (476)
.+...|++.++|+.|. ++|.++|.|++.... +...+..++.. .+|...+..+.+...|+ .|.+-++++|.+++
T Consensus 92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~-~~fd~v~~s~~~~~~KP~p~~~~~~~~~~g~~~~ 170 (211)
T TIGR02247 92 NTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIM-ALFDAVVESCLEGLRKPDPRIYQLMLERLGVAPE 170 (211)
T ss_pred ccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhH-hhCCEEEEeeecCCCCCCHHHHHHHHHHcCCCHH
Confidence 3567899999999998 579999999987654 32333333332 37888877666554554 67788889999999
Q ss_pred cEEEEECChhhhccCCCceeeeeeec
Q 011867 415 RIAIIDNSPQVFRLQLDNGIPIKSWF 440 (476)
Q Consensus 415 ~vIIIDDsp~~~~~qp~NgI~I~~f~ 440 (476)
++++|||++.........|+..--+.
T Consensus 171 ~~l~i~D~~~di~aA~~aG~~~i~v~ 196 (211)
T TIGR02247 171 ECVFLDDLGSNLKPAAALGITTIKVS 196 (211)
T ss_pred HeEEEcCCHHHHHHHHHcCCEEEEEC
Confidence 99999999998877667788766544
No 76
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=96.98 E-value=0.00063 Score=62.52 Aligned_cols=91 Identities=14% Similarity=0.098 Sum_probs=71.7
Q ss_pred eeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHhCCCCceeeEEEecccceecCC---cccccccccCCCCCcEEE
Q 011867 343 RQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDILDPDRMLIARRAYRESCIFSDG---SYAKDLTILGVDLARIAI 418 (476)
Q Consensus 343 k~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~LDP~~k~F~~rL~Re~c~~~~g---~yvKDLs~Lgrdl~~vII 418 (476)
.+.||+.++|++|. +.+.++|.|.+. .+..+++.++... +|...+..++-...++ .|.+-+++++.+++++|+
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~--~~~~~l~~~~l~~-~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~v~ 163 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASK--NAPTVLEKLGLID-YFDAIVDPAEIKKGKPDPEIFLAAAEGLGVSPSECIG 163 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCc--cHHHHHHhcCcHh-hCcEEEehhhcCCCCCChHHHHHHHHHcCCCHHHeEE
Confidence 56899999999998 679999999764 4677888888765 7888887665444443 567888889999999999
Q ss_pred EECChhhhccCCCceeee
Q 011867 419 IDNSPQVFRLQLDNGIPI 436 (476)
Q Consensus 419 IDDsp~~~~~qp~NgI~I 436 (476)
|+|++.-+..-..+|++.
T Consensus 164 vgD~~~di~aA~~aG~~~ 181 (185)
T TIGR01990 164 IEDAQAGIEAIKAAGMFA 181 (185)
T ss_pred EecCHHHHHHHHHcCCEE
Confidence 999998776655667654
No 77
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=96.96 E-value=0.0017 Score=61.08 Aligned_cols=81 Identities=16% Similarity=0.160 Sum_probs=67.4
Q ss_pred eCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHhCCCCceeeEEEecccceecCC---cccccccccCCCCCcEEEE
Q 011867 344 QRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDILDPDRMLIARRAYRESCIFSDG---SYAKDLTILGVDLARIAII 419 (476)
Q Consensus 344 ~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~LDP~~k~F~~rL~Re~c~~~~g---~yvKDLs~Lgrdl~~vIII 419 (476)
..|+..++|+.+. +.+.++|.|++.+.+++.+++.++-.. +|...+..++... ++ .|.+.++.+|.+++++|+|
T Consensus 107 ~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~-~f~~~~~~~~~~~-KP~p~~~~~~~~~~~~~~~~~i~v 184 (197)
T TIGR01548 107 TLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEI-LFPVQIWMEDCPP-KPNPEPLILAAKALGVEACHAAMV 184 (197)
T ss_pred cccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchh-hCCEEEeecCCCC-CcCHHHHHHHHHHhCcCcccEEEE
Confidence 3456699999998 579999999999999999999998765 8988888776544 43 5677788889999999999
Q ss_pred ECChhhh
Q 011867 420 DNSPQVF 426 (476)
Q Consensus 420 DDsp~~~ 426 (476)
+|++.-.
T Consensus 185 GD~~~Di 191 (197)
T TIGR01548 185 GDTVDDI 191 (197)
T ss_pred eCCHHHH
Confidence 9998643
No 78
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=96.95 E-value=0.001 Score=67.11 Aligned_cols=98 Identities=14% Similarity=0.121 Sum_probs=75.6
Q ss_pred EeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHhCCC--CceeeEEEecccceecCC---cccccccccCCCCCc
Q 011867 342 VRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDILDPD--RMLIARRAYRESCIFSDG---SYAKDLTILGVDLAR 415 (476)
Q Consensus 342 Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~LDP~--~k~F~~rL~Re~c~~~~g---~yvKDLs~Lgrdl~~ 415 (476)
+.+.||+.+||+++. +++.++|.|++...++..+++.+.-. ..+|... ..+++...++ .|.+-+..+|.++++
T Consensus 143 ~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v-~~~~~~~~KP~p~~~~~a~~~~~~~p~~ 221 (286)
T PLN02779 143 LPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVF-AGDDVPKKKPDPDIYNLAAETLGVDPSR 221 (286)
T ss_pred CCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEE-eccccCCCCCCHHHHHHHHHHhCcChHH
Confidence 468999999999998 67999999999999999999876321 1223332 4555544443 567788889999999
Q ss_pred EEEEECChhhhccCCCceeeeeeec
Q 011867 416 IAIIDNSPQVFRLQLDNGIPIKSWF 440 (476)
Q Consensus 416 vIIIDDsp~~~~~qp~NgI~I~~f~ 440 (476)
+|+|+|++.-+..-..+|++.....
T Consensus 222 ~l~IGDs~~Di~aA~~aG~~~i~v~ 246 (286)
T PLN02779 222 CVVVEDSVIGLQAAKAAGMRCIVTK 246 (286)
T ss_pred EEEEeCCHHhHHHHHHcCCEEEEEc
Confidence 9999999998877667787766553
No 79
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=96.95 E-value=0.0021 Score=58.02 Aligned_cols=73 Identities=19% Similarity=0.185 Sum_probs=53.2
Q ss_pred eEEEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cCceEEEEcCCchHHHH---------
Q 011867 304 VTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVA-EMFEIIVFTASESVYAE--------- 373 (476)
Q Consensus 304 ktLVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~--------- 373 (476)
|.+++||||||+..... .+ . .....|.+.+.|+++. +.++|+++|+-......
T Consensus 2 K~i~~DiDGTL~~~~~~-----~y-----------~-~~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~~n~~~i~~~ 64 (126)
T TIGR01689 2 KRLVMDLDNTITLTENG-----DY-----------A-NVAPILAVIEKLRHYKALGFEIVISSSRNMRTYEGNVGKINIH 64 (126)
T ss_pred CEEEEeCCCCcccCCCC-----cc-----------c-ccccCHHHHHHHHHHHHCCCEEEEECCCCchhhhccccccchh
Confidence 47999999999764210 00 0 1346889999999985 78999999999888776
Q ss_pred ---HHHHHhCCCCceeeEEEecc
Q 011867 374 ---KLLDILDPDRMLIARRAYRE 393 (476)
Q Consensus 374 ---~ILd~LDP~~k~F~~rL~Re 393 (476)
.+++.|+.++--+...+.|.
T Consensus 65 ~~~~t~~wL~k~~ipYd~l~~~k 87 (126)
T TIGR01689 65 TLPIIILWLNQHNVPYDEIYVGK 87 (126)
T ss_pred hHHHHHHHHHHcCCCCceEEeCC
Confidence 77777877765556666654
No 80
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=96.89 E-value=0.00048 Score=66.43 Aligned_cols=82 Identities=11% Similarity=0.121 Sum_probs=57.6
Q ss_pred EeeCchHHHHHHHhhcCceEEEEcCCchHHHHHHHHHhCCCCceeeEEEeccc-ceec---------CCcccccccccCC
Q 011867 342 VRQRPFLRTFLERVAEMFEIIVFTASESVYAEKLLDILDPDRMLIARRAYRES-CIFS---------DGSYAKDLTILGV 411 (476)
Q Consensus 342 Vk~RPgl~eFL~~Ls~~yEIvIfTas~~~YA~~ILd~LDP~~k~F~~rL~Re~-c~~~---------~g~yvKDLs~Lgr 411 (476)
+.++||+.+||+.+.+.+.++|.|++...+++++++.++... +|..++--+. -..+ +...++.+...|
T Consensus 67 i~l~pga~ell~~lk~~~~~~IVS~~~~~~~~~il~~lgi~~-~~an~l~~~~~g~~tG~~~~~~~~K~~~l~~l~~~~- 144 (203)
T TIGR02137 67 LKPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMRQLGFPT-LLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLY- 144 (203)
T ss_pred CCCCccHHHHHHHHHhCCeEEEEeCChHHHHHHHHHHcCCch-hhceeeEEecCCeeECeeecCcchHHHHHHHHHhhC-
Confidence 568999999999999778999999999999999999999765 6765554322 1111 112233333333
Q ss_pred CCCcEEEEECChhhhc
Q 011867 412 DLARIAIIDNSPQVFR 427 (476)
Q Consensus 412 dl~~vIIIDDsp~~~~ 427 (476)
.+++.|-|+..-..
T Consensus 145 --~~~v~vGDs~nDl~ 158 (203)
T TIGR02137 145 --YRVIAAGDSYNDTT 158 (203)
T ss_pred --CCEEEEeCCHHHHH
Confidence 36888888887443
No 81
>PLN02811 hydrolase
Probab=96.88 E-value=0.0012 Score=63.35 Aligned_cols=97 Identities=9% Similarity=0.063 Sum_probs=74.2
Q ss_pred EeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHH-HHHhCCCCceeeEEEecc--cceecCC---cccccccccC---C
Q 011867 342 VRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKL-LDILDPDRMLIARRAYRE--SCIFSDG---SYAKDLTILG---V 411 (476)
Q Consensus 342 Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~I-Ld~LDP~~k~F~~rL~Re--~c~~~~g---~yvKDLs~Lg---r 411 (476)
+.+.||+.++|+.|+ ..+.++|.|++.+.++... ++..... .+|...++.+ ++...|+ .|.+-+..++ .
T Consensus 77 ~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~-~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~ 155 (220)
T PLN02811 77 SDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELF-SLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDGPV 155 (220)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHH-hhCCEEEECChhhccCCCCCcHHHHHHHHHhCCCCC
Confidence 457899999999998 6799999999988766543 3332322 3788888887 6655444 6778888886 8
Q ss_pred CCCcEEEEECChhhhccCCCceeeeeee
Q 011867 412 DLARIAIIDNSPQVFRLQLDNGIPIKSW 439 (476)
Q Consensus 412 dl~~vIIIDDsp~~~~~qp~NgI~I~~f 439 (476)
.++++|+|+|++.-+......|++....
T Consensus 156 ~~~~~v~IgDs~~di~aA~~aG~~~i~v 183 (220)
T PLN02811 156 DPGKVLVFEDAPSGVEAAKNAGMSVVMV 183 (220)
T ss_pred CccceEEEeccHhhHHHHHHCCCeEEEE
Confidence 8999999999999887766778777655
No 82
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=96.88 E-value=0.00052 Score=70.90 Aligned_cols=96 Identities=15% Similarity=0.148 Sum_probs=67.3
Q ss_pred EEeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHhCCCCceeeEEEecc----------ccee--cCCcccccc-
Q 011867 341 YVRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDILDPDRMLIARRAYRE----------SCIF--SDGSYAKDL- 406 (476)
Q Consensus 341 ~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~LDP~~k~F~~rL~Re----------~c~~--~~g~yvKDL- 406 (476)
.+.++||+.++|+.+. ..+.++|.|++...+++.+++.++... .+...+--. .+.. .|...++.+
T Consensus 179 ~l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~-~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~~la 257 (322)
T PRK11133 179 NLPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDA-AVANELEIMDGKLTGNVLGDIVDAQYKADTLTRLA 257 (322)
T ss_pred hCCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCe-EEEeEEEEECCEEEeEecCccCCcccHHHHHHHHH
Confidence 3668999999999999 679999999999999999999987654 333332111 1111 122223333
Q ss_pred cccCCCCCcEEEEECChhhhccCCCceeeee
Q 011867 407 TILGVDLARIAIIDNSPQVFRLQLDNGIPIK 437 (476)
Q Consensus 407 s~Lgrdl~~vIIIDDsp~~~~~qp~NgI~I~ 437 (476)
+.+|.++++||.|-|+..-..+-...|+.|.
T Consensus 258 ~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA 288 (322)
T PRK11133 258 QEYEIPLAQTVAIGDGANDLPMIKAAGLGIA 288 (322)
T ss_pred HHcCCChhhEEEEECCHHHHHHHHHCCCeEE
Confidence 4678899999999999987665445566554
No 83
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=96.81 E-value=0.0025 Score=59.22 Aligned_cols=94 Identities=13% Similarity=0.164 Sum_probs=67.3
Q ss_pred EeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHhCCCCceeeEEEecccceecCC-------------ccccccc
Q 011867 342 VRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDILDPDRMLIARRAYRESCIFSDG-------------SYAKDLT 407 (476)
Q Consensus 342 Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~LDP~~k~F~~rL~Re~c~~~~g-------------~yvKDLs 407 (476)
+..+||+.++|+.+. +.+.++|.|++...+++.+++.++... +|...+..+.....++ .+.+-+.
T Consensus 79 ~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~-~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~~~ 157 (201)
T TIGR01491 79 ISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDY-VYSNELVFDEKGFIQPDGIVRVTFDNKGEAVERLKR 157 (201)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCe-EEEEEEEEcCCCeEecceeeEEccccHHHHHHHHHH
Confidence 567999999999998 679999999999999999999998764 6766654322111111 1112234
Q ss_pred ccCCCCCcEEEEECChhhhccCCCceeee
Q 011867 408 ILGVDLARIAIIDNSPQVFRLQLDNGIPI 436 (476)
Q Consensus 408 ~Lgrdl~~vIIIDDsp~~~~~qp~NgI~I 436 (476)
.+|.+++++++|.|+..-...-...|+++
T Consensus 158 ~~~~~~~~~i~iGDs~~D~~~a~~ag~~~ 186 (201)
T TIGR01491 158 ELNPSLTETVAVGDSKNDLPMFEVADISI 186 (201)
T ss_pred HhCCCHHHEEEEcCCHhHHHHHHhcCCeE
Confidence 56888999999999987655443455544
No 84
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=96.79 E-value=0.0013 Score=61.72 Aligned_cols=90 Identities=13% Similarity=0.047 Sum_probs=69.8
Q ss_pred eeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHhCCCCceeeEEEecccceecCC---cccccccccCCCCCcEEE
Q 011867 343 RQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDILDPDRMLIARRAYRESCIFSDG---SYAKDLTILGVDLARIAI 418 (476)
Q Consensus 343 k~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~LDP~~k~F~~rL~Re~c~~~~g---~yvKDLs~Lgrdl~~vII 418 (476)
...||+.++|++|. +.+.++|.|++... +..+++.++-.+ +|...+..+++...++ .|.+-++.+|.+++++|+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~-~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~~~~~~~ 182 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLE-YFDFVVTSYEVGAEKPDPKIFQEALERAGISPEEALH 182 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHH-hcceEEeecccCCCCCCHHHHHHHHHHcCCChhHEEE
Confidence 56899999999998 56999999998765 477888887654 7888888777665554 477888889999999999
Q ss_pred EECCh-hhhccCCCcee
Q 011867 419 IDNSP-QVFRLQLDNGI 434 (476)
Q Consensus 419 IDDsp-~~~~~qp~NgI 434 (476)
|+|++ .-.......|+
T Consensus 183 IgD~~~~Di~~A~~aG~ 199 (203)
T TIGR02252 183 IGDSLRNDYQGARAAGW 199 (203)
T ss_pred ECCCchHHHHHHHHcCC
Confidence 99997 34433333444
No 85
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=96.76 E-value=0.0029 Score=61.93 Aligned_cols=96 Identities=11% Similarity=0.049 Sum_probs=68.6
Q ss_pred CceEEEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cCceEEEEcCCchHHHH--HHHHH
Q 011867 302 KRVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVA-EMFEIIVFTASESVYAE--KLLDI 378 (476)
Q Consensus 302 kKktLVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~--~ILd~ 378 (476)
+..+++||+||||.+.. ..-||+.++|++|. +++.++|.|++.+..++ ..++.
T Consensus 7 ~~~~~~~D~dG~l~~~~------------------------~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~ 62 (242)
T TIGR01459 7 DYDVFLLDLWGVIIDGN------------------------HTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKS 62 (242)
T ss_pred cCCEEEEecccccccCC------------------------ccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHH
Confidence 45689999999998752 25799999999999 68999999999887776 77888
Q ss_pred hCCCCceeeEEEecccceecCCccc-ccccccCCCCCcEEEEECChh
Q 011867 379 LDPDRMLIARRAYRESCIFSDGSYA-KDLTILGVDLARIAIIDNSPQ 424 (476)
Q Consensus 379 LDP~~k~F~~rL~Re~c~~~~g~yv-KDLs~Lgrdl~~vIIIDDsp~ 424 (476)
++....+|...+....... .++ .-++.++..++++++|-|+..
T Consensus 63 ~gl~~~~~~~Ii~s~~~~~---~~l~~~~~~~~~~~~~~~~vGd~~~ 106 (242)
T TIGR01459 63 LGINADLPEMIISSGEIAV---QMILESKKRFDIRNGIIYLLGHLEN 106 (242)
T ss_pred CCCCccccceEEccHHHHH---HHHHhhhhhccCCCceEEEeCCccc
Confidence 8865325777776554322 122 223445566677888877653
No 86
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=96.76 E-value=0.0026 Score=60.04 Aligned_cols=115 Identities=14% Similarity=0.130 Sum_probs=72.0
Q ss_pred CCceEEEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHh
Q 011867 301 RKRVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDIL 379 (476)
Q Consensus 301 ~kKktLVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~L 379 (476)
++.+++++|+||||++...-.. ..+ .....+.. |.+ .=++.+. +.++++|.|......+..+++.+
T Consensus 19 ~~ikli~~D~Dgtl~~~~i~~~-~~~---------~~~~~~~~-~d~--~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~l 85 (183)
T PRK09484 19 ENIRLLICDVDGVFSDGLIYMG-NNG---------EELKAFNV-RDG--YGIRCLLTSGIEVAIITGRKSKLVEDRMTTL 85 (183)
T ss_pred hCceEEEEcCCeeeecCEEEEc-CCC---------CEEEEEec-cch--HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHc
Confidence 4578999999999998631000 000 11111111 221 1233444 78999999999999999999998
Q ss_pred CCCCceeeEEEecccceecCC-cccccccccCCCCCcEEEEECChhhhccCCCceeee
Q 011867 380 DPDRMLIARRAYRESCIFSDG-SYAKDLTILGVDLARIAIIDNSPQVFRLQLDNGIPI 436 (476)
Q Consensus 380 DP~~k~F~~rL~Re~c~~~~g-~yvKDLs~Lgrdl~~vIIIDDsp~~~~~qp~NgI~I 436 (476)
+... +|.. ...+. .+.+-+..+|.+++.|++|-|++.-...-...|+.+
T Consensus 86 gl~~-~f~g-------~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~ 135 (183)
T PRK09484 86 GITH-LYQG-------QSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSV 135 (183)
T ss_pred CCce-eecC-------CCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeE
Confidence 7654 4431 11122 344555677999999999999988665443445554
No 87
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=96.75 E-value=0.0023 Score=60.70 Aligned_cols=84 Identities=14% Similarity=0.091 Sum_probs=75.7
Q ss_pred EeeCchHHHHHHHhhcCceEEEEcCCchHHHHHHHHHhCCCCceeeEEEecccceecCC---cccccccccCCCCCcEEE
Q 011867 342 VRQRPFLRTFLERVAEMFEIIVFTASESVYAEKLLDILDPDRMLIARRAYRESCIFSDG---SYAKDLTILGVDLARIAI 418 (476)
Q Consensus 342 Vk~RPgl~eFL~~Ls~~yEIvIfTas~~~YA~~ILd~LDP~~k~F~~rL~Re~c~~~~g---~yvKDLs~Lgrdl~~vII 418 (476)
+...|++.++|+.+.+.|.++|.|.+...++...+..++.. .+|...++.+.....|+ .|..-+..+|.+++++++
T Consensus 98 ~~~~~~~~~~L~~l~~~~~l~ilTNg~~~~~~~~l~~~gl~-~~Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~~p~~~l~ 176 (229)
T COG1011 98 LPDYPEALEALKELGKKYKLGILTNGARPHQERKLRQLGLL-DYFDAVFISEDVGVAKPDPEIFEYALEKLGVPPEEALF 176 (229)
T ss_pred CccChhHHHHHHHHHhhccEEEEeCCChHHHHHHHHHcCCh-hhhheEEEecccccCCCCcHHHHHHHHHcCCCcceEEE
Confidence 67789999999999977999999999999999999999954 48999999998887775 788889999999999999
Q ss_pred EECChhhh
Q 011867 419 IDNSPQVF 426 (476)
Q Consensus 419 IDDsp~~~ 426 (476)
|||+...-
T Consensus 177 VgD~~~~d 184 (229)
T COG1011 177 VGDSLEND 184 (229)
T ss_pred ECCChhhh
Confidence 99999866
No 88
>PRK08238 hypothetical protein; Validated
Probab=96.74 E-value=0.0036 Score=68.04 Aligned_cols=76 Identities=14% Similarity=0.085 Sum_probs=53.9
Q ss_pred EeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHhCCCCceeeEEEecccceecCCcccccc---cccCCCCCcEE
Q 011867 342 VRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDILDPDRMLIARRAYRESCIFSDGSYAKDL---TILGVDLARIA 417 (476)
Q Consensus 342 Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~LDP~~k~F~~rL~Re~c~~~~g~yvKDL---s~Lgrdl~~vI 417 (476)
...+|++.++|+++. +++.++|.|++.+.++++++++++. |+..+..+.....++.- |-. +.++ .++++
T Consensus 71 lp~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGl----Fd~Vigsd~~~~~kg~~-K~~~l~~~l~--~~~~~ 143 (479)
T PRK08238 71 LPYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGL----FDGVFASDGTTNLKGAA-KAAALVEAFG--ERGFD 143 (479)
T ss_pred CCCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC----CCEEEeCCCccccCCch-HHHHHHHHhC--ccCee
Confidence 357899999999998 7899999999999999999999854 66666655443332211 111 1223 34577
Q ss_pred EEECChh
Q 011867 418 IIDNSPQ 424 (476)
Q Consensus 418 IIDDsp~ 424 (476)
.+-|+..
T Consensus 144 yvGDS~~ 150 (479)
T PRK08238 144 YAGNSAA 150 (479)
T ss_pred EecCCHH
Confidence 7788775
No 89
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=96.47 E-value=0.003 Score=61.87 Aligned_cols=96 Identities=14% Similarity=0.067 Sum_probs=71.1
Q ss_pred EEeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHhC---CCCceeeEEEecccceecC-CcccccccccCCCCCc
Q 011867 341 YVRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDILD---PDRMLIARRAYRESCIFSD-GSYAKDLTILGVDLAR 415 (476)
Q Consensus 341 ~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~LD---P~~k~F~~rL~Re~c~~~~-g~yvKDLs~Lgrdl~~ 415 (476)
...+.|++.++|+++. +++.++|+|++.......+++..+ -. .+|...+....+...+ ..|.+-+..+|.++++
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~-~~f~~~fd~~~g~KP~p~~y~~i~~~lgv~p~e 171 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLT-PYFSGYFDTTVGLKTEAQSYVKIAGQLGSPPRE 171 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchh-hhcceEEEeCcccCCCHHHHHHHHHHhCcChhH
Confidence 3457899999999998 789999999999999998888763 22 2455544222121111 2678888899999999
Q ss_pred EEEEECChhhhccCCCceeeee
Q 011867 416 IAIIDNSPQVFRLQLDNGIPIK 437 (476)
Q Consensus 416 vIIIDDsp~~~~~qp~NgI~I~ 437 (476)
+++|+|++.........|+...
T Consensus 172 ~lfVgDs~~Di~AA~~AG~~ti 193 (220)
T TIGR01691 172 ILFLSDIINELDAARKAGLHTG 193 (220)
T ss_pred EEEEeCCHHHHHHHHHcCCEEE
Confidence 9999999987766556677654
No 90
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=96.19 E-value=0.0015 Score=59.88 Aligned_cols=77 Identities=9% Similarity=0.081 Sum_probs=65.6
Q ss_pred EeeCchHHHHHHHhhcCceEEEEcCCchHHHHHHHHHhCCCCceeeEEEecccceecCC---cccccccccCCCCCcEEE
Q 011867 342 VRQRPFLRTFLERVAEMFEIIVFTASESVYAEKLLDILDPDRMLIARRAYRESCIFSDG---SYAKDLTILGVDLARIAI 418 (476)
Q Consensus 342 Vk~RPgl~eFL~~Ls~~yEIvIfTas~~~YA~~ILd~LDP~~k~F~~rL~Re~c~~~~g---~yvKDLs~Lgrdl~~vII 418 (476)
+..+||+.++|+. ++|.|++...+++.+++.++... +|...++.+.....|+ .|.+-++++|.+++++++
T Consensus 89 ~~~~~g~~~~L~~------~~i~Tn~~~~~~~~~l~~~~l~~-~fd~v~~~~~~~~~KP~p~~f~~~~~~~~~~p~~~l~ 161 (175)
T TIGR01493 89 LPPWPDSAAALAR------VAILSNASHWAFDQFAQQAGLPW-YFDRAFSVDTVRAYKPDPVVYELVFDTVGLPPDRVLM 161 (175)
T ss_pred CCCCCchHHHHHH------HhhhhCCCHHHHHHHHHHCCCHH-HHhhhccHhhcCCCCCCHHHHHHHHHHHCCCHHHeEe
Confidence 5579999999993 78999999999999999998765 7888888777666664 678889999999999999
Q ss_pred EECChhh
Q 011867 419 IDNSPQV 425 (476)
Q Consensus 419 IDDsp~~ 425 (476)
|+|++.-
T Consensus 162 vgD~~~D 168 (175)
T TIGR01493 162 VAAHQWD 168 (175)
T ss_pred EecChhh
Confidence 9999753
No 91
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=96.16 E-value=0.0041 Score=60.50 Aligned_cols=84 Identities=17% Similarity=0.250 Sum_probs=63.5
Q ss_pred EeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHhCCCCceeeEEEecccceecC---Cc------ccccc----c
Q 011867 342 VRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDILDPDRMLIARRAYRESCIFSD---GS------YAKDL----T 407 (476)
Q Consensus 342 Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~LDP~~k~F~~rL~Re~c~~~~---g~------yvKDL----s 407 (476)
.+++||+.+.++.+. ..+.++|.|++...+++++.+.|+... .+..++-.++-.++. |. ..+-| +
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~-~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~~~ 154 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDY-VVANELEIDDGKLTGRVVGPICDGEGKAKALRELAA 154 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCch-heeeEEEEeCCEEeceeeeeecCcchHHHHHHHHHH
Confidence 789999999999999 679999999999999999999999876 567777655411221 11 11122 2
Q ss_pred ccCCCCCcEEEEECChhhh
Q 011867 408 ILGVDLARIAIIDNSPQVF 426 (476)
Q Consensus 408 ~Lgrdl~~vIIIDDsp~~~ 426 (476)
.+|.++++++-+=|+..-.
T Consensus 155 ~~g~~~~~~~a~gDs~nDl 173 (212)
T COG0560 155 ELGIPLEETVAYGDSANDL 173 (212)
T ss_pred HcCCCHHHeEEEcCchhhH
Confidence 3588889999999887644
No 92
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=95.99 E-value=0.022 Score=55.97 Aligned_cols=59 Identities=24% Similarity=0.251 Sum_probs=52.0
Q ss_pred CceEEEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHhC
Q 011867 302 KRVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDILD 380 (476)
Q Consensus 302 kKktLVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~LD 380 (476)
.++.+++||||||+.+.. ..+|...+.|+++. +.+.++|.|......+.++++.|.
T Consensus 2 ~~kli~~DlDGTLl~~~~-----------------------~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~ 58 (264)
T COG0561 2 MIKLLAFDLDGTLLDSNK-----------------------TISPETKEALARLREKGVKVVLATGRPLPDVLSILEELG 58 (264)
T ss_pred CeeEEEEcCCCCccCCCC-----------------------ccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcC
Confidence 367899999999998843 16899999999886 899999999999999999999998
Q ss_pred CCC
Q 011867 381 PDR 383 (476)
Q Consensus 381 P~~ 383 (476)
...
T Consensus 59 ~~~ 61 (264)
T COG0561 59 LDG 61 (264)
T ss_pred CCc
Confidence 875
No 93
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=95.95 E-value=0.007 Score=61.14 Aligned_cols=117 Identities=15% Similarity=0.136 Sum_probs=67.2
Q ss_pred CCceEEEEecccccccccCC----CCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cCceEEEEcCCchHHHH--
Q 011867 301 RKRVTLVLDLDETLVHSSTE----PCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVA-EMFEIIVFTASESVYAE-- 373 (476)
Q Consensus 301 ~kKktLVLDLDgTLVhS~~~----~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~-- 373 (476)
.+++.+|||||||+++...- ......|.- -.+..-........-||+.+||+++. ++..++|.|.....+.+
T Consensus 73 ~kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~-~~w~~wv~~~~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T 151 (266)
T TIGR01533 73 DKKYAIVLDLDETVLDNSPYQGYQVLNNKPFDP-ETWDKWVQAAQAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAAT 151 (266)
T ss_pred CCCCEEEEeCccccccChHHHHHHhcCCCcCCH-HHHHHHHHcCCCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHH
Confidence 45789999999999987631 001111100 00000001122446799999999997 77999999998866555
Q ss_pred -HHHHHhCCCCceeeEEEecccceecCCcccccccc--c--CCCCCcEEEEECChhhh
Q 011867 374 -KLLDILDPDRMLIARRAYRESCIFSDGSYAKDLTI--L--GVDLARIAIIDNSPQVF 426 (476)
Q Consensus 374 -~ILd~LDP~~k~F~~rL~Re~c~~~~g~yvKDLs~--L--grdl~~vIIIDDsp~~~ 426 (476)
..|..++.....+.+.++|+.- . -|..++ + +.+. +++|.|+..-|
T Consensus 152 ~~~Lkk~Gi~~~~~d~lllr~~~-~-----~K~~rr~~I~~~y~I--vl~vGD~~~Df 201 (266)
T TIGR01533 152 LKNLKRFGFPQADEEHLLLKKDK-S-----SKESRRQKVQKDYEI--VLLFGDNLLDF 201 (266)
T ss_pred HHHHHHcCcCCCCcceEEeCCCC-C-----CcHHHHHHHHhcCCE--EEEECCCHHHh
Confidence 4555555443334677777532 1 122221 1 2233 77777776655
No 94
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=95.80 E-value=0.018 Score=54.27 Aligned_cols=114 Identities=11% Similarity=0.128 Sum_probs=74.1
Q ss_pred CceEEEEecccccccccCCCCCCCCceeEEEecceee-eEEEeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHh
Q 011867 302 KRVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEH-TVYVRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDIL 379 (476)
Q Consensus 302 kKktLVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~-~~~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~L 379 (476)
.-+++|||+||+|-+-+. .+...+. ...+..|-+.- ++.|. +++.++|.|+....+++.+++.+
T Consensus 6 ~i~~~v~d~dGv~tdg~~------------~~~~~g~~~~~~~~~D~~~--~~~L~~~Gi~laIiT~k~~~~~~~~l~~l 71 (169)
T TIGR02726 6 NIKLVILDVDGVMTDGRI------------VINDEGIESRNFDIKDGMG--VIVLQLCGIDVAIITSKKSGAVRHRAEEL 71 (169)
T ss_pred cCeEEEEeCceeeECCeE------------EEcCCCcEEEEEecchHHH--HHHHHHCCCEEEEEECCCcHHHHHHHHHC
Confidence 468999999999987632 1111111 22233454443 23333 68999999999999999999999
Q ss_pred CCCCceeeEEEecccceecCC-cccccccccCCCCCcEEEEECChhhhccCCCceeeee
Q 011867 380 DPDRMLIARRAYRESCIFSDG-SYAKDLTILGVDLARIAIIDNSPQVFRLQLDNGIPIK 437 (476)
Q Consensus 380 DP~~k~F~~rL~Re~c~~~~g-~yvKDLs~Lgrdl~~vIIIDDsp~~~~~qp~NgI~I~ 437 (476)
+... +|... ..+. .+.+-+..++.++++|+.|.|++.-...-...|+.+.
T Consensus 72 gi~~-~f~~~-------kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~a 122 (169)
T TIGR02726 72 KIKR-FHEGI-------KKKTEPYAQMLEEMNISDAEVCYVGDDLVDLSMMKRVGLAVA 122 (169)
T ss_pred CCcE-EEecC-------CCCHHHHHHHHHHcCcCHHHEEEECCCHHHHHHHHHCCCeEE
Confidence 8764 56432 1121 3445556778899999999999876544333444433
No 95
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=95.67 E-value=0.036 Score=55.15 Aligned_cols=57 Identities=21% Similarity=0.211 Sum_probs=47.8
Q ss_pred ceEEEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHhCC
Q 011867 303 RVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDILDP 381 (476)
Q Consensus 303 KktLVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~LDP 381 (476)
.+.+++||||||+.+.. ...|...+.|+.+. +.+.++|.|......+..+++.++.
T Consensus 4 ~kli~~DlDGTLl~~~~-----------------------~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l 60 (273)
T PRK00192 4 KLLVFTDLDGTLLDHHT-----------------------YSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGL 60 (273)
T ss_pred ceEEEEcCcccCcCCCC-----------------------cCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCC
Confidence 57899999999997521 14577899999999 5799999999999999999999875
Q ss_pred C
Q 011867 382 D 382 (476)
Q Consensus 382 ~ 382 (476)
.
T Consensus 61 ~ 61 (273)
T PRK00192 61 E 61 (273)
T ss_pred C
Confidence 4
No 96
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=95.55 E-value=0.032 Score=52.53 Aligned_cols=54 Identities=24% Similarity=0.300 Sum_probs=45.9
Q ss_pred EEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHhCCC
Q 011867 306 LVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDILDPD 382 (476)
Q Consensus 306 LVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~LDP~ 382 (476)
|++||||||+++... .-|...+.|+.+. ++..++|.|......+..++..+.-.
T Consensus 1 i~~DlDGTLl~~~~~-----------------------i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~ 55 (254)
T PF08282_consen 1 IFSDLDGTLLNSDGK-----------------------ISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGID 55 (254)
T ss_dssp EEEECCTTTCSTTSS-----------------------SCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHC
T ss_pred cEEEECCceecCCCe-----------------------eCHHHHHHHHhhcccceEEEEEccCcccccccccccccch
Confidence 689999999986421 4588889999988 89999999999999999999977644
No 97
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=95.54 E-value=0.027 Score=52.39 Aligned_cols=104 Identities=19% Similarity=0.194 Sum_probs=57.4
Q ss_pred eEEEEecccccccccCCCC---CCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cCceEEEEcCCc---h-------
Q 011867 304 VTLVLDLDETLVHSSTEPC---DDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVA-EMFEIIVFTASE---S------- 369 (476)
Q Consensus 304 ktLVLDLDgTLVhS~~~~~---~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~---~------- 369 (476)
|.+.|||||||+....... ...| +..+-|++.+-|+++. +.|.|||+|.-. .
T Consensus 1 Kia~fD~DgTLi~~~s~~~f~~~~~D--------------~~~~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~ 66 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKSGKKFPKDPDD--------------WKFFPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDL 66 (159)
T ss_dssp SEEEE-SCTTTEE-STSTTS-SSTCG--------------GEEC-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHH
T ss_pred CEEEEeCCCCccCCCCCCcCcCCHHH--------------hhhcchhHHHHHHHHHhcCCeEEEEeCccccccccccchH
Confidence 4789999999999865322 1122 2346788999999999 689999999641 1
Q ss_pred ----HHHHHHHHHhCCCCceeeEEEecccceecCC---cccccccccC----CCCCcEEEEECChh
Q 011867 370 ----VYAEKLLDILDPDRMLIARRAYRESCIFSDG---SYAKDLTILG----VDLARIAIIDNSPQ 424 (476)
Q Consensus 370 ----~YA~~ILd~LDP~~k~F~~rL~Re~c~~~~g---~yvKDLs~Lg----rdl~~vIIIDDsp~ 424 (476)
...+.+++.|+-. +...+...+..+.++ .+..-++.++ .|+++.++|=|++.
T Consensus 67 ~~~~~ki~~il~~l~ip---~~~~~a~~~d~~RKP~~GM~~~~~~~~~~~~~id~~~Sf~VGDaag 129 (159)
T PF08645_consen 67 ENFHEKIENILKELGIP---IQVYAAPHKDPCRKPNPGMWEFALKDYNDGVEIDLANSFYVGDAAG 129 (159)
T ss_dssp HHHHHHHHHHHHHCTS----EEEEECGCSSTTSTTSSHHHHHHCCCTSTT--S-CCC-EEEESSCH
T ss_pred HHHHHHHHHHHHHcCCc---eEEEecCCCCCCCCCchhHHHHHHHhccccccccccceEEEeccCC
Confidence 2334455555322 222222222223332 3333333333 58999999998743
No 98
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=95.49 E-value=0.044 Score=54.48 Aligned_cols=59 Identities=20% Similarity=0.246 Sum_probs=48.0
Q ss_pred CCceEEEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHh
Q 011867 301 RKRVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDIL 379 (476)
Q Consensus 301 ~kKktLVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~L 379 (476)
+.++.+++||||||++... ..-|-..+-|+++. ++..++|.|......+.++++.|
T Consensus 5 ~~~~lI~~DlDGTLL~~~~-----------------------~i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l 61 (271)
T PRK03669 5 QDPLLIFTDLDGTLLDSHT-----------------------YDWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTL 61 (271)
T ss_pred CCCeEEEEeCccCCcCCCC-----------------------cCcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHh
Confidence 5678999999999998621 02345677788888 67999999999999999999998
Q ss_pred CCC
Q 011867 380 DPD 382 (476)
Q Consensus 380 DP~ 382 (476)
+..
T Consensus 62 ~~~ 64 (271)
T PRK03669 62 GLQ 64 (271)
T ss_pred CCC
Confidence 764
No 99
>PTZ00445 p36-lilke protein; Provisional
Probab=95.41 E-value=0.025 Score=55.53 Aligned_cols=132 Identities=17% Similarity=0.147 Sum_probs=77.7
Q ss_pred CCceEEEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cCceEEEEcCCchHH--------
Q 011867 301 RKRVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVA-EMFEIIVFTASESVY-------- 371 (476)
Q Consensus 301 ~kKktLVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~Y-------- 371 (476)
.+.+++++|+|.|||..-......++ .....+.-..||.+..+++.|. ..+.|+|.|-+.+..
T Consensus 41 ~GIk~Va~D~DnTlI~~HsgG~~~~~--------~~~~~~~~~~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~ 112 (219)
T PTZ00445 41 CGIKVIASDFDLTMITKHSGGYIDPD--------NDDIRVLTSVTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPR 112 (219)
T ss_pred cCCeEEEecchhhhhhhhcccccCCC--------cchhhhhccCCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCcc
Confidence 67899999999999862111000000 0011122347999999999998 689999999998854
Q ss_pred -------HHHHHHHhCCCCceeeE-----EEecccce-----ecC---Cc--c--cccccccCCCCCcEEEEECChhhhc
Q 011867 372 -------AEKLLDILDPDRMLIAR-----RAYRESCI-----FSD---GS--Y--AKDLTILGVDLARIAIIDNSPQVFR 427 (476)
Q Consensus 372 -------A~~ILd~LDP~~k~F~~-----rL~Re~c~-----~~~---g~--y--vKDLs~Lgrdl~~vIIIDDsp~~~~ 427 (476)
++..|+.=.-.-++-+. +++++.-. ..+ .. | -+=+++.|.+++.+++|||.+.+..
T Consensus 113 ~Isg~~li~~~lk~s~~~~~i~~~~~yyp~~w~~p~~y~~~gl~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~~NVe 192 (219)
T PTZ00445 113 YISGDRMVEAALKKSKCDFKIKKVYAYYPKFWQEPSDYRPLGLDAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDMNNCK 192 (219)
T ss_pred eechHHHHHHHHHhcCccceeeeeeeeCCcccCChhhhhhhcccCCCccchHHHHHHHHHHcCCCHHHeEeecCCHHHHH
Confidence 44444422111111011 11111110 011 12 3 4445566999999999999999886
Q ss_pred cCCCceeeeeeec
Q 011867 428 LQLDNGIPIKSWF 440 (476)
Q Consensus 428 ~qp~NgI~I~~f~ 440 (476)
....-|+...-+.
T Consensus 193 aA~~lGi~ai~f~ 205 (219)
T PTZ00445 193 NALKEGYIALHVT 205 (219)
T ss_pred HHHHCCCEEEEcC
Confidence 6555666655554
No 100
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=95.35 E-value=0.049 Score=51.96 Aligned_cols=57 Identities=12% Similarity=0.170 Sum_probs=47.7
Q ss_pred eEEEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHhCCC
Q 011867 304 VTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDILDPD 382 (476)
Q Consensus 304 ktLVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~LDP~ 382 (476)
+.+++||||||+.... ...|...+-|+++. +.+.++|.|......+.++++.|+..
T Consensus 2 k~v~~DlDGTLl~~~~-----------------------~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~ 58 (215)
T TIGR01487 2 KLVAIDIDGTLTEPNR-----------------------MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTS 58 (215)
T ss_pred cEEEEecCCCcCCCCc-----------------------ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCC
Confidence 5789999999996421 25678888899998 67999999999999999999999876
Q ss_pred C
Q 011867 383 R 383 (476)
Q Consensus 383 ~ 383 (476)
.
T Consensus 59 ~ 59 (215)
T TIGR01487 59 G 59 (215)
T ss_pred C
Confidence 4
No 101
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=95.33 E-value=0.045 Score=53.74 Aligned_cols=57 Identities=14% Similarity=0.214 Sum_probs=47.2
Q ss_pred ceEEEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHhCC
Q 011867 303 RVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDILDP 381 (476)
Q Consensus 303 KktLVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~LDP 381 (476)
.+.+++||||||++... ..-|...+.|+++. +++.++|.|......+.++++.|+.
T Consensus 3 ~kli~~DlDGTLl~~~~-----------------------~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~ 59 (270)
T PRK10513 3 IKLIAIDMDGTLLLPDH-----------------------TISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHM 59 (270)
T ss_pred eEEEEEecCCcCcCCCC-----------------------ccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCC
Confidence 57899999999997631 14566788899988 6799999999999999999999875
Q ss_pred C
Q 011867 382 D 382 (476)
Q Consensus 382 ~ 382 (476)
.
T Consensus 60 ~ 60 (270)
T PRK10513 60 E 60 (270)
T ss_pred C
Confidence 4
No 102
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=95.32 E-value=0.053 Score=53.03 Aligned_cols=58 Identities=24% Similarity=0.286 Sum_probs=45.9
Q ss_pred ceEEEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHhCC
Q 011867 303 RVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDILDP 381 (476)
Q Consensus 303 KktLVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~LDP 381 (476)
.+++++||||||+.... ...|...+-|+++. ++..++|.|.-....+..+++.|+.
T Consensus 3 ~kli~~DlDGTLl~~~~-----------------------~i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l~~ 59 (272)
T PRK10530 3 YRVIALDLDGTLLTPKK-----------------------TILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQALAL 59 (272)
T ss_pred ccEEEEeCCCceECCCC-----------------------ccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCC
Confidence 46899999999997632 14566777888887 6789999999988888888888876
Q ss_pred CC
Q 011867 382 DR 383 (476)
Q Consensus 382 ~~ 383 (476)
..
T Consensus 60 ~~ 61 (272)
T PRK10530 60 DT 61 (272)
T ss_pred CC
Confidence 53
No 103
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=95.26 E-value=0.034 Score=52.71 Aligned_cols=111 Identities=17% Similarity=0.247 Sum_probs=81.4
Q ss_pred CCceEEEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHh
Q 011867 301 RKRVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDIL 379 (476)
Q Consensus 301 ~kKktLVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~L 379 (476)
.+.+.+|+|||+|||-=.. . ..-|-+.+.+..+. ....++|.|...+.-+..++..|
T Consensus 26 ~Gikgvi~DlDNTLv~wd~-----~-----------------~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l 83 (175)
T COG2179 26 HGIKGVILDLDNTLVPWDN-----P-----------------DATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKL 83 (175)
T ss_pred cCCcEEEEeccCceecccC-----C-----------------CCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhc
Confidence 7889999999999985321 0 14688999999999 56999999999999999999999
Q ss_pred CCCCceeeEEEecccceecCCcccccccccCCCCCcEEEEECChh--hhccCCCc--eeeeeeec
Q 011867 380 DPDRMLIARRAYRESCIFSDGSYAKDLTILGVDLARIAIIDNSPQ--VFRLQLDN--GIPIKSWF 440 (476)
Q Consensus 380 DP~~k~F~~rL~Re~c~~~~g~yvKDLs~Lgrdl~~vIIIDDsp~--~~~~qp~N--gI~I~~f~ 440 (476)
|-.. + ++--.. ....+-|.|..++.++++|++|-|.-. ....+-.. .|.|+|-.
T Consensus 84 ~v~f--i-~~A~KP----~~~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~~tIlV~Pl~ 141 (175)
T COG2179 84 GVPF--I-YRAKKP----FGRAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGMRTILVEPLV 141 (175)
T ss_pred CCce--e-ecccCc----cHHHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCcEEEEEEEec
Confidence 8763 1 111000 111467889999999999999999876 44434322 56666654
No 104
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=95.20 E-value=0.07 Score=50.97 Aligned_cols=58 Identities=12% Similarity=0.169 Sum_probs=47.6
Q ss_pred ceEEEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHhCC
Q 011867 303 RVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDILDP 381 (476)
Q Consensus 303 KktLVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~LDP 381 (476)
.+.+++||||||+.+.. ...|...+-|+++. ++..++|.|......+.++++.++.
T Consensus 3 ~kli~~DlDGTLl~~~~-----------------------~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~ 59 (230)
T PRK01158 3 IKAIAIDIDGTITDKDR-----------------------RLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGT 59 (230)
T ss_pred eeEEEEecCCCcCCCCC-----------------------ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCC
Confidence 46899999999997521 15677888899988 6789999999999999999998876
Q ss_pred CC
Q 011867 382 DR 383 (476)
Q Consensus 382 ~~ 383 (476)
..
T Consensus 60 ~~ 61 (230)
T PRK01158 60 SG 61 (230)
T ss_pred CC
Confidence 54
No 105
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=94.98 E-value=0.062 Score=52.48 Aligned_cols=53 Identities=23% Similarity=0.238 Sum_probs=43.8
Q ss_pred EEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHhCCC
Q 011867 306 LVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDILDPD 382 (476)
Q Consensus 306 LVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~LDP~ 382 (476)
+++||||||++... .-|...++|+++. ++..+++.|......+..+++.++..
T Consensus 2 i~~DlDGTLl~~~~------------------------~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 2 IFTDLDGTLLPPGY------------------------EPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred EEEeCCCCCcCCCC------------------------CchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 68899999998421 2356899999999 67999999999999899999988754
No 106
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=94.96 E-value=0.048 Score=46.93 Aligned_cols=50 Identities=20% Similarity=0.229 Sum_probs=37.0
Q ss_pred EEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHh
Q 011867 306 LVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDIL 379 (476)
Q Consensus 306 LVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~L 379 (476)
++||+||||.+.. ..=||+.+||+++. ++..+++.|.+...-.+.+.+.|
T Consensus 1 ~l~D~dGvl~~g~------------------------~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L 51 (101)
T PF13344_consen 1 FLFDLDGVLYNGN------------------------EPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKL 51 (101)
T ss_dssp EEEESTTTSEETT------------------------EE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHH
T ss_pred CEEeCccEeEeCC------------------------CcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHH
Confidence 5899999998742 14699999999999 56999999999855555555444
No 107
>PRK10976 putative hydrolase; Provisional
Probab=94.91 E-value=0.073 Score=52.27 Aligned_cols=58 Identities=19% Similarity=0.258 Sum_probs=45.5
Q ss_pred ceEEEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHhCC
Q 011867 303 RVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDILDP 381 (476)
Q Consensus 303 KktLVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~LDP 381 (476)
.+++++||||||+++.. ..-|...+-|+++. ++..++|.|.-....+.++++.|+.
T Consensus 2 ikli~~DlDGTLl~~~~-----------------------~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~ 58 (266)
T PRK10976 2 YQVVASDLDGTLLSPDH-----------------------TLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEI 58 (266)
T ss_pred ceEEEEeCCCCCcCCCC-----------------------cCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCC
Confidence 36899999999997632 14566777788887 6789999999988888888888876
Q ss_pred CC
Q 011867 382 DR 383 (476)
Q Consensus 382 ~~ 383 (476)
..
T Consensus 59 ~~ 60 (266)
T PRK10976 59 KS 60 (266)
T ss_pred CC
Confidence 53
No 108
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=94.89 E-value=0.075 Score=52.53 Aligned_cols=58 Identities=17% Similarity=0.171 Sum_probs=46.2
Q ss_pred ceEEEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHhCC
Q 011867 303 RVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDILDP 381 (476)
Q Consensus 303 KktLVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~LDP 381 (476)
.+++++||||||+.+.. ..-|...+-|+++. ++..++|.|......+.++++.++.
T Consensus 2 ~kli~~DlDGTLl~~~~-----------------------~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~ 58 (272)
T PRK15126 2 ARLAAFDMDGTLLMPDH-----------------------HLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSL 58 (272)
T ss_pred ccEEEEeCCCcCcCCCC-----------------------cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCC
Confidence 36899999999997631 14566778888888 6789999999999999999988876
Q ss_pred CC
Q 011867 382 DR 383 (476)
Q Consensus 382 ~~ 383 (476)
..
T Consensus 59 ~~ 60 (272)
T PRK15126 59 DA 60 (272)
T ss_pred CC
Confidence 53
No 109
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=94.87 E-value=0.02 Score=55.95 Aligned_cols=90 Identities=10% Similarity=0.060 Sum_probs=67.0
Q ss_pred EeeCchHHHHHHHhhcCceEEEEcCCchHHHHHHHHHhCCCCceeeEEEecccceecCC---cccccccccCCCCCcEEE
Q 011867 342 VRQRPFLRTFLERVAEMFEIIVFTASESVYAEKLLDILDPDRMLIARRAYRESCIFSDG---SYAKDLTILGVDLARIAI 418 (476)
Q Consensus 342 Vk~RPgl~eFL~~Ls~~yEIvIfTas~~~YA~~ILd~LDP~~k~F~~rL~Re~c~~~~g---~yvKDLs~Lgrdl~~vII 418 (476)
+..-||+.++|+.|.+.|.++|.|++... ++.++.. .+|...+..+.....|+ .|.+-++++|.+++++|+
T Consensus 112 ~~~~~gv~~~L~~L~~~~~l~i~Tn~~~~-----~~~~gl~-~~fd~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~ 185 (238)
T PRK10748 112 IDVPQATHDTLKQLAKKWPLVAITNGNAQ-----PELFGLG-DYFEFVLRAGPHGRSKPFSDMYHLAAEKLNVPIGEILH 185 (238)
T ss_pred CCCCccHHHHHHHHHcCCCEEEEECCCch-----HHHCCcH-HhhceeEecccCCcCCCcHHHHHHHHHHcCCChhHEEE
Confidence 44559999999999988999999998765 3555544 37888887666554454 577888889999999999
Q ss_pred EECCh-hhhccCCCceeeee
Q 011867 419 IDNSP-QVFRLQLDNGIPIK 437 (476)
Q Consensus 419 IDDsp-~~~~~qp~NgI~I~ 437 (476)
|.|++ .-......+|+...
T Consensus 186 VGD~~~~Di~~A~~aG~~~i 205 (238)
T PRK10748 186 VGDDLTTDVAGAIRCGMQAC 205 (238)
T ss_pred EcCCcHHHHHHHHHCCCeEE
Confidence 99985 54544445666653
No 110
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=94.87 E-value=0.059 Score=51.66 Aligned_cols=94 Identities=12% Similarity=0.051 Sum_probs=62.3
Q ss_pred EEeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHhCCCCceeeEEEe--cccceecCC---c----------ccc
Q 011867 341 YVRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDILDPDRMLIARRAY--RESCIFSDG---S----------YAK 404 (476)
Q Consensus 341 ~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~LDP~~k~F~~rL~--Re~c~~~~g---~----------yvK 404 (476)
.+.+|||+.+||+.+. +.+.++|.|++...+++++++.+.+...++..++. .+.....++ . ..+
T Consensus 68 ~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~~ 147 (214)
T TIGR03333 68 TAEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKPS 147 (214)
T ss_pred cCcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeCCCCCccccccCCCCCHHH
Confidence 4679999999999999 46999999999999999999998654434443332 111111111 0 112
Q ss_pred cccccCCCCCcEEEEECChhhhccCCCcee
Q 011867 405 DLTILGVDLARIAIIDNSPQVFRLQLDNGI 434 (476)
Q Consensus 405 DLs~Lgrdl~~vIIIDDsp~~~~~qp~NgI 434 (476)
-++.++....++|.|-|+..-+..-...++
T Consensus 148 ~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~ 177 (214)
T TIGR03333 148 LIRKLSEPNDYHIVIGDSVTDVEAAKQSDL 177 (214)
T ss_pred HHHHHhhcCCcEEEEeCCHHHHHHHHhCCe
Confidence 333445567889999999986654333443
No 111
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=94.78 E-value=0.072 Score=52.10 Aligned_cols=55 Identities=20% Similarity=0.313 Sum_probs=45.1
Q ss_pred EEEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHhCCC
Q 011867 305 TLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDILDPD 382 (476)
Q Consensus 305 tLVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~LDP~ 382 (476)
.+++||||||++... ...|...+.|+++. +++.++|.|......+..+++.++..
T Consensus 1 li~~DlDGTLl~~~~-----------------------~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~ 56 (256)
T TIGR00099 1 LIFIDLDGTLLNDDH-----------------------TISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLD 56 (256)
T ss_pred CEEEeCCCCCCCCCC-----------------------ccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 378999999997621 14577888899988 67999999999999999999888765
No 112
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=94.66 E-value=0.096 Score=53.38 Aligned_cols=105 Identities=15% Similarity=0.266 Sum_probs=69.5
Q ss_pred EEeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHhCC---CCceeeEEEec-cc-ceecC-C----cccc-----
Q 011867 341 YVRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDILDP---DRMLIARRAYR-ES-CIFSD-G----SYAK----- 404 (476)
Q Consensus 341 ~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~LDP---~~k~F~~rL~R-e~-c~~~~-g----~yvK----- 404 (476)
.+.+|||+.+||+.|. ....++|+|+|...+++.++..++- ...+++.++-- ++ +..+. + .+.|
T Consensus 119 ~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~~~K~~~v~ 198 (277)
T TIGR01544 119 DVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHTFNKNHDVA 198 (277)
T ss_pred CCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCCCCcccccccHHHHH
Confidence 4678999999999998 6699999999999999999998653 33455666642 22 21111 1 1222
Q ss_pred --cccccC--CCCCcEEEEECChhhhcc-----CCCceeeeeeecCCCChh
Q 011867 405 --DLTILG--VDLARIAIIDNSPQVFRL-----QLDNGIPIKSWFDDPSDC 446 (476)
Q Consensus 405 --DLs~Lg--rdl~~vIIIDDsp~~~~~-----qp~NgI~I~~f~~d~~D~ 446 (476)
....++ .++++||+|.|+..-..+ +.+|-|.| .|..++-+.
T Consensus 199 ~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~i-gfln~~~e~ 248 (277)
T TIGR01544 199 LRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKI-GYLNDRVDE 248 (277)
T ss_pred HHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEE-EecccCHHH
Confidence 122335 688999999999985533 23454444 455555543
No 113
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=94.30 E-value=0.1 Score=48.43 Aligned_cols=62 Identities=18% Similarity=0.223 Sum_probs=42.7
Q ss_pred EEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cCceEEEEcCCchHHHH---HHHHHh
Q 011867 306 LVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVA-EMFEIIVFTASESVYAE---KLLDIL 379 (476)
Q Consensus 306 LVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~---~ILd~L 379 (476)
+++|+||||+.+..... ..+. -++ - +..|++.++++++. +.|.+++.|+.....+. +.+..+
T Consensus 2 VisDIDGTL~~sd~~~~-----~~~~--~~~---~--~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~ 67 (157)
T smart00775 2 VISDIDGTITKSDVLGH-----VVPI--IGK---D--WTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQI 67 (157)
T ss_pred EEEecCCCCcccccccc-----cccc--ccc---C--cCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHh
Confidence 78999999998742100 0000 000 0 35799999999999 68999999999887775 566553
No 114
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=94.28 E-value=0.1 Score=49.85 Aligned_cols=54 Identities=24% Similarity=0.261 Sum_probs=43.7
Q ss_pred EEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHhCCC
Q 011867 306 LVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDILDPD 382 (476)
Q Consensus 306 LVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~LDP~ 382 (476)
+++||||||+++... ..|-..+.|+.+. ++..++|.|......+.++++.++..
T Consensus 2 i~~DlDGTLL~~~~~-----------------------~~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 2 VFSDLDGTLLDSHSY-----------------------DWQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred EEEeCCCCCcCCCCC-----------------------CcHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 789999999976310 1233788999988 67999999999999999999998754
No 115
>PTZ00174 phosphomannomutase; Provisional
Probab=94.08 E-value=0.13 Score=50.60 Aligned_cols=53 Identities=23% Similarity=0.298 Sum_probs=41.3
Q ss_pred CceEEEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHH
Q 011867 302 KRVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLD 377 (476)
Q Consensus 302 kKktLVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd 377 (476)
+.+.+++||||||+++.. ...|...+-|+.+. ++..++|.|.....-+...+.
T Consensus 4 ~~klia~DlDGTLL~~~~-----------------------~is~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~l~ 57 (247)
T PTZ00174 4 KKTILLFDVDGTLTKPRN-----------------------PITQEMKDTLAKLKSKGFKIGVVGGSDYPKIKEQLG 57 (247)
T ss_pred CCeEEEEECcCCCcCCCC-----------------------CCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHh
Confidence 467899999999998732 14577788889888 679999999987776655554
No 116
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=93.93 E-value=0.15 Score=48.43 Aligned_cols=53 Identities=13% Similarity=0.230 Sum_probs=42.8
Q ss_pred EEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHhCC
Q 011867 306 LVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDILDP 381 (476)
Q Consensus 306 LVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~LDP 381 (476)
+++||||||+++.. ...|-..+-|+++. ++..++|.|......+.+++..|+.
T Consensus 1 i~~DlDGTLl~~~~-----------------------~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~ 54 (225)
T TIGR01482 1 IASDIDGTLTDPNR-----------------------AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGT 54 (225)
T ss_pred CeEeccCccCCCCc-----------------------ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCC
Confidence 57999999998631 14566777888888 6799999999999999999988873
No 117
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=93.57 E-value=0.11 Score=47.14 Aligned_cols=84 Identities=18% Similarity=0.281 Sum_probs=57.6
Q ss_pred EEeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHhCCCCceeeEEEecccc-eec-------------CCccccc
Q 011867 341 YVRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDILDPDRMLIARRAYRESC-IFS-------------DGSYAKD 405 (476)
Q Consensus 341 ~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~LDP~~k~F~~rL~Re~c-~~~-------------~g~yvKD 405 (476)
.+.++|++.++|+.+. +.+.++|.|++...+++++++.++... +|..++.-+.. ... |+..++.
T Consensus 71 ~~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~-~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l~~ 149 (177)
T TIGR01488 71 QVALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDD-VFANRLEFDDNGLLTGPIEGQVNPEGECKGKVLKE 149 (177)
T ss_pred cCCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCch-heeeeEEECCCCEEeCccCCcccCCcchHHHHHHH
Confidence 3567999999999998 679999999999999999999987664 66665543211 000 1111222
Q ss_pred -ccccCCCCCcEEEEECChhh
Q 011867 406 -LTILGVDLARIAIIDNSPQV 425 (476)
Q Consensus 406 -Ls~Lgrdl~~vIIIDDsp~~ 425 (476)
+...|.++.+++.|-|+..-
T Consensus 150 ~~~~~~~~~~~~~~iGDs~~D 170 (177)
T TIGR01488 150 LLEESKITLKKIIAVGDSVND 170 (177)
T ss_pred HHHHhCCCHHHEEEEeCCHHH
Confidence 12335567788888887753
No 118
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=93.52 E-value=0.19 Score=49.32 Aligned_cols=55 Identities=24% Similarity=0.199 Sum_probs=44.2
Q ss_pred EEEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHhCCC
Q 011867 305 TLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDILDPD 382 (476)
Q Consensus 305 tLVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~LDP~ 382 (476)
.+++||||||++... ...|...++++.+. +...++|.|......+..+++.++..
T Consensus 1 li~~DlDGTll~~~~-----------------------~~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~ 56 (256)
T TIGR01486 1 WIFTDLDGTLLDPHG-----------------------YDWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLE 56 (256)
T ss_pred CEEEcCCCCCcCCCC-----------------------cCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 378999999998631 02345789999998 56999999999999999999998753
No 119
>PRK10444 UMP phosphatase; Provisional
Probab=93.43 E-value=0.13 Score=51.17 Aligned_cols=53 Identities=21% Similarity=0.350 Sum_probs=44.0
Q ss_pred eEEEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHhC
Q 011867 304 VTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDILD 380 (476)
Q Consensus 304 ktLVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~LD 380 (476)
+++++||||||++.. ..-|+..+||+++. +...+++.|.....-+..+++.|.
T Consensus 2 ~~v~~DlDGtL~~~~------------------------~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~ 55 (248)
T PRK10444 2 KNVICDIDGVLMHDN------------------------VAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFA 55 (248)
T ss_pred cEEEEeCCCceEeCC------------------------eeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHH
Confidence 478999999998862 14699999999999 689999999998877777777664
No 120
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=93.37 E-value=0.17 Score=47.59 Aligned_cols=54 Identities=28% Similarity=0.341 Sum_probs=43.8
Q ss_pred EEEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhhc-CceEEEEcCCchHHHHHHHHHhC
Q 011867 305 TLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVAE-MFEIIVFTASESVYAEKLLDILD 380 (476)
Q Consensus 305 tLVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls~-~yEIvIfTas~~~YA~~ILd~LD 380 (476)
++++|+||||+.... ....|.+.+.|+++.+ ...++|.|......+..++..++
T Consensus 1 li~~D~DgTL~~~~~----------------------~~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 1 LLFFDLDGTLLDPNA----------------------HELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred CEEEeCcCCCcCCCC----------------------CcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 378999999997521 0256889999999994 58999999999999999998753
No 121
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=93.20 E-value=0.14 Score=49.23 Aligned_cols=126 Identities=17% Similarity=0.201 Sum_probs=82.3
Q ss_pred ceEEEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cCceEEEEcCCc------------h
Q 011867 303 RVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVA-EMFEIIVFTASE------------S 369 (476)
Q Consensus 303 KktLVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~------------~ 369 (476)
.++|+||.||||+--... +.- ..-...+.||+.+-|..+. ..|.+||+|.-. .
T Consensus 5 ~k~lflDRDGtin~d~~~------yv~--------~~~~~~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~ 70 (181)
T COG0241 5 QKALFLDRDGTINIDKGD------YVD--------SLDDFQFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFD 70 (181)
T ss_pred CcEEEEcCCCceecCCCc------ccC--------cHHHhccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHH
Confidence 579999999999753210 100 0011347899999999997 679999999822 2
Q ss_pred HHHHHHHHHhCCCCceeeEEEeccc-----ceecCC---cccccccccCCCCCcEEEEECChhhhccCCCc---eeeeee
Q 011867 370 VYAEKLLDILDPDRMLIARRAYRES-----CIFSDG---SYAKDLTILGVDLARIAIIDNSPQVFRLQLDN---GIPIKS 438 (476)
Q Consensus 370 ~YA~~ILd~LDP~~k~F~~rL~Re~-----c~~~~g---~yvKDLs~Lgrdl~~vIIIDDsp~~~~~qp~N---gI~I~~ 438 (476)
.+-+.+++.|--.+.-|..++++.| |.+.++ .+..-++..+.|+++.++|=|+..-..+.... ++.+..
T Consensus 71 ~~~~~m~~~l~~~gv~id~i~~Cph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~~~~~~~ 150 (181)
T COG0241 71 KLHNKMLKILASQGVKIDGILYCPHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIKGVLVLT 150 (181)
T ss_pred HHHHHHHHHHHHcCCccceEEECCCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCCceEEEc
Confidence 2333356666666666899998544 555543 55666677789999999999996533222111 556666
Q ss_pred ecCC
Q 011867 439 WFDD 442 (476)
Q Consensus 439 f~~d 442 (476)
|.+.
T Consensus 151 ~~~~ 154 (181)
T COG0241 151 GIGV 154 (181)
T ss_pred Cccc
Confidence 6544
No 122
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=93.10 E-value=0.26 Score=50.86 Aligned_cols=57 Identities=14% Similarity=0.167 Sum_probs=45.8
Q ss_pred eEEEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHhCCC
Q 011867 304 VTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDILDPD 382 (476)
Q Consensus 304 ktLVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~LDP~ 382 (476)
+.+++||||||+++.. | .-+-+.+-|+++. +...+++.|+-+..-+..+.+.|...
T Consensus 2 KLIftDLDGTLLd~~~---------------------~--~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~ 58 (302)
T PRK12702 2 RLVLSSLDGSLLDLEF---------------------N--SYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLE 58 (302)
T ss_pred cEEEEeCCCCCcCCCC---------------------c--CCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCC
Confidence 6788999999998632 1 2244778889998 67999999999999999999998865
Q ss_pred C
Q 011867 383 R 383 (476)
Q Consensus 383 ~ 383 (476)
.
T Consensus 59 ~ 59 (302)
T PRK12702 59 H 59 (302)
T ss_pred C
Confidence 4
No 123
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=92.50 E-value=0.33 Score=46.02 Aligned_cols=94 Identities=21% Similarity=0.331 Sum_probs=63.8
Q ss_pred CCceEEEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhhcCc-e--EEEEcCC-------chH
Q 011867 301 RKRVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVAEMF-E--IIVFTAS-------ESV 370 (476)
Q Consensus 301 ~kKktLVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls~~y-E--IvIfTas-------~~~ 370 (476)
.+-+.||||+|+||+.... -..-|.+.+.++++.+.| . |+|+|.+ ...
T Consensus 39 ~Gik~li~DkDNTL~~~~~----------------------~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~ 96 (168)
T PF09419_consen 39 KGIKALIFDKDNTLTPPYE----------------------DEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGE 96 (168)
T ss_pred cCceEEEEcCCCCCCCCCc----------------------CcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHH
Confidence 6789999999999985421 125788899999999654 3 9999998 477
Q ss_pred HHHHHHHHhCCCCceeeEEEecccceecCCccccccccc-----CCCCCcEEEEECChh
Q 011867 371 YAEKLLDILDPDRMLIARRAYRESCIFSDGSYAKDLTIL-----GVDLARIAIIDNSPQ 424 (476)
Q Consensus 371 YA~~ILd~LDP~~k~F~~rL~Re~c~~~~g~yvKDLs~L-----grdl~~vIIIDDsp~ 424 (476)
-|+.+-+.|+.. .+.|+--...| +-+-++.+ ...++.+++|-|+-.
T Consensus 97 ~a~~~~~~lgIp--vl~h~~kKP~~------~~~i~~~~~~~~~~~~p~eiavIGDrl~ 147 (168)
T PF09419_consen 97 RAEALEKALGIP--VLRHRAKKPGC------FREILKYFKCQKVVTSPSEIAVIGDRLF 147 (168)
T ss_pred HHHHHHHhhCCc--EEEeCCCCCcc------HHHHHHHHhhccCCCCchhEEEEcchHH
Confidence 788888888743 33443222211 11222222 235899999999875
No 124
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=92.50 E-value=0.49 Score=53.77 Aligned_cols=59 Identities=17% Similarity=0.138 Sum_probs=46.8
Q ss_pred CCceEEEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHh
Q 011867 301 RKRVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDIL 379 (476)
Q Consensus 301 ~kKktLVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~L 379 (476)
++++.+++||||||+++.. ++. +...+-|+.+. ++..++|.|.-....+..+++.|
T Consensus 414 ~~~KLIfsDLDGTLLd~d~---------------------~i~--~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~L 470 (694)
T PRK14502 414 QFKKIVYTDLDGTLLNPLT---------------------YSY--STALDALRLLKDKELPLVFCSAKTMGEQDLYRNEL 470 (694)
T ss_pred ceeeEEEEECcCCCcCCCC---------------------ccC--HHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHc
Confidence 7788999999999998632 111 23566788887 67999999999999999999998
Q ss_pred CCC
Q 011867 380 DPD 382 (476)
Q Consensus 380 DP~ 382 (476)
+..
T Consensus 471 gl~ 473 (694)
T PRK14502 471 GIK 473 (694)
T ss_pred CCC
Confidence 754
No 125
>PLN02645 phosphoglycolate phosphatase
Probab=92.40 E-value=0.21 Score=51.08 Aligned_cols=55 Identities=9% Similarity=0.039 Sum_probs=42.6
Q ss_pred CCceEEEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHh
Q 011867 301 RKRVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDIL 379 (476)
Q Consensus 301 ~kKktLVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~L 379 (476)
.+.++++||+||||++... .=||+.++|+++. +...+++.|.........+++.|
T Consensus 26 ~~~~~~~~D~DGtl~~~~~------------------------~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l 81 (311)
T PLN02645 26 DSVETFIFDCDGVIWKGDK------------------------LIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKF 81 (311)
T ss_pred HhCCEEEEeCcCCeEeCCc------------------------cCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHH
Confidence 3467899999999987521 2399999999998 78999999998866555555444
No 126
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=92.29 E-value=0.25 Score=50.77 Aligned_cols=53 Identities=19% Similarity=0.249 Sum_probs=41.7
Q ss_pred eEEEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhhc-----CceEEEEcCCc----hHHHHH
Q 011867 304 VTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVAE-----MFEIIVFTASE----SVYAEK 374 (476)
Q Consensus 304 ktLVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls~-----~yEIvIfTas~----~~YA~~ 374 (476)
+.++|||||||+++.. .-|++.+||+.+.. ...+++.|... +.+++.
T Consensus 1 ~~~ifD~DGvL~~g~~------------------------~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~ 56 (321)
T TIGR01456 1 FGFAFDIDGVLFRGKK------------------------PIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEE 56 (321)
T ss_pred CEEEEeCcCceECCcc------------------------ccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHH
Confidence 3689999999998742 47999999999995 88899999764 456776
Q ss_pred HHHHhC
Q 011867 375 LLDILD 380 (476)
Q Consensus 375 ILd~LD 380 (476)
+.+.++
T Consensus 57 l~~~lG 62 (321)
T TIGR01456 57 ISSLLG 62 (321)
T ss_pred HHHHcC
Confidence 656554
No 127
>COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]
Probab=92.23 E-value=0.27 Score=45.75 Aligned_cols=85 Identities=18% Similarity=0.265 Sum_probs=49.3
Q ss_pred EeeCchHHHHHHHhhcCceEEEEcCCchH--HHHHHHHHhCCCCcee--eEEEecccceecCCcccccccccCCCCCcEE
Q 011867 342 VRQRPFLRTFLERVAEMFEIIVFTASESV--YAEKLLDILDPDRMLI--ARRAYRESCIFSDGSYAKDLTILGVDLARIA 417 (476)
Q Consensus 342 Vk~RPgl~eFL~~Ls~~yEIvIfTas~~~--YA~~ILd~LDP~~k~F--~~rL~Re~c~~~~g~yvKDLs~Lgrdl~~vI 417 (476)
...-||+++-+++|-++|+|+|.|+++.. -.+.-.+.|--.-.++ ++.+++. .|.+-+ -=|
T Consensus 67 L~V~p~aq~v~keLt~~y~vYivtaamdhp~s~~dK~eWl~E~FPFi~~qn~vfCg---------nKnivk------aDi 131 (180)
T COG4502 67 LGVQPFAQTVLKELTSIYNVYIVTAAMDHPKSCEDKGEWLKEKFPFISYQNIVFCG---------NKNIVK------ADI 131 (180)
T ss_pred cCccccHHHHHHHHHhhheEEEEEeccCCchhHHHHHHHHHHHCCCCChhhEEEec---------CCCeEE------eeE
Confidence 45689999999999999999999999433 2333222221100011 2233321 132221 136
Q ss_pred EEECChhhhccCCCceeeeeeecC
Q 011867 418 IIDNSPQVFRLQLDNGIPIKSWFD 441 (476)
Q Consensus 418 IIDDsp~~~~~qp~NgI~I~~f~~ 441 (476)
+|||.|........|-|....-+.
T Consensus 132 lIDDnp~nLE~F~G~kIlFdA~HN 155 (180)
T COG4502 132 LIDDNPLNLENFKGNKILFDAHHN 155 (180)
T ss_pred EecCCchhhhhccCceEEEecccc
Confidence 889888877666666665554443
No 128
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=92.21 E-value=0.22 Score=49.86 Aligned_cols=42 Identities=21% Similarity=0.247 Sum_probs=34.0
Q ss_pred eEEEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cCceEEEEcCCch
Q 011867 304 VTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVA-EMFEIIVFTASES 369 (476)
Q Consensus 304 ktLVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~ 369 (476)
+.+++||||||++.. ..-|++.++|+++. ++..+++.|.+..
T Consensus 3 ~~~~~D~DGtl~~~~------------------------~~~~ga~e~l~~L~~~g~~~~~~Tnns~ 45 (279)
T TIGR01452 3 QGFIFDCDGVLWLGE------------------------RVVPGAPELLDRLARAGKAALFVTNNST 45 (279)
T ss_pred cEEEEeCCCceEcCC------------------------eeCcCHHHHHHHHHHCCCeEEEEeCCCC
Confidence 578999999998752 14588999999999 6789999998653
No 129
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=91.84 E-value=0.23 Score=49.75 Aligned_cols=139 Identities=17% Similarity=0.222 Sum_probs=84.4
Q ss_pred CceEEEEecccccccccCCCCCCCCc-ee------EEE----------e-----cceeeeEEEeeCchHHHHHHHhh-cC
Q 011867 302 KRVTLVLDLDETLVHSSTEPCDDADF-TF------QVF----------F-----NMKEHTVYVRQRPFLRTFLERVA-EM 358 (476)
Q Consensus 302 kKktLVLDLDgTLVhS~~~~~~~~D~-~~------~v~----------~-----~~~~~~~~Vk~RPgl~eFL~~Ls-~~ 358 (476)
....||||+|.||+-+.. ......+ .. +.. + -......+...-|.+.+|++.+. ++
T Consensus 19 ~~tLvvfDiDdTLi~~~~-~lg~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~l~~i~~~~~~~lie~~~~~~i~~lq~~~ 97 (252)
T PF11019_consen 19 QDTLVVFDIDDTLITPKQ-PLGSPAWYQWQLGKLQKRGKSEYKAVECIFEEWLSLIFELRKMELIESDVPNIINSLQNKG 97 (252)
T ss_pred CCeEEEEEcchhhhcCcc-ccCCchhHHHHHHHHHhhccchhhhhhHHHHHHHHHHHhhcceEEcchhHHHHHHHHHHCC
Confidence 457899999999998762 2211111 00 000 0 00111233456789999999999 78
Q ss_pred ceEEEEcCCchHHHHHHHHHhCCCCceeeEEEecc---------------cceecCC-----------cccccccccCCC
Q 011867 359 FEIIVFTASESVYAEKLLDILDPDRMLIARRAYRE---------------SCIFSDG-----------SYAKDLTILGVD 412 (476)
Q Consensus 359 yEIvIfTas~~~YA~~ILd~LDP~~k~F~~rL~Re---------------~c~~~~g-----------~yvKDLs~Lgrd 412 (476)
..++..|+..+.+...-++.|--.+--|+...+++ .-.+.+| ....=|.++|+.
T Consensus 98 ~~v~alT~~~~~~~~~t~~~Lk~~gi~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlft~~~~KG~~L~~fL~~~~~~ 177 (252)
T PF11019_consen 98 IPVIALTARGPNMEDWTLRELKSLGIDFSSSSFPEDGIISFPVFDSALSRAPSFYDGILFTGGQDKGEVLKYFLDKINQS 177 (252)
T ss_pred CcEEEEcCCChhhHHHHHHHHHHCCCCccccccccCcceecccccCCCCCCceeecCeEEeCCCccHHHHHHHHHHcCCC
Confidence 99999999999988888776643322222222111 1112222 112334567999
Q ss_pred CCcEEEEECChhhhc----cCCCceeeeeeecC
Q 011867 413 LARIAIIDNSPQVFR----LQLDNGIPIKSWFD 441 (476)
Q Consensus 413 l~~vIIIDDsp~~~~----~qp~NgI~I~~f~~ 441 (476)
++++|+|||++.... .....+|..-.|+-
T Consensus 178 pk~IIfIDD~~~nl~sv~~a~k~~~I~f~G~~Y 210 (252)
T PF11019_consen 178 PKKIIFIDDNKENLKSVEKACKKSGIDFIGFHY 210 (252)
T ss_pred CCeEEEEeCCHHHHHHHHHHHhhCCCcEEEEEE
Confidence 999999999998652 22347888888853
No 130
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=91.76 E-value=0.24 Score=53.91 Aligned_cols=133 Identities=17% Similarity=0.168 Sum_probs=75.8
Q ss_pred CCCcccCCceEEEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cCceEEEEcCCchHHHH
Q 011867 295 VPKETERKRVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVA-EMFEIIVFTASESVYAE 373 (476)
Q Consensus 295 lpk~~~~kKktLVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~ 373 (476)
++......|++||||||+||.--.. +.|-...+.+.....+- .-=-+++|...++ +++=++|.|-....-|+
T Consensus 214 ~~A~~g~~kK~LVLDLDNTLWGGVI----GedGv~GI~Ls~~~~G~---~fk~fQ~~Ik~l~kqGVlLav~SKN~~~da~ 286 (574)
T COG3882 214 LAAMSGKSKKALVLDLDNTLWGGVI----GEDGVDGIRLSNSAEGE---AFKTFQNFIKGLKKQGVLLAVCSKNTEKDAK 286 (574)
T ss_pred HHHhhCcccceEEEecCCccccccc----ccccccceeecCCCCch---hHHHHHHHHHHHHhccEEEEEecCCchhhHH
Confidence 3333446789999999999965432 12221112211100000 0012566777777 78889999999999998
Q ss_pred HHHHHhCCCCceeeEEEecccceec------CC-cccccccccCCCCCcEEEEECChhhhccCCCce-eeeeeec
Q 011867 374 KLLDILDPDRMLIARRAYRESCIFS------DG-SYAKDLTILGVDLARIAIIDNSPQVFRLQLDNG-IPIKSWF 440 (476)
Q Consensus 374 ~ILd~LDP~~k~F~~rL~Re~c~~~------~g-~yvKDLs~Lgrdl~~vIIIDDsp~~~~~qp~Ng-I~I~~f~ 440 (476)
.+...- |. ..|--++-... ++ +..|=.++||..+.-.|+|||.|..-..-..++ +.+.+|-
T Consensus 287 evF~kh-p~-----MiLkeedfa~~~iNW~~K~eNirkIAkklNlg~dSmvFiDD~p~ErE~vk~~~~v~Vi~~~ 355 (574)
T COG3882 287 EVFRKH-PD-----MILKEEDFAVFQINWDPKAENIRKIAKKLNLGLDSMVFIDDNPAERELVKRELPVSVIEFP 355 (574)
T ss_pred HHHhhC-CC-----eEeeHhhhhhheecCCcchhhHHHHHHHhCCCccceEEecCCHHHHHHHHhcCceeeccCC
Confidence 887652 11 11111221111 11 233445678899999999999998764433333 4455543
No 131
>PLN02887 hydrolase family protein
Probab=91.73 E-value=0.37 Score=53.85 Aligned_cols=59 Identities=17% Similarity=0.191 Sum_probs=48.2
Q ss_pred CCceEEEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHh
Q 011867 301 RKRVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDIL 379 (476)
Q Consensus 301 ~kKktLVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~L 379 (476)
.+.|.+++||||||+++.. ..-|...+-|+++. ++..++|.|.-....+..+++.|
T Consensus 306 ~~iKLIa~DLDGTLLn~d~-----------------------~Is~~t~eAI~kl~ekGi~~vIATGR~~~~i~~~l~~L 362 (580)
T PLN02887 306 PKFSYIFCDMDGTLLNSKS-----------------------QISETNAKALKEALSRGVKVVIATGKARPAVIDILKMV 362 (580)
T ss_pred cCccEEEEeCCCCCCCCCC-----------------------ccCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh
Confidence 4567899999999998632 14566778888888 78999999999999999999988
Q ss_pred CCC
Q 011867 380 DPD 382 (476)
Q Consensus 380 DP~ 382 (476)
+..
T Consensus 363 ~l~ 365 (580)
T PLN02887 363 DLA 365 (580)
T ss_pred Ccc
Confidence 753
No 132
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=91.36 E-value=0.3 Score=45.67 Aligned_cols=84 Identities=24% Similarity=0.241 Sum_probs=58.4
Q ss_pred eeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHhCCCCceeeEEEec-ccceec---CCc------c---c-cccc
Q 011867 343 RQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDILDPDRMLIARRAYR-ESCIFS---DGS------Y---A-KDLT 407 (476)
Q Consensus 343 k~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~LDP~~k~F~~rL~R-e~c~~~---~g~------y---v-KDLs 407 (476)
..+|++.++|+.+. +++.++|.|++...+++++++.++-.. +|..++.. ++-.+. .+. . + .-+.
T Consensus 87 ~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~-~~~~~l~~~~~g~~~g~~~~~~~~g~~K~~~l~~~~~ 165 (202)
T TIGR01490 87 ILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDN-AIGTRLEESEDGIYTGNIDGNNCKGEGKVHALAELLA 165 (202)
T ss_pred hccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcc-eEecceEEcCCCEEeCCccCCCCCChHHHHHHHHHHH
Confidence 47999999999998 679999999999999999999998765 66665432 210111 000 0 1 1122
Q ss_pred ccCCCCCcEEEEECChhhhc
Q 011867 408 ILGVDLARIAIIDNSPQVFR 427 (476)
Q Consensus 408 ~Lgrdl~~vIIIDDsp~~~~ 427 (476)
..+.++++++.+-|++.-..
T Consensus 166 ~~~~~~~~~~~~gDs~~D~~ 185 (202)
T TIGR01490 166 EEQIDLKDSYAYGDSISDLP 185 (202)
T ss_pred HcCCCHHHcEeeeCCcccHH
Confidence 34667788888888887543
No 133
>PLN02423 phosphomannomutase
Probab=90.86 E-value=0.56 Score=46.40 Aligned_cols=54 Identities=20% Similarity=0.318 Sum_probs=37.5
Q ss_pred CceEEEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhhcCceEEEEcCCchHHHHHHHHHhCC
Q 011867 302 KRVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVAEMFEIIVFTASESVYAEKLLDILDP 381 (476)
Q Consensus 302 kKktLVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls~~yEIvIfTas~~~YA~~ILd~LDP 381 (476)
.|..+++||||||+++.. .+-|...+-|+++.+...++|.|..... .+.+.+.+
T Consensus 6 ~~~i~~~D~DGTLl~~~~-----------------------~i~~~~~~ai~~l~~~i~fviaTGR~~~---~~~~~~~~ 59 (245)
T PLN02423 6 PGVIALFDVDGTLTAPRK-----------------------EATPEMLEFMKELRKVVTVGVVGGSDLS---KISEQLGK 59 (245)
T ss_pred cceEEEEeccCCCcCCCC-----------------------cCCHHHHHHHHHHHhCCEEEEECCcCHH---HHHHHhcc
Confidence 345666999999997632 1457778889999977888888876433 44444444
No 134
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=90.77 E-value=0.35 Score=48.14 Aligned_cols=48 Identities=15% Similarity=0.135 Sum_probs=36.0
Q ss_pred eEEEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cCceEEEEcCCchHH
Q 011867 304 VTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVA-EMFEIIVFTASESVY 371 (476)
Q Consensus 304 ktLVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~Y 371 (476)
++++||+||||++..... -..-|+..++|+++. +...+++.|.....-
T Consensus 2 k~i~~D~DGtl~~~~~~~--------------------~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~ 50 (257)
T TIGR01458 2 KGVLLDISGVLYISDAKS--------------------GVAVPGSQEAVKRLRGASVKVRFVTNTTKES 50 (257)
T ss_pred CEEEEeCCCeEEeCCCcc--------------------cCcCCCHHHHHHHHHHCCCeEEEEECCCCCC
Confidence 478999999998763100 004689999999999 679999999765543
No 135
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=90.54 E-value=0.58 Score=46.87 Aligned_cols=62 Identities=18% Similarity=0.106 Sum_probs=45.0
Q ss_pred CCceEEEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhhc--CceEEEEcCCchHHHHHHHHH
Q 011867 301 RKRVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVAE--MFEIIVFTASESVYAEKLLDI 378 (476)
Q Consensus 301 ~kKktLVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls~--~yEIvIfTas~~~YA~~ILd~ 378 (476)
.++.++++|+||||+.....+. ....-|.+.+-|+.|.+ ...++|.|.....-+..++..
T Consensus 12 ~~~~li~~D~DGTLl~~~~~p~------------------~~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~ 73 (266)
T PRK10187 12 SANYAWFFDLDGTLAEIKPHPD------------------QVVVPDNILQGLQLLATANDGALALISGRSMVELDALAKP 73 (266)
T ss_pred CCCEEEEEecCCCCCCCCCCcc------------------cccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCc
Confidence 4468899999999997532111 01245788888999985 578999999988888877765
Q ss_pred hC
Q 011867 379 LD 380 (476)
Q Consensus 379 LD 380 (476)
++
T Consensus 74 ~~ 75 (266)
T PRK10187 74 YR 75 (266)
T ss_pred cc
Confidence 43
No 136
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=90.08 E-value=0.52 Score=46.59 Aligned_cols=54 Identities=19% Similarity=0.281 Sum_probs=38.9
Q ss_pred eEEEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cCceEEEEcCC---chHHHHHHHHHh
Q 011867 304 VTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVA-EMFEIIVFTAS---ESVYAEKLLDIL 379 (476)
Q Consensus 304 ktLVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls-~~yEIvIfTas---~~~YA~~ILd~L 379 (476)
+.++|||||||++... .-|+..++|+++. ++..+++.|.+ ...-+...++.+
T Consensus 2 ~~~~~D~DGtl~~~~~------------------------~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~ 57 (249)
T TIGR01457 2 KGYLIDLDGTMYKGKE------------------------RIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASF 57 (249)
T ss_pred CEEEEeCCCceEcCCe------------------------eCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHc
Confidence 4789999999987521 2478999999999 67999999953 344444555555
Q ss_pred CC
Q 011867 380 DP 381 (476)
Q Consensus 380 DP 381 (476)
+.
T Consensus 58 g~ 59 (249)
T TIGR01457 58 DI 59 (249)
T ss_pred CC
Confidence 53
No 137
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=89.75 E-value=0.66 Score=45.43 Aligned_cols=60 Identities=25% Similarity=0.155 Sum_probs=43.5
Q ss_pred ceEEEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhhc-CceEEEEcCCchHHHHHHHHHhCC
Q 011867 303 RVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVAE-MFEIIVFTASESVYAEKLLDILDP 381 (476)
Q Consensus 303 KktLVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls~-~yEIvIfTas~~~YA~~ILd~LDP 381 (476)
++.++.||||||+++... + -...|.+.+.++.+.+ .-.+++.|..+..-+.++++.+.+
T Consensus 1 ~~li~tDlDGTLl~~~~~-----~---------------~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~ 60 (249)
T TIGR01485 1 RLLLVSDLDNTLVDHTDG-----D---------------NQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPL 60 (249)
T ss_pred CeEEEEcCCCcCcCCCCC-----C---------------hHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCC
Confidence 357888999999974210 0 1246888888888874 448888888888888888877665
Q ss_pred C
Q 011867 382 D 382 (476)
Q Consensus 382 ~ 382 (476)
.
T Consensus 61 ~ 61 (249)
T TIGR01485 61 L 61 (249)
T ss_pred C
Confidence 4
No 138
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=88.43 E-value=0.42 Score=47.49 Aligned_cols=92 Identities=12% Similarity=0.014 Sum_probs=52.9
Q ss_pred CCceEEEEecccccccccC---CCCCC-CCceeEEEecceeeeEEEeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHH
Q 011867 301 RKRVTLVLDLDETLVHSST---EPCDD-ADFTFQVFFNMKEHTVYVRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKL 375 (476)
Q Consensus 301 ~kKktLVLDLDgTLVhS~~---~~~~~-~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~I 375 (476)
.+|..+|||+|+|++.... .+... ..+.. ..+..-...-.-..-|++.+|++++. .+++|++.|.-.....+..
T Consensus 75 dg~~A~V~DIDET~LsN~py~~~~~~g~~~~~~-~~~~~wv~~~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T 153 (229)
T TIGR01675 75 DGMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDP-TAFWLWLGKGAAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNAT 153 (229)
T ss_pred CCCcEEEEccccccccCHHHHHHhccCCCcCCH-HHHHHHHHcCCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHH
Confidence 5788999999999998752 01000 00100 00000000111246899999999997 7899999999987774444
Q ss_pred HHHhCCCCc-eeeEEEecc
Q 011867 376 LDILDPDRM-LIARRAYRE 393 (476)
Q Consensus 376 Ld~LDP~~k-~F~~rL~Re 393 (476)
++.|.-.+- -+.+.+.|.
T Consensus 154 ~~nL~~~G~~~~~~LiLR~ 172 (229)
T TIGR01675 154 LDNLINAGFTGWKHLILRG 172 (229)
T ss_pred HHHHHHcCCCCcCeeeecC
Confidence 444432220 024555564
No 139
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=88.11 E-value=1.1 Score=49.68 Aligned_cols=87 Identities=14% Similarity=0.113 Sum_probs=59.3
Q ss_pred EEEeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHhCCCCceeeEEEecccceecCCcccccccccCCCCCcEEE
Q 011867 340 VYVRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDILDPDRMLIARRAYRESCIFSDGSYAKDLTILGVDLARIAI 418 (476)
Q Consensus 340 ~~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~LDP~~k~F~~rL~Re~c~~~~g~yvKDLs~Lgrdl~~vII 418 (476)
+.-..||++.++|++|. ++++++|.|...+.+|+.+++.++.. +|. +-....+...++.+ ....++|++
T Consensus 402 ~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~--~~~-----~~~p~~K~~~v~~l---~~~~~~v~~ 471 (562)
T TIGR01511 402 LEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN--VRA-----EVLPDDKAALIKEL---QEKGRVVAM 471 (562)
T ss_pred ecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc--EEc-----cCChHHHHHHHHHH---HHcCCEEEE
Confidence 34568999999999998 57999999999999999999999774 222 11111222333333 345678999
Q ss_pred EECChhhhccCCCceeee
Q 011867 419 IDNSPQVFRLQLDNGIPI 436 (476)
Q Consensus 419 IDDsp~~~~~qp~NgI~I 436 (476)
|-|...-...-...++.|
T Consensus 472 VGDg~nD~~al~~A~vgi 489 (562)
T TIGR01511 472 VGDGINDAPALAQADVGI 489 (562)
T ss_pred EeCCCccHHHHhhCCEEE
Confidence 999877543322344443
No 140
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=87.85 E-value=0.84 Score=46.40 Aligned_cols=54 Identities=20% Similarity=0.181 Sum_probs=40.9
Q ss_pred CCceEEEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHH
Q 011867 301 RKRVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDI 378 (476)
Q Consensus 301 ~kKktLVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~ 378 (476)
.+..+++|||||||++-.. .=||+.+||+++. +.-.+++-|.+...-.+.+..+
T Consensus 6 ~~y~~~l~DlDGvl~~G~~------------------------~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~ 60 (269)
T COG0647 6 DKYDGFLFDLDGVLYRGNE------------------------AIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAAR 60 (269)
T ss_pred hhcCEEEEcCcCceEeCCc------------------------cCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHH
Confidence 3456799999999987632 5699999999999 5588999998876544444333
No 141
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=87.41 E-value=0.83 Score=44.74 Aligned_cols=51 Identities=25% Similarity=0.344 Sum_probs=37.9
Q ss_pred EEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cCceEEEEcCCc----hHHHHHHHHHhC
Q 011867 306 LVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVA-EMFEIIVFTASE----SVYAEKLLDILD 380 (476)
Q Consensus 306 LVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~----~~YA~~ILd~LD 380 (476)
++||+||||++... .=|++.++|+.+. +.+.+++-|.+. ..+++.+.+.++
T Consensus 1 ~lfD~DGvL~~~~~------------------------~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g 56 (236)
T TIGR01460 1 FLFDIDGVLWLGHK------------------------PIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLG 56 (236)
T ss_pred CEEeCcCccCcCCc------------------------cCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcC
Confidence 48999999998732 2468999999998 569999998444 456666666443
No 142
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=86.66 E-value=1 Score=41.82 Aligned_cols=79 Identities=13% Similarity=0.161 Sum_probs=59.6
Q ss_pred EEEeeCchHHHHHHHhhc-CceEEEEcCCchHHHHHHHHHhCCCCceeeEEEecccceecCC---cccccccccCCCCCc
Q 011867 340 VYVRQRPFLRTFLERVAE-MFEIIVFTASESVYAEKLLDILDPDRMLIARRAYRESCIFSDG---SYAKDLTILGVDLAR 415 (476)
Q Consensus 340 ~~Vk~RPgl~eFL~~Ls~-~yEIvIfTas~~~YA~~ILd~LDP~~k~F~~rL~Re~c~~~~g---~yvKDLs~Lgrdl~~ 415 (476)
..-.+||++.++|++|.+ .+.++|.|......|..+.+.++... ..++.+.. .++ .+.+-++.++.+++.
T Consensus 124 ~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~----~~v~a~~~--~kP~~k~~~~~i~~l~~~~~~ 197 (215)
T PF00702_consen 124 LRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD----SIVFARVI--GKPEPKIFLRIIKELQVKPGE 197 (215)
T ss_dssp EEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS----EEEEESHE--TTTHHHHHHHHHHHHTCTGGG
T ss_pred ecCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc----cccccccc--ccccchhHHHHHHHHhcCCCE
Confidence 445689999999999995 59999999999999999999998743 22332211 222 345556667888889
Q ss_pred EEEEECChh
Q 011867 416 IAIIDNSPQ 424 (476)
Q Consensus 416 vIIIDDsp~ 424 (476)
|++|-|...
T Consensus 198 v~~vGDg~n 206 (215)
T PF00702_consen 198 VAMVGDGVN 206 (215)
T ss_dssp EEEEESSGG
T ss_pred EEEEccCHH
Confidence 999999874
No 143
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=86.21 E-value=2 Score=41.75 Aligned_cols=41 Identities=15% Similarity=0.280 Sum_probs=37.1
Q ss_pred EeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHhCCC
Q 011867 342 VRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDILDPD 382 (476)
Q Consensus 342 Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~LDP~ 382 (476)
+++|||.++|.+++. +...++|-|+|+..+..+++..+--+
T Consensus 72 i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgk 113 (220)
T COG4359 72 IKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGK 113 (220)
T ss_pred cccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccc
Confidence 789999999999999 56899999999999999999887644
No 144
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=84.49 E-value=3.2 Score=43.67 Aligned_cols=55 Identities=22% Similarity=0.246 Sum_probs=46.6
Q ss_pred eeEEEeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHh-C------CCCceeeEEEec
Q 011867 338 HTVYVRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDIL-D------PDRMLIARRAYR 392 (476)
Q Consensus 338 ~~~~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~L-D------P~~k~F~~rL~R 392 (476)
...||.+-|++.++|+++. +...+.|.|++...|++.+++.+ + .+..+|..++..
T Consensus 179 p~~yv~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~ 241 (343)
T TIGR02244 179 PEKYVLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIVD 241 (343)
T ss_pred HHHHhccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCcEEEeC
Confidence 3457888999999999998 67999999999999999999997 5 345688876653
No 145
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=83.34 E-value=0.75 Score=46.33 Aligned_cols=90 Identities=18% Similarity=0.134 Sum_probs=46.8
Q ss_pred CCceEEEEecccccccccCCCCCCCCceeEEEecceeeeE-----EEeeCchHHHHHHHhhcCce-EEEEcCCchHH-HH
Q 011867 301 RKRVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTV-----YVRQRPFLRTFLERVAEMFE-IIVFTASESVY-AE 373 (476)
Q Consensus 301 ~kKktLVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~-----~Vk~RPgl~eFL~~Ls~~yE-IvIfTas~~~Y-A~ 373 (476)
.+++.+|+|||||.++-+--.. ........|....-.. .-+.=||+.|||+++-++-- |.--|...+.. .+
T Consensus 77 ~K~~aVvlDlDETvLdNs~Yqg--y~v~nnk~f~pe~Wd~wV~a~~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~ 154 (274)
T COG2503 77 GKKKAVVLDLDETVLDNSAYQG--YQVLNNKGFTPETWDKWVQAKKSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKD 154 (274)
T ss_pred CCCceEEEecchHhhcCccccc--hhhhcCCCCCccchHHHHhhcccccCccHHHHHHHHHhcCcEEEEEeccchhcccc
Confidence 4566999999999998753110 0000000011111111 23457999999999996644 44444444444 33
Q ss_pred HHH---HHhCCCCceeeEEEec
Q 011867 374 KLL---DILDPDRMLIARRAYR 392 (476)
Q Consensus 374 ~IL---d~LDP~~k~F~~rL~R 392 (476)
.-+ ..++..+..-.+.|+.
T Consensus 155 ~T~~nLk~~g~~~~~~~~~llk 176 (274)
T COG2503 155 GTIENLKSEGLPQVLESHLLLK 176 (274)
T ss_pred hhHHHHHHcCcccccccceEEe
Confidence 333 3444433344455553
No 146
>PLN02151 trehalose-phosphatase
Probab=83.21 E-value=2.2 Score=45.12 Aligned_cols=59 Identities=15% Similarity=0.209 Sum_probs=45.8
Q ss_pred CCceEEEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhhcCceEEEEcCCchHHHHHHHH
Q 011867 301 RKRVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVAEMFEIIVFTASESVYAEKLLD 377 (476)
Q Consensus 301 ~kKktLVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls~~yEIvIfTas~~~YA~~ILd 377 (476)
.++..|+||+||||+--... .-.+..-|.+.+-|+.|.+.+.++|.|.-...-++.++.
T Consensus 96 ~~~~ll~lDyDGTL~PIv~~------------------P~~A~~~~~~~~aL~~La~~~~vaIvSGR~~~~l~~~~~ 154 (354)
T PLN02151 96 GKQIVMFLDYDGTLSPIVDD------------------PDRAFMSKKMRNTVRKLAKCFPTAIVSGRCREKVSSFVK 154 (354)
T ss_pred CCceEEEEecCccCCCCCCC------------------cccccCCHHHHHHHHHHhcCCCEEEEECCCHHHHHHHcC
Confidence 46788999999999843211 112346799999999999889999999998888887765
No 147
>PLN03017 trehalose-phosphatase
Probab=82.73 E-value=2.2 Score=45.21 Aligned_cols=60 Identities=20% Similarity=0.288 Sum_probs=44.9
Q ss_pred CCceEEEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhhcCceEEEEcCCchHHHHHHHHH
Q 011867 301 RKRVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVAEMFEIIVFTASESVYAEKLLDI 378 (476)
Q Consensus 301 ~kKktLVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls~~yEIvIfTas~~~YA~~ILd~ 378 (476)
.++..|+||+||||+--...+ + ...+-|.+.+-|++|.+.+.++|.|.-...-+..++..
T Consensus 109 ~k~~llflD~DGTL~Piv~~p----~--------------~a~i~~~~~~aL~~La~~~~vaIvSGR~~~~l~~~~~l 168 (366)
T PLN03017 109 GKQIVMFLDYDGTLSPIVDDP----D--------------KAFMSSKMRRTVKKLAKCFPTAIVTGRCIDKVYNFVKL 168 (366)
T ss_pred CCCeEEEEecCCcCcCCcCCc----c--------------cccCCHHHHHHHHHHhcCCcEEEEeCCCHHHHHHhhcc
Confidence 467888899999999322100 0 11356888999999999999999999998888887543
No 148
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=81.89 E-value=1.2 Score=41.96 Aligned_cols=83 Identities=22% Similarity=0.341 Sum_probs=44.2
Q ss_pred EeeCchHHHHHHHhhcC-ceEEEEcCCchH----HHHHHHHHhCCC--CceeeEEEecccceecCCcccccccccCCCCC
Q 011867 342 VRQRPFLRTFLERVAEM-FEIIVFTASESV----YAEKLLDILDPD--RMLIARRAYRESCIFSDGSYAKDLTILGVDLA 414 (476)
Q Consensus 342 Vk~RPgl~eFL~~Ls~~-yEIvIfTas~~~----YA~~ILd~LDP~--~k~F~~rL~Re~c~~~~g~yvKDLs~Lgrdl~ 414 (476)
...-||+.+.|+.|.+. +++++.|+.... .++.-.+-|+.. ...+...++..+ |. .++.|
T Consensus 72 l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~i~~~~~~~~~~---------K~--~v~~D-- 138 (191)
T PF06941_consen 72 LPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPFIPYDNLIFTGD---------KT--LVGGD-- 138 (191)
T ss_dssp --B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTHHHHCCEEEESS---------GG--GC--S--
T ss_pred CCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCCCchheEEEecC---------CC--eEecc--
Confidence 56779999999999965 587777777554 122222222211 111223333211 22 34444
Q ss_pred cEEEEECChhhhccCCCceeeeeee
Q 011867 415 RIAIIDNSPQVFRLQLDNGIPIKSW 439 (476)
Q Consensus 415 ~vIIIDDsp~~~~~qp~NgI~I~~f 439 (476)
|+|||+|.....-...|+++-=|
T Consensus 139 --vlIDD~~~n~~~~~~~g~~~iLf 161 (191)
T PF06941_consen 139 --VLIDDRPHNLEQFANAGIPVILF 161 (191)
T ss_dssp --EEEESSSHHHSS-SSESSEEEEE
T ss_pred --EEecCChHHHHhccCCCceEEEE
Confidence 79999999887666677655444
No 149
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=80.17 E-value=0.77 Score=43.13 Aligned_cols=15 Identities=40% Similarity=0.620 Sum_probs=13.3
Q ss_pred EEEEecccccccccC
Q 011867 305 TLVLDLDETLVHSST 319 (476)
Q Consensus 305 tLVLDLDgTLVhS~~ 319 (476)
.+||||||||+++..
T Consensus 2 ~viFD~DGTLiDs~~ 16 (197)
T TIGR01548 2 ALVLDMDGVMADVSQ 16 (197)
T ss_pred ceEEecCceEEechH
Confidence 589999999999964
No 150
>PLN02580 trehalose-phosphatase
Probab=79.95 E-value=3.6 Score=43.94 Aligned_cols=60 Identities=20% Similarity=0.273 Sum_probs=47.8
Q ss_pred CCceEEEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhhcCceEEEEcCCchHHHHHHHHH
Q 011867 301 RKRVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVAEMFEIIVFTASESVYAEKLLDI 378 (476)
Q Consensus 301 ~kKktLVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls~~yEIvIfTas~~~YA~~ILd~ 378 (476)
.++..|+||.||||.--... .-.+..-|.+.+-|+.|++.+.++|-|.-...-++.++..
T Consensus 117 ~k~~~LfLDyDGTLaPIv~~------------------Pd~A~~s~~~~~aL~~La~~~~VAIVSGR~~~~L~~~l~~ 176 (384)
T PLN02580 117 GKKIALFLDYDGTLSPIVDD------------------PDRALMSDAMRSAVKNVAKYFPTAIISGRSRDKVYELVGL 176 (384)
T ss_pred cCCeEEEEecCCccCCCCCC------------------cccccCCHHHHHHHHHHhhCCCEEEEeCCCHHHHHHHhCC
Confidence 56788999999999754311 1234567899999999999999999999999888887764
No 151
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=79.29 E-value=3.6 Score=45.54 Aligned_cols=88 Identities=14% Similarity=0.110 Sum_probs=61.4
Q ss_pred EEEeeCchHHHHHHHhh-cC-ceEEEEcCCchHHHHHHHHHhCCCCceeeEEEecccceecCCcccccccccCCCCCcEE
Q 011867 340 VYVRQRPFLRTFLERVA-EM-FEIIVFTASESVYAEKLLDILDPDRMLIARRAYRESCIFSDGSYAKDLTILGVDLARIA 417 (476)
Q Consensus 340 ~~Vk~RPgl~eFL~~Ls-~~-yEIvIfTas~~~YA~~ILd~LDP~~k~F~~rL~Re~c~~~~g~yvKDLs~Lgrdl~~vI 417 (476)
.....||++.+.|++|. ++ ++++|.|...+.+|+.+++.++... +|... . ...+...++.+ +....+|+
T Consensus 381 ~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~-~f~~~-~----p~~K~~~v~~l---~~~~~~v~ 451 (556)
T TIGR01525 381 LRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDE-VHAEL-L----PEDKLAIVKEL---QEEGGVVA 451 (556)
T ss_pred ecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCe-eeccC-C----HHHHHHHHHHH---HHcCCEEE
Confidence 34568999999999998 57 9999999999999999999998864 45421 1 11122333333 34556999
Q ss_pred EEECChhhhccCCCceeee
Q 011867 418 IIDNSPQVFRLQLDNGIPI 436 (476)
Q Consensus 418 IIDDsp~~~~~qp~NgI~I 436 (476)
+|-|...-...-...++-|
T Consensus 452 ~vGDg~nD~~al~~A~vgi 470 (556)
T TIGR01525 452 MVGDGINDAPALAAADVGI 470 (556)
T ss_pred EEECChhHHHHHhhCCEeE
Confidence 9999988554332334433
No 152
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=79.28 E-value=3.2 Score=42.23 Aligned_cols=59 Identities=20% Similarity=0.248 Sum_probs=46.6
Q ss_pred CCceEEEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhhcCce--EEEEcCCchHHHHHHHH
Q 011867 301 RKRVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVAEMFE--IIVFTASESVYAEKLLD 377 (476)
Q Consensus 301 ~kKktLVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls~~yE--IvIfTas~~~YA~~ILd 377 (476)
.+|.+++||.||||.+....+ .-+..=+++.+.|+.|...+. ++|.|.-...-.+..+.
T Consensus 16 a~~~~~~lDyDGTl~~i~~~p------------------~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~ 76 (266)
T COG1877 16 ARKRLLFLDYDGTLTEIVPHP------------------EAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFG 76 (266)
T ss_pred ccceEEEEeccccccccccCc------------------cccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcC
Confidence 678899999999999874322 223456789999999998888 88888888888877776
No 153
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=77.39 E-value=2.4 Score=41.64 Aligned_cols=49 Identities=20% Similarity=0.272 Sum_probs=33.9
Q ss_pred CceEEEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhhcCce--EEEEcCCc
Q 011867 302 KRVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVAEMFE--IIVFTASE 368 (476)
Q Consensus 302 kKktLVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls~~yE--IvIfTas~ 368 (476)
++..|+||+||||+.....+ -..+.-|.+.+.|+.|.+... |+|.|.-.
T Consensus 2 ~~~~l~lD~DGTL~~~~~~p------------------~~~~~~~~~~~~L~~L~~~~~~~v~ivSGR~ 52 (244)
T TIGR00685 2 RKRAFFFDYDGTLSEIVPDP------------------DAAVVSDRLLTILQKLAARPHNAIWIISGRK 52 (244)
T ss_pred CcEEEEEecCccccCCcCCC------------------cccCCCHHHHHHHHHHHhCCCCeEEEEECCC
Confidence 57889999999998642211 112356889999999997654 45666664
No 154
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=77.21 E-value=0.86 Score=45.37 Aligned_cols=41 Identities=20% Similarity=0.412 Sum_probs=35.9
Q ss_pred EeeCchHHHHHHHhhc--CceEEEEcCCchHHHHHHHHHhCCC
Q 011867 342 VRQRPFLRTFLERVAE--MFEIIVFTASESVYAEKLLDILDPD 382 (476)
Q Consensus 342 Vk~RPgl~eFL~~Ls~--~yEIvIfTas~~~YA~~ILd~LDP~ 382 (476)
+..-||+-+.++++++ .||++|-|-+..-..+.+|++.+..
T Consensus 83 iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~ 125 (256)
T KOG3120|consen 83 IPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIH 125 (256)
T ss_pred CCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHH
Confidence 5678999999999983 4899999999999999999987654
No 155
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=77.18 E-value=3.7 Score=46.92 Aligned_cols=61 Identities=26% Similarity=0.339 Sum_probs=45.7
Q ss_pred CCceEEEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhhc--CceEEEEcCCchHHHHHHHHH
Q 011867 301 RKRVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVAE--MFEIIVFTASESVYAEKLLDI 378 (476)
Q Consensus 301 ~kKktLVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls~--~yEIvIfTas~~~YA~~ILd~ 378 (476)
.++++++||+||||+.....+. .....|.+.+.|+.|.+ ...|+|.|.-.....+.++..
T Consensus 490 ~~~rLi~~D~DGTL~~~~~~~~------------------~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~ 551 (726)
T PRK14501 490 ASRRLLLLDYDGTLVPFAPDPE------------------LAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGD 551 (726)
T ss_pred ccceEEEEecCccccCCCCCcc------------------cCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCC
Confidence 5678999999999996421110 11245788999999996 789999999998888877654
Q ss_pred h
Q 011867 379 L 379 (476)
Q Consensus 379 L 379 (476)
+
T Consensus 552 ~ 552 (726)
T PRK14501 552 L 552 (726)
T ss_pred C
Confidence 4
No 156
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=76.93 E-value=3.2 Score=40.09 Aligned_cols=54 Identities=19% Similarity=0.221 Sum_probs=37.6
Q ss_pred EEEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhhcCceEEEEcCCchHHHHHHHHHhCCC
Q 011867 305 TLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVAEMFEIIVFTASESVYAEKLLDILDPD 382 (476)
Q Consensus 305 tLVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls~~yEIvIfTas~~~YA~~ILd~LDP~ 382 (476)
++++||||||++.... +.|.. +-++...++..++|.|.....-+..++..++..
T Consensus 1 li~~DlDgTLl~~~~~-----------------------~~~~~-~~~~~~~~gi~~viaTGR~~~~v~~~~~~l~l~ 54 (236)
T TIGR02471 1 LIITDLDNTLLGDDEG-----------------------LASFV-ELLRGSGDAVGFGIATGRSVESAKSRYAKLNLP 54 (236)
T ss_pred CeEEeccccccCCHHH-----------------------HHHHH-HHHHhcCCCceEEEEeCCCHHHHHHHHHhCCCC
Confidence 3688999999985210 22322 555533467788899999999999998888653
No 157
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=76.79 E-value=1.4 Score=41.61 Aligned_cols=16 Identities=38% Similarity=0.677 Sum_probs=14.0
Q ss_pred eEEEEecccccccccC
Q 011867 304 VTLVLDLDETLVHSST 319 (476)
Q Consensus 304 ktLVLDLDgTLVhS~~ 319 (476)
++++|||||||+++..
T Consensus 3 ~~viFDlDGTL~ds~~ 18 (221)
T TIGR02253 3 KAIFFDLDDTLIDTSG 18 (221)
T ss_pred eEEEEeCCCCCcCCCC
Confidence 5899999999999853
No 158
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=76.77 E-value=1.9 Score=43.22 Aligned_cols=96 Identities=10% Similarity=-0.007 Sum_probs=70.0
Q ss_pred EEeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHhCCCCceeeEEEecccceecCC---cccccccccCCCCCcE
Q 011867 341 YVRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDILDPDRMLIARRAYRESCIFSDG---SYAKDLTILGVDLARI 416 (476)
Q Consensus 341 ~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~LDP~~k~F~~rL~Re~c~~~~g---~yvKDLs~Lgrdl~~v 416 (476)
+....|-+ ++|+.+. +.+.|.|.|....++= .++..++-. .+|+..+..-.....|+ .|.+.|.+++..|+.|
T Consensus 112 ~~~~~~~~-~~lq~lR~~g~~l~iisN~d~r~~-~~l~~~~l~-~~fD~vv~S~e~g~~KPDp~If~~al~~l~v~Pee~ 188 (237)
T KOG3085|consen 112 WKYLDGMQ-ELLQKLRKKGTILGIISNFDDRLR-LLLLPLGLS-AYFDFVVESCEVGLEKPDPRIFQLALERLGVKPEEC 188 (237)
T ss_pred ceeccHHH-HHHHHHHhCCeEEEEecCCcHHHH-HHhhccCHH-HhhhhhhhhhhhccCCCChHHHHHHHHHhCCChHHe
Confidence 34455555 9999999 7789999999988776 777777766 48888885433333443 7899999999999999
Q ss_pred EEEECChhh-hccCCCceeeeeee
Q 011867 417 AIIDNSPQV-FRLQLDNGIPIKSW 439 (476)
Q Consensus 417 IIIDDsp~~-~~~qp~NgI~I~~f 439 (476)
|.|||...+ +.....=|+.---|
T Consensus 189 vhIgD~l~nD~~gA~~~G~~ailv 212 (237)
T KOG3085|consen 189 VHIGDLLENDYEGARNLGWHAILV 212 (237)
T ss_pred EEecCccccccHhHHHcCCEEEEE
Confidence 999999987 54433334433333
No 159
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=75.09 E-value=1.4 Score=41.18 Aligned_cols=16 Identities=19% Similarity=0.148 Sum_probs=13.5
Q ss_pred eEEEEecccccccccC
Q 011867 304 VTLVLDLDETLVHSST 319 (476)
Q Consensus 304 ktLVLDLDgTLVhS~~ 319 (476)
+.|+|||||||+++..
T Consensus 1 k~viFDlDGTL~d~~~ 16 (203)
T TIGR02252 1 KLITFDAVGTLLALKE 16 (203)
T ss_pred CeEEEecCCceeeeCC
Confidence 4789999999999853
No 160
>PRK11590 hypothetical protein; Provisional
Probab=75.05 E-value=1.7 Score=41.72 Aligned_cols=39 Identities=15% Similarity=0.102 Sum_probs=35.0
Q ss_pred EeeCchHHHHH-HHhh-cCceEEEEcCCchHHHHHHHHHhC
Q 011867 342 VRQRPFLRTFL-ERVA-EMFEIIVFTASESVYAEKLLDILD 380 (476)
Q Consensus 342 Vk~RPgl~eFL-~~Ls-~~yEIvIfTas~~~YA~~ILd~LD 380 (476)
+..+|++.+.| +.+. +++.++|.|++...++++++..+.
T Consensus 94 ~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~ 134 (211)
T PRK11590 94 VTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTP 134 (211)
T ss_pred CcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcc
Confidence 45689999999 5777 689999999999999999999877
No 161
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=74.55 E-value=8.1 Score=38.78 Aligned_cols=57 Identities=21% Similarity=0.166 Sum_probs=40.1
Q ss_pred ceEEEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHhCC
Q 011867 303 RVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDILDP 381 (476)
Q Consensus 303 KktLVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~LDP 381 (476)
.+++.+|||+||+....+.. | +...+.++. ..|+|+..|+-++.-...+-+.|+-
T Consensus 7 ~~lIFtDlD~TLl~~~ye~~-----------------------p-A~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v 62 (274)
T COG3769 7 PLLIFTDLDGTLLPHSYEWQ-----------------------P-AAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGV 62 (274)
T ss_pred ceEEEEcccCcccCCCCCCC-----------------------c-cchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCC
Confidence 35666799999998544322 1 122345555 7899999999988777777788886
Q ss_pred CC
Q 011867 382 DR 383 (476)
Q Consensus 382 ~~ 383 (476)
++
T Consensus 63 ~~ 64 (274)
T COG3769 63 QG 64 (274)
T ss_pred CC
Confidence 64
No 162
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=74.17 E-value=1.8 Score=42.25 Aligned_cols=17 Identities=35% Similarity=0.559 Sum_probs=14.5
Q ss_pred CceEEEEeccccccccc
Q 011867 302 KRVTLVLDLDETLVHSS 318 (476)
Q Consensus 302 kKktLVLDLDgTLVhS~ 318 (476)
+-+.++|||||||+++.
T Consensus 9 ~~k~iiFDlDGTL~D~~ 25 (238)
T PRK10748 9 RISALTFDLDDTLYDNR 25 (238)
T ss_pred CceeEEEcCcccccCCh
Confidence 44689999999999984
No 163
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=72.52 E-value=4.5 Score=41.37 Aligned_cols=91 Identities=10% Similarity=0.075 Sum_probs=49.9
Q ss_pred CceEEEEecccccccccC---CCCCC-CCceeEEEec-ceeeeEEEeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHH
Q 011867 302 KRVTLVLDLDETLVHSST---EPCDD-ADFTFQVFFN-MKEHTVYVRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKL 375 (476)
Q Consensus 302 kKktLVLDLDgTLVhS~~---~~~~~-~D~~~~v~~~-~~~~~~~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~I 375 (476)
++-.+|||+|||++.... .+..+ ..|. +..|. .-...-....=|++.+|++++. .+++|++.|.-....-+.=
T Consensus 100 ~~dA~V~DIDET~LsN~pY~~~~~~g~e~~~-~~~w~~~Wv~~~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT 178 (275)
T TIGR01680 100 EKDTFLFNIDGTALSNIPYYKKHGYGSEKFD-SELYDEEFVNKGEAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVT 178 (275)
T ss_pred CCCEEEEECccccccCHHHHHHhcCCCCcCC-hhhhhHHHHhcccCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHH
Confidence 467999999999996432 00000 1110 00000 0000011234689999999998 7899999999876554444
Q ss_pred HHHhCCCCc-eeeEEEecc
Q 011867 376 LDILDPDRM-LIARRAYRE 393 (476)
Q Consensus 376 Ld~LDP~~k-~F~~rL~Re 393 (476)
++-|-..|- -..+.+.|.
T Consensus 179 ~~NL~kaGy~~~~~LiLR~ 197 (275)
T TIGR01680 179 EANLKKAGYHTWEKLILKD 197 (275)
T ss_pred HHHHHHcCCCCcceeeecC
Confidence 444433331 024445564
No 164
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=72.33 E-value=3.7 Score=40.50 Aligned_cols=65 Identities=15% Similarity=0.160 Sum_probs=40.2
Q ss_pred CCceEEEEecccccccccCC----C-----CCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cCceEEEEcCCchH
Q 011867 301 RKRVTLVLDLDETLVHSSTE----P-----CDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVA-EMFEIIVFTASESV 370 (476)
Q Consensus 301 ~kKktLVLDLDgTLVhS~~~----~-----~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~ 370 (476)
.++..+|||||+||++...- . ....++.- +-.... -..=|+..+|++++. .+++|++-|.-...
T Consensus 70 ~~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~---wv~~~~---~~aip~a~~l~~~~~~~G~~V~~iT~R~~~ 143 (229)
T PF03767_consen 70 DKPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDE---WVASGK---APAIPGALELYNYARSRGVKVFFITGRPES 143 (229)
T ss_dssp TSEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHH---HHHCTG---GEEETTHHHHHHHHHHTTEEEEEEEEEETT
T ss_pred CCCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHH---HHhccc---CcccHHHHHHHHHHHHCCCeEEEEecCCch
Confidence 46889999999999965321 0 00111100 000000 135689999999999 67999999876654
Q ss_pred H
Q 011867 371 Y 371 (476)
Q Consensus 371 Y 371 (476)
.
T Consensus 144 ~ 144 (229)
T PF03767_consen 144 Q 144 (229)
T ss_dssp C
T ss_pred h
Confidence 3
No 165
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=71.23 E-value=5.2 Score=36.59 Aligned_cols=47 Identities=13% Similarity=0.203 Sum_probs=38.4
Q ss_pred eCchHH----HHHHHhh-cCceEEEEcCCchHHHHHHHHHhCCCC-ceeeEEE
Q 011867 344 QRPFLR----TFLERVA-EMFEIIVFTASESVYAEKLLDILDPDR-MLIARRA 390 (476)
Q Consensus 344 ~RPgl~----eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~LDP~~-k~F~~rL 390 (476)
.+|++. +||+.+. +.++++|-|++...+++++++.++... .++..++
T Consensus 86 ~~~~~~~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~ 138 (192)
T PF12710_consen 86 LFPGFIPDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNEL 138 (192)
T ss_dssp HCTTCHTTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEE
T ss_pred cCcCchhhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEee
Confidence 357777 9999986 899999999999999999999888653 3455555
No 166
>PRK11590 hypothetical protein; Provisional
Probab=70.98 E-value=6.2 Score=37.77 Aligned_cols=17 Identities=35% Similarity=0.526 Sum_probs=14.4
Q ss_pred CceEEEEeccccccccc
Q 011867 302 KRVTLVLDLDETLVHSS 318 (476)
Q Consensus 302 kKktLVLDLDgTLVhS~ 318 (476)
+++++|||+||||++..
T Consensus 5 ~~k~~iFD~DGTL~~~d 21 (211)
T PRK11590 5 ERRVVFFDLDGTLHQQD 21 (211)
T ss_pred cceEEEEecCCCCcccc
Confidence 56799999999999654
No 167
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=70.98 E-value=2.2 Score=43.20 Aligned_cols=18 Identities=28% Similarity=0.362 Sum_probs=15.6
Q ss_pred CCceEEEEeccccccccc
Q 011867 301 RKRVTLVLDLDETLVHSS 318 (476)
Q Consensus 301 ~kKktLVLDLDgTLVhS~ 318 (476)
.+-+++||||||||+++.
T Consensus 38 ~~~k~VIFDlDGTLvDS~ 55 (286)
T PLN02779 38 ALPEALLFDCDGVLVETE 55 (286)
T ss_pred cCCcEEEEeCceeEEccc
Confidence 445789999999999997
No 168
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=70.92 E-value=1.8 Score=39.60 Aligned_cols=15 Identities=20% Similarity=0.574 Sum_probs=13.1
Q ss_pred EEEEecccccccccC
Q 011867 305 TLVLDLDETLVHSST 319 (476)
Q Consensus 305 tLVLDLDgTLVhS~~ 319 (476)
.+|||+||||+++..
T Consensus 1 ~iiFD~DGTL~ds~~ 15 (185)
T TIGR01990 1 AVIFDLDGVITDTAE 15 (185)
T ss_pred CeEEcCCCccccChH
Confidence 379999999999964
No 169
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=70.51 E-value=9.6 Score=38.05 Aligned_cols=50 Identities=16% Similarity=0.277 Sum_probs=41.5
Q ss_pred EEeeCchHHHHHHHhh---cCceEEEEcCCchHHHHHHHHHhCCCCceeeEEEe
Q 011867 341 YVRQRPFLRTFLERVA---EMFEIIVFTASESVYAEKLLDILDPDRMLIARRAY 391 (476)
Q Consensus 341 ~Vk~RPgl~eFL~~Ls---~~yEIvIfTas~~~YA~~ILd~LDP~~k~F~~rL~ 391 (476)
.+...||+.+|+++++ ..++++|-|-+..-|.+.+|+.-+... +|+.+++
T Consensus 69 ~ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~-~f~~I~T 121 (234)
T PF06888_consen 69 SIPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRD-CFSEIFT 121 (234)
T ss_pred cCCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCcc-ccceEEe
Confidence 3678999999999994 489999999999999999999888754 4544443
No 170
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=70.42 E-value=2.2 Score=40.16 Aligned_cols=16 Identities=38% Similarity=0.630 Sum_probs=13.9
Q ss_pred eEEEEecccccccccC
Q 011867 304 VTLVLDLDETLVHSST 319 (476)
Q Consensus 304 ktLVLDLDgTLVhS~~ 319 (476)
+.+|||+||||+++..
T Consensus 2 k~viFD~DGTL~d~~~ 17 (224)
T TIGR02254 2 KTLLFDLDDTILDFQA 17 (224)
T ss_pred CEEEEcCcCcccccch
Confidence 5799999999999854
No 171
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=69.52 E-value=6.2 Score=39.10 Aligned_cols=55 Identities=22% Similarity=0.196 Sum_probs=36.5
Q ss_pred CceEEEEecccccc-cccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHH-HhhcCceEEEEcCCchHHHHHHHHHh
Q 011867 302 KRVTLVLDLDETLV-HSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLE-RVAEMFEIIVFTASESVYAEKLLDIL 379 (476)
Q Consensus 302 kKktLVLDLDgTLV-hS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~-~Ls~~yEIvIfTas~~~YA~~ILd~L 379 (476)
++++|+.||||||+ ... ..+.-+.++|+ ......-+++-|.....-+..++...
T Consensus 1 ~~~ll~sDlD~Tl~~~~~------------------------~~~~~l~~~l~~~~~~~~~~v~~TGRs~~~~~~~~~~~ 56 (247)
T PF05116_consen 1 PPRLLASDLDGTLIDGDD------------------------EALARLEELLEQQARPEILFVYVTGRSLESVLRLLREY 56 (247)
T ss_dssp -SEEEEEETBTTTBHCHH------------------------HHHHHHHHHHHHHHCCGEEEEEE-SS-HHHHHHHHHHC
T ss_pred CCEEEEEECCCCCcCCCH------------------------HHHHHHHHHHHHhhCCCceEEEECCCCHHHHHHHHHhC
Confidence 46789999999999 110 02445556666 33356778888888889999998865
Q ss_pred C
Q 011867 380 D 380 (476)
Q Consensus 380 D 380 (476)
.
T Consensus 57 ~ 57 (247)
T PF05116_consen 57 N 57 (247)
T ss_dssp T
T ss_pred C
Confidence 4
No 172
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=69.35 E-value=2.4 Score=39.61 Aligned_cols=15 Identities=33% Similarity=0.379 Sum_probs=13.4
Q ss_pred eEEEEeccccccccc
Q 011867 304 VTLVLDLDETLVHSS 318 (476)
Q Consensus 304 ktLVLDLDgTLVhS~ 318 (476)
+.++||+||||+++.
T Consensus 2 k~viFD~dgTLiD~~ 16 (198)
T TIGR01428 2 KALVFDVYGTLFDVH 16 (198)
T ss_pred cEEEEeCCCcCccHH
Confidence 479999999999975
No 173
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=69.17 E-value=5.8 Score=43.74 Aligned_cols=86 Identities=12% Similarity=0.084 Sum_probs=61.0
Q ss_pred EEEeeCchHHHHHHHhh-cCc-eEEEEcCCchHHHHHHHHHhCCCCceeeEEEecccceecCCcccccccccCCCCCcEE
Q 011867 340 VYVRQRPFLRTFLERVA-EMF-EIIVFTASESVYAEKLLDILDPDRMLIARRAYRESCIFSDGSYAKDLTILGVDLARIA 417 (476)
Q Consensus 340 ~~Vk~RPgl~eFL~~Ls-~~y-EIvIfTas~~~YA~~ILd~LDP~~k~F~~rL~Re~c~~~~g~yvKDLs~Lgrdl~~vI 417 (476)
.....||++.+.|++|. +++ .++|.|+..+.+|+.+++.++..+ +|.... ...+ .+-++.++...++|+
T Consensus 359 ~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~-~f~~~~-----p~~K---~~~i~~l~~~~~~v~ 429 (536)
T TIGR01512 359 LSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDE-VHAELL-----PEDK---LEIVKELREKYGPVA 429 (536)
T ss_pred EeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChh-hhhccC-----cHHH---HHHHHHHHhcCCEEE
Confidence 44568999999999999 578 999999999999999999998865 443221 1111 223344455668999
Q ss_pred EEECChhhhccCCCcee
Q 011867 418 IIDNSPQVFRLQLDNGI 434 (476)
Q Consensus 418 IIDDsp~~~~~qp~NgI 434 (476)
+|-|...-...-...++
T Consensus 430 ~vGDg~nD~~al~~A~v 446 (536)
T TIGR01512 430 MVGDGINDAPALAAADV 446 (536)
T ss_pred EEeCCHHHHHHHHhCCE
Confidence 99999875533223344
No 174
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=68.80 E-value=2.3 Score=38.67 Aligned_cols=13 Identities=38% Similarity=0.519 Sum_probs=12.0
Q ss_pred EEEeccccccccc
Q 011867 306 LVLDLDETLVHSS 318 (476)
Q Consensus 306 LVLDLDgTLVhS~ 318 (476)
|+|||||||+++.
T Consensus 2 viFD~DGTL~D~~ 14 (175)
T TIGR01493 2 MVFDVYGTLVDVH 14 (175)
T ss_pred eEEecCCcCcccH
Confidence 7999999999985
No 175
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=68.16 E-value=2.9 Score=39.46 Aligned_cols=15 Identities=20% Similarity=0.426 Sum_probs=13.4
Q ss_pred eEEEEeccccccccc
Q 011867 304 VTLVLDLDETLVHSS 318 (476)
Q Consensus 304 ktLVLDLDgTLVhS~ 318 (476)
+++||||||||+++.
T Consensus 3 k~viFDldGtL~d~~ 17 (211)
T TIGR02247 3 KAVIFDFGGVLLPSP 17 (211)
T ss_pred eEEEEecCCceecCH
Confidence 589999999999974
No 176
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=67.59 E-value=14 Score=34.90 Aligned_cols=61 Identities=18% Similarity=0.219 Sum_probs=39.3
Q ss_pred EEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHH
Q 011867 306 LVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDI 378 (476)
Q Consensus 306 LVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~ 378 (476)
+|.|+||||--|-... ...++ - +.. +.|||+.++...+. ..|.++=-|+-.-..|...-+.
T Consensus 2 VvsDIDGTiT~SD~~G-----~i~~~--~--G~d---~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~ 63 (157)
T PF08235_consen 2 VVSDIDGTITKSDVLG-----HILPI--L--GKD---WTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSW 63 (157)
T ss_pred EEEeccCCcCccchhh-----hhhhc--c--Cch---hhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHH
Confidence 6889999998873200 00000 0 111 57999999999999 6788877777765555544333
No 177
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=67.08 E-value=13 Score=36.01 Aligned_cols=38 Identities=18% Similarity=0.108 Sum_probs=33.9
Q ss_pred EeeCchHHHHHH-Hhh-cCceEEEEcCCchHHHHHHHHHh
Q 011867 342 VRQRPFLRTFLE-RVA-EMFEIIVFTASESVYAEKLLDIL 379 (476)
Q Consensus 342 Vk~RPgl~eFL~-~Ls-~~yEIvIfTas~~~YA~~ILd~L 379 (476)
+..+|++.+.|+ ++. +++.++|.|++...+++++++..
T Consensus 93 ~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~ 132 (210)
T TIGR01545 93 VTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDS 132 (210)
T ss_pred CCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhc
Confidence 357999999995 788 69999999999999999999774
No 178
>PRK09449 dUMP phosphatase; Provisional
Probab=67.05 E-value=2.9 Score=39.71 Aligned_cols=15 Identities=40% Similarity=0.445 Sum_probs=13.0
Q ss_pred ceEEEEecccccccc
Q 011867 303 RVTLVLDLDETLVHS 317 (476)
Q Consensus 303 KktLVLDLDgTLVhS 317 (476)
-+++||||||||++.
T Consensus 3 ~k~iiFDlDGTLid~ 17 (224)
T PRK09449 3 YDWILFDADETLFHF 17 (224)
T ss_pred ccEEEEcCCCchhcc
Confidence 468999999999974
No 179
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=66.80 E-value=3.3 Score=38.26 Aligned_cols=16 Identities=31% Similarity=0.410 Sum_probs=13.7
Q ss_pred ceEEEEeccccccccc
Q 011867 303 RVTLVLDLDETLVHSS 318 (476)
Q Consensus 303 KktLVLDLDgTLVhS~ 318 (476)
.+++|||+||||++..
T Consensus 4 ~k~viFD~DGTLid~~ 19 (201)
T TIGR01491 4 IKLIIFDLDGTLTDVM 19 (201)
T ss_pred ceEEEEeCCCCCcCCc
Confidence 4689999999999853
No 180
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=66.23 E-value=23 Score=35.75 Aligned_cols=102 Identities=15% Similarity=0.247 Sum_probs=58.9
Q ss_pred EEeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHhC---CCCceeeEEEec-ccc---eecCC---ccccccccc
Q 011867 341 YVRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDILD---PDRMLIARRAYR-ESC---IFSDG---SYAKDLTIL 409 (476)
Q Consensus 341 ~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~LD---P~~k~F~~rL~R-e~c---~~~~g---~yvKDLs~L 409 (476)
.+.+|.|+.+|++.|. ...-+.|||||-....+.+|..-. |+=+.++..+.- +.- .+.+. .|.|+-..+
T Consensus 88 ~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~Nv~VvSN~M~Fd~~g~l~gF~~~lIH~~NKn~~~l 167 (246)
T PF05822_consen 88 DIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPNVKVVSNFMDFDEDGVLVGFKGPLIHTFNKNESAL 167 (246)
T ss_dssp ---B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTTEEEEEE-EEE-TTSBEEEE-SS---TT-HHHHHH
T ss_pred chhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCCeEEEeeeEEECCcceEeecCCCceEEeeCCcccc
Confidence 3679999999999999 558999999999999999998764 222455555542 221 11111 344554433
Q ss_pred --------CCCCCcEEEEECChhhhcc-----CCCceeeeeeecCCC
Q 011867 410 --------GVDLARIAIIDNSPQVFRL-----QLDNGIPIKSWFDDP 443 (476)
Q Consensus 410 --------grdl~~vIIIDDsp~~~~~-----qp~NgI~I~~f~~d~ 443 (476)
-....|||++=|+..-..+ ..+|.|.|. |-+++
T Consensus 168 ~~~~~~~~~~~R~NvlLlGDslgD~~Ma~G~~~~~~~lkIG-FLn~~ 213 (246)
T PF05822_consen 168 EDSPYFKQLKKRTNVLLLGDSLGDLHMADGVPDEENVLKIG-FLNDK 213 (246)
T ss_dssp TTHHHHHCTTT--EEEEEESSSGGGGTTTT-S--SEEEEEE-EE-SS
T ss_pred cCchHHHHhccCCcEEEecCccCChHhhcCCCccccEEEEE-ecccC
Confidence 1356899999999985543 335566654 43333
No 181
>PLN02382 probable sucrose-phosphatase
Probab=66.08 E-value=14 Score=39.61 Aligned_cols=17 Identities=41% Similarity=0.626 Sum_probs=14.6
Q ss_pred CCceEEEEecccccccc
Q 011867 301 RKRVTLVLDLDETLVHS 317 (476)
Q Consensus 301 ~kKktLVLDLDgTLVhS 317 (476)
.+++.|+.||||||+.+
T Consensus 7 ~~~~lI~sDLDGTLL~~ 23 (413)
T PLN02382 7 SPRLMIVSDLDHTMVDH 23 (413)
T ss_pred CCCEEEEEcCCCcCcCC
Confidence 46788999999999975
No 182
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=58.55 E-value=4.6 Score=35.53 Aligned_cols=13 Identities=46% Similarity=0.841 Sum_probs=11.7
Q ss_pred EEEeccccccccc
Q 011867 306 LVLDLDETLVHSS 318 (476)
Q Consensus 306 LVLDLDgTLVhS~ 318 (476)
++||+||||+++.
T Consensus 1 iifD~dgtL~d~~ 13 (176)
T PF13419_consen 1 IIFDLDGTLVDTD 13 (176)
T ss_dssp EEEESBTTTEEHH
T ss_pred cEEECCCCcEeCH
Confidence 6899999999885
No 183
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=58.41 E-value=4.4 Score=36.64 Aligned_cols=15 Identities=40% Similarity=0.729 Sum_probs=12.8
Q ss_pred EEEEecccccccccC
Q 011867 305 TLVLDLDETLVHSST 319 (476)
Q Consensus 305 tLVLDLDgTLVhS~~ 319 (476)
.++|||||||+++..
T Consensus 1 ~vlFDlDgtLv~~~~ 15 (183)
T TIGR01509 1 AILFDLDGVLVDTSS 15 (183)
T ss_pred CeeeccCCceechHH
Confidence 379999999999854
No 184
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=53.73 E-value=21 Score=41.96 Aligned_cols=59 Identities=12% Similarity=0.095 Sum_probs=43.0
Q ss_pred CCceEEEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh--cCceEEEEcCCchHHHHHHHHH
Q 011867 301 RKRVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVA--EMFEIIVFTASESVYAEKLLDI 378 (476)
Q Consensus 301 ~kKktLVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls--~~yEIvIfTas~~~YA~~ILd~ 378 (476)
.+++.|+||+||||+..... -+..-|.+.+-|+.|. +...++|.|.-...-.+.++.-
T Consensus 594 ~~~rlI~LDyDGTLlp~~~~--------------------~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~ 653 (854)
T PLN02205 594 TTTRAILLDYDGTLMPQASI--------------------DKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSP 653 (854)
T ss_pred hcCeEEEEecCCcccCCccc--------------------cCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCC
Confidence 46788999999999954210 1123468888899875 5688888888888888777754
Q ss_pred h
Q 011867 379 L 379 (476)
Q Consensus 379 L 379 (476)
+
T Consensus 654 ~ 654 (854)
T PLN02205 654 C 654 (854)
T ss_pred C
Confidence 4
No 185
>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]
Probab=52.63 E-value=48 Score=30.63 Aligned_cols=121 Identities=15% Similarity=0.077 Sum_probs=67.8
Q ss_pred CceEEEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cCceEEEEcCC-chHHHHHHHHHh
Q 011867 302 KRVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVA-EMFEIIVFTAS-ESVYAEKLLDIL 379 (476)
Q Consensus 302 kKktLVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls-~~yEIvIfTas-~~~YA~~ILd~L 379 (476)
+...++||||.||.-.-..-..+..|. +.+-..+.++.....=|-...-|..|+ +..++++.+.+ .+++|.+.|+.+
T Consensus 4 ~p~~~~fdldytiwP~~vdthl~~pfk-P~k~~~g~~g~e~~fY~Di~rIL~dLk~~GVtl~~ASRt~ap~iA~q~L~~f 82 (144)
T KOG4549|consen 4 KPEAMQFDLDYTIWPRLVDTHLDYPFK-PFKCECGSKGEEMIFYDDIRRILVDLKKLGVTLIHASRTMAPQIASQGLETF 82 (144)
T ss_pred CCceeEEeccceeeeEEEEeccccccc-ccccCcccCcceeeeccchhHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHh
Confidence 346788888888864422111111110 111111223334445677888899999 78999999988 579999999988
Q ss_pred CCCCceeeEEEecccce---ecCC---cccccccc-cCCCCCcEEEEECChh
Q 011867 380 DPDRMLIARRAYRESCI---FSDG---SYAKDLTI-LGVDLARIAIIDNSPQ 424 (476)
Q Consensus 380 DP~~k~F~~rL~Re~c~---~~~g---~yvKDLs~-Lgrdl~~vIIIDDsp~ 424 (476)
--.. -+.-+-.-+... ...| .+.|++.. -+..-++..++||-..
T Consensus 83 kvk~-~Gvlkps~e~ft~~~~g~gsklghfke~~n~s~~~~k~~~~fdDesr 133 (144)
T KOG4549|consen 83 KVKQ-TGVLKPSLEEFTFEAVGDGSKLGHFKEFTNNSNSIEKNKQVFDDESR 133 (144)
T ss_pred ccCc-ccccchhhhcCceeeecCcccchhHHHHhhccCcchhceeeeccccc
Confidence 6432 111111111111 1122 23366543 3566778888888653
No 186
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=48.44 E-value=21 Score=34.66 Aligned_cols=52 Identities=23% Similarity=0.235 Sum_probs=30.8
Q ss_pred EEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhhcCce--EEEEcCCchHHHHHHH
Q 011867 307 VLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVAEMFE--IIVFTASESVYAEKLL 376 (476)
Q Consensus 307 VLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls~~yE--IvIfTas~~~YA~~IL 376 (476)
.||.||||.-....+ ...+.-|.+.+.|+.|+.... |+|.|.-.....+...
T Consensus 1 ~lDyDGTL~p~~~~p------------------~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~~ 54 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDP------------------DAAVPPPELRELLRALAADPNNTVAIVSGRSLDDLERFG 54 (235)
T ss_dssp EEE-TTTSS---S-G------------------GG----HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH-
T ss_pred CcccCCccCCCCCCc------------------cccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHhc
Confidence 489999998653321 123467999999999997766 8888888877744443
No 187
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=45.68 E-value=63 Score=30.26 Aligned_cols=66 Identities=29% Similarity=0.305 Sum_probs=37.9
Q ss_pred eCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHhCCCCceeeEEEecccceecCCcccccccccCCCCCcEEEEECC
Q 011867 344 QRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDILDPDRMLIARRAYRESCIFSDGSYAKDLTILGVDLARIAIIDNS 422 (476)
Q Consensus 344 ~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~LDP~~k~F~~rL~Re~c~~~~g~yvKDLs~Lgrdl~~vIIIDDs 422 (476)
.|-.+.+||+.+. ++-.|++|-|+.+.. .+|+.++...+++ ..++|++
T Consensus 53 ~~~~l~~~L~~~~~~gk~I~~yGA~~kg~--tlln~~g~~~~~I-----------------------------~~vvD~n 101 (160)
T PF08484_consen 53 SKAELREFLEKLKAEGKRIAGYGAGAKGN--TLLNYFGLDNDLI-----------------------------DYVVDDN 101 (160)
T ss_dssp HHHHHHHHHHHHHHTT--EEEE---SHHH--HHHHHHT--TTTS-------------------------------EEES-
T ss_pred HHHHHHHHHHHHHHcCCEEEEECcchHHH--HHHHHhCCCccee-----------------------------EEEEeCC
Confidence 4667788888887 677799999998744 5677777654332 2367888
Q ss_pred hhhh-ccCCCceeeeeeec
Q 011867 423 PQVF-RLQLDNGIPIKSWF 440 (476)
Q Consensus 423 p~~~-~~qp~NgI~I~~f~ 440 (476)
|.+. ++-|..+|||.+..
T Consensus 102 p~K~G~~~PGt~ipI~~p~ 120 (160)
T PF08484_consen 102 PLKQGKYLPGTHIPIVSPE 120 (160)
T ss_dssp GGGTTEE-TTT--EEEEGG
T ss_pred hhhcCcccCCCCCeECCHH
Confidence 8766 45677788887764
No 188
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=44.94 E-value=12 Score=35.17 Aligned_cols=14 Identities=21% Similarity=0.449 Sum_probs=12.5
Q ss_pred EEEEeccccccccc
Q 011867 305 TLVLDLDETLVHSS 318 (476)
Q Consensus 305 tLVLDLDgTLVhS~ 318 (476)
++||||||||++..
T Consensus 2 ~viFDldgvL~d~~ 15 (199)
T PRK09456 2 LYIFDLGNVIVDID 15 (199)
T ss_pred EEEEeCCCccccCc
Confidence 68999999999874
No 189
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=42.98 E-value=13 Score=35.88 Aligned_cols=17 Identities=29% Similarity=0.464 Sum_probs=14.5
Q ss_pred CceEEEEeccccccccc
Q 011867 302 KRVTLVLDLDETLVHSS 318 (476)
Q Consensus 302 kKktLVLDLDgTLVhS~ 318 (476)
-++..+||+||||.+.-
T Consensus 4 ~~~la~FDfDgTLt~~d 20 (210)
T TIGR01545 4 AKRIIFFDLDGTLHQQD 20 (210)
T ss_pred cCcEEEEcCCCCCccCc
Confidence 36789999999999874
No 190
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=42.53 E-value=15 Score=34.60 Aligned_cols=17 Identities=29% Similarity=0.407 Sum_probs=14.4
Q ss_pred CceEEEEeccccccccc
Q 011867 302 KRVTLVLDLDETLVHSS 318 (476)
Q Consensus 302 kKktLVLDLDgTLVhS~ 318 (476)
..+.++||+||||++..
T Consensus 3 ~~k~i~FD~d~TL~d~~ 19 (229)
T COG1011 3 MIKAILFDLDGTLLDFD 19 (229)
T ss_pred ceeEEEEecCCcccccc
Confidence 35789999999999974
No 191
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=42.52 E-value=56 Score=38.24 Aligned_cols=63 Identities=16% Similarity=0.191 Sum_probs=45.1
Q ss_pred CCceEEEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhhc--CceEEEEcCCchHHHHHHHHH
Q 011867 301 RKRVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVAE--MFEIIVFTASESVYAEKLLDI 378 (476)
Q Consensus 301 ~kKktLVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls~--~yEIvIfTas~~~YA~~ILd~ 378 (476)
.++..|+||.||||+.....+. ...-+..-|.+.+-|+.|.. .-.|+|-|.-...-.+.++..
T Consensus 505 a~~rll~LDyDGTL~~~~~~~~---------------~p~~a~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~ 569 (797)
T PLN03063 505 SNNRLLILGFYGTLTEPRNSQI---------------KEMDLGLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGE 569 (797)
T ss_pred ccCeEEEEecCccccCCCCCcc---------------ccccCCCCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCC
Confidence 4678899999999995321110 01123456889999999984 578999998888888887754
No 192
>PRK10671 copA copper exporting ATPase; Provisional
Probab=42.50 E-value=42 Score=39.15 Aligned_cols=84 Identities=12% Similarity=0.103 Sum_probs=59.3
Q ss_pred EeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHhCCCCceeeEEEecccceecCCcccccccccCCCCCcEEEEE
Q 011867 342 VRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDILDPDRMLIARRAYRESCIFSDGSYAKDLTILGVDLARIAIID 420 (476)
Q Consensus 342 Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~LDP~~k~F~~rL~Re~c~~~~g~yvKDLs~Lgrdl~~vIIID 420 (476)
-..||++.+.|+++. +.+.+++.|...+..|+.+++.++... +|.... - ..|. +-++.++...++|++|-
T Consensus 649 d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~-~~~~~~-p----~~K~---~~i~~l~~~~~~v~~vG 719 (834)
T PRK10671 649 DPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDE-VIAGVL-P----DGKA---EAIKRLQSQGRQVAMVG 719 (834)
T ss_pred CcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCE-EEeCCC-H----HHHH---HHHHHHhhcCCEEEEEe
Confidence 367999999999998 679999999999999999999998764 333211 1 1122 23334455567899999
Q ss_pred CChhhhccCCCcee
Q 011867 421 NSPQVFRLQLDNGI 434 (476)
Q Consensus 421 Dsp~~~~~qp~NgI 434 (476)
|...-...-...++
T Consensus 720 Dg~nD~~al~~Agv 733 (834)
T PRK10671 720 DGINDAPALAQADV 733 (834)
T ss_pred CCHHHHHHHHhCCe
Confidence 99875543323444
No 193
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=40.46 E-value=1.4e+02 Score=28.72 Aligned_cols=116 Identities=15% Similarity=0.177 Sum_probs=66.8
Q ss_pred CCceEEEEecccccccccCCCCCCCCceeEEEecceeee-EEEeeCchHHHHHHHh-hcCceEEEEcCCchHHHHHHHHH
Q 011867 301 RKRVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHT-VYVRQRPFLRTFLERV-AEMFEIIVFTASESVYAEKLLDI 378 (476)
Q Consensus 301 ~kKktLVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~-~~Vk~RPgl~eFL~~L-s~~yEIvIfTas~~~YA~~ILd~ 378 (476)
.+-++||+|.||||-+-..- +...+.. .-+..|-|.- ++.+ .-..++.|-|.-....++.=++.
T Consensus 6 ~~IkLli~DVDGvLTDG~ly------------~~~~Gee~KaFnv~DG~G--ik~l~~~Gi~vAIITGr~s~ive~Ra~~ 71 (170)
T COG1778 6 KNIKLLILDVDGVLTDGKLY------------YDENGEEIKAFNVRDGHG--IKLLLKSGIKVAIITGRDSPIVEKRAKD 71 (170)
T ss_pred hhceEEEEeccceeecCeEE------------EcCCCceeeeeeccCcHH--HHHHHHcCCeEEEEeCCCCHHHHHHHHH
Confidence 56789999999999887431 1111110 0111233321 2223 35789999999999999999999
Q ss_pred hCCCCceeeEEEecccceecCCcccccccccCCCCCcEEEEECChhhhccCCCceeeee
Q 011867 379 LDPDRMLIARRAYRESCIFSDGSYAKDLTILGVDLARIAIIDNSPQVFRLQLDNGIPIK 437 (476)
Q Consensus 379 LDP~~k~F~~rL~Re~c~~~~g~yvKDLs~Lgrdl~~vIIIDDsp~~~~~qp~NgI~I~ 437 (476)
|..+. +|..+.-... .|..=+.+++..+++|..|-|.---+..-..-|+++.
T Consensus 72 LGI~~-~~qG~~dK~~------a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a 123 (170)
T COG1778 72 LGIKH-LYQGISDKLA------AFEELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVA 123 (170)
T ss_pred cCCce-eeechHhHHH------HHHHHHHHhCCCHHHhhhhcCccccHHHHHHcCCccc
Confidence 98765 3332221111 1223334678888888888666544432223344443
No 194
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=36.83 E-value=72 Score=38.15 Aligned_cols=70 Identities=19% Similarity=0.270 Sum_probs=48.0
Q ss_pred CCceEEEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhhc--CceEEEEcCCchHHHHHHHHH
Q 011867 301 RKRVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVAE--MFEIIVFTASESVYAEKLLDI 378 (476)
Q Consensus 301 ~kKktLVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls~--~yEIvIfTas~~~YA~~ILd~ 378 (476)
.++.+|+||.||||+.....+...... .....+..-|.+.+.|+.|.. ...|+|.|.-...-.+.++..
T Consensus 589 a~~RLlfLDyDGTLap~~~~P~~~~~~---------~~~~~a~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~ 659 (934)
T PLN03064 589 SNNRLLILGFNATLTEPVDTPGRRGDQ---------IKEMELRLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGE 659 (934)
T ss_pred ccceEEEEecCceeccCCCCccccccc---------ccccccCCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCC
Confidence 467889999999998653222100000 001123455889999999994 588999999999988888866
Q ss_pred h
Q 011867 379 L 379 (476)
Q Consensus 379 L 379 (476)
+
T Consensus 660 ~ 660 (934)
T PLN03064 660 F 660 (934)
T ss_pred C
Confidence 5
No 195
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=33.25 E-value=50 Score=35.64 Aligned_cols=57 Identities=14% Similarity=0.225 Sum_probs=35.1
Q ss_pred CCceEEEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cCceEEEEcCCc
Q 011867 301 RKRVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVA-EMFEIIVFTASE 368 (476)
Q Consensus 301 ~kKktLVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~ 368 (476)
...+.+.||||||||+..... .|......+.+..++.... |+.++ +.|-++|+|...
T Consensus 73 ~~~K~i~FD~dgtlI~t~sg~----------vf~~~~~dw~~l~~~vp~K-lktl~~~g~~l~iftnq~ 130 (422)
T KOG2134|consen 73 GGSKIIMFDYDGTLIDTKSGK----------VFPKGSMDWRILFPEVPSK-LKTLYQDGIKLFIFTNQN 130 (422)
T ss_pred CCcceEEEecCCceeecCCcc----------eeeccCccceeeccccchh-hhhhccCCeEEEEEeccc
Confidence 567789999999999985421 1111222233333444444 56666 789999998654
No 196
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=33.04 E-value=18 Score=32.59 Aligned_cols=13 Identities=31% Similarity=0.572 Sum_probs=11.2
Q ss_pred EEEeccccccccc
Q 011867 306 LVLDLDETLVHSS 318 (476)
Q Consensus 306 LVLDLDgTLVhS~ 318 (476)
++||+||||+...
T Consensus 2 ~~fD~DgTl~~~~ 14 (177)
T TIGR01488 2 AIFDFDGTLTRQD 14 (177)
T ss_pred EEecCccccccch
Confidence 6899999999764
No 197
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=32.57 E-value=24 Score=32.08 Aligned_cols=13 Identities=38% Similarity=0.695 Sum_probs=11.4
Q ss_pred EEEeccccccccc
Q 011867 306 LVLDLDETLVHSS 318 (476)
Q Consensus 306 LVLDLDgTLVhS~ 318 (476)
++||+||||+...
T Consensus 1 v~fD~DGTL~~~~ 13 (192)
T PF12710_consen 1 VIFDFDGTLTDSD 13 (192)
T ss_dssp EEEESBTTTBSSH
T ss_pred eEEecCcCeecCC
Confidence 5899999999874
No 198
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=32.16 E-value=68 Score=31.81 Aligned_cols=85 Identities=11% Similarity=0.174 Sum_probs=59.1
Q ss_pred EeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHhCCCC-ceeeEEE-ecccceecC----------C---ccccc
Q 011867 342 VRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDILDPDR-MLIARRA-YRESCIFSD----------G---SYAKD 405 (476)
Q Consensus 342 Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~LDP~~-k~F~~rL-~Re~c~~~~----------g---~yvKD 405 (476)
..+-||+++|..+|. +...+++.|.+-+..+.++.+.|+... ..+.++| |..+-.+.. | .-++-
T Consensus 87 ~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsggKa~~i~~ 166 (227)
T KOG1615|consen 87 PTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGGKAEVIAL 166 (227)
T ss_pred CccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccccccCCccccCCccHHHHHH
Confidence 346799999999999 789999999999999999999999653 3444444 322211111 1 12333
Q ss_pred ccccCCCCCcEEEEECChhhhc
Q 011867 406 LTILGVDLARIAIIDNSPQVFR 427 (476)
Q Consensus 406 Ls~Lgrdl~~vIIIDDsp~~~~ 427 (476)
|++ +++-+.+++|-|-..-..
T Consensus 167 lrk-~~~~~~~~mvGDGatDle 187 (227)
T KOG1615|consen 167 LRK-NYNYKTIVMVGDGATDLE 187 (227)
T ss_pred HHh-CCChheeEEecCCccccc
Confidence 334 788888999988766443
No 199
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=30.23 E-value=1.6e+02 Score=29.63 Aligned_cols=104 Identities=18% Similarity=0.184 Sum_probs=63.3
Q ss_pred CCceEEEEecccccccccCCCCCCCCceeEEEecceeeeEEEeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHh
Q 011867 301 RKRVTLVLDLDETLVHSSTEPCDDADFTFQVFFNMKEHTVYVRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDIL 379 (476)
Q Consensus 301 ~kKktLVLDLDgTLVhS~~~~~~~~D~~~~v~~~~~~~~~~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~L 379 (476)
..-+.+.+||-|||-.+. ..-|+..|-|++|. ++-.|-..|.++++--..+..+|
T Consensus 5 ~~v~gvLlDlSGtLh~e~------------------------~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL 60 (262)
T KOG3040|consen 5 RAVKGVLLDLSGTLHIED------------------------AAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERL 60 (262)
T ss_pred cccceEEEeccceEeccc------------------------ccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHH
Confidence 345678899999996542 15699999999999 89999899988887666666665
Q ss_pred CCCC----------------ceeeEEEecccceecCCcccccccccCCCCCcEEEEECChhhhccC
Q 011867 380 DPDR----------------MLIARRAYRESCIFSDGSYAKDLTILGVDLARIAIIDNSPQVFRLQ 429 (476)
Q Consensus 380 DP~~----------------k~F~~rL~Re~c~~~~g~yvKDLs~Lgrdl~~vIIIDDsp~~~~~q 429 (476)
..-+ +|+..+-+|.+-... ..-..|..-+.-+--|+|+|-..|..|.+|
T Consensus 61 ~rlgf~v~eeei~tsl~aa~~~~~~~~lrP~l~v~-d~a~~dF~gidTs~pn~VViglape~F~y~ 125 (262)
T KOG3040|consen 61 QRLGFDVSEEEIFTSLPAARQYLEENQLRPYLIVD-DDALEDFDGIDTSDPNCVVIGLAPEGFSYQ 125 (262)
T ss_pred HHhCCCccHHHhcCccHHHHHHHHhcCCCceEEEc-ccchhhCCCccCCCCCeEEEecCcccccHH
Confidence 4322 000111111111000 011233333444456788888888888654
No 200
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=29.88 E-value=26 Score=32.56 Aligned_cols=13 Identities=31% Similarity=0.457 Sum_probs=11.3
Q ss_pred EEEeccccccccc
Q 011867 306 LVLDLDETLVHSS 318 (476)
Q Consensus 306 LVLDLDgTLVhS~ 318 (476)
++||+||||+...
T Consensus 2 a~FD~DgTL~~~~ 14 (202)
T TIGR01490 2 AFFDFDGTLTAKD 14 (202)
T ss_pred eEEccCCCCCCCc
Confidence 6899999999863
No 201
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=27.36 E-value=8.1 Score=37.74 Aligned_cols=89 Identities=7% Similarity=-0.057 Sum_probs=57.0
Q ss_pred CchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHhCCCCceeeEE--EecccceecCC---cccccccccCC-CCCcEE
Q 011867 345 RPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDILDPDRMLIARR--AYRESCIFSDG---SYAKDLTILGV-DLARIA 417 (476)
Q Consensus 345 RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~LDP~~k~F~~r--L~Re~c~~~~g---~yvKDLs~Lgr-dl~~vI 417 (476)
-|++.+.|+.+. +...+ |.|.....|+...+..++... +|... ..++.....|+ .|.+-+++++. +.++++
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~~g~-~~~~i~~~g~~~~~~gKP~~~~~~~~~~~~~~~~~~~~~ 217 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYGAGY-YAELIKQLGGKVIYSGKPYPAIFHKALKECSNIPKNRML 217 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEecccH-HHHHHHHhCCcEecCCCCCHHHHHHHHHHcCCCCcccEE
Confidence 489999999876 46666 669999999987777766543 44421 23333333443 45566777774 467899
Q ss_pred EEECCh-hhhccCCCceee
Q 011867 418 IIDNSP-QVFRLQLDNGIP 435 (476)
Q Consensus 418 IIDDsp-~~~~~qp~NgI~ 435 (476)
+|.|+. .-+..-..+|+.
T Consensus 218 ~vGD~~~~Di~~a~~~G~~ 236 (242)
T TIGR01459 218 MVGDSFYTDILGANRLGID 236 (242)
T ss_pred EECCCcHHHHHHHHHCCCe
Confidence 999995 434333334543
No 202
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=26.90 E-value=1.1e+02 Score=33.61 Aligned_cols=53 Identities=25% Similarity=0.366 Sum_probs=39.9
Q ss_pred eEEEeeCchHHHHHHHhhcC-ceEEEEcCCchHHHHHHHHHh-CC-------CCceeeEEEe
Q 011867 339 TVYVRQRPFLRTFLERVAEM-FEIIVFTASESVYAEKLLDIL-DP-------DRMLIARRAY 391 (476)
Q Consensus 339 ~~~Vk~RPgl~eFL~~Ls~~-yEIvIfTas~~~YA~~ILd~L-DP-------~~k~F~~rL~ 391 (476)
..||.+-|.+..+|+.+.+. -.+.+-|.+...|++.+++.+ ++ ++.+|+-++.
T Consensus 179 ~kYi~k~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv 240 (448)
T PF05761_consen 179 EKYIHKDPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIV 240 (448)
T ss_dssp CCCEE--CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEE
T ss_pred HHHccCCchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEE
Confidence 34777899999999999955 589999999999999999865 45 5678877665
No 203
>TIGR02826 RNR_activ_nrdG3 anaerobic ribonucleoside-triphosphate reductase activating protein. Members of this family represent a set of proteins related to, yet architecturally different from, the activating protein for the glycine radical-containing, oxygen-sensitive ribonucleoside-triphosphate reductase (RNR) as described in model TIGR02491. Members of this family are found paired with members of a similarly divergent set of anaerobic ribonucleoside-triphosphate reductases. Identification of this protein as an RNR activitating protein is partly from pairing with a candidate RNR. It is further supported by our finding that upstream of these operons are examples of a conserved regulatory element (described Rodionov and Gelfand) that is found in nearly all bacteria and that occurs specifically upstream of operons for all three classes of RNR genes.
Probab=25.67 E-value=1.4e+02 Score=27.52 Aligned_cols=63 Identities=21% Similarity=0.215 Sum_probs=39.2
Q ss_pred eeCchHHHHHHHhh-cCceEEEEcCCchH-HHHHHHHHhCCCCceeeEEEecccceecCCcccccccccCCCCCcEEEEE
Q 011867 343 RQRPFLRTFLERVA-EMFEIIVFTASESV-YAEKLLDILDPDRMLIARRAYRESCIFSDGSYAKDLTILGVDLARIAIID 420 (476)
Q Consensus 343 k~RPgl~eFL~~Ls-~~yEIvIfTas~~~-YA~~ILd~LDP~~k~F~~rL~Re~c~~~~g~yvKDLs~Lgrdl~~vIIID 420 (476)
..++.+.++++.+. ..+.+.|+|..... .-+.++..+|-- ..|.|++++..+++.-+|=.++|
T Consensus 72 l~~~~l~~ll~~lk~~Gl~i~l~Tg~~~~~~~~~il~~iD~l---------------~~g~y~~~~~~~~~~~sNQ~~~~ 136 (147)
T TIGR02826 72 WNREALLSLLKIFKEKGLKTCLYTGLEPKDIPLELVQHLDYL---------------KTGRWIHTRGGLGSPTTNQIFID 136 (147)
T ss_pred cCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHhCCEE---------------EEChHHHHcCCCCCCCcCceEEE
Confidence 37789999999999 56999999986542 334455554421 23445555554444334656665
No 204
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=24.87 E-value=41 Score=30.99 Aligned_cols=15 Identities=20% Similarity=0.279 Sum_probs=12.6
Q ss_pred eEEEEeccccccccc
Q 011867 304 VTLVLDLDETLVHSS 318 (476)
Q Consensus 304 ktLVLDLDgTLVhS~ 318 (476)
.+++||.||||....
T Consensus 2 ~~i~fDktGTLt~~~ 16 (215)
T PF00702_consen 2 DAICFDKTGTLTQGK 16 (215)
T ss_dssp SEEEEECCTTTBESH
T ss_pred eEEEEecCCCcccCe
Confidence 479999999998763
No 205
>cd06537 CIDE_N_B CIDE_N domain of CIDE-B proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45 and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=24.58 E-value=1.2e+02 Score=25.75 Aligned_cols=15 Identities=53% Similarity=0.552 Sum_probs=13.5
Q ss_pred ceEEEEecccccccc
Q 011867 303 RVTLVLDLDETLVHS 317 (476)
Q Consensus 303 KktLVLDLDgTLVhS 317 (476)
..+|||+=|||.|++
T Consensus 39 ~~~lvLeeDGT~Vd~ 53 (81)
T cd06537 39 VLTLVLEEDGTAVDS 53 (81)
T ss_pred ceEEEEecCCCEEcc
Confidence 479999999999987
No 206
>cd06539 CIDE_N_A CIDE_N domain of CIDE-A proteins. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins. These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of the CAD/DFF40, ICAD/DFF45, and CIDE nucleases during apoptosis. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, the CIDE proteins were initially characterized as mitochondrial activators of apoptosis. However, strong metabolic phenotypes of mice lacking CIDE-A and CIDE-B indicated that this family may play critical roles in energy balance.
Probab=22.89 E-value=1.2e+02 Score=25.63 Aligned_cols=15 Identities=53% Similarity=0.634 Sum_probs=13.5
Q ss_pred ceEEEEecccccccc
Q 011867 303 RVTLVLDLDETLVHS 317 (476)
Q Consensus 303 KktLVLDLDgTLVhS 317 (476)
..+|||+=|||.|++
T Consensus 40 ~~~lvL~eDGT~Vd~ 54 (78)
T cd06539 40 LVTLVLEEDGTVVDT 54 (78)
T ss_pred CcEEEEeCCCCEEcc
Confidence 578999999999987
No 207
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=22.10 E-value=54 Score=30.80 Aligned_cols=16 Identities=19% Similarity=0.528 Sum_probs=12.1
Q ss_pred ceEEEEeccccccccc
Q 011867 303 RVTLVLDLDETLVHSS 318 (476)
Q Consensus 303 KktLVLDLDgTLVhS~ 318 (476)
|..|.+||||||.+..
T Consensus 2 ~i~I~iDiDgVLad~~ 17 (191)
T PF06941_consen 2 KIRIAIDIDGVLADFN 17 (191)
T ss_dssp -EEEEEESBTTTB-HH
T ss_pred CcEEEEECCCCCcccH
Confidence 4559999999999874
No 208
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=21.83 E-value=2.4e+02 Score=32.77 Aligned_cols=76 Identities=12% Similarity=0.006 Sum_probs=55.8
Q ss_pred eEEEeeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHhCCCCceeeEEEecccceecCCcccccccccCCCCCcEE
Q 011867 339 TVYVRQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLLDILDPDRMLIARRAYRESCIFSDGSYAKDLTILGVDLARIA 417 (476)
Q Consensus 339 ~~~Vk~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~LDP~~k~F~~rL~Re~c~~~~g~yvKDLs~Lgrdl~~vI 417 (476)
.+.-..||++.+.+++|. .++++++.|...+..|..+.+.++... ++ +.....|..+++.|.. ..+|+
T Consensus 564 ~l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~~-~~------~~~p~~K~~~v~~l~~----~~~v~ 632 (741)
T PRK11033 564 ALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGIDF-RA------GLLPEDKVKAVTELNQ----HAPLA 632 (741)
T ss_pred EEecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCe-ec------CCCHHHHHHHHHHHhc----CCCEE
Confidence 344578999999999998 679999999999999999999999752 11 1111124455666642 25799
Q ss_pred EEECChhh
Q 011867 418 IIDNSPQV 425 (476)
Q Consensus 418 IIDDsp~~ 425 (476)
+|-|.-.-
T Consensus 633 mvGDgiND 640 (741)
T PRK11033 633 MVGDGIND 640 (741)
T ss_pred EEECCHHh
Confidence 99887663
No 209
>smart00266 CAD Domains present in proteins implicated in post-mortem DNA fragmentation.
Probab=21.26 E-value=1.2e+02 Score=25.24 Aligned_cols=15 Identities=53% Similarity=0.663 Sum_probs=13.5
Q ss_pred ceEEEEecccccccc
Q 011867 303 RVTLVLDLDETLVHS 317 (476)
Q Consensus 303 KktLVLDLDgTLVhS 317 (476)
..+|+|+=|||.|+.
T Consensus 38 ~~~l~L~eDGT~Vdd 52 (74)
T smart00266 38 PVTLVLEEDGTIVDD 52 (74)
T ss_pred CcEEEEecCCcEEcc
Confidence 578999999999976
No 210
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=21.22 E-value=10 Score=37.77 Aligned_cols=92 Identities=12% Similarity=0.123 Sum_probs=56.3
Q ss_pred chHHHHHHHhh-cCceEEEEcCCchHHHHHHHHHhCCCCceeeEEEe---cccceecCC---cccccccccCCCCCcEEE
Q 011867 346 PFLRTFLERVA-EMFEIIVFTASESVYAEKLLDILDPDRMLIARRAY---RESCIFSDG---SYAKDLTILGVDLARIAI 418 (476)
Q Consensus 346 Pgl~eFL~~Ls-~~yEIvIfTas~~~YA~~ILd~LDP~~k~F~~rL~---Re~c~~~~g---~yvKDLs~Lgrdl~~vII 418 (476)
|++.+-++.+. ..+.++|.|.....++...+..++... +|..... ++.....|+ .|.+-+.++|.+++++++
T Consensus 123 ~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~g~g~-~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~~ 201 (257)
T TIGR01458 123 QILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLALDVGP-FVTALEYATDTKATVVGKPSKTFFLEALRATGCEPEEAVM 201 (257)
T ss_pred HHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCCCchH-HHHHHHHHhCCCceeecCCCHHHHHHHHHHhCCChhhEEE
Confidence 66777777787 567889998888777665555444432 3322111 122122333 456677788999999999
Q ss_pred EECCh-hhhccCCCceeeeee
Q 011867 419 IDNSP-QVFRLQLDNGIPIKS 438 (476)
Q Consensus 419 IDDsp-~~~~~qp~NgI~I~~ 438 (476)
|.|+. .-...-..+|+..--
T Consensus 202 vGD~~~~Di~~a~~~G~~~i~ 222 (257)
T TIGR01458 202 IGDDCRDDVGGAQDCGMRGIQ 222 (257)
T ss_pred ECCCcHHHHHHHHHcCCeEEE
Confidence 99986 444444345555443
No 211
>cd06538 CIDE_N_FSP27 CIDE_N domain of FSP27 proteins. The CIDE-N (cell death-inducing DFF45-like effector, N-terminal) domain is found in the FSP27/CIDE-C protein, which has been identified as a n adipocyte lipid droplet protein that negatively regulates lipolysis and promotes triglyceride accumulation. The CIDE protein family includes 3 members: CIDE-A, CIDE-B, and FSP27(CIDE-C). Based on sequence similarity with DFF40 and DFF45, CIDE proteins were initially characterized as mitochondrial activators of apoptosis. The CIDE-N domain of FSP27 is sufficient to increase apoptosis in vitro when overexpressed.
Probab=20.50 E-value=1.4e+02 Score=25.30 Aligned_cols=15 Identities=47% Similarity=0.417 Sum_probs=13.3
Q ss_pred ceEEEEecccccccc
Q 011867 303 RVTLVLDLDETLVHS 317 (476)
Q Consensus 303 KktLVLDLDgTLVhS 317 (476)
..+|||+-|||.|..
T Consensus 39 ~~~lvL~eDGT~Vd~ 53 (79)
T cd06538 39 ISSLVLDEDGTGVDT 53 (79)
T ss_pred ccEEEEecCCcEEcc
Confidence 378999999999976
No 212
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=20.31 E-value=1.2e+02 Score=29.93 Aligned_cols=90 Identities=18% Similarity=0.193 Sum_probs=60.9
Q ss_pred eeCchHHHHHHHhh-cCceEEEEcCCchHHHHHHH-H---HhCCCCceeeEEEecccceec-CCcccccccccCCCCCcE
Q 011867 343 RQRPFLRTFLERVA-EMFEIIVFTASESVYAEKLL-D---ILDPDRMLIARRAYRESCIFS-DGSYAKDLTILGVDLARI 416 (476)
Q Consensus 343 k~RPgl~eFL~~Ls-~~yEIvIfTas~~~YA~~IL-d---~LDP~~k~F~~rL~Re~c~~~-~g~yvKDLs~Lgrdl~~v 416 (476)
.+-|.+-+++++-. ....++|||++.-. |++++ . ..|..+ +|++.+-...-... ...|.|=+.-+|..+..+
T Consensus 103 hlypDav~~ik~wk~~g~~vyiYSSGSV~-AQkL~Fghs~agdL~~-lfsGyfDttiG~KrE~~SY~kIa~~iGl~p~ei 180 (229)
T COG4229 103 HLYPDAVQAIKRWKALGMRVYIYSSGSVK-AQKLFFGHSDAGDLNS-LFSGYFDTTIGKKRESQSYAKIAGDIGLPPAEI 180 (229)
T ss_pred ccCHhHHHHHHHHHHcCCcEEEEcCCCch-hHHHhhcccccccHHh-hhcceeeccccccccchhHHHHHHhcCCCchhe
Confidence 35689999999888 77999999999754 44433 2 334433 66665532211111 236888889999999999
Q ss_pred EEEECChhhhccCCCcee
Q 011867 417 AIIDNSPQVFRLQLDNGI 434 (476)
Q Consensus 417 IIIDDsp~~~~~qp~NgI 434 (476)
+++-|.|.......+-|+
T Consensus 181 lFLSDn~~EL~AA~~vGl 198 (229)
T COG4229 181 LFLSDNPEELKAAAGVGL 198 (229)
T ss_pred EEecCCHHHHHHHHhcch
Confidence 999999986644434443
Done!